LOCUS       DADMHC010000001        69765 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.001, whole genome shotgun sequence.
ACCESSION   DADMHC010000001 DADMHC010000000
VERSION     DADMHC010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 69765)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 69765)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..69765
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.001"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..260
                     /locus_tag="JNZ57_000001"
     CDS             <1..260
                     /locus_tag="JNZ57_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="prepilin peptidase-dependent pilin"
                     /protein_id="HAY8826362.1"
                     /translation="GLDTCDGGSNGIPSPTTTRYVSAMSVAKGVVSLTGQESLNGLSV
                     VMTPGWDNANGVTGWARNCNIQSDSALQQACEDVFRFDDAN"
     gene            270..1644
                     /gene="gspE"
                     /locus_tag="JNZ57_000002"
                     /pseudo
     CDS             270..1644
                     /gene="gspE"
                     /locus_tag="JNZ57_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414649.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspE"
     gene            1634..2836
                     /gene="hofC"
                     /locus_tag="JNZ57_000003"
     CDS             1634..2836
                     /gene="hofC"
                     /locus_tag="JNZ57_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein transport protein HofC"
                     /protein_id="HAY8826363.1"
                     /translation="MASKQLWRWHGITGDGNAQDGMLWAESRALLLMALQQQMVTPLS
                     LKRIAINSAQWRGDKSAEVIHQLATLLKAGLTLSEGLALLAEQHPSKQWQALLQSLAH
                     DLEQGIAFSNALLPWSEVFPPLYQAMIRTGELTGKLDECCFELARQQKAQRQLTDKVK
                     SALRYPIIILAMAIMVVVAMLHFVLPEFAAIYKTFNTPLPALTQGIMTLADFSGEWSW
                     LLVLFGFLLAIANKLLMRRPTWLIVRQKLLLRIPIMGSLMRGQKLTQIFTILALTQSA
                     GITFLQGVESVRETMRCPYWVQLLTQIQHDISNGHPIWLALKNTGEFSPLCLQLVRTG
                     EASGSLDLMLDNLAHHHRDNTMALADNLAALLEPALLIITGGIIGTLVVAMYLPIFHL
                     GDAMSGMG"
     gene            complement(2871..3914)
                     /gene="guaC"
                     /locus_tag="JNZ57_000004"
     CDS             complement(2871..3914)
                     /gene="guaC"
                     /locus_tag="JNZ57_000004"
                     /EC_number="1.7.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008461816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP reductase"
                     /protein_id="HAY8826364.1"
                     /translation="MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSDQSW
                     SGVPIIAANMDTVGTFSMASALASFDILTAVHKHYSVEEWQAFINNSSADVLKHVMVS
                     TGTSDADFEKTKQILDLNPALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVV
                     TGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVS
                     DGGCTTPGDVAKAFGGGADFVMLGGMLAGHEESGGRIVEENGEKFMLFYGMSSESAMK
                     RHVGGVAEYRAAEGKTVKLPLRGPVENTARDILGGLRSACTYVGASRLKELTKRTTFI
                     RVQEQENRIFNNL"
     gene            4139..4759
                     /gene="coaE"
                     /locus_tag="JNZ57_000005"
     CDS             4139..4759
                     /gene="coaE"
                     /locus_tag="JNZ57_000005"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HAY8826365.1"
                     /translation="MRYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGA
                     PALHAIADHFGANMIAADGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQ
                     ATSPYVLWVVPLLVENSLYKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQA
                     TREARLAVADDVIDNNGAPDAIASDVARLHAHYLQLASQFVSQEKP"
     gene            4759..5502
                     /gene="zapD"
                     /locus_tag="JNZ57_000006"
     CDS             4759..5502
                     /gene="zapD"
                     /locus_tag="JNZ57_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapD"
                     /protein_id="HAY8826366.1"
                     /translation="MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFF
                     RNVSELLDVFERGEVRTELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVL
                     ISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIAS
                     LNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGH
                     KSRFAIRFMPLDSENGQVPERLDFELACC"
     gene            5512..5709
                     /gene="yacG"
                     /locus_tag="JNZ57_000007"
     CDS             5512..5709
                     /gene="yacG"
                     /locus_tag="JNZ57_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HAY8826367.1"
                     /translation="MSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAAEE
                     KRIPSSGDLSESDDWSEEPKQ"
     gene            complement(5816..6205)
                     /gene="mutT"
                     /locus_tag="JNZ57_000008"
     CDS             complement(5816..6205)
                     /gene="mutT"
                     /locus_tag="JNZ57_000008"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase MutT"
                     /protein_id="HAY8826368.1"
                     /translation="MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGE
                     TPEQAVVRELQEEVGITPQHFSLFEKLAYEFPDRHITLWFWLVESWEGVPWGKEGQPG
                     EWMSLVGLNADDFPPANEPVIAKLKRL"
     gene            complement(6265..8970)
                     /gene="secA"
                     /locus_tag="JNZ57_000009"
     CDS             complement(6265..8970)
                     /gene="secA"
                     /locus_tag="JNZ57_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HAY8826369.1"
                     /translation="MLIKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELK
                     GKTAEFRARLEKGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEM
                     RTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPG
                     MPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDE
                     ARTPLIISGPAEDSSEMYKRVNKIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTE
                     RGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALFTRDVDYIVKDGEVI
                     IVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTG
                     TADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQ
                     PVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATNMAG
                     RGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRR
                     IDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVT
                     KAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELLDVSDVSETINSIRED
                     VFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPIAEWLDKEPELHEETLRERIL
                     AQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKD
                     PKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEELEQQRRMEAERLAQMQQ
                     LSHQDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCHGRLQ"
     gene            complement(9032..9544)
                     /gene="secM"
                     /locus_tag="JNZ57_000010"
     CDS             complement(9032..9544)
                     /gene="secM"
                     /locus_tag="JNZ57_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414639.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secA regulator SecM"
                     /protein_id="HAY8826370.1"
                     /translation="MSGILTRWRQFGKRYFWPHLLLGMVAASFGLPALSNAAEPNVPA
                     KATTRNHEPSAKVNFGQLALLEANTRRPNSNYSVDYWHQYAIRTVIRHLSFAMAPQTL
                     PVAEESLPLQAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQ
                     GIRAGPQRLT"
     gene            complement(9775..10692)
                     /gene="lpxC"
                     /locus_tag="JNZ57_000011"
     CDS             complement(9775..10692)
                     /gene="lpxC"
                     /locus_tag="JNZ57_000011"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000595491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HAY8826371.1"
                     /translation="MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDL
                     NPPVDFPADAKSVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIP
                     IMDGSAAPFVYLLLDAGIDELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTID
                     FNHPAIDSSNQRYAMNFSADAFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVV
                     DDYRVLNEDGLRFEDEFVRHKMLDAIGDLFMCGHNIIGAFIAYKSGHALNNKLLQAVL
                     AKQEAWEYVTFQDDAELPLAFKAPSAVLA"
     gene            complement(10793..11944)
                     /gene="ftsZ"
                     /locus_tag="JNZ57_000012"
     CDS             complement(10793..11944)
                     /gene="ftsZ"
                     /locus_tag="JNZ57_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HAY8826372.1"
                     /translation="MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNT
                     DAQALRKTAVGQTIQIGSGITKGLGAGANPEVGRNAADEDRDALRAALEGADMVFIAA
                     GMGGGTGTGAAPVVAEVAKDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSL
                     ITIPNDKLLKVLGRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMS
                     EMGYAMMGSGVASGEDRAEEAAEMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFE
                     TVGNTIRAFASDNATVVIGTSLDPDMNDELRVTVVATGIGMDKRPEITLVTNKQVQQP
                     VMDRYQQHGMAPLTQEQKPVAKVVNDNAPQTAKEPDYLDIPAFLRKQAD"
     gene            complement(12005..13267)
                     /gene="ftsA"
                     /locus_tag="JNZ57_000013"
     CDS             complement(12005..13267)
                     /gene="ftsA"
                     /locus_tag="JNZ57_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017374018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HAY8826373.1"
                     /translation="MIKATDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSR
                     GMDKGGVNDLESVVKCVQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEE
                     EVTQEDVENVVHTAKSVRVRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHL
                     ITCHNDMAKNIVKAVERCGLKVDQLIFAGLASSYSVLTEDERELGVCVVDIGGGTMDI
                     AVYTGGALRHTKVIPYAGNVVTSDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVE
                     VPSVGGRPPRSLQRQTLAEVIEPRYTELLNLVNEEILQLQEKLRQQGVKHHLAAGIVL
                     TGGAAQIEGLAACAQRVFHTQVRIGAPLNITGLTDYAQEPYYSTAVGLLHYGKESHLN
                     GEAEVEKRVTASVGSWIKRLNSWLRKEF"
     gene            complement(13264..14094)
                     /gene="ftsQ"
                     /locus_tag="JNZ57_000014"
     CDS             complement(13264..14094)
                     /gene="ftsQ"
                     /locus_tag="JNZ57_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ"
                     /protein_id="HAY8826374.1"
                     /translation="MSQAALNTRNSEEEVSSRRNNGTRLAGILFLLTVLTTVLVSGWV
                     VLGWMEDAQRLPLSKLVLTGERHYTRNDDIRQSILALGEPGTFMTQDVNIIQTQIEQR
                     LPWIKQVSVRKQWPDELKIHLVEYVPIARWNDQHMVDAEGNTFSVPPDRTSKQVLPML
                     YGPEGSANEVLQGYREMGQMLAKDRFTLKEAAMTARRSWQLTLNNDIKLNLGRGDTMK
                     RLARFVELYPVLQQQAQTDGKRISYVDLRYDSGAAVGWAPLPPEESTQQQNQAQAEQQ
                     "
     gene            complement(14096..15016)
                     /locus_tag="JNZ57_000015"
     CDS             complement(14096..15016)
                     /locus_tag="JNZ57_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HAY8826375.1"
                     /translation="MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE
                     VDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKL
                     LWQGAGLPVAPWVALTRAEFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAE
                     NALQDALRLAFQHDEEVLIEKWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLS
                     DETQYFCPAGLDASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPG
                     MTSHSLVPMAARQAGMSFSQLVVRILELAD"
     gene            complement(15009..16484)
                     /gene="murC"
                     /locus_tag="JNZ57_000016"
     CDS             complement(15009..16484)
                     /gene="murC"
                     /locus_tag="JNZ57_000016"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HAY8826376.1"
                     /translation="MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGY
                     QISGSDLAPNPVTQQLMNLGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEAR
                     IPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAG
                     VHARLGHGRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFL
                     HNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLR
                     QDKEPMRVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFLGTGRRFDFLGEF
                     PLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQPHRFTRTRDLYD
                     DFANVLTQVDTLLMLEVYPAGEAPIPGADSRSLCRTIRGRGKIDPILVPDPAQVAEML
                     APVLTGNDLILVQGAGNIGKIARSLAEIKLKPQTPEEEQHD"
     gene            complement(16538..17605)
                     /gene="murG"
                     /locus_tag="JNZ57_000017"
     CDS             complement(16538..17605)
                     /gene="murG"
                     /locus_tag="JNZ57_000017"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HAY8826377.1"
                     /translation="MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADR
                     MEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGM
                     GGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVGN
                     PVRIDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQS
                     GKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPA
                     LFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERAR
                     AASIPDATERVANEVSRAARA"
     gene            complement(17602..18846)
                     /gene="ftsW"
                     /locus_tag="JNZ57_000018"
     CDS             complement(17602..18846)
                     /gene="ftsW"
                     /locus_tag="JNZ57_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HAY8826378.1"
                     /translation="MRLSLPRLKMPRLPGFSILVWISTALKGWVMGSREKDTDSLIMY
                     DRTLLWLTFGLAAIGFIMVTSASMPIGQRLTNDPFFFAKRDGVYLILAFILAIITLRL
                     PMEFWQRYSATMLLGSIILLMIVLVVGSSVKGASRWIDLGLLRIQPAELTKLSLFCYI
                     ANYLVRKGDEVRNNLRGFLKPMGVILVLAVLLLAQPDLGTVVVVFVTTLAMLFLAGAK
                     LWQFIAIIGMGISAVVLLILAEPYRIRRVTAFWNPWEDPFGSGYQLTQSLMAFGRGEL
                     WGQGLGNSVQKLEYLPEAHTDFIFAIIGEELGYVGVVLALLMVFFVAFRAMSIGRKAL
                     EIDHRFSGFLACSIGIWFSFQALVNVGAAAGMLPTKGLTLPLISYGGSSLLIMSTAIM
                     MLLRIDYETRLEKAQAFVRGSR"
     gene            complement(18846..20162)
                     /gene="murD"
                     /locus_tag="JNZ57_000019"
     CDS             complement(18846..20162)
                     /gene="murD"
                     /locus_tag="JNZ57_000019"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HAY8826379.1"
                     /translation="MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGL
                     DKLPEAVERHTGSLNDEWLMAADLIVASPGIARAHPSLSAAADAGIEIVGDIELFCRE
                     AQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDAECELYVLELS
                     SFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALT
                     MPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAA
                     LALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGL
                     QVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETME
                     QAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG"
     gene            complement(20165..21247)
                     /gene="mraY"
                     /locus_tag="JNZ57_000020"
     CDS             complement(20165..21247)
                     /gene="mraY"
                     /locus_tag="JNZ57_000020"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HAY8826380.1"
                     /translation="MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRM
                     IAHLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVL
                     VVLVGYGVIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATQL
                     VVPFFKDVMPQLGLFYILLAYFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWA
                     TGNMNFASYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGA
                     LGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWP
                     EPRVIVRFWIISLMLVLIGLATLKVR"
     gene            complement(21241..22599)
                     /gene="murF"
                     /locus_tag="JNZ57_000021"
     CDS             complement(21241..22599)
                     /gene="murF"
                     /locus_tag="JNZ57_000021"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HAY8826381.1"
                     /translation="MISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALK
                     GERFDAHDFADQAKAGGAGALLVSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPARV
                     VALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELG
                     ANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMN
                     ADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLP
                     LPGRHNIANALAAAALSMSVGATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYN
                     ANVGSMTAAVQVLAEMPGYRVLVVGDMAELGAESEACHVQVGEAAKAAGIDRVLSVGK
                     QSHAISTASGVGEHFADKTALITRLKSLIAEQQVITILVKGSRSAAMEEVVRALQENG
                     TC"
     gene            complement(22596..24083)
                     /gene="murE"
                     /locus_tag="JNZ57_000022"
     CDS             complement(22596..24083)
                     /gene="murE"
                     /locus_tag="JNZ57_000022"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HAY8826382.1"
                     /translation="MADRNLRDLLAPWVPDAPSRALREMTLDSRVAAAGDLFVAVVGH
                     QADGRRYIPQAIAQGVAAIIAEAKDEATDGEIREMHGVPVIYLSQLNERLSALAGRFY
                     HEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGETSAVMGTVGNGLLGKVIPTENTTG
                     SAVDVQHELAGLVEQGATFCAMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDM
                     EHYEAAKWLLYSEHHCGQAIINADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKV
                     IDVNYHDSGVTIRFSSSWGDGEIESHLIGAFNVSNLLLALATLLALGYPLADLLKTAA
                     RLQPVCGRMEVFTAPGKPTVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDK
                     GKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGMLDAGHAKVMEGRAEAVTC
                     AVMQAKENDVVLVAGKGHEDYQIVGNQRLDYSDRVTVARLLGVIA"
     gene            complement(24070..25836)
                     /locus_tag="JNZ57_000023"
     CDS             complement(24070..25836)
                     /locus_tag="JNZ57_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000642204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase FtsI"
                     /protein_id="HAY8826383.1"
                     /translation="MKAAAKTQKPKRQEEHANFISWRFALLCGCILLALAFLLGRVAW
                     LQVISPDMLVKEGDMRSLRVQQVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAG
                     GISVGDRWKALANALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIH
                     LREESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVI
                     EDISSTDSQAAHNLALSIDERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMA
                     NSPSYNPNNLSGTPKEAMRNRTITDVFEPGSTVKPMVVMTALQRGVVRENSVLNTIPY
                     RINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLG
                     LVGERSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVD
                     PPVPGERVFPESIVRTVVHMMESVALPGGGGVKAAIKGYRIAIKTGTAKKVGPDGRYI
                     NKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTMNIEPD
                     ALTTGDKNEFVINQGEGTGGRS"
     gene            complement(25852..26217)
                     /gene="ftsL"
                     /locus_tag="JNZ57_000024"
     CDS             complement(25852..26217)
                     /gene="ftsL"
                     /locus_tag="JNZ57_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000625658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HAY8826384.1"
                     /translation="MISRVTEALSKVKGSMGSHERHALPGVIGDDLLRFGKLPLCLFI
                     CIILTAVTVVTTAHHTRLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIAT
                     EKLQMQHVDPSQENIVVQK"
     gene            complement(26214..27155)
                     /gene="rsmH"
                     /locus_tag="JNZ57_000025"
     CDS             complement(26214..27155)
                     /gene="rsmH"
                     /locus_tag="JNZ57_000025"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HAY8826385.1"
                     /translation="MMENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQ
                     LGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDL
                     GVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERF
                     AKRIARAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEE
                     IEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKL
                     GGRQLRALGKLMPGEEEVAENPRARSSVLRIAERTNA"
     gene            complement(27157..27615)
                     /gene="mraZ"
                     /locus_tag="JNZ57_000026"
     CDS             complement(27157..27615)
                     /gene="mraZ"
                     /locus_tag="JNZ57_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HAY8826386.1"
                     /translation="MFRGATLVNLDSKGRLSVPTRYREQLLENAAGQMVCTIDIHHPC
                     LLLYPLPEWEIIEQKLSRLSSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHA
                     GLTKEVMLVGQFNKFELWDETTWHQQVKEDIDAEQLATGDLSERLQDLSL"
     gene            complement(28217..29221)
                     /gene="cra"
                     /locus_tag="JNZ57_000027"
     CDS             complement(28217..29221)
                     /gene="cra"
                     /locus_tag="JNZ57_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolite repressor/activator"
                     /protein_id="HAY8826387.1"
                     /translation="MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVRE
                     HNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQ
                     PDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVV
                     GADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYAN
                     SYEREAAAQLFEKWLETHPMPQALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDN
                     ELLDFLQCPVLAVAQRHRDVAERVLEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS
                     "
     gene            complement(29303..29389)
                     /locus_tag="JNZ57_000028"
     CDS             complement(29303..29389)
                     /locus_tag="JNZ57_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fruR/shl operon leader peptide"
                     /protein_id="HAY8826388.1"
                     /translation="MCNLQPNMSRWAFFAKSVGTWNKSSCRS"
     gene            complement(29401..29892)
                     /gene="ilvN"
                     /locus_tag="JNZ57_000029"
     CDS             complement(29401..29892)
                     /gene="ilvN"
                     /locus_tag="JNZ57_000029"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001563086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HAY8826389.1"
                     /translation="MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLS
                     RMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVK
                     RNTEIFRGQIIDVTPSLYTVQLAGTSDKLDAFLASIREVAKIVEVARSGVVGLSRGDK
                     IMR"
     gene            complement(29895..31619)
                     /gene="ilvI"
                     /locus_tag="JNZ57_000030"
                     /pseudo
     CDS             complement(29895..31619)
                     /gene="ilvI"
                     /locus_tag="JNZ57_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025294.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
     gene            complement(31937..32881)
                     /gene="leuO"
                     /locus_tag="JNZ57_000031"
     CDS             complement(31937..32881)
                     /gene="leuO"
                     /locus_tag="JNZ57_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LeuO"
                     /protein_id="HAY8826390.1"
                     /translation="MPEVQTDHSETAELSKPQLRMVDLNLLTVFDAVMQEQNITRAAH
                     VLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELPG
                     SGFEPASSERVFHLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRYQ
                     ETEFVISYEDFHRPEFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLDR
                     FASFSQPWYDTVDKQASIAYQGMAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQVL
                     PLLLKQNSRTCYLSWHEAAGRDKGHQWMEEQLVSICKR"
     gene            33542..33628
                     /gene="leuL"
                     /locus_tag="JNZ57_000032"
     CDS             33542..33628
                     /gene="leuL"
                     /locus_tag="JNZ57_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leu operon leader peptide"
                     /protein_id="HAY8826391.1"
                     /translation="MTHIVRFIGLLLLNASSLRGRRVSGIQH"
     gene            33721..35292
                     /gene="leuA"
                     /locus_tag="JNZ57_000033"
     CDS             33721..35292
                     /gene="leuA"
                     /locus_tag="JNZ57_000033"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016831521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HAY8826392.1"
                     /translation="MSQQVIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVME
                     VGFPVSSPGDFESVQTIARQVKNSRVCALARCVEKDIDVAAESLKVAEAFRIHTFIAT
                     SPMHIATKLRSTLDEVIERAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVKAAIN
                     AGATTINIPDTVGYTMPFEFAGIISGLYERVPNIDKAIISVHTHDDLGLAVGNSLAAV
                     HAGARQVEGAMNGIGERAGNCSLEEVIMAIKVRKDILNVHTAINHQEIWRTSQLVSQI
                     CNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRENYEIMTPESIGLNQIQLNLTSRSGR
                     AAVKHRMDEMGYKESEYNLDNLYDAFLKLADKKGQVFDYDLEALAFIGKQQEEPEHFR
                     LDYFSVQSGSNDIATAAVKLACGEEVKAEAANGNGPVDAVYQAINRITDYNVELVKYS
                     LTAKGHGKDALGQVDIVANYNGRRFHGVGLATDIVESSAKAMVHVLNNIWRAAEVEKE
                     LQRKAQHNENNKETV"
     gene            35292..36383
                     /gene="leuB"
                     /locus_tag="JNZ57_000034"
     CDS             35292..36383
                     /gene="leuB"
                     /locus_tag="JNZ57_000034"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HAY8826393.1"
                     /translation="MSKNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYD
                     VGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHF
                     KLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK
                     AFDTEVYHRFEIERIARIAFESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYPD
                     VELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQG
                     FGLYEPAGGSAPDITGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEGI
                     RTGDLARGAAAVSTDEMGDIIARYVAEGV"
     gene            36386..37786
                     /gene="leuC"
                     /locus_tag="JNZ57_000035"
     CDS             36386..37786
                     /gene="leuC"
                     /locus_tag="JNZ57_000035"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HAY8826394.1"
                     /translation="MAKTLYEKLFDAHVVYEAENETPLLYIDRHLVHEVTSPQAFDGL
                     RAHGRPVRQPGKTFATMDHNVSTQTKDINACGEMARIQMQELIKNCKEFGVELYDLNH
                     PYQGIVHVMGPEQGVTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQ
                     GRAKTMKIEVQGKAAPGITAKDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMT
                     LCNMAIEMGAKAGLVAPDETTFNYVKGRLHAPKGKDFDDAVAYWKTLQTDEGATFDTV
                     VTLQAEEISPQVTWGTNPGQVISVNDNIPDPASFADPVERASAEKALAYMGLKPGIPL
                     TEVAIDKVFIGSCTNSRIEDLRAAAEIAKGRKVAPGVQALVVPGSGPVKAQAEAEGLD
                     KIFIEAGFEWRLPGCSMCLAMNNDRLNPGERCASTSNRNFEGRQGRGGRTHLVSPAMA
                     AAAAVTGHFADIRNIK"
     gene            37797..38402
                     /gene="leuD"
                     /locus_tag="JNZ57_000036"
     CDS             37797..38402
                     /gene="leuD"
                     /locus_tag="JNZ57_000036"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HAY8826395.1"
                     /translation="MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLF
                     NDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVI
                     APSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTY
                     RFTIDAFRRHCMMNGLDSIGLTLQHDDAIAAYEAKQPAFMN"
     gene            complement(38451..39512)
                     /locus_tag="JNZ57_000037"
     CDS             complement(38451..39512)
                     /locus_tag="JNZ57_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8826396.1"
                     /translation="MIWIMTMARRMNGVYAAMGVAGALQAPTLSLFLSREVGAQPFWI
                     GLFYTVNTIAGIGVSLWLAKRSDSQGDRRKLIIFCCLMAIGNAPLFAFNRHYLTLITC
                     GVLLASLANTAMPQLFALAREYADNSAREVVMFSIAAGIFTLSLVLIAFMLPSVARVE
                     LPSENALSMQGGWQDSNVRMLFVASTLMWTCNTMYIIDMPLWISSELGLPDKLAGFLM
                     GTAAGLEIPAMILAGYYVKRYGKRRMMVIAVAAGVLFYTGLIFFHSRMALMTLQLFNA
                     VFIGIVAGIGMLWFQDLMPGRAGAATTLFTNSISTGVILAGVIQGAIAQSWGHFAVYW
                     VIAVISVVALFLTAKVKDV"
     gene            complement(39614..39745)
                     /gene="sgrT"
                     /locus_tag="JNZ57_000038"
     CDS             complement(39614..39745)
                     /gene="sgrT"
                     /locus_tag="JNZ57_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose uptake inhibitor SgrT"
                     /protein_id="HAY8826397.1"
                     /translation="MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEGLMQWDDRNSES"
     gene            39834..41489
                     /locus_tag="JNZ57_000039"
     CDS             39834..41489
                     /locus_tag="JNZ57_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SgrR"
                     /protein_id="HAY8826398.1"
                     /translation="MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLL
                     NTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKAT
                     VRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEE
                     NGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIA
                     DIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRN
                     TTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEG
                     CYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHART
                     IKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIES
                     DIWLNSANFTLPLDFSLFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVA
                     SKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP"
     regulatory      41523..41622
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            41653..42636
                     /gene="thiB"
                     /locus_tag="JNZ57_000040"
     CDS             41653..42636
                     /gene="thiB"
                     /locus_tag="JNZ57_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706021.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate binding
                     subunit"
                     /protein_id="HAY8826399.1"
                     /translation="MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPKIKKAF
                     EADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVA
                     ADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRT
                     STPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTS
                     PAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIP
                     TGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAWISGWQRAVSR"
     gene            42612..44222
                     /gene="thiP"
                     /locus_tag="JNZ57_000041"
     CDS             42612..44222
                     /gene="thiP"
                     /locus_tag="JNZ57_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine/thiamine pyrophosphate ABC transporter
                     permease ThiP"
                     /protein_id="HAY8826400.1"
                     /translation="MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWV
                     AVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLIL
                     PVLVAVFGILSVYGRQGWLASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQ
                     ALENIPDEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLG
                     GGPQATTIELAIYQALSYDYDPARAAMLALIQMVCCLGLVLLSQRLSKAIAPGTTLLQ
                     GWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTS
                     LRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFL
                     LLNNTIGLQQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRL
                     KVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGA
                     VTALILLLLCFLLFTVIEKLPGRNVKTD"
     gene            44206..44904
                     /gene="thiQ"
                     /locus_tag="JNZ57_000042"
     CDS             44206..44904
                     /gene="thiQ"
                     /locus_tag="JNZ57_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706019.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter ATP-binding protein
                     ThiQ"
                     /protein_id="HAY8826401.1"
                     /translation="MLKLTDITWLYQHLPMRFSLTVERGEQVAILGPSGAGKSTLLNL
                     IAGFLTPASGSLTIDGVDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKL
                     NAAQQEKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSAL
                     DPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTEELL
                     SGKASASAILGITG"
     gene            complement(45018..45782)
                     /locus_tag="JNZ57_000043"
     CDS             complement(45018..45782)
                     /locus_tag="JNZ57_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY8826402.1"
                     /translation="MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAG
                     LGALIGSGELSFWHAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTE
                     HALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGI
                     LAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLL
                     WLTPLISAIGVVALVVLIRQPLMPVYIDILRKVVGV"
     gene            complement(45868..46746)
                     /gene="araC"
                     /locus_tag="JNZ57_000044"
     CDS             complement(45868..46746)
                     /gene="araC"
                     /locus_tag="JNZ57_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose operon transcriptional regulator AraC"
                     /protein_id="HAY8826403.1"
                     /translation="MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKG
                     YILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRA
                     YWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLL
                     LRRMEAINESLHPPMDNRVREACQYISDHLADSDFDIASVAQHVCLSPSRLSHLFRQQ
                     LGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEF
                     RAGCEEKVNDVAVKLS"
     gene            47085..48785
                     /gene="araB"
                     /locus_tag="JNZ57_000045"
     CDS             47085..48785
                     /gene="araB"
                     /locus_tag="JNZ57_000045"
                     /EC_number="2.7.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulokinase"
                     /protein_id="HAY8826404.1"
                     /translation="MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCD
                     APNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVL
                     ALRPEFAEKPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKI
                     LHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLP
                     PASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCH
                     MGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAG
                     QSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLP
                     VVLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGI
                     AVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIP
                     SAQQKMASAVEKTLQPRSEQAQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVPTL
                     "
     gene            48796..50298
                     /gene="araA"
                     /locus_tag="JNZ57_000046"
     CDS             48796..50298
                     /gene="araA"
                     /locus_tag="JNZ57_000046"
                     /EC_number="5.3.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose isomerase"
                     /protein_id="HAY8826405.1"
                     /translation="MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKL
                     PCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQ
                     FHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERI
                     GSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVV
                     NSISDGDVNALVDEYESCYTMTPATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFT
                     TTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMED
                     YTYHFEKGNDLVLGSHMLEVCPSIAVEEKPILDVQHLGIGGKDDPARLIFNTQTGPAI
                     VASLIDLGDRYRLLVNCIDTVKTPHSLLKLPVANALWKAQPDLPTASEAWILAGGAHH
                     TVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR"
     gene            50498..51193
                     /gene="araD"
                     /locus_tag="JNZ57_000047"
     CDS             50498..51193
                     /gene="araD"
                     /locus_tag="JNZ57_000047"
                     /EC_number="5.1.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HAY8826406.1"
                     /translation="MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPS
                     GVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHAT
                     IWAQSGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDA
                     AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMEIFCRQLAPQLPDMQQTLLDKH
                     YLRKHGAKAYYGQ"
     gene            51268..53619
                     /gene="polB"
                     /locus_tag="JNZ57_000048"
     CDS             51268..53619
                     /gene="polB"
                     /locus_tag="JNZ57_000048"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase II"
                     /protein_id="HAY8826407.1"
                     /translation="MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAF
                     IPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVT
                     VYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETT
                     RHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPD
                     VIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIID
                     GIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLK
                     DCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLG
                     EVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHS
                     TEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTAC
                     RFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIG
                     RALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLIPTIRGADTGSKKRYAGLIQEG
                     DKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARL
                     VYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPL
                     DYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF"
     gene            53783..56689
                     /gene="rapA"
                     /locus_tag="JNZ57_000049"
     CDS             53783..56689
                     /gene="rapA"
                     /locus_tag="JNZ57_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001117023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-associated protein RapA"
                     /protein_id="HAY8826408.1"
                     /translation="MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYA
                     RSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFL
                     DSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLN
                     IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVE
                     MLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDL
                     LVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPN
                     RFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSD
                     SEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKV
                     SGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLV
                     ICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIG
                     SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW
                     YHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLE
                     QGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLLDIIGINQDDRGDNMIVL
                     TPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGS
                     STISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQV
                     EFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKL
                     SAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ"
     gene            56701..57360
                     /gene="rluA"
                     /locus_tag="JNZ57_000050"
     CDS             56701..57360
                     /gene="rluA"
                     /locus_tag="JNZ57_000050"
                     /EC_number="5.4.99.28"
                     /EC_number="5.4.99.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA pseudouridine(32) synthase/23S
                     rRNA pseudouridine(746) synthase RluA"
                     /protein_id="HAY8826409.1"
                     /translation="MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKD
                     SVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWG
                     HPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGR
                     SHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPAD
                     F"
     gene            complement(57477..58292)
                     /gene="djlA"
                     /locus_tag="JNZ57_000051"
     CDS             complement(57477..58292)
                     /gene="djlA"
                     /locus_tag="JNZ57_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone DjlA"
                     /protein_id="HAY8826410.1"
                     /translation="MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWF
                     ANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDLMNLHGASRTAAQNAFR
                     VGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERSVLYVIAEE
                     LGISRAQFDQFLRMMQGGAQFGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDA
                     TTIKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK"
     gene            58547..60901
                     /gene="lptD"
                     /locus_tag="JNZ57_000052"
     CDS             58547..60901
                     /gene="lptD"
                     /locus_tag="JNZ57_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HAY8826411.1"
                     /translation="MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQ
                     GDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVPLHQKEAPGQPEPVR
                     TVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN
                     RYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQL
                     PVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEF
                     RYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWQHSGVMDQVWRFNVDYTKV
                     SDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEP
                     QLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTE
                     AKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTL
                     EPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRI
                     YDDAAVEHFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRG
                     GIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGI
                     SQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWD
                     NDKQHAVYDNAIGFNIELRGLSSNYGLDTQEMLRSNILPYQNTL"
     gene            60954..62240
                     /gene="surA"
                     /locus_tag="JNZ57_000053"
     CDS             60954..62240
                     /gene="surA"
                     /locus_tag="JNZ57_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase SurA"
                     /protein_id="HAY8826412.1"
                     /translation="MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDG
                     LMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIAN
                     IAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESL
                     AQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQVRNGADFGKLAIA
                     HSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGE
                     SKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPDS
                     ANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAA
                     QKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN"
     gene            62240..63229
                     /gene="pdxA"
                     /locus_tag="JNZ57_000054"
     CDS             62240..63229
                     /gene="pdxA"
                     /locus_tag="JNZ57_000054"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HAY8826413.1"
                     /translation="MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLT
                     DRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALRESVTAGQLAIENGHYVVETLA
                     RACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRV
                     ALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHM
                     GTEEIDTIIPVLDELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQ
                     GFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ"
     gene            63226..64047
                     /gene="rsmA"
                     /locus_tag="JNZ57_000055"
     CDS             63226..64047
                     /gene="rsmA"
                     /locus_tag="JNZ57_000055"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HAY8826414.1"
                     /translation="MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEI
                     GPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAE
                     KMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRL
                     SVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAF
                     NQRRKTIRNSLGNLFSVEVLTGMGLDPAMRAENISVAQYCQMANYLAENAPLQES"
     gene            64050..64427
                     /gene="apaG"
                     /locus_tag="JNZ57_000056"
     CDS             64050..64427
                     /gene="apaG"
                     /locus_tag="JNZ57_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HAY8826415.1"
                     /translation="MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQ
                     LLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMI
                     DENGVPFSIDIPVFRLAVPTLIH"
     gene            64434..65276
                     /gene="apaH"
                     /locus_tag="JNZ57_000057"
     CDS             64434..65276
                     /gene="apaH"
                     /locus_tag="JNZ57_000057"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase
                     (symmetrical)"
                     /protein_id="HAY8826416.1"
                     /translation="MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPG
                     SLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWL
                     RRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMP
                     NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVA
                     EEYSIAFGHWASLEGKGTPEGIYALDTGCCWGGTLTCLRWEDKQYFVQPSNRHKDLGE
                     AAAS"
     gene            complement(65354..65833)
                     /gene="folA"
                     /locus_tag="JNZ57_000058"
     CDS             complement(65354..65833)
                     /gene="folA"
                     /locus_tag="JNZ57_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 dihydrofolate reductase"
                     /protein_id="HAY8826417.1"
                     /translation="MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGR
                     HTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQ
                     FLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR"
     gene            complement(66025..67887)
                     /gene="kefC"
                     /locus_tag="JNZ57_000059"
     CDS             complement(66025..67887)
                     /gene="kefC"
                     /locus_tag="JNZ57_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     protein KefC"
                     /protein_id="HAY8826418.1"
                     /translation="MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPW
                     GLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLG
                     LFCMLLGLRWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAI
                     PLVAMIPLLATSSASTTMGAFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREV
                     FSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLF
                     FIGVGMSIDFGTLLENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQ
                     GSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREA
                     DEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDA
                     TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQ
                     AGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTK
                     ARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS"
     gene            complement(67880..68410)
                     /gene="kefF"
                     /locus_tag="JNZ57_000060"
     CDS             complement(67880..68410)
                     /gene="kefF"
                     /locus_tag="JNZ57_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     oxidoreductase KefF"
                     /protein_id="HAY8826419.1"
                     /translation="MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNI
                     DIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVLSHGWAYGHGGKALHGKHLLW
                     AVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQA
                     RHYKQRLLEWQEAHHG"
     gene            complement(68492..>69765)
                     /locus_tag="JNZ57_000061"
     CDS             complement(68492..>69765)
                     /locus_tag="JNZ57_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005116114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8826420.1"
                     /translation="DGYVLVMIGVALEQLTPALKLDADWIGLLGAGTLAGLFVGTSLF
                     GYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLVMRVLIGIVIGADYPIATSMI
                     TEFSSTRQRAFSISFIAAMWYVGVTCADLVGYWLYDVEGGWRWMLGSAAIPCLLILIG
                     RFELPESPRWLLRKGRVKECEEMMIKLFGEPVAFDEEQPQQTRFRDLFNRRHFPFVLF
                     VAAIWTCQVIPMFAIYTFGPQIVGLLGLGVGKNAALGNVVISLFFMLGCIPPMLWLNT
                     AGRRPLLIGSFAMMTLALAVLGLIPDMGIWLVVMAFAVYAFFSGGPGNLQWLYPNELF
                     PTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGISNTMLMGAGISLFGLLISVAFA
                     PETSRDVTGANQQYDDPRAENGVNCSDFSLF"
BASE COUNT        16862 a        19327 c        17704 g        15872 t
ORIGIN      
        1 gtggattaga tacctgcgac ggtggcagca atggcattcc ctcgcctacc accacccgct
       61 atgtttcagc catgagtgtg gcaaaaggcg tggtgtcgct gaccgggcaa gaaagtctca
      121 atggactaag cgtcgtcatg acgccaggtt gggataacgc aaacggcgtc accggctggg
      181 cgcgcaactg caatattcaa agtgacagcg cattgcagca agcctgcgaa gatgtcttcc
      241 gctttgatga cgccaactaa ggagcggcaa tgaatattcc acagctcacc gccctgtgtc
      301 tgcgttatca gggagtcttg ctggatgcca gcgaagaggt ggttcatgtt gcggtagtcg
      361 atgcaccttc gcatgagttg ctggacgcat tgcatttcgc taccaccaaa cgtattgaga
      421 tcacctgctg gacgcgccaa caaatggaag gccacgccag tcgcacacaa cagacattgc
      481 ccgtagctgt tcaggagaag catcagtcga aagcagagtt gctgactcga acgttacaat
      541 ctgcgctgga acaacgtgcg tctgatattc atatcgaacc agcggacaat gcctaccgca
      601 tccgcttgcg tatcgacggc gtattgcatc ctttaccgga tgtttcaccg gatgccggag
      661 tcgcattaac cgccagatta aaagtgctgg gaaacctgga tattgcggaa catcgcctgc
      721 cgcaggacgg gcaattcact gtcgaactgg caggaaacgc cgtctcattt cgtattgcga
      781 ccttaccatg tcggggtggt gaaaaggtag tattaaggtt gttacagcag gtgaaccagg
      841 cactggatgt taacacgctg ggaatgcagc cgttacaact ggcggacttt gctcatgcct
      901 tgcaacaacc acagggactg gtgctggtaa ctggccctac aggcagcggc aaaacggtca
      961 cgctttatag tgccctgcaa aagctgaata ccgctgacat taatatttgt agcgtcgaag
     1021 atccggttga gatccccata gccggactaa accagacgca aatccatccg cgtgccgggc
     1081 tcacctttca gggcgttttg cgtgcgttat tgcgccagga tcctgacgtc atcatgatcc
     1141 gatggcgaaa cggcagaaat tgccattaaa gccgcgcaaa ccggtcacct ggtgttgtct
     1201 accctacaca ctaattccac ctgcgaaacg ctggtacgtt tacagcaaat gggagtcgcc
     1261 cgctggatgc tctcatcagc gcttacgctg gtaatagccc agcgtctggt acgtaaattt
     1321 tgcccacatt gtcgccagca gcaaggggag cccatccata ttccagacaa tgtatggccg
     1381 tcgccgctgc cccactggca ggcacccggt tgtgtacatt gctaccacgg tttttatggt
     1441 cgtaccgcct tgtttgaagt cctgcccatt acaccagcca tacgccagct tatttccgct
     1501 aataccgacg ttgaatcgct ggaaacgcac gcacgacagg cgggtatgcg tacgcttttt
     1561 gaaaacggct gcctagccgt ggagcaaggc ttaaccacct ttgaagagtt aatccgcgta
     1621 ctggggatgc cgcatggcga gtaagcaact ctggcgctgg catggcataa ccggcgacgg
     1681 caatgcgcaa gatgggatgc tatgggcaga gagccgtgct ttgctgctca tggcactaca
     1741 gcaacagatg gttaccccac ttagcctgaa gcgaatcgcc atcaattctg cgcagtggcg
     1801 aggagataaa agcgcggaag tcattcatca actggcgacg ctactcaaag ccgggttaac
     1861 gctttctgaa gggctggcac tgctggcgga acagcatccc agtaagcaat ggcaagcgtt
     1921 gctgcaatcg ctggcgcacg atctcgaaca gggcattgct ttttccaatg ccttattacc
     1981 ctggtcagag gtatttccgc cactctatca ggcgatgatc cgcacgggtg aactgaccgg
     2041 taagctggat gaatgctgct ttgaactggc gcgtcagcaa aaagcccagc gtcagttgac
     2101 cgacaaagtg aaatcagcgt tacgttatcc catcatcatt ttagcgatgg caatcatggt
     2161 ggttgtggca atgctgcatt ttgttctgcc ggagtttgcc gctatctata agaccttcaa
     2221 caccccacta ccggcactaa cgcaggggat catgacgctg gcagacttta gtggcgaatg
     2281 gagctggctg ctggtgttgt tcggctttct gctggcgata gccaataagt tgctgatgcg
     2341 ccgaccgact tggcttatag tgcggcagaa attgctgtta cgcatcccga ttatgggttc
     2401 actgatgcgg ggacaaaaac tcacgcagat ctttacgatt ctggcgctga cacaaagtgc
     2461 aggcattact tttttgcagg gcgtagagag cgtcagagaa acaatgcgct gcccgtactg
     2521 ggtgcaactt ctgacacaaa tccagcacga tatcagtaac ggtcatccca tctggctggc
     2581 gctaaaaaat accggggagt ttagcccgct ctgtttgcaa ttagtgagaa caggagaggc
     2641 atccggctcg ctggacctca tgttagacaa cctcgcccat catcatcggg ataacacaat
     2701 ggcgctggcg gataacctcg cagccttact ggaaccggcg ttgctgatca taacgggagg
     2761 aattatcggt acgctggtgg tggcgatgta tctgccaatt ttccatttag gcgatgcgat
     2821 gagtgggatg ggataacgct ggcgtgttgc tccacaccag cgttggaaga ttacaggttg
     2881 ttgaagatgc ggttttcttg ttcctgcaca cggataaatg tggtgcgctt ggtcagttct
     2941 ttcaggcgtg aagccccaac gtatgtacaa gctgaacgca ggccgcccaa aatatcacgc
     3001 gcggtatttt caaccgggcc tcgcagcggc agcttaacgg ttttaccttc tgctgcgcga
     3061 tattccgcaa cgccgccaac gtgacgtttc atcgcagact cggagctcat gccgtagaac
     3121 agcataaatt tctcgccgtt ctcctcaacg atgcgaccgc cgctctcttc gtggcccgcc
     3181 agcatgccgc caagcatgac gaaatcggca ccgccgccaa aggcttttgc gacatcgccc
     3241 ggcgtggtgc agccaccgtc gctgacgatc attccgccca gaccgtgcgc cgcatcggca
     3301 cattcgatta ccgcagaaag ctgcggataa ccgacgcctg ttttgacgcg agttgtacaa
     3361 acagaacctg ggccaatgcc aactttaacg atatcagcac cggagaggat aagctcctca
     3421 cacatttcac cagtcactac gttgccagca caaatggttt tggtcggcca cgcttcacgc
     3481 gctttcgcaa cgaactgcac gaagtgttcg gaataaccat tcgccacatc aatacaaaca
     3541 aagtttaatg ccgggttcag gtcgagaatc tgtttagttt tttcgaaatc cgcatcagac
     3601 gtaccggtag aaaccatcac atgtttcagc acatcagcgg aagaattgtt gataaacgct
     3661 tgccactctt cgacagaata gtgtttatgc acagcagtca aaatatcaaa agaagccagc
     3721 gcagaggcca tagaaaatgt acctacggtg tccatatttg cggcgataat cggcacgccg
     3781 gaccagctct gatctgaatg tttgaaggtg aattgacgtt ccagttcaac atcggaacgg
     3841 cttttaagag tggagcgttt agggcggatg agaacgtctt taaaacctaa cttcagatct
     3901 tcttcaatac gcatgtgcgg attcctgggg ttaatggcta taagggtaag agcgcaactc
     3961 cagtgacgct atcatacgca ctaatcaatg cggcgcaaga ctgcgaaatt gtcttttttt
     4021 acgctacaat cccataaatt tacctggtaa atagtgagcg aacgtttcat caatttcgct
     4081 ttcgtgcact catttttaac gttttgataa tcatgatgaa ttcccgggaa tataaattat
     4141 gaggtatata gttgccttaa cgggaggcat tggcagtggc aagagtaccg ttgccaatgc
     4201 gtttgctgat ctcggaatta acgtcattga tgccgatatt attgcgcgtc aggtggttga
     4261 accaggtgca cctgcgctac atgccattgc tgatcacttt ggcgctaaca tgattgctgc
     4321 tgatggaaca ttgcagcgcc gggccttgcg cgagcggatc ttcgccaacc cggaagagaa
     4381 aaactggctt aacgccctgc tgcatccgct gattcagcaa gagacgcaac accagatcca
     4441 gcaagctact tccccctatg tactgtgggt tgtgccattg ctggtagaaa actcactgta
     4501 taaaaaagcg aatcgagtgc tggtggtgga tgtcagccca gaaacgcaac ttaagcgcac
     4561 catgcagcgc gatgatgtaa ctcgcgagca tgtcgaacaa atccttgctg ctcaggcaac
     4621 gcgcgaagcc cgccttgccg tggcagatga cgtcattgat aataacggcg caccggatgc
     4681 tatcgcatcg gatgttgccc gcctgcacgc acactatttg cagcttgcgt cgcagtttgt
     4741 ctcacaggaa aaaccgtaat gcagacccag gtcctttttg aacatccact aaatgaaaaa
     4801 atgcgtacat ggctgcgcat tgagtttttg attcagcaac tcaccgttaa tttacccatc
     4861 gttgaccacg ctggcgcgct gcatttcttc cgtaatgtca gtgaattact ggatgttttc
     4921 gagcgcggcg aagtccgcac tgagctgttg aaagaacttg accggcagca acgtaaactc
     4981 cagacctgga ttggcgtgcc tggcgtggac cagagccgta ttgaagcatt aattcagcag
     5041 ttaaaagcgg cggggagcgt attaatttcc gcgccgcgta tcgggcaatt tctgcgtgaa
     5101 gatcgtttga ttgctctggt gcgtcagcga ctgagcatcc caggcggctg ttgcagcttt
     5161 gatttaccta cattgcacat ttggctgcat ctaccccagg cgcagcgcga cagccaggta
     5221 gaaacctgga ttgccagcct gaacccgctc acccaggcac ttaccatggt gctggattta
     5281 attcgccagt cggccccctt ccgtaaacaa accagcctga atggttttta tcaggataac
     5341 ggtggcgatg ccgacttgct gcgcctgaat ctgtcgctcg attcacagct ttatccgcaa
     5401 atttccggac ataagagccg ttttgccatt cgttttatgc cgctggacag tgaaaacgga
     5461 caggtaccgg aacgtctaga tttcgaactg gcctgttgct aaggagtgaa aatgtcagaa
     5521 actattacgg tgaattgccc aacctgcggg aaaacggtgg tgtggggtga aatcagcccg
     5581 tttcggccat tttgctccaa acgttgtcag ctgatcgacc tcggagaatg ggctgctgaa
     5641 gaaaaacgaa tccccagcag tggcgatctt tccgaaagcg atgactggag cgaagagcca
     5701 aagcagtgac attggtctga tgccgcacat aggcctgata agacgcggac agcgtcgcat
     5761 caggcatctt gtgcaaatgt cggatgcggc gtgaacgcct tatccgacct acagactaca
     5821 gacgcttaag cttcgcaatt accggttcat tggctggcgg aaaatcatcg gcattaagac
     5881 cgaccagcga catccactca ccgggttgcc cttctttacc ccacggcacc ccttcccaac
     5941 tttcgaccag ccagaaccac agagttatat gcctgtccgg gaattcatat gccagttttt
     6001 caaatagcga aaaatgttgt ggggtaatcc cgacctcttc ctgaagttca cgcaccaccg
     6061 cctgttccgg cgtttcgccc atttcaattt taccgccggg aaactccagt ttattcgcca
     6121 tgtgcgcatc tgctgcgcga cgcgttataa agatttcatt gttctcgttg cgaataatac
     6181 ctaccgcaat ttgcagcttt ttcattgttt taaacctata aaaaaggcgc agaatcctgc
     6241 gccttttgct tcaacagtta gcttttattg caggcggcca tgacactgct tgtatttttt
     6301 accagaaccg cacgggcaag gatcgttacg tcctactttg cgctcaccgg tttgcgccgc
     6361 caatgcagct gcggctgcag agtcgtcatc ctgatggcta agctgctgca tttgcgctaa
     6421 acgctcggct tccatacgac gctgttgttc cagctcctca acctcttcag gcatacgtac
     6481 ctgaactttg ctcagcgtac tgataacttc atatttcaac gactccagca tcgctgcaaa
     6541 catggagaac gattcacgtt tgtattcctg cttcggatct ttctgtgcat agccacgcag
     6601 gtggataccc tgacgcagat agtccatcgc tgccaggtgc tctttccaca gggagtcaag
     6661 cgtttgcagc atgacgcctt tctcgaagtg acgcatcatc tcagcaccaa ccacttcttc
     6721 tttacgctga tacacttcga tggactgcgc cagaatgcgc tcacgcagcg tctcttcatg
     6781 cagttctggt tctttatcca gccactcggc aattggtaaa tcgaggtcga aatcgttctt
     6841 cagacgttcc tgcagccccg gaatatccca catttcttcc agcgactgtg gcggaatgta
     6901 ggcatcaatg gtggctttga acacatcttc acgaatgctg ttgatggttt cgctcacatc
     6961 gctgacatcc agcagttcat tacgctggga gtaaatggcg cgacgctgat cgttagccac
     7021 gtcatcatat tccagcagtt gcttacgaat gtcgaagtta cgactttcaa ctttacgctg
     7081 ggcgttggca atcgctttag tcacccacgg gtgttcaatg gcttcgcctg gcttcatacc
     7141 cagtttacgc atcatgccgg atactcggtc ggaagcaaaa atacgcatca gcgcatcttc
     7201 catcgacagg tagaaacggg aagaaccagc atccccctga cgaccagaac gaccgcgcaa
     7261 ctggttatcg atacgacggg attcgtgacg ctcggtaccg atgatatgca ggccacctgc
     7321 ttccagtacc gcatcgtgac gtacctgcca gtcggcttta attttttcaa tttgctctgc
     7381 ggtcggattt tccagcgcgg caacttctgc ctgccagcta ccaccgagca caatatctgt
     7441 accacgaccc gccatattgg tcgcgatagt caccgcagcc ggataacctg cctgagcaac
     7501 aatcgccgct tcgttggcgt ggaatttggc gttcaggacg ttgtgcttaa taccggcttt
     7561 ggtcagttcg tttgacacca gctccgattt ttcgatggag atagtaccca ccagcaccgg
     7621 ctggcctttc gcagtacgtt ctttgatatc ttcaatgatc gcctgaattt tttccgcttc
     7681 agtcatgtag accaggtccg gcagatcttt acgaatcatt ggacggttgg tcggaacaac
     7741 gacggtatcc agcttgtaga tggagctaaa ttcgaaagct tcggtatcag cagtaccggt
     7801 catccccgcc agtttttcat acagacggaa gtagttctgg aaggtgatcg aagccagcgt
     7861 ttggttttcg ttctggatct gcacaccttc tttcgcttcc acagcctggt gcagaccatc
     7921 ggaccagcga cggccctgca tggtacgacc ggtgtgttcg tcaacgatga taacttcacc
     7981 atctttaacg atgtagtcga cgtcgcgggt aaacagcgca tgagcgcgca gcgccgccgt
     8041 tacgtggtgc atcagcatga tgttggccgg agagtacaga gactcccctt catccatgat
     8101 gccctctttc accagcagtt cttcaatcag caccagacca cgttcggtca ggttcacctg
     8161 gcgagatttt tcgtccaccg agaagtggcc ttcgccctgg aaggtttcgg agtcttcttt
     8221 ttcctgacgg atcaggtgcg gaataatttt attcacgcgt ttatacattt ccgagctgtc
     8281 ttctgccggg ccggaaatga tcagcggtgt acgcgcttca tcgatcagga tggagtccac
     8341 ttcgtccacc agcgcatagt gcagtttacg ctgtacacgt tcttcagggc tgaacgccat
     8401 attgtcgcgc aggtagtcaa agccgtattc gttgttcgta ccgtaagtga tgtcagctgc
     8461 gtaagcttcg cgctttgccg gtgctggcat gcccggcagg ttgataccga cagtcaggcc
     8521 aaggaattca aacagcggac ggttgttttc ggcgtcacgt tgcgccaggt agtcgttgac
     8581 ggtaactacg tgcacgcctt taccggttag tgcgttcagg taagcaggca gcgttgcggt
     8641 cagggtttta ccttcaccgg tacgcatttc ggcgatgcag cgttcgttaa gaaccatacc
     8701 gccgagtaac tgaacgtcga agtgacgcat accaaagacg cgcttacttg cctcacgtac
     8761 cacggcgaaa gcttccggga tcagattttc cagcacttcg cctttttcca gacgtgcacg
     8821 aaactctgcg gttttccctt tcagttcttc gtcggagagt ttttccatct ccggttccat
     8881 ggcattgatg atgttgacca ctttgcgcat ccggcgcagg gtgcgatcgt tacgactacc
     8941 gaaaacttta gttaacaatt tgattagcat aataaaatct caaacgcccc gcgttgcgga
     9001 gttaataaaa tgaagtaaag gtttattgtt gttaggtgag gcgttgaggg ccagcacgga
     9061 tgccttgcgc ctggcttatc cagacgggcg tgctgaattt tgcttgtggg gtaaaatgcg
     9121 cataatcaat gcgataaccc ttttcagacg gcgtgccttc ctgggtcagc agcgcgctga
     9181 gcgtatccag taatgcaaga tgttgcgcct gaagaggcaa agattcttca gcaacgggca
     9241 gtgtttgcgg tgccattgcg aaagaaagat gacggattac cgtgcgaatg gcatattgat
     9301 gccagtaatc aacggaatag ttcgaattcg ggcggcgtgt gttcgcttcc agcaaggcca
     9361 attgaccaaa gttaactttg gctgaaggct cgtggttgcg ggttgtcgct tttgcgggca
     9421 cgtttggttc ggcggcgttg ctgagcgcag gcaaaccgaa actcgccgcg accatcccta
     9481 ataagagatg cggccagaag tagcgtttac caaactgtcg ccagcgcgtc agtattccac
     9541 tcacgttatt gccatcccga tcgaattcaa acgtatttag cgcacaaatc ttatcattaa
     9601 agcctgaagt ccacagcatg aatgaagata agttgtgcgt aaaagtgctt aagaaaacag
     9661 cgttcgcacc gttttttata gctcttataa aattcaaaaa aaaacgactg gttcacctgg
     9721 ccggagagag tgccagattt gccagtcgaa ttttatacga cagtataaat gtcgttatgc
     9781 cagtacagct gaaggcgctt tgaaggccaa cggcagttct gcgtcgtcct ggaaggtcac
     9841 atattcccag gcttcctgtt tcgccaggac agcctgcagc agtttgttat tcagtgcatg
     9901 accggattta taagcgataa atgcaccaat aatattgtga ccacacatga acaagtcacc
     9961 gatcgcatcg agcattttgt gacgcacaaa ttcgtcttca aaacgcaggc cgtcttcgtt
    10021 cagtacgcga taatcgtcaa caacgatggc acaatcgaag ctgccgccca ggcacaaacc
    10081 acgggactgc agatattcga tatcacgcat gaaaccgaac gtacgcgcac ggctgatctg
    10141 gcgcataaac gcatcagcgg agaagttcat cgcatagcgc tggttgctgg aatcaatagc
    10201 cggatggtta aaatcgatgg tgaaatccag cgaaaaacca ttgtacggct taaattcagc
    10261 ccacttatcg ccatcttcga cacgaacagt ctctttgatg cgaacaaatt ttttggcgca
    10321 gttcaactcg tcgataccgg cgtcaagcag caggtataca aacggagcgg cgctgccgtc
    10381 catgatcggg atttccggcg cgttaacttc gataacaatg ttatcgatgc ccaggcccgc
    10441 gagagcagca ttgaggtgct ctacggttga aatccgtaca tcatgctcgt tgaccagaca
    10501 cgtacagagc atggtatcac gcacagattt ggcatcggcc gggaaatcta ccggtggatt
    10561 caagtcggtg cgacgataga tgaccccggt gttggccggc gcagggcgta acgtcagagt
    10621 gactttcttg ccggtatgta aaccgacacc cgtcgcctga acgatacgtt taagtgtcct
    10681 ttgtttgatc atcgtattat ctcgccaaat tacctatcca accgaagtgt actatacatt
    10741 cggcgggcca gtttagcaca aagagcctcg aaaccaaaat tccagtcaat tcttaatcag
    10801 cttgcttacg caggaatgct gggatatcca gataatccgg ctctttcgca gtttgcggcg
    10861 cattgtcatt cacgacttta gcaaccggct tctgctcctg ggtcagcgga gccatcccat
    10921 gctgctggta gcgatccatc actggctgct gaacctgctt attggtcacc agagtgattt
    10981 caggacgttt gtccatgccg atacctgtcg caacaacggt tacgcgcagc tcgtcattca
    11041 tatccgggtc aagagaagta ccgataacca cagtcgcgtt gtcggaagca aatgcacgga
    11101 tggtgttacc taccgtttcg aactcatcca gacgcaggtc gaagcccgcc gtgatgttaa
    11161 ccagcacgcc gcgcgcgcca gacaggtcga tatcttccag cagcggagaa gagatagcca
    11221 tttcagcagc ttcttccgca cggtcttcac cgctcgccac gccagaaccc atcattgcgt
    11281 agcccatctc agacattacg gtgcgtacgt ctgcaaagtc cacgttcatc aaacccggac
    11341 gagtaatcag ttcagcgata ccttgcacag cgcctttcag tacatcgttc gctgcgccaa
    11401 acgcatccag cagggagata ccgcggccca gaactttcag cagtttgtcg ttcgggatag
    11461 tgatcagaga gtccacatgc ttggacagtt cagtgatccc ctgctccgcg aatgccatac
    11521 gcttcttgcc ttcaaagttg aaaggcttag tgacgacagc aacggtcagg atacccaaat
    11581 cttttgccac ttcagcgacg actggtgctg cacctgtacc ggtaccacca cccatacccg
    11641 cagcaataaa gaccatgtct gcaccttcca gcgccgcacg caatgcatcg cgatcctcat
    11701 cagccgcatt gcggccaact tctggattag cgccagcgcc cagtcctttg gtgataccgc
    11761 taccgatttg aatcgtctgt ccaaccgctg ttttacgcag cgcttgtgca tcggtattta
    11821 ccgcgaagaa ttcaacacct tcaatgcgct cgcgcaccat gtgttcaaca gcattaccgc
    11881 cgccgccgcc gacgccgatg actttaatca ccgcgtcatt ggtaagttcc attggttcaa
    11941 acatagtttc tctccgattt gtgcctgtcg cctgaggccg taatcatcgt cggcctcata
    12001 aaaattaaaa ctcttttcgc agccaactat tgagtcgctt gatccacgag ccaactgatg
    12061 ctgtaacacg tttttctact tcagcttcac cgttaagatg tgactctttc ccatagtgaa
    12121 gcaatcccac cgccgtcgaa taatacggct cctgagcata atccgttaaa ccggtaatgt
    12181 tcagcggcgc gccgatacgc acttgcgtat gaaacacgcg ctgagcacag gctgcaagac
    12241 cttcgatctg cgctgcgcca ccggttaata caatgcctgc cgccaggtga tgtttaaccc
    12301 cttgttggcg aagcttttcc tgcaactgca atatctcttc gttgaccagg ttgagcagct
    12361 cggtatagcg cggctcgatc acctctgcca gggtctgacg ttgcagactc cgtggcggac
    12421 gaccgcctac gctcggcact tccacgctct catcttttcc aacgatggaa cccagcgcac
    12481 aaccgtggcg aactttaatc gcttcggcgt cgcttggcgg cgtgccaaag gcgtaagcga
    12541 tatcactggt cacgacattg ccagcataag gaattacctt agtgtggcgc aatgccccac
    12601 cggtataaac ggcgatatcc attgtaccac ctccgatatc gacgacgcag acacccagtt
    12661 cacgttcatc ttccgtcaat accgaataac ttgatgccag tccggcaaat atcagttggt
    12721 caactttcag cccacaacgt tcaaccgctt tgacgatgtt tttcgccata tcgttgtgac
    12781 atgtgatcag gtgcactttt gcctgcatcc gcacgcccga aagtcctacc ggattcttga
    12841 tcccttcctg atagtcaatc gcatactctt gcgggatcac atgcagcaca cgatgttcat
    12901 cgcgcacacg caccgatttc gcggtatgga cgacgttttc cacatcttct tgcgtcactt
    12961 cttcttcaga aataggcacc ataccaattt cattctggca gctgatgtgc ttaccagaaa
    13021 gcgccagata taccgaagag atctgacaat ctgccatcaa ttctgcctgg tcaatggcgc
    13081 gttgtacgca cttgaccacg gattcgaggt cgttcacccc gcctttatcc ataccacgtg
    13141 acgggcagct gcccacgcca atgatattga ccataccgtc gggcagaact tcccctacta
    13201 aagcggcaac cttcgcggta ccaatctcta gtcctactac cagttttctg tccgtcgcct
    13261 tgatcattgt tgttctgcct gtgcctgatt ttgttgctga gtagattcct ctggcggcaa
    13321 gggcgcccag cctactgccg ctccagagtc ataacgcaaa tcaacgtagc taatccgttt
    13381 gccatcggtt tgcgcctgct gctgtaaaac cggataaagt tctacaaagc gagccaaacg
    13441 tttcatcgta tcgccccggc caagattgag cttaatatcg ttattcagcg tcaactgcca
    13501 ggaacgccgc gcggtcatcg ccgcttcctt cagagtaaat ctgtcctttg ccagcatctg
    13561 ccccatttcg cgatagccct gcaacacttc attggcgctg ccttccgggc catacagcat
    13621 tggaagcacc tgcttgctgg tgcgatctgg cggcacgctg aaggtgtttc cttccgcgtc
    13681 taccatatgt tgatcattcc accgcgcaat cggcacatat tcaaccagat gaatcttcaa
    13741 ttcatcaggc cactgctttc tgacgctcac ctgcttaatc cacggcaggc gttgttctat
    13801 ttgcgtctgg atgatgttga catcctgggt cataaaggta cccggctcac ccaatgccag
    13861 gatcgactgc cggatatcgt cattacgcgt gtaatggcgt tcaccggtca acaccagctt
    13921 tgagagcggc aggcgttgcg catcttccat ccagcccaac acgacccagc cgctcaccaa
    13981 cactgtcgtt aaaacggtca gcaggaaaag gatccccgcc agacgcgttc cattattgcg
    14041 gcgagaagaa acctcttctt cgctgtttcg cgtgttcaga gcagcctgcg acatattagt
    14101 ccgccagttc cagaattcgt actaccaact gcgagaagct catacctgcc tgacgtgccg
    14161 ccatcggcac caggctgtgg ctggtcatac ccggtgaggt attggcttcc agcagataaa
    14221 actgtccatc gctgtccagc ataacgtcaa tacgtcccca tcctttgcaa cctaacgtcg
    14281 tccatgcttt cagcactaat gcctgcaaat tggcctcttg tgacgcatcc agacctgcgg
    14341 ggcagaaata ctgtgtctca tcagagagat acttcgcctc ataatcatag aaggttccgg
    14401 acggttgaat acgtattgac ggtaaaattt cttcaccgag tatcgcaacc gtgaactccg
    14461 gcccacttag ccatttttca atcaatactt cttcatcgtg ctgaaatgcc aatcttaatg
    14521 catcttgtag agcattttct gctactactt ttgacattcc cacactggaa ccttcgcggc
    14581 tcggcttaac gataaccggc aaacccagag cagaaatttc tgctaactgc ttatcgctca
    14641 ggcctttttc aaactctgcg cgggttaacg ctacccacgg cgcgaccggt aaaccggcac
    14701 cttgccacag cagtttgctg cgtagtttat ccattgaaag cgcagatgcc atcactccgc
    14761 tgccggtata aggcaagccc atcagctcga gcatgccctg cagcgtacca tcttcaccgc
    14821 cgcgaccgtg tagcgcgata aacactttct gaaaacccat cgacttcagt tgcgtcacgt
    14881 cgacttcttt cgggtcgaca ggatacgcat caataccacc ttcacgcagc ccggctaaca
    14941 ccgctgcgcc agaattcaga gaaacttccc gctcagcgga agtcccgccc aacaggaccg
    15001 cgattttatc agtcatgttg ttcttcctcc ggagtttgcg gcttcagttt gatttcagct
    15061 aaagaacggg caatttttcc gatattacca gccccctgaa cgagaatcag gtcgttaccg
    15121 gttaataccg gtgccagcat ctcggctacc tgcgcagggt ccggcaccag aatgggatca
    15181 attttcccac gtccacgaat tgtgcgacac agcgaacggc tgtccgctcc cggaattggc
    15241 gcttcgccag ccggatacac ttccagcatc aacagggtat caacctgtgt cagcacattg
    15301 gcgaaatcat catacaggtc gcgcgtacgg gtaaaacggt gcggctgaaa cagcattacc
    15361 aggtttttat ccggccagcc tgcgcgcgcc gctttaatgg tggcgtcaac ttccgtcggg
    15421 tggtggccgt agtcatcgac cagcattgcc gtaccgcttt taccattcac tggctccagc
    15481 gggaattcac cgaggaaatc aaaacggcga ccagtcccca ggaagctctc cagcgcacgc
    15541 aaaatagcct cgtcgtcaat tccctcttcc gtagcaaccg caaccgcagc tgcggcgttc
    15601 agcgcgttat gacggcctgg cgcattcagg gtgacgcgca tcggctcttt gtcctggcgc
    15661 agcagcgtaa agtgcccctg cgggccaatc tgctgataat cttctacacg cacgtcggca
    15721 tcttcgctga agccgtaagt cgtggtctga cgtcccacac gcggtaacaa ttcgcggatc
    15781 accggatcat caacacacat caccgcacga ccgtaaaacg gcaggttgtg cagaaaatta
    15841 ataaaagtct gttttaaatt ctcaaagtcg ccctggtagg tatccatgtg gtcggcttcg
    15901 atattggtga caatcgccac catcggttgc agatgcagga acgatgcatc actctcatct
    15961 gcttcggcaa tcaggtaccg accatgcccc aaacgcgcat gaacccccgc cgcttttacc
    16021 agcccgccgt taacgaaggt tgggtcgagc cccgcttctg cgtagatgct ggaaaccatc
    16081 gcggtggttg tcgttttgcc gtgcgttcct gcaatggcga tgccatgacg aaaacgcatt
    16141 aactcagcca gcatttcggc acgacggatc accggaatac gcgcttcatg agctgcgaca
    16201 atttccgggt tatcggcaga aatggcgctg gaaacaacga ccacgctggc atcacgtacg
    16261 ttttccgggc gatggttgaa ataaatcgtc gctcccagat tcattaactg ctgcgtgacc
    16321 ggatttggcg ctaaatcgga accactgatc tgataacctt cattggccag aacttcggca
    16381 ataccgccca taccggcacc accgatgccg acaaaatgta tgtgccgaac gcgacgcatt
    16441 tcgggcacga tggaacgcag ttttgccaat tgttgtgtat tcattcttta cgccattaac
    16501 ttcttaaatt catacgatgc aaaaggcatc gctacaatta cgcccgggca gcccggctca
    16561 cttcatttgc cactcgctcg gtggcatccg gaatggatgc agcgcgggcg cgttctgcca
    16621 tggttaataa ggtttctcgc gaccacccgg ccagggtgtt ggcgacagca tccacgctaa
    16681 gctgtggctg ctcgataatt ttggctgcgc ccgctttttc cagcggtagc gcattccagt
    16741 attgctggcg gtctttatgt tgaaacggca caaacaacgc cggtagtcct gccgcggcga
    16801 tttcactcac cgttaaagca ccggagcggc aaacgacgac atccgcccac gcatacgccg
    16861 ccgccatatc atcaataaat tccgtcactt tatgctgcgg ttgccccgct tcggcatacg
    16921 cctgttcaac ggattgttgc gaacctttac cgctctgatg ccagatagtg actgaatcac
    16981 ccagtttcgc agcaacctgc ggcattgtct ggttaagaat gcgtgcgccc tgggaaccac
    17041 ccactaccag cacacgaacc ggaccttcac gtccagccaa acgttgctgc ggcaacggca
    17101 gcgccagcac atcgatacgc accgggttac ccaccacttc cgcattaggg aaagcgcctg
    17161 gaaacgcctg catcactttg gtggcaatct tcgccagcca tttattggtt aagcccgcaa
    17221 taccgttttg ttcatgaagt acaaccggaa tgcctaacga ccacgcggcc agaccacctg
    17281 gacctgatac atagccgccc ataccgagta ccacgtcagg tttgtacgct ttcataatcg
    17341 cccgcgcctg acgccaggcg ttgaagatac gcagcggcgc agctatcagt gcttttatac
    17401 cttttccacg cagaccagag atacgaatga aatcaatttc gatgccatgt tttggcacta
    17461 agtccgcttc catacggtcg gcagtcccca gccagcgaac ttgccaaccc tgagccatta
    17521 gatggtgcgc aaccgccagt cccgggaata catgtccacc ggttccgcct gccatcacca
    17581 ttaatcgctt tccttgacca ctcatcgtga acctcgtaca aacgcctgcg ctttctccag
    17641 acgcgtttca taatcaatac gcaacagcat catgatggct gtcgacataa tcagtaagct
    17701 cgaaccaccg taactgatca gcggcaatgt cagacctttg gtcggtaaca tccccgccgc
    17761 cgcgcctacg ttaaccagcg cctggaagct aaaccagatg ccaatagaac aggcgagaaa
    17821 accggaaaaa cggtggtcaa tttctaacgc tttgcggcca atcgacatcg cgcgaaaagc
    17881 gacgaagaat accattaaaa gtgccagcac cacaccgaca taccccagtt cttcgccgat
    17941 aatggcgaaa ataaagtcag tgtgcgcttc cggcagatac tccagttttt gtaccgagtt
    18001 acctaaacct tgtccccaaa gttcgccgcg accaaacgcc atcagcgatt gcgttaactg
    18061 atagccgctg ccaaagggat cttcccacgg gttccagaat gcggtaacac ggcggatacg
    18121 gtacggttcg gcgagtatca gcaacacaac cgctgaaatg cccataccga taatggcaat
    18181 gaactgccac aatttcgctc ccgccaggaa caacatcgcc agcgtagtca caaacaccac
    18241 caccaccgta ccaaggtctg gctgtgccag cagtaacact gccaacacca gaatcacgcc
    18301 catcggtttc aggaagccgc gcaggttatt acgtacttcg tcgcctttac gcaccagata
    18361 gttggcgata taacaaaaca gcgacagttt tgtcagctcc gcaggctgga tacgcagcaa
    18421 accgagatcg atccaacgcg atgccccttt aaccgagcta cccactacca gcacgatcat
    18481 cagcaggatg atagatccga gcagcatcgt ggcactgtag cgttgccaga actccatcgg
    18541 cagacgcagc gtaatgatcg ccagaatgaa tgccaggatc agatagacgc catcacgctt
    18601 cgcgaagaag aacggatcgt tggttaagcg ttgccctatg ggcattgacg ccgaggtcac
    18661 catgataaag ccaatcgccg caaggccgaa ggtcagccac agtaaggtgc gatcgtacat
    18721 gatcaggctg tcggtatctt tttcccgcga gcccatcacc cagcctttta gcgccgtgga
    18781 gatccagacc aggatactga atcctggcag gcgcggcatt ttcaggcgag ggagagataa
    18841 acgcatcaac ctaactcctt cgccagacgg gcaaactcat tgcctcgttg ttcaaagttc
    18901 ttgaactgat caaggctggc acaggccggg gagagcagaa ccatatcgcc cggctgaaca
    18961 cgcggagcca gcaagcgcat cgcctgttcc atagtttcgg tttgttctgc cacttccggg
    19021 cgtagcgccg ccagctgcgc accgtcacga ccaaaacagt acaaacgcac gttgtcgcca
    19081 ttcagatagc gcgccagtgg actgaagtcc gccgatttac catcgccgcc cagcaacaaa
    19141 tgcagcgtgc cgtctacctg caagccattc aacgccgctt ccgtactgcc gacgttagtg
    19201 gctttcgaat cgttaatcca gcgtacgcca ttgtgctcca gcaccacttc aaagcgatgc
    19261 ggcagaccgg tgaaggtggt taacgctttc aggctgctgg cgcgcggcaa accagctgcg
    19321 tctgccagtg ccagtgctgc cagcgcattg gtgtagttat gctgcccaga aagtttcatc
    19381 tctttcacgt tcagcacttt ctcgcctttc actcgcagcc aggtttctcc ctgctgatga
    19441 ttcaggtgat agtcacccat gttgacgcca aagctgacgc agcgttcatc agcaccgcga
    19501 atcggcattg ttaaggcatc atcagcattg acgacacaaa ctttcgcatt ttcgtaaata
    19561 cgcaattttg ccgcacggta ttgctgcaaa ccaaacggat agcggtccat atgatcttca
    19621 gtcacgttca gaatggtcgc cgccaccgcc tgtaagctgg aagtggtttc cagctggaag
    19681 ctcgacagtt ccagcacgta cagttcgcac tcagcatcaa gcagcatcaa cgctggcagg
    19741 ccaatattgc cacccacacc aacgttaacc cccgccgctt tcgccatttc acccactagc
    19801 gtggtgaccg tgcttttgcc gttagaaccg gtaatcgcca caatcggtgc ttgtgcttcg
    19861 cggcagaaca gctcgatatc gccaacgatt tcgattccgg catcagcggc agcgcttaag
    19921 gatggatgcg cccgtgcaat accgggactg gcgacaatca gatctgccgc catcagccat
    19981 tcatcattca gactgcccgt gtggcgttct acggcttcgg gtaatttatc caggccaggc
    20041 ggtgtcatac gcgtatccat aacgcgcggc gtcacaccgc gagcgaggaa aaagtccacg
    20101 caggaaagcc cggtgaggcc caggccgata atgacgacat ttttaccctg ataatcagcc
    20161 atgattaacg taccttcagc gttgccagac caatcagaac cagcatcagc gaaataatcc
    20221 agaaacgcac aatgacgcgc ggttccggcc agcctttcag ttcatagtgg tgatgaatcg
    20281 gtgccatgcg gaaaatacgt tgtccgcgca gtttaaagga gccgacctgc aggatgacag
    20341 aaagcgtttc taccacgaac acgcccccca taatcaccag caggaattcc tgacgtagca
    20401 gtacggcgat aatgcctaac gcaccaccta acgccagcga acctacatcg cccataaaga
    20461 cctgcgccgg ataggtgtta aaccacagga agcccagtcc tgccccgact atcgcggtac
    20521 agacaataac cagttccccg gcgtgtcgca gatacggtat gtgtaaatag ctggcaaagt
    20581 tcatgttgcc ggtcgcccac gccaccagcg caaaaccacc ggcgacaaat acggtcggca
    20641 taattgccag gccgtcgaga ccatcggtca ggtttaccgc gttgccagta cccacaatga
    20701 cgaagtaagc cagcagaatg tagaacagcc ccaactgcgg catcacatct ttaaagaatg
    20761 ggaccaccag ctgcgttgcg ggcgtgtctt tgccggcaag gtacagggcg aaggcgacac
    20821 ccagcgcaat gaccgacatc cagaaatact tccaacgagc gatcaaccct ttggtgtctt
    20881 tacgcaccac tttgcgataa tcatcaacaa agccaataac accgtaacct accagcacca
    20941 ccaacacgca ccagacgtac ggattggacg ggtaagccca cagcagtacg gagatcacaa
    21001 tcgccgtcag gatcataatc ccgcccatgg tcggcgtacc gcgcttgctg aagtgtgatt
    21061 caggaccgtc gttacgcacc acctgaccaa aggaaagttt ttgcaaatga gcaatcatac
    21121 gcgggcccat ccacaatgag atgaacagcg cggtcagcag gctgacgatg gcgcgaaacg
    21181 tcagatagga aaagacgtta aagccggaat aatatttgac caaatgttcg gccagccaaa
    21241 ctaacatgtc ccattctcct gtaaagcgcg tactacctct tccatggcgg cactacgtga
    21301 acccttaact aaaatcgtaa ttacctgttg ctcagcaatc agtgatttaa gacgcgtaat
    21361 taacgcagtt ttatcagcaa aatgttcgcc aacgccgctg gcggtgctga tagcatggct
    21421 ttgtttaccc acgcttaaca cgcggtcaat accagcagct tttgccgcct cgcccacctg
    21481 tacatggcag gcttcgcttt cagcgcccag ttccgccata tcgcccacca ccagcacgcg
    21541 gtagcccggc atttcagcca gtacctgaac agcggcggtc attgaaccga cattggcgtt
    21601 gtaggagtcg tcgagcagca actggttttc tgccagttgg atggggaaca gacggcctgg
    21661 aacagctttc agatttgcca gccccgcttt gatagcatca agcgttgcgc ccacggacat
    21721 ggagagcgca gcggctgcca gcgcattcgc aatattgtga cgccccggca acggcagcag
    21781 aacatcgacg ctaccggttg gggtttgtag ggtaaattcc gtaccgtgcg aggtcacatg
    21841 gatattggtg gcggtgaaat cgctgttggc ggcattgggt gagaaacgcc acactttgcg
    21901 tgagccaatt acgctctgcc agttcagcca gtcgttgttg tcggcgttca taatggcgat
    21961 accgttttcc ggcaggccgc taaagatttc acctttcgct ttcgcgacac ccgcaagcga
    22021 gccaaaacct tccagatgcg ccgctgccag gttgttgacc agcgcagctt ccgggcgagt
    22081 cagactcaca gtccaggcta tttcgccctg atggttcgcg ccaagttcaa taactgcgta
    22141 atcgtattcc ggcgttaagc gcaacaacgt catcggtaca ccgatgtcgt tgttgagatt
    22201 gcctgccgta taaagcgtgt tgccgcactg gcttaaaatc gccgccgtca tctctttaac
    22261 ggaggttttg ccggaggaac ctgtcagagc aaccacgcgc gccggaactt gctggcgaac
    22321 ccatgcagcc agttcaccaa acgccagacg cgtatccttg acgattaact gcggcaggtc
    22381 gatatccagc ggacggctga ctagtagtgc gcccgcgccg ccagctttcg cctggtcggc
    22441 aaaatcgtgg gcatcaaaac gttctccttt cagggcaaca aacaggcagc ccggcgtcag
    22501 ttttcgggta tcagtggtta cagcatcaag ggtgatatct gcaccttgca gttcaccgtt
    22561 gagaatgtcg gtaagttggc taagggttac gctaatcatg caatcacccc cagcagacgc
    22621 gccaccgtga cgcgatcgga gtagtccaga cgctgattgc caacaatctg gtaatcttca
    22681 tggcctttgc ccgcgaccag caccacatcg ttctctttag cctgcataac ggcgcaagtc
    22741 accgcttcag cacggccttc catcactttg gcatgtccgg catctaacat tcccgccaga
    22801 atatcgttga tgatggcacg cggttcttcg gtacgcgggt tatcgtccgt caccaccgcc
    22861 acgtcagcaa actcttcggc aattgcgccc atcagtggac gcttaccttt atcgcgatcg
    22921 ccaccacagc caaagacaca ccacagcttg cccgcacagt gcagacgcgc cgcctgtaag
    22981 gctttttcca gtgcatccgg cgtatgcgcg taatccacca ccaccgtcgg tttgcctggc
    23041 gcagtgaaca cttccatacg tccgcaaacc ggttgcagac gcgcggcggt tttcaacaga
    23101 tcagccaatg gatagccgag tgccaacagt gtcgccagcg cgagcagcag gttgctgacg
    23161 ttaaaagcgc ctatcagatg gctttcaatt tcgccatcgc cccaacttga gctaaagcga
    23221 atcgtcacac cgctgtcgtg atagttcacg tcgatcactt ttaaccagcg tccgtgacag
    23281 ttcggattaa tatgatcttc cattgatacc gcaaccgcgt ccggcagctt tgccagccaa
    23341 cggcggccca cttcatcgtc ggcgttaata atcgcctgac cgcaatgatg ttcagaataa
    23401 agcagccatt tcgcagcttc gtagtgttcc atatcaccat gataatcaag gtgatcgcgg
    23461 cttaagttgg taaagaccga cgccgcaaat ttcaatgccg ccacacggtg ctgtaccagc
    23521 ccgtgggagg aaacttccat tgcgcaaaac gtcgcgccct gctccaccag ccccgccagc
    23581 tcatgctgaa catcgactgc cgaaccggtg gtattttctg tcgggatcac tttccccagc
    23641 agaccgttac caacggtgcc cattaccgcg ctggtttcgc caagcagttg gctccactgc
    23701 gccagcagct gggtagtcgt ggttttgccg ttggtgcccg ttacgcctac gagacgtaaa
    23761 ttgtcagagg gttcatggta aaagcggccc gccagtgcag ataaacgctc gttgagctgg
    23821 ctgagataga tgaccggtac gccgtgcatt tcacggattt caccgtcggt cgcctcatct
    23881 ttcgcctctg caataatggc agccacacct tgcgctatcg cctgcgggat atatcgacgc
    23941 ccgtccgcct gatgacctac tacagctaca aagagatcgc ccgccgcagc cacacggctg
    24001 tcgagtgtca tctctcgcag tgctcgcgaa ggtgcgtctg gcacccacgg agcaagaagg
    24061 tcgcgcaaat tacgatctgc cacctgtccc ctcgccttga ttaatcacaa attcattttt
    24121 atcgcccgtt gtcagcgcat ccggctcgat gttcatggta cgcaatacgc cgcccatgat
    24181 ggcaccaaag accggcgcgg aaacggcgcc gccgtagtat ttacccgcct gcggatcgtt
    24241 gataacaaca accagcgcga agcgcggctg actcgcaggc gcaacgcctg cggtataagc
    24301 aatatattta ttgatgtagc gaccgtccgg cccgaccttt ttcgcggtac cggttttaat
    24361 ggcgatacga tagcctttaa tcgccgcctt cacgccgccg ccgcccggta gcgccacgct
    24421 ttccatcata tgcaccacgg tgcggacaat ggattccggg aagacacgtt caccgggaac
    24481 cggggggtca actttggtaa tcgacagtgg gcgataaatg ccgtagctgc cgatagttgc
    24541 gtagactcgc gctaactgta acggtgttac cattagcccg tagccgaaag agaaggtggc
    24601 cctctctatg tcagaccacc gttgtttttg aggatataag ccactgcgtt ctccgaccaa
    24661 ccccaaattg gtcgcttttc ccagtccaaa acgtgagtaa gtatctacta acgctgagga
    24721 cggcatcgct aacgccagct tggaaacacc gacgttactc gacttctgta ataccccggt
    24781 cagggttaat tcgctgtagc gtgccacatc tttgatttcg tggccgttaa ttcgataagg
    24841 aatggtattg agtaccgagt tttcccgcac cacgccacgt tgcaacgcgg tcatcaccac
    24901 catcggttta accgttgagc ccggttcaaa cacgtcggtg atggtacggt tacgcatcgc
    24961 ctctttcggc gtgccgctca gattgttagg gttgtatgac gggctgttag ccatcgccag
    25021 cacttcacct gtgttgacat ccaccagcac ggcgctacca gattcagcct tgttaaaggc
    25081 caccgcgttg ttcagttcgc gataaaccag cgcctgcagg cgttcatcaa tactcagcgc
    25141 caggttgtgt gctgcctggc tgtcagtaga agaaatatct tcaattacgc gaccatagcg
    25201 gtctttacgc acaatgcgct cacccggctg cccggtaagc catttatcga aactcttctc
    25261 aacgccctca atcccttgac tatcgacgtt agtaaagcca atgaggtgag cagtcacttc
    25321 gccggatgga taataacggc gagattcttc acgcagatga atacccggca gtttcagttt
    25381 tttgatgtag tccgccatgt cagggtttac ctgacgcgcc agataaataa agcgcccttt
    25441 cgggttggcg ttaatgcggg cagaaagctg atccagcgga atattgagcg cgttagccag
    25501 cgccttccag cggtcaccga cgctgatacc gccagcgtca tgcacttctt tcgggtcagc
    25561 ccaaatcgct tttaccggca cgctcaccgc taacgggcga ccagaacggt cagtaatcat
    25621 gccgcgggag gtggaaactt gctgaacgcg aagagaacgc atgtcgccct ctttcaccag
    25681 catatccggg gagataactt gtaaccacgc tacgcgtccg agcagaaaag ccagcgccag
    25741 gagaatacag ccgcataaca acgcaaaacg ccaactaata aagttggcat gttcttcctg
    25801 acgttttggt ttctgcgttt tcgccgctgc tttcatgcgt cgcgtttatc cttatttttg
    25861 cactacgata ttttcttgtg acggatcaac atgctgcatt tgcagctttt ccgtggcgat
    25921 cctttccacc cggctatggt cgccgagcgc attctcttca aggatcaggt tgcgccattc
    25981 aatgtctaaa gcatctcgct ccagcaccag ttgttcgcgc tgagcggtca gtaaacgggt
    26041 atggtgcgcc gtggttacca cggtcaccgc cgtcaaaata atgcaaatga acaggcagag
    26101 tggcagcttc ccaaatcgca aaagatcgtc accgataaca ccaggcaatg catggcgctc
    26161 gtggcttccc atcgatcctt taactttgct tagagcttct gtcactctgc tgatcatgcg
    26221 ttcgtcctct ctgcgatacg cagaactgaa ctacgggcac gaggattctc agccacctct
    26281 tcttcgcccg gcattaactt gcctaatgct cgcagctgac ggccacccag ttttttgagc
    26341 tgctcttcag tcatcggtaa ccctgccgga acttgcggac cgcggctgtt ttcacgcata
    26401 aaacgtttca caatacggtc ttccagcgag tggaagctga tgatcgaaag ccgcccaccc
    26461 ggggccagca cgttgagcga gctttttagc gcctgctcta tctcctccag ttcactgttt
    26521 acccaaatgc gcaccgcctg gaaggtacgg gtcgcgggat gtttaaactt atctttcacc
    26581 ggcgttgcag cagccacgac ttccgccagt tctttggtgc gggtcatcgg ctgttcgcgg
    26641 ttacgctcga caatggcgcg ggcaatgcgt ttggcaaaac gctcttcacc ataggttttc
    26701 aatacccagg cgatatcggc ttcttctgcg gtttgtagcc attcagcggc tgactgccca
    26761 cgggttgggt ccatacgcat gtccagcgga ccatcgcgca taaaggaaaa gccacgttca
    26821 gcatcatcaa gttgcggtga agagacgcca agatcgagga gaatgccgtc gatcttgccg
    26881 ataagatcgc gctcggcaac gtattcgccc agcgcggaga aaggtccgtg gatgatggag
    26941 aagcgcggat catcaatagt cttcgcaacg gcgatagcct gcgggtcgcg atcgatcgcc
    27001 agcaaacgcc cctcttcgcc aagctgcgag aggatcagac gtgagtgacc accgcgacca
    27061 aaagtcccat caatgtagat gccatcagga cggatattga ggccattaac ggcttcatcc
    27121 agcagcaccg tagtatgttt atagttttcc atcattttat agagacaagt cctgcagtcg
    27181 ctccgataag tctccagtag ccaactgctc tgcgtcgata tcttccttga cctgttgatg
    27241 ccaggttgtt tcatcccaca gctcaaactt gttgaactgt ccaaccagca tcacttcttt
    27301 tgtcagcccg gcatgttgcc gcagtactgg cgcgattaac aatcgacctg cgccatccat
    27361 ctgacattcg ctggcatgac ctaacagtag gcgctgcaca cggcgctcaa ctgggttcat
    27421 gctcgacaga cgcgataatt tttgctcgat aatttcccat tcaggcaggg ggtaaagcag
    27481 caggcacggg tgatgaatgt caatggtgca aaccatttga ccggcagcgt tctcaagcag
    27541 ctgttcccga taacgggtag gcactgataa gcgccctttg ctgtcgagat tgactaacgt
    27601 tgctccccgg aacatgccag cctcacccct tattcccact ttgccccaca atttcccact
    27661 gaaaggagtt tacggagcgg aggaaaagct tgtcaagcca gtcacaaggc ataccgaggt
    27721 aaaaaacccg atgtttacgg ctaatatcag cgttgtttat tttacgtcca acgcgcgaag
    27781 caaattaacg ttatgaatag ctgtaagaaa aaatccctca tcgtcatcac tgttttaaaa
    27841 tgactcacta ttttccacag caaatataaa gtgtcagttt gcgacgcgag cggcatttta
    27901 ggacatatct tccccggtta acagtccttg ttacgtctgt gtggcgcttg atgccagcgg
    27961 gtttgcgcaa aagcaaagaa aagtgtttgt taaatcggca attcatcgcc gcatgtaaca
    28021 aaataatgca aaaacgcgct gtcgatatca cttaattatt gtgaatttca gctggtgagt
    28081 taattaacgg gcgggtttaa aaccatttat caataatagt caggaatagt cttatttact
    28141 ttaagcatat tgatgtccag tcccgtactc tacgcgccag agggaaattc acctggcgcg
    28201 tatttttgtt cgcggcttag ctacggctga gcacaccgcg gcgatagaga ttacgtttaa
    28261 tgcgcgttaa accaggtttt ggcttacgcg gttcgtccag gcttgccagg acaatctcca
    28321 gcacacgctc tgcgacatcg cggtgacgtt gagccactgc cagcaccggg cactgtaaga
    28381 agtcgagcag ttcgttatcg ccaaaggtgg caattgccag gtcagaaggc agtttaccat
    28441 cgcgacgtag cgtgacatcc atcacccctt gcaacaacgc aaacgacgtt gtgaacagcg
    28501 cctgcggcat cggatgcgtt tccagccatt tttcgaataa ctgggcagcc gcctcccgct
    28561 catagctgtt ggcatacagg aaatgcactt cgcgcggatc atctttccag gcagtacgga
    28621 aaccttgttc acgcaggaag ctgacagaaa gctccggcag cgcgccaaga taaagcaccg
    28681 tctcggcggg aaacttacgt aactcttccg ccagcatttc ggcatcatcc tgatcggcac
    28741 caaccacgct ggtgaaatgt tcacgatcga gggcgcggtc cagcgcgaca atcgggaacg
    28801 ggtcgttagc ccagcgttga taaaaaggat gctcaggtgg caacgacgtc gaaacaataa
    28861 tggcatcaac ctgacgctgt aaaaggtgct caatgcagcg catttcgttg tctggctgat
    28921 cttctgagca ggcaatcagc agttgataac cccgttgccg cgcctggcgc tcaagatagt
    28981 tagcgatgcg ggtatagctg gtgttctcca gatcggggat cacaagacca atagaacgtg
    29041 tgcgtccagc acgaagccca gctgccacgg cgttcgggtg gtaattgtgc tcacgcacca
    29101 cagccatgac tttttcaacg gttttgtcgc tcacacggta ttgcttcgct ttgccgttaa
    29161 taacatagct tgcagtggtc cgcgacactc ccgccagccg agcgatttca tccagtttca
    29221 caattgcccc ttgcgtaaaa tgtaaaaacc atagccattg tactggtatg ggttaaattc
    29281 attaacatct aagcgcagaa aattaactgc ggcaactgct tttattccag gttcccactg
    29341 atttcgcaaa aaaagcccaa cgtgacatgt tgggctgcaa attgcacact gagatcattc
    29401 tcaacgcatt attttatcgc cgcgcgaaag tccgaccaca ccagagcgag caacttccac
    29461 aattttcgcc acctcgcgaa tcgatgctaa aaatgcatca agcttatcgc tggtgcctgc
    29521 taattgaacg gtataaagcg agggggtgac atcgataatt tgcccacgga atatttccgt
    29581 attacgtttc acttcgtcac gcccgtaacc gctggcctga attttcacca gcatgatttc
    29641 ccgctcaaca tgcgcgccct gccccaactc actcacgcgc aagacatcga ccagcttgtg
    29701 taattgcttt tcgatctgct caagtacttt ttcatcgccc acggtctgga tggtcatacg
    29761 cgataatgtc ggatcgtcgg ttggcgcaac ggtcaggctt tcaatgttgt agcctcgctg
    29821 ggaaaaaagg ccaatcacgc gggataacgc gcctgattca ttttcgagta agactgataa
    29881 tatccggcgc ataatcaggt tctctccgtt ttgcttaacc acatttcatc cattccgccc
    29941 ccgcgaatct gcatcgggta gacgtgctca ctgccatcga cggtaacatc aacaaacacc
    30001 aggcgattat tgcgcacctg ttccagcgcc tcgctaagtt tgctttccag ctcatgcgga
    30061 tgagagatct ggatcccgac gtgaccatag gcttccgcca gacggacgaa atcgggtagt
    30121 gattgcatat aagattgtga atgacggccg gaatagatca tgtcctgcca ctgtttcacc
    30181 atccccagat agcggttatt gagattcacc accagtacgg gcaactcgta ttgcaacgcg
    30241 gtagacagtt cctgaatgtt catctgaata ctgccgtcgc cagtgacgca aaccacggtt
    30301 tcttctggca acgccatttt gacgcccagt gccgcaggta aaccaaaacc catcgtgccg
    30361 aggccaccgg aattgatcca gcgacgcggt ttgtcgaatg gataataaag tgcagcaaac
    30421 atctggtgct gcccgacatc ggacgtcacg taagcgtctc ccttcgtcaa ccgccaaaga
    30481 gtctcgatca ccgcctgcgg tttaatcttt tcactgtgag tgtcatattt caggcactga
    30541 cgagcgcgcc actgttcaat ttgctgctac cagtcgcgga tctcatccag tggttgatgg
    30601 gcggattctt gcgacaagag ttcaagcatt tgttcgagga cctggcgagc atcccccaca
    30661 atcgggatat ccgcagtcac ggttttagaa atggaagtag gatcaatatc gatatgcaga
    30721 acagtggcat ttgggcagta ctttgccaga ttgttcgtcg ttcggtcatc aaatcgtacc
    30781 ccgacggcga aaatcacatc cgcgttatgc atcgtcatat tggcttcgta ggtaccgtgc
    30841 attcccagca tgcccagtgc ctgacgatgc gttgccggaa acgcccccag ccccatcaat
    30901 gaggaaacaa cgggcagatt caacgcctcc accgtttctt tcaactgctg atggcagccc
    30961 gccatgattg ccccaccgcc tacgtagaca accggttttt ttgccactac cagcgtttgc
    31021 agagcacgct taatttgccc tttatgtccg gtagtagtgg gattgtaaga acgcatactg
    31081 accgactccg gccagacata gggtaatttg ttcgccggat taagaatatc tttcggtaaa
    31141 tcaacgacta ctggtccagg acgaccactt gccgccagcc agaaagcctt tttcagcacc
    31201 tgcggaatgt cttccgtttg cttaaccaga aaactgtgtt taaccactgg tcgcgaaatc
    31261 cccaccatgt cgcactcctg aaaggcatcg taacctatca acgaggtcgc tacctgcccg
    31321 gaaaggacaa ctaatggaat ggaatccata taagcggtgg cgatgccggt aatcgcattg
    31381 gtcgcccctg gacccgacgt taccagcacg acgccgactt ccccggtcgc gcgcgccaga
    31441 ccatcggcca tatgcactgc cgcctgctca tgacgaacta aaacatgatc gataccacac
    31501 acggtatgca atgcatcgta aatatcaagg actgcgcctc caggataacc gaatacttgt
    31561 ttaacgccct gatcgataag cgatcggacg accatctcgg ctccagacaa catctccatg
    31621 gcctgcctca ctgtttgatg gaaaaaatgt gtaaaacaca ttaaccgtcc gatcttgctt
    31681 aagcaattgg cagccagaga cataaacgca gggtaataag aataaacagg aggaaaggtg
    31741 aaaagaaacg ataaaatcct ccattacgaa ggattaaatt gataataaat cggctgaatc
    31801 ccacaactta cagcaatttc tctatttttt taattaatcc taaaatagag agcccacaca
    31861 ttcagaataa aattctacat tcaataaaaa atgcagaata aaccagacat tcatgtctga
    31921 cctattctgc attcagttag cgtttgcaaa ttgagactaa ttgttcttcc atccactgat
    31981 ggcctttatc gcgcccggca gcttcatgcc atgagagata acaggttctg ctgttttgtt
    32041 ttaacagcag cggtaatacc tgtaattcta aggattcagc gaactcttca gccagccaac
    32101 gcggcgcaat agcgaccaaa tgcgtttgcg acaccacgct aagtacgctc atcattgcca
    32161 tgccctgata cgcgatactg gcttgcttat ctaccgtgtc ataccaaggt tgactaaatg
    32221 acgcgaaacg atcgagcgaa accgccgcat gttgttcgtt ataaacatca tgtttcagta
    32281 acgggccttt aattgttgga tgatttttgc tggctaccag caccatttca tctttaaata
    32341 atggcacgct ggtaaattca ggacgatgga agtcttcata actaatcaca aactccgttt
    32401 cctgataacg cagctgatgt tcagtgttct gatttaatga agacttgaac ataacatgta
    32461 tatttggcgc aatctgctca atgtgattat aaatctgcga ggtcagaatg ctgtctaacg
    32521 ggctgcaaac acaaagatga aatacacgtt cactactcgc gggttcaaaa cctgaaccag
    32581 gcaattcatt ttgtactagt tgcaatgcct ggcgaactga accaaaaagt tgaaatgcgc
    32641 gagcagtcgg ttgaatacca cggccataac gaacaaaaag ctcgtcatta aacatcacct
    32701 tcaggcgtgc aacagcgtta ctgaccgcag gttgcgacat acccagaaca tgagcggcac
    32761 gggtaatgtt ttgctcctgc atcacggcat cgaaaacggt taataagttg agatcgacca
    32821 tgcgtagctg tggcttgctt aactccgccg tctctgaatg atctgtttgt acctctggca
    32881 tacttaactc cactgtcaca cttaactccc tttcccttat tggaatgcag agaaataatc
    32941 ctgaagaata tgatttatca tgcatataaa ataagaaaaa gcaaaatgag taaaattcgg
    33001 aaaacataaa gatacgggtt ctgataaaaa cagaatccat tgccgtggaa tgagtcattt
    33061 accacagcat aataatccat aatgtttttg ttgcgaaaac aatctaatca taactaccgc
    33121 gaatactcaa tcatctacaa aatggattaa atgtgcttat ttaataatta atttatatat
    33181 ttaatgcatt aattattaac attaatggat caataatatt caccaaatca atatcaaaaa
    33241 aaattcgcaa aacatataat tcaatacaaa tcatcaggat aggttttgca acgcgtgcat
    33301 tttgtcccct ttttcctcgt tgattagatg caaaaattta ttctgaaata tgtcaaccta
    33361 tgaaaagtgt cggtcgttaa acagaaatta atatcgcttg ctttaaccac cgcagcacaa
    33421 ttagctaatt ttacggatgc agaactcgcg ctggcgggac gtttttattg cgtcagggtt
    33481 gacatccgtt tttgtatcca gtaactctaa aagcatatcg cattcatctg gagctgattt
    33541 aatgactcac atcgttcgct ttatcggtct actactacta aacgcatctt ctttgcgcgg
    33601 tagacgagtg agcggcatcc agcattaagc cagcacgcag tcaaacaaaa aacccgcgcc
    33661 attgcgcggg tttttttatg cccgaagcga ggcgctctaa aagagacaag gacccaaacc
    33721 atgagccagc aagtcattat tttcgatacc acattgcgcg acggtgaaca ggcgttacag
    33781 gcaagcttga gtgtgaaaga aaaactgcaa attgcgctgg cccttgagcg tatgggtgtt
    33841 gacgtgatgg aagtcggttt ccccgtctct tcgccgggcg attttgaatc agtgcaaacc
    33901 atcgcccgcc aggttaaaaa cagccgcgta tgcgcgttag ctcgctgcgt ggagaaagat
    33961 atcgacgtgg cggccgaatc cctgaaagtc gccgaagcct tccgtattca tacctttatt
    34021 gccacttcgc caatgcacat cgccaccaag ctgcgcagca cgctggatga agtgatcgaa
    34081 cgcgctatct atatggtgaa acgcgcccgt aattacaccg atgatgttga attttcttgc
    34141 gaagatgccg ggcgtacccc cattgccgat ctggcgcgag tggtcaaagc ggcgattaat
    34201 gccggtgcca ccaccatcaa cattccggac accgtgggct acaccatgcc gtttgagttc
    34261 gccggaatca tcagcggtct gtatgaacgc gtacctaaca tcgacaaagc cattatttcc
    34321 gtacataccc acgacgattt aggcctggcg gtcggcaact cactggcggc ggtacatgcc
    34381 ggtgcacgcc aggtggaagg tgcaatgaac gggatcggcg agcgtgccgg taactgttcg
    34441 ctggaagaag tcatcatggc gattaaagtt cgtaaggata ttctcaacgt ccacaccgcc
    34501 attaatcacc aggagatatg gcgcaccagc cagttagtta gccagatttg taatatgccg
    34561 atcccggcaa acaaagccat tgttggcagc ggcgcattcg ctcactcctc cggtatccac
    34621 caggatggcg tgctgaaaaa ccgcgaaaac tacgaaatca tgacaccaga atctattggt
    34681 ctgaaccaaa tccagctgaa tctgacctct cgttcggggc gtgcggcggt gaaacatcgc
    34741 atggatgaga tggggtataa agaaagtgaa tataatttag acaatttgta cgatgctttc
    34801 ctgaagctgg cggacaaaaa aggtcaggtg tttgattacg atctggaggc gctggccttc
    34861 atcggtaagc agcaagaaga gccggagcat ttccgtctgg attacttcag cgtgcagtct
    34921 ggctctaacg atatcgccac cgccgccgtc aaactggcct gtggcgaaga agtcaaagca
    34981 gaagccgcca acggtaacgg tccggtcgat gccgtctatc aggcaattaa ccgcatcact
    35041 gactataacg tcgaactggt gaaatacagc ctgaccgcca aaggtcacgg taaagatgcg
    35101 ctgggtcagg tggatattgt cgccaactac aacggtcgcc gcttccacgg cgtcggcctg
    35161 gccaccgata ttgtcgagtc ctccgccaaa gccatggtgc acgtactgaa caatatctgg
    35221 cgtgccgcag aagtcgaaaa agagttgcaa cgcaaagctc aacacaacga aaacaacaag
    35281 gaaaccgtgt gatgtcgaag aattaccata ttgccgtatt gccgggggac ggtattggtc
    35341 cggaagtgat gacccaggcg ctgaaagtgc tggatgccgt gcgcaaccgc tttgcgatgc
    35401 gcatcaccac cagccattac gatgtaggcg gcgcagccat tgataaccac gggcaaccac
    35461 tgccgcctgc gacggttgaa ggttgtgagc aagccgatgc cgtgctgttt ggctcggtag
    35521 gcggtccgaa atgggaacat ttaccaccag accagcaacc agaacgcggc gcgctgttgc
    35581 ctttgcgtaa gcacttcaaa ttattcagca acctgcgtcc ggcaaaactg tatcaggggc
    35641 tggaagcatt ctgtccgctg cgtgctgaca ttgccgctaa cggcttcgac atcctgtgcg
    35701 tgcgcgaact gaccggcggc atctatttcg gtcagccaaa aggccgcgaa ggtagcggac
    35761 agtatgaaaa agcgtttgat accgaggtgt atcaccgttt tgagatcgaa cgtatcgccc
    35821 gcatcgcgtt tgaatctgcc cgcaagcgtc gccacaaagt cacctcaatc gacaaagcca
    35881 acgtgctgca atcctctatt ttatggcggg agatcgttaa cgagatcgcc acggaatacc
    35941 cggatgtcga actggcgcat atgtacatcg acaacgccac catgcagctg attaaagatc
    36001 catcacagtt tgacgtcctg ctgtgctcca acctgtttgg cgacattctg tctgacgagt
    36061 gcgcaatgat cactggctcg atggggatgt tgccttccgc cagcctgaac gagcaaggtt
    36121 ttggtctgta tgaaccggca ggcggctcag caccagatat cacaggcaaa aacatcgcca
    36181 acccgattgc gcaaattctg tcgctggcac tgctgctgcg ctacagcctg gatgccgatg
    36241 atgcggcttg cgccattgaa cgcgccatta accgcgcatt agaagaaggc attcgcaccg
    36301 gggatttagc ccgtggcgct gccgccgtta gtaccgatga aatgggcgat atcattgccc
    36361 gctatgtggc agaaggggtg taatcatggc taaaacgtta tacgaaaaat tattcgacgc
    36421 tcacgtagtg tacgaagccg aaaacgaaac cccgctgtta tatatcgacc gccacctggt
    36481 gcatgaagtg acctcaccgc aggcgttcga tggtctgcgc gcccacggtc gcccggtacg
    36541 tcagccgggc aaaaccttcg ccactatgga tcacaacgtc tctacccaga cgaaagacat
    36601 taatgcctgt ggtgaaatgg cgcgcatcca gatgcaggag ctgattaaaa actgcaaaga
    36661 atttggcgtc gaactgtatg acctgaatca cccgtatcag gggatcgtcc acgtaatggg
    36721 gccggaacag ggcgtcacct tgccggggat gaccattgtc tgcggcgact cgcataccgc
    36781 cacccacggc gcgtttggcg cactggcctt tggtatcggc acttccgaag ttgaacacgt
    36841 actggcaacg caaaccctga aacagggccg cgcaaaaacc atgaaaattg aagtccaggg
    36901 caaagccgcg ccgggcatta ccgcaaaaga tatcgtgctg gcaattatcg gtaaaaccgg
    36961 tagcgcaggc ggcaccgggc atgtggtgga gttttgcggc gaagcaatcc gtgatttaag
    37021 catggaaggt cgtatgaccc tgtgcaatat ggcaatcgaa atgggcgcaa aagccggtct
    37081 ggttgcaccg gacgaaacca cctttaacta tgtcaaaggc cgtttgcatg cgccgaaagg
    37141 caaagatttc gacgacgccg ttgcctactg gaaaaccctg caaaccgacg aaggcgcaac
    37201 tttcgatacc gttgtcactc tgcaagcaga agaaatttca ccgcaggtca cctggggcac
    37261 caatccaggc caggtgattt ccgtgaacga caatattccc gatccggctt cgtttgccga
    37321 tccggttgaa cgcgcgtcgg cagaaaaagc gctggcctat atggggctga aaccgggcat
    37381 tccgctgacc gaagtggcta tcgacaaagt gtttatcggt tcctgtacca actcgcgcat
    37441 tgaagattta cgcgcggcag cggagatcgc caaagggcga aaagtcgcgc caggcgtgca
    37501 ggcactggtg gttcccggct ctggcccggt aaaagcccag gcggaagcgg aaggtctgga
    37561 taaaatcttt attgaagccg gttttgaatg gcgcttgcct ggctgctcaa tgtgtctggc
    37621 gatgaacaac gaccgtctga atccgggcga acgttgtgca tccaccagca accgtaactt
    37681 tgaaggccgc caggggcgcg gcgggcgcac gcatctggtc agcccggcaa tggctgccgc
    37741 tgctgctgtg accggacatt tcgccgacat tcgcaacatt aaataaggag cagaccatgg
    37801 cagagaaatt tatcaaacac acaggcctgg tggttccgct ggatgccgcc aatgtcgata
    37861 ccgatgcaat catcccgaaa cagtttttgc agaaagtgac ccgtacgggt tttggcgcgc
    37921 atctgtttaa cgactggcgt tttctcgatg aaaaaggcca acagccaaac ccggacttcg
    37981 tgctgaactt cccgcagtat cagggcgctt ccattttgct ggcacgagaa aacttcggct
    38041 gtggctcctc gcgtgagcac gcgccctggg cattgaccga ctacggtttt aaagtggtga
    38101 ttgcgccgag ttttgctgac atcttctacg gcaatagctt taacaaccag ctgctgccgg
    38161 tgaaattaag cgatgcagaa gtggacgaac tgtttgcgct ggtgaaagcc aatccgggga
    38221 tccatttcga cgtggatctg gaagcgcaag aggtgaaagc gggagagaaa acctatcgct
    38281 ttaccatcga tgccttccgc cgccactgca tgatgaacgg tctggacagt attgggctta
    38341 ccttgcagca cgacgacgcc attgccgctt atgaagcaaa acaacctgcg tttatgaatt
    38401 aatccccttg cccggtcaaa tgaccgggct ttccgctatc gtccacgtca tcaaacgtct
    38461 ttaacctttg cggttaaaaa taatgcgaca acagaaataa ccgcaattac ccagtagaca
    38521 gcaaagtgcc cccaactttg tgcaattgct ccctgaataa cgccagccag aattaccccg
    38581 gtagaaatac tgttagtaaa taaggtggta gctgcccccg ctcttccagg cattaaatcc
    38641 tgaaaccata gcatcccaat acccgcaaca atgccgataa atacagcgtt aaaaagttgc
    38701 agcgtcatca acgccatacg gctatgaaag aaaatcaatc cggtgtaaaa cagtactcct
    38761 gccgccactg ctatgaccat cattcgccgc ttaccataac gtttgacata gtagccagcc
    38821 agaatcattg ctggtatttc cagtccagct gccgtcccca tcaggaaacc cgccagtttg
    38881 tctggcaatc ctaactcgct actgatccac aacggcatat caataatgta catggtgttg
    38941 caggtccaca ttaacgtcga ggcgacaaat aacatccgta cgttactatc ctgccagcca
    39001 ccttgcattg ataaagcatt ttccgacggc agttctaccc gcgccacaga cggaagcata
    39061 aatgcaatca ataccagact gagtgtgaat atcccggcgg caatcgaaaa catcaccact
    39121 tctcgcgccg agttatccgc atattcccgc gccagagcaa ataactgtgg cattgccgta
    39181 ttggccagag atgccagaag cacaccacag gtgataagcg tcagataatg acgattaaat
    39241 gcaaacaatg gcgcattgcc gatagccatc aaacagcaaa atataatcag ttttcgccga
    39301 tcgccctgac tgtcagaacg ttttgccaac cagaggctta cgccgatccc agcaatagta
    39361 ttcaccgtat aaaagagtcc gatccagaaa ggttgcgcgc caacctcacg actcagaaat
    39421 aagctcaatg taggagcctg tagcgccccg gccaccccca ttgccgcgta aacaccgttc
    39481 atacggcgag ccatcgtcat tatccagatc atacgttccc tttttagcgc ggcgagaata
    39541 aaaaaaacca gcaggtataa tctgctggcg ggtgatttta caccaatact cagtcacaca
    39601 tgatgcaggc aagtcaactt tcagaattgc ggtcatccca ctgcatcagt ccttcaagca
    39661 tggttaatcg ttgtgggacg cttaaccaac gcaaccagca caacttcgct gtcgcggtaa
    39721 aatagtgctg ataaaactga cgcatggggc acctccttgc ttcatcttta ggaattattg
    39781 acttaatata gggaaaataa aattgctgtc ttttgcgcag gagttcccct tttatgccat
    39841 ctgctcgtct gcaacaacag ttcatccgcc tgtggcaatg ctgcgagggt aaatcgcagg
    39901 acacaacgct caacgaactg gcagcgttat tgagctgctc gcgtcgtcat atgcgtaccc
    39961 tgctcaacac catgcaggat cgcggctggc tgacgtggga agcggaagtc gggcgcggta
    40021 aacgctcgcg tctgacattc ctctataccg ggctggcgct tcagcaacag cgggcggaag
    40081 acctgctgga gcaggatcgt atcgaccaac tagtgcagtt ggttggcgac aaagcgactg
    40141 tgcggcaaat gctggtttct catctgggcc gcagcttccg ccaggggcgg cacatcctgc
    40201 gcgtgctcta ctatcgtccg ttgcgtaatc tgctacctgg cagcgcattg cgccgttccg
    40261 aaacccatat tgcccggcaa atcttcagtt cgctaacgcg cataaatgag gaaaatgggg
    40321 aactggaagc agacatcgcc caccactggc agcaaatatc accgcttcac tggcgtttct
    40381 ttttgcgtcc aggagtccat tttcatcatg gtcgtgaact ggaaatggac gacgtgatcg
    40441 cctctttaaa acgaatcaat acgctgccgc tctattcgca tattgcggac attgtgtcgc
    40501 cgacgccctg gacgctggat atccatctca cgcaaccgga ccgctggtta ccgttactgc
    40561 tggggcaagt tccggcgatg atcctgccgc gcgaatggga aaccctcagt aactttgcca
    40621 gccatcccat cggcaccggt ccgtatgcgg tgatccgcaa caccaccaat caactgaaaa
    40681 ttcaggcatt cgatgacttc ttcggttacc gggcattaat cgatgaagtt aacgtctggg
    40741 ttctgccgga aattgccgac gagccagctg gaggtctgat gctaaaaggt ccacagggtg
    40801 aggaaaaaga gattgaaagc cgcctggagg aaggttgcta ctatttacta ttcgacagcc
    40861 gcacccatcg cggagcgaat cagcaagtca gggactgggt aagctatgtg ctttctccaa
    40921 ctaatctggt ctatttcgct gaggaacagt accagcaact gtggttcccg gcttatggac
    40981 tgctcccccg ttggcaccat gcccgcacca taaagagcga aaaaccggct ggcctggaaa
    41041 gcctcaccct gaccttttat caggatcaca gtgagcatcg ggtgattgcc gggatcatgc
    41101 agcagattct ggcaagtcac caggtcacgc tggaaatcaa agagatcagc tacgatcagt
    41161 ggcatgaagg agagatcgag agcgatatct ggcttaatag cgccaacttt acgctgccgc
    41221 tggatttttc gctgttcgcg cacttgtgcg aggtgccgct gctccaacac tgtattccga
    41281 tcgactggca agccgacgcc gcccgctggc gcaatggcga aatgaacctg gcgaactggt
    41341 gccagcaact ggtcgccagt aaagcaatgg tgccgcttat ccaccactgg ctgatcattc
    41401 agggacaacg cagtatgcgc ggcctgcgta tgaataccct cggctggttc gattttaaat
    41461 cagcgtggtt tgcgccgccg gatccatgat tgctggtaga taacaaaatc attacactaa
    41521 caccgttctc aacggggtgc cacgcaaacg cgtgcgctga gaaaataccc gtcgaacctg
    41581 atccggataa cgccagcgaa gggatttgag gctccttctc aagtcctttg ccactctttt
    41641 ttgaggtgca aagtgttaaa aaaatgtctt cccctgctgt tgctgtgcac agcgcccgtt
    41701 ttcgctaaac ccgttctgac tgtttatacc tacgattcct tcgccgccga ctgggggcct
    41761 ggtccaaaga tcaaaaaagc ttttgaagcc gactgtaact gcgaactgaa actggtggcg
    41821 ctggaagatg gcgtttcgct tctcaaccgt ctacggatgg aaggcaaaaa tagtaaagcc
    41881 gatgtggtgc tggggctgga taacaatctg ttagacgccg ccagtaaaac cggactattt
    41941 gccaaaagcg gtgtggcagc ggatgccgtt aacgttcccg gcggctggaa taatgacact
    42001 ttcgtcccgt ttgattacgg ctatttcgcc ttcgtctatg acaagaacaa actgaaaaac
    42061 ccgccgcaaa gcctgaaaga attggttgag agcgatcaaa actggcgggt gatttatcag
    42121 gatccgcgca ccagtacgcc ggggctgggc ctgctgttgt ggatgcaaaa agtctatggc
    42181 gatgacgccc cacaagcctg gcaaaaactg gcgaagaaaa ccgtcacggt caccaaaggc
    42241 tggagcgaag cctacggcct gtttttaaaa ggtgaaagcg atctggtact gagttacacc
    42301 acctctccgg cttatcacat tctcgaagag aaaaaagata actacgccgc cgcgaacttt
    42361 agcgaaggtc actatctgca ggtggaagtc gccgcccgca ccgctgccag caagcagccg
    42421 gagctggcgc aaaaattcct ccagtttatg gtttctccgg cttttcagaa tgcgatccca
    42481 accggtaact ggatgtatcc ggtggcaaat gtcacgctgc ctgccgggtt tgaacaattg
    42541 accaaaccgg ccaccacgct ggagttcaca ccagctgaag tggcggcaca acgtcaggca
    42601 tggattagcg gatggcaacg cgccgtcagc cgttaattcc cggctggtta attccaggtg
    42661 taagcgccgc cacgctggtg gtagcggttg cgctcgcggc gtttctcgcc ctgtggtgga
    42721 acgcgccgca gggtaactgg gtggcagtct ggcaggacag ctacctgtgg catgtggtgc
    42781 gcttctcctt ctggcaggcg tttctctcgg cgctactctc tgtcgtaccc gcgatattcc
    42841 tcgcccgcgc cctctatcgc aggcgctttc cgggtcggct ggcgctgttg cgtctgtgcg
    42901 caatgacctt gatcctcccg gtgctggttg ctgttttcgg cattcttagc gtctatggtc
    42961 gccagggctg gctggcatcg ctctgccaat cgctcggtct ggagtggacc ttttcgccct
    43021 acggcctgca aggtattttg ctggcgcacg tattttttaa tctgccgatg gcgagccgct
    43081 tattactcca ggcactggaa aacattcccg acgaacaacg tcagcttgcc gcccagcttg
    43141 ggatgcgcgg ctggcatttt ttccgcttcg tcgaatggcc gtggttacgg cgacaaatcc
    43201 cgccggttgc tgcacttatc tttatgctct gtttcgccag cttcgccacc gtgctatcac
    43261 tgggcggcgg tccgcaggcg accactatcg agctggctat ttatcaggcg ctgagttacg
    43321 actacgatcc tgcccgcgcg gcgatgctgg cgctgatcca gatggtgtgt tgccttgggc
    43381 tggtactgtt gagtcagcga ttgagtaagg ccattgcgcc aggcaccacg ctgctgcaag
    43441 gctggcgcga cccggacgat cgtctgcata gccgcatttg cgacacggtg ttaatagtgc
    43501 tggcgctgct gctgttgttg ccaccgttgc tggcggtgat cgtcgatggg gtaaatcgcc
    43561 agttgccgga agtgctggca caaccggtgc tgtggcaggc gctgtggacc tcgttgcgta
    43621 ttgcgctggc ggcaggtgta ttgtgcgtag tgctgaccat gatgctgcta tggagcagtc
    43681 gcgaacttcg ggcgcggcag aaaatgctgg cgggtcaggc gctggagatg agcggcatgt
    43741 tgattctcgc catgccgggg attgtgctgg ctaccggctt ctttttactg ctcaacaaca
    43801 ctatcggcct gcaacaatct gctgacggca ttgtgatttt caccaatgcg ttaatggcga
    43861 tcccttatgc gctgaaagta ctggaaaacc cgatgcgcga tatcaccgcc cgctacagta
    43921 tgttgtgtca gtcgctgggc attgaaggct ggtcgcgctt aaaagtggtg gagctgcgcg
    43981 ccctgaaacg tccactggcg caggcgctgg cctttgcctg cgtgctgtcg attggtgatt
    44041 ttggcgtggt ggcgttgttc ggtaacgatg atttccgtac cctgccgttt tatctctacc
    44101 agcaaattgg ctcctatcgc agccaggacg gcgcggtcac cgcgttaatt ctgctgctac
    44161 tctgttttct gctgtttacc gtgattgaaa aactaccggg gcgaaatgtt aaaactgact
    44221 gatatcacct ggctttacca acatttgccg atgcgtttta gcttaacggt ggaacgcggc
    44281 gagcaggtgg cgatcctcgg gccaagcggc gcaggtaaaa gtaccctgct gaatttgatt
    44341 gccggttttc tgacgccagc cagcggttcg ctgactatcg atggcgttga tcacaccacg
    44401 acgccgccgt cacgccgtcc ggtgtcgatg ctgtttcagg agaacaacct gttcagccac
    44461 ctgacggtcg cgcagaacat cgggctgggg cttaatccag gattgaagct gaacgcggca
    44521 cagcaggaga aaatgcacgc tatcgcccgt cagatgggga ttgataattt aatggcgcgg
    44581 ttaccgggcg agctttccgg cggccagcga cagcgcgtgg cgttagcgcg ttgtctggtg
    44641 cgcgaacagc cgattttatt gctcgatgaa ccgttctctg cgctcgatcc ggcgttacgt
    44701 caggagatgc tgacgctggt gagcacgagc tgccagcagc aaaaaatgac gctattgatg
    44761 gtgtcgcaca gtgtggaaga tgcggcgcgg atcgccacac gctcggtggt ggtcgccgac
    44821 gggcgcatcg cctggcaggg taagactgaa gaattgttga gcggtaaggc gagtgcttcg
    44881 gcaatattgg ggattacggg ttagtatgca ctgtcagatg cggcgtgaac accttatccg
    44941 acctacggac agtgcgtttt gtaggcctga taagacgcgg tcagcgtcgc atcaggcaac
    45001 ccgcacaaga caatccccta aaccccaacc actttacgca aaatatcgat atacaccggc
    45061 atcaacggct ggcgaattaa caccaccagc gccaccacgc cgatggcaga aatcaacggc
    45121 gtcagccaca acaaacggcc gcgcgacaaa taatgactta aacgatcggt tgctttaccg
    45181 ctgcgccata accgccagca cagccagcca ccaacccaca aaaataccgc cgtcgccagc
    45241 agcaaccatt taaactcgcc gctctgcatt ccggctggaa tatcgatcgc cgcgcccgcc
    45301 agaatcccag gcaggaagta aaacggtggc cacagcaggc agccgataat attcggcgta
    45361 atgaattttg ccaccggcag atccagcatt cccgccacca ttggcaccag cggacgcgtc
    45421 gggccaacaa agcgaccgac cagaatggtg aacatgctgt gttgatgcaa cgcatgttca
    45481 gttttatcga gtaatgcttt gtttttcttc agaaatgacc agcgatgcaa cggcttttta
    45541 aaacgccagc ccagccagaa ggagatccag tcgcccagca gacaaccgac aatccctgcc
    45601 agccaggcgt gccagaaact taactcgccg ctgccaatca gcgctcccag ccccgccatc
    45661 agcaccgtac cgggtagaat caaaccgacc agcgccagcg actccagaaa ggccaccaac
    45721 accaccgcca tcaatgaata cacggtagat tgggtaataa agtgttccag caatgcttgc
    45781 ataatgtgcc tgtcaaatgg acgaagcagg gattctgcaa accctatgct actccgtcaa
    45841 gccgtcaatt gtctgattcg ttaccaatta tgacaacttg acggctacat cattcacttt
    45901 ttcttcacaa ccggcacgga actcgctcgg gctggccccg gtgcattttt taaatacccg
    45961 cgagaaatag agttgatcgt caaaaccaac attgcgaccg acggtggcga taggcatccg
    46021 ggtggtgctc aaaagcagct tcgcctggct gatacgttgg tcctcgcgcc agcttaagac
    46081 gctaatccct aactgctggc ggaaaagatg tgacagacgc gacggcgaca agcaaacatg
    46141 ctgtgcgacg ctggcgatat caaaatcgct gtctgccagg tgatcgctga tgtactgaca
    46201 agcctcgcgt acccgattat ccatcggtgg atggagcgac tcgttaatcg cttccatgcg
    46261 ccgcagtaac aattgctcaa gcagatttat cgccagcagc tccgaatagc gcccttcccc
    46321 ttgcccggcg ttaatgattt gcccaaacag gtcgctgaaa tgcggctggt gcgcttcatc
    46381 cgggcgaaag aaacccgtat tggcaaatat tgacggccag ttaagccatt catgccagta
    46441 ggcgcgcgga cgaaagtaaa cccactggtg ataccattcg cgagcctccg gatgacgacc
    46501 gtagtgatga atctctcctg gcgggaacag caaaatatca cccggtcggc aaacaaattc
    46561 tcgtccctga tttttcacca ccccctgacc gcgaatggtg agattgagaa tataaccttt
    46621 cattcccagc ggtcggtcga taaaaaaatc gagataaccg ttggcctcaa tcggcgttaa
    46681 acccgccacc agatgggcat taaacgagta tcccggcagc aggggatcat tttgcgcttc
    46741 agccatactt ttcatactcc cgccattcag agaagaaacc aattgtccat attgcatcag
    46801 acattgccgt cactgcgtct tttactggct cttctcgcta acccaaccgg taaccccgct
    46861 tattaaaagc attctgtaac aaagcgggac caaagccatg acaaaaacgc gtaacaaaag
    46921 tgtctataat cacggcagaa aagtccacat tgattatttg cacggcgtca cactttgcta
    46981 tgccatagca tttttatcca taagattagc ggatcctacc tgacgctttt tatcgcaact
    47041 ctctactgtt tctccatacc cgtttttttg gatggagtga aacgatggcg attgcaattg
    47101 gcctcgattt tggcagtgat tctgtgcgag ctttggcggt ggactgcgcc agcggtgaag
    47161 agatcgccac cagcgtagag tggtatcccc gttggcaaaa agggcaattt tgtgatgccc
    47221 cgaataacca gttccgtcat catccgcgtg actacattga gtcaatggaa gcggcactga
    47281 aaaccgtgct tgcagagctt agcgtcgaac agcgcgcagc tgtggtcggg attggcgttg
    47341 acagtaccgg ctcgacgccc gcaccgattg atgccgacgg taacgtgctg gcgctgcgcc
    47401 cggagtttgc cgaaaaacca aacgcgatgt tcgtattgtg gaaagaccac actgcggttg
    47461 aagaagcgga agagattacc cgtttgtgcc acgcgccggg caacgttgac tactcccgct
    47521 acattggtgg tatttattcc agcgaatggt tctgggcaaa aatcctgcat gtgactcgcc
    47581 aggacagcgc cgtggcgcaa tctgccgcat cgtggattga gctgtgcgac tgggtgccag
    47641 ctctgctttc cggtaccacc cgcccgcagg atattcgtcg cggacgttgc agcgccgggc
    47701 ataaatctct gtggcacgaa agctggggcg gcttgccgcc agccagtttc tttgatgagc
    47761 tggacccgat cctcaatcgc catttgcctt ccccgctgtt cactgacacc tggactgccg
    47821 atattccggt gggcacctta tgcccggaat gggcgcagcg tctcggcctg cctgaaagcg
    47881 tggtgatttc cggcggcgcg tttgactgcc atatgggcgc agttggcgca ggcgcacagc
    47941 ctaacgcact ggtaaaagtt atcggtactt ccacctgcga cattctgatt gccgacaaac
    48001 agagcgttgg cgagcgggca gttaaaggta tttgcggtca ggttgatggc agcgtggtac
    48061 ctggatttat cggtctggaa gcaggccaat cggcgtttgg tgatatctac gcctggtttg
    48121 gtcgcgtact cggctggccg ctggaacagc ttgccgccca gcatccggaa ctgaaagcgc
    48181 aaatcaacgc cagccagaaa caactgcttc cggcgctgac cgaagcatgg gccaaaaatc
    48241 cgtctctgga tcacctgccg gtggtgctcg actggtttaa cggccgccgc acaccgaacg
    48301 ctaaccaacg cctgaaaggg gtgattaccg atcttaacct cgctaccgac gctccgctgc
    48361 tgtttggcgg tttgattgct gccaccgcct ttggcgcacg cgcaatcatg gagtgcttta
    48421 ccgatcaggg gatcgccgtc aataacgtga tggcgctggg cggcatcgcg cggaaaaacc
    48481 aggtcattat gcaggcctgc tgcgacgtgc tgaatcgccc gctgcaaatt gttgcctctg
    48541 accagtgctg tgcgctcggt gcggcgattt ttgctgccgt cgccgcgaaa gtgcacgcag
    48601 acatcccatc agcccagcaa aaaatggcca gtgcggtaga gaaaaccctg caaccgcgca
    48661 gcgaacaggc acaacgcttt gaacagcttt atcgccgcta tcagcaatgg gcgatgagcg
    48721 ccgaacaaca ctatcttcca acttccgccc cggcacaggc tgcccaggcc gttccgactc
    48781 tataaggaca cgataatgac gatttttgat aattatgaag tgtggtttgt cattggcagc
    48841 cagcatctgt atggcccgga aaccctgcgt caggtcaccc aacatgccga gcacgttgtt
    48901 aatgcgctga atacggaagc gaaactgccc tgcaaactgg tgttgaaacc gctgggcacc
    48961 acgccggatg aaatcaccgc tatttgccgc gacgcgaatt acgacgatcg ttgcgctggt
    49021 ctggtggtgt ggctgcacac cttctccccg gccaaaatgt ggatcaacgg cctgaccatg
    49081 ctcaacaaac cgttgctgca attccacacc cagtttaacg cggcgctgcc gtgggacagt
    49141 atcgatatgg actttatgaa cctgaaccag actgcacatg gcggtcgcga gttcggcttc
    49201 attggcgcgc gtatgcgtca gcaacatgcc gtggttaccg gtcactggca ggataaacaa
    49261 gcccatgagc gtatcggctc ctggatgcgt caggcggtct ctaaacagga tacccgtcat
    49321 ctgaaagtct gccgttttgg cgataacatg cgtgaagtag cggtcaccga tggtgataaa
    49381 gttgccgcac agatcaagtt cggtttctcc gtcaatacct gggcggttgg cgatctggtg
    49441 caggtggtga actccatcag cgacggcgat gttaacgcgc tggtcgatga gtacgaaagc
    49501 tgctacacca tgacgcctgc cacacaaatc cacggcgaaa aacgacagaa cgtgctagaa
    49561 gcggcgcgta ttgagctggg gatgaagcgt ttcctggaac aaggtggctt ccacgcgttc
    49621 accaccacct ttgaagattt gcacggtctg aaacagcttc caggtctggc cgtacagcgt
    49681 ctgatgcagc agggttacgg ctttgcgggc gaaggcgact ggaaaaccgc cgccctgctt
    49741 cgcatcatga aggtgatgtc aaccggtctg cagggcggca cctcctttat ggaggactac
    49801 acctatcact tcgagaaagg taatgacctg gtgctcggct cccatatgct ggaagtctgc
    49861 ccgtcgattg ccgtagaaga gaaaccgatc ctcgacgttc agcatctcgg tattggtggt
    49921 aaggacgatc ctgcccgact gatcttcaat acccaaaccg gtccagcgat tgtcgccagc
    49981 ctgattgatc tcggcgatcg ttaccgtctg ctggttaact gtatcgacac ggtgaaaaca
    50041 ccgcactccc tgctgaaact gccggtggcg aatgcgctgt ggaaagcgca accggatctg
    50101 ccaactgctt ccgaagcgtg gatcctcgct ggtggcgcgc accataccgt cttcagccat
    50161 gcgctgaacc tcaacgatat gcgtcagttc gccgagatgc acgacattga aatcacggtg
    50221 attgataacg acacccgcct gccagcgttt aaagacgcac tgcgctggaa cgaagtgtat
    50281 tacggatttc gtcgctaagt agccacatca ggtatgtaac gcctgatgcg acgctgacgc
    50341 gtcttatctg gcctacacgc tgcgattttg taggccggat aagcaaagcg catccggcat
    50401 tcaacgcctg atgcgacgct ggcgcgtctt atcaggccta cgcgctgcga ttttgtagac
    50461 cggataagcg aagcgcatcc ggcacgaagg agtcaacatg ttagaagatc tcaaacgcca
    50521 ggtattagaa gccaacctgg cgctgccaaa acacaacctg gtcacgctca catggggcaa
    50581 cgtcagcgcc gttgatcgcg agcgcggcgt ctttgtgatc aaaccttccg gcgtcgatta
    50641 cagcgtcatg accgctgacg atatggtcgt ggttagcatc gaaaccggtg aagtggttga
    50701 aggtacgaaa aagccctcct ccgacacgcc aactcaccgg ctgctctatc aggcattccc
    50761 ctccattggc ggcattgtgc atacgcactc gcgccacgcc accatctggg cgcagtcggg
    50821 tcagtcgatt ccagcaaccg gcaccaccca cgctgactat ttctacggca ccattccctg
    50881 cacccgcaaa atgaccgacg cagaaatcaa cggcgaatat gagtgggaaa ccggtaacgt
    50941 catcgtagaa acctttgaaa aacagggtat cgatgcagcg caaatgcccg gcgttctggt
    51001 ccattcccac ggcccgtttg catggggcaa aaatgccgaa gatgcggtgc ataacgccat
    51061 cgtgctggaa gaggtcgctt atatggagat attctgccgt cagttagcgc cgcagttacc
    51121 ggatatgcag caaacgctgc tggataaaca ctatctgcgt aagcatggcg cgaaggcata
    51181 ttacgggcag taatgactgt ataaaaccac agccaatcaa acgaaaccag gctatactca
    51241 agcctggttt tttgatggat tttcagcgtg gcgcaggcag gttttatctt aacccgacac
    51301 tggcgggaca ccccgcaagg gacagaagtc tccttctggc tggcgacgga caacgggccg
    51361 ttgcaggtta cgcttgcacc gcaagagtcc gtggcgttta ttcccgccga tcaggttccc
    51421 cgcgctcagc atattttgca gggtgaacaa ggctttcgcc tgacaccgct ggcgttaaag
    51481 gattttcacc gccagccggt gtatggcctt tactgtcgcg cccatcgcca attgatgaat
    51541 tacgaaaagc gcctgcgtga aggtggcgtt accgtctacg aggccgatgt gcgcccgcca
    51601 gaacgctatc tgatggagcg gtttatcacc tcaccggtgt gggtcgaggg tgatatgcac
    51661 aatggcacta tcgttaatgc ccgtctgaaa ccgcatcccg actatcgtcc gccgctcaag
    51721 tgggtttcta tagatattga aaccacccgc cacggtgagc tgtactgcat cggcctggaa
    51781 ggctgcgggc agcgcatcgt ttatatgctg gggccggaga atggcgacgc ctcctcgctt
    51841 gatttcgaac tggaatacgt cgccagccgc ccgcagttgc tggaaaaact caacgcctgg
    51901 tttgccaact acgatcctga tgtgatcatc ggttggaacg tggtgcagtt cgatctgcga
    51961 atgctgcaaa aacatgccga gcgttaccgt cttccgctgc gtcttgggcg cgataatagc
    52021 gagctggagt ggcgcgagca cggctttaaa aacggcgtct tttttgccca ggctaaaggt
    52081 cggctaatta tcgacggtat cgaggcgctg aaatccgcgt tctggaattt ctcttcattc
    52141 tcgctggaaa ctgtcgctca ggagctatta ggcgaaggaa aatctatcga taacccgtgg
    52201 gatcgaatgg acgaaattga ccgccgtttc gccgaagata aacctgcgct ggcaacttat
    52261 aacctgaaag attgcgagct ggtgacgcag atcttccaca aaactgaaat catgccattt
    52321 ttactcgaac gggcaacggt gaacggcctg ccggtggacc gacacggcgg ttcggtggcg
    52381 gcatttggtc atctctattt tccgcgaatg catcgcgctg gttatgtcgc gcctaatctc
    52441 ggcgaagtgc cgccgcacgc cagccctggc ggctacgtga tggattcacg gccagggctt
    52501 tatgattcag tgctggtgct ggactataaa agcctgtacc cgtcgatcat ccgcaccttt
    52561 ctgattgatc ccgtcgggct ggtggaaggc atggcgcagc ctgatccaga gcacagtacc
    52621 gaaggttttc tcgatgcctg gttctcgcga gaaaaacatt gcctgccgga gattgtgact
    52681 aacatctggc acgggcgcga tgaagccaaa cgccagggta acaaaccgct gtcgcaggcg
    52741 ctgaaaatca tcatgaatgc cttttatggc gtgctcggca ccaccgcctg ccgcttcttc
    52801 gatccgcggc tggcatcgtc gatcaccatg cgtggtcatc agatcatgcg gcaaaccaaa
    52861 gcgttgattg aagcacaggg ctacgacgtt atctacggcg ataccgactc aacgtttgtc
    52921 tggctgaaag gcgcacattc ggaagaagaa gcggcgaaaa tcggtcgtgc actggtgcag
    52981 cacgttaacg cctggtgggc ggaaacgctg caaaaacaac ggctgaccag cgcattagaa
    53041 ctggagtatg aaacccattt ctgccgtttt ctgataccaa ccattcgcgg agccgataca
    53101 ggcagtaaaa agcgctacgc cgggctgatt caggagggcg ataaacagcg gatggtgttt
    53161 aaagggctgg aaaccgtgcg caccgactgg acgccgctgg cccagcagtt tcagcaggag
    53221 ctatacctgc gcatcttccg caacgagcca tatcaggaat atgtacgcga aaccatcgac
    53281 aaactgatgg cgggtgaact ggatgcgcga ctggtttacc gtaaacgcct tcgccgtccg
    53341 ctgagcgagt atcagcgtaa tgtgccgcct catgtacgcg ccgctcgcct tgccgatgaa
    53401 gaaaaccaaa agcgtggtcg ccccttgcaa tatcagaatc gcggcaccat taagtacgta
    53461 tggaccacca acggcccgga gccgctggac taccaacgtt caccactgga ttacgaacac
    53521 tatctgaccc gccagctaca acccgtggcg gagggaatac tcccttttat tgaggataat
    53581 tttgctacac ttatgaccgg gcaacttggg ctattttgag caaaaaaaga gttcgccaga
    53641 taccattttg atgcgtgacg aatgctttgc catccagtac catagcgccc tttccattcc
    53701 tggacctgaa taacaccact acctcataag cacggtagcg ggtggttatt gcctgcaatt
    53761 aaagatatag agccgaacac atatgccttt tacacttggt caacgctgga tcagcgatac
    53821 agaaagcgaa ttgggacttg gaaccgttgt cgcggtggat gcgcgaactg tcactttact
    53881 tttcccatct actggtgaaa accgtctgta cgcacgcagt gattcccccg tgacccgcgt
    53941 gatgttcaac cctggtgata ccattaccag ccatgacggc tggcagatgc aagtcgaaga
    54001 agtaaaagaa gaaaatggct tgctgaccta tatcggtact cgcctggata ctgaagagtc
    54061 cggcgtagcc ctgcgtgaag ttttccttga tagcaaactg gtgttcagca aaccgcagga
    54121 ccgcctgttt gccgggcaga ttgaccgtat ggaccgcttt gcgctgcgtt atcgcgcgcg
    54181 taagtattcc agcgaacagt tccgtatgcc gtacagcggc ctgcgcggtc agcgtaccag
    54241 cctgatcccg caccagctca acatcgctca tgatgttggc cgccgccacg cgccgcgcgt
    54301 cctgctggct gacgaagtgg gtttagggaa aaccattgaa gccgggatga tcctgcatca
    54361 gcaactgctc tctggcgctg ctgaacgtgt gctgattatc gtcccggaaa ccttacagca
    54421 tcagtggctg gtagaaatgc tgcgccgttt caacctgcgc tttgctctgt ttgatgatga
    54481 gcgttatgcc gaagctcagc acgatgctta caacccgttt gacaccgaac agctggtgat
    54541 ttgctcgctg gattttgccc gtcgtagcaa acagcgcctg gaacatctct gtgaagccga
    54601 atgggacctg ctggtggtcg atgaagcgca tcacctggtg tggagcgaag atgcgccaag
    54661 ccgtgaatat caggccattg aacaactggc agagcacgtg ccgggcgttc tgctgctgac
    54721 cgcgaccccg gaacagctgg ggatggaaag ccacttcgcc cgtctgcgtc tgctggaccc
    54781 gaaccgtttc cacgattttg cgcagttcgt tgaagagcag aaaaattatc gtccggttgc
    54841 ggacgccgtt gccatgctgc tggcaggtaa caaactgagc aatgacgaac tgaacatgct
    54901 cggcgagatg atcggcgagc aggatatcga gccgctgttg caggcagcaa acagcgacag
    54961 cgaagatgcc cagagcgccc gtcaggagct ggtttcgatg ctgatggatc gccacggcac
    55021 cagccgcgtg ctgttccgta acacgcgtaa cggtgtgaaa ggattcccga aacgcgagct
    55081 gcacaccatt aagctgccgc taccgacgca gtatcagacg gctattaaag tctccggcat
    55141 tatgggcgca cgtaaaagtg cggaagatcg tgctcgcgat atgctctacc cggagcgtat
    55201 ttatcaggaa tttgaaggtg ataacgccac ctggtggaac ttcgatccgc gcgttgagtg
    55261 gctgatgggc tacctgacca gccatcgctc tcagaaagtg ctggtgatct gcgccaaagc
    55321 tgccactgcg ctgcaactgg agcaggtact gcgcgaacgt gaaggtattc gcgctgcggt
    55381 gttccacgaa ggtatgtcga ttatcgaacg tgaccgcgct gccgcctggt ttgccgaaga
    55441 agacaccggc gcacaggtac tgctgtgctc agaaatcggt tctgaaggac gtaacttcca
    55501 gttcgccagc cacatggtga tgtttgacct gccattcaac ccggatctac tggagcagcg
    55561 tattggtcgt ctggatcgta tcggccaggc gcacgatatt cagatccatg tgccttatct
    55621 ggagaaaacc gctcagtcgg tgctggtgcg ctggtatcac gaaggtctgg atgcatttga
    55681 gcacacctgc ccgaccggac gcactattta cgatagcgta tacaacgatc tgattaacta
    55741 tctggcttca ccggatcaaa ccgaaggctt tgacgatctg atcaaaaact gccgcgagca
    55801 acatgaagcg ctgaaagcac agctggaaca gggtcgtgac cgcctgctgg aaatccactc
    55861 caacggtggc gaaaaagccc aggcactggc agaaagcatt gaagagcagg atgacgatac
    55921 caacctgatc gccttcgcca tgaacctgct cgatattatc ggtatcaatc aggacgatcg
    55981 cggcgacaac atgatcgtgc tgacgccgtc cgatcatatg ctggtgccgg acttccctgg
    56041 cctgtcggaa gatggcatca ccatcacctt tgatcgtgaa gtggcgctgg cgcgtgaaga
    56101 tgcacagttt attacctggg agcatccgct gatccgcaac ggtctggatc tgatcctttc
    56161 tggcgatacc ggtagcagca cgatttcact gttaaaaaac aaagcgttgc cggtaggtac
    56221 gctgttggtg gaactgattt atgtggttga agcccaggct ccgaagcagt tgcagctcaa
    56281 ccgcttcctg ccaccgacgc cggtacgtat gctgctggat aaaaacggca acaacctggc
    56341 ggcgcaggta gagtttgaaa cctttaaccg ccagcttaac gcggttaacc gtcacaccgg
    56401 cagcaaactg gttaacgccg tgcagcagga tgttcacgct atccttcaac tgggtgaagc
    56461 gcagatcgag aaatctgccc gtgcattgat tgatgcagcg cgtaacgaag ccgacgaaaa
    56521 actgtctgcc gagctgtctc gtctggaagc tctgcgtgca gtgaacccga acattcgtga
    56581 cgacgaactg accgccattg agagcaaccg tcagcaggta atggaaagcc tggatcaggc
    56641 aggttggcgt ctggatgccc tgcgtttgat cgttgtaacg catcagtaac ggagccgaaa
    56701 atggggatgg aaaactacaa tccaccgcag gaaccctggt tggttatcct gtatcaggat
    56761 gaccacatta tggtggttaa caagccgagc ggtttgttgt ctgtgccggg gcgtctggaa
    56821 gagcacaaag acagcgtgat gacgcgcatt cagcgtgatt atccgcaggc agaatcggtg
    56881 catcgtctgg atatggctac cagcggcgtg attgtagtgg cgctgaccaa agccgcggag
    56941 cgggagttaa aacgccagtt ccgcgagcgc gagccgaaaa agcagtatgt ggcccgcgtc
    57001 tgggggcatc catcccctgc ggaaggtctg gtggatctgc cgctgatttg cgactggcca
    57061 aaccgcccga aacagaaagt ctgttacgaa acgggtaaac ctgcgcagac ggaatatgaa
    57121 gtggtggagt atgcggcgga taacacggca agagtggtgt taaaaccgat tactgggcgt
    57181 tcgcatcaat tgcgtgtgca tatgctggcg ctggggcatc cgattctcgg cgatcgtttt
    57241 tatgcatcac cagaagcgag agcgatggca ccgcgtttgt tgctacatgc agagatgttg
    57301 acgattaccc atccggcgta tggcaatagt atgacgttta aagcgccagc ggatttttaa
    57361 tagtcacgct ggcgcagttc ggtaggcgga taaggcgttc acgccgaatc cggcaattgt
    57421 gcgccgattg cctgatgcga cgcgggccgc gtcttatcag gcctacagtt taaaacttat
    57481 ttaaaccctt tctgctgctt tatcagctca tatgcctgct gaatttcctg cgctttctgc
    57541 ttcgccatct ccatcatctc aggcggcaaa cctttcgcca ccagcttatc gggatggtgt
    57601 tcattcatca gcttacggta ggctcgttta atggtggtcg catcatccgt cggcttcaca
    57661 cccagcacat tacaggcatc ttccagcgtc gggccacgct gcgcttgctg ccagttacca
    57721 ccgccagatt gctgctgata accgccgcca aactgtgcac cgccctgcat catgcgcaaa
    57781 aactggtcaa actgggcgcg ggagatccct aattcttctg caatgacata cagcaccgac
    57841 cgttcattcg ggtgcagtga accatcagca aacgccgcct gaatctggat ctccagaaac
    57901 atacgaatta agtcaaaacg accaaagcag acactgcgaa actggcgcat cttttcgcgc
    57961 agcgggtaat tgtctgattt tcccacccgg aacgcgtttt gcgccgcagt acgggaagcg
    58021 ccatgaaggt tcattaggtc catcagctgg ctggcgatat gaatatcagc ctccgtgacg
    58081 cgacctttgg atttggttaa atgccccatc acttcaaaag tggtggcaaa aaacagcgcc
    58141 tgacgctcac gctggttggc gaaccacgcc attttacggc tacgggcttt atcaaacata
    58201 tggccaatta acaggcctaa cactacgccc caaaagccgc cgcccatcag taaggccacg
    58261 gccacgccaa tgatttttcc ccaatactgc atatattccc caaatcgaca cacggatatc
    58321 agggctatct cccacaatat aaaggtgctt ttaccgtttt ccggctgcag tcaattgtgg
    58381 gacatcgcct ataatttgca ttatcatacc tgtcattcaa tgccgtgcct aacaccactg
    58441 acgctattcg gacaggatta acactagcgt agagatgacg agtacgttag tctctgaccg
    58501 tttgtcacgc gcaacgttac cgatgatgga acaataaaat caacgtatga aaaaacgtat
    58561 ccccactctc ctggccacca tgattgccac cgccctttat agtcaacagg gactggcagc
    58621 cgacctcgcc tcacagtgca tgttgggcgt gccaagctat gaccgtcctc tggtacaggg
    58681 cgataccaat gacttacccg tgactatcaa tgctgaccac gcgaaagggg actacccgga
    58741 tgacgccgtg tttactggca gcgtggatat catgcagggt aacagccgtc tgcaggccga
    58801 cgaagtgccg ctccatcaaa aagaggcacc aggacaaccg gagccggtac gaaccgttga
    58861 tgcgctcggt aatgtccatt acgacgataa ccaggtgatc ctcaaagggc cgaaaggctg
    58921 ggcgaatctg aacaccaaag ataccaacgt ctgggaaggt gattaccaga tggtgggtcg
    58981 ccagggccgc ggtaaagcgg acctgatgaa acaacgtggt gaaaaccgct ataccattct
    59041 ggataacggt agctttacct cctgtctgcc gggttctgac acctggagcg tggtaggtag
    59101 cgaaattatt catgaccgcg aagaacaagt tgcggagatc tggaacgccc gctttaaggt
    59161 gggtccagta ccgatctttt atagccccta tttgcagttg ccggtgggtg acaaacgtcg
    59221 ctctggtttc ttgatcccga acgccaagta caccaccacc aactactttg agttctacct
    59281 gccatattac tggaacatcg cgccaaatat ggatgccacc atcacgccgc attatatgca
    59341 tcgtcgtggc aacatcatgt gggagaacga attccgctac ctctcccagg cgggcgctgg
    59401 cttgatggaa ctggactatc tgccttcaga taaagtctat gaagatgaac acccgaacga
    59461 tgacagttca cgtcgttggt tgttctactg gcaacactcc ggggtcatgg atcaagtgtg
    59521 gcgtttcaac gtcgactaca ccaaggtcag cgatcctagc tacttcaatg atttcgataa
    59581 caagtacggt tccagtactg acggctacgc aacgcaaaaa ttcagcgttg gctatgcggt
    59641 gcaaaacttc aatgccaccg tttcaaccaa gcagttccag gtctttagcg agcagaacac
    59701 cagtagctac tcggcagagc cgcagttaga cgttaactac taccagaatg atgttggtcc
    59761 gtttgatacg cgtatttacg gccaggcagt gcactttgtt aacaccagag acgacatgcc
    59821 tgaagcaacc cgtgttcacc tggaaccgac catcaatttg ccgctctcta ataactgggg
    59881 cagcatcaat accgaagcga agttgctggc aacccattat cagcaaacca atcttgactg
    59941 gtataactcc agaaacacga ccaagctgga cgaatccgtt aaccgcgtta tgccgcaatt
    60001 caaagttgac ggcaaaatgg tctttgaacg cgatatggaa atgctggctc cgggttatac
    60061 ccaaacgctg gaaccgcgcg cgcagtattt gtacgtgccg tatcgcgatc agagcgacat
    60121 ctataactac gactcgtctc tactgcaatc tgactactct ggcctgttcc gggaccggac
    60181 ttacggcggt cttgaccgta ttgcctccgc taaccaggtg acgaccggtg tcacatctcg
    60241 catatatgat gatgctgccg ttgaacattt taatatttcc gttggtcaaa tctactattt
    60301 cacggagtct cgcactggcg atgacaacat aacatgggag aatgacgaca aaacgggctc
    60361 actggtgtgg gcaggcgata cttactggcg tatctccgag cgttggggat tgcgtggcgg
    60421 gattcagtac gatacacgtc tggataacgt agcgaccagt aactccagca ttgaataccg
    60481 tcgggatgaa gaccgtctgg tacagctgaa ttaccgttac gccagcccgg aatatattca
    60541 ggctacgctg cctaagtact attccactgc tgagcaatat aagaatggta tttcgcaggt
    60601 aggtgctgtc gccagctggc caattgccga tcgttggtcc attgttgggg cctactacta
    60661 cgacaccaat gcgaacaagc aagccgactc tatgttaggt gtgcaataca gctcctgctg
    60721 ctatgcaatt cgcgtcggtt acgagcggaa gctgaacggt tgggataacg ataaacaaca
    60781 tgcggtatat gacaacgcaa tcggctttaa catcgaactt cgcggcctga gctccaacta
    60841 cggtctggat acgcaagaga tgctgcgttc gaacattctg ccgtatcaaa acactttgtg
    60901 atttgttgat ttaccacgta atccgcagtg cggttaattg aaatggaaaa agtatgaaga
    60961 actggaaaac gctgcttctc ggtatcgcca tgatcgcgaa taccagtttc gctgcccccc
    61021 aggtagtcga taaagtcgca gccgtcgtca ataacggcgt cgtgctggaa agcgacgttg
    61081 atggattaat gcagtcggta aaactgaacg ctgcgcaggc aaggcagcag cttcctgatg
    61141 acgcgacgct gcgccaccaa atcatggaac gtttgatcat ggatcaaatc atcctgcaga
    61201 tggggcagaa aatgggagtg aaaatctccg atgagcagct ggatcaggcg attgctaaca
    61261 tcgcgaaaca gaacaacatg acgctggatc agatgcgcag ccgtctggct tacgatggtc
    61321 tgaactacaa cacctatcgt aaccagatcc gcaaagagat gattatctct gaagtgcgta
    61381 acaacgaggt gcgtcgtcgc atcaccatcc tgccgcagga agtcgaatcc ctggcgcagc
    61441 aggtgggtaa ccaaaacgac gccagcactg agctgaacct gagccacatc ctgatcccgc
    61501 tgccggaaaa cccgacttct gatcaggtga acgaagcgga aagccaggcg cgcgccattg
    61561 tcgatcaggt gcgtaacggc gctgatttcg gtaagctggc gattgctcat tctgccgacc
    61621 agcaggcgct gaacggcggc cagatgggct ggggccgtat tcaggagttg ccgggtatct
    61681 tcgcccaggc attaagcacc gcgaagaaag gcgacattgt tggcccgatt cgttccggcg
    61741 ttggcttcca tattctgaaa gttaacgacc tgcgcggcga aagcaaaaat atctcggtga
    61801 ccgaagttca tgctcgccat attctgctga aaccgtcgcc gatcatgact gacgaacagg
    61861 cccgtgtgaa actggaacag attgctgccg atatcaagag tggtaaaacg acttttgctg
    61921 ccgcagcgaa agagttctct caggatccag actctgctaa ccagggcggt gatctcggct
    61981 gggctacacc agatattttc gatccggcct tccgtgacgc cctgacccgc ctgaacaaag
    62041 gtcaaatgag tgcaccggtt cactcttcat tcggctggca tttaatcgaa ctgctggata
    62101 cccgtaatgt cgataaaacc gacgctgcgc agaaggatcg tgcataccgc atgctgatga
    62161 accgtaagtt ctcggaagaa gcagcaagct ggatgcagga acaacgcgcc agcgcctacg
    62221 ttaaaatcct gagcaactaa tggttaaaac ccaacgtgtt gtgatcactc ccggcgagcc
    62281 cgccgggatt ggcccggact tagttgtcca gcttgcacag cgtgagtggc cggtcgaact
    62341 ggttgtttgt gccgatgcca ctctccttac cgaccgggca gcgatgctcg gtttgccgct
    62401 caccctccgc ccttattccc ccaactcccc tgcacaaccg caaactgcgg gcacattaac
    62461 gctacttcct gtcgcgctac gcgaatctgt cactgcgggg cagttagcga ttgaaaatgg
    62521 gcattacgtg gtggagacgc tggcgcgagc gtgtgatggc tgtctgaacg gtgaatttgc
    62581 tgcgctgatc acaggccccg tgcataaagg cgtcattaac gacgcaggta ttccgtttac
    62641 tggtcatacc gagtttttcg aagagcgctc gcaggcgaaa aaagtggtga tgatgctggc
    62701 gaccgaagaa cttcgcgtgg cgctggcaac gacgcattta ccgctgcgcg atatcgcaga
    62761 tgctatcacc cctgcacttt tgcacgaagt gattgctatt ttgcatcacg atttgcgtac
    62821 aaaatttggt attgccgaac cgcgcattct ggtctgcggg ctgaatccgc acgcgggcga
    62881 aggcggtcat atgggtacgg aagagataga caccattatt ccggtgctcg acgagctgcg
    62941 ggcgcagggg atgaaactca acgggccgct gcctgccgat accctgtttc agccgaaata
    63001 tctcgataac gccgacgccg tgctggcgat gtaccacgat cagggtcttc ccgtgctaaa
    63061 ataccagggc ttcgggcgcg gtgtgaacat tacgctgggc ctgcccttta ttcgcacatc
    63121 agtggaccac ggcaccgcgc ttgaactggc gggacgtggc gaagccgatg tcggcagttt
    63181 tattacggcg cttaatctcg ccatcaaaat gattgttaac acccaatgaa taatcgagtc
    63241 caccagggcc acttagcccg taaacgcttc gggcaaaact ttctcaacga tcagttcgtg
    63301 atcgacagca ttgtttctgc cattaacccg caaaagggcc aggcaatggt cgaaatcggc
    63361 cccggtctgg cggcattgac cgagccggtc ggcgaacgtc tggaccagct gacggtcatc
    63421 gaacttgacc gcgatctggc ggcacgtctg caaacgcatc cattcttagg cccgaaactg
    63481 acgatttatc agcaggatgc gatgaccttt aactttggcg aactggccga gaaaatgggt
    63541 cagccgctgc gtgttttcgg caacctgcct tataacatct ccacgccgtt gatgttccat
    63601 ctgtttagct atactgatgc cattgccgac atgcacttta tgttgcaaaa agaggtggtg
    63661 aatcgtctgg ttgcaggacc gaacagcaaa gcgtatggtc gattaagcgt catggcgcaa
    63721 tactattgca acgtgatccc ggtactggaa gttccgccgt cagcctttac accaccaccc
    63781 aaagtggatt ccgccgtcgt gcgcctggtt cctcatgcaa cgatgcctca cccggttaaa
    63841 gatgttcgtg tgttgagccg catcaccacc gaagccttta accagcgtcg taaaaccatt
    63901 cgtaacagcc tcggcaacct gtttagcgtc gaggtgttaa cgggaatggg gctcgacccg
    63961 gcgatgcgag cggaaaatat ctctgtcgcg caatattgcc agatggcgaa ctatctggcg
    64021 gagaacgcgc ctttgcagga gagttaacga tgatcaattc gccccgagtg tgtattcagg
    64081 ttcaaagcgt ctacattgag gcacaatctt cacctgataa tgaacgttac gtttttgctt
    64141 ataccgtaac catacgcaat ctggggcgag cgccagtgca gttgttgggg cgttactggc
    64201 tgatcaccaa tggcaatggc cgtgaaaccg aagtccaggg cgaaggagtg gttggcgtcc
    64261 agccacttat cgcgcctggc gaagagtacc agtacaccag cggtgcaatc attgaaaccc
    64321 cgctgggcac catgcagggt cactacgaaa tgatcgatga aaatggcgtc cctttcagca
    64381 tcgacattcc cgtattccga ctcgccgttc ccacactcat tcattaaaag aatatggcga
    64441 cataccttat tggcgacgtt catggttgtt acgatgaact gatcgcattg ctgcataaag
    64501 tagaatttac ccctgggaaa gataccctct ggctgacggg cgatctggtc gcgcgcggcc
    64561 cgggttcgct ggatgttctg cgctatgtga aatccttagg cgacagcgta cgtctggtgc
    64621 tgggcaatca cgatctgcat ctgctggcgg tatttgccgg gatcagccgc aataaaccga
    64681 aagatcgcct gacaccgctg ctggaagcgc cggatgccga cgagctgctt aactggctgc
    64741 gtcgccagcc tttgctgcaa atcgacgaag agaaaaagtt ggtgatggcc cacgcaggga
    64801 tcacgccgca gtgggatcta cagaccgcca aagagtgcgc gcgcgatgta gaagcggtgc
    64861 tatcgagtga ctcctatccc ttctttctcg acgctatgta cggcgatatg ccaaataact
    64921 ggtcaccgga attgcggggg ctgggaagac tgcgttttat caccaacgcc tttacccgta
    64981 tgcgtttttg cttcccgaac ggtcaactgg atatgtacag caaagaatcg ccggaagagg
    65041 cccctgcccc actgaaaccg tggtttgcga ttcctggccc tgtcgctgaa gaatacagca
    65101 tcgcctttgg tcattgggca tcgctggagg gcaaaggtac gccggaaggt atatacgcgc
    65161 tggataccgg ctgctgctgg ggtggtacat taacctgcct gcgctgggaa gataaacagt
    65221 attttgtcca gccgtcgaac cggcataagg atttgggcga agcggcggcg tcttaaacac
    65281 agcctgatat aggaaggccg gataagacgc gaccggcgtc gcatccggca ctagccgtaa
    65341 attctataca aaattaccgc cgctccagaa tctcaaagca atagctgtga gagttctgcg
    65401 catcagcatc gtggaattcg ctgaataccg attcccagtc atccggctcg taatccggga
    65461 aatgggtgtc gccttccact tctgcgtcga tatgcgtcag atacagtttc tgcgcttttg
    65521 gcaggaactg ctcataaacg cgaccgccgc caatcaccat gatttctggt acgtcaccac
    65581 acgccgcgat ggcttcatcc accgacttca cccacgttac gcgatcgtcc gtacccggtt
    65641 gactgctgag gataatattt ttgcgtcctg gcaacggacg accgattgat tcccaggtat
    65701 ggcggcccat aatcacgggt ttatttaagg tgttgcgttt aaaccaggcg agatcggcag
    65761 gcaggttcca cggcatggcg ttttccatgc cgataacgcg atctaccgct aacgccgcaa
    65821 tcagactgat cattgagatt tcccgataaa aaaaattgtc gccactatac gtaaagcgta
    65881 aaccgtcgtc gactggtgcg aggatgatgt tgaggaaaat tttatattct gctggcgagt
    65941 ccacgctctc tccctggact cgccgcatta caatgaaaca aaaacaaaca gttagctgta
    66001 aagtgtgatt tacgtcactc tttattagga tgagggtttc gtttccggtt catccgccat
    66061 gttgccggta tgtttacctt cttcggttcc ctgccagcca tgtcgttgaa ttaatgacag
    66121 atgttcgcgg tcctcggtaa tgatctcact taacatcgcg ctggtgcgtt tatagaccgc
    66181 cgcgcgggct ttggtgtcgt tctcaaccat tgccatctct tccaccatct gaatattaaa
    66241 gcggcggaac acatcggcac gttctcgcgc ttcatacggc cccagaccta aactttccag
    66301 tgccagacgc ccggttttca gcgcaccttc gaaggtttca cgctccggct tttcaacgcc
    66361 tgcctgacgc aaacgaatgt agtggtcgac atcgcgggcg cgggcaataa tctgcaaatg
    66421 cgggaagtgt tctttcacca tctctgtcag ttgcaggttg gtttgcggat cgtcgatggc
    66481 gttaatcagc acttccgctt tcgccgctcc cgcagattcc agtaaatcca tccgcgtggc
    66541 atcgccataa aacactttca taccaaattt acgcaaggtt tcgatatggt ccggatcgtg
    66601 atcgagcacc accattttca ccccgctgga gagcagtaaa cgtccggtga tctgcccaaa
    66661 acgaccgaat ccggcaatga ttacccgcgg ctgttcttcg tcgatctcat cggcttcacg
    66721 cgcctcttca gtagaagatt gctcaaggcg attgaggatc accagcagaa tcggcgttgc
    66781 cgccatcgac agcgccaccg ccagggtcag cgatttcgcc cactccggct ccagcacatt
    66841 cgccatctgc gccgcgccaa ataccacaaa ggcaaactca ctgccctgcc ctaacaacac
    66901 cgcaaaccaa cgacgctgtt tatttggcac ttgcaacggt cgggcaatca gccacagcat
    66961 ggcgattttg atgatgagga aaccgagcag caaaatgaca atgcgcaatg ggttttcaag
    67021 cagcgtgcca aagtctatcg acatgccaac accgatgaaa aacagcccca acagcaaacc
    67081 tttaaagggt tcgatatcgc tctccagcgc atgacggtat tccgagcttg ccagcagtac
    67141 gcccgccaga aatgcgccca tcgccatcga caagccgacc tcttccagca gcaaaccaaa
    67201 gccaaacacg aggaataacg ccacggcact aaacacttcc cgcaagccag agcgggctac
    67261 aaaacgcagc gccggacgcg tgacatagcg ccccagcaat accaccagca ccagcgcacc
    67321 cgccactttt aacgccgaga gagcaaatgc gcccatcgtc gtcgaggcac tgctcgttgc
    67381 cagtagcgga atcatcgcca ccagcgggat cgccgcgata tcctggaaca gcagcaccgc
    67441 aaaggcactg cgacccattt gcgtcaccat cagattgcgt tcattcatcg cctgcatggc
    67501 aatcgccgta gaggagagcg ccagcgtcat gccgatcaat tccgcgacct gccagcgcag
    67561 cccaagtaac atgcagaaca gccccagcag gccgccgcaa atcaccatct gcaatgcgcc
    67621 accgccgaac actgccgcac gcagcttcca cagcctttgt ggatcgagtt cgaggccgat
    67681 aataaacagc atcagcacca ccccaatctc ggcaaagtgc agaatagatt cggcatcggt
    67741 caccagtcgc agcccccacg ggccaataat gcagccggcg atcaggtagc caagtaccga
    67801 tcccagacca agacgtaccg caatgggtac aatcagcgct gccgaaccga gataaatcag
    67861 cgcctgaatc agcgtatggc tatccatgat gggcctcctg ccattccagc agacgttgct
    67921 tatagtgacg cgcctgccct tcgagggttt cgtcgtcaca aataaaggtg cagtgcatgg
    67981 caaacggtgg cagccagttc agcccgcagt agattgccgt cgcctgtagc ggctgcgaca
    68041 gcacatcaaa gcccggatgc gcaccaattt caaaatggct ttccccgccg ccggtcgtca
    68101 ccgcccacag caaatgtttg ccatgcagcg ccttgccgcc gtgaccgtaa gcccagccgt
    68161 gcgacaaaac tttatcgatc caaagtttaa gaagcggagg aatgctgtac cactgcatcg
    68221 gatgctgcca gacgatcaga tcggcgcgag acagcgcctc ctgctcggcg gcaatatcga
    68281 tattgaagtc aggatagagt tgataaagag agcgaatttc gacgccttcc agcgtccttg
    68341 cctgttcaag catccgttta ttcgcatggg aatgatgcgg atacggatgc gcataaatta
    68401 taagaatcat aggtagcccg cgtgattacg cctttgtttt cccacaaagt gtagtcatat
    68461 attcacgcgg cttatagtca ataatattga ttcagaaaag agagaaatct gaacaattta
    68521 ccccattctc tgcccgcgga tcgtcatatt gctggtttgc gccagtgaca tccctcgatg
    68581 tctccggggc aaacgctacg gaaatcaaca agccaaacag cgagataccc gcccccatta
    68641 gcatcgtgtt actgataccg taattattga taaagatcgg cagtgcccag gtcgaaacaa
    68701 tggtgccaat acggcttaag gacataatca cgcccacggc agaggcgcgg atatctgtcg
    68761 ggaagagttc attaggatag agccactgca aattacccgg cccgccagag aaaaaggcat
    68821 acaccgcaaa ggccatcact accagccaga tccccatatc cgggatcagc cccaaaaccg
    68881 ccagcgccag cgtcatcatg gcaaagctgc caatcaacaa tggacgccgt ccggcagtgt
    68941 ttaaccacag catcggcgga atacagccga gcataaagaa caggctaatc accacgttcc
    69001 ccagcgccgc gtttttgcca acacccaatc ccaacaaacc aacgatttgc gggccaaagg
    69061 tgtaaatggc gaacattggg atcacctggc aggtccagat ggcggcaaca aacagaacaa
    69121 aaggaaaatg gcggcgatta aacagatcgc gaaaacgggt ttgctgcggc tgctcttcat
    69181 cgaaagccac cggttcgcca aacagtttta tcatcatctc ttcgcactct tttactcgcc
    69241 ctttgcgtaa taaccagcgg ggagattcag gcagttcgaa tcgaccaatc aaaatcaaca
    69301 aacaggggat cgccgcgcta cccagcatcc agcgccagcc gccttccaca tcataaagcc
    69361 agtagccgac cagatcggcg caggtcacgc cgacatacca catggcggcg ataaagctga
    69421 tggaaaatgc ccgctgacgg gtactggaga actcggtgat cattgaggtg gcgatgggat
    69481 aatctgcacc gatgacaatg ccgataagta cccgcatcac caacagttcg acgggggatg
    69541 aaacaaacat cgtcgccacc gatatcacgc cgatggcgat gatatcaatg aggaacattt
    69601 tgcgccgtcc gactttatcg gaaatatagc caaacagcga tgtgccaacg aacagcccgg
    69661 cgagcgttcc cgcgcccaac aagccaatcc agtcagcgtc cagttttagc gccggagtca
    69721 gttgctccag cgccacgcca atcattacca gtacataacc atcca
//
LOCUS       DADMHC010000002        66741 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.002, whole genome shotgun sequence.
ACCESSION   DADMHC010000002 DADMHC010000000
VERSION     DADMHC010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 66741)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 66741)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..66741
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.002"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..352)
                     /locus_tag="JNZ57_000062"
     CDS             complement(<1..352)
                     /locus_tag="JNZ57_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8826421.1"
                     /translation="MSKKLGFALSGLMLAMVAGTASADMDGGQLNISGLVVDNTCETR
                     VDGGNKDGLILLQTATVGEIDAGVLNDTVGAKAKPFSITVDCSKANPNPGSTAKMTFG
                     SVFFGNSKGTLNNDM"
     gene            complement(722..1201)
                     /gene="folK"
                     /locus_tag="JNZ57_000063"
     CDS             complement(722..1201)
                     /gene="folK"
                     /locus_tag="JNZ57_000063"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HAY8826422.1"
                     /translation="MTVAYIAIGSNLASPLEQVNAALKALGDIPESHILAVSSFYRTP
                     PLGPQDQPDYLNASVALETSLAPEELLNHTQRIELQQDRVRKAERWGPRTLDLDIMLF
                     GNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELAFPDGETLREVLHTRAFDELSKW"
     gene            complement(1198..2616)
                     /gene="pcnB"
                     /locus_tag="JNZ57_000064"
     CDS             complement(1198..2616)
                     /gene="pcnB"
                     /locus_tag="JNZ57_000064"
                     /EC_number="2.7.7.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000174652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HAY8826423.1"
                     /translation="MTLPRCTIFTRVANFCRKVLSREESEAEQAVARPQVTVIPREQH
                     AISRKDISENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKL
                     FRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGS
                     IEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLR
                     AVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCEY
                     HLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLL
                     ETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQG
                     KRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAPPDQKGMLNELDE
                     EPSPRRRTRRPRKRAPRREGTA"
     gene            complement(2655..3581)
                     /gene="gluQRS"
                     /locus_tag="JNZ57_000065"
     CDS             complement(2655..3581)
                     /gene="gluQRS"
                     /locus_tag="JNZ57_000065"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414686.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HAY8826424.1"
                     /translation="MLPPYFLFKEMTDTQYIGRFAPSPSGELHFGSLIAALGSYLQAR
                     ARQGRWLVRIEDIDPPREVPGAAETILRQLEHYGLHWDGDVLWQSQRHDAYREALAWL
                     HEQGLSYYCTCTRARIQSIVGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGII
                     HADEKLAREDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLF
                     GWKVPDYIHLPLALNPQGAKLSKQNHAPALPKGDPRPVLIAALQFLGQLAEAHWQDFS
                     VEQILQSAVKNWTLTAVPESAIVNSTFSNASC"
     gene            complement(3618..4073)
                     /locus_tag="JNZ57_000066"
     CDS             complement(3618..4073)
                     /locus_tag="JNZ57_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding transcription factor
                     DksA"
                     /protein_id="HAY8826425.1"
                     /translation="MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRIL
                     EAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT
                     LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG"
     gene            complement(4251..4955)
                     /gene="sfsA"
                     /locus_tag="JNZ57_000067"
     CDS             complement(4251..4955)
                     /gene="sfsA"
                     /locus_tag="JNZ57_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HAY8826426.1"
                     /translation="MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGC
                     ATRGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELS
                     GYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKH
                     LRELMNVAAEGLRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAE
                     ISAESMALKKSLPVTL"
     gene            complement(4970..5500)
                     /gene="thpR"
                     /locus_tag="JNZ57_000068"
     CDS             complement(4970..5500)
                     /gene="thpR"
                     /locus_tag="JNZ57_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414689.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HAY8826427.1"
                     /translation="MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHL
                     TLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQL
                     ANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFA
                     RGRTRYTPLKRWALMQ"
     gene            5574..8003
                     /gene="hrpB"
                     /locus_tag="JNZ57_000069"
     CDS             5574..8003
                     /gene="hrpB"
                     /locus_tag="JNZ57_000069"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase HrpB"
                     /protein_id="HAY8826428.1"
                     /translation="MSSLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAH
                     PGINGKIILLEPRRLAARNVAQRLEELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEG
                     VLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLD
                     NDRLQQMLPEASVVISEGRSFPVERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLF
                     LPGVGEIQRVQEQLASRIGSDVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAE
                     TSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGICLH
                     LIAKEQAERAAAQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPTVNLLAAKRL
                     LQMLGALEGERLSAQGQKMAALGNDPRLAAMLVSAKNDDEAATAAKIAAILEEPPRMG
                     NSDLGVAFSRNQPAWQQRSQQLLKRLNVRGGEADSSLIAPLLAGAFADRIARRRGQDG
                     RYQRANGMGAMLDADDALSRHEWLIAPLLLQGSASPDARILLALPVDIDELVQRCPQL
                     VQQSDTVEWDDAQGTLKAWRRLQIGLLTVKVQPLAKPSEDELHQAMLNGIRDKGLSVL
                     NWTAEAEQLRLRLLCAAKWLPEYDWPAVDDESLLATLETWLLPHMTGVHSLRGLKSLD
                     IYQALRGLLDWGMQQRLDSELPAHYTVPTGSRIAIRYHEDNPPALAVRMQEMFGEATN
                     PTIAQGRVPLVLELLSPAQRPLQITRDLSAFWKGAYREVQKEMKGRYPKHVWPDDPAN
                     TAPTRRTKKYS"
     gene            8199..10721
                     /gene="mrcB"
                     /locus_tag="JNZ57_000070"
     CDS             8199..10721
                     /gene="mrcB"
                     /locus_tag="JNZ57_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glycosyl
                     transferase/transpeptidase"
                     /protein_id="HAY8826429.1"
                     /translation="MAGNDREPIGRKGKPTRPVKQKVSRRRYEDDDDYDDYDDYEDEE
                     PMPRKGKGKGKGRKPRGKRGWLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQL
                     PAAVYGRMVNLEPDMTISKNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFD
                     FPDSKEGQVRARLTFDGDHLATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPR
                     SGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNL
                     FLSSERSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLYY
                     FGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQIIDQELYD
                     MLSARPLGVQPRGGVISPQPAFMQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAA
                     EKAAVEGIPALKKQRKLSDLETAIVIVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSI
                     GSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGQVWSPQNDDRRYSESGRVMLV
                     DALTRSMNVPTVNLGMALGLPAVTDTWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQA
                     FQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGT
                     GRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQPTKLYGASGAM
                     SIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSGGMRVLPVWTSDPQSLCQQSE
                     MQQQPSGNPFDQSSQPQQQPAQQEQKDSDGVAGWIKDMFGSN"
     gene            10941..13130
                     /gene="fhuA"
                     /locus_tag="JNZ57_000071"
     CDS             10941..13130
                     /gene="fhuA"
                     /locus_tag="JNZ57_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrichrome porin FhuA"
                     /protein_id="HAY8826430.1"
                     /translation="MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITV
                     TAAPAPQESPWGPAATIAAKHSATATKTDTPIEKTPQSISVVTNEEMQMHQFQSVKEA
                     LGYTPGVTVSSRGASNTYDFVIIRGFSSVGLNQNNYLDGLKLQGNFYNDAVIDPYMLE
                     RVELMRGPTSVLYGKSNPGGIISMVSKRPTTEPLKEIQFKMGTDNLFQTGFDFSDALD
                     DNGEFSYRLTGLARSTNEQQKNSESQRYTIAPSFSWRPDDKTNFTFLSYFQNEPETGY
                     YGWLPKEGTVEPLPNGKRLPTDFNEGASNNTYSRNQKMVGYSFEHGFNDTFTVRQNLR
                     FSEMKTSQKSVYGTGIAGDGHTLNRGTVVDNERLQNFSVDTQLESKFATGDVEHTLLT
                     GVDFMRMRNDINASFGSAPSIDLYNKYHPEYFAFGSAEPYQMNESKQTGIYVQDQAEW
                     NKWVFTLGGRYDWSKQATTVRENSYTPTEGYIERNDHQFTWRGGVNYLFDNGISPYFS
                     YSQSFEPSAFDLWSNPRISYKPSKGEQYEAGVKYVPNDMPVVVTGAVYQLTKTNNLTA
                     DPTNPLAQVPAGEIRARGVELEAKAALNANINLTASYTYTDAEYTKDTNLKGKTPEQV
                     PEHMASLWGDYTFNEGPLSGLTLGTGGRFIGSSYGDPANTFKVGSAAVMDAVVKYDLA
                     RFGMAGSSLAVNVNNLLDREYVASCFQTYGCFWGAERQVVATATFRF"
     gene            13181..13978
                     /gene="fhuC"
                     /locus_tag="JNZ57_000072"
     CDS             13181..13978
                     /gene="fhuC"
                     /locus_tag="JNZ57_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe3+-hydroxamate ABC transporter ATP-binding
                     protein FhuC"
                     /protein_id="HAY8826431.1"
                     /translation="MQEYTNHSDTTFALRNISFRVPGRTLLHPLSLTFPAGKVTGLIG
                     HNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAYLPQQLPPAEGMTV
                     RELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAM
                     LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYL
                     VALRGGEMIAQGTPAEIMRGDTLEMIYGIPMGILPHPAGAAPVSFVY"
     gene            13978..14868
                     /gene="fhuD"
                     /locus_tag="JNZ57_000073"
     CDS             13978..14868
                     /gene="fhuD"
                     /locus_tag="JNZ57_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-hydroxamate ABC transporter
                     substrate-binding protein FhuD"
                     /protein_id="HAY8826432.1"
                     /translation="MSGLPLISRRRLLTAMALSPLLWQMNTAHAAAIDPNRIVALEWL
                     PVELLLALGIVPYGVADTINYRLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVW
                     SAGYGPSAEMLARIAPGRGFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAQYED
                     FIRSMKPRFVKRGARPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWG
                     STAVSIDRLAAYKDVDVLCFDHDNSKDMDALMATPLWQAMPFVRAGRFQRVPAVWFYG
                     ATLSAMHFVRVLDNAIGGKA"
     gene            14865..16847
                     /gene="fhuB"
                     /locus_tag="JNZ57_000074"
     CDS             14865..16847
                     /gene="fhuB"
                     /locus_tag="JNZ57_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-hydroxamate ABC transporter permease
                     FhuB"
                     /protein_id="HAY8826433.1"
                     /translation="MSKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSP
                     DIDVIEQMIFHYSLLPRLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLG
                     ITVTTLWAIPGAMASQFAALAGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAI
                     NQLLVIFHHDQLQSMFLWSTGTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLD
                     DGVARNLGLALSLARLAALSLAIVISALLVNAVGIIGFIGLFAPLLAKMLGSRRLLPR
                     LMLASLIGALILWLSDQIILWLTRVWMEVSTGSVTALIGAPLLLWLLPRLRSISAPDM
                     KVNDRVAAERQHVLAFALAGGVLLLMAVVVALSFGRDAHGWMWASGALLDDLMPWRWP
                     RIIAALFAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGNAFGWL
                     LPAGSIGAAVTLLIIMIAAGRGGFSPHRMLLAGMALSTAFTMLLMMLQASGDPRMAQV
                     LTWISGSTYNATDAQVWRTGIVMVILLAITPLYRRWLTILPLGGDTARAVGMALTPTR
                     IALLLLAACLTATATMTIGPLSFVGLMAPHIARMMGFRRTMPHIVISALVGGLLLVFA
                     DWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLRKQSR"
     gene            complement(16882..18162)
                     /gene="hemL"
                     /locus_tag="JNZ57_000075"
     CDS             complement(16882..18162)
                     /gene="hemL"
                     /locus_tag="JNZ57_000075"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HAY8826434.1"
                     /translation="MSKSENLYSAARELLPGGVNSPVRAFTGVGGTPLFIEKADGAYL
                     YDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTEL
                     VPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTL
                     GQPNSPGVPADFAKHTLTCTYNDLASVRAAFEQYPQEIACIIVEPVAGNMNCVPPQPE
                     FLPGLRALCDEFGTLLIIDEVMTGFRVALAGAQDYYGVVPDLTCLGKIIGGGMPVGAF
                     GGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEG
                     LLEAAEEAGTPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVY
                     LAPSAFEAGFMSVAHSMEDINNTIDAARRVFAKL"
     gene            18387..19808
                     /gene="clcA"
                     /locus_tag="JNZ57_000076"
     CDS             18387..19808
                     /gene="clcA"
                     /locus_tag="JNZ57_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="H(+)/Cl(-) exchange transporter ClcA"
                     /protein_id="HAY8826435.1"
                     /translation="MKTDTPSLETPQAARLRRRQLIRQLLERDKTPLAILFMAAVVGT
                     LVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAP
                     EAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGR
                     MVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAV
                     FIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTQWLYLILGIIFGIFGPIFNKWVLGM
                     QDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLV
                     FIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVVVELFPQYHLEAGTFAIA
                     GMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILA
                     RTLAKQEAEQLARSKAASASENT"
     gene            19832..19897
                     /locus_tag="JNZ57_000077"
     CDS             19832..19897
                     /locus_tag="JNZ57_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8826436.1"
                     /translation="MAIIIGLEFAQLPMSFGAKYE"
     gene            19890..20234
                     /gene="erpA"
                     /locus_tag="JNZ57_000078"
     CDS             19890..20234
                     /gene="erpA"
                     /locus_tag="JNZ57_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HAY8826437.1"
                     /translation="MSDDVALPLEFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSG
                     FQYGFTFDDQVNEGDMTIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNA
                     KSTCGCGSSFSI"
     gene            complement(20281..20904)
                     /locus_tag="JNZ57_000079"
     CDS             complement(20281..20904)
                     /locus_tag="JNZ57_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRIC cation channel family protein"
                     /protein_id="HAY8826438.1"
                     /translation="MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGG
                     TIRDMALDHGPVFWVKDPTDLVVAMVTSMLTIVLVRQPRRLPKWMLPVLDAVGLAVFV
                     GIGVNKAFNAEAGPLIAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
                     HATAYYTFSVPLETASMMGMVVTLLIRLAAIRWHLKLPTFALDENGR"
     gene            complement(20947..21741)
                     /gene="btuF"
                     /locus_tag="JNZ57_000080"
     CDS             complement(20947..21741)
                     /gene="btuF"
                     /locus_tag="JNZ57_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005024031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter substrate-binding
                     protein BtuF"
                     /protein_id="HAY8826439.1"
                     /translation="MAKSLFRALVALSFLAPLWLNAAPRVITLSPANTELAFAAGITP
                     VGVSSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGI
                     KVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYAGKPKKRVFL
                     QFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGP
                     DQIPKIKQYWGEQLKIPVIPLTSDWFDVQAHVLSSLHNSSVMRFHR"
     gene            complement(21734..22432)
                     /gene="mtnN"
                     /locus_tag="JNZ57_000081"
     CDS             complement(21734..22432)
                     /gene="mtnN"
                     /locus_tag="JNZ57_000081"
                     /EC_number="3.2.2.16"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HAY8826440.1"
                     /translation="MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVA
                     LLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADV
                     TAFGYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAK
                     IRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQS
                     SLMVESLVQKLAHG"
     gene            22505..24022
                     /gene="dgt"
                     /locus_tag="JNZ57_000082"
     CDS             22505..24022
                     /gene="dgt"
                     /locus_tag="JNZ57_000082"
                     /EC_number="3.1.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dGTPase"
                     /protein_id="HAY8826441.1"
                     /translation="MAQIDFRKKINWHRRYRSPQGVKTEHEILRIFESDRGRIINSPA
                     IRRLQQKTQVFPLERNAAVRTRLTHSMEVQQVGRYIAKEILSRMKELKLLEAYGLDEL
                     TGPFESIVEMSCLMHDIGNPPFGHFGEAAINDWFRQRLHPEDAESQPLTDDRCSVAAL
                     RLRDGEEPLNELRRKIRQDLCHFEGNAQGIRLVHTLMRMNLTWAQVGGILKYTRPAWW
                     RGETPETHHYLMKKPGYYLSEEAYIARLRKELNLALYSRFPLTWIMEAADDISYCVAD
                     LEDAVEKRIFTVEQLYHHLHEAWGQHEKGSLFSLVVENAWEKSRSNSLSRSTEDQFFM
                     YLRVNTLNKLVPYAAQRFIDNLPAIFAGTFNHALLEDASECSDLLKLYKNVAVKHVFS
                     HPDVEQLELQGYRVISGLLEIYRPLLSLSLSDFTELVEKERVKRFPIESRLFHKLSTR
                     HRLAYVEAVSKLPSDYPEFPLWEYYYRCRLLQDYISGMTDLYAWDEYRRLMAVEQ"
     gene            24152..25576
                     /gene="degP"
                     /locus_tag="JNZ57_000083"
     CDS             24152..25576
                     /gene="degP"
                     /locus_tag="JNZ57_000083"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endoprotease DegP"
                     /protein_id="HAY8826442.1"
                     /translation="MKKTTLALSALALSLGLALSPLSATAAETSSATTAQQMPSLAPM
                     LEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGN
                     GGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRS
                     DIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNA
                     ENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNL
                     TSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGD
                     VITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSS
                     IFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKV
                     LDSKPSVLALNIQRGDSTIYLLMQ"
     gene            25754..26884
                     /locus_tag="JNZ57_000084"
     CDS             25754..26884
                     /locus_tag="JNZ57_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CdaR family transcriptional regulator"
                     /protein_id="HAY8826443.1"
                     /translation="MAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALL
                     VLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMT
                     AEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIV
                     EVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDH
                     RKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYF
                     YQDLMLPVLLDSLRGDWQANELARPLARLKAMDNNGLLRRTLAAWFRHNVQPLATSKA
                     LFIHRNTLEYRLNCISELTGLDLGNFDDRLLLYVALQLDEER"
     gene            complement(26973..27359)
                     /locus_tag="JNZ57_000085"
     CDS             complement(26973..27359)
                     /locus_tag="JNZ57_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000272186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3461 family protein"
                     /protein_id="HAY8826444.1"
                     /translation="MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAK
                     SVKFKYPRQRKTVVADGVGQGYKEVQEISPNLRYIIDELDQICQRDRSEVDLKRKILD
                     DLRHLESVVTNKISEIEADLEKLTRK"
     gene            complement(27521..28333)
                     /gene="yaeI"
                     /locus_tag="JNZ57_000086"
     CDS             complement(27521..28333)
                     /gene="yaeI"
                     /locus_tag="JNZ57_000086"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414706.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase YaeI"
                     /protein_id="HAY8826445.1"
                     /translation="MISRRRLLQATAATIATSSGFGYMHYWEPGWFELIRHRLAFFKD
                     NAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFS
                     DVLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSVGITVLFNQATVIATPNRQFE
                     LVGTGDLWAGQCKPPPASEANLPRLMLAHNPDSKEVMRDEPWDLMLCGHTHGGQLRVP
                     LVGEPFAPVEDKRYVAGLNAFGERHIYTTRGVGSLYGLRLNCRPEVTMLELV"
     gene            complement(28388..29212)
                     /gene="dapD"
                     /locus_tag="JNZ57_000087"
     CDS             complement(28388..29212)
                     /gene="dapD"
                     /locus_tag="JNZ57_000087"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HAY8826446.1"
                     /translation="MQQLQNIIETAFERRAEITPANADTVTREAVNQVISLLDSGALR
                     VAEKIDGQWVTHQWLKKAVLLSFRINDNQVIEGAESRYFDKVPMKFADYDEARFQKEG
                     FRVVPPAAVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRE
                     TGEIHYGRVPAGSVVVSGNLPSKDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID"
     gene            complement(29243..31915)
                     /gene="glnD"
                     /locus_tag="JNZ57_000088"
     CDS             complement(29243..31915)
                     /gene="glnD"
                     /locus_tag="JNZ57_000088"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     uridylyltransferase/uridylyl-removing protein GlnD"
                     /protein_id="HAY8826447.1"
                     /translation="MNTLPEQYANTALPTLPGQPQNPCVWPRDELTVGGIKAHIDTFQ
                     RWLGDAFDNGISAEQLIEARTEFIDQLLQRLWIEAGFSQIADLALVAVGGYGRGELHP
                     LSDIDLLILSRKKLPDDQAQKVGELLTLLWDVKLEVGHSVRTLEECMLEGLSDLTVAT
                     NLIESRLLIGDVALFLELQKHIFSEGFWPSDKFYAAKVEEQNQRHQRYHGTSYNLEPD
                     IKSSPGGLRDIHTLQWVARRHFGATSLDEMVGFGFLTSAERAELNECLHILWRIRFAL
                     HLVVSRYDNRLLFDRQLSVAQRLNYSGEGNEPVERMMKDYFRVTRRVSELNQMLLQLF
                     DEAILALPADEKPRPIDDEFQLRGTLIDLRDETLFMRQPEAILRMFYTMVRNSAITGI
                     YSTTLRQLRHARRHLQQPLCNIPEARKLFLSILRHPGAVRRGLLPMHRHSVLGAYMPQ
                     WSHIVGQMQFDLFHAYTVDEHTIRVMLKLESFASEETRQRHPLCVDVWPRLPSTELIF
                     IAALFHDIAKGRGGDHSILGAQDVVHFAELHGLNSRETQLVAWLVRQHLLMSVTAQRR
                     DIQDPEVIKQFAEEVQTENRLRYLVCLTVADICATNETLWNSWKQSLLRELYFATEKQ
                     LRRGMQNTPDMRERVRHHQLQALALLRMDNIDEEALHQIWSRCRANYFVRHSPNQLAW
                     HARHLLQHDLSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQI
                     FTTRDGMAMDTFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHF
                     TVETEVTFLPTHTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVED
                     LFIIATADRRALNNELQQEVHQRLTEALNPNDKG"
     gene            complement(31977..32771)
                     /gene="map"
                     /locus_tag="JNZ57_000089"
     CDS             complement(31977..32771)
                     /gene="map"
                     /locus_tag="JNZ57_000089"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HAY8826448.1"
                     /translation="MAISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRI
                     CNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIK
                     DGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAE
                     GFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMK
                     DGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIPAIISHDE"
     gene            33139..33864
                     /gene="rpsB"
                     /locus_tag="JNZ57_000090"
     CDS             33139..33864
                     /gene="rpsB"
                     /locus_tag="JNZ57_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HAY8826449.1"
                     /translation="MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLE
                     KTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLT
                     NWKTVRQSIKRLKDLETQSQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDA
                     LFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVA
                     ATVREGRSQDLASQAEESFVEAE"
     gene            34122..34973
                     /gene="tsf"
                     /locus_tag="JNZ57_000091"
     CDS             34122..34973
                     /gene="tsf"
                     /locus_tag="JNZ57_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HAY8826450.1"
                     /translation="MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKS
                     GAIKAAKKAGNVAADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVA
                     GKITDVEVLKAQFEEERVALVAKIGENINIRRVAALEGDVLGSYQHGARIGVLVAAKG
                     ADEELVKHIAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEG
                     RMKKFTGEVSLTGQPFVMEPSKTVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEV
                     AAMSKQS"
     gene            35120..35845
                     /gene="pyrH"
                     /locus_tag="JNZ57_000092"
     CDS             35120..35845
                     /gene="pyrH"
                     /locus_tag="JNZ57_000092"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000224576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HAY8826451.1"
                     /translation="MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKEL
                     VELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNA
                     RLMSAIPLNGVCDSYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADV
                     VLKATKVDGVFTADPAKDPTATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVF
                     NMNKPGALRRVVMGEKEGTLITE"
     gene            36137..36694
                     /gene="frr"
                     /locus_tag="JNZ57_000093"
     CDS             36137..36694
                     /gene="frr"
                     /locus_tag="JNZ57_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000622421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HAY8826452.1"
                     /translation="MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEY
                     YGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPL
                     PPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDV
                     QKLTDAAIKKIEAALADKEAELMQF"
     gene            36786..37982
                     /gene="ispC"
                     /locus_tag="JNZ57_000094"
     CDS             36786..37982
                     /gene="ispC"
                     /locus_tag="JNZ57_000094"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HAY8826453.1"
                     /translation="MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVE
                     QCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIV
                     GAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSL
                     PQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKI
                     SVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDM
                     RTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTA
                     LNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKE
                     VMRLAS"
     gene            38171..38929
                     /gene="ispU"
                     /locus_tag="JNZ57_000095"
                     /gene_synonym="uppS"
     CDS             38171..38929
                     /gene="ispU"
                     /locus_tag="JNZ57_000095"
                     /gene_synonym="uppS"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308203.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl-diphosphate-specific
                     ditrans,polycis-undecaprenyl-diphosphate synthase"
                     /protein_id="HAY8826454.1"
                     /translation="MLSATQPLSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKA
                     GAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRH
                     NVRLRIIGDTSRFNSRLQECIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEK
                     VQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDV
                     LWPDFDEQDFEGALNAFANRERRFGGTEPGDETA"
     gene            38942..39799
                     /gene="cdsA"
                     /locus_tag="JNZ57_000096"
     CDS             38942..39799
                     /gene="cdsA"
                     /locus_tag="JNZ57_000096"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414717.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HAY8826455.1"
                     /translation="MLKYRLISAFVLIPVVIAALFLLPPVGFAIVTLVVCMLAAWEWG
                     QLSGFTTRSQRVWLAVLCGLLLALMLFLLPEYHRNIHQPLVEISLWASLGWWIVALLL
                     VLFYPGSAAIWRNSKTLRLIFGVLTIVPFFWGMLALRAWHYDENHYSGAIWLLYVMIL
                     VWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVISWGYGMWANLDVAPV
                     TLLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFAC
                     LLLLVFRTL"
     gene            39811..41163
                     /gene="rseP"
                     /locus_tag="JNZ57_000097"
     CDS             39811..41163
                     /gene="rseP"
                     /locus_tag="JNZ57_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma E protease regulator RseP"
                     /protein_id="HAY8826456.1"
                     /translation="MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGF
                     GKALWRRTDKLGTEYVIALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIA
                     AGPVANFIFAIFAYWLVFIIGVPGVRPVVGEMAANSIAAEAQIAPGTELKAVDGIETP
                     DWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPR
                     GLQIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEI
                     ERQGSPLSLTLIPESKPGNGKAIGFVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKT
                     WQLMKLTVSMLGKLITGDVKLNNLSGPISIAKGAGMTAELGVVYYLPFLALISVNLGI
                     INLFPLPVLDGAHLLFLAIEKIKGGPVSERVQDFCYRIGSILLVLLMGLALFNDFSRL
                     "
     gene            41193..43625
                     /gene="bamA"
                     /locus_tag="JNZ57_000098"
     CDS             41193..43625
                     /gene="bamA"
                     /locus_tag="JNZ57_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HAY8826457.1"
                     /translation="MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALL
                     SMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGN
                     KSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPR
                     NRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQK
                     LAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGN
                     LAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKT
                     VKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRL
                     GFFETVDTDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWL
                     GTGYAVGINGTKNDYQTYAELSVTNPYFTVDGVSLGGRLFYNDFQADDADLSDYTNKS
                     YGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSDQDNSFK
                     TDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDD
                     HKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNY
                     DPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFITPTPFISDKYANSVRTSFFWD
                     MGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDK
                     AEQFQFNIGKTW"
     gene            43747..44232
                     /gene="skp"
                     /locus_tag="JNZ57_000099"
                     /gene_synonym="hlpA"
                     /gene_synonym="ompH"
     CDS             43747..44232
                     /gene="skp"
                     /locus_tag="JNZ57_000099"
                     /gene_synonym="hlpA"
                     /gene_synonym="ompH"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone Skp"
                     /protein_id="HAY8826458.1"
                     /translation="MKKWLLAAGLGLALATSAQAADKIAIVNMGSLFQQVAQKTGVSN
                     TLENEFKGRASELQRMETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQTFAQKAQAFE
                     QDRARRSNEERGKLVTRIQTAVKSVANSQDIDLVVDANAVAYNSSDVKDITADVLKQV
                     K"
     gene            44236..45261
                     /gene="lpxD"
                     /locus_tag="JNZ57_000100"
     CDS             44236..45261
                     /gene="lpxD"
                     /locus_tag="JNZ57_000100"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HAY8826459.1"
                     /translation="MPSIRLADLAQQLDAELHGDGDIVITGVASMQSAQTGHITFMVN
                     PKYREHLGLCQASAVVMTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPQPAQNIAP
                     SAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTI
                     YHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRG
                     ALDDTVIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGH
                     MEICDKVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAALVMNIDDMSKRLKSLE
                     RKVNQQD"
     gene            45366..45821
                     /gene="fabZ"
                     /locus_tag="JNZ57_000101"
     CDS             45366..45821
                     /gene="fabZ"
                     /locus_tag="JNZ57_000101"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000210741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HAY8826460.1"
                     /translation="MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNV
                     SVNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFK
                     RPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA"
     gene            45825..46613
                     /gene="lpxA"
                     /locus_tag="JNZ57_000102"
     CDS             45825..46613
                     /gene="lpxA"
                     /locus_tag="JNZ57_000102"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HAY8826461.1"
                     /translation="MIDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVGIGEGTVL
                     KSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGT
                     VQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVH
                     QFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNA
                     YKLIYRSGKTLDEVKPEIAELAETYPEVKAFTDFFSRSTRGLIR"
     gene            46613..47761
                     /gene="lpxB"
                     /locus_tag="JNZ57_000103"
     CDS             46613..47761
                     /gene="lpxB"
                     /locus_tag="JNZ57_000103"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HAY8826462.1"
                     /translation="MTEQRPLTIALVAGETSGDILGAGLIRALKERVPNARFVGVAGP
                     RMQAEGCEAWYEMEELAVMGIVEVLGRLRRLLHIRADLTKRFGELKPDVFVGIDAPDF
                     NITLEGNLKKQGIKTIHYVSPSVWAWRQKRVFKIGRATDLVLAFLPFEKAFYDKYNVP
                     CRFIGHTMADAMPLDPDKNAARDVLGIPHDAHCLALLPGSRGAEVEMLSADFLKTAQL
                     LRQTYPDLEIVVPLVNAKRREQFERIKAEVAPDFSVHLLDGMGREAMVASDAALLASG
                     TAALECMLAKCPMVVGYRMKPFTFWLAKRLVKTDYVSLPNLLAGRELVKELLQEECEP
                     QKLAAALLPLLANGKISHAMHDTFRELHQQIRCNADEQAAQAVLELAQ"
     gene            47758..48354
                     /gene="rnhB"
                     /locus_tag="JNZ57_000104"
     CDS             47758..48354
                     /gene="rnhB"
                     /locus_tag="JNZ57_000104"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HAY8826463.1"
                     /translation="MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLN
                     DSKKLSEKRRLALCEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAP
                     EYVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFA
                     QHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRALGLAS"
     gene            48391..51873
                     /gene="dnaE"
                     /locus_tag="JNZ57_000105"
     CDS             48391..51873
                     /gene="dnaE"
                     /locus_tag="JNZ57_000105"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HAY8826464.1"
                     /translation="MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDF
                     TNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLIS
                     KAYQRGYGAAGPIIDRDWLIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEE
                     HFPDRYFLELIRTGRLDEESYLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVA
                     IHDGFTLDDPKRPRNYSPQQYMRSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEY
                     FLPQFPTGDMSTEDYLVKRAKEGLEERLAFLFPDEEERVKRRPEYDERLETELQVINQ
                     MGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFL
                     NPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLG
                     HPYGFVDRISKLIPPDPGMTLAKAFEAEPQLPEIYEADEEVKALIDMARKLEGVTRNA
                     GKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDFLGLRTLTIIN
                     WALEMINKRGAKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLQ
                     PDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREEISYPDVQWQHESLKPVLEPTYG
                     IILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFAEGAEKNGINAEL
                     AMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVV
                     GLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNKG
                     GYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAK
                     AEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKE
                     IERYVGGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLDDRSGRLEVML
                     FTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKYASGLAISL
                     TDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDL
                     RGLIGSEQVELEFD"
     gene            51886..52845
                     /gene="accA"
                     /locus_tag="JNZ57_000106"
     CDS             51886..52845
                     /gene="accA"
                     /locus_tag="JNZ57_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HAY8826465.1"
                     /translation="MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLR
                     EKSVELTRKIFADLGAWQIAQLARHLQRPYTLDYVRLAFDEFDELAGDRAYADDKAIV
                     GGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITF
                     IDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVN
                     MLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAH
                     RNPEAMAASLKAQLLADLADLDVLSTEDLKNRRYQRLMSYGYA"
     gene            52944..55085
                     /gene="ldcC"
                     /locus_tag="JNZ57_000107"
     CDS             52944..55085
                     /gene="ldcC"
                     /locus_tag="JNZ57_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine decarboxylase LdcC"
                     /protein_id="HAY8826466.1"
                     /translation="MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLK
                     FIEHNPRICGVIFDWDEYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWF
                     FEYALGQAEDIAIRMRQYTNEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQK
                     SPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTN
                     GTSTSNKIVGMYAAPSGSTLLIDRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIP
                     HREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWV
                     PYTHFHPIYQGKSGMSGERVAGKVIFETQSTHKMLAALSQASLIHIKGEYDEEAFNEA
                     FMMHTTTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWF
                     FDIWQPPQVDEAECWPVAPGEQWHGFNDADADHMFLDPVKVTILTPGMDEQGNMSEEG
                     IPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKRSYDLNLRI
                     KNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKHDLPGLMLWAFDTLPEMIMTPHQAW
                     QRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLMPGEMLTKESRTVLDFLLMLCSV
                     GQHYPGFETDIHGAKQDEDGVYRVRVLKMAG"
     gene            55142..55531
                     /locus_tag="JNZ57_000108"
     CDS             55142..55531
                     /locus_tag="JNZ57_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308216.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HAY8826467.1"
                     /translation="MLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSW
                     KGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAFSVDDIDAAVAHLESHNVKCEA
                     ICVDPYTQKRFTFFNDPDGLPLELYEQ"
     gene            55596..56894
                     /gene="tilS"
                     /locus_tag="JNZ57_000109"
     CDS             55596..56894
                     /gene="tilS"
                     /locus_tag="JNZ57_000109"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HAY8826468.1"
                     /translation="MTLTLNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTL
                     RAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQLAQEGLGIEAQARQARYQAFA
                     RTLLPGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMAEVSEFAGTRLIRPLLARTR
                     GELAQWALAHGLRWIEDESNQDDSYDRNFLRLRVVPLLQQRWPHFAEATARSAALCAE
                     QESLLDELLADDLAHCQTSQGTLQIAPMLAMSDARRAAIIRRWLAGQNAPMPSRDALV
                     RIWQEVALAREDASPCLRLGAFEIRRYQSQLWWIKSVTGQSETIVPWQTWLQPLELPA
                     GLGSVQLTAGGDIRPPRADEAVSVRFKSAGLLHIVGRNGGRKLKKIWQELGVPPWLRD
                     TTPLLFYGETLIAAAGVFVTQEGVAEGENGVSFVWQKTLS"
     gene            complement(56943..57203)
                     /gene="rof"
                     /locus_tag="JNZ57_000110"
     CDS             complement(56943..57203)
                     /gene="rof"
                     /locus_tag="JNZ57_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rho-binding antiterminator"
                     /protein_id="HAY8826469.1"
                     /translation="MSMNDTYQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASD
                     LVSRKNVEYLVVEAAGETRELRLDKITSFSHPEIGTVVVSES"
     gene            complement(57190..57390)
                     /locus_tag="JNZ57_000111"
     CDS             complement(57190..57390)
                     /locus_tag="JNZ57_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeP family protein"
                     /protein_id="HAY8826470.1"
                     /translation="MEKYCELIRKRYAEIASGDLGYVPDALGCVLKVLNEMAADDALS
                     EAVREKAAYAAANLLVSDYVNE"
     gene            57556..58101
                     /locus_tag="JNZ57_000112"
     CDS             57556..58101
                     /locus_tag="JNZ57_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeQ family protein"
                     /protein_id="HAY8826471.1"
                     /translation="MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRL
                     LAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELALPDERRIKKACTQAAEV
                     ALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGV
                     IWLSDDKNNLEVNLTAWQQPS"
     gene            58098..58520
                     /gene="arfB"
                     /locus_tag="JNZ57_000113"
     CDS             58098..58520
                     /gene="arfB"
                     /locus_tag="JNZ57_000113"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HAY8826472.1"
                     /translation="MIVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIR
                     ASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQ
                     KARRPTRPTRASKERRLASKAQKSSVKAMRGKVRSGRE"
     gene            58534..59244
                     /gene="nlpE"
                     /locus_tag="JNZ57_000114"
                     /gene_synonym="cutF"
     CDS             58534..59244
                     /gene="nlpE"
                     /locus_tag="JNZ57_000114"
                     /gene_synonym="cutF"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308221.1"
                     /note="NlpE, an outer membrane lipoprotein, interacts
                     directly with CpxA, the sensor histidine kinase of the Cpx
                     system for response to envelope stress; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response activation lipoprotein
                     NlpE"
                     /protein_id="HAY8826473.1"
                     /translation="MVKKAIVTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQS
                     WRGVLPCADCEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTD
                     SKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEPAQSSLPMTPMTLRGMYFYMADAA
                     TFTDCATGKRFMVANNAELERGYLAARGHSEKPVLLSVEGHFTLEANPDTGAPTKVLA
                     PDTAGKFYPNKDCSSLGQ"
     gene            complement(59444..60268)
                     /locus_tag="JNZ57_000115"
     CDS             complement(59444..60268)
                     /locus_tag="JNZ57_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeF family permuted papain-like enzyme"
                     /protein_id="HAY8826474.1"
                     /translation="MDKPKAYCRLLLPSFLLLSACTVDISQPDPSATAVDAEAKTWAV
                     KFQHQSSFTEQSIKEITAPDLKPGDLLFSSSLGVTSFGIRVFSTSSVSHVAIFLGDNN
                     VAEATGAGVQIVSLKKAMKHSDKLFVLRVPDLTPQQATDITAFANKIKDSGYNYRGIV
                     EFIPFMVTRQMCSLNPFSEDFRQQCVSGLAKAQLSSVGEGDKKSWFCSEFVTDAFAKA
                     GHPLTLAQSGWISPADLMHMRIGDVSAFKPETQLQYVGHLKPGIYIKAGRFVGLTR"
     gene            complement(60321..62039)
                     /gene="proS"
                     /locus_tag="JNZ57_000116"
     CDS             complement(60321..62039)
                     /gene="proS"
                     /locus_tag="JNZ57_000116"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HAY8826475.1"
                     /translation="MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLP
                     TGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGER
                     PFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDA
                     YSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGE
                     DDVVFSDTSDYAANIELAEAIAPKEPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEK
                     TVKTLLVKAVEGSSFPLVALLVRGDHELNEVKAEKLPQVASPLTFATEEEIRAVVKAG
                     PGSLGPVNMPIPVVIDRTVAAMSDFAAGANIDGKHYFGINWDRDVATPEVADIRNVVA
                     GDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTR
                     VVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVL
                     LDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYL
                     VKQIKG"
     gene            complement(62150..62857)
                     /gene="tsaA"
                     /locus_tag="JNZ57_000117"
     CDS             complement(62150..62857)
                     /gene="tsaA"
                     /locus_tag="JNZ57_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HAY8826476.1"
                     /translation="MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQ
                     ADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGM
                     SLVELKEVVCHKDSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAE
                     MAVSFTAEVENQLLTLEKRYPQLTLFIREVLAQDPRPAYHKGEETGKTYAVWLHDFNV
                     RWRVTDAGFEVFALEPR"
     gene            complement(62854..63258)
                     /gene="rcsF"
                     /locus_tag="JNZ57_000118"
     CDS             complement(62854..63258)
                     /gene="rcsF"
                     /locus_tag="JNZ57_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rcs stress response system protein RcsF"
                     /protein_id="HAY8826477.1"
                     /translation="MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAP
                     RATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKAN
                     AVLLHSCEVTSGTPGCYRQAVCIGSALNITAK"
     gene            complement(63376..64191)
                     /gene="metQ"
                     /locus_tag="JNZ57_000119"
     CDS             complement(63376..64191)
                     /gene="metQ"
                     /locus_tag="JNZ57_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter substrate-binding
                     lipoprotein MetQ"
                     /protein_id="HAY8826478.1"
                     /translation="MAFKFKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQ
                     VAEVAQKVAKDKYGLDVELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYK
                     LVAVGNTFVYPIAGYSKKIKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDG
                     VGLLPTVLDVVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGI
                     FVEDKDSPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEAANKVFNGGAVKGW"
     gene            complement(64231..64884)
                     /gene="metI"
                     /locus_tag="JNZ57_000120"
     CDS             complement(64231..64884)
                     /gene="metI"
                     /locus_tag="JNZ57_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter permease MetI"
                     /protein_id="HAY8826479.1"
                     /translation="MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPG
                     QIIANAKLYRTVSAIVNIFRSIPFIILLVWTIPFTRVIVGTSIGLQAAIVPLTVGAAP
                     FIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGY
                     SAMGGAVGAGGLGQIGYQYGYIGYNATVMNTILVLLVILVYLIQFAGDRIVRAVTRK"
     gene            complement(64877..65908)
                     /gene="metN"
                     /locus_tag="JNZ57_000121"
     CDS             complement(64877..65908)
                     /gene="metN"
                     /locus_tag="JNZ57_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014168731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein
                     MetN"
                     /protein_id="HAY8826480.1"
                     /translation="MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGK
                     STLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGN
                     VALPLELDNTPKDEIKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPK
                     VLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGE
                     LIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQ
                     SVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHH
                     VKVEVLGYV"
     gene            66096..66668
                     /gene="gmhB"
                     /locus_tag="JNZ57_000122"
     CDS             66096..66668
                     /gene="gmhB"
                     /locus_tag="JNZ57_000122"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001520530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HAY8826481.1"
                     /translation="MAKSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKK
                     MGFVLVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEE
                     FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAAAANVGTKVLVRTGKP
                     ITSEAENAADWVLNSLADLPQAIKKQQKPV"
BASE COUNT        15885 a        16505 c        18280 g        16071 t
ORIGIN      
        1 acatgtcgtt gttcagcgtt cctttgctat taccaaagaa aacagaaccg aaggtcattt
       61 tagctgtact acctggattc ggatttgctt tgctgcagtc aacggtgatg ctgaaaggtt
      121 tggctttagc gccaacggtg tcattcagca cgccagcatc gatttcacca acagttgcag
      181 tttgcagcag gatcagacca tctttattac cgccgtcaac gcgggtttca caggtgttat
      241 caacaaccag accactgata tttaactgac caccatccat atcagcagaa gcagtacctg
      301 caaccattgc cagcataaga ccagacaggg caaaacctaa ttttttagac ataaaaatcc
      361 ttgaataaaa ttccattagt cagactactg gtttgaagaa tgactattca tgacacaaat
      421 gttataagca gatgctagat attaatgagt aatgatattt gttaccaaaa tttacagcta
      481 ttgttcatta ggacgcctat tgtgcacttt aagggctttt gaacaaatta aattttctta
      541 attcaaaatt aagcaaaaat aaattcacaa gtgcaattgg ttagggtatg gcgatgggat
      601 tgatatttat ctgcgggaat ttatattatg tttctgcaaa aatgtttaaa ctaaaatttt
      661 tattaaggaa agagaggatg tatgattttc agaaaatatt tatattcgta atataaataa
      721 attaccattt gcttaattcg tcaaatgctc ttgtatgtaa gacttcacgc aacgtctccc
      781 catcaggaaa cgccagctcc ggtgcaatct caaacagcgg ccacagcata aatccacgat
      841 tcttcatatc gtagtgcgga acggtcaggc gttcggtatt tatcacttca ttaccaaaca
      901 gcatgatatc gagatccagc gtgcgtggtc cccagcgttc agctttacga acacgatcct
      961 gttgcagttc tatgcgctgt gtatggttga gtaactcttc cggggcgagc gaagtttcaa
     1021 gcgccacgga ggcgttgagg taatcgggtt gatcttgcgg ccccagcggt ggagtgcggt
     1081 aaaacgaaga aacggcaaga atgtggcttt cagggatatc gcctaatgct ttcagggcag
     1141 cattgacctg ctccagcgga gaggccagat tgctgcctat ggcaatatac gccactgtca
     1201 tgcggtaccc tcacgacgcg gtgcgcgttt gcgtggacga cgagtacggc gacgcggtga
     1261 cggctcttca tccaactcgt taagcatccc tttttgatct ggtggcgcgg aaacctggaa
     1321 ctcaccccac catttcacca gacgctgcag ttcagcgtta cgttcaactt cagctcgcaa
     1381 ggccaacagg tcataagccg cacggaactt aggatgctcc agcagtttcc atgcgcgttt
     1441 accctgacga cgggacatac gcaactgcaa ctgccagata tcgcgggtta acgtcgtcag
     1501 acgtttcggg attgccagtg aacggcaggc ttcgtccagc acgtcgttca tcgccagcgc
     1561 gaaagcgtcg tgataggtca ggccgctttc ctgggcgatc ttctgtgccg tctccagcag
     1621 tgggtaccag aacatggcgg caaacaagaa cgccgggttc acgcgcatat cgttatggat
     1681 acgcgtatcg gtattcttca gcacctgttc aatgatccgc tccatcgggc tgtcgccatt
     1741 ttccgtgaag tagcgggtaa tggtcgggaa cagcggctgg aacagatgat attcacacaa
     1801 cagcttatag gtttcgtaac cgtagcccgc ttgtagcagt ttaagcgatt cttcaaacag
     1861 gcgtgccggt gggatatcgt tcagcagggt agcgaggcga gggatcggtt ctgcggtttc
     1921 cgggctgatg cgcataccca atttggcggc aaaacgtacc gcgcgcagca tacgtaccgg
     1981 atcttcacgg tagcgcgttt ccgggttacc aatcagacgg ataacgccgt ccttcagatc
     2041 cttcatgccg ccaacgtaat cacggacggt aaaatccgct acgctgtaat acaggctgtt
     2101 gatagtgaaa tcgcggcgct gggcgtcttc ttcgatggag ccgaaaatgt tgtcgcgcag
     2161 caacatgccg ttttgcccgc gttgggaggt cgtgcggtcg ctgacgttac cttcgtggtg
     2221 tccacggaag gttgcaactt cgataatctc cgggccaaac atcacatgag ccagacggaa
     2281 acggcgaccc acaaggcggc agttacggaa cagtttgcgc acctgctcag gcgtggcgtt
     2341 agtggttacg tcaaaatctt tcggcttttt gccaagtaac aggtcgcgca cgccgccgcc
     2401 aaccagccag gcttcgtatc ccgctttatt gagcctgtac attaccttca gggcattttc
     2461 actgatatct ttgcgggaaa tagcatgctg ctcacgcggg atcaccgtca cctgtggacg
     2521 ggcgactgcc tgttcagcct cgctttcctc gcggcttagc accttgcggc aaaaattagc
     2581 gactcgggta aaaatagtac acctcggtag tgtcaaacat cattcaggac aaaaaaatag
     2641 cggctaatca tagctcagca tgacgcattt gagaatgttg aatttacaat tgccgactcg
     2701 ggcacggcgg tcagcgtcca gtttttgacg gctgactgaa ggatttgctc gacgctgaaa
     2761 tcctgccagt gtgcttctgc cagctgcccc agaaattgaa gtgccgcgat tagtaccggg
     2821 cgtggatcgc ctttcggcaa cgcaggcgca tgattctgct tggaaagttt agcgccttgt
     2881 ggattaagcg ccagcggcag atgaatgtaa tctggcactt tccagccaaa aagctggtac
     2941 agcgagattt gccttactgt tggttcaatc agatcagccc cacgcactat ttctgtaacg
     3001 ccctggaaat gatcatcaac cacaacagcc aggttgtagg cgaacaaccc atcacggcga
     3061 tgaatgataa aatcttcccg tgccagtttt tcgtcggcgt gaataatgcc gcgcagctgg
     3121 tcagtaaatt gcgtgaccgg atgctgctgg cggatacgca ctgcggcgtt gtctggtcca
     3181 tgatgcaaca cccggcaatg accgtcgtaa ataccgacaa tgctttgaat acgcgcacgc
     3241 gtacaggtgc agtaataact tagtccttgt tcatgtaacc aggcgagtgc ttcacgatag
     3301 gcgtcgtgac gttgcgattg ccagagaaca tcgccgtccc agtgcagacc gtaatgttcc
     3361 agctggcgca ggatagtttc tgcggcaccg ggaacttcac gaggcgggtc gatatcttct
     3421 atgcgtacca gccagcgacc ttgccgggcg cgagcctgca aatagctgcc gagcgcggcg
     3481 atcagagagc caaaatgaag ctcgccggaa ggagaggggg cgaagcggcc aatatactgt
     3541 gtgtctgtca tctctttgaa caaaaaataa ggcgggagca tttcccgcct gtggtaaacg
     3601 tgatggaacg gctgtaatta gccagccatc tgtttttcgc gaatttcagc cagcgttttg
     3661 cagtcgatgc acagatcggc tgtcgggcgc gcttccagac ggcgaatacc aatttcaaca
     3721 ccgcaggatt cgcagtagcc gaaatcttcg tcttccactt ttttcagcgt cttctcgatc
     3781 tttttgatca gcttacgctc gcgatcgcgg ttacgcagtt cgaggctgaa ctcttcttcc
     3841 tgggctgcac ggtctaccgg gtccgggaag ttggctgctt catcctgcat atgtgtaacg
     3901 gtgcgatcga cttcatccct gagttgatta cgccatgctt ccagaatacg acggaagtgc
     3961 gccagctggg cttcattcat atactcttcg cccggcttct cctgatatgg ttccacccca
     4021 gcgatggcga gaatactcag ggacgatgtt ttacggtttt gcccttcttg catgttgctt
     4081 ctccttaaca cgcactatcg atccccatgt tcgggggaaa aatgaggccg ctataaatag
     4141 cagatgcttt tccggatagc aattatctaa acgtaacact tgacaactgt gtgaggaaaa
     4201 gcgtatttgc gcacgcgacc agaatgtaaa ttaaccagtt acttacttta ctacaatgta
     4261 accggcagtg attttttaag agccatgctt tcagcagaaa tttccgcttt gtaagccaga
     4321 atttctaccc ccctctgttg agcttctgac aatagttgcg cgtatttctc atcgatgtgg
     4381 cgcgcgggtg aaaaccgtgt aatggctgaa tgcagcacgg cgaaaaagat aaccgcacgc
     4441 aggccttcag ccgctacgtt catcaactcc cgaaggtgtt tctgacctcg ttcagtgacc
     4501 gcatcgggaa aatatccctg ttcgttctcc gctaacgtaa ccgatttcac ttcaatatag
     4561 cagtctggac gcgaatccgc ctgcaacata aagtcaatac ggctgcgttc tgcgccatat
     4621 tttacttcgc ttttcagcga gctatagcct gacagttctg aaattgattc attaaggata
     4681 gcctctttcg tcaacctgtt agcccaaagc gtattgacgc aaataaatgc gccgctctgg
     4741 ctttgagtta gttcccaggt gtgtgggtat ttccgtttgg tgttgtctga agtcgaatac
     4801 cagacggtat cgccacgcgt tgcacaaccg gtcatcgcac ccgtattcgg gcagtgtagc
     4861 gttaattcgc gaccatcggg tgtgatcaca tcggctaaaa aacgtttgta acgctgaatt
     4921 agcgtcgcgc gctgtagagg gggagagaat tccattgcga caatccttgt tattgcatta
     4981 gcgcccagcg ttttagcggc gtgtagcgtg tgcgtccacg ggcaaacgag gaggcgtaaa
     5041 gggtgaactc cgtcaccgca taagaccagt taaaacctgg cggcgggatt gtcaccgcct
     5101 cgctggcgtc gcgcaataag gtaatatgtg gatgaaacgg acgattgctt tgaaaacaac
     5161 cgctgcgggc agcctgtgaa cggagcatat tcgccagctg gattaagccg cgtggcggct
     5221 gacgcatccc taaccacacc acacgcgaac gcagccattg tccggcgtca tcaagcgtga
     5281 gtgtgaaacc aggttgacga atccgtccgg ctaaaagaga aagcgccttc tctttctcgg
     5341 cgctcacttc gcctaaaaat gccagagtca gatgcaaatt atcggcggcg accggacgtc
     5401 ccgcctcagg tgggaagtgt gtggcgcgcc agtggataat ctgttcgcgg atttctgcag
     5461 gtaagtcgat agcaaagaac agacgttgcg gttcagacat gtgaggcact cggttatgaa
     5521 ttaccgcgat gctacaatgt ggcgcgaaga atgttaaccc tctggagcgt tttgtgtcgt
     5581 cgttgcccgt tgctgccgtc ttacctgaat tacttaccgc tctcgattgt gcgccgcagg
     5641 tattattaag tgcgccgacc ggggccggga aatcaacctg gctgccgctg caactgctgg
     5701 cgcatcccgg cattaacggg aaaattatcc tgctggagcc gcgtcgtctg gcggcgcgta
     5761 acgtcgcgca acggctggag gagctgctta acgaaaagcc aggcgatacc gttggctacc
     5821 ggatgcgtgc gcaaaactgc gtcgggccga atacccgcct ggaagtagtt accgaaggcg
     5881 tgctgacgcg gatgatccag cgtgacccgg agttgagcgg tgttggattg gtgatccttg
     5941 atgaatttca tgagcgtagc ttgcaggcgg atttggcgtt ggcgctgtta ctcgatgtgc
     6001 aacaaggtct gcgtgatgac cttaaactgc taattatgtc ggctacgctg gacaacgacc
     6061 gcttgcagca aatgctgcca gaagcgtccg tcgtcatctc agaagggcgc tcgtttccgg
     6121 ttgaacgccg ttatttaccg ctgcccgcgc atcagcgttt tgacgatgcc gttgcggtag
     6181 ccaccgctga aatgctgcgt caggaaagcg gatcattact gttattttta cctggcgtcg
     6241 gagaaattca gcgtgtgcag gaacaactgg cttcgcgcat cggcagtgat gtattgctct
     6301 gcccgctgta tggcgcgttg tcgctgaacg atcagcgaaa agcgatcctc ccggcaccgc
     6361 aagggatgcg caaagtggtg ctggcgacca atattgctga aaccagttta accatcgaag
     6421 gtattcgtct ggtggtggat tgtgcccagg agcgtgtggc gcgttttgat ccgcgcacgg
     6481 ggctaacgcg actgattact caacgcgtta gccaggcatc catgacgcag cgtgccgggc
     6541 gcgccgggcg tctggagccg ggtatctgcc tgcatctaat cgccaaagaa caagcagaac
     6601 gcgctgccgc gcaaagtgaa ccggaaatct tacaaagcga tctttccggt ttgctgatgg
     6661 aattactgca atggggatgc agcgatccgg cgcagatgag ctggctggat caaccgccaa
     6721 cggtgaatct actggccgcg aaacgcctgt tacaaatgct gggggcgctg gagggtgaac
     6781 ggcttagtgc gcaggggcaa aaaatggcag cgctgggtaa cgatccgcgt ttagcggcaa
     6841 tgctggttag cgcgaagaac gacgacgaag ctgctaccgc ggcaaaaatt gccgccattc
     6901 tcgaagagcc gccacggatg ggcaatagtg acctgggcgt ggcgttttcg cgcaatcaac
     6961 cagcctggca gcaacgtagt cagcaactgt taaaacgctt aaacgtacgt ggcggtgagg
     7021 cagacagttc gcttatcgcg ccgctacttg ccggggcgtt tgccgatcgc attgctcgtc
     7081 gccgtgggca agatggacgc tatcaacggg caaacggcat gggagcgatg ctcgatgccg
     7141 acgacgcgct aagccgccac gaatggttga tcgcaccgtt attattgcag ggcagcgcct
     7201 cgccggatgc gcggatttta ctggcgctgc cggtcgatat tgatgagtta gtacaacgct
     7261 gcccgcagct ggtacagcag tctgacactg tggagtggga tgacgcgcaa ggtacgctga
     7321 aagcctggcg tcggctgcaa atcggtctgc tgacggtgaa agtgcagccg ctggcgaaac
     7381 cctcggaaga cgagttgcat caggcgatgc ttaatggcat ccgtgataaa ggtttaagcg
     7441 tgctcaactg gacggcggaa gcggaacagc tacgcttgcg tttgttatgc gccgcaaagt
     7501 ggttgccgga atatgactgg ccagcggttg atgatgaaag tttattggcg acgctggaaa
     7561 cgtggctgct gccacatatg actggcgtac attcactacg cggcctgaaa tcactcgaca
     7621 tttatcaggc actacgcgga ttacttgatt ggggaatgca gcaacgtctg gatagtgaat
     7681 tgcctgcgca ttacactgtg ccgacgggaa gccggatcgc tattcgttat catgaagata
     7741 acccgcccgc gctggcggtg agaatgcaag agatgtttgg cgaggccacc aatccgacga
     7801 tcgcccaggg gcgcgtgccg ctggtgctgg agttgctttc acctgcccaa aggccattac
     7861 aaatcacacg agatttgagc gccttctgga aaggagcgta ccgtgaggtg caaaaagaga
     7921 tgaaagggcg ttatcccaaa catgtctggc cggacgaccc ggcaaatact gcaccgacgc
     7981 gacggacgaa aaagtattcg taaggttggt tttctccctc tccctgtggg agagggccgg
     8041 ggtgagggca tcagcgcgca cgttcaccct caccctaacc ctctccctca agggagaggg
     8101 gaccgatcga acacaaattt tgagagatat cttcttctgt cttgtaacag aagaacagaa
     8161 aatcgggctt ttgcgcctga atattgcgga gaaaaagcat ggccgggaat gaccgcgagc
     8221 caattggacg caaagggaaa ccgacgcgtc cggtcaaaca aaaggtaagc cgtcgtcgtt
     8281 acgaagatga cgatgattac gacgattatg atgactatga ggatgaagaa ccgatgccgc
     8341 gcaaaggtaa gggcaaaggc aaagggcgta agcctcgtgg caaacgcggc tggctatggc
     8401 tactgctaaa actggctatc gtttttgccg tgctgatcgc catttacggc gtttatctcg
     8461 atcaaaaaat tcgtagccgt attgatggca aggtctggca actgcctgcg gcagtttatg
     8521 gccgaatggt caatcttgag ccagatatga ccatcagcaa gaacgagatg gtgaagctgc
     8581 tggaggcgac tcagtatcgt caggtgtcga aaatgacccg tcctggcgaa tttaccgtgc
     8641 aggccaacag cattgagatg atccgccgtc cgtttgattt cccggacagt aaagaagggc
     8701 aggtgcgtgc gcgtctgacc tttgatggtg atcatctggc gaccatcgtc aatatggaga
     8761 acaaccgtca gttcggcttt ttccgtcttg atccgcgtct gatcaccatg atctcctcgc
     8821 caaacggtga gcaacgtctg tttgtgccgc gcagtggttt ccctgatttg ctggtggata
     8881 ctttgctggc gacagaagac cgccatttct acgagcatga tgggatcagc ctctactcaa
     8941 ttgggcgtgc ggtgctggca aacctgaccg caggtcgcac ggtgcagggt gcgagtacgc
     9001 tgacgcaaca gctggtgaaa aacctgttcc tctccagcga gcgctcttac tggcgtaaag
     9061 cgaacgaagc ctacatggcg ctgatcatgg acgcgcgtta cagcaaagac cgtattcttg
     9121 agctgtatat gaacgaggtg tatctcggtc agagcggcga caacgaaatc cgcggcttcc
     9181 cgctggcaag cttgtattac tttggtcgcc cggtagaaga gctaagcctc gaccagcagg
     9241 cgctgttagt cggtatggtg aaaggggcgt ccatctacaa cccgtggcgt aacccgaaac
     9301 tggcgctgga gcgacgtaat ctggtgctgc gtctgctgca acagcaacag attattgatc
     9361 aagaactcta tgacatgttg agtgcccgtc cgctgggggt tcagccgcgc ggtggggtga
     9421 tctctcctca gccagccttt atgcaactgg tgcgtcagga gctgcaggca aaactgggcg
     9481 ataaggtaaa agatctctcc ggcgtgaaga tcttcactac ctttgactcg gtggcccagg
     9541 acgcggcaga aaaagccgcc gtggaaggca ttccggcact gaagaaacag cgtaagttga
     9601 gcgatcttga aactgcgatt gtgatcgtcg accgctttag tggtgaagtt cgtgcgatgg
     9661 tgggaggttc tgagccgcag tttgcgggct acaaccgtgc gatgcaggcg cgtcgttcga
     9721 ttggttccct tgcaaaacca gcgacttatc tgacggcttt aagccagccg aaaatctatc
     9781 gcctgaacac gtggattgcc gatgcgccaa tcgcgctgcg tcagccgaat ggccaggtct
     9841 ggtcaccgca gaacgatgac cgtcgttata gcgaaagcgg cagagtgatg ctggtggatg
     9901 cgttgacccg ttcgatgaac gtgccgacgg taaatctggg gatggcgctg gggctgcctg
     9961 cagttacgga tacctggatc aaactgggcg taccgaaaga tcagctgcat ccggttccgg
    10021 cgatgctgct gggggcgttg aacttaacgc caatcgaagt ggcgcaggcg ttccagacca
    10081 tcgccagcgg tggtaaccgt gcaccgcttt ctgcactgcg ttcggtaatc gcggaagatg
    10141 gcaaggtgct gtatcagagc ttcccgcagg cagaacgcgc tgttccggcg caggcggcgt
    10201 atctgacact atggaccatg cagcaggtgg tacaacgtgg tacgggtcgt cagcttgggg
    10261 cgaaataccc gaacctgcat ctggcaggga aaacagggac taccaacaat aacgtagata
    10321 cttggtttgc aggcattgac ggcagcacgg tgaccatcac ctgggtaggc cgtgataaca
    10381 accagccgac caaactgtat ggagccagcg gggcaatgtc gatttatcag cgttatctgg
    10441 ctaaccagac gccaacgccg ctgaatcttg ttccgccaga agatattgca gatatgggcg
    10501 tggactacga cggcaacttt gtttgcagcg gtggcatgcg tgtcttgccg gtctggacca
    10561 gcgatccgca atcgctgtgc cagcagagcg agatgcagca gcagccgtca ggcaatccgt
    10621 ttgatcagtc ttctcagccg caacagcaac ctgctcagca agagcagaaa gacagcgacg
    10681 gtgtagccgg ttggatcaag gatatgtttg gtagtaatta acatctaagc gtgaaatacc
    10741 ggatggcgag ttgccatccg gtaaaataac atcccatcta agatattaac cctttctttt
    10801 catctggttg tttattaacc cttcaggaac gctcagattg cgtaccgctt gcgaacccgc
    10861 cagcgtttcg aatattatct tatctttata ataatcattc tcgtttacgt tatcattcac
    10921 tttacatcag agatatacca atggcgcgtt ccaaaactgc tcagccaaaa cactcactgc
    10981 gtaaaatcgc agttgtagta gccacagcgg ttagcggcat gtctgtttat gcacaggcag
    11041 cggttgaacc gaaagaagac actatcaccg ttaccgctgc acctgcgccg caagaaagcc
    11101 catgggggcc tgctgcaact attgcggcga agcactctgc tactgcgact aaaacggata
    11161 caccaattga aaaaacgccg cagtctattt cggttgtgac aaatgaagag atgcagatgc
    11221 atcaatttca gtctgtaaaa gaagcattag gttatacacc tggcgttacg gttagcagtc
    11281 gtggtgcttc taatacatat gattttgtta tcattcgtgg tttctcatct gttggtctga
    11341 atcaaaataa ttaccttgat ggactaaaac ttcagggcaa cttttataac gatgctgtga
    11401 ttgatcctta catgctcgag agggttgaac tgatgcgtgg gccgacgtct gttctctatg
    11461 gaaaaagtaa tcctggtggg attatttcta tggtgagtaa gcgtccgacc actgaacccc
    11521 tgaaagaaat tcagtttaaa atggggacgg ataatctgtt tcagaccgga ttcgatttca
    11581 gtgatgcact ggatgataac ggtgagttct cttaccgttt gacgggcctc gctcgctcaa
    11641 caaacgaaca gcagaaaaac tctgaatctc agcgttatac cattgctcca tcattctcat
    11701 ggcgtccaga cgacaaaacc aattttactt tcctgtccta tttccagaat gaaccagaaa
    11761 cgggttatta cggttggttg ccgaaagagg ggaccgttga gccattgcct aatggtaagc
    11821 gtctaccgac tgacttcaat gaaggtgcat cgaataatac atactcccgt aaccagaaaa
    11881 tggtgggata tagttttgaa catggtttta atgacacctt caccgtgcgt cagaatctgc
    11941 gtttcagtga aatgaaaacc tcacagaaaa gtgtttatgg cacagggatt gctggtgatg
    12001 gtcataccct aaaccgcggg acagtggtgg ataatgagcg tctacaaaac tttagcgttg
    12061 atacccaact tgaaagtaag tttgctacag gtgacgtcga gcatactttg ctgacagggg
    12121 tagacttcat gcggatgcgt aatgatatca atgccagctt tggatccgca ccatccatcg
    12181 atctttataa caaatatcac cctgaatact ttgcatttgg tagcgcagag ccataccaga
    12241 tgaatgaaag caaacaaaca ggtatttatg ttcaggatca ggctgaatgg aataaatggg
    12301 tattcactct ggggggacgc tacgattggt ctaagcaagc gaccactgtt cgtgaaaact
    12361 cttatacgcc gactgaaggt tatattgagc gcaatgatca tcagttcacc tggcgcggtg
    12421 gtgtaaatta cttattcgat aatggtattt caccttactt tagctatagc cagtcctttg
    12481 aaccgagtgc tttcgatctg tggagcaacc cacgcatttc ctataagcca tcgaaaggtg
    12541 aacagtatga agctggcgta aaatatgttc cgaatgatat gccggtcgtt gttacgggcg
    12601 cagtctatca attgacgaaa acaaataacc tgacagcaga cccaacaaac ccattagcgc
    12661 aagtcccagc aggtgagatt cgcgctcgtg gtgtggaact tgaagcaaaa gcggcgttaa
    12721 atgccaatat taacttgacg gcttcttata cctacaccga tgcggaatac accaaagaca
    12781 ccaatctcaa aggtaaaact ccagaacaag taccggagca tatggcatct ctctgggggg
    12841 attatacctt caatgaaggg ccgctttctg gtttaacatt gggaacaggt ggtcgtttta
    12901 ttggttccag ctatggtgat ccggcaaaca cttttaaagt gggtagcgca gctgtaatgg
    12961 atgctgttgt aaaatatgat ctggcacgct ttggtatggc gggatccagc cttgctgtga
    13021 acgtcaacaa tttgctcgat cgtgagtatg ttgccagttg cttccagact tatggctgct
    13081 tctggggcgc agaacgtcag gtcgttgcaa ccgcaacctt ccgtttctaa tttctctttt
    13141 ggggcacgga tttccgtgcc catttcacaa gttggctgtt atgcaggaat acacgaatca
    13201 ttccgatacc acttttgcac tgcgtaatat ctcctttcgt gtgcccgggc gcacgctttt
    13261 gcatccgctg tcgttaacct ttcctgccgg gaaagtgacc ggtctgattg gtcacaacgg
    13321 ttctggtaaa tccactctgc tcaaaatgct tggccgtcat cagcctccgt cagaagggga
    13381 gattcttctt gatgcccagc cgctggaaag ctggagcagc aaagcgtttg cccgcaaagt
    13441 ggcttatttg ccgcagcagc ttcctccggc agaagggatg accgtgcgtg aactggtggc
    13501 gattggtcgt tacccgtggc atggcgcgct ggggcgcttt ggggcggcag atcgcgaaaa
    13561 agtcgaggaa gctatctcgc tggttggctt aaaaccgctg gcgcatcggc tggttgatag
    13621 tctctctggc ggcgaacgtc agcgggcgtg gatcgccatg ctggtggcgc aggatagccg
    13681 ttgtctgttg ctcgacgaac cgacctcggc gctggatatc gcccaccagg ttgatgtgct
    13741 ggcgctggtg caccgtttaa gtcaggagcg tggcctgacg gtcattgccg tgttgcacga
    13801 tatcaatatg gcggcacgct actgtgatta tctggtcgcc ctgcgcggtg gtgaaatgat
    13861 tgctcaggga acgcctgcgg aaattatgcg cggcgatacc ctcgaaatga tttatggcat
    13921 cccgatgggt attttgccgc atccggcggg tgctgcacct gtgagttttg tttattgatg
    13981 agcggcttac ctcttatttc gcgccgtcga ctgttaacgg cgatggcgct ttctccgttg
    14041 ttatggcaga tgaataccgc ccacgcggcg gctattgatc ccaatcgtat tgtggcgctg
    14101 gagtggttgc cggtggaatt actgctggcg ctcggcatcg tgccttacgg cgtggcggat
    14161 accatcaact atcgcctgtg ggtcagcgaa ccaccattgc cggactcagt gatcgacgtc
    14221 ggtttgcgca cagaacctaa ccttgaactg ctgaccgaaa tgaaaccgtc gtttatggtc
    14281 tggtcggcag gatatggccc ttcagcagaa atgctggcac gtattgcgcc ggggcgtgga
    14341 tttaacttca gcgacggcaa acagccgctg gcgatggcgc gtaaatcact gacggaaatg
    14401 gcagatttac ttaacctgca aagcgcagca gaaacgcatt tagcgcaata tgaagacttt
    14461 atccgcagca tgaaaccccg ctttgtgaag cgtggtgcac gcccgttatt gctgacgacg
    14521 cttatcgatc cgcgccatat gttggtcttc ggtccaaaca gcttgttcca ggaaattctt
    14581 gatgagtacg gcatcccaaa tgcctggcaa ggggaaacca acttctgggg cagtaccgcc
    14641 gtcagtatcg atcgtctggc agcgtataaa gacgttgatg tgctctgttt tgatcacgac
    14701 aacagcaaag acatggatgc gctaatggca accccgctgt ggcaggccat gccgtttgtc
    14761 cgcgctggac gctttcagcg cgtacccgca gtctggtttt atggtgcgac gctctcggca
    14821 atgcactttg tgcgcgttct ggataacgcc atcggaggta aagcgtgagt aaacgaattg
    14881 cgcttttccc ggcgttattg ctggcgctgc tggtgattgt cgctacggcg ctgacctgga
    14941 tgaacttttc gcaggcgctg ccgcgtagcc agtgggcgca ggccgcctgg tcgccggata
    15001 ttgacgtcat cgagcagatg atttttcact acagcttgct gccgcgtctg gctatttcgc
    15061 tgctggtggg cgcaggcctg gggctggtgg gcgtgctgtt tcagcaagtg ctgcgtaatc
    15121 cgctggcgga accgacgaca cttggcgttg ctacaggcgc gcaactgggg attaccgtca
    15181 ctacgctctg ggcgatccca ggggcgatgg cgagtcagtt tgctgcgctg gcgggcgctt
    15241 gcgttgttgg cttaattgtc tttggcgtcg cgtgggggaa acggctttcg ccggtaacgc
    15301 tgatcctcgc ggggctggta gtgagccttt attgtggggc aatcaatcag ttactggtta
    15361 tcttccacca tgaccaactg caaagcatgt tcctgtggag caccggaacg ctgacgcaaa
    15421 ccgactgggg cggtgttgag cgtttatggc cgcagttgct gggcggtgtg atgctgacgt
    15481 tgctgctact tcgcccgtta accctgatgg ggcttgatga tggcgtggcg cgcaatctcg
    15541 ggctggcctt gtcgctcgcg cgtctggcgg cgctgtcgct ggcgattgtc atcagtgcgc
    15601 tgctggtgaa cgcggtgggg attatcggct ttatcgggtt gtttgcgccg ttgctggcaa
    15661 aaatgctggg gtcgcggcgt ctgctgccgc gactgatgct ggcgtcgttg attggtgcgc
    15721 tgatcctctg gctttccgat caaatcatcc tctggctgac tcgcgtgtgg atggaagtgt
    15781 ccaccggttc ggtcactgcg ttgatcggtg cgccgctgct actgtggctg ttgccgcgtt
    15841 tacgcagcat tagcgcgccg gatatgaagg tcaacgatcg tgtcgcggct gaacgccaac
    15901 atgtgctggc gtttgccctc gcgggcggcg tgctgctgtt gatggctgtg gtggtggcgc
    15961 tgtcgtttgg tcgtgatgcg cacggctgga tgtgggcgag cggggcgttg ctcgatgatt
    16021 taatgccctg gcgctggccg cgaattatag cggcgctatt tgcgggcgtc atgctggcgg
    16081 tggcgggctg tattattcag cgactgaccg gcaacccgat ggcaagcccg gaagtgctgg
    16141 ggattagctc cggcgcagcg tttggcgtgg tactgatgct gtttctggta ccgggtaatg
    16201 cttttggctg gctgttaccc gcgggaagta tcggtgccgc ggtgacgctg ttgattatta
    16261 tgatcgccgc cgggcgcggt ggattttccc cacaccgcat gttactggcg gggatggcgt
    16321 taagtaccgc attcaccatg cttttaatga tgttgcaggc gagtggtgac ccgcgaatgg
    16381 cgcaagtgct cacctggatc tctggttcga cctacaacgc caccgatgcg caggtctggc
    16441 gtaccggaat tgtgatggtg attttgctgg cgattacccc gctgtaccgc cgctggctga
    16501 ccattttacc tctgggcggt gataccgcac gagctgtggg aatggcgctg acgccgacgc
    16561 gaattgcgct gctgctgtta gcggcttgcc tgacggcgac cgcgacgatg actattggac
    16621 cgttgagttt tgttggttta atggcaccgc atattgcgcg gatgatgggt tttcgacgga
    16681 cgatgccaca catcgtaatt tcggcgctgg tgggtggttt actgctggta ttcgctgact
    16741 ggtgtgggcg gatggtgctg tttccattcc agatcccggc ggggctgctg tcgaccttta
    16801 tcggcgcgcc atattttatc tatttgttga gaaagcagag ccgttaattg agtgcctcgc
    16861 ccggtgggcg aggcaaaatt atcacaactt cgcaaatacc cgacgtgcag catcgatggt
    16921 gttattgata tcttccatgc tgtgcgccac agacataaag cccgcttcaa acgctgacgg
    16981 tgccaggtaa acaccttcgt ccagcatcat atggaagaaa cgcttaaagc gttccacgtc
    17041 acaggccatc acatcctgat agcacgtcac ggactcggcg tcggtaaaga aaataccgaa
    17101 catgccgcca acgtggttaa cgaccagcgg agttccggct tcttctgccg cttccagcag
    17161 accttctgcc agacgtgttg tcagctcatc cagcgtttcg tgaacgcccg gctgcgcgac
    17221 ttcattcaga caggcgaaac ccgctgccat cgcaatcggg ttaccggaaa gcgtacccgc
    17281 ctgatagacc ggacccgtcg gggccagcgc atccattaca tcacgacgac caccgaatgc
    17341 gcctaccggc attccaccgc cgatgatttt gccgaggcag gttaaatctg gcactacgcc
    17401 gtaataatcc tgtgcgccag ccagtgccac gcggaagccg gtcatcactt catcgatgat
    17461 cagcaacgtg ccaaattcgt cgcacagcgc acgcagacct ggcaggaact ctggctgcgg
    17521 cggaacacag ttcatattgc ctgccaccgg ctcgacgata atacaggcaa tctcttgcgg
    17581 gtattgctca aacgcggcgc gtacagaagc cagatcgtta taagtacagg ttaaggtatg
    17641 tttggcgaaa tctgccggaa cacccggcga gtttggctgg cctaacgtga gtgcgccaga
    17701 accggctttc accagcaggc agtcagcgtg accgtggtaa caaccttcaa atttaatgat
    17761 tttgtcgcga ccggtaaaac cacgggccag gcggatggcg ctcatggtcg cttcagtgcc
    17821 ggagttcacc atgcgtacca tatccatggt cgggaccagt tcggtcacca gttgcgccat
    17881 tttcacttcc atttcggtcg gtgcaccaaa gcttaaacca cgctcggcgg cttcaatcac
    17941 ggcattgcgg atagccggat ggttatggcc cagcaccatc ggcccccagg aaccgacata
    18001 atcgatatag gctttgccat caacatcgta cagataagcg ccgtccgctt tttcgataaa
    18061 cagtggagtg ccgcccacgc cagtaaaggc gcgaacaggg gagttcacac cgccagggag
    18121 cagctcgcgc gctgcgctgt aaagattttc agacttactc atggagggtt cctgattcgt
    18181 agaaaaagtg aatggctgct attctatgtt attcataaca agttaaatac tcgtcaaaca
    18241 tcaggctgct tgtactggtg caatcctgat ttcttagagt ataaaagttt tgtgcatttg
    18301 aaacattacg ctttgcaaag gattttcatg gaacgcgcga gtaaaatgcc gtcatcttat
    18361 ttgtatgacc aataagtgat cattggatga aaactgatac tccctcttta gaaacaccgc
    18421 aggccgcgcg cctacgacgc agacaactga ttcgccaact tcttgagcgc gataaaaccc
    18481 cgttagccat tttgtttatg gcggcagtcg tcggcacgct tgtcgggctg gcagcggttg
    18541 cttttgacaa aggtgtcgcc tggttgcaga accaacgtat gggggcgctg gtacatactg
    18601 ctgataatta tccgcttctg ttaaccgtcg cttttctctg ttcggcggtg ctggcgatgt
    18661 tcggctactt tttggtgcgc aaatacgcgc cggaagcagg tggttcgggg atcccggaaa
    18721 ttgaaggggc gctggaagat caacgtcccg ttcgctggtg gcgtgtgttg ccggtgaaat
    18781 tctttggcgg gctggggaca ctcggcggag gcatggtgct ggggcgcgaa gggccaaccg
    18841 tgcagatcgg cggcaatatc ggtcgcatgg tactcgatat tttccgcctg aaaggtgatg
    18901 aagctcgcca tacgctgctg gcaaccggtg ctgctgcggg gctggctgcg gcctttaacg
    18961 cgccgctggc gggtattttg tttattatcg aagagatgcg tccgcagttt cgctatacgt
    19021 taatttcgat taaagcggta tttattggcg tcattatgtc gaccattatg taccggattt
    19081 ttaatcatga agttgcgttg attgacgtcg gtaaactttc tgatgcgccg cttaatacgc
    19141 agtggcttta tctgatcctc ggtattattt ttggcatttt cggccctatt tttaataaat
    19201 gggtgctggg gatgcaggat ttgctgcacc gtgtgcacgg cggcaatatt accaaatggg
    19261 tgctaatggg cggtgcgatt ggcggtctgt gtggattgct ggggtttgtg gcaccagcaa
    19321 cgtcgggcgg cggttttaac ctgattccta tcgctaccgc agggaatttc agcatgggaa
    19381 tgctggtgtt tatcttcgtc gcgcgggtca ttaccacctt actgtgcttc tcttccggcg
    19441 cgccgggcgg tatttttgcc ccgatgctgg cgctgggtac tgtgctggga accgctttcg
    19501 gaatggttgt cgttgagctg tttccgcaat atcaccttga ggcggggact tttgctattg
    19561 ccggaatggg ggcgttactg gcggcatcta ttcgcgcgcc gttaacgggg atcattttgg
    19621 ttctggagat gaccgataac taccagctca ttttgccaat gattattacc ggtcttggcg
    19681 caacactatt agcgcaattt accggcggga aaccgctata ttcggcgatt cttgcgcgca
    19741 cgctggcaaa acaggaagct gagcaactgg cgcgaagcaa ggccgcatca gccagcgaga
    19801 atacttgaac gaaataccag ggtattagat aatggcgatt attattgggt tagaatttgc
    19861 ccaattgccg atgtcgtttg gagcaaaata tgagtgatga cgtagcactg ccgctggagt
    19921 ttaccgacgc agcagccaac aaagttaaaa gcctgatcgc tgacgaagat aacccgaatc
    19981 tgaaattacg cgtgtatatc accggtggcg gttgcagcgg cttccagtat ggtttcacct
    20041 ttgatgatca ggtgaacgaa ggcgatatga ccatcgaaaa acagggcgtt ggcctggtgg
    20101 ttgatccgat gagcctgcaa tatctggtcg gtggttccgt tgactatacc gaaggactgg
    20161 aaggttctcg tttcatcgtg accaacccga acgcgaaaag cacctgcggt tgcggttctt
    20221 cctttagcat ctaatctgtt gttcatgtgc cggataaact atccggcaca tcttctctct
    20281 tcaacgccca ttctcatcca gcgcaaacgt cggtagctta agatgccaac gaatagccgc
    20341 cagccgaatc aatagcgtca cgaccatgcc catcatactg gctgtttcca gtggtacgga
    20401 aaatgtgtaa taagccgtag cgtggacaat accgccgata atacaggcag ttgcgtagat
    20461 ttctgtacgt aaaatcatgg ggatttcgcg ggccagtaca tcacgaatga tcccgccgcc
    20521 aacgccagta atgacgccca tacaaaccgc gattaacgga ccggcttccg cattaaaggc
    20581 tttattcacg ccaatgccga caaacaccgc cagaccaacg gcgtccagca ccggcaacat
    20641 ccattttggt aagcgtcttg gctggcgcac cagcacgatg gtcagcatgc tggttaccat
    20701 tgcaacgacc agatcggtgg gatctttcac ccaaaatacc gggccgtgat ccagcgccat
    20761 gtcgcgaatt gtcccgccgc ctacagcggt aaccacgccc agcaccagaa caccaaaagg
    20821 gtccatacgc aattttccgg ctaacaaaac gccggagatg gcaaataccg ctgtgccgac
    20881 tatatccagc caatagacga gcattgttca atccccactg agcacctaaa aaggtcaggc
    20941 gctaatctac ctgtgaaagc gcattacaga gctgttgtgc agcgaggata atacgtgggc
    21001 ttgcacgtca aaccagtcac tcgtgagagg aataacggga attttgagct gttcacccca
    21061 gtattgtttg attttaggaa tttggtccgg tccgcctgta atgacaatcg cctgtggcga
    21121 gcgtgctaac acctgttcgc ggctaacttg cggccaagga acccggctgt ctttaaagat
    21181 gttttctccg ccacaaactt cgagtacctg gttttgaatc gactcttttc cactggtaaa
    21241 tggcggatta atgccgaatt gcagaaaaac acgtttttta ggtttaccag catattgcgc
    21301 tttcaattgc gcgtactgat ccagcaggga ttgcgcggct tgttcggcct tatccggttg
    21361 cggactccag ggggccagtt gacgtaacgc attggcaatt tgttcaatgc ttgtcgcatc
    21421 gacccacatc acttttattc ccagcgaagc cagctggtca acctgccgct cggcattacc
    21481 tccacgccag gcaatcacca gatcgggttt cagcgcgaca atgcgttcca gattcatccc
    21541 ctgccaggtg gaaacctgct caatcttttg cgcttgtgga ggatagtcgg aatagctgct
    21601 gaccccaacc ggcgtgatcc cggcggcaaa ggcaagttca gtgttggcgg gagaaagcgt
    21661 gatgacgcgc ggtgccgcgt tgagccacag tggcgcgaga aaagacaggg cgaccagcgc
    21721 cctgaacagt gacttagcca tgtgccagtt tctgcaccag tgactcaacc atcaggctgg
    21781 actgtttagc ggcaacagcc aggaactcat cgaagctaag atgagactgt tgatcggcca
    21841 cgtcggagat ggcgcgtacg acaacaaacg ggacgttgaa attgtggcag acatgggcga
    21901 ttgccgtcgc ttccatctct acagcaatgg cctgtgggaa gttgtggcgg attttcgcca
    21961 gaccaacaga accgttgatg aaagcgtcgc cgctaacaat caggccacgt acagcgttaa
    22021 gattcagttc ggcaatgcag gcctcagcgg cagcgatcag tttatcgtca gctttaaagc
    22081 ctgccggaca gcctggtaac tgaccgtatt cataaccaaa tgccgtgaca tccgcgtcgt
    22141 gataacgtgc ttcgtccgag acaacgatat cgcccacttt caacgttggt gccaggccac
    22201 cggcagaacc ggtgttaata atcacatctg gcttgcagtg ttccaacagc aaagtggcac
    22261 ccagcgccgc agcgacttta ccgatgcccg atttcagaag cgcaacctcg gttccattca
    22321 gttggccggt atagatttcg caaccgccga gactgatagt ttgacgattt tcgattttgt
    22381 cacgcagcag cgtaacttct tcttccattg caccaatgat gccgattttc atagatttac
    22441 tcgcgataag cccgatttga aggcatagtt taccatgcgc ttacggggaa gcgtgggaga
    22501 ggacatggca cagattgatt tccgaaaaaa aataaactgg catcgtcgtt accgttcacc
    22561 gcagggcgtt aaaaccgaac atgagatcct gcggatcttc gagagcgatc gcgggcgtat
    22621 catcaactct ccggcaattc gtcgtctgca acaaaagacc caggtttttc cactggagcg
    22681 caatgccgcc gtgcgcacgc gtcttaccca ctcgatggaa gtccagcagg tggggcgcta
    22741 catcgccaaa gaaattctaa gccgtatgaa agagcttaaa ttactggaag catacggcct
    22801 ggatgaactg accggcccct ttgaaagcat tgttgagatg tcatgcctga tgcacgatat
    22861 cggcaatccg ccgtttggtc attttggcga agcggcgata aatgattggt ttcgccagcg
    22921 tttgcacccg gaagatgccg aaagccagcc tctgactgac gatcgctgca gcgtggcggc
    22981 actacgttta cgggacgggg aagaaccgct taacgagctg cggcgcaaga ttcgtcagga
    23041 cttatgtcat tttgagggga atgcacaagg cattcgtctg gtgcatacat tgatgaggat
    23101 gaatctcacc tgggcacagg ttggcggtat tttaaaatat acccgtccgg cgtggtggcg
    23161 tggcgaaacg cctgagacac atcactattt aatgaaaaag ccgggttatt atctttctga
    23221 agaagcctat attgcccggt tgcgtaaaga acttaatttg gcgctttaca gtcgttttcc
    23281 attaacgtgg attatggaag cagccgacga catctcctat tgtgtggcag accttgaaga
    23341 tgcggtagag aaaagaatat ttaccgttga gcagctttat catcatttgc acgaagcgtg
    23401 gggccagcat gagaaaggtt cgctcttttc gctggtggtt gaaaatgcct gggaaaaatc
    23461 acgctcaaat agtttaagcc gcagtacgga agatcagttt tttatgtatt tacgggtaaa
    23521 caccctaaat aaactggtac cctatgcggc acaacgattt attgataatc tgcctgcgat
    23581 tttcgccgga acgtttaatc atgcattatt ggaagatgcc agcgaatgca gcgatcttct
    23641 taagctatat aaaaatgtcg ctgtaaaaca tgtgtttagc catccagatg tcgagcagct
    23701 tgaattgcag ggctatcggg tcattagcgg attattagag atttatcgtc ctttattaag
    23761 cctgtcgtta tccgacttta ctgaactggt agaaaaagaa cgggtgaaac gtttccctat
    23821 tgaatcgcgc ttattccaca aactctcgac gcgccatcgg ctggcctatg tcgaggctgt
    23881 cagtaaatta ccgtcagatt atcctgagtt tccgctatgg gaatattatt accgttgccg
    23941 cctgctgcag gattatatca gcggtatgac cgacctctat gcgtgggatg aataccgacg
    24001 tctgatggcc gtagaacaat aaccaggctt ttgtaaagac gaacaataaa tttttacctt
    24061 ttgcagaaac tttagttcgg aacttcgcgc tataaaacga atctgaagaa cacagcaatt
    24121 ttgcgttatc tgttaatcga gactgaaata catgaaaaaa accacattag cactgagtgc
    24181 actggctctg agtttaggtt tggcgttatc tccgctctct gcaacggcgg ctgagacttc
    24241 ttcagcaacg acagcccagc agatgccaag ccttgcaccg atgctcgaaa aggtgatgcc
    24301 ttcagtggtc agcattaacg tagaaggtag cacaaccgtt aatacgccgc gtatgccgcg
    24361 taatttccag cagttcttcg gtgatgattc tccgttctgc caggaaggtt ctccgttcca
    24421 gagctctccg ttctgccagg gtggccaggg cggtaatggt ggcggccagc aacagaaatt
    24481 catggcgctg ggttccggcg tcatcattga tgccgataaa ggctatgtcg tcaccaacaa
    24541 ccacgttgtt gataacgcga cggtgattaa agtccagctg agcgatggcc gtaagttcga
    24601 cgcgaagatg gtcggcaaag atccgcgctc tgatatcgcg ctgatccaaa tccagaaccc
    24661 gaaaaacctg accgcaatta agatggcgga ttctgatgca ctgcgcgtgg gtgattacac
    24721 cgtagcgatt ggtaacccgt ttggtctggg cgagacggta acttccggga ttgtctctgc
    24781 gctggggcgt agcggcctga atgctgaaaa ctacgaaaac ttcatccaga ccgatgcagc
    24841 gatcaaccgt ggtaactccg gtggtgcgct ggttaacctg aacggcgaac tgatcggtat
    24901 caacaccgcg atcctcgcac cggacggcgg caacatcggt atcggttttg caatcccgag
    24961 caacatggtg aaaaacctga cctcgcagat ggtggaatac ggccaggtga aacgcggtga
    25021 gctgggtatt atggggactg agctgaactc cgaactggcg aaagcgatga aagttgacgc
    25081 ccagcgcggt gctttcgtaa gccaggttct gcctaattcc tccgctgcaa aagcgggcat
    25141 taaagcgggt gatgtgatca cctcactgaa cggtaagccg atcagcagct ttgccgcact
    25201 gcgtgctcag gtgggtacta tgccggtggg cagcaaactg accctgggct tactgcgcga
    25261 cggtaagcag gttaacgtga acctggaact gcagcagagc agccagaatc aggttgattc
    25321 cagctccatc ttcaacggca ttgaaggcgc tgagatgagc aacaaaggca aagatcaggg
    25381 cgtggtagtg aacaacgtga aaacgggcac tccggctgcg cagatcggcc tgaagaaagg
    25441 tgatgtgatt attggcgcga accagcaggc agtgaaaaac atcgctgaac tgcgtaaagt
    25501 tctcgacagc aaaccgtctg tgctggcact gaacattcag cgcggcgaca gcaccatcta
    25561 cctgttaatg cagtaatctc actcaacccc ttcctgaaaa cgggaagggg ttctccttac
    25621 aatctgtgaa cttcaccaca actccataca tcttcatcat cctttaggca tttgcacaat
    25681 gccgtacgtt acgtacttcc ttatgctaag ccgtgcataa cggaggactt atggctggca
    25741 tcttgatacc aaaatggcgc aggatatcgt ggcacgtacc atgcgcatca tcgataccaa
    25801 tatcaacgta atggatgccc gtgggcgaat tatcggcagc ggcgatcgtg agcgtattgg
    25861 tgaattgcac gaaggtgcat tgctggtact ttcacaggga cgagtcgtcg atatcgatga
    25921 cgcggtggca cgtcatctgc acggtgtgcg gcaagggatt aatctaccgt tacggctgga
    25981 aggtgaaatt gtcggcgtaa ttggcctgac aggtgaacca gagaatctgc gtaaatatgg
    26041 cgaactggtc tgcatgacgg ctgaaatgat gctggaacag tcgcggttga tgcacttgtt
    26101 ggcgcaggat agccgtttgc gggaggaact ggtgatgaac ctgattcagg cagaggagaa
    26161 tactcccgca cttactgaat gggcgcaacg gctggggatc gatctcaatc aaccgcgagt
    26221 ggtggctatt gttgaggtcg acagcggtca gcttggtgtg gacagcgcaa tggcggagtt
    26281 acaacaactg caaaacgcgc tgactacgcc cgagcgtaat aatctggtgg cgattgtctc
    26341 gctaaccgaa atggtggtgt tgaaaccggc gttgaactct tttgggcgct gggatgcaga
    26401 agatcatcgt aagcgagttg aacaactgat tacccgcatg aaagagtacg gccagctgcg
    26461 ttttcgcgtt tcactgggca actattttac cggtcctggc agtattgccc gatcctatcg
    26521 tacggcgaaa acgacgatgg tggtgggtaa acagcggatg ccagaaagtc gctgctattt
    26581 ttatcaggat ctgatgttac ctgtgttact cgacagtttg cgtggcgact ggcaggccaa
    26641 cgaactggcg cgaccgctgg cgcggctgaa agcgatggac aataacggct tgctgcgacg
    26701 aacgctggcg gcgtggtttc gtcacaatgt gcaaccgctg gcaacgtcaa aggcgttgtt
    26761 tattcatcgt aataccctgg agtatcggct taattgtata tcggaactga ccgggcttga
    26821 tttgggcaat tttgatgaca ggttgctgct gtatgtggcg ttacaactgg atgaagagcg
    26881 gtaggttatg cgttaaggtt gaggcggcgc tgtctcattc ccctcagccc gaaggggaga
    26941 ggggaatgcc cgaattaacc gtcaattcgg gattatttac gcgttagttt ttccagatcg
    27001 gcttcaatct cgctgatctt attggttacg actgactcca ggtgacgtaa gtcgtcgagg
    27061 atcttacgct taagatcaac ttcgctgcgg tcacgctggc agatttgatc aagctcatca
    27121 atgatatacc gtagattcgg gctgatttcc tggacttctt tataaccctg acccacacca
    27181 tcagcgacga ccgttttacg ctgacgcgga tatttaaact taacgctctt ggcgaaaaac
    27241 tcgcctttgt ctttctggaa atagattttc agaatatcgt tgttggcttc ctgccggagg
    27301 ctgtaacgat caatttcttc aggattggta atacccagac ttttcagatt gtcgtacata
    27361 gcgttacctc aaaatgagtc agtaaattgt gcttatttta gcatttggcc tggcccgccc
    27421 ggctcgactg tgatcgcaga aagccttttt cttccagact tctatcatgg cgtaaaaatc
    27481 aaaaaattac ctgctttatt gtggtgataa aattcacgtt ctacaccagt tccagcatcg
    27541 ttacttccgg gcggcagttc agacgcaaac catacaaact gcccacgcca cgggttgtgt
    27601 agatgtgtcg ttcgccaaag gcatttaatc cggcgacgta acgtttatct tcgacagggg
    27661 caaaaggttc accaaccaac ggtacgcgca gttgcccgcc gtgagtatgg ccgcacagca
    27721 tcagatccca gggttcatca cgcatgactt ctttgctgtc gggattatgt gccagcatca
    27781 gtcttggcag atttgcttcg ctggcgggag gtggtttgca ttgtccggcc cataagtcac
    27841 cggtgcctac cagttcgaat tgcctgttcg gcgtggcgat caccgtagcc tggttaaaca
    27901 acaccgtgat gcccactgat ttcaacgtct cgccaattaa gtgatttttt tctgtaccaa
    27961 cagggcgatc gtggttgccg aagcaggcaa acgtcggcgc acattcggca aggggggaga
    28021 ggacatcact aaacgccgaa aaattcagcg gcatatcaaa taatacgtaa tcgccgccca
    28081 gtaatatcaa atcgggcttt tgttctatgc caagagcaat cgcgtcagaa atcaggctta
    28141 aaggaacaaa acgagagtaa tggagatcgg ccagaaaaag aattttgaat ggtgctgcgt
    28201 tgtctttaaa aaaggcgagg cggtgacgga ttaattcaaa ccagcctggc tcccagtaat
    28261 gcatataacc gaaacctgag ctcgtggcta tcgtcgcggc agtagcctgc aacaatcggc
    28321 ggcgtgaaat catcgctcat ccctgcaaaa aaaatcgggc agcgtcgtgc tgcccgtgtg
    28381 catactttta gtcgatggta cgcagcagtt cgttaatgcc gactttgccg cgagttttcg
    28441 cgtcaacttt cttaacgata accgcacagt agaggctgta tttgccatct tttgacggca
    28501 gattacctga aacaaccaca gaccccgccg gaacgcgacc gtagtggatt tcgccggttt
    28561 cacggtcgta aatacgggtg ctctgaccaa tgtatacgcc catggaaatg acggaacctt
    28621 cttcgacaat caccccttca actacttcag agcgtgcgcc aatgaagcag ttatcttcaa
    28681 tgatggttgg gttagcctgc agcggttcca gcacgccgcc gatgcccacg ccaccggaaa
    28741 ggtggacgtt tttaccaatc tgcgcacaag aaccgacggt cgcccaggta tcaaccatgg
    28801 tgccttcatc aacatatgcg ccgatgttga cgtaagacgg catcagcacg gtgttacggg
    28861 caataaacgc accctgacgt accgccgctg gtggcacaac gcggaagcct tctttctgga
    28921 aacgtgcttc gtcgtagtcg gcgaatttca tcggcacttt gtcgaagtag cggctttctg
    28981 ccccttcgat cacctgatta tcattaatac ggaaagagag cagcaccgct tttttcaacc
    29041 actgatgcgt cacccactga ccgtcaattt tttccgctac acgcagtgca ccggaatcca
    29101 gcagggagat cacctgattt accgcttcgc gggtaacggt gtctgcgttg gctggcgtga
    29161 tctcggcacg gcgttcaaaa gcggtttcaa taatgttctg taactgctgc attgttaaac
    29221 tcttttcata tcagtaaaca catcaccctt tatcgtttgg attgagggcc tctgtcaacc
    29281 gctgatgcac ttcctgctgc aactcgttat taagcgcacg ccggtcagcg gtggcaatta
    29341 tgaataaatc ttctactcgc tcgccaatgg ttgtaattcg ggcaccatga agcgaaattc
    29401 ccagatcggc aaaaattttc ccgactctcg ccagcagtcc tggctggtcg agcgcgataa
    29461 gctcaaggaa cgatttgcgg tcggtatggg tcggcaaaaa cgttacttcg gtttcaacag
    29521 taaaatggcg taatttggcg ggttggcgac ggggctgcgg tggctgccag ctactttgcg
    29581 tcagtacttg ctccagacca aaccgaataa cctcatgacg atctgcggac agcgggctgc
    29641 catcgggttc cagcacgata aaggtatcca tcgccatacc gtcgcgagtg gtgaaaattt
    29701 gtgcgtcgtg aacacttaaa ttgcggcggt ctaattcggc acagacggcg gcaaacagat
    29761 aggggcggtc cgggctccag ataaaaatct cggtgcctcc acgcgtagcc tgcgggctaa
    29821 gcaataccag tggtttgctt aaatcatgct gtaataaatg gcgggcatgc caggccagtt
    29881 gatttgggct atggcggaca aaatagttag cacgacagcg tgaccaaatt tggtgcagcg
    29941 cctcttcgtc gatgttatcc atgcgcagta gtgccagtgc ctggagttgg tgatggcgaa
    30001 cccgttcgcg catatccggc gtgttttgca ttccgcgtcg tagctgcttt tcggtggcaa
    30061 aatagagttc gcgcaacaga ctttgcttcc agctattcca cagcgtttcg ttggtggcgc
    30121 aaatgtcagc cactgtcagg cataccagat agcgcagacg attttccgtt tgaacttctt
    30181 cggcaaactg cttgatgact tcagggtcct gaatatcgcg gcgttgtgct gtcaccgaca
    30241 tcagcaagtg ctggcgaacc agccaggcaa ccagctgtgt ttcgcgtgag ttcagcccgt
    30301 ggagttctgc aaaatgcact acatcctgag caccgagaat ggagtggtcg ccgccgcgtc
    30361 ctttggcgat atcgtgaaac agcgcggcga tgaaaatcag ctcagttgac ggcaggcgcg
    30421 gccagacgtc cacacacaac ggatggcgct ggcgcgtttc ttcactggca aaactctcca
    30481 gtttcagcat cacgcggata gtatgttcat ccaccgtgta ggcgtggaac agatcaaact
    30541 gcatctgccc gacgatatgc gaccattgcg gcatatacgc gccgagcacg ctatggcgat
    30601 gcattggcaa tagcccgcgc cgcaccgctc cggggtgacg cagaatgctc aaaaacagtt
    30661 ttcgtgcttc cggaatatta cacagcggtt gttgcagatg gcgacgggca tggcgtaact
    30721 ggcgcagcgt ggtggagtaa atgccggtga tcgcactgtt gcgcaccatg gtgtagaaca
    30781 tacgcaagat ggcttccggc tggcgcataa atagtgtttc atcacgcagg tcgattagcg
    30841 taccgcgtag ctgaaactca tcgtcgattg gacgtggttt ttcgtcggca ggaagggcga
    30901 ggatggcttc atcgaacagt tgcagcagca tctggttgag ttcactgacg cggcgtgtaa
    30961 cgcggaagta atccttcatc atccgctcga ccggttcgtt gccttcacca ctgtaattca
    31021 gacgctgagc gacgctaagt tggcgatcga ataacaggcg attatcgtaa cggctgacga
    31081 ccagatgcag ggcaaagcga atacgccaca gtatatgcag acattcgttt aattccgccc
    31141 gctccgctga ggttaagaag ccaaacccaa ccatttcatc cagcgatgtt gcgccaaaat
    31201 gacggcgggc cacccattgc agagtgtgga tatcgcgcaa gccgccaggg ctacttttga
    31261 tgtctggttc aagattgtag ctggtgccgt ggtaacgctg atggcgctgg ttctgttctt
    31321 caactttcgc cgcgtagaac ttgtcggaag gccagaatcc ttcgctaaaa atatgttttt
    31381 gcagttcgag gaagagcgca acatcgccaa ttaataagcg ggattcgatt aaattggtgg
    31441 cgacggttaa atccgataac ccttccagca tgcactcttc aagcgtgcgc acactatgac
    31501 cgacttccag ctttacatcc cagagcagcg ttaacagctc gcccactttt tgcgcctgat
    31561 cgtccgggag ctttttacgg cttaaaatca gtaaatcgat gtcagaaagt ggatgcagct
    31621 cgccacgacc gtagccaccg acggcgacca atgccaggtc ggcaatctgg ctgaatcccg
    31681 cttcaatcca taatcgttgc aggagctggt cgataaactc ggtgcgcgcc tcaatcaact
    31741 gttctgcaga gatcccattg tcaaaggcat cacccagcca acgctggaaa gtatctatat
    31801 gggcttttat cccaccgacg gttaattcat cacggggcca gacgcatgga ttttgcggtt
    31861 gaccgggcag ggtggggaga gcggtgtttg cgtactgttc tggaagggta ttcattgtgc
    31921 gccactcata agattaaatt atcgcattaa aaaagccggc attcgccggc ttcatcttat
    31981 tcgtcgtgcg agattatcgc cgggatggtg tcatccttgc gtagcgtcag aatttcgcag
    32041 ccgttatcag tcaccacaat agtatgctca tattgtgcag acaagctgcg atctttggtt
    32101 tttaccgtcc agccatcttt catggtgcgg atctcttttt tacccgcgtt gaccattggc
    32161 tcgatggtga acgtcatccc aggtttcagt acgacgttgg tttcacggga gtcatagtgc
    32221 agcacctgcg gttcttcatg gaagccgcga ccaataccgt gtccgcaata ttcacgaacg
    32281 acggagaagc cttctgcttc gacaaacttc tgaatcgccg caccgatttc gcgcaggtta
    32341 atgcctggtt tgaccatgcg cagcgccagg tacaggcttt cttgcgtgat gcggcacaga
    32401 cgttcgccca tgatggtcgg cttaccgacg ataaacattt tcgaggtatc gccgtggaaa
    32461 ccatctttga ttacggtgac atcaatgtta acgatatcgc catctttcag cagcttcgca
    32521 tcgtccggga taccgtggca caccacttca ttaatagaga tgcaaacgga tttcggatag
    32581 ccgtgatagc cgaggcaggc agaaaccgcg tgttgttcat taacaatgta atcattacag
    32641 atgcgatcca gctcgccggt gctgacgccc ggtttaacat acggttcgat catctccagc
    32701 acttcggcag ccagtcggcc agcgacgcgc attttttcga tatcttctgg ggtcttgatt
    32761 gagatagcca ttaattctgt ccatcagcgt cggtgatacc gacaatatat atgtaagtgc
    32821 cgtcaatggt atcacacccg ggcaaattga gaatcattct gaatttcgcc aaacgtgcca
    32881 ctgaacgttt tctataatag aaaattcaac gtctgatgct gtacacagcg ccaacaatta
    32941 ttggtgtcca tgacgtattt gtggtataaa gcgcgccgga cttccgatcc atttcgtata
    33001 cacagactgg acggaagcga caatctcact ttgtgtaaca acacacacgt atcggcacat
    33061 attccggggt gccctttggg gtcggtaata tgggatacgt ggaggcataa ccccaacttt
    33121 tatatagagg ttttaatcat ggcaactgtt tccatgcgcg acatgctcaa ggctggtgtt
    33181 cacttcggtc accagacccg ttactggaac ccgaaaatga agccgttcat cttcggtgcg
    33241 cgtaacaaag ttcacatcat caaccttgag aaaactgtac cgatgttcaa cgaagctctg
    33301 gctgaactga acaagattgc ttctcgcaaa ggtaaaatcc ttttcgttgg tactaaacgc
    33361 gctgcaagcg aagcggtgaa agacgctgct ctgagctgcg accagttctt cgtgaaccat
    33421 cgctggctgg gcggtatgct gactaactgg aaaaccgttc gtcagtccat caaacgtctg
    33481 aaagacctag aaactcagtc tcaggacggt actttcgaaa agctgaccaa gaaagaagcg
    33541 ctgatgcgca ctcgtgagct ggagaaactg gaaaacagcc tgggcggtat caaagacatg
    33601 ggcggtctgc cggacgctct gtttgtaatc gatgctgacc acgaacacat tgctatcaaa
    33661 gaagcaaaca acctgggtat tccggtattt gctatcgttg ataccaactc tgatccggac
    33721 ggtgttgact tcgttatccc gggtaacgac gacgcaatcc gtgctgtgac cctgtacctg
    33781 ggcgctgttg ctgcaaccgt acgtgaaggc cgttctcagg atctggcttc ccaggcggaa
    33841 gaaagcttcg tagaagctga gtaataaggc ttgataactc ccccaaaata gttcgagttg
    33901 cagaaaggcg gcaagctcga gaattcccgg gagcttacat cagtaagtga ccgggatgag
    33961 cgagcgaaga taacgcatct gcggcgcgaa atatgaaggg ggagagccct tatagaccag
    34021 gtagtacacg tttggttagg gggcctgcat atggccccct ttttcacttt tatatctgtg
    34081 cggtttaatg ccgggcagat cacatctccg aggattttag aatggctgaa attaccgcat
    34141 ccctggtaaa agagctgcgt gagcgtactg gcgcaggcat gatggattgc aaaaaagcac
    34201 tgactgaagc taacggcgac atcgagctgg caatcgaaaa catgcgtaag tccggtgcta
    34261 ttaaagcagc gaaaaaagca ggcaacgttg ctgctgacgg cgtgatcaaa accaaaatcg
    34321 acggcaacta cggcatcatt ctggaagtta actgccagac tgacttcgtt gcaaaagacg
    34381 ctggtttcca ggcgttcgca gacaaagttc tggacgcagc tgttgctggc aaaatcactg
    34441 acgttgaagt tctgaaagca cagttcgaag aagaacgtgt tgcgctggta gcgaaaattg
    34501 gtgaaaacat caacattcgc cgcgttgctg cgctggaagg cgacgttctg ggttcttatc
    34561 agcacggtgc gcgtatcggc gttctggttg ctgctaaagg cgctgacgaa gagctggtta
    34621 aacacatcgc tatgcacgtt gctgcaagca agccagaatt catcaaacca gaagacgtat
    34681 ccgctgaagt ggtagaaaaa gaataccagg tacagctgga tatcgcgatg cagtctggta
    34741 agccgaaaga aatcgcagag aaaatggttg aaggccgcat gaagaaattc accggcgaag
    34801 tttctctgac cggtcagccg ttcgttatgg aaccaagcaa aactgttggt cagctgctga
    34861 aagagcataa cgctgaagtg actggcttca tccgcttcga agtgggtgaa ggcatcgaga
    34921 aagttgagac tgactttgca gcagaagttg ctgcgatgtc caagcagtct taattatcaa
    34981 aaaggagccg cctgagggcg gcttcttttt gtgcccatct tgtaaattca gctaaccctt
    35041 gtggggctgc gctgaaaagc gacgtacaat gtcgctagta ttaattcatt tcaatcgttg
    35101 acagtctcag gaaagaaaca tggctaccaa tgcaaaaccc gtctataaac gcattctgct
    35161 taagttgagt ggcgaagctc tgcagggcac tgaaggcttc ggtattgatg caagcatact
    35221 ggatcgtatg gctcaggaaa tcaaagaact ggttgaactg ggtattcagg ttggtgtggt
    35281 gattggtggg ggtaacctgt tccgtggcgc tggtctggcg aaagcgggta tgaaccgcgt
    35341 tgtgggcgac cacatgggga tgctggcgac cgtaatgaac ggcctggcaa tgcgtgatgc
    35401 actgcaccgc gcctatgtga acgctcgtct gatgtccgct attccattga atggcgtgtg
    35461 cgacagctac agctgggcag aagctatcag cctgttgcgc aacaaccgtg tggtgatcct
    35521 ctccgccggt acaggtaacc cgttctttac caccgactca gcagcttgcc tgcgtggtat
    35581 cgaaattgaa gccgatgtgg tgctgaaagc aaccaaagtt gacggcgtgt ttaccgctga
    35641 tccggcgaaa gatccaaccg caaccatgta cgagcaactg acttacagcg aagtgctgga
    35701 aaaagagctg aaagtcatgg acctggcggc cttcacgctg gctcgtgacc ataaattacc
    35761 gattcgtgtt ttcaatatga acaaaccggg tgcgctgcgc cgtgtggtaa tgggtgaaaa
    35821 agaagggact ttaatcacgg aataattccc gtgatggata aataagggta agattccgcg
    35881 taagtatcgc gggggcgtaa gtctggttat aaggcgttat tgttgcaggc agtttggtca
    35941 cggccagcgc gcagcaaccg gagcgtacaa aagtacgtga ggatggcgag cactgctcgg
    36001 ggccaaaatg gcaaataaaa tagcctaata atccagacga ttacccgtaa tatgtttaat
    36061 cagggctata cttagcacac ttccactgtg tgtgactgtc tggtctgact gagacaagtt
    36121 ttcaaggatt cgtaacgtga ttagcgatat cagaaaagat gctgaagtac gcatggacaa
    36181 atgcgtagaa gcgttcaaaa cccaaatcag caaaatacgc acgggtcgtg cttctcccag
    36241 cctgctggat ggcattgtcg tggaatatta cggcacgccg acgccgctgc gtcagctggc
    36301 aagcgtaacg gtagaagatt cccgtactct gaaaatcaac gtgtttgatc gttcaatgtc
    36361 tccggccgtt gaaaaagcga ttatggcgtc cgatcttggc ctgaacccga actctgcggg
    36421 tagcgacatc cgtgttccgc tgccgccgct gacggaagaa cgtcgtaaag atctgaccaa
    36481 aatcgttcgt ggtgaagcag aacaagcgcg tgttgcagta cgtaacgtgc gtcgtgacgc
    36541 gaacgacaaa gtgaaagcac tgttgaaaga taaagagatc agcgaagacg acgatcgccg
    36601 ttctcaggac gatgtacaga aactgactga tgctgcaatc aagaaaattg aagcggcgct
    36661 ggcagacaaa gaagcagaac tgatgcagtt ctgatttctt gaacgacaaa aacgccgctc
    36721 agtagatcct tgcggatcgg ctggcggcgt tttgcttttt attctgtctc aactctggat
    36781 gtttcatgaa gcaactcacc attctgggct cgaccggctc gattggttgc agcacgctgg
    36841 acgtggtgcg ccataatccc gaacacttcc gcgtagttgc gctggtggca ggcaaaaatg
    36901 tcactcgcat ggtagaacag tgcctggaat tctctccccg ctatgccgta atggacgatg
    36961 aagcgagtgc gaaacttctt aaaacgatgc tacagcaaca gggtagccgc accgaagtct
    37021 taagcgggca acaagccgct tgcgatatgg cagcgcttga ggatgttgat caggtgatgg
    37081 cagccattgt tggcgctgct gggctgttac ctacgcttgc tgcgatccgc gcgggtaaaa
    37141 ccattttgct ggccaataaa gaatcactgg ttacctgcgg acgtctgttt atggacgccg
    37201 taaagcagag caaagcgcaa ttgttaccgg tcgatagcga acataacgcc atttttcaga
    37261 gtttaccgca acctatccag cataatctgg gatacgctga ccttgagcaa aatggcgtgg
    37321 tgtccatttt acttaccggg tctggtggcc ctttccgtga gacgccattg cgcgatttgg
    37381 caacaatgac gccggatcaa gcctgccgtc atccgaactg gtcgatgggg cgtaaaattt
    37441 ctgtcgattc ggctaccatg atgaacaaag gtctggaata cattgaagcg cgttggctgt
    37501 ttaacgccag cgccagccag atggaagtgc tgattcaccc gcagtcagtg attcactcaa
    37561 tggtgcgcta tcaggacggc agtgttctgg cgcagctggg ggaaccggat atgcgtacgc
    37621 caattgccca caccatggca tggccgaatc gcgtgaactc tggcgtgaag ccgctcgatt
    37681 tttgcaaact aagtgcgttg acatttgccg caccggatta tgatcgttat ccatgcctga
    37741 aactggcgat ggaggcgttc gaacaaggtc aggcagcgac gacagcattg aatgccgcaa
    37801 acgaaatcac cgttgctgct tttcttgcgc aacaaatccg ctttacggat atcgctgcgt
    37861 tgaatttatc ggtactggaa aaaatggata tgcgcgaacc acaatgtgtg gacgatgtgt
    37921 tatctgttga tgcgaacgcg cgtgaagtcg ccagaaaaga ggtgatgcgt ctcgcaagct
    37981 gaggataatc cggctacaga gagtctcgct atttgttagc gtagggcttc agtgatatag
    38041 tctgcgccat ctgatcgtaa gtagttggct ttataaggtc aggtatgccg tggttttgca
    38101 cggctttttt ttgtataggc ttcagtattc ctgagtaccg taaaccctgt cagggaataa
    38161 aaaacgcgtg atgttgtctg ctactcaacc acttagcgaa aaattgccag cgcatggctg
    38221 ccgtcatgtt gcgatcatta tggacggcaa tggtcgctgg gcaaaaaagc aagggaagat
    38281 tcgtgccttt gggcataaag ccggggcaaa atccgtccgc cgggctgtct cttttgcggc
    38341 caacaacggt attgaggcgt taacgctgta tgcctttagt agtgaaaact ggaaccgacc
    38401 agcgcaggaa gtcagtgcgt taatggaact gtttgtgtgg gcgctcgata gcgaagtaaa
    38461 aagtctgcac cgacataacg tgcgtctgcg tattattggc gataccagtc gctttaactc
    38521 gcgtttgcaa gaatgtattc gtaaatctga agcgctaaca gccgggaata ccggtctgac
    38581 gctgaatatt gcggcgaact acggtggacg ttgggatata gtccagggag tcaggcaact
    38641 ggctgaaaag gtgcagcaag gaaacctgca accagatcag atagatgaag agatgctaaa
    38701 ccagcatgtc tgtatgcatg aactggcccc tgtagattta gtaattagga ctggggggga
    38761 gcatcgcatt agtaactttt tgctttggca aattgcctat gccgaacttt actttacaga
    38821 tgttctctgg cccgatttcg atgaacaaga ctttgaaggg gcgttaaatg cctttgctaa
    38881 tcgagagcgt cgtttcggcg gcaccgagcc cggtgatgaa acagcctgat ggggggcgct
    38941 tttgctgaag tatcgcctga tatctgcttt tgtgttaata cccgtcgtca tcgcggcgtt
    39001 gtttctgttg ccgccggtgg ggttcgccat tgtaacgctg gtggtctgca tgctggcagc
    39061 gtgggaatgg ggacagctta gcggttttac cactcgttcg cagcgagtat ggttggcggt
    39121 gttatgcggg ttattgttgg cgctgatgct ttttctgttg ccggaatatc accgaaatat
    39181 tcatcaaccg ctggttgaaa tctcactttg ggcttcgctg ggttggtgga ttgtcgcgct
    39241 attgctggtg ctgttttacc caggttccgc agcaatctgg cgtaattcta aaacattgcg
    39301 ccttattttt ggcgtgctaa ccattgttcc cttcttctgg ggcatgctgg cgttacgggc
    39361 ctggcactat gacgagaatc attacagtgg cgcaatatgg ctgctctatg tcatgatcct
    39421 ggtatggggc gctgactccg gcgcatatat gtttggcaaa ttgtttggta aacataagct
    39481 ggcaccgaag gtttctccgg gtaaaacctg gcaaggcttt ataggtggac tcgctactgc
    39541 agcggtaatc tcatggggtt atggcatgtg ggcgaatctc gacgtcgctc ccgtcacctt
    39601 actcatttgc tctattgtcg cagcgttagc ctcagtgctc ggcgatctga ccgagagtat
    39661 gtttaagcgt gaagcaggaa ttaaggacag cggtcattta attccaggac acggtggtat
    39721 tttagatcgt attgatagcc tgacggctgc ggtaccggtc tttgcttgct tgttgttact
    39781 ggtattcagg acgctttaac ggaaggtaat atgctgagtt ttctctggga tttggcttcg
    39841 ttcatcgttg cactgggtgt acttatcacc gtgcatgaat ttggtcattt ctgggttgcc
    39901 cggcgttgtg gtgttcgcgt tgagcgtttc tcaatagggt ttggtaaggc gctctggcgg
    39961 cgaactgata agctcggcac cgaatatgtt atcgccctga tcccgctggg cggttatgtc
    40021 aaaatgctgg atgagcgcgc agaaccggtc gttccggaac tccgccacca tgccttcaat
    40081 aataaatctg ttggccaacg agcggcgatt attgccgcag gtccggttgc aaacttcatt
    40141 tttgctatct ttgcctactg gctggttttt attattggtg tgcctggcgt acgtccggtg
    40201 gttggtgaaa tggcagccaa ttcgatagct gcggaagcac aaattgcacc aggtacggaa
    40261 ctaaaagccg tagatggtat cgaaacgcct gattgggatg ccgtgcgttt gcagttggtc
    40321 gataaaattg gcgatgaaag caccaccatt acagtagcgc catttggcag cgaccaacgg
    40381 cgggatgtaa agctcgattt acgtcactgg gcgtttgagc ctgataaaga agatccggta
    40441 tcttcgctgg ggattcgtcc tcgtgggctg caaattgaac ctgtactgga aaatgtgcag
    40501 ccaaactcgg cggcaagcaa ggcaggtttg caagcaggcg acaggatcgt taaagtcgat
    40561 ggtcagccct taacgcagtg ggtgaccttt gtgatgcttg tccgggataa cccgggtaaa
    40621 tccttagcgt tagaaatcga aaggcaggga agtcccttgt ctttgacatt aatcccggag
    40681 agtaaaccgg gtaatggtaa agcgattggt tttgtcggta ttgagccgaa agtcattcct
    40741 ttgccagatg agtataaagt tgtacgccag tatgggccgt tcaacgccat cgtcgaagcc
    40801 acggacaaaa cgtggcagct gatgaagctg acggtcagta tgctgggaaa attgatcacc
    40861 ggtgatgtga aactgaacaa cctcagtggg ccgatctcta tcgccaaggg ggctgggatg
    40921 acagcggaac tcggggtagt ttattacctg ccgtttcttg cgcttattag cgtgaactta
    40981 gggataatta acctgtttcc gttgcccgta cttgacgggg cgcatctgct gttccttgcg
    41041 atcgaaaaga tcaagggcgg accggtatcc gagcgggttc aagacttttg ttatcgcatt
    41101 ggctcgattc tgctggtgct gttaatgggg cttgcacttt tcaatgattt ctctcggtta
    41161 tgagagttag ttaggaagaa cgcataataa cgatggcgat gaaaaagttg ctcatagcgt
    41221 cgctgctgtt tagcagcgcc accgtatacg gtgctgaagg gttcgtagtg aaagatattc
    41281 atttcgaagg ccttcagcgt gtcgccgttg gtgcggccct cctcagtatg ccggtgcgta
    41341 caggcgacac ggttaatgat gaagatatca gtaataccat tcgcgctctg tttgctaccg
    41401 gcaactttga ggatgttcgc gtccttcgtg atggtgatac ccttctggtt caggtaaaag
    41461 aacgtccgac cattgccagc attactttct ccggtaacaa atcggtgaaa gatgacatgc
    41521 tgaagcaaaa cctcgaggct tctggtgtgc gtgtgggcga atccctcgat cgcaccacca
    41581 ttgccgatat cgagaaaggt ctggaagact tctactacag cgtcggtaaa tatagcgcca
    41641 gcgtaaaagc tgtcgtgacc ccgctgccgc gcaaccgtgt tgacctaaaa ctggtgttcc
    41701 aggaaggtgt gtcagctgaa atccagcaaa ttaacattgt tggtaaccat gctttcacca
    41761 ccgacgaact gatctctcat ttccaactgc gtgacgaagt gccgtggtgg aacgtggtag
    41821 gcgatcgtaa ataccagaaa cagaaactgg cgggcgacct tgaaaccctg cgcagctact
    41881 atctggatcg cggttatgcc cgtttcaaca tcgactctac ccaggtcagt ctgacgccag
    41941 ataaaaaagg tatttacgtc acggtgaaca ttaccgaagg cgatcagtac aagctttctg
    42001 gcgttgaagt gagcggcaac cttgccgggc actccgctga aattgagcag ctgactaaga
    42061 tcgagccggg cgagctgtat aacggcacca aagtgaccaa gatggaagat gacatcaaaa
    42121 agcttctcgg tcgctatggt tatgcctatc cgcgcgtaca gtcgatgcct gaaattaacg
    42181 atgccgacaa aaccgttaaa ttacgcgtga acgttgatgc gggtaaccgt ttctacgtgc
    42241 gtaagatccg ttttgaaggt aacgatacct cgaaagatgc cgtcctgcgt cgcgaaatgc
    42301 gtcagatgga aggtgcatgg ctgggaagcg atctggtcga tcagggtaag gagcgtctga
    42361 atcgtctggg cttctttgaa actgtcgata ccgataccca acgtgttccg ggtagcccgg
    42421 accaagtaga tgtagtctac aaggtgaaag aacgtaacac cggtagcttc aacttcggga
    42481 ttggttacgg tactgaaagt ggcgtgagct tccaggctgg cgtgcaacag gataactggt
    42541 taggtacagg ttatgctgtt ggtatcaacg ggaccaaaaa cgattaccag acctatgctg
    42601 aattgtcggt aaccaacccg tacttcactg tagatggtgt aagcctcggt ggtcgtctct
    42661 tctataatga cttccaggca gatgacgccg acctgtccga ctataccaac aagagttatg
    42721 gtacagacgt gacgttgggc ttcccgatca acgaatataa ctcgctgcgt gcaggtctgg
    42781 gttatgtaca taactccctg tccaacatgc agcctcaggt tgcgatgtgg cgttatctgt
    42841 actctatggg tgaacatccg agcacctctg atcaggataa cagcttcaaa acggacgact
    42901 tcacgttcaa ctatggttgg acctataaca agcttgaccg tggttacttc ccgacagatg
    42961 gttcacgtgt caacctgacc ggtaaagtga ccattcctgg atcggataac gaatactaca
    43021 aagtgacgtt agacacggcg acttatgtgc cgatcgatga cgatcacaaa tgggttgttc
    43081 tggggcgtac ccgctggggt tatggtgatg gtttaggcgg caaagagatg ccgttctacg
    43141 agaacttcta tgccggtggt tccagcaccg tccgtggctt ccagtccaat accattggtc
    43201 cgaaagcagt ttacttcccg catcaggcca gtaattatga tccggactat gattacgaat
    43261 gtgcgactca ggacggcgcg aaagacctgt gtaaatcgga tgatgctgta ggcggtaacg
    43321 ccatggcggt tgccagcctc gagttcatca ccccgacgcc gtttattagc gataagtatg
    43381 ctaactcggt tcgtacttcc ttcttctggg atatgggtac cgtttgggat acaaactggg
    43441 attccagcca atattctgga tatccggact atagtgatcc aagcaatatc cgtatgtctg
    43501 cgggtatcgc attacaatgg atgtccccat tggggccgtt ggtgttctcc tacgcccagc
    43561 cgttcaaaaa gtacgatgga gacaaggcag aacagttcca gtttaacatc ggtaaaacct
    43621 ggtaagtgtt ctccacaaag gaatgtagtg gtagtgtagc gatgacttta ggcgatcaat
    43681 ataagatcgc cgggccacgc aaagaactgc accctccggt gcaaatggga tggtaaggag
    43741 tttattgtga aaaagtggtt attagcggca ggtctcggtt tagcactggc aacttctgct
    43801 caggcggctg acaaaattgc aatcgtcaat atgggcagcc tgttccagca ggtagcgcag
    43861 aaaaccggtg tttctaacac gctggaaaat gagttcaaag gccgtgccag cgaactgcag
    43921 cgtatggaaa ccgatctgca ggctaaaatg aaaaagctgc agtccatgaa agcgggcagc
    43981 gatcgcacta agctggaaaa agacgtgatg gctcagcgcc agacttttgc tcagaaagcg
    44041 caggcttttg agcaggatcg cgcacgtcgt tccaacgaag aacgcggcaa actggttact
    44101 cgtatccaga ctgctgtgaa atccgttgcc aacagccagg atatcgatct ggttgttgat
    44161 gcaaacgccg ttgcttacaa cagcagcgat gtaaaagaca tcactgccga cgtactgaaa
    44221 caggttaaat aagtaatgcc ttcaattcga ctggctgatt tagcgcagca gttggatgca
    44281 gaactacacg gtgatggcga tatcgtcatc accggcgttg cgtccatgca atctgcacaa
    44341 acaggtcaca ttacgttcat ggttaaccca aaataccgtg agcatttagg cttgtgccag
    44401 gcgtccgcgg ttgtcatgac ccaggacgat cttcctttcg cgaaaagtgc cgcgctggta
    44461 gtgaagaatc cctacctgac ttacgcgcgc atggcgcaaa ttttagatac cacgccgcag
    44521 cccgcgcaga acattgcacc cagtgcggtg atcgacgcga cggcgaagct ggggaacaat
    44581 gtatcgattg gcgctaacgc ggtgattgaa tccggcgttg aactgggcga taacgtgatt
    44641 atcggtgccg gttgcttcgt aggtaaaaac agcaaaatcg gtgcaggttc gcgtctctgg
    44701 gcgaacgtaa ccatttacca tgagatccag atcggtcaga attgcctgat ccagtccgga
    44761 acagtggtag gcgcagacgg ctttggttat gccaacgatc gtggtaactg ggttaagatc
    44821 ccacagattg gtcgcgtaat tattggcgat cgcgtggaga tcggtgcctg cactaccatc
    44881 gatcgcggcg cgctggatga cactgttatt ggcaatggcg tgatcattga taaccagtgc
    44941 cagattgcac ataacgtcgt gattggcgac aatacggcgg ttgccggtgg cgtcattatg
    45001 gcgggcagcc tgaaaattgg tcgttactgc atgatcggcg gagccagcgt aatcaacggg
    45061 catatggaaa tatgcgacaa agtgacggtt acgggcatgg gtatggtgat gcgtcccatc
    45121 actgaaccag gcgtctattc ctcaggcatt ccgctgcaac ccaacaaagt ctggcgcaaa
    45181 accgctgcac tggtgatgaa cattgatgac atgagcaagc gtctgaaatc gcttgagcgc
    45241 aaggttaatc aacaagacta acgttccatc ttttgttcgc caaactttac ggcctgtctc
    45301 attcttacga ttgcggcagg ccgtgttatt attgtcgttt cttatatttt gacaggaaga
    45361 gtatcttgac tactaacact catactctgc agattgaaga gattttagaa cttctgccgc
    45421 accgtttccc gttcttactg gtggatcgcg tgctggattt tgaagaaggt cgttttctgc
    45481 gcgcagtaaa aaatgtctct gtcaatgagc cattcttcca gggccatttc cctggaaaac
    45541 cgattttccc gggtgtgctg attctggaag caatggcaca ggcaacaggt attctggcgt
    45601 ttaaaagcgt aggaaaactg gaaccgggtg agctgtacta cttcgctggt attgacgaag
    45661 cgcgcttcaa gcgcccggtc gtgcctggcg atcaaatgat catggaagtc actttcgaaa
    45721 aaacgcgccg cggcctgacc cgttttaaag gggttgctct ggtcgatggt aaagtagttt
    45781 gcgaagcaac gatgatgtgt gctcgtagcc gggaggcctg atacgtgatt gataaatccg
    45841 cctttgtgca tccaaccgcc attgtggaag agggcgcgtc aattggcgcg aacgcacaca
    45901 ttggtccttt ttgtatcgtt ggaccccatg tcggaattgg tgagggtacc gtactgaaat
    45961 ctcacgttgt cgtgaatggt catactaaaa ttggccgcga taatgagatt tatcagttcg
    46021 cctccatcgg cgaagttaac caggatctga aatatgctgg cgaaccgacc cgtgtggaaa
    46081 tcggcgatcg taaccgcatt cgcgaaagcg tcaccattca tcgtggcaca gtccagggcg
    46141 gtggattgac gaaggtgggc agcgacaact tactgatgat caacgcgcac attgcgcacg
    46201 attgtacggt aggtaaccgc tgtattctcg ccaacaacgc aacgctggcg ggtcacgtat
    46261 cggttgacga cttcgcgatc atcggcggca tgaccgcagt ccatcagttc tgcatcattg
    46321 gtgcgcacgt gatggttggc ggctgctccg gtgtggcgca ggacgtccct ccttatgtca
    46381 ttgcgcaggg taaccacgca acgccgttcg gtgtcaatat cgaagggctg aagcgccgcg
    46441 gattcagccg tgaggcgatt accgctatcc gcaatgcgta taagctgatt tatcgtagcg
    46501 gtaaaacgct cgatgaagtg aaaccggaaa ttgctgaact ggcggaaaca tatccggaag
    46561 tgaaagcctt taccgatttc ttttcacgct caacgcgcgg tctgattcgt taatgactga
    46621 acagcgtcca ttaacgattg ccctggtcgc cggagaaacc tccggcgata tcctgggggc
    46681 cggtttaatc cgcgctctga aagaacgtgt gcccaacgcc cgctttgttg gtgttgccgg
    46741 gccacgaatg caggctgaag gctgcgaagc ctggtacgaa atggaagaac tggcggtgat
    46801 gggcattgtt gaagtgctcg gtcgtctgcg tcgcttactg catattcgtg ccgatctgac
    46861 aaagcgtttt ggcgaactga agccagatgt ttttgttggt attgatgcgc ctgacttcaa
    46921 tattactctt gaaggtaacc tcaaaaagca gggtatcaaa accattcatt acgtcagtcc
    46981 gtcagtctgg gcgtggcgac agaaacgtgt tttcaaaata ggcagagcca ccgatctggt
    47041 gctcgcattt ctgcctttcg aaaaagcgtt ttatgacaaa tacaacgtac cgtgccgctt
    47101 tatcggtcat accatggctg atgccatgcc attagatcca gataaaaatg ccgcccgtga
    47161 tgtgctgggg atccctcacg atgcccactg cctggcgttg ctaccgggga gccgtggtgc
    47221 agaagttgaa atgcttagtg ccgatttcct gaaaacggcc cagcttttgc gccagacata
    47281 tccggatctc gaaatcgtgg tgccactggt gaatgccaaa cgccgcgagc agtttgaacg
    47341 catcaaagct gaagtcgcgc cagacttttc agttcatttg ctggatggga tgggccgtga
    47401 ggcgatggtc gccagcgatg cggcgctact ggcgtcgggt acggcagccc tggagtgtat
    47461 gctggcgaaa tgcccgatgg tggtgggata tcgcatgaag ccttttacct tctggttggc
    47521 gaagcggctg gtgaaaactg attatgtctc gctgccaaat ctgctggcgg gcagagagtt
    47581 agtcaaagag ttattgcagg aagagtgtga gccgcaaaaa ctggctgcgg cgctgttacc
    47641 gctgttggcg aacgggaaaa tcagccacgc gatgcacgat accttccgtg aactgcatca
    47701 gcagatccgc tgcaatgccg atgagcaggc ggcacaagcc gttctggagt tagcacaatg
    47761 atcgaatttg tttatccgca cacgcagctg gttgcgggtg tggatgaagt cggacgcggg
    47821 ccgttagttg gcgcggtcgt caccgctgcg gtgatccttg acccggcgcg cccgattgcc
    47881 gggctgaatg attccaaaaa gctgagcgaa aaacgccgtc tggcgctctg tgaagagatc
    47941 aaagagaaag cgttgagctg gagtctgggc cgcgcggaac cccacgaaat cgacgagctg
    48001 aacattcttc atgcgaccat gctggcgatg cagcgtgccg tcgctgggct gcatattgcg
    48061 ccggaatatg tgttgattga tggtaaccgc tgcccgaaat taccgatgcc tgcgatggct
    48121 gtggtgaaag gcgatagccg cgtaccggaa atcagtgccg cgtctatcct ggcgaaagtg
    48181 acgcgtgacg ccgaaatggc ggcgctggat attgttttcc cgcaatatgg ttttgcccaa
    48241 cacaaagggt acccaaccgc ttttcatctg gaaaaactgg ctgaacacgg cgcgaccgaa
    48301 caccatcggc gcagctttgg gcctgtcaaa cgcgcactgg gacttgcgtc ctgattcttg
    48361 tgtcgagatt aagtaaaccg gaatctgaag atgtctgaac cacgtttcgt acacctgcgg
    48421 gtgcacagcg actactcgat gatcgatggc ctggccaaaa ctgcaccgtt ggtaaaaaag
    48481 gcggcggcgt tgggtatgcc agcactggcg atcaccgatt tcaccaacct ttgtggtctg
    48541 gtgaagttct acggagcggg acatggcgca gggattaagc ctatcgtcgg ggcagatttt
    48601 aacgtccagt gcgacctgct gggtgatgag ttaacccacc tgacggtact ggcggcgaac
    48661 aataccggct atcagaatct gacgttgctg atctcaaaag cgtatcagcg cgggtacggt
    48721 gccgctgggc cgatcatcga tcgcgactgg cttatcgaat taaatgaagg gttgatcctt
    48781 ctttccggcg ggcgcatggg cgacgtcgga cgcagtcttt tgcgtggtaa cagcgcgctg
    48841 gtagatgagt gtgtcgcgtt ttatgaagaa cacttcccgg atcgctattt tctcgagctg
    48901 atccgcaccg gcaggctgga tgaagaaagc tatctgcacg cggcggtgga actggcggaa
    48961 gcgcgcggtt tgcccgtcgt ggcgactaac gatgtgcgct ttatcgacag cagcgacttt
    49021 gacgcacacg aaatccgcgt cgcgatccac gacggcttta ccctcgacga tcctaaacgc
    49081 ccgcgtaact attcgccgca gcaatatatg cgtagcgaag aggagatgtg tgagctgttt
    49141 gccgacatcc ccgaagccct tgccaacacc gttgagatcg ccaaacgctg taacgtaact
    49201 gtgcgtcttg gtgaatactt cctgccgcag ttcccgaccg gggacatgag caccgaagat
    49261 tatctggtca agcgtgcaaa agagggcctg gaagagcgtc tggccttttt attccctgac
    49321 gaggaagaac gtgttaagcg ccgcccggaa tatgacgaac gtctggagac tgaacttcag
    49381 gttatcaacc agatgggctt cccgggctac ttcctcatcg ttatggaatt tatccagtgg
    49441 tcgaaagata acggcgtacc ggtagggcca ggccgtggct ccggtgcggg ttcactggtg
    49501 gcctacgcgc tgaaaatcac cgacctcgat ccgctggaat ttgacctgct gttcgaacgt
    49561 ttccttaacc cggaacgtgt ctccatgcct gacttcgacg ttgacttctg tatggagaaa
    49621 cgcgatcagg ttatcgagca cgtagcggac atgtacggtc gtgatgcggt atcgcagatc
    49681 atcaccttcg gtacaatggc ggcgaaagcg gtgatccgcg acgtaggccg cgtgctgggg
    49741 catccgtacg gctttgtcga tcgtatctcg aaactgatcc cgcccgatcc ggggatgacg
    49801 ctggcgaaag cgtttgaagc cgagccgcag ctgccggaaa tctacgaagc ggatgaagaa
    49861 gttaaggcgc tgatcgacat ggcgcgcaaa ctggaagggg tcacccgtaa cgccggtaag
    49921 cacgccggtg gggtggttat cgcgccgacc aaaattaccg attttgcgcc gctttactgc
    49981 gatgaagagg gcaaacatcc ggtcacccag tttgataaaa gcgacgttga atacgccgga
    50041 ctggtgaagt tcgacttcct tggtttgcgt acgctcacca tcatcaactg ggcgctggag
    50101 atgatcaaca agcggggggc gaagaatggc gagccgccgc tggatatcgc cgcgatcccg
    50161 ctggatgaca agaaaagctt cgacatgctg caacgctcgg aaaccacggc ggtattccag
    50221 cttgaatcgc gcggcatgaa ggacctgatc aagcgtctgc aacctgactg cttcgaagat
    50281 atgatcgcac tggtggcgct gttccgccca ggtccgttgc aatcagggat ggtggataac
    50341 tttatcgacc gtaaacatgg tcgcgaagaa atctcctatc cggacgtaca gtggcagcat
    50401 gaaagcctga aaccggtact ggagccaacc tacggcatca tcctgtatca ggaacaggtc
    50461 atgcagattg cgcaggtgct ttctggttat accctcggtg gcgcggatat gctgcgtcgt
    50521 gcgatgggta agaaaaagcc ggaagagatg gctaagcagc gttctgtatt tgctgaaggt
    50581 gcagaaaaga acggaatcaa cgccgaactg gcgatgaaaa tcttcgacct ggtggagaaa
    50641 ttcgcgggtt acggatttaa caaatcgcac tctgcggcct atgctttggt gtcatatcaa
    50701 acgttatggc tgaaagcgca ctatccggcg gagtttatgg cggcggtaat gaccgccgat
    50761 atggacaaca ccgagaaggt ggtgggcctg gtggatgagt gctggcggat ggggctgaaa
    50821 atcctgccac cagatataaa ctccggtctt taccatttcc acgtcaacga cgacggcgaa
    50881 atcgtgtatg gtattggcgc catcaaaggg gtaggtgaag gtccgattga ggccatcatc
    50941 gaagcccgta ataaaggcgg ctacttccgc gaactgtttg atctctgcgc ccgtaccgac
    51001 accaaaaagt taaaccggcg ggtgctggaa aaactgatca tgtccggggc gtttgaccgt
    51061 cttgggccac accgcgcggc gctgatgaac tcgctgggtg atgcgttaaa agcggcagat
    51121 caacacgcga aagcggaagc tatcggtcag gccgatatgt tcggcgtgct ggccgaagag
    51181 ccggaacaaa ttgaacaatc ctacgccagc tgccaaccgt ggccggagca ggtggtgtta
    51241 gatggggaac gtgaaacgtt aggtctgtac cttacgggac accctatcaa ccagtattta
    51301 aaagagattg agcgttatgt cggaggcgta aggctgaaag acatgcaccc gacagaacgt
    51361 ggtaaagtca tcacggctgc ggggctcgtt gttgccgcgc gggttatggt caccaagcgc
    51421 ggcaatcgta tcggtatctg cacgctggat gaccgttccg ggcggctgga agtgatgttg
    51481 tttactgacg ccctggataa ataccagcaa ttgctggaaa aagaccgcat acttatcgtc
    51541 agcggacagg tcagctttga tgacttcagc ggtgggctta aaatgaccgc tcgcgaagtg
    51601 atggatattg acgaagcccg ggaaaaatat gctagcgggc ttgctatctc gctgacggac
    51661 aggcaaattg atgaccagct tttaaaccga ctccgtcagt ctctggaacc ccaccgctct
    51721 gggacaattc cagtacatct ctactatcag agggcggatg cacgcgcgcg gttgcgtttt
    51781 ggcgcgacgt ggcgtgtctc tccgagcgat cgtttattaa acgatctccg tggcctcatt
    51841 ggttcggagc aggtggaact ggagtttgac taatacagga atactatgag tctgaatttc
    51901 cttgattttg aacagccgat tgcagagctg gaagcgaaaa tcgattctct gactgcggtt
    51961 agccgtcagg atgagaaact ggatattaac atcgatgaag aagtgcatcg tctgcgtgaa
    52021 aaaagcgtag aactgacacg taaaatcttc gccgatctcg gtgcatggca gattgcgcaa
    52081 ctggcacgcc atctacagcg tccttatacc ctggattacg ttcgcctggc atttgatgaa
    52141 tttgacgaac tggctggcga ccgcgcgtat gcagacgata aagctatcgt cggtggtatc
    52201 gcccgtcttg acggtcgtcc ggtgatgatc attggtcatc aaaaaggtcg tgaaaccaaa
    52261 gaaaaaattc gccgtaactt tggtatgcca gcgccagaag gttaccgcaa agcactgcgt
    52321 ctgatgcaaa tggctgaacg ctttaagatg cctatcatca cctttatcga caccccgggg
    52381 gcttatcctg gcgtgggcgc agaagagcgt ggtcagtctg aagccattgc acgcaacctg
    52441 cgtgaaatgt ctcgcctcgg cgtaccggta gtttgtacgg ttatcggtga aggtggttct
    52501 ggcggtgcgc tggcgattgg cgtgggcgat aaagtgaata tgctgcaata cagcacctat
    52561 tccgttatct cgccggaagg ttgtgcgtcc attctgtgga agagcgccga caaagcgccg
    52621 ctggcggctg aagcgatggg tatcatcgct ccgcgtctga aagagctgaa actgatcgac
    52681 tccatcatcc cggaaccgct gggcggcgct caccgtaacc cggaagcgat ggcggcatcg
    52741 ttgaaagcgc aactgctggc ggatctggcc gatctcgatg tgttaagcac tgaagattta
    52801 aaaaatcgtc gttatcagcg cctgatgagc tacggttacg cgtaattcgc aaaagttctg
    52861 aaaaagggtc acttcggtgg ccctttttta tcgccacggt ttgagcaggc tatgattaag
    52921 gaaggatttt ccaggaggaa cacatgaaca tcattgccat tatgggaccg catggcgtct
    52981 tttataaaga tgagcccatc aaagaactgg agtcggcgct ggtggcgcaa ggctttcaga
    53041 ttatctggcc acaaaacagc gttgatttgc tgaaatttat cgaacataac cctcgaattt
    53101 gcggcgtgat ttttgactgg gatgagtaca gtctcgattt atgcagcgat atcaatcaac
    53161 ttaatgaata tctcccgctt tatgccttca tcaacaccca ctcgacgatg gatgtcagcg
    53221 tgcaggatat gcggatggcg ctctggtttt ttgaatatgc gctggggcag gcggaagata
    53281 tcgccattcg tatgcgtcag tacaccaacg aatatcttga taacattacg ccgccgttca
    53341 cgaaagcctt gtttacctac gttaaagagc ggaagtacac cttttgtacg ccggggcata
    53401 tgggcggcac cgcatatcaa aaaagcccgg ttggctgcct gttttatgat tttttcggcg
    53461 ggaataccct caaggctgat gtctctattt cggtcaccga gcttggttcg ttgctcgacc
    53521 acaccgggcc acacctggaa gcggaagagt acatcgcgcg gacttttggc gcggaacaga
    53581 gttatatcgt taccaacgga acatcgacgt cgaacaaaat tgtgggtatg tacgccgcgc
    53641 catccggcag tacgctgttg atcgaccgca attgtcataa atcgctggcg catctgttga
    53701 tgatgaacga tgtagtgcca gtctggctga aaccgacgcg taatgcgttg gggattcttg
    53761 gtgggatccc gcaccgtgaa tttactcgcg acagcatcga agagaaagtc gctgccacca
    53821 cgcaggcaca atggccggtt catgcggtga ttaccaactc cacctatgat ggcttgctct
    53881 acaacaccga ctggatcaaa cagacgctgg atgtcccgtc gatccacttc gattccgcct
    53941 gggtgccgta cacccatttt catccgatct accaggggaa aagtggtatg agcggcgagc
    54001 gtgttgcggg aaaagtgatc ttcgaaacgc aatcgaccca caaaatgctg gcggcgttat
    54061 cgcaggcttc gctgatccac attaaaggcg agtatgacga agaggcgttt aacgaagcct
    54121 ttatgatgca taccaccacc tcgcccagtt atcccattgt tgcttcggtt gagacggcgg
    54181 cggcgatgct gcgtggtaat ccgggcaaac ggctgattaa ccgttcggtg gagcgggcgc
    54241 tgcattttcg caaagaggtc cagcggttgc gggaagagtc tgacggttgg tttttcgata
    54301 tctggcaacc gccgcaggtg gatgaagccg aatgctggcc cgttgcgcca ggcgaacagt
    54361 ggcacggctt taacgatgcg gatgccgatc atatgtttct cgatcccgtt aaagtcacta
    54421 ttttgacacc ggggatggac gaacagggca atatgagcga ggaggggatc ccggcggcgc
    54481 tggtggcaaa attcctcgac gaacgtggga tcgtagtaga gaaaaccggc ccttataacc
    54541 tgctgtttct ctttagtatt ggtatcgata aaaccaaagc aatgggatta ttgcgtgggt
    54601 tgacggaatt taaacgctct tacgatctca acctgcggat caaaaatatg ctacccgatc
    54661 tctatgctga agatcccgat ttctaccgca atatgcgtat tcaggatctg gcgcaaggga
    54721 tccataagct gattcgtaaa cacgatcttc ccggtttgat gttgtgggca ttcgatactt
    54781 tgccggaaat gatcatgacg ccacatcagg catggcagag acagattaaa ggtgaagtag
    54841 aaaccattgc gctggaacaa ctggtcggta gagtatcggc aaatatgatc ctgccttatc
    54901 caccgggcgt accgctgttg atgccaggag aaatgctgac caaagagagc cgcacggtac
    54961 tcgattttct actgatgctt tgttccgtag ggcaacatta ccccggtttt gaaacggata
    55021 ttcacggcgc gaaacaggac gaagacggcg tttaccgcgt acgagtccta aaaatggcgg
    55081 gataacttgc cagagcggct tacgggcgag taacgtgctg ttaacaaata aaggagacgt
    55141 tatgctgggt ttaaaacagg ttcaccatat tgcgattatt gcgacggatt atgcggtgag
    55201 caaagctttc tactgcgata ttcttggttt cacgctgcaa agcgaagtct atcgcgaagc
    55261 gcgcgactcg tggaaagggg atttggcgct taatgggcaa tatgtgattg agcttttctc
    55321 ttttccgttc ccgccggagc gccccagccg accggaagct tgcggcctgc gtcatctggc
    55381 ttttagcgtt gatgacatcg atgcggcagt ggcgcacctt gaaagccata acgtgaagtg
    55441 tgaagccatc tgtgtcgatc catacacgca aaaacgcttc accttcttta acgatccgga
    55501 cgggctgccg ttggaactgt atgagcagta aggcttgtca tcgccgcatt tgcccggtaa
    55561 cgtgccgggc attgctactg taaaatcgca ccatcatgac actcacgctc aatagacaac
    55621 ttctcacctc acgccagatt ttggtcgcct ttagcggcgg gcttgactcc accgttctgc
    55681 tgcatcagtt ggtgcagtgg cggacggaaa atccgggcgt cactctgcgc gctattcatg
    55741 tgcatcacgg tttaagtgcc aatgccgatg cctgggttac gcattgcgaa aacgtctgcc
    55801 aacagtggca ggtgccgctg gtggtcgaac gcgtacaact tgcgcaagag gggctgggga
    55861 ttgaggccca ggcgcggcag gcgcgttatc aggcatttgc ccgtacccta ttgcccggcg
    55921 aagtgctggt caccgcgcaa catctcgacg atcaatgtga aacctttctg ctggcgctaa
    55981 aacgcggtag cggccctgcc gggctttcgg ctatggcgga agtttcggag tttgccggaa
    56041 cacggcttat ccgcccgttg cttgcccgca cgcgggggga actggcgcag tgggcattgg
    56101 cgcatggttt acgctggatt gaagacgaaa gtaatcagga cgactcatac gatcgtaact
    56161 ttctgcgcct gcgcgtagtg ccgttattgc agcagcgttg gccgcatttt gcggaagcaa
    56221 cggcccgcag cgccgcactt tgtgctgaac aagagagtct gttggatgaa ctgctggcgg
    56281 atgatttagc acactgccaa acgtcgcagg ggacgctgca gattgcgcca atgctggcga
    56341 tgagtgatgc ccgccgcgcg gcgattatcc gtcgctggct ggcagggcag aatgcaccaa
    56401 tgccttcccg cgacgcgctg gtgcggatct ggcaggaagt ggcgctggcg cgggaagatg
    56461 cctccccctg tttacgcttg ggcgcgtttg aaatccgccg ctatcagtcg caactgtggt
    56521 ggattaaatc cgtcaccggg caaagtgaaa ccattgtgcc gtggcagacg tggctacaac
    56581 cgctggaatt accggcgggg ctgggaagcg tacagcttac tgcgggaggc gatattcgcc
    56641 ctccgcgtgc agacgaagcg gtcagcgtgc gtttcaaatc ggcaggattg ctgcatattg
    56701 tcgggcgcaa cggcggacgt aagctgaaga aaatctggca agagttaggc gtgccgccgt
    56761 ggctacgtga caccacgcca ctgctgtttt atggcgaaac gctgattgcg gcggcagggg
    56821 tatttgtgac gcaagaaggt gtggctgaag gtgagaatgg cgtaagtttt gtctggcaga
    56881 aaacgcttag ttaagtgaaa gccggataag acgcatcaaa cgtcgcatcc ggcgaaagtc
    56941 aatcaggact cgctcaccac caccgtaccg atttccgggt ggctaaagct ggtaatttta
    57001 tccagacgta gctcacgggt ttcgccagcg gcctcgacga ccagatactc cacatttttg
    57061 cgggagacta aatcgctggc ttttgcctgc aatttttcgc catctttcag ctcaagtgtc
    57121 agcattaaat gatgctggca ggcgagctca agattatcgt aatcatcaca attgattggt
    57181 tgatacgtat cattcattga cataatcgct caccagtaag tttgccgcag cgtatgctgc
    57241 tttttccctg acagcctcag aaagggcgtc gtcggcagcc atttcattca gcactttcaa
    57301 aacgcagccc agcgcgtccg gaacgtatcc taagtctccg ctggcgattt ccgcgtaccg
    57361 cttgcgtatt aactcacaat atttttccac atgccctcct gtcagcacac tgacttaacc
    57421 gtggatgcaa gtctaagcct acgaagataa actctgtttc gcaaggtgac tataccacac
    57481 tcatttctgc aatatcagcg ccgcaactgc acgtattccg ttacaatggc ctcctgattc
    57541 gaaaggagtt ttcttatagc gcttaaagcg acaatttata aagcgacggt taatgtggcc
    57601 gatctcgacc gcaaccagtt tctcgatgcc tctctgacgc tggcgcgcca cccttcagaa
    57661 acccaggagc gtatgatgct gcgcctgctg gcgtggctga aatatgctga tgaacgtctg
    57721 caatttaccc gtggtttgtg tgccgatgat gagccggaag cgtggctgcg taacgatcac
    57781 ctgggcattg atttgtggat tgagctggcg ctgccggatg agcggcggat taagaaagcc
    57841 tgcacccagg ccgcagaagt ggcgctgttt acctataata gtcgggcggc gcaaatctgg
    57901 tggcagcaaa atcagagcaa atgtgtgcag tttgccaatc tttccgtctg gtatctggac
    57961 gatgaacaac tggcgaaagt aagcgccttt gccgatcgta ccatgacgct gcaggcaacg
    58021 attcaggatg gcgtgatctg gttatcggac gataagaata atctggaagt taacttaacc
    58081 gcctggcaac aaccttcatg attgtgattt cccgacatgt tgctattccc gatggtgagc
    58141 ttgagatcac cgccattcgt gcgcagggcg cgggcgggca gcatgttaat aagacctcaa
    58201 cggccattca tctgcgtttt gacattcggg cgtccagcct gccagagtat tacaaagagc
    58261 gtctgctcgc cgccagccat catttgatca gcagtgatgg cgtgattgtc attaaggcac
    58321 aggaataccg cagtcaggaa ctgaaccgcg aagccgcgct agcccggctg gtggcagtga
    58381 ttaaagattt aacaacagaa caaaaagccc gacgacccac gcggcccacc cgtgcatcga
    58441 aagagcgcag gctggcatcg aaagcacaaa aatcaagcgt gaaggcgatg cgcggcaaag
    58501 tacgcagcgg tcgggaataa aaagaaggaa tagatggtga aaaaagcgat agtgacagcg
    58561 atggctgtaa tcagcctctt tactctgatg ggatgtaata accgggccga agtcgatacg
    58621 ctttctccag cacaggctgc cgaactgaaa ccgatgccgc aaagttggcg cggcgtgctg
    58681 ccgtgtgctg attgtgaagg aatcgaaacc tctctgttcc tcgaaaaaga cggaacatgg
    58741 gtgatgaatg agcgttatct cggtgctcgt gaagaacctt cctccttcgc ttcctacggt
    58801 acatgggcgc gaaccgctga caagctggta ttaaccgaca gcaaaggtga aaagtcatat
    58861 tatcgggcga aaggcgatgc gctggagatg ctcgatcgtg aaggcaatcc gattgaatcg
    58921 cagttcaact atacgctgga accggcacaa tccagtttac ctatgacgcc gatgaccctg
    58981 cgaggcatgt atttttatat ggctgatgcg gcgaccttca ctgattgcgc gaccggaaaa
    59041 cgtttcatgg tagcgaataa cgcagagctg gagcgtggct acctggctgc gcgcggtcac
    59101 agtgaaaaac cggtgttact gtcagtagaa ggtcacttta cgcttgaggc taatccggat
    59161 actggtgcgc caaccaaagt attagcgccc gatacggcgg gtaaatttta cccgaataag
    59221 gattgcagta gtttggggca gtaaacctgc ttaaggcaga aacaaacgca aaacaggcca
    59281 gaaggatata tttcaacatt ttgaatttgc acgttttttg taggccggat aaggcgttta
    59341 cgccgcatcc ggcaatggtg ctcaacgcct gatgcgactc tggcgcgtct tatcatgcct
    59401 acaacccccc tcatacctta aggcggataa ggcatttact ttatcaccgg gtcaaaccaa
    59461 caaagcgacc cgccttgata taaatccctg gcttcaggtg cccaacatac tgtaactgcg
    59521 tttctggctt aaacgcagag acatcaccaa tacgcatatg catcagatcg gcagggctaa
    59581 tccagcccga ttgcgccagt gtaagtggat gtccggcttt ggcaaatgca tcagtgacaa
    59641 attccgaaca aaaccacgac tttttgtctc cttcgcccac actgcttaac tgcgctttcg
    59701 ccaggccgct gacgcactgt tggcgaaaat cctcggagaa cggattcagt gagcacatct
    59761 ggcgagtcac cataaaggga ataaattcga caatgccgcg atagttataa ccgctatctt
    59821 tgattttatt ggcaaacgcg gtgatatctg tggcttgttg cggggtaaga tccgggactc
    59881 gtaagacgaa aagcttatca ctatgcttca tcgctttttt aagggaaaca atctggacgc
    59941 cagcgcctgt cgcttctgca acgttattat cacccagaaa gattgcaacg tgactcacag
    60001 aggaagtgct gaagacgcgg attccaaatg aggttacccc aaggcttgag gagaacagca
    60061 aatcgccggg tttgagatca ggtgccgtta tttcttttat tgattgttcg gtgaaagagc
    60121 tttgatgctg gaatttgaca gcccatgttt ttgcctcggc atctactgct gtggctgatg
    60181 ggtctggctg gctgatatca acggtacaag ccgaaagtaa aagaaagctg gggagaagca
    60241 ggcggcagta cgcctttggt ttatccattt tatacaatcc atgtaaaaaa gggccctgaa
    60301 attcaggacc ctttctggca tcagccttta atctgtttca ccagatattc gacgatgtca
    60361 ccagtcttaa ttaactgttt ctcgccgttg cgacgatatt tatattcgat atcgtcgttg
    60421 tcgaggttac ggtcgcccag cacaatagtg tgcggaatac cgatcagttc catatcagca
    60481 aacatcacgc ccggacgctc tttgcggtca tccagcagca cttcgatacc ttgtgcacgc
    60541 agttcgctgt acagtttctc agcaagctct tgtacgcgga aggatttgtg catgttcatc
    60601 ggcagaatcg ccacctggaa cggcgcgata gcgtcaggcc atacgatgcc gcgttcgtcg
    60661 tagttctgct caatcgccgc agctaccaca cgcgttaccc cgataccgta gcaacccatc
    60721 gtcaggattt ggttacggcc atcttcaccc tgtacggagg ctttcagtgc ttcggagtac
    60781 ttggtaccca gctggaagat gtgaccaact tcgataccac gtttgatcag cagcgtaccc
    60841 tggccatccg ggcttggatc gccagccacc acgttacgga tatctgcaac ttccggggta
    60901 gcgacatcgc gatcccagtt gataccgaag tagtgtttac catcgatgtt agcaccagca
    60961 gcgaaatcac tcatcgccgc aacggtacgg tcaatcacca ccggaatcgg catgtttacc
    61021 ggacccagtg aacccggacc ggctttaacc acagcacgaa tttcttcttc ggtcgcgaaa
    61081 gtcagcgggc ttgcaacctg cggcagtttt tctgctttaa cttcgttcag ctcgtgatca
    61141 ccgcgcacca gcagcgcaac cagcgggaag ctgctgcctt caaccgcttt aaccagcaga
    61201 gtcttaaccg ttttctcaat cggcagattg aactgttcaa ccagttccgc gatggttttc
    61261 gcgttcggcg tatcaaccag cgtcatttcc tgggtagcag cagcgcgcgg ttctttcggc
    61321 gcgatagctt ctgccagttc aatgttcgct gcatagtcag aggtgtcgga gaagaccaca
    61381 tcgtcttcac cgctctgcgc cagcacctgg aattcgtgag aggcgctgcc gccgatagaa
    61441 ccggtgtcgg cttgcacggc gcggaaatcc agccccatgc ggctgaagat tttgctgtag
    61501 gccgcataca ttgcatcgta ggtttcctgc agggattcct gagaagtatg gaaagagtaa
    61561 gcatctttca tcaggaattc gcgggaacgc atgacgccga aacgcggacg cacttcgtcg
    61621 cggaacttgg tctggatctg atagaagttc agcggcagct gtttgtaaga gctaagctcg
    61681 ttacgaatca ggtcagtgat aacttcttca tgagttgggc cgagtacgaa cggacgctcg
    61741 ccacggtcaa caaaacgcag cagttccgga ccgtactgtt cccaacgacc actctcttgc
    61801 cacaaatcgg ctggctgaac caccggcatc gacacctcga ttgcaccggc gttgttcatc
    61861 tcttcacgca cgatgttttc gacttttttc agaacgcgca cgccggtcgg cagccaggta
    61921 tataacccgg aggccagctt gcggatcatc ccggcgcgca gcatcagctg atggctgatc
    61981 acctcggcgt cggcaggtgt ctccttgaga gtggagagca ggtattggct agtacgcatg
    62041 ttgttacggt tccagttgga aggtagaaca ggctcaaggc gagcctggga caaaaaaagt
    62101 gatttagttt accagtgcaa aagaaatgtc aaaagagaag ggcgtgaatt taacgcggtt
    62161 ccagcgcaaa gacttcaaaa cctgcgtcgg tgacgcgcca gcgaacgtta aaatcatgta
    62221 gccagacggc ataggttttg cccgtttcct cacctttatg ataggccggg cgcgggtcct
    62281 gcgccagtac ttcgcggata aacagcgtta actgcggata acgcttctcc agcgtcaaaa
    62341 gctggttttc gacctctgcg gtaaaactca ccgccatctc tgcagctggc gcactttgcg
    62401 catagctggc actggcatcg ggaagcgatt cggcaaaggg gagatacggt ttgatatcca
    62461 ctaccggcgt accatcgacc agatccagac tgccgagctt cagaatcacg ctgtctttat
    62521 ggcaaacaac ctctttcagc tctaccagcg acataccaat tgggttaggg cggaaagtag
    62581 agcgtgttgc gaaaaccccc attctggcgt taccgccgag gcgcggtgga cgcacagtcg
    62641 gacgccagcc gccttccatc gtttgatgaa agacgaaaag gatccataaa tggctgaacg
    62701 cttccaggcc gcgaacggcg tcggcctggt tgtagggagc aatgagatgc agttcgccgt
    62761 tggcgctttt taccagacct ggctggcgcg gaacggcgaa tttttcttta tagggcgagc
    62821 gaataacgcc tatttgctcg aactggaaac tgctcatttc gccgtaatgt taagcgcaga
    62881 gccgatacat acagcctgac gatagcagcc tggcgtaccg ctggtgactt cgcagctatg
    62941 cagtaatacc gcattggctt tcattttaga ggcgttgatt tgcatccgct tacgcgcggt
    63001 tggaatgctc ggcggagagt cctgattaga ggcctggcaa gagtcgccac tgacttcacc
    63061 gagatcgcgg aacggtttgc cgactaattc ttctgcattg gtataaattc ggaccggcgt
    63121 ggcgcgcggc gctttcggtt ttgcaggctc cgctttcggc tggggtgcag tgctttgaac
    63181 gggttcgaca ggggatctgc ttaacatgga acagccgctt agcatgagtg ctactaaaca
    63241 gatcggtaaa gcacgcatag tatttcctca atgtatgatc aaaacgtcaa tattgaatca
    63301 ggagcttgta aaaatgacaa gacgggcaag tgcccatcct gaatgatatt acaaattgtg
    63361 gaaacagcct aaaaattacc agcctttaac agcgccgccg ttaaacactt tgtttgctgc
    63421 ttcgtaaact tcatcagact gataagcctg gacgaatttc ttcacgttct cggcgtcttt
    63481 gttatcttca cgcgttacga tcaggtttac gtacggggag tctttatctt cgacaaagat
    63541 accgtctttc gctggagtca ggccaatctg gctggcatag gtggtattga taactgccag
    63601 agcgatttgc gcgtcgtcca gagatcgagg cagctgcggt gcttccagct caacaatttt
    63661 cagatttttt gggttctcaa caacatcaag tacggtcggc agcaggccaa cgccatcttt
    63721 cagtttgatc aagcccactt tttgcagcag cagcagtgaa cgaccaaggt tagttggatc
    63781 gtttggcacg gcaacctgcg aaccatcctg cagttcatcc agtgatttga ttttcttgga
    63841 gtaaccagca atcggataaa caaaagtgtt gcctactgcg accagtttgt agccacgatc
    63901 tttcagttgc tgatcaaggt acggtttatg ctggaaggcg ttggcgtcga tatcgccttt
    63961 gctcaatgct tcgtttggca gaacatagtc gttgaaggtt accagctcaa cgtctaggcc
    64021 atatttgtct ttcgcaactt tctgcgcgac ttctgcaacc tgctgttcgg caccaacaat
    64081 cacgccgact ttaatgtggt ttggatcttt ttcatcctga ccgcagccta ccagtgccag
    64141 tgatccaatc agggctccca ctgccgcaaa ggttttgaat ttgaacgcca taccttattc
    64201 cttcttcaat tatttatgtt gtgttgaacg ttacttgcga gtgacagccc ggacgatgcg
    64261 gtcgcctgcg aactgaatta aataaaccag aatgaccagc aataccagta tcgtattcat
    64321 caccgtcgcg ttatagccga tgtagccata ctgatagcca atctgaccta aaccaccggc
    64381 accgacagca ccacccatcg cggaataacc gaccagggta atcagggtga tagttgccgc
    64441 attcaccaga cccggcaatg cttccggtaa cagcacttta cggacgatct gcatcggcgt
    64501 ggcacccatt gcacgggaag cttcaattaa cccggttggg atctccagca gagcgttctc
    64561 gaccatacgg gcaataaacg gtgctgcacc aacggttaac ggaacaatcg ctgcctgcaa
    64621 accaatcgat gtaccaacaa taacgcgggt aaacggaatc gtccatacca gcaagataat
    64681 gaacgggata gaacggaaaa tgttcacaat cgcagaaacg gtacgataca gcttcgcgtt
    64741 agcaataatt tgccccggac gcgtgacata aagcagaacg ccaaccggca gaccaatcac
    64801 aaagccaaaa aaaccggata cgaaggtcat tgccagcgtt tcccatacgc cacgaaccag
    64861 cagccacatc atcggctcag acataaccca gtacctctac ttttacatgg tgttcctgca
    64921 gccaggcaat ggcggcttgc gtatcttgtt gtgtgccgtg catttcagtc agcatgatgc
    64981 cgaacttaac gccaccggcg tagtccatct gcgcgctaat aatgttgttg ttgacgttga
    65041 aacgacgcgc ggtttcagaa agcagtgggg catcgaccga ttgaccggta aactccagac
    65101 gcagcatcgg cacgcagtca gtaaatggct ccgcttgcag acgttcctgg taatcttccg
    65161 ggatatccag atgcagggtc gactgaataa acttctgcgc cagcggcgtt ttcggatgcg
    65221 agaacacttc acttaccgtg tcctgctcga tcagttcgcc attgctgatg accgccacgc
    65281 aatcacaaat acgcttcaca acgtccattt cgtgggtgat caacagaatc gtcaaaccca
    65341 gacggcggtt aatgtctttc agcagttcga gaatagaacg tgtcgttgcc gggtccagcg
    65401 cgctggtggc ttcatcacac agcaatactt tgggattgct ggctaatgca cgggcaatcg
    65461 ccacacgttg tttctgccca ccggaaagat tcgacgggta gctatcatgc ttatcgccaa
    65521 gaccaaccaa tgacagcaat tccgtcacgc gacgtttgat ctcgtctttc ggtgtgttgt
    65581 ccagctccag cggcagagcc acgttgccaa aaacagtacg cgaagagagc aggttaaaat
    65641 gctggaaaat cataccaatc tggcggcgag ctttggtcaa ctcggattct gacagcgtgg
    65701 tcagttcctg gccatcgacc agcacgctac cctcggttgg gcgctccagc aggtttacac
    65761 aacgtataag cgtactctta cccgcgcctg aggcaccgat aacgccataa atttgtccag
    65821 ctggcacatg caggctgacg ttgttcaacg cctggatggt gcgggtgccc tggtggaaca
    65881 ctttggtgat attcgaaagt tttatcattg attatttatt atcgtcatta agttagtcgt
    65941 ggcatctcga atgcctgaaa cgggcaacgc cgtcaatgaa atggatgtta aggcatccag
    66001 acgtctaaat caatcaggtt tatgcgaaga gcactttctt gcaggtcgaa acatgcgata
    66061 ctagcgtcac atgccttatt aaggagctat aaaaggtggc aaagagcgta cccgcaattt
    66121 ttcttgaccg tgatggcacc attaatgtcg atcacggcta tgtccatgag atcgacaact
    66181 ttgaatttat cgacggtgtt attgacgcca tgcgcgagct aaaaaaaatg ggctttgtgc
    66241 tggtggtagt aaccaaccag tctggcattg ctcgcggtaa atttaccgaa gcacagtttg
    66301 aaacgctgac cgagtggatg gactggtcgc tggcggaccg agatgtcgat ctggatggta
    66361 tctattattg cccgcatcat ccgcagggta gtgttgaaga gtttcgccag gtctgcgact
    66421 gccgtaaacc acatccgggg atgcttttgt cagcacgcga ttatttgcat attgatatgg
    66481 ccgcttctta tatggtgggc gataaattag aagatatgca ggcagcggct gcggcgaacg
    66541 tgggaacaaa agtgctggtg cgtacgggta aacctattac gtctgaagca gaaaacgcgg
    66601 cggattgggt gttaaatagc ctggcagacc tgccgcaagc gataaaaaag cagcaaaaac
    66661 cggtataatg attaaaagat gagcgattga aataaaaatg catttttcca cttgtcttcc
    66721 tgagacgact ccctataatg c
//
LOCUS       DADMHC010000003        60811 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.003, whole genome shotgun sequence.
ACCESSION   DADMHC010000003 DADMHC010000000
VERSION     DADMHC010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 60811)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 60811)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..60811
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.003"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..354)
                     /locus_tag="JNZ57_000123"
     CDS             complement(<1..354)
                     /locus_tag="JNZ57_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate starvation-inducible protein PsiE"
                     /protein_id="HAY8826482.1"
                     /translation="MTVFNKFARSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFF
                     VLTILVVKRISSLPLRLLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAISVLQSDP
                     DEVVKMLGMYIPYLCA"
     gene            complement(813..899)
                     /locus_tag="JNZ57_000124"
     tRNA            complement(813..899)
                     /locus_tag="JNZ57_000124"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(863..865),aa:Leu,seq:gag)
     gene            complement(914..1246)
                     /gene="secG"
                     /locus_tag="JNZ57_000125"
     CDS             complement(914..1246)
                     /gene="secG"
                     /locus_tag="JNZ57_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HAY8826483.1"
                     /translation="MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFG
                     SSGSGNFMTRMTALLATLFFIISLVLGNINSNKTNKGSEWENLSAPAKTEQTQPAAPA
                     KPTSDIPN"
     gene            complement(1474..2811)
                     /gene="glmM"
                     /locus_tag="JNZ57_000126"
     CDS             complement(1474..2811)
                     /gene="glmM"
                     /locus_tag="JNZ57_000126"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003905541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HAY8826484.1"
                     /translation="MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRK
                     IIIGKDTRISGYMLESALEAGMAAAGLSALFTGPMPTPAVAYLTRTFRAEAGIVISAS
                     HNPFYDNGIKFFSIDGTKLPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIE
                     FCKATFPNELSLSELKIVVDCANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVG
                     ATDVRALQARVLAEKADLGIAFDGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQL
                     RGGAVGTLMSNMGLELALKQLGIPFARAKVGDRYVLEKMQEKGWRIGAENSGHVILLD
                     KTTTGDGIVAGLQVLAAMARNHMSLHDLCSGMKMFPQILVNVRYTAGSGDPLEHESVK
                     AVTAEVEAALGNRGRVLLRKSGTEPLIRVMVEGEDEAQVTEFAHRIADAVKAV"
     gene            complement(2804..3652)
                     /gene="folP"
                     /locus_tag="JNZ57_000127"
     CDS             complement(2804..3652)
                     /gene="folP"
                     /locus_tag="JNZ57_000127"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312083.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HAY8826485.1"
                     /translation="MKLFAQGTSLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHA
                     NLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWLSVDTSKPEV
                     IRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAE
                     VNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGM
                     SRKSMIGQLLNVGPSERLSGSLACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAK
                     ENKRYE"
     gene            complement(3742..5676)
                     /gene="ftsH"
                     /locus_tag="JNZ57_000128"
     CDS             complement(3742..5676)
                     /gene="ftsH"
                     /locus_tag="JNZ57_000128"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HAY8826486.1"
                     /translation="MAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNND
                     QVREARINGREINVTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEPSLLASI
                     FISWFPMLLLIGVWIFFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEA
                     KEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISG
                     SDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLN
                     QMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVH
                     MRRVPLAPDIDAAIIARGTPSFSGADLANLVNEAALFAARGNKRVVSMIEFEKAKDKI
                     MMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLP
                     EGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWG
                     FSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTD
                     NMDILHAMKDALMKYETIDAPQIDDLMARRDVRPPAGWEEPGASNNSGDNGSPKAPRP
                     VDEPRTPNPGNTMSEQLGDK"
     gene            complement(5776..6405)
                     /gene="rlmE"
                     /locus_tag="JNZ57_000129"
     CDS             complement(5776..6405)
                     /gene="rlmE"
                     /locus_tag="JNZ57_000129"
                     /EC_number="2.1.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uridine(2552)-2'-O)-methyltransferase
                     RlmE"
                     /protein_id="HAY8826487.1"
                     /translation="MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQ
                     SDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRD
                     ELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGS
                     FVVKVFQGEGFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRKP"
     gene            6531..6824
                     /gene="yhbY"
                     /locus_tag="JNZ57_000130"
     CDS             6531..6824
                     /gene="yhbY"
                     /locus_tag="JNZ57_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014833438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HAY8826488.1"
                     /translation="MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHH
                     ELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR"
     gene            complement(6981..7457)
                     /gene="greA"
                     /locus_tag="JNZ57_000131"
     CDS             complement(6981..7457)
                     /gene="greA"
                     /locus_tag="JNZ57_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006178768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HAY8826489.1"
                     /translation="MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKE
                     NAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEE
                     QTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL"
     gene            7705..9138
                     /gene="dacB"
                     /locus_tag="JNZ57_000132"
     CDS             7705..9138
                     /gene="dacB"
                     /locus_tag="JNZ57_000132"
                     /EC_number="3.4.16.4"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
                     /protein_id="HAY8826490.1"
                     /translation="MRFSRFIIGLTSCIAFSVQAANVDEYVTQLPAGANLALMVQKVG
                     ASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLV
                     ARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCF
                     SAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE
                     LDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLR
                     QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSD
                     AVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPL
                     AGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV
                     EPADQRNRRIPLVRFESRLYKDIYQNN"
     gene            complement(9178..10350)
                     /gene="cgtA"
                     /locus_tag="JNZ57_000133"
     CDS             complement(9178..10350)
                     /gene="cgtA"
                     /locus_tag="JNZ57_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Obg family GTPase CgtA"
                     /protein_id="HAY8826491.1"
                     /translation="MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGD
                     VWMEADENLNTLIDYRFEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTG
                     ETMGDMTKHGQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLA
                     DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI
                     EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAAK
                     PRWLVFNKIDLLDKAEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIE
                     NPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEEDDEDWDDDWDEDDEEGVEFIYKR"
     gene            complement(10366..11331)
                     /locus_tag="JNZ57_000134"
     CDS             complement(10366..11331)
                     /locus_tag="JNZ57_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012135318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HAY8826492.1"
                     /translation="MKQQAGIGILLALTTAICWGALPIAMKQVLEVMEPPTIVFYRFL
                     MASIGLGAILAVKKRLPPLRVFRKLRWLILLAVATAGLFGNFILFSSSLQYLSPTASQ
                     VIGQLSPVGMMVASVFILKEKMRSTQVVGALMLLSGLVMFFNTTLVEIFTKLTDYTWG
                     VIFGVGAATVWVSYGVAQKVLLRRLASPQILFLLYTLCTIALFPLAKPGVIAQLSHWQ
                     LACLIFCGLNTLVGYGALAEAMARWQAAQVSAIITLTPLFTLFFSDLLSLAWPDFFAR
                     PMLNLLGYLGAFVVVAGAMYSTIGHRIWGGLRKHTTVVSQPRAGE"
     gene            complement(11458..11715)
                     /gene="rpmA"
                     /locus_tag="JNZ57_000135"
     CDS             complement(11458..11715)
                     /gene="rpmA"
                     /locus_tag="JNZ57_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007369914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HAY8826493.1"
                     /translation="MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTK
                     FHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE"
     gene            complement(11736..12047)
                     /gene="rplU"
                     /locus_tag="JNZ57_000136"
     CDS             complement(11736..12047)
                     /gene="rplU"
                     /locus_tag="JNZ57_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015960603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HAY8826494.1"
                     /translation="MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANG
                     EEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGIS
                     A"
     gene            12306..13277
                     /gene="ispB"
                     /locus_tag="JNZ57_000137"
     CDS             12306..13277
                     /gene="ispB"
                     /locus_tag="JNZ57_000137"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HAY8826495.1"
                     /translation="MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGG
                     KRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAA
                     FGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITE
                     ENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNA
                     DGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQGNGRHLLEPVLEAMN
                     ACGSLEWTRQRAEEEADKAIAALQVLPDTPWREALIGLAHIAVQRDH"
     gene            13506..13784
                     /gene="sfsB"
                     /locus_tag="JNZ57_000138"
     CDS             13506..13784
                     /gene="sfsB"
                     /locus_tag="JNZ57_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator SfsB"
                     /protein_id="HAY8826496.1"
                     /translation="MESNFIDWHPPDIIAGLRKKGTSMAAESRRNGLSSSTLANALSR
                     PWPKGEMIIAKALGTDPWVIWPSRYHDPQTHEFIDRTQLMRSYTKPKK"
     gene            complement(13832..15091)
                     /gene="murA"
                     /locus_tag="JNZ57_000139"
     CDS             complement(13832..15091)
                     /gene="murA"
                     /locus_tag="JNZ57_000139"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HAY8826497.1"
                     /translation="MDKFRVQGPTKLQGEVTISGAKNAALPILFAALLAEEPVEIQNV
                     PKLKDVDTSMKLLSQLGAKVERNGSVHIDARDVNVFCAPYDLVKTMRASIWALGPLVA
                     RFGQGQVSLPGGCTIGARPVDLHISGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDK
                     VSVGATVTIMCAATLAEGTTIIENAAREPEIVDTANFLITLGAKISGQGTDRIVIEGV
                     ERLGGGVYRVLPDRIETGTFLVAAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVG
                     EDWISLDMHGKRPKTVNVRTAPHPAFPTDMQAQFTLLNLVAEGTGFITETVFENRFMH
                     VPELSRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRI
                     YHIDRGYERIEDKLRALGANIKRVKGE"
     gene            complement(15146..15400)
                     /gene="ibaG"
                     /locus_tag="JNZ57_000140"
     CDS             complement(15146..15400)
                     /gene="ibaG"
                     /locus_tag="JNZ57_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015585657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family iron metabolism protein IbaG"
                     /protein_id="HAY8826498.1"
                     /translation="MENNEIQSVLMNALSLQEVHVSGDGSHFQVIAVGELFDGMSRVK
                     KQQTVYGPLMEYIADNRIHAVSIKAYTPAEWARDRKLNGF"
     gene            complement(15560..15853)
                     /gene="mlaB"
                     /locus_tag="JNZ57_000141"
     CDS             complement(15560..15853)
                     /gene="mlaB"
                     /locus_tag="JNZ57_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312097.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HAY8826499.1"
                     /translation="MSESLSWMQTGDTLALSGELDQDVLLPLWEMREEAVKGITCIDL
                     SRVSRVDTGGLALLLHLIDLAKKQGNNVTLQGVNDKVYTLAKLYNLPADVLPR"
     gene            complement(15853..16488)
                     /gene="mlaC"
                     /locus_tag="JNZ57_000142"
     CDS             complement(15853..16488)
                     /gene="mlaC"
                     /locus_tag="JNZ57_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HAY8826500.1"
                     /translation="MFKRLMMVALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKN
                     EQPQIRANPDYLRTIVDQELLPYVQVKYAGALVLGQYYKSATPAQREAYFAAFREYLK
                     QAYGQALAMYHGQTYQIAPEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGN
                     WQAYDMIAEGVSMITTKQNEWGTLLRTKGIDGLTAQLKSISQQKITLEEKK"
     gene            complement(16507..17058)
                     /gene="mlaD"
                     /locus_tag="JNZ57_000143"
     CDS             complement(16507..17058)
                     /gene="mlaD"
                     /locus_tag="JNZ57_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HAY8826501.1"
                     /translation="MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYA
                     TFDNIGGLKARSPVSIGGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIR
                     TSGLLGEQYLALNVGFEDPELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNK
                     NSGDAPAAAPGNNETTEPVGTTK"
     gene            complement(17063..17845)
                     /gene="mlaE"
                     /locus_tag="JNZ57_000144"
     CDS             complement(17063..17845)
                     /gene="mlaE"
                     /locus_tag="JNZ57_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014071945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HAY8826502.1"
                     /translation="MLLNALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLL
                     VRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPV
                     VAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTV
                     IFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISL
                     FNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFGN"
     gene            complement(17853..18662)
                     /gene="mlaF"
                     /locus_tag="JNZ57_000145"
     CDS             complement(17853..18662)
                     /gene="mlaF"
                     /locus_tag="JNZ57_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid ABC transporter ATP-binding protein
                     MlaF"
                     /protein_id="HAY8826503.1"
                     /translation="MEQSVANLVDMRDVSFTRGNRCIFDNISLTVPRGKITAIMGPSG
                     IGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNV
                     FDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIA
                     LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAWIL
                     ADKKIVAHGSAQALQANPDPRVRQFLDGIADGPVPFRYPAGDYHADLLPGS"
     gene            18872..19849
                     /locus_tag="JNZ57_000146"
     CDS             18872..19849
                     /locus_tag="JNZ57_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/sodium antiporter"
                     /protein_id="HAY8826504.1"
                     /translation="MLLATALLIVGLLLVVYSADRLVFAASILCRTFGIPPLIIGMTV
                     VSIGTSLPEIIVSLAASLHEQRDLAVGTALGSNIINILLILGLAALVRPFTVHSDVLR
                     RELPLMLLVSVVAGSVLYDGQLSRSDGIFLLFLAVLWLLFIVKLARQAERQGTDSLTR
                     EQLAELPRDGGLPVAFLWLGIALIIMPVATRMVVDNATVLANYFAISELTMGLTAIAI
                     GTSLPELATAIAGGRKGENDIAVGNIIGANIFNIVIVLGLPALITPGEIDPLAYSRDY
                     SVMLLVSIIFALLCWRRSPQRGRGVGVLLTGGFIVWLAMLYWLSPILVE"
     gene            19863..20849
                     /gene="kdsD"
                     /locus_tag="JNZ57_000147"
     CDS             19863..20849
                     /gene="kdsD"
                     /locus_tag="JNZ57_000147"
                     /EC_number="5.3.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-5-phosphate isomerase KdsD"
                     /protein_id="HAY8826505.1"
                     /translation="MSHVELQPGFDFQQAGKEVLAIERECLAELDQYINQNFTLACEK
                     MFWCKGKVVVMGMGKSGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIA
                     ISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAP
                     TSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPH
                     VKKTASLRDALLEVTRKNLGMTVICDDNMMIEGIFTDGDLRRVFDMGVDVRQLSIADV
                     MTPGGIRVRPGILAVEALNLMQSRHITSVMVADGDHLLGVLHMHDLLRAGVV"
     gene            20870..21436
                     /gene="kdsC"
                     /locus_tag="JNZ57_000148"
     CDS             20870..21436
                     /gene="kdsC"
                     /locus_tag="JNZ57_000148"
                     /EC_number="3.1.3.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate-8-phosphatase KdsC"
                     /protein_id="HAY8826506.1"
                     /translation="MSKAGASLATCYGPVSADVIAKAENIRLLILDVDGVLSDGLIYM
                     GNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNK
                     LIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIA
                     GGCGAVREVCDLLLLAQGKLDEAKGQSI"
     gene            21433..22008
                     /gene="lptC"
                     /locus_tag="JNZ57_000149"
     CDS             21433..22008
                     /gene="lptC"
                     /locus_tag="JNZ57_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HAY8826507.1"
                     /translation="MSKARRWVIIVLSLAVLVMIGINMAEKDDTAQVVVNNNDPTYKS
                     EHTDTLVYNPEGALSYRLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAK
                     LTNDRMLYLYGHVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSG
                     LKIRGNLRSKNAELIEKVRTSYEIQNKQTQP"
     gene            21977..22534
                     /gene="lptA"
                     /locus_tag="JNZ57_000150"
     CDS             21977..22534
                     /gene="lptA"
                     /locus_tag="JNZ57_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide ABC transporter
                     substrate-binding protein LptA"
                     /protein_id="HAY8826508.1"
                     /translation="MKFKTNKLSLNLVLASSLLAASIPAFAVTGDTDQPIHIESDQQS
                     LDMQGNVVTFTGNVIVTQGTIKINADKVVVTRPGGEQGKEVIDGYGKPATFYQMQDNG
                     KPVEGHASQMHYELAKDFVVLTGNAYLQQVDSNIKGDKITYLVKEQKMQAFSDKGKRV
                     TTVLVPSQLQDKNNKGQTPAQKKGN"
     gene            22541..23266
                     /gene="lptB"
                     /locus_tag="JNZ57_000151"
     CDS             22541..23266
                     /gene="lptB"
                     /locus_tag="JNZ57_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004091254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HAY8826509.1"
                     /translation="MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTT
                     TFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAV
                     LQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFIL
                     LDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAH
                     GTPTEILQDEHVKRVYLGEDFRL"
     gene            23314..24747
                     /gene="rpoN"
                     /locus_tag="JNZ57_000152"
     CDS             23314..24747
                     /gene="rpoN"
                     /locus_tag="JNZ57_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HAY8826510.1"
                     /translation="MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESN
                     PLLEQIDTHEEIDTRETQDSETLDTADALEQKEMPEELPLDASWDTIYTAGTPSGTSG
                     DYIDDELPVYQGETTQTLQDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVPLED
                     ILESMGDEEIDIDEVEAVLKRIQRFDPVGVAAKDLRDCLLIQLSQFDKTTPWLEEARL
                     IISDHLDLLANHDFRTLMRVTRLKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDV
                     LVRKHNGHWTVELNSDSIPRLQINQHYASMCNNARNDGDSQFIRSNLQDAKWLIKSLE
                     SRNDTLLRVSRCIVEQQQAFFEQGEEYMKPMVLADIAQAVEMHESTISRVTTQKYLHS
                     PRGIFELKYFFSSHVNTEGGGEASSTAIRALVKKLIAAENPAKPLSDSKLTSLLSEQG
                     IMVARRTVAKYRESLSIPPSNQRKQLV"
     gene            24770..25057
                     /gene="hpf"
                     /locus_tag="JNZ57_000153"
     CDS             24770..25057
                     /gene="hpf"
                     /locus_tag="JNZ57_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007369896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome hibernation promoting factor"
                     /protein_id="HAY8826511.1"
                     /translation="MQLNITGNHVEITEALREFVRAKFAKLEQYFDRINQVYVVLKVE
                     KVTHTSDATLHVNGGEIHASAEGQDMYAAIDGLIDKLARQLTKHKDKLKQH"
     gene            25175..25666
                     /gene="ptsN"
                     /locus_tag="JNZ57_000154"
     CDS             25175..25666
                     /gene="ptsN"
                     /locus_tag="JNZ57_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HAY8826512.1"
                     /translation="MTNNDTTLQLSSVLNRECTRSRVHCQSKKRALEIISELAAKQLS
                     LPPQVVFEAILTREKMGSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQ
                     PVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDTEGTP
                     DEA"
     gene            25712..26566
                     /gene="rapZ"
                     /locus_tag="JNZ57_000155"
     CDS             25712..26566
                     /gene="rapZ"
                     /locus_tag="JNZ57_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HAY8826513.1"
                     /translation="MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARSL
                     ADREISAAVSIDVRNMPESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRL
                     HPLSSKNLSLESAIDKESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKREREL
                     TMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNF
                     IYQTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRH
                     RTLEKRKP"
     gene            26563..26835
                     /gene="npr"
                     /locus_tag="JNZ57_000156"
     CDS             26563..26835
                     /gene="npr"
                     /locus_tag="JNZ57_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000216792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS phosphocarrier protein NPr"
                     /protein_id="HAY8826514.1"
                     /translation="MTVKQTVEITNKLGMHARPAMKLFELMQGFDAEVLLRNDEGTEA
                     EANSVIALLMLDSAKGRQIEVEATGPQEEEALAAVIALFNSGFDED"
     gene            27049..27699
                     /gene="yrbL"
                     /locus_tag="JNZ57_000157"
     CDS             27049..27699
                     /gene="yrbL"
                     /locus_tag="JNZ57_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoP regulatory network protein YrbL"
                     /protein_id="HAY8826515.1"
                     /translation="MIRLSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDGGDG
                     GDKEIRRELKYYAHLGRRLKDWSGIPRYHGTVETDCGTGYVYDVIADFDGKPSITLTE
                     FAEQCRYEEDIAQLRQRLKQLKRYLQDNRIVTMSLKPQNILCHHISESEVIPVVCDNI
                     GESTLIPLATWSKWCCLRKQERLWKRFIAQPALAIALQKDLQPRESKTLALTSREA"
     gene            complement(27696..28424)
                     /gene="mtgA"
                     /locus_tag="JNZ57_000158"
                     /pseudo
     CDS             complement(27696..28424)
                     /gene="mtgA"
                     /locus_tag="JNZ57_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417675.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
     gene            complement(28421..29074)
                     /gene="elbB"
                     /locus_tag="JNZ57_000159"
     CDS             complement(28421..29074)
                     /gene="elbB"
                     /locus_tag="JNZ57_000159"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709007.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenoid biosynthesis glyoxalase ElbB"
                     /protein_id="HAY8826516.1"
                     /translation="MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQ
                     QVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAAKNLS
                     NFATLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKIFDFPLRLTIGTDIDTA
                     EVLEEMGAEHVPCPVDDIVVDEDNKIVTTPAYMLAQNIAEAASGIDKLVSRVLVLAE"
     gene            complement(29304..31640)
                     /gene="arcB"
                     /locus_tag="JNZ57_000160"
     CDS             complement(29304..31640)
                     /gene="arcB"
                     /locus_tag="JNZ57_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobic respiration two-component sensor
                     histidine kinase ArcB"
                     /protein_id="HAY8826517.1"
                     /translation="MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTM
                     VLHGQVESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRERDL
                     SLNVQLKDNIAQLNQEIAVREKAEAELQETFGQLKIEIKEREETQIQLEQQSSFLRSF
                     LDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHLKPADVYSPEAAAKVIETDEK
                     VFRHNVSLTYEQWLDYPDGRKACFEIRKVPYYDRVGKRHGLMGFGRDITERKRYQDAL
                     ERASRDKTTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNI
                     FNDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQV
                     ITDGTRLRQILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKI
                     FAMYYQVKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAPSV
                     AEEVDDAFDEDDMPLPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFK
                     PGEYDLVLLDIQLPDMTGLDISRELTKRYPREDLPPLVALTANVLKDKQEYLNAGMDD
                     VLSKPLSVPALTAMIKKFWDTQDDEESTVTTEENSKSEALLDIPMLEQYLELVGPKLI
                     TDGLAVFEKMMPGYVSVLESNLTAQDKKGIVEEGHKIKGAAGSVGLRHLQQLGQQIQS
                     PDLPAWEDNVGEWIEEMKEEWRHDVEVLKAWVAKATKK"
     gene            complement(31736..32665)
                     /locus_tag="JNZ57_000161"
     CDS             complement(31736..32665)
                     /locus_tag="JNZ57_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional siderophore receptor/adhesin Iha"
                     /protein_id="HAY8826518.1"
                     /translation="MQLQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGG
                     CTFCNVASFADEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQ
                     QAVSQANIVGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRG
                     HDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPLHI
                     VKGSIMAKAWEAGRLNGIEQEDYTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWC
                     ENRWTGMVELDRYLNEHGVQGSALGRPWLPPTE"
     gene            33340..37800
                     /gene="gltB"
                     /locus_tag="JNZ57_000162"
     CDS             33340..37800
                     /gene="gltB"
                     /locus_tag="JNZ57_000162"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HAY8826519.1"
                     /translation="MLYDKSLERDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGA
                     ILADGKTGDGCGLLLQKPDRFFRIVAQERGWRLAKNYAVGMLFLNKDPELAAAARRIV
                     EEELQRETLSIVGWRDVPTNEGVLGEIALSSLPRIEQIFVNAPAGWRPRDMERRLFIA
                     RRRIEKRLEADKDFYVCSLSNLVNIYKGLCMPADLPRFYLDLADLRLESAICLFHQRF
                     STNTVPRWPLAQPFRYLAHNGEINTITGNRQWARARTYKFQTPLIPDLHDAAPFVNET
                     GSDSSSMDNMLELLLAGGMDIIRAMRLLVPPAWQNNPDMDPELRAFFDFNSMHMEPWD
                     GPAGIVMSDGRFAACNLDRNGLRPARYVITKDKLITCASEVGIWDYQPDEVVEKGRVG
                     PGELMVIDTRSGRILHSAETDDDLKSRHPYKEWMEKNVRRLVPFEDLPDEEVGSRELD
                     DDTLASYQKQFNYSAEELDSVIRVLGENGQEAVGSMGDDTPFAVLSSQPRIIYDYFRQ
                     QFAQVTNPPIDPLREAHVMSLATSIGREMNVFCEAEGQAHRLSFKSPILLYSDFKQLT
                     TMKEEHYRADTLDITFDVTKTTLEATVKELCDKAEKMVRSGTVLLVLSDRNIAKDRLP
                     VPAPMAVGAIQTRLVDQSLRCDANIIVETASARDPHHFAVLLGFGATAIYPYLAYETL
                     GRLVDTHAIAKDYRTVMLNYRNGINKGLYKIMSKMGISTIASYRCSKLFEAVGLHDDV
                     VGLCFQGTVSRIGGASFEDFQQDLLNLSKRAWLARKPISQGGLLKYVHGGEYHAYNPD
                     VVRTLQQAVQSGEYSDYQEYAKLVNERPATTLRDLLAITPGENAVNIADVEPASELFK
                     RFDTAAMSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARYGTNKVSRIKQVASGR
                     FGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHH
                     DIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGT
                     GASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAE
                     SFGFGTGPMVALGCKYLRICHLNNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARE
                     TRELMAQLGVTRLVDLIGRTDLLKELDGFTAKQQKLALSKLLETAEPHLGKALYCTEN
                     NPPFDNGLLNAQLLQQAKPFVDGRQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQGLA
                     ADPIKAYFNGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLIAIRPPVGSAFRSH
                     EASIIGNTCLYGATGGRLYAAGRAGERFGVRNSGAITVVEGIGDNGCEYMTGGIVCIL
                     GKTGVNFGAGMTGGFAYVLDESGDFRKRVNPELVEVLNVDDLAIHEEHLRGLITEHVQ
                     HTGSQRGEEILANWSTFATKFALVKPKSSDVKALLGHRSRSAAELRVQAQ"
     gene            37813..39231
                     /locus_tag="JNZ57_000163"
     CDS             37813..39231
                     /locus_tag="JNZ57_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001540975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase"
                     /protein_id="HAY8826520.1"
                     /translation="MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEPFSEGQAKAQA
                     DRCLSCGNPYCEWKCPVHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDR
                     LCEGSCTLNDEFGAVTIGNIERYINDKAFEMGWRPDMSGVKQTGKKVAIIGAGPAGLA
                     CADVLTRNGVKAVVFDRHPEIGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTE
                     VGRDVQLDDLLSDYDAVFLGVGTYQSMRGGLENEDADGVYAALPFLIANTKQLMGFGE
                     TRDEPFVSMEGKRVVVLGGGDTAMDCVRTSVRQGAKHVTCAYRRDEENMPGSRREVKN
                     AREEGVEFKFNVQPLGIEVNGNGKVSGVKMVRTEMGEPDAKGRRRAEIVAGSEHIVPA
                     DAVIMAFGFRPHNMEWLAKHSVELDSQGRIIAPEGSDNAFQTSNPKIFAGGDIVRGSD
                     LVVTAIAEGRKAADGIMNWLEV"
     gene            39415..39894
                     /locus_tag="JNZ57_000164"
     CDS             39415..39894
                     /locus_tag="JNZ57_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001613919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HAY8826521.1"
                     /translation="MESLSERTSTGYQQIHDGIIHLVDSARTETVRSVNALMTATYWE
                     IGRRIVEFEQGGEARAAYGAQLIKRLSKDLSLRYKRGFSAKNLRQMRLFYLFFQHVEI
                     RQTVSGELTPLGIPQTPSAEFPSAKIWQTLSAKLRGCLIFPQLLYCISYFRFVYSCK"
     gene            39911..40216
                     /locus_tag="JNZ57_000165"
     CDS             39911..40216
                     /locus_tag="JNZ57_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8826522.1"
                     /translation="MIYIEQLELIHKSGDVLYPVKITRKSSGKTAFHLVPFGLNKTHD
                     LLEVEDASEAIRLVIDERHSIRCSTLTATITNKKGKRIKRTGIYSIKGVNIKEYNVR"
     gene            complement(40292..40756)
                     /locus_tag="JNZ57_000166"
     CDS             complement(40292..40756)
                     /locus_tag="JNZ57_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF386 domain-containing protein"
                     /protein_id="HAY8826523.1"
                     /translation="MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDN
                     IFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQ
                     LCSTIDNEQAIILKPGMFAVFMPSEPHKPGCVVGEPGEIKKVVVKVKADLMA"
     gene            complement(40753..41628)
                     /locus_tag="JNZ57_000167"
     CDS             complement(40753..41628)
                     /locus_tag="JNZ57_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312122.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine kinase"
                     /protein_id="HAY8826524.1"
                     /translation="MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPQALRDA
                     LAALVAPLQAHAQQVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLSNLPTIA
                     INDAQAAAWAEYQALEGDITDMVFITVSTGVGGGVVSGGKLLTGPSGLAGHIGHTLAD
                     PHGPVCGCGRTGCVEAIASGRGIAAAAQGELMGADARTIFTRAGQGDEQAQQLIHRSA
                     HVLARLIADIKATTDCQCVVVGGSVGLAEGYLALVKTYLAQEPAAFHVDLLAAHYRHD
                     AGLLGAALLAQGEKL"
     gene            complement(41625..42314)
                     /locus_tag="JNZ57_000168"
     CDS             complement(41625..42314)
                     /locus_tag="JNZ57_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HAY8826525.1"
                     /translation="MSLLAQLDQKIAANGGLIVSCQPVPDSPLDKPEIVAAMALAAEQ
                     AGAVAIRIEGVANLQATRAVVSVPIIGIVKRDLEDSPVRITAYIEDVDALAQAGADII
                     AIDGTDRPRPVPVETLLARIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSGYTTP
                     ETPEEPDLALVKTLSDAGCRVIAEGRYNTPAQAADAMRHGAWAVTVGSAITRLEHICQ
                     WYNTAMKKAVL"
     gene            complement(42362..43852)
                     /gene="nanT"
                     /locus_tag="JNZ57_000169"
     CDS             complement(42362..43852)
                     /gene="nanT"
                     /locus_tag="JNZ57_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312124.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialic acid transporter NanT"
                     /protein_id="HAY8826526.1"
                     /translation="MSTTTQNIPWYRHLNRAQWRAFSAAWLGYLLDGFDFVLIALVLT
                     EVQGEFGLTTVQAASLISAAFISRWFGGLMLGAMGDRYGRRLAMVTSIVLFSAGTLAC
                     GFAPGYITMFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSVGAVVA
                     AQVYSLVVPVWGWRALFFIGILPIIFALWLRKNIPEAEDWKEKHAGKAPVRTMVDILY
                     RGEHRIANIVMTLAAATALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSTGKRWPT
                     GVMLMVVVLFAFLYSWPIQALLPTYLKTDLAYNPHTVANVLFFSGFGAAVGCCVGGFL
                     GDWLGTRKAYVCSLLASQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGIAGILPKLIG
                     GYFDTDQRAAGLGFTYNVGALGGALAPIIGALIAQRLDLGTALASLSFSLTFVVILLI
                     GLDMPSRVQRWLRPEALRTHDAIDGKPFSGAVPFGSAKNDLVKTKS"
     gene            complement(43961..44854)
                     /gene="nanA"
                     /locus_tag="JNZ57_000170"
     CDS             complement(43961..44854)
                     /gene="nanA"
                     /locus_tag="JNZ57_000170"
                     /EC_number="4.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate lyase"
                     /protein_id="HAY8826527.1"
                     /translation="MATNLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYV
                     GGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDA
                     VSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPG
                     VGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQ
                     GIVKALKEGDIQTAQKLQTECNKVIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGP
                     VDEKYLPELKALAQQLMQERG"
     gene            complement(44976..45767)
                     /gene="nanR"
                     /locus_tag="JNZ57_000171"
     CDS             complement(44976..45767)
                     /gene="nanR"
                     /locus_tag="JNZ57_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417693.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NanR"
                     /protein_id="HAY8826528.1"
                     /translation="MGLMNAFDSQTEDSSPAIGRNLRSRPLARKKLSEMVEEELEQMI
                     RRREFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADT
                     IIGELSGMAKDFLSHPGGIAHFEQLRLFFESSLVRYAAEHATDEQIDLLAKALEINSQ
                     SLDNNAAFIRSDVDFHRVLAEIPGNPIFMAIHVALLDWLIAARPTVTDQALHEHNNVS
                     YQQHIAIVDAIRRHDPDEADRALQSHLNSVSATWHAFGQTTNKKK"
     gene            46147..47513
                     /gene="dcuC"
                     /locus_tag="JNZ57_000172"
                     /pseudo
     CDS             46147..47513
                     /gene="dcuC"
                     /locus_tag="JNZ57_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417694.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuC"
     gene            complement(47556..48053)
                     /gene="sspB"
                     /locus_tag="JNZ57_000173"
     CDS             complement(47556..48053)
                     /gene="sspB"
                     /locus_tag="JNZ57_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HAY8826529.1"
                     /translation="MDLSQLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPME
                     YARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGT
                     MFEPEAAYDEDTSIMNDEEASADNETVMSVIDGDKPDHDDDTHPDDEPPQPPRGGRPT
                     LRVVK"
     gene            complement(48059..48697)
                     /gene="sspA"
                     /locus_tag="JNZ57_000174"
     CDS             complement(48059..48697)
                     /gene="sspA"
                     /locus_tag="JNZ57_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stringent starvation protein A"
                     /protein_id="HAY8826530.1"
                     /translation="MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKD
                     NPPQDLIDLNPNQSVPTLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLY
                     MHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCY
                     LAPLLWRLPQLGIEFSGPGAKELKGYMTRVFERDSFLASLTEAEREMRLGRS"
     gene            complement(49092..49484)
                     /gene="rpsI"
                     /locus_tag="JNZ57_000175"
     CDS             complement(49092..49484)
                     /gene="rpsI"
                     /locus_tag="JNZ57_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000829824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HAY8826531.1"
                     /translation="MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETA
                     RMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAG
                     FVTRDARQVERKKVGLRKARRRPQFSKR"
     gene            complement(49500..49928)
                     /gene="rplM"
                     /locus_tag="JNZ57_000176"
     CDS             complement(49500..49928)
                     /gene="rplM"
                     /locus_tag="JNZ57_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HAY8826532.1"
                     /translation="MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEY
                     TPHVDTGDYIIVLNADKVAVTGNKCTDKVYYHHTGHIGGIKQATFEEMIARRPERVIE
                     IAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI"
     gene            complement(50146..51273)
                     /locus_tag="JNZ57_000177"
     CDS             complement(50146..51273)
                     /locus_tag="JNZ57_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HAY8826533.1"
                     /translation="MQSVTPTSQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSRP
                     PAPRTSGLMARVGKLWGKREDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQR
                     LHFHRFMLRVHEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLM
                     KALFARGITLVATSNIPPDELYRNGLQRARFLPAIDAIKQHCDVMNVDAGVDYRLRTL
                     TQAHLWLSPLHDETRAQMDKLWLALAGAKRENSPTLEINHRPLATMGAENQTLAVSFT
                     TLCVDARSQHDYIALSRLFHTVMLFDVPVMTRLMESEARRFIALVDEFYERHVKLVVS
                     AEVPLYEIYQGDRLKFEFQRCLSRLQEMQSEEYLKREHLAG"
     gene            51467..51865
                     /locus_tag="JNZ57_000178"
     CDS             51467..51865
                     /locus_tag="JNZ57_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1043 family protein"
                     /protein_id="HAY8826534.1"
                     /translation="MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAE
                     LDEYREELVSHFARSAELLDTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAES
                     EASNDQAPVQMPRDYSEGASGLLRTGAKRD"
     gene            52019..53386
                     /gene="degQ"
                     /locus_tag="JNZ57_000179"
     CDS             52019..53386
                     /gene="degQ"
                     /locus_tag="JNZ57_000179"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endoprotease DegQ"
                     /protein_id="HAY8826535.1"
                     /translation="MKKQTQLLSALALSVGLTLSASFQAVASIPGQVADQAPLPSLAP
                     MLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKG
                     YVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSD
                     KLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDASINRGNSGGAL
                     LNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEM
                     SADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIAT
                     TEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSASAEMITPALEGATLSDGQLKDGGKGI
                     KIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLAAKPAIIALQIVRGNESI
                     YLLMR"
     gene            53476..54543
                     /gene="degS"
                     /locus_tag="JNZ57_000180"
     CDS             53476..54543
                     /gene="degS"
                     /locus_tag="JNZ57_000180"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane-stress sensor serine
                     endopeptidase DegS"
                     /protein_id="HAY8826536.1"
                     /translation="MFVKLLRSVAIGLIVGAILLVAMPSLRSLNPLSTPQFDSTDETP
                     ASYNLAVRRAAPAVVNVYNRGVNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD
                     QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGN
                     PYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTL
                     SFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQSGGI
                     DQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV
                     VMRDDKQLTLQVTIQEYPATN"
     gene            complement(54606..55544)
                     /gene="mdh"
                     /locus_tag="JNZ57_000181"
     CDS             complement(54606..55544)
                     /gene="mdh"
                     /locus_tag="JNZ57_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000861594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HAY8826537.1"
                     /translation="MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAV
                     DLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLV
                     QQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAE
                     LKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKA
                     GGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVE
                     ERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK"
     gene            55979..56449
                     /gene="argR"
                     /locus_tag="JNZ57_000182"
     CDS             55979..56449
                     /gene="argR"
                     /locus_tag="JNZ57_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001257852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ArgR"
                     /protein_id="HAY8826538.1"
                     /translation="MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQS
                     KVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSP
                     GAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPANGFTVKDLYEAILELFDQEL"
     gene            56814..57077
                     /gene="yhcN"
                     /locus_tag="JNZ57_000183"
     CDS             56814..57077
                     /gene="yhcN"
                     /locus_tag="JNZ57_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417705.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide/acid stress response protein YhcN"
                     /protein_id="HAY8826539.1"
                     /translation="MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSG
                     VASSPMDMREMLNKKAEEKGATAYQITEARSGDTWHATAELYK"
     gene            complement(57132..57404)
                     /locus_tag="JNZ57_000184"
     CDS             complement(57132..57404)
                     /locus_tag="JNZ57_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8826540.1"
                     /translation="MNIYTFDFDEIESQEDFYRDFSQTFGLAKDKVRDLDSLWDVLMN
                     DVLPLPLEIEFVHLGEKTRRRFGALILLFDEAEKELEGHLRFNVRH"
     gene            complement(57496..59463)
                     /gene="aaeB"
                     /locus_tag="JNZ57_000185"
     CDS             complement(57496..59463)
                     /gene="aaeB"
                     /locus_tag="JNZ57_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="p-hydroxybenzoic acid efflux pump subunit AaeB"
                     /protein_id="HAY8826541.1"
                     /translation="MGIFSIANQHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAA
                     IVAAGPAFAAGGEPYSGAIRYRGFLRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIW
                     AGFCTWISSLVRIENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCA
                     IMADLLFSPRSIKQEVDRELESLLVAQYQLMQLCIKHGDGEVVDKAWGDLVRRTTALQ
                     GMRSNLNMESSRWARANRRLKAINTLSLTLITQSCETYLIQNTRPELITDTFREFFDT
                     PVETAQDVHKQLKRLRRVIAWTGERETPVTIYSWVAAATRYQLLKRGVISNTKINATE
                     EEILQGEPEVKVESAERHHAMVNFWRTTLSCILGTLFWLWTGWTSGSGAMVMIAVVTS
                     LAMRLPNPRMVAIDFIYGTLAALPLGLLYFLVIIPNTQQSMLLLCISLAVLGFFLGIE
                     VQQRRLGSMGALASTINIIVLDNPMTFHFSQFLDSALGQIVGCVLAFTVILLVRDKSR
                     DRTGRVLLNQFVSAAVSAMTTNVARRKENHLPALYQQLFLLMNKFPGDLPKFRLALTM
                     IIAHQRLRDAPIPVNEDLSAFHRQMRRTADHVISARSDDKRRRYFGQLLEELEIYQEK
                     LRIWQAPPQVTEPVHRLAGMLHKYQHALTDS"
     gene            complement(59469..60401)
                     /gene="aaeA"
                     /locus_tag="JNZ57_000186"
                     /pseudo
     CDS             complement(59469..60401)
                     /gene="aaeA"
                     /locus_tag="JNZ57_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417708.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="p-hydroxybenzoic acid efflux pump subunit AaeA"
     gene            complement(60409..60612)
                     /locus_tag="JNZ57_000187"
     CDS             complement(60409..60612)
                     /locus_tag="JNZ57_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000051842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AaeX family protein"
                     /protein_id="HAY8826542.1"
                     /translation="MSLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRVLVPTGIYDFV
                     WHPALFNTALYCCLFYLISRLFV"
BASE COUNT        15124 a        16229 c        15057 g        14401 t
ORIGIN      
        1 ggcacataga taagggatat acatccccag cattttgaca acttcatccg gatcactctg
       61 gagcacacta atcgcaaatc catcattgaa agttgtacca aaggtacacc atgaatagag
      121 gctaatactc atgtctgccg cagtcagtaa cacaaatggt gcggcaacaa gcaggcgaag
      181 cggaagggat gatatacgtt ttacaaccag gatggtcagg acgaagaaca gcaatcgctg
      241 aaccatatgc gcgccggaag aggcgactaa gttcgtaata ccaaaaacaa taacacaaag
      301 atacaacaac caatgagatt taaaacttct agcaaatttg ttgaatactg tcatccagaa
      361 atccaagttc acaaccaata taaacaatta tcaacaatgt tcaattttat atcagacatg
      421 tttttcaact ctgatccata tcagaccgaa acactgttag ttttttcttt ttaaatgatg
      481 cggccattgc gttctcagta attaaataac attatcaatg cgtctctaaa cattacgcag
      541 aacgtagcca tcagtagtta tactgacagg agcaggatgg tttatcgaga agtaaacata
      601 tccgtattcg taccggaact ggagttgaca caataaagtg ccaattatgt cagcagaagg
      661 gaaaagttta taactaaggc gtaccggcac catcgtttca aggtaccagc tacgagtaaa
      721 gcaactggac gagatacaga tacctgacaa ccattcctca gaccaggacc aaaacgaaaa
      781 aagacgcttt tcagcgtccc ttttctggaa tttggtaccg aggacgggac ttgaacccgt
      841 aagccctatt gggcactacc acctcaaggt agcgtgtcta ccaattccac cacctcggca
      901 cggatactac tttttagttc gggatatcgc tggtcggctt agccggagca gctggttgag
      961 tttgttcggt tttcgccggt gcactcagat tttcccattc gctaccttta ttggttttgt
     1021 tgctattgat gttacccagc accagactga tgatgaagaa taacgttgcc agcagcgccg
     1081 tcatgcgggt catgaagtta ccagaaccac ttgaaccaaa cagcgtagcg gaagcgcctg
     1141 ctccgaagga ggctcccata tcagcgcctt taccttgctg cagcatgatc agaccaacaa
     1201 ggccaattgc cacaataagg aaaactacca aaagagcttc gtacataatc aacctgttcc
     1261 ttgcggagtt gccgcgtacc aatgcttcaa ccaataaagc gggagttttt aatctttccc
     1321 actgaagcgg gtgtgaatac taaccaaagc gaatgacctt cgcaagggca attttatcgc
     1381 attgtatcaa ctgcggaaaa aaacagcaaa accgatgtgt tcgctgagaa aaaaggcgac
     1441 aatcgccgcc tttttagcca gtcatttatc gttttaaacg gcttttactg catcggcgat
     1501 gcggtgtgca aattcagtca cctgcgcttc gtcttcgcct tccaccatca cgcgaattaa
     1561 cggttcggtg ccggatttac gcagcaacac gcgtccacgg ttgcccagcg cagcttcaac
     1621 ctctgcggtc acggctttaa ctgactcatg ctcaagcgga tcgccgctac ctgcggtgta
     1681 acgcacgtta accagaatct gcgggaacat tttcatgccg ctgcaaaggt cgtgcaggct
     1741 catatggtta cgtgccatcg ccgccagcac ctgcaagcca gcaacgatgc cgtcaccggt
     1801 agtggtttta tccagcagga tcacatgacc ggaattctct gcaccgatac gccagccttt
     1861 ctcctgcatt ttttccagta cgtagcggtc acccactttc gcgcgcgcaa atggaatacc
     1921 taactgtttc agcgccagct caagccccat gttactcatc aatgtaccca cagcaccacc
     1981 acgcagctgg ccctgacgaa gaccttcacg cgcgatgata tacatgatct gatcaccatc
     2041 gactttattg ccttcatggt caaccataat cacgcgatcg ccgtcgccgt cgaaggcaat
     2101 accgagatcc gctttttcag ccagcacacg agcctggagc gcgcgaacgt cggtagcccc
     2161 cacttcggca ttgatgttta caccgttcgg ctcacaaccg atagcgataa cgttcgcccc
     2221 cagttcacgc agcacgttcg gcgcgatgtg ataagtcgca ccgtttgcgc aatccaccac
     2281 aatcttcagt tcgctgaggc taagttcgtt cgggaacgtg gctttgcaaa actcgatata
     2341 gcgacccgca gcatcaacga tacggctggc tttacccagt tctgccgaat caacacagct
     2401 gatctctttt tccatttccg cttcgatggc ctcttctacc gcatccggta gtttggtgcc
     2461 gtcgatagag aaaaatttaa tgccattatc gtagaacggg ttatgcgatg cagatatcac
     2521 aattccggcc tctgcgcgga aggtacgcgt cagataagcc acggccggtg ttggcatcgg
     2581 gccagtgaag agtgcggaaa ggcccgctgc cgccataccc gcttccagtg ctgactccag
     2641 catatagcca gaaatacgcg tgtctttacc aataatgatc ttacgggagc cgtggcgcgc
     2701 cagcacttta cccgcggccc aacccagctt aagcacaaaa tcaggtgtga tcggcgcatc
     2761 ccctacacga ccacgaatcc catcggtacc gaaatattta cgattactca tagcgtttgt
     2821 tttcctttgc agacagagtg gcttccacca cccgcatcgc ttctacggtt tctttgacgt
     2881 catgaacacg aataatgtgc gcgccttgca ttgcggcaat gaccgcacag gccagactac
     2941 cgctcaggcg ctcggacggc cccacgttca gcagctgccc aatcatcgat tttcgtgaca
     3001 tacctaccaa cagcggcagg ttgaaatggt gaaattcagc caggcgcgcc agtaatgaat
     3061 agttatggga gagattttta ccgaaaccga atccggggtc gagcaacaat ttctcttttg
     3121 cgatacccgc ctgctcgcaa cgtgctattt gctcaataaa gtagcgattc acttctgcaa
     3181 agacatcgtc atacttcgga gcttcctgca tggtttttgg atttccctgc atatgcatca
     3241 gacaaaccgg taaaccggtt tctgccgccg cctccagagc gccaggttcg gaaagggagc
     3301 ggatatcgtt aataatgtga gcgccaactt tcgctgactc acggatgact tctggtttgg
     3361 atgtatctac cgagagccag acttcgaagc gttgagcaat tgcctcaacc acaggaataa
     3421 cacgttgcaa ctcttcttca acgctaactt ccgccgcccc tgggcgcgtg gactcgccac
     3481 caacgtcaat gatcgtcgcg ccagcgttga tcatcagatt cgcatgtttc accgcatcta
     3541 tcagcgagtt atgcgtgcca ccatccgaaa aggaatcagg cgtgacgttg aggatcccca
     3601 ttacgtgagg atggctaagg tccagtgaag tgccctgggc aaagagtttc atggtgttat
     3661 ccctggtatg aattgataag aaaaaacccc ggagcacgcc ccggggtttt cggtacaaat
     3721 acagtcatct gatgcgggaa cttacttgtc gcctaactgc tctgacatgg tgttacccgg
     3781 gttcggcgta cgcggttcat caaccggacg aggagccttt ggactaccat tgtcgccaga
     3841 attgttagaa gcgcctggtt cttcccagcc cgctggcgga cgtacatcgc gacgtgccat
     3901 caggtcatca atctgcggtg cgtcgatagt ctcatatttc atgagagcat ctttcatcgc
     3961 atgcagaata tccatattgt cggtcagaag ctgacgcgca cgattatagt tacgctcaat
     4021 cagtgctttc acttcctggt cgatgatacg tgcagtttca tcggacatat gtttcgcttt
     4081 tgctacgcta cggccgagga acacttcacc ttcttcttcc gcgtacagca gtggacccaa
     4141 tttctcagag aagccccact gagtcaccat gttacgcgcc aggttggtcg caactttaat
     4201 atcgttggac gcaccggtag aaacatgttc cggcccgtag atgatctctt ctgccagacg
     4261 accaccgtac agcgtagaaa tctggctttc cagtttctga cggctggcgc tgattgcgtc
     4321 gccctcaggc aagaagaaag tcacacccag cgcacgaccg cgtgggataa tcgtcacttt
     4381 gtgcaccgga tcgtgttccg gcaccaggcg accgataatc gcatgacccg cttcgtggta
     4441 agccgtcgat tctttctgcg cttccgtcat caccatggag cgacgttccg cacccatcat
     4501 gattttatct ttcgcttttt cgaactcaat catcgacaca acgcgtttgt tgccacgagc
     4561 agcgaacagt gccgcttcgt ttaccaggtt cgccaggtca gcaccggaga aactaggagt
     4621 accacgggca atgattgccg cgtcgatatc gggtgccaat ggtacgcgac gcatgtgaac
     4681 tttcaggatc tgctcacgac cgcgaacatc tggcaagcca accacaacct gacggtcgaa
     4741 acggccagga cgcagcaggg ccgggtcaag aacgtccgga cggttagtcg cggcgataac
     4801 gatgatacct tcgttacctt cgaagccatc catctcaacc agcatctggt tcagagtctg
     4861 ttcacgttca tcgtgaccac cgcccagacc agcgccacgc tggcggccta cggcgtcgat
     4921 ttcatcgata aagatgatgc acggtgccgc tttcttcgcc tgttcgaaca tgtcacgaac
     4981 acgggatgca cccacaccga cgaacatttc tacgaagtca gaaccggaga tagtaaagaa
     5041 cggaactttc gcttcgcctg caatcgcttt cgccagcaac gttttaccgg tacccggagg
     5101 accgaccatc aggacgcctt tcgggatctt accgccgagt ttctggaagc ggctcggctc
     5161 gcgcagatac tctaccagtt cagcaacttc ttcttttgct tcgtcgcagc ccgcaacgtc
     5221 agcaaaggtc gttttgatct gatcttccgt cagcatgcgc gctttgctct taccaaacga
     5281 catggcacct ttgccaccgc cgccctgcat ttgacgcatg aagaagatcc agacaccaat
     5341 cagcaacagc atcgggaacc aagagatgaa gatagaagcc agcaggcttg gttcttcagg
     5401 cggttcaccg acaaccttga cgttcttggt caacaggtta tccagtaatt tcggatcctg
     5461 aaccggaatg taagtggtat aacggttact atctttcttg gtaacgttga tttcacgtcc
     5521 gttgatacgc gcttcacgaa cctggtcgtt attgacctct tgtaggaagg tagagtaatc
     5581 caccttacgg ccattagact cgctgggccc aaagctctgg aatactgaca tcagcacaac
     5641 ggcaatgacc agccagagta ttaggttttt cgccatgtca ctcaagggat taacctctta
     5701 ttacaactgt gttaaaaaca gcgtcaggat actctatatc cagcatcttt caaactttcg
     5761 tctgaaatct cccggttagg gtttacgccc ggtcgctaca atatacactt cccgcgaacg
     5821 tgcacgagaa gagtccggct tacgaacttt gaccttcgta aacagggagc gaatttccct
     5881 tagatactca tcgaaacctt cgccctggaa caccttcact acaaaactgc cacctggcgc
     5941 taatacatca cgacacattt ctaacgccag ttccaccaga tacatggcac gggggatatc
     6001 caccgccggt gttccgctca tgtttggtgc catatcggac atgacaacct ggactttgct
     6061 gtcgccaacg cgctccagca gtgctttcat caccagttca tcacgaaaat cgccctgaag
     6121 aaagtccaca ccaacgatag gatccatagg taaaagatcg caagcgatga tgcggccttt
     6181 gccgccaatt tgggtgacca catattgtga ccaaccaccc ggagcagcac caaggtcgac
     6241 aaccgtcatt cccggtttaa agagtttgtc actttgctgt atttcatcaa gtttaaacca
     6301 ggcacgggaa cgtaacccct ttttctgtgc ctgttgaaca tatttatcgc taaagtgttc
     6361 ctgaagccag cggctggagc tggcagaacg cttcttacct gtcatttaac tttcccatgg
     6421 ggataactca tcgtaaccaa ttgcgtaaat ttttacgcgc ctatttggtg atatatggga
     6481 gatggcggta gaatgacccg ttttcaatcc caacgtaagc aaaaaatacg atgaatctga
     6541 gtactaaaca aaaacagcac ctgaaaggtc tggcacatcc gctcaagcca gttgttctgc
     6601 ttggcagtaa tggtttgacc gaaggggtgc tggccgagat tgaacaagcg ttagagcacc
     6661 atgaactcat caaggtgaaa atcgccaccg aagatcgcga aacaaaaacc ttgatcgtgg
     6721 aagctatcgt gcgcgaaacc ggcgcctgta atgtacaggt catcggtaaa acgctggtgc
     6781 tttatcgccc aactaaagaa cgtaaaatct cgctgccacg ctaagattat cctaaagtta
     6841 cacacatttg ctgtgtaaaa cgaggggttt tccgcaggca ggagagcaaa atgccacgct
     6901 ctgttcgttg ataaaaggcc gcatagcggc ctttttcctt tctttacaat acatcaacat
     6961 cttgatgtat tgggtaattc ttacaggtat tccaccttaa ttacttcaaa ttctacttcg
     7021 ccgcccggcg ttttgatgac cacaacatca tcttcttctt tgccgatcag gccacgagca
     7081 ataggcgagt ttacagaaat caggttttgt ttaaagtcag cttcgtcatc gccaacgatg
     7141 cgataagtct gttcttcgtc agaatccaga ttcagcaccg ttacggtagc accaaaaata
     7201 acgcgcccat tgttgggcat tttggtgaca tcaatcacct gcgcgttcga cagcttggct
     7261 tcgatgtctt taatacggcc ttcgcagaaa ccctgctgtt cacgagctgc gtggtattcg
     7321 gcgttttctt tcaggtcgcc atgctcacgc gcttccgcga tagcagcaat gatttcagga
     7381 cggcgcacag atttcagaaa atccagctct tcgcgtaatt tttcagcgcc gcgtaaggtc
     7441 atcggaatag cttgcatttg ttatacctct tgaatattcc tgatggggca agtcttcacc
     7501 caccccggct gttcggcctg cccggcataa ctcctcaccg ggaccagaag caaaaaaata
     7561 ccgacccggg tacaagtccc aggtcagcta caattcacat tttgatagtc attttaccct
     7621 gaagttcccg aagggtcatc gtttacttta tagggcgttg cgccgtagta tgacggctcg
     7681 attccaggtt gttagcgcga gattatgcga ttttccagat ttatcatcgg attgaccagc
     7741 tgtatagcgt tcagtgttca ggccgcgaat gttgatgagt acgttactca actccccgct
     7801 ggtgccaacc ttgccctgat ggtgcaaaaa gtcggcgcgt cggcccccgc tattgattac
     7861 cacagtcagc agatggcgct gcccgccagt acgcagaaag tgattactgc gctggcggcg
     7921 ttgattcaac tcggccccga ttttcgtttc accacgacgc ttgaaaccaa aggcaatgtg
     7981 gaaaacggcg tacttaaggg tgacttagtg gcgcgatttg gtgccgatcc gacgttaaaa
     8041 cgtcaggata ttcgcaatat ggtcgcgact ttgaaaaaat ctggcgtcaa ccaaatcgat
     8101 ggcaatgtgt tgatagatac ctccattttc gccagccacg ataaagcccc cggctggcca
     8161 tggaatgaca tgacacaatg ctttagcgct ccgcctgccg ctgccatagt tgaccgcaac
     8221 tgtttctccg tctcgctcta cagtgcccca aaacctggtg atatggcttt tatacgcgtg
     8281 gcatcttatt accccgttac gatgttcagc caggtacgca ccctcccccg aggttctgcc
     8341 gaagcgcaat actgcgaact ggatgtcgta ccaggcgacc tgaaccgctt tacgctgacg
     8401 ggatgcctgc cacaacgttc tgagccgctc ccgttggctt ttgccgtgca ggatggagcc
     8461 agctatgccg gggcaattct gaaagatgag ttaaaacagg caggtatcac ctggagcgga
     8521 acactgctgc gccagactca ggttaacgaa cctggaacgg tagttgccag taaacagtcg
     8581 gccccgttgc acgatctgct taagattatg ctgaaaaagt cggacaacat gatcgccgat
     8641 acggttttcc gcatgatagg ccatgcgcgc ttcaatgtgc ctggaacatg gcgggccggg
     8701 tcggacgccg tgcgtcagat cctgcgccag caagccggtg tcgatattgg aaacaccatt
     8761 attgccgatg gttcagggct ttcgcggcat aacctgattg cccccgccac catgatgcag
     8821 gtgttgcaat acattgccca acacgacaat gaacttaact ttatctccat gctgccgctg
     8881 gcgggctatg atggctcttt gcagtaccgt gcaggtctgc atcaggcggg cgtggatgga
     8941 aaagtctcag cgaaaaccgg ttcgttgcag ggggtatata acctggcggg attcattacc
     9001 acagcgagcg ggcaacgaat ggcgtttgta caatatcttt ctggctatgc agtagaaccg
     9061 gcggatcagc gtaatcgccg tattccgtta gtgcgttttg aaagccgttt gtataaagat
     9121 atttatcaga acaattagtc aaaaagaaac cccggcacat ggccggggtt ttgctgatta
     9181 acgcttgtaa atgaactcaa cgccttcttc gtcgtcttcg tcccagtcat catcccagtc
     9241 ctcatcatcc tcttcagcaa tctcttcaag ctgctggcga tgataatcat cccacatgaa
     9301 ttcgactttc tctggctgtt tcgcttcttc agcctgcacg accgggtttt caatgataaa
     9361 ggtcatcaca tcccagcaga gatctttcac gcccagtcca ctcgccgcag agatcagata
     9421 atatttatct tcccagccca gcgcttcagc aatcgctttc gctttctctt cagcttctgc
     9481 cttatccagc agatcgatct tattgaacac taaccaacgc ggtttcgccg ccagatcctg
     9541 gctgtatttt tccagctcgc tgataataat acgcgcgttt tcaaccggat cggtgccgtc
     9601 aatcggatcg atatcgatga ggtgcaacag gacgcggcaa cgttccaggt gcttcaggaa
     9661 gcggataccc agacctgcgc cttccgcagc gccttcaatc agtcctggaa tatcggcaac
     9721 aacgaagctc ttttcgttgt ccattcgtac cacacccaga cttggcacca gagtggtaaa
     9781 cggataatcc gccactttcg gtttagccgc cgataccgcg cgaataaagg tcgatttacc
     9841 cgcgtttggc atccccaaca taccgacgtc agccagcagc atcagctcca gcagcagctc
     9901 acgcttatca cccggcgtac cgttggtttt ctgccgtggt gtacggttaa cggacgattt
     9961 gaaacgggta ttgcccagac cgtgccagcc gcccttagca accagcagac gctgaccgtg
    10021 tttagtcata tcgcccatgg tttcaccagt accctggtcg attacacgcg tacctaccgg
    10081 cactttaatc gtcacgtctt taccgcgctt accggtacaa tcgcggcttg cgccgttctg
    10141 accgcgctct gcacggaaag atttttcaaa acgataatcg ataagcgtgt tcaggttttc
    10201 gtcggcttcc atccatacgt caccaccatc accaccgtcg ccgccatccg ggccgccttt
    10261 cggaatatac ttttcgcggc ggaagctcac gcaaccatta ccgccatcac ctgcaacgac
    10321 cagaatcgat gcttcatcaa caaacttcat tttattctcc gtaaatcatt cgcctgcgcg
    10381 gggttgcgat accaccgttg tatgcttacg taatccgccc caaatacgat gaccaatggt
    10441 ggaatacatc gcgcccgcaa ccacgacaaa cgcaccgaga taacctaaaa ggtttaacat
    10501 cggtctggcg aagaaatcgg gccaggccag tgataaaaga tctgaaaaaa acagcgtaaa
    10561 cagtggggtg agcgtgatga tcgcgctcac ctgcgctgcc tgccagcgag ccatcgcttc
    10621 cgccagggcg ccatatccta ccaatgtatt cagtccgcaa aaaattaaac atgcgagctg
    10681 ccagtggcta agctgcgcta tcactcctgg ctttgccaga gggaagagcg caattgtaca
    10741 taaagtgtac agcaaaaaca ggatctgcgg tgaggccagc cgacgcaata aaaccttttg
    10801 cgccacgcca taactcaccc aaaccgtcgc cgcaccgacc ccaaagatga ctccccaggt
    10861 gtaatcagtg agctttgtaa atatctcgac cagagtggtg ttaaaaaaca tcaccaggcc
    10921 gctcaggagc atcaatgccc ctacaacctg agtgctgcgc attttctctt tcaggataaa
    10981 tacgctggca accatcatgc caactggcga gagttgccca atcacctgcg aagcggtcgg
    11041 actcaggtat tgcaaggatg agctgaacag gatgaagttc ccaaacagcc cggcggtcgc
    11101 cactgccaac aaaatcaacc agcgtagctt acgaaacacg cgtaatggcg gcaacctctt
    11161 cttcaccgca agaatggcac ccaggccaat actcgccatc aagaaacggt aaaacacgat
    11221 tgtcggaggt tccatcacct ccagcacctg cttcattgcg attggcaacg ccccccagca
    11281 aattgctgtg gtgagcgcca aaagaatgcc aatgcctgcc tgctgcttca taccgtattc
    11341 cctgcaaagc gcatttgcgg attaacgtcg caccatgctc atttttaccg gttatcgaat
    11401 gtaaaaagcc ccgcaacgtg ttgcggggct ttcatccgtt accgggacac gaaaaactta
    11461 ttcagcttcg atgctgataa atttacggtt tttcgggcct ttaacttcga atttcacttt
    11521 accgtctgct ttagcaaaca gagtgtggtc acgaccgcaa cctacgttag cgccagcgtg
    11581 gaatttggta ccacgttgac gaacgatgat gctacccgcc agaacggatt cgccaccgaa
    11641 acgcttaacg cccaagcgtt tagcttctga atcgcgaccg ttacgtgtgg agccgccagc
    11701 ctttttatgt gccatttgaa atctctcctc aggtcttagg cgctgatgcc agtaattttc
    11761 acatcagtga accactgacg atggccctgc tgcttacgat agtgtttacg acgacgaaac
    11821 ttaacgattt taactttctc gccacgaccg tgagcaacaa cttcagcttt gattacgccg
    11881 ccatcaacga aaggaacgcc gattttgact tcttcaccgt ttgcgatcat cagcacttca
    11941 gcgaactcaa cagtttcgcc agttgcgatg tccagctttt ccaggcgaac ggtctgacct
    12001 tcgcttactc ggtgttgttt accaccactt tggaaaaccg cgtacatata aaactccgct
    12061 tccgcgcaca ccttttcaat gattcagagt gcgctataaa tattcacaat agggcgcgaa
    12121 tattacgcaa aacgcacgcc tttgacaagt gctacagtca atacacgaag aaaaaaaaca
    12181 caacttgtac ggtaacgttt atctgtgcca ttttttcagt acaatcaccc tatattccta
    12241 accataaacc ctaagttgcc tttgttcaca gtaaggtaat cggggcgaaa agcccggctt
    12301 ttgcgatgaa tttagaaaaa atcaatgagt taaccgcgca agatatggcg ggtgttaatg
    12361 cggcaatcct tgagcagctt aattccgacg tccaactgat caatcagtta ggctattaca
    12421 tcgtcagcgg cggcggtaaa cgtattcgtc cgatgattgc tgtactggct gcacgagctg
    12481 ttggctatga gggaaatgcg catgtcacca ttgctgccct gatcgagttt atccacacgg
    12541 cgactctgct acacgacgac gttgtggatg aatcagatat gcgcaggggt aaagctaccg
    12601 ccaacgctgc atttggcaat gccgccagcg tgctggtagg cgattttatt tatacccgcg
    12661 cgttccagat gatgaccagc ctcggttcac tcaaagtgct ggaagtcatg tcagaagctg
    12721 taaacgtcat cgcagaaggt gaagttctgc aactgatgaa cgttaacgat ccggacatca
    12781 ctgaagaaaa ctacatgcgc gttatctata gtaaaaccgc gcgtctgttt gaggctgccg
    12841 cgcagtgttc cgggattctg gctggctgta cgccggagga ggagaaaggc ctgcaggatt
    12901 atgggcgcta tctcggcact gctttccagt tgatcgacga tttactcgat tacaatgccg
    12961 atggcgaaca gttaggtaaa aacgtcggcg acgatctgaa cgaaggtaaa ccgacgctgc
    13021 cgctgctgca tgcgatgcat catggcacac cagaacaggc acagatgatc cgtaccgcca
    13081 tcgaacaggg taacggtcgc catcttctgg aaccggttct ggaagcaatg aacgcttgtg
    13141 gatctcttga atggacgcgt cagcgcgccg aggaagaagc agacaaagcc atcgcagcgt
    13201 tacaggtgct cccggacacc ccttggcgag aagcactcat cggcctcgcg cacatcgctg
    13261 ttcaacgcga tcattaatcc cctcccttca tcccgcgcag tgcgcgggat gattccagta
    13321 aattccataa aaacactaat tcagcgctat aacacctgaa aaaaaagggc gatgaatctt
    13381 tatatattct gaatattcac actctttaca ggaacttttt agagcaatag gccatcagga
    13441 gtatagtgat gcccgacaga agaagtgttc tgaatgaaag cgactaactt aaggagtgag
    13501 gaaagatgga aagtaatttc attgactggc atccccctga catcattgca ggtttgcgca
    13561 agaaaggaac gtcaatggcg gcggaatctc gcagaaatgg tttgagttcc tcaacgctgg
    13621 caaacgcatt atcgcgccca tggccgaaag gagagatgat tattgcgaaa gccctgggaa
    13681 ctgacccctg ggttatctgg ccatcacgct accatgatcc gcagacccat gagtttatcg
    13741 acagaacgca gttgatgcgt agctacacta aaccgaaaaa atgagtggtc tggcggtagc
    13801 cccgcgaacg gggctgccag ctctcagacg attactcgcc tttcacacgc ttaatatttg
    13861 cacctaaagc gcgcagtttg tcttcaatgc gttcgtagcc acgatcgatg tgataaatac
    13921 gatcaaccac cgtcgtccct tccgcaatac agccagccag caccaggctt gctgatgcac
    13981 gcagatcggt tgccataacc tgtgcaccag aaagtttttc aacaccatga caaataacgg
    14041 tattgctttc gatttcggca tgcgcgccca tacggctaag ctccggcaca tgcataaagc
    14101 ggttttcaaa gaccgtttcg gtgatgaatc cggtcccttc tgccaccagg ttcaacagcg
    14161 tgaactgggc ctgcatatcg gtcgggaatg ccggatgcgg cgcggtacgt acgttaacag
    14221 tcttcggacg tttgccatgc atatccaggc taatccagtc ttcgccgact tcgatgtccg
    14281 ctccagcgtc acgcagtttc gccagcacgg cgtcgagagt atctggctgc gcgttacggc
    14341 agataatttt gccgcgagaa atcgccgccg ccaccaggaa agtaccggtt tcgatacgat
    14401 ccggtagcac gcgatagaca ccgccgccta aacgttccac accttcgatg acgatacgat
    14461 cggtgccctg accgctaatt ttcgcaccca gcgtaatcag gaagttcgcg gtatcgacga
    14521 tttccggttc acgcgctgcg ttttcaataa tcgtggtacc ttccgccagg gttgcagcac
    14581 acatgatggt caccgttgcg ccaacgctga ctttatccat cacgatatgt gcgcctttca
    14641 gacgaccatc gacggaagct ttaacgtaac cttcttccag tttgatggtc gcgcctaatt
    14701 gttcgaggcc agaaatgtgt agatcaaccg gacgcgcacc gatcgtacaa ccgccaggca
    14761 gtgaaacttg cccctgacca aagcgcgcta ccagcggccc cagtgcccag atagaagcac
    14821 gcatggtttt aaccagatcg taaggtgcgc agaatacatt aacgtcgcgg gcatcaatat
    14881 gcacagaacc attacgttct actttcgcac ccagctgact tagcagcttc attgatgtat
    14941 cgacgtcttt cagtttcggg acgttctgga tctctaccgg ttcttccgcc agtagagcgg
    15001 caaaaaggat aggcagagca gcatttttag cgccggaaat tgtgacttcg ccctggagct
    15061 tcgttggccc ctgaacacga aatttatcca tttagtttgt tctcagttaa caattcatat
    15121 ccgctaccgg cgaatcgccc atagctcaaa agccgttcag tttgcgatcg cgcgcccact
    15181 ccgcaggggt atacgctttg atcgacacag catgaatgcg gttatccgca atatattcca
    15241 tcagcgggcc atagaccgtc tgctgttttt taacccgact catgccgtca aacaactcac
    15301 ccacggcaat aacctgaaag tggctgccat cgccggaaac gtggacttcc tggagggaga
    15361 gagcgttcat caacacgctc tgaatttcat tattttccat gggatcttca atcatcagtt
    15421 aataaaccag cgaaacatct tagagcaaag ttgcgctggc ataaataagc aaaaagcctc
    15481 gctgataaat cagacaaggc tcgacttgca ggcaggtttg ccggacaggc ggttaacgcc
    15541 atatccggcc tgaaaaaatt taacgaggca gaacatcagc aggcaaatta tacaatttcg
    15601 ccagggtata cactttgtcg tttaccccct gaagcgtcac attgttgccc tgctttttcg
    15661 ccagatcgat aagatggagc agcagtgcca gtccccccgt atccacgcgg gacacacggc
    15721 taagatcgat gcaggtaatc cccttcaccg cttcctcacg catttcccaa agcggtagca
    15781 aaacgtcctg atccagctct ccggataacg ccagcgtgtc acccgtctgc atccagctca
    15841 gtgactcgct cattattttt tctcttccag agtgattttc tgttgagaaa tcgatttcag
    15901 ttgcgcagtc aggccgtcga tacctttggt acgcagcagc gttccccact cgttttgttt
    15961 ggtggtgatc atactgacgc cttcagcaat catgtcgtaa gcctgccagt tgcccgtctg
    16021 ggagttttta cgccactgga agtccagacg caccggcggg cggccattcg gatcaataat
    16081 ggtaacgcga atcggcacaa tggttttatc gcccagcggc tgttctggcg caatctgata
    16141 ggtttgaccg tgatacatcg ccagcgcctg accgtaagcc tgcttcaggt actcacggaa
    16201 agcggcaaag taggcttcac gttgagcagg ggtcgcactc ttgtaatact ggcccagcac
    16261 cagcgcaccg gcgtatttca cctgtacgta tggcagcagt tcctgatcaa caatggtacg
    16321 cagataatcc gggttggccc gaatttgcgg ttgctcattc ttcaggcgat cgaacgtttt
    16381 ctgcgccgcc tcgtccatca gcttataagg attggtctgg tctgccgcgg ttgccgcact
    16441 cagcggtgca atcaccagca aagcgaccat cattaaacgt ttaaacatgc gtcggttctc
    16501 ctgaaattat ttcgttgtac ccacaggttc agtggtttca ttattacctg gcgcagcagc
    16561 tggcgcatcg ccactattct tattgtcatc gcctttacta ccgtaaagga actgaccaat
    16621 gagatcttcc agcaccatcg cagacttagt gtcctgaatt gtatcgccat ccttcaggat
    16681 agcagtcccc agttccgggt cttcaaaacc gacgtttaat gccagatatt gttcccccag
    16741 caggccggaa gtacgaatgc tcagcgaact ggtatctgga atgtggttat aacgttgttc
    16801 aatttccagc gttacgcgtg gcagataggt tttcgggtcc agcgtaatat ccgccacccg
    16861 gcccacaaca acgccaccaa tactgaccgg agagcgcgct ttcaggccgc caatgttatc
    16921 gaacgtcgca taaagcgtgt aggtcggttc agtacgtatg gacgtcacgt tcgccgcctt
    16981 caggcaaaca aacagagccg ccagcagtgc tgctaataaa aagataccca cccaaatttc
    17041 attttttttc gtttgcatga actcaattcc caaacatcaa tgcggtcagc acaaaatcca
    17101 gccccagaac agccagagac gagtggacaa cggtgcgagt ggttgcccgg ctaatcccgg
    17161 cagacgtcgg gatggcgtcg tagccgttaa acaacgaaat ccacgtcacc gtgatggcga
    17221 acaccacgct cttaatcaga cagttgacca gatccatacg ccagtcgacg gcattttgca
    17281 ttgccgacca gaagaacccg ctatcaatgc ctttccaact gacgccgacc agagatccgc
    17341 cccagatccc cacggcgacg aaaataaccg tcaacagtgg taatgaaata accccagccc
    17401 agaaacgggg agaaataacc cgacgcagcg gatccaccgc catcatctcc atactggaga
    17461 gttgctctgt agcgcgcatc aggccgattt ctgcggttag cgccgaacca gcacgcccgg
    17521 caaacaacaa cgcggcaacc accggcccca gttcacgcag tagcgataac gccaccagca
    17581 tacccagact ggtttccgca ctataagtgg tcagaaccag ataaccttgc agccccaaca
    17641 ccattccgat gaacacgcca gaaaccacaa taatcagcat cgacaggacg ccgacattat
    17701 agagctggcg caccagcagc ggcgcatgtt tgcgaaattc cggtttgccg accagcgcat
    17761 tgaataacat taacccggcc cgcccgaacg ttctcagggt tttaatccct ttatgtccga
    17821 gcgacgccag cgcatttaac agcatgagtg gcttaactcc ctggtaaaag atcagcgtga
    17881 taatcgccgg caggatagcg gaacggaaca ggcccgtcag ctatcccgtc cagaaactga
    17941 cgtacgcgcg gatcaggatt cgcctgcaac gcctgggcac tgccatgagc gacaattttt
    18001 ttgtccgcca ggatccaggc gtgatccgca atacttaaca cttccggcac atcgtgagaa
    18061 accaccacac aagtcacgcc cagcgcgctg ttcagctcag aaatcagctt caccagtacg
    18121 cccatggtga tgggatcttg cccaacaaaa ggttcatcaa acatgatgag atccggctcc
    18181 agcgcaatcg cacgcgccag cgctgcacgc cgcgccatcc caccggaaag ttcagaaggc
    18241 attagtttag ccgctccacg cagccccacg gcctccagct tcatcatcac cgtactatgc
    18301 aacaatggcg cgggaagttg ggtatgttcg cgcagtggat aggcgacgtt gtcaaatacg
    18361 ttcatatcag tgaacaacgc cccggactga aataacatgc tcatccgttt gcgcactgta
    18421 tacaggcgcg aacgagacat cgccggaata ttctcaccat cgaaaaggat ctcaccatga
    18481 tctggtgcga tttgcccgcc aatcagacgg agtagcgtcg ttttaccgat gcccgatggc
    18541 cccatgatcg ccgtgatctt ccctcgcggc acggtcaggg aaatattatc gaagatgcag
    18601 cgattgccac gcgtaaaact gacatcgcgc atatcgacta aattcgccac agactgctcc
    18661 ataattcacc cttcgtcttg cgttgatttt ctaagcatgg cgctcaattt aaccttgaac
    18721 ccaacatatt tacagaatat tacccgccgt ggttagcgaa agctggcatt tgttttactt
    18781 tttagccgca taaagtcaaa attaagaatc cgttacggct ttctgaaaat cttcagcgga
    18841 ccggcgagta tacctgaaga aaggacgtta gatgctttta gctacggcac tgttaattgt
    18901 tggtttactt ttggtcgttt acagtgccga ccgcctggtt tttgccgcgt ctattctttg
    18961 ccgaaccttt ggcatcccgc cgctgatcat cggcatgacg gtggtcagta ttggtacatc
    19021 gttaccagaa atcatcgtct cgcttgccgc gtctctgcac gaacaacgcg atttagccgt
    19081 tggtacagcc ctcggctcaa acattatcaa tattttgctg atcctcggtc tggctgcgct
    19141 ggttcgtcct tttaccgtcc attccgatgt tctgcgtcgt gaattaccct taatgttgtt
    19201 ggtcagcgta gtggccggtt ccgtactcta tgacggacaa cttagtcgca gcgatggtat
    19261 ctttctcctc tttctggctg tgctatggct gctgttcatt gttaaacttg cacgtcaggc
    19321 tgaacgtcag gggactgaca gcctgaccag agagcagctt gcagagctgc cgcgtgacgg
    19381 cggattgccc gtcgcgtttt tatggctcgg cattgcgctt atcatcatgc cagtggccac
    19441 gcggatggtg gttgataacg ccacggtgct ggcgaattac tttgccatca gcgagttgac
    19501 gatgggtctg acggcaattg ctatcggaac cagcctgccg gaactggcaa ccgcaatagc
    19561 ggggggtcgc aaaggtgaaa acgacattgc tgtcggaaat atcattggcg caaacatttt
    19621 taatattgtc atcgtgttgg gtttacccgc gctgataacg ccaggagaga ttgatccatt
    19681 ggcgtacagt cgtgactaca gcgtgatgtt gctggtgagc attatttttg cgttgctgtg
    19741 ctggcggcgc tccccgcaac ggggccgtgg tgtaggggta ttattaactg gcggatttat
    19801 cgtatggctg gcgatgttgt actggttatc gccaatactc gttgaataac tggaaacgca
    19861 ttatgtcgca cgtagagtta caaccgggtt ttgactttca gcaagcaggt aaagaagtcc
    19921 tggcgattga acgtgaatgc ctggcggagc ttgatcaata catcaatcag aatttcacgc
    19981 ttgcctgtga aaagatgttc tggtgtaaag ggaaagttgt cgtcatgggg atggggaaat
    20041 cggggcacat cgggcgcaaa atggccgcaa cgtttgccag caccggtaca ccttcatttt
    20101 tcgtccatcc tggtgaagcc gcgcatggtg atttaggcat ggtcacccca caggatgtgg
    20161 tgattgctat ctctaactca ggtgaatcca gcgaaatcac ggccttaatt ccagtgctta
    20221 agcgtcttca cgtaccgtta atctgcatca ccggtcgccc ggagagcagc atggcgcgcg
    20281 ccgcagatgt gcatctgtgt gttaaagtag cgaaagaagc ctgtccgtta gggctggcac
    20341 cgaccagcag caccaccgcc acgctggtta tgggcgatgc cctcgctgtc gcgctgttaa
    20401 aagcacgcgg ctttactgct gaagattttg cgctctcaca cccaggcggc gcactgggtc
    20461 gtaaacttct gctgcgcgta aacgatatta tgcatacggg cgatgagatc ccgcatgtta
    20521 agaaaacggc cagtctgcgt gacgcattgc tggaagttac ccgcaaaaat cttggtatga
    20581 ctgtcatttg cgatgacaat atgatgattg aaggcatctt taccgacggt gatttacgcc
    20641 gtgtcttcga tatgggcgtg gatgttcgtc agttaagtat tgccgatgtg atgacgccgg
    20701 ggggaatacg cgtgcgccct ggcattctgg ccgttgaggc actgaactta atgcagtccc
    20761 gccatatcac ctccgtgatg gttgccgatg gcgaccattt actcggtgtg ttacatatgc
    20821 atgatttact gcgtgcaggc gtagtgtaaa gattcaagga taaacaacaa tgagcaaagc
    20881 aggtgcgtcg cttgcgacct gttacggccc tgtcagcgcc gacgttatag caaaagcaga
    20941 gaacattcgt ctgctgatcc tcgacgttga tggcgtactg tcagatggcc tgatttatat
    21001 gggcaataac ggcgaagagc tgaaagcgtt caatgttcgt gacggttatg gcattcgttg
    21061 tgcgctcacc tctgatattg aagtcgctat cattaccggg cgaaaggcta aactggtaga
    21121 agatcgttgt gccacattgg ggatcactca cttgtatcag gggcagtcaa acaaactgat
    21181 cgcctttagc gatctgctgg aaaaactggc gattgccccg gaaaatgtgg cttatgtcgg
    21241 cgatgatctc atcgactggc cggtaatgga aaaagtgggt ttaagcgtcg ccgtggccga
    21301 tgctcatcca ctgttgatcc cgcgcgccga ttatgtgacg cgcattgctg gcggttgtgg
    21361 cgcagtgcga gaagtttgcg acttattact cctggcgcag ggcaaactgg atgaagccaa
    21421 agggcaatcg atatgagtaa agccagacgt tgggttatca ttgtgctatc actggcggtt
    21481 ctggtgatga tcggcattaa tatggccgaa aaagacgata ccgcccaggt ggtcgtcaac
    21541 aacaatgatc ccacctataa aagcgagcat acggacacgc tcgtctataa cccagaaggg
    21601 gcactaagct atcgattgat tgctcaacac gttgaatatt attccgatca ggccgtttcg
    21661 tggtttacgc agccggtact taccacgttt gataaggata aaatcccgac atggtccgta
    21721 aaagcagata aagccaagct gaccaatgac cggatgctct atttatatgg acacgttgaa
    21781 gtcaacgcac ttgtgccgga ctctcaactt cgcagaatca cgacggataa cgcgcagatc
    21841 aatctggtga cgcaggatgt tacctctgaa gacctcgtca cgttatacgg aacaacattt
    21901 aactccagcg gtctgaaaat tcgcggcaac ttacgcagca agaacgccga gctgattgaa
    21961 aaggttagaa catcctatga aattcaaaac aaacaaactc agccttaatc ttgtgcttgc
    22021 cagctcactt ctggccgcca gcattccggc atttgccgta accggagaca ctgatcagcc
    22081 gatccacatt gaatcggacc agcaatctct tgatatgcaa ggcaacgtgg ttacctttac
    22141 cggtaatgtc atcgtcaccc agggcaccat caaaattaat gccgacaaag tggtcgttac
    22201 ccgtccgggc ggcgaacaag gtaaagaagt gattgacggc tacggtaaac cggcaacgtt
    22261 ctaccagatg caggacaacg gtaaacccgt tgaaggtcat gcttcccaga tgcactacga
    22321 actggcaaaa gattttgtcg ttctgacggg taatgcttat ctgcagcagg tcgatagcaa
    22381 cattaagggc gataagatca cttacctggt gaaagagcag aaaatgcagg ctttcagcga
    22441 caaaggcaag cgcgtaacaa ccgttctggt gccgtcgcag ctgcaggaca aaaacaacaa
    22501 aggccagacc ccggcacaga agaagggtaa ttaattcgtt atggcaacat taactgcaaa
    22561 gaaccttgca aaagcctata aaggccgtcg cgtggtagaa gacgtcagcc tgaccgtcaa
    22621 ctccggggaa attgtcggtc tgctggggcc aaacggtgcc ggtaagacca ccactttcta
    22681 tatggttgtt ggcattgtgc cgcgcgatgc gggcaacatc attattgatg atgacgatat
    22741 cagtctgctg cctctgcatg cacgcgcgcg ccgcggtatc ggctatctgc cacaggaagc
    22801 ctccattttc cgtcgcctca gcgtttacga taacctgatg gcggtactgc aaattcgtga
    22861 cgacttgtct gctgaacaac gtgaagaccg cgcgaacgag ctgatggaag agtttcacat
    22921 tgagcacctg cgtgacagca tggggcagtc actctccggg ggtgaacgtc gccgtgtaga
    22981 aattgcccgc gcactggctg cgaatccgaa atttattcta ctcgacgaac cgtttgccgg
    23041 ggttgacccg atctcggtta tcgacattaa acgcatcatt gaacacctgc gcgacagcgg
    23101 cctgggcgta ctgatcactg accacaacgt gcgtgaaaca ctggcggttt gtgaacgcgc
    23161 ttatatcgtc agtcaggggc atttgattgc ccacggcacg cctacagaaa tcttacaaga
    23221 cgaacacgtt aagcgtgtat accttgggga agacttcaga ctctgatagg gtagaagttt
    23281 gcgacgtttt agcaggagag tacgattctg aacatgaagc aaggtttgca actcaggctt
    23341 agccaacaac tggcgatgac gccacagctt caacaggcga ttcgtctgtt gcagttgtcg
    23401 acgctggaac ttcagcagga gctacagcag gcgctggaga gtaatccgct gcttgagcaa
    23461 atcgacactc atgaagaaat cgacacccgc gaaacgcaag acagtgaaac gctggacacc
    23521 gccgacgcgc tcgaacaaaa agagatgccg gaagagctgc cgctcgatgc cagttgggac
    23581 accatttaca ccgctggtac accatccggc accagcggtg actacattga cgatgagctg
    23641 ccggtctatc agggcgaaac gacgcagacc ttgcaggatt acctgatgtg gcaggtcgag
    23701 ctgacaccgt tttccgacac tgaccgcgct attgctacct ctatcgtcga tgccgttgat
    23761 gacaccggtt atctgactgt cccgctggaa gatattctcg aaagtatggg cgatgaagag
    23821 atcgacatcg acgaggttga agccgtcctt aagcggatcc aacggtttga tccggtcggt
    23881 gtagcggcaa aagatctgcg tgactgcctg ctaatccaac tctcccaatt cgataaaacc
    23941 acgccgtggc tggaagaggc cagactgatc attagcgatc atctcgatct gttagccaat
    24001 cacgacttcc gcactttaat gcgcgtcacg cgtctgaaag aagatgtgct gaaagaagcc
    24061 gtcaatctga tccagtcgct cgatccgcgc cccgggcagt cgatccagac tggcgaacct
    24121 gagtatgtca ttccagatgt gctggtgcgt aagcataacg gtcactggac ggtagaactc
    24181 aacagtgaca gcattccgcg tctgcaaatc aaccagcact acgcctcgat gtgcaataac
    24241 gcgcgcaacg atggtgacag ccagtttatc cgcagcaatc tgcaggatgc caaatggttg
    24301 atcaagagtc tggaaagccg taacgatacg ctactgcgcg tgagtcgctg tatcgttgaa
    24361 cagcagcaag ccttctttga gcaaggtgaa gaatatatga aaccgatggt actggccgat
    24421 atcgcccagg ctgtcgaaat gcatgaatcg acgatatctc gcgtgaccac gcaaaaatac
    24481 ctgcatagtc cacgaggcat ttttgaactg aagtatttct tttccagtca cgtcaatacc
    24541 gagggcggcg gcgaagcttc ctccacggcg attcgtgcgc tggtgaagaa attaatcgcg
    24601 gcggaaaacc cagcgaaacc gttgagcgac agcaagttaa cctctttgct gtcggaacaa
    24661 ggtatcatgg tggcacgccg cactgttgcg aagtaccgag agtctttatc cattccgccg
    24721 tcaaaccagc gtaaacagct cgtttgaccc aaccgataag gaagacacta tgcagctcaa
    24781 cattaccgga aatcacgtcg agatcaccga ggcactgcgc gaatttgtta gagccaaatt
    24841 tgccaaactt gagcaatatt ttgaccgaat caaccaggtc tatgttgttc tgaaagtgga
    24901 gaaagtcacc cacacctcag atgcaacact gcatgtaaac ggtggtgaaa ttcatgccag
    24961 cgcggaaggt caggacatgt acgctgccat tgatggctta attgataagc tggcacgcca
    25021 gttgaccaaa cataaagata aactgaaaca acactaattg tccgggcaat tagcatgtgc
    25081 atggcggcct gttgtgcggc acaacgggcc atttgtacgg ttaatgctcc gagcctgttc
    25141 cactgtttga gtgggcaggt tcttaggtga aattatgaca aataatgata caactctaca
    25201 gcttagcagt gttcttaaca gggaatgtac gcgaagccgc gttcactgtc agagcaaaaa
    25261 acgcgccctg gaaatcatca gcgagctggc ggcgaaacaa cttagcctgc cgcctcaggt
    25321 ggtttttgaa gctatcctga cgcgggaaaa aatgggcagt accggtatcg gcaatggtat
    25381 tgccattccg catggcaaac tggaagaaga tactctgcgc gccgttggcg ttttcgttca
    25441 gctcgaaacg cctatagctt tcgatgccat cgacaaccaa ccggtggact tactttttgc
    25501 cctgctggtg ccggcagacc aaactaaaac gcacctgcat actctgtcgc tggtggcgaa
    25561 acgtctggcg gacaaaacca tctgccgccg tttacgcgca gcccagagcg atgaagagct
    25621 gtatcaaatc attacggata ccgaaggtac tccggatgaa gcgtagttat tcggtaatgt
    25681 ctcttttaga cgttgtgagg agaaacagta catggtactg atgatcgtca gcggacgttc
    25741 aggttcaggt aaatctgtcg ccctgcgtgc gctggaagat atgggttttt actgcgtgga
    25801 taaccttccc gtagtgttgt tacccgatct ggctcgaagc ctggccgatc gcgagatttc
    25861 tgccgccgtc agcattgatg ttcgtaatat gccggagtca ccagaaatat tcgaacaggc
    25921 gatgagtaac ctgcctgacg ctttctcacc gcaactcctg ttcctggatg ccgaccgtaa
    25981 taccttaatt cgtcgttaca gtgacacgcg ccgactgcat ccgctttcca gcaaaaacct
    26041 gtcgctggaa agtgctatcg acaaagaaag cgatttgctg gagcctctgc gttcgcgagc
    26101 ggatctgatt gtcgatacct cagaaatgtc cgttcacgag ctggctgaaa tgctgcgtac
    26161 ccgtctgctg ggtaaacgtg aacgcgaact gaccatggtc tttgagtctt tcggcttcaa
    26221 acacggtatc cctatcgatg cagattacgt ctttgacgtg cgcttcttgc cgaacccgca
    26281 ctgggatccg aaactgcgtc caatgacagg tcttgataaa cctgtcgccg cgttcctcga
    26341 ccgccacaca gaagtacaca attttatcta ccagacgcga agctatcttg agctatggtt
    26401 acctatgctg gaaaccaaca accgtagcta cttgacggtc gccattggtt gtaccggcgg
    26461 gaagcaccgt tcggtgtata ttgcagagca actggcagac tacttccgct cgcgcggtaa
    26521 aaacgtccag tcacgccatc gtacgctgga aaaacgtaaa ccatgaccgt caagcaaact
    26581 gttgaaatca caaacaagct gggcatgcat gcccggcctg caatgaagct gtttgaatta
    26641 atgcagggtt ttgacgctga agtgctgtta cgtaatgacg aaggcaccga ggccgaagcc
    26701 aacagcgtta ttgcgctgct gatgttggat tctgccaaag gacggcagat tgaagttgaa
    26761 gcgaccggcc cacaggaaga ggaagcactg gccgccgtta tcgccctctt taactctggt
    26821 tttgatgaag attaatcttc atcactttga catacaactc ccttcaaact ccccccgaca
    26881 ataagaaaat cacgtactga aatcgttctc aatcaacgtc atttgtacat tttgtgcgct
    26941 tttcactttc agaagaacct taagaaaacc ttaagaggca ttgtttaggt tttgtttaag
    27001 ttaatcgacc atactggaga tcgtcagaaa atatttccag gagatggcat gattcgctta
    27061 tctgaacaaa gtcccctggg caccggaaga catcggaaat gttatgcgca tccggaagat
    27121 gcccaacgct gtatcaagat tgtctaccat cgtggcgatg gtggcgatgg tggcgatggt
    27181 ggcgataaag agatccgccg tgagttaaag tactacgcgc atcttggtcg ccggttaaaa
    27241 gactggagtg gaataccgcg ctatcacggt accgttgaga cggattgcgg aaccggttat
    27301 gtctacgatg tgattgcaga ttttgacggc aaaccctcca ttacgctgac cgaatttgct
    27361 gaacaatgcc gttacgaaga agacattgca caactgcgcc agcgactgaa acagctgaag
    27421 cgttatttgc aggataaccg tatcgtgacg atgtcgctga agccgcagaa tatcctctgt
    27481 caccacatca gtgagtcaga ggttatcccg gtcgtctgcg acaacattgg tgaaagcaca
    27541 ttgattccac tggcgacctg gtcgaagtgg tgttgtctgc gtaagcaaga gcggttatgg
    27601 aaacgattta tcgcccaacc ggcgctggct attgccctgc agaaagatct gcaacctcgt
    27661 gagagcaaaa cgctggccct cacttcgcgc gaagcttaat ccagctggtg ttgttgcata
    27721 aacggctcac cgcctaactg atacatctgc cgtaaaatcc acgcctgacg gctacgcacg
    27781 tagcccgatg gcgaggagac tttgaaacga agtggattag gtaatacagc tgccagtaat
    27841 gcagcttccg accgggtaag tttgctcgcg ggtttgtgga aataacgttg tgccgcagct
    27901 tcgacgccaa acacaccgtc gccaaattcg gcgatattca ggtaaaccgt caggatacgc
    27961 tttttgctcc agactatttc tatccccagc gttaatccag cttccagccc ttttcgtacc
    28021 cagctacgcc catcccataa aaagagattt ttggccgtct gctgagaaat cgttgaagca
    28081 ccgcgaatac agttttcatt gcgctcgttg tgcgccaggg ctttctcaat ggaagcgaca
    28141 tcaaagcccc agtgctcagg aaatttctga tcttctgcgg caatcaccgc cagtcccatc
    28201 cacggcgaga tttgatccat actgacccag tcagaatgtg ccacgtaacg aaaattgcca
    28261 tgcagctagg cgctgacctg tcgctcgacc attaccgctg agaagggaac aggcgcaaca
    28321 ctaaacaacg cgatgccccc gccccagaaa acggcgagga caaccattaa ccgcaaaaga
    28381 aaacggcgaa cgaaactaaa caccgttaag cggcttttac tcattcagcc agaaccagca
    28441 cgcgggaaac cagcttatca atgccgctcg ccgcttctgc aatgttctgc gccagcatat
    28501 atgctggggt ggtgacaatc ttattgtctt catcaaccac gatatcatcg acaggacagg
    28561 gcacatgctc cgcgcccatc tcttccagca cttctgcggt atcgatatca gtaccgatgg
    28621 tcaaacgcag cgggaaatcg aaaattttcg gcagcatcgc cggggcaata cacataaaac
    28681 caagcggttt tccggcctga tgcatcgctt gtgccagcgc ctttaattca cggtcaacgg
    28741 tgcattcgct accaagagtg gcaaaattgc ttaaattctt cgccgcgcca aacccccccg
    28801 gcacaatcaa cgcatccagt tcagcggcat cggcctgggc cagaggacgg atttcaccgc
    28861 gcgttattcg tgccgcttca atcagcacgt tgcgcgtttc cgtcatcgct tcgccagtta
    28921 aatggttgat aacatcaacc tgctgcttat ccggtgcaaa gcagaccgcc tgcgcaccgc
    28981 tgcgtgaaat agctaacaac gtcaacaccg cttcatgaat ttcagaaccg tcatagacgc
    29041 cgcatccgct cagaattacg ccaattttct tcattgtgat catcctttcg caattgactg
    29101 aaacacatta atttttttaa taaaaatggt acgcatcaca catttaactg attcatgtaa
    29161 caaatcattt aagttttgct atcttaactg cgtgcggcct gaaaaacagt gctgtgccct
    29221 tgtaactcat cataataatt tacggcgcag ccaagatttc cctggtgttg gcgcagtatt
    29281 cgcgcacccc ggtctagccg gggtcatttt ttagtggctt ttgccaccca cgctttcagc
    29341 acttctacgt cgtgacgcca ctcttctttc atctcttcaa tccattcacc gacgttatct
    29401 tcccaggcag gaaggtcagg agactgaatt tgctgaccca gctgttgcag atggcgtaac
    29461 cccactgacc ccgccgcacc tttaatttta tgtccttcct caacaatgcc ttttttatcc
    29521 tgcgccgtca gattcgactc cagcacgctg acatagcccg gcatcatctt ctcaaacacc
    29581 gctaacccgt cggtgatcag cttcggtcct acaagttcga gatactgttc cagcatggga
    29641 atatcgagca atgcttctga tttactgttc tcttctgtcg tcaccgtact ctcctcatca
    29701 tcctgggtat cccagaattt cttgatcatc gcggttagcg ccggaaccga aagcggctta
    29761 ctcagcacat catccattcc agcattgagg tactcttgtt tgtctttcag cacgttagcg
    29821 gttaaggcca ccagcggcgg taaatcctcg cgcggataac gcttcgtcag ttcacgagag
    29881 atatccagcc cggtcatatc tggcaactga atatccagca acaccaggtc gtattcgccc
    29941 ggtttaaaca tctccagcgc cgccttgccg gtcatggcga catcaacgct gttacctaat
    30001 ttttccagca cagaacgcgc aacaatcacg ttcagttcaa tgtcttccac cagcagcaca
    30061 ttcagcgccg gtaaaggcat atcgtcttca tcaaacgcat catcgacctc ttctgctacc
    30121 gacggtgcgt ggatcgtcaa cgtaaaggtt gaacctttgc cctgttcgct ggtaaccgta
    30181 atatcgccgc ccatattttt cgccagacga cgagaaacgg ccagaccaat accggtgccg
    30241 gtggcaggtt taccgccatg actgtctttc acctggtaat acatggcgaa aattttatcc
    30301 agctcatcct gcggaatgcc gataccagag tcttccactt caaaatgcag catatcgcct
    30361 tcatcgtagc gcacgcgcac ggtaacctgg ccttgctggg tgaatttgac ggcgttactg
    30421 atgaggttcc acaggatctg ccgtaaacgc gtcccgtcgg taatgacctg atgcggtaat
    30481 ggcagcgtcg gctccaggtt aaagcgcaat cctttttgtt gcgcctgcaa tgcggagaga
    30541 ttttccagat cggcaaggaa gctggtgaaa tcaaccggtt gattatcaag ctggaccttg
    30601 cgccgttcca tcttatccat gtcgataata tcgttaaaga tattccccag cgtgacggcc
    30661 gaaacatgga tggtcttgag atatttttcc tgctcggcgg tgagttcggt atccagcaga
    30721 atgcggctca gaccgacgat accgttcagc ggtgtacgca attcgtgact gatggtggag
    30781 ataaacgtcg ttttgtcgcg gctggcccgt tcaagcgcat cctgataccg cttacgctcg
    30841 gtaatgtcgc gaccaaagcc catcaaaccg tgacgtttac ccacgcggtc gtagtacggc
    30901 actttacgga tttcaaagca ggctttgcgc ccgtccgggt aatccagcca ctgttcatag
    30961 gtcagtgaca cattatgacg gaacactttt tcatcggttt caatgacttt tgcggcggct
    31021 tccggtgagt aaacatcagc aggtttcagg tgaaccagtt gtttttcgct ttttccggtc
    31081 agcagctcca tcgcgcggtt acagccggaa aactctttat cttcgttacg ataaaaaacc
    31141 aggtcgggtg aagcatcaag gaaggaacgt aagaatgagg attgctgctc gagctgaatt
    31201 tgtgtctctt cgcgctcttt gatttcaatt ttcagttggc cgaaggtttc ctgcagttct
    31261 gcttccgctt tttcacgaac ggcaatttcc tgatttagct gggcaatatt atcttttaac
    31321 tgaacgttga ggctcaaatc gcgctcgcgc atctcctcca gtttttgcac cagccgtgac
    31381 agacgttgtc gtgactcctc cagttgctcg acgaccaccg atagaaagta gaccgcccac
    31441 ggcgtaatca gcaaaccaaa gaagatagaa cgaataacat caatgctttc gacctgacca
    31501 tgcagcacca tggttaccgc catttgtacc acaatggcaa gaacgacgag ggccagcgcc
    31561 agcaacattg agaagcgcac cagacctaac ttcatcatca ggtcaacata atactgcgcc
    31621 agcagacgaa tttgcttcat tagggaattc cttcacgaca acctgcccca ataataccca
    31681 attctgacag ttacgttata aattgtgtga gaaatgcgga attcccctca acgacctact
    31741 ccgttggagg tagccacgga cgtcccagcg ccgatccctg tacgccatgt tcattcagat
    31801 agcgatccag ctcgaccatt cccgtccatc gattttcgca ccacagcgga gcaagcagcg
    31861 tcgggcgacg ggcgctggcg gaaatgcggt ggtagatcac ttccggtggc gtatggcgaa
    31921 tcatttctcc ggcagtgagc gtgtaatcct cctgttcaat accgttcaaa cgccccgctt
    31981 cccaggcttt cgccataatg ctgcctttca caatatgcag cggatgcagc tttatgccgt
    32041 ccacgccggt ttcaaccact cgctccagcg tttgcaaaca ttcagcctgc ccttcgccag
    32101 gcaggccgac aattaagtgg gaacacacct tcagcccgcg ctgacgtgcc agctgggttg
    32161 tacgctgata acaggcaaaa tcatggccgc ggttgatgcg atgcagtgtt ttgtcgtggg
    32221 cggtttgtag ccccagctcc agccacactt cgtaaccctg gtccttatat tcgcaaagca
    32281 gatccagcac cgcatccggc acgcagtccg ggcgggtacc aacacacaaa ccgacaatat
    32341 tggcctggct caccgcctgc tgatacatag aacgcagcac ctgaacttcc gcaaaggtgc
    32401 tagtatacgc ctgaaagtag gccagatagc gtttagcgcg gttaactaaa ttcgcctggt
    32461 gcgccagttg ctcggcaatg gaacgatgct gctgcgcttc atcggcaaac gaggcaacat
    32521 tacagaatgt gcagccacca cgcccgatgg taccgtcacg gttagggcag ctaaaaccgc
    32581 cgtgcagcgt cagcttatgc accttttgcc cataacgacg ggtgagatca ccaccaaaca
    32641 tattgactaa tttctgtaac tgcataatct gatagaccgc gccttgaaaa gaggccaaag
    32701 cctgccattt ttagctcaat tcggcgatga cctggatcaa tcgtcccggc ctgcttttat
    32761 caactgcata atcaatcaaa attaccgaag tttcatgcat aatcacataa atcacttttg
    32821 cttatcttgt gtcagatttt tttatctcct tatggatttt aggcaaaaac agtagcatga
    32881 aacgtcatta ccaattaagg cagtataaaa tgctggtttt atcgtcagtt caaggcagga
    32941 taagggttaa cacgccttta tgacagtcag gaattgactg tttctctaac gacttccctt
    33001 ttagccttaa agataaaatt cattttaatt tcagtcactt aataaagaat tttgcgctaa
    33061 agcacatttc tgtaccaata agcttgccat ttgacctgta tcagctttcc cgataagttg
    33121 gaaatccgct ggaagctttc tggatgagca gcctgctcat catatttatg cagtaattga
    33181 gatcccctct tcaccgtatt aaccgatgcg aaaaggacaa caagggggcg aatgcgaggc
    33241 gcgcgtatga cacgcaaccc ccgtcgccac gctctttctg tgcccgtgcg cagcggttcg
    33301 gaagtggggt tcccgcagag cctgggggag gttcacgata tgttgtacga taaatccctt
    33361 gagagggata actgtggttt cggcctgatc gcccacatag aaggcgaacc tagccacaag
    33421 gtagtgcgta ctgcaataca cgcactggcc cgcatgcagc accgtggcgc gattctcgcc
    33481 gatggtaaaa ccggtgacgg ttgcggcttg ctgttacaaa aaccggatcg cttttttcgc
    33541 atcgttgcgc aggagcgcgg ctggcgttta gcaaaaaact acgctgtcgg gatgctcttc
    33601 ctgaataaag atcctgaact cgcggctgcc gcacgccgca tcgttgaaga agagctgcaa
    33661 cgcgaaacct tgtcgattgt gggctggcgt gatgtcccca ctaacgaagg cgtgctgggt
    33721 gaaatcgccc tctcctctct gccccgcatt gagcaaattt tcgttaacgc tccggcaggc
    33781 tggcgtccgc gggatatgga gcgccgtctg tttatcgccc gccgccgcat tgaaaagcgt
    33841 ctcgaagccg acaaagactt ctacgtctgt agcctgtcga atctggtgaa catctataaa
    33901 ggtctgtgta tgccggcgga tctgccgcgc ttttatctgg atcttgcgga cctgcgtctg
    33961 gaatcggcca tctgcctgtt ccaccagcgc ttctccacta acaccgtacc gcgctggccg
    34021 ctggcgcagc cgttccgcta cctggcgcat aacggtgaaa tcaacaccat caccggtaac
    34081 cgccaatggg cgcgtgcgcg tacctataaa ttccagacgc cgcttatccc tgatctgcac
    34141 gacgccgcac cgttcgtcaa cgaaaccggc tctgactcca gttcgatgga taacatgctg
    34201 gaactgctgc tggcaggcgg gatggatatc atccgcgcca tgcgtctgtt agtgccaccc
    34261 gcctggcaga acaacccgga tatggacccg gaactgcgtg ccttctttga ctttaactcc
    34321 atgcatatgg agccgtggga tggcccggcg ggcatcgtga tgtccgacgg tcgttttgcc
    34381 gcctgtaacc tcgaccgtaa cggtctgcgt ccggcgcgct acgtcatcac caaagataag
    34441 ctcatcacct gcgcctctga agtcggtatc tgggattacc agcctgacga agtggtcgaa
    34501 aaaggccgcg tcgggccagg cgaactgatg gttatcgaca cccgcagtgg gcgtattctg
    34561 cactcggcag aaaccgatga cgatctgaaa agccgccatc catataaaga gtggatggag
    34621 aaaaacgtcc gccgactggt accgtttgaa gatctgcccg atgaagaagt gggtagccgc
    34681 gaactggacg acgacacgct tgccagctac cagaaacagt ttaactacag cgcggaagag
    34741 ctggactccg taattcgcgt actgggcgaa aacggtcagg aagcggtcgg ttcgatgggc
    34801 gatgataccc cattcgccgt gctctccagt cagccgcgca ttatttacga ctacttccgc
    34861 cagcagtttg cccaggtgac taacccgcca atcgacccgc tgcgtgaagc gcatgttatg
    34921 tcgctcgcca ccagtatcgg tcgtgaaatg aacgtctttt gcgaagcaga gggccaggcg
    34981 caccgtttaa gctttaaatc gccgattctg ctctactccg atttcaaaca gctcacgacg
    35041 atgaaagagg agcactaccg cgcagatacg ctggatatca cctttgacgt cactaaaacc
    35101 acgctcgaag cgacagtcaa agagctgtgc gacaaagccg aaaaaatggt acgtagcggc
    35161 accgtgctgc tggtgctctc cgaccggaat atcgctaaag atcgcctgcc ggttccagcc
    35221 ccgatggcgg ttggcgcgat ccagacccgt ctggtcgatc aaagcctgcg ttgcgatgcc
    35281 aacatcatcg tcgaaaccgc cagcgcccgc gatccgcacc acttcgccgt gttgctgggc
    35341 ttcggcgcga cggctattta tccatacctt gcctatgaaa cgctgggccg cctggtagac
    35401 acccatgcga ttgccaaaga ttatcgtacc gtgatgctca actaccgtaa cggcatcaac
    35461 aaaggcttgt acaaaatcat gtccaaaatg ggcatctcca ccatcgcctc ttaccgctgc
    35521 tcgaaactgt ttgaagcggt cggtctgcac gatgatgtag tgggcctgtg cttccagggg
    35581 acggtcagcc gcattggtgg ggcgagcttt gaagacttcc agcaggatct gctgaacctg
    35641 tcgaaacgtg cctggctggc gcgtaagccc atcagccagg gcggcctgct gaaatacgtc
    35701 cacggcggcg aataccacgc ttacaacccg gacgtggtgc gcacgctgca acaggcggta
    35761 caaagcggcg agtacagcga ctatcaggaa tacgcgaagc tggttaatga gcgtccggca
    35821 accacgctgc gcgatctgct ggcaattacg ccgggtgaaa acgcggtcaa cattgctgat
    35881 gttgaaccgg caagcgaact gtttaaacgc tttgataccg ccgcgatgtc tatcggcgcg
    35941 ttaagcccgg aagcccacga ggcgctggcg gaagcgatga atagcatcgg cggtaactcg
    36001 aactccggtg aaggcggcga agacccggcg cgctatggca ctaacaaagt gtcgcgcatc
    36061 aagcaggtgg cttctggtcg cttcggcgtt actccggcgt atctggtcaa tgccgacgtc
    36121 attcagatta aagtcgccca gggcgcgaag ccgggcgaag gcggtcagtt gccgggtgac
    36181 aaagtcactc cttacatcgc caaactgcgc tattcggtgc ccggagtgac gctgatctcc
    36241 ccgccgccgc accacgatat ctactctatc gaggacttag cgcagctcat tttcgacctc
    36301 aagcaggtta acccgaaagc gatgatctcc gtgaagctgg tttccgaacc gggcgtaggc
    36361 accatcgcga ctggtgtggc aaaagcttat gccgatttaa tcaccatcgc aggctatgac
    36421 ggtggcaccg gcgcaagccc gctgtcgtca gtgaaatacg caggttgccc gtgggagctg
    36481 gggcttgttg aaacccagca ggcgctggtt gccaatggtc tgcgtcataa gatccgtttg
    36541 caggtcgatg gcggcctgaa aaccggtgtt gatatcatca aagcggcgat tctcggcgca
    36601 gaaagcttcg gcttcggcac tggcccaatg gtcgcgctcg gctgtaaata tctgcgtatt
    36661 tgccacctga acaactgcgc aacgggtgtg gcaactcagg atgacaaact gcgtaagaat
    36721 cactatcacg gcctgccgtt caaggtgacg aattactttg agtttatcgc ccgtgaaacc
    36781 cgcgagctga tggcacagct gggggtaacg cggctggtgg atctgattgg tcgcaccgac
    36841 ctgctgaaag agctggacgg tttcaccgcc aaacagcaga aactggcgct gtcgaagctg
    36901 ctggagaccg ccgaaccgca tctaggtaag gcactctact gcaccgaaaa caacccgccg
    36961 tttgataacg gcctgctgaa cgcgcagttg ctgcaacagg cgaaaccgtt tgtcgatgga
    37021 cgccagagca aaaccttctg gttcgatatc cgcaataccg atcgctccgt gggcgcgtcg
    37081 ctttcaggct atatcgccca gacgcacggc gatcaggggc tggcagccga tcctatcaaa
    37141 gcgtacttca acggcaccgc aggccagagt ttcggtgtat ggaacgcggg cggcgtggaa
    37201 ctgtacctga ccggggatgc caacgactat gtcggtaaag gcatggcggg cggcttaatc
    37261 gccattcgtc ctccggttgg ttccgccttc cgcagccatg aagcaagtat tatcggcaac
    37321 acctgcctgt atggcgcgac cggtggtcgt ctgtatgccg caggccgcgc gggtgaacgt
    37381 ttcggcgtgc ggaactccgg tgctatcacc gtggtagaag gcattggcga caacggctgt
    37441 gaatatatga cgggcggtat tgtctgtatt ctgggtaaaa ccggcgttaa cttcggtgcg
    37501 ggcatgaccg gcggcttcgc ttacgttctc gatgaaagcg gtgatttccg caaacgcgtt
    37561 aacccggaac tggtcgaggt cttaaacgtt gacgatctgg cgatccatga agagcatctg
    37621 cgcggtctta tcaccgagca tgttcagcat actggctctc agcgcggtga agagattctg
    37681 gcgaactggt caaccttcgc cactaaattt gcgctggtta aaccgaagtc cagtgatgta
    37741 aaagcactgc tgggtcaccg tagtcgtagc gcagcagagt tgcgcgtgca ggcgcagtaa
    37801 ggggtagcaa caatgagtca gaatgtttat caatttatcg acctgcagcg cgttgatccg
    37861 cctaagaaac cgctgaagat ccgcaaaatt gagtttgttg aaatttacga gccgttttcc
    37921 gaaggccagg ccaaagcgca ggctgaccgc tgcctgtcgt gcggcaaccc atactgcgag
    37981 tggaaatgtc cggtacacaa ctacatcccg aactggctga agctcgccaa cgaggggcgt
    38041 atttttgaag cggcggaact gtcgcaccag accaacaccc tgccggaagt ttgcggacga
    38101 gtctgcccgc aagaccgtct gtgcgaaggt tcctgcactc tgaacgatga gtttggcgcg
    38161 gtgaccatcg gcaacattga gcgttatatc aatgataaag cgttcgaaat gggctggcgt
    38221 ccggatatgt ccggcgtgaa gcaaaccggt aaaaaagtgg cgattatcgg cgcaggcccg
    38281 gcaggtctgg cgtgtgcgga tgtcctgacg cgtaacggcg taaaagccgt tgtcttcgac
    38341 cgtcatccag aaattggcgg gctgctgacc ttcggtattc cggccttcaa gctggaaaaa
    38401 gaggtaatga cgcgtcgccg tgaaatcttc accggcatgg gtattgaatt caaactcaat
    38461 accgaagtgg gccgcgacgt gcagctggac gatctgctga gtgattacga tgccgtcttc
    38521 cttggcgtcg ggacttatca gtcaatgcgc ggcgggctgg aaaacgaaga cgccgatggc
    38581 gtgtacgcag cgctgccgtt ccttatcgcc aacaccaaac agttaatggg ctttggtgaa
    38641 acccgcgacg aaccgttcgt cagcatggaa ggcaaacgcg tggtggtcct tggcggtggc
    38701 gacactgcga tggactgcgt gcgtacgtcc gtgcgccagg gagcgaagca cgttacctgt
    38761 gcctatcgtc gtgatgaaga gaacatgccg ggttcccgcc gcgaagtgaa aaacgcgcgg
    38821 gaagaaggcg tagagttcaa attcaacgtc cagccactgg ggattgaagt gaacggtaac
    38881 ggcaaagtca gcggcgtaaa aatggtacgt accgaaatgg gcgaaccgga tgccaaaggc
    38941 cgtcgccgcg cggagatcgt tgcaggttcc gaacatatcg ttccggcaga tgcagtgatc
    39001 atggcgtttg gtttccgtcc acacaacatg gaatggctgg caaaacacag cgtcgagctg
    39061 gattcacaag gccgcatcat cgccccggaa ggcagcgaca acgccttcca gaccagcaac
    39121 ccgaaaatct ttgctggcgg cgatatcgtc cgtggttccg atctggtggt aaccgctatt
    39181 gccgaaggtc gtaaggcggc agacggtatt atgaactggc tggaagttta agctctgtcc
    39241 cagcgccgcc tcctcagaaa agagtcggcg ctgaaattct cctttctttc tggaaagcgc
    39301 ctcgcataat ctgaagaaaa ccaatgtaat acgctcatct ggattgttac cggtagatgc
    39361 ccggcgtata gctgattcca ttattcaacg cagcgccata taaagggaca gataatggaa
    39421 tcgctctcag agagaacctc aacaggctac cagcaaatcc acgacggtat tattcacctg
    39481 gtcgatagcg cccggacgga aacggtacgt agcgttaacg cgctgatgac cgcgacatac
    39541 tgggaaattg gccgacgaat tgtcgaattt gaacaaggtg gcgaggcaag ggctgcgtat
    39601 ggtgcgcagc taatcaagcg actatcaaag gatttaagtc taaggtataa gcgtgggttc
    39661 tctgcaaaaa acttacgcca aatgaggctt ttttacctct tttttcaaca tgttgaaatt
    39721 cgccagacag tgtctggcga attaacacca ttgggaattc cgcagacacc atctgcagaa
    39781 ttcccatcgg caaagatttg gcagacgctg tctgccaaat tgagaggctg tttgatattt
    39841 ccacagcttt tgtattgcat ctcctatttt cggtttgtat attcatgcaa ataaacgaag
    39901 gaaagttgcc atgatttaca ttgaacagct tgaattaatc cataaaagtg gtgatgtgtt
    39961 gtatccagta aaaataacca gaaaatcatc aggaaaaact gccttccatc ttgttccatt
    40021 cggcttaaat aagactcacg accttctaga ggtggaagat gcttcagaag caattcggct
    40081 ggtgattgat gaacgtcatt ccattcgctg cagtacactt acagcaacta ttacgaataa
    40141 aaagggcaag cgaattaagc ggacaggtat atacagtatc aagggtgtta acataaaaga
    40201 atacaacgtc aggtaatggc acagagcggt ccgtcagttc aggtttggct ctgtgccaaa
    40261 gatgggtcag gtcacacctg atctaataaa tttaagccat taaatcagcc ttaaccttca
    40321 ccaccacctt tttaatctca cccggctcgc cgacaacgca tcctggttta tgcggttcac
    40381 ttggcataaa cacggcgaac attcccggtt ttaagatgat ggcttgctcg ttatcaatgg
    40441 tgctgcaaag ctgataatca tcctcatggt ggaactcttc acactggcgc gcagtgcctg
    40501 ccatgccaaa cagaatccgt tcctcaccgt ttaataacag ctggatatca atgtattgct
    40561 cgtgcaattc cgcttttttc tcgacgggcg attgagtgtt aaacgtcatg acattcataa
    40621 agatattgtc gccctgtaat tcgtaacgac ccggcgcttt ttcttgcggt ctggcagcta
    40681 atgccagcgt taacgcgtcc tgtaacgcag gatgtaaccc agcagacggt aatgactgta
    40741 cttcacccat catcataatt tttctccctg ggccaacagc gcagccccaa gtaaacctgc
    40801 atcgtggcgg tagtgcgccg ccagtaaatc aacatgaaat gccgctggct cctgcgccag
    40861 atacgttttc accaacgcca gatacccttc tgccagacca acgctgccac cgaccaccac
    40921 gcactggcaa tcagttgtgg ctttaatatc agcgatcagc cttgccagca catgtgcgga
    40981 gcggtgaatc agttgctgcg cctgctcgtc gccctgcccg gcgcgtgtga aaatagttct
    41041 cgcatccgcg cccatgagtt caccttgcgc tgccgctgca ataccgcgac cagaagcaat
    41101 cgcttccacg caacctgtgc gtccacagcc gcagactggg ccgtgtggat cggcaagcgt
    41161 atgcccgatg tgccccgcca gaccgctagg gccggtaagc agtttaccgc cgctcactac
    41221 accgccgccg acgccagtgg aaacggtgat aaacaccata tcggttatat cgccttccag
    41281 cgcctgatac tctgcccatg ctgcggcctg cgcgtcgtta atggcaatgg tcggcaaatt
    41341 ggaaagttgt tccagcgttt tgactaacgg aaagtgtagc aatccaccaa gattatgcgg
    41401 attcagcgcc agcaagctgc cgtcgcgaat aattccggtt gaagcgatgg caacctgctg
    41461 cgcatgagct tgcaacgggg cgactaacgc ggctaaggca tcacgcaacg cctgcggagt
    41521 ctggctggct ggtgtcggaa gttctcggcg atcgcggatc tgcccgtcag cgccaatcag
    41581 cgcggcggca agtttagtac cgccgatatc aatcgccaac gtggtcatag caccgccttt
    41641 ttcatcgctg tgttgtacca ctgacaaatg tgttcaagac gcgtaatggc agaaccgacc
    41701 gtcaccgccc acgcgccgtg gcgcatcgca tctgccgcct gagcaggcgt gttgtaacgc
    41761 ccttcggcaa tcacccgaca tccggcgtcg ctcaacgttt tcaccagcgc cagatccggc
    41821 tcttctggcg tttcaggcgt ggtatagcca gaaagcgtag tgccaataat ttcggctccc
    41881 agcttttggc atgccaggcc gtcttccggc gttgagcagt cggtcatcgc cagtaaaccg
    41941 tgatggtgaa tacgtgccag cagcgtttca acaggcaccg gacgcgggcg gtcggtgccg
    42001 tcaatggcga taatgtccgc gcccgcctgc gccagcgcat caacatcttc aatataggcc
    42061 gtgatgcgta ccggagaatc ctccagatcg cgtttcacaa ttccaataat cggcacgctc
    42121 accaccgcac gcgtggcttg cagatttgcc acaccttcaa tgcgaatggc aaccgcgccc
    42181 gcctgttctg ccgctaatgc catggcagcg acgatttcgg gtttatcgag cgggctgtcc
    42241 ggaaccggct ggcaggagac aatcaggcca ccgttagcag cgattttttg atccagttgt
    42301 gcaagtaacg acatacatct tcccttagcg aaaggcccgg tacagagacc gggcaacagg
    42361 attaactttt ggttttgact aaatcgtttt tggcgctgcc aaatggcacg gcaccgctaa
    42421 atggtttgcc gtcgatagcg tcatgagtac gcaatgcttc cgggcgcagc caacgctgaa
    42481 cgcgggaagg catatccaga ccaatcagca ggatcaccac aaatgtcaga ctgaacgata
    42541 gcgatgccag cgcagtaccc agatccagac gttgagcgat caacgcgccg atgattgggg
    42601 ccagtgcgcc gcccaatgcg ccaacgttgt aggtaaagcc caagcccgct gcacgctggt
    42661 cggtatcgaa ataaccgcca atcagtttcg gtaagatccc ggcgatccct tgtccaagca
    42721 tttgctggaa gaacagtaac agaccgagca cccagacgtt tgcgccgcca atcgcaaata
    42781 ccggaataat caacagctgc gaggccaaca ggctacaaac gtaggctttg cgggttccca
    42841 gccagtcacc gaggaagccg ccgacacagc accccaccgc agccccaaag ccgctaaaga
    42901 acagcacatt ggcgacagta tgcgggttat aagccagatc ggttttcaga tacgttggca
    42961 gcagcgcctg aatcggccat gagtagagga aagcaaacaa cacgaccacc atcagcatta
    43021 cgcccgttgg ccagcgttta cccgtacttt gcaccataaa gctgataaag attgcggcgc
    43081 ataacagccc aagaacagcg acgatcgcgg cattttgcag gttaccggcg aagcaaaacc
    43141 acagcgcagt agccgccgcc agtgtcatta cgatattggc aatgcgatgt tcaccacggt
    43201 agagaatatc taccatcgtg cgtactggtg ctttacctgc atgtttctct ttccagtctt
    43261 ccgcttccgg gatgttttta cgcagccaga gagcaaagat gataggcaaa atgccgataa
    43321 agaacagcgc acgccagccc cagaccggaa ccaccaggct atagacctga gcggcaacga
    43381 cggcccccac agagaagcct gaaatcagaa aaccactggc tttgttacgc agatgttttg
    43441 gccagctttc aatgacatag gtggcgctgg aaccgtattc acccgccatc cccatgccga
    43501 tgaccagacg cgcgataaac atggtgatgt agcctggcgc aaagccgcag gccagcgtcc
    43561 cggccgagaa gagaacgatg ctggtgacca ttgccagacg acgcccgtag cggtcaccca
    43621 tagcgccgag catcaggccg ccgaaccagc gagagataaa ggctgcggag atcagacttg
    43681 ccgcctgcac cgtcgtcagc ccgaattcgc cctgtacttc ggtgagtacc agggcgatta
    43741 aaacgaaatc aaaaccgtca agcagatatc ccaaccaggc agcggaaaat gcgcgccatt
    43801 gtgcacggtt gagatggcga taccacggga tattctgggt tgtagtactc attgtgagtc
    43861 tcccgcggtg ggcgatgccc acacgctttg gtataaaaat tgtagggtac agatgcgttt
    43921 atttcccctc acccggtagg ggcgagcgag gggaaacaac tcacccgcgc tcttgcatca
    43981 actgctgggc cagcgccttc agttctggca gatatttttc atctaccggt ccaaacggtt
    44041 tgcggcacag cggcacagaa acgacatcca tataatggag gacagttttc aggccgcgga
    44101 atacgcccgt tttgatcagt aaatcaatga ctttattgca ttcagtttgc agtttctgcg
    44161 cggtctggat atcgccttct ttcagcgcct taacgatccc ctgatagcgc cagcccatga
    44221 tgttgtaggt actaccgata ccaccatcag cgcccgccag cagaccagag gcgaagattt
    44281 cgtcgtaacc gttatagagc acaagatcag gatgttcacg acggatctgc tccatctgat
    44341 agagatcgcc agaggtctgt ttcagcgcac ctacgccagg caatgtaaca agtgtgttga
    44401 tctgatccag ggtcagtttt accccactca gggctggaat gttgtacacc accatcggca
    44461 aaccatccgc cgaatcaata attgcccgat agtgatcgca gtgttcttca aagctgaaag
    44521 gatagtagaa cggcgtgacg gcggagacgg catcgaagcc ataacgttta gccgatgccg
    44581 caagttgttg gctttcggcg gtgctgacgc aaccgacgtg ggcgatgagt ttaatcttac
    44641 ctttcgcctc ttcggcgacg atttccagta cctgttcacg ctcggaaagg ctttgtacaa
    44701 aggcctcgcc ggtcgaacca cccacgtata aaccgtcgat gccctgctga atattgaact
    44761 gaaccaggcg acgcagactc gctttatcca gcgcttgttg ttggtcaaaa ggagtcagga
    44821 gtgcagccat tacgccacgt aaattcgttg ccataaatac ctctgaagtg atgcttgtct
    44881 gataaacgat atacctttat acctgttata ccagatcaat taagcaacac cccatacaga
    44941 aagcttataa tgcgatctgc ttcactaaag tggcattatt tctttttgtt ggtggtctga
    45001 ccgaaagcgt gccaggtagc agagacgctg ttgagatgcg attgcaacgc acgatcggct
    45061 tcgtcaggat catgacggcg gatcgcatca acgatcgcaa tatgctgttg ataactaacg
    45121 ttgttatgtt cgtgtagtgc ctgatcggta accgttgggc gtgcggcaat aagccagtcg
    45181 agcagggcaa cgtggatcgc catgaagatt gggttaccgg ggatctccgc cagcacgcgg
    45241 tggaaatcaa cgtctgaacg aatgaatgcc gcgttgttat ccagcgactg actgttgatt
    45301 tccagtgctt ttgccagcaa atcgatttgc tcatcggtgg catgttcagc cgcatagcgc
    45361 accagactgg attcaaagaa cagacgtaat tgttcgaaat gggcaatccc accgggatga
    45421 gaaaggaaat ctttcgccat gccggaaagc tcaccgatga tagtgtccgc agaaggacgc
    45481 gagacgcgag cgcgttcgcc gttgtttatt tgcaccagac ctttgcgttt taacgctgcc
    45541 agcgcttcac gcaccgaagg acgcccgacg ttaaagaacg ccatcagttc gcgttcagac
    45601 ggtaattgtt caccttcgcc aaattcacga cggcggatca tctgttccag ctcttcttcc
    45661 accatttcgg agagtttttt acgcgccagc gggcggctac gcaagttgcg accaattgca
    45721 ggtgaagaat cttcggtttg cgaatcaaat gcgttcataa ggcccattct gtaaggtcag
    45781 tgtgattaac atcatcagtg acatcctatc acaggattga aagtagggga aaatggcagg
    45841 tttttctctt tgtgcctcat cattaccata attaacggaa taattaacta ttgcgaaaaa
    45901 ttaatgtgac gcagataaaa acatcccgtt tgaattattt ataagactat tcacgagcat
    45961 tatgaatatt atgaatgcgt tcttgcaaaa taatcataag cgcatatttt ttaatgaaaa
    46021 attacctcac ttacaattaa aaacacgaca tccgcaccat aaatagactt gcaaaaaata
    46081 taacatcatt gttttcaatc tgccgtttat gggattgacc gttttctttt gacacggagt
    46141 tcaacaatgt tcggcataat tatatctgtc atcgtattaa ttacgatggg ctatttgatc
    46201 ctgaaaaact acaaacctca ggtggtgctg gctgccgcag gtatcttcct gatgatgtgc
    46261 ggtgtctggt tagggttcgg tggtgtactc gatcccgcca aaagcagcgg ctacttgatc
    46321 gtcgatattt ataatgaaat cctgcgcatg ctgtccaacc gcattgccgg attggggcta
    46381 tcgattatgg cggtgggcgg tatgcccgct acatggagcg cataggggcc agtcgcgcga
    46441 tggtgagctt gttaagccgc ccgttaaaac tcattcgctc accgtatatt attctgtcgg
    46501 caacttacgt catcggtcaa atcatggcgc agtttattac cagcgcctcc ggtctgggta
    46561 tgttgctgat ggtcacctta tttccgacac tggtgagtct gggagtaagt cgtctctctg
    46621 cggtggcggt tatcgcaacc acaatgtcca ttgagtgggg aattctggaa acgaactcca
    46681 tttttgcagc ccaggtcgcg ggaatgaaaa ttgccactta cttcttccac taccagcttc
    46741 cggtcgcctc ttacgtcatt atctcggtgg cgatctccca ctttttcgtg caacgcgctt
    46801 ttgacaaaaa agataaaaat atcaatcacg aacaagcaga gcaaaaagct ctcgataatg
    46861 tcccgccgct ctattacgcc attttacctg tgatgccgtt aatcctgatg ctcggctcgc
    46921 tgttcctcgc ccacgtcggg ctgatgcagt cagaactgca tctggtggtg gtgatgttac
    46981 tgagtttgac ggtgacgatg tttgttgagt tcttccgcaa gcataacttg cgcgaaacaa
    47041 tggacgatgt gcaggcgttt tttgacggca tgggtacgca gtttgccaac gtggtaacgc
    47101 tggtggtcgc gggtgaaata tttgcgaaag gcttaacgac gattggcact gtcgatgcgg
    47161 ttatcagggg tgcggagcat tctggtctgg gcggtattgg cgtgatgatt attatggcgc
    47221 tggtcattgc catttgtgcc attgtgatgg gctctggcaa tgcgccgttt atgtcatttg
    47281 ccagtcttat tccgaatatc gcagccggac tacatgtacc agcggttgta atgattatgc
    47341 cgatgcattt tgccacgacg ctagcgcgcg cggtttcgcc gattactgcg gtggtggtcg
    47401 ttacgtcagg aattgcaggc gtttcgcctt ttgcggtggt gaagcgaaca gcgatcccca
    47461 tggcagtcgg tttcgtggtg aatatgattg ccacaatcac gctattttat taagccatta
    47521 aaagacaaaa caggccacca gggcctgttt ttgtattact tcacaacgcg taatgtcggt
    47581 cgaccaccgc gtggtggctg cggaggttca tcgtcaggat gagtgtcatc atcgtgatct
    47641 ggcttgtcgc catcaataac cgacataacg gtttcgttgt ctgccgatgc ctcttcatca
    47701 ttcatgatgc tggtatcttc atcgtaggca gcttcaggct caaacattgt gcctgcgcca
    47761 ttttcacggg cgtagatagc cagcacggca gccagcggca cagaaacctg acgcggaatg
    47821 ccgccaaagc gcgcgttaaa gcgcacctca tcattcgcca gttccagatt gccgacagca
    47881 cgcggcgcaa tgttgagtac gatttgcccg tcacgcgcat attccatagg aacctgcacg
    47941 ccagggagcg tcacatccac caccaggtgc ggcgtgagct ggttatccag caaccactca
    48001 tagaatgcac gcagcagata gggacgacgt ggtgttagct gtgacaaatc catacagatt
    48061 aactccggcc cagacgcatt tcacgttctg cttcagttaa agaagcaagg aaagagtcac
    48121 gctcaaagac gcgggtcata tagcctttca gctctttcgc acccgggccg ctgaactcga
    48181 tgcccagttg cggcagacgc cacagcagcg gagcaagata gcaatcgacc aggctgaact
    48241 catcgctcag gaagtacggc ttctgaccga agaccggcgc aatcgccagc agttcttcgc
    48301 gcagttgctt acgtgcggca tctgcttcag aagctgaacc gttgatgatg gtgttcatca
    48361 gcgtgtacca gtctttttcg atgcgatgca tgtacagacg gctttcaccg cgagctaccg
    48421 ggtaaacagg catcagtggc ggatgcggga aacgctcatc cagatattcc ataatgatgc
    48481 gagattccca cagggtcagc tcacgatcca ccagggtcgg aacgctctga ttcgggttga
    48541 ggtcaatcag atcctgaggc ggattgtcct tttccacgtg ttcgatctcg aaacttacac
    48601 ctttctcagc cagcacaatg cggacctgat ggctatagat gtcagtagga ccggaaaaca
    48661 gcgtcattac cgaacgtttg ttggcagcga cagccatgaa aacctccagg tatagtcaga
    48721 atttttactg ctaccagcca ccaggtggcc agtcagaagt tgtgttaccc agtaaggaac
    48781 gactctcttt gttcgaaaat caaacaaaaa atgagcaata cccgacattt gggcagaaaa
    48841 ttggatgata gtttaccaga ttttgcgacc tttgtggtga gtcgatgccg gaaatgggga
    48901 aaaagagatg cgctttagtc tgaaatagtt gacttagtcc cttattggcg atgtggtttt
    48961 tgttttacct gtctgtcagg tggcagcaaa aagcaacttt ccagttttta cgctgattca
    49021 gattttagct ataaaaaaac ccgccgaagc gggttttttc gaaaattgtt ttctgccgga
    49081 gcagaagcca attaacgttt ggagaactgc ggacgacgac gtgctttacg cagaccgact
    49141 ttcttacgtt caacctgacg agcgtcacga gtaacgaagc cagctttacg cagttcagaa
    49201 cgcagggact cgtcgtattc catcagagcg cgggtgatac cgtgacggat cgcaccagcc
    49261 tgaccagaga taccaccacc tttaacggtg atgtacaggt ccagtttctc aaccatgtcg
    49321 accagttcca gcggctgacg aactaccatg cgggcagttt cacgaccgaa gtactgttcc
    49381 agagaacgtt ggttgattac gattttaccg ttgcccggtt tgatgaaaac gcgagctgcg
    49441 gaacttttgc ggcgaccagt gccgtagtat tgattttcag ccattgccta taatcccgat
    49501 tagatgtcaa gaacttgcgg ttgctgtgcc gcgtggttgt gctcgttacc cgcgtaaact
    49561 ttcagtttac ggaacatagc acgacccagc gggccttttg gcaacatgcc tttaaccgcg
    49621 atttcaatca cacgctcagg acggcgagca atcatctctt caaaggtcgc ttgtttgata
    49681 ccaccgatgt ggccggtgtg gtgatagtac actttgtcag tacacttgtt gccggttaca
    49741 gcaactttgt cagcgttcag aacgatgatg taatcaccgg tatctacgtg cggagtgtat
    49801 tccgctttgt gcttaccgcg caggcgacga gccagttcag tagccagacg gcccagagtt
    49861 ttaccggtcg cgtcaacaac ataccagtcg cgttttacgg tttctggttt agctgtaaaa
    49921 gttttcatta aaagcttacc caataaatag ttacacgttg gtgaacaccc aaacgtcttc
    49981 aattgttgag gttcacacga caaagtccgg caaacctacc ccttcgaata gcctatgcca
    50041 gcacacaaaa agttttggga aaaaactttc ttgtaacgtg gggtcgcagg attatagaga
    50101 agtcggggtc aaagatcgac ccctttttgt gatttgtgac aggttttaac ccgccaaatg
    50161 ctcgcgcttc agatactctt cgctttgcat ctcttgcaga cgtgacaggc aacgctggaa
    50221 ctcaaacttc agccgatcgc cctgataaat ttcatacagc ggcacttctg cactcaccac
    50281 taatttgaca tggcgctcgt aaaactcatc caccagcgca ataaagcgcc gcgcttcgct
    50341 ctccatcaac cgcgtcataa ctggtacatc aaacaacatg accgtatgaa agaggcgtga
    50401 gagcgcaata tagtcatgct ggctgcgggc atcgacacac aaggtggtaa aagagacagc
    50461 aagcgtctga ttctcagcgc ccattgtcgc cagcggtcga tggttgattt ctaacgtcgg
    50521 tgaattttcg cgtttcgctc ccgccagcgc caaccatagt ttatccattt gtgcccgggt
    50581 ttcatcgtgg agtggcgaaa gccacagatg cgcctgagtg agtgtacgca gtcgataatc
    50641 aacaccagcg tccacgttca ttacatcaca atgctgttta atggcatcga ttgcaggcag
    50701 aaaacgcgca cgttgcaagc catttcgata aagttcgtcc ggcggaatat ttgacgtcgc
    50761 taccagggta ataccgcggg cgaacagggc tttcatcaga ccgccaagta gcatggcgtc
    50821 ggtaatatca gaaacaaaaa attcgtcaaa acagagcacg tcagtttcgg ctttaaagcg
    50881 atcggcaata atttccagcg gatcggtctg cccctgtaag gcagttagct cttcgtgcac
    50941 ccgcagcata aaacggtgaa agtgcaggcg ctgtttccgc tctcccggca ggctttgata
    51001 gaaaaggtcc atcagccagg ttttcccgcg tcctacaccg ccccacatat ataagccacg
    51061 cactggcgta tgctttgtgt cttcgcgttt accccacagc ttaccgaccc gcgccattag
    51121 cccactcgtc ctgggggctg gtggcctgct attgatgagt tcttgataaa taatttccag
    51181 gcggctgacg gcctcttttt gaacgtcgtc gggttgatgg ctgccttcat tgagcgcctt
    51241 caggtattgc gatgttgggg taacgctttg catgatctta ttattattcc ttgaataatc
    51301 ggtgcgccgt tgttcacggt tgacgaaaaa aaggccgttc tacactacgc gatatgcagt
    51361 cgggattcca cttctgtgga attaacggtt atagtggcat aatcagccgc aggcatggag
    51421 cctgaagcca acaccctacg gaaacaaaag acaacgggag atgttcatga cctgggaata
    51481 tgcgctaatt gggttagtcg tcggcatcat tattggtgct gtggccatgc gttttggtaa
    51541 tcgtaaacta cgccagcaac aggcgttgca gtacgaactg gaaaagaata aagctgaact
    51601 ggacgagtat cgcgaagagc tggttagcca ctttgcccgc agcgcggaat tactggatac
    51661 catggcgcac gactatcgcc agctgtatca gcacatggcg aaaagctcca gcagcctgct
    51721 gccggaactg tctgctgaag caaacccgtt ccgtaatcgt ctggcagagt ctgaagccag
    51781 caacgatcag gcaccggtgc agatgcctcg cgactattct gaaggtgcat ccggcctgct
    51841 gcgtactggc gcgaagcgcg actaatttat ttttcgggcg cagccattgc gccctcctct
    51901 tctctccctc cccgactatc atttaatctg gtgtctcatt gttagccgtc tgaaaattca
    51961 ataacatcaa actgttttga atctcttttc ttatcattca ggtacgagag caggaataat
    52021 gaaaaaacaa acccagctgt tgagtgcatt agcgttaagt gtcgggttaa ctctctcggc
    52081 gtcatttcag gccgtcgcgt cgattccagg ccaggttgcc gatcaggccc ctctccccag
    52141 tctggctcca atgctggaaa aagtgcttcc ggcagtggtg agcgtacggg tggaaggaac
    52201 ggccagtcag ggacagaaaa tcccggaaga attcaaaaag ttttttggtg atgatttacc
    52261 ggatcaacct gcacaaccct tcgaaggttt aggttccggt gtcatcatca acgccagtaa
    52321 aggctatgtg ctgaccaaca accatgtgat taatcaggca cagaaaatca gtattcagct
    52381 caatgatggg cgcgagtttg atgccaaact gattggtagc gatgaccaga gcgatatcgc
    52441 cctgttacaa attcaaaacc cgagcaaatt aacgcaaatc gctattgccg actccgataa
    52501 attgcgcgtc ggtgattttg ccgtagcggt cggtaaccca tttggccttg ggcaaaccgc
    52561 cacctctggc attgtttccg cattaggccg cagcgggttg aatcttgaag gtctggaaaa
    52621 ctttatccag acagatgctt ccattaaccg cggtaactcc ggcggtgcac tattaaacct
    52681 taacggtgag ttaattggca tcaacactgc aatccttgcg cctggcggcg ggagcgtcgg
    52741 gattggattt gccatcccca gtaatatggc gcgaacactg gcgcagcagc ttatcgactt
    52801 tggtgaaatc aaacgcggtt tgttaggcat caaaggcacc gagatgagtg ccgatatcgc
    52861 caaagccttc aaccttgacg tgcagcgtgg cgcgtttgtc agcgaagtgt tgccaggttc
    52921 tggctcggca aaagcgggcg tcaaagcggg cgatattatt accagcctca acggcaaacc
    52981 gctgaatagc tttgctgagt tgcgctctcg tatcgcgact acagagccgg gcacgaaagt
    53041 gaagcttggc ctgctgcgta acggcaaacc actggaagta gaagtgacgc ttgataccag
    53101 cacctcttcg tcggccagcg ctgaaatgat cacgccagcg ctggaaggtg caacgttgag
    53161 cgatggtcag ctaaaagatg gcggcaaagg tattaagatc gatgaagttg tcaaaggaag
    53221 cccagctgct caggcaggct tgcaaaaaga cgatgtgatc attggcgtca accgcgatcg
    53281 ggtgaactcg attgctgaaa tgcgtaaagt gctggcggca aaaccggcca tcatcgccct
    53341 gcaaattgta cgcggcaatg aaagcatcta tctgctgatg cgttaatgtc gtaaaccggg
    53401 catcaggctt acgtgtgatg tccggttaac tcgtggtatg ctgctgccgt tccctttttt
    53461 aatgacgcct ccatcatgtt tgtgaagctc ttacgttccg ttgcgattgg attaattgtc
    53521 ggcgctattc tgctggttgc catgccttcg ctgcgcagcc ttaacccgct ttccactccg
    53581 caatttgaca gtaccgatga gacgcctgcc agctataatc tggcggttcg ccgcgccgcg
    53641 ccagcggtgg ttaacgttta caaccgtggt gtgaacacca actctcacaa ccagcttgag
    53701 atccgcaccc tgggatccgg tgtaatcatg gatcaacgcg gttatatcat caccaataaa
    53761 cacgtcatca acgacgccga tcagatcatc gtcgccttac aggatggacg tgtatttgaa
    53821 gcattgctgg tgggatctga ctctctaacc gatctggcgg tacttaaaat taatgccact
    53881 ggcggtttac ctaccattcc aattaatgca cgtcgcgtac cgcacattgg cgacgtagta
    53941 ctggcgatcg gtaacccgta caacctcggg cagaccatta cccaagggat tattagtgcc
    54001 acgggtcgaa tcggtctgaa ccctaccggg cggcaaaact tcctacaaac cgatgcttcc
    54061 attaaccacg gtaactctgg tggcgcgctg gtgaactcgc tgggagaact gatgggcatt
    54121 aacacgctgt cgtttgataa gagtaacgat ggcgaaacgc cggaaggtat cggctttgcg
    54181 attcctttcc agttagcaac caaaattatg gataagctga tccgcgatgg gcgcgtgatc
    54241 cgcggctaca ttggcattgg tggacgtgag atcgcaccac tgcacgcgca gagcggtggt
    54301 atagatcaac tgcaagggat cgtggttaat gaagtgtcac ctgacggccc ggcggcgaat
    54361 gcgggtattc aggtcaacga tctgattatt tcggtggata acaaaccggc catctctgct
    54421 ctggagacga tggatcaggt ggcagaaatt cgccctggtt cggtgatccc ggttgtagtg
    54481 atgcgtgatg ataagcagtt aacgctgcag gtcaccattc aggaatatcc ggcaaccaat
    54541 taagtcgagt gctcaaaaca aaaaaccgga gtctgtgctc cggtttttta ttattcgcta
    54601 atcaattact tattaacgaa ctcttcgccc agggcgatat ctttcttgag cgtatccagc
    54661 ataccttcca gcgcgttctg ttcaaatgcg ctcagggtac cgatagattt acgctcttcc
    54721 acgccgtttt tacccagcag cagcggttga gagaagaaac gggcgtactg accgtcgcct
    54781 tcaacgtagg cacattcgac aacgccttgt tcgccctgca gtgcacgaac cagagacaga
    54841 ccaaaacgtg cagctgcctg gcccatagac agggttgcag acccgccacc ggctttcgct
    54901 tcaaccacct cagtacccgc gttctggata cgtttggtca gatcagccac ttcctgctcg
    54961 gtaaaactaa cgccaggaac ctgtgacagc agcggcagaa tggtaacacc agagtgaccg
    55021 ccaataaccg gcacttcaac ttcgcctggc tgtttgcctt tcagttccgc aacaaaggtg
    55081 ttggaacgaa tgatatccag cgtggtaacg ccgaacagtt tgtttttgtc ataaacaccg
    55141 gcttttttca gcacttcagc agcaattgca actgtggtgt taaccgggtt agtgataata
    55201 ccaatgcacg ctttcgggca ggttttcgca acttgctgta ccaggttttt cacgatgccg
    55261 gcgttaacgt taaacaggtc ggaacgatcc atacccggtt tacgcgctac acctgcagag
    55321 ataagaacga catctgcgcc ttccagcgcc ggagtcgcat cttcaccaga aaaacctttg
    55381 attttcacag cagtagggat atggctcaga tcgacagcca caccgggagt cactggagcg
    55441 atatcataca gagagagttc tgaacctgaa ggcagttggg tttttaacag tagtgcaagc
    55501 gcctggccaa taccgccagc agcgccgagg actgcgactt tcatcctaaa ctccttatta
    55561 tattgataaa ctaagatatg ttgctccgct gccgcgacct taatccacaa aattgccgtt
    55621 tacaatgacc acatatcaag aatgtgtagt cacgcaagtt tagcgtttat gcatttaatt
    55681 gccgtaatca ggaacctaac ttacgtaatt aacagtcgct tatgcattag cgcaacattc
    55741 caacaggtgg tgacaatata ccctaccgtt cagccaaaac aacatcaatt tgataacaat
    55801 taatttactt ttaagcagaa tttgcatgcc gtgacgcagg catgtttctc aataacgaaa
    55861 tttgataaaa tcccgctctt tcataacatt atttcagcct tcttcagggc tgactgtttg
    55921 cataaaaatt catctgtatg cacaataatg ttgtatcaac caccatatcg ggtgacttat
    55981 gcgaagctcg gctaagcaag aagaactagt taaagcattt aaagcattac ttaaagaaga
    56041 gaaatttagc tcccagggcg aaatcgtcgc cgcgttgcag gagcaaggct ttgacaatat
    56101 taatcagtct aaagtctcgc ggatgttgac caagtttggt gctgtacgta cacgcaatgc
    56161 caaaatggaa atggtttact gcctgccagc tgaactgggt gtaccaacca cctccagtcc
    56221 attgaagaat ctggtgctgg atatcgacta caacgatgca gttgtcgtga ttcataccag
    56281 ccctggcgcg gcgcagttaa ttgctcgcct gctggactca ctgggcaaag cagaaggtat
    56341 tctgggcacc atcgctggcg atgacaccat ctttaccacc cctgctaacg gtttcaccgt
    56401 caaagacctg tacgaagcga ttttagagct gttcgaccag gagctttaat ctctgccccg
    56461 tcgcttctgg cggcggggaa aatgttgctt atccctctca accccctgct ttcccctgcg
    56521 attaatttaa cgaatagtgc gttttactgc gacatgtcat tcacataatg aatacatacg
    56581 gtaaaaaaag cacattatgc aaaattcatt atctaattga aaatactaga attaaaaata
    56641 aatgaccgtg tttttaattc ttttttgtta ttaaaattca cattttcaac acttagtatc
    56701 aactgaaaca gttagcatgg tattaattag ttcaataatt agtatgtgct tgattttgtg
    56761 atatgggtca cgaaacaaag gcccagctaa aagattatgt cgaggtaaaa atcatgaaaa
    56821 tcaaaaccac tgtagctgca ttaagcgtac tttctgttct ctctttcggt gcattcgctg
    56881 ccgactccat tgatgctgca caagcacaaa atcgtgaagc aatcgggacc gtatccgtaa
    56941 gtggtgtggc gtcttcgcca atggatatgc gtgaaatgct gaacaaaaaa gcggaagaga
    57001 aaggcgcaac ggcctaccag attactgaag ctcgtagcgg tgacacctgg cacgctacgg
    57061 ctgaactgta caaataaacc ctcatcgtct tgtccgacga tattgccccc ggttcggggg
    57121 ctttttttgc gctaatgacg aacattaaaa cgcaaatgcc cttccagctc tttctctgcc
    57181 tcatcaaata gcaatattaa cgcgccaaaa cggcgacgcg ttttctctcc cagatgaaca
    57241 aattcaatct caagtggtag cggcaggaca tcgttcatta acacatccca tagtgagtcg
    57301 agatcgcgta ccttatcttt cgccagacca aaggtttggc taaagtcacg ataaaaatcc
    57361 tcctgactct caatctcatc aaaatcaaag gtataaatat tcatctattg ccaccgtcac
    57421 gtttcgcggc gagttctgcc gtgcatcgct aagtatagcc atgaaaaaac cgacactttt
    57481 ggcgtcggtt ttgacctaac tatcggtcaa cgcatgttga tacttatgga gcatacccgc
    57541 cagccgatga accggttccg tcacctgcgg tggcgcttgc cagatgcgta gcttttcctg
    57601 gtagatttca agttcttcca gcaactggcc aaagtaccga cgacgtttat catcgctacg
    57661 ggcagatatc acatggtctg ctgtgcggcg catttgtcgg tgaaacgccg ataaatcctc
    57721 gttaaccggg atcggcgcat cacgcaggcg ctggtgcgcg ataatcatcg tcagcgccag
    57781 gcgaaatttc ggcaaatccc ctgggaactt attcatcagc aaaaacagct gctgataaag
    57841 tgccgggagg tggttctctt tacgacgtgc cacattggta gtcatcgcgg aaacagcggc
    57901 agaaacaaac tgattaagca gtacacgtcc ggtcctgtcg cgcgatttat cccgcacaag
    57961 caaaataacg gtgaacgcga gcacacagcc gacgatttgc cctaatgcgc tgtcgagaaa
    58021 ctgactgaaa tggaaagtca tcgggttatc cagcacgata atatttatgg tgctggccag
    58081 cgcccccatc gagcccagtc gccgttgctg tacttctata ccgaggaaaa atcccagcac
    58141 tgccaggcta atacacagca gcaacatgct ctgttgggta ttagggataa tcaccaaaaa
    58201 gtagagcagc cctaacggca gcgcggccag cgtcccgtag ataaagtcga tcgccaccat
    58261 gcgtggattc ggcaaacgca ttgccagtga cgtcactacc gcaatcatca ccattgcacc
    58321 actgccggaa gtccagcccg tccacagcca gaaaagcgtg cccagaatgc aggaaagtgt
    58381 ggttcgccag aagttaacca tcgcatgatg acgttcggct gactctactt tgacttccgg
    58441 ttcgccttgc aggatctctt cttcggtggc gttgattttt gtgttactga taacgccgcg
    58501 cttgagaagc tgataacgcg ttgccgccgc gacccagcta taaatggtga caggcgtttc
    58561 ccgttccccg gtccaggcga taactctccg caggcgtttg agctgcttgt ggacgtcctg
    58621 cgcggtttct accggcgtgt caaaaaattc gcggaaagta tcagtgatca attccgggcg
    58681 cgtattctga ataagataag tttcgcagga ttgggtaatc agcgtcagcg atagcgtatt
    58741 gatcgctttt aaacgtcgat tggcccgcgc ccagcgggaa gattccatat tcaggttgct
    58801 gcgcatgcct tgtagcgccg tggtgcgtcg caccaggtcg ccccaggctt tatcgacaac
    58861 ttcaccatcg ccatgcttga tacagagttg cattaattga tattgcgcaa ccagcaaact
    58921 ttccagctct cgatccactt cttgtttgat cgatcgcgga gaaaagagca aatccgccat
    58981 aatcgcacac acaataccga taacgatctc gctacaacgt tcgacggcaa actgcggcgt
    59041 aagcaatggt tccggctgaa tggtgatcac aatgatcagc gcggtataac cggccagccc
    59101 ccacgcgtac gagttttcta ttcgtaccag cgaggatatc caggtacaaa aaccggccca
    59161 gatacagcac accagaatca tcaataatgg tgcgcggatc atcgcaatga tgatcaccag
    59221 tccggcaata cagccaataa atgtgccgat gatgcgcaaa aagccacgat aacgaatagc
    59281 gccagaatac ggttcacctc ccgcagcaaa ggccggaccg gcggcaacaa tcgccgctgt
    59341 cagtaccgcc cagcgtggcg tttccagctg gaagtgaaag ccaacaaaca gcgccagtac
    59401 aatggcggtc gccagtttta ccgcaaagcg aatatgttgg ttagcaatgg agaaaatacc
    59461 catcgtgatt aaccaaactc acgcaggcga tgggccattt tacggaagaa cgaatcctgg
    59521 ctttcgtcgc gatcttgttt gccagtgacc accactgtag cagtggtgcc cgcaggccag
    59581 atgttctctt gctggttgtc gagacgaata cgaaccggaa cacgttgcgc aagacgcacc
    59641 cattcaaggt tagagtctat agtcgccatc cctttgtcgt cacgcgtgct gctggcgttg
    59701 gtgacccctg cggcaacact atcaacagtc cctttcagca ctttgttact gccaagcggc
    59761 gtgatctctg cacgataccc cggacgcacc ccttccagct tagtttcttc catataggcc
    59821 agtacataga aggagttctg tttcaccagc gcaaccgccg ttgatcctcg agtaataaac
    59881 tcaccggtat agacgttgag gttggtcacc cagccatctg ctggcgcgcg gatcaccgtg
    59941 cgttcaagat ccagttttgc cagatcgcgg gtcgcctgcg ctttcgctaa ctgatgcaga
    60001 accgtttgta gtacgttgtt agcctggtcg atctcttcgc gagacatcgc ctgcacaccg
    60061 agacggttac gacgtccggc ctcctggcgt ttctcctgtg ccagtacctg ataataagca
    60121 acatcggctt gcgcttcctc aagcgccttt tgatagcgcg gctggtcgat ggtgaacagt
    60181 atctgtcctt ttttcaccag ctggttatca tgaacattca cctgggtaat gagtccagaa
    60241 acgtccggcg cgatcgcaat gacgtcagcg ctaaagcgcg cgtcacgcgt ccagggggat
    60301 tcggtgtaat agacctaggc attaaaaatt gcgatgaagg ccagaatgac taatacgacc
    60361 gtgatggccg tacgggagaa ttttcttatt agtgttttca cttcaacctc aaacgaacag
    60421 tcgcgatatc aaataaaaca agcagcaata gagcgcggtg ttgaacaacg ccggatgcca
    60481 gacaaagtcg tagatacctg ttggcacaag tacccggcgc accagccaga aaatcgccag
    60541 tgataaaagc aattcaaaaa atatcggtgg gaaggacagc ccaaacacca cgataacggg
    60601 aaacagactc atgttgacct tggttgtata gagagagcag gcgttattat tttcagcatc
    60661 tgtcgccgca gagaagggca tggaaagccg ggcgagagca acattgctgt agattgatat
    60721 ttaatatatt agcgtaactg ttatgctatt atctatatta gactggcccc ctgaatctcc
    60781 agacaaccag tatcacttaa ataagtgata g
//
LOCUS       DADMHC010000004        42179 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.004, whole genome shotgun sequence.
ACCESSION   DADMHC010000004 DADMHC010000000
VERSION     DADMHC010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 42179)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42179)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42179
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.004"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(188..264)
                     /locus_tag="JNZ57_000188"
     tRNA            complement(188..264)
                     /locus_tag="JNZ57_000188"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(228..230),aa:Arg,seq:acg)
     gene            complement(268..360)
                     /locus_tag="JNZ57_000189"
     tRNA            complement(268..360)
                     /locus_tag="JNZ57_000189"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(324..326),aa:Ser,seq:gct)
     gene            complement(676..861)
                     /gene="csrA"
                     /locus_tag="JNZ57_000190"
     CDS             complement(676..861)
                     /gene="csrA"
                     /locus_tag="JNZ57_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HAY8826543.1"
                     /translation="MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHR
                     EEIYQRIQAEKSQQSSY"
     gene            complement(1096..3726)
                     /gene="alaS"
                     /locus_tag="JNZ57_000191"
     CDS             complement(1096..3726)
                     /gene="alaS"
                     /locus_tag="JNZ57_000191"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HAY8826544.1"
                     /translation="MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGM
                     NQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDY
                     FKHDAIQFAWELLTSEKWFALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDN
                     KGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQ
                     FNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDL
                     SNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKL
                     VGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDG
                     ETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAMI
                     RVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGD
                     KGELKGANFSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSA
                     THLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRVVEDLVNAQIRRNL
                     PIETNIMDLEAAKAKGAMALFGEKYDERVRVLSMGDFSTELCGGTHASRTGDIGLFRI
                     ISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNNLADKVRSVLERTR
                     QLEKELQQLKEQAAAQESANLSSKAIDVNGVKLLVSELSGVEPKMLRTMVDDLKNQLG
                     STIIVLATVAEGKVSLIAGVSKDVTDRVKAGELIGMVAQQVGGKGGGRPDMAQAGGTD
                     AAALPAALASVKGWVSAKLQ"
     gene            complement(3854..4354)
                     /gene="recX"
                     /locus_tag="JNZ57_000192"
     CDS             complement(3854..4354)
                     /gene="recX"
                     /locus_tag="JNZ57_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HAY8826545.1"
                     /translation="MTESTSRRPAYARLLDRAVHILAVRDHSEQELRRKLAAPIMGKN
                     GPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGIS
                     REATEKAMRECDIDWCALARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQDI
                     WRNFAD"
     gene            complement(4597..5658)
                     /gene="recA"
                     /locus_tag="JNZ57_000193"
     CDS             complement(4597..5658)
                     /gene="recA"
                     /locus_tag="JNZ57_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HAY8826546.1"
                     /translation="MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTG
                     SLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDP
                     IYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
                     GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKF
                     YASVRLDIRRIGAVKEGENVVGSETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELV
                     DLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEIEKKVRELLLSNPNS
                     TPDFSVDDSEGVAETNEDF"
     gene            complement(5738..6235)
                     /gene="pncC"
                     /locus_tag="JNZ57_000194"
     CDS             complement(5738..6235)
                     /gene="pncC"
                     /locus_tag="JNZ57_000194"
                     /EC_number="3.5.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide-nucleotide amidase"
                     /protein_id="HAY8826547.1"
                     /translation="MTDSELMQLSEQVGQALKARGATVTTAESCTGGWVAKVITDIAD
                     SSAWFERGFVTYSNEAKAQMIGVREETLAQHGAVSEPVVVEMVIGALKAARADYAVSI
                     SGIAGPDGGSEEKPVGTVWFAFATARGEGITRRECFSGDRDAVRRQATAYALQTLWQQ
                     FLQNT"
     gene            complement(6380..7465)
                     /gene="mltB"
                     /locus_tag="JNZ57_000195"
     CDS             complement(6380..7465)
                     /gene="mltB"
                     /locus_tag="JNZ57_000195"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HAY8826548.1"
                     /translation="MFKRRYVTLLPLFVLLAACSSKPKPTETETTTGTPSGGFLLEPQ
                     HNVMQMGGDFANNPNAQQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTT
                     SVKPPSGPNGAWLRYRKKFITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIG
                     VETRWGRVMGKTRILDALATLSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFA
                     GAMGYGQFMPSSYKQYAVDFSGDGHINLWDPVDAIGSVANYFKAHGWVKGDQVAVMAN
                     GQAPGLPNGFKTRYSISQLATAGLTPQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYT
                     ITRYNHSTHYAMAVWQLGQAVALARVQ"
     gene            7721..8284
                     /gene="srlA"
                     /locus_tag="JNZ57_000196"
                     /gene_synonym="gutA"
     CDS             7721..8284
                     /gene="srlA"
                     /locus_tag="JNZ57_000196"
                     /gene_synonym="gutA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIC"
                     /protein_id="HAY8826549.1"
                     /translation="MIETITHGAEWFIGLFQKGGEVFTGMVTGILPLLISLLVIMNAL
                     INFIGQHRIERFAQRCAGNPVSRYLLLPCIGTFVFCNPMTLSLGRFMPEKYKPSYYAA
                     ASYSCHSMNGLFPHINPGELFVYLGIASGLTTLNLPLGPLAVSYLLVGLVTNFFRGWV
                     TDLTTAIFEKKMGIQLEQKVHLAGATS"
     gene            8281..9240
                     /gene="srlE"
                     /locus_tag="JNZ57_000197"
                     /gene_synonym="gutE"
     CDS             8281..9240
                     /gene="srlE"
                     /locus_tag="JNZ57_000197"
                     /gene_synonym="gutE"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIB"
                     /protein_id="HAY8826550.1"
                     /translation="MTCIRIEKGTGGWGGPLELEATPGKKIVYITAGTRPAIVDKLAQ
                     LTGWQAIDGFKEGEPAEAEIGVAVIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQY
                     IVEDIYVSGVKEENITVVGDATPQPSSVGRDYDTSKKITEQSDGLLAKVGMGMGSAVA
                     VLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLA
                     LICSFPLLSPFLGPGAVIAQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPV
                     GLSLAEARQDTVRVGVPSVLVSRFLTGAPTVLIAWFVSGFIYQ"
     gene            9251..9622
                     /gene="srlB"
                     /locus_tag="JNZ57_000198"
                     /gene_synonym="gutB"
     CDS             9251..9622
                     /gene="srlB"
                     /locus_tag="JNZ57_000198"
                     /gene_synonym="gutB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIA"
                     /protein_id="HAY8826551.1"
                     /translation="MTVIYKTTITRIGASATDALSDQMLITFREGAPADLEEYCFIHC
                     HGELKGALHPGLQFTLGQHRYPVTAVGSVAEDNLRELGHVTLRFDGLNEAEFPGTVHV
                     AGPVPDDIAPGSVLKFESVKE"
     gene            9626..10405
                     /gene="srlD"
                     /locus_tag="JNZ57_000199"
     CDS             9626..10405
                     /gene="srlD"
                     /locus_tag="JNZ57_000199"
                     /EC_number="1.1.1.140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sorbitol-6-phosphate dehydrogenase"
                     /protein_id="HAY8826552.1"
                     /translation="MNQVAVVIGGGQTLGAFLCHGLVAEGYRVAVVDIQSDKAANVAQ
                     EINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAFISDFQL
                     GDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG
                     GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDK
                     VPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVMF"
     gene            10510..10869
                     /gene="gutM"
                     /locus_tag="JNZ57_000200"
     CDS             10510..10869
                     /gene="gutM"
                     /locus_tag="JNZ57_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GutM"
                     /protein_id="HAY8826553.1"
                     /translation="MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVGR
                     SSGRFKPRVVVAIALDDQQRIVDTLFMKGLTVFARPQKIPAITGMHAGDLQPDVIFPH
                     DPLSQNALSLALKLKRG"
     gene            10936..11709
                     /gene="srlR"
                     /locus_tag="JNZ57_000201"
                     /gene_synonym="gutR"
     CDS             10936..11709
                     /gene="srlR"
                     /locus_tag="JNZ57_000201"
                     /gene_synonym="gutR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucitol operon DNA-binding transcriptional
                     repressor SrlR"
                     /protein_id="HAY8826554.1"
                     /translation="MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILE
                     HAGTVIRTYGGVVLNKEESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGST
                     VLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENA
                     FEHFSFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNV
                     VCSLESVDKLITDAGIDPAFRQALEEKGIDVIITGESNE"
     gene            11702..12666
                     /gene="gutQ"
                     /locus_tag="JNZ57_000202"
                     /pseudo
     CDS             11702..12666
                     /gene="gutQ"
                     /locus_tag="JNZ57_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311591.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-5-phosphate isomerase GutQ"
     gene            complement(12663..14177)
                     /gene="norR"
                     /locus_tag="JNZ57_000203"
     CDS             complement(12663..14177)
                     /gene="norR"
                     /locus_tag="JNZ57_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311592.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide reductase transcriptional regulator
                     NorR"
                     /protein_id="HAY8826555.1"
                     /translation="MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALL
                     RYDSRQFIPLAIDGLAKGVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLI
                     PGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGTLSNA
                     LLIEQLESQNMMPGDATPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETG
                     TGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFE
                     MADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREE
                     VLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRLGLSRVVLSAGAR
                     NLLQHYRFPGNVRELEHAIHRAVVLARATRNGDEVILEAQHFAFPEVTLPPPEAAAVP
                     VVKQNLREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRLGMKD"
     gene            14363..15802
                     /gene="norV"
                     /locus_tag="JNZ57_000204"
     CDS             14363..15802
                     /gene="norV"
                     /locus_tag="JNZ57_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic nitric oxide reductase
                     flavorubredoxin"
                     /protein_id="HAY8826556.1"
                     /translation="MSIVVKNNIHWGGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEK
                     NVLIDTVDHKFSREFVQNLRNEIDLADIDYIVINHAEEDHAGALTELMAQIPDTPIYC
                     TANAIDSINGHHHHPEWNFNVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYLTGDA
                     VLFSNDAFGQHYCDEHLFNDEVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNL
                     PVDMIATSHGVVWRDNPTQIVELYLKWAADYQEDRITIFYDTMSNNTRMMADAIAQGI
                     AETDPRVAVKIFNVARSDKNEILTNVFRSKGVLVGTSTMNNVMMPKIAGLVEEMTGLR
                     FRNKRASAFGSHGWSGGAVDRLSTRLQDAGFEMSLSLKAKWRPDQDALELCREHGREI
                     ARQWALEPLPQSTVNKVVKEETSATTTADLGPRMQCSVCQWIYDPAKGEPMQDVAPGT
                     PWSEVPDNFLCPECSLGKDVFEELASEAK"
     gene            15799..16932
                     /gene="norW"
                     /locus_tag="JNZ57_000205"
     CDS             15799..16932
                     /gene="norW"
                     /locus_tag="JNZ57_000205"
                     /EC_number="1.18.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavorubredoxin reductase NorW"
                     /protein_id="HAY8826557.1"
                     /translation="MSNGIVIIGSGFAARQLVKNIRKQDATIPLTLIAADSMDEYNKP
                     DLSHVISQGQRADDLTRQTAGEFAEQFNLHLFPQTRVTDIDAEARVVKSQNNQWQYDK
                     LVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLIVGGGLIGSELAMDF
                     CRAGKAVTLIDNAASILASLMPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGILA
                     TLDHQRSIEVDAVIAATGLRPETALARRAGLTINRGVCVDSYLQTSNDDIYALGDYAE
                     INGQVLPFLQPIQLSAMVLAKNLLGNNTPLKLPTMLVKIKTPELPLHLAGETQRQDLR
                     WQINTERQGMVARGVDDADQLRAFVVSEDRMKEAFGLLKTLPM"
     gene            complement(17060..19312)
                     /gene="hypF"
                     /locus_tag="JNZ57_000206"
     CDS             complement(17060..19312)
                     /gene="hypF"
                     /locus_tag="JNZ57_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HAY8826558.1"
                     /translation="MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGD
                     GVEVRLREDPETFLVQLHQHCPPLARIDSVEREPYIWSQLPTEFTIRQSAGGAMNTQI
                     VPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCP
                     ACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGNIVAI
                     KGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIV
                     LVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISN
                     EQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRRSRGYVPDALALPPSFKNVP
                     PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPKYVV
                     HDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGK
                     NGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYPE
                     TASVQQQNWSVLARAIERGINAPLASSCGRLFDAVAAALGCAPATLSYEGEAACALEA
                     LAASCHGVTHPVTMPLVDNQLDLAAFWQQWLNWQAQVNQRAWAFHDALAQGFAALMRE
                     QATMRGITTLVFSGGVIHNRLLRARLSHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA
                     RWLAGEVQNG"
     gene            complement(19465..19992)
                     /gene="hydN"
                     /locus_tag="JNZ57_000207"
     CDS             complement(19465..19992)
                     /gene="hydN"
                     /locus_tag="JNZ57_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport protein HydN"
                     /protein_id="HAY8826559.1"
                     /translation="MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRI
                     HVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYG
                     AMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKL
                     EQLSAEKRRRTALMF"
     gene            complement(20141..21151)
                     /locus_tag="JNZ57_000208"
     CDS             complement(20141..21151)
                     /locus_tag="JNZ57_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417194.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HAY8826560.1"
                     /translation="MTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAVEESG
                     YRPNLLARNLSAKSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHS
                     AEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSVW
                     CDHKQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIA
                     NGKWTPASGAEGVETLLERGAKFSALVASNDDMAIGAMKALHERGVAVPEQVSVIGFD
                     DIAIAPYIVPALSSVKIPVTEMIQEIIGRLIFMLDGGDFSPPKTFSGKLIHRDSLIAL
                     SR"
     gene            21411..22811
                     /gene="ascF"
                     /locus_tag="JNZ57_000209"
     CDS             21411..22811
                     /gene="ascF"
                     /locus_tag="JNZ57_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS cellobiose/arbutin/salicin transporter
                     subunit IIBC"
                     /protein_id="HAY8826561.1"
                     /translation="MAKNYAALARSVIAALGGVDNISAVTHCMTRLRFVIKDDQLIDS
                     PTLKTIPGVLGVVRSDNQCQVIIGNTVSQAFQEVVSLLPGDMQPAQPVGKPKLTLRRI
                     GAGILDALIGTMSPLIPAIIGGSMVKLLAMILEMSGVLTKGSPTLTILNVIGDGAFFF
                     LPLMVAASAAIKFKTNMSLAIAIAGVLVHPSFIELMAKAAQGEHVEFALIPVTAVKYT
                     YTAIPALVMTWCLSYIERWVDRITPAVTKNFLKPMLIVLIAAPLAILLIGPIGIWIGS
                     AISALVYTIHGYLGWLSVAIMGALWPLLVMTGMHRVFTPTIIQTIAETGKEGMVMPSE
                     IGANLSLGGSSLAVAWKTKKPELRQTALAAAASAIMAGISEPALYGVAIRLKRPLIAS
                     LISGFICGAVAGMAGLASHSMAAPGLFTSVQFFDPANPMSIVWVFAVMALAVVLSFIL
                     TLLLGFEDIPVEEAAA"
     gene            22877..24301
                     /locus_tag="JNZ57_000210"
     CDS             22877..24301
                     /locus_tag="JNZ57_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HAY8826562.1"
                     /translation="MSVFPEGFLWGGALAANQSEGAFREGGKGLTTVDMIPHGEHRMA
                     VKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAEMGFKVFRTSIAWSRLFPQGD
                     EITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRY
                     ARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASA
                     LAAKIAHEVNPQNQVGCMLAGGNFYPYSCKPEDVWAALEKDRENLFFIDVQARGAYPA
                     YSARVFREKGVTIDKALGDDEILKNTVDFVSFSYYASRCASAEMNANNSSAANVVKSL
                     RNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDELAANGEINDDYR
                     ISYLREHIRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVYVDRDDAGNGT
                     LTRTRKKSFWWYKKVIASNGEDLE"
     gene            complement(24460..24930)
                     /gene="hycI"
                     /locus_tag="JNZ57_000211"
     CDS             complement(24460..24930)
                     /gene="hycI"
                     /locus_tag="JNZ57_000211"
                     /EC_number="3.4.23.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation peptidase HycI"
                     /protein_id="HAY8826563.1"
                     /translation="MTDVLLCVGNSMMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAPE
                     NDIVAIRELRPTRLLIVDATDMGLNPGEIRIIDPDDIAEMFMMTTHNMPLNYLIDQLK
                     EDIGEVIFLGIQPDIVGFYYPMTQPIKDAVETVYQRLEGWEGNGGFAQLAVEEE"
     gene            complement(24923..25333)
                     /locus_tag="JNZ57_000212"
     CDS             complement(24923..25333)
                     /locus_tag="JNZ57_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HycH family protein"
                     /protein_id="HAY8826564.1"
                     /translation="MSEKVVFSQLSRKFIDENDATPAEAQQVVYYSLAIGHHLGVIDC
                     LEAALTCPWDEYLAWIATLEAGSEARRKMEGVPKYGEIVIDINHVPMLANAFDKARAA
                     QTSQQQEWSTMLLSMLHDIHQENAIYLMVRRLRD"
     gene            complement(25330..26008)
                     /locus_tag="JNZ57_000213"
                     /pseudo
     CDS             complement(25330..26008)
                     /locus_tag="JNZ57_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417199.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
     gene            complement(26008..26550)
                     /gene="hycF"
                     /locus_tag="JNZ57_000214"
     CDS             complement(26008..26550)
                     /gene="hycF"
                     /locus_tag="JNZ57_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycF"
                     /protein_id="HAY8826565.1"
                     /translation="MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCA
                     ACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQEYELAVWK
                     KEDFLQQSRFALCNCRVCNHPFAVQKEIDYAIALLKHNGDSRAENHRESFETCPECKR
                     QKCQVPSDRIELTRHMKEAI"
     gene            complement(26560..28269)
                     /locus_tag="JNZ57_000215"
     CDS             complement(26560..28269)
                     /locus_tag="JNZ57_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase large subunit"
                     /protein_id="HAY8826566.1"
                     /translation="MSEEKLGQHYLAALNEAFPGVVLDHAWQTKDQLTITVKVNYLPE
                     VVEFLYYKQGGWLSVLFGNDERKLNGHYAVYYVLSMEKGTKCWVTVRVEVDANKPEYP
                     SVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPA
                     PTTDAETYEFINELGDKKNNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHR
                     GMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILL
                     EVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIR
                     RDLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTIGIGRLDPEIARDFSNVGP
                     MVRASGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLD
                     NLPGGPLMVEGFTYIPHRFALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPT
                     LRYMLRGNTVSDAPLIIGSLDPCYSCTDRMTVVDVRKKKSKVVPYKELERYSIERKNS
                     PLK"
     gene            complement(28287..29210)
                     /gene="hycD"
                     /locus_tag="JNZ57_000216"
     CDS             complement(28287..29210)
                     /gene="hycD"
                     /locus_tag="JNZ57_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycD"
                     /protein_id="HAY8826567.1"
                     /translation="MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYR
                     DIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLY
                     LFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNI
                     TDTVYHWPLSQSIPLVLALCTCAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFG
                     VMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFEN
                     SMARLRLDITPRITWAGFGFAFLAFVSLLAA"
     gene            complement(29213..30956)
                     /gene="hycC"
                     /locus_tag="JNZ57_000217"
                     /pseudo
     CDS             complement(29213..30956)
                     /gene="hycC"
                     /locus_tag="JNZ57_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311606.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit 3"
     gene            complement(30953..31564)
                     /locus_tag="JNZ57_000218"
     CDS             complement(30953..31564)
                     /locus_tag="JNZ57_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HAY8826568.1"
                     /translation="MNRFVIADSTLCIGCHTCEAACSETHRQHGLQSMPRLRVMLNEK
                     ESAPQLCHHCEDAPCAVVCPVNVITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGS
                     RPLDIPANANTPKAPPAPPAPARISTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCP
                     TKALHLVDNTDIARVSKRKRELTFNTDFGDLTLFQQAQSGEAK"
     gene            complement(31689..32150)
                     /gene="hycA"
                     /locus_tag="JNZ57_000219"
     CDS             complement(31689..32150)
                     /gene="hycA"
                     /locus_tag="JNZ57_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase regulator HycA"
                     /protein_id="HAY8826569.1"
                     /translation="MTIWEISEKADYIAQRHRRLQDQWHIYCNSLVQGITLSKARLHH
                     AMSCAPDKELCFVLFEHFRIYVTLADGFNSHTIEYYVETKEGEDKQRIAQAQLSIDGM
                     IDGKVNIRDREQVLEHYLEKIAGVYDSLYTAIENNVPVNLSQLVKGQSPAA"
     gene            32362..32712
                     /gene="hypA"
                     /locus_tag="JNZ57_000220"
     CDS             32362..32712
                     /gene="hypA"
                     /locus_tag="JNZ57_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HAY8826570.1"
                     /translation="MHEITLCQWALELIEQQAAKHGAKRVTGVWLKIGAFSCVETSSL
                     AFCFDLVCRGSVAEGCKLHLEEQEVECWCETCQQYVTLLTQRVRRCPQCHGDMLQIVA
                     DDGLQIRRIEIDQE"
     gene            32716..33588
                     /gene="hypB"
                     /locus_tag="JNZ57_000221"
     CDS             32716..33588
                     /gene="hypB"
                     /locus_tag="JNZ57_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HAY8826571.1"
                     /translation="MCTTCGCGEGNLYIEGDEHNPHSAFRSAPFAPAARPKMKITGIK
                     APEFTPSQTEEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAAR
                     KQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQV
                     NTGKGCHLDAQMIADAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEG
                     EDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIACAREVNPEIEIILISATSGEG
                     MDQWLNWLETQRCA"
     gene            33579..33851
                     /gene="hypC"
                     /locus_tag="JNZ57_000222"
     CDS             33579..33851
                     /gene="hypC"
                     /locus_tag="JNZ57_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 3 maturation protein HypC"
                     /protein_id="HAY8826572.1"
                     /translation="MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRV
                     GQWVLVHVGFAMSVITEAEARDTLDALQNMFDVEPDVGALLYGEEK"
     gene            33851..34972
                     /gene="hypD"
                     /locus_tag="JNZ57_000223"
     CDS             33851..34972
                     /gene="hypD"
                     /locus_tag="JNZ57_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HAY8826573.1"
                     /translation="MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGH
                     THAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRV
                     PGKQGSLLQAKARGADVRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQ
                     AKARDVQNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYNFIASDF
                     HRPLVVAGFEPLDLLQGVVMLVEQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCV
                     NGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPH
                     QCPLFGNTCNPQTAFGALMVSSEGACAAWYQYRQQESEA"
     gene            34969..35979
                     /gene="hypE"
                     /locus_tag="JNZ57_000224"
     CDS             34969..35979
                     /gene="hypE"
                     /locus_tag="JNZ57_000224"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311613.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation carbamoyl dehydratase
                     HypE"
                     /protein_id="HAY8826574.1"
                     /translation="MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLDLA
                     QLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPCYLSCGFILEE
                     GLPMETLKAVVTSMAETARTAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPANIHWG
                     AQTLTAGDVLLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKA
                     LRDATRGGVNAVVHEFAAACGCGIEISESALPVKPAVRGVCELLGLDALNFANEGKLV
                     IAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPR
                     IC"
     gene            36053..38130
                     /gene="flhA"
                     /locus_tag="JNZ57_000225"
                     /pseudo
     CDS             36053..38130
                     /gene="flhA"
                     /locus_tag="JNZ57_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311614.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase transcriptional activator
                     FlhA"
     gene            complement(38167..38520)
                     /locus_tag="JNZ57_000226"
     CDS             complement(38167..38520)
                     /locus_tag="JNZ57_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide-stimulated promoter family
                     protein"
                     /protein_id="HAY8826575.1"
                     /translation="MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKR
                     LDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLIDDKRP
                     VPELPEKYRPKKPRE"
     gene            complement(38597..38731)
                     /locus_tag="JNZ57_000227"
     CDS             complement(38597..38731)
                     /locus_tag="JNZ57_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8826576.1"
                     /translation="MIPELIISGEEANGEFLMLVPGKMLFCSFCVMLMKQVRKIASVE
                     "
     gene            38807..41368
                     /gene="mutS"
                     /locus_tag="JNZ57_000228"
     CDS             38807..41368
                     /gene="mutS"
                     /locus_tag="JNZ57_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HAY8826577.1"
                     /translation="MSAIENFDAHTPMMQQYLRLKAQHPEILLFYRMGDFYELFYDDA
                     KRASQLLDISLTKRGASAGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATS
                     KGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEP
                     ADRETMAAELQRTNPAELLYAEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFG
                     TRDLVGFGVENAPRGLCAAGCLLQYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRN
                     LEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQTIGALQDF
                     TAGLQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELRAQLETVDSAPVQA
                     LREKMGEFAELRDLLERAIIDTPPVLVRDGGVIASGYNEELDEWRALADGATDYLERL
                     EVRERERTGLDTLKVGFNAVHGYYIQISRGQSHLAPINYMRRQTLKNAERYIIPELKE
                     YEDKVLTSKGKALALEKQLYEELFDLLLPHLEALQQSASALAELDVLVNLAERAYTLN
                     YTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYM
                     RQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILH
                     NATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKME
                     DVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELES
                     ISPNAAATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV"
     gene            41474..42131
                     /gene="pphB"
                     /locus_tag="JNZ57_000229"
                     /pseudo
     CDS             41474..42131
                     /gene="pphB"
                     /locus_tag="JNZ57_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311617.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase"
BASE COUNT         9963 a        11600 c        11020 g         9596 t
ORIGIN      
        1 ttactttact gcagattttt tgataccgct actaaagccg tatcaagtaa gagatggtgc
       61 attcgggagg attactcgcc ttgcggctcg cccttcgggt cgttgctaaa gcaacgttat
      121 cctccctagt gcctgcggtt ataccgccac ctcttccata ccttcatcgc tgaaagtacg
      181 tagaatatgg tgcatccggg aggattcgaa cctccgaccg ctcggttcgt agccgagtac
      241 tctatccagc tgagctacgg atgcaaatgg cggtgaggcg gggattcgaa ccccggatgc
      301 agcttttgac cgcatactcc cttagcaggg gagcgccttc agcctctcgg ccacctcacc
      361 acacgcctct tacgagtgct tcgaagaact tgtttatcgc tcatcgtcgc tgcgtggcgc
      421 acatattact ttctgagact tataagtcaa acaatttttc ccacactttt atcgtttgca
      481 cacttcacgc tcaattagtc tgtaaaaacg tcaaaaagag tgttttatct acagaaaaac
      541 ggaggtctgg cagatagcag taatgcaaaa aaatggagac ttaagttgaa tgaacgggag
      601 taaagcgaaa agactataga gtgaaggaga aattttgagg gtgcgtctca ccgataaaga
      661 tgagacgcgg aaagattagt aactggactg ctgggatttt tcagcctgga tacgctggta
      721 gatctcttca cggtgaacag aaacttcctt cggggcattt acgccaatac gtacctggtt
      781 gcccttcacc cctaaaactg tcacggtgac ctcatcccca atcatgaggg tctcaccaac
      841 tcgacgagtc agaatcagca ttctttgctc cttgaaagat taaaagagtc gggtctctct
      901 gtatcccggc attatccatc atataacgcc aaaaagtaag caatgacaaa cacattacat
      961 gtaagcagtc atggcattac attctgttaa acctaagttt agccgatata cacaacttca
     1021 acctgacttt atcgttgtcg atagcgttaa tgcgaatgcc gtgaagcgag tccacggcat
     1081 tgcctgacgc ttatattatt gcaatttcgc gctgacccag cctttcacac tggctaacgc
     1141 tgcaggtaag gccgcagcat ccgtaccacc ggcttgcgcc atgtcaggac gtccaccacc
     1201 cttgccgccc acctgctgag cgaccatacc aatcagttcc cctgctttca cacgatctgt
     1261 gacgtcctta gatacgcctg caatcagaga aaccttacct tcggctaccg ttgccagcac
     1321 gataattgtc gaccccagct gattttttaa atcgtcaacc atggtacgca acattttcgg
     1381 ctcaacaccg ctaagctcgc taaccaacag cttaacacca ttaacatcaa ttgccttact
     1441 ggaaagattt gcgctctcct gtgcggcagc ttgttcttta agctgttgta gttctttttc
     1501 taactgacgc gtacgttcca gtactgagcg cactttatcc gccagattat tgctatcgcc
     1561 tttcagcaga tgcgcgactt cgcttaagcg atcgctgtct gcatgaacgg tggtgatagc
     1621 gccttctccg gttaccgctt cgatacgacg aacgcctgca gcagtacccg attcagagat
     1681 gatgcggaac agaccaatat caccagtgcg gctggcgtga gtaccgccac acagctcggt
     1741 ggagaaatcg cccatgctca gcacgcgtac acgctcatca tacttctcgc cgaacagcgc
     1801 catcgcacct ttcgctttcg ccgcttcgag atccatgatg ttggtttcga tcggcaaatt
     1861 gcgacgaatc tgtgcgttca ccaggtcttc gaccacacga atctcttccg gtttcatcgc
     1921 ttcgttgtgt gagaagtcga agcgcagcac cttgtcgtta accagtgaac ctttctgcga
     1981 tacatgagtc cccagaacct ggcgcagcgc agcgtgcatc aggtgcgttg cggagtgatt
     2041 cagacgaata cgggcgcgac gagcctcatc aacatcagcc tgcacagcgt cgcccacttt
     2101 cagagaaccc gcagcaagtt taccgatgtg accaatcgcc tggccgtatt tctgcgtatc
     2161 ttccaccgcg aaggagaagt tagcgccttt cagttcgcct ttatcaccaa cctgaccgcc
     2221 ggattccgca tagaatggtg tttgatctag cacgaccaca gcttcctggc ctgcattgat
     2281 ggcatcaacc gctttaccat caacaaacag cgcggtcact ttgccgttca gttccagatg
     2341 gtcatagcct ttaaattcag atgcactatc aacacggatc attgcgttgt aatcggcacc
     2401 aaagccgctg gcttcgcgcg cgcgacgacg ctgctcttcc attgctgctt caaaaccagc
     2461 ttcgtcaact ttgatgttgc gctcacgaca aacatcagcc gtcaggtcaa ccgggaagcc
     2521 ataggtgtcg tacagacgga aagccgtttc accatccagc gtatcaccag aaagttttgc
     2581 cagctcttca tccagcaacg ccagaccgcg ctccagagta cgggcaaact gctcttcttc
     2641 agtcttcagc acctgctcaa cctgcgcctg ctggcgtttc aggtcttcac ccgcagagcc
     2701 cataacgtcg atcagcggac caaccagttt gtagaagaag gtttctttcg cgccgagcat
     2761 attgccgtga cgcactgcgc gacgaatgat acgacgcagt acataaccac ggttttcatt
     2821 ggacggcatt acgccatccg cgatcaggaa cgcacaagaa cgaatgtggt cagcgattac
     2881 gcgcagcgat ttattgctca gatcggtcgc gccagtgact ttcgctaccg cctggatcaa
     2941 cgtgcggaac aggtcgatgt catagttaga gttaacgtgt tgcagcaccg cagcaatacg
     3001 ctccagaccc ataccggtat ctacagacgg cttcggcagc ggttccatcg tgccatctgc
     3061 ctggcggttg aactgcatga agacgatgtt ccagatctca atgtagcggt cgccgtcttc
     3121 ttccggactt cccggagggc caccccaaat gtggtcgccg tgatcgtaga agatttcggt
     3181 gcacgggccg cacggaccag tgtcacccat ctgccagaag ttgtcagatg cgtatggcgc
     3241 acctttgtta tcgccgatgc gaataatacg ttcgcgcggg atcccgactt ctttttccca
     3301 gatttcgtag gcttcgtcgt cgctttcata gacggtaacc cacagacgct ctttcggcag
     3361 ggcaaaccat ttttcgctgg tcagcagttc ccatgcaaac tgaatggcat cgtgtttgaa
     3421 atagtcgccg aagctgaagt tgcccagcat ttcgaagaag gtatggtgac gcgcggtgta
     3481 accgacgttt tccaggtcgt tgtgtttacc acccgcacgc acgcagcgtt gggaagtggt
     3541 agcgcgggaa taattacgct tgtcgagccc aaggaacaca tccttgaact gattcatccc
     3601 ggcgttggta aacaacaaag ttgggtcgtt atggggtacc agggagctgc tggcaactac
     3661 ctgatgtccc ttactatgga aaaagtcgag aaacgcctga cggatctcag cggtgctctt
     3721 gctcataatt atcctgaaat caagctaacg aaatatcgcc accagctcca gcgtgtctta
     3781 accgccgggc tggtaactga aaagtgggaa taagataagt tttcttgact gggaagtaaa
     3841 ataccgtatg cgttcagtcg gcaaaatttc gccaaatatc ctggatatct tccatcagat
     3901 agccacgata gagcagaaaa cgctggatct taactttttc tgaaaagaca gttggcaaag
     3961 gttcaccata ttttcgcgtc gcctgatcgc gcgccagtgc gcaccagtcg atgtcacatt
     4021 cacgcatcgc tttttctgtc gcttcgcggg aaataccttt ctgattcagt tcctgacgaa
     4081 tacgtgcagg tccataacct ttgcggctac ggctggcgat aaagcgcgca acaaatcggc
     4141 tgtcatcgag atagccatgt tcatggcacc aggcaataac gcgctcgtaa tcttctgccg
     4201 tagcatcaat ctcttctggg ccatttttgc ccataatcgg tgccgcgagt ttacgtcgca
     4261 gttcttgctc actgtgatcg cgcaccgcca gaatgtgtac cgcacgatcc aacaggcgag
     4321 catatgccgg gcgacgggac gttgattctg tcatggcata tccttacaac ttaaaaaagc
     4381 aaaagggccg cagatgcgac ccaggttttg ctgataaaca gatttaatag tcaatgagtg
     4441 tgcagaatgt tcccgcaggc ccaattcgtt agaggatcga ggtgagagta atttttcacg
     4501 ccagtgctgg cctgttcccc tcaccctaac cctctcccca aaggggcgag gggaccgtcc
     4561 gtgcacacat tatctattat catcaataac gaacgattaa aaatcttcgt tagtttctgc
     4621 tacgccttcg ctgtcatcta cagagaaatc cggcgttgag ttcgggttgc tcagcagcaa
     4681 ctcacgtact ttcttctcga tctctttcgc ggtttccggg ttatctttca gccaggcagt
     4741 tgcattcgct ttaccctgac cgatcttctc acctttgtag ctgtaccacg cgcctgcttt
     4801 ctcgatcagc ttctctttta cgcccaggtc aaccagttcg ccgtagaagt tgataccttc
     4861 gccgtagagg atctgaaatt cagcctgttt aaacggtgca gcgattttgt tcttcaccac
     4921 tttcacgcgg gtttcgctac ccaccacgtt ttcgccctct ttcaccgcgc cgatacgacg
     4981 gatgtcgaga cgaacagagg cgtagaattt cagcgcgtta ccaccggtag tggtttccgg
     5041 gttaccgaac atcacaccaa ttttcatacg gatctggttg atgaagatca gcagcgtgtt
     5101 ggactgcttc aggttacccg ccagcttacg catcgcctgg ctcatcatac gtgccgcaag
     5161 gcccatgtga gagtcgccga tttcgccttc gatttccgct ttcggcgtca gtgccgccac
     5221 ggagtcaacg acgataacgt ctactgcacc agaacgcgcc agggcgtcac agatttccag
     5281 tgcctgctcg ccggtgtccg gctgggagca cagcaggttg tcgatatcga cgcccagttt
     5341 acgtgcgtag attgggtcca gcgcgtgttc agcatcgata aacgcacagg ttttaccttc
     5401 acgctgcgct gcggcgatca cctgcagcgt cagcgtggtt ttaccggaag attccggtcc
     5461 gtagatttcg acgatacggc ccatcggcag accacctgcc ccaagcgcga tatccagtga
     5521 aagcgaaccg gtagagatgg tttccacatc catggaacgg tcttcaccca ggcgcatgat
     5581 ggagccttta ccaaattgtt tctcaatctg gcccagtgct gccgccaacg ctttctgttt
     5641 gttttcgtcg atagccattt ttactcctgt catgccgggt aataccggat agtcaatatg
     5701 ttctgttgaa gtaattatac tgtatgctca tacagtatca agtgttttgt agaaattgtt
     5761 gccacaaggt ctgcaatgca tacgcagtag cctgacgacg caccgcatca cggtcgccgc
     5821 tgaagcattc ccgccgggta atgccttcac cgcgggcagt ggcaaaagca aaccagacgg
     5881 tgccgacagg cttctcttca ctgccgccat ccggcccggc gataccacta atagacacgg
     5941 cataatcagc acgagccgct ttcagtgcgc ctatcaccat ttccaccacg acgggttcac
     6001 tcaccgcgcc atgctgcgcc agcgtctctt cgcgtacgcc gatcatctgc gctttggctt
     6061 cgttactgta ggtgacaaat ccgcgttcaa accaggcgga gctatcggca atatcggtaa
     6121 tcactttcgc tacccaacca ccggtacaag actcggcagt tgttacggtt gcgccacggg
     6181 ctttcagcgc ctgcccaacc tgttcactta actgcatcag ttcactgtca gtcatcacaa
     6241 cctctgtcag tcaaaaattt atgccggaca agatagcact ttcgtcagga agatggtgtt
     6301 ggcgttgcaa ttttacgagg aggattcaga aaaaagctga ttagccagag ggaagctcac
     6361 gcccccctct tgcaaatagt tactgcacgc gcgccagcgc cacggcttgt cctaactgcc
     6421 agaccgccat tgcgtaatgg gtgctgtggt tataacgggt aatggtgtag aagttcggca
     6481 gaccgtacca gtactggtaa ccggtaccga catccagacg cagcaggctg gcttgttgat
     6541 ggttgcccag cggctgctgt ggcgttaaac ctgccgtggc aagctgcgaa atgctgtacc
     6601 tggttttgaa gccatttggc aagcctggag cctgaccgtt tgccattacc gcgacctgat
     6661 cgcctttcac ccagccgtgc gctttgaaat agttcgccac gctaccgatc gcatcaaccg
     6721 gatcccacag gttgatatgc ccgtcgccgc tgaaatctac cgcatattgt ttgtaagacg
     6781 acggcataaa ctgtccgtag cccatcgccc cggcaaagga acctttcaga ttgagcggat
     6841 cgtcctgctc gtcgcgcgcc atcagcagga aggtttccag ctcgccagag aaatactccg
     6901 cgcggcgtgg gtagttaaat gacagcgttg ccagcgcatc gaggatgcga gttttcccca
     6961 tcacgcgccc ccagcgggtt tcaacgccga taatcccgac gataatttcc ggcggtacgc
     7021 catacacctg ccacgcgcga ttcaacgcat cttcatactg attccagaaa accacaccgt
     7081 tctgcacgtt gtccggcgta ataaattttt tgcgataacg cagccatgcg ccgttcggac
     7141 ctgatggcgg tttcaccgat gtggttggtg cctggttatc catcagccgc agtaccgaat
     7201 ccagacgctt cgcctgggag agaatttcct gcaactgctg acgatcgaaa ccgtgtttgt
     7261 tcaccatttt gtcgatgaac tgctgggcat tcgggttatt agcgaaatcg ccgcccatct
     7321 gcatcacatt gtgctgcggc tcaagcagga agccgccaga cggcgttccg gtggtcgttt
     7381 cagtctcagt aggttttggc ttgctgctac aggcggcaag caacacaaaa aggggaagca
     7441 atgttacata acgacgcttg aacatgaggg ggccatttaa cagattcaac caggggcaag
     7501 tatggtaaag catcacgccc cgcacaagga agcggtagtc actgcccgat acggacttta
     7561 cataactcaa ctcattcccc tcgctatcct tttactcaaa ctttcaaatt aaaatattta
     7621 tctttcatct ttagatcaaa ataacacttt taaatctttc aatctgatta gattaggttg
     7681 ccgtttggta ataaaacaat aaatcctgaa ggagagaaca atgatagaaa ccattactca
     7741 tggtgcagag tggtttatcg ggctgttcca aaagggcgga gaggtgttta ccgggatggt
     7801 gaccggcatt cttccgctgt tgattagcct gctggttatc atgaacgcac tgattaattt
     7861 tatcggtcag catcgtattg aacgttttgc tcaacgttgc gccggtaacc ctgtttcccg
     7921 ttacctgctg ctaccgtgca ttggcacgtt tgtcttttgc aatccgatga ccttaagcct
     7981 gggtcgcttt atgccggaaa agtacaaacc cagctactac gcggcggcct cttatagctg
     8041 ccactcaatg aatggcctct ttccccatat caaccctggc gaactgtttg tttatcttgg
     8101 cattgccagc ggtctgacaa cgctgaacct gccacttggc ccactggcgg tgagctatct
     8161 gctggttggt ctggtcacca acttctttcg cggctgggtg accgatctga ccaccgccat
     8221 ttttgagaaa aagatgggca ttcaacttga acaaaaagtt cacctggcag gagcaacatc
     8281 atgacgtgta ttcggatcga aaaaggaacg ggtggctggg gcggcccgct tgagctggaa
     8341 gccacgccgg gcaaaaaaat cgtctatatc accgccggta cccggcctgc gattgttgac
     8401 aaactggcac aacttactgg ctggcaggct attgacggat ttaaagaagg tgaacccgcg
     8461 gaggcggaaa ttggtgtcgc ggtaatcgac tgtggcggca cattacgctg cggcatctat
     8521 ccgaaacgac gtattcccac cattaatatc cactcgacgg gcaagtccgg tccgctggcg
     8581 cagtacattg tggaagatat ttatgtctct ggcgtaaaag aagaaaacat cactgtagtg
     8641 ggtgatgcga caccacaacc ctcttccgtg ggacgtgact atgacaccag taagaaaatc
     8701 accgaacaaa gcgatggttt actggcgaag gtgggaatgg gcatggggtc cgccgttgcg
     8761 gtgctgtttc aatctggtcg tgacaccatc gacactgtat taaaaaccat tctgccgttt
     8821 atggcattcg tctcggcgct cattggcatc attatggctt ctggccttgg tgactggatt
     8881 gcccacggtc ttgctccgct ggcgagccat ccactgggtc tggtcatgct ggcgctcatc
     8941 tgctccttcc cactgctttc acctttcctc ggcccaggcg cagttatcgc acaggttatc
     9001 ggcgtattga ttggcgtgca gattggtctc ggcaatattc cgccgcatct ggctttaccg
     9061 gcactgtttg ccatcaacgc gcaggcggcc tgcgacttca tcccggtcgg tttgtcgctg
     9121 gcggaagccc gtcaggacac ggttcgcgtc ggtgtccctt ctgtactggt gagccgcttt
     9181 ttaaccggcg caccgactgt actgatcgcc tggtttgtct ccggttttat ctatcaatag
     9241 aggctgaaac atgaccgtta tttataagac caccatcacc cgtatcggcg cgagtgccac
     9301 tgacgccctc agcgaccaga tgctcatcac ctttcgtgaa ggcgcgccag cggacctcga
     9361 agagtattgc ttcattcatt gccacggcga gttgaaaggt gcactccatc ccggtttgca
     9421 atttacgctc gggcagcatc gctatccggt gaccgctgtt ggcagtgtgg cggaagacaa
     9481 ccttcgcgaa ctgggtcatg tcaccctgcg cttcgatggt ttaaacgaag cggaatttcc
     9541 gggcactgtc catgtggcag gccctgtacc cgacgatatc gcgccgggat cggttttgaa
     9601 gtttgaatct gttaaggagt aaaaaatgaa tcaggttgcc gttgtcatcg gtggtgggca
     9661 aaccttaggc gcgttcctgt gccacggtct ggttgccgag gggtatcgcg tcgcggttgt
     9721 cgatattcag agcgacaaag ccgcaaatgt ggcacaagaa attaacgccg aatatggtga
     9781 aagtatggcg tacggttttg gtgctgacgc cactagcgag caaagcgttc tggcgctctc
     9841 tcgtggggta gatgaaatct ttggtcgcgt ggatttgctg gtctatagcg ccggaatagc
     9901 aaaagcagcc tttatcagcg acttccagct cggcgatttt gaccgttcgc tacaagtgaa
     9961 tctggtgggt tatttcctgt gtgcccgtga attttcgcgt ttgatgatcc gcgacgggat
    10021 tcagggtcgc attattcaga tcaactcgaa atccggcaaa gtgggcagca aacacaactc
    10081 tggctacagc gcagcgaaat ttggtggcgt cgggctgact caatcactgg cgctggatct
    10141 ggcggagtac ggcattacgg tgcattcact gatgctcggt aacctgctga aatcgccgat
    10201 gttccagtca ctgttgccac aatacgcgac caagctgggt atcaaaccgg atcaagtcga
    10261 gcagtattac atcgacaaag taccgctcaa acgcggctgc gattatcaag atgtgctgaa
    10321 tatgctgctg ttctacgcca gtcctaaggc gtcgtactgc accggacagt cgatcaatgt
    10381 caccggcggt caggtgatgt tctgatcaac agcggagatc cattaaggat ctccgtgaga
    10441 ctatagaatg cctgatgcgc tacgctcatc aggcatacag gacttccgcc actacattaa
    10501 gggaaagtta tggtatccgc actcatcacc gtcgccgtta tcgcctggtg tgcgcaactg
    10561 gccttaggcg gctggcaaat ttctcgtttt aaccgtgcct tcgacacact atgccagcaa
    10621 gggcgggttg gcgtgggccg ttccagcggg cgctttaaac cgcgggtcgt ggtcgccatc
    10681 gcgctggacg atcagcagcg catcgtcgac accttgttta tgaaaggact gaccgtcttc
    10741 gcccgaccgc aaaaaattcc cgcaattacc ggtatgcatg cgggtgattt acagcccgat
    10801 gtgatctttc cccatgatcc actatcacag aatgctctat cattggcgct taaactgaaa
    10861 cgtggataat ttcgttgtga atgttacttg cttgcgaagt tatcattttg aaacctaaat
    10921 caggtaatca cgcccatgaa acctcgtcag cgtcaggccg ccattctgga gtatctgcaa
    10981 aagcagggta aatgctcggt tgaagaattg gcgcaatact ttgacaccac aggcacaacc
    11041 attcgcaaag atctggtcat tctggaacat gccggaaccg tcattcgtac ttatggcgga
    11101 gtggtgttga ataaagagga atccgatccg cctatcgatc ataaaacact catcaacacc
    11161 cacaagaaag agctgattgc agaagctgcc gttagtttta tccatgatgg cgattcgatc
    11221 attcttgatg ctggcagtac cgttttgcag atggttcccc tgctctcgcg ctttaataac
    11281 atcacggtga tgaccaacag cctgcatatc gtcaatgcgc tatccgaact ggataacgaa
    11341 caaactatcc tgatgccagg cggaacgttt cgtaaaaaat cggcctcatt tcacggacag
    11401 ctggcagaga atgccttcga acatttcagt ttcgataaat tgtttatggg caccgacggc
    11461 atcgatctca atgcgggcgt aaccaccttc aacgaggttt ataccgtcag taaggcaatg
    11521 tgcaatgccg cgcgcgaagt gattttgatg gcggactcat caaagtttgg ccgtaaaagc
    11581 cccaacgtag tttgcagtct tgaaagcgtc gataagctga ttaccgacgc aggtatcgat
    11641 ccggcgtttc gtcaggcgct ggaagagaaa gggatcgatg tgatcataac cggagagagc
    11701 aatgagtgaa gcactactga acgcgggacg tcagacgtta atgctggagt tgcaggaagc
    11761 aagccgttta ccggaacgtc tgggcgatga ttttgttcgc gccgccaata tcatcctgca
    11821 ctgcgaaggc aaagtggtgg tttcgggaat tggcaaatcg ggccacattg gtaagaaaat
    11881 cgccgcaaca cttgccagta ccggcacacc ggcttttttg tccatccggc agaagcactg
    11941 cacggcgatc tggggatgat tgaaagccgc gatgtgatgc tgtttatctc ttactccggt
    12001 ggcgcgaagg aactggatct gattattccg cgtctggaag ataaatctat cgcgctgctg
    12061 gcgatgaccg gcaaaccgac gtcaccgctg ggcctggcgg caaaagcggt gctggatatc
    12121 tccgtagaac gcgaagcctg cccgatgcac cttgcgccga cctccagcac cgtcaatacc
    12181 ctgatgatgg gtgacgcgct ggcgatggcg gtcatgcagg cgcgcggatt taatgaagaa
    12241 gattttgccc gctcccaccc agccggggca cagggcgctc gcttgctgaa taaagtgcat
    12301 catctgatgc gccgtgacga tgccatccca caggtggcgt taaccgccag cgtgatggat
    12361 gcgatgctgg aactcagccg caccggtctg gggctggtgg cggtatgtga cgctcaacaa
    12421 caggtacaag gcgtctttac cgacggcgat ttacgtcgct ggctggtagg cggcggcgca
    12481 ctcaccacgc cagttaatga agcgatgacg acaggcggca ccacgttaca ggcgcaaagt
    12541 cgcgccatcg acgccaaaga gatcctgatg aagcgcaaaa tcactgccgc accggtggtg
    12601 gatgaaaacg gcaaactcac cggcgcaatt aacctgcagg atttctatca ggccgggatt
    12661 atttaatcct tcattcccag acgtttcgcc agccgatgca ggttggcgac gtcggtttcc
    12721 agcatccgcg cgcaggcagc ccagttatga tgattttgtg ccagtgcctg gcgaatagtt
    12781 tcacgctgga acgcttctgt cgcttcacgc aggttttgct taacaacggg caccgccgcc
    12841 gcttctggcg gcggcaacgt cacctcagga aaagcaaaat gttgcgcctc aagaatcact
    12901 tcatcgccgt tgcgggtggc tctcgccagc actaccgccc gatgaatagc atgttccagt
    12961 tcgcgcacgt tccccggaaa acgatagtgt tgcagtaaat ttcgcgctcc ggcacttaat
    13021 accacgcggg agagccccag ccgcaaacga cactgttcgc agaaataccc cgccagcaga
    13081 atgacatcat cgccccgctc acgcagcggc ggcaccgaaa gtggaaacac gctcaggcga
    13141 tgaaacaagt cagcgcgaaa tcgccctgcc agcacctctt cgcgtaagtc gcggttagtc
    13201 gccgccagca cgcgcacatc gacccgcaaa ctacggtcat cgccaacgcg ctgaatatcg
    13261 ccatactgca acaccctcag cagcttggcc tgcaatgcca acgacaactc gccgatctca
    13321 tccagaaaca gagtgccgtt atccgccatt tcaaacttcc cgctgcggtt actgatagcg
    13381 ccagtaaacg ctcctttcac atgcccgaac aactcacttt ccgccacact ttccggcagt
    13441 gcagcacagt tgagatagac cagcggattc accgcccgtg gcgaggcttc atgaatcgct
    13501 ttcgccacca gctccttacc ggttcccgtc tcaccgctga tcaggacgtt gagatcggac
    13561 gccgccacaa tctcaatctc ttttttcagt tgcgtcatgc caggggacaa gccaatcatc
    13621 tgcgtctgtt tcaccgcttc aaacggcgtg gcatcgcctg gcatcatatt ctggctttcc
    13681 agttgttcaa tcagcaacgc attgcttaac gttcccgccg ccagcgcagc aatcagccgt
    13741 agctcttcgt cgctgaaaac atcgaactga tcgggctgca tcccgtcgag cgtcagtgcg
    13801 ccgatcaggt tttgcccggc aaacaatggc agaccaacgc aggcgtgaac cttcagactc
    13861 tcctgcccag gaatcaaacc gtcataggga tcgggcaatt cgctgtctgc gggaaagcgc
    13921 accacatccc cggcgcgggc aatcgcttcc agccgtggat gcccttccag cgcaaagcgt
    13981 ctaccgagta caccctttgc cagaccgtcg atggcaagcg gaataaactg ccgcgaatcg
    14041 taacgtagca acgcagacgc atcgcactcc agcacctgac gtagcgtggt gatcaggcgc
    14101 tgaaaacgat cctgatgacc aatcccacgc tgcaattcga tggcgatatt cgccagcaca
    14161 tcaacggaaa aactcatctt tgcctcactg tcaatttgac tatagatatt gtcatatcga
    14221 ccatttgatt gatagtcatt ttgactactc attaatgagc ataattttat ttatatagta
    14281 aaaacaatca gataaaaact ggcacgtaat ctgcaattag caagacatct ttttagaaca
    14341 cgctgaataa attgaggttg ctatgtctat tgtggtgaaa aataacattc attggggtgg
    14401 tcaacgtgac tgggaagtgc gtgattttca cggtacggaa tataaaacgc tgcgcggcag
    14461 cagttacaac agctacctca tccgcgaaga aaaaaacgtg ctgatcgaca ccgtcgacca
    14521 taaattcagc cgcgaatttg tgcagaacct gcgtaatgaa atcgatctgg cggatatcga
    14581 ttacatcgtg attaaccatg cagaagagga ccacgctggg gcgctgaccg aactgatggc
    14641 gcaaattccc gatacgccga tttactgtac tgccaacgct atcgactcga taaatggtca
    14701 tcaccatcat ccggagtgga attttaatgt ggtgaaaact ggtgacacgc tggatatcgg
    14761 caacggcaaa cagctcattt ttgtcgaaac gccaatgctg cactggccgg acagcatgat
    14821 gacttacctg acaggcgacg cggtgctgtt cagtaacgat gctttcggtc agcactactg
    14881 cgacgagcat ctgttcaacg atgaagtgga tcagacggag cttttcgagc agtgccagcg
    14941 ttactacgcc aatatcctga cgccgttcag ccgcctggta acaccgaaaa ttaccgagat
    15001 cctgggcttt aacttaccag tcgatatgat agcgacctct cacggcgtgg tatggcgcga
    15061 taacccgacg caaattgtcg agctgtacct gaaatgggcg gctgattatc aggaagacag
    15121 aatcaccatt ttctacgaca ccatgtcgaa taacacccgc atgatggctg acgctatcgc
    15181 ccaggggatt gcggaaaccg acccacgcgt ggcggtgaaa attttcaacg tcgcccgaag
    15241 cgataaaaac gaaatcctga ccaatgtctt ccgctcaaaa ggcgtgctgg tcggcacttc
    15301 gacgatgaat aacgtgatga tgccgaaaat cgccgggctg gtggaggaga tgactggttt
    15361 acgcttccgt aacaaacgcg ccagtgcttt cggctctcac ggctggagcg gcggtgcggt
    15421 ggatcgtctt tccacgcgcc tgcaggatgc gggtttcgaa atgtcgctta gcctgaaagc
    15481 gaaatggcga ccagaccagg acgctctgga gttatgccgt gaacacggtc gcgaaatcgc
    15541 ccgtcagtgg gcgctcgagc cgctgccgca gagcacggtg aataaggtag tcaaagaaga
    15601 aacctctgcc accacgacgg ctgacctcgg cccacggatg cagtgcagcg tctgccagtg
    15661 gatttacgat ccggcaaaag gcgagccaat gcaggacgtt gcgccaggaa cgccgtggag
    15721 tgaagtcccg gataacttcc tctgcccgga atgctccctc ggcaaagacg tctttgaaga
    15781 actggcatcg gaggcaaaat gagtaacggc attgtgatca tcggttcggg cttcgccgcc
    15841 cgccaactgg tgaaaaatat tcgcaaacag gacgccacta ttccattaac cctgattgcc
    15901 gccgacagca tggatgagta caacaaacct gacctcagcc atgttatcag tcaggggcaa
    15961 cgtgccgatg accttacccg ccagacggcg ggtgaatttg ccgagcagtt taatctgcac
    16021 ctgtttccac aaaccagggt gacggatatc gatgccgaag cccgtgtggt gaaaagccag
    16081 aataatcagt ggcaatacga caagctagta ctggcaaccg gtgccagtgc ctttgtcccg
    16141 cctgtgcctg ggcgtgagtt aatgctgacg ttaaatagtc agcaagagta tcgcgcctgt
    16201 gaaacgcaac tgcgggatgc ccgacgcgtg ttgattgttg gcggtggttt gattggtagc
    16261 gaactggcga tggatttttg tcgtgcaggc aaagcggtca cgctaatcga caacgctgcc
    16321 agtattctgg cgtcgttaat gccaccggaa gtaagcagcc gcttgcagca tcggttgacg
    16381 gaaatgggcg ttcatctgct gttgaaatct cagttacagg ggctggaaaa aacggattct
    16441 ggcattctgg caacgctgga ccaccagcgt agtatcgaag tggatgcggt aattgccgcc
    16501 accggactgc gcccggaaac agccctggca cgacgcgccg ggctgacgat taatcgcggc
    16561 gtttgcgtcg atagttatct gcaaaccagt aatgacgata tttatgcgct gggcgattac
    16621 gcggaaatca acggtcaggt actgccattc ctgcagccga ttcaacttag cgcgatggtg
    16681 ctggcaaaaa atcttctcgg caataacacg ccgctgaaac taccgacgat gctggtgaaa
    16741 atcaaaacgc cggaattacc gctgcatctg gcaggcgaaa cccagcgtca ggatttacgc
    16801 tggcaaatta ataccgaacg ccagggaatg gtggctcgcg gtgttgacga tgctgaccag
    16861 cttcgcgcct ttgtggtcag tgaagatcgg atgaaagagg catttggatt gttgaaaaca
    16921 ttgccgatgt aggtgggcta ctgtgcctaa aatgtcggat gcgacgctag cgcgtcttat
    16981 ccgacctacg gggacgcatg tgtaggccgg atcaggcgtt tacgccgcat ccggcaatgg
    17041 tgtccaaatg caacacgttt tatccgttct ggacttcacc cgctaaccaa cgcgccgcag
    17101 caataacccc ctgccccaga gacaaaccgc catcacccgc cggtaaactc tgaggaaaga
    17161 gcaatgtgaa atcagcgaga taatgcgaca gacgagcacg cagcaaacgg ttatgaataa
    17221 ccccgccgct aaataccagc gtagtgatac cacgcatcgt ggcctgctca cgcatcaacg
    17281 cggcaaaacc ctgcgccagc gcatcatgaa acgcccacgc gcgttgatta acctgtgcct
    17341 gccagttcag ccactgctgc cagaaagcgg cgagatccag ttgattgtcc accagcggca
    17401 tcgtcaccgg atgcgtcact ccgtggcatg aggctgcgag cgcctccaga gcacaagccg
    17461 cttcaccttc ataacttaac gtggctggcg cacagcccag tgccgccgcc actgcatcga
    17521 acaaccgccc acacgatgac gccagcggcg cgttaattcc acgctcaatg gcccgcgcca
    17581 gcacgctcca gttttgctgt tgcacacttg ctgtttcagg gtaattctgc cactccggca
    17641 caaagcgcag gcactgcgcc agcaggtttc gccacggctg cttcgctgcc aaatcgccac
    17701 ccggaagcgc cactgcaggc aagccgccca ggtgctcaca ttcgcgatag ttcacccgca
    17761 ggcactcgcc gccccacaaa gcgccgttct tccccatacc gataccgtcg agcgtcaaag
    17821 caatgacatc accgccatcc agcggccact gatgctctgc cagacacgcc gctgcatggg
    17881 catgatgatg cagtaccgtt tgcgtcggca gattcatttc acgcgcccac tggctggaga
    17941 catagcccgg atgcgcgtca tgcacaacgt atttcggggt aaaatcgtag atgttttgca
    18001 tcaggcgtaa cgcttcgcgc cactgcatct ggatgccatc gtcacttaaa tcgcccagat
    18061 gctgactcaa caccgcttgt tcaccgcgca ccaggcagaa ggtatttttc agatccgctc
    18121 cgagacacag cacaggcgga acatttttaa agctcggagg caaagccagc gcatccggca
    18181 catacccccg cgaacggcgc agcatttcgc cgctttcgcg caccaccgaa tcatccatcc
    18241 gctgcacgat gtcgcggtta tgtatcaaga atccgtcggc aatgccctgc aaatccgcca
    18301 gcgcctgttc gttgctgata gctggtggtt taccgctcag gttgccggag gtcatcacca
    18361 gcgggcattg cagttcctgt aacagcaaat gctggagcgg gttcgcaggc aacattaccc
    18421 cgacttcgtt aaggtcaggg gcgatatcat cacaaagctc aggaacgtat tttttatcca
    18481 ccagcacaat cggcgcggcg ggcgtggtaa gcaactggcg cgcagcgtct ggtaaaccgt
    18541 cagccactgg caacatgacc gccagcggtt tcgccgggcg atgtttgcgc gcccgaagtg
    18601 tcgccaccgc gttactgtta cgtgcatcgc aggcaagatg aaatccgcca atccctttga
    18661 tggcgacaat gttgcccatt tttaactgtg cgatagccgc ctgtaatgcc gcctcttgtt
    18721 ctgcatgttc accatgactt acccattcaa gatgcgggcc acactctggg caggccaccg
    18781 gctgggcgtg gaagcgacga tcgagcgggt cgcggtactc tttgtcacaa gccggacaca
    18841 acggaaacgc cgccatcacg gtaaacgggc ggtcgtaagg catggcgcga ataatggtga
    18901 aacgcgggcc gcagtgggta cagttgataa acggataacg ataacgccgt tcgcctgggg
    18961 tattcatttc ggcaaggcaa gcagggcaag tagcggcatc cgggacaatt tgcgtattca
    19021 tggcacctcc cgcgctctgg cggatggtga actcagtggg cagttgtgac cagatgtacg
    19081 gctcacgctc gacgctatca atacgcgcca gcggcgggca gtgctgatgc aattgaacaa
    19141 gaaacgtttc cgggtcttcc cgcagccgga cttctacgcc atcgccgtca ttacagacat
    19201 cgccgtgaag atttaattgc tgtgccagct gccagacaaa cggacgaaaa ccgacgccct
    19261 gcactttgcc acgaatacgc agttggacac cgcaagatgt gttttttgcc attgagttat
    19321 tcccgccatc atgaattgcg taacccgccc agccggacac gacagcgtcg catccggcag
    19381 tcacaggtcg gcgataccgc ccgctccgta ttctacgaat atttccggga attcctttga
    19441 tgccagaaca gttctgtaag atttttagaa catcagcgcc gtacggcggc gtttttctgc
    19501 actcagttgt tcaagtttat tacgatcgac acaaatcagc gcatgagtcg ggcaagccgc
    19561 catacacgcc gggccgtctt cacgatggtt gcacaggtca catttattgg cttcggcttt
    19621 gtcagcccgt acattcagcc ccgcgccgct gttgcgaatc accggacgta ccaccacttc
    19681 catcgcgcca tacgggcaag ccacaacgca ggttttgcaa ccaatgcaac gttcctgcat
    19741 cacatgaaca aaccctttat cacggctgat agcaccattc gggcagacgt tagcgcacgg
    19801 tgcatcttca cactgacggc aaactgtcgc cgtggaaatg ttcacacctt taatgacatg
    19861 gatacgcggt aaaaatgttt ccggggtcag cgatgcacag tcctgatttt cctgatgaga
    19921 aaccacgcac gccacttcac aggtacggca accaatacat ttactcgcgt cagcaatgat
    19981 gaaacggttc atcaaattct ccagcaatga cagttaatgc gccgatacat tcacaaatca
    20041 tgccagtttt taattcactg ttatttaagg aaattaattt ctgtaatgca ggaaaaaaga
    20101 tgtcatcgac actagtgacg atgacatgtg atgacaatgt ttatcgcgaa agagcaatga
    20161 gtgagtcgcg gtggatcagt tttccgctga aggttttcgg cggtgagaaa tccccgccat
    20221 cgagcataaa aatcagccgt ccaataattt cctgaatcat ctcagtcacc ggaattttta
    20281 cgctggagag cgccggaacg atataggggg caattgcgat atcatcgaat ccgataactg
    20341 acacctgctc tggcaccgct acgccgcgct cgtgcaacgc tttcatcgca cctatcgcca
    20401 tatcgtcgtt actggcaact aacgcgctaa atttagcccc acgttcgagc aacgtttcta
    20461 ccccttcggc cccgctggcg ggcgtccatt taccgttagc gataagtttt tcattgagcg
    20521 caataccatg ctgcgccagc gcgtctttat acccagcaag acgttcaatg ctggtggggg
    20581 aatccatcga gccggtaagg aaagcaatct cctgatgtcc ggcgtttatc aactctgcca
    20641 cggcattaaa gctggtctgt ttatgatcgc accagacgct atggctgctg tttttgcgca
    20701 ggcggcgatt aagcaccatt atcggctgac tgtgcgcgtc aatgatgtca tcgatctcat
    20761 ccacgcttaa aaaacgcggg taaatcataa tggcgtcgca gcgcaaatcc agcagatact
    20821 gaatcgcctg gcgctcttct tcggcgctgt gtttaccatc tgccaatagc aactgccgcc
    20881 ctttctcttc cgccattcgc gcggcatgaa agagtaattc actaaaataa atgccgtggt
    20941 aaagcgtgtt ggtcactacc agccccagcg tctgagtact cttcgccgac agattgcgcg
    21001 ccagcaagtt tgggcggtaa ccgctctctt ctaccgcctg aaacacgcga tctttagtct
    21061 cctggctgac gtagccatta cctgaaagca cgcgggaaac ggtcgctttt gaaaccccgg
    21121 cgcgcttcgc cacttccagc atcgtcgtca tcattttcat ccctttacac gcaatcaacg
    21181 cagtgtactg caccgtttgc cgattgtcct tgcgcaatcg gcgggaaaaa tattcaggtg
    21241 accggtttca caaatataaa aaatgaataa ttaactctct tgcttattta gtgacaagta
    21301 ttcatgattt tgtgaaaccg gtttcctaat tccgtttcag catcggcatt tttccgttac
    21361 gtcgactgat aacaactaca tctaccctac tgataacagg ataaaatccg atggccaaaa
    21421 attatgcggc gctggcacgc tcggtgatag cggcactggg cggcgttgat aacatctcgg
    21481 cggtcacgca ctgtatgacg cgtttgcgct ttgttatcaa agatgaccag cttatcgaca
    21541 gcccgacgtt aaaaaccatc cccggcgtgc tcggcgtggt acgtagtgac aaccagtgtc
    21601 aggtgattat cggcaatacc gtttcacaag cctttcagga agtcgtcagc ctgctgccgg
    21661 gagatatgca gcccgcacag cccgtgggta aacccaaact cacgctgcgt cgcattggtg
    21721 cggggatcct cgatgcgctg atcggcacca tgtcaccgct gatcccggcg attatcggcg
    21781 gatcgatggt caaactgctg gcgatgatcc tcgagatgag cggcgtgctg acaaaaggat
    21841 cgccgacctt aaccattctg aatgtgattg gtgacggtgc tttcttcttc ctgccgctga
    21901 tggtcgcggc atctgccgcc atcaaattta aaaccaatat gtcgctggcg attgccatcg
    21961 cgggtgtgct ggtacatccg agttttattg aactgatggc gaaagcggcc cagggtgaac
    22021 atgtcgaatt tgccctgatt ccggtcaccg cggtgaaata cacctacaca gcgatcccgg
    22081 cgctggtgat gacttggtgc ctgtcatata tcgaacgctg ggtggatcgc attacaccgg
    22141 cggtgaccaa aaacttcctc aagccaatgc tgattgtgtt gattgccgca ccgctggcaa
    22201 tcctgctgat tggcccgatt ggtatctgga tcggtagcgc catttcggcg ctggtttaca
    22261 ccattcatgg ttatctgggc tggctttcag tcgccattat gggcgcgctg tggcctctgc
    22321 tggtaatgac cgggatgcac cgcgtcttta cgccaaccat cattcagacc attgccgaaa
    22381 ccggcaaaga agggatggtc atgccgtcag agatcggcgc taacctgtcg ctgggcggtt
    22441 catcactggc ggtggcgtgg aaaacgaaaa aaccggaact gcgccagacg gcgctggctg
    22501 cggcggcatc agccattatg gcggggattt ccgaaccggc gttatacggc gtggcgatcc
    22561 gcctgaaacg tccgcttatc gccagtctta tcagcggttt tatttgcggc gcggttgccg
    22621 gtatggcggg gcttgccagc cactcaatgg cagcgccggg gctatttacc agcgtgcaat
    22681 tcttcgatcc ggcgaatcca atgagcatcg tctgggtgtt cgcggtcatg gcgctggcgg
    22741 tggtgctgtc gtttatcctc acactgttgc tcggctttga ggatattcct gttgaggaag
    22801 cggctgccta ggcgcgaaag catcagagcg tacaaccgac cgtcgccaaa gaagtaagtc
    22861 ttaattgagg atgaaaatgt cagtatttcc agaaggtttt ttatggggcg gcgcgcttgc
    22921 cgccaaccaa tctgaaggtg cgttccgtga aggcggaaaa gggctgacca ccgtcgatat
    22981 gatcccacac ggcgagcatc gaatggcggt gaaactgggg ctggaaaaac gttttcagtt
    23041 gcgcgatgac gagttttatc ccagccatga ggcgacggat ttttatcatc gttataaaga
    23101 agatatcgcc ctgatggcag agatgggatt caaggttttc cgtacctcaa ttgcctggag
    23161 ccgtctcttt ccgcagggcg atgaaatcac gcccaatcag cagggcattg ctttttatcg
    23221 ttctgtcttt gaagagtgta aaaagtacgg tatcgaaccg ctggtcacgt tgtgccactt
    23281 cgatgtgccg atgcatctgg tcaccgaata tggctcctgg cgtaaccgca agctggtgga
    23341 gtttttcagc cgctacgcca gaacctgctt tgaagcattt gatggtctgg tgaaatactg
    23401 gctaaccttc aatgaaatca acattatgtt gcatagcccg ttctccggcg cgggtctggt
    23461 gtttgaagaa ggtgaaaatc aggatcaggt gaaatatcag gccgcgcatc accagctggt
    23521 tgccagtgcg ctagccgcca aaatcgccca tgaggttaac ccgcaaaatc aggtgggctg
    23581 tatgctggcg ggcggcaact tctaccctta cagctgcaaa ccggaagatg tctgggcggc
    23641 gctggagaaa gatcgggaaa acctgttttt tatcgatgtg caggcgcgcg gcgcgtatcc
    23701 ggcttactct gcccgcgtat ttcgcgaaaa aggggtaacc atagataaag cgctgggcga
    23761 tgatgagatc ctgaaaaaca ccgtcgattt tgtctctttc agctattacg cctcgcgctg
    23821 cgcctcggcg gagatgaacg ccaacaacag cagtgcggcg aacgtggtga aatcgctgcg
    23881 taacccgtat ctgcaagtga gcgactgggg ctggggaatt gatccactcg gtctgcgtat
    23941 caccatgaat atgatgtacg atcgttatca gaagccgctg tttctggtgg aaaacggcct
    24001 cggcgcaaaa gatgaacttg ctgccaatgg cgagattaac gatgactatc gcatcagcta
    24061 tttacgcgaa catatccgcg caatgggcga agcgattgca gatggcattc cgctgatggg
    24121 ctacaccaca tggggctgta ttgatttagt ttccgcctct acgggtgaaa tgagcaaacg
    24181 ctacggtttt gtctacgtag accgtgacga cgcaggcaac ggcacgctga cgcgcacacg
    24241 taagaaatcg ttctggtggt ataaaaaagt gattgccagt aatggggaag atttagagta
    24301 agtaacagtg ccggatgcgg cgtgaacgcc ttatccggcc tacatgtcgc acgaaccagg
    24361 aaggcccgat aagcgcagcg catcgggcaa tttagcattt ggcatcagag ctggttcacc
    24421 ccatcaagaa catccctgtc ctgattcctt aatgaaaaac tactcttctt ccaccgctaa
    24481 ctgcgcgaag ccgccattcc cttcccagcc ttccagtcgt tgataaacgg tttctaccgc
    24541 atctttaatc ggctgggtca tcgggtagta aaagccgacg atatccggct gtatgccgag
    24601 gaaaatcact tcgccaatat cttctttcaa ctggtcgata agatagttca gaggcatgtt
    24661 atgggtagtc atcataaaca tctcggcgat atcatccggg tcgatgatgc ggatctcgcc
    24721 ggggtttagc cccatatccg tggcgtcgac aatcagtaac cgcgtagggc gcagttcacg
    24781 gatggcgacg atgtcgtttt ccggtgcact accgccgtca atcaccaccc agttaccttt
    24841 cggcgcggcg gcgcactttt ccgccagcag cggacctgcg ccatcatcgc ccatcatgct
    24901 attgccaaca cagagtaaaa cgtcagtcac gcaatctcct caccatcaaa tagatggcgt
    24961 tttcctgatg aatatcatgc agcatactta acagcattgt actccattcc tgctgctgcg
    25021 aagtttgcgc tgcccgggct ttatcgaatg cgttggccag catcggcaca tggttaatgt
    25081 cgatgacgat ctcaccgtac ttcggtacgc cttccatttt gcggcgggct tcactgcccg
    25141 cctccagagt ggcaatccat gccagatatt catcccacgg gcaggtgagc gccgcttcca
    25201 ggcaatcgat aaccccaagg tggtgaccaa tcgccaggct gtaatagacc acctgctgcg
    25261 cctcggcggg cgtggcatcg ttctcatcaa taaatttacg gctcagttga ctgaacacca
    25321 ccttttcact catcggatac gcacctcttc tacaacatga ttcagatggc tgacaatctc
    25381 gttcagacgc ggatcgtttt ccgcttccag ccagcgtgca acctgttctt cgccctgccc
    25441 taactgtgtc aggaagtcat cggcaatctg acgaccgtaa cgataacccg ccaggcggcg
    25501 tgcttcgcga tccactttca cgcgcagcgg ctgcaccata tcgccatgca ggatctccgc
    25561 cggttgttca tccagttcac ccggcccacg ggcgtgaatt ttctgctcca gcaggccgag
    25621 cgccattgca aagccgtaca gcgtggcggc aggcgttggc gggcagccag ggatataaac
    25681 atccacaggg acaattttat ccgtaccgcc ccacacgcag cgcaggggat cgcattgcac
    25741 gggtgaccgc gccggtaaac agtaaaatat ccgcatgacg cggtgaagga acgactttaa
    25801 tgccgaagcg ttctgcatca aacagcggcg ataaagtggc gaaaatttcg atttcgcagc
    25861 cgttgcagcc gccgcagtcc acgcggtaaa cataggcaga acgtttgatt tttttcagta
    25921 acgacgcctt catgctggcg atggattcat ccaccgtcat cgggaccgga atgccgttgg
    25981 cgtcacgggg gcctaataaa ttgctcatca gatggcctct ttcatatggc gagtcagttc
    26041 aatacggtcg gacggcacct ggcatttctg gcgcttacat tccgggcaag tctcaaagct
    26101 ttcgcggtgg ttttccgcgc ggctgtcgcc gttgtgctta agcagcgcaa tggcgtagtc
    26161 gatctctttc tggacggcga aaggatgatt gcagacgcga cagttgcaca gcgcgaagcg
    26221 agactgttgc aggaagtctt ctttcttcca caccgccagt tcgtactctt gcgacagctt
    26281 aatcgccgcc gtcgggcaaa cttcttcgca gcgtccacag aagatgcagc gcccgagatt
    26341 aaactcccag gccagctctc ctgtggcgag gtcagtttca accgttaagg cgtttgacgg
    26401 gcaggcattg acgcaggccg cgcagccgat gcactgctgc gggttctgct ctggcttacc
    26461 acggaagttt ttatcaaccg caatcggctc cagcggataa gacgaggtcg ccgtgccggt
    26521 tttgataact tttttgataa aggtaaacat ggcgattcct tatttcagcg gcgagttttt
    26581 acgctcaatg ctgtagcgct cgagttcttt gtacggcacc actttgctct tcttcttacg
    26641 tacatcgacc acagtcatgc ggtcggtaca ggagtagcaa gggtccaggc taccgataat
    26701 cagcggcgca tcggaaacag tgttgccacg cagcatgtag cgcagggtcg gccagttcgc
    26761 gtaggtcgcg gcacggcagc gccagcggta cagcttctgg ttgtcgccag tcatgctcca
    26821 gtggatatca tcaccgcgcg gcgcttcggc aaagcccagc gcgaaacggt gcggaatgta
    26881 ggtaaagcct tccaccatca gcgggccacc cggcaggtta tccagaccgt agtcgatcat
    26941 gttcagcgcg gtatagactt cgttgatacg cactttcaga cgcgaaataa cgtcgcagcc
    27001 ctgctcgctg tggacttcca ttggcagcag gccataacca acaaacgggt gatcagcgcg
    27061 ggtatcgcga gcgtgtccgc tggcgcggac catcgggcca acgttactga aatcgcgggc
    27121 aatttccggg tccagacgac caatgccgat ggtgcgctgt tccatgttcg gtgtgctcag
    27181 cagcacatcc accagctcct gcacttcacg acgcatctgt tgcgccagct ggcgggtctg
    27241 gatcatgtca tctttcaaca gatcgcgacg aatcccgccg atcaggttca ggccgtaggt
    27301 tttacgcgca ccggtgagga tctcggccat tttcatggag gtttcacgca cgcggaagaa
    27361 ctgcataaag ccggagtcga agccggtaaa gtggcaggcg aggccgaggt tgagcagatg
    27421 cgagtgcagg cgttccacct ccagcagaat ggcgcggatc atctgcgcac gttctggcac
    27481 ctgaataccc atcgcgtttt ccaccgacgt ggtgtaggcg gtgctgtggg cgaagccgca
    27541 gatcccgcac acacggtcag agaggaaggt cacttcgtta taacccatgc gggtttccgc
    27601 cagtttttcc ataccgcgat ggacatagaa caagcggtag tctgcgtcga taatgttttc
    27661 gccatcgacg aacagacgga agtggcccgg ttcgtcagaa gtgacgtgca gcggaccaat
    27721 cggcacgacg ttgtttttct tgtcgcccag ttcgttgatg aactcgtagg tttcagcatc
    27781 ggtggtcggt gccggacgct gacgataatc catgctgtct ttacgcagcg gataaagttc
    27841 atccggccag tcatccggca gcaccagacg gcgttcatcc ggcagaccaa ccggaatcaa
    27901 accgtacata tcgcgcactt cgcgctcgcc ccacaccgcc gccggaacgc gcggcgtcac
    27961 ggacggatac tccggtttgt tggcatcaac ttcgacgcga accgttaccc agcacttagt
    28021 ccccttctcc atcgacagca cgtaataaac ggcgtaatga ccattcagtt tgcgttcgtc
    28081 gttaccaaaa agcaccgaca gccagccccc ctgcttgtag tagagaaact ccaccacttc
    28141 cggcagatag ttcaccttta cggtgatagt cagctgatct ttggtctgcc aggcgtggtc
    28201 cagcacgacg cccggaaatg cctcattcag cgcggcgaga taatgttgac ctaatttttc
    28261 ttcagacatg ctcaaactct ctttaatcac gccgccagca aggagacgaa cgctaaaaat
    28321 gcaaagccaa acccagccca ggtaatgcgc ggagtaatat caagacgcag acgggccatg
    28381 ctgttttcga acagcgcgat aaccaggacg ccgaccacca gttttacgat ggcaatcacc
    28441 agcgccagca gcagtccacc ggcggtgaag gtttccattt gtccccacgg aataaacacc
    28501 ccgacgaaca tctgcaacac caccagctgt ttcaggctga taccccattt catgacgcca
    28561 aagccgctgc cgctatactc agagagcgga ccttcctgca actcctgctc ggcttccgcc
    28621 aggtcgaacg gcagtttgcc catttcgata aaagtggcga acgcacaggt gcagagcgcc
    28681 agcaccagcg ggatgctttg gctcagcggc cagtgataaa cggtgtcggt aatgttgctg
    28741 atgttggtgg aaccggcaac ctgtgcggca acccacagac caagcagcaa catcggttcg
    28801 accagcacgc caagcatcgc ttcacggctc gcaccgatag cggtaaacgg gctaccggta
    28861 tccagaccgg aaatggcaaa gaagaaacgc gcgatggcga agagatacag taaggtgatc
    28921 aaatcgccca gttgcggcag cggagaaccg acggtcacca ccggcagcgc agtagcgata
    28981 gtcagcatga cgcccaccat cacatacggc gtcaggcgga acacccagcc agaggcatcc
    29041 gggccaacgc tctggcggcc cagcagtttg ataatgtcgc gatactcctg caacacgccc
    29101 ggcccgcgac ggttatgcag acgggcgcgc gccacgcggg taataccgga gagcagcggc
    29161 gcaacggcaa ataacaccag cgcctgaatt aacggatata aaacactcat tctcaggctc
    29221 ctcgtgaaac aataatcacc accagtaccg ccagttcaac cagcgccatc cggcggaaca
    29281 gcaacgcact accttcgcac tgccagcccg gcaccagcga caccggattc agccatttgc
    29341 gcagtttcag cactggcgca aacgcctgtt taaccggcat ggcaaaaccg tgagcggtaa
    29401 tcaccattga tttttcatgg tcgtagccgc acacccaggc cgcaccgcgg gaacgtgacg
    29461 gcaggcggtc gcctttgcaa atcgccataa tgatgaatgg cagcagagag catcggcagc
    29521 agccacggcg cagcaacacc gccaattacg cagcaaatcg ccagtgccac tacgcttacg
    29581 ctcatcagga gcggcgcaca ggtggcgttt tcggcttctt tggtacgcgg cgcgccgagg
    29641 aacgtgacgc catagacttt cgccatacac atcaccgcca gcgcaccggt aattgccaga
    29701 cccacagcga gcagcggccc cagcagacgg gcaacaaacg cgccactatt gctcagtttg
    29761 aaaaaggatt gatagataac ccattccccg gcaaacccgt tcagcggcgg cagcgcagcc
    29821 attgccatca acccgactaa catggcgatg gagataaccg gcattttctt gccaatacca
    29881 ccgagttttt cgatatcgcg atgaccggta cggaaccaga cgctccccgc cccgaggaac
    29941 agtacgcttt tgaacaggct atggttaagc agatggtaca gaccaccgac caggccaaga
    30001 gcaatcagcg ccggttgttc gagcgcgata cccgttacgc cagcgcccag ccccagcagg
    30061 ataatgccga tattttccag ggtgtggtaa gccagcaggc gctggatgtt gtgctccatc
    30121 agcgcataca gaccaccgac aaacgcggtg atcatgccga gcaccagcag cacgatcccc
    30181 caccacagcg gtgcattacc gcccagcagt gacagggtta aaatgcccag caggccaatt
    30241 ttcatgacta ccgtagaaaa caacgcggca gctggcgcag aggcgttagc atgtgcctgc
    30301 ggcacccagc cgtgcagcgg aataatcccg gcgagcaggc caaagccaat cacaccgagc
    30361 agccagatat cggaaccgag cggcagctgt tgcatacgca tatccagcag gcgcagatcc
    30421 agcgtgccat aacgctgcca cagcagccag caagcaatcg ccagcagcag agtgccaaga
    30481 cgccccagcg caaaccacag tttgccctct ttgctgttgc tggtgaggaa caccgcacac
    30541 aaggccatga cttcggccat taccacgaac atgccgaggt tgctggcgat gacggcgcag
    30601 acggcggcag ccatcaacat attgatctgc aagccgttgc acttcacctg cgcgtggcga
    30661 tgccagtcaa tgttgtagag gctgacaaac agaccgcaca gaccgagcgt aatcagccaa
    30721 atcgcgttaa gcggggagat ttgcacatcg tagcttacca gcgacagcgc accgctcacg
    30781 ccaaccgcgc cagtcagcac agtgaagccc gcggctgccg tatacaggct accaaccgcg
    30841 ccgccaattc cggctatcca gccacttagc gtcttttgaa aagaaaagag aaatgccaga
    30901 acagcggcgg cgacaaacca caccacgccg ctattgatca gggaaattgc gctcatttag
    30961 cctctccact ttgagcctgc tgaaacaagg tgagatcgcc aaagtccgta ttaaaagtca
    31021 gctcacgctt acgtttgctg acgcgggcga tatcggtgtt atccaccaga tgcagggctt
    31081 tggtcgggca catccgcacg caggccggac cttgttcatc aaagctacaa aggtcacatt
    31141 tgacggcgat cgcgcgaata cccggcaccc agtcaagcag cgtactgata cgcgccggag
    31201 caggcggtgc cggtggcgct ttcggggtat tggcatttgc aggaatatcc agcggacggc
    31261 tgccggaaaa ttcaattgcg ccaaacgggc aggcgatgcc gcacagcttg cagcttacgc
    31321 acaggctttc attcaactgc acggccccat caacgcgggt gatgacgtta accgggcaga
    31381 ccaccgcgca gggtgcatct tcacagtggt gacagagctg cggcgcagat tctttttcat
    31441 tcagcatcac tctcaggcgc ggcattgatt gcaggccgtg ctggcgatgc gtctctgaac
    31501 aggctgcctc acaagtgtgg cagccgatac agagcgtgga gtcagcaatt acaaaacgat
    31561 tcaccaggca ttcctcaggt gattgtcatt tttgacgaaa acatgccgat gaaatgtcat
    31621 tttcgacact catcgacacg cccatcccca aacaggcgta acgcctgcaa aacgggcaaa
    31681 gcctcagctc atgctgccgg gctttgtccc tttaccagtt ggcttaaatt caccggcaca
    31741 ttgttttcaa tggcggtgta taagctgtcg taaacgccag cgattttttc gagatagtgt
    31801 tccagaacct gttcgcgatc gcggatgttg accttgccat caatcatgcc gtcaatgctc
    31861 agttgcgcct gcgcaatccg ctgtttgtct tcgccctctt ttgtttcgac gtaatactcg
    31921 atggtgtggc tgttaaagcc atccgccagg gtgacgtaaa tacgaaaatg ttcaaaaagg
    31981 acgaaacaga gttctttgtc cggcgcgcag ctcatggcgt gatgcaggcg cgctttcgat
    32041 aacgtgatcc cctgaaccag cgaattgcag tagatgtgcc actggtcctg taggcgacga
    32101 tgccgctgtg cgatgtaatc ggctttctcg cttatttccc aaatagtcat tgtcaggtta
    32161 cccgtttaac agagatgcca gctttaagca ttttctgtgc caatttttaa tttattgtta
    32221 ttaaaacgat ttttaagcta aagatgaatt tcgtcgccgt gtcgacgtgt catttcgaca
    32281 tcatcgacat tattcacctc agggataatc aacactggca caattattgc ttgtagctgg
    32341 caatagttaa tgggaggtga tatgcacgaa ataaccctct gccaatgggc actggaattg
    32401 atcgaacagc aggccgcaaa acacggcgca aaacgcgtaa ctggggtctg gctcaaaatt
    32461 ggcgcatttt cttgtgtcga aaccagctct cttgcctttt gttttgatct ggtttgccgc
    32521 ggcagcgtgg cggaaggttg taaactgcac ctcgaagaac aagaggtcga atgctggtgt
    32581 gaaacatgcc aacagtatgt gacgctattg acccagcgcg tccgccgctg tccacagtgt
    32641 catggtgaca tgctacagat tgtggcagac gacggtttac agattcggcg gatagaaata
    32701 gaccaggagt gagcgatgtg tacaacatgc ggttgcggtg aaggcaacct gtatatcgag
    32761 ggtgatgaac ataaccctca ttccgcgttt cgtagcgcgc catttgcccc ggcggcacgc
    32821 ccgaagatga aaatcaccgg cattaaagcg cctgaattta cccccagcca gactgaagaa
    32881 ggcgacctgc attacggtca tggcgaagcg ggcactcacg caccgggcat gagccagcgt
    32941 cggatgctgg aagtcgaaat tgacgtgctg gacaaaaaca accgtctggc tgaacgcaac
    33001 cgcgcgcgct ttgctgcccg caagcaactg gtgctcaacc tggtttccag cccaggttcc
    33061 ggtaaaacca ccctgctgac ggaaacccta atgcgcctga aagacagcgt tccgtgcgcg
    33121 gttattgaag gtgaccagca aaccgtgaac gatgccgcac gcattcgcgc taccggcaca
    33181 ccagcgattc aggtgaacac aggtaaaggc tgccatcttg acgcacagat gattgccgac
    33241 gccgcaccgc gtctgccact ggacgataac ggtattctgt ttatcgaaaa cgttggcaac
    33301 ctcgtatgcc cggccagctt cgatctcggt gaaaaacaca aagtggcggt gctttccgtt
    33361 accgaaggtg aagacaaacc gctgaaatat ccgcatatgt ttgccgccgc ctcgctgatg
    33421 ctgctcaaca aagttgacct gttgccgtat ctcaactttg acgttgagaa gtgcatcgcc
    33481 tgcgcccgcg aagtcaatcc agaaattgaa atcatcctta tttccgccac cagcggtgaa
    33541 gggatggacc agtggctgaa ctggctggag acacagcgat gtgcataggc gttcccggcc
    33601 agatccgcac cattgacggc aaccaggcaa aagtcgacgt ctgcggcatt cagcgcgatg
    33661 tcgatttaac gttagtcggc agctgcgatg aaaacggtca gccgcgcgtg ggccagtggg
    33721 tactggtaca cgttggcttt gccatgagcg taattactga agccgaagca cgcgacactc
    33781 tcgacgcctt acaaaacatg tttgacgttg agccggatgt cggcgcgctg ttgtatggcg
    33841 aggaaaaata atgcgttttg ttgatgaata tcgcgcgccg gaacaggtga tgcagttaat
    33901 tgagcatctg cgcgaacgtg cttcacatct ctcttacacc gccgaacgcc ctctgcggat
    33961 tatggaagtg tgcggtggtc atacccacgc tatttttaaa ttcggcctcg accagttact
    34021 gcctgaaaac gttgagttta tccacggtcc gggttgcccg gtgtgcgtac tgccgatggg
    34081 tagaatcgac acctgcgtgg agattgccag ccatccggaa gtcatcttct gtacctttgg
    34141 cgacgccatg cgcgtaccag ggaaacaggg atcgctgttg caggcaaaag cacgcggtgc
    34201 cgatgtgcgc atcgtttact cgccgatgga tgcgttgaaa ctggcgcagg agaatccaac
    34261 ccgcaaagtg gtgttcttcg gcttaggttt tgaaaccacc atgccgacca ccgccatcac
    34321 tctgcaacag gcgaaagcgc gtgatgtgca gaatttttac ttcttctgcc agcacattac
    34381 gcttatcccg acgctgcgca gtttgctgga acagccggat aacggtatcg acgcgttcct
    34441 cgcgccgggc cacgttagta tggttatcgg cactgatgcc tataatttta tcgccagcga
    34501 ttttcatcgt ccgctggtgg tcgctggttt cgaacccctt gatctactgc aaggcgtggt
    34561 gatgctggtg gagcagaaaa tagcggccca cagcaaggta gagaatcagt atcgtcgggt
    34621 ggtaccggat gccggtaacc tgctggcgca acaggcgatt gccgatgtgt tctgtgtcaa
    34681 cggcgacagc gaatggcgcg gcttaggcgt gattgaatct tctggcgtgc acctgacgcc
    34741 ggattatcaa cgattcgatg ccgaagcaca tttccgcccg gcaccgcagc aggtctgcga
    34801 tgacccgcgc gcgcgttgtg gtgaggtatt aacgggcaaa tgtaagccgc atcaatgccc
    34861 gctgtttggt aacacctgta atcctcaaac cgcatttggt gcactgatgg tctcctccga
    34921 aggagcgtgc gccgcgtggt atcagtatcg tcagcaggag agtgaagcgt gaataatatc
    34981 caactcgccc acggcagcgg cggccaggcg atgcagcaat taatcaacag cctgtttatg
    35041 gaagcctttg ccaacccgtg gctggcagag caggaagacc aggcacgtct tgatctggcg
    35101 cagctggtag cagaaggcga tcgtctggcg ttctccaccg acagttacgt cattgacccg
    35161 ctgttctttc ctggcggtaa tatcggcaag ctggcgattt gcggcaccgc gaatgacgtt
    35221 gcggtcagtg gcgctattcc gtgctatctc tcctgtggct ttatcctcga agaaggattg
    35281 ccgatggaga cactgaaagc cgtagtgacc agcatggcag aaaccgcccg cacggcaggc
    35341 attgccatcg ttactggcga tactaaagtg gtgcagcgcg gcgcggcaga taaactgttt
    35401 atcaacaccg ctggcatggg cgcaattccg gcgaatattc actggggcgc acagacgcta
    35461 accgcaggcg atgtattgct ggttagcggt acactcggcg accacggggc gactatcctt
    35521 aacctgcgtg aacaactggg gctggatggt gaactggtca gcgactgcgc ggtgctgacg
    35581 ccgcttattc agacgctgcg tgacattccc ggcgtgaaag cgctgcgtga tgccacccgt
    35641 ggtggtgtaa acgcggtggt tcatgagttc gcggcagcct gcggttgtgg tattgaaatt
    35701 tctgaatcag cactgccggt taaacctgct gtgcgcggcg tttgcgaact gctgggactg
    35761 gacgccctta actttgccaa cgaaggcaaa ctagtaatag ctgttgaacg caacgcagca
    35821 gagcaagtgc tggcagcgtt acattcccat ccactgggga aagacgcggc gctaattggt
    35881 gaagtggtgg aacgtaaagg tgttcgtctt gccggtctgt atggtgtgaa acgaaccctc
    35941 gatttaccac acgccgaacc gcttccgcgt atatgctaat aaaattctaa atctcctata
    36001 gttagtcaat gaccttttgc accgctttgc ggtgctttcc tggaagaaca aaatgtcata
    36061 tacaccgatg agtgatctcg gacagcaagg gttgttcgac atcactcgga cactattgca
    36121 gcagcccgat ctggcctcgc tgtgtgaggc tctttcgcaa ctggtaaagc gttctgcgct
    36181 cgccgacaac gcggctattg tgttgtggca agcgcagact caacgtgcgt cttattacgc
    36241 atcgcgtgaa aaagacaccc ccattaaata tgaagacgaa actgttctgg cacacggtcg
    36301 ggtacgccgc attttgtcgc gccctgatac gctgcattgc agttacgaag aattttgtga
    36361 aacctggccg cagctggtcg caggtgggct ataccccaaa tttggtcact attgcctgat
    36421 gccactggcg gcggaagggc atatttttgg tggctgtgaa tttattcgtt atgacgatcg
    36481 tccctggagc gaaaaagagt tcaatcgtct gcaaacattt acgcagatcg tttctgtcgt
    36541 caccgaacaa atccagagcc gcgtcgtcaa caatgtcgac tatgagttgt tatgccggga
    36601 gcgcgataac ttccgcatcc tggttgccat taccaacgcg gtgctttccc gcctggatat
    36661 ggacgaactg gtcagcgaag tcgccaaaga aatccattac tatttcgaca ttgacgatat
    36721 cagtatcgtc ttacgcagcc accgtaaaaa caaactcaac atctactcca ctcactatct
    36781 tgataaacaa catcccgccc acgaacagag cgaagtcgat gaagccggaa ccctcaccga
    36841 acgcgtgttc aaaagtaaag agatgctgct gatcaatctc cacgagcggg acgatttagc
    36901 cccctatgaa cgcatgttgt tcgacacctg ggcaaccaga ttcaaacctt gtgcctgtta
    36961 ccgctgatgt ctggcgacac catgctgggc gtgctgaaac tggcgcaatg cgaagagaaa
    37021 gtgtttacca ctaccaatct gaatttgctg cgccagattg ccgaacgtgt ggcaatcgct
    37081 gtcgataacg ccctcgccta tcaggaaatc catcgtctga aagaacggct ggttgatgaa
    37141 aacctcgccc tgaccgagca gctcaacaat gttgatagtg aatttggcga gattattggc
    37201 cgcagcgaag ccatgtacag cgtgcttaaa caagttgaaa tggtggcgca aagtgacagt
    37261 accgtgctga tcctcggtga aactggcacg ggtaaagagc tgattgcccg cgcgatccat
    37321 aatctcagtg ggcgtaataa tcgccgcatg gtcaaaatga actgcgcggc gatgcctgcc
    37381 ggattgctgg aaagcgatct gtttggtcat gagcgtgggg cttttaccgg tgccagcgcc
    37441 cagcgcattg gtcgttttga actggcggat aaaagctccc tgttcctcga cgaagtgggc
    37501 gatatgccac tggagttaca gccgaagttg ctgcgtgtat tgcaggaaca ggagtttgaa
    37561 cgtctcggca gcaacaaaat cattcagacg gacgtacgtt taattgccgc gactaaccgc
    37621 gatctgaaaa aaatggtcgc cgaccgagag ttccgtagcg atctctatta ccgcctgaac
    37681 gtattcccga ttcacctgcc gccactacgc gagcgtccgg aagatattcc gctgctggcg
    37741 aaagccttta ccttcaaaat tgcccgtcgt ctggggcgca atatcgacag cattccagcc
    37801 gagacgctgc gcaccttgag caacatggag tggccgggta acgtacgcga actggaaaac
    37861 gtcattgagc gcgcagtatt gctaacacgc ggcaacgtgc tgcagctgtc attgccagat
    37921 attgctttac cggagcctga aacgccgcct gccgcaacgg ttgtcgctca ggagggcgaa
    37981 gatgaatatc agttgattgt tcgcgtgctg aaagaaacca acggcgtggt tgccgggcct
    38041 aaaggcgctg cgcaacgtct ggggctgaaa cgcacgaccc tgctgtcacg gatgaagcgg
    38101 ctgggaattg ataaatcggc attgatttaa ctgcaaattg ccggacagat ctgcctgtcc
    38161 ggcatactat tcacgaggtt ttttcggacg atatttttcc ggcagttctg gcaccggacg
    38221 cttgtcatcg atgagatgac gcacggttaa gatcggatga cgccacagca ttctcggccc
    38281 ggcccaacgc ataatctgtt tcatctcttc acgctttgca ggctggtaac agtgcaccgg
    38341 acactgctta caggctggtt tctcttcgcc gaacacacat ttatccagcc gcttttgcgc
    38401 gtaaacaaac aacgcctcgt aatgctccgg ctccgctgac gcctgcgggc atttcgcttg
    38461 ataaagatcg atcatttttt taatcgtcag tttttcacga gagatacgct tgccggacat
    38521 gctgcctcca tactcttaag gtgtatttat attacaactt aatttgaaag gggactatgg
    38581 ctctgaagga ggaggtttat tcaaccgacg caattttgcg tacttgcttc ataagcatca
    38641 cgcaaaagct gcaaaacagc atctttcccg gaaccagcat caagaactcg ccgttcgctt
    38701 cttcccctga aatgattaac tccggtatca tgtgcgcctt atgtgattac aacgaaaata
    38761 aaaaccatca caccccattt aatatcaggg aaccggacat aaccccatga gtgcaataga
    38821 aaatttcgac gcccatacgc ccatgatgca gcagtatctc aggctgaaag cccagcatcc
    38881 cgagatcctg ctgttttacc ggatgggtga tttttatgaa ctgttttatg acgacgcaaa
    38941 acgcgcgtcg caactgctgg atatttcact gaccaaacgc ggtgcttcgg cgggagagcc
    39001 gatcccgatg gcggggattc cctaccatgc ggtggaaaac tatctcgcca aactggtgaa
    39061 tcagggagag tccgttgcca tctgcgaaca aattggcgat ccggcgacca gcaaaggtcc
    39121 ggttgagcgc aaagttgtgc gtatcgttac gccaggcacc atcagcgatg aagccctgtt
    39181 acaggagcgt caggacaacc tgctggcggc tatctggcag gacagcaaag gtttcggcta
    39241 cgcgacgctg gatatcagct ccgggcgttt tcgcctgagc gaaccggccg accgcgaaac
    39301 gatggcggca gagctgcaac gcactaatcc ggcggaactg ctgtatgcag aagatttcgc
    39361 cgagatgtcg ctgattgaag gccgtcgcgg cctgcgccgt cgcccgctgt gggagtttga
    39421 aatcgacacc gcgcgccagc agttgaatct gcaatttggc acccgcgatc tggtcggttt
    39481 tggcgtcgag aacgcgccgc gcggactttg tgctgccggt tgtctgttgc agtatgcgaa
    39541 agatacccaa cgcacgaccc tgccgcatat tcgttctatc accatggaac gtgagcagga
    39601 cagcatcatt atggatgccg cgacacgtcg taacctggaa attactcaga acctggcggg
    39661 cggtgcggaa aatacgctgg cttctgtgct cgactgcacc gtcacgccga tgggtagtcg
    39721 tatgctgaaa cgctggctgc atatgccagt gcgcgatacc cgcgtgttgc ttgagcgcca
    39781 gcaaactatt ggcgcattgc aggatttcac cgccgggcta cagccggtac tgcgtcaggt
    39841 cggcgacctt gaacgtattc tggctcgtct ggctttacga actgctcgcc cacgcgatct
    39901 ggcccgtatg cgccacgctt tccagcaact gccggagctg cgtgcacagt tagaaactgt
    39961 cgatagtgca ccggtacagg cgctacgtga gaagatgggc gagtttgccg agctgcgcga
    40021 tctgctggag cgagcaatca tcgacacacc gccggtgctg gtacgcgacg gtggtgttat
    40081 cgcatcgggc tataacgaag agctggatga gtggcgcgcg ctggctgacg gcgcgaccga
    40141 ttatctggag cgtctggaag tccgcgagcg tgaacgtacc ggcctggaca cgctgaaagt
    40201 tggctttaat gcggtgcacg gctactacat tcaaatcagc cgtgggcaaa gccatctggc
    40261 acccatcaac tacatgcgtc gccagacgct gaaaaacgcc gagcgctaca tcattccaga
    40321 gctaaaagag tacgaagata aagttctcac ctcaaaaggc aaagcactgg cactggaaaa
    40381 acagctttat gaagagctgt tcgacctgct gttgccgcat ctggaagcgt tgcaacagag
    40441 cgcgagcgcg ctggcggaac tcgacgtgct ggttaacctg gcggaacggg cctataccct
    40501 gaactacacc tgcccgacct tcattgataa accgggcatt cgcattaccg aaggtcgcca
    40561 tccggtagtt gaacaagtac tgaatgagcc atttatcgct aacccgctga atctgtcgcc
    40621 gcagcgccgt atgttgatta ttaccggccc gaacatgggc ggtaaaagta cctatatgcg
    40681 ccagaccgca ctgattgcgc tgatggccta catcggcagc tatgtaccgg cacaaaaagt
    40741 cgagattgga cctatcgatc gcatctttac ccgcgtaggc gcggcagatg acctggcttc
    40801 cgggcgctca acctttatgg tggagatgac tgaaaccgcc aatattttac ataacgccac
    40861 cgaatacagt ctggtgttaa tggatgagat cgggcgtgga acgtccacct acgatggtct
    40921 gtcgctggcg tgggcgtgcg cagaaaatct ggcgaataag attaaggcat tgacgctgtt
    40981 tgccacccac tatttcgagc tgacccagct accggagaaa atggaagacg tcgccaacgt
    41041 gcatctcgat gcgctggagc acggagacac cattgccttt atgcatagcg tgcaggatgg
    41101 cgcggcgagc aaaagctacg gcctggcggt tgcagctctg gcaggcgtgc caaaagaggt
    41161 gattaagcgc gcacggcaaa aactgcgtga gctggaaagc atttcgccga acgccgccgc
    41221 tacgcaagtg gatggtacgc aaatgtcttt gctgtcagta ccggaagaaa cctcgccagc
    41281 ggtcgaagct ctggaaaacc tggacccgga ttcactgact ccgcgtcagg cgctggaatg
    41341 gatttatcgc ttgaagagcc tggtgtaata acaattcccg atagtctttt gctatcggga
    41401 atattaacga caactgacga ataaaataaa aacaccctgt ataataggaa agcttatttt
    41461 acagggtaaa accatgccat ctacacgcta tcaaaaaatt aatgcccatc actatcgcca
    41521 tatatgggtc gttggtgata ttcatggtga ataatcaatt attacaatcc cgcttacatc
    41581 aactctcttt ttgccctgaa accgacttac ttatttctgt cggcgataat attgatcgtg
    41641 ggccggagag tcttgacgtc ctgcgcctgc taaaccagcc ctggtttatc tccgttaaag
    41701 gcaaccacga agcaatggcg ctggatgcgt tcgcgaccgg cgatggcaat atgtggcttg
    41761 ccagcggtgg tgactggttt ttcgatttaa atgattcaga gcaacaagag gcaatagatc
    41821 tgttgctgaa attccatcac cttccacata ttattgaaat cactaacgac ataataaaat
    41881 atgtcatcgc acatgcagat tatccgggtg atgaatatct ctttggcaaa gaaatagcgg
    41941 agagcgaatt actctggcct gtttatcgtg tgcagaaatc gcttaatggc gagttacaac
    42001 aaataaacgg cgctgattat tttatatttg gacatatgat gtttgataac attcagacgt
    42061 tcgctaacca gatttatatt gataccggat cgccgaaaag tgggcggctg tcattttata
    42121 aaataaggta gtctcatgct tcttctgtga agcatgagta accagatgtt attgcaggc
//
LOCUS       DADMHC010000005        41899 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.005, whole genome shotgun sequence.
ACCESSION   DADMHC010000005 DADMHC010000000
VERSION     DADMHC010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 41899)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41899)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41899
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.005"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            45..2207
                     /gene="ybiO"
                     /locus_tag="JNZ57_000230"
     CDS             45..2207
                     /gene="ybiO"
                     /locus_tag="JNZ57_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001267224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel protein"
                     /protein_id="HAY8826578.1"
                     /translation="MRWILFILFCLLGAPAHAVSIPGVTTTTTTDSTTEPAPEPDIEQ
                     KKAAYGALADVLDNDTSRKELIDQLRTVAATPPAEPVPKIVPPTLVEEQTVLQKVTEV
                     SRHYGEALSARFGQLYRNITGSPHKPFNPQTFSNALTHFSMLAVLVFGFYWLIRLCAL
                     PLYRKMGLWARQKNRERSNWLQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRT
                     IAFQQSLFLNAFALIEFFKAVLRLIFCPNVAELRPFTIHDETARYWSRRLSWLSSLIG
                     YGLIVAVPIISNQVNVQIGALANVIIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLA
                     FFSLFIRAFALVWRWLASAYFIVLFFFSLFDPGNSLKFMMGATVRSLAIIGIAAFVSG
                     MFSRWLAKTITLSPHTQRNYPELQKRLNGWLSAALKTARILTVCVAVMLLLSAWGLFD
                     FWNWLQNGAGQKTVDILIRIALILFFSAVGWTVLASLIENRLASDIHGRPLPSARTRT
                     LLTLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDIITGV
                     FIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGI
                     GSVVANYDVDRHEDADKANQALKDAVAELMENEEIRGLIIGEPNFAGIVGLSNTAFTL
                     RVSFTTLPLKQWTVRFALDSQVKKHFDLVGVRAPVQTY"
     gene            complement(2267..3193)
                     /gene="rlmF"
                     /locus_tag="JNZ57_000231"
     CDS             complement(2267..3193)
                     /gene="rlmF"
                     /locus_tag="JNZ57_000231"
                     /EC_number="2.1.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415328.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(1618)-N(6))-methyltransferase
                     RlmF"
                     /protein_id="HAY8826579.1"
                     /translation="MSAQKPGLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSV
                     DFANPLAVKALNKALLAHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIP
                     ANASILDIGVGANCIYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLR
                     RQKESGAIFNGIIHKNEQYDATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGG
                     QQQELWCEGGEVAFIKKMIEESKGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVV
                     KKEMAQGQKQSRFIAWTFMNDEQRRRFVNRQR"
     gene            3469..3729
                     /locus_tag="JNZ57_000232"
     CDS             3469..3729
                     /locus_tag="JNZ57_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415327.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HAY8826580.1"
                     /translation="MKKCLTLLIATVLSGISLTAYAAQPMSNLDSGQLRPAGTVSATG
                     ASNLSDLEDKLAEKAREQGAKGYVINSAGGNDQMFGTATIYK"
     gene            3994..6276
                     /locus_tag="JNZ57_000233"
     CDS             3994..6276
                     /locus_tag="JNZ57_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catecholate siderophore receptor Fiu"
                     /protein_id="HAY8826581.1"
                     /translation="MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTL
                     VVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVG
                     AFFAGENGNSTTGDAIYMRGADTSNSIYIDGIRDIGSVSRDTFNTEQVEVIKGPSGTD
                     YGHSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGE
                     KTHDAGRDKVKNERYGVAPSVAFGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSA
                     PSAGTAALNHSGKVDTHNFYGTDSDYDDSTTDTATMRFEHDINDNTTIRNTTRWSRVK
                     QDYLMTAIMGGASNITQPTSDVNSWTWSRTANTKDVSNKILTNQTNLTSTFYTGSIGH
                     DVSTGVEFTRETQTNYGVNPVTLPAVNIYHPDSSIHPGGLTRNGANANGQTDTFAIYA
                     FDTLQITRDFELNGGIRLDNYHTEYDSATACGGSGRGAITCPAGVAKGSPVTTVDTAK
                     SGNLVNWKAGALYHLTENGNVYINYAVSQQPPGGNNFALAQSGSGNSANRTDFKPQKA
                     NTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQYGKKRVEGYEISVAGNI
                     TPAWQVIGGYTQQKATIKNGKDVAQDGSSSLPYTPEHAFTLWSQYQATDDISVGAGAR
                     YIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLDFQLNVYSLFDTDYVASINKS
                     GYRYHPGEPRTFLLTANMHF"
     gene            6282..6995
                     /gene="ybiX"
                     /locus_tag="JNZ57_000234"
     CDS             6282..6995
                     /gene="ybiX"
                     /locus_tag="JNZ57_000234"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706682.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKHD-type hydroxylase YbiX"
                     /protein_id="HAY8826582.1"
                     /translation="MWGAGPTFWRNCMMYHIPGVLSPQDVARFREQLEQAEWVDGRVT
                     TGAQGAQVKNNQQVDTRSTLYAALQNEVLNAVNQHALFFAAALPRTLSTPLFNRYQNN
                     ETYGFHVDGAVRSHPQSGWMRTDLSATLFLSDPQSYDGGELVVNDTFGQHRVKLPAGD
                     LVLYPSSSLHCVTPVTRGVRVASFMWIQSMIRDDKKRAMLFELDKNIQSLKSRYGENE
                     EILSLLNLYHNLLREWSEI"
     gene            7069..7335
                     /gene="ybiI"
                     /locus_tag="JNZ57_000235"
     CDS             7069..7335
                     /gene="ybiI"
                     /locus_tag="JNZ57_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-type zinc finger protein YbiI"
                     /protein_id="HAY8826583.1"
                     /translation="MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLYECEECGA
                     PIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR"
     gene            7619..7849
                     /locus_tag="JNZ57_000236"
     CDS             7619..7849
                     /locus_tag="JNZ57_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HAY8826584.1"
                     /translation="MALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASPLDALEAK
                     LAEKAAAAGASGYSITSATNNNKLSGTAVIYK"
     gene            complement(8077..9162)
                     /locus_tag="JNZ57_000237"
                     /pseudo
     CDS             complement(8077..9162)
                     /locus_tag="JNZ57_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308906.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="malate/lactate/ureidoglycolate dehydrogenase"
     gene            complement(9303..10265)
                     /gene="ybiB"
                     /locus_tag="JNZ57_000238"
     CDS             complement(9303..10265)
                     /gene="ybiB"
                     /locus_tag="JNZ57_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein YbiB"
                     /protein_id="HAY8826585.1"
                     /translation="MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGG
                     VLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLA
                     ILLHKLGFPVVVQGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGA
                     FCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDI
                     GGRALLMHGTEGEVYANPQRCPQINLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQ
                     WIERCLAGSEPIPESLKIQMACCLEATGEAATISDGLARVNQAF"
     gene            complement(10293..12443)
                     /gene="dinG"
                     /locus_tag="JNZ57_000239"
     CDS             complement(10293..12443)
                     /gene="dinG"
                     /locus_tag="JNZ57_000239"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HAY8826586.1"
                     /translation="MALTAALKAQIAAGYKALQEQIPDFIPRAPQRQMIADVAKTLAG
                     EEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLKK
                     IIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLK
                     GDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCFNRNCYYYRECPFFVARREIQEAE
                     VVVANHALVMAAMESEAVLPDPKNLLLVLDEGHHLPDVARDALEMSAEITAPWYRLQL
                     DLFTKLVATCMEQFRPKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEH
                     RFAMGELPDEVLEICQRLAKLTEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQMNRA
                     LGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWR
                     SIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRFE
                     PSIDNEEQHIAEMAAFFREQVESKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQSD
                     QPRYRLVELHRKRVANGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVI
                     TEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKR
                     LLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR"
     gene            12563..13045
                     /gene="ybiA"
                     /locus_tag="JNZ57_000240"
     CDS             12563..13045
                     /gene="ybiA"
                     /locus_tag="JNZ57_000240"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-glycosidase YbiA"
                     /protein_id="HAY8826587.1"
                     /translation="MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTW
                     PTSEHYFQAQKFLDEKYREEIRRVSSPMVAARMGRNRSKPLRKNWESVKEQVMRKALR
                     AKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGNGKGKNRLGYLLMELREQLAIEK
                     "
     gene            complement(13277..14641)
                     /gene="rhlE"
                     /locus_tag="JNZ57_000241"
     CDS             complement(13277..14641)
                     /gene="rhlE"
                     /locus_tag="JNZ57_000241"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlE"
                     /protein_id="HAY8826588.1"
                     /translation="MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMAS
                     AQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL
                     NIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADR
                     MLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASD
                     QVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIH
                     GNKSQGARTRALADFKSSDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIG
                     RTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQ
                     QRGGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKP
                     AAAQ"
     gene            14870..15541
                     /gene="cecR"
                     /locus_tag="JNZ57_000242"
     CDS             14870..15541
                     /gene="cecR"
                     /locus_tag="JNZ57_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CecR"
                     /protein_id="HAY8826589.1"
                     /translation="MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNTTTREIAAQAGQN
                     IAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRA
                     CRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDA
                     NDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGL
                     SQRSL"
     gene            15541..16539
                     /gene="hlyD"
                     /locus_tag="JNZ57_000243"
     CDS             15541..16539
                     /gene="hlyD"
                     /locus_tag="JNZ57_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein HlyD"
                     /protein_id="HAY8826590.1"
                     /translation="MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLKLYGNVDIRT
                     VNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQVKAGVSVAQAQYDLML
                     AGYRDEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQA
                     TLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTR
                     AVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQ
                     IGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGNEAGHE"
     gene            16532..18268
                     /locus_tag="JNZ57_000244"
     CDS             16532..18268
                     /locus_tag="JNZ57_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308899.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY8826591.1"
                     /translation="MNDAVITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGA
                     GKTTLMRMLAGLLKPDSGNATMIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLN
                     LYADLRSVTDEARKQTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVL
                     LLDEPGVGVDPISRRELWQMVHELAGEGMLILWSTSYLDEAEQCRDVLLMNEGELLYQ
                     GEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQVSDGMIQGKSVRLILKKEATPD
                     DIRHADGMPEININETTPRFEDAFIDLLGGAGTSESPLGAILHTVEGTPGETVIEAKE
                     LTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMD
                     LKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGL
                     KSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVE
                     KGVTVMVTTHFMDEAEYCDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTMEQAFIQ
                     LIHDWDKEHSNE"
     gene            18261..19394
                     /locus_tag="JNZ57_000245"
     CDS             18261..19394
                     /locus_tag="JNZ57_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY8826592.1"
                     /translation="MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFG
                     YGINLDSSKLRVGILLEQRSEATLDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRG
                     LVVIPVDFAEQMERANATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQT
                     FEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLS
                     TEITRTELLLCKLIPYYFLGMLAMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTL
                     GMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFV
                     STLQSLFLAGNIPVVLVVNVLFLIASAVMFIGLTWLKTKRRLD"
     gene            19405..20511
                     /locus_tag="JNZ57_000246"
     CDS             19405..20511
                     /locus_tag="JNZ57_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY8826593.1"
                     /translation="MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLE
                     VTNATIAIYDEDNGEHSVELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFP
                     ADFSRKLDTFQTAPLQLILDGRNSNSAQIAANYLQQIVKNYQQELLEGKPKPNNSELV
                     VRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQI
                     FIGKAVPALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISS
                     LCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLK
                     DASLDIVWNSLWPLLVITATTGSAAYAMFRRKVM"
     gene            complement(20473..20883)
                     /locus_tag="JNZ57_000247"
     CDS             complement(20473..20883)
                     /locus_tag="JNZ57_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8826594.1"
                     /translation="MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVGVGL
                     CALYCVTVVMMLVFQRHPEQRWREVADVLEELTTTWYFGAALIVLWLLSRVLENNFLL
                     AIAGLAILAGPAVVSLLAKDKKLHHLTSKHRVRR"
     gene            21016..21777
                     /locus_tag="JNZ57_000248"
     CDS             21016..21777
                     /locus_tag="JNZ57_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HAY8826595.1"
                     /translation="MPDQTQQFSFKVLTINIQKGFTAFNRRFILPELRDAVRTVSADI
                     VCLQEVMGAHEVHPLHVENWPDTSHYEFLADTMCRDFAYGRNAVYPEGHHGNAVLSRY
                     PIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLREAHRQAQLAMLAEW
                     VNELPDGEPVLVAGDFNDWRQKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLD
                     RIYVKNASASAPTALPLRTWRHLSDHAPLSAEIHL"
     gene            21774..23015
                     /gene="clsB"
                     /locus_tag="JNZ57_000249"
     CDS             21774..23015
                     /gene="clsB"
                     /locus_tag="JNZ57_000249"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase ClsB"
                     /protein_id="HAY8826596.1"
                     /translation="MKCSWREGNKIQLLENGEQYYPAVFKAIGEAQERIILETFIWFE
                     DNVGKQLHAALLAAAQRGVKAEVLLDGYGSPDLSDEFVNKLTAAGVVFRYYDPRPRLF
                     GMRTNVFRRMHRKIVVIDARIAFIGGLNYSAEHMSSYGPEAKQDYAVRLEGPIVKDIL
                     QFELENLPGQSAARRWWRRHHKAEENRQPGEAQVLLVWRDNEEHRDDIERHYLKMLTQ
                     ARREVIIANAYFFPGYRFLHALRKAARRGVRIKLIIQGEPDMPIVRVGARLLYNYLVK
                     GGVQVFEYRRRPLHGKVALMDDHWATVGSSNLDPLSLSLNLEANVIIHDRHFNQTLRD
                     NLNGIIAADCQQVDETMLPKRTWWNLTKSVLAFHFLRHFPALVGWHPAHTPRLTQVDP
                     PAQPTMETQDRVETENTGVKP"
     gene            23015..23971
                     /locus_tag="JNZ57_000250"
                     /pseudo
     CDS             23015..23971
                     /locus_tag="JNZ57_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415309.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0104 family protein"
     gene            complement(24007..24720)
                     /locus_tag="JNZ57_000251"
     CDS             complement(24007..24720)
                     /locus_tag="JNZ57_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706665.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HAY8826597.1"
                     /translation="MESYSQNSNKLDFQHETRILNGIWLITALGLVATAGLAWGAKYL
                     EITATKYDSPTMYVAIGLLLVCMYGLSKDINKINAVIAGVIYLFLLSLVAIVVASLVP
                     VYAIIIVFSTAGAMFLISMLAGLLFNVDPGSHRFIIMMTLTGLALVIIVNAALMSERP
                     IWVISCLVIVLWPGIISHGRNKLLELAGKCHSEELWSPVRCAFTGALTLYYYFIGFFG
                     ILAAIAITLVWQRHTRFFH"
     gene            complement(24926..25630)
                     /locus_tag="JNZ57_000252"
     CDS             complement(24926..25630)
                     /locus_tag="JNZ57_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HAY8826598.1"
                     /translation="MDRFPRSDSIVQPRAGLQTYMAQVYGWMTVGLLLTAFVAWYAAN
                     SAAVMELLFTNRVFLIGLIIAQLALVIVLSAMIQKLSAGVTTMLFMLYSALTGLTLSS
                     IFIVYTAASIASTFVVTAGMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFW
                     LKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLD
                     FINLFLMLLRIFGNRR"
     gene            complement(25767..26219)
                     /gene="moaE"
                     /locus_tag="JNZ57_000253"
     CDS             complement(25767..26219)
                     /gene="moaE"
                     /locus_tag="JNZ57_000253"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase catalytic subunit MoaE"
                     /protein_id="HAY8826599.1"
                     /translation="MAETKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLG
                     DSVKALTLEHYPGMTEKALAEIVDEARNRWPLGRVTAIHRIGELWPGDEIVFVGVTSA
                     HRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARESDQQAAKRW"
     gene            complement(26221..26466)
                     /gene="moaD"
                     /locus_tag="JNZ57_000254"
     CDS             complement(26221..26466)
                     /gene="moaD"
                     /locus_tag="JNZ57_000254"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase sulfur carrier subunit"
                     /protein_id="HAY8826600.1"
                     /translation="MIKVLFFAQVRELVGTDATEVAADFPTVEALRQHMAAQSDRWAL
                     ALEDGKLLAAVNQTLVSFDHPLTDGDEVAFFPPVTGG"
     gene            complement(26459..26944)
                     /gene="moaC"
                     /locus_tag="JNZ57_000255"
     CDS             complement(26459..26944)
                     /gene="moaC"
                     /locus_tag="JNZ57_000255"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HAY8826601.1"
                     /translation="MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMRSETLAMI
                     IDGRHHKGDVFATARIAGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETL
                     CRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKVEAD
                     D"
     gene            complement(26947..27459)
                     /gene="moaB"
                     /locus_tag="JNZ57_000256"
     CDS             complement(26947..27459)
                     /gene="moaB"
                     /locus_tag="JNZ57_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein B"
                     /protein_id="HAY8826602.1"
                     /translation="MSQVSTEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHV
                     VDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGF
                     GEVFRMLSFEEIGTSTLQSRAVAGVANKTLIFAMPGSTKACRTAWENIIAPQLDARTR
                     PCNFHPHLKK"
     gene            complement(27481..28470)
                     /gene="moaA"
                     /locus_tag="JNZ57_000257"
     CDS             complement(27481..28470)
                     /gene="moaA"
                     /locus_tag="JNZ57_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HAY8826603.1"
                     /translation="MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNK
                     GFLTVDEIRRVTRAFASLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNG
                     YRLERDVANWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVK
                     VNTVLMRDVNHHQLDTFLNWIQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELL
                     RRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSIGKLYLCLF
                     GEGGVNLRDLLEDDTQQQALEARISVALREKKQTHFLHQNNTGITQNLSYIGG"
     regulatory      complement(28458..28602)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            28867..29775
                     /gene="yvcK"
                     /locus_tag="JNZ57_000258"
     CDS             28867..29775
                     /gene="yvcK"
                     /locus_tag="JNZ57_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine diphosphate-N-acetylglucosamine-binding
                     protein YvcK"
                     /protein_id="HAY8826604.1"
                     /translation="MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDN
                     GGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLK
                     ALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTP
                     IQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMV
                     YIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVL
                     EASDIPYRHDRQLLHNALEKALQALG"
     gene            complement(29967..31988)
                     /gene="uvrB"
                     /locus_tag="JNZ57_000259"
     CDS             complement(29967..31988)
                     /gene="uvrB"
                     /locus_tag="JNZ57_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HAY8826605.1"
                     /translation="MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSG
                     KTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYV
                     PSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLH
                     LTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFD
                     EEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLE
                     NNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGL
                     LVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYV
                     SATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVL
                     VTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLRE
                     GLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIG
                     ETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVP
                     MDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS"
     gene            complement(32567..33244)
                     /gene="bioD"
                     /locus_tag="JNZ57_000260"
     CDS             complement(32567..33244)
                     /gene="bioD"
                     /locus_tag="JNZ57_000260"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706656.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HAY8826606.1"
                     /translation="MSKRYFVTGTDTEVGKTVASCALLQAAKAVGYRTAGYKPVASGS
                     EKTPEGLRNSDALALQHNSSLQLDYAIVNPYTFAEPTSPHIISAQEGRPIESLVMSAG
                     LRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTA
                     QAIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGK
                     YINLALL"
     gene            complement(33237..33992)
                     /gene="bioC"
                     /locus_tag="JNZ57_000261"
     CDS             complement(33237..33992)
                     /gene="bioC"
                     /locus_tag="JNZ57_000261"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HAY8826607.1"
                     /translation="MATVNKQAIAAAFGRAAAHYEQHAELQRRSADVLLAMLPQRKYT
                     HVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATA
                     TFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTLVQGSLPELHQAWQAVDERP
                     HANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRIL
                     TRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE"
     gene            complement(33979..35133)
                     /gene="bioF"
                     /locus_tag="JNZ57_000262"
     CDS             complement(33979..35133)
                     /gene="bioF"
                     /locus_tag="JNZ57_000262"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HAY8826608.1"
                     /translation="MSWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNF
                     SSNDYLGLSHHPQIIRAWQQGAEQFGVGSGGSGHVSGYSVAHQALEEELAEWLGYSRA
                     LLFISGFAANQAVIAAMMAKEDRIVADRLSHASLLEAASLSPSQLRRFVHNDVTHLAR
                     LLASPCPGQQLVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRG
                     SCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYNTSMPPAQAQAL
                     RASLAVIRRDEGDARREKLVSLIARFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQL
                     AEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG"
     gene            complement(35130..36170)
                     /gene="bioB"
                     /locus_tag="JNZ57_000263"
     CDS             complement(35130..36170)
                     /gene="bioB"
                     /locus_tag="JNZ57_000263"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HAY8826609.1"
                     /translation="MAHRPRWTLSQVAELFEKPLLDLLFEAQQVHRQHFDPRQVQVST
                     LLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAW
                     KNPNERDMPYLEQMVQGVKDLGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEF
                     YGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPES
                     VPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMC
                     FMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMT
                     PDTDEYYNAAAL"
     gene            36257..37546
                     /gene="bioA"
                     /locus_tag="JNZ57_000264"
     CDS             36257..37546
                     /gene="bioA"
                     /locus_tag="JNZ57_000264"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HAY8826610.1"
                     /translation="MTKDDLAFDQRHIWHPYTSMTSPLPVYPVVSAEGCELILSDGRR
                     LIDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQP
                     LECVFLADSGSVAVEVAMKMALQYWQAKGEVRQRFLTFRNGYHGDTFGAMSVCDPDNS
                     MHNLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMVAHRHEIAAVIIEPIVQGAG
                     GMRMYHPEWLKRIRKMCDREGILLIADEIATGFGRTGKLFACEYAEIAPDILCLGKAL
                     TGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQ
                     QVAAIEVQLREQLAPARDAEMVADVRVLGAIGVVETTRPVNMAALQKFFVEQGVWIRP
                     FGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ"
     gene            37605..38081
                     /locus_tag="JNZ57_000265"
     CDS             37605..38081
                     /locus_tag="JNZ57_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase inhibitor"
                     /protein_id="HAY8826611.1"
                     /translation="MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTK
                     SFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTG
                     YDGAAPPKDETHRYIFTVHALDVEHIDVDEGASGAMVGFNVHFHSLASASITAMFS"
     gene            38233..39516
                     /locus_tag="JNZ57_000266"
     CDS             38233..39516
                     /locus_tag="JNZ57_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative acyl-CoA thioester hydrolase"
                     /protein_id="HAY8826612.1"
                     /translation="MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPI
                     LSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVD
                     AAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPA
                     DWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENT
                     LGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVT
                     NSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFN
                     AFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVD
                     DNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK"
     gene            complement(39657..41894)
                     /locus_tag="JNZ57_000267"
     CDS             complement(39657..41894)
                     /locus_tag="JNZ57_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000477909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydratase"
                     /protein_id="HAY8826613.1"
                     /translation="MFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMD
                     KLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVF
                     GLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGE
                     LVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVG
                     PGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYY
                     DGCISVDLSAIKSMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLL
                     DKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDL
                     AKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQM
                     SAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGLVKGATQQ
                     PLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNQIGLAEF
                     TLSRRDPGYVGRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMV
                     YAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEV
                     GDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFN
                     KNRQM"
BASE COUNT         9801 a        11314 c        10812 g         9972 t
ORIGIN      
        1 catctatact tatctttttg ctctgttttc tcactggagg agtcatgcgg tggatcctgt
       61 tcatcctctt ctgcctgctg ggcgcacctg cccacgcggt atccataccc ggcgttacaa
      121 ccacaacgac aacggactca acgactgaac cggccccgga accggatatc gaacaaaaaa
      181 aagcggccta tggcgcactg gcggatgtgc tggataacga cacctcgcgt aaagaattga
      241 tcgaccagtt gcgtactgtc gccgcgacgc cccctgcgga accggtcccg aagatcgtgc
      301 cgccgacgct ggttgaagag caaaccgtgc tgcaaaaggt caccgaagtc agccgccatt
      361 atggtgaagc cctttccgcc cgcttcgggc aactttatcg caatattacc ggctccccgc
      421 ataagccgtt taatccacaa acattcagca atgcgctgac ccatttttca atgttagcgg
      481 tattagtgtt tggtttttac tggctgattc gcctgtgcgc actgccgctg tatcgcaaaa
      541 tgggcctgtg ggcgcggcaa aaaaatcgtg agcgcagtaa ctggttgcag cttccggcga
      601 tgattatcgg ggcgtttatt atcgacctac tgttactggc actgacatta tttgtcggcc
      661 aggtattaag cgacaacctg aatgcaggca gtcgcaccat cgctttccaa caaagtttgt
      721 ttctcaacgc ctttgccctg attgaatttt tcaaagctgt actacgcctg attttttgcc
      781 caaacgtggc tgaactgcgc ccgttcacga ttcatgacga gaccgcccgt tactggagtc
      841 gtcgcctgag ctggttaagc agtttgatag gttatggcct gattgtggcc gtgccgatta
      901 tctctaatca ggtgaatgta cagataggtg cgctggcgaa cgtcatcatt atgctgtgca
      961 tgaccgtctg ggcgttgtac ctgatctttc gcaataaaaa agagattacc caacatttgc
     1021 tcaactttgc ggagcattcg ctggcctttt tcagcctgtt tatccgcgcc tttgcgctgg
     1081 tgtggcgctg gctggcaagc gcctatttta tcgtgctgtt tttcttttcg ttgttcgatc
     1141 cgggcaacag cctgaaattt atgatgggtg caacggtgcg cagcctggcg attattggta
     1201 tcgcagcgtt tgtttccggt atgttttccc gctggctggc gaaaaccatc accctctcgc
     1261 cacatactca gcgtaactat ccggagttgc aaaaacggct gaatggctgg ctttcggcgg
     1321 cgctgaaaac ggcgcgtatt ctgaccgtct gcgtggcggt aatgttgctg ttgagcgcat
     1381 ggggattgtt cgatttctgg aactggctgc aaaacggtgc ggggcagaaa accgtagata
     1441 tcctgatccg tatcgcactt attctttttt tctcggcggt tggctggacg gtgctcgcca
     1501 gtttgatcga aaaccggctg gcttcggata ttcatggccg cccgctaccc agcgcccgta
     1561 cgcgtaccct gctgacgctg tttcgtaacg cgctggcggt gattatcagt accatcacca
     1621 tcatgattgt gttgtcggaa atcggcgtca atatcgcgcc attgctggca ggtgccgggg
     1681 cattaggtct ggctatctcg tttggttcgc aaacgctggt gaaagatatc attaccgggg
     1741 tgtttattca gtttgaaaac ggcatgaaca ctggagattt ggtgactatc gggccgttga
     1801 ccggcacagt ggaacggatg tcgattcgct ccgtgggcgt gcgccaggat accggggcgt
     1861 atcacatcat tccgtggtct tcgataacca cctttgctaa cttcgtccgc ggtattggtt
     1921 cggtagtggc aaactacgat gttgatcgcc atgaagatgc tgataaagcc aatcaggcac
     1981 tgaaagatgc ggtagcggaa ttgatggaaa acgaagaaat tcgcgggctg attattggtg
     2041 aaccgaattt tgccgggatt gtcggcttaa gcaataccgc gtttacactg cgtgtttcgt
     2101 tcaccacgct gccactcaaa cagtggacgg tacgctttgc cctcgacagc caggtgaaaa
     2161 aacatttcga cctggtgggc gttcgcgcgc cagtgcagac ttattaggtg ctgcctactc
     2221 cgggcgcgac cccggctgaa ccgttaccgc cgggggagcc aacgctttaa cgctggcgat
     2281 tgacaaaacg gcggcgctgc tcgtcgttca taaaggtcca ggcaataaag cgactctgct
     2341 tttgcccctg ggccatctct ttttttacca ccttcaccgc gcccacgtcg gtcagagcac
     2401 gatacaacgg cggtaagttt tcaccacgag ataccagcga ggtaaaccac atcacctgct
     2461 tcgcgaagcc tttgctctct tcaatcatct ttttgataaa ggcgacttca ccaccttcac
     2521 accacaactc ctgttgctga ccaccaaagt tcagtgcatc gtctttgttc agccccaggt
     2581 tacggcgttt acgctcacta cctgcccgcg ctgcagcggc ggaatcgtgg aatggcgggt
     2641 tacacaaggt cgcgtcgtat tgctcgtttt tatggatgat gccgttaaaa attgccccac
     2701 tttctttttg ccgacgcaga cgaatggcgc ggttaagccc cggattagca ctgataatcg
     2761 cctgcgcact gcttaacgcc tggctgctgg tttcactacc ggtaaaacgc cagccatatt
     2821 catgtacgcc aatcagcgga taaatacagt tcgcaccaac gccgatatcc agaatgctgg
     2881 cattcgctgg aattgttccg cttgcttcag ccagtaaatc ggcaaggtga tgaatataat
     2941 ccgcccggcc cggtactggt gggcagagaa aaccgtcggg gatatcccag ttcgctacgg
     3001 cgtaaaaatg ggccagcaac gccttattga gcgccttcac cgccagcgga ttggcaaagt
     3061 ctacgctttg ctccccggcg ggtgtaagcg tgaggaattg cctgagttca ggattgacct
     3121 gacaaagcgt ggcgagatcg tagcggctgt gatgacggtt gcgcggatgc aaccccggtt
     3181 tctgggcgga catagcattc tcctttaagc agcggcgtaa gatacccgca taacgcgaca
     3241 gggtaaatat ctggctgcgt ttatcattcc ccaaaacctt aacatggcta tggtttatgg
     3301 caattcatca taaaaatcag cattatgcat gtcattgatt tgtcttattt tgtaaaaata
     3361 tatcgttcaa aaaataagca cacctctgtc aattttttgc gtcatttgca tcgcgcaggc
     3421 gacctacact tatcaggcac tacccgttgt atttatgagg atgtcattat gaaaaagtgc
     3481 ctcacactac tgattgccac cgtcctgagc ggaatctctc tcacggctta tgccgcgcaa
     3541 ccgatgagta acctggacag cggtcagcta cggcccgccg gtaccgtttc ggcaactggc
     3601 gcatcaaacc taagcgatct ggaggataaa ctggcagaaa aagcgcgcga acaaggcgcg
     3661 aaaggttatg tcattaattc cgcaggcgga aatgaccaga tgttcggtac tgcaaccatc
     3721 tacaaataac cccaccaacg taactgcatt cgcctctgga tgcagttttc gcctgttttg
     3781 taatcaaaaa acatcaaata tgaactcaat gtaaataaat gtatttcttt ttcgcgcaat
     3841 gggtgataga aaatcgcgcc aagtgataat gcttatcaaa attattatca cttgcacgaa
     3901 cactatcacg ggattaacag tggcatcgca tccgcagaga tgctttctcg tggcagtgaa
     3961 aatttcaaca tataagaaaa agtcacctgc aaaatggaaa acaatcgcaa tttccctgcc
     4021 agacaatttc attcgctcac gttctttgcc ggtctttgta ttggcatcac gcctgtggct
     4081 caggcactcg ccgccgaagg gcaaactaac gcggatgaca cgctggttgt cgaagcatca
     4141 acgccttcgc tttatgcgcc acaacaatct gccgatccga aattctcgcg tccggtagcg
     4201 gatactaccc gcacgatgac ggtgatttct gaacaagtga ttaaagatca gggcgcaacc
     4261 aaccttaccg acgcgctcaa aaacgtcccc ggcgtgggtg cgttttttgc gggtgagaac
     4321 ggtaactcca ccactggcga cgccatttat atgcgtggtg ccgatacctc taacagtatt
     4381 tatattgatg gcattcgcga tatcggcagc gtctcgcgcg acaccttcaa taccgagcag
     4441 gtcgaagtga ttaaagggcc gtccggcacc gactacgggc acagcgcacc gacgggctca
     4501 atcaatatga tcagcaaaca gccgcgcaat gattccggca ttgacgcctc cgccagtatt
     4561 ggcagcgcct ggttccgccg cggcacgctg gacgtcaatc aggtcattgg tgataccacc
     4621 gcggtgcgcc tgaatgtaat gggcgaaaaa acgcacgatg ccggacgcga caaagtcaaa
     4681 aatgagcgtt acggcgtcgc cccttctgtc gcttttggcc ttggtacagc gaatcgtttg
     4741 tatcttaatt atctgcatgt cacccagcac aacacgccag acggcggcat tccgaccatc
     4801 ggtttgccgg gctattctgc cccatctgcg ggaacggcgg ccctgaatca ttccggaaaa
     4861 gttgatactc ataactttta cggcacggat tccgattacg acgattcgac caccgacacc
     4921 gccaccatgc gttttgagca cgacatcaac gataacacca ccattcgcaa tactacccgt
     4981 tggtcgcgcg taaagcagga ttacctgatg acggcgatta tgggcggggc gtcgaatatt
     5041 actcagccca ccagcgatgt gaatagctgg acctggtcac gcacggcgaa taccaaagat
     5101 gtgagtaata aaattctcac caaccagacc aacctgacct cgacgttcta taccggttct
     5161 atcggtcatg atgtcagtac cggcgtggaa tttacccgtg aaacgcagac taactacggc
     5221 gttaatccgg tgacgttacc cgcggtaaat atttatcatc ctgacagcag cattcatccc
     5281 ggcggcctga cgcgcaacgg cgcaaacgcc aatggtcaga cggatacctt cgcaatttac
     5341 gcctttgata cgctgcaaat cacccgtgat tttgagctga acggcgggat ccgtctggat
     5401 aattatcata ctgaatatga cagtgccacc gcctgcggcg gcagcggacg cggtgccatc
     5461 acctgcccag ctggtgtggc aaaaggttct ccggtcacca ccgtcgacac cgccaagtcg
     5521 ggcaatctgg tgaactggaa agccggggcg ctgtatcacc tgacggaaaa cggtaatgtc
     5581 tatattaact atgccgtttc ccagcagcct ccgggcggca acaacttcgc ccttgcgcag
     5641 tctggcagcg gtaacagtgc caaccgcacc gattttaaac cgcaaaaagc caacaccagc
     5701 gagattggca ccaaatggca ggttctggat aaacgcctgt tgctcaccgc cgcactgttc
     5761 cgtactgata tcgaaaatga agttgagcaa aatgatgacg gaacttactc gcaatacggt
     5821 aagaaacgtg tcgaaggcta tgagatatcc gtggccggga atatcactcc cgcgtggcag
     5881 gtgattggcg gctataccca gcaaaaagca accatcaaaa acggcaaaga tgttgcccag
     5941 gatggttcct catcgctgcc gtataccccg gagcacgcct tcaccttatg gagccagtat
     6001 caggcaaccg atgatatctc tgttggcgcg ggcgcacgct atatcggcag tatgcataaa
     6061 ggttcagacg gcgcggtggg aacgccagcg tttaccgaag gttactgggt cgccgatgcc
     6121 aaactggggt atcgggttaa tcgcaatctc gacttccagc taaacgttta cagcctgttt
     6181 gataccgatt acgtcgcctc aatcaacaag agcggctacc gttatcaccc gggcgagcca
     6241 agaaccttct tgctcacagc caatatgcat ttctgattca gatgtggggc gcaggcccca
     6301 ctttttggag aaattgtatg atgtaccaca ttcccggcgt gttatcgcca caggacgtcg
     6361 ctcgttttcg cgaacaactg gaacaagccg aatgggtgga tggacgcgtc accaccggcg
     6421 cacaaggtgc gcaagttaag aacaatcaac aggtagacac ccgcagcacg ttatacgccg
     6481 ccctgcaaaa tgaggtgctg aacgcggtta accaacatgc tttattcttt gccgcggcct
     6541 tgccgcgtac cctttccacg ccgctgttta atcgctatca gaacaatgaa acctatggtt
     6601 ttcatgtgga tggcgcagta cgcagccatc cacaaagcgg ctggatgcgc actgaccttt
     6661 ctgccacgct gtttttaagc gatccacaaa gctacgacgg cggcgaactg gtcgttaatg
     6721 acaccttcgg acaacatcgg gtaaaactcc cggcaggtga tctcgtgttg tatccctcca
     6781 gcagcctgca ttgcgtgaca cccgtaaccc gcggcgtacg agtggcatca tttatgtgga
     6841 tccagtcgat gatccgcgat gataaaaagc gcgccatgct gtttgaacta gacaaaaata
     6901 ttcagtcgct gaaaagccgc tatggtgaaa atgaagagat cctgtcgctg ctcaatcttt
     6961 atcataatct gctgcgggaa tggtcggaga tctgacgctt gaactgccca ggttcgtccc
     7021 tatattagct acacttaact gtacaagcat tgatatgggg aggacgatat ggcatccggt
     7081 tgggctaacg atgacgccgt caacgaacag atcaacagta caattgaaga tgcgattgcc
     7141 cgcgctcggg gtgaaattcc gcgtggcgaa agcctgtatg aatgtgaaga gtgcggtgcc
     7201 cccatcccgc aagcccgtcg ggaagccatt cctggcgtgc gcttatgtat tcattgtcag
     7261 caggagaaag atttacaaaa accagcgtat acaggatata atcgcagagg ttcgaaagac
     7321 agccagttac gttaactaca actggcgaga tgcatagcga gtataatttg tattttgcgt
     7381 ggcattccgt gcctttaacg ctgctgtgac tgccacgcgg cataaaacaa gtccataagt
     7441 acaacaaata aatggtttat cagtatgtta gatatcaatc aatttatttg aacaaggcgg
     7501 tcaattctct tcgattttat ctctcgaaaa aaaacgtgat actcatcaca tcgacgaaac
     7561 aacgtcactt atacaaaaat cacctgcgag agattaatta tatactgttg ttgctgctat
     7621 ggctctttca actctatcat ttggcgtgtt cgcggcggaa ccggtaacgg catcccaggc
     7681 acagaacatg aataaaatcg gcgtggtttc tgccgatggc gcatcccccc tcgatgccct
     7741 ggaagcgaaa ctggctgaga aagccgcggc agccggtgcc agtggataca gcatcacttc
     7801 tgccaccaac aacaataaat taagcggtac tgcggtaatt tataagtaat tcgtaggaca
     7861 gataaggcgt ttacgccgca tccggcaaca gatgcctgat gcgacgctac cgcgtcttat
     7921 caggcctaca aaatccgaac cgttggacgg atcaggcggt tacgctacgt ccagcacaag
     7981 tatttccctg tctgtttgcc gacagacgca tatgctctaa ccctcattga tcctatatta
     8041 cccttgtttg cccgtccgtt actggacggg ctttttttag ctggctaact gctgacagaa
     8101 agcctgtaac gtctcttccg acataccaat ctgccgcgcc gcatcacaaa tggcctgcca
     8161 gcttcccgca tccaatggaa tcccctgctc ctgccgttcg cgacgcgtgt tcacttccca
     8221 ctcgcccggt agcaaaatcg gcttatcgtc atcatgcggc gaggctttca cccactcggc
     8281 aaaggcttca gtctgcgcgc tacaatccgg cgcgccgaac agttccgggt tgatgatgat
     8341 agtggtcatg cagttaagaa tggcatcggg actggtttgt aacgtttcct gatgcgtcgt
     8401 tttaccgcca gaaagcgccc cgccaagaat ttcacacatc gctgcaaggg cgtagccttt
     8461 atgttcggca aaggtcaaca gcgaccccaa cggcgactcc tgcattaccg ccggattggt
     8521 cgtcggcacg ccgttaacgt caatcaggca acctggcggc acggggacgc ctttatgcta
     8581 ggcgacgcga gttttaccaa atgcgatggc gctggtggcg taatcaagca acagcgggaa
     8641 attatcttta cgagggaaaa ccacacagaa cggattggtg ccaaagcggc tgtcgcgacc
     8701 gtggaacggt gcgaccattg gaataccgac cacgctaaca aagtggatag agacaaaccc
     8761 cgccgctgca cactgctccg cccagtaacc gatacggccg atatgatgcg agttatgtag
     8821 cgccacggca gcaataccgt gctgatgcgc tttctcaatc cccagcgcca tcgcttcgtg
     8881 tgccgcgacc tgaccgaatg cgcgatcgcc atcgagcgtg actgccgccc ccgcctcttt
     8941 aacgattttg gcatgatggt taatttgcag atgcccctga ctccaggaac gcacatagct
     9001 tgggatcatg ccaataccat gagaatcatg ccctgctagg tttgccgcga ttaaatgatc
     9061 ggccactaat ttcgcttctt gttcctcgct acccatctga cgaaatacag cctgaataaa
     9121 actgtgcagc gtctgagcat caaagcgatg accactttcc atggttaact cctgtttatg
     9181 ttatgtgttt gttgtttttt tatgctgcac gccgggcgcg ggaaggtcaa taaagatgca
     9241 ggaatttcat attgcggtgg ggtaaaagcc ggatgacatg gctcatccgg ctgagaaaag
     9301 aattaaaatg cctgattaac gcgcgccagg ccgtcgctga tagttgccgc ttcacccgta
     9361 gcctccaggc agcaagccat ctggattttc agcgattcgg gaatcggttc gctgccagca
     9421 aggcaacgct caatccactg cgccgtggtt tctgggtctt ttgcttgtgg cagtaactcg
     9481 ctaccagcag tgtcctgttt ttcatacagc acccgcatcc cttcacggtc aatgagattg
     9541 atctgcgggc agcgctgcgg attagcatac acttcgcctt cagtaccatg cattagtagc
     9601 gcccgcccgc cgatatcgct aaagaacttc gcgactcgcc cgatgtattc cggatgcgaa
     9661 acgctggaaa gacgcagcgc ctcaccttcg gcaaatggcg tcgccagttt cgccagggta
     9721 tgtgcactgt tacgcacgcc catccgccag cgcatcgcca gttgtttttc cagcggcggg
     9781 caaaacgcgc cgacaggcat aaacaccggt tgatgttcgt cgagcttcgc ctgcgcctgc
     9841 ccgccgtgca acgttggtgt aatacccatc agttcgaaaa tggtttctgt cagcacgcga
     9901 gttggatctt cgctaacccc ttgaaccacc acaggaaaac cgagtttgtg caggagaata
     9961 gccaacaacg gcgtcaggtt ggcctgttta cgcgcgccgt tgtaactggg gatgacaatc
    10021 ggcatcggct tgcctgcagg cggcgtcagc ttgatggtgt gattttgcat ggcttcgtaa
    10081 aagccgagca tctctgcttc cccttcccct ttgatacgta gcgcaatcaa tacgccgccc
    10141 aactcaaggt cagggacttc accattgagc atatgggcat acagaccgcg cgcagtatcc
    10201 cggtctaaat cgcgcgcgtg gtttttcccg cgcccgatct ctttaatgat tttgcgatag
    10261 tccatttacg actccttacc tgactcacat cattaacgcc gccgacggcg tggggatttc
    10321 gttttttctt tctttttaac tataccttca gggacttccg gttgctctat cggaaatacc
    10381 ggtaatgcat ccagtagtcg cttgccataa tttttggtca gcaagcgttt gtcgtagata
    10441 accacttcgc cccagcaacc gtggcttcga atcagtcgcc caacctgctg aatcaggtta
    10501 aacgaggcgc tcggcaggct ttgcacctca aacggatagc ggttgaggct tttcagccat
    10561 tccccttcgg tgatcaccac cgggctgtcg atgggcggaa aagcgatttt gtggatatgc
    10621 acctggctga gcagatcacc tttcaaatca agcccttcgg caaatgactg taagcccacc
    10681 agcacactac gctcaccgtt ggcaacgcgt ttgcggtgca gttcaactaa gcgataacgc
    10741 ggctgatcgc tctgcaccag cagcatcagg cgtaaatccg tcacatagtc gagaaagcgc
    10801 tgcatcgccc gtccgctggc aaacagtacc aacataccga gatgtttttt gctctccacc
    10861 tgctcacgga aaaaggccgc catttcggca atatgctgct cttcgttgtc gatggaaggc
    10921 tcaaagcgca tccggggaat aacaattttg ccctgttcgc agtggttaaa gggggaatcc
    10981 agcgccacaa aacggtcgcc cgctttctct ttcagcccgc tcatctcctg caaacgcgaa
    11041 aaactgttca gcgaacgcaa ggttgcggag gtgacaataa tgtgcggaat actgcgccac
    11101 agcagccttt ccagctgatc gctgacacgt attcccacgc agtgaaacca gagatgcagc
    11161 tgcccttcgc gctcttcccg cgtcgcccat ttggtcaccg gcgcaccgga agattgcgcc
    11221 agagacgcca gccgccagag tttgctttgc gcctcgaaca tccccaacgc gcggttcatc
    11281 tgcaaaatca accgatgcag acgcacaata tcgtggctgc cggttttctc acttaaatcg
    11341 ttaagaaata actccgccag accacgcagc atctcggtga gttttgccag ccgctggcag
    11401 atctccagca cttcatcagg cagttcgccc atcgcaaaac ggtgctctgc ctcctgcccg
    11461 gcaggcatgt agagattgag aatgttgttt aacgaggcga taagctcata caactcttca
    11521 caatgcgcat tcaaacgttc agggatcgcc agcggtggga tggtcttcgg gcgaaactgc
    11581 tccatgcagg tagcgaccag tttcgtgaac aagtccagct gtagtcgata ccagggcgcg
    11641 gtgatttcag cgctcatctc cagcgcatcc cgggccacat ctggcaggtg atgaccttcg
    11701 tccagcacca gcagcagatt tttcgggtca ggcagtacgg cttcgctttc catcgccgcc
    11761 atcaccagcg catggtttgc caccaccact tccgcttcct gaatctcccg acgagcaaca
    11821 aaaaacgggc attcacgata gtagtaacag ttacggttga agcagctggc tttgtcggta
    11881 ctcaaacgac gccagagatc atcatctata gcgatatccg tatgatcgcg cagaccatcc
    11941 catttataag tgtcgagatc gcccttcagc ttcgcacaac gtttttgctc ttcctgatta
    12001 tttggcgtca gttcgtcgtc aagaaacgcc agcagatcct gttgcgtggg ttcagtgctg
    12061 gcgagcgccg tcagattacg cggacaaacg tagcgcccac gcccgaaagc ggcagtgaat
    12121 ttaagatcgg gaatgatctt tttcagcagc ggtaaatctt tgctgtaaat ctgatcctgc
    12181 aacgccacgt tggcggtact caccaccagc gttttttgct cttcgcgggc aatggcgatg
    12241 ccggggatca aataggagag cgttttccca acgccggtgg gggcttcaat cgccagatgc
    12301 cgcccttctt ctccggccag cgttttggcg acgtccgcaa tcatctgccg ctgcggcgca
    12361 cggggaataa agtcggggat ctgttcctga agcgccttat acccggcggc aatttgcgct
    12421 ttaagcgcgg cggttaatgc catgagaaaa cctgaaatac tgtataaaca gccaatattg
    12481 tggcattttt cggttttcag gggtaatggt ttttctgttt ctggaaagcg gctcgcaata
    12541 accaccaaca taatgcggtt taatgcccgt tcgagcacaa aggatccaac acgtcatgca
    12601 agacaccatc ataaatttct acagcaccag cgatgactac ggtgattttt ctaactttgc
    12661 cgcctggccc atcaaggttg acgggaaaac ctggcccacc tccgaacact attttcaggc
    12721 acaaaaattc cttgatgaaa aataccgcga agagatccgt cgggtttctt cccccatggt
    12781 cgccgctcgc atggggcgta atcgttccaa gccacttcgt aaaaactggg agtcggttaa
    12841 agaacaggtg atgcgtaaag cacttcgtgc taaattcgaa cagcatgcag aactgcgtgc
    12901 gctcttgctg gcaaccgcgc ccgcaaaact ggttgagcat acggaaaacg atgcttactg
    12961 gggagacggt ggtaatggta agggcaagaa tcgactgggc taccttttaa tggagttgcg
    13021 cgaacaattg gctatagaga agtaacgtct cggtggctta tgggcggtaa aacagataaa
    13081 ttttttcccg tgttctcaaa ttgctgacaa gtgcttgttg tgaaatgccg gatgcggcgt
    13141 aaacgcctta tccggcctac aaaagcatgc aaattcaata tattgcagag ttaacgtagg
    13201 cctgataagc gtagcgcatc aggcagtttt gcgtttgttc atcagcctga tgccgggcat
    13261 agcccggcat aaaagattac tgcgcagcgg caggtttacg cggacggcgg cgacgttgtt
    13321 gttcgcctgc cggtttggca tcgccgaggc ggcgagacgg tttttctgca ggtttcgcgc
    13381 ttgcagattt tgcgccacct tccccacggc gtggttgctg ttgaccgcga ccaccacctt
    13441 gcccacgacc gccgccgcca cgttgctggc gaccgttctg gatcggttcg gctttgattg
    13501 acgggtccgg ctcatagccc ggaatcgcaa tgcgcgggat ctcttttttc agcagttttt
    13561 cgatatcacg cagcagtttg tgttcatcaa cacacaccag cgacaacgct tcaccggtag
    13621 cagccgcacg accggtacgc ccgatacggt ggacataatc ttccggtacg tttggcagtt
    13681 catagttgac gacgtgcggc aactcttcga tatccagacc gcgcgcagcg atatcggtcg
    13741 ccaccagtac gcgaatgtca ctcgatttaa aatcagccag cgcacgggta cgcgcacctt
    13801 gcgatttatt cccgtggatc gccgcactac ggatgccatc tttattgagc tgctcagcca
    13861 gatggttagc gccgtgtttg gtacgggtaa acaccagcac ctgctgccag ttccctttac
    13921 caatcatgtg cgacagcaat tcgcgtttgc gtttcttatc gacaaagtga acgtgctggg
    13981 tcacctgatc agacgcggta ttgcggcgtg ccacttcgat ttccagcggg ttgtgcaaca
    14041 gtttttccgc cagggcttta atatcgtcag agaaggtcgc agagaacagc aggttctggc
    14101 gtttcgctgg cagttttgtt aacacgcgac ggatatcgtg gataaagccc atgtcgagca
    14161 tgcggtcagc ttcatcgagg acgaggattt caacctgatc cagcttcact gcattttgat
    14221 gttccaggtc cagcaaacgt cccggtgttg ccaccagaac atcaacgccg ccgcgcagct
    14281 tcatcatttg cgggttaatg ctgacaccgc caaacaccac cagcgaacga atgttcaaat
    14341 atttgctgta atcacggaca ttttcgccaa tctgcgcagc cagttcacgg gtcggggtaa
    14401 gaatgagcgc acgtaccgga cgacgccctt tggcgtgcgg ctggcgagtg atcaggtgtt
    14461 gcaacagcgg cagcgtaaag cccgctgttt taccggtacc ggtctgggcg ctagccatca
    14521 ggtcgcggcc ttccagcacc gcagggatcg cctgctgctg aataggggtg ggttcacggt
    14581 aaccctgctc ggcaacggcg cgcaggatat cagggcttaa acccaaagaa tcgaaagaca
    14641 taactactcc gaaccgcccc gaccgttacc ggtgtagttt tcagggagat actgaaaagg
    14701 aaaatgacaa aaaccacaat gtcatgaggg agcggagtgt agcagttttt gtgacgcagc
    14761 gcataaatta tccctgtgac tggcgttgct aaaattctta gccatactgg acaactcccc
    14821 tatggagtca taatcttaat caatcatttg attaagaatg gactgtgcga tgaataatcc
    14881 tgccatgaca atcaagggtg aacaggcgaa aaaacagctg attgctgccg cactggcgca
    14941 gtttggtgaa tatggaatga acaccaccac tcgcgagata gccgcccagg ccgggcagaa
    15001 tatcgctgcc atcacctact acttcggttc gaaagaagat ttgtacctcg cctgcgccca
    15061 gtggattgcc gattttattg gcgagcagtt ccgtccgcat gccgaggaag ccgaacgctt
    15121 gttcgcgcaa ccacagcctg atcgggctgc catccgtgaa ctgatccttc gcgcctgcag
    15181 gaacatgatt aagctgctca cccaggatga caccgtcaac ctcagcaagt ttatctcccg
    15241 tgagcagctc tctcccacgg cagcctacca cctggtgcac gaacaggtga ttagtccgct
    15301 acacagccac ctgacacgcc tgattgccgc ctggaccggc tgcgacgcca atgacacccg
    15361 catgatcctt catacccatg cgttgattgg tgagattctg gcgttccgtc ttggcaaaga
    15421 aacaattctg ttacgtaccg gctggaccgc gttcgatgaa gaaaagaccg aactgatcaa
    15481 ccagacggtg acctgtcata tcgacctgat tttgcaagga ttatcgcaaa ggagtttgta
    15541 gtgatgaaaa aacctgtcgt gatcggactg gcggtagtgg tacttgccgc cgtggttgcc
    15601 ggaggctact ggtggtatca aagccgccag gataacggcc tgaagctgta tggcaacgtg
    15661 gatattcgta cggtgaatct tagtttccgt gttggggggc gcgttgaatc gctggcggtg
    15721 gacgaaggtg atgcgatcaa agcgggccag gtgctgggcg aactggatca caagccgtat
    15781 gagattgccc tgatgcaggt gaaagcgggc gtctcggtgg cacaggcgca gtatgacctg
    15841 atgcttgccg ggtatcgcga tgaagaaatc gctcaggccg ccgcagcggt gaaacaggcg
    15901 caagccgcct atgactatgc gcagaacttc tataaccgcc agcaaggact gtggaaaagc
    15961 cgcaccattt cggcaaatga cctggaaaat gcccgctcct cgcgcgacca ggcacaggca
    16021 acgctgaaat cagcacagga taaattgcgt cagtaccgtt ccggtaaccg tgaacaggac
    16081 atcgctcagg cgaaagccag cctcgaacag gcgcaggcgc aactggcgca ggcggagctg
    16141 aatttacagg actcaacgtt gatagcaccg tctgatggca cactgttaac gcgcgcggtg
    16201 gagccaggca cggttctcaa tgaaggtggc acggtgttta ccgtttcact aacgcgtccg
    16261 gtgtgggtgc gcgcttatgt tgatgaacgg aatcttgacc aggcccagcc ggggcgcaaa
    16321 gtgctgcttt ataccgatgg tcgcccggac aagccgtatc acgggcagat tggtttcgtt
    16381 tcgccgactg ctgaatttac cccgaaaacc gtcgaaacac cggatctgcg taccgacctc
    16441 gtctatcgcc tgcgtattgt ggtgaccgac gccgatgatg cgttacgcca gggaatgccg
    16501 gtgacggtgc aattcggtaa cgaggcagga catgaatgat gccgttatca cgctgaacgg
    16561 cctggaaaaa cgctttccgg gcatggacaa gcccgccgtc gcgccgctcg attgtaccat
    16621 tcacgccggt tatgtgacgg ggctggtggg gccggatggt gcaggtaaaa ccacgctaat
    16681 gcggatgctg gcgggattac tgaaacccga cagcggcaat gccacgatga ttggctttga
    16741 tccaatcaaa aacgacggcg cgctgcacgc cgtgctcggc tatatgccgc agaaatttgg
    16801 tctgtatgaa gatctcacgg tgatggagaa cctcaatctg tacgcggatt tgcgcagcgt
    16861 caccgacgag gcacgtaagc aaacttttgc tcgcctgctg gagtttacgt ctcttgggcc
    16921 gtttaccgga cgcctggcgg gcaagctctc cggtgggatg aaacaaaaac tcggtctggc
    16981 ctgtaccctg gtgggcgaac cgaaagtgtt gctgctcgat gaacccggcg tcggcgttga
    17041 ccctatctca cggcgcgaac tgtggcagat ggtgcatgag ctggcaggcg aagggatgtt
    17101 aatcctctgg agtacctcgt atctcgacga agccgagcag tgccgtgacg tgttactgat
    17161 gaatgaaggc gagttgctgt atcaggggga accaaaagcc ctgacacaaa ccatggccgg
    17221 acgcagcttt ctgatgacca gtccacacga gggcaaccgc aaactgttgc aacgcgcctt
    17281 gaaactgcca caggtcagcg acggcatgat tcaggggaaa tcggtacgtc tgatcctcaa
    17341 aaaagaggcc acaccagacg atattcgcca tgccgacggg atgccggaaa tcaacatcaa
    17401 cgaaactacg ccgcgttttg aagatgcatt tattgatttg ctgggtggtg ccggaacctc
    17461 agaatcgccg ctgggtgcaa tattgcatac ggtagaaggc acacccggcg agacggtgat
    17521 cgaagcgaaa gaactgacca agaaatttgg tgattttgcc gccaccgatc acgtcaactt
    17581 tgccgttaaa cgtggggaga tttttggttt gctggggcca aacggcgcgg gtaaatcgac
    17641 cacctttaag atgatgtgcg gtttgctggt gccgacttcc ggccaggcgc tggtgctggg
    17701 gatggatctg aaagagagtt ccggtaaagc gcgccagcat ctcggctata tggcgcaaaa
    17761 attttcgctc tacggcaacc tgacggtcga acagaattta cgctttttct ctggtgtgta
    17821 tggcttacgc ggtcgggcgc agaacgaaaa aatctcccgt atgagcgagg catttggcct
    17881 gaaaagtatc gcctcccacg cgaccgatga actgccatta ggttttaaac agcggctggc
    17941 gctggcctgt tcgctgatgc atgaaccgga cattctgttt ctcgacgaac caacgtccgg
    18001 cgttgatccc ctcacccgcc gcgaattttg gctgcatatc aacagcatgg tagagaaagg
    18061 cgtcacggtg atggtcacca ctcactttat ggatgaagca gaatattgcg accgcatcgg
    18121 cctggtgtac cgtgggaaat taattgccag cggcacgccg gatgatttga aagcgcagtc
    18181 ggccaacgac gagcaacccg atcccaccat ggagcaagcc tttattcagt tgatccacga
    18241 ctgggataag gagcatagca atgagtaacc cgatcctgtc ctggcgtcgc gtacgggcgc
    18301 tgtgcgttaa agagacgcgg cagatcgttc gcgatccgag tagctggctg attgcggtag
    18361 tgatcccgct gctactgctg tttatttttg gttacggcat taacctcgac tccagcaagc
    18421 tgcgggtcgg gattttactg gaacagcgta gcgaagcgac gctggatttc acccacacca
    18481 tgaccggttc gccctacatc gacgccacca tcagcgataa ccgtcaggaa ctgatcgcca
    18541 aaatgcaggc ggggaaaatt cgcggtctgg tggttattcc ggtggatttt gcggaacaga
    18601 tggagcgcgc caacgccacc gcaccgattc aggtgatcac cgacggcagt gagccgaata
    18661 ccgctaactt tgtacagggg tatgtcgaag ggatctggca gatctggcaa atgcagcgag
    18721 cggaggacaa cgggcagact tttgaaccgc ttattgatgt acaaacccgc tactggttta
    18781 acccggcggc gattagccag cacttcatta tccccggtgc ggtgaccatt atcatgacgg
    18841 tcatcggcgc gattctcacc tcgctggtgg tggcgcgaga atgggaacgc ggcaccatgg
    18901 aggctctgct ctctacggag attacccgca cggaactgct gctgtgtaag ctgatccctt
    18961 attactttct cgggatgctg gcgatgttgc tgtgtatgct ggtgtcagtg tttattctcg
    19021 gcgtgccgta tcgcgggtcg ctgctgattc tgttttttat ctccagcctg tttttactca
    19081 gtaccctggg gatggggctg ctgatttcca cgattacccg caaccagttc aatgccgctc
    19141 aggtcgccct gaacgccgct tttctgccgt cgattatgct ttccggcttt atttttcaga
    19201 tcgacagtat gcccgcggtg atccgcgcgg tgacgtacat tattcccgct cgttatttcg
    19261 tcagcaccct gcaaagcctg ttcctcgccg ggaatattcc agtggtgctg gtggtaaacg
    19321 tgctattttt gatcgcttcg gcggtgatgt ttatcggcct gacgtggctg aaaaccaaac
    19381 gtcggctgga ttagggagaa gagcatgttt catcgcttat ggacgttaat ccgcaaagag
    19441 ttgcagtcgc tgctgcgcga accgcaaacc cgcgcgattc tgattttacc tgtgcttatt
    19501 caggtgattc tgttcccgtt cgccgccacg ctggaagtga ctaacgccac catcgccatc
    19561 tacgatgaag ataacggcga gcattcggtg gagctgaccc aacgttttgc ccgcgccagc
    19621 gcctttactc atgtgctgct gctgaaaagc ccacaggaga tccgcccaac catcgacaca
    19681 caaaaggcgt tactcctggt gcgtttcccg gctgacttct cgcgcaaact ggataccttc
    19741 cagaccgcgc cgttgcagtt gatcctcgac gggcgtaact ccaacagtgc gcaaattgcc
    19801 gccaactacc tgcaacagat cgtcaaaaat tatcagcagg agctgctgga aggaaaaccg
    19861 aaacctaaca acagcgagct ggtggtacgc aactggtata acccgaatct cgactacaaa
    19921 tggtttgtgg tgccgtcact gatcgccatg atcaccacta tcggcgtaat gatcgtcact
    19981 tcactttccg tcgcccgcga acgtgaacaa ggtacgctcg atcagctact ggtttcgccg
    20041 ctcaccacct ggcagatctt catcggcaaa gccgtaccgg cgttaattgt cgccaccttc
    20101 caggccacca ttgtgctggc gattggtatc tgggcgtatc aaatcccctt cgccggatcg
    20161 ctggcgctgt tctactttac gatggtgatt tacggtttat cgctggtggg attcggtctg
    20221 ttgatttcat cactctgctc gacacaacag caggcgttta tcggcgtgtt tgtctttatg
    20281 atgcccgcca ttctcctttc cggttacgtt tcgccggtgg aaaacatgcc agtatggctg
    20341 caaaacctga cgtggattaa ccctattcgc cactttacgg acattaccaa gcagatttat
    20401 ttgaaggatg cgagtctgga tattgtgtgg aatagtttgt ggccgctact ggtgataacg
    20461 gccacgacag ggtcagcggc gtacgcgatg tttagacgta aggtgatgta acttcttatc
    20521 tttcgccagc aaagacacta ccgccgggcc ggcaaggatt gccagccctg caattgccag
    20581 caaaaagttg ttttccagta cgcgggacaa cagccacagc acaatcagcg ctgcgccaaa
    20641 ataccaggtc gtggtcagct cttccagcac gtctgccacc tcacgccagc gttgctcggg
    20701 gtggcgctga aacaccaaca tcatcactac cgtgacacaa tacagtgcgc ataatcccac
    20761 gccgacgtga accagagtct tactcatcca gcccaccacc agcagcgcca ctaccagtaa
    20821 atgcaacata atctgccagc aacttagacc cgttgcgaca cgaacacgtt gttgccactt
    20881 catggcttct ctcctgaaga atttatctct acttactcag agtaccgaac tttacggaaa
    20941 attccgtaag accgcacctt tttgtgacgc cgactacact atttcaatga gataagaggc
    21001 aaagacagga aaattatgcc cgatcaaaca caacaatttt cgttcaaggt gctcaccatc
    21061 aacattcaaa aaggttttac cgcgtttaac cgacgcttca ttttgccgga acttcgcgac
    21121 gcggtgcgta ccgtcagcgc cgatattgtt tgcctgcagg aagtgatggg cgcgcacgaa
    21181 gttcatccgc tgcatgtgga aaactggccc gatacctcgc actacgagtt tctcgccgac
    21241 actatgtgcc gcgattttgc ctacggtcgc aatgccgtat acccggaagg gcatcacggc
    21301 aacgccgtac tgtcgcgtta tcccattgaa cattatgaga atcgcgatgt ttcggtcgat
    21361 ggtgcggaaa agcgcggcgt gctctactgc cgcattgtgc cgccgatgac cggaaaagcg
    21421 attcatgtga tgtgcgtaca tctgggcctg cgtgaggcgc accgtcaggc gcagcttgcg
    21481 atgctcgccg aatgggtgaa tgagctaccg gacggcgaac cggtattggt ggcgggtgat
    21541 ttcaatgact ggcggcaaaa agctaatcat ccgttaaaag tgcaggccgg actggatgag
    21601 atttttaccc gcgcccacgg acgcccagcg cgcacgtttc cggtgcaatt tcctctacta
    21661 cgactggaca ggatctacgt caaaaatgcc agcgccagcg cgccaaccgc gttgccgctg
    21721 cggacatggc gacacctttc tgatcatgcc cctttaagtg cggagattca tttatgaaat
    21781 gtagctggcg cgaaggcaat aagatccagt tgctggaaaa cggcgagcaa tattatcccg
    21841 cggtgtttaa ggcgattggc gaggcacaag aacgcatcat tcttgaaacg tttatctggt
    21901 ttgaggataa cgtcggcaaa cagctacatg cggcactact ggcagcagcg caacgcgggg
    21961 ttaaagcgga agtcttgctg gatggctacg gttcgccgga tctcagcgat gagtttgtca
    22021 ataaactgac ggcagctggc gtagtgttcc gctactacga tccccgccct cgcctttttg
    22081 gtatgcgcac caatgtgttt cgccggatgc atcgcaaaat tgtggtgatc gacgcgcgta
    22141 tcgcctttat tggcgggctg aattactccg ccgagcatat gtccagctac ggtccagagg
    22201 ctaaacagga ttacgcggta cgccttgaag ggccgattgt caaagatatt ctccagtttg
    22261 agctggaaaa cctgcctgga cagagcgcgg cacggcgctg gtggcgacgt catcacaaag
    22321 cggaagagaa ccgccagccg ggagaagcgc aggtattgct ggtctggcgc gataacgaag
    22381 aacatcgcga tgatattgaa cgccattatc tgaaaatgct cactcaggcg cggcgggaag
    22441 tgattatcgc caacgcctac ttcttccccg gctatcgatt tttacacgcc ttgcgtaaag
    22501 cggcacggcg cggggtgcgg atcaaactga tcattcaggg cgaaccggat atgccgattg
    22561 tcagagtcgg tgcgcgcttg ctgtataact atctggttaa aggcggcgtt caggtttttg
    22621 agtaccgccg ccgcccgctc cacggcaaag tggcattgat ggacgatcac tgggcgacag
    22681 tagggtccag taatctcgat ccgctcagtt tgtcactgaa tctcgaagca aatgtcatca
    22741 tccacgatcg tcattttaac cagacgctgc gcgataatct gaacggcatt attgccgcag
    22801 attgtcagca ggtggatgaa accatgctgc ccaaacgcac ctggtggaac ctgaccaaaa
    22861 gcgtgctggc gttccacttt ttacgccact tcccggcgct ggttggctgg catccggcac
    22921 acacaccacg tctgacgcag gttgatcccc ccgcacaacc gacaatggaa acgcaggatc
    22981 gggtagaaac tgaaaacacg ggggtaaaac cctgatgagt aaatcacacc cgcgctggcg
    23041 cttagcaaag aagatcctca cctggctgtt ttttatcgcg gtgattgtgt tgctggtggt
    23101 ctacgccaaa aaagtggact gggaagaggt ctggaaggtc atccgcgact acaatcgcgt
    23161 tgcgctgctt agtgcggtcg ggctggtggt cgtcagctat ctgatttacg gctgctatga
    23221 cctgctcgcc cgcttttact gcggtcacaa actggcgaag cgccaggtga tgctggtgtc
    23281 gtttatctgc tacgccttca acctgacgct cagtacctag gtcggcggca ttggtatgcg
    23341 ctatcgtttg tactcccgac tagggttacc gggcagcact attacgcgga ttttctcgct
    23401 cagtattacc accaactggc tgggctatat tttactggca gggattatct ttaccgcagg
    23461 cgtggtggag ttgccggatc actggtatgt cgctcaaact acgctgcgta ttctcggcat
    23521 tggcttactg atgattatcg cggtttattt gtggttttgc gctttcgcga agcaccgcca
    23581 tatgaccatc aaagggcaaa agctggtgct gccttcatgg aaattcgccc tcactcagat
    23641 gctgatttcc agcgttaact ggatggtaat gggggcgatt atctggctgt tacttggtca
    23701 aagcgtgaac tatttctttg tactgggcgt gttactggtt agtagtattg ctggcgtcat
    23761 cgtgcatatt ccggcgggga tcggtgtgct ggaagcggtg tttatcgcac tactggctgg
    23821 ggagcatacc tcgaaaggga gcattatcgc cgcgctgctc gcttatcgcg tcctgtatta
    23881 ctttatcccg ctgctgctgg cgctgatctg ttacctgcta ctggaaagcc aggcgaagaa
    23941 gctacgggcg aaaaatgaag cggcgatgtg aagtttagtt aagttcttta gtatctgcat
    24001 tcacgactaa tgaaaaaaac gcgtatgcct ttgccagaca agcgttatag ctatcgcggc
    24061 aagtatccca aagaagccga taaaatagta atagagtgtt aatgcacctg taaaagcgca
    24121 acgaaccgga ctccacaact cttcactatg gcattttcct gccagttcaa ggagcttatt
    24181 tcgtccatgc gagataatgc ctggccataa cacaatcact aagcaactta ttacccaaat
    24241 gggccgttca ctcattaatg ccgcattcac gatgattacc agggccaacc ctgtcaacgt
    24301 catcataatg ataaaacggt gagaaccagg atcaacatta aataataaac cggccagcat
    24361 actgattaaa aacatcgcgc ccgcagtgct gaacacaatg ataatggcat atacaggaac
    24421 taaacttgca acgacaatcg ccaccaaaga gagtaaaaac agatatatta cgcctgcgat
    24481 gacggcattt atcttgttga tatccttact taagccatac atacaaacta ataataaccc
    24541 tatggcgaca tacattgttg gtgaatcata tttggttgcc gtaatttcga gatacttagc
    24601 tccccaggcc agtcctgcgg ttgccaccaa acctaaagcg gtaatgagcc atataccgtt
    24661 taatatcctg gtctcgtgct gaaaatctaa tttattgctg ttttgtgagt atgattccat
    24721 tcttttagtt gtccttagaa aaaatattaa tattcaccat caataaattt aaacccacgc
    24781 atacaaaata cttttgtatt tatggatacg gaaaacgctt ccgctcggcc ataaggcgta
    24841 ttttatacct ggtacttgtt aagtgtcgtt tttagtaaga aaagaaatcc cgacacatgg
    24901 ccgggatatt gatggtgaaa aagaattaac ggcggttgcc aaaaattcgc agcaacatca
    24961 ggaacaggtt gatgaagtcc agatacaagg ttaacgcgcc aagaatggaa tatttgcgca
    25021 ggttcgacgt gtcgcgggta tcaatctgct cacccatatt tttcaatttc tgagtgtcat
    25081 acgccgtcaa tccgacaaag acaatcacgc cgatgtaggt aactgcccac atcaatgctt
    25141 cgcttttcag ccagaagttg accagcgatg ccagcacaat gccgattaac gccataaaca
    25201 gcatattgcc aaagccactt aaatcgcgct tcgtggtgta accgtacagg ctcattgcgc
    25261 cgaacatccc ggcagtaacg acgaaagtac tggcgataga agcagcggta tagacaatga
    25321 atatactgga aagcgtaaga cccgtcagcg ccgaataaag cataaagagc atcgtcgtta
    25381 cacctgcgct cagcttttga atcatcgctg ataacacaat aaccaatgct aattgcgcga
    25441 tgatcagacc gattaaaaag acacggttag tgaacaacag ctccatcacg gccgcggaat
    25501 tagccgcata ccaggcaaca aatgcggtca gcaacaagcc aacggtcatc cagccataga
    25561 cttgcgccat ataagtttgc aagccagccc ggggttgtac gattgaatca gaacgtggga
    25621 atctgtccat gacgatctcc tgaagatata aggaatatct taaggatact gcaaaatgat
    25681 gaggctgtgc atcgacgcag cgtaaacgca tgtactgagc ggtgaaattg ccggacgcag
    25741 cggtgcctta tccggctaac aaaaaactac cagcgttttg ccgcctgctg atcgctctcc
    25801 cgagcttcaa cccagcggtc gccttccggc gtggcttcgc gcttccagaa cggtgcgcgg
    25861 gttttgagat aatccataat aaactgcccg gcttcaaacg cactgctgcg atgcgcactg
    25921 gtgacaccga caaaaacgat ttcatcgccc ggccataatt ccccgatgcg gtgaatcgca
    25981 gtgacgcgcc ccagcggcca gcggttacgc gcttcatcaa caatttctgc cagtgctttt
    26041 tcagtcatcc ccggatagtg ttcgagggtt aatgctttga cgctgtcgcc caggttatgg
    26101 ttgcgcacct taccagtaaa ggtgactacc gcaccgtctt cgtcacgctc cgccagccac
    26161 gggtactctt ctcctacgct gaacggctgc ggaccaacaa caattttggt ttctgccatc
    26221 ttaacctccg gttaccggcg ggaagaaagc tacttcgtcg ccgtcagtca gcggatggtc
    26281 aaaactcacc agcgtctggt tgacggcagc cagtaatttg ccatcttcca gcgccagcgc
    26341 ccagcgatcg ctctgcgcag ccatgtgctg gcgtaacgct tcaacagttg ggaaatccgc
    26401 agccacttcg gttgcatctg ttcccaccaa ctcgcgcacc tgcgcgaaaa aaagaacttt
    26461 aatcatccgc ttccacctta aagtcacccg acttgccgcc gctcttcgcc agcaaacgta
    26521 ccggaccaat caccatatct ttttgcaccg ctttgcacat gtcataaatg gtcagcgccg
    26581 ccacggaggc cgcggttaat gcttccattt cgacaccggt tttcccggtc aggcggcata
    26641 aggtttctat acgcacccga ttgtgctccg gctcggcctg taaattgact tcaactttgc
    26701 tgagcatcag cggatgacag agcgggatca gatcccaggt gcgttttgcc gcctgaatac
    26761 cggcaatacg cgcagtggca aatacgtcgc ctttgtggtg gcgaccatca ataatcatcg
    26821 ccagcgtctc gctgcgcatg gtgacaaagg cttccgcccg cgcttcacgc acggtttccg
    26881 ctttggcgga gacatccacc atgtgcgctt cgccagcggc gttgatatgg gtcagttgcg
    26941 acatacttat ttcttcaaat gtggatggaa attacacgga cgcgtacggg catccagctg
    27001 cggcgcgatg atattttccc atgcggtacg gcacgctttg gtcgaacccg gcatggcgaa
    27061 aatcagcgtt ttgttggcga cgcccgctac cgcacgagat tgcaacgtgg aagtgccaat
    27121 ctcttcaaac gacaacatcc ggaacacttc accaaaacct tcaacttcac ggtcgaacaa
    27181 cggcagcaat gcttcgggag cctgatcacc ttccgtcagg ccagtaccac ccgtaatcaa
    27241 taccacttgt acatcgtcgc tggcgatcca cgcagatacc tgagcgcgaa tagcgtagcg
    27301 gttttctttc acaatggctt tatcgacaac gtgatggccc gcttcttgcg ccgaatcgcg
    27361 cagatagtga ccggaggtat cgtcttcttc accgcgacga ttagaaaccg taagaatagc
    27421 aatacgggtc gggataaatt cagtgcttac ctgactcatc tgatctctcc ttttgacgtt
    27481 ttagccgcca atgtacgata agttttgcgt aataccggtg ttgttttgat gcaggaaatg
    27541 ggtctgtttc ttctcccgca gcgccactga aatacgcgct tccagcgcct gttgctgggt
    27601 atcgtcttcc agcagatcgc gcaggttaac gccgccttca ccaaacaggc agagatagag
    27661 tttaccaatg gaggaaacgc gcaggcggtt gcaagtggcg cagaagtctt tttcatacgg
    27721 catgataagg ccaatctctc cggcgtaatc tggatggcaa aagacttgcg cgggaccgtc
    27781 gctgcgttga cgtaattggt ggatccagcc gcgacgcagt agctcgtcac gcagaacctg
    27841 accagagatg tgatgcttac ggaagagctc gctgccctcg cccgtttcca tcagttcgat
    27901 gaaacgcagc tggatagggc gatgctggat ccagttcaga aaggtgtcga gctggtgatg
    27961 attaacatca cgcatcagca cggtattgac tttgaccttc tcaaaaccgg cctcaaatgc
    28021 agcatcaatc cctgccatga cctggttgaa tttatcctgc ccggtaatag cgtgaaactg
    28081 gcgggcgtcc agactgtcga cactgacgtt aatgccagta agtcccgcat cgcgccagtt
    28141 cgccacatcg cgttccagac ggtaaccatt ggtggtgacc gcaatctggc ggatagcgtc
    28201 gttttcccgc acagcggcga tgatatcggt aaagtcgcgg cgtaaagacg gctcacctcc
    28261 tgtcaggcgc actttttcgg tgcccagact ggcgaaggcg cgcgtaaccc ggcgaatttc
    28321 atcgacggta agaaagcctt tattggtgac gccgctcggt ttgtagccat ccggcaggca
    28381 gtaggtgcaa cgaaagttac acacatcggt aatcgacagg cgcaagtagt aaaacttacg
    28441 cgcaaatgca tcagtcagtt gtgaagccat gtacaccttt ccagatacgg gaggcgaagt
    28501 catttcttcc ttcgccctgg tggcaatctt tacgagcatt gtcacggcca aagcaccgta
    28561 tcagttgacc taggtgcaga ggctagagtg tttagtggtt aagccgatac tagcgtgtaa
    28621 atgggatttt taccatccac actttcgcta tgcaatcatg tatatagcgt catgatcgtg
    28681 ctatttcgct acagaataag ggaaaatggc agttttactt tgatatacat catcagggag
    28741 gcatagcgtg catcgtcctt tagaggtaga agaaaatagt ttgtatcctc aatattggca
    28801 ggttaattgc tgtttccccg caatttgcgc tactgtagcg cggataatct gactccagga
    28861 aactatatgc gcaatcgtac gctggctgat cttgatcgtg tcgttgctct cggcggaggg
    28921 catggactgg gacgcgttct ctcatcactt tcgtctttgg gttctcgttt aacgggtatc
    28981 gtcaccacca cggataatgg tggctcgacg gggcgcattc gccgttcaga aggcggcatt
    29041 gcctggggcg atatgcgcaa ctgcctcaac caactgataa cggaaccgag cgtcgcctcc
    29101 gcgatgtttg aataccgttt tggcggcaat ggcgaacttt ccgggcacaa ccttggaaac
    29161 ttgatgttaa aggcgctgga tcaccttagc gtgcggcctc tggaagccat caatttaatt
    29221 cgtaatctgc tgaaagtgga tacgcatttg attccaatgt cagagcatcc cgtcgatctg
    29281 atggcgattg acgatcaggg gcatgaagtt tacggcgagg tcaatatcga ccagttaact
    29341 acgccgattc aagagttatt attaacgccg aatgtacccg caacgcgtga ggcagttcac
    29401 gctatcaatg aagcggatct catcattatt gggcctggca gtttttatac cagcctgatg
    29461 ccaattctgc tgctgaagga aatcgcccag gcattacgcc gcacgccagc gccgatggtt
    29521 tatatcggca atctggggcg tgagttgagt ttacctgcgg ctaatttgaa gctggaaagc
    29581 aagctggcaa ttatggagca gtatgttggt aaaaaagtca ttgatgcggt catcgtcggg
    29641 ccaaaagtgg atgtctcggc ggtgaaagag cggattgtga tccaggaggt actggaggcc
    29701 agcgatattc cgtatcgtca tgaccgccag ttgttacata acgcgctgga aaaggcgtta
    29761 caggctttag gttaacggaa atccgaagga aaattccggc ttcctattga agacaaagtg
    29821 cgcgttgttt atgccggatg cggcgtgaac gccttatccg gcctacaaac cgcgcaaatt
    29881 caatatattg aggagaaaat gtaggcctga taagcgtagc gcatcaggct gttttccgtt
    29941 tgtcatcagt cttcttcgct atcctgttac gatgcggcaa taaacaactc acgcaactga
    30001 tgcaactggt cacgaatttg tgccgcttct tcgaactcca gattctgcgc gtgttgcatc
    30061 atcagccctt ccagttcatg gattttctgc tgcaacgctt tcggcgacat atccatcggc
    30121 acattatccg gctcaacaat cgggcgcgat tttcctctgc ccttcgcttt ggttttggca
    30181 atgttctgcc ccagcgccag gatatcgacc actttcttgt tcaagccttg cggcgtaatg
    30241 ccgtgttcct cgttgtactt ctgctgtttc tcacggcgac gttcggtttc gccaatcgct
    30301 ttcgccattg atggggtgat cttatcgccg tagagaatcg ctttaccgtt aacgttacgt
    30361 gccgcacgac caatggtctg gatcaacgaa cgttcggaac gcaggaagcc ttctttgtca
    30421 gcgtcgagga tcgccaccag cgacacttcc ggcatatcca gaccttcgcg cagtaagttg
    30481 atccctacca gcacgtcgaa ctcacccaga cgcaagtcgc ggataatctc catacgttcg
    30541 acggtgtcga tatctgagtg aagataacgc acgcgctcgc catgttcttc gagatattcg
    30601 gtaagatctt ccgccatccg cttggtcagt gtggtgacca gtacgcgttc gttaattgcc
    30661 gctcgctgac gaatctccga aagaagatca tcaacctgtg tcgccaccgg ccgcacttcg
    30721 ataatcgggt caagcaatcc ggttggacgc accacctgat ccaccacatc gccgccggat
    30781 ttttccagct cgtaattacc cggcgtcgcc gaaacataga tggtttgcgg cgctaatgct
    30841 tcgaactctt caaacttaag cggacggtta tccagcgctg atggcaggcg gaagccgtac
    30901 tccaccagtg tctctttacg cgcccggtca ccgcgataca tgccgccaat ttgtggaatg
    30961 gtgacgtgag attcatcgac gaccagcagc ccatcggcag gcaggtaatc aaacagcgtc
    31021 ggcggtggct cacccggtcc acgaccggag aggaagcgcg agtagttttc aatccccgaa
    31081 cagtagccca gctcgttcat catctccaga tcaaactggg tacgctgggt cagccgctgc
    31141 tcttccagca gtttgttgtt ttccaacagc actttgcgtc tggcggccag ttcttctttg
    31201 atctcctcca tcgcctgtac gatgcgctcg cgcggtgtga cgtagtgcgt tttcgggtag
    31261 atggtaaaac gtggaatagt ggaaacaatc tgcccggtca gcgggtcaaa taacgacaat
    31321 cgttccactt cctcgtcaaa cagttccacg cgaagtgcaa tgtcatccga ttctgccggg
    31381 aagatatcaa tcacctcgcc acgaacgcgg aaagtaccac gctggaatgc ttgatcatta
    31441 cgagcgtatt gcagctccgc cagtcggcgc agaatcgcgc gctgatcgat aatcataccg
    31501 accgtgagat ggagcatcat cttgagatat aaatcaggat cgcccagacc ataaatcgcg
    31561 gaaacagagg ccactacaac cacatcacgc cgctccagca tcgctttggt ggcggataaa
    31621 cgcatctgct caatatgttc gttaaccgag gcatctttct caatgaaagt gtcggaactc
    31681 ggtacatagg cttccggctg atagtagtcg tagtaggaga cgaaatactc caccgcgttt
    31741 tccgggaaga actctttcat ttcgccatac agctgggccg ccagcgtttt gttgggcgca
    31801 agtaccatgg ttgggcgctg aaggtcagca atgacattgg caatggtgaa ggttttccct
    31861 gagccagtca cgccaagtaa cgtctggtgc gccaggccat cttccagccc ctcttcgaga
    31921 cgtcgaatcg cctctggctg atcgccagaa ggtttaaaag cggaattcag tttgaacggt
    31981 ttactcatga gtcgctacct gaaggagttg ggcgggcagg tatgtaattt tactcgtcgt
    32041 acttaattat gccaacaaat tatactggat aaaaaaacag ttcatcacca taatatttct
    32101 gatacagcgt aaactccgct gtcaatcatg agcaaaattt actctgtggc gagataaaac
    32161 tccggcctta ccgggttatc cccaaagcaa cggctttttt aacatttgtc aagatgagtg
    32221 atgacagttt tatggcaaga gatgcctgtt cagtgactgc cattgcattt atctaaccag
    32281 ttaaaaaata aaagatattt ctttgagccg tctttaacgc caattcgcgt gcaagccgcg
    32341 tattctctcg cttgcctcgt gttttctaac tctaatacac atggttatcc acaggaatag
    32401 tggataactg tctccagccc ctatcccccg ccgcctgggc aattcccaca ttcgccgcat
    32461 gaggcggaag taaaattttt ttcgtgatta ttttagaatt taattggtta aattgcagtc
    32521 aatcgaagac gcgatctcgc tcgcaattta accaaataca gaatggctac aacaaggcaa
    32581 ggtttatgta ctttccggtt gccgcatttt ctggattttc tgcaagccag gggatctctc
    32641 ccagcagcgg cgcgggaatc atgcgggtga gcgtggtcat atattcagcg tgacgttttc
    32701 ccggaggcgt aacatcgttc gccacccaac ccgccagagt cagtccggcg tgttgtattg
    32761 cctgcgcagt caacatcgcg tgattaatac agccgagttt cacaccaact accagtatca
    32821 ccggcagttg ttcctgtgtt acccaatctg caaaagtgaa agtgtcagaa agcggcgtaa
    32881 accagccgcc agcaccttcc actaacaccc agtcagcctg ttgttcaagc gcgcgtaatc
    32941 cggcgctcat taccaatgat tctatcggcc tgccctcttg cgcactgatg atgtgcggcg
    33001 aagtgggttc tgcgaaggtg taaggattta ctattgcgta atccagctgc aggctgctgt
    33061 tgtgctgtaa cgccagcgcg tcactattac gtaagccttc cggggtcttt tcgctgccag
    33121 aggcgaccgg tttataacct gccgtccgat aacctactgc cttcgcggct tgtaaaagtg
    33181 cacaactggc gacggttttc cccacttcgg tatccgttcc ggtgacaaaa taacgtttac
    33241 tcacgagcaa tcactcccaa aaaaagatga tacgtcagag gatatcgccc ctgttgttgc
    33301 ggccaggcca gttgcaatcg ctgcaattgc gaacgcgtta atattcgcgg gtcgcgccct
    33361 tcatgaagat gcgtagcacc gatgcctttc agcgaacgca tggcactgag cgcatcatca
    33421 aaccatagtg tgatgggctg aatatgatgt tgataatgca cgccgttcag cgactgttcg
    33481 atttcatctg gcggtaaaaa gcgattagca tgcggacgct cgtccaccgc ctgccacgcc
    33541 tgatgcagtt cgggtaacga tccctgcacc agcgtggtaa acgccaccac gcctccgggg
    33601 cgcaccaccc gatacagctc gcggagtgcc gtggataaat taccgcacca ctgcaccgcg
    33661 agattgctcc atgcaagatc gaacgtcgca gtcgctaacg gcagggattc gatatctccc
    33721 gccagataat ggtctgcagc atctttctgg cgggcttgca caagcattgg cggtgagaga
    33781 tctaacgccg tcacctgtgc gtgacgctct cgccagtggc ggctcatcca gcctggccca
    33841 caccccgcgt ccagtacgtg ggtgtattta cgctgtggga gcattgccag taagacgtca
    33901 gcactccggc gctgtaactc tgcgtgttgc tcatagtgcg cggctgcccg accaaatgcc
    33961 gctgcaatgg cttgtttatt aaccgttgcc atgcagcacc tccagcagac ggtcgatatc
    34021 ctgcatttca tgcgctgcgg ttagcgttaa gcgcagtcgc gcagtaccag cgggtacggt
    34081 tggcgggcga atcgccgtga cccagcagcc ttgctggcgc agtttttctg ccagttgtaa
    34141 cgcacggctg ttatcaccga cgatcaatgg ctggatggcg ctgcatgaat cagcaagcgt
    34201 aaacggcaaa tcctgtactc cggcacgaaa acgcgcaatg agtgacacca gtttttcgcg
    34261 ccgtgcatcc ccctcatcac ggcgaatgac cgccagcgac gcacgtaatg cctgcgcctg
    34321 agcgggcggc atactggtgt tgtagataag gtggcgggcg aattgcagca gataatccgc
    34381 caccgtactg gagcaaagca ccgctgcccc gctgacgcca aatcctttgc caaaagtcac
    34441 caccagcaat tctggtttta ccttttgcag ccagcagctg ccgcgcccct gctccccgat
    34501 aacgcccgtg ccgtgggcat catcgaccat caaccagcca ttgtgctgtt gcgttacctg
    34561 ctggatttcc gccagtggcg cactatcgcc gtccatgctg aacacgcctt ctgtcaccac
    34621 cagttgctgc cccggacagg gggaagcaag cagtcgcgcc agatgagtga catcgttatg
    34681 aacaaaacgg cgaagctgcg acgggcttaa actggcagcc tccagcaatg aggcatggct
    34741 aagccggtca gcgacaatgc ggtcctcttt tgccatcatc gcggcaatga ccgcctgatt
    34801 agcggcaaaa ccagagataa atagcagtgc ccgcgaatag cccagccact cggccagttc
    34861 ttcttccagc gcctgatgcg caacgctata accgctgacg tgaccggaac cgccgctacc
    34921 gacgccaaat tgctccgcac cctgctgcca ggcacggata atttgcggat gatggcttaa
    34981 acctaaataa tcgttactgg aaaagttcag atactggcga tcatccgcca ccagccagcg
    35041 tccggctcct tgcgccactg gataacggcg acgcagggca tcggcagcac gccgcgcatc
    35101 gagcgccgcg ttgattttct cctgccagct catagtgctg ccgcgttgta atattcgtca
    35161 gtatccgggg tcatcagcgc ctgttcaaga cgttgctgtt gttcgttatc ccctgccagc
    35221 acggcagttt gctgcggatt tagccccagt ttgcggaaca gttgcaggtc tttatcttct
    35281 tccggattcg gcgtggtcag cagtttgcaa ccgtagaaaa tcgagtttgc gcctgccata
    35341 aagcacatcg cctgagtctg ttcgttcatc tgctcgcgtc cggcagaaag gcgcacgtaa
    35401 gaggtcggca tcatgatccg cgcgaccgca atggtgcgaa taaaatcaaa ggcatcaacg
    35461 tcatcgttat cggcaagcgg cgtgcctttc accttcacca gcatgttgat tggcacgctt
    35521 tccggcggcg tcggcaggtt tgccagttgc agcaataatc cggcgcgatc ttttaccgtt
    35581 tcgcctaagc ccacaatgcc gccagaacag actttgatcc cggcatcgcg cactttttcc
    35641 agcgtatcga ggcgttcctg ataagtgcgg gtggtgatga tattgccgta aaactccggc
    35701 gaggtgtcga ggttgtggtt gtagtaatcc agcccggcgt tcgcgaggcg ctgcgcctga
    35761 gattcactca acgtgcccag cgtcatacac gcctccagcc ctaaatcttt taccccctgc
    35821 accatctgct ccaggtacgg catatcgcgt tcgttgggat tcttccacgc cgcgcccatg
    35881 caaaaacgcg tcgatcccgc cgctttcgct ttgcgcgccg actccagcac ctgttcaact
    35941 tccatcaacc gctcggcttc cagcccggtt ttatagcgcg agctttgcgg gcaatatttg
    36001 caatcttccg ggcaagcacc ggttttaatc gacagcaacg tgctgacctg cacctgacga
    36061 ggatcgaaat gctggcgatg cacctgctgc gcttcaaaca gcagatccag caacggtttt
    36121 tcaaataatt ctgcgacttg cgacaatgtc cagcgtgggc ggtgagccat ggggcttctc
    36181 caaaacgtgt tttttgttgt taattcggtg tagacttgta aacttaaata ttttcaattt
    36241 ggtttacaag tcgattatga caaaggacga tcttgccttt gaccaacgcc atatctggca
    36301 cccatacaca tccatgacct ccccgctgcc ggtttatccg gtggtgagcg ccgaaggttg
    36361 cgagctgatt ttgtctgacg gcagacgcct gattgacggt atgtcgtcct ggtgggcggc
    36421 gatccacggc tacaatcacc cgcagcttaa tgcggcgatg aagtcgcaaa ttgatgccat
    36481 gtcgcatgtg atgtttggcg gtatcaccca tgcgccagcc attgagctgt gccgcaaact
    36541 ggtggcgatg acgccgcaac cactggaatg cgtttttctc gcggactccg gttccgtagc
    36601 ggtggaagtg gcgatgaaaa tggcgttgca gtactggcaa gccaaaggcg aagtgcgcca
    36661 gcgttttctg accttccgca atggttatca tggcgatacc tttggcgcga tgtcggtgtg
    36721 cgatccggac aactcaatgc acaacctgtg gaaaggctat ctgccagaaa acctgtttgc
    36781 tcccgccccg caaagccgca tggatggtga atgggatgaa cgcgatatgg ttggctttgc
    36841 ccgcctgatg gtggcgcatc gtcatgaaat cgcggcggtg atcattgaac cgattgtcca
    36901 gggcgcaggc gggatgcgca tgtaccatcc ggaatggtta aaacgaatcc gcaaaatgtg
    36961 cgatcgcgaa ggtatcttgc tgattgccga cgagatcgcc accggatttg gtcgtaccgg
    37021 caaactgttt gcctgtgaat atgcagaaat cgcgccggac attttgtgcc tcggtaaagc
    37081 cttaaccggc ggcacaatga ccctttccgc cacactcacc acgcgcgagg ttgcagaaac
    37141 catcagtaac ggcgaagccg gctgctttat gcacgggcca acttttatgg gcaatccgct
    37201 ggcctgcgcg gctgcaaacg ccagcctggc gattctcgaa tctggcgact ggcagcaaca
    37261 ggtggcggct attgaagtac agctgcgcga gcaacttgcc cccgcccgtg atgccgaaat
    37321 ggttgccgat gtgcgcgtgc tgggggcaat cggcgtagtc gaaacaactc gtccggtgaa
    37381 tatggcggcg ctgcaaaaat tctttgtcga acagggggta tggatccggc cttttggcaa
    37441 actgatttac ctgatgccgc cctatattat tctcccgcaa cagttgcagc gtctgaccgc
    37501 agcggttaac cgtgcggtgc aggatgaaac atttttttgc caataacggg aagtcagcgt
    37561 gtgggtttct ggctacactt tctgcaaact agaaaggagg gttcatgaaa ctcatcagta
    37621 atgatctgcg cgatggcgat aagctgccgc atcgtcatgt ctttaacggc atgggttacg
    37681 atggcgataa tatttcaccg catctggcgt gggatgatgt tcctgcggga acgaaaagtt
    37741 ttgttgtcac ctgctacgac ccggatgcgc caaccggctc cggctggtgg cactgggtag
    37801 ttgttaattt acccgctgat acccgcgtat taccgcaagg gtttggctct ggtctggtag
    37861 caatgccaga cggcgttttg cagacgcgta ccgattttgg taaaaccgga tacgatggcg
    37921 cagcgccgcc gaaagacgaa acccatcgct acatttttac cgttcacgcg ctggatgtag
    37981 agcatattga tgtcgatgaa ggagccagcg gcgcgatggt cgggtttaac gttcatttcc
    38041 actctctggc aagcgcatcg attaccgcga tgtttagtta atcactctgc cagatggcgc
    38101 aatgctatct ggtatcactt aaaggtatta aaaacaactt tttgtctttt taccttcccg
    38161 tttcgctcaa gttagtataa aaaagcaggc ttcaacggat tcatttttct atttcatagc
    38221 ccggagcaac ctgtgaacac attttcagtt tcccgtctgg cgctggcatt ggcttttggc
    38281 gtgacgctga ccgcctgtag ctcaacacca cccgatcaac gtccttctga tcaaactgcg
    38341 cctggtacct cttctcgccc gattctgtcg gcaaaagaag cgcagaattt cgatgctcaa
    38401 cactattttg catccctgac accaggtgct gcagcgtgga atccttcccc gattaccctg
    38461 cctgcgcaac ctgactttgt tgtcggcccg gcgggcactc aaggtgtaac gcataccacg
    38521 attcaggcgg cggtagatgc ggcaattatc aagcgtacca acaagcgcca gtatattgcc
    38581 gtgatgcctg gtgagtatca gggaacggtg tatgtccctg ctgctccggg tggaattact
    38641 ctgtacggta caggtgaaaa accgattgat gtgaagattg ggctttccct tgatgggggc
    38701 atgagccctg ccgactggcg tcacgacgtc aacccgcgcg gcaaatatat gccaggtaaa
    38761 ccagcgtggt atatgtacga tagctgccag agcaaacgca gcgacagtat cggtgttctc
    38821 tgctctgcgg tcttctggtc acaaaacaat ggcctgcaac tgcaaaacct gaccatcgaa
    38881 aacacgctgg gcgatagcgt agatgcaggt aaccatccgg cggtggcact gcgtactgat
    38941 ggtgaccagg tacagattaa caacgttaac attctcggtc gtcagaacac cttctttgtc
    39001 accaacagcg gtgtgcagaa ccgtctggaa acgaatcgtc agccgcgtac gctggtgacc
    39061 aacagctaca ttgaagggga tgtggatatc gtttctggtc gcggcgcagt ggtgttcgat
    39121 aacaccgaat tccgcgtggt gaactcacgt actcagcaag aagcgtatgt gtttgcaccg
    39181 gctacgctgt ccaacattta ctacggtttc ctcgccgtaa acagccgttt caatgctttc
    39241 ggtgatggtg tggcgcaact gggccgctcg ctggatgttg atgccaatac caacggtcag
    39301 gtggtgatcc gtgatagcgc catcaacgaa ggttttaaca cggctaaacc gtgggccgat
    39361 gcggtgatct ctaatcgtcc gtttgcgggt aataccggca gcgtagatga taacgacgaa
    39421 atacagcgca atctgaatga cactaactac aaccgcatgt gggaatacaa taaccgcggc
    39481 gtgggtagta aagtggttgc agaggcgaag aagtaagagc aattaactat ttgccggatg
    39541 cggcgtaaac gccttatccg gcctacggtt cgatgcgatt tgtaggtcgg ataagatgcg
    39601 caagcatcgc atccgacaat aagtgccgaa tgcgacctac attcacatgg cgctttttac
    39661 atctgacggt ttttattgaa gttaatcaaa ctacccgcct tgataatctc gcgctcttca
    39721 gcagtcagac tttccatata gagcgtaatt tccgttaccg gcgcatcttc atggatcaca
    39781 taacctttaa acgtcgtacc cggattatcc agcgccgctt taatgccagg gatgtaaatg
    39841 taatccccca cttcaaaggt tggcacttcc gccatctgca gcggtaacat cccccagttg
    39901 atgacgttag aacggtagcg tttagtcgcg tactcttcgg caatattcgc cagaccgcca
    39961 atcacacgct ggcagctcgc cgcctgttca cgcgcagaac catcgcctgg tttcaccgca
    40021 tataccatgc tgccaatttc agtttgcagc ggatcaatat gctcctgacc agcaatctgc
    40081 ttaatgcgcg caaacacctc tgtcagctcg ctgacattcc ccgccagacg ctgattttcc
    40141 agctcagcag tcgctttact tctgccaaca taaccgggat cgcggcgtga cagggtaaac
    40201 tccgccagac caatctgatt tgaacgataa gaagaggttt caccggaagg aatcagttcg
    40261 tcggtggtgg tcacttcgtc gaggatcttc gagcacactt tcaggacgat attgtcagtc
    40321 agcgccccca attccggcca gtctttaatg ttcggtccgt aaatcagcgg ttgctgagtt
    40381 gcccctttca caaggccctg ataaacacgg tttttatacg gcgttacatc gaaggcgtac
    40441 tccggcacgt tgtcccagca atcaagttcg ctggcagagg ttaaatagcc accgtttgcc
    40501 gcagtcgcag cgatagaacg agcgtccatc aacgccaccg ctgacatctg cccattagct
    40561 ggcttagagc cttcgcggtt cgggaagtta cgcgtggtgt ggcgaatact taatccgttg
    40621 ttgattggcg tatcgcccgc gccaaagcat gggccgcaga acgcggttct gatgattgcg
    40681 cctgcgccaa tcaaatctgc taccacacct tttttggcta aatccataaa caccggctgt
    40741 gatgacgggt aaaccgccag cgagaaggtg tcattgccac aggattgacc gcgcagtgca
    40801 ttcgccgccg cgatgacgtt ttcgtagtta ccgccagaac agcccgcgat aatcccctgc
    40861 tgcactttca ggcgaccatt ttccacttta tccagcagcg agagtttggc tttaccgtgc
    40921 gccacgcgtt cggactcaat ttcaatctca cgcagaatgt cggtcaggtt ctggttcagt
    40981 gtgtcgattt catacacgtt gctcgggtgg aacggcagcg caatcattga tttgatggcg
    41041 cttaaatcaa cgctgatgca gccatcgtag tacgccatcg gttgagggtt aagctggcag
    41101 taatcctggc cgcgaccgtg cagcgccagc cagttatgca cttcttcatc agtttgccag
    41161 acggagctta aacaggtggt ttccgtggtc atcacgtcaa cgctgttacg gaaatcggta
    41221 gagagcgcgc taacgcccgg tccaacgaac tccatgactt tgtttttgac gtaaccgttt
    41281 ttgaacaccg cgccaatgat agccagcgcc acatcctgtg gccccacata cggcgcaggt
    41341 tttccggtca gatgcaccgc aaccacgccc ggatagtcga tatcccaggt gtcattaagc
    41401 agctgtttta ccaactcacc gccgccctca ccgactgcca ttgtccctaa tgcaccgtaa
    41461 cgggtgtggc tgtctgaccc gaggatcatt ttgcccccgc ctgccatcat ctcacgcata
    41521 tattgatgga tgaccgcaat atgcggaggc acaaaaatac cgccataacg ctgagctgcc
    41581 gataaaccaa aaacatggtc atcaccgtta atggtgccgc cgacggcgca gagtgagtta
    41641 tggcagttgg tcagcacata cggcagcggg aaacgttcca ttccggacgc tttagcggtc
    41701 tgtacaatac caacaaaggt aatatcgtga gaggctaatg aatcaaactt aattttaagt
    41761 ttatccatat ttccggacgt attatgagaa gagagaatag accaggcaat agtgcctttt
    41821 ttggcttctt cttttttaat ttcgccggtg aaatgttctt cggcaattat ttcgttatta
    41881 ctggcgagaa acacgcctt
//
LOCUS       DADMHC010000006        41559 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.006, whole genome shotgun sequence.
ACCESSION   DADMHC010000006 DADMHC010000000
VERSION     DADMHC010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 41559)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41559)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41559
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.006"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            299..1882
                     /locus_tag="JNZ57_000268"
     CDS             299..1882
                     /locus_tag="JNZ57_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HAY8826614.1"
                     /translation="MEWIADPSIWAGLITLIVIELVLGIDNLVFIAILAEKLPPKQRD
                     RARVTGLLLAMLMRLLLLASISWLVTLTQPLFSFRSFTFSARDLIMLFGGFFLLFKAT
                     MELNERLEGKDSNNPTQRKGAKFWGVVTQIVVLDAIFSLDSVITAVGMVDHLLVMMAA
                     VVIAISLMLMASKPLTQFVNSHPTIVILCLSFLLMIGFSLVAEGFGFVIPKGYLYAAI
                     GFSVMIEALNQLAIFNRRRFLSANQTLRQRTTEAVMRLLSGQKEDAELDAETASMLVD
                     HGNQQIFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHIDLNAPEEEIRQLLERNQHT
                     RLVVTDGDDAEDLLGVVHVIDLLQQSLRGEPLNLRVLIRQPLVFPETLPLLPALEQFR
                     NARTHFAFVVDEFGSVEGIVTLSDVTETIAGNLPNEVEEIDARHDIQKNADGSWTANG
                     HMPLEDLVQYVPLPLDEKREYHTIAGLLMEYLQRIPKPGEEVQVGDYLLKTLQVESHR
                     VQKVQIIPLRKDGEMEYEV"
     gene            complement(2334..4187)
                     /gene="asmA"
                     /locus_tag="JNZ57_000269"
     CDS             complement(2334..4187)
                     /gene="asmA"
                     /locus_tag="JNZ57_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane assembly protein AsmA"
                     /protein_id="HAY8826615.1"
                     /translation="MRRFLTTLMILQVVLVAGLSALVLLVNPNDFRDYMVKQVAARSG
                     YQLQLDGPLRWHVWPQLSILSGRMSLTAQGATQPLVRADNMRLDVALLPLLSHQLSIK
                     QVMLKGAVIQLTPQTEAVRSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVVDSVLVFQ
                     HEDDEQVTIRNIRLQMEQDPQHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTA
                     AIEQINWQLQGADLPKQGIQGQGSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTL
                     TEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLPRPVISSRIDEPAYQ
                     GLQGFTADILLQASNVRWRGMNFTDVATQMTNKSGLLEITQLQGKLNGGQVSLPGTLD
                     ATSINPRINFQPRLENVEIGTILKAFNYPISLTGKMSLAGDFSGADIDADAFRHNWQG
                     QAHVEMTDTRMEGMNFQQMIQQAVERNGGDVKAAENFDNVTRLDRFTTDLTLKDGVVT
                     LNDMQGQSPVLALTGEGMLNLADQTCDTQFDIRVVGGWNGESKLIDFLKETPVPLRVY
                     GNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAERNKDSRNGKDVKKLLEKM"
     gene            complement(4209..4790)
                     /gene="dcd"
                     /locus_tag="JNZ57_000270"
     CDS             complement(4209..4790)
                     /gene="dcd"
                     /locus_tag="JNZ57_000270"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HAY8826616.1"
                     /translation="MRLCDRDIEAWLDEGRLSINPRPPVERINGATVDVRLGNKFRTF
                     RGHTAAFIDLSGPKDEVSAALDRVMSDEIVLDEGEAFYLHPGELALAVTLESVTLPAD
                     LVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSF
                     EPLSGPAARPYNRREDAKYRNQQGAVASRIDKD"
     gene            complement(4882..5523)
                     /gene="udk"
                     /locus_tag="JNZ57_000271"
     CDS             complement(4882..5523)
                     /gene="udk"
                     /locus_tag="JNZ57_000271"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HAY8826617.1"
                     /translation="MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVI
                     PEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTR
                     MKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRS
                     MDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE"
     gene            5841..9147
                     /locus_tag="JNZ57_000272"
                     /pseudo
     CDS             5841..9147
                     /locus_tag="JNZ57_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416571.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
     gene            complement(9256..10104)
                     /gene="alkA"
                     /locus_tag="JNZ57_000273"
     CDS             complement(9256..10104)
                     /gene="alkA"
                     /locus_tag="JNZ57_000273"
                     /EC_number="3.2.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2"
                     /protein_id="HAY8826618.1"
                     /translation="MYTLNWQPPYDWSWMLGFLAARAVSGVETVADDYYARSLAVGEY
                     RGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLLDLQCNPQIVNGALGKLGAAR
                     PGLRLPGSVDAFEQGVRAILGQLVSVAMAAKLTAKVVQLYGERLDDFPEYICFPTPQR
                     LAAADPQALKALGMPLKRAEALIHLANAALEGSLPMTIPGDVEQAMKTLQTFPDIGRW
                     TANYFALRGWQAKDVFLPDDYLIKQQFPGMTPAQIRRYAERWKPWRSYALLHIWYTEG
                     WQPDEA"
     gene            10238..11590
                     /gene="yegD"
                     /locus_tag="JNZ57_000274"
     CDS             10238..11590
                     /gene="yegD"
                     /locus_tag="JNZ57_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HAY8826619.1"
                     /translation="MFIGFDYGTANCSVAIMRDGKPHLLKMENDSTLLPSMLCAPTRE
                     AVSEWLYRHHDVPADDDETQALLRRAIRYNHEEDIDVTAKSVQFGLSSLAQYIDDPEE
                     VWFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIRQQAQAQLPETITQAVIGRPINF
                     QGLGGDEANTQAQGILERAAKRAGFRDVVFQYEPVAAGLDYEATLQEEKRVLVVDIGG
                     GTTDCSLLLMGPQWRSRLDREASLLGHSGYRIGGNDLDIALAFKNLMPLLGMGGETEK
                     GIALPILPWWNAVAINDVPAQSDFYSSANGRLLNDLVRDAREPEKVALLQKIWRQRLS
                     YRLVRSAEECKIALSSVAETRASLPFISDELATLISQQGLESALSQPLARILEQVQLA
                     LDNAQEKPDVIYLTGGSARSPLIKKALAEQLPGIPIAGGDDFGSVTAGLARWAEVVFR
                     "
     gene            complement(11603..13543)
                     /gene="yegI"
                     /locus_tag="JNZ57_000275"
     CDS             complement(11603..13543)
                     /gene="yegI"
                     /locus_tag="JNZ57_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310906.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase YegI"
                     /protein_id="HAY8826620.1"
                     /translation="MKPTLYTATGECVTPGRELGKGGEGAVYDINEFVDSVAKIYHTP
                     PPALKQDKLAFMAATADAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGKEPIHMIYS
                     PAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDS
                     DSFQINANGTLHLCEVGVSHFTPPELQTLPSFVGFERTANHDNFGLALLIFHVLFGGR
                     HPYSGVPLISDAGNALETDIAHFRYAYASDNQRRGLKPPPRSIPLSMLPGDVEAMFQQ
                     AFTESGVATGRPTAKAWVAALDSLRQQLKKCTVSAMHVYPAHLTDCPWCTLDNQGVIY
                     FIDLGEEVITTGGDFVLAKVWAMVMASVAPPALQLPLPDHFQPTGRPLPLGLLRREYI
                     ILIEIALSALSLLLCGLQAEPRYIILVPVLAAIWIIGSLTSKAYKAEVQQRREAFNRA
                     KMDYDHLVSQSQQLGGLEGFIAKRTMLEKMKDEILGLPEEEKRALAALHDTARERQKQ
                     KFLEGFFIDVASIPGVGPARKAALRSFGIETAADVTRRGVKQVKGFGDHLTQAVIDWK
                     ASCERRFVFRPNEAVTPAERQAVMAKMAAKRHRLELALTVGATELQRFRLHAPARTMP
                     LMEPLRQAAEKLAQAQADLSRC"
     gene            complement(13540..14301)
                     /locus_tag="JNZ57_000276"
     CDS             complement(13540..14301)
                     /locus_tag="JNZ57_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HAY8826621.1"
                     /translation="MSWRLVYASAVGTSHISADLPCQDACQMQVAWLNDQQPLLVMFL
                     ADGAGSVSQGGEGAKLAVNEAMAFMVQKVQDGELGLNDVLATNMVLTIRQRLFAEAEA
                     KALAVRDFACTFLGLISSANGTLIMQIGDGGVVVDFGRGLELPLTPMVGEYANMTHFI
                     SDEDAVSRLETFTSTERAHKVAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLAAATQE
                     QLDLLPELLKQFLSSPAVNERTDDDKTLALALWLP"
     gene            complement(14298..14957)
                     /locus_tag="JNZ57_000277"
     CDS             complement(14298..14957)
                     /locus_tag="JNZ57_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HAY8826622.1"
                     /translation="MSEQITFATSDFASNPEPRCPCILLLDVSGSMNGRPINELNAGL
                     VTFRDELLADSLALKRVELGIVTFGPVHVEQPFTSAANFFPPILFAQGDTPMGAAITK
                     ALDMVEERKREYRANGISYYRPWIFLITDGAPTDEWQAAANKVFQGEEDKKFAFFSIG
                     VQGADMKTLAQISVRQPLPLQGLQFRELFSWLSSSLRSVSRSTPGTEVVLEAPKGWTS
                     V"
     gene            complement(15178..15237)
                     /gene="ibsA"
                     /locus_tag="JNZ57_000278"
     CDS             complement(15178..15237)
                     /gene="ibsA"
                     /locus_tag="JNZ57_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin IbsA"
                     /protein_id="HAY8826623.1"
                     /translation="MMKHVIILVILLVISFQAY"
     gene            complement(15510..15566)
                     /locus_tag="JNZ57_000279"
     CDS             complement(15510..15566)
                     /locus_tag="JNZ57_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HAY8826624.1"
                     /translation="MMRLLIIVVLLVISWPAY"
     gene            complement(15838..15894)
                     /locus_tag="JNZ57_000280"
     CDS             complement(15838..15894)
                     /locus_tag="JNZ57_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HAY8826625.1"
                     /translation="MMKILIIVVLLVISYPAY"
     gene            16173..17420
                     /gene="mdtA"
                     /locus_tag="JNZ57_000281"
     CDS             16173..17420
                     /gene="mdtA"
                     /locus_tag="JNZ57_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310909.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter subunit MdtA"
                     /protein_id="HAY8826626.1"
                     /translation="MKGSYKSRWVIVIVVVIAAIAAFWFWQGRNDSQSAAPGATKQAQ
                     QSPAGGRRGMRSGPLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLMALH
                     FQEGQQVKAGDLLAEIDPSQFKVALAQAQGQLAKDKATLTNARRDLARYQQLAKTNLV
                     SRQELDAQQALVSETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQIS
                     SGDTTGIVVITQTHPIDLLFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTL
                     LSLDNQIDATTGTIKVKARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNE
                     GHFVWVLNSENKVSKHLVTPGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVE
                     AQSATTPEEKATSREYAKKGARS"
     gene            17420..20542
                     /gene="mdtB"
                     /locus_tag="JNZ57_000282"
     CDS             17420..20542
                     /gene="mdtB"
                     /locus_tag="JNZ57_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MdtB"
                     /protein_id="HAY8826627.1"
                     /translation="MQVLPPSSTGGPSRLFIMRPVATTLLMVAILLAGIIGYRALPVS
                     ALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVITL
                     QFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTSTAMPM
                     TQVEDMVETRVAQKISQISGVGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAIT
                     GANVNSAKGSLDGPSRAVTLSANDQMQSAEEYRQLIIAYQNGAPIRLGDVATVEQGVE
                     NSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVEVTVLSDRTT
                     NIRASVDDTQCELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFS
                     INNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPLAAALKGAGEIGFTIISLTFS
                     LIAVLIPLLFMGDIVGRLFREFAITLAVAILISAVVSLTLTPMMCARMLSQESLRKQN
                     RFSRASEKMFDRIIAAYGRGLAKVLNHPWLTLSVALSTLLLSVLLWVFIPKGFFPVQD
                     NGIIQGTLQAPQSSSFANMAQRQRQVADVILQDPAVQSLTSFVGVDGTNPSLNSARLQ
                     INLKPLDERDDRVQKVIARLQTAVDKVPGVDLFLQPTQDLTIDTQVSRTQYQFTLQAT
                     SLDALSTWVPQLMEKLQQLPQLSDVSSDWQDKGLVAYVNVDRDSASRLGISMADVDNA
                     LYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALGTIRLTSSDGGVVPLSSIAKI
                     EQRFAPLSINHLDQFPVTTISFNVPDNYSLGDAVQAIMDTEKTLNLPVDITTQFQGCT
                     LAFQSALGSTVWLIVAAVVAMYIVLGILYESFIHPITILSTLPTAGVGALLALMIAGS
                     ELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPRDAIYQACLLRFRPILMTT
                     LAALLGALPLMLSTGVGAELRRPLGIGMVGGLVVSQVLTLFTTPVIYLLFDRLALWTK
                     SRFACHEEEA"
     gene            20543..23620
                     /gene="mdtC"
                     /locus_tag="JNZ57_000283"
     CDS             20543..23620
                     /gene="mdtC"
                     /locus_tag="JNZ57_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MdtC"
                     /protein_id="HAY8826628.1"
                     /translation="MKFFALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPV
                     IMVSASLPGASPETMASSVATPLERSLGRIVGVSEMTSSSSLGSTRIILQFDFDRDIN
                     GAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFAST
                     QLAPTISQIDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAISNANVRKPQG
                     ALEDGTHRWQIQTNDELKTAAEYQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTN
                     AKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEV
                     EQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMAL
                     TIATGFVVDDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLL
                     LMGGLPGRLLREFAVTLSVAIGISLLVSLTLTPMMCGWMLKASKPREQKRLRGFGRML
                     VALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYISIPKTFFPEQDTGVLMGGIQA
                     DQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGGSRVNSGMMFITLKPRDERSETAQ
                     QIIDRLRAKLAKEPGANLFLMAVQDIRVGGRQSNASYQYTLLSDDLAALREWEPKIRK
                     KLATLPELADVNSDQQDNGAEMNLVYDRDTMARLGIDVQAANSLLNNAFGQRQISTIY
                     QPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQGL
                     SAASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILI
                     IAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLI
                     GIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLAALFDALPLVLSG
                     GDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKPKQTVTE"
     gene            23621..25036
                     /locus_tag="JNZ57_000284"
     CDS             23621..25036
                     /locus_tag="JNZ57_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8826629.1"
                     /translation="MTDLPDSTRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESP
                     LHMHMVIVSYVLTVAVMLPASGWLADKVGVRNIFFTAIVLFTLGSLFCALSGTLNELL
                     LARALQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY
                     ASWHWIFLINIPVGIIGAIATLLLMPNYTMQTRRFDLSGFLLLAVGMAVLTLALDGSK
                     GTGLSPLTIAGLVAVGVVALVLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIG
                     SGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATT
                     LGLSLVTLLFMTTALLGWYYVLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNS
                     LLSMIMQLSMSIGVTIAGLLLGLFGSQHVSVDSGTTQTVFMYTWLSMALIIALPAFIF
                     ARVPNDTHQNVAISRRKRSAQ"
     gene            25033..26436
                     /gene="baeS"
                     /locus_tag="JNZ57_000285"
     CDS             25033..26436
                     /gene="baeS"
                     /locus_tag="JNZ57_000285"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     BaeS"
                     /protein_id="HAY8826630.1"
                     /translation="MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIK
                     HGNEQRLQLLSDALGEQYAQHGNWRFLRNNDRFVFQILRSFEHDNSEDKPGPGMPPHG
                     WRTQFWVVDQNNKVLVGPRAPIPPDGTRRPILVNGAEVGAVIASPVERLTRNTDINFD
                     KQQRQTSWLIVALATLLAALATFLLARGLLAPVKRLVDGTHKLAAGDFTTRVTPTSED
                     ELGKLAQDFNQLASTLEKNQQMRRDFMADISHELRTPLAVLRGELEAIQDGVRKFTPE
                     TVASLQAEVGTLTKLVDDLHQLSMSDEGALAYQKAPVDLIPLLEVAGGAFRERFASRG
                     LKLQFSLPDSITVFGDRDRLMQLFNNLLENSLRYTDSGGSLQISAGQRDKTVRLTFAD
                     SAPGVSDDQLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHNGRIIAAHSPFGG
                     VSITVELPLERDLQREV"
     gene            26433..27155
                     /gene="baeR"
                     /locus_tag="JNZ57_000286"
     CDS             26433..27155
                     /gene="baeR"
                     /locus_tag="JNZ57_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BaeR"
                     /protein_id="HAY8826631.1"
                     /translation="MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGD
                     QVLPYVRQTPPDLILLDLMLPGTDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGLEI
                     GADDYICKPYSPREVVARVKTILRRCKPQRELQQQDAESPLIIDEGRFQASWRGKMLD
                     LTPAEFRLLKTLSHEPGKVFSREHLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAE
                     QSFIRAVYGVGYRWEADACRIV"
     gene            27346..27678
                     /locus_tag="JNZ57_000287"
     CDS             27346..27678
                     /locus_tag="JNZ57_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310915.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegP family protein"
                     /protein_id="HAY8826632.1"
                     /translation="MAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKASAEKGIA
                     SVRSNSPQEERYEKKTASNGKFYFNLKAANHQIIGSSQMYATAQSRETGIASVKANGT
                     SQTVKDNT"
     gene            27887..28183
                     /locus_tag="JNZ57_000288"
     CDS             27887..28183
                     /locus_tag="JNZ57_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001307279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HAY8826633.1"
                     /translation="MTYTDVRFLLTGGRKMARTMTVDLGDELREFIESLIESGDYRTQ
                     SEVIRESLRLLREKQAESRLQALRDMLAEGLSSGEAQPWEKDAFLRKVKAGIRK"
     gene            28185..28481
                     /locus_tag="JNZ57_000289"
     CDS             28185..28481
                     /locus_tag="JNZ57_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001220181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HAY8826634.1"
                     /translation="MRIIKLMPKANEDLEGIWYYSYHHFGEPQADRYVEHLSDVLQIL
                     SNNNIGTPRPELGEGIFVLPFERHVIYFLQSPGEIIVIRILNQNQDATRHLHWS"
     gene            28585..29946
                     /locus_tag="JNZ57_000290"
     CDS             28585..29946
                     /locus_tag="JNZ57_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HAY8826635.1"
                     /translation="MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFN
                     HENLQLGINEAHALGKKFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIM
                     LVREHFPEMPIHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIEEIRNQVPDME
                     IEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHKY
                     EPIPVQNVEPTLGIGAPTDKVFMIEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVE
                     RLTKMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAAAGKPFDTSLLETLEGLAHRGY
                     TEGFLRRHTHDDYQNYEYGYSVSDRQQFVGEFTGERKGDLAAVAVKNKFSVGDSLELM
                     TPQGNINFTLENMENAKGEAMPIAPGDGYTVWLPVPQDLELNYALLMRNFSGETTRNP
                     HGK"
     gene            complement(30220..30438)
                     /gene="ogrK"
                     /locus_tag="JNZ57_000291"
     CDS             complement(30220..30438)
                     /gene="ogrK"
                     /locus_tag="JNZ57_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000468310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prophage transcriptional regulator OgrK"
                     /protein_id="HAY8826636.1"
                     /translation="MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYES
                     VQRYIVKPGEVHAVRPHPLPSGQQIMWM"
     gene            complement(30519..31682)
                     /locus_tag="JNZ57_000292"
     CDS             complement(30519..31682)
                     /locus_tag="JNZ57_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016157990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
                     /protein_id="HAY8826637.1"
                     /translation="MLDALTFDAGSTLTPDYMLMLDSRDITGNISDRLMSMTLTDNRG
                     FEADQLDIELNDADGQVGLPVRGAVLTVYIGWKGFALVCKGKFTVDEVEHRGAPDVVT
                     IRARSADFRGTLNSRREGSWHDTTLGAIVEAIASRNRLEASVAPSLAGIKIPHIDQSQ
                     ESDAKFLTRLAERNGGEVSVKMGKLLFLKAGQGVTASGKKIPQVTITRSDGDRHHFAI
                     ADRGAYTGVTAKWLHTKDPKPQKQKVKLKRKKKEKHLRALEHPKAKPVTQKKTPKVPE
                     AREGEYMAGEADNVFALTTVYATKAQAMRAAQAKWDKLQRGVAEFSISLATGRADIYT
                     ETPVKVSGFKRVIDEQDWTITKVTHFLNNSGFTTSLELEVRLSDVEYETEDDE"
     gene            complement(31682..32161)
                     /locus_tag="JNZ57_000293"
     CDS             complement(31682..32161)
                     /locus_tag="JNZ57_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000978924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8826638.1"
                     /translation="MMLALGMFVFMRQTLPHQTMQRESDYRWPSNPRIGKRDAFQFLG
                     VGEENMTLAGVLYPELTGGKLTMTTLRLMAEEGRAWPLLDGTGMIYGMYVISRVSETG
                     SIFFADGTPRKIDFTLSLTRVDESLAALYGDIGKQAESLIGKAGSMATKFTGMTGAG"
     gene            complement(32176..34623)
                     /locus_tag="JNZ57_000294"
     CDS             complement(32176..34623)
                     /locus_tag="JNZ57_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016236410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HAY8826639.1"
                     /translation="MSNNVKLQVLLRAVDQASRPFKSIRTASKSLSGDIRETQKSLRE
                     LNGQASRIEGFRKTSAQLAVTGHALEKARQEAEALATQFKNTERPTRAQAKVLESAKR
                     AAEDLQAKYNRLTDSVKRQQRELAAVGINTRNLAHDEQGLKNRISETTAQLNRQRDAL
                     ARVSAQQAKLNAVKQRYQAGKELAGNMASVGAAGVGIAAAGTMAGVKLLMPGYEFAQK
                     NSELQAVLGVVKDSAEMAALRKQARQLGDNTAASADDAAGAQIIIAKAGGDVDAIQAA
                     TPVTLNMALANRRTMEENAALLMGMKSAFQLSNDKVAHIGDVLSMTMNKTAADFDGMS
                     DALTYAAPVAKNAGVSIEETAAMVGALHDAKITGSMAGTGSRAVLSRLQAPTGKAWDA
                     LKELGVKTSDSKGNTRPVFTILKEMQASFEKNRLGTAQQAEYMKTIFGEEASSAAAVL
                     MTAASTGKLDKLTAAFKASDGKTAELVNIMQDNLGGDFKEFQSAYEAVGTDLFDQQEG
                     ALRKLTQTATKYVLKLDGWIQKNKSLASTIGIIVGGALAMIGVIGAIGLVAWPVITGI
                     NAIIAAAGAMGAIFTTVGSAVMTAIGAISWPVVAVVAAIVAGALLIRKYWEPVSAFFG
                     GVVEGLKAAFAPVGELFTPLKPVFDWLGEKLQAAWQWFKNLIAPVKATQDTLNRCRDT
                     GVMFGQALADALMLPLNAFNKLRSGIDWVLEKLGVINKESDTLDQTAARTNAATYGTG
                     GYIPATSSYAGYQAYQPVTAPAGRSYVDQSKNEYHISLTGGTAPGTQPDRQLQDALEK
                     YERDKRARARASMMHDG"
     gene            complement(34616..34735)
                     /locus_tag="JNZ57_000295"
     CDS             complement(34616..34735)
                     /locus_tag="JNZ57_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001496926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HAY8826640.1"
                     /translation="MADVAVIFHWPPSELYPMSLTELITWREKALRRSGNTNE"
     gene            complement(34768..35043)
                     /locus_tag="JNZ57_000296"
     CDS             complement(34768..35043)
                     /locus_tag="JNZ57_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001719230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HAY8826641.1"
                     /translation="MNKENVITLDNPVKRGEQVIEQVTLMKPSAGTLRGVSLAAVANS
                     EVDALIKVLPRMTAPMLTEQEVAALELPDLVALAGKVVGFLSPNSVQ"
     gene            complement(35101..35619)
                     /locus_tag="JNZ57_000297"
     CDS             complement(35101..35619)
                     /locus_tag="JNZ57_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001554312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HAY8826642.1"
                     /translation="MAMPRKLKLMNVFLNGYSYQGVAKSVTLPKLTRKLENYRGAGMN
                     GSAPVDLGLDDDALSMEWSLGGFPDSVIWELYAATGVDAVPIRFAGSYQRDDTGETVA
                     VEVVMRGRQKEIDTGEGKQGEDTESKISVVCTYFRLTMDGKELVEIDTINMIEKVNGV
                     DRLEQHRRNIGL"
     gene            complement(35632..36822)
                     /locus_tag="JNZ57_000298"
     CDS             complement(35632..36822)
                     /locus_tag="JNZ57_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001483446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath protein"
                     /protein_id="HAY8826643.1"
                     /translation="MSDYHHGVQVLEINDGTRVISTVSTAIVGMVCTASDADAETFPL
                     NKPVLITNVQSAIAKAGKKGTLAASLQAIADQSKPVTVVVRVEDGTGDDEETKLAQTV
                     SNIIGTTDENGQYTGLKALLAAESVTGVKPRILGVPGLDTKEVAVALASVCQKLRAFG
                     YISAWGCKTISEVKAYRQNFSQRELMVIWPDFLAWDTVTSTTATAYATARALGLRAKI
                     DQEQGWHKTLSNVGVNGVTGISASVFWDLQESGTDADLLNESGVTTLIRRDGFRFWGN
                     RTCSDDPLFLFENYTRTAQVLADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKT
                     NGYIVDATCWFSEESNDAETLKAGKLYIDYDYTPVPPLENLTLRQRITDKYLANLVTS
                     VNSN"
     gene            37159..37968
                     /locus_tag="JNZ57_000299"
     CDS             37159..37968
                     /locus_tag="JNZ57_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000161640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin"
                     /protein_id="HAY8826644.1"
                     /translation="MTKISERWKHNGITEGYCNICGKYGLLTKDHVPPKCAITLGPVL
                     QKTVSEFFGIQEPVKPLNAKNGSYFRTICSHCNNKVLGGLDVAIENVTKSFKEQLSRY
                     MNGMNVYPFIRIPFDSISFTKAMIGHVLSATSVEDCKKEPVDSPFYTPLKDYVLGKNS
                     SFEETHDIYYWFYPHRMHISAQSVAFMNEGHVAFICALHFFPIGFIITMKNEGTYPAH
                     STKLELEDKFLTFNMTSINYEYTTFPFVNLKGNQMYAISNGHTCVSYPIIK"
     gene            complement(38109..39386)
                     /locus_tag="JNZ57_000300"
     CDS             complement(38109..39386)
                     /locus_tag="JNZ57_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016239947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2254 domain-containing protein"
                     /protein_id="HAY8826645.1"
                     /translation="MISRWKWMLKQTFKKLWFRATLFAIVAIITALLSILFKSMIPES
                     VSVKVGAEAVDNILNILASSMLAVTTFSLSIMVTAYGSATTNVTPRATRLVVEDVTTQ
                     NVLATFIGSFLFSLVGIIALNMGAYGERGRVILFIVTLVVIALILITLLRWIQHLTSL
                     GRVGETTAKVEQAAIETFIARARNPCLGGYPWLENNEQPKGTVAVYPKKIGYVEYVDM
                     VKLSKLLTNDPRHVYLVAQPGSFIHPSTPVLYLSQGQESSISTDLLETIIVSDVRSFA
                     QDPRFCLSVMAEIACRALSPAVNDPGTAIDVIGRGVRILSAYAQNKSDEIEVKYPSVH
                     VAPLQNNDLLEDFFSPVARDGASMREIQIRVLKGLSMLSKGWPGIFAEAAQTLAFETL
                     EHATRADHIDSDRYLIKSIYYNLFSGEDSNKKP"
     gene            complement(39450..41447)
                     /locus_tag="JNZ57_000301"
     CDS             complement(39450..41447)
                     /locus_tag="JNZ57_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004119118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HAY8826646.1"
                     /translation="MSENDTTPKKSTSQVNKAVFFTSALLIFLLVAFAAVFPDVADKN
                     FKLLQQQIFTNASWFYILAVALILLSVTFLGLSRYGDIKLGPDHAQPDFSYHSWFAML
                     FSAGMGIGLMFFGVAEPVMHYLSPPVGTPETVAAAKEAMRLTFFHWGLHAWAIYAIVA
                     LILAFFSYRHGLPLTLRSALYPIIGDRIYGPIGHAVDIFAVIGTVFGVATSLGYGVLQ
                     VNAGLNHLFGVPINETVQVILIVVITGLATISVVSGLDKGIRILSELNLGLAVLLLAL
                     VLCLGPTVLLLKSFVENTGGYLSELVSKTFNLYAYEPKSSNWLGGWTLLYWGWWLSWS
                     PFVGMFIARVSRGRTIREFVTGVLFVPAGFTLMWMTVFGNSAIYLIMNQGATDLANTV
                     QQDVALALFNFLEHFPFSSVLSFIAMAMVIVFFVTSADSGAMVVDTLASGGVANTPVW
                     QRIFWALLMGVVAIALLIAGGLSALQTVTIASALPFSVILLISIYGLLKALRRDLTKR
                     ESLSMATIAPTAARNPIPWQRRLRNIAYLPKRSLVKRFMDDIIQPAMTLVQEELNKQG
                     TISHISDAAEDRIRLEVDLGNELNYIYEVRLRGYNSPTFALAALDNDEQQSEQHRYYR
                     AEVYLKEGGQNYDVMGWNQEQLINDILDQYEKHLHFLHLVR"
BASE COUNT         9642 a        11099 c        10775 g        10043 t
ORIGIN      
        1 acggaatagc aggcaaggta acaattcggc aattggctat ttttaagaat tatattaagt
       61 gtcattcaat atggttttta ggattttctt taggttgaca atatttaata ttgcgcctcc
      121 acatgcgata tttcttaaat gatgttttat tattaccact tttaattcag ggataatgtg
      181 aggttattac cctcaaataa tatgagataa atagtgctgc aacattgcat ttttgccccg
      241 atttatccat gatcgaattg tgacatttgt catacaacga ataggttttg tacttactat
      301 ggaatggatt gccgatccgt ctatctgggc cgggttaatc acgctgattg tgatcgaact
      361 ggtcctcggc attgataacc tggtctttat tgccatcctc gccgaaaaac taccgccgaa
      421 gcagcgcgac cgcgcacggg ttaccgggct gctgctggcg atgttaatgc gcctgttact
      481 gctggcgtca atctcctggc tggtcaccct gactcaaccg ctgttcagct tccgctcgtt
      541 tacctttagc gcccgcgact taatcatgct gtttggtggt ttcttcctgt tgttcaaagc
      601 cacgatggag ctgaacgaac ggctggaagg gaaagacagc aataatccca cacaacgcaa
      661 aggtgcgaag ttctggggcg tggtgacgca aattgtggta ctggacgcca tcttctcact
      721 cgactcagtg attaccgccg tcgggatggt cgaccattta ctggtcatga tggccgccgt
      781 ggttatcgct atcagcctga tgttgatggc cagcaagccg ttaacgcaat ttgttaacag
      841 tcacccgacc atcgttattc tctgcttaag cttcctgttg atgattggct ttagcctggt
      901 ggcagaaggt ttcggcttcg tcattccgaa aggctacctg tacgctgcca ttggtttctc
      961 ggtgatgatc gaggcgctca atcagttggc tatctttaac cggcgacgtt ttctttccgc
     1021 taaccagaca ctgcgccagc ggactaccga agcggtaatg cgtctgctta gcgggcaaaa
     1081 agaggatgcg gaactggacg ccgaaaccgc gtccatgctg gtggatcatg gtaaccagca
     1141 gatctttaat ccgcaggaac ggcggatgat tgagcgggta cttaatctta accagcgtac
     1201 tgtcagcagc attatgacgt cgcgccacga tattgagcat atcgatctca acgcgccgga
     1261 agaagaaatc cgccagttgc tggagcgaaa tcagcatacg cggctggtgg ttactgatgg
     1321 cgatgacgcg gaagatttgc tcggtgttgt tcacgttatc gacctgttac aacaatcact
     1381 gcgcggcgaa ccgctcaacc tgcgggtgtt gattcgccag ccgctggtgt tcccggaaac
     1441 cttgccgttg ttacctgccc tggagcagtt ccgtaatgcc cgcacacact ttgcttttgt
     1501 ggtggatgag tttggctcgg tggaagggat tgtgacatta agtgacgtca ctgaaaccat
     1561 tgccggtaac ttaccgaacg aagtggaaga gatcgacgcc cgccatgata ttcagaagaa
     1621 tgcggacggt tcctggacgg cgaatggtca tatgccgctg gaggatctgg tgcaatatgt
     1681 gccgctgccg ctggatgaaa aacgtgaata tcacaccatt gccgggctgt tgatggagta
     1741 tttgcagcgt attccaaaac ctggcgaaga agttcaggtg ggggattatt tgcttaaaac
     1801 gttgcaggta gaaagccatc gcgtgcagaa ggtgcagatt ataccgctgc gtaaggatgg
     1861 cgagatggag tacgaggtgt gatggtatcg gtcattttac ccgatgctgc gtgacgcctt
     1921 ataacttcag caatgaagcg ttgtctgtgg tacatggaca ttacagcggg ggtgtgggtc
     1981 cggctgtaaa tcgccgaatc gtttcctgta ggccggggca gcccacatgg atgtgggctg
     2041 agggcgcgtt ttacagggat gttacctcgc gcccgtaccc gatagccgaa aggaataaga
     2101 tgagggaacc gcgccagcgg cgatttaccg ccgggagccc gggttgccag ggtggtggcg
     2161 attgagccac cctggcacgt tcaccggctt gagcgttcca tagtagtgag gaacatcaag
     2221 tgaacggaac agccttcgat cttacatatt cagaatataa tggtgccgcc gcgaacgcct
     2281 gatgcgacgc tttacgcgtc ttatcaggcc tacaggacag gtcacctggt aatctacatc
     2341 ttctccagca acttcttcac atctttgcca ttgcgggaat ctttattccg ctcggcccag
     2401 tcattcaggc gacgtttcgc ttcgtcctgt agatgtttgc gcagtaactg atccacttgc
     2461 agactgtaat tgagttgctg ccagttgcca taaacccgca gcggtactgg cgtttctttg
     2521 aggaaatcaa tcagtttgct ttccccgttc cagccaccca cgacccgaat atcaaactgg
     2581 gtgtcgcagg tttgatctgc cagattcaac ataccttccc ctgtaagcgc cagcacaggc
     2641 gattgacctt gcatgtcgtt taacgtcacg acgccatcct tcaacgtcaa atcggtggta
     2701 aagcggtcaa gccgcgtcac gttatcaaag ttttcagcgg ccttcacatc accaccatta
     2761 cgttctaccg cttgctgaat catctgctgg aagttcatcc cttccatgcg cgtgtcggtc
     2821 atttcgacat gtgcctgtcc ttgccagttg tggcggaatg cgtcggcatc tatgtcagca
     2881 ccggagaaat caccagccag tgacattttt ccggtcaacg aaatcggata gttaaacgcc
     2941 ttcagaatgg taccaatctc aacgttttcc agccgtggct ggaagtttat ccgcggattt
     3001 attgatgtcg cgtccagcgt gcccggcagt gaaacctgtc caccgttaag tttgccctgc
     3061 agttgagtaa tttccagcaa acccgacttg ttggtcattt gcgtggcaac atctgtaaaa
     3121 ttcattccgc gccagcgcac gttactggcc tgcaacaaaa tatcagccgt aaagccttgc
     3181 agtccctgat aggccggttc atcaatacgc gaagaaataa ccgggcgcgg caacgttgat
     3241 tggctctgcc cctgctgcgc ggcaccgttt tcaccattcg ctgtttcatt aagcgggatg
     3301 aggttgtcaa gattcagttg cgggaattgc agcctcagct gccattccgg tttctctgtc
     3361 agcgtaacct gtgcttgccc gctcagcgta ctgtcattgg cggtcaaact aatttggtta
     3421 aatgaaaggc gtttatgtga ctcctgccac tgggcctgga aactcccctg cccctgaata
     3481 ccttgttttg gtaaatctgc accctgcaac tgccagttaa tttgttcaat agccgccgtt
     3541 aaatcatgcg gataatcaga agcatctacc gtaccgttaa gggatatcgt gagatcgcgc
     3601 tgatcgcgat taacccgccc ggagaactca aatgagccac gatgttgggg atcttgttcc
     3661 atttgcaggc ggatattgcg gattgtcacc tgctcgtcat cttcatgctg gaacaccaga
     3721 acgctgtcca ccaccttaag actggatata tcaaacgacc atccgcgatc gtctgacaga
     3781 tccggcaagg tattgtcgcg cggtgcaacc ggagcgtctt cactgcgcac cgcttccgtc
     3841 tgcggcgtca gttggatcac cgcccctttt agcatcacct gcttaatgct cagttgatga
     3901 ctcagtagtg gtaaaagcgc cacgtccagg cgcatgttgt cggcgcgaac cagtggctgg
     3961 gtcgcgccct gggcggtgag agacattcgc ccggagagga tactaagctg cggccagacg
     4021 tgccaacgca gtggcccgtc gagctgcaat tgataaccgc tacgtgcagc aacttgcttg
     4081 accatatagt cgcggaaatc attcggattc accagcaaca ctaacgcaga taacccggcc
     4141 accagcacga cctggagtat catcagcgtc gtcagaaatc gtctcatggt atcctcaatg
     4201 ggcctgaatt agtctttatc gattcggctg gctaccgcgc cctgctggtt gcgatatttc
     4261 gcatcttcac ggcggttgta aggtcgcgcc gccgggccgg aaagcggctc aaagctcagc
     4321 gcaccaatta acatgcccgg acgcagcgcc agcggcagct taccggagtt gtagaactcc
     4381 agcacaatgc aaccagacca gcccggatcg atacggtgcg cggtgacgtg caccatcagc
     4441 cccagacgcg ccagtgagga acgcccgtcc agccagccca ccagatcggc tggcagcgtc
     4501 accgactcca gcgtcaccgc cagcgccagc tctcctgggt gaagatagaa cgcctcgccc
     4561 tcgtcgagaa cgatctcatc gctcatcacg cggtcaagcg cggcgctcac ttcatctttg
     4621 ggaccgctca gatcgataaa cgctgccgtg tgaccacgga aggtacgaaa tttattgccc
     4681 aggcgtacat ccaccgtcgc gccgttaata cgctccactg gcggacgtgg gttgatcgac
     4741 aaacggcctt catcaagcca ggcttcaata tctcggtcac acagacgcat ggcattttct
     4801 cctttcgcgc atcactccct taacgccaat tacgtcaagg gcataccagg ttatcactga
     4861 acggtacaca atttatcaag cttattcaaa gaactgactt attttcgctt tcaatatatc
     4921 gatcgcgatg cggtttttcc cgccgcgcgg cacgataatg tccgcatatt gtttagaagg
     4981 ctcaatgaat tgcaggaaca tcgggcgcac ggttttttga tattgcgcca tcacggaatc
     5041 cattgaacgc ccacgctcgt taacgtcacg cttgatgcgg cgcatcaggc agatatccag
     5101 cggggtatca acgaaaatgg agaagttaag ttcgtcacgc aaacgcgcat ccgtcagcaa
     5161 caaaatgcct tcgagaatga tgaccttctt cggctcaacc gtcaccgttt ctttcatacg
     5221 cgtatgttca acatagctgt aaaccggcag gtcaattgcc gagccgcgtt tcaacgcttg
     5281 taaatgctca agcagcagac tgtgatccat cgcgctggga tggtcgtagt tggtcttaac
     5341 gcgttcttcc atcgacagat ggctttgatc tttgtaatag cagtcttcgg gaattacgcc
     5401 gatgtgttca tcaccgactt gctcacgtaa ttcacgataa agggtactgg caataagact
     5461 cttgccggaa gccgatgcgc cagcgatacc gataatgacg cactgatgag actgatcagt
     5521 catatattta gcgacctgat taacctggat gttaggaagg gggcgacgaa gcgccaaacg
     5581 cggcaattat agggatttca tccgcctgat accagtcgaa taacgttgcc gcgcgctcag
     5641 agttaattgt tgacgaagaa ttcccggtgg caaattacgt tgatcagttt tatacaaagt
     5701 aaaaaatgtt atacgcagtt gcgcaaatta tccgccttta cgtcacttta tgagcaattc
     5761 gcatataaaa tgtaaaactt ttgtactagc ataaacacag aaacgaatac tggcgacctg
     5821 gccttgcgga taaagcggta atgagcaaac aatcacagca tgtattaatt gccctgcccc
     5881 acccgctgct tcaccaggtc agtttaggtt tagtctcgtt tatcttcacc cttttctcgc
     5941 ttgagctttc gcagtttggc acccaactcg ccccactgtg gttcccgacg tccatcatga
     6001 tggtggcgtt ttatcgccat gccgggcgca tgtggccggg aattgcgctg agctgttcgc
     6061 tgggaaatat cgccgcatcc atcctgcttt tttccaccag ctcgctgaac atgacctgga
     6121 cgaccatcaa tattgttgaa gccgtggtcg gggcagtgct gctacgtaaa ttgctgccgt
     6181 ggtataaccc cttgcaaaat ctggctgact ggctgcgtct ggcactcggc agcgccattg
     6241 ttccacctct gttggggggt gttctggttg tcctgctgac gcccggagac gatcctctca
     6301 gggcattttt gatatgggta ctgtcagaat ccatcggcgc tctggcactg gtgccgctgg
     6361 gattgttatt taaaccacac tatctgctgc gccatcgcaa cccacggttg ctttttgagt
     6421 cgctgctcac gttagccatc acactgacgt taagctggct ttcgatgctg tatctgccgt
     6481 ggccttttac tttcattatt gtgctgttga tgtggagcgc cgtgcgcctg ccacgaatgg
     6541 aagccttttt gatcttcctt accacggtga tgatggtgtc gctgatgatg gccgcggatc
     6601 cctccctgct tgctacgccg cgtacgtacc tgatgagcca tatgccgtgg ctaccgtttt
     6661 tgctgatcct gctgcccgcc aacatcatga ccatggtgat gtatgccttt cgtgcggaac
     6721 gcaaacacat ttccgaaagc gaaacccgtt ttcggaacgc gatggaatat tccgctatcg
     6781 gcatggcgtt agtgggcacc gagggacaat ggctgcaatc caacaaagca ctctgccagt
     6841 ttctcggtta cagtcaggaa gagctgcgcg gactcacctt ccagcaactg acctggccgg
     6901 aggatctcaa taaagatctc caacaggttg aaaagctgat aagcggtgaa ataaacacct
     6961 attcaatgga aaaacgttac tacaaccgca atggcgatgt tgtctgggcg ttgcttgccg
     7021 tctcactggt gcgccacacg gatggcacgc cgctctattt tatcgctcag attgaagaca
     7081 ttaacgagct aaaacgcacc gaacaggtca atcagcaact gatggagcac atcacgctgg
     7141 ctaacgaagc gggcgggatt ggcatctggg agtgggagtt gaagccgaat atttttagct
     7201 gggataagcg gatgttcgag ctgtatgaaa ttcctccaca tatcaaaccg aactggcagg
     7261 tgtggtacga gtgcgtgctg ccggaagatc gccagcatgc cgaaaaagtg attcgtgatt
     7321 cgttgcaatc atgctcgccc tttaaactgg aatttcgcat taccgtaaaa gacggtattc
     7381 gccatatccg cgccctcgcc aaccgggtac tgaataaaga aggcgaagtc gaacgcctgc
     7441 tcggcattaa tatggatatg actgaggtta aacagcttaa cgaggcattg tttcaggaaa
     7501 aagagcgcct gcacattacg ctggactcca tcggcgaagc cgtggtctgt attgatatgg
     7561 cgatgaaaat tacctttatg aatccagtgg cggagaagat gagcggctgg acgcaggaag
     7621 aagcgttagg tgttccgctc ctgacggtgt tgcatattac ttttggcgac aacggaccat
     7681 taatggagaa catttacagt gccgacacct cacgttccgc gatcgaacaa gatgtggtgt
     7741 tgcactgtcg gagcggcggc agttacgacg tgcattacag tattacgccg ttaagtactc
     7801 tggacggcag caatattggt tcggttctgg tgattcagga cgttaccgaa tcacgcaaaa
     7861 tgctgcgcca gctgagctac agcgcctccc atgatgcact gacgcatctc gccaaccgcg
     7921 ccagttttga gaaacaactg cgtatcctgc tgcaaacggt aaacagtacg catcagcgac
     7981 atgcactggt gtttatcgat cttgatcgct ttaaagcggt gaatgacagc gccgggcatg
     8041 cggcgggcga cgctttgctg cgcgaactgg cgtcgttgat gctgagtatg ctgcgctcca
     8101 gtgacgtgct ggcgcggctc ggcggtgatg aatttggtct gctgctgcca gactgcaatg
     8161 ttgaaagcgc tcgttttatc gctacacgta ttatcagtgc tgtgaatgac tatcacttta
     8221 tatgggaagg ccgggtacat cgggtaggtg ccagcgccgg gattaccttg atcgatgaca
     8281 ataatcatca ggcggcagaa gtgatgtcgc aggctgatat cgcctgttat gcctccaaaa
     8341 atggtggccg gggccgggtg acggtttacg aaccgcagca agctgccgca catagcgaac
     8401 gggcggcgat gtcgcttgat gaacagtggc ggatgattaa agagaatcag ttgatgatgc
     8461 tcgcccacgg tgtcgctttg ccacggatcc cggaagcgcg taatttgtgg ctgatttcac
     8521 ttaagctctg gagttgcgaa ggcgagatta ttgatgaaca aacatttcgt cgtagcttca
     8581 gcgatccggc gcttagccat gctcttgacc cacgaatttt tccagcaggc cgcaaaagcg
     8641 gttgccagta aaggcataag catcgccctc cccctttccg ttgccggttt gagtagcgcc
     8701 acgctggtga atgatctgct tgagcagctg gaaaacagcc ctctaccacc acggttatta
     8761 catctgatta ttccggctga agcgatttta gagcacgcag aaagcgtgca aaaactgcgg
     8821 ctggcgggat gtcggatagt gctcaaccag gtgggccgcg atctgcaaat cttcaactcg
     8881 ctgaaagcga atatggcaga ttacctgcta cttgatggtg agttatgcgc caacgtgcag
     8941 ggtaatttga tggatgagat gctgattacg attattcagg ggcacgctca gcgactcggg
     9001 atgaaaacca tcgccgggcc agtcgtttta cccttagtga tggatacgct ttctggcatc
     9061 ggcgtcgatc tgatttatgg tgatgtgatt gccgatgccc aaccgctgga tttgctggtg
     9121 aatagtagtt atttcgcgat taactgaggc gtgcttcccc atcgcctgat gcgacgctaa
     9181 cgcgtcttat catgcctaca aatcgctcat tccccaggcc ggataaggcg ctcgcaccgc
     9241 atccggcgac caacgtcatg cttcgtctgg ttgccagcct tccgtatacc agatatgcaa
     9301 cagcgcataa gaacgccagg gcttccagcg ttcggcataa cggcggattt gcgccggtgt
     9361 cattcccgga aattgctgtt taatcagata atcatccggc aggaaaacat ctttcgcctg
     9421 ccagccacgc aaagcgaaat aattcgccgt ccagcgtccg atatccggaa aagtttgcag
     9481 cgttttcatc gcttgttcta cgtcgcccgg tattgtcatt ggtaagctgc cctccagcgc
     9541 cgcatttgcc agatgaatca gcgcctctgc ccgtttcaat ggcatgccta acgcttttaa
     9601 tgcctgcggg tcggctgctg ccagccgctg aggcgtgggg aagcagatat actccggaaa
     9661 atcatccagc cgttcgccat aaagctgtac cactttggcg gtcaattttg ccgccatcgc
     9721 cacgctcacc agttggccta aaatcgcccg cacgccctgc tcaaaagcat caacactgcc
     9781 gggtaaacgc aatccgggcc gcgccgcgcc taacttgccc aacgcaccgt taacaatctg
     9841 cgggttacat tgcagatcaa gcaggcggct cattttcgcc agacactcag cggcaacggg
     9901 ttctaaacct gcacttaaat ttatgtgcag agtatggcgg gctatatccg gaatagcagt
     9961 caccacgccg cgatattcgc ccaccgccag actacgggca taataatcgt cagcgaccgt
    10021 ttccacacca ctcactgcac gggcggcgag aaatcccaac atccacgacc agtcatacgg
    10081 cggctgccag ttcagggtat acatcgcatc tccttattca tccgctttca gcataaacgt
    10141 tattcagacg ctgcgctttg ctttcatatt ccggttgtcg cgacggcaac atttcgctaa
    10201 agtcacgccc cttcttcacc ggcatgggga ttatttcgtg tttattggtt ttgattacgg
    10261 tacagcaaac tgttcagtgg cgatcatgcg tgacggtaaa ccgcacttgc taaaaatgga
    10321 aaacgacagc acgctgctgc cttcaatgct ttgcgcgcca acgcgtgagg cggtaagcga
    10381 atggctgtac cgccatcatg atgttccggc agacgacgat gaaacgcagg cgctgttacg
    10441 tcgggcgatt cgttataacc acgaagaaga tatcgatgtt acggcgaaaa gcgtgcagtt
    10501 cggtctttcc tcactggcac agtacattga tgatccggaa gaagtgtggt ttgtgaaatc
    10561 accaaaatcg ttcctcggtg ccagcggctt aaaaccgcag caggtagcgc tgtttgagga
    10621 tctggtctgc gcaatgatgt tgcacattcg ccagcaggcg caggcacagc tgccagaaac
    10681 gattactcag gcggtgattg gtcgcccgat caactttcag ggtctgggcg gtgatgaagc
    10741 aaacacccag gcgcaaggga ttctggaacg cgcggcgaag cgtgccggat tcagggacgt
    10801 ggtattccag tacgagccgg tagcggctgg gctggattac gaagccacct tacaggaaga
    10861 aaaacgggta ctggtggtgg atatcggcgg tggtacgact gactgttcat tgctgctgat
    10921 ggggccgcag tggcgttcgc gtctcgatcg tgaagccagc ctgctgggtc acagtggtta
    10981 ccgtattggc ggtaacgatc tggatatcgc actagcgttt aaaaacctga tgccactgct
    11041 gggtatgggg ggcgaaaccg aaaaaggcat cgccctgccg attctgccgt ggtggaatgc
    11101 ggtggccatc aacgacgtac ctgcgcagag tgatttctac agtagtgcca acggtcgtct
    11161 gcttaacgat ctggtacgcg atgcccgcga accggaaaaa gtggccctgc tacagaaaat
    11221 ctggcgtcag cgtttaagct atcgcctggt gcgtagcgca gaagagtgca aaattgctct
    11281 ttcaagcgta gcggaaaccc gcgcctcact gccgtttatc agcgatgaac tggctacgct
    11341 gattagccag caagggctgg aaagcgccct cagccagcca ctggcgcgga ttctggaaca
    11401 ggtgcaactg gccctggata acgcccagga aaaaccggat gtcatctacc tgaccggcgg
    11461 tagcgcccgt tcgccgctga ttaaaaaagc gctggcagaa cagttgccgg gcattccgat
    11521 tgcaggcggc gatgactttg gctccgtcac cgccgggctg gcacgctggg cggaagtggt
    11581 gtttcgttaa ttgaaaaatg gctcagcagc gacttaaatc tgcctgcgcc tgagccagtt
    11641 tttctgccgc ctgacgtaac ggttccatca acggcatggt ccgtgctgga gcatgaaggc
    11701 ggaatcgctg caactctgtc gcgccgacag tcaacgccaa ttccagccga tgtcgtttgg
    11761 cggccatttt cgccattacc gcttgtcttt ctgcaggcgt taccgcttcg ttcggcctga
    11821 acacaaaacg gcgttcacag ctcgctttcc agtcgatgac cgcctgggtc agatgatcac
    11881 caaacccttt aacttgctta accccacgac gggtaacatc cgctgctgtt tcaataccaa
    11941 aggaccgtaa cgccgcttta cgcgcagggc caacgccggg aatagaggca acatcaataa
    12001 aaaatccctc cagaaacttc tgcttctgcc gttcccttgc ggtgtcgtga agtgctgcca
    12061 gagcacgttt ttcttcttcc ggtaacccga gaatttcgtc cttcattttt tcgagcatcg
    12121 tccgtttggc gataaaacct tccagcccgc ccaactgttg gctctggctg actaaatggt
    12181 catagtccat tttcgcgcga ttaaatgcct cacggcgttg ctgaacttct gctttgtacg
    12241 ctttgcttgt cagactgcca ataatccaga tagccgccag cacaggaacc aaaataatat
    12301 aacgcggttc tgcctgaagg ccgcaaagca gcagcgataa cgctgacagt gcgatctcaa
    12361 tcagaatgat gtattcgcgc cgtaacaggc ctaaaggaag cggcctgcca gtcggttgga
    12421 aatgatcggg taatggcagt tgcaatgctg gcggcgctac tgacgccatc accatcgccc
    12481 agactttcgc cagcacaaaa tcaccgccgg tggtaatgac ctcttcgccg agatcaataa
    12541 aatagataac gccttgatta tccagcgtac accacgggca gtcggtcaaa tgagcgggat
    12601 aaacatgcat tgccgaaacg gtacatttct ttaactgttg gcgtagagaa tccagtgctg
    12661 ctacccacgc tttagccgtc ggacgcccgg ttgctacgcc actttccgta aacgcctgct
    12721 gaaacatggc ttcaacatcg cccggtaaca tcgacagcgg aatcgatcgt ggcggcggtt
    12781 ttaaaccacg tcgctggttg tctgacgcgt aggcataacg gaaatgggca atatccgtct
    12841 ccagcgcatt acccgcatca gagataagcg gcacaccaga ataaggatgc cgcccaccaa
    12901 acaagacgtg aaaaatcagc aacgcaaggc caaaattatc gtgattcgcg gtacgttcaa
    12961 aaccgacaaa tgatggcaag gtttgtagct ctggcggcgt aaaatgcgac acgccgactt
    13021 cgcataaatg cagtgtgcca ttggcgttaa tctgaaagga gtcactatcg atcaacacca
    13081 ctttgctgtc gcgacctacc ataaagctgt tctggtttac gtcccccacg acgtgcccgt
    13141 gctcgtgaac cgtagcaaaa gatgaagcaa tattgcgcgc aacatagagt agaaaatccc
    13201 acgcacaatg agggtaactc tggcgacgat gtgccgggct atagatcata tgaatcggtt
    13261 ctttaccaga aacttttggc atcataaaac cgataacctt tccgcctcgc ccaccgtgaa
    13321 gcgttgcctg cggccaggcg acataattca acaactgcgc gtcagctgtc gcagccataa
    13381 aggcaagttt gtcctgtttt aaggcgggtg gcggcgtgtg ataaatcttg gcgacgctat
    13441 cgacaaactc attgatatca taaaccgcgc cttcgccacc tttgcccagt tcacggcctg
    13501 gcgtaacgca ctcaccagta gcagtatata aagtgggttt catggtaacc acagcgccag
    13561 tgccaacgtt ttatcatcat cggtacgctc gtttaccgcc gggctggaca aaaactgctt
    13621 taacaattca ggtaataaat cgagttgttc ctgcgttgct gccgccagtc cattgaaaaa
    13681 cggggtaaag aaaggcacat gcggagaatt atccagcata tttaacgcca gtcgctgaat
    13741 accatccgta aatgctgcaa ctttatgcgc acgctcagtg ctggtgaaag tttccagtct
    13801 ggaaacagca tcttcatcgc taatgaaatg cgtcatattg gcatattcac ccaccatcgg
    13861 cgtgagcggc agttccagac cacgaccaaa atccaccact acaccgccgt cgccaatttg
    13921 cataatcaat gtgccgttag ccgatgaaat caatcccaga aacgtgcagg caaaatcgcg
    13981 aactgctaat gctttggctt ctgcctcggc aaaaagtcgt tgacgaatgg tcagtaccat
    14041 atttgtggcg aggacatcat taagccccaa ttcaccgtcc tgtacttttt gcaccataaa
    14101 cgccatcgct tcattgacgg cgagcttcgc gccttctcct ccctgcgaaa cgctacctgc
    14161 gccatcagca aggaacatca ccagtaatgg ctgctggtca tttagccagg caacctgcat
    14221 ctggcaggca tcctgacaag gtaaatcagc gctaatgtgc gacgttccaa cagcggatgc
    14281 ataaaccaga cgccagctca cactgacgtc cagccttttg gcgcttccag cacaacttcc
    14341 gttcccggcg tggagcggga aaccgaacgc agcgaactgg ataaccagct aaacagttca
    14401 cggaattgta atccctgcag tggcaaaggc tgacgaacgc tgatttgtgc cagagtcttc
    14461 atatccgccc cctgaacacc gatggaaaag aaggcaaact tcttatcttc ttccccctga
    14521 aacactttgt tggcggcagc ctgccactca tcggttggag cgccatcggt gatcaggaaa
    14581 atccacgggc gataatacga aataccattt gcacgatact cacgtttccg ctcctctacc
    14641 atatccaggg ctttggtaat ggcagcgccc attggtgtat cgccctgggc aaacaggatg
    14701 ggcgggaaaa aattagcggc gctggtaaag ggttgttcca catgcaccgg gccgaacgtc
    14761 acaatgccga gttcaactct ttttaaggcc agcgaatcgg caagcagctc atcgcgaaag
    14821 gtaaccaatc cggcgttaag ttcattaatg ggtctaccgt tcatagaacc agaaacatcc
    14881 agcagcaaaa tgcaggggca acgtggttcc gggttactgg caaaatcgct ggtggcaaac
    14941 gtgatttgtt cgctcataag aaatcctttc ttagagaatt attgaggtcc ggtatcatac
    15001 cgactgcaat aatgaaataa gagcaaacga agaaactttc agaattagtc ccggcggcgc
    15061 agaaaatttt gctattcgcc tcgcaagaac ggagagccgt cgattgacac taagggcgga
    15121 gtgacataat ttcaggagtg agggttaggg agaggtttcc ccctccccct ggggttctta
    15181 gtaagcctgg aagctaatca ctaagagtat caccagtatg atgacgtgct tcatcatacc
    15241 cctttcctta ttaaaagccc tcttctccgg gagagggttt cccgtttcag cgtcccgctg
    15301 aaatcttcgg cttacctcct ttcgccctgt atgcagtcta tcgctgactt gcggataaaa
    15361 tagtttccag tgtgattatt gcgtaacgac tcgcaaagaa tatttgctgg caggatcgca
    15421 gactgcaaag cctgcggatt gacaatctta tcgtgaaggc atactttcag cagtgagggt
    15481 tgagcggggt ttcccccgcc ctggtagtct tagtaagctg gccagctaat gactaagagc
    15541 accacgatga tgagtagcct catcatgacc ctttccttat ttaaggcccc ttcctcggga
    15601 ggggctttca cgtttcagca tcccgctgaa atcttcggct tacctccttt cgccctgtat
    15661 gcagtctatc gctgacttgc ggataaaata gtttcaagtg tgattattgc gtaacgactc
    15721 gcaaagaata tttgctggca ggatcacaga ctgcaaagcc tgcggattga cattctgaac
    15781 gtgaaggcat actttcagga gtgagggtag agcggggttt cccccgccct ggtagtctta
    15841 gtatgctggg tagctaatca ctaagagcac cacgatgatg agtatcttca tcatgaccct
    15901 ttccttattt atggcccctt cctcgggagg ggctttcccg tttcagcgtc ccgctgaaat
    15961 cgtcggctta cctcctttcg ccatgcaagc agtctatcgc taacgcgtag ataaaatagt
    16021 ttcctgtgtt attactggat gcgtgctcgc aaatgtgccc gccattcaga cgattcccga
    16081 tagtgtttca taattcctcc atttttctcc cttattggct ggctacacta gtatcattcc
    16141 gcgaaacgtt tcaggaagag aaactcttaa cgatgaaagg cagttataaa tcccgttggg
    16201 taatcgtaat cgtggtggtt atcgccgcca tcgccgcatt ctggttctgg caaggccgca
    16261 atgactccca gagtgcagcc ccaggggcga cgaaacaagc gcagcaatcg ccagcgggtg
    16321 gtcgccgtgg tatgcgttcc ggcccattag ccccggttca ggcggcgacc gccgtagaac
    16381 aggcagttcc acgttacctc accgggcttg gcaccattac cgccgctaat actgttacgg
    16441 tgcgcagccg cgtggatggt caactgatgg cgttacattt ccaggaaggc cagcaggtca
    16501 aagcaggcga tttactggca gaaattgacc ccagccagtt caaagttgca ttagcacaag
    16561 cccagggcca actggcaaaa gataaagcca cgcttaccaa cgcccgccgt gatctggcgc
    16621 gttatcagca actggcaaaa accaatctcg tctcccgcca ggagctggat gcccaacagg
    16681 cgctggtcag tgaaaccgaa ggcaccatta aggctgatga agcaagcgtc gccagcgcgc
    16741 agctgcaact cgactggagc cgcatcaccg caccagtcga tggtcgcgtt ggtctcaagc
    16801 aggttgatgt tggtaaccaa atctccagtg gtgataccac cgggatcgtg gtgatcaccc
    16861 agacgcatcc tatcgatttg ctctttaccc tgccggaaag cgatatcgct accgtcgtgc
    16921 aggcgcaaaa agccgggaaa ccgctggtgg tagaagcctg ggatcgcacc aactcgaaga
    16981 aattaagtga aggcacgctg ttaagtctcg ataaccaaat cgatgccact accggtacga
    17041 ttaaagtgaa agcacgcttt aataatcagg atgatgcgct gtttcccaat cagtttgtta
    17101 acgcgcgcat gttagtcgac accgaacaaa acgccgtagt gatcccaaca gccgccctgc
    17161 aaatgggcaa tgaaggccat tttgtctggg tgctgaatag cgaaaacaag gtcagcaaac
    17221 atctggtgac gccgggcatt caggacagtc agaaagtggt gatccgtgca ggtatttctg
    17281 cgggcgatcg cgtggtgaca gacggcattg atcgcctgac cgaaggggcg aaagtggaag
    17341 tggtggaagc ccagagcgcc accactccgg aagagaaagc caccagccgc gaatacgcga
    17401 aaaaaggagc acgctcctga tgcaggtgtt acctccgagc agcacaggcg gcccgtcgcg
    17461 cctgtttatt atgcgtcctg tcgccaccac gctgctgatg gtggcgatct tactcgccgg
    17521 gattatcggt tatcgcgccc tgcccgtttc ggcgctgccg gaagtggact atccgaccat
    17581 tcaggtggtc acgctctacc caggtgcgag cccggatgtc atgacctctg ccgttaccgc
    17641 gccgctcgaa cgccagttcg ggcagatgtc tggcctgaaa cagatgtcgt cgcaaagttc
    17701 cggcggtgcg tcagttatca ccttacagtt ccagctaaca ttaccgctgg atgtcgccga
    17761 gcaggaagtg caggccgcga ttaacgctgc gaccaacttg ttgccgagcg atctgcctaa
    17821 cccgccggtt tacagcaaag tgaacccggc agatccgccg atcatgacgc tcgccgttac
    17881 ctcaaccgcc atgccgatga cgcaagtgga agatatggtg gaaacccgcg tcgcgcagaa
    17941 aatctcgcag atttccggcg tcggcctggt gacgctttcc ggcggccagc gtccggctgt
    18001 tcgcgtcaaa cttaacgctc aggcgattgc cgccctcggc ctgaccagcg aaaccgtgcg
    18061 caccgccatt accggcgcta acgttaactc ggcaaaaggt agcctcgacg gcccttcccg
    18121 cgcggttacg ctttccgcga atgaccaaat gcaatctgcg gaagaatatc gccagttgat
    18181 tatcgcctac cagaacggcg cgccgattcg tctgggcgat gtcgcaaccg tagagcaagg
    18241 tgtagaaaac agctggctcg gcgcatgggc gaacaaagaa caggccattg tgatgaatgt
    18301 tcagcgccag cccggtgcta acattatctc caccgccgac agcatccggc agatgctgcc
    18361 acagctcacc gagagtttgc cgaaatcggt ggaggtgacg gtactttctg accgtaccac
    18421 caatatccgc gcatccgtcg acgatactca gtgtgaattg atgatggcta tcgcgctggt
    18481 agtaatgatt atctacctgt ttttgcgcaa tattccggcg accatcattc ccggcgtcgc
    18541 agtgccgctg tcgttaatcg gcaccttcgc ggttatggtg tttctcgatt tttcaatcaa
    18601 taacctgacg ctgatggcgt taactatcgc caccgggttc gtggtcgatg acgccatcgt
    18661 ggtgatcgaa aatatttccc gctatatcga aaaaggcgaa aaaccgttgg cggcggcgct
    18721 caaaggcgca ggtgaaatcg gctttaccat tatctcgctg accttctcgc tgattgcggt
    18781 gttgatccca ctgctgttta tgggcgatat cgtcgggcga ctgttccgcg aatttgctat
    18841 taccctggcg gtagcgattt taatctcagc cgtggtgtcg ctaaccctga caccgatgat
    18901 gtgcgcacgg atgctcagcc aggagtcgtt gcgtaaacag aaccgcttct cccgtgcctc
    18961 ggaaaaaatg ttcgacagga taatcgccgc ctatggtcgt ggactggcga aagtgctgaa
    19021 tcatccgtgg ctgaccttaa gcgtggcgct cagcacgctg ctgcttagcg ttctattgtg
    19081 ggtgttcatt ccgaaaggtt tcttcccggt acaggataac ggcattattc agggcacttt
    19141 gcaggcaccg caatccagct cctttgccaa tatggcccag cggcaacgcc aggtcgcgga
    19201 cgtgattttg caggatccgg cagtgcaaag tctgacctca tttgttggcg ttgatggcac
    19261 taacccgtcg ctgaacagtg cgcgtttgca gatcaacctc aaaccgctgg atgaacgtga
    19321 tgatcgggtg caaaaagtca tcgcccgtct gcaaacggcg gtggataaag tgccgggcgt
    19381 cgatctcttc ctgcaaccaa cgcaggacct gaccatcgat actcaggtca gccgcaccca
    19441 gtaccagttt accttgcagg ccacgtcact ggatgcgctc agtacctggg tgccacagtt
    19501 gatggaaaaa ctccagcaac tgccacagct ttctgatgtc tccagcgact ggcaggacaa
    19561 agggctggtg gcgtatgtca atgttgatcg tgacagcgcc agccgtctgg ggatcagcat
    19621 ggcagatgtc gataacgccc tgtacaacgc gtttggtcag cggctgattt ccactattta
    19681 tactcaagcc aaccagtatc gcgtggtgct ggaacacaac accgaaaata ccccaggcct
    19741 cgcggcgctg ggtaccattc gcctgaccag cagcgacggt ggcgtggttc cgctaagttc
    19801 gattgccaaa attgagcagc gttttgcacc gctctccatc aaccatctgg atcagttccc
    19861 ggtaacaacc atctccttta acgtgccgga taattattcg ctgggcgatg cggtgcaggc
    19921 gattatggac actgaaaaga cgctgaatct accggtggat atcaccacgc agttccaggg
    19981 ctgcaccctc gccttccagt cggcgctggg cagcactgtc tggctgattg tcgcagcggt
    20041 ggtggcgatg tatatcgtgc tcggcattct gtacgagagc tttattcatc caatcaccat
    20101 tctctcgacg ttgcccacgg caggtgttgg cgcactgctg gcgttaatga ttgccggtag
    20161 cgaactggat gtgattgcga ttatcggcat tattttgctg atcggtatcg tgaagaaaaa
    20221 cgccatcatg atgatcgact tcgcgctggc tgccgagcgc gagcaaggca tgtcgccgcg
    20281 cgatgcaatc taccaggctt gtctgctgcg ttttcgtccg atcctgatga ccaccctggc
    20341 ggctctgctt ggcgcgctgc cgctgatgtt gagtaccggg gtcggcgcgg aactgcgtcg
    20401 tccgttaggc attggtatgg tcggtggtct ggttgtcagc caggtactga cgctgtttac
    20461 cacgccagtg atttatctgc tgttcgaccg cctggcattg tggactaaaa gccgctttgc
    20521 ctgtcatgaa gaggaggcgt aagtgaagtt ttttgccctc ttcatttacc gcccggtggc
    20581 gacgatttta ctgtcggtcg ccattaccct gtgcggcata ctgggcttcc gtatgctgcc
    20641 ggtcgccccg ctgccgcagg tcgattttcc ggtgattatg gtcagcgcct cgctgcccgg
    20701 tgcgtcgccg gagacaatgg cgtcttccgt tgccacgccg ctggagcgtt cacttgggcg
    20761 cattgtcggg gtcagtgaaa tgacctccag cagttcgctc ggcagcacgc gtattatttt
    20821 gcagtttgat tttgaccggg atatcaacgg tgcggcgcgt gatgtgcagg cggcgatcaa
    20881 cgccgcacaa agtctgctgc ccagtgggat gcccagccgc ccgacttatc gcaaagcgaa
    20941 cccgtcggat gcgccaatta tgatcctcac gctaacctcc gatacttatt cgcagggtga
    21001 attgtacgat ttcgcctcga cgcagctggc tccgacgatt tcgcaaatcg acggtgtcgg
    21061 tgatgtcgat gtcggcggca gctcgctgcc cgccgtgcgc gtcgggctga acccgcaggc
    21121 gctgtttaat cagggcgtgt cgctggatga cgtacgcact gccatcagca atgccaacgt
    21181 gcgtaaaccg cagggggcac tggaagatgg cactcaccgc tggcagatcc agaccaatga
    21241 tgagctaaaa accgccgctg aatatcagcc gttgattatt cactacaaca acggcggcgc
    21301 ggttcgtctg ggcgatgtgg cgacggtgac cgactcagtg caggatgtgc gcaacgccgg
    21361 gatgaccaac gccaaaccgg ctattttgct gatgatccgc aagctgccgg aagccaatat
    21421 tatccagacg gttgacagca tccgggcaaa attaccggag ttgcaggaaa ccattccggc
    21481 ggcgattgat ctgcaaattg cccaggatcg ctcccccacc attcgcgcct cgctggaaga
    21541 agtcgagcaa acgctgatta tctcggtggc gctggtgatt ctggtggtgt ttttattcct
    21601 gcgctcgggt cgcgccacta ttattcccgc cgttgcggtg ccggtttcgc tgattggtac
    21661 gtttgcggcg atgtacctgt gcggattcag tctcaataac ctttcgttaa tggcgctcac
    21721 catcgctact ggtttcgtgg tggatgacgc catcgtggtg ctggaaaaca ttgcacgtca
    21781 tctggaagcg ggaatgaaac cgttgcaagc cgcactgcaa ggtactcgcg aagtcggttt
    21841 tacggtgctg tcgatgagtc tgtcactggt ggcggtgttc ctgccgctgc tgttgatggg
    21901 cggattgccg ggccgactgt tacgcgagtt tgccgtgacg ctttctgtcg ccattggtat
    21961 ttcgttgctg gtttccctga cgctaacgcc aatgatgtgt ggctggatgc tgaaagccag
    22021 caagccgcgc gagcaaaagc gactgcgtgg ttttggccgc atgttggtag ccctgcaaca
    22081 aggctatggc aagtcgctga aatgggtgct caatcatacc cgtctggtgg gcgtggtgct
    22141 gcttggcacc attgcgctga atatctggct gtatatctcg atcccgaaaa ccttcttccc
    22201 ggagcaggac actggcgtgt tgatgggcgg gattcaggcg gatcagagta tttcgtttca
    22261 ggcgatgcgc ggtaagttgc aggatttcat gaaaattatc cgtgacgatc cggcagtgga
    22321 taatgtcacc ggctttacag gcggttcgcg agtgaacagc gggatgatgt ttatcaccct
    22381 caagccacgc gacgaacgca gcgaaacggc gcagcaaatt atcgaccgtc tgcgcgcaaa
    22441 actggcgaaa gaaccggggg cgaatctgtt cctgatggcg gtacaggata ttcgcgttgg
    22501 tgggcgtcag tcgaacgcca gctaccagta cacgttgtta tccgacgacc tggcggcact
    22561 gcgcgaatgg gagccaaaaa tccgcaaaaa actggcgacg ttgccggaac tggcggacgt
    22621 gaactccgat cagcaggata acggcgcgga gatgaatctg gtttacgacc gcgacaccat
    22681 ggcacggctg ggaatcgacg tgcaggccgc caacagcctg ttaaataacg ccttcggtca
    22741 gcggcaaatc tcgaccattt atcagccgat gaaccagtat aaagtggtga tggaagtgga
    22801 tccgcgctat acccaggaca tcagcgcgct ggaaaaaatg ttcgtcatta ataacgaagg
    22861 caaagcgatc ccgctgtcgt atttcgctaa atggcaaccg gcgaatgccc cactatcggt
    22921 gaatcatcag ggattatcgg cagcctcgac catctcgttc aacctgccga ccggaaaatc
    22981 gctctcggac gccagtgcgg cgatcgatcg cgcaatgacc cagcttggtg tgccttcgac
    23041 ggtgcgcggc agttttgccg gcacggcgca ggtgttccag gagacgatga actcacaggt
    23101 gatcctgatt atcgccgcca tcgccacggt gtatatcgtg ctgggtatcc tttacgagag
    23161 ttacgtacat ccgctgacga tcctctccac cctgccctcg gcgggcgttg gagcgctgct
    23221 ggcgctggag ctgttcaatg ccccgttcag cctaatcgcc ctgataggga tcatgctatt
    23281 aatcggcatc gtgaagaaaa acgccattat gatggtcgat tttgcgcttg aagcccaacg
    23341 gcacggtaac ctgacgccgc aggaagctat tttccaggcc tgtctgctgc gttttcgccc
    23401 gattatgatg actaccctgg cggcgctgtt tgacgcgctg ccgctggtgt tgtcgggcgg
    23461 tgacggctcg gagctgcggc aacccctggg gatcaccatt gtcggcggac tggtaatgag
    23521 ccagctcctt acgctgtata ccacgccggt ggtgtatctc tttttcgacc gtctgcggct
    23581 gcgtttttcg cgtaaaccta aacaaacggt aaccgagtaa atgacagatc ttcccgacag
    23641 cacccgttgg caattgtgga ttgtggcttt cggcttcttt atgcagtcgc tggacaccac
    23701 catcgtaaac accgcccttc cctcaatggc gcaaagcctc ggggaaagtc cgttgcatat
    23761 gcacatggtc attgtctctt atgtgctgac cgtggcggtg atgctgcccg ccagcggctg
    23821 gctggcggac aaagtcggcg tgcgcaatat tttctttacc gccatcgtgc tgtttactct
    23881 cggttcactg ttttgcgcgc tttccggcac gctgaacgaa ctgttgctgg cacgcgcgtt
    23941 acagggcgtt ggcggcgcga tgatggtgcc ggtcggcaga ttgacggtga tgaaaatcgt
    24001 accgcgcgag caatatatgg cggcgatgac ctttgtcacg ttacccggtc aggtcggtcc
    24061 gctgctcggt ccggcgctcg gcggtctgct ggtggagtac gcgtcgtggc actggatctt
    24121 tttgatcaac attccggtgg ggattatcgg tgcgatcgcc acattgctgt taatgccgaa
    24181 ctacaccatg cagacgcggc gctttgatct ctccggattt ttattgctgg cggttggcat
    24241 ggcggtatta accctggcgc tggacggcag taaaggtaca ggtttatcgc cgctgacgat
    24301 tgcaggcctg gtcgcagttg gcgtggtggc actggtgctt tatctgctgc atgccagaaa
    24361 taacaaccgt gccctgttca gtctgaaact gttccgtact cgtacctttt cgctgggcct
    24421 ggcggggagc tttgccggac gtattggcag tggcatgttg ccctttatga caccggtttt
    24481 cctgcaaatt ggcctcggtt tctcgccttt tcatgccgga ctgatgatga tcccgatggt
    24541 gctcggcagc atggggatga agcgaattgt ggtacaggtg gtgaatcgct ttggctatcg
    24601 tcgggtactg gtggcaacca cgcttggcct gtcgctggtc accctgttgt ttatgactac
    24661 cgccctgctg ggctggtact acgttttgcc gttcgtcctg tttttacaag ggatggtcaa
    24721 ctcgacgcgt ttctcctcca tgaacaccct gacgctgaaa gatctcccgg acaatctggc
    24781 gagcagcgga aacagcctgc tgtcgatgat tatgcaattg tcgatgagta tcggcgtcac
    24841 tatcgccggg ctgttgctgg gactttttgg ttcacagcat gtcagcgtcg acagcggcac
    24901 cacacaaacc gtctttatgt acacctggct tagcatggcg ttgatcatcg cccttccggc
    24961 gttcatcttt gccagagtgc cgaacgatac gcatcaaaat gtagctattt cgcggcgaaa
    25021 aaggagcgcg caatgaagtt ctggcgaccc ggtattaccg gcaaactgtt tctggcgatt
    25081 ttcgccacct gcattgtctt gctgatcagt atgcactggg cggtgcgtat cagttttgag
    25141 cgtggcttta ttgattacat caagcatggt aatgaacagc gattacaact gttaagtgat
    25201 gcgcttggcg agcagtatgc gcagcatggc aactggcgct tcctgcgcaa caatgatcgc
    25261 tttgtctttc agatcctgcg ttcatttgaa cacgataatt cggaagataa acccggcccg
    25321 ggtatgccac cgcacggctg gcgtacccag ttctgggtgg ttgatcaaaa caacaaagtg
    25381 ctggttggtc cgcgagcgcc gattccacct gacggtacac ggcgacccat tctggtcaac
    25441 ggtgcggaag ttggcgcggt gatcgcctcc cccgttgagc ggttaacgcg caatactgat
    25501 atcaatttcg ataaacaaca gcggcaaacc agctggttga ttgtcgccct ggcaacgtta
    25561 ctcgcggcac ttgccacttt tctgctggcg cgcggtttac tggcaccggt aaaacgactt
    25621 gtcgatggca cgcacaaact ggcggcgggc gatttcacta cccgcgtaac gcccaccagt
    25681 gaagatgaac tgggcaaact ggcgcaagac ttcaaccagc ttgccagcac actggagaaa
    25741 aaccagcaaa tgcggcgcga ttttatggcc gatatttctc acgaactgcg tacgccatta
    25801 gcggtgctgc gcggtgaact ggaagccatt caggatggcg tgcgtaaatt cacgccggag
    25861 acggtggcgt ctttacaggc ggaggtcggt acactgacca aactggttga cgatctccat
    25921 cagttgtcga tgtctgatga aggcgctctc gcctatcaaa aagcaccggt agatttgatc
    25981 ccactgctgg aagtggcggg cggcgcattt cgcgaacgat tcgccagtcg tggcctgaaa
    26041 ctgcaatttt ccctgccaga cagtattacc gtatttggcg atcgcgaccg tttaatgcag
    26101 ttattcaata acttactgga aaacagcctg cgctacactg acagcggcgg cagcctgcaa
    26161 atctctgccg ggcagcgcga caaaacggtg cgcctgacct ttgccgacag tgcgccaggt
    26221 gtcagtgacg atcagctaca aaaattgttt gaacgttttt atcgcaccga aggttcccgc
    26281 aaccgtgcca gcggcggttc cgggctgggg ctggcgattt gcctgaacat tgttgaagca
    26341 cataatggtc gcattattgc tgcccattcg ccttttggcg gggtaagcat tacagtagag
    26401 ttaccgctgg aacgggattt acagagagaa gtatgaccga gttaccaatc gacgaaaaca
    26461 caccgcgtat tttgatcgtg gaagatgaac cgaagctggg gcagttgctc attgattatc
    26521 tgcgtgctgc gagctatgcg ccgacgctta tcagccacgg cgatcaggta ctgccgtatg
    26581 tgcgccagac accaccggat ctgatcctgt tagatctgat gctccctggc accgatggcc
    26641 tgacgctgtg ccgggaaatt cgtcgttttt ctgacattcc gatcgtgatg gtgacggcaa
    26701 aaatcgaaga gatcgatcgc ctgctggggc tggagattgg cgcagatgac tacatctgca
    26761 agccgtacag cccacgggaa gtggtagcgc gcgtcaaaac cattttgcgc cgttgcaaac
    26821 cgcagcgcga gttgcagcaa caggatgctg aaagcccgtt gattatcgac gaaggtcgtt
    26881 ttcaggcttc atggcgcggt aaaatgcttg acctgacgcc tgcggaattt cgtctgctga
    26941 aaacgctctc tcatgaacca ggaaaagtgt tctcccgcga gcatttgctc aatcatcttt
    27001 atgacgacta ccgcgtagta accgaccgca ccatcgacag ccacattaaa aacctgcgcc
    27061 gcaagctgga atctctcgac gccgaacagt catttatccg cgccgtttac ggcgtcggtt
    27121 accgctggga agccgacgcc tgccgcatcg tttagtttta gcgacattat tttgttagcc
    27181 ggagatggcg ttcagacccg atccggccac attatcccac gcatggtcag caaactgaca
    27241 ttatctctcc gccctggcag gcatcagaaa atcgctcata ctttaatcgg taaacagcac
    27301 ctttagatgc tgttttcgat acacaatttc aatcaaggag tcattatggc tggttggttt
    27361 gaactcagta agagcagtga taatcagttc cggtttgtgc taaaagcggg caatggtgag
    27421 actatcctca ccagcgagct gtatacctca aaagcctctg cggaaaaggg catcgcgtcg
    27481 gtgcgtagca acagcccgca agaagaacgc tatgagaaaa aaacggcaag taacggcaaa
    27541 ttctatttca atctgaaagc cgctaatcat caaattatcg gctccagcca gatgtacgcc
    27601 accgcgcaat ctcgtgaaac cggaattgcc tccgttaaag ccaatggcac aagccagacg
    27661 gtgaaagaca atacgtaatt acgatgccgg gcgtgggtta ttggcgtccg gctttatatc
    27721 caaataacgc ttagttatta ataattaaga gtaaccgccg ccattaaaat agtgggcact
    27781 gacgagcact cgttgtgctt tctttgttta ccatcccata cttatcctcc tgaacatgtt
    27841 catgtgccaa aatatcttct aatactttcg tgacgctatc cggtttatga catacactga
    27901 tgtaagattt ttacttacag gcgggcgtaa aatggccaga acgatgacgg ttgatctcgg
    27961 cgatgagttg cgtgaattta tcgagtcctt aattgaatcc ggcgactatc gcacccaaag
    28021 cgaagtgatc cgtgagtcac tgcgattact tcgagaaaag caagcagagt ctcgcctgca
    28081 agcgttacgt gacatgctcg cagaagggtt gagtagtggt gaagctcagc cgtgggaaaa
    28141 ggacgcgttc ttacggaagg tgaaagcagg gataaggaaa taatgtgcgt attattaaac
    28201 tcatgccaaa agccaatgag gatttagaag gcatctggta ttacagctat caccatttcg
    28261 gcgaaccaca agccgacaga tatgtggaac atctttcaga cgttctccag attctgagta
    28321 acaataatat aggtacgccc agacctgaat taggcgaagg tatttttgtt cttccttttg
    28381 aacgccacgt catttatttc ctgcaatcac caggggaaat tatcgtcatt cgtatcctta
    28441 accaaaacca ggacgccacc agacatttac actggagcta aacccgccga ttgcgctaca
    28501 atgcccgcca cttaaagtgg gggcactccc ctaaccgctt catcaggtga agcggatctg
    28561 acctgtcatc agaacgagag aattatgttt aaaccggaac tcctttcccc ggcgggaacg
    28621 ctgaaaaata tgcgttacgc tttcgcttat ggcgcagatg ctgtttatgc gggccagccg
    28681 cgttattccc tgcgtgtgcg caacaacgaa ttcaaccacg aaaatcttca gctcggcatc
    28741 aatgaagccc acgcgctggg gaaaaagttt tatgtcgtgg tcaacattgc accgcacaac
    28801 gccaagctga aaacctttat ccgtgacctg aaaccggtgg tggaaatggg gccggatgcg
    28861 ctgattatgt ccgatccagg gctgattatg ctggtgcgtg agcacttccc tgaaatgccg
    28921 atccaccttt cggtgcaggc taacgccgtg aactgggcga cggtgaaatt ctggcagcaa
    28981 atgggcctga cccgcgtgat cctctctcgc gagctgtcgc tggaagagat tgaagagatc
    29041 cgcaatcagg tgccggatat ggagatcgag atcttcgttc acggcgcgct gtgcatggcc
    29101 tactccggtc gctgcctgct ctctggctat atcaacaagc gcgacccgaa ccagggcacc
    29161 tgcaccaacg cctgccgctg ggagtacaac gtccaggaag ggaaagaaga tgatgttggc
    29221 aacatcgtac acaagtacga gccgattccg gtgcaaaatg ttgagccgac gctgggtatc
    29281 ggcgcaccaa ccgacaaagt gtttatgatc gaagaggccc agcgtccggg cgagtatatg
    29341 accgcgtttg aagatgagca cggcacttac atcatgaact cgaaagatct gcgcgccatc
    29401 gcccatgtag aacgcctgac caaaatgggc gtgcattcgc tgaaaatcga aggtcgtacc
    29461 aaatctttct actattgtgc acgcaccgca caggtttacc gcaaagctat cgatgacgcc
    29521 gctgcgggaa aaccgttcga taccagcctg ctggaaactc tggaaggtct ggcgcatcgt
    29581 ggctataccg aaggtttcct gcgtcgtcat actcacgacg attatcagaa ctacgaatac
    29641 ggttattcag tttctgaccg ccagcagttt gttggtgagt ttaccggtga gcgcaagggg
    29701 gacctcgcgg cggtagcggt gaaaaataaa ttctccgttg gcgacagcct tgagctgatg
    29761 acgccgcaag gcaacattaa ttttaccctt gagaacatgg aaaacgccaa aggcgaagct
    29821 atgccgatag caccaggcga tggttatact gtgtggctcc cggtcccgca ggatcttgag
    29881 ctcaattacg cgctgctgat gcgtaatttc tccggggaaa ccacgcgtaa tccccacggt
    29941 aagtgattaa tttcgattat ttttcccgga tggaaaattc ttagaaaccg atcacataca
    30001 gctgcattta ttaaggttat catccgtttc gctgaaaaac ataacccata aaatgctagc
    30061 tgtaccagga accacctcct tagcctgtgt aatctccctt acacgggctt attttttacg
    30121 tacaacaaat tgaaataaaa ggatttattt ctggtcacgt ccacacattg accacatcga
    30181 caaaaaaagc ccctcgactg aggggcttcc tgtttctaat tacatccaca taatttgctg
    30241 ccctgacggc aacgggtgcg gccttactgc gtggacttct cccggcttca cgatgtatct
    30301 ctgtaccgac tcataagtga tgaacgtggc gctgcaattc acgttctgac actggtgata
    30361 acgctctttt gtcgtgtcag tgatatagcg acttgtacgc gcatgtgcgg catgctggca
    30421 taaaggacaa tgaaacatcg cgagcacctc ttccggtttt gttgatggtg ccattttagt
    30481 taatttaccc ttataaaaca aacagataaa acaaaatatc actcatcatc ttctgtttcg
    30541 tactccacat cagaaagcct gacctcaagc tctaaggacg tcgtgaagcc gctattattc
    30601 agaaaatgtg tcaccttagt gattgtccag tcctgctcgt ctatgacgcg cttaaagcct
    30661 gatactttga ccggcgtttc cgtgtaaata tctgcccgac cagtagccag actgatggaa
    30721 aactccgcaa cgccccgttg cagcttatcc cacttcgcct gagcggcgcg catggcctgc
    30781 gctttcgtgg catataccgt ggtcagggca aaaacgttgt cagcctcacc tgccatgtat
    30841 tcaccttcgc gcgcttccgg tacttttggc gttttcttct gcgtgaccgg tttcgctttc
    30901 gggtgctcca gtgcgcgcag gtgtttctct ttctttttgc gtttcagttt taccttctgc
    30961 ttttgtggct tcgggtcttt ggtgtgtaac cactttgctg ttacgccggt ataggctcca
    31021 cggtcagcaa tcgcaaaatg atggcggtcg ccgtcgctgc gggttatggt gacctgcggg
    31081 atttttttac cactggccgt caccccctgc cccgctttga gaaacaacag ttttcccatt
    31141 tttaccgaga cctcaccgcc gttgcgttct gcaagacggg tcaggaattt cgcatcagac
    31201 tcctgcgact ggtcgatgtg cgggatttta attccggcca gtgacggagc gacactggct
    31261 tccagcctgt tacgggaggc tatcgcctca acaatcgcac cgagcgtggt gtcatgccag
    31321 gagccttcac ggcgggaatt gagcgtcccg cggaaatctg cactccgggc gcggatggtg
    31381 accacatccg gcgcgccccg gtgttcaacc tcatcaacgg tgaatttccc tttgcatacc
    31441 agggcaaaac ctttccagcc gatatacacc gtcaggacag cgccacgaac cggcagcccg
    31501 acctgcccgt cggcatcgtt cagttcaata tcaagctggt cagcctcaaa gccccggtta
    31561 tccgtcaggg tcatgctcat cagacggtcg ctgatattgc cggtaatatc cctgctgtcg
    31621 agcatcagca tgtaatccgg cgtcagcgta ctacctgcat caaatgtcag cgcgtccagc
    31681 attatcccgc ccccgtcata cccgtgaatt tagtcgccat actgccagcc ttaccgatga
    31741 gcgattccgc ctgtttaccg atatcgccat aaagcgcggc cagtgattca tccacgcggg
    31801 tgagcgacaa cgtaaaatca attttccggg gtgtgccgtc tgcaaagaaa atactccctg
    31861 tttcactcac cctgctgatg acatacatgc cgtaaatcat gccggtgcca tccagcaacg
    31921 gccacgcccg gccttcctct gccatcagcc tgagcgtggt catcgtcagc ttcccgccgg
    31981 tcagttcggg ataaagcacg ccggcaagcg tcatgttttc ctcacccaca ccgagaaact
    32041 gaaaggcatc ccgtttaccg atacggggat ttgacggcca gcgataatct gattcgcgct
    32101 gcatggtctg gtgtggcagc gtctggcgca taaaaacaaa catacctaac gcgagcatca
    32161 tttttcgtca cctccttaac cgtcatgcat catgctggca cgggcgcgcg cacgtttatc
    32221 ccgctcgtat ttttcgagcg catcctgtaa ctggcggtca ggctgtgtcc ccggcgcagt
    32281 accacccgtc aggctgatgt gatattcgtt tttactctgg tccacataag agcggccagc
    32341 cggtgccgta accggctgat aagcctgata gcctgcataa gagctggtcg ccggaatata
    32401 accaccggtg ccatacgtgg cggcattagt ccttgcggcg gtctggtcaa gtgtgtctga
    32461 ctctttgtta ataacaccga gtttttccag tacccagtca ataccactgc gcagtttgtt
    32521 gaacgcatta agcggcagca tcaacgcgtc agccagtgcc tgcccgaaca tgacgcccgt
    32581 gtcacggcaa cggttcaggg tgtcctgtgt ggctttaacc ggggcaatca ggtttttaaa
    32641 ccactgccac gcggcctgta acttttcgcc cagccagtca aacaccggct taagtggcgt
    32701 gaacagttcc cccaccggcg caaatgccgc tttcagccct tccaccacac cgccaaagaa
    32761 tgcgctgaca ggctcccagt atttacggat aagcaacgcc ccggcgacaa tggcggccac
    32821 cacggccaca accggccagc taatcgctcc aatggcggtc ataacagcac tgccaaccgt
    32881 cgtgaagatt gcccccattg cgcctgctgc cgcgatgatg gcattgatgc cggtgataac
    32941 cggccaggct acgaggccaa tggcaccgat gacaccaatc attgccagtg caccaccgac
    33001 aatgatgccg atggttgacg ccagtgattt gtttttctgg atccagccgt cgagttttaa
    33061 cacatacttt gtggccgtct gcgtgagctt acgcagtgcg ccttcctgct ggtcaaacag
    33121 gtcagtcccc accgcctcat aagcggactg aaactcctta aagtcaccgc cgaggttgtc
    33181 ctgcatgata tttaccagct ctgcggtctt tccgtctgag gctttaaacg cagcggtcag
    33241 tttgtccagc tttccggttg aggcggcagt catcagcacg gcggcggctg aactggcctc
    33301 ctccccgaaa atggttttca tgtattcagc ctgctgggca gtaccgagcc ggtttttctc
    33361 aaaactggcc tgcatttctt tcagaatggt aaatactggt cgggtgtttc ccttactgtc
    33421 tgaggttttc acaccaagct ctttgagtgc atcccatgct tttcccgtcg gtgcctgcag
    33481 gcggcttaac acggcacggc ttcccgttcc cgccattgag cctgtgattt ttgcatcatg
    33541 cagcgccccg accattgcgg cggtttcttc aatgctgaca ccggcatttt ttgccacagg
    33601 tgcggcatag gtcagcgcat cgctcatgcc gtcaaaatcg gcggcggttt tgttcatcgt
    33661 catggagaga acatccccga tatgagcgac cttatcgttt gaaagctgaa aggcggattt
    33721 catccccatc agcagggcgg cgttttcttc catcgtgcga cggttcgcca gcgccatatt
    33781 cagcgtgacc ggcgttgccg cctgaatggc atcaacatcc ccaccggctt tcgcaataat
    33841 aatctgcgca ccagctgcat catctgccga ggctgcggta ttgtcgccga gctgacgcgc
    33901 ctgcttgcgt agtgcagcca tttcggcgga gtcttttacc actccgagca cggcctgcaa
    33961 ttctgagttt ttctgcgcaa actcataacc gggcatcagc agcttaactc cggccatcgt
    34021 tcccgccgcc gcaatcccca caccggcagc gcccaccgag gccatatttc cggccagttc
    34081 ctttccggcc tgataacgct gttttactgc gttaagtttt gcctgttgtg cactgacacg
    34141 cgccagcgcg tcgcgctgac ggttaagctg tgcggtggtt tcactgatac ggtttttcag
    34201 tccctgctca tcatgtgcaa gattgcgggt attaattccc acagcggcca gttcccgctg
    34261 ctggcgttta acggaatctg tcaggcggtt atatttcgcc tgtaagtcct ccgccgcacg
    34321 ctttgcggat tccagcactt tcgcctgagc acgggtcgga cgttcggtgt ttttaaactg
    34381 tgtggcaagg gcttcggcct cctgccgtgc cttttcaagt gcatgaccag tcacggcgag
    34441 ctgtgcactg gtcttgcgga atccctcaat acgggatgcc tgaccgttca gctcgcgcag
    34501 tgatttttgt gtttcccgga tatcccccga cagcgatttg ctcgctgtgc ggatggattt
    34561 aaacgggcgg gatgcctggt caacagccct gagcaatacc tgtaatttta cattgttact
    34621 cattcgtgtt tccgcttcgc cggagcgcct tttcgcgcca tgtgatgagt tcggtcaggc
    34681 tcatgggata cagttctgat ggcggccagt gaaatatcac tgccacatcc gccatcaggt
    34741 catcgaccga gagatttttc ggaaacgtca ctgcaccgag ttcggcgaca aaaaaccgac
    34801 caccttaccg gccagcgcca caaggtcagg cagttccagc gcggcgactt cctgctcggt
    34861 cagcatcggt gccgtcatgc gcggcagcac cttaatcagt gcatcgactt cagagttcgc
    34921 gaccgcagcc agactgacac cgcgcagcgt cccggcactg ggtttcatca gcgtgacctg
    34981 ttcgatgacc tgctcaccac gcttgaccgg attgtccagg gtaatcacat tttctttgtt
    35041 catggttttc tcacttctga atcgggggtt aaccggtcag cctggctgac cggatgaaaa
    35101 tcacaggccg atattgcggc ggtgttgctc cagccggtcg acgccgttca ccttctcaat
    35161 catgttgatg gtgtcgattt cgaccagctc cttaccgtcc atcgtcagcc ggaaataggt
    35221 gcagaccacg gagattttcg actcggtgtc ttctccctgt ttaccctcgc cggtgtcgat
    35281 ttctttctga cgtccacgca tgaccacctc gacggccacc gtttcgccgg tatcgtcgcg
    35341 ctggtaagag cctgcaaaac gaatcggcac ggcatccaca ccggttgcgg cgtaaagctc
    35401 ccagataacc gaatccggga agcccccgag cgaccactcc attgacagcg catcgtcatc
    35461 aaggccgagg tctaccggtg cgctgccgtt catccccgca cctcgatagt tttcgagctt
    35521 acgggtcagt tttggcagcg tgacggactt tgcaacgccc tgatagctgt agccgttcag
    35581 aaagacgttc attaacttga gtttgcgcgg cattgccatc ggtcaggctc cttaattgct
    35641 gttaaccgag gtgaccagat ttgccaggta tttatcggtg atacgctggc gcagggtcag
    35701 gttttcaaga ggaggcaccg gggtatagtc gtagtcgata tacagttttc cggccttgag
    35761 ggtttccgca tcgttggatt cttcgctaaa ccagcaggtc gcatccacga tatagccgtt
    35821 tgttttcagc tcacggaatt tggcattgat gccgtcaacg atgtcacgaa tcagcgttgc
    35881 ggtgatgggc ttgtccaccg cccacatgtg cgcctcagcc atcgtgtcgg ccagtacctg
    35941 tgcggtgcgg gtgtagtttt caaagaggaa cagcgggtca tcagagcagg tacggttacc
    36001 ccagaagcgg aaaccgtcac ggcgaatcag tgttgtgacg cctgactcgt taagcaggtc
    36061 agcatcggtg ccggactcct gcaaatccca gaatacagat gcgctgatgc cggtaacacc
    36121 gttcaccccg acgttggaca gcgttttatg ccagccctgc tcctggtcga ttttggcacg
    36181 cagacccagc gcacgggcgg tagcatacgc ggtggcggtg gtactggtga ccgtatccca
    36241 tgcgaggaaa tccggccaga tgaccatcag ctcacgctgg ctgaaattct ggcggtaagc
    36301 tttcacctcg gaaatggttt tacagcccca tgcgctgata tacccgaaag cgcgcaactt
    36361 ctgacagact gatgccagtg caacagccac ctctttggta tccagtcccg gtacgccgag
    36421 aatacgcggt ttaacaccgg ttaccgactc cgccgccagc agggctttca gtccggtgta
    36481 ctgaccgttt tcgtcggtgg tgccgatgat attggaaacg gtctgcgcga gtttcgtttc
    36541 ttcgtcgtcg ccggtgccgt cttccacgcg cacaacaacg gtgaccggtt ttgactggtc
    36601 agcgatggcc tgcaacgatg ccgccagcgt gcctttttta ccggcctttg caattgcgct
    36661 ctgcacattg gtaatcagca ccggtttatt gagggggaag gtttccgcat ccgcatcgct
    36721 ggccgtgcag accatgccga caatggcggt ggatacggtt gaaatgacgc gggtgccgtc
    36781 gttaatctcc agcacctgca cgccgtgatg atagtcactc atccgtttaa ctccgtggtt
    36841 aatgggtgca actattttct gttgtacaga gcatgagacg ctatttgatc tgtctggtca
    36901 gtggatgaaa caacagatac agaaaaggcg ggcaattcgc ccgcctgtcc tagtttgtac
    36961 tcactcattt tccgactgac aatttacata gccaaaacgc tatcaaatct gacagtctgc
    37021 tttgagcgaa aagcagactg tcacgcgttg aagttaattg tattacttag ataaacacta
    37081 tcattttcct gacgttaagt tgtatctttg ataggattaa aaaacgtata gatagcttat
    37141 gctactgagg gaataaaaat gacgaaaatt agtgaacgat ggaagcacaa tggcattact
    37201 gaaggttatt gcaatatttg tgggaaatat ggcttgctca caaaagatca tgttcctcca
    37261 aagtgcgcca taaccttagg ccctgttttg cagaaaacag ttagcgaatt ttttggtatt
    37321 caggaaccag ttaaaccatt aaatgctaaa aatggctctt atttcagaac catttgcagc
    37381 cactgtaaca ataaggtatt aggtgggctc gatgttgcaa ttgaaaatgt aacaaagtcc
    37441 tttaaagaac agttaagtcg atatatgaat ggtatgaatg tatatccatt cattagaata
    37501 ccttttgata gcatatcttt cactaaggct atgattgggc acgtgctatc agcaacttca
    37561 gttgaagatt gtaaaaaaga acccgtagat agccccttct atacaccttt aaaggattat
    37621 gttttgggta aaaattcaag ttttgaggaa actcatgata tttactactg gttttaccca
    37681 cacagaatgc acatatccgc tcaaagtgta gcatttatga acgaaggaca tgtggcattt
    37741 atttgtgctt tacatttttt tcctatcggt tttattatca caatgaaaaa tgaaggaaca
    37801 taccctgccc actctacaaa attagaactt gaagataaat tccttacatt taatatgacc
    37861 tctataaatt atgagtatac gacatttcca tttgtaaatc ttaagggaaa ccaaatgtat
    37921 gcgataagca acggtcatac ttgtgtgagt tatccaataa ttaagtgacg gctaaatcat
    37981 acaatctacg catgttcact ttctacatat accatctata atgtccgctg ttggcacaaa
    38041 gcagacgccc actctcacgc gaatgctttg cccttgactt gccaacaacc gtatcgcttg
    38101 ctccgcaact atggtttttt attagaatct tcgccactaa ataaattata ataaattgat
    38161 tttattagat atctgtcaga atctatatgg tcagcacgag tagcatgctc taatgtttca
    38221 aatgctaggg tttgtgcggc ttcagcaaaa attccaggcc aacccttact cagcatcgac
    38281 agtcctttaa ggacccttat ctgaatttcc ctcatactgg caccatcgcg cgcaacaggt
    38341 gagaaaaagt cttcaagtag atcgttattc tgaagtggtg caacatgtac agaaggatat
    38401 ttcacttcta tttcatcaga tttattctgc gcgtaagcgg aaagtatacg tacacctctg
    38461 ccaatgacat caatggcggt tccaggatcg ttcactgcgg gggaaagggc tcggcaggct
    38521 atttcggcca tgacgctaag acaaaatcgg gggtcctgag caaatgaacg tacatccgag
    38581 acaataatcg tctcaagtaa atcggtgctg attgatgact cctggccctg actcaggtac
    38641 aaaactggcg tggacggatg tatgaaactg cccggctgcg ccacgaggta tacatgacgg
    38701 ggatcattgg tcagcagctt gctgagtttc accatatcaa catattcaac atagccaatc
    38761 tttttcggat aaactgcaac cgttcctttc ggctgttcat tgttctcaag ccatggatat
    38821 ccgccgagac agggatttct tgctctcgca ataaatgttt cgatggccgc ctgttctact
    38881 tttgccgttg tctcaccaac cctccccaga gaggtcaaat gctgtatcca gcgaagcaat
    38941 gtgatgagga ttaaggcaat gacaaccagt gttacaatga ataaaatgac tctccccctt
    39001 tctccataag ctcccatatt gagggcaata atccctacca gactgaagag aaaagaaccg
    39061 atgaaggtgg ccagtacatt ttgtgtggtg acgtcttcaa caactaaacg agtagctctg
    39121 ggagtcacat tagtagtggc tgaaccgtag gctgtgacca tgatgctcag cgaaaatgtg
    39181 gtcactgcca gcatactcga tgccagtatg ttcagaatgt tatcgactgc ttccgcacca
    39241 accttcacgg aaaccgactc aggtatcatt gatttaaaaa gaattgataa aagggccgtt
    39301 attattgcga caattgcgaa taacgttgcc ctgaaccata gttttttaaa tgtctgcttc
    39361 agcatccatt tccagcgtga aatcattctg cattccctca tattgcagcc gggataaata
    39421 aatgccgcct ctgtggcggc atgttgctgt taacgaacca gatgcaggaa gtgcaggtgt
    39481 ttttcgtact ggtccagtat gtcattaatc agctgttcct gattccagcc cattacatca
    39541 taattttggc cgccctcttt gagatagact tcagcgcgat aatatcgatg ttgttcactc
    39601 tgctgctcat cattatccag cgcagcgagc gcgaaggtcg gtgagttata cccgcgaagc
    39661 ctcacttcat atatataatt cagctcgttg cccaaatcga cttcaaggcg aatacgatcc
    39721 tcggcggcgt cactgatgtg gcttatcgtt ccctgcttgt taagttcctc ctgaaccagc
    39781 gtcatggcgg gttggataat gtcgtccata aaacgtttca caagagagcg cttcggcaaa
    39841 tacgcgatat tgcgtaacct tctctgccag ggaattgggt tacgtgcagc cgtaggagca
    39901 atagtcgcca tgctaaggct ttcacgcttg gtcaaatccc gacgcagggc ttttaacagt
    39961 ccgtatatgg atattaataa gataactgag aagggcaatg cactcgctat cgttacggtt
    40021 tgcaacgcac tcagcccccc tgcgatcagc agggcaatag caacaacgcc catgagcaat
    40081 gcccagaaaa ttcgctgcca gacgggcgtg tttgccaccc cacctgatgc cagagtatcc
    40141 acaaccattg cccccgaatc agcagacgtt acaaagaaga cgatgaccat cgccattgca
    40201 atgaatgaca gcacggaaga gaacgggaaa tgctccagga aattaaacag ggcaagcgca
    40261 acatcctgct gaacggtatt ggcgaggtca gtggcgccct ggttcatgat gagatagatg
    40321 gcgctgtttc caaacaccgt catccacatg agcgtaaagc cggcgggaac aaacaacacg
    40381 ccagtcacga actcacgaat tgtcctgccg cgggaaacgc gtgcaatgaa catacctaca
    40441 aacggcgacc atgaaagcca ccatccccag tataataatg tccagccccc cagccagttg
    40501 ctcgacttgg gttcatacgc gtaaaggttg aacgttttac tcaccagttc cgacagataa
    40561 ccacccgtat tttccacaaa tgacttcagc agaagcacag tgggacccag gcacaagacc
    40621 agcgccagga gcaacaccgc caggcccaga ttaagctcag acaggatgcg tattcccttg
    40681 tccaggccgg acaccaccga aatcgtcgct aaccccgtga tgaccacgat caaaatgacc
    40741 tgtaccgttt cattgatggg cacgccgaaa agatggttca aaccggcatt cacctgcaat
    40801 acaccgtaac ccagcgatgt tgcaacgcca aagacagtgc ctatcacggc gaagatatca
    40861 accgcgtggc ctataggccc gtaaatgcga tcgccgataa tgggatagag cgcagaacgc
    40921 agcgttaaag gcagaccgtg acggtaactg aaaaaggcca gaatcagcgc cacgatggca
    40981 taaattgccc atgcgtgcag accccagtgg aagaacgtca ggcgcatggc ttccttcgct
    41041 gccgcaacgg tctctggagt gccgacaggt ggcgaaagat aatgcatcac aggttcggca
    41101 acgccaaaga acatcaggcc gatccccatc cctgccgaaa aaagcatcgc gaaccaggag
    41161 tggtagctga aatcaggctg cgcatggtct gggcccagct ttatatcacc gtaacgtgag
    41221 agtccaagga acgtgacgct cagtaaaatc agggccacag caagtatgta gaaccagctg
    41281 gcattcgtga agatttgttg ctgaagtagt ttaaaatttt tgtcggcgac atccgggaat
    41341 acggcggcaa aggcgacaag aaggaaaatt agcaaagcag atgtaaagaa taccgctttg
    41401 ttaacctggc ttgtagactt ctttggggtt gtatcatttt cactcataat catttattcc
    41461 attaattaaa tccgcactgg atagaaggta ctacctctca cagagtagca aagttcaact
    41521 ggctatgcgg gattaatcgg aatgcatggt ggaatgagt
//
LOCUS       DADMHC010000007        41257 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.007, whole genome shotgun sequence.
ACCESSION   DADMHC010000007 DADMHC010000000
VERSION     DADMHC010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 41257)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41257)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41257
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.007"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            1..173
                     /locus_tag="JNZ57_000302"
                     /pseudo
     CDS             1..173
                     /locus_tag="JNZ57_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(230..649)
                     /locus_tag="JNZ57_000303"
     CDS             complement(230..649)
                     /locus_tag="JNZ57_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8826647.1"
                     /translation="MHQLRHPLLGCVFCNECDPHPFAPDPLQIFHHYYEWGRPCFPIR
                     AGNRFSRSLRWSGPGSCCLHTGCRAVSKQVSSALIRGRLYGPILTSSKISMFHRTVYF
                     RSASRTPRDSRSLPFPESLTTSFLRMKQHRVVWSVLL"
     gene            699..1877
                     /gene="ltrA"
                     /locus_tag="JNZ57_000304"
     CDS             699..1877
                     /gene="ltrA"
                     /locus_tag="JNZ57_000304"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005017045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HAY8826648.1"
                     /translation="MCVATREPPGCDGQTLKMFDQQRDGNLYKIWNRLCSGTWFPPPV
                     LEKRIPKSNGKERILGIPTVSDRIAQGAIKLFMEEKLDSIFHADSYGYRPGKSAHDAL
                     KQCAIRCWRYSWILEVDISAFFDHVKHDLVLKALEHHGMPKWVILYCRRWMEAPMQSC
                     ENGELITRTRGTPQGGVISPLLANLFLHYAFDLWMEREYRGVPFERYADDIVVHCSRM
                     SDATRLKNRLSERFSEVGLVLNAGKTNIAYIDTFKRRNVATSFTFLGYDFKVRTLKNF
                     KGERYRKCMPGASNAAMRKITETIKKWRIHRSTAESLLDFARRYNAIVRGWIEYYGKF
                     WSRNFNYRLWSAMQSRLLKWMQSKYRLSNRKAQRKLTLVRKEYPKLFVHWYLLRASNE
                     "
     gene            1960..2139
                     /locus_tag="JNZ57_000305"
                     /pseudo
     CDS             1960..2139
                     /locus_tag="JNZ57_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(2169..2651)
                     /locus_tag="JNZ57_000306"
                     /pseudo
     CDS             complement(2169..2651)
                     /locus_tag="JNZ57_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016154415.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            complement(2907..3887)
                     /locus_tag="JNZ57_000307"
     CDS             complement(2907..3887)
                     /locus_tag="JNZ57_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HAY8826649.1"
                     /translation="MENRKHRPTIGRTLNTNILNNTEEISAPVHVFTLNTGRKAKFTE
                     IKVDHDKVDTQTFVVEEVNGREQTALTPDSLKDITRTIRLQQFYPCIGIRTGDLIEIL
                     DGSRRRAAALLCKVGLRVLVTDDELTVSEAQHLAKDLQTSLEHNIREIGLRLVRLKEA
                     GMNQKQIAEREGLSAAKVTRALQAASVPKDFVSLFPVQSELTYADYRQLAELSERLRL
                     GDISIDEVVKNISPSIELITADDNLSEDEVKNSIMRLITKEMSSLLDSGVKDKAVVTL
                     LWKFDSKDKFARKRVKGRTFSYEFGRLPLEVQDKLDRMIALVLKDNLNSL"
     gene            complement(3887..5086)
                     /locus_tag="JNZ57_000308"
     CDS             complement(3887..5086)
                     /locus_tag="JNZ57_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HAY8826650.1"
                     /translation="MTSFEQLSKVAQRADKMLLALTKQIQEQKQEFQADVFYQVYSKS
                     AVAKLPKLTRASVDGAVGEMEAQGYQFEKRPAGTATKYALTIQNIIDIYAHRGIPKYR
                     DRYSEAYSIFIGSLKGGVSKTVSSVSVAHALRAHPHLLSEDLRILLLDLDPQSSATMF
                     LNYLHAVGLVDTTAPQAMLQNVSREELLEDFIVPSVIPGVYVMPASIDDAFIASNWDT
                     LCEEHLLGQNKHAILRENIIDKLKHDFDFILIDTGPHLDAFLKNAIAAADIMFTPVPP
                     AQVDFHSTLKYLARLPELVQIIEQDGCSCRLQANIGFMSKLANKSDHKYCHSLTKEIF
                     GGDMLDVSMPRLDGFERSGESFDTVISANPVTYVGSGEALKNARMAAEDFAKAVFDRI
                     EFIRANY"
     gene            complement(5408..5745)
                     /locus_tag="JNZ57_000309"
                     /pseudo
     CDS             complement(5408..5745)
                     /locus_tag="JNZ57_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(5812..7614)
                     /locus_tag="JNZ57_000310"
     CDS             complement(5812..7614)
                     /locus_tag="JNZ57_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001339475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HAY8826651.1"
                     /translation="MVTFETVMEIKILHKQGMSSRAIARELGLSRNTVKRYLQAKSEP
                     PKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAFIR
                     SLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVPGYSRMLYIEFTDNMR
                     YDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFS
                     PRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGSTVDVETANRHGLRWLHDVA
                     NQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHPGENLVSFDNPPPASSTLHLRL
                     ILQRSGVMMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEEK
                     LARHQRKQAMYTRMAAFPAVKMFEEYDFTFATGAPQKQLQSLRSLSLIERNENIVLLG
                     PSGVGKTHLAIAMGYEAVRAGIQVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAPRL
                     LIIDEIGYLPFSQKEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAML
                     GRILHHSHVVQIKGESYRLRQKRKAGVIAEANPE"
     gene            8967..9746
                     /gene="ipaJ"
                     /locus_tag="JNZ57_000311"
     CDS             8967..9746
                     /gene="ipaJ"
                     /locus_tag="JNZ57_000311"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858255.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector cysteine
                     protease IpaJ"
                     /protein_id="HAY8826652.1"
                     /translation="MSEQRKPCKRGCIHTGVMLYGVLLQGAIPREYMISHQTDVRVNE
                     NRVNEQGCFLARKQMYDNSCGAASLLCAAKELGVDKIPQYKGSMSEMTRKSSLDLDNR
                     CERDLYLITSGNYNPRIHKDNIADAGYSMPDKIVMATRLLGLNAYVVEESNIFSQVIS
                     FIYPDARDLLIGMGCNIVHQRDVLSSNQRVLEAVAVSFIGVPVGLHWVLCRPDGSYMD
                     PAVGENYSCFSTMELGARRSNSNFIGYTKIGISIVITNEAL"
     gene            complement(10692..11621)
                     /locus_tag="JNZ57_000312"
     CDS             complement(10692..11621)
                     /locus_tag="JNZ57_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Virulence regulon transcriptional activator
                     VirB"
                     /protein_id="HAY8826653.1"
                     /translation="MVDLCNDLLSIKEGQKKEFTLHSGNKVSFIKAKIPHKRIQDLTF
                     VNQKTNVRDQESLTEESLADIIKTIKLQQFFPVIGREIDGRIEILDGTRRRASAIYAG
                     ADLEVLYSKEYISTLDARKLANDIQTAKEHSIRELGIGLNFLKVSGMSYKDIAKKENL
                     SRAKVTRAFQAASVPQEIISLFPIASELNFNDYKILFNYYKGLEKANESLSSTLPILK
                     EEIKDLDTNLPPDIYKKEILNIIKKSKNRKQNPSLKVDSLFISKDKRTYIKRKENKTN
                     RTLIFTLSKINKTVQREIDEAIRDIISRHLSSS"
     gene            complement(11838..12074)
                     /locus_tag="JNZ57_000313"
     CDS             complement(11838..12074)
                     /locus_tag="JNZ57_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HAY8826654.1"
                     /translation="MIKEKILSIVAFCYGIAYSKLSEETKFIEDLSADSLSLIEMLDM
                     ISFEFNLRIDESALEHIITIGDLISVVKNSTKSI"
     gene            complement(12078..13979)
                     /gene="ipaA"
                     /locus_tag="JNZ57_000314"
     CDS             complement(12078..13979)
                     /gene="ipaA"
                     /locus_tag="JNZ57_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector invasin IpaA"
                     /protein_id="HAY8826655.1"
                     /translation="MHNVNNTQAPTFLYKATSPSSTEYSELKSKISDIHSSQTSLKTP
                     ASVSEKENFATSFNQKCLDFLFSSSGKEDVLRSIYSNSMNAYAKSEILEFSNVLYSLV
                     HQNGLNFENEKGLQKIVAQYSELIIKDKLSQDSAFGPWSAKNKKLHQLRQNIEHRLAL
                     LAQQHTSGEALSLGQKLLNTEVSSFIKNNILAELKLSNETVSSLKLDDLVDAQAKLAF
                     DSLRNQRKNTIDSKGFGIGKLSRDLNTVAVFPELLRKVLNDILEDIKDSHPIQDGLPT
                     PPEDMPDGGPTPGANEKTSQPVIHYHINNDNRTYDNRVFDNRVYDNSYHENPENDAQS
                     PTSQTNDLLSRNGNSLLNPQRALVQKVTSVLPHSISDTVQTFANNSALEKVFNHTPDN
                     SDGIGSDLLTTSSQERSTNNSLSRGHRPLNIQNSSTTPPLHPEGVTSSNDNSSDTTKS
                     SASLSHRVASQINKFNSNTDSKVLQTDFLSRNGDTYLTRETIFEASKKVTNSLSNLIS
                     LIGTKSGTQERELQEKSKDITKSTTEHRINNKLKVTDANTINYVTETNADTIDKNHAI
                     YEKAKEVSSALSKVLSKIDDTSAELLTDDISDLKNNNDITAENNNIYKAAKDVTTSLS
                     KVLKNINKD"
     gene            complement(13988..14986)
                     /gene="ipaD"
                     /locus_tag="JNZ57_000315"
     CDS             complement(13988..14986)
                     /gene="ipaD"
                     /locus_tag="JNZ57_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system needle tip complex
                     protein IpaD"
                     /protein_id="HAY8826656.1"
                     /translation="MNITTLTNSISTSSFSPNNTNGSSTETVNSDIKTTTSSHPVSSL
                     TMLNDTLHNIRTTNQALKKDLSQKTLTKTSLEEIALHSSQISMDVNKSAQLLDILSKK
                     EYPINKDARELLHSAPKEAELDGYEMISHRELWDKIAKSINNINEQYLKVYEHAVSSY
                     TQMYQDFSAVLSSLAGWISPGGNDGNSVKLQVKSLKDELTKLKEKYKDKPLYPANNTV
                     SKEQANKWLTELGGTIGEVSEKNGGYVVNINMTPIDNMLKSLDNLGGNGEVVLDNAKY
                     QAWNAGFSAEDETMKNNLQTLVQKYSNANSIFDNLVKVLSSTISSCTDTDKLFLHF"
     gene            complement(15037..16128)
                     /gene="ipaC"
                     /locus_tag="JNZ57_000316"
     CDS             complement(15037..16128)
                     /gene="ipaC"
                     /locus_tag="JNZ57_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858260.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS translocon subunit IpaC"
                     /protein_id="HAY8826657.1"
                     /translation="MEIQNTKSASILYTDISTKQTQSSSETQKSQNYQQLAAHIPLNV
                     GKNPVLTTTLNDDQLLKLSEQVQHDSEIIARLTDKKMKDLSEMSHTITPENTLDISSL
                     SSNAVSLIISVAVLLSALRTAETRLGSQLSLIAFDATKSAAENIVRQGLAALSSSITG
                     AVTQVGITGIGAKKTHSGISEQKGALRKNLATAQSLEKELAGSKLGLNKQIDTNITSP
                     QTNSSTKILGKNKLAPDNISLSTEHKTSLSSPDISLQDKIDTQRRAYELNTLSAQQKQ
                     NIGRATMETSAVAGNISTSGGRYTSALEEEEQLISQASSKQAEEASQVSKEASQATNQ
                     LIQKLLNIIDNINQSRNSTASQIAGNIRA"
     gene            complement(16148..17890)
                     /gene="ipaB"
                     /locus_tag="JNZ57_000317"
     CDS             complement(16148..17890)
                     /gene="ipaB"
                     /locus_tag="JNZ57_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system translocon subunit
                     IpaB"
                     /protein_id="HAY8826658.1"
                     /translation="MHNVSTTNTGLPLAKILASTELGDNTIQAANDAANKLFSLTIAD
                     LTANKNINTTNAHSTSNILIPELKAPKSLNASSQLTLLIGNLIQILGEKSLTALTNKI
                     TAWKSQQQARQQKNLEFSDKINTLLSETEGLTRDYEKQINKLKNADSKIKDLENKINQ
                     IQTRLSELDPDSPENKKLRREEIQLTIKKDAAVKDRTLIEQKTLSIHSKLTDKSMQLE
                     KEIDSFSAFSNTASAEQLSTQQKSLTGLASVTQLMATFIQLVGKNNEESLKNDLALFQ
                     SLQESRKTEMERKSDEYAAEVRKAEELNRVMGCVGKILGALLTIVSVVAAAFSGGASL
                     ALAAVGLALMVTDAIVQAATGNSFMEQALNPIMKAVIEPLIKLLSDAFTKMLEGLGVD
                     SKKAKMIGSILGAIAGALVLVAAVVLVATVGKQAAAKLAENIGKIIGKTLTDLIPKFL
                     KNFSSQLDDLITNAVARLNKFLGAAGDEVISKQIISTHLNQAVLLGESVNSATQAGGN
                     VASAVFQNNASKNLADLTLSKYQVEQLSKYIGDAIEKFGQLQEVIAELLASMSNSQAN
                     RTDVAKAILQQTTA"
     gene            complement(17896..18363)
                     /gene="ipgC"
                     /locus_tag="JNZ57_000318"
     CDS             complement(17896..18363)
                     /gene="ipgC"
                     /locus_tag="JNZ57_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system translocator chaperone
                     IpgC"
                     /protein_id="HAY8826659.1"
                     /translation="MSLNITENESISTAVIDAINSGATLKDINAIPDDMMDDIYSYAY
                     DFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKN
                     DYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIKE"
     gene            complement(18421..19047)
                     /gene="ipgB"
                     /locus_tag="JNZ57_000319"
     CDS             complement(18421..19047)
                     /gene="ipgB"
                     /locus_tag="JNZ57_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein IpgB"
                     /protein_id="HAY8826660.1"
                     /translation="MQILNKILPQVEFAIPRPSFDSLSHNKLVKKILSVFNLKQRFPQ
                     KNFGCPVNINKIRDSVIDKIKDSNSGNQLFCWMSQERTSYVSSMINRSIDEMAIHNGV
                     VLTSDNKKNIFAAIEKKFPDIKLDEKSAQTSISHTALNEIASSGLRAKILKRYSSDMD
                     LFNTQMKDLTNLVSSSVYDKIFNESTKVLQIEISAEVLKAVYRQSNTN"
     gene            complement(19063..19452)
                     /gene="ipgA"
                     /locus_tag="JNZ57_000320"
     CDS             complement(19063..19452)
                     /gene="ipgA"
                     /locus_tag="JNZ57_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system chaperone IpgA"
                     /protein_id="HAY8826661.1"
                     /translation="MCRKLYDKLYEITGAKLDFNDKNQAFILLEEQIPVCITDNDEYI
                     FLTGLLNEHELFTENIINPEHILILNYSLSRDYGSSICLLPDTHQCVLTKKHYKKYLS
                     PDELIESLYEFLFCIKLTIANITSEVN"
     gene            complement(19465..20949)
                     /gene="icsB"
                     /locus_tag="JNZ57_000321"
     CDS             complement(19465..20949)
                     /gene="icsB"
                     /locus_tag="JNZ57_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector IcsB"
                     /protein_id="HAY8826662.1"
                     /translation="MILKISNFIDASNTKGPIRVEDTEHGPILVAQKFNLKDLFFRTL
                     STINAKINSQILNEQLKNYRLANQKSLLLFLKTLASEKSAESAFAAYEAVKNSIQHSF
                     TGKDIKLMLNTAESFHGIGTAKNLERHLVFRCWGNRGITHLGHTSISIKNNLLQEPTH
                     TYLSWYPGGNVTKDTEINYLFEKRSGYSVDTYKQDKLNMISDQTAERLDAGQEVRNLL
                     NSKQDQNNNKKIFFPRANQKKDPYGYWGVSADKVYIPLSGDNKTKDGKISYNLFGLDE
                     TNMSKFICQKKADAFRQLANYKLISKSENCAGMALNVLKAGNSEIYFPLPDVKLVATP
                     NNVYAYANKVRQRIESLNQSYNEIMKYIESDFDLSRLTQLRRSYLKSFNKINLIHTPK
                     TFKPLSISLYKHPTENVSSEDFDAVINACHSYLVKSAPSNMSRVLNELKIGATDKKEE
                     IIEKSIKTIDYYNSLKSPDLGTKLYIHDLLQVNKLLLNNSHSNI"
     gene            21263..22879
                     /locus_tag="JNZ57_000322"
     CDS             21263..22879
                     /locus_tag="JNZ57_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector inositol
                     phosphate phosphatase"
                     /protein_id="HAY8826663.1"
                     /translation="MHITNLGLHQVSFQSGDSYKGAEETGNQKGVSVISYQRVKNGER
                     NKGVEALNRLYLQNQTSLTGKGLLFARDRAAVFYEAIKLAGGDTSKIKAMMEQLDTYK
                     LGEVDKRNINELNKVISEEIGAQLGIKNKKELQSEIKQIFTNYLNNKNWEPINKNINY
                     HGKNYGFQLTPASHMKIGNKNIFVKEYNGKGICCASTRESEHIANMWLSKVVDDEGKE
                     IFSGIRHGVISAYGLKKNSSERAVAARNKAEELASAALYSRQELLSQALSGKTVDLKI
                     VSTSLLTPTSLTGGEESMLKDQVKALKGLNSKRGEPTKLLIRNSDGLLQEVKVNLKVV
                     TFNFGVNELALKMGLGWRNVDKLNGESICSLLGDNFLKNGVIGGWAAEAIEKNPPCKN
                     DVIYLANQIKEIVNKKLQKNDNGEPYKLSQRMALLAYTIGAVPCWNCKSGKDRTGMQD
                     AEIKREIIRKHETGQFSQLNSKLSSEEKRLFSTILMNSGNMEIQEMNTGVPGNKVMKK
                     LPLSSLELSYAERIGDPKIWNMVKGYSSFV"
     gene            22889..23251
                     /gene="ipgE"
                     /locus_tag="JNZ57_000323"
     CDS             22889..23251
                     /gene="ipgE"
                     /locus_tag="JNZ57_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system chaperone IpgE"
                     /protein_id="HAY8826664.1"
                     /translation="MEDLADVICRALGIPSIDTDDQAIMLDDDVLIYIEKEGDSINLL
                     CPFCALPENINDLIYALSLNYSEKICLATDDEGGSLIARLDLTGINEFEDIYVNTEYY
                     ISRVRWLKDEFARRMKGY"
     gene            23251..23709
                     /gene="ipgF"
                     /locus_tag="JNZ57_000324"
     CDS             23251..23709
                     /gene="ipgF"
                     /locus_tag="JNZ57_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein IpgF"
                     /protein_id="HAY8826665.1"
                     /translation="MSRFVFIFLCFIPYLGRADCWDKAGERYNIPSSLLKAIAEKESG
                     FNKFAVNVNNNGSKDYGIMQINDFHSKRLREMGYTEEMLISHPCLSVHYAAKLLNEFM
                     LMYGRGWEAVGAYNAGTSPKKKKERLKYAEDIYKRYLRIAAESKQNNRRI"
     gene            23718..24833
                     /gene="mxiG"
                     /locus_tag="JNZ57_000325"
     CDS             23718..24833
                     /gene="mxiG"
                     /locus_tag="JNZ57_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system protein MxiG"
                     /protein_id="HAY8826666.1"
                     /translation="MSEAKNSNLAPFRLLVKLTNGVGDEFPLYYGNNLIVLGRTIETL
                     EFGNDNFPENIIPVTDSKSDGIIYLAISKDNICQFSDEKGEQIDINSQFNSFEYDGVS
                     FQLKNMMEDKSRVHILNGMYNKPSVFFFFAVIVVLIIIFSLSLKKDEVKEIAEIIDDK
                     RYGIVNTEQCNYILAETQNDAVWASVALNKTGFTKCRYILVSNKEINRIQQYINQRFP
                     YINLYVLNLVSDKAELLVFLSKERNSSKDTELEKLKNALIVEFPYIKNIKFNYLSDHN
                     AREDAKGIFTKVNVQYKEICETNKVTYSVREELTDEKLELINRLISDYKNVYGDQYIE
                     FSVLLIDDDFKGKSYLNSKDSYVMLNDKHWFFLDKNK"
     gene            24841..25092
                     /locus_tag="JNZ57_000326"
     CDS             24841..25092
                     /locus_tag="JNZ57_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system needle complex
                     protein"
                     /protein_id="HAY8826667.1"
                     /translation="MSVTVPNKDWTLSSLSETFDDGTQTLQRQLTSALNALAENPSNP
                     QLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR"
     gene            25105..25398
                     /gene="mxiI"
                     /locus_tag="JNZ57_000327"
     CDS             25105..25398
                     /gene="mxiI"
                     /locus_tag="JNZ57_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system inner rod protein
                     MxiI"
                     /protein_id="HAY8826668.1"
                     /translation="MNYIYPVNQVDIIKASDFQSQEISSLEDVVSAKYSDIKMDTDIQ
                     VSQIMEMVSNPESLNPESLAKLQTTLSNYSIGVSLAGTLARKTVSAVETLLKS"
     gene            25404..26129
                     /locus_tag="JNZ57_000328"
     CDS             25404..26129
                     /locus_tag="JNZ57_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EscJ/YscJ/HrcJ family type III secretion inner
                     membrane ring protein"
                     /protein_id="HAY8826669.1"
                     /translation="MIRYKGFILFLLLMLIGCEQREELISNLSQRQANEIISVLERHN
                     ITARKVDGGKQGISVQVEKGTFASAVDLMRMYDLPNPERVDISQMFPTDSLVSSPRAE
                     KARLYSAIEQRLEQSLVSIGGVISAKIHVSYDLEEKNISSKPMHISVIAIYDSPKESE
                     LLVSNIKRFLKNTFSDVKYENISVILTPKEEYVYTNVQPVKEIKSEFLTNEVIYVFLG
                     MAVLVVILLVWAFKTGWFKRNKI"
     gene            26126..26653
                     /locus_tag="JNZ57_000329"
     CDS             26126..26653
                     /locus_tag="JNZ57_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion apparatus protein OrgA/MxiK"
                     /protein_id="HAY8826670.1"
                     /translation="MIRMDGIYKKYLSIIFDPAFYINRNRLNLPSELLENGVIRSEIN
                     NLIINKYDLNCDIEPLSGVTAMFVANWNLLPAVAYFIGSQESRLINHSEMVISYYGGK
                     ISKQGEAAIRSGFWHLIAWKENISVGIYERINLLFNPIALEGNYTPVERNLSRLNEGM
                     QYAKRHFTGIQTSCL"
     gene            26595..27290
                     /locus_tag="JNZ57_000330"
     CDS             26595..27290
                     /locus_tag="JNZ57_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858274.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MxiN"
                     /protein_id="HAY8826671.1"
                     /translation="MKVCNMQKGTLPVSRHHAYDGVVIKRIEKELCKTIKDRDTESKK
                     KAICIIKDATKKAESLRIDAVCDGYQIGIQTAFEHIIDYICEWKLKQNENRRNIEDYI
                     TSLLSENLHDERIISTLLEQWLSSLRNTVTELKVVLPKCNLALRKKLELDLHKYRSDV
                     KIILKYSEGNNYIFCSGNQVVEFSPQDVISGVKIELAEKLTKNDKKYFKELAHEKLRQ
                     IAEDLLKENPVND"
     gene            27283..27690
                     /locus_tag="JNZ57_000331"
     CDS             27283..27690
                     /locus_tag="JNZ57_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mxi-Spa secretion machinery protein MxiL"
                     /protein_id="HAY8826672.1"
                     /translation="MINQINASNALQQRLNSEEFVNLNERLSSSQSFDEDIIYEIMQY
                     FSQSELNSIDNDELHNKIEQLFNSRFPYLTAAQKSSLLNKLIDANQYVDLHEGFYASL
                     SIYNNIDFYIKTTTFDSLISVFEAGREADDSTW"
     gene            27674..28102
                     /gene="mxiM"
                     /locus_tag="JNZ57_000332"
     CDS             27674..28102
                     /gene="mxiM"
                     /locus_tag="JNZ57_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858276.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system pilotin MxiM"
                     /protein_id="HAY8826673.1"
                     /translation="MIRHGSNKLKIFILSILLLTLSGCALKSSSNSEKEWHIVPVSKD
                     YFSIPNDLLWSFNTTNKSINVYSKCISGKAVYSFNAGKFMGNFNVKEVDGCFMDAQKI
                     AIDKLFSMLKDGVVLKGNKINDTILIEKDGEVKLKLIRGI"
     gene            28232..28864
                     /gene="mxiE"
                     /locus_tag="JNZ57_000333"
     CDS             28232..28864
                     /gene="mxiE"
                     /locus_tag="JNZ57_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional activator MxiE"
                     /protein_id="HAY8826674.1"
                     /translation="MEGFFFVRNQNIKFSDNVNYHYRFNINSCAKFLAFWDYFSGALV
                     EHSHAEKCIHFYHENDLRDSCNTESMLDKLMLRFIFSSDQNVSNALAMIRMTESYHLV
                     LYLLRTIEKEKEVRIKSLTEHYGVSEAYFRSLCRKALGAKVKEQLNTWRLVNGLLDVF
                     LHNQTITSAAMNNGYASTSHFSNEIKTRLGFSARELSNITFLVKKINEKI"
     gene            28851..30551
                     /gene="mxiD"
                     /locus_tag="JNZ57_000334"
     CDS             28851..30551
                     /gene="mxiD"
                     /locus_tag="JNZ57_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system secretin MxiD"
                     /protein_id="HAY8826675.1"
                     /translation="MKKFNIKSLTLLIVLLPLIVNANNIDSHLLEQNDIAKYVAQSDT
                     VGSFFERFSALLNYPIVVSKQAAKKRISGEFDLSNPEEMLEKMTLLVGLIWYKDGNAL
                     YIYDSGELISKVILLENISLNYLIQYLKDANLYDHRYPIRGNISDKTFYISGPPALVE
                     LVANTATLLDKQVSSIGTDKVNFGVIKLKNTFVSDRTYNMRGEDIVIPGVATVVERLL
                     NNGKALSNRQAKNDPMPPFNITQKVSEDSNDFSFSSVTNSSILEDVSLIAYPETNSIL
                     VKGNDQQIQIIRDIITQLDVAKRHIELSLWIIDIDKSELNNLGVNWQGTASFGDSFGA
                     SFNMSSSASISTLDGNKFIASVMALNQKKKANVVSRPVILTQENIPAIFDNNRTFYVS
                     LVGERNSSLEHVTYGTLINVIPRFSSRGQIEMSLTIEDGTGNSQSNYNYNNENTSVLP
                     EVGRTKISTIARVPQGKSLLIGGYTHETNSNEIVSIPFLSSIPVIGNVFKYKTSNISN
                     IVRVFLIQPREIKESSYYNTAEYKSLISEREIQKTTQIIPSETTLLEDEKSLVSYLNY
                     "
     gene            30570..31637
                     /gene="mxiC"
                     /locus_tag="JNZ57_000335"
     CDS             30570..31637
                     /gene="mxiC"
                     /locus_tag="JNZ57_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system gatekeeper subunit
                     MxiC"
                     /protein_id="HAY8826676.1"
                     /translation="MLDVKNTGVFSSAFIDKLNAMTNSDDGDETADAELDSGLANSKY
                     IDSSDEMASALSSFINRRDLEKLKGTNSDSQERILDGEEDEINHKIFDLKRTLKDNLP
                     LDQDFIDRLKRYFKDPSDQVLALRELLNEKDLTAEQVESLTKIINEIISGSEKSVNAG
                     INSAIQAKLFGNKMKLEPQLLRACYRGFIMGNISTTDQYIEWLGNFGFNHRHTIVNFV
                     EQSLIVDMDSEKPSCNAYEFGFVLSKLIAIKMIRTSDVIFMKKLESSSLLKDGSLSAE
                     QLLLTLLYIFQYPSESEQILTSVIDVSRASHEDSVVYQTYLSSVNESPHDIFKSESER
                     EIAINILRELVTSAYKKELSR"
     gene            31650..33710
                     /gene="mxiA"
                     /locus_tag="JNZ57_000336"
                     /gene_synonym="virH"
     CDS             31650..33710
                     /gene="mxiA"
                     /locus_tag="JNZ57_000336"
                     /gene_synonym="virH"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system protein MxiA"
                     /protein_id="HAY8826677.1"
                     /translation="MIQSFLKQVSTKPELIILVLMVMIIAMLIIPLPTYLVDFLIGLN
                     IVLAILVFMGSFYIERILSFSTFPSVLLITTLFRLALSISTSRLILVDADAGKIITTF
                     GQFVIGDSLAVGFVIFSIVTVVQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADLK
                     AGIIDAAGAKERRSILERESQLYGSFDGAMKFIKGDAIAGIIIIFVNLIGGISVGMSQ
                     HGMSLSGALSTYTILTIGDGLVSQIPALLISISAGFIVTRVNGDSDNMGRNIMSQIFG
                     NPFVLIVTSALALAIGMLPGFPFFVFFLIAVTLTALFYYKKVVEKEKSLSESDSSGYT
                     GTFDIDNSNDSSLAMIENLDAISSETVPLILLFAENKISANDMEGLIERIRSQFFIDY
                     GVRLPTILYRTSNELKVDDIVLLINEVRADSFNIYFDKVCITDENGDIDALGIPVVST
                     SYNERVISWVDVSYTENLTNIDAKIKSAQDEFYHQLSQALLNNINEIFGIQETKNMLD
                     QFENRYPDLLKEVFRHVTIQRISEVLQRLLGENISVRNLKLIMESLALWAPREKDVIT
                     LVEHVRASLSRYICSKIAVSGEIKVVMLSGYIEDAIRKGIRQTSGGSFLNMDIEVSDE
                     VMETLAHALRELRNAKKNFVLLVSVDIRRFVKRLIDNRFKSILVISYAEIDEAYTINV
                     LKTI"
     gene            33723..34124
                     /gene="spaK"
                     /locus_tag="JNZ57_000337"
     CDS             33723..34124
                     /gene="spaK"
                     /locus_tag="JNZ57_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system chaperone SpaK"
                     /protein_id="HAY8826678.1"
                     /translation="MSNINLVQLVRDSLFTIGCPPSIITDLDSHSAITISLDSMPAIN
                     IALVNEQVMLWANFDAPSDVKLQSSAYNILNLMLMNFSYSINELVELHRSDEYLQLRV
                     VIKDDYVHDGIVFAEILHEFYQRMEILNEVL"
     gene            34128..35420
                     /locus_tag="JNZ57_000338"
     CDS             34128..35420
                     /locus_tag="JNZ57_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliI/YscN family ATPase"
                     /protein_id="HAY8826679.1"
                     /translation="MSYIKLLTQLSFPNRISGPILETSLSDVSIGEICNIQAGIESNE
                     IIARAQVVGFHDEKTILSLIGNSRGLSRQTLIKPTAQFLHTQVGRGLLGAVVNPLGEV
                     TDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGVKVIDSLLTCGEGQRMGIFAS
                     AGCGKTFLMNMLIEHSSADIYVIGLIGERGREVTETVDYLKNSEKKSRCVLVYATSDY
                     SSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPARRGYPV
                     SVFDSLPRLLERPGKLKAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLSRNLA
                     QKGQFPAIDSLKSISRVFTQVVDEKHRIMAAAFRELLSEIEELRTIIDFGEYKPGENA
                     SQDKIYNKISVVESFLKQDYRLGFTYEQTMELIGETIR"
     gene            35513..35851
                     /gene="spaM"
                     /locus_tag="JNZ57_000339"
     CDS             35513..35851
                     /gene="spaM"
                     /locus_tag="JNZ57_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface presentation of antigens protein SpaM"
                     /protein_id="HAY8826680.1"
                     /translation="MEALDKRIIYFLQLENDLEPIGAQSVSQLFNTRRKIAIVKKHII
                     QYQSERILLKGRIEEIQKDIDEANASKRKLLHKESKICKRIGLIKRNNFAKQLILDEL
                     SQEDMKYGIR"
     gene            35838..36716
                     /gene="spa32"
                     /locus_tag="JNZ57_000340"
     CDS             35838..36716
                     /gene="spa32"
                     /locus_tag="JNZ57_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system needle length
                     regulator Spa32"
                     /protein_id="HAY8826681.1"
                     /translation="MALDNINLNFSSDKQIEKCEKLSSIDNIDSLVLKKKRKVEIPEY
                     SLIASNYFTIDKHFEHKHDKGEIYSGIKNAFELRNERATYSDIPESMAIKENILIPDQ
                     DIKAREKINIGDMRGIFSYNKSGNADKNFERSHTSSVNPDNLLESDNRNGQIGLKNHS
                     LSIDKNIADIISLLNGSVAKSFELPVMNKNTADITPSMSLQEKSIVENDKNVFQKNSE
                     MTYHFKQWGAGHSVSISVESGSFVLKPSDQFVGNKLDLILKQDAEGNYRFDSSQHNKG
                     NKNNSTGYNEQSEEEC"
     gene            36710..37591
                     /gene="spaO"
                     /locus_tag="JNZ57_000341"
     CDS             36710..37591
                     /gene="spaO"
                     /locus_tag="JNZ57_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000944309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system protein SpaO"
                     /protein_id="HAY8826682.1"
                     /translation="MLRIKHFDANEKLQILYAKQLCERFSIQTFKNKFTGSESLVTLI
                     SLCGDWVIRIDTLSFLKKKYEVFSGFSTQESLLHLSKCVFIESSSVFSIPELSDKITF
                     RITNEIQYATTGSHLCCFSSSLGIIYFDKMPVLRNQVSLDLLHHLLEFCLGSSNVRLA
                     TLKRIRTGDIIIVQKLYNLLLCNQVIIGDYIVNDNNEAKINLSESNGESDHTEVSLAL
                     FNYDDINVKVDFILLEKKMTINELKMYVENELFKFPDDIVKHVNIKVNGSLVGHGELV
                     SIEDGYGIEISSWMVKE"
     gene            37596..38246
                     /gene="spaP"
                     /locus_tag="JNZ57_000342"
     CDS             37596..38246
                     /gene="spaP"
                     /locus_tag="JNZ57_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein SpaP"
                     /protein_id="HAY8826683.1"
                     /translation="MLSDMSLIATLSFFTLLPFLVAAGTCYIKFSIVFVMVRNALGLQ
                     QVPSNMTLNGIALIMALFVMKPIIEAGYENYLNGPQKFDTISDIVRFSDSGLIEYKQY
                     LKKHTDLELARFFQRSEEENADLKSAENNDYSLFSLLPAYALSEIKDAFKIGFYLYLP
                     FIVVDLVISSILLALGMMMMSPITISVPIKLVLFVALDGWGILSKALIEQYINVPA"
     gene            38261..38521
                     /gene="spaQ"
                     /locus_tag="JNZ57_000343"
     CDS             38261..38521
                     /gene="spaQ"
                     /locus_tag="JNZ57_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein SpaQ"
                     /protein_id="HAY8826684.1"
                     /translation="MSDIVYMGNKALYLILIFSLWPVGIATVIGLTIGLLQTVTQLQE
                     QTLPFGIKLIGVSISLLLLSGWYGEVLLSFCHEIMFLIKSGV"
     gene            38521..39291
                     /gene="spaR"
                     /locus_tag="JNZ57_000344"
     CDS             38521..39291
                     /gene="spaR"
                     /locus_tag="JNZ57_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858288.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein SpaR"
                     /protein_id="HAY8826685.1"
                     /translation="MDISSWFESIHVFLILLNGVFFRLAPLFFFLPFLNNGIISPSIR
                     IPVIFLVASGLITSGKVDIGSSVFEHVYFLMFKEIIVGLLLSFCLSLPFWIFHAVGSI
                     IDNQRGATLSSSIDPANGVDTSELAKFFNLFSAVVFLYSGGMVFILESIQLSYNICPL
                     FSQCSFRVSNILTFLTLLASQAVILASPVMIVLLLSEVLLGVLSRFAPQMNAFSVSLT
                     IKSLLAIFIIFICSSTIYFSKVQFFLGEHKFFTNLFVR"
     gene            39298..40326
                     /gene="spaS"
                     /locus_tag="JNZ57_000345"
     CDS             39298..40326
                     /gene="spaS"
                     /locus_tag="JNZ57_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     switch protein SpaS"
                     /protein_id="HAY8826686.1"
                     /translation="MANKTEKPTPKKLKDAAKKGQSFKFKDLTTVVIILVGTFTIISF
                     FSLSDVMLLYRYVIINDFEINEGKYFFAVVIVFFKIIGFPLFFCVLSAVLPTLVQTKF
                     VLATKAIKIDFSVLNPVKGLKKIFSIKTIKEFFKSILLLIILALTTYFFWINDRKIIF
                     SQVFSSVDGLYLIWGGLFKDIILFFLAFSIFVIILDFVIEFILYMKDMMMDKQEIKRE
                     YIEQEGHFETKSRRRELHIEILSEQTKSDIRNSKLVVMNPTHIAIGIYFNPEIAPAPF
                     ISLIETNQCALAVRKYANEVGIPTVRDVKLARKLYKTHTKYSFVDFEHLDEVLRLIVW
                     LEQVENTH"
     gene            40339..40581
                     /locus_tag="JNZ57_000346"
     CDS             40339..40581
                     /locus_tag="JNZ57_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010921676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8826687.1"
                     /translation="MCYMGVNFCNKIGIDQSEFEIESSIINSIANEVLNPISFLSNKD
                     IINVLLRKISSECDLVRKDIYRCALELVVEKTPDDL"
BASE COUNT        12503 a         6683 c         8577 g        13494 t
ORIGIN      
        1 ttgctgaact gctggaaccg ctgtatgaca tcctgcgcca gtatgtgctg atgcccggta
       61 aagtccatac cgatgatatc cccgttccgg tcctggagcc gggcagcggt aaaacaagga
      121 ctgcccggct gtgggtctac gttcgtgatg accgtaacgc cggttcggaa attgcagcat
      181 aagttatcca tgctctgagg tgggtggagg tgggccctcc ggtcagggtt tacaggagca
      241 ctgaccaaac gacccggtgc tgcttcattc taaggaatga ggtggtgagc gactcgggaa
      301 aaggcagaga tctactgtca cgtggggttc gggaagctga acgaaagtaa actgtccgat
      361 gaaacatcga aatcttagat gatgtcaaaa tggggccgta cagccgtccc ctgataagcg
      421 cagaagacac ctgcttactg actgcgcggc atccggtgtg aaggcagcag gatcccgggc
      481 cagaccatct cagggaacgt gagaacctgt ttccggcacg tatcgggaaa caggggcggc
      541 cccattcgta gtagtgatga aagatctgta atgggtctgg agcgaaggga tggggatcac
      601 attcattgca gaagacacaa cccaaaaggg gatgacgtaa ctgatgcaac gaaaatcatt
      661 tgaaatacca aaagcactgg tctgggcatc atatctggat gtgcgtcgca acaagggagc
      721 cccccggatg cgacgggcag actttgaaaa tgttcgacca gcaacgtgat ggcaatctat
      781 acaagatctg gaaccggcta tgttcgggaa catggtttcc gccaccagtg ctggaaaaac
      841 ggatcccgaa gtcgaatggc aaggaacgca ttctggggat cccaacagta tccgatcgaa
      901 ttgctcaggg agcgataaaa cttttcatgg aagaaaagct tgactcgatt ttccatgctg
      961 attcatatgg ttaccgacca ggcaaatcag ctcatgacgc tctgaaacaa tgtgccatcc
     1021 ggtgctggcg ttatagctgg atactggaag tggacatcag tgcgtttttc gaccatgtga
     1081 aacatgatct ggtgctcaaa gctctggaac accacgggat gcctaaatgg gtcatcctgt
     1141 actgtcgacg ctggatggaa gcgccaatgc agagttgtga aaatggagaa ttaataaccc
     1201 gaacacgagg cactccgcag ggcggggtca ttagtccgct acttgctaac ttgttccttc
     1261 actatgcatt tgatttgtgg atggaaagag aatatcgggg ggtaccgttt gagaggtacg
     1321 ctgacgatat tgtagtacat tgttcacgaa tgagtgatgc aacaaggcta aagaacaggt
     1381 tatcggagcg cttctcggaa gtcgggctgg tcctgaatgc agggaaaacg aatatcgcct
     1441 acattgacac gtttaaaagg agaaacgtcg caacgagttt cacctttctc ggatatgact
     1501 tcaaagtgcg tacgctgaag aatttcaaag gcgaacggta ccgaaaatgc atgccgggtg
     1561 cgtcaaatgc agcaatgcgc aaaataacag aaacaatcaa gaagtggcgt atacatcgct
     1621 caacagctga gagtttgctg gattttgcga ggcgctacaa tgcgatagtg agaggctgga
     1681 tcgagtacta cggaaagttc tggtccagaa atttcaacta tcgactgtgg agtgcaatgc
     1741 agtcacgtct gctcaagtgg atgcagtcta aatacagact ttcgaaccgg aaggctcagc
     1801 gaaagctgac gctggtaagg aaggagtatc cgaagctatt tgttcactgg tatttactac
     1861 gtgcatcaaa tgagtgatca agagccgtat gacgcgagag tgtcacgtac ggttccgtga
     1921 gcagccgggg agtgaaattc tctccggctg actcgactcg cgggttccga cagcgatgac
     1981 gaacatgcgg cggtgttgta ctcgctgatc ggcacatgcc gtctgaacaa tgtggaacca
     2041 gaaaaatggc tgcgttacgt cattgagcat atccaggact ggccggcaaa tcgggtacgt
     2101 gatctgttgc cctggaaagt tgatctgagc tctcagtaaa tatcaatacg gttctgacga
     2161 gccgcttact tttggcgtaa ttctgctgcg cctttactga acacaatgcc gtattcagca
     2221 agaagtccac gaatgtgatt tatcagttgt gtcctttcca ttgaaaccaa ccgacgcata
     2281 ttcaaaaaag tctggacgtc ctgttgctcc agagttttta ttggtacggg tcgtatagtt
     2341 ccatgttggc aggcctcagc tattgcctgt gcgtcgttat aatcattttt ctggcaccgc
     2401 tgataagctt taacatgttg tgccggaagc aatattacat catggtcgag tttcctgatt
     2461 tcccgggccc agtaatgaga tgccccgcca gcctccatcg caacagtcat tttaggctgt
     2521 tgcaccagcc agttaagcag ttgattgcga gaaagtttgg tctttcctgc gggtttgcca
     2581 tgagcattga tactgaaaag ataaaagttc gttttagcca gatcaatgcc ggtgattttc
     2641 tgttcagaca tggtattccg cttacttttg tggttaaagt ttatccatca tggcgcaatt
     2701 gaaggctgcc gtgaaagagg gggaagacta tctcatcggt tactgttaaa cggctaagag
     2761 aaactatctt tttcaagcaa agaagatacg gtgaaacagg cgatttcacc gtgaaatact
     2821 gttcaaaaaa aacgctaata aaagcaaaat ttcttttaaa acagccaatt aaaaactggt
     2881 gagttgctgg cgaaaaactt gaattttcac agcgaattca gattatcttt tagtacaaga
     2941 gcaatcatac gatctaactt atcctgaact tccaacggta atctgccgaa ttcatatgag
     3001 aacgtacgtc cctttactcg ttttcgagca aatttatctt tactatcaaa tttccataac
     3061 aaagttacaa ccgctttatc ctttactcct gaatcaagca atgaagacat ttccttggtt
     3121 ataagccgca taatactgtt tttaacctcg tcttcagaaa gattgtcatc agcagtaata
     3181 agctcaatac tcggcgagat attcttcaca acttcatcaa tagatatatc acccagcctc
     3241 agtcgttcac ttaattcagc cagttgcctg taatcggcgt atgtcagctc agactgaaca
     3301 ggaaaaagag acacaaaatc tttaggtacg gacgctgctt ggagggcacg agtcacctta
     3361 gctgccgaca atccctctct ttccgcaatt tgcttctggt tcataccggc ctctttgaga
     3421 cgtactaaac gcaacccaat ttcacgaata ttatgttcaa gtgacgtctg caaatctttc
     3481 gccagatgct gagcttcaga aacagtaagc tcatcatccg ttacaagtac acgtaatcca
     3541 accttgcata gcaaagctgc tgcccgacga cgggaaccat ccaaaatctc aataagatcg
     3601 ccagtccgaa tcccaataca tggatagaat tgttgtaaac gtatagttct ggtgatgtct
     3661 tttagtgagt ccggcgtcag ggctgtctgt tcgcggccat tcacctcttc aaccacaaaa
     3721 gtttgagtgt ccactttgtc atgatcaacc ttgatctcag taaattttgc ctttcggcca
     3781 gtattgaggg taaatacatg aactggagcc gatatttctt cagtattatt caggatattt
     3841 gtattcagcg tacggccaat agtcggtcgg tgctttctgt tttccatcag tagttggccc
     3901 ttataaattc aatacgatca aaaactgctt tagcgaaatc ttctgctgcc atacgtgcat
     3961 ttttcaaagc ttcaccactg ccaacataag taacaggatt cgcagatatc acggtatcaa
     4021 acgactcgcc gcttctctca aaaccatcaa gacgtggcat tgaaacatca agcatgtcac
     4081 caccgaaaat ctcttttgtc aggctatggc agtatttatg atctgactta ttcgccagtt
     4141 tcgacatgaa gccaatattt gcctgcaaac ggcatgaaca tccatcctgt tcaataatct
     4201 gtacaagttc aggtaaacga gccaaatatt taagcgtgga atggaaatca acttgtgctg
     4261 gcggcaccgg tgtaaacatg atatctgcgg cagcaatggc atttttcaaa aatgcgtcca
     4321 gatgcgggcc tgtatcaata aggatgaagt cgaaatcatg cttcagctta tcaataatat
     4381 tctcacgcaa tatcgcgtgt ttgttttgtc ctaatagatg ctcctcgcac agagtatccc
     4441 agtttgatgc aataaaggcg tcgtcaatag aagccggcat aacataaacg ccagggataa
     4501 ctgacggaac gataaaatct tccagtaatt cctcacgact cacgttctgc aacatagcct
     4561 gcggtgcggt tgtatcaacc agccccaccg catgcaagta gttcagaaac atagtggctg
     4621 atgactgggg atctaaatca aggagcagaa tacgtaaatc ttctgacagc aggtgaggat
     4681 gagcacgcag ggcgtgagct acggaaacac tactcacggt tttagacaca ccgcctttta
     4741 gactaccgat gaatatggaa tatgcctcac tataacgatc gcgatattta ggaatgccac
     4801 gatgtgcata gatatcgata atgttctgga tggttaatgc atattttgtc gcggttcctg
     4861 ctgggcgttt ttcaaactga tagccctgag cctccatctc accgactgca ccatccacgc
     4921 ttgcgcgcgt taattttgga agcttagcta cagcagactt tgaatagact tgataaaaaa
     4981 catcagcctg aaactcctgc ttttgctcct gaatctgttt tgttagggcg agcaacattt
     5041 tatctgcacg ctgcgcaacc ttacttaact gctcaaaact agtcattccc cctccgtgct
     5101 atgtaggatt ttaacttatt acaaaaaaaa ctgcattagc agggtaatgc atgcaagtgc
     5161 atattgtaca tgcttatatt aaaaatgcgc gcattgctga tttattaatc atcggaatga
     5221 atattactgt aagatagtat gcctttccgg gagaaagacg ctgatttccc ccgaataatc
     5281 cagttcacaa ccacactccg gacaacagct ttcttcaggc tccagatggt atatttcgcg
     5341 ggaaacatgt tccggtaacg gacggcgatg acgtgactgt cgcaacaggc gggggtagtg
     5401 cttccaatca gtagaacatg tgcttttcaa tgaaggagcc gatgactttt tcgtggattt
     5461 ccacggaacg cgagaagcag attgttttac gtgccagccg cttgatgcgg gtgcggaggg
     5521 tccggttgtt acgttcaata cgttgcgtga agattttgcc ggtcaggtgt ttctccttcg
     5581 gcacttctct ggcgtagctg ccccagtcat cgcggtcacc atgccgatac agaacggagt
     5641 caacagggct aacagttccc gacaggtctc atcattccgt ggcccgaaag tgtaagccaa
     5701 cacaccgcca gttttagtgt tgtacgcata ccagagccag tgttgtgtca acgacggatg
     5761 aaaagtgatc cacttatatc tccaccaacg gcccaatatt gatccaccgt tttactcagg
     5821 attagcttct gctataaccc cggcctttcg tttctgtctg agtcgatagc tttctccttt
     5881 gatttgaacg acatgtgagt ggtgtaagat acggcccagc atcgctgagg tcagtgctgc
     5941 atcaccggcg aacgtttgat cccactgccc gaacggtaga ttggatgtca ggatcattgc
     6001 gctcttttca taacgtttag cgatgacctg gaagaacagt tttgcttctt tctgactgaa
     6061 cggcagatag cctatttcat caatgatgag caggcggggg gccattactc cacgctgaag
     6121 cgtcgtttta taacggccct gacgttgtgc cgtagataac tgaagtaaca gatctgctgc
     6181 tgttgtgaag cgaacttgga tacctgcacg gactgcttca tagcccatcg ctattgccag
     6241 atgggttttc cccacacctg atggccccag taatacgata ttttcattac gttctatgag
     6301 gctgagtgag cgtaacgact ggagttgctt ctgcggtgct ccggtggcga atgtgaagtc
     6361 atactcttcg aacattttca ccgccgggaa ggctgccatt cgggtataca tcgcctgttt
     6421 acgttgatga cgtgccagtt tttcttcatg aagcagatgc tccaggaagt ccatataact
     6481 ccattcctgg tctactgcct gttgtgacag cgcaggcgct gcgcttataa ggctttccag
     6541 ttgcaactgc ccggcgagcg ccatcagtcg ttgatgttgc agttccatca tcacgccact
     6601 cctctgcaga atgagtcgta gatggagagt ggatgatgct gggggggggt tgtcgaagct
     6661 caccagattt tcaccaggat gcacgtcata ctcttttttc tccggaggca gtgccagcat
     6721 ggactgctgc tcttcgagcc agcgatcaca gggacgggcc tggattgttt catgctttcg
     6781 ttggttagcg acatcgtgca gccagcgcag accgtggcgg ttggctgttt caacatcgac
     6841 agtgctcccc atcgggcgca ggcgagtcat tagtgggatg taaaaactgt tacgggtgta
     6901 ctgcaccatc cgttccacct tacctttagt ctgtgccctg aaggggcgac acagtcgggg
     6961 agagaagccc atctccttgc cgaactgcca cagcgaagga tggaaccggt gctgaccggt
     7021 ctgatatgcg tcacgttgca gaaccacagt tttcatattg tcatacaaca cttcgcgcgg
     7081 cacaccacca aagaagcgga acgcattacg atggcaggtc tccagcgtgt cataacgcat
     7141 attgtcagtg aattcgatgt acaacattcg gctgtatccg ggaacagcaa cgaacacgtg
     7201 aagcggtgag cgaccattac gcatagtgcc ccagtcaacc tgcatctgtc gtccgggttc
     7261 agtttcgaac cgaacggcag gctcctgctc ctgaggaacc gagagagaac gaatgaatgc
     7321 cctgagaatg gtcattccgc cacgatatcc ctggtctctg atctcgcgag cgattaccgt
     7381 tgccgggatt ttgtaaggat gagcatcggc gatgcgttga cgaatataat cccggtattc
     7441 atccaggagt gaagcaacag caggtcgcgg cgtatatttt ggcggctcag attttgcctg
     7501 caaataacgt ttaacggtat tgcgggagag ccccagttct ctggcaatcg cccggctact
     7561 cattccctgc ttgtgcagga ttttaatttc cataactgtc tcaaaagtga ccataagctc
     7621 tcctgaatca ggagagcaga ttaccccctg gatctgattt caggcgttgg gtgtggatca
     7681 ctattgcacc gttcgtgaca cttgttgact gcctgtgcgg catctggtat caaggtggcg
     7741 tgaagccggt tcaggttctc atgcggaacg ttggaaccta tatccccccg ataccaaagg
     7801 cgaaatgtaa gtgacaaaat gcaatgaaca cgttctccgt taactgagga gcatggtgat
     7861 aaataaaggt aaatgcagaa ggtgtagagt ctcgcagatt tctgacatca tagagcctaa
     7921 cattagatgc ataacgctac agattgtaga atctctacag gtgaaatata cactggttgg
     7981 cgtttatgtc gcaaaacatg tcattcaggt tcatctcacc aataaggata tgagtgaagt
     8041 ggaggataag tgagtctgct gtcagagttt tctggtgtat gtcagtaact gcgaaccatg
     8101 tctgcttgat atgggagctt atggaggccc tctgtacaag gttagggagc taacaaagca
     8161 gggataaaaa gtccgcctga tgcaggcacg gttcgttaaa tcttttgcca ttggtaacaa
     8221 aatggtgcga tgaatgttca ggctatcttt atcttgatgg tggttcagct gtttggtaaa
     8281 gaaatcgctg taacaataga agaactgcag gtagtactgg tcccacatcg tttgctcagt
     8341 caactggtga agttccgtag cgcgtaaatt aatgctttgc atgaaacgtt actggagtgg
     8401 atgaaagaat acctgcatat atcattactg cgttggatta ccagtacaac agattgaatg
     8461 aactggacat gttgatagac ggcattgaaa agcagcttat aagcatagtg cggcagagtt
     8521 aattggagag cacttcgcct tctgagtatt aagtaagcat ggtggtacct gcggatacta
     8581 tctattcact gtgctcggtc ggcagcctta ctgaccaagg agttggggga gttgataaca
     8641 aagttgaaaa aacagctctc aaccaaggtg gttattgtaa caatagcaaa taagctggtg
     8701 tgacctgtat cacaataacc gattatggac gtaaatacga caaaaatatg tcagtatcag
     8761 gcggtattaa ttgctgatgc tgatggacat taactcttaa taaaagggtg gatgctgaaa
     8821 ggttgttatg gtgacggacg tgatgacgac ggaaaagagt atgaggtttt ggatttaaag
     8881 ttcgttcggg gaataaggac ccggtcagct aattctcata gtagttcgca ttgctggatg
     8941 caatactgtg ctgcaattac tcgtcgatgt cggaacaacg gaagccttgc aaacggggat
     9001 gtattcatac aggtgttatg ttatatgggg ttttattgca gggggctata ccaagagaat
     9061 atatgatatc tcatcagact gatgtgaggg taaatgagaa tagagtaaac gaacaaggtt
     9121 gttttttggc gaggaagcag atgtatgaca attcttgtgg agctgccagt ttactctgtg
     9181 ccgcaaagga attaggggtt gataaaatac cacaatacaa agggtctatg tccgaaatga
     9241 caaggaagag ttctcttgat ttggataatc gttgtgagcg ggatttatac ttaataacta
     9301 gtggtaatta taatccgaga atacacaaag ataatatcgc ggatgccggt tattctatgc
     9361 ctgataagat agtcatggct acgaggcttc ttggattgaa tgcttatgtc gttgaagaaa
     9421 gtaacatttt ttcgcaagta attagtttta tttatcccga tgcaagggac ttattaattg
     9481 gcatgggatg taatatagta catcaacgag atgtgttatc ttctaaccaa agagttttgg
     9541 aagctgttgc tgtatccttt attggagttc ctgtcggcct ccactgggtg ttgtgtagac
     9601 ctgatggaag ctatatggat ccagctgtag gagaaaatta ttcttgtttt tcaactatgg
     9661 aattaggtgc aagaagaagt aattctaact ttataggata tactaaaata ggtatttcca
     9721 tagttataac taatgaggct ttgtaaattg tcgtttttta tctgtgaagg agcttgaata
     9781 ttttggggcg gggggcataa caaatgatat tactgagtac aaatttagct atattgggcg
     9841 gattagttgt gtgggaagac gaaatgtttc tcttgaaata agtgaactcc ctcaaggaat
     9901 gattgagtgc ttaaatattt aagtgctggt aagtttgaga aggctggcat attttgcaga
     9961 gcaaacagtg attgacttgg atgatatttt tattttagtc actcgttgta attggagtat
    10021 gctttatttt atttgaaaat agatgtattt tatacccgca atttaaactg taagccctat
    10081 gaggggtatg gatattataa gttactcttt gactaagcat aacttttggg ggtagaaaaa
    10141 taaatctctt gttaataatt aacatgattt taaaatcaaa cttgtttata attataaaat
    10201 aatgtaagtc ggtcatttta tgggaagatt aggagaataa aacagtaatt atatttgaga
    10261 aatctgctaa tatattctta aagctttttt gatactgtga acgaagtctg ttaatggtga
    10321 attttttgtt tatcaccatg taaaaaaatt gagtagtaaa agcgttgact gctaatcctc
    10381 gctgttttta ttgaaacgat taaaaatacg ctgaatattt tcggccagtc actcatcttc
    10441 acataaaatt ttgaccatca tgccgcatcc cttagttgca caattcattt tcaatgatat
    10501 gaatattact aatttcacca gataatgttc tcgtggtcag cagggtatga gttttcaccg
    10561 taattttaag gaaacacagt gcgtggggat tgaataacag atagccgacg gaattacccc
    10621 accggctgaa agtcaagttc aacgaagatt tttattatct gaattgggca gtttacatca
    10681 gtgttcgatg tttatgaaga cgatagatgg cgagaaatta tatcccgaat agcttcatct
    10741 atttctctct gaactgtttt gtttatttta gataatgtaa atattagagt tctgtttgtt
    10801 ttattctctt ttctttttat gtaagtccgt ttgtctttag aaataaataa cgagtcaact
    10861 tttagcgaag ggttttgctt tctgtttttg cttttcttta tgatgtttaa aatttctttt
    10921 ttatatatgt ccgggggcaa atttgtatca aggtctttta tttcttcctt taatattggt
    10981 agtgtagaac taagagattc attagccttt tcaagtcctt tataataatt gaataatatc
    11041 ttgtagtcat taaagttaag ttctgacgcg attggaaata gagatattat ttcctgagga
    11101 acgcttgctg cctgaaaggc acgagtgact ttcgcgcgag acagattctc ttttttggct
    11161 atgtctttat aggacatccc tgatactttc agaaaattaa gaccaatacc aagttctcgg
    11221 atgctatgct cttttgctgt ttgtatatcg tttgctagtt ttctggcatc aagagtagat
    11281 atatattctt ttgaatatag aacttcaaga tctgctcctg catatattgc agatgctctt
    11341 ctacgagtgc catccagaat ttcaattcta ccatcaatct cccttcctat tacagggaag
    11401 aattgttgta gctttatagt ttttatgata tcggctaatg attcttctgt tagggattct
    11461 tgatcgcgta cattcgtttt ttggttgacg aaggttaaat cttggatcct tttatgagga
    11521 atcttagctt tgataaagga aactttatta ccagaatgga gtgtaaactc tttcttttgg
    11581 ccttccttta tacttaacaa gtcgttgcac aaatccacca tatcacaccc tgtttattca
    11641 tattgattta tattgacaaa agttaaatgc agtgtgagca agattgtatg taactgttga
    11701 tgatagtcaa cggtagtctt aaaaattact attttaatag ctggattgat gcaatttatc
    11761 tttattggat aaaagaataa tattcttgtg gagctctgat gtgagagctc catagatgaa
    11821 aaaatgctta tcaattacta tattgatttt gtactatttt tgactacaga aataagatct
    11881 ccaatagtaa taatgtgttc taatgcagat tcatctatac gtagattgaa ctcaaaacta
    11941 atcatatcca gcatttcaat cagagaaaga gaatcggcag aaagatcttc aataaattta
    12001 gtttcttcag atagtttgct gtacgctata ccatagcaaa aggccactat tgataatatt
    12061 ttttctttta tcatatttta atccttattg atattcttta atacttttga tagggaagtg
    12121 gttacatctt ttgctgcttt atatatatta ttgttttcag ctgtaatatc attgttattt
    12181 tttaaatcag atatatcatc tgtaagtaat tctgcagagg tatcgtcaat ttttgacaat
    12241 accttgctga gggcgctaga tacttctttt gccttttcat agatcgcatg atttttatca
    12301 attgtatctg cgttggtttc tgttacgtag tttattgtat ttgcatctgt aacttttaat
    12361 ttgttgttta ttctgtgttc tgttgtggat tttgtaatgt cctttgattt ttcctgtaac
    12421 tctcgttctt gtgttcctga tttagttcca atgagagata taagattact tagggagttt
    12481 gttacttttt ttgaagcttc aaatatcgtt tcccgtgtta aatatgtgtc tccatttctt
    12541 gataaaaaat cagtctgaag tacttttgaa tcagtgtttg agttgaattt attgatttgc
    12601 gaagctactc tatgagaaag agaagcgcta cttttagttg tatctgatga gttatcatta
    12661 ctgcttgtca ctccttccgg gtggagaggg ggggtggttg aagagttctg tatgttcaga
    12721 ggcctgtgtc cccgagaaag agagttattt gtagatcttt cttgactact cgtagttaac
    12781 aggtctgaac ctattccatc cgaattatct ggagtatggt tgaaaacctt ttctaaagct
    12841 gaattatttg caaatgtctg gacagtatct gatatagagt gtggtagaac ggaagttact
    12901 ttttgaacta gtgctctttg tggatttagt aatgagtttc cgttacggga taatagatcg
    12961 tttgtctgag aagtaggaga ctgtgcatca ttttctgggt tctcgtgata gctattgtca
    13021 tatactctgt tgtcaaaaac tctattatcg taagttctat tatcattatt tatatgatag
    13081 tgaattacag gttgggatgt tttctcattg gctccggggg ttggtccgcc atctggcata
    13141 tcttcgggag gtgtagggag gccatcttgg ataggatgcg aatcttttat atcttctaaa
    13201 atatcattaa ggacttttct caacagctca ggaaacacgg ctactgtatt taagtctctt
    13261 gacagtttac ctataccaaa tcctttacta tcaatagtat ttttacgttg attgcgcaaa
    13321 ctatcaaagg caagttttgc ctgtgcgtca actaaatcat ctagtttgag agatgaaaca
    13381 gtttcattac ttaactttaa ttcagcaaga atattattct tgataaatga tgatacttca
    13441 gtattgagga gtttttgtcc caatgataaa gcttcaccag atgtgtgttg ttgtgctaat
    13501 agtgcaagtc tgtgctcaat gttttgtcgt aattgatgga gtttcttatt ctttgccgac
    13561 catggtccaa aggcagaatc ttgggataat ttatctttta taattagttc cgaatactgt
    13621 gcgacaattt tttgaagtcc cttttcgttt tcaaaattaa gaccattttg atgtactaag
    13681 gagtacaaaa catttgaaaa ttcgagaatc tcgcttttgg catacgcatt cattgagttg
    13741 gaataaatgc ttcttaacac atcttctttc cctgaggaag aaaataaaaa atcaagacat
    13801 ttctgattaa aagacgttgc aaagttttct ttttcagaca ctgatgctgg tgtttttaga
    13861 gaagtttgcg aactatggat atcggatatt ttgcttttta actcgctgta ttctgttgat
    13921 gatggtgaag ttgccttata taagaatgtt ggcgcttgag tattatttac attatgcatg
    13981 gcgcacctca gaaatggaga aaaagtttat ctgtatctgt acatgagctt attgtactac
    14041 tcaaaacctt tactaaatta tcaaaaatac tattggcatt actgtatttt tgaactaaag
    14101 tttgaagatt atttttcatt gtttcatctt cggcagagaa tccggcattc catgcctgat
    14161 attttgcatt atctagcaca acctcgccat ttccacctag attatctaag ctttttaaca
    14221 tattgtctat tggggtcatg tttatattga caacatatcc cccgtttttt tcagatacct
    14281 cgccgattgt tccacctaat tctgtaagcc atttatttgc ttgttcctta ctaacagtat
    14341 tatttgctgg atatagcggt ttatctttat atttttcctt gagctttgtc aattcgtctt
    14401 taagcgattt gacttgtaat ttcacggagt ttccgtcgtt acctccggga gagatccagc
    14461 cggcaagact ggaaagaaca gcgctaaaat cttgatacat ttgagtatat gaactaacgg
    14521 catgttcata tactttcaga tactgttcat taatattatt gattgacttt gcaattttat
    14581 cccacagttc tctgtgagat atcatttcat atccatcaag ctcggcttct ttcggggctg
    14641 aatgtaataa ttctcttgcg tctttattaa ttggatattc tttcttggaa agaatatcca
    14701 atagttgagc ggatttgttt acatccatgc taatctgaga tgaatgtaat gctatttctt
    14761 ctagcgatgt tttagtcaac gttttttgtg agagatcttt ctttaatgcc tgatttgttg
    14821 ttctgatatt atgaagggtg tcgttgagca tagtaaggga acttacagga tgagaactgg
    14881 tcgttgtttt tatatcagaa ttaactgttt cggttgatga accgttggta ttgtttgggc
    14941 tgaatgatga ggtggaaata ctattagtca gagttgttat attcatggtt atttccttat
    15001 aggaagagcc atatattatt atggctcttg gatatattaa gctcgaatgt taccagcaat
    15061 ctgactggct gtagaattcc ttgattggtt gatgttgtca attatattca ataatttttg
    15121 tattaattga tttgtcgctt gggatgcttc tttagatact tgggatgctt cctctgcttg
    15181 tttactgctg gcctgactga ttagttgttc ttcttcttca agagcagatg tataacgccc
    15241 tcctgatgtg gatatattac cagcaacggc tgatgtctcc attgttgcac ggccaatgtt
    15301 ttgtttttgc tgagcagaaa gggtattgag ctcgtaagct cttctctggg tgtcaatttt
    15361 atcctgcaaa gaaatatcgg gagaactaag agaagtttta tgttcagttg acagggatat
    15421 attatctggt gccagtttat ttttacctaa aatttttgtg ctagagttag tttgtggtga
    15481 ggtgatattt gtatctattt gtttatttaa ccctaattta gaacctgcaa gctctttttc
    15541 aagagattga gcagtggcaa ggttctttct taaggctcct ttttgttcgc ttatccctga
    15601 atgcgttttt ttggcaccga tacccgttat acctacttgt gtgaccgctc cagtaatgct
    15661 tgatgatagg gctgctaggc cttgccgaac aatgttctct gcagctgatt ttgtagcatc
    15721 gaacgcaatc aatgacaatt gagagcccaa tctagtttct gcagtgcgga gagcagaaag
    15781 tagaacggct acactaataa ttaaagaaac agcattagaa gaaagactgg aaatatccag
    15841 ggtgttctct ggagtaattg tgtgactcat ttctgaaaga tctttcatct ttttgtcagt
    15901 aaggcgagca atgatttctg aatcatgctg aacctgctct gataacttca aaagttgatc
    15961 atcatttaat gtagttgtta atacgggatt tttaccgaca ttaagtggaa tatgtgctgc
    16021 taactgctga taattttgtg atttttgtgt ttcggaagaa ctttgagttt gttttgtgga
    16081 tatatctgta tataaaatcg aggctgattt tgtgttttga atttccataa cattctcctt
    16141 atttgtatca agcagtagtt tgttgcaaaa ttgcttttgc aacatcagtt ctattagcct
    16201 gagagttgga cattgaggct aacagctctg caattacttc ctgcaattgg ccgaattttt
    16261 ctattgcgtc accgatgtat tttgacagtt gttcaacttg atatttcgat aatgtcaggt
    16321 ctgctagatt tttcgacgcg ttgttttgga aaacagcaga agcgacattt cctcccgctt
    16381 gtgtggcaga gttaacactt tctcctaata aaactgcttg gtttaaatgg gtggaaataa
    16441 tttgtttgga tattacttca tcacccgctg caccaagaaa tttatttaat ctggcaacag
    16501 cattagtgat taaatcgtcc agttgagaag aaaaattctt gagaaacttt ggtataaggt
    16561 ctgtgagggt tttacctatt attttgccaa tattctctgc aagttttgct gctgcctgtt
    16621 taccaacagt ggctacgaga acgactgctg caaccaagac aagagcgcct gcgattgccc
    16681 ccagaataga gccaatcatt ttggcttttt tcgagtcgac gcccaagcct tcgagcattt
    16741 ttgtaaatgc atctgaaagg agtttgatta agggttcaat gactgctttc atgatcggat
    16801 tcagggcttg ttccatgaag gaattgccgg tcgctgcttg tactatagca tccgtaacca
    16861 taagagctaa accaacagct gccagtgcta gagatgctcc tccagaaaaa gctgctgcaa
    16921 caacactaac gatagttaaa agtgccccaa gtattttccc aacacaaccc attactctgt
    16981 tgagttcttc tgctttacgt acttcagcag catactcatc agattttctc tccatttcag
    17041 tttttcttga ttcttggaga gactggaata gagccagatc attttttaaa gattcttcat
    17101 tattttttcc aactagttga ataaaggttg ccatcaattg agtaacactg gcaagtccgg
    17161 ttaatgattt ctgctgggtt gatagctgtt cagcagatgc tgtgtttgaa aatgcagaaa
    17221 aagagtctat ttctttttcg agttgcattg atttatctgt aagtttgcta tgaattgaca
    17281 gggttttctg ctcaatcaat gtcctgtctt taactgctgc gtcttttttg atagtgagtt
    17341 gtatttcttc ccgtcttaat tttttatttt ctggtgaatc tgggtcgagt tcggataatc
    17401 ttgtttgaat ttggttaatt ttattttcta ggtcttttat tttagaatct gcgtttttta
    17461 gtttattaat ttgtttttca tagtctctgg ttagtccttc agtttcagat agaagagtat
    17521 taattttatc ggagaattct aggttttttt gctgtcttgc ctgttgctgg gacttccagg
    17581 cagtaatttt atttgttaat gcagttaaag atttttcacc gagtatttga ataaggtttc
    17641 caattaaaag cgttagttgg gaacttgcat ttaatgactt tggtgcttta agttcaggga
    17701 ttaatatatt cgaagttgag tgtgcattag ttgtattaat atttttgtta gcagtaagat
    17761 cagcaattgt aagagaaaat aatttgttag ctgcatcatt tgcagcctgg atagtattgt
    17821 ctccaagctc agtggaagcc aatattttgg caagaggcaa accagtgttt gtggtgctta
    17881 cattatgcat aataattact ccttgatatc ctgaattgcg tctaagtatg attgtgcttt
    17941 tatttttaat ttttcatcat tgctgtgttg aattacgagt tcgaagcact ctttggcttt
    18001 caagggggct ttcaaccgaa gctggcattg tccagtatgg aataccggtg tatagtcatt
    18061 ttttcctaat gcaaaagcga cagcataaag gtctgctgct tgttggaact gttcttttat
    18121 ctgataaata gctgcgagtc ccataatgta gtctacattg taaaagtcgt atatacataa
    18181 aaatctgaag aaaacttcag cttcctctat tcttcctttg ttgtaaaagt cataagcata
    18241 tgaataaatg tcatccatca tatcatcagg aattgcatta atatctttca gtgtagcgcc
    18301 agagttaatt gcatcaatta ctgcagtaga gatgctttca ttttcagtga tatttaaaga
    18361 cataaggtct cctttttgtc tgcattactt taataagtat aaaatttaat ataaacagat
    18421 ttaatttgta ttgctttgac ggtatacagc ctttagaacc tctgcgctta tttctatttg
    18481 taaaactttt gttgattcat taaatatttt atcgtagacg gaactggata ctagatttgt
    18541 aagatccttc atttgtgtgt taaacaaatc catgtcactg ctataacgtt ttaaaatctt
    18601 tgctctgagg ccagatgagg caatctcgtt tagtgctgta tgactgatag atgtttgtgc
    18661 tgatttttca tcaagtttta tatccgggaa ttttttttca atagctgcaa atatgttttt
    18721 tttgttatct gaggtcaaaa caactccatt gtgtatggcc atttcatcta tacttctgtt
    18781 tatcattgaa gagacataag aggttcgctc ttggctcatc caacaaaata gttgattccc
    18841 cgaattacta tcttttattt tgtctatgac gctgtccctg attttattta tattcaccgg
    18901 gcatccaaaa ttcttctgag gaaagcgttg ttttaagtta aaaacagata atattttctt
    18961 tacaagctta ttgtgactta acgaatcaaa tgatgggcga ggaatcgcga attcaacctg
    19021 tggaagtatt ttgtttagaa tttgcatgat accccctata tgttagttca cttctgaagt
    19081 gatgtttgca atggttagtt taatacaaaa taaaaattcg tacaaagatt caatgagttc
    19141 atcaggtgaa agatattttt tgtagtgttt cttggtcaaa acacattgat gagtatcagg
    19201 gagaagacag atagaagaac cataatctct actcaaagag tagttaagga tgagtatgtg
    19261 ttctggatta ataatatttt ctgtaaaaag ttcatgttca ttaagaagtc cggtcaaaaa
    19321 gatgtattca tcattatctg ttatacaaac aggtatttgt tcttcgagca atataaaggc
    19381 ttgattttta tcgttaaaat caagctttgc acctgttatt tcataaagtt tatcatatag
    19441 tttgcgacac atttctatgg ccttctatat attagaatga gagttattca ataaaagctt
    19501 attgacctgt aataagtcgt gaatgtaaag tttggttcca agatctggcg atttaagaga
    19561 attgtaataa tcaatagttt ttattgactt ttcgataatt tcttcttttt tatctgttgc
    19621 tccgattttt aattcgttta atacacgaga catattgctg ggtgctgatt ttactaagta
    19681 tgagtggcaa gcgttgatga ccgcatcaaa gtcttctgaa gatacatttt cagtaggatg
    19741 tttgtaaagt gaaattgata aaggcttgaa tgtttttggg gtgtggataa ggttaatttt
    19801 attgaaactt ttaagatagc tacgtcgtaa ttgagtcaat ctggaaagat caaaatcaga
    19861 ttcaatatac ttcattatct cgttataaga ctgattgaga ctttcaatgc gttgcctaac
    19921 tttatttgca tacgcgtata cattgttagg tgtagcaacc aatttaacgt cagggagtgg
    19981 aaagtatatt tcagaatttc ctgctttaag aacattaagt gccataccag cacagttttc
    20041 agatttactg attaatttat aatttgccaa ttgtctgaaa gcatctgctt tcttttggca
    20101 tataaatttt gacatgtttg tttcatcaag gccaaaaagg ttatagctga ttttaccatc
    20161 ctttgtttta ttatcacctg ataatggaat gtatacttta tcagcactga ccccccaata
    20221 accatagggg tctttttttt gattagctct gggaaaaaat atttttttgt tgttattttg
    20281 atcttgtttt gaatttaata agtttctaac ctcttggcct gcatcaagtc tttcggctgt
    20341 ttggtctgaa atcatattta gtttgtcttg tttataggta tcgacactgt aacctgagcg
    20401 tttttcaaaa aggtagttta tttctgtatc ttttgtaaca ttcccgccgg gataccagct
    20461 gagataggta tgagttggtt cctgtagtaa attgtttttt atactgatac tggtatgccc
    20521 taaatgggtt atgcctctat ttccccagca acgaaacact aaatgtcttt caagattttt
    20581 ggctgtaccg atgccatgaa aactctctgc ggtattcaac attaatttga tgtctttacc
    20641 tgtaaaagaa tgttgaattg aatttttgac tgcttcatag gcggcaaacg cactttctgc
    20701 agatttttcg ctagctaatg tcttgaggaa aagcaataag gatttttgat tcgctagtcg
    20761 ataatttttt agttgttcat ttaatatctg tgaatttatc tttgcattaa tagtgcttaa
    20821 tgttctgaaa aagagatcct ttaggttgaa tttctgtgct accaatatag gtccatgctc
    20881 tgtatcttca acgcgtatag gcccttttgt attgcttgcg tcaatgaaat tgctaatttt
    20941 gagaatcata ctttattaac tctccattac gtggtgattg tggggatgta aaatgtattt
    21001 gatatataat atattcaatt aataaattta gaaacttgag cctgttaaca taatcaaatt
    21061 ttcttttgct gtatataata tgtacctcgt gagcatatgt agtgctggtt tcatcatgaa
    21121 atcccacaag ttaaagtgtc tgatatatca ggctcggagt gttatagaaa aagagagaac
    21181 cctgttgaat aagtatcttt tttgttgtaa aacgaggtac aaaactgcaa tcaatgcccc
    21241 atttatgact gaggataatt aaatgcacat aactaatttg ggattgcatc aggtttcatt
    21301 tcaaagcgga gattcctata aaggcgcaga agaaaccgga aaccaaaaag gtgtaagcgt
    21361 gatttcatat caaagagtta aaaatggaga gagaaataag ggggtcgaag cgcttaatcg
    21421 attatattta cagaaccaaa caagcttaac agggaaaggc cttttgtttg cgcgtgacag
    21481 agctgcagtt ttttacgagg caataaagtt ggcaggtggt gatacgtcaa aaattaaagc
    21541 catgatggaa caattagata cctataaact tggtgaagtt gataaaagaa atattaatga
    21601 gcttaataaa gtaataagtg aagagatagg agcacagcta ggcattaaaa ataaaaagga
    21661 attgcaatcg gaaataaaac aaatatttac taattattta aataataaga attgggaacc
    21721 gatcaacaaa aatattaatt atcatgggaa aaattatggt tttcaattaa cacccgcctc
    21781 tcatatgaag atagggaata aaaatatatt tgtcaaagag tataatggaa aaggaatttg
    21841 ttgtgcttct acgagagaga gtgagcatat tgcgaatatg tggctttcaa aagtggtgga
    21901 tgacgagggg aaggaaattt tttcgggtat cagacatgga gttatatcag cctatggatt
    21961 gaaaaaaaac tcatctgaaa gagctgttgc agctcgtaat aaagctgagg agttagcaag
    22021 cgcagcatta tatagcagac aagaattatt atcacaggct ttgtctggta aaacagtaga
    22081 tttaaagatt gtttcgactt ctcttctgac gccgaccagt ttaactgggg gagaggagag
    22141 tatgttaaaa gatcaggtaa aggcattaaa agggttaaac tctaaaaggg gggaaccaac
    22201 gaaattatta attcggaata gtgatggtct tctgcaagaa gtaaaggtta atctaaaagt
    22261 ggtgacattt aactttggtg taaatgaatt agcgctaaaa atgggcttag gctggaggaa
    22321 tgttgacaag cttaatggtg aatcaatatg ttctttgttg ggggataatt tcctcaaaaa
    22381 tggtgtgatt ggaggttggg ctgcagaagc tatagaaaaa aatccaccat gtaagaatga
    22441 tgtgatatat ctggctaacc agataaaaga gattgtaaac aagaagttac aaaaaaatga
    22501 taatggagag ccgtataaat tgtcacaaag aatggctcta ttggcttata ctataggtgc
    22561 tgtaccttgc tggaattgta agagtgggaa ggacagaaca ggtatgcagg atgctgaaat
    22621 taaaagagaa ataataagaa aacatgaaac agggcagttt tctcaattaa atagtaaatt
    22681 atcctcagaa gagaaaagat tattttctac tattctaatg aatagtggta atatggaaat
    22741 ccaagagatg aatactggtg tgcctggaaa taaagttatg aaaaaattac cgctatcttc
    22801 gttagagctg tcttatgctg aaagaatagg ggaccccaaa atatggaata tggtgaaagg
    22861 gtattcgtca tttgtataag aggaatatat ggaagattta gcagatgtta tttgccgagc
    22921 cttgggtatc ccttcaattg ataccgatga tcaagcaatc atgcttgatg atgatgtgtt
    22981 aatatatatt gaaaaagaag gagattcaat aaatttatta tgcccttttt gtgcattgcc
    23041 tgaaaatata aatgatctta tatatgcgtt gagcctaaat tactcagaaa agatatgttt
    23101 agctactgat gatgaaggtg gaagtctaat tgcgcgatta gatcttaccg ggataaatga
    23161 attcgaggat atatatgtta atacagaata ttatatttcg cgtgtgcgtt ggctgaagga
    23221 tgaatttgcg cgaagaatga aggggtatta atgtcccgtt tcgtatttat ttttctgtgt
    23281 tttatcccat atttagggag agctgattgt tgggataagg ctggtgaaag gtacaacatt
    23341 ccatcgagtt tgttaaaagc gattgcggaa aaagaatccg gatttaataa atttgcagtc
    23401 aatgttaata acaatggaag taaagattat ggtataatgc aaataaatga ctttcattct
    23461 aaaagactta gagaaatggg atatactgag gaaatgctaa ttagtcatcc atgtctttct
    23521 gtacattatg cagcaaagtt attaaatgag tttatgctga tgtatggaag agggtgggag
    23581 gctgttggtg cctataatgc aggaacatct ccgaaaaaga aaaaagaaag attaaagtac
    23641 gcagaggata tctataaacg ctatttgcgg atagcagcag agagcaagca gaataatcga
    23701 aggatataag aggatttatg tctgaggcaa agaactcaaa tcttgcacca ttcaggttat
    23761 tagtgaaact cacaaacggt gtcggggatg agtttccgtt atattatggg aataacttaa
    23821 ttgttctcgg acggacgata gaaacacttg agtttggaaa cgataatttc ccagaaaata
    23881 ttattccagt aacagatagt aaatcggatg gtataattta tttggccata agtaaagata
    23941 atatctgtca atttagtgat gaaaaaggtg aacaaattga tatcaattca caatttaact
    24001 catttgaata tgacggagtt tcttttcaac ttaaaaatat gatggaggat aaatcgagag
    24061 ttcatatact aaacggaatg tataataaac cctcggtgtt ttttttcttt gctgttattg
    24121 ttgtgttaat tataattttt tccctctctt taaagaaaga tgaagtaaaa gaaattgctg
    24181 aaattataga tgataagaga tatggaatag tcaacacaga acagtgcaat tatattcttg
    24241 ccgaaacaca aaatgatgcg gtatgggcat ctgtagcctt aaataaaacc ggatttacca
    24301 aatgcagata tattctggtg tccaacaaag aaataaatag aattcaacaa tatatcaatc
    24361 aacgattccc atatatcaat ttgtatgtgt tgaatttagt gagtgataaa gcggaattac
    24421 tggtattttt aagtaaagaa agaaatagtt caaaagatac cgaacttgag aaattgaaaa
    24481 atgctctgat agttgaattt ccgtatatca aaaatattaa attcaactat cttagcgatc
    24541 ataatgcaag ggaggatgct aaaggtattt tcacaaaggt aaatgtccag tataaagaga
    24601 tttgtgaaac taataaagtt acatattctg tcagagaaga actgacagat gaaaagcttg
    24661 agctcattaa tagactgatt tctgattata aaaatgtata tggagatcag tatattgagt
    24721 tttctgtact tttgatagat gatgatttta aaggtaaatc atatcttaac agcaaagaca
    24781 gttatgtaat gttgaatgat aaacactggt tttttttaga taaaaataag tgaggataaa
    24841 atgagtgtta cagtaccgaa taaagattgg actctgagtt cattatctga aacttttgat
    24901 gatggaactc aaacattaca aaggcaacta acatcggcac taaatgcatt agctgaaaat
    24961 ccttcgaatc cacagttgct ggctgaatac caaagtaaat tatctgaata tacattatat
    25021 aggaacgcgc aatctaatac tgtgaaagtg attaaggatg ttgatgctgc aattattcaa
    25081 aacttcagat aatagggagc attcatgaat tacatttatc cagtcaatca ggttgatatt
    25141 atcaaagcca gtgattttca atctcaagag atatcaagcc tggaagacgt cgtgtcggct
    25201 aaatatagtg atattaagat ggatacagat attcaagtat cacaaataat ggagatggta
    25261 agcaatccag aatcattaaa cccagaatct ttggccaagt tacagacgac gctctcaaat
    25321 tattcaatag gagtatcatt agctggcacg ttagcaagaa aaacagtttc ggctgttgaa
    25381 actttattaa agtcttaatt tatatgatta ggtataaagg ttttatttta ttcttgttgc
    25441 tgatgttgat tggatgtgag caacgtgaag agttaatttc taatttatct caaagacagg
    25501 caaatgaaat aatatctgtg ctagaacgcc ataatattac tgctagaaaa gttgatggag
    25561 gtaaacaggg gatctcggta caagtcgaaa aggggacatt tgcatcggca gttgatttga
    25621 tgcgcatgta cgatttgcca aatccggaga gagttgatat ctcacaaatg tttcctacag
    25681 attcattagt gtcttctcca agagctgaaa aggcccgttt atatagtgct attgagcaac
    25741 ggctggaaca gtctttagtt tctattggtg gtgttatttc ggcaaaaata catgttagct
    25801 atgatcttga agaaaaaaat atatcttcaa aaccgatgca tatatcagta atcgctatat
    25861 atgactcacc gaaagagtct gaactattag ttagtaatat taagcgattt ttgaaaaaca
    25921 ccttttctga tgttaagtat gaaaatatat ctgtcatatt aactccgaaa gaagaatatg
    25981 tttatacaaa tgtacaacct gttaaggaaa ttaaatcgga atttttaaca aatgaagtaa
    26041 tatatgtatt tctcgggatg gctgtactag ttgtcattct tttggtatgg gcattcaaaa
    26101 cagggtggtt caagagaaac aaaatatgat aagaatggat ggaatttata aaaaatatct
    26161 ttcaataatt tttgatccag cgttctatat aaatagaaat cggttgaatt tgccttctga
    26221 actgttagaa aatggcgtaa tcagaagtga gattaataat ctcataatta ataaatatga
    26281 tctaaattgc gatattgaac ctttaagcgg ggtaaccgct atgtttgttg ccaactggaa
    26341 tttacttcca gctgttgctt attttatcgg tagtcaagag tctcggttaa ttaatcatag
    26401 tgagatggtt attagttatt atgggggcaa aatcagtaag caaggggagg ccgctattcg
    26461 aagtggtttt tggcatctta ttgcgtggaa ggaaaatata tctgttggta tatatgaaag
    26521 aataaactta ttatttaatc caattgcttt ggagggaaat tatacgcctg tagaaagaaa
    26581 tttgtcccga ttaaatgaag gtatgcaata tgcaaaaagg cactttaccg gtatccagac
    26641 atcatgccta tgatggtgtt gttataaaga gaattgaaaa ggaattatgt aaaaccataa
    26701 aagatagaga cactgagagt aagaagaaag caatttgtat tataaaggat gctacgaaaa
    26761 aagctgaatc actgcgtata gatgctgtat gcgatggtta tcaaattggt atacagactg
    26821 cttttgagca tattattgac tatatttgtg aatggaagtt aaagcaaaat gaaaacagaa
    26881 gaaatattga ggactatata actagtttgc tttcagaaaa tttacatgat gagaggatca
    26941 ttagcacttt attggagcag tggcttagtt cgttgcgtaa tacagtaaca gaattaaaag
    27001 tggttttgcc caagtgtaat ttagcactga ggaaaaagtt agaacttgat ctccataaat
    27061 atcgctcaga tgtcaagatt attttaaaat attctgaagg gaataattat atattctgta
    27121 gtggtaatca agtagtggag tttagtcctc aggatgtaat atcaggtgtt aaaatagaac
    27181 ttgcggaaaa attaacaaaa aatgataaaa aatatttcaa agagttagca catgagaaac
    27241 tgagacaaat tgcagaagac ttgttaaaag agaatcctgt taatgattaa tcaaataaat
    27301 gcaagcaatg ctctgcagca aagattaaat agtgaagaat ttgttaattt aaatgagaga
    27361 ttatcatctt cgcaatcatt tgatgaggat ataatctatg aaataatgca atatttctca
    27421 cagagtgaat taaattccat agataatgat gaactgcaca ataagattga acaattattc
    27481 aattcacgtt ttccttatct tacagctgca caaaaaagtt cacttcttaa taaactcata
    27541 gatgcaaatc aatatgtcga tttgcatgag ggattttatg catcattgtc catatataac
    27601 aatattgatt tctatattaa gactacaacc ttcgattcat taattagtgt ctttgaagca
    27661 gggagagagg cagatgattc gacatggtag taataagttg aaaatattta ttttaagtat
    27721 attgctatta acactgagtg ggtgtgcttt aaagtcatca tctaattctg aaaaagaatg
    27781 gcatattgtt cctgtaagta aggattattt ttctattcca aatgatttat tatggtcgtt
    27841 taatacaacc aataaaagta taaatgttta ctctaaatgt attagtggta aggcggttta
    27901 tagttttaat gcaggtaaat tcatgggcaa ctttaatgtt aaggaagtag atggatgctt
    27961 catggatgca caaaagatag ctatagataa actattttct atgctgaaag acggggttgt
    28021 tttaaaaggt aataagataa atgataccat ccttatagag aaggatgggg aagttaaatt
    28081 aaaattaatt cgagggatat aattgtattg tgagtaaata taaaggtcta aatacaagta
    28141 atatgtttta catttactct agtggacatg aaccagttaa cgttgagctt gtaaaagata
    28201 aagaacgtaa cataattgag ctggctccag catggaaggg tttttttttg tccgaaatca
    28261 aaatataaaa ttcagtgata atgtgaacta tcattatcgc tttaacatta atagttgtgc
    28321 aaaatttctt gctttttggg actatttcag tggtgctcta gtagagcata gccatgctga
    28381 aaaatgtatt catttctatc atgagaatga tcttcgggat agttgtaata ccgaatcgat
    28441 gcttgataag ttaatgttaa gattcatctt ttcatctgac cagaatgtaa gtaatgcact
    28501 ggctatgata cgaatgactg agtcatatca tttggttctt tatcttctga gaactattga
    28561 gaaagaaaag gaggtaagaa taaagagtct gacagagcat tatggtgtgt cggaggctta
    28621 ttttagatct ttatgtagaa aagctttagg ggcaaaagtc aaagaacaac tgaacacttg
    28681 gcggttagta aatggtttat tagatgtatt tttgcacaat caaacaatca cttctgctgc
    28741 catgaataat gggtatgcat caacatccca tttttcaaat gagataaaaa cacgactagg
    28801 cttttctgca agagaattat cgaatattac ttttttagtg aaaaaaataa atgaaaaaat
    28861 ttaatattaa atctttgact ctcttgattg tattgttacc attgatagtt aatgctaata
    28921 atattgactc tcatttatta gaacaaaatg acatagcgaa atatgttgct caaagtgata
    28981 cggtaggatc tttttttgaa cgtttttctg cgttattaaa ttatcctatt gttgttagca
    29041 aacaagctgc aaaaaagaga atatctgggg agtttgattt atctaatcca gaagaaatgc
    29101 ttgaaaaaat gacattactt gtgggactca tatggtataa agatggaaat gcattataca
    29161 tatatgactc tggagaatta ataagcaaag ttattttgct ggagaatata tcacttaatt
    29221 atcttattca gtatctgaag gatgctaacc tttatgatca cagatatcct ataagaggaa
    29281 acattagtga taaaacattc tatatatctg gtcctccggc attggttgaa ctggtagcta
    29341 atacagcaac tttgcttgat aagcaggttt cttctattgg gacagataaa gttaattttg
    29401 gggttataaa attaaaaaat acatttgtta gtgacagaac ttataatatg agaggggagg
    29461 atattgtcat cccaggggtg gctactgttg tagaacgttt attaaataat ggtaaggctc
    29521 tgagtaacag acaagccaaa aatgatccga tgccaccctt taatattaca cagaaagtat
    29581 ctgaggatag taatgacttt tcatttagtt cagttaccaa tagttctata ttagaggatg
    29641 tatcacttat tgcatatcca gaaaccaatt ctatattagt caaaggtaat gatcagcaaa
    29701 tacagattat tcgcgatatt atcactcagt tagatgtagc caaacgacat atagaattat
    29761 cattatggat aatcgatatt gataaatctg aattaaataa ccttggcgtt aattggcaag
    29821 gaacggcttc atttggtgat tcgtttggtg catcatttaa tatgagctca tcagcatcga
    29881 taagcacttt ggacggcaat aagtttattg cttcagttat ggcattaaat cagaaaaaga
    29941 aagcaaatgt agtttcaagg ccggtgattt tgacacaaga gaatattccg gctatatttg
    30001 ataataacag gactttttat gtgtcattag ttggtgagcg caattcttcg ttggagcatg
    30061 ttacgtatgg aacattgata aatgttatac ctcgcttttc atctcgggga caaattgaga
    30121 tgtctttaac gatagaggat ggaacaggaa atagtcagtc aaattacaat tataataatg
    30181 aaaatacatc tgtccttcca gaagttggaa ggaccaaaat cagtacaata gcgagagttc
    30241 cacaaggcaa aagtttgttg ataggtggtt atacgcatga aacgaactct aacgaaatag
    30301 tatctattcc ttttctctcc tctattcctg taatcggtaa tgtgttcaag tataaaacaa
    30361 gtaatatcag taatattgta agggtttttc tgattcaacc ccgtgagata aaggagtcaa
    30421 gttattataa tactgcagaa tataagagcc tcatatctga aagagaaata caaaagacta
    30481 cacaaataat cccatctgaa actactttgc tggaagacga aaaatcattg gtttcatact
    30541 taaattacta actataaagt aggtgatgta tgcttgatgt taaaaataca ggagttttta
    30601 gctctgcatt cattgataag ttgaatgcaa tgacaaattc agatgatgga gatgagactg
    30661 ctgatgcaga gcttgattct ggcttggcta atagcaagta tattgactca tctgatgaga
    30721 tggcttccgc tctttcgtca tttataaaca gaagagacct tgagaaactg aaaggaacaa
    30781 atagtgatag tcaggaacgt attttagatg gggaagaaga tgaaattaat cacaagattt
    30841 ttgatttaaa gagaacttta aaagataacc ttcctctaga tcaggatttt atagacagac
    30901 taaagagata ttttaaagat ccaagtgatc aagtcttagc attaagggaa cttttgaatg
    30961 aaaaagatct tactgctgaa caagtcgaat cattaactaa aattattaat gagataatat
    31021 caggtagtga aaaaagtgtt aatgctggaa taaattcagc tatacaggct aaattatttg
    31081 gcaacaaaat gaaacttgaa ccacagcttt tgcgtgcatg ttatcgtggt tttatcatgg
    31141 ggaacatatc aacaacagat cagtatatag aatggcttgg taattttggt tttaatcaca
    31201 gacatacaat tgtgaatttt gtagagcagt cactgattgt agacatggat tctgagaaac
    31261 cgagctgtaa tgcttatgag tttggttttg tgttatctaa attaattgca attaagatga
    31321 ttagaacttc agatgtaatt tttatgaaga aactggaatc ctcaagcttg ctaaaagatg
    31381 gcagtttaag tgcagagcag ctattgctaa ctttattata tatttttcaa tatccaagtg
    31441 aaagtgagca aattcttact tctgttatag acgtatcacg agccagtcat gaggattctg
    31501 tagtgtatca aacatatcta tcttctgtta atgaaagtcc tcatgatata tttaaaagtg
    31561 aaagtgaaag agaaattgcg atcaatattc tacgagagct tgtcacaagt gcatacaaga
    31621 aagagctttc tagataacag gagatgaaag tgatccagtc ttttcttaag caagtaagta
    31681 ctaagcctga attaattata ttagtgctta tggttatgat cattgctatg ttgatcatac
    31741 cattacctac ataccttgtt gattttttaa tagggcttaa tattgtactt gctattctcg
    31801 tttttatggg atcattttat attgaaagaa tattgagttt ttctacattc ccttcggttt
    31861 tgttgataac gacattattt cgtctcgctt tatcaataag tactagtcga ctaattttag
    31921 ttgatgcgga tgcgggtaaa attattacta catttggcca gtttgtcatt ggtgatagtc
    31981 tggctgtagg ttttgttatt ttttcaatag taactgttgt gcagttcatt gttataacaa
    32041 aaggatctga aagggttgcg gaggtagctg ctcgcttttc tcttgacggt atgccgggga
    32101 aacaaatgag cattgatgcg gatttaaagg ctggaattat tgatgccgca ggagctaaag
    32161 aaagacgcag tattctggaa cgtgagagtc aattgtatgg ttcatttgat ggagcaatga
    32221 agttcattaa aggtgatgca attgctggca tcattattat ttttgtcaat ttaataggag
    32281 gtatttctgt tggtatgagt caacatggaa tgtctctatc tggtgcatta tctacttata
    32341 ccatactaac tattggtgac ggattggtct ctcagattcc tgctctgtta atttctataa
    32401 gtgcaggatt tatcgttaca agagttaatg gtgatagcga taatatggga cgtaacataa
    32461 tgtcccagat atttgggaat ccttttgttc tcattgttac atcagctctt gccttggcga
    32521 tagggatgtt gccaggtttt ccgttttttg tttttttcct gatagcagtt actttgacgg
    32581 ctttattcta ttataaaaag gtcgtagaaa aagaaaaaag tctgtctgag tctgattcta
    32641 gtggctatac tggtacattt gatattgata atagcaatga ctcatctttg gcaatgatag
    32701 aaaatctgga tgctattagt tcagaaaccg ttcctttaat tttattattt gccgaaaata
    32761 agataagtgc aaatgatatg gaaggtctta ttgaaaggat aagaagtcag ttctttattg
    32821 attatggtgt caggcttcca actattttat atagaacaag caatgagctt aaggtcgatg
    32881 atattgtttt gttaataaat gaggtgcgtg ccgatagttt taatatatac tttgataaag
    32941 tgtgtattac agatgaaaat ggagatatag atgctctagg tattcctgtt gtttcaactt
    33001 catataatga acgtgttatt tcttgggtag acgtttcata tacagaaaat ctaactaata
    33061 ttgatgctaa aattaaaagt gctcaagatg aattttatca ccagttgtca caagctttat
    33121 taaacaacat aaatgagatt tttggtatac aagaaacaaa aaatatgtta gatcagtttg
    33181 aaaatcggta tcctgatcta ttaaaggaag tcttccgaca tgtgactata cagagaattt
    33241 ctgaggtatt acaaagattg cttggagaaa atatttctgt tcgcaattta aaacttatta
    33301 tggagtcttt ggcgctttgg gctcccagag aaaaagatgt cataacatta gttgaacatg
    33361 tccgtgcatc actttctagg tatatttgta gtaaaatagc tgtttctggt gagattaaag
    33421 ttgtgatgct ttccggatat attgaggatg caataagaaa agggataagg caaacctctg
    33481 gtggctcttt cttgaatatg gatatagagg tttcggatga ggtaatggaa actttagcac
    33541 atgctttgag agaattgaga aatgcaaaaa aaaatttcgt tcttttggta tcagtagata
    33601 tacgtaggtt tgttaaaaga cttatagata acagatttaa gagtatactc gttatatcgt
    33661 atgctgagat tgatgaagca tataccatta atgtattaaa gactatttag tgaggtttaa
    33721 atatgagtaa cattaattta gttcaattag ttagagatag tcttttcacg attggttgtc
    33781 ctccatcaat tattacagat ttagacagcc attcagcgat taccatttct ttggatagta
    33841 tgcctgctat taatatagct cttgtcaatg agcaggttat gttatgggct aatttcgatg
    33901 caccaagtga tgtaaaactt cagtcatctg cttataacat attaaattta atgttaatga
    33961 actttagtta tagcattaat gagctggtag agcttcatcg ttctgatgag tacttacagt
    34021 taagagttgt tattaaagat gactacgttc acgatgggat tgtttttgca gagattctgc
    34081 atgagtttta tcagaggatg gaaatcttaa atgaggtctt ataatcaatg agctatataa
    34141 aattgctcac tcaattatct tttcctaata gaatctcggg gccaatcttg gaaacaagtc
    34201 ttagtgatgt ttcgattggt gagatttgta acattcaggc tggaattgaa agtaatgaaa
    34261 ttattgcaag agctcaggtt gtaggatttc atgatgaaaa aacaatatta agcttgattg
    34321 gaaattctcg tggactttca cggcaaacgt tgattaagcc cactgcccag tttcttcata
    34381 cgcaagtcgg ccgtggatta ttgggagcag tagtcaatcc tttaggggag gttactgata
    34441 agtttgctgt tacggataac agtgaaattc tttatcgacc tgtagataat gctcctccgc
    34501 tatatagtga aagggctgca attgagaagc cttttttaac aggtgttaag gttattgatt
    34561 ctttactcac gtgtggtgaa ggacagcgaa tggggatttt tgcgtcagct ggttgtggca
    34621 aaacttttct catgaatatg ctcattgaac atagtagtgc tgatatatat gttattgggt
    34681 taattggtga gcgaggtcga gaggttacag aaacggttga ttatttgaaa aactctgaga
    34741 aaaaaagcag gtgtgtttta gtatatgcaa cttcggatta ctcttcggtt gatcgttgta
    34801 atgctgcata tatagccact gctatagccg aattttttag gactgaagga cataaagtag
    34861 cgctttttat tgattcatta acaaggtatg ccagagcatt acgtgatgtg gccttagccg
    34921 ctggagaatc acctgccaga agaggctatc cggtttcggt ttttgatagc ttacccagac
    34981 ttcttgaaag gccaggaaag ttaaaggcag gtggctctat tactgcattt tacactgttc
    35041 ttttggagga tgatgatttt gctgatccat tagctgaaga ggtaagatcc attttagatg
    35101 gacatatata tttgagcaga aatctagccc aaaaaggaca atttcctgca attgattcct
    35161 taaaaagtat aagcagggta tttacacagg ttgttgatga aaaacatcgt attatggccg
    35221 ctgcatttcg ggagctactt tctgaaatag aagagctaag gacaattatt gactttggtg
    35281 aatacaaacc gggggagaat gcctctcagg ataaaatcta caacaaaata tctgttgttg
    35341 agagttttct gaagcaagat tatcgactcg gttttactta tgagcagaca atggagctta
    35401 ttggtgaaac aattagataa ggttttaaaa atcaaagata aatatcaacg gtctgttaaa
    35461 ttaattgaag cacacatatt aacactaaaa aaaaaactct ttgtatcgag atgtggaggc
    35521 attagataaa aggattatat acttcctgca actggagaat gacttggaac ctataggcgc
    35581 tcagagtgtt agtcagcttt tcaatacaag acgtaagatc gctatagtaa aaaagcatat
    35641 tatccaatat cagtctgaac gaattcttct aaagggaaga attgaagaaa ttcaaaaaga
    35701 tattgatgag gcaaatgctt ctaaaagaaa actgcttcat aaagagagta aaatatgtaa
    35761 acggattggc ttgattaaaa gaaataactt tgccaaacag ttgatacttg atgagttatc
    35821 acaagaggat atgaagtatg gcattagata atataaacct aaattttagt agtgacaaac
    35881 agatagaaaa atgtgagaaa ctatcttcaa tagataatat tgatagtctc gttttgaaga
    35941 agaagaggaa ggttgaaatt cctgagtact ctttaattgc atctaactat tttactattg
    36001 ataagcactt tgaacataag catgataaag gagaaattta tagtggcatt aaaaatgcgt
    36061 tcgaacttag aaacgaacga gcgacatatt ctgatattcc agaatcaatg gccattaaag
    36121 aaaatatttt gataccagat caagatatca aagcaaggga aaaaataaat atcggcgata
    36181 tgagggggat cttttcatat aataagagtg gaaatgcaga caagaacttc gaaagaagtc
    36241 atacttcttc tgtaaaccct gataatctgc tagaatctga taatagaaat ggtcaaattg
    36301 gtttaaaaaa tcatagcttg tctattgata agaatattgc tgacatcatt tctttactaa
    36361 atggaagtgt tgctaaatca tttgagctgc ctgtaatgaa taaaaatact gcagacataa
    36421 ccccatccat gtcattgcaa gaaaaatcaa tagttgaaaa tgataaaaat gtttttcaaa
    36481 aaaatagtga aatgacttac cactttaaac agtggggggc tggacattct gttagtattt
    36541 cagtggagtc tggttctttt gttctaaaac cgtcagatca atttgtagga aataaacttg
    36601 acttaatttt gaaacaagat gctgagggta attacagatt tgatagcagt caacataata
    36661 aggggaataa aaataatagt acaggatata atgaacagag tgaagaagaa tgctaagaat
    36721 taaacatttt gacgctaacg aaaaactaca gattttatat gcaaagcaac tctgcgagcg
    36781 tttttcgatt cagacattca aaaataaatt tacaggcagt gaaagtttag tcactcttat
    36841 ttccttgtgt ggggattggg taattcgtat tgatacatta tcttttttga aaaaaaaata
    36901 cgaggtattt tcaggatttt ctacacaaga atctttactg catttatcaa aatgtgtctt
    36961 tatagagtca tcatctgtat tttcgattcc agaactgtct gataagatta ctttccggat
    37021 cacgaatgaa atccagtatg caactactgg gagtcattta tgctgttttt cctcttcttt
    37081 aggtattatt tattttgaca agatgccggt attacgtaat caagtttctc ttgacttatt
    37141 gcatcatctt ttagagtttt gcttaggttc atctaatgta aggctggcta ctttaaaaag
    37201 aattcgtact ggtgatataa tcatagttca gaaactttat aatttattat tgtgtaatca
    37261 agttattatt ggggattata ttgtgaatga taataatgag gcaaaaatta atctgtcaga
    37321 aagtaatggt gagtcagatc acacagaagt ttctttggca ttattcaatt atgatgatat
    37381 caatgtaaaa gtggacttta tccttttaga aaaaaagatg acaatcaatg aactaaaaat
    37441 gtatgtagaa aacgaattat tcaagtttcc cgatgacata gttaaacatg taaatattaa
    37501 agtaaatggt tctttggttg ggcatgggga acttgtttct attgaggatg gttatggtat
    37561 cgagattagt tcttggatgg taaaggagta atctcatgct gagtgatatg tccctcatcg
    37621 ctacactttc tttttttacg ctattaccat ttttagttgc tgctggtact tgttatataa
    37681 agttttctat tgtttttgta atggtacgaa atgcacttgg tttgcagcag gttccatcaa
    37741 atatgactct caatggtatt gcattgatta tggctttgtt cgtgatgaaa cccattattg
    37801 aagctggtta tgaaaattat ctaaatggcc cgcaaaaatt tgatacaata tcagatattg
    37861 tccgtttttc tgattctggc ttgattgaat acaagcaata cttgaaaaag catacagatc
    37921 ttgagttggc acgttttttc caaaggtctg aagaagaaaa tgctgattta aagagtgcag
    37981 agaataatga ttattcattg ttttccctct tgcctgcata tgcgctaagt gaaattaaag
    38041 atgcgttcaa aataggtttt tatttatatt tgccatttat tgttgttgat cttgttattt
    38101 caagcatttt acttgcactt ggtatgatga tgatgagtcc aatcacaata tcagtaccaa
    38161 taaaacttgt attatttgtt gcgcttgatg ggtgggggat cctgtctaag gccttgattg
    38221 aacaatatat caatgttcct gcttagatga tggaggtaat gtgtctgata tagtttatat
    38281 gggtaataag gctctttatt taatccttat cttttcctta tggccagtag gtatagctac
    38341 ggttattgga ttaactattg gtttattaca gacagtgact caacttcaag agcagacact
    38401 tccttttggt ataaagctta taggtgtctc aatatctttg ctacttcttt ctggatggta
    38461 tggtgaggtt ttattgtctt tttgtcatga aataatgttt ttaattaaga gtggggtttg
    38521 atggacattt caagctggtt cgaaagtatt catgtgtttt taatactcct gaacggcgtt
    38581 ttttttagat tggctccatt atttttcttt cttccatttt taaataacgg tataatttct
    38641 ccatctatta gaatacctgt gatttttctt gttgcatcag gattaattac ttctggtaag
    38701 gtagacatag gttcttctgt ttttgaacat gtttatttcc ttatgttcaa ggaaataatt
    38761 gttggcctcc ttctctcttt ttgcttgtct cttccctttt ggatatttca tgctgttggt
    38821 agcattattg acaaccagcg tggggcaacg cttagtagtt caattgatcc tgccaatggt
    38881 gttgatacgt ctgagttggc aaaatttttc aatctttttt ctgcagttgt atttctatac
    38941 agtggtggaa tggtctttat tttagaatcc atacaattgt cttataatat atgcccgtta
    39001 ttttctcaat gttctttccg tgtctcaaat atcttaacat ttctgacttt attggcaagt
    39061 caggctgtta ttttagccag tcctgttatg atagtattgt tactatcaga agtattactt
    39121 ggtgtattat cgagatttgc tccgcagatg aatgcttttt ccgtatcatt aactattaaa
    39181 agtttacttg caatatttat tattttcatc tgttcttcta ctatttactt ttctaaagtt
    39241 caatttttcc tcggtgaaca taaatttttc acaaatctat ttgttagata aaatattatg
    39301 gcaaataaaa cagaaaagcc gacacctaaa aaactaaagg atgccgcaaa aaaaggacag
    39361 tcatttaaat ttaaggattt aacgacagtt gttattattc tggtagggac atttactata
    39421 atatcattct tttccttaag tgatgtaatg ctcttataca gatatgtaat aattaatgac
    39481 ttcgaaatta atgagggtaa atactttttt gcagtggtta ttgtcttttt taagataatt
    39541 ggcttcccac tttttttctg tgttctttcg gctgtgttgc caacattggt tcaaacaaag
    39601 tttgttcttg cgactaaagc tatcaagatt gatttttcag tattaaaccc tgttaaaggg
    39661 ttaaaaaaaa tatttagtat aaagacaata aaagaatttt tcaaaagcat tctgcttctt
    39721 attattctag cattaacaac ctatttcttt tggattaatg accgaaaaat aattttttct
    39781 caggtgtttt ctagtgttga tggcttatat cttatttggg gggggctgtt taaggatata
    39841 atattatttt tcttagcatt ttctattttt gttattattc ttgactttgt gattgagttc
    39901 attttataca tgaaagatat gatgatggat aaacaggaga taaaaagaga atatatagag
    39961 caagagggac actttgagac aaagtcgaga aggcgtgagt tgcatatcga gattctttca
    40021 gagcagacta aatctgatat acgtaattca aaattagtgg taatgaaccc gactcatatt
    40081 gcaattggta tttattttaa tccagaaata gcgcctgcac cttttatttc tctcattgaa
    40141 actaaccagt gtgccttggc tgtcagaaaa tatgcaaatg aagttggtat accaactgtg
    40201 cgtgatgtga aattagctag aaaactatat aaaacacata caaaatatag ttttgttgat
    40261 tttgaacact tggatgaagt cctacgtctt attgtttggc ttgagcaggt tgaaaacact
    40321 cattaataag taaaggagat gtgttatatg ggagttaatt tctgtaataa aataggtatt
    40381 gatcagtctg aatttgaaat agaatcttcc atcattaact ccattgctaa tgaggtattg
    40441 aacccaatat ctttccttag caacaaggat ataataaatg ttttactcag aaagatttca
    40501 tctgaatgtg acctggttag aaaagacatt tatcgttgtg ctcttgagtt ggtcgttgaa
    40561 aaaacacctg atgatttata atcattcata ataactcttt tgctgatata aatatttttg
    40621 ttgaagatat ttatgtagtc acaggatcaa ttgtagaaaa ttgttatgtt tttgttagga
    40681 actgaactaa ataatatatg ataagacagc aaaaacgact gaccataatc cttcttttat
    40741 taggagttga taagagagac tattcatcct gtaatgttaa aactctgtta tatagtattc
    40801 gcgattatgc aaagtctgta aatgatcatg agatactaac cgagagtaat cgtttattat
    40861 ctcattgcat ttcagatagt aacggagctt tctttaaaag tagtaaatac gttcccctta
    40921 agtacttacg taaaaggaga atagcacgaa agataccaaa tgattagcac tttgctagta
    40981 agcttgctgg taaactatat tgaccgttgg gtttgttttg agactgtaat ttaaattgtg
    41041 taattgcctg tttttgatat gtttactcca acaacggaga caggtaaatt atggacgaaa
    41101 agaagcttaa agcccttgcg gctgaactgg ctaaaggcct caaaactgag gccgacctca
    41161 atcagttttc ccgtatgctg acgaaatatc ccggctctta aaacgatagt ggctcaggct
    41221 ttcatttttc agcgttcccc agaagatttc catcgga
//
LOCUS       DADMHC010000008        40657 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.008, whole genome shotgun sequence.
ACCESSION   DADMHC010000008 DADMHC010000000
VERSION     DADMHC010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 40657)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40657)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40657
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.008"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(13..870)
                     /gene="murI"
                     /locus_tag="JNZ57_000347"
     CDS             complement(13..870)
                     /gene="murI"
                     /locus_tag="JNZ57_000347"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312925.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HAY8826688.1"
                     /translation="MATKLQDGNTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLL
                     PDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYPLALAVVACNTASTVSLPA
                     LREKFDFPVVGVVPAIKPAARLTANSIVGLLATRGTVKRSYTHELIARFANECQIEML
                     GSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPPDTVVLGCTHFPLLQEELLQVL
                     PEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTPEAEQLLPVLQRYGFE
                     TLEKLAVLG"
     gene            complement(815..2663)
                     /gene="btuB"
                     /locus_tag="JNZ57_000348"
                     /pseudo
     CDS             complement(815..2663)
                     /gene="btuB"
                     /locus_tag="JNZ57_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418401.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent vitamin B12 receptor BtuB"
     regulatory      complement(2717..2907)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            3021..4121
                     /gene="trmA"
                     /locus_tag="JNZ57_000349"
     CDS             3021..4121
                     /gene="trmA"
                     /locus_tag="JNZ57_000349"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HAY8826689.1"
                     /translation="MTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHY
                     RMRAEFRIWHDGDDLYHIIFDQQTKSRIRVDSFPAASELINQLMTAMIAGVRNNPVLR
                     HKLFQIDYLTTLSNQAVVSLLYHKKLDDEWRQEAEALRDALRAQNLNVHLIGRATKTK
                     IELDQDYIDERLPVAGKEMIYRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELY
                     CGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNG
                     VREFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQAYPCILYISCNPETLCKNLE
                     TLSQTHKVERLALFDQFPYTHHMECGVLLTAK"
     gene            complement(4161..4520)
                     /locus_tag="JNZ57_000350"
     CDS             complement(4161..4520)
                     /locus_tag="JNZ57_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YijD family membrane protein"
                     /protein_id="HAY8826690.1"
                     /translation="MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLV
                     LTVYCLHQRYLNRTMPVGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIM
                     VFWIGAKMRNRKQEVAE"
     gene            complement(4520..5170)
                     /gene="fabR"
                     /locus_tag="JNZ57_000351"
     CDS             complement(4520..5170)
                     /gene="fabR"
                     /locus_tag="JNZ57_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002460670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor FabR"
                     /protein_id="HAY8826691.1"
                     /translation="MMGIRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREAGI
                     APTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGN
                     NPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVT
                     IVFSAGAEALDVGVEQRRQLEERLVLQLRMISKGAYYWYRREQEKTAIIPGNVKDE"
     gene            5491..6891
                     /gene="sthA"
                     /locus_tag="JNZ57_000352"
     CDS             5491..6891
                     /gene="sthA"
                     /locus_tag="JNZ57_000352"
                     /EC_number="1.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418397.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Si-specific NAD(P)(+) transhydrogenase"
                     /protein_id="HAY8826692.1"
                     /translation="MPHSYDYDAIVIGSGPGGEGAAMGLVKQGARVAVIERYQNVGGG
                     CTHWGTIPSKALRHAVSRIIEFNQNPLYSDHSRLLRSSFADILNHADNVINQQTRMRQ
                     GFYERNHCEILQGNARFVDEHTLVLDCPDGSVETLTAEKFVIACGSRPYHPTDVDFTH
                     PRIYDSDSILSMHHEPRHVLIYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQE
                     MSDSLSYHFWNSGVVIRHNEEYEKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTD
                     SLALQNIGLETDSRGQLKVNSMYQTAQPHVYAVGDVIGYPSLASAAYDQGRIAAQALV
                     KGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMN
                     VGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTM
                     AEAYRVAALNGLNRLF"
     gene            complement(6874..7791)
                     /gene="oxyR"
                     /locus_tag="JNZ57_000353"
     CDS             complement(6874..7791)
                     /gene="oxyR"
                     /locus_tag="JNZ57_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator OxyR"
                     /protein_id="HAY8826693.1"
                     /translation="MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELG
                     VMLLERTSRKVLFTQAGMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVG
                     PYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPL
                     FDEPMLLAIYEDHPWANRECVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTH
                     FRATSLETLRNMVAAGSGITLLPALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGS
                     PLRSRYEQLAEAIRARMDGHFDKVLKQAV"
     gene            complement(8058..9431)
                     /gene="argH"
                     /locus_tag="JNZ57_000354"
     CDS             complement(8058..9431)
                     /gene="argH"
                     /locus_tag="JNZ57_000354"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HAY8826694.1"
                     /translation="MALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKAL
                     VTVGVLTAEEQAQLEEALNVLLEDVRARPQQILESDAEDIHSWVEGKLIDKVGQLGKK
                     LHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRA
                     QPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGF
                     ASATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSG
                     SSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDT
                     WLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAV
                     VEAIRQGKPLEDLPLDELQKFSHVIGEDVYPILSLQSCLDKRAAKGGVSPQQVAQAIA
                     FAQARLG"
     gene            complement(9492..10268)
                     /gene="argB"
                     /locus_tag="JNZ57_000355"
     CDS             complement(9492..10268)
                     /gene="argB"
                     /locus_tag="JNZ57_000355"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418394.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HAY8826695.1"
                     /translation="MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGG
                     GCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGL
                     FLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVN
                     ADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKV
                     NAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA"
     gene            complement(10276..11280)
                     /gene="argC"
                     /locus_tag="JNZ57_000356"
     CDS             complement(10276..11280)
                     /gene="argC"
                     /locus_tag="JNZ57_000356"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HAY8826696.1"
                     /translation="MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKL
                     ISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDL
                     SGAFRVNDATFYEKYYGFTHQYPEQLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQ
                     LALKPLIDADLLDLNQWPAINATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPEI
                     ATHLGADVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQVLQQAYAHKPLVRLYDKG
                     VPALKNVVGLPFCDIGFAVQGEHLIIVATEDNLLKGAAAQAVQCANIRFGYAETQSLI
                     "
     gene            11434..12585
                     /gene="argE"
                     /locus_tag="JNZ57_000357"
     CDS             11434..12585
                     /gene="argE"
                     /locus_tag="JNZ57_000357"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HAY8826697.1"
                     /translation="MKNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFK
                     DLGFNVEVQPVPGTRNKFNMLASIGQGAGGLLLAGHTDTVPFDDGRWTRDPFTLTEHD
                     GKLYGLGTADMKGFFAFILDALRDVDVTKLKKPLYILATADEETSMAGARYFAETTAL
                     RPDCAIIGEPTSLQPVRAHKGHISNAIRIQGQSGHSSDPARGVNAIELMHDAIGHILQ
                     LRDNLKERYHYEAFTVPYPTLNLGHIHGGDASNRICACCELHMDIRPLPGMTFNELNG
                     LLNDALAPVSERWPGRLTVDELHPPIPGYECPPNHQLVEVVEKLLGAKTEVVNYCTEA
                     PFIQTLCPTLVLGPGSINQAHQPDEYLETRFIKPTRELIIQVIHHFCWH"
     gene            12937..15588
                     /gene="ppc"
                     /locus_tag="JNZ57_000358"
     CDS             12937..15588
                     /gene="ppc"
                     /locus_tag="JNZ57_000358"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HAY8826698.1"
                     /translation="MNEQYSALRSNVSMLGKVLGETIKDALGEHILERVETIRKLSKS
                     SRAGNDANRQELLTTLQNLSNDELLPVARAFSQFLNLANTAEQYHSISPKGEAASNPE
                     VIARTLRKLKNQPELSEDTIKKAVESLSLELVLTAHPTEITRRTLIHKMVEVNACLKQ
                     LDNKDIADYEHNQLMRRLRQLIAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWQGVP
                     NYLRELNEQLEENLGYKLPVEFVPVRFTSWMGGDRDGNPNVTADITRHVLLLSRWKAT
                     DLFLKDIQVLVSELSMVEATPELLALVGEEGAAEPYRYLMKNLRSRLMATQAWLEARL
                     KGEELPKPEGLLTQNEELWEPLYACYQSLQACGMGIIANGDLLDTLRRVKCFGVPLVR
                     IDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAE
                     TREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETL
                     DDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIK
                     TCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLP
                     EITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDVYRGYVRENKDFVPYF
                     RSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQK
                     VVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKEL
                     RNLQEEDIKVVLAIANDSHLMADLPWIAESIQLRNIYTDPLNVLQAELLHRSRQAEKE
                     GQEPDPRVEQALMVTIAGIAAGMRNTG"
     gene            15771..17504
                     /gene="cptA"
                     /locus_tag="JNZ57_000359"
     CDS             15771..17504
                     /gene="cptA"
                     /locus_tag="JNZ57_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709755.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase CptA"
                     /protein_id="HAY8826699.1"
                     /translation="MHSTEVQAKPLFSWKALGWALLYFWFFSTLLQAIIYISGYSGTN
                     GIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVLWAASLAALCYYVIYGQEFSQSVLF
                     VMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLLWTRLRPVYIPKPWRYVVSFALL
                     YGLILHPIAMNTFIKNKPFEKTLDNLASRMEPAAPWQFLTGYYQYRQQLNSLTKLLNE
                     NNALPPLANFKDESGNEPRTLVLVIGESTQRGRMSLYGYPRETTPELDALHKTDPNLT
                     VFNNVVTSRPYTIEILQQALTFANEKNPDLYLTQPSLMNMMKQAGYKTFWITNQQTMT
                     ARNTMLTVFSRQTDKQYYMNQQRTQSAREYDTNVLKPFQDVLNDPAPKKLIIVHLLGT
                     HIKYKYRYPENQGKFDGNTDHVPPGLSAEELESYNDYDNANLYNDHVVASLIKDFKAA
                     DPNGFLVYFSDHGEEVYDTPPHKTQGRNEDNPTRHMYTIPFLLWTSEKWQATHPRDFS
                     QDVDRKYSLAELIHTWSDLAGLSYDGYDPTRSVVNPQFKETTRWIGNPYKKNALIDYD
                     TLPYGDQVGNQ"
     gene            17719..18570
                     /locus_tag="JNZ57_000360"
                     /pseudo
     CDS             17719..18570
                     /locus_tag="JNZ57_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709754.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
     gene            complement(18557..18898)
                     /locus_tag="JNZ57_000361"
     CDS             complement(18557..18898)
                     /locus_tag="JNZ57_000361"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIB"
                     /protein_id="HAY8826700.1"
                     /translation="MAYLVAVTACVSGVAHTYMAAERLEKLCQLEKWGVSIETQGALG
                     TENRLADEDIRRADVALLITDIELAGAERFEHCRYVQCSIYAFLREPQRVMSAVRKVL
                     SAPQQTHLILE"
     gene            complement(18900..19778)
                     /locus_tag="JNZ57_000362"
     CDS             complement(18900..19778)
                     /locus_tag="JNZ57_000362"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418387.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[formate-C-acetyltransferase]-activating enzyme"
                     /protein_id="HAY8826701.1"
                     /translation="MTSSAGQRISCNVVETRRNDVARIFNIQRYSLNDGEGIRTVVFF
                     KGCPHLCPWCANPESISGKIQTVRREAKCLHCAKCLRDADECPSGAFERIGRDISLDA
                     LEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPVS
                     KLLPLAKLCDEVLFDLKIMDATQARDVVKMNLPRVLENLRLLVSEGVNVIPRLPLIPG
                     FTLSRENMQQALDVLIPLNIRQIHLLPFHQYGEPKYRLLGKTWSMKDVAAPSSADVAT
                     MREMAERAGFQVTVGG"
     gene            complement(19744..22041)
                     /locus_tag="JNZ57_000363"
     CDS             complement(19744..22041)
                     /locus_tag="JNZ57_000363"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HAY8826702.1"
                     /translation="MTNRISRLKTALFANTREISLERALLYTASHRQTEGEPVILRRA
                     KATAYILEHVEISIRDEELIAGNRTVKPRAGIMSPEMDPYWLLKELDQFPTRPQDRFA
                     ISEEDKRIYREELFPYWEKRSMKDFINGQMTDEVKAATSTQIFSINQTDKGQGHIIID
                     YPRLLNHGLGELVAQMQQHCQQQPENHFYQAALLLLEASQKHILRYAVLAETMAANCT
                     DAQRREELLTIAEISRHNAEHKPQTFWQACQLFWYMNIILQYESNASSLSLGRFDQYM
                     LPFYQASLTQGEDPAFLKELLESLWVKCNDIVLLRSTSSARYFAGFPTGYTALLGGLT
                     ENGRSAVNVLSFLCLDAYQSVQLPQPNLGVRTNALIDTPFLMKTAETIRLGTGIPQIF
                     NDEVVVPAFLNRGVSLEDARDYSVVGCVELSIPGRTYGLHDIAMFNLLKVMEICLHEN
                     EGNAALTYEGLLEQIRAKISHYITLMVEGSNICDIGHRDWAPVPLLSSFISDCLEKGR
                     DITDGGARYNFSGVQGIGIANLSDSLHALKGMVFEQQRLSFDELLSVLKANFATPEGE
                     KVRARLINRFEKYGNDIDEVDNISAELLRHYCKEVEKYQNPRGGYFTPGSYTVSAHVP
                     LGSVVGATPDGRFAGEQLADGGLSPMLGQDEQGPTAVLKSVSKLDNTLLSNGTLLNVK
                     FTPATLEGEAGLRKLADFLRAFTQLKLQHIQFNVVNADTLWEAQQRPQDYAGLVVRVA
                     GYSAFFVELSKEIQDDIIRRTAHQL"
     gene            complement(22092..22412)
                     /locus_tag="JNZ57_000364"
     CDS             complement(22092..22412)
                     /locus_tag="JNZ57_000364"
                     /EC_number="2.7.1.202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIB"
                     /protein_id="HAY8826703.1"
                     /translation="MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIG
                     LENELTAEDVASADMVILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHL
                     AQTA"
     gene            complement(22427..23506)
                     /locus_tag="JNZ57_000365"
                     /pseudo
     CDS             complement(22427..23506)
                     /locus_tag="JNZ57_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418384.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit EIIC"
     gene            23815..26316
                     /gene="ptsP"
                     /locus_tag="JNZ57_000366"
     CDS             23815..26316
                     /gene="ptsP"
                     /locus_tag="JNZ57_000366"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312903.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HAY8826704.1"
                     /translation="MALIVEFICELPNGVHARPASHVETLCNTFSSQIEWHNLRTDRK
                     GNAKSALALIGTDTLAGDNCQLLISGADEQEAHQRLSQWLRDEFPHCDAPLAEVKSDE
                     LEPLPVSLTNLNPQIIRARTVCSGSAGGILTPISSLDLNALSNLPAAKDVDAEQSALE
                     NGLTLVLKNIEFRLLDSDGATSAILEAHRSLAGDTSLRQHLLAGVSEGLSCAEAIVAS
                     ANHFCEEFARSSSSYLQERALDVRDVCFQLLQQIYGEQRFPAPGKLTQPAICMADELT
                     PSQFLELDKNHLKGLLLKSGGTTSHTVILARSFNIPTLVGVDIDALTPWQHQTIYIDG
                     NAGAIVVEPGEAVARYYQQEARVQDALREQQRVWLTQQARTADGIRIEIAANIAHSVE
                     AQAAFGNGAEGVGLFRTEMLYMDRTSAPGESELYNIFCQALESANGRSIIVRTMDIGG
                     DKPVDYLNIPAEANPFLGYRAVRIYEEYASLFTTQLQSILRASAHGSLKIMIPMISSM
                     EEILWVKEKLAEAKQQLRNEHIPFDEKIQLGIMLEVPSVMFIIDQCCEEIDFFNIGSN
                     DLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYAVQAVHRQGKWIGLCGELGAKGSVL
                     PLLVGLGLDELSMSAPSIPAAKARMAQLDSLECRKLLNQAMACRTSLEVEHLLAQFRM
                     TQQDAPLVTAECITLESDWRSKEEVLKGMTDNLLLAGRCRYPRKLEADLWAREAVFST
                     GLGFSFAIPHSKSEHIEQSTISVARLQAPVRWGDDEAQFIIMLTLNKHAAGDQHMRIF
                     SRLARRIMHEEFRNALVNAASADAIASLLQHELEL"
     gene            26328..26990
                     /gene="fsa"
                     /locus_tag="JNZ57_000367"
     CDS             26328..26990
                     /gene="fsa"
                     /locus_tag="JNZ57_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HAY8826705.1"
                     /translation="MELYLDTANVTEVERLARIFPIAGVTTNPSIIAASKESIWEILP
                     RLQKAIGDEGILFAQTMSRDAQGMVEEAKRLRDAIPGIVVKIPVTSEGLAAIKMLKKE
                     GITTLGTAVYSAAQGLLAALAGAKYVAPYVNRVDAQGGDGIRTVQELQALLEMHAPES
                     MVLAASFKTPRQALDCLLAGCESITLPLDVAQQMLNTPAVESAIEKFEHDWNAAFGTT
                     HL"
     gene            27001..28104
                     /gene="gldA"
                     /locus_tag="JNZ57_000368"
     CDS             27001..28104
                     /gene="gldA"
                     /locus_tag="JNZ57_000368"
                     /EC_number="1.1.1.6"
                     /EC_number="1.1.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional L-1,2-propanediol
                     dehydrogenase/glycerol dehydrogenase"
                     /protein_id="HAY8826706.1"
                     /translation="MDRIIQSPGKYIQGADVINRLGEYLKPLAERWLVVGDKFVLGFA
                     QSTVEKSFKDAGLVVEIAPFGGECSQNEIDRLRGIAETAQCGAILGIGGGKTLDTAKA
                     LAHFMGVPVAIAPTIASTDAPCSALSVIYTDEGEFDRYLLLPNNPNMVIVDTKIVAGA
                     PARLLAAGIGDALATWFEARACSRSGATTMAGGKCTQAALALAELCYNTLLEEGEKAM
                     LAAEQHVVTPALERVIEANTYLSGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVA
                     FGTLTQLVLENAPVEEIETVAALSHAVGLPITLAQLDIKEDVPAKMRIVAEAACAEGE
                     TIHNMPGGATPDQVYATLLVADQYGQRFLQEWE"
     gene            28378..28995
                     /locus_tag="JNZ57_000369"
     CDS             28378..28995
                     /locus_tag="JNZ57_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1287 domain-containing protein"
                     /protein_id="HAY8826707.1"
                     /translation="MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGAR
                     QQIGNTLFYDPAYVRLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFA
                     EYPQKWKLKRPDSNIDHRRVPNLETWFSRHNKTRPISKNAGDYQAGDIVSWRLDNGLA
                     HIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFSWRMVGHYRYFVK"
     gene            complement(29022..29969)
                     /gene="yijE"
                     /locus_tag="JNZ57_000370"
     CDS             complement(29022..29969)
                     /gene="yijE"
                     /locus_tag="JNZ57_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine transporter YijE"
                     /protein_id="HAY8826708.1"
                     /translation="MSTGKLHTGSLMSAAGKSNPLAISGLVVLTLIWSYSWIFMKQVT
                     SYIGAFDFTALRCIFGALVLFIVLLLRGRGMHPTPFKYTLAIALLQTCGMVGLAQWAL
                     VSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAILIAAFGLFLVLQPWQLDFS
                     SMKSAMLAILSGVSWGASAIVAKRLYTRHPRVDLLSLTSWQMLYAALVMSVVALLVPQ
                     REIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLSTLAVPVCGVLFSWWL
                     LGENPGAVEGSGIVLIVLIVLALALVSRKKKEAVSVKSI"
     gene            complement(30030..32210)
                     /gene="katG"
                     /locus_tag="JNZ57_000371"
     CDS             complement(30030..32210)
                     /gene="katG"
                     /locus_tag="JNZ57_000371"
                     /EC_number="1.11.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase/peroxidase HPI"
                     /protein_id="HAY8826709.1"
                     /translation="MSTSDDIHNTTATGKCPFHQGGHDQSAGAGTTTRDWWPNQLRVD
                     LLNQHSNRSNPLGEDFDYRKEFSKLDYYGLKKDLKALLTESQPWWPADWGSYAGLFIR
                     MAWHGAGTYRSIDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWA
                     DLFILAGNVALENSGFRTFGFGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLG
                     ATEMGLIYVNPEGPDHSGEPLSAAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAG
                     PTSNVGPDPEAAPIEEQGLGWASTYGSGVGADAITSGLEVVWTQTPTQWSNYFFENLF
                     KYEWVQTRSPAGAIQFDAVDAPEIIPDPFDPSKKRKPTMLVTDLTLRFDPEFEKISRR
                     FLNDPQAFNEAFARAWFKLTHRDMGPKSRYIGPEVPKEDLIWQDPLPQPIYNPTEQDI
                     IDLKFAIADSGLSVSELVSVAWASASTFRGGDKRGGANGARLALMPQRDWDVNAAAVR
                     ALPVLEKIQKESGKASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQDQTDI
                     EMFELLEPIADGFRNYRARLDVSTTESLLIDKAQQLTLTAPEMTALVGGMRVLGANFD
                     SSKNGVFTDRVGVLSNDFFVNLLDMRYEWKATDESKELFEGRDRETGEVKYTASRADL
                     VFGSNSVLRAVAEVYASSDAHEKFVKDFVAAWVKVMNLDRFDLL"
     gene            complement(32539..33429)
                     /gene="metF"
                     /locus_tag="JNZ57_000372"
     CDS             complement(32539..33429)
                     /gene="metF"
                     /locus_tag="JNZ57_000372"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HAY8826710.1"
                     /translation="MSFFHASQRDALNQSLAEVQGQINVSFEFFPPRTSEMEQTLWNS
                     IDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTI
                     ARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPEAK
                     SAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFK
                     QAKKFADMTNVRIPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYT
                     LNRAEMSYAICHTLGVRPGL"
     gene            complement(33778..36210)
                     /locus_tag="JNZ57_000373"
     CDS             complement(33778..36210)
                     /locus_tag="JNZ57_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000110794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase II"
                     /protein_id="HAY8826711.1"
                     /translation="MSVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDM
                     MVVSAAGSTTNQLINWLKLSQTDRLSAHQVQQTQRRYQCDLISGLLPAEEADSLISAF
                     VSDLERLAALLDSGINDAVYAEVVGHGEVWSARLMSAVLNQQGLPAAWLDAREFLRAE
                     RATQPQVDEGLSYPLLQQLLVQHPGKRLVVTGFISRNNAGETVLLGRNGSDYSATQIG
                     ALAGVSRVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASELARLAAPVLHARTLQPV
                     SGSEIDLQLRCSYTPDQGSTRIERVLASGTGARIVTSHDDVCLIEFQVPASQDFKLVH
                     KEIDQILKRAQVRPLAVGVHNDRQLLQFCYTSEVADSALKILDEAGLPGELRLRQGLA
                     LVAMVGAGVTRNPLHCHRFWQQLKGQPVEFTWQSDDGISLVAVLRTGPTESLIQGLHQ
                     SVFRAEKRIGLVLFGKGNIGSRWLELFAREQSTLSARTGFEFVLAGVVDSRRSLLSYD
                     GLDASRALAFFNDEAVEQDEESLFLWMRAHPYDDLVVLDVTASQQLADQYLDFASHGF
                     HVISANKLAGASDSNKYRQIHDAFEKTGRHWLYNATVGAGLPINHTVRDLIDSGDTIL
                     SISGIFSGTLSWLFLQFDGSVPFTELVDQAWQQGLTEPDPRDDLSGKDVMRKLVILAR
                     EAGYNIEPDQVRVESLVPAHCEGGSIDHFFENGDELNEQMVQRLEAAREMGLVLRYVV
                     RFDANGKARVGVEAVREDHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGA
                     IQSDINRLAQLL"
     gene            complement(36213..37373)
                     /gene="metB"
                     /locus_tag="JNZ57_000374"
     CDS             complement(36213..37373)
                     /gene="metB"
                     /locus_tag="JNZ57_000374"
                     /EC_number="2.5.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase"
                     /protein_id="HAY8826712.1"
                     /translation="MTRKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAH
                     DYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYG
                     GSYRLFDSLVKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKIC
                     HLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDV
                     VTELAWWTNNIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLY
                     HPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLI
                     SHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAANKG"
     gene            37650..37967
                     /gene="metJ"
                     /locus_tag="JNZ57_000375"
     CDS             37650..37967
                     /gene="metJ"
                     /locus_tag="JNZ57_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015855437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="met regulon transcriptional regulator MetJ"
                     /protein_id="HAY8826713.1"
                     /translation="MAEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRR
                     QVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPET
                     WEY"
     gene            38151..38759
                     /locus_tag="JNZ57_000376"
     CDS             38151..38759
                     /locus_tag="JNZ57_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiX family permuted papain-like enzyme"
                     /protein_id="HAY8826714.1"
                     /translation="MKNRLLILSLLVSVPAFAWQPQTGDIIFQISRSSQSKAIQLATH
                     SDYSHTGMLVIRNKKPYVFEAVGPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQK
                     LAQTVKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLV
                     QAKLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEWPLFSW"
     gene            38904..39596
                     /locus_tag="JNZ57_000377"
                     /pseudo
     CDS             38904..39596
                     /locus_tag="JNZ57_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(39751..39987)
                     /locus_tag="JNZ57_000378"
     CDS             complement(39751..39987)
                     /locus_tag="JNZ57_000378"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8826715.1"
                     /translation="MKAIQCCYFLALVSSNLMAGVMGNDNIFLSNSDSAVLYCVAKIF
                     PDGENILIYKVNIINASSKKDVFFMKAQHQPTMT"
     gene            complement(39989..40645)
                     /locus_tag="JNZ57_000379"
                     /pseudo
     CDS             complement(39989..40645)
                     /locus_tag="JNZ57_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001676837.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4329 domain-containing protein"
BASE COUNT        10006 a        11175 c        10094 g         9382 t
ORIGIN      
        1 cattcaacca aatcagccta aaactgccag tttttcgagc gtttcgaagc cgtaacgctg
       61 taaaacgggc aataattgtt cagcttctgg cgtcattgcc atacaaaagg caatattcgc
      121 atcggcagat tttgcatccg gggcttcatg ttctaacaac caggccgttc ggcgagcaat
      181 cgctgcgcca gaatccacta gccgggttcc ctctggcagc acttgtaaca gttcttcttg
      241 tagtagaggg aaatgggtgc aacccaatac aacggtatct ggcggctctt tcattcttaa
      301 ccacgggcgt aggatacgtt ttagtgcatc cagagaaaca tcttcgccat gtagcttcgc
      361 ttcagccaac tcaaccatct ctgccgagcc cagcatttct atctggcatt cattagcgaa
      421 acgcgcgatc agctcatgag tataggaacg tttaactgtt ccgcgggttg ccagtaatcc
      481 gacaatgcta tttgccgtca gacgtgcagc aggtttaatc gccggcacga caccaacaac
      541 cggaaagtcg aacttttcgc gtaatgcagg aagtgaaacg gtactggcag tgttgcaagc
      601 gaccacagcc agcgcaaggg gataacgttc ttgcaccgcg gtgacaattg ccaccactcg
      661 ctcaacaata aacgcttcgc ttttttcgcc atacgggaaa gcgacgttat cgaaagcata
      721 aatgtaatgg agatccggta agagatgccg gatctcgtca tagaccgaca acccaccgac
      781 gccggagtca aacaccagca cggtgggacg tggttcagaa ggtgtagctg ccagacaagg
      841 tgtattcccg tcctgcagtt tggtagccat agactgtctc ataatctttg tcgaacaggt
      901 tggctatttt accacgaact gtcaggtgag aggtgaccgg atacgcaacc gcaagatccc
      961 acaagctcac accgcccatt ttaacggttt gataaggata agatgagtaa tccttatcat
     1021 agcgagtgcc taaatactga taagtaatac cccagtcgaa gtcatacaac tgccagtcga
     1081 gctggtattt cacctgctgt ttagcacggc gtaacaacgg cgtgtcggta atcgcattgc
     1141 gcgcatcgac ataatcataa ctcacagtat gcgtcagtgg tccggtatca aaattggcgg
     1201 tcgcctcgac gcccttaatc cgcgctttcc cttcgttgta atatttcagg gtgtgatcat
     1261 cataatcgat caagtcactg acatcgttac gatatccgga aatacgccag ttcaccccag
     1321 cggttaagcc ttcaaacgcg ccttcccact gtttgctttt ctccgggtcc agattcggat
     1381 ttccgtagaa gccatacagt tgccccaaat ttggtgcctt ataagatgtc ccgtaggaag
     1441 caatgaagcg ataaccttcg atgaattccc aaccggcgct ggtttgccag gttccatgac
     1501 gaccaaactg tgagttatcg tcactgcgtg ctgcgccttc aaaggtaaaa tcgccgactt
     1561 gttgcagccc ggtcagatag atgccggtat tacgttgatc atatccatcc tcaacataac
     1621 ctgtacccgg cgtcgtagtc tgtttctgcc agtcgacacc cgcaccaata ctaccgtgac
     1681 caacgatgac attgtttgcc cactggacgg tgtattgctt catctcatcg agcgtcgccg
     1741 acgaatcata acgaccataa tggggatcgt agttgtaatc tttgctatgg ctatagctgg
     1801 taatgagttg tgatttaatc agttcgccgt tatagcgcag cccggcgtcc caactttggc
     1861 tatagagttt acgggtatcg agcaacggtg aaccgggaga ataatacgcg tcataattgg
     1921 tacggttatc atagccatag ccgcgcacaa agccgctcca ggcatcagta aagttatgct
     1981 ccagcgcgcc ataaagcgtt ttacttaaaa aaccatcgtt atctgtctgc gcttgcgttc
     2041 cggtattacc ataggcaaca acatcataac catgagtatg ggcataatcg cccaacagcg
     2101 ttacccgtgt cttatccccc agttgttgct gcgtagagac atcatagttc tgataactat
     2161 tgcttcccca ccctgctgaa atttccgttc cgggttcatc gcgcgtcgtg atgatattca
     2221 ccaccccgcc tattgcatcg gaaccataaa cagcggagcg cggcccacgg atatattcaa
     2281 cacgctggac aagcgcacgc aatagggaac tggctaaggt cggcagaacc actcaccccc
     2341 gccagattca ggcgtacgcc atcaattaac accaacacat gactggcatt tgtaccgcga
     2401 ataaaaatag atgagagctg acctgaaccg ccgttttggg tgatatcgac gcccggaaga
     2461 cggcgcagca catcattgac cgaggtcgac tgccagcggt cgatatcctg acgggtcaca
     2521 acggtggttg gtgcaagcac agtgctgcgc ggctgttcaa aacggttagc agtaacgacg
     2581 agagtatccg ggctggtatc ctgtgcccaa gcggaaaagg ctgtgacaga acacgccgtc
     2641 agcagcgaag cttttttaat cattgtaaag catccacaat agaagaagga tgccgcaggt
     2701 ttcatcaata ttacgcgatg atgagacgtt ggccggcagg tcttcgggct tggaggggta
     2761 tctaagatac taagagatga tgacttccca ccggatggca gtgtccgcat aacgcaatca
     2821 tcgcaccttt ccttaccgct gcgcgtcagc tccagattcg cactggattc cctattaact
     2881 cacaggaccg gcaagtggat gctacaggtt gtaacaagtt actgtccaga cgtagctcac
     2941 aaataggaat tcatcaagat ctggacatct gatgagcaat ccctacaatc gccgcgtact
     3001 ttaatttttc aggatacatc atgacccccg aacaccttcc aacagaacag tatgaagcgc
     3061 agttagccga aaaagtggta cgtttgcaaa gtatgatggc accgttttct gacctggttc
     3121 cggaagtgtt tcgctcgccg gtcagtcatt accggatgcg tgcggagttc cgcatctggc
     3181 acgatggcga tgacctgtat cacatcattt tcgatcaaca aaccaaaagc cgtatccgcg
     3241 tggatagctt ccccgccgcc agtgaactta tcaaccagtt gatgacggcg atgattgcgg
     3301 gtgtgcgtaa taatcccgtt ctgcgccaca agttgttcca gattgattac ctcaccacgc
     3361 tgagtaatca ggcggtggtt tccctgctat accataagaa gctggatgat gagtggcgtc
     3421 aggaagcgga ggccctgcgc gatgcactgc gcgcgcagaa tctgaatgtg catctgattg
     3481 gtcgggcaac gaaaaccaaa atcgagctgg atcaagatta catcgacgag cgtctgccgg
     3541 tcgcagggaa agagatgatc taccgtcagg tagaaaacag ctttacccag ccgaacgcgg
     3601 cgatgaatat tcagatgctg gaatgggcgc tggacgtaac caaaggctca aaaggcgatt
     3661 tactggagct gtactgcggc aacggtaact tttcattagc gctggcgcgc aattttgatc
     3721 gggtattagc caccgaaatc gctaagccgt cggttgctgc tgcgcaatac aacatcgcag
     3781 ctaaccatat tgataacgta caaattattc gtatggcggc agaagaattt actcaggcga
     3841 tgaatggtgt gcgcgagttt aaccgcctgc aagggatcga cttaaagagt tatcagtgcg
     3901 aaaccatttt tgtcgaccca ccgcgcagcg gtctggacag tgaaaccgag aaaatggtgc
     3961 aggcgtatcc gtgtattttg tacatctcct gtaacccgga aacgttatgc aagaatctgg
     4021 aaacattaag ccagacgcac aaggtcgaac gtctggctct gtttgatcag ttcccctaca
     4081 cgcaccatat ggagtgcggc gtattactga ccgcgaagta aaacccatgc cggatgcgcc
     4141 agcatccggc ataataccga ttactcagca acttcctgct tacggttacg catcttcgcg
     4201 ccaatccaga acaccataat gacggagagt actgccggga agaagttaga gccgatatcc
     4261 ggatattccg cacgaactac cgtgctgtac agcagtacgc cgagaataaa acaggcagct
     4321 gccagacccg gcaagcctac cggcatagtg cgattaagat aacgttgatg caggcagtaa
     4381 accgtcagca ccagggaaat aatcgggaat acagaaaatg gcacaatgga gctaaacagc
     4441 gctgcgaaag taccattaat cgataagcca gcaactaacg ccagcagcag cgtacctcta
     4501 tcttgatttg cttgtttcat tactcgtcct tcacatttcc cggaataatt gcggttttct
     4561 cttgttcacg gcgataccag taataagccc ctttcgaaat cattcgcagt tgcagtacca
     4621 gtcgctcttc taattgccga cgttgttcga cgccgacgtc caacgcctcg gcacccgcac
     4681 tgaagacaat tgtcaccatt gcttcggctt gcgcttcagt aaacgcacgc ggcatatggt
     4741 tttcgagttc cagatagtcc gcaagttccg caatgaagtg ctgaatttca cgcgcaacgg
     4801 cggcacgaaa cgcagcggag gtgccggagc gttcccgcaa taataaccgg aaggcgttag
     4861 gattattacc gatgaactcc ataaatgtgg agaccgaggt gcggatcaca ctcccgcctt
     4921 tggcgatacg ctgacgcgcc tggcgcatga gttggcgtag cattaaaccg ctctcatcaa
     4981 ccatggtcag acccagttcg tctacgtcgc ggaaatgccg ataaaaagag gtgggagcaa
     5041 tgcccgcttc acgcgccact tcacgcaaac tcaggctggc gaagctgcgt tcagcactta
     5101 attggctaaa tgcggcttcc accagcgaac ggcgggtttt ttctttttgt tgcgctctta
     5161 tgcccatcac gatgtctgaa tccttgccaa aagtactgct ggcactatac cagagaatga
     5221 acatactgga ttgctccagt attgtgaatg aacggtaacg caataaaaca tatttactgg
     5281 ccggttcttt tacgtacagc ggaaacctgc cgcttaaacg gagagtatcg tcgataaaaa
     5341 tccaataaaa cgtcagggca aaagtaagaa acagacaaag caaaggccgc tcaggatata
     5401 gccagataaa tgacggggat caattggctt acccgcgata aaatgttacc attctgttgc
     5461 ttttatgtat aagaacaggt aagccctacc atgccacatt cctacgatta cgatgccata
     5521 gtaataggtt ccggccccgg cggcgaaggc gctgcaatgg gcctggttaa gcaaggtgcg
     5581 cgcgtcgcag ttatcgagcg ttatcaaaat gttggcggcg gttgcaccca ctggggcacc
     5641 atcccgtcga aagctctccg tcacgccgtc agccgcatta tagaattcaa tcaaaaccca
     5701 ctatacagcg accattcccg actgctccgc tcttcttttg ccgatatcct taaccatgcc
     5761 gataacgtga ttaatcaaca aacgcgcatg cgtcagggat tttacgaacg taatcactgt
     5821 gaaatattgc aggggaacgc tcgctttgtt gacgagcata cgttggtgct ggattgcccg
     5881 gacggcagcg tcgaaacact aaccgctgaa aaatttgtta ttgcctgcgg ctctcgtcca
     5941 tatcatccaa cagatgttga tttcacccat ccacgcattt acgacagcga ctcaattctt
     6001 agcatgcacc acgaaccgcg ccatgtactt atctatggtg ctggagtgat cggctgtgaa
     6061 tatgcgtcga tcttccgcgg tatggatgta aaagtggatc tgatcaacac ccgcgatcgc
     6121 ctgctggcat ttctcgatca agagatgtca gattctctct cctatcactt ctggaacagt
     6181 ggcgtagtga ttcgtcacaa cgaagagtac gagaagatcg aaggctgtga cgatggtgtg
     6241 atcatgcatt tgaagtcggg taaaaaactg aaagctgact gcctgctcta tgccaacggt
     6301 cgcaccggta ataccgattc gctggcgtta cagaacattg ggctggaaac tgacagccgc
     6361 ggacagctga aggtcaacag catgtatcag accgcacagc cgcacgttta cgcggtgggc
     6421 gacgtgattg gttatccgag cctggcatca gcggcctatg accaggggcg cattgccgcg
     6481 caggcgctgg taaaaggcga agccaccgca catctgattg aagatatccc taccggcatt
     6541 tacaccatcc cggaaatcag ctctgtgggc aaaaccgaac agcagctgac cgcaatgaaa
     6601 gtgccatatg aagtgggccg cgcccagttt aaacatctgg cacgcgcaca aatcgtcggc
     6661 atgaacgtgg gcacgctgaa aattttgttc catcgggaaa caaaagagat tctgggtatt
     6721 cactgctttg gcgagcgcgc tgccgaaatt attcatatcg gtcaggcgat tatggaacag
     6781 aaaggtggcg gcaacactat tgagtacttc gtcaacacca cctttaacta cccgacgatg
     6841 gcagaagcct atcgggtagc tgcgctaaat ggcttaaacc gcctgtttta acactttatc
     6901 gaaatggcca tccattcttg cgcggatggc ctctgccagc tgctcatagc ggctgcgcag
     6961 cggtgagcca ggacgataaa ccaggccaat cgtgcggcga ggttccggct taatacacgg
     7021 caaataaaca accccatcgc gtttgcgctc cggcggcaca gccagcgcag gcagtaaagt
     7081 gatcccgcta cctgccgcca ccatgttacg cagtgtctcc aggctggtcg cgcggaagtg
     7141 tgtatcttca tccgccccgg cttcaaagca gaaacccatt gcctgatcgc gcaaacagtg
     7201 accatcttcc agcatcagca gtttttcccc tgccagatcg gccatcggta cgcattcgcg
     7261 gttcgcccac gggtgatctt catagatagc cagcaacatt ggctcatcaa acaacggcac
     7321 ttcaatgaat gcttcgctct ctttcaccag cgcgaggatc acgcaatcga gtttgccgct
     7381 gtccagttgc gccagtaact ggtgggtctg tgcttcatgc agatacattt ccagctttgg
     7441 aaatgtctgg tgcagcatcg ggataatatg cggcagcagg tacggtccaa ccgtaggaat
     7501 caaaccaata tgcagcggtc cggacatcgt ctcgccctgc tggcttgcca tctctttaag
     7561 gactttcacc tcacgcagca cggtacgcgc ctgatccacc agcagcattc ccgcctgggt
     7621 gaacaacact ttacggctgg tccgctccag caacatcacg cccagctcat cttccagctt
     7681 acgaatttgg ccgctaagcg tcggctggct aacgtggcag gaatctgccg cacgccgaaa
     7741 atggcggtgt tcagccaatg ccaccaggta ctcaagatca cgaatattca ttatccatcc
     7801 tccatcgcca cgatagttca tggcgatagg tagaatagca atgaacgact atccctatca
     7861 agcattctga ctgataattg ctcacagaaa cggagcggca cctcttttaa cccttgaagt
     7921 cactgcccgt ttcgagagtt tctcaactcg aataactaaa gccaacgtga acttttgcgg
     7981 atctccagga tccgcttttt tttgccataa aaaagcccgg cgataagcca ggctcaaatt
     8041 tgtacatata aatgttctta ccccaaccgc gcctgcgcaa aagcaatcgc ttgggccacc
     8101 tgctgcggtg agacaccgcc ttttgccgca cgcttgtcga ggcacgattg tagcgacaga
     8161 atcggataga catcttcgcc aatcacgtgg ctgaatttct gcaactcgtc gagcggcaga
     8221 tcttccagcg gtttgccctg acgaatggct tccaccaccg cttcacccac gatatggtgc
     8281 gcctcgcgga aaggtacgcc tttcgccacc aggtaatccg ccagttcggt ggcgttggcg
     8341 taaccctgct gagccgcttc ctggcaacgt ggacgtttca cctgaatgcc gtccagcacc
     8401 agcgccgcca tatgcaggca gtccagccag gtatcgagcg cgtcgaacag accttctttg
     8461 tcttcctgca tatctttgtt gtaagccagc ggcaaacctt tcagcgtcat catcatgccg
     8521 gttaacgcac cctgcacccg accgcattta ccgcgaatca gctccagcgc atccgggttt
     8581 ttcttctgcg gcattaatga tgaaccggaa gtcacgcggt cagaaagctc cacaaacccc
     8641 gcttcgccgg tgttaaagaa aatcagatct tcagcaaaac gcgacagatg caccatgccg
     8701 atagcggcag ccgacagcag ttccaacaca tggtcacggt cagaaacgct gtccagactg
     8761 ttacgggtcg ccgaagcaaa gcccagccag cctgctaact gttcacggtc gatttcatag
     8821 gccgttcccg ccagcgcgcc acagcctaat gggctgacat ccagacgctt aagcgcatcc
     8881 tgcaaacggc tttcatcacg cgccagcatc tcaacatagg ccaggcacca gtgcgcgaac
     8941 gtcaccggct gggcgcgttg caggtgagtg taacctggca ttaccgcgtc ctgattgttt
     9001 tgtgcggttt ccaccagcgc cgattgcagc tgccggttag ccgtcagtaa ctcgctaacg
     9061 gtatctttgc accacagttt caggtcagtc gctacctgat cattacggct acgcccggta
     9121 tgcagctttt tgcctaactg gcccactttg tcgatcagtt tgccttccac ccagctatgg
     9181 atatcttcgg cgtcgctttc aaggatttgt tgtggcctgg cgcgaacatc ttccagcaac
     9241 acgttcagcg cctcttccag ttgcgcctgc tcttctgcgg ttaacacgcc gaccgttact
     9301 agggctttgg accaggccac agagccaaca atatcctgct ccgccagacg gtaatcaaag
     9361 cgcagtgagt cgttgaattg tttgaaccgt tgatctgctg cctgggtaaa acgcccgccc
     9421 caaagtgcca taactctgtt tccttatttt gaaattcaat gccggaaagc tgcgcctccg
     9481 gctaacaaaa cttaagctaa aatccgcgta cccatcggca taccgttaaa cagtgccgga
     9541 agctgctccg catgacgcca ggaggcgata tctaccggac ggcccagcgt gcgggccgca
     9601 tccagcgccg cgttcacttt cactatcatg ccgtcagtaa taatgccctg ctcaatcagt
     9661 tgttctgctt tcgcggcggt catttcggca atgcgttgcc ctttgccgtc gagaatgccg
     9721 ctgacgtcgg agagcaaaat cagatccgcg cccagcgttg ccgccagcgc cgttgccgcc
     9781 tggtcggcat tgacgttcat cagttgccct tcgtctgtta cgccaatgga gctgaccacc
     9841 ggcagataac cgttctccag caaggagttg ataagcttag gcgaacctgg ctgcgccagt
     9901 ccaacatgac ctaactcttc atcaagctgg gtcactttga cgctgtcgcc atcaccgaga
     9961 aacaaaccta cggccgcaat ctgatgtttc ttcgcccatg ccaacagggt tttatttgcc
    10021 gttcccgcca gtgctccggt gataatgtct atctgatcag caggcgtcac ccgcaggccg
    10081 tttttctttt tcaccggcag attcagccct ttcatcagct catccaccac gcaaccgccg
    10141 ccgtgcacaa tcaccagcgg acgctgatgt gactcacgat aattcaccag tgcgctaaac
    10201 agacgttcca gcgcctcttc actatccagc agtacgccgc ccagtttgat aattaatgga
    10261 ttcatcattg cacccttaaa taagagactg cgtttccgca tagccgaaac gaatattggc
    10321 gcactgtacc gcttgtgccg ccgcgccttt cagtaagttg tcttcggtcg ccacaataat
    10381 cagatgctcg ccctgaacgg caaacccgat atcgcaaaat ggcagcccaa cgacattttt
    10441 cagcgccgga acgcctttgt catacagccg caccagcggt ttatgggcat acgcctgctg
    10501 taacacttgc gcgacttgcg cctgggtcac acccgatttc aggcggcagg taatggtttc
    10561 gagaatgccg cgcgggaaat tgcccagatg tggggtgaag ataacgtcag caccgaggtg
    10621 tgtggcgatc tctggttgat ggcgatgagt aaagacgcca tacggttgca ggctaacttc
    10681 acaaaaacta tttgaaatcg ctgccttacg tcctgcaccg ctcacgccgc tggtggcgtt
    10741 gatcgccggc cactgattga ggtcaagaag atcggcatca atcaacggtt tcagcgccag
    10801 ctgtgccgcc gtcggataac agcctggcac cgcaatcaaa ttcgcttctt ttaatttatt
    10861 accgcaccac tccgccagac cgtaggctgc ctgttccagc tgttccgggt attgatgggt
    10921 aaagccgtaa tatttttcat agaaggtggc gtcgttaaca cgaaacgcgc cggaaaggtc
    10981 gaacaccacg cagcccgctt caagaaactg cggcgctaaa tcgtggctaa cttcatgggc
    11041 ggtggcgaga aacactacgt ccacccctgg gctaaactcg ctgatatccg acatcggctg
    11101 caacggcagc tcaacgatgc cttttagctg cggatgcaaa tcggagatta actttcccgc
    11161 atcattgctt tgcgctgaaa cagtcaaagc ggttatgttc atatgcggat ggcgatttac
    11221 ataggtcact agctctgcgc cagcgtagcc gctggcaccc acaatcagcg tattcaacat
    11281 cggggctatt caccttctta tgtctggttg ccaggttaaa cgtaaaacat tcaccttacg
    11341 gctggtgggt tttattacgc tcaacgttag tgtattttta ttcataaata ctgcatgaat
    11401 attgatacta tcatgaccag aggtgtgtca acaatgaaaa acaaattacc gccatttatc
    11461 gagatttacc gcgctctgat tgccacacct tcaataagcg ctacggaaga ggcactcgat
    11521 caaagcaatg cagatttaat cactctgctg gcggactggt ttaaagattt gggcttcaat
    11581 gtggaagtgc agcctgttcc aggaactcgc aacaaattca atatgctggc aagtatcgga
    11641 cagggggctg gcggcttgtt gctggcgggg cataccgata cggtgccatt tgatgacggt
    11701 cgctggacgc gcgatccgtt tacactgacg gagcatgacg gcaagcttta cggcttaggc
    11761 accgccgaca tgaaaggctt ttttgcgttt atccttgatg cgctacgcga tgtcgacgtc
    11821 acgaaactga aaaaaccgct ctacattctg gcgactgctg atgaagaaac cagtatggcc
    11881 ggagcgcgtt attttgccga aactaccgcc ctgcgcccgg attgcgccat cattggcgaa
    11941 ccgacgtcac tacaaccggt acgcgcacat aaaggtcata tctctaacgc catccgtatt
    12001 cagggccagt cggggcactc cagcgatcca gcacgcggag ttaacgctat cgaactaatg
    12061 cacgacgcca tcgggcatat tttgcaattg cgcgataacc tgaaagaacg ttatcactac
    12121 gaagcattta ccgtgccata ccctacgctc aacctcgggc atattcacgg tggcgacgct
    12181 tctaaccgta tttgcgcttg ctgtgagttg catatggata ttcgtccgct gcctggcatg
    12241 acattcaatg aacttaatgg tttgctcaac gatgcattgg ctccggtgag cgaacgctgg
    12301 ccgggtcgtc tgacggtcga cgagctgcat ccgccgatcc ctggctatga atgccctccg
    12361 aatcatcaac tggttgaagt ggttgagaaa ttgcttggag caaaaaccga agtggtgaat
    12421 tactgtaccg aagcgccgtt tattcaaacg ttatgcccga cgctggtgct cggtccgggt
    12481 tccatcaatc aagctcatca gcctgatgaa tatctggaga cgcggtttat taaacccacc
    12541 cgtgagttga ttatccaggt aattcaccat ttttgctggc attaaaacgt aggccggata
    12601 aggcgctcgc gccgcatccg gcaccgttgc caaactccgg tgccgcaata atgtcggatg
    12661 cgatgcttgc gcatcttatc cgacctacac ctttggtgtt atgtatggcg attttttaac
    12721 atttccataa gttacgctta tttaaagcgt cgtgaattta atggcgtaaa ttcctgctat
    12781 ttattcgttt gctgaagcga tttcgcagca tttgacgtca ccgcttttac gtggctttat
    12841 aaaagacgac gaaaagcaaa gcccgagcat attcgcgcca atgcgacgtg aaggatacag
    12901 ggctatcaaa cgataagatg gggtgtctgg ggtaatatga acgaacaata ttccgcattg
    12961 cgtagtaatg tcagtatgct cggcaaagtg ctgggagaaa ccatcaagga tgcgttggga
    13021 gaacacattc ttgaacgcgt agaaactatc cgtaagttgt ccaaatcttc acgcgctggc
    13081 aatgatgcta accgccagga gttactcacc accttacaaa atttgtcgaa cgacgagctg
    13141 ctgcccgttg cgcgtgcgtt tagtcagttc ctgaacctag ccaacaccgc cgagcaatac
    13201 cacagcattt cgccgaaagg cgaagctgcc agcaacccgg aagtgatcgc ccgcaccctg
    13261 cgtaaactga aaaaccagcc ggaactgagc gaagacacca tcaaaaaagc agtggaatcg
    13321 ctgtcgctgg aactggtcct cacggctcac cctaccgaaa ttacccgtcg tacactgatc
    13381 cacaaaatgg tggaagtgaa cgcctgctta aaacagctcg ataacaaaga tatcgctgac
    13441 tacgaacaca accagctgat gcgtcgcctg cgccagttaa tcgcccagtc atggcatacc
    13501 gatgaaatcc gtaagctgcg tccaagcccg gtagatgaag ccaaatgggg ctttgccgta
    13561 gtggaaaaca gcctgtggca aggcgtacca aattacctgc gcgaactgaa cgaacaactg
    13621 gaagagaacc tcggctacaa actgcccgtc gaatttgttc cggtccgttt tacttcgtgg
    13681 atgggcggcg accgcgacgg caacccgaac gtcactgccg atatcacccg ccacgtcctg
    13741 ctactcagcc gctggaaagc caccgatttg ttcctgaaag atattcaggt gctggtttct
    13801 gaactgtcga tggttgaagc gacccctgaa ctgctggcgc tggttggcga agaaggtgcc
    13861 gcagaaccgt atcgctatct gatgaaaaac ctgcgttctc gcctgatggc gacacaggca
    13921 tggctggaag cgcgcctgaa aggcgaagaa ctgccaaaac cagaaggcct gctgacacaa
    13981 aacgaagaac tgtgggaacc gctctacgct tgctaccagt cacttcaggc gtgtggcatg
    14041 ggtattatcg ccaacggcga tctgctcgac accctgcgcc gcgtgaaatg tttcggcgta
    14101 ccgctggtcc gtattgatat ccgtcaggag agcacccgcc ataccgaagc gctgggcgag
    14161 ctgacccgct acctcggtat cggcgactac gaaagctggt cagaggccga caaacaggcg
    14221 ttcctgatcc gcgaactgaa ctccaaacgt ccgcttctgc cgcgcaactg gcaaccaagc
    14281 gccgaaacgc gcgaagtgct cgatacctgc caggtgattg ccgaagcgcc gcaaggctcc
    14341 attgccgcct acgtgatctc gatggcgaaa acgccgtccg acgtactggc tgtccacctg
    14401 ctgctgaaag aagcgggtat cgggtttgcg atgccggttg ctccgctgtt tgaaaccctc
    14461 gatgacctga acaacgccaa cgatgtcatg acccagctgc tcaatatcga ctggtatcgc
    14521 ggcctgattc agggcaaaca gatggtgatg attggctatt ccgactcagc aaaagatgcg
    14581 ggcgtgatgg cagcgtcctg ggcgcaatat caggcacagg atgcattaat caaaacctgc
    14641 gaaaaagcgg gtattgagct gacgttgttc cacggtcgcg gcggttccat tggtcgcggc
    14701 ggcgcacctg cccatgcggc actgctgtca caaccgccag gaagcctgaa aggcggcctg
    14761 cgcgtaaccg aacagggcga gatgatccgc tttaaatatg gtctgccaga aatcaccgtc
    14821 agcagcctgt cgctttatac cggggcgatt ctggaagcca acctgctgcc accgccggag
    14881 ccgaaagaga gctggcgtcg cattatggat gaactgtcag tcatctcctg cgatgtctac
    14941 cgcggctacg tacgtgaaaa caaagatttt gtgccttact tccgctccgc tacgccggaa
    15001 caagaactgg gcaaactgcc gttgggttca cgtccggcga aacgtcgccc aaccggcggc
    15061 gtcgagtcac tacgcgccat tccgtggatc ttcgcctgga cgcaaaaccg tctgatgctc
    15121 cccgcctggc tgggtgcagg tacggcgctg caaaaagtgg tcgaagacgg caaacagagc
    15181 gagctggagg ctatgtgccg cgattggcca ttcttctcga cgcgtctcgg catgctggag
    15241 atggtcttcg ccaaagcaga cctgtggctg gcggaatact atgatcaacg cctggtagac
    15301 aaagcactgt ggccgttagg taaagagtta cgcaatctgc aagaagaaga catcaaagtg
    15361 gtgctggcga ttgccaacga ttcccatctg atggccgatc tgccgtggat tgcagagtct
    15421 attcagctac ggaatattta caccgacccg ctgaacgtat tgcaggccga gttgctgcac
    15481 cgctcccgcc aggcagaaaa agaaggccag gaaccggatc ctcgcgtcga acaagcgtta
    15541 atggtcacta ttgccgggat tgcggcaggt atgcgtaata ccggctaatc ttcctcttct
    15601 gcaaaccctc gtgcttttgc gcgagggttt tctgaaatac ttctgttcta acaccctcgt
    15661 tttcaatata tttctgtctg cattttattc aaattctgaa tataccttca gatatcctta
    15721 aggaattgtc gttacattcg gcgatatttt tttcaagact ggttcttact atgcattcca
    15781 cagaagtcca ggctaaaccc ctttttagct ggaaagccct gggttgggca ctgctctact
    15841 tttggttttt ctctactctg ctacaggcca ttatttacat cagtggttat agtggcacca
    15901 acggcattcg cgactcgctg ttattcagct cgctgtggtt gatcccggta ttcctctttc
    15961 cgaagcggat taaaattatt gccgcagtaa tcggcgtggt gctatgggcg gcctctctgg
    16021 cggcgctatg ctactacgtc atctacgggc aggagttctc gcagagcgtt ctgtttgtga
    16081 tgttcgaaac caacaccaac gaagccagcg agtatttaag ccagtatttc agcctgaaaa
    16141 ttgtgcttat cgcgctggcc tatacggcgg tggcagttct gctgtggaca cgcctgcgcc
    16201 cggtctatat tccaaagccg tggcgttatg ttgtctcttt tgccctgctt tatggcttga
    16261 ttctgcatcc gatcgccatg aatacgttta tcaaaaacaa gccgtttgag aaaacgttgg
    16321 ataacctggc ctcgcgtatg gagcctgccg caccgtggca attcctgacc ggctattatc
    16381 agtatcgtca gcaactaaac tcgctaacaa agttactgaa tgaaaataat gccttgccgc
    16441 cactggctaa tttcaaagat gaatcgggta acgaaccgcg cactttagtg ctggtgattg
    16501 gcgagtcgac ccagcgcgga cgcatgagtc tgtacggtta tccgcgtgaa accacgccgg
    16561 agctggatgc gctgcataaa accgatccga atctgaccgt gtttaataac gtagttacgt
    16621 ctcgtccgta caccattgaa atcctgcaac aggcgctgac ctttgccaat gaaaagaacc
    16681 cggatctgta tctgacgcag ccgtcgctga tgaacatgat gaaacaggcg ggttataaaa
    16741 ccttctggat caccaaccag cagacgatga ccgcccgcaa taccatgctg acggtatttt
    16801 cgcgccagac cgacaagcag tactacatga accagcaacg tacgcagagt gcgcgtgaat
    16861 acgacaccaa cgtgctgaag ccgttccagg atgtgctgaa tgaccctgcg ccgaagaaac
    16921 tgatcatcgt tcatctgctg ggtacgcata tcaaatacaa ataccgctac ccggaaaatc
    16981 agggcaagtt tgatggcaat accgatcatg ttccgccagg attaagcgca gaagagctgg
    17041 aatcatataa cgattatgac aacgctaact tgtataacga tcatgtggtt gccagcctga
    17101 ttaaagactt taaagcggca gacccgaacg gattccttgt ttacttctct gaccacggtg
    17161 aagaggttta cgacacgccg ccgcacaaaa ctcaggggcg taacgaagac aacccgacgc
    17221 gccacatgta caccattccg ttcctgctgt ggacgtcgga aaaatggcaa gcgactcatc
    17281 cccgtgattt ctcacaggat gtcgatcgta aatacagcct ggcggaactg atccacacct
    17341 ggtcagattt ggcgggctta tcttacgacg gttacgatcc aacccgttca gtggtgaatc
    17401 cgcagttcaa agaaactacc cgctggattg gtaacccgta caagaaaaac gcgctgatcg
    17461 attacgacac tctgccgtat ggcgaccagg taggtaatca gtaattatca gccaggcgct
    17521 atttgccgga tgcgacgctt gacgcgtctt atccggccta cagatcgcgg cggtaggctg
    17581 gataaggcgt ttacgccaca tccggcaata caactgccgc aatgtttaca tcgaactccc
    17641 ctcaggccac acttttcagg tggccttttt taataatgcc agttactgtt ttcccgtcta
    17701 catacctaag ggaataacat gtatcacgac atcagctatc tgctctcccg cctgatcaac
    17761 ggcccgctgt ccctgcgcca gatttacttt gccagcagta acggcccggt gcccgatctt
    17821 gcgtatcagg tcgattttcc acggctggaa attgtgctgg aaggtgagtt tgttgatacc
    17881 ggcgctggag caacgttagt tcccggcgat gtgctgtacg ttgccgctgg tggctggaat
    17941 ttcccacaat ggaaaacacc cgctaccacc tttagcgtgc tgtttggcaa atagcaactc
    18001 ggcttcagcg tcgtgcaatg ggatggcaaa caatatcaaa atctggcgaa gcaacacgtc
    18061 gcccgacgcg gcccacgtat aggttctttt ctgctacaaa cgctcaatga aatgcaaatg
    18121 cagccgcagg agcagcaaac ggcaaggctt atcgtagcca gcctgcttag ccactgccgc
    18181 gatttgctcg gcagccaaat ccagaccgcc tcacgcagcc aggcactatt tgaagctatt
    18241 cgcgattata tcgacgaacg ctatgcctcc gcgcttaccc gcgaatctgt cgcacaggca
    18301 ttctatattt caccaaacta tctctcgcac ctgtttcaaa aaacgggggc cattggtttt
    18361 aacgaatacc tgaatcacac gcgactggag cacgctaaga cgttattgaa aggctatgac
    18421 ctgaaggtaa aagaagtggc gcacgcctgc ggctttgtcg acagcaacta cttctgccgt
    18481 ctgtttcgta aaaacaccga acgctcgccg tcggaatatc gccggcagta ccacagccaa
    18541 ctgacagaaa aaccgactac tccagaataa gatgggtttg ctgcggcgca gaaagcactt
    18601 tgcgcaccgc gctcattacc cgctgcggct cacgcaggaa tgcgtagatg ctgcattgca
    18661 catagcggca atgttcaaat cgctcggcac cggcaagctc gatatccgta atcaacagag
    18721 caacatccgc ccgacggata tcctcgtccg ctaaacgatt ctccgttccc agcgcgccct
    18781 gagtttcaat gctgacgccc cacttctcta actggcacaa cttttccagc cgttccgccg
    18841 ccatataagt atgcgccacg ccgcttacgc aggcggttac tgccaccagg tatgccattt
    18901 taacctccca cggtaacctg aaatccggcc cgttctgcca tttcgcgcat cgttgccaca
    18961 tcggctgatg acggcgcagc aacatccttc atcgaccatg ttttccccag caggcggtat
    19021 ttcggctcgc cgtactgatg aaacggcaac agatggatct gcctgatatt cagcgggatc
    19081 agcacgtcca gcgcctgctg catattctcc cggctgagtg tgaaaccggg gatcagcggc
    19141 aaacgcggga tcacgttgac accctcactc accagcaaac gcaggttctc cagtacgcgt
    19201 ggcaggttca tcttcaccac atcccgcgcc tgagtcgcgt ccataatttt taaatcgaac
    19261 aacacttcat cgcacaattt cgccagcggt aacagcttgc tgactggtgc gtctccggca
    19321 gtttcaatgg cacatgagac accccacagc cgcagtcgct gtaaaaaacg ggtagcaaac
    19381 tccgcctgca ttaacacttc gccgccagaa agcgtgacgc cgccgccgga cgtgcgaaaa
    19441 aaaatgtcat ctttcatcac ttcccgttcc agagcgtcaa ggctgatatc gcgaccaatc
    19501 cgttcaaacg ccccggaggg gcattcatcc gcatcacgca aacatttcgc acagtgcaga
    19561 catttcgcct ctctgcgtac cgtctggatt ttgccggaga tcgactccgg attagcacac
    19621 cacgggcaaa gatgcggaca gcctttaaaa aagaccaccg tacgaatgcc ctcgccgtca
    19681 ttcagtgaat aacgctgaat gttgaaaatg cgcgccacat cattgcggcg cgtttccaca
    19741 acgttacagc tgatgcgctg tccggcggat gatgtcatcc tggatctcct tcgacagttc
    19801 gacaaagaag gcgctgtatc cggcaacgcg caccaccagc ccggcataat cttgtgggcg
    19861 ctgttgcgct tcccacaacg tgtcggcgtt caccacgtta aactgaatat gctgcaactt
    19921 aagctgggta aacgcccgta agaagtcggc cagtttgcgt aatcccgctt caccttccag
    19981 ggtcgccgga gtgaatttca cgttcagcaa cgtaccgtta gacagcagcg tattatcgag
    20041 cttactgact gacttcagta ccgctgttgg cccttgttcg tcctggccca gcataggtga
    20101 caagccgccg tctgccagct gttctccggc aaaacgaccg tctggcgtcg cgccaaccac
    20161 cgatcccaac gggacgtgag cagaaacggt atacgatccc ggcgtgaagt aaccaccgcg
    20221 cgggttctgg tatttttcca cttctttgca gtagtggcgc aacagttcgg cgctaatgtt
    20281 atccacctcg tcgatatcgt taccatattt ctcaaagcgg ttaattaagc gagcgcggac
    20341 tttttcgcct tctggcgttg caaagttggc ttttaatacc gacagcaatt cgtcaaaact
    20401 taaacgctgt tgctcaaaaa ccatcccttt caacgcatgg agagaatcgc tcaggttggc
    20461 gataccgatc ccctgtacgc cggagaagtt ataacgcgcg ccgccatcgg taatatcgcg
    20521 acctttttcc agacaatcgc tgataaaaga cgagagcagc ggtacaggtg cccagtcgcg
    20581 atggccgata tcacaaatat tgctgccctc aaccatcagg gtgatgtagt ggctgatctt
    20641 ggcgcggatc tgctccagta aaccttcata agtcagcgca gcattgcctt cattttcatg
    20701 caggcagatt tccatcactt tcagcagatt aaacatcgcg atgtcatgca agccgtaggt
    20761 tctgccggga atagataatt ccacacagcc cactacggaa tagtcgcgcg catcttccag
    20821 cgaaacgcca cggttgagga acgctggtac caccacttca tcgttaaaga tttgcggaat
    20881 accggtgccg aggcgaatgg tttcggcggt tttcatcagg aatggcgtgt cgatcaaggc
    20941 gttagtgcgc acgccgaggt tcggttgcgg taattgcacg ctttgatagg cgtcaaggca
    21001 aaggaacgaa agcacgttca ccgcgctacg tccgttctcg gttaacccgc cgagcagtgc
    21061 ggtatagccg gtcgggaaac ctgcgaaata acgcgcgctg ctggtggagc gcaacagcac
    21121 gatgtcgttg catttcaccc ataaagattc gagcagttct ttcaggaacg ccggatcttc
    21181 gccctgggtt aaagatgcct gatagaacgg caacatatac tggtcgaagc gccctaaaga
    21241 cagcgaactg gcgttggatt cgtattgcag aatgatgttc atgtaccaga ataactggca
    21301 cgcctgccag aacgtctgcg gcttatgttc ggcgttatgg cgagagatct ccgcaatagt
    21361 cagcagttct tcgcgacgct gggcatctgt gcagtttgcc gccatcgttt ccgccagtac
    21421 ggcgtaacgc aaaatgtgtt tctgcgaggc ttccagcagt aacagcgctg cctgataaaa
    21481 gtgattctcc ggctgttgct gacaatgttg ctgcatctgt gccaccaact cccccagccc
    21541 gtgattcaac aggcgtgggt aatcaataat aatgtgcccc tggcctttat ccgtctggtt
    21601 aatgctgaaa atctgcgtgc tggtcgcggc ttttacttca tccgtcatct gcccgttgat
    21661 gaaatctttc atcgaacgtt tttcccagta cgggaacaac tcttcacgat agatacgttt
    21721 atcttcttcg ctgatagcaa agcggtcctg cggacgcgtc gggaattgat ccagctcttt
    21781 cagcagccag taagggtcca tttccggcga cataatcccg gcgcgcggtt ttacggtgcg
    21841 gttaccggca atcagttctt catcacgaat cgaaatttca acatgttcaa ggatatacgc
    21901 tgttgctttc gcccggcgca atatcaccgg ttcgccttcg gtttgccgat ggctggcggt
    21961 ataaagcagc gcccgctcca gcgagatttc acgggtattg gcaaacagtg cagttttgag
    22021 gcgagagata cgattcgtca tgaggaactc ctgtgggaaa gcgaacccgc ccttgcgagc
    22081 gggagaagaa cttaagcggt ttgcgccagg tgagcttcaa ttttgctcat aatggcgtca
    22141 gcacgtttta ctgcatcgct gatgttgacg cgcacgatgg tcttgccagc aaaacgctct
    22201 tcaaacttga tgccgatatc tttggtcaga atcaccatat cagcgctcgc cacatcttcc
    22261 gcagtcagtt cattttccag accaattgac ccctgggttt ctactttcac ttcccagcct
    22321 ttcgctttcg cggcactttc cagcgcctct gctgccatat aggtatgggc aacacctgaa
    22381 ggacatgcgg ttactgcaat aattttcgtc atggctcgtt cctcaattaa ttaatttcaa
    22441 aatccaaatc caggtcgtct tctttttcat cagtcgaaga cccattttta cgcgccagac
    22501 ttttcagcac gttcacacaa acagccgtca ccactgctcc gacagccact gctgcgatat
    22561 aacccagctt gccttcaacc accggcagca caatcagacc accccagcct gcatagcact
    22621 gcgcaccgac cagcgccgca gttactgcac cacaaactga accgaccatg atggaaggaa
    22681 tgacacgcag cggatcggca gcggcgaaag gaatcgcccc ttcagtaacg ccaacacagc
    22741 ccatcaccag tgccgctttg ccggtttcgc gctcttctgc ggagaaattt ttacgaccaa
    22801 tcagcgtcgc cagccccatc cccagcggcg ggatacaaat acccacggca gcgatgacca
    22861 ccacggtata aacaccctga gcaacgcaaa tcagcatgaa ggcataggcc actttgttaa
    22921 ccggaccgcc catatcgaac gccagcatca gacccatgat caccgccagc ataacaatgc
    22981 tgccctgctg catcccttga agccactgag tcaggctgtt ggtcaacgcc cctacaggct
    23041 cgcccaagcc ccacatcatg atgcctgcgg taatcagtgt gccgacgata ggaataatga
    23101 agataggcat caccgagcgc agaactttat gcaccggaat tttcttcagg taatgcacca
    23161 cgatgccgcc gataatcccg gcgatcagtg caccaaagaa gcccgcacca aagctgttac
    23221 caacctaggc accgatagcg cacggagcca gcgcagaacg ctctgcaatg gagtaaccaa
    23281 tgtaagcggc gaggaaaggc accatcagcg tcaaacctgc aacgccgata tcaaacagtt
    23341 ttttcaaatt cggatcggct acggcatccg gcactgcgcc tttgccatac aacatgacgg
    23401 aaaccgccag caaaataccg cccgatacca cgaagggaat catgtgtgaa acgcccgtca
    23461 ttaaatgctg acgggtattt ttcaggatct gcaccaactc attcataagc tgctcccggg
    23521 cttgcgaaag cccatgtcca tatttttgat ggaggaaaca ataggcaatc gcaggcggag
    23581 caaacagtgg ataaaaaggc catttactgg acttttgtaa tatcagtaca aaaatgcgat
    23641 ccgcctcata acttgcgata aaccggaagc atgccgcaaa acggcgtctt gtgagacgcg
    23701 tcgcaaattg acggttacat tacatttgtc cagcttttgg cagatttgtc acatggcagg
    23761 ccgttgccgt gcgctcttat cctgtaaaca gaaaaccgta ccgggagaga ggcaatggcc
    23821 ctgattgtgg aatttatttg tgagctacct aacggcgtac atgcgcgtcc ggcaagccac
    23881 gttgaaacgc tgtgtaatac tttttcatca caaattgagt ggcataacct gcgcactgac
    23941 cgcaagggca acgccaaaag cgcccttgcg ctgattggca ccgatacgct ggcgggcgat
    24001 aactgccagt tactgatttc cggggccgac gaacaggaag cgcaccagcg tttaagccaa
    24061 tggctgcgcg atgaattccc ccactgcgat gcgccgctgg cggaagttaa atctgacgaa
    24121 ctggaaccac tgccggtttc actgaccaat ctgaatccgc aaattatccg cgcccgcacc
    24181 gtgtgcagcg gtagtgcagg cggcattctg acgccgatct cttctttaga tctcaatgcg
    24241 ctgagtaatc ttcccgcagc caaagacgtt gacgccgagc aatccgcact ggaaaatggc
    24301 ctgacgctgg tactgaaaaa cattgagttt cgtctgctgg atagcgacgg tgctaccagc
    24361 gcgatactgg aagctcaccg atccctggct ggcgatacat ctttacgtca gcacttactg
    24421 gcaggcgtca gcgagggatt aagctgtgcc gaagcgattg tcgccagtgc gaatcacttt
    24481 tgcgaagagt tcgcccgttc cagcagcagc tacctgcaag aacgtgccct ggacgtacgc
    24541 gacgtctgct tccagttact ccagcaaatc tacggtgagc aacgcttccc ggcaccgggc
    24601 aaactgacgc agcccgccat ttgtatggct gatgaactga ctcccagcca gttcctcgaa
    24661 ctggataaaa atcacctcaa aggtctgtta ctgaaaagtg gcggcaccac ctcacatacc
    24721 gtaattcttg cccgttcgtt caacattccg acactggttg gtgtagatat tgatgccctt
    24781 actccgtggc agcatcaaac gatttatatc gacggcaacg ccggggcgat tgtggttgag
    24841 ccaggggaag ccgtggcccg ttattatcag caagaagccc gcgtacagga cgcccttcgt
    24901 gagcaacagc gtgtctggct gacccaacaa gcccgtaccg ctgacggtat ccgcattgaa
    24961 attgccgcta acatcgctca ctccgtggaa gcgcaggccg cattcggcaa tggtgcggaa
    25021 ggcgttggtt tgttccgcac tgaaatgctc tatatggatc gcaccagtgc accgggcgaa
    25081 agcgagctgt acaacatttt ttgtcaggcg ctggagtctg ccaacggacg cagcattatt
    25141 gtgcgcacta tggacattgg cggcgacaaa cccgttgatt atctgaacat tccggcagaa
    25201 gctaacccgt tcctcggtta tcgcgctgtg cgtatttatg aagaatacgc ctcgctgttc
    25261 accacacaac tacagtcgat cctgcgcgcc tccgctcacg gcagcctgaa aatcatgatc
    25321 ccgatgatct cctcaatgga agagatctta tgggtgaaag aaaaactggc ggaagccaaa
    25381 cagcaactgc gtaacgaaca cattccgttt gatgagaaga tccagcttgg cattatgctg
    25441 gaagtaccgt cggtgatgtt catcatcgat caatgctgcg aagagattga tttctttaat
    25501 attggtagta atgacctgac gcaatatctg ctggcagtgg atcgcgataa cgctaaggtt
    25561 actcgtcact acaacagcct gaatccggca ttcttgcggg cgctcgatta cgccgtgcag
    25621 gcggtgcatc gccagggcaa atggattggt ctgtgcggtg agctgggagc gaaaggttcc
    25681 gtgctgccgt tgctggtcgg cttagggctg gatgaactca gcatgagcgc accatcaatt
    25741 ccggcggcga aagcgcggat ggcgcaactt gatagccttg agtgccgcaa gttgctcaac
    25801 caggcaatgg cctgccgtac ttcgctggaa gtggaacacc tgctggcgca attccgcatg
    25861 acccaacagg acgcaccgct ggtcaccgcc gagtgcatca cgctggaaag tgactggcgc
    25921 agcaaagaag aagtgctcaa aggcatgacc gataacctgc tgctggcggg ccgctgccgc
    25981 tatccgcgta aactggaagc cgacttatgg gcgcgcgagg ccgttttctc taccggtctg
    26041 ggctttagtt ttgccattcc acacagcaaa tcagaacaca ttgagcaatc caccatcagc
    26101 gtggcgcgtc tgcaagcgcc ggtgcgctgg ggcgatgatg aagcgcaatt catcattatg
    26161 ttaaccctga acaaacacgc tgcgggcgat cagcacatgc gcattttctc gcgcctcgct
    26221 cgccgcatca tgcacgaaga attccgtaac gcgctggtta acgccgcctc tgccgacgct
    26281 atcgccagcc tgctgcaaca tgaactggaa ctgtaaaagg aaacatcatg gaactgtatc
    26341 tggacaccgc taacgtcaca gaagtcgaac gtctggcacg catattcccc attgccgggg
    26401 tgacaactaa cccgagcatt atcgctgcca gcaaggagtc catctgggaa attctgccgc
    26461 gtctgcaaaa agcgattggt gatgagggca ttctgtttgc tcagactatg agtcgtgacg
    26521 cgcagggtat ggtggaagaa gcgaagcgcc tgcgcgacgc cattccgggc attgtggtga
    26581 aaatcccggt gacttccgaa ggtctggccg ccattaagat gctgaaaaaa gagggtatta
    26641 ctacgcttgg caccgcagtg tacagtgctg cacaagggtt actggccgcg ctggcagggg
    26701 caaaatacgt tgctccgtat gttaaccgcg tagatgccca gggcggggac ggcattcgta
    26761 cggttcagga gctgcaagcg ctgttagaaa tgcacgcacc agaaagcatg gtgctggcgg
    26821 ccagctttaa aacgccgcgt caggcgctgg actgtttact ggcaggatgt gaatccatca
    26881 ccctgccctt agatgtagcg caacaaatgc tcaacacccc tgcggtagag tcagctatag
    26941 agaagttcga acacgactgg aatgccgcat ttggcactac tcatctctaa aggagcaatt
    27001 atggaccgca ttattcaatc accgggtaaa tacatccagg gcgctgatgt gattaatcgt
    27061 ctgggcgaat acctgaagcc gctggcagaa cgctggttag tggtgggtga caaatttgtt
    27121 ttaggttttg ctcaatccac tgtcgagaaa agctttaaag atgctggact ggtagtagaa
    27181 attgcgccgt ttggcggtga atgttcgcaa aatgagatcg atcgtctgcg tggcatcgcg
    27241 gagactgcgc agtgtggcgc aattctcggt atcggtggcg gaaaaaccct cgatactgcc
    27301 aaagcactgg cacatttcat gggtgttccg gtagcgatcg caccgactat cgcctctacc
    27361 gatgcaccgt gcagcgcatt gtctgttatc tacaccgatg agggtgagtt tgaccgctat
    27421 ctactgttgc caaataaccc gaatatggtc attgtcgaca ccaaaatcgt cgctggcgct
    27481 cctgcacgtc tgttagcggc gggtatcggc gatgcgctgg caacctggtt tgaagcacgc
    27541 gcctgttccc gtagcggcgc taccactatg gcgggcggca agtgcaccca ggcggcgctg
    27601 gcactggcag aactgtgcta caacactctg ctggaagaag gcgaaaaagc gatgcttgcc
    27661 gccgaacagc atgtagtaac ccctgcgctg gaacgcgtga ttgaagcgaa cacctattta
    27721 agcggtgttg gttttgaaag cggcggactg gcggcggctc atgcggtgca taacggcctg
    27781 accgctatcc cggacgcgca tcactattat cacggtgaaa aagtggcatt cggtacgctg
    27841 acgcagctgg tactggaaaa cgcgccggtt gaggaaatcg aaaccgtagc tgcacttagc
    27901 catgcggtag gtttgccaat aactctcgct caactggata ttaaagaaga tgtcccggcg
    27961 aaaatgcgaa ttgtggcaga agcggcatgt gcagaaggtg aaaccatcca caacatgcct
    28021 ggcggcgcga cgccagatca ggtatacgcc actctgctgg tagccgacca gtacggtcag
    28081 cgtttcctgc aagagtggga ataacctact ccaaactccc ggcttgtccg ggagtttgaa
    28141 cgcaaaattg cctgatgcgc tacgcttatc aggcctacgc aatctctgca atatattgaa
    28201 tttgcgtgct ttttaggcca gataaggcgt tcacgccgca tccggcactc tgtgccagta
    28261 atctgaaact cctacgttgt tcaggagttt tttatccgct tctggacatt ttctctacag
    28321 aacaatcgtt agcccggaag gtcgaatctg tgactcttat tttcacggac gaaccagatg
    28381 aaagcttcac tggcgctgct cagcctgcta acggcattta ccagccactc cttaaaatct
    28441 cccgccgttc caccaaccgt ggtacaaatc caggccaata ccaaccttgc catcgcagac
    28501 ggtgccagac agcaaatcgg caacacgcta ttttacgatc cggcgtatgt gcggcttacc
    28561 tatcctggcg gtgatgtccc gcaagaacgc ggtgtatgtt ccgatgtggt gatccgtgca
    28621 ttgcgcagcc agaaggtcga tttgcagaaa ctggttcacg aagatatggc gaagaatttt
    28681 gccgagtacc cgcaaaaatg gaagttaaag cgcccggaca gcaacatcga tcaccgtcgg
    28741 gtgcctaatc tggaaacctg gtttagccgc cacaacaaaa cacgccccat cagtaaaaat
    28801 gccggtgact atcaagcggg cgatattgtc tcctggcgat tagataacgg gctggcgcat
    28861 attggggtgg tgtcagatgg cttcgcccgc gacggtacgc cactggtgat acataacatt
    28921 ggcgcaggcg cgcaggaaga agatgtgctg tttagctggc ggatggtggg gcattatcgt
    28981 tattttgtta aataagcgat cgccccacat gaagaaaaaa ttcagatgct ttttacactg
    29041 acagcttctt ttttcttacg gctcaccagc gccagtgcca gcacaatcag cacaatcagc
    29101 acaataccgc taccttcaac ggcccccgga ttctcaccga gcagccacca ggaaaagagt
    29161 acgccgcaaa cgggaacggc cagcgtgctt aagctggcaa tactggcagg caagtttttc
    29221 aatacaaaca accataagct ccacgccagc gccgtcgcca gaatcgcact gtaggccagc
    29281 gcccagaaca cggtgggctg ccagtcaatt tcacgttgcg gcaccagtaa agcgaccaca
    29341 ctcatcacca gcgccgcata gagcatctgc caggatgtta acgataataa atccacgcgc
    29401 ggatgacggg tgtataggcg tttagcaaca atcgcgctcg ccccccaact aacaccggag
    29461 aggattgcca gcatggcact tttcatcgaa gagaaatcga gttgccacgg ctgcaacacc
    29521 aaaaataagc cgaaagcggc aatcagaatc gcgaaatatt gcccacgtcg caggcgttca
    29581 ccgagaaaca acgcggcgaa aatcaccacc cagaacggca tggtatagct caggatcgcc
    29641 accttccccg cacctccgct gaccaacgcc cactgcgcca gaccaaccat cccgcaggtt
    29701 tgtaacaggg caatggctaa ggtgtattta aacggcgtcg ggtgcattcc gcgaccacgt
    29761 aataaaagga cgatgaataa aacgagagcg ccgaaaatgc agcgtaaggc ggtaaagtcg
    29821 aaggcaccga tgtaactggt gacttgcttc atgaaaatcc agctataact ccagataagt
    29881 gtgagcacaa ccaggccact gattgccagt gggttgctct ttcctgcggc agacatgaga
    29941 gatccagtgt gtagttttcc tgtggacact atacgccggt aaagaaactt cagcgactgc
    30001 ctgaaagaca gtcactgaag aaggtcagat tacagcaggt cgaaacggtc gaggttcatc
    30061 actttcaccc atgccgctac gaagtcttta acaaacttct cgtgggcatc gctgctggcg
    30121 taaacttccg ctaccgcacg caggacagag ttagaaccaa ataccagatc cgcacggctg
    30181 gctgtgtatt tcacttcgcc ggtttcgcgg tcacgtcctt cgaacagctc tttcgattcg
    30241 tcagtcgctt tccactcgta acgcatatcc agcaagttca cgaagaagtc attgctcaat
    30301 acgccaacgc ggtcagtgaa gacgccgttt ttgctgctat cgaagttggc acccagtaca
    30361 cgcatcccgc ccaccagcgc agtcatttcc ggcgcggtca gcgtcagttg ctgtgctttg
    30421 tcgatcagca gtgactcggt ggtggaaacg tccagacgag cgcgatagtt acggaaaccg
    30481 tcagcaattg gctccagcag ctcaaacatc tcaatgtcag tctgatcctg acgcgcatca
    30541 acgcgacccg gcgcaaacgg tacatgaatg ctcaaacctg cggcgcttgc ggctttctca
    30601 acaccaacca caccagccag cacgatgata tccgccagcg aggctttacc agactctttc
    30661 tggattttct ccagaacagg cagagcacga acggctgcgg cgttcacatc ccagtcgcgc
    30721 tgcggcatta atgccagacg cgcaccgttg gcaccaccgc gtttgtcgcc accacggaag
    30781 gtagaagcag atgcccaggc caccgatacc agctcactaa cagacagacc agaatccgca
    30841 atcgcgaatt tcagatcgat aatgtcctgc tcggtcgggt tgtagatcgg ctgcggcagc
    30901 ggatcttgcc agatcagatc ttctttcggc acttccggcc cgatgtagcg agatttcggc
    30961 cccatatccc tgtgcgtcag tttgaaccag gcacgggcaa aggcttcgtt gaacgcctgc
    31021 ggatcgttga ggaaacgacg agagatcttc tcgaactcag gatcaaaacg cagcgtcagg
    31081 tcggtcacca gcattgtcgg tttacgtttc ttcgacggat cgaacggatc cgggataatt
    31141 tccggtgcgt ctaccgcgtc gaactggatt gctccagccg gactgcgggt ctgtacccac
    31201 tcatatttga acaggttctc gaagaaatag ttgctccact gggtcggcgt ctgggtccag
    31261 acaacttcca gaccagaggt aatggcatct gcgccaacgc cgctgccgta agtgctcgcc
    31321 cagcctaaac cttgttcttc aatcggtgca gcttctggat caggacctac atttgatgtc
    31381 ggaccggcac cgtgagtttt acccagcgta tgaccacccg caatcagcgc cacggtttct
    31441 tcgtcgttca tgcccatgtt gccgaaggtc gcacggatag ctgctgccgc agaaagcggt
    31501 tcgccgctgt gatccgggcc ttccgggtta acgtaaatca gacccatctc ggttgcaccc
    31561 agcggtgctt tcgccagcgc ttccggatga cggtgagtca gccaggcttt ttcatcaccc
    31621 cagttaacat ccagatccgg ttcccagacg tcttcacgac cggcaccaaa accgaaggta
    31681 cggaagccgg agttttccag cgccacgtta cctgcgagga taaacaggtc ggcccaggag
    31741 attttctgac catatttctg tttgattggc cacaacaggc gacgcgcttt atcgaggctt
    31801 acgttatccg gccaggagtt cagcggtgca aaacgttgct gaccacgacc cgcgccgccg
    31861 cgtccatcga ttgaacggta agtacctgcg ccgtgccagg ccatacgaat aaacagaccg
    31921 gcgtagctgc cccagtcggc tggccaccac ggctgagatt ctgtcagcag ggctttcaga
    31981 tcttttttca ggccgtagta atctaatttg ctgaattctt tgcggtagtc aaagtcctca
    32041 cccagcgggt tagaacgatt agaatgttgg tttaacaggt caacacggag ttgatttggc
    32101 caccagtcgc gagtggttgt gcccgccccc gcgctctggt cgtgaccgcc ctgatggaac
    32161 gggcatttgc cagtggctgt cgtgttatgg atatcgtctg acgtgctcat caatgtgctc
    32221 ccctctacag tgttaccgtt acgatacaca gcgttagaga gaagttataa ttgaattaat
    32281 ccacggatgc gatagttgag atcttacata ttgttggtta aagagatgta ggtcaaattg
    32341 atcgtaatta agcttttttg attatgtccg aattcggaca aatgctttat aaaaaagggt
    32401 tttagcttca tatccttcaa gtaatgaggg agaaaacaag gctgacaacc ttattttccc
    32461 gccctcattt cgaggcagca ttttgtgctc tgtttaaaat ttgtgatcac tgtgtgattt
    32521 tcacaaaagc cacactattt ataaaccagg tcgaacaccc agcgtatggc aaatcgcgta
    32581 actcatttca gcgcggttaa gcgtatagaa gtggaaatct ttcactcctt cacggcttaa
    32641 aatcttcacc atatccatgg caatattcgc gcccaccagt ttgcgggttt cggcatcatc
    32701 atctaggccg tcgaacattt gcgccatcca cgccggaata cgcacgttgg tcatatcggc
    32761 aaatttcttc gcctgtttaa agttagatac cggcaaaatt cccggaataa tttccacatc
    32821 aatgcccgcc gatacacagc ggtcacgaaa acgcaggtag ctttcgacat cgaagaagaa
    32881 ctgagtaatc gcgcggttgg ctccggcatc gactttacgt ttcagattaa gcaaatccgc
    32941 ctgagcgctt tttgcttccg ggtgaacttc cggatacgcc gccacggaga tatcgaaatc
    33001 tgccacttct tttaatagcg tcaccaggtc agaagcatac atttctggct taccacttcc
    33061 cggcggcaga tcgccacgca gcgccacgat atgacgaata ccgttattcc agtagtcgcg
    33121 tgcaatggtg cgcaactcgt cgggcgtcgc atcaatgcaa gtaagatgcg gtgccgcttc
    33181 cagaccagtg cgatctttaa tgcctttaat aatgctgtgc gtacggtcgc gctcgccgga
    33241 gttcgcgcca taggtcaccg atacaaactt cggtttcagg ctgctaaggc gatcgatgga
    33301 gttccacagg gtctgctcca tttcactggt acgcggcggg aaaaactcga acgaaacgtt
    33361 aatctgcccc tggacttctg ccaggctctg attcagggca tcccgctggc tggcgtgaaa
    33421 aaagctcata ccttacctca tcaatcgctt gtagttatat gttgtgctgt gcacatctat
    33481 ccgtttagac gtccagatgt aaagatgaag gaaaagccga agggcgtcaa ccgaaaaatg
    33541 accaatgatg gtgaggaaaa atcagggaag atgaaaaaac ttcaggatgg taagaaaaag
    33601 aaaatccggt atgcaaagca aaccggactg caaatataaa ctaaccatgt acttattgct
    33661 tcttgccgga ttcgtcgtaa acgcttaatc cggcctaatc ctatgataat tcaatatatt
    33721 tcattagaaa ccataaaccc gaaaacatga gtaccgggca ttattaaatt tctgaaatta
    33781 caacaactgt gccagccggt tgatatccga ctgaatcgcc ccggcggtga cgtcgcgccc
    33841 cgcgccaggc ccacggatca ccagcgggtt gtcgcgatac cagcggcttt cgatggcaaa
    33901 gacgttatcg cacggcagca gtgatgccag cggatggtct tcacgcaccg cctccacgcc
    33961 cacacgcgct ttgccgttgg catcgaaacg caccacgtag cgcagcacca gccccatttc
    34021 gcgggccgct tccagccgtt gcaccatctg ctcgttaagt tcatcgccat tttcaaagaa
    34081 atggtcgatg ctgccgcctt cgcaatgagc aggcaccagc gattccacac gtacctggtc
    34141 cggttcaatg ttgtaacccg cttcacgcgc cagaattacc agcttgcgca ttacgtcttt
    34201 gccggagagg tcgtcacgcg gatcaggctc ggttaagccc tgctgccacg cctgatccac
    34261 cagctcggta aacggcacgc taccgtcgaa ttgcaggaac agccaggaga gcgtgccgga
    34321 gaagatcccg ctgatcgaca aaatagtatc gccgctgtcg atcagatcgc gcacggtgtg
    34381 gttgatcggc aagcccgcac cgacggtggc attgtacagc cagtgacgcc cggttttttc
    34441 gaaggcgtcg tggatctggc gatatttatt gctgtcgctg gctcccgcca gtttgttggc
    34501 gctgataacg tggaaaccgt ggctggcgaa atcaagatac tgatcagcaa gctgctggct
    34561 ggcggtaacg tccagcacca ctaaatcatc atacggatgg gcgcgcatcc acaggaacaa
    34621 cgactcttca tcctgctcaa ccgcttcatc gttgaagaag gctaacgcgc ggctggcgtc
    34681 cagcccgtca tagctcaaca ggctgcggcg gctgtccacc acacctgcca gcacaaactc
    34741 aaagccggta cgtgccgaaa gcgtgctctg ctcacgggcg aacagttcca gccaacggga
    34801 accgatattg cccttaccga acaataccag gccgatgcgt ttttctgcgc ggaagacgga
    34861 ctgatgcagc ccctgaatca ggctttcggt cgggccggtg cgcagtactg ccaccaggct
    34921 gatgccgtca tcggactgcc aggtaaattc gaccggctgg cctttcagtt gctgccagaa
    34981 gcggtggcaa tgcagcgggt tacgggtgac gcctgcaccg accatcgcca ccagcgccag
    35041 cccctgacgc aggcgcagtt cgccaggtaa tcccgcttcg tcgaggattt tcagcgcact
    35101 gtcggccact tctgaggtgt agcaaaattg cagcaactgg cgatcgttat gtacgccaac
    35161 cgccagcggg cgtacctgcg cgcgtttcag gatttggtcg atctctttat gcaccagttt
    35221 gaaatcctga ctggcgggca cctgaaactc aatcaaacag acatcatcgt ggctggtgac
    35281 aatacgcgca ccagtaccgg aggccagcac gcgttcaatg cgcgtggaac cttgatccgg
    35341 cgtgtagcta cagcgcagtt gcaggtcgat ttcgctgcca gaaaccggct gtaaagtacg
    35401 ggcgtgaaga acgggagccg ccaggcgcgc cagttcgctg gcctcatcca gacgcagcaa
    35461 cggcagcagg caggcatctt tcactttacg cgggtcggca ctgtataccc cggcgacgtc
    35521 gctccagatg gttacgcgag aaacacccgc cagcgcaccg atttgtgtcg cggaatagtc
    35581 ggaaccgtta cgccccagca gcaccgtttc accggcgttg ttgcggctga taaatccggt
    35641 caccaccaga cgtttgcccg gatgttgcac cagcagctgt tgcagcaacg ggtaagaaag
    35701 cccttcatca acctgcggtt gtgtggcgcg ttcagcgcgt aaaaactcgc gggcatcaag
    35761 ccaggccgct ggcagccctt gttgattaag taccgcagac atcaggcgtg ccgaccatac
    35821 ttccccgtgg cccaccactt ccgcatacac tgcgtcgtta ataccgctgt cgagcagcgc
    35881 cgctaggcgc tcaaggtcgc tgacaaaagc gctaatgagg ctatcagctt cttcagcggg
    35941 tagcagaccg ctaatcagat cgcactgata gcgacgctgc gtttgttgaa cctgatgcgc
    36001 agagagacga tcggtctggc ttagtttcaa ccagttaatc aactggttag tggtgctacc
    36061 ggcggcggaa accaccatca tatcgtcagg ctgagagtac tccgccataa tgcccgcaac
    36121 acgcaaataa cacttcacat cagccagact actgccacca aatttatgca gttgacgacc
    36181 tttcgcccct gcctgcgcaa tcacactcat ttttacccct tgtttgcagc ccggaagcca
    36241 ttttccaggt cggcaattaa atcttcgcca tcttcaatac cggtggagat acgcagcagc
    36301 gtctcggaga tcccggcggc agcacgcgct tctggtgcca tgcctgcatg tgtcatggtt
    36361 gcggcgtgag agattaaact ttccactccc cctaatgatt ccgccagcgt aaacaacgac
    36421 agcccgccca ggaaacgacg cagcgtctgc tcatctccat ccagttcaaa actcaacatt
    36481 gcgccaaagc ctttttgctg gcgcgcggca atttcatgcc cctgattttc cggcagcgac
    36541 gggtgataca gttttttcac caacggctgg gtttgcagat atttcacaat cgcctgcgcg
    36601 ttgcgctggg ccagctccat acgcggcacc agcgttcgca acccgcgtag cagcagatag
    36661 ctgtcaaacg cgccgcccgt cacgccaata ttgtttgtcc accaggcaag ttcagtgaca
    36721 acgtccgggt ctttagcaat caccacgcca gccaccacgt cagagtgacc gttcagatat
    36781 ttcgtacatg aatgcaacac cagatcggca cccaatgcca gcggattttg taatgccggg
    36841 cttaagaagg tgttatccac cacgctcacc gccccgactt cccttgccag atggcagatt
    36901 ttcgcaatat ccacgacgcg taacaatgga ttacttgggc tttctaccag taccagtttg
    36961 ggtttttctg ccagcgctgc ccgtaatgcc tgttcatcgc cttgatcaac aaacaacacg
    37021 cgatagcaac cgcgtttcac cagactgtcg aacaggcgat agctaccgcc gtagcagtcg
    37081 tgcggcgcaa ccagcagatc gccaggtttc aaaaagacgg tcgtgaccaa gtgaatcgcg
    37141 gacatgccgg tattagtaag tactgcgcca gcaccgcctt ccagttctgc cagcgcacgc
    37201 tgaaccacat cgcgcgttgg gttgccgcga cgcgagtaat catgcgcgcg cggttcatta
    37261 aatccggtaa agttataggt gctggaaaga tggatgggag ggacaacgca accatactgt
    37321 tcgtcgtcat ttaacccgct acgcactgcg atggtggcct gtttacgcgt catgtgatga
    37381 agtttcctgg gctttgtcgg tgaaatgtca ggcaccagag taaacattgt gttaatggac
    37441 gtcaatacat ctggacatct aaacttcttt gcgtatagat tgagcaaatc ccaaatagcc
    37501 gttaaaatta tatgcattat cacgccgaca ggtgcattac acgatgtcac ggtaacgcct
    37561 gtacggtaaa ctatgcgggt ttacggtcag tacccacata aattgtgtgg tctggtctca
    37621 atttattgac gaagaggatt aagtatctca tggctgaatg gagcggcgaa tatatcagcc
    37681 catacgctga gcacggcaag aagagtgaac aagtcaaaaa gattacggtt tccattcctc
    37741 ttaaggtgtt aaaaatcctc accgatgaac gcacgcgtcg tcaggtgaac aacctgcgtc
    37801 acgctaccaa cagcgagctg ctgtgcgaag cgtttctgca tgcctttacc gggcaacctt
    37861 tgccggatga tgccgatctg cgtaaagagc gcagcgacga aatcccggaa gcggcaaaag
    37921 agatcatgcg tgagatgggg attaacccgg agacgtggga atactaaagc aaaaaagagc
    37981 ggcgcggagt ggaatcgcct gatgcgctac gcttatcagg cctacgtcat attgcaattt
    38041 attgaatttg cacgaacttg taggccggat aaggcgttca cgccgcatcc ggcataaaca
    38101 acgagcacgt tgtctgcgac ccaccgcttt ttatacatgg acgtttaact atgaaaaaca
    38161 ggctgctgat cctcagcctg ctggtttctg tacctgcctt tgcctggcag ccacaaaccg
    38221 gcgacatcat ctttcagatc tctcgctcat cgcaaagtaa agcgatccaa ctggcgaccc
    38281 attccgatta tagccacacc ggtatgctgg tgatacgcaa caaaaagccc tacgtttttg
    38341 aagcggtcgg cccggtgaaa tacaccccgc tcaagcagtg gatcgcccat ggtgaaaagg
    38401 gcaaatacgt tgttcgccgc gttgaaggcg gactgagtgt tgaacaacag caaaaactgg
    38461 cgcaaacggt aaaacgttat ctcggtaaac cgtatgattt cagcttctca tggagcgacg
    38521 atcgccagta ctgttcggaa gtggtgtgga aggtttacca gaacgcgctg ggaatgcgcg
    38581 tgggcgagca gcagaagttg aaagagttcg atctcagcaa cccgctggtc caggctaagc
    38641 tcaaagaacg ctacggcaaa aatattccgc ttgaggaaac ggtagtttca ccacaagccg
    38701 ttttcgacgc gccacaactc accacggttg ccaaagagtg gccgctgttt tcgtggtaat
    38761 ggatgatgaa aaaaataatt cccgccgtag tctgtttgtt gctttgtagt tgcacgacct
    38821 ttccgcaaac tgtcgctccg gtaaacggtg atgcctccaa ttagttgaat taaggatata
    38881 atactcgctt ttaaggttgt ttcatggtca cagttaacct tcattgcccc cgttgccagt
    38941 ccgttcaggt ttaccgtcac gggcagaacc caaaaagaca tgatcgattc cgcggccgtg
    39001 actgtcaccg ggtatttcag ctcagttact gttacgagcc ccgtaaaccg ggagttaaag
    39061 accaaatcgc tgaaatgact ttcaacggtg ccggggttcg cgatactgcc cgtacgctga
    39121 aaatcggcat taatacagtc atccgaactt taaaaaactc tcgccacgaa gaataacgtc
    39181 atccccggtc gctcatgctg atgtggcact catctgcgaa cttagtcagc aatggagctt
    39241 tgtcggcagt aaagcgcgac agcactggct ctggtacgtg tacaacacga aaactggtgg
    39301 tgttctggcc tacacttttg gcccccggac tgacgaaacc tgtcgtgaat tgctggcgct
    39361 gcttaccctt ttaccatcgg catgttgacc actgacgaat ggggtagtta caccagagag
    39421 ttaccgaagg aaaagcatct gactggtaag atttttactc agcgcattga gcgcaacaat
    39481 ctgaccctga gaacccgaat caaacgtctg gcccgcagaa ccatctgttt ctcgcgctct
    39541 gtagaacttc atgaaaaagt catcggtgct tttatcaaaa atatatgttc tactaattgg
    39601 agtcatcacc cttctgatga gctttccttg gatgattacc agactgaata cacagccaaa
    39661 gatttttacc tcattctgct cttttttctc aaatgacata tattatattt tacatcatat
    39721 tcataggcat atgacattcc cccgccccca ttatgtcatt gtgggttggt gttgggcttt
    39781 cataaaaaaa acatcttttt ttgaactagc attaattata tttactttat atattaaaat
    39841 attttctcca tctggaaata ttttagccac acaatataaa acagctgaat ccgaattact
    39901 taaaaatata ttatcattac ccataactcc agccattaaa ttactggaga ctaaagcaag
    39961 gaaataacaa cattgtattg ccttcatttt aattactccc ttgtctgata attgtaactc
    40021 cattcccttt agctttggga ttatatttta gataggtatt atttggtgtt cccaagtaac
    40081 tactgtattc tttttttccc attccattca tataagaatt cgttaaatct ttgcttgaaa
    40141 aatttagact atcataaaca tcattttctt ttgttacttt atttccttta tcgtcagagt
    40201 aaaaaccgtg agtgtgataa tcgcctactc tctctgaacc ttcagggcat tttatatttc
    40261 gcaagtctac actatcatta tcatttgaac ttatcggatt catggggaaa tattcacctt
    40321 gcttcttaca tattagtcca ccatattatt tattctcgtt aattgattct ccattacaca
    40381 ttgccaatgc aaatattcca atatcatcta tattttttga tttaaattca tataatccta
    40441 atggatccat gctattcacc gggctcagcg gatactgata aaaattccat ccccccttca
    40501 gcccaatcgg atcctgagtg atatatcgcc cctgcagcgg gtcataatag cggtggcggt
    40561 tgtaatacag gccggactcc tcatcatact gctgccccgg caggcgaatg agctgctgca
    40621 gatgatgcgg gttctcttca ttcagcaggt tgcccca
//
LOCUS       DADMHC010000009        40042 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.009, whole genome shotgun sequence.
ACCESSION   DADMHC010000009 DADMHC010000000
VERSION     DADMHC010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 40042)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40042)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40042
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.009"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(144..1028)
                     /locus_tag="JNZ57_000380"
     CDS             complement(144..1028)
                     /locus_tag="JNZ57_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-specific channel-forming protein Tsx"
                     /protein_id="HAY8826716.1"
                     /translation="MKKTLLAAGAVLALSSSFTVNAAENDKPQYLSDWWHQSVNVVGS
                     YHTRFGPQIRNDTYLEYEAFAKKDWFDFYGYADAPVFFGGNSDAKGIWNHGSPLFMEI
                     EPRFSIDKLTNTDLNFGPFKEWYFANNYIYDMGRNKNGRQSTWYMGLGTDIDTGLPMS
                     LSMNVYAKYQWQNYGAANENEWDGYRFKIKYFVPITDLWGGQLSYIGFTNFDWGSDLG
                     DDSGNAINGIKTRTNNSIASSHILALNYDHWHYSVVARYWHDGGQWNDDAELNFGNGN
                     FNVRSTGWGGYLVVGYNF"
     gene            complement(1327..1866)
                     /locus_tag="JNZ57_000381"
     CDS             complement(1327..1866)
                     /locus_tag="JNZ57_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3251 domain-containing protein"
                     /protein_id="HAY8826717.1"
                     /translation="MNTNVFRLLLLGSLFSLSACVQQSEVRQMKHSVSTLNQEMTQLN
                     QETVKITQQNRLNAKSSSGGYLLPGAKTPARLESQIGTLRMSLVNITPDTDGTPLTLR
                     IQGESNDPLPAFSGTVEYGQIQGTIDNFQEINVQNQLINAPASVLAPSDVDIPLQLKG
                     ISVDQLGFVRIHDIQPVMQ"
     gene            2017..2466
                     /gene="nrdR"
                     /locus_tag="JNZ57_000382"
     CDS             2017..2466
                     /gene="nrdR"
                     /locus_tag="JNZ57_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017458860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HAY8826718.1"
                     /translation="MHCPFCFAVDTKVIDSRLVGGGSSVRRRRQCLVCNERFTTFEVA
                     ELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGERE
                     VPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED"
     gene            2470..3573
                     /gene="ribD"
                     /locus_tag="JNZ57_000383"
     CDS             2470..3573
                     /gene="ribD"
                     /locus_tag="JNZ57_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HAY8826719.1"
                     /translation="MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQ
                     RAGEPHAEVHALRMAGEKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQD
                     PNPQVAGRGLYRLQQAGIDVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGR
                     TAMASGESQWITSPQARRDVQRLRAQSHAILTSSATVLADDPALTVRWSELDEQTQAL
                     YPQQNLRQPVRIVIDSQNRVTPEHHIVQQPGETWFARTQEDSREWPETVRTLLIPEHK
                     GHLDLVVLMMQLGKQQINSIWVEAGPTLAGALLQAGLVDELIVYIAPKLLGSDARGLC
                     TLPGLEKLADAPQFKFKEIRHVGPDVCLHLVGA"
     gene            3662..4132
                     /gene="ribE"
                     /locus_tag="JNZ57_000384"
     CDS             3662..4132
                     /gene="ribE"
                     /locus_tag="JNZ57_000384"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HAY8826720.1"
                     /translation="MNIIEANVATPDARVAITIARFNNFINDSLLEGAIDALKRIGQV
                     KDENITVVWVPGAYELPLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLA
                     HVAQDSEIPVAFGVLTTESIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA"
     gene            4152..4571
                     /gene="nusB"
                     /locus_tag="JNZ57_000385"
     CDS             4152..4571
                     /gene="nusB"
                     /locus_tag="JNZ57_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HAY8826721.1"
                     /translation="MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVD
                     VLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKV
                     AINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK"
     gene            4649..5626
                     /gene="thiL"
                     /locus_tag="JNZ57_000386"
     CDS             4649..5626
                     /gene="thiL"
                     /locus_tag="JNZ57_000386"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HAY8826722.1"
                     /translation="MACGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQTLAI
                     STDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMGADPAWLTLALTLPDVDEAWLES
                     FSDSLFDLLNYYDMQLIGGDTTRGPLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGT
                     PGDSAAGLAILQNRLQVADAKDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLI
                     SDLGHIVKASDCGARIDLALLPFSDALSRHVEPEQALRWALSGGEDYELCFTVPELNR
                     GALDVALGHLGVPFTCIGQMTADIEGLCFIRDGEPVTLDWKGYDHFATP"
     gene            5604..6122
                     /gene="pgpA"
                     /locus_tag="JNZ57_000387"
     CDS             5604..6122
                     /gene="pgpA"
                     /locus_tag="JNZ57_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HAY8826723.1"
                     /translation="MTILPRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGTMGSLA
                     AIPFWYLMTFLPWQLYSLVVMLGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITL
                     MALPTNDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILY
                     FIGHHWPLGILS"
     gene            complement(6176..7150)
                     /gene="yajO"
                     /locus_tag="JNZ57_000388"
     CDS             complement(6176..7150)
                     /gene="yajO"
                     /locus_tag="JNZ57_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414953.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxyxylulose-5-phosphate synthase YajO"
                     /protein_id="HAY8826724.1"
                     /translation="MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPII
                     KRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSR
                     AQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMH
                     ASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGR
                     LTRPWGETTARLVSDEVGKNLYKESDENDAQIAERLTGVSEELGATRAQVALAWLLSK
                     PGIAAPIIGTSREEQLDELLNAVDITLKPEQIAELETPYKPHPVVGFK"
     gene            complement(7205..9067)
                     /gene="dxs"
                     /locus_tag="JNZ57_000389"
     CDS             complement(7205..9067)
                     /gene="dxs"
                     /locus_tag="JNZ57_000389"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HAY8826725.1"
                     /translation="MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVS
                     RSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKG
                     GLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMA
                     FEAMNHAGDIRPDMLVVLNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSG
                     VPPIKELLKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQ
                     FLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAA
                     KDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIY
                     STFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMT
                     PSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEKLPIGKGIVKRRGEKLAI
                     LNFGTLMPEAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAG
                     SGVNEVLMAHRKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWLA"
     gene            complement(9092..9991)
                     /gene="ispA"
                     /locus_tag="JNZ57_000390"
     CDS             complement(9092..9991)
                     /gene="ispA"
                     /locus_tag="JNZ57_000390"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl diphosphate synthase"
                     /protein_id="HAY8826726.1"
                     /translation="MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGG
                     KRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCH
                     VKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQAL
                     DLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLA
                     FQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQ
                     LAEQSLDTSALEALADYIIQRNK"
     gene            complement(9991..10233)
                     /gene="xseB"
                     /locus_tag="JNZ57_000391"
     CDS             complement(9991..10233)
                     /gene="xseB"
                     /locus_tag="JNZ57_000391"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015571292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HAY8826727.1"
                     /translation="MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQ
                     LARQGQAKLQQAEQRVQILLSDNEDASLTPFTPDNE"
     gene            10439..11887
                     /gene="thiI"
                     /locus_tag="JNZ57_000392"
     CDS             10439..11887
                     /gene="thiI"
                     /locus_tag="JNZ57_000392"
                     /EC_number="2.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014168857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HAY8826728.1"
                     /translation="MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVV
                     RHWDNIEVRAKDENQRLAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQL
                     EGKTFCVRVKRRGKHDFSSIDVERYVGGGLNQHIESARVKLTNPEVTVHLEVEDDRLL
                     LIKGRYEGIGGFPIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEI
                     GVRQVAHYLWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVA
                     ERYGVQALVTGEALGQVSSQTLTNLRLIDNVSDTLILRPLISYDKEHIINLARQIGTE
                     DFARTMPEYCGVISKSPTVKAVKSKIEAEEEKFDFSILDKVVEEANNVDIREIAQQTE
                     QEVVEVETVNGFGSNDVILDIRSIDEQEDKPLKVEGIDVVSLPFYKLSTKFGDLDQNR
                     TWLLWCERGVMSRLQALYLREQGFNNVKVYRP"
     gene            complement(11941..12531)
                     /gene="yajL"
                     /locus_tag="JNZ57_000393"
     CDS             complement(11941..12531)
                     /gene="yajL"
                     /locus_tag="JNZ57_000393"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308505.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein deglycase YajL"
                     /protein_id="HAY8826729.1"
                     /translation="MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLA
                     ITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIV
                     AAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWQDKRVVWDARVKLLTSQGPGT
                     AIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE"
     gene            complement(12494..13405)
                     /gene="panE"
                     /locus_tag="JNZ57_000394"
     CDS             complement(12494..13405)
                     /gene="panE"
                     /locus_tag="JNZ57_000394"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HAY8826730.1"
                     /translation="MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVET
                     DGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGT
                     IEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVL
                     PDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIERE
                     GHHTSAEDLRHYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVP
                     ENTRLFEMVKRKESEYERIGTGLPRPW"
     gene            13573..14064
                     /gene="yajQ"
                     /locus_tag="JNZ57_000395"
     CDS             13573..14064
                     /gene="yajQ"
                     /locus_tag="JNZ57_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414960.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide binding protein YajQ"
                     /protein_id="HAY8826731.1"
                     /translation="MPSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEASFELNDA
                     SKTIKVLSESDFQVNQLLDILRAKLLKRGIEGSSLDVPENIVHSGKTWFVEAKLKQGI
                     ESATQKKIVKMIKDSKLKVQAQIQGDEIRVTGKSRDDLQAVMAMVRGGDLGQPFQFKN
                     FRD"
     gene            complement(14192..15556)
                     /locus_tag="JNZ57_000396"
     CDS             complement(14192..15556)
                     /locus_tag="JNZ57_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308508.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8826732.1"
                     /translation="MNDYKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQG
                     ASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIW
                     GIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITH
                     KLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRESGMVKGSFSKVLAEPRLLKLN
                     FGIMCLHILLMSTFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRK
                     MKQVFVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAG
                     YKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEPA
                     YVSSLRIEIPANIAANEALKVRLLETEGIKEVLIAEEEHSAYVKIDSKVTNRFDVEQA
                     IRQA"
     gene            complement(15705..16595)
                     /gene="cyoE"
                     /locus_tag="JNZ57_000397"
     CDS             complement(15705..16595)
                     /gene="cyoE"
                     /locus_tag="JNZ57_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX farnesyltransferase"
                     /protein_id="HAY8826733.1"
                     /translation="MMFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLV
                     GVSLVVASGCVFNNYIDRDIDRKMERTKNRVLVKGLISPAVSLVYVTLLGIAGFMLLW
                     FGANPLACWLGVMGFVVYVGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGEFDS
                     GAAILLAIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAV
                     ATLMLSLGGYAGYKYLVVAAAVSVWWLGMALRGYKVADDRIWARKLFGFSIIAITALS
                     VMMSVDFMVPDSHTLLAAVW"
     gene            complement(16607..16936)
                     /locus_tag="JNZ57_000398"
     CDS             complement(16607..16936)
                     /locus_tag="JNZ57_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit IV"
                     /protein_id="HAY8826734.1"
                     /translation="MSHSTDHSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASPA
                     VILGTIRAMAVVQVLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNL
                     NYNMMMH"
     gene            complement(16936..17550)
                     /locus_tag="JNZ57_000399"
     CDS             complement(16936..17550)
                     /locus_tag="JNZ57_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit III"
                     /protein_id="HAY8826735.1"
                     /translation="MATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILF
                     ATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIAMYKNNKSQVISWL
                     ALTCLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVL
                     MVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMGAM"
     gene            complement(17540..19531)
                     /gene="cyoB"
                     /locus_tag="JNZ57_000400"
     CDS             complement(17540..19531)
                     /gene="cyoB"
                     /locus_tag="JNZ57_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002444673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit I"
                     /protein_id="HAY8826736.1"
                     /translation="MFGKLSLDAVPFHEPIVMVTIAGIILGGLALVGLITYFGKWTYL
                     WKEWLTSVDHKRLGIMYIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQI
                     FTAHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSL
                     GVGEFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAP
                     GMTMFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYI
                     NLIWAWGHPEVYILIQPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHH
                     FFTMGAGANVNAFFGITTMIIAIPTGVKTFNWLFTMYQGRIVFHSAMLWTIGFIVTFS
                     VGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNE
                     TWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQIDPQFHTMLMIAASGAVLIALG
                     ILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPPPFYNFAVVPHVHERDAFWE
                     MKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMIWHIWWLAIVGFAGMIIT
                     WIVKSFDEDVDYYVPVAEIEKLENQHFDEITKAGLKNGN"
     gene            complement(19553..20500)
                     /gene="cyoA"
                     /locus_tag="JNZ57_000401"
     CDS             complement(19553..20500)
                     /gene="cyoA"
                     /locus_tag="JNZ57_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit II"
                     /protein_id="HAY8826737.1"
                     /translation="MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLI
                     LTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIF
                     LAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTP
                     VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM
                     KFKAIATPDRAEFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFAD
                     VINKFMAHGKSMDMTQPEGEHSAHEGMESMDMSHAESAH"
     gene            complement(20961..22436)
                     /gene="ampG"
                     /locus_tag="JNZ57_000402"
     CDS             complement(20961..22436)
                     /gene="ampG"
                     /locus_tag="JNZ57_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="muropeptide MFS transporter AmpG"
                     /protein_id="HAY8826738.1"
                     /translation="MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENI
                     DLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFFGRRRGWLLATQILLLVAIAAMGFLE
                     PGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSG
                     GLALWLADKWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDF
                     FGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGA
                     LYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGT
                     SAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAA
                     VPGLILLLVCRQTLEYTRVNDNFISRTEYPAGYAFAMWTLAAGVSLLAVWLLLLTMDA
                     LDLTHFSFLPALLEVGVLVALSGVVLGGLLDYLALRKTHLT"
     gene            complement(22480..23058)
                     /locus_tag="JNZ57_000403"
     CDS             complement(22480..23058)
                     /locus_tag="JNZ57_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY8826739.1"
                     /translation="MFKKILFPLVALFMLAGCAKPPTTIEISPTITLPQQDPSLMGVT
                     VSINGADQRTDQALAKVTRDNQIVTLTASRDLRFLLQEVLEKQMTARGYMVGPNGPVN
                     LQIIVSQLYADVSQGNVRYNIATKADIAIIATAQNGNKITKNYRASYNVEGAFQASNK
                     NIADAVNSVLTDTIADMSQDTSIHEFIKQNAR"
     gene            23363..23680
                     /gene="bolA"
                     /locus_tag="JNZ57_000404"
     CDS             23363..23680
                     /gene="bolA"
                     /locus_tag="JNZ57_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414969.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator BolA"
                     /protein_id="HAY8826740.1"
                     /translation="MMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLV
                     SDRFTGERFLNRHRMIYSTLAEELSTTVHALALHTYTIKEWEGLQDTVFASPPCRGAG
                     SIA"
     gene            24024..25322
                     /gene="tig"
                     /locus_tag="JNZ57_000405"
     CDS             24024..25322
                     /gene="tig"
                     /locus_tag="JNZ57_000405"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001716227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HAY8826741.1"
                     /translation="MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGF
                     RKGKVPMNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGED
                     FTYSVEFEVYPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEA
                     EDRVTIDFTGSVDSEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFP
                     EEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMER
                     ELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGGNEKQALELPR
                     ELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNK
                     ELMDNMRNVALEEQAVEAVLAKAKVTEKETTFNELMNQQA"
     gene            25568..26191
                     /gene="clpP"
                     /locus_tag="JNZ57_000406"
     CDS             25568..26191
                     /gene="clpP"
                     /locus_tag="JNZ57_000406"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HAY8826742.1"
                     /translation="MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIF
                     LTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVS
                     TICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK
                     GRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN"
     gene            26317..27591
                     /gene="clpX"
                     /locus_tag="JNZ57_000407"
     CDS             26317..27591
                     /gene="clpX"
                     /locus_tag="JNZ57_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001396736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATP-binding subunit ClpX"
                     /protein_id="HAY8826743.1"
                     /translation="MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLC
                     NDIIREEIKEVAPHRERSALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG
                     DTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVEN
                     IIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKA
                     KSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALT
                     KQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMED
                     VEKVVIDESVIDGQSKPLLIYGKPEAQQASGE"
     gene            27779..30133
                     /gene="lon"
                     /locus_tag="JNZ57_000408"
     CDS             27779..30133
                     /gene="lon"
                     /locus_tag="JNZ57_000408"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001469947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HAY8826744.1"
                     /translation="MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAM
                     DHDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISA
                     LSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSID
                     DPARLADTIAAHMPLKLADKQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVK
                     KQMEKSQREYYLNEQMKAIQKELGEMDDAPDENEALKRKIDAAKMPKEAKEKAEAELQ
                     KLKMMSPMSAEATVVRGYIDWMVQVPWNARSKVKKDLRQAQEILDTDHYGLERVKDRI
                     LEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIR
                     GHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNV
                     AFSDHYLEVDYDLSDVMFVATSNSMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLP
                     KQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQLLLDKSLK
                     HIEINGDNLHDYLGVQRFDYGRADNENCVGQVTGLAWTEVGGDLLTIETACVPGKGKL
                     TYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKSDIHVHVPEGATPKDGPSAGI
                     AMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFEN
                     KRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMQVVTAK"
     gene            30342..30614
                     /gene="hupB"
                     /locus_tag="JNZ57_000409"
     CDS             30342..30614
                     /gene="hupB"
                     /locus_tag="JNZ57_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein HU-beta"
                     /protein_id="HAY8826745.1"
                     /translation="MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVAL
                     VGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN"
     gene            30806..32677
                     /gene="ppiD"
                     /locus_tag="JNZ57_000410"
     CDS             30806..32677
                     /gene="ppiD"
                     /locus_tag="JNZ57_000410"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HAY8826746.1"
                     /translation="MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAK
                     VNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLD
                     QYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQL
                     TTQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYY
                     EQNKNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQT
                     KTEDEAKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKE
                     KGQLSGVIKSSVGFLIVRLDDIHPAKVKSLDEVRDDIAAKVKHEKALDAYYALQQKVS
                     DAASNDTESLAGAEQAAGVKATQTGWFSKDNLPEELNFKPVADAIFNGGLVGENGAPG
                     INSDIITVDGDRAFVLRISEHKPEAVKPLADVQEQVKALVQHNKAEQQAKVDAEKLLV
                     DLKAGKGAEAMQAAGLKFGEPKTLSRSGRDPISQAAFALPLPAKDKPSYGMATDMQGN
                     VVLLALDEVKQGSMPEDQKKAMVQGITQNNAQIVFEALMSNLRKEAKIKIGDALEQQ"
     gene            32828..33199
                     /locus_tag="JNZ57_000411"
     CDS             32828..33199
                     /locus_tag="JNZ57_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8826747.1"
                     /translation="MKHGIKALLITLSLACAGMSHSALAAASVAKPTAVETKAEAPAA
                     QSKAAVPAKASDEEGTRVSINNASAEELARAMNGVGLKKAQAIVSYREEYGPFKTVED
                     LKQVPGMGNSLVERNLAVLTL"
     gene            33293..33691
                     /locus_tag="JNZ57_000412"
     CDS             33293..33691
                     /locus_tag="JNZ57_000412"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgC/FadM family acyl-CoA thioesterase"
                     /protein_id="HAY8826748.1"
                     /translation="MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDSFQWM
                     TAHNIAFVVVNININYRRPAVLSDLLTITSQLQQLNGKSGILSQVITLEPEGQVVADA
                     LITFVCIDLKTQKALALEGELREKLEQMVK"
     gene            complement(33743..34438)
                     /gene="queC"
                     /locus_tag="JNZ57_000413"
     CDS             complement(33743..34438)
                     /gene="queC"
                     /locus_tag="JNZ57_000413"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HAY8826749.1"
                     /translation="MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEID
                     VARELALKLGARAHKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNIL
                     FLTLAAIYAYQVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPL
                     MWIDKAETWALADYYGKLDLVRNETLTCYNGIKGDGCGHCAACNLRANGLNHYLADKP
                     TVMAAMKQKTGLR"
     gene            complement(34503..36203)
                     /locus_tag="JNZ57_000414"
     CDS             complement(34503..36203)
                     /locus_tag="JNZ57_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgrR family transcriptional regulator"
                     /protein_id="HAY8826750.1"
                     /translation="MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLL
                     RQAQEAGWLEWQAQSGRGKRGQLRFLVTPESLRNAMMEQALETGKQQDVLELAQLAPG
                     ELRTLLQPFMGGQWQNDTPTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDN
                     NTQRPIGDLAHHWETSTDGLRWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQ
                     LFISVKRIEVTHPQCLTFFLHRPDYWLAHRLASYCSHLAHPQFPLIGTGPFRLTQFTA
                     ELVRLESHDYYHLRHPLLKAVEYWITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQV
                     SSGISLGFCYLTLRKSPRLSLWQARKVISIIHQSGLLQTLEVGENLITASHALLPGWT
                     IPHWQVPDEVKLPKTLTLVYHLPIELHTMAERLQATLAAEGCELTIIFHNAKNWDDTT
                     LLAHADLMMGDRLIGEAPEYTLEQWLRCDPLWPHVFDAPAYAHLQSTLDAVQVMPDEE
                     NRFNALKAVFSQLMADATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFTEAWLPAPSQ
                     "
     gene            36303..37121
                     /gene="cof"
                     /locus_tag="JNZ57_000415"
     CDS             36303..37121
                     /gene="cof"
                     /locus_tag="JNZ57_000415"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414980.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HMP-PP phosphatase"
                     /protein_id="HAY8826751.1"
                     /translation="MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGR
                     HALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASM
                     HIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQI
                     QLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDRE
                     MLGSVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE"
     gene            37187..37732
                     /locus_tag="JNZ57_000416"
     CDS             37187..37732
                     /locus_tag="JNZ57_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706341.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HAY8826752.1"
                     /translation="MVFKPHRINCRDFTFKIELKEKKILCGRAMLDKIDRKLLALLQQ
                     DCTLSLQALAEAVNLTTTPCWKRLKRLEDDGILIGKVALLDPEKIGLGLTAFVLIKTQ
                     HHSSEWYCRFVTVVTEMPEVLGFWRMAGEYDYLMRVQVADMKRYDEFYKRLVNSVPGL
                     SDVTSSFAMEQIKYTTSLPIE"
     gene            37762..39423
                     /locus_tag="JNZ57_000417"
     CDS             37762..39423
                     /locus_tag="JNZ57_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001235587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SmdA family multidrug ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HAY8826753.1"
                     /translation="MRLFAQLSWYFRREWRRYLGAVALLVIIAMLQLVPPKVVGIVVD
                     GVTEQHFTTGQILMWIATMVLIAVVVYFLRYVWRVLLFGASYQLAVELREDYYRQLSR
                     QHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIMMSTQISWQL
                     TLFALLPMPVMAIMIKRNGDALHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDR
                     QSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQ
                     LTSFMMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGE
                     LDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGD
                     IRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGCPNATQQEIEHVARLAS
                     VHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLVNAEILILDDALSAVDGRTE
                     HQILHNLRQWGQGRTVIISAHRLSALTEASENVMNASHTIKHGAV"
     gene            39528..>40042
                     /locus_tag="JNZ57_000418"
     CDS             39528..>40042
                     /locus_tag="JNZ57_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000878026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HAY8826754.1"
                     /translation="MKYTPVGVDIAKHVIQIHFINEHTGEVVDKQLRRQDFLTFFGNR
                     EPCLIGMEACGGSQHWARELTKLGHKVRLLQARFVKAFVMGNKNDVMDARAIWMAVQQ
                     PGKEIAVKTEEQQSVLVLHRTRMQLVKFRTAQINALHGTLLEFGETIHKSRAAMEREF
                     PEALERMKEILP"
BASE COUNT        10044 a         9995 c        10648 g         9355 t
ORIGIN      
        1 atcaggccta cgttatttca gcaatatatt gaatttacgt gcttttgtgg gccggacaaa
       61 gcgtttacgc cgcatccggc atgaacaaag ctcacgttgt taacaatcag aaatgccggg
      121 aataaatccc ggcattttca taatcagaag ttgtaaccta ctaccaggta accaccccag
      181 ccggtagagc gaacgttgaa gttgccgttg ccgaagttca gttctgcatc gtcgttccac
      241 tgaccaccgt cgtgccagta acgagctacg acagagtagt gccagtgatc gtagttcaga
      301 gccagaatat ggctggaagc gatagagtta ttagtacggg tcttaatacc gttgattgcg
      361 ttaccgctgt catcccctaa atcggaaccc cagtcgaagt tggtgaagcc gatgtagctc
      421 agctgaccgc cccacagatc ggtaatcggc acaaagtatt taattttgaa acggtaaccg
      481 tcccactcgt tttcgttcgc tgcgccatag ttctgccact ggtatttcgc atagacgttc
      541 atggacaggc tcatcggcag accagtatcg atgtcggtac ccagacccat gtaccaggtg
      601 ctctggcgac catttttatt acgacccatg tcgtaaatgt agttgttcgc gaagtaccac
      661 tctttgaacg gaccgaagtt aaggtcagta ttggtcagct tgtcgatgga gaaacgtggt
      721 tcgatttcca taaacagcgg agaaccgtgg ttccagatac ctttagcatc ggagttaccg
      781 ccgaagaata ccggcgcatc cgcataacca tagaagtcga accagtcttt tttagcgaat
      841 gcttcgtact caaggtaggt atcgttgcgg atctgcggtc cgaaacgggt gtgatagctt
      901 ccgacaacgt taacgctctg gtgccaccag tcggaaagat actgcggttt gtcgttttca
      961 gctgcgttga cagtaaaaga cgaagagagc gccagtaccg caccggctgc cagtaatgtt
     1021 tttttcatat gtatgccact gtttgaaaat cccttgcggg agtgaaaaag gcgcaaattg
     1081 cgtttctaaa tatttcgtat acagaggagc ctattataaa aatcattgct cacaaaaata
     1141 tgtttcgttt cacagttcta tcatttacgt aatcgattgc gttcacgttt acacacattc
     1201 gggcggggat tgtactgact ttcgcccttg ttgcaaactt ttactatcaa tccaggtgat
     1261 gtaagcagag taacaaaatg acggggaaag atgttgcggg acgcacaaaa tcgtcccgaa
     1321 atacgtttac tgcataacag gttgaatgtc gtggatacgt acaaagccta actgatccac
     1381 agaaatcccc tttaattgta acggaatatc aacatcgctg ggggcgagga cgctggcagg
     1441 ggcattaatc aattgattct gcacattgat ttcctgaaag ttgtctattg ttccctgaat
     1501 ttgcccatat tcaacagttc cgctgaatgc gggcaaggga tcattcgact caccctgaat
     1561 acgtagtgta aggggggtgc catctgtatc aggcgtaata ttcaccagcg acatacgtaa
     1621 agtaccgatc tggctttcca gtcttgccgg tgttttcgct ccaggcagaa ggtaaccccc
     1681 actgctggat tttgcattca gcctgttttg ctgagtgatt ttgactgttt cttgattgag
     1741 ttgcgtcatc tcctggttca gcgtgctgac gctgtgtttc atctgtcgca cttcactttg
     1801 ctgcacacag gcgctaaggc tgaacaggct tcccagcagg agcagtcgaa aaacgttagt
     1861 attcataggt cgtccctttc tcgtcgcaat tagcctaatg gtagagggta aaagcagcga
     1921 aagcatcgat cctttatctc aaaagcgttg cgcctttgtt gtatcgtcag ttcagggtaa
     1981 aatagatttc cgttaaccac ctggtcagga cgccgtatgc attgcccatt ctgtttcgcc
     2041 gtggacacta aggtaattga ctctcgtctc gtgggcgggg gttcatccgt acgccgccgt
     2101 cggcagtgtc tggtgtgtaa tgaacgtttc accacctttg aagtggcgga gctggttatg
     2161 ccgcgtgttg taaaaagcaa cgacgtgcgt gaaccgttta atgaagagaa attgcgtagc
     2221 ggaatgctgc gggcgctgga aaaacgtccg gtgagttccg atgacgttga aatggcaatc
     2281 aatcatatta aatcgcagct gcgcgccacc ggtgagcgcg aagtaccgag caagatgatt
     2341 ggcaatctgg tgatggagca attgaaaaag ctcgataaag tcgcctatat ccgttttgcc
     2401 tctgtctacc gcagtttcga agatatcaaa gaatttggcg aagagatcgc gcgcctggag
     2461 gactaagccg tgcaggacga gtattacatg gcgcgggcgc taaagctggc gcaacgagga
     2521 cgttttacca cccaccccaa cccaaatgtc gggtgcgtca ttgtcaaaga tggcgaaatt
     2581 gtcggtgaag gttaccatca acgagcgggt gaaccacatg ccgaagtaca cgcgttgcgt
     2641 atggcgggtg aaaaagccaa aggtgcaacg gcgtatgtga cactcgaacc ttgcagccat
     2701 cacggccgta cgccgccttg ctgtgatgct ttaattgccg caggtgtggc gcgcgtggtt
     2761 gcctcgatgc aagatcctaa cccgcaggtc gctgggcgtg gactttaccg tctgcaacag
     2821 gctggcattg acgtcagcca cggcctgatg atgagtgaag ccgagcaatt gaataaaggc
     2881 tttctcaagc ggatgcgcac cggctttcct tatattcagt taaaacttgg cgcatcgctt
     2941 gatggtcgca cggcgatggc gagcggcgaa agccagtgga tcacttcgcc ccaggcgcgg
     3001 cgtgatgtac aacgactgcg cgcgcaaagt catgccattt taaccagcag cgccacggtg
     3061 ctggcggatg atcctgcctt aacggtgcgt tggtccgaac tggatgaaca aactcaggcg
     3121 ctctacccgc aacaaaatct ccgccagccg gtacgtattg tgattgatag ccaaaatcgc
     3181 gtgacgccgg aacatcacat tgtgcagcag cccggcgaaa cctggttcgc gcgtacgcag
     3241 gaagattctc gtgagtggcc ggaaacggtg cgtaccttgc tgattccaga gcataaaggt
     3301 catctggatc tggttgtact gatgatgcaa ctgggtaaac agcagattaa cagcatctgg
     3361 gtggaagcgg ggccaacgct cgctggcgca ttgctgcagg cgggtttagt cgatgagctg
     3421 attgtctata tcgcacctaa actattaggc agcgacgccc gtggattatg caccctgcca
     3481 gggcttgaga aattagccga cgccccccaa tttaaattca aagagatacg tcatgtaggc
     3541 ccggatgttt gcctgcattt agtgggtgca tgatctcccg gctcgaaagg gaagcagcgc
     3601 acgaaatatt atgctaaaat ccgcccccct gcggggccat actcgaaccc gaaggaagaa
     3661 aatgaacatt attgaagcta acgttgctac cccggacgct cgcgtcgcca tcaccatcgc
     3721 gcgtttcaac aactttatca atgacagcct gctggaaggt gcaattgacg cactgaaacg
     3781 tatcggtcag gtaaaagatg aaaacattac cgttgtttgg gtgcctggtg cctatgagct
     3841 gccgctggcg gcgggtgcac tggctaaaac cggtaaatac gacgcggtga ttgcgctggg
     3901 tacggttatt cgtggtggca ctgcccattt tgaatatgtc gctggtggtg caagcaacgg
     3961 cctggcgcat gttgcccagg acagcgaaat tccggttgct tttggggttc tgaccactga
     4021 aagcattgaa caagcgatcg aacgtgctgg caccaaagct ggcaacaaag gtgcagaagc
     4081 tgcactgacc gcgcttgaaa tgattaatgt attgaaagcc atcaaggcct gaaattagta
     4141 aggggaaatc cgtgaaacct gctgctcgtc gccgcgctcg tgagtgtgcc gtccaggcgc
     4201 tctactcctg gcagttgtcc cagaacgaca tcgctgatgt tgaataccag ttcctggctg
     4261 aacaggatgt aaaagacgtt gacgtcctgt acttccgtga gctgctggcc ggggtggcga
     4321 ctaataccgc atacctcgac ggactgatga agccatacct gtcccgtctg ctggaagaac
     4381 tgggacaggt agaaaaagca gtactgcgca ttgcgctgta cgaactgtct aaacgtagcg
     4441 atgtgccata caaagtggcc attaacgaag cgatcgaact ggcgaaatcg ttcggcgcag
     4501 aagacagcca taagttcgtc aacggtgtac tcgataaagc agcacctgtg attcgcccta
     4561 acaaaaagta atatccaggc cggtagattc acggaagacc gttccatgat cgccggcctt
     4621 ttctttttta cctgctgagg cataacgtat ggcatgtggc gagttctccc tgattgcccg
     4681 ttattttgac cgtgtaagaa gttctcgtct tgatgtcgaa ctgggcatcg gcgacgattg
     4741 cgcacttctc aatatccccg agaaacagac cctggcgatc agcactgata cgctggtggc
     4801 gggcaaccac ttcctccctg atatcgatcc tgctgatctg gcgtataaag cactggcggt
     4861 gaacctaagc gatctggcag cgatgggggc cgatccggcc tggctgacgc tggcattaac
     4921 cttgccggac gtagacgaag cgtggcttga gtccttcagc gacagtttgt ttgatcttct
     4981 caattattac gatatgcaac tcattggcgg cgataccacg cgtgggccat tatcaatgac
     5041 gttgggtatc cacggctttg ttccgatggg acgagcctta acgcgctctg gggcgaaacc
     5101 gggtgactgg atctatgtga ccggtacacc gggcgatagc gccgccgggc tggcgatttt
     5161 gcaaaaccgt ttgcaggttg ccgatgctaa agatgcggac tacttgatca aacgtcatct
     5221 ccgtccatcg ccgcgtattt tacaggggca ggcactgcgc gatctagcaa attcagctat
     5281 cgatctctct gacggtctga tttccgatct cgggcatatc gtgaaagcca gcgactgcgg
     5341 cgcacgtatt gacctggcat tgctgccgtt ttctgatgcg ctttctcgcc atgttgaacc
     5401 ggaacaggcg ctgcgctggg cgctctctgg cggtgaagat tacgagttgt gtttcacggt
     5461 gccggaactg aaccgtggag cgctggatgt ggctctcgga cacctgggcg taccgtttac
     5521 ctgtatcggg caaatgaccg ccgatatcga agggctttgt tttattcgtg acggtgaacc
     5581 tgttacgtta gactggaaag gatatgacca ttttgccacg ccataaagat gtcgcgaaaa
     5641 gtcgcctgaa gatgagtaat ccgtggcatc tacttgctgt cggattcgga agtggattaa
     5701 gcccgatcgt tcctgggacg atgggctcgc tggcagcgat tccgttctgg tatctgatga
     5761 cctttttgcc ctggcagctc tactcgctgg tggtgatgct ggggatctgt atcggcgtct
     5821 atctttgtca tcagaccgca aaagatatgg gcgtgcacga tcacggcagc attgtttggg
     5881 acgaatttat tggtatgtgg atcacgctca tggcgctgcc gaccaatgac tggcagtggg
     5941 ttgccgccgg gtttgtgatt ttccgtattc tggatatgtg gaaaccgtgg ccgatccgct
     6001 ggtttgatcg caatgtgcat ggcggcatgg ggatcatgat agatgatatt gtcgccgggg
     6061 tgatctccgc tggcatcctg tactttattg gtcatcactg gccgctgggc attctgtcgt
     6121 agttgtgcac cgatgcctga tgtgacgctt gttgcgtctc atcaggcctg gactcttatt
     6181 taaatcctac taccggatgc ggtttatacg gcgtttccag ttcggcaatc tgttccggct
     6241 tcaaagtgat atccaccgcg ttcaatagct catcaagctg ttcttcccgc gatgtaccga
     6301 taatcggtgc ggcaatgccc ggtttactca acaaccaagc cagcgcaact tgtgctcgtg
     6361 ttgcaccgag ttcttcactg acgcccgtta accgctctgc gatctgcgcg tcattttcat
     6421 cgctttcttt atagagattt ttccccacct catcagacac cagtcgtgcg gtagtttctc
     6481 cccacggacg cgtcagtcgc ccccgcgcca gcgggctcca cggaatcacc gccacgccct
     6541 cctgataaca cagtggcagc atctcgcgct cttcttcgcg ataaatcaga ttgtagtgat
     6601 cctgcatact gacaaactgc gcccagccgt gctgtttttg gagttccagt gcctgagcaa
     6661 actgcgaagc gtgcattgat gacgcgccga tataacgcgc tttcccggct tttaccacgt
     6721 cgttcagggc ttccagcgtc tcttcgatcg gcgtgttgta atcccagcga tgaatttgca
     6781 ggatatcgac ataatccatg ccgagacgtc gcaggctgtc gtcgatagag cgcaaaattt
     6841 gtgcacggga taatccttcc ggtaaatcac caacgcgatg gaacactttg gtggcaacga
     6901 ccacgtcttc acgacgggcg aaatcccgca gtgcgcgacc aacgatctct tcgctgctac
     6961 catcggaata gctattggcg gtatcaaaga aatttatgcc gccttccagt gcgcgtttaa
     7021 ttatgggacg gctgctctct tccggcagtg tccatgcgtg attaccacga tctggctcgc
     7081 caaaggtcat acagccgagg caaagtcggg aaacgcgaag gtcggttttt cctaaggggt
     7141 tgtattgcat gctgccactc ctgccatgaa taatttctta agcatagcag gagtggagta
     7201 gggattatgc cagccaggcc ttgattttgg cttccatacc ggcggcatcg aggccgagtt
     7261 cggcgcgcat ttcttcctgc gttccttgcg gaataaagaa gtcaggcagg ccaatgttca
     7321 gcacggggac tggtttacga tgggccatta gcacttcgtt cactccgcta cctgcaccgc
     7381 ccataatggc gttttcttct acggtaacca gtgcttcatg actggcggcc atttccagaa
     7441 ttaacgcttc atcaagcggt ttcacaaaac gcatatcgac cagcgtggcg ttcagcgatt
     7501 cggcgacttt cgccgcttct ggcatcagcg taccaaagtt aaggatcgcc agtttctcgc
     7561 cacgacgctt cacaatgcct ttgccaattg gtagtttttc cagcggcgtc agttccacgc
     7621 cgaccgcgtt gccacgcggg tagcgcaccg ctgacgggcc atcgttatag tgatagccgg
     7681 tatagagcat ctggcgacat tcgttttcat cgctcggggt cataatgacc atttccggta
     7741 tgcagcgcag gtaagagaga tcaaaagcac cctgatgggt ttgaccgtca gcaccaacaa
     7801 tgcccgcgcg gtcgatggcg aacaggaccg gaagcttttg aattgccacg tcatgcagca
     7861 cctgatcata ggcgcgttgc aggaaagtgg agtagatcgc gacaatgggt ttgtacccac
     7921 caatcgccag accggcggca aaggtcactg cgtgttgctc ggcaattgcc acgtcgaagt
     7981 agcgatccgg gaatttacga gaaaactcga ccatgccgga accttcacgc atcgccggag
     8041 taatcgccat cagcttgtta tctttcgccg ccgtttcgca caaccagtcg ccaaagattt
     8101 ttgaatagct cggtaaaccg ccgctacttt tcggcaaaca accgctggag ggatcaaatt
     8161 taggcacggc gtggaaagtg attgggtctt tttctgccgg ttcataacca cgaccttttt
     8221 tggtcatgat atgcaggaac tgcgggcctt tcaggtcacg catgttcttc agcgtggtga
     8281 taagccccag cacatcgtga ccgtcaaccg ggccgatgta gttaaagccc agctcttcaa
     8341 acaacgtgcc agggactacc atgcctttaa tatgttcttc ggtacgtttg agcagctctt
     8401 taatgggtgg cacgccagag aaaacttttt tcccgccttc gcgcagtgaa gagtaaagct
     8461 taccggaaag cagctgcgcc agatggttgt tgagcgcgcc gacattttcg gaaatcgaca
     8521 tttcgttgtc gttgaggacc accagcatat caggacggat atcgcccgcg tgattcatcg
     8581 cttcaaacgc catgcctgcg gtaatcgcgc catcgccgat tacacagacg gtacggcgat
     8641 ttttgccttc tttctcggca gcaaccgcaa taccaattcc ggcactgatg gaggttgatg
     8701 aatgcccgac gcttaatacg tcatattcgc tttcgccgcg ccacgggaac gggtgcaggc
     8761 cgcctttctg acggatggtg ccgattttgt cgcggcgtcc ggtcaaaatt ttatgcggat
     8821 aagcctgatg ccccacatcc caaatcaatt ggtcaaacgg ggtgttgtag acatagtgca
     8881 gcgccacggt cagttcgacc gtgcccagcc cggaggcgaa gtgcccgctg gaacggctca
     8941 cgctgtcgag taaatagcgg cgcagttcgt cgcagagttt cggtaaactc tctttcggca
     9001 acagtcgtaa ctcctgggtg gagtcgacca gtgccagggt cgggtatttg gcaatatcaa
     9061 aactcatcag gggcctatta atacttattg tttatttatt acgctggatg atgtagtccg
     9121 ctagcgcttc cagtgccgag gtatcgagtg actgttcagc cagttgtttc agcgactgac
     9181 gggcatcgtc gatcagatcc cgggctttct tccgggcttg ctcaagaccc agaagtgcag
     9241 ggtaggtact tttaccaagt tgctggtcgg caccctggcg ttttcccaac gttgcagtat
     9301 ctcctaccac atccaggatg tcatcctgaa cctggaaggc aaggccgatg ctctctgcgt
     9361 acttgtcgag tactggcaga gcacgacgcc ctttatctcc ggcgcttaat gcaccaaggc
     9421 gaacggcggc gcgaatcaat gcgccggttt tatgacgatg aatacgctca agcgcgtcca
     9481 gaggtacgtg tttgccttcc gcgtctaaat ctaatgcctg accaccgcac attccggcaa
     9541 taccgctggc gctcgccagt tcagaaatca tcgaaattct gtcgcgatcc gacacttccg
     9601 gcatatcagc atcgcttaaa atcgagaacg ccagcgtttg taaagcgtcg ccagcgagaa
     9661 tcgcgtttgc ttctccaaac ttcacatggc aggtcggcaa accgcgacgc agatcgtcat
     9721 catccatcgc cggtaaatca tcatgaatta atgagtaagc gtggatacac tctacggcgg
     9781 cagcgggtgc gtccagcgtg tttgtgctaa cgccaaacat atgaccggtg gcataaacca
     9841 ggaagggtcg cagacgctta ccacctaata atgcgccata ctgcatggtt tcgaccacgg
     9901 gagtgttctg aaagggcagt ggggcgataa aacggctcag cgcctggttg gcctgcttaa
     9961 cgcaggcttc gagttgctgc ggaaagtcca ttactcattg tccggtgtaa aaggggttag
    10021 agaggcgtct tcattgtcag acagcagaat ttgtacgcgc tgttcggctt gttgtaattt
    10081 ggcctgcccc tgacgtgcca gctgcacgcc gcgttcgaac tcgttcagcg cctcttccag
    10141 cggcaggtcg ccactttcca gacgggttac aatctgttcc agctcgctca gcgccttttc
    10201 aaagctggcg ggagcctcat ttttcttcgg cataatgaat gtctgactct caatattttt
    10261 cgccccgtca tggtaacgga ctcagggcaa atagcaaata acgcgcaatg gtaaggtgat
    10321 gtgcgcagca aagcgatgtt agtggtatac ttccgcgcct ggatgcagcc gcaggtgtgg
    10381 gctgctgtat ttttccctat acaagtcgct taaggcttgc caacgaacca ttgccgccat
    10441 gaagtttatc attaaattgt tcccggaaat caccatcaaa agccaatctg tgcgcttgcg
    10501 ctttataaaa atccttaccg ggaacattcg taacgtttta aagcactatg atgagacgct
    10561 cgctgtcgtc cgccactggg ataacatcga agttcgcgca aaagatgaaa accagcgtct
    10621 ggctattcgc gacgccctga cccgtattcc gggtatccac catattctcg aagtcgaaga
    10681 cgtgccgttt accgacatgc acgatatttt tgagaaagcg ttggttcagt atcgcgatca
    10741 gctggaaggc aaaaccttct gcgtacgcgt gaagcgccgt ggcaaacatg attttagctc
    10801 gattgatgtg gaacgttacg tcggcggcgg tttaaatcag catattgagt ccgcgcgcgt
    10861 gaagctgacc aatccggaag tgactgtcca tctggaagtg gaagacgatc gtctcctgct
    10921 gattaaaggc cgctacgaag gtattggcgg tttcccgatc ggcacccagg aagatgtgct
    10981 gtcgctcatt tccggtggtt tcgactccgg tgtttccagt tatatgttga tgcgtcgcgg
    11041 ctgccgcgtg cattactgtt tctttaacct tggcggcgcg gcgcatgaaa ttggcgtgcg
    11101 tcaggtggcg cattatctgt ggaaccgttt tggcagctcc caccgcgtgc gttttgtcgc
    11161 tattaatttc gaaccggtcg tcggggaaat tctcgagaaa atcgacgacg gtcagatggg
    11221 cgttatcctc aaacgtatga tggtgcgtgc cgcgtctaaa gtggctgaac gttacggcgt
    11281 acaggcgctg gtcaccggcg aagcgctcgg ccaggtgtcc agtcagacgc tgaccaacct
    11341 gcgcctgatt gataacgtct ccgatacgct gatcctgcgt ccgctgattt cttacgacaa
    11401 agagcacatc atcaacctgg ctcgccagat tggcaccgaa gactttgctc gcacgatgcc
    11461 ggaatattgc ggtgttatct ccaaaagccc gacggtgaaa gcggttaagt cgaagattga
    11521 agcggaagaa gagaaattcg acttcagcat tctcgataaa gtggttgaag aagcgaataa
    11581 cgttgatatc cgcgaaatcg cccagcagac cgagcaggaa gtggtggaag tggaaaccgt
    11641 caatggcttc ggctcgaacg acgtgatcct cgatatccgt tctatcgatg aacaggaaga
    11701 taagccactg aaagtcgaag ggattgatgt agtttctctg ccgttctata aactgagcac
    11761 caagtttggc gatctcgacc agaacagaac ctggctactg tggtgtgagc gcggggtgat
    11821 gagccgtctg caggcgctct atctgcgcga gcagggcttt aacaatgtga aggtatatcg
    11881 cccgtaattt gtggttgtaa cgtcgcatct ggtcagatgc gacgcttacc gcatccgaca
    11941 ctactcgtaa taattataaa tccctgccgc catcaccagt tgtgatgcca cttcatgggc
    12001 tttctcgcgc ccaaccagca ggtcgataat tttcagacca aagtcgatag ctgtccccgg
    12061 cccctggctg gtcagcaatt ttacccgtgc atcccagacg acgcgcttgt cctgccattg
    12121 ttcagcggga attttgtctt tcagcgtcgg gaagccggtc atattaccaa tcgggaagat
    12181 atcgtgcggc accagcacgg tggctggcgc ggcgcaaata gccgcgacga tacgcccgga
    12241 acggtggaac tgtttaacgg tttcaaccag cagagtgcta tcgcgaaaac actctgcgcc
    12301 tttaatgcca ccaggcagta cgatcacgtc atattcgcca tcagccacct cgaccagcgg
    12361 cgcatccgcc agcagcttca cgccgcgcga gcaggtaatt gccaggttgc catcgctggc
    12421 tacgctggca gtggtgactt tgataccgcc gcgaaccaag aggtcgatcg tggtgacggc
    12481 ttcagtctct tcactaccag gggcgaggca aaccagtgcc gatgcgctca tattcactct
    12541 cctttctttt taccatttca aacaggcggg tgttttccgg tacggcaatc ccatgcgcgc
    12601 gggcgcggcg taagagaaaa ccattgatat agtcgatttc ggtgtggcgc agcgcgcgga
    12661 tatcctgcaa catcgacgag atattttccg ctgtggcatc aatcacctgc atcacgtaat
    12721 gacgcaaatc ttccgctgaa gtatgatgcc cttcgcgttc gatcactgcc gcgacttctt
    12781 cgcatatttg cataatttct tgcggatgat gacgtaattc accgttcggg caattccaga
    12841 tggcggtcag tggattaatc acgcagttga ctgccagctt gcgccacagc tcggcgcgaa
    12901 tattgttatg ccaggcaacg tcaggcaaca cggtttgtaa aatatccgcc agataactgt
    12961 aatcgccatc ctgttgccgt gccggaccaa tatgcgtgat accgtttgcc acatgaataa
    13021 tgacattgcc gtcgcggcgg gcggcatggg tggtggtgcc catcagtaat ggctgctgaa
    13081 tattttgcaa ctcttcgatg gtgcccatgc cgttgtgaat taacagtatt ggcgtggtta
    13141 caggcagtgt ggacgcgagg cttttgacgg catcggaaac ctgccatgct ttcagcgtca
    13201 ccaggagcag atcgctggtg gcgagaaaat cgggatcgtt ggcggtcagc gattcgttaa
    13261 atatcgaacc atctgtctca accagattca cactacaata aggttgcggt acgcgcagcc
    13321 agccctgaac ttcatgaccc tgtttgcaaa gtgctgtaag ccataattgc cctaaggcac
    13381 cgcatcccaa tacggtaatt ttcattgttc ctcctcaccc gcaaccactc cgggtgttca
    13441 ataaggctat cccttaattg tgcatgctgt tgcgactatg cacaattaag ggatacgtcc
    13501 tggtgcagga ctgtcggtta tttaactttg cgggtattat gcttcgcatc aaaaatgaag
    13561 ggagaggaaa agatgccatc tttcgatatt gtctctgaag ttgatcttca ggaagcacgt
    13621 aacgcggtcg ataacgcgag ccgcgaagtg gagtcccgtt ttgacttccg taacgttgaa
    13681 gcctcatttg agctgaacga cgccagcaaa accatcaaag tgttgagcga gtccgatttc
    13741 caggtcaatc agttgctgga tattctgcgt gccaagctgc tgaagcgcgg cattgaaggc
    13801 agttcactgg atgtaccgga aaatatcgtt catagcggta aaacctggtt tgtggaagcg
    13861 aaactgaagc agggcattga gagcgcgacc cagaaaaaaa tcgtcaagat gatcaaagac
    13921 agcaaactga aagtgcaggc gcaaattcag ggcgatgaga tccgcgtgac tggcaaatct
    13981 cgtgatgatt tgcaggctgt catggcgatg gtgcgcggtg gcgatctggg tcagccgttc
    14041 cagttcaaaa acttccgcga ttaatcgcga caacctgcgc tttgttcatg tcagatgcgg
    14101 catgaacgcc tggttcggcc tacaaaggct tgtaaatcag gagcttagta gacctgatga
    14161 gcgtagcgca gcaggcaatt tcgcctcgct tttatgcctg gcgaattgcc tgttcaacat
    14221 caaagcgatt cgtcactttg ctgtcgattt tcacataagc tgaatgttct tcttctgcaa
    14281 tcaacacttc tttgatgcct tcagtttcta gcaaacgcac ttttaacgcc tcgtttgcgg
    14341 caatgttcgc cgggatttca atgcgcaaac tgctgacata cgccggttct ttcatggtac
    14401 tggcgactgc cagccacact gcggccagca ttgcgccagc gagaaatacg ccctgaccgt
    14461 caaacatgcc gtcaatccag ccgcccagtg aaccgccaat cgccacgcca agaaactggc
    14521 tggtggagta aacacccatc gctgtacctt tgtaacctgc tggcgactct ttactgataa
    14581 gtgaaggcag aagggcttcc atcaaattaa acgctacaaa gaaaagctgc acgccgacca
    14641 ccagttgcca gaactgcgtt tgcgcgttcc acaacacaat ttccgcaacc acgatcaacc
    14701 cgacgcagaa gacaaagact tgcttcattt tgcgcttaac ttcagcgtag ataatgaaag
    14761 gcacgaccga gccaaaggcg attagcattg tcgccagata gaccttccag tgttcagccg
    14821 ccgggaaccc tgcatcagcc agttgtccgg gcagggcaac aaacgtcgac atcagcaaaa
    14881 tatgcagaca cataatgcca aagttgagtt tcagcagccg cggttccgcc agcactttac
    14941 tgaaactgcc tttcaccatt ccggactcac gattaagtac gtgagtgcta ctgttgggca
    15001 caacccaaat ggtcaacgca atgccggtcg ttgccagaat agcgatcatc cagaacagcg
    15061 cgtgcagccc aagtttgtga gtgatgatcg ggccaagcac catcgcaatg gcaaaggtaa
    15121 tgccaaagct cacgccgata aacgccattg ctttggtgcg gttttgttcg cgcgtgagat
    15181 cggaaagcag cgccataacg gcagcggcaa tcgcaccgga gccttgtagc gcccggccca
    15241 gaataattcc ccagatggag tcagagagcg cagcgataac gctaccggcg gcaaacaccg
    15301 ccagcccacc gacaattaat ggtttgcgac caatacggtc ggaaagcagg ccaaacggaa
    15361 tctgaaaaac ggcctgagtc agaccataaa taccaatggc aataccgatt aatgcttcgc
    15421 tggcaccttg cagagccatg ccatacgtgg tcagaaccgg cagaaccata aacatgccca
    15481 gcatgcgcaa cgagaatacg gtccctaaac cccaggtcgc gcgcctctca cctggcgtca
    15541 ttttataatc gttcattacc acctctgttt taaattcgcg actagtgtaa agcggcaaac
    15601 gaatggggta aacatgcgga ttttttagta aatatttcga gagggatatg tttctaatgc
    15661 taagaaaaaa ggtgccgtag caccttttta atagagaggt tttgttacca cacagcagcc
    15721 agcagcgtat gcgagtccgg taccataaaa tcaacggaca tcatcaccga gagggcagtg
    15781 atggcgatga tagagaagcc gaacagcttg cgcgcccaga ttctgtcatc agcaacttta
    15841 taaccgcgca gagccatacc taaccaccag acgctaaccg ccgcggcgac caccagatat
    15901 ttatatccag cgtaaccgcc aagagagagc atcagcgtgg caacggcaaa ggcgatgata
    15961 tacagcgtga tgtgattctt cgccaccgaa atgcctttta ccactggcaa taccggaatg
    16021 tttgccgcct ggtaatcctt aaagcggaaa atggcgatgg cataggagtg aggcatctgc
    16081 cacaggctga agatagccag caggatcgct gcgccgctat cgaactcgcc ggttactgca
    16141 cagtagccaa tcaccggcgg cgcagcgccg gagagcgaac caatcaatgt gccgtagact
    16201 gagtggcgtt tcatgtacag gctatagacg ccgacataaa ccacaaagcc catcaccccc
    16261 agccagcagg ccagcggatt cgcgccaaac cacagcagca taaagccagc aatacccagc
    16321 aaggtgacgt acaccagcga gacagcagga gagatcaggc ctttaaccag cacccgattc
    16381 ttcgtccttt ccatctttct gtcgatatcc ctgtcgatgt agttgttaaa cacacaaccc
    16441 gacgccacaa ccagtgacac cccaaccagc gtgtagataa acaggggata atcaatgctg
    16501 ccctttgagg ccagcaggaa tcccccaatc accgagatca ggttgccaaa gatgatgcct
    16561 ggtttcgtta cttgcaggta ttgcttaaac atcataaccg ccgctcttag tgcatcatca
    16621 tgttgtagtt gaggttccac ataatccaga tggagcctac aaccaggata gcgatgatta
    16681 gcacggtgaa gacaaacgcc gtcatgttcc agccttcatc tgatttggta ttcatgtgca
    16741 ggaagcacac cagatgcacc agaacctgta ccactgccat tgcccggatt gttcccagaa
    16801 ttacggccgg agaggcagcc cctgtcatca ccatccagaa cggaatcacc gtcagaatga
    16861 tcgacaggat aaagcctgtc atgtaggttt ttacgctgcc atgggacgcg ccgctgtgat
    16921 cggtagaatg actcattaca tcgcccccat cagataaaca acagtgaaca cacagatcca
    16981 aaccacatcc aggaagtgcc agaacaggct caggcacatg atgcgggtac ggttagtgct
    17041 ggtcaggccg cgacgagcga tttgtaccat cagcaccgcc atccagataa gaccggaagt
    17101 gacgtgcaga ccgtgcgtgc cgaccagcgc aaagaacgct gacaggaagc cgctgcgatc
    17161 cggacccatg ccgttaacaa tcaggtgatg gaattcgtag atttccatcc cgataaatcc
    17221 ggcaccaaac aaacaggtca acgccagcca ggagataacc tggcttttgt tgtttttgta
    17281 catggcgata gccgccatgc cgtaggtgat ggagctgaac aacagcaaga aagtttcaac
    17341 cagaacgaac ggcagttcga aaatgtcctt acctgtcggg ccgcctgcgg tgccgttcac
    17401 cagaacggca taggtagcaa acaagattga gaacagaatg cagtcgctca tcaggtagat
    17461 ccaaaatccg aagattttgg ttccgcctgc atcgtggtgc ccgtgttcgt gcgcgtgggc
    17521 agtcgcgtgc gtcaaagtat cagttgccat ttttcagccc tgccttagta atctcatcga
    17581 aatgctggtt ttccagtttt tcgatttctg ccaccggcac gtagtaatcc acgtcctcgt
    17641 cgaagctttt cacgatccag gtgatgatca tgcctgcgaa gccaacaatc gccagccacc
    17701 agatatgcca gatcatggcg aaaccgaaga tggtggagaa agctgcaatg acgatacctg
    17761 caccgctgtt tttcggcata tgaatttctt catagtggtc aggcttttta tacgcttcgc
    17821 ctttctcttt catttcccag aatgcatcac gctcgtgaac gtgcggcaca acggcaaagt
    17881 tatagaacgg aggcggggaa gaggttgccc actccagcgt acggccaccc cacgggtcgc
    17941 cagtcaggtc acggttctgg tcgcggtcgc gaatagaaac gtacatctga ataacgaggc
    18001 agagaatacc cagcgcaatc agtactgcac cgctagctgc aatcatcagc atggtgtgga
    18061 actgcgggtc aatctgctgg ctcaaacgac gggtcatgcc catgaagccc agcgcataca
    18121 gcggcataaa ggcaacgaag aagccgatga tccagaacca gaacgcgcgt ttaccccagg
    18181 tttcattcag tttgaaaccg aacgctttag gccaccagta ggtcatccct gcgaagcagc
    18241 cgaagaccac gccgccgatg ataacgttat ggaagtgcgc aatcaggaac aggctgttat
    18301 gcagaacgaa gtccgcgccc ggtactgcca gcagcacgcc agtcatcccg cccaccgaga
    18361 aagtgacgat aaaaccgatg gtccacagca tcgcagaatg gaacacgata cggccctgat
    18421 acatggtgaa cagccagttg aaggtcttca ccccggtcgg gatggcgata atcattgtgg
    18481 tgataccaaa gaaggcgttt acgttcgcgc ccgcacccat cgtaaagaag tggtgcagcc
    18541 aaacgatgaa cgacagcacg gtgatacaga cggttgccca taccagcgag gtataaccaa
    18601 acagacgttt acgcgagaag gttgccgcaa tttcggagaa cacaccgaaa acaggctgga
    18661 tcaggatgta aacttccggg tggccccagg cccaaatcag gttgatgtac atcatcatgt
    18721 tgccacccat atcgttggta aagaaatggg tgcccagata gcgatccagg gtcaacaacg
    18781 cgacggtaac cgtcagaatt gggaaggaag caataatcag tacgttcgcg cacagtgatg
    18841 cccaggtaaa tactggcatc ttgaacatgg tcatgcccgg tgcgcgcatc ttcagaatgg
    18901 taacgaagaa gttgataccg gtaagcgtcg tacctatacc ggatagctgg agactccata
    18961 tccagtaatc aacaccgact cccggactgt actctattcc cgatagcggt ggataggcca
    19021 gccagccggt ctgcgcaaat tcgcccacgc cgagagaaac gttaaccaga atcacaccaa
    19081 caacagtaaa ccagaagctt aagttgttga ggaacgggaa cgcaacgtca cgcgcgccga
    19141 tctgcagcgg aaccaccagg ttcatcagac cgataacgaa aggcatcgcc acgaagaaga
    19201 tcataatcac gccgtgcgcg gtgaagatct gatcgtagtg gtgaggtggc aggaagcccg
    19261 cttcgcccgc cgaggcaaga gcctgctggc tacgcatcat aatggcgtca gcaaaaccac
    19321 gcagcaacat cacaatcgcc acgatgatat acatgatacc gaggcgttta tggtcgacgg
    19381 aggtcagcca ctctttccac aggtaggtcc acttaccgaa gtaagtgatc aggccaacga
    19441 gcgccagacc tcccaaaata atgccagcga tcgtaaccat gacgataggt tcatggaacg
    19501 ggactgcatc aagtgataat tttccgaaca tctttattct tcctcaaccc ctttaatggg
    19561 cggattccgc gtggctcatg tccatgcttt ccataccttc gtgtgcgctg tgctcacctt
    19621 ctggctgggt catgtccatg ctcttaccgt gagccataaa cttgttaatc acatcagcaa
    19681 acaagtctgg tttcacgttg gagaaatatt ccacctggtt gtattcgcta ggcgcggcca
    19741 gtttttcgaa cgcagccatg tcagacatgg tgttcggcga ctgcttcgct tttgcgaccc
    19801 actggtcgaa ttcggcgcga tccggtgttg caatagcttt gaacttcatg cctgagaagc
    19861 ccgggccgct gtagctggcg gagataccgt cataagtacc gggttcgttg gcgatcagat
    19921 gcaggcgagt ctgcatacca gccatggcat aaatctggct acccagacgc ggaatgaaga
    19981 aggagttcat cacggagttg gaggtcactt tgaagtacac cggagtgttc gccgggaaag
    20041 cgatttcatt cacggtagca atgccctgtt ccgggtagat gaagaaccat ttccagtcca
    20101 tggaaaccac ttcgatggta atgggcttct cgtcgtgtgc cagcggcttg ctaggctcaa
    20161 gagcgtgagt ggttttccag gtcagtaccg caaggaagat gatgattaag ataggtaccg
    20221 tccagaccac agcttccact ttattggagt gtgaccagtt cgggctgtac ttagcatctt
    20281 tattgctcgc acgatacttc caggcgaaac caacagccat caagattgcg ggaataacga
    20341 caatcaacat caggccaaat gccgtcagta tcagtgaacg ttgctccaga ccaatctgtc
    20401 ctttgggatc taacagcgca gaattacagc cactgagcaa tacagtgcct gcaaataatg
    20461 acaaccatcc caaactttta ttgtatttcc tgagtctcat ttaacgacct caattccacg
    20521 ggatctggtg gcgtttaaag tgtgtgggcg ttttacggga aggttacatt actgtaaaca
    20581 tgattaaatt cctgttactt ggatttggct gtcaggtcac atatgttgca aaacatatca
    20641 agttgatttt aagaagctgt tgcaaaaggg cgttataacg aaaggggagt gcagaaggag
    20701 tttggacggg caattggtat aaccaatctg gaataaaata attgtttaac aaataattat
    20761 cattatggtg acaattgggt ggggggaaaa taaagactcg ttagctgaat cgtgtaagaa
    20821 aaaatagaat tcataaattg cgtcaataat ttccaaacgc taagccgcac aaaagaacaa
    20881 atattattaa gcgatactga tgtttattta gccgtaataa ttacggcgag tgattactac
    20941 agctaaataa tatttacaga ttacgtcaga tgcgtttttc gtagagccag ataatccagc
    21001 aaaccaccaa gcacgacgcc agaaagggcg actaaaaccc cgacttccag cagagcaggc
    21061 aggaaagaga agtgcgtcaa atccagcgcg tccatcgtca acagcagtaa ccacacggcc
    21121 aacaggctga cgcccgccgc cagtgtccac atggcaaagg cataacctgc cggatattcg
    21181 gtacgggaga taaagttgtc atttactcgt gtatattcaa gcgtctggcg gcaaaccagc
    21241 agcaaaataa gccccggtac ggcagcggcg acggagaata gatagaatgt cgaccagccg
    21301 tgtgcttcaa caaaccaacc cgccacgggg ccgacataaa ctcgtcctac agcggaaagc
    21361 gctgagagca gggcaaattg agtagcggaa aatgacttat tacacagcgt cattaacagc
    21421 gcgacaaagg ctgatgtgcc catcccgcca cagaggtttt cgaaaaagac ggctgcgccc
    21481 atgctgtaga gatgcttatc agtaatcgac agcagccagt aaccagcgtt agacgcacct
    21541 tgtaaaatgc cgaaaatcag cagcgcccgg aacagcgaca ggcgctgcat caaaatccca
    21601 ccgtacaatg cgcccacaat ggtcgccagt aagccaagcg ttttgttaac cacgcctact
    21661 tcacccgcat caaacccgac gccgcgaatc aaaaacgtgg ttgtcaggct catggcgaat
    21721 gcgtcgccca gcttatacag cacgataaga agcaaaataa gccaggcatt attgcgacca
    21781 aagaaatctc gcagaggtgc aacaaccgct tgttccagcg tttttggcac aggaatggtg
    21841 tcggtcggtt ctggtgcaag caacgtcgcg ataatacaag ggatcaacag cgccgccatc
    21901 aaccagtaca tgccctgcca gcccagccat ttatctgcca gccacagggc taagccgccg
    21961 gaaaccagca tccctaaacg gtaacccagc acgctgattg ccgcgcccgc accacgttct
    22021 tctgccggga gcacatcggt tttccacgca tcgaagacaa tatcctggga ggccgagcaa
    22081 aaagcgatca ccaccgccag tgccgccatc cagcggagtt gggtgccagg ttcgagaaaa
    22141 cccatcgccg caatggcgac taataacagg atttgcgtgg cgagcagcca accgcgccgc
    22201 cgcccaaaaa atgggggcgt gtagcggtcc atcagcggtg accagaggaa tttaaaaacg
    22261 taagcctggc ctaccagaga gaagaaacca atggttttga gatcaatatt ctcgaccgtc
    22321 atccaggcct gtaaggtacc ggatgtcagg gcgagcggta gcccggaagc aaaacccagg
    22381 atcagcaata tggctgaacg cggctgttga aaaatacgta aatattgact ggacatgggc
    22441 gtctacaggc ccggtttgca ccgggccaga gggcagaaat taacgcgcgt tctgcttgat
    22501 gaattcgtga atgctggtgt cctgagacat atcagcgatg gtatcggtca gcacactgtt
    22561 aaccgcatcg gcgatatttt tgttggaggc ctggaacgca ccttcaacgt tgtagctggc
    22621 acgatagttt ttggttattt tgttgccatt ctgcgcggta gcgatgatgg cgatatccgc
    22681 tttggtagcg atgttgtagc gcacgttgcc ctgggacacg tcagcataca gttggctaac
    22741 gatgatttgc agattaaccg ggccattcgg accaaccatg taaccacgcg cggtcatctg
    22801 tttttccagc acttcttgca gcaggaaacg cagatcgcgg gaggcggtca gggtaacgat
    22861 ttgattatcg cgggtgactt ttgccagcgc ctgatcggta cgctgatcgg caccattaat
    22921 gcttacggtg acgcccatca ggcttggatc ctgctgtggc agtgtaatcg tcggggaaat
    22981 ttcaatagtt gttggcggtt ttgcgcatcc tgcaagcata aacagagcaa ctaacgggaa
    23041 gaggattttt ttgaacatgt tcgggctctc agagactctt aagcgtgttt ggtaaaaatt
    23101 cccgccatca taacattgcc aacggcgagg ggaagtgggt aaggcatgta aattcatcat
    23161 gttgacgaaa taatcactcc tggtaaaaga aacgctgatg cgaggcctgt gtttcaatct
    23221 ttaaatcagt aaacttcata cgcttgacgg aaaaaccagg acgaaaccta aatatttgtt
    23281 gttaagctgc aatggaaacg gtaaaagcgg ctagtattta aagggatgga tgacatctca
    23341 gcgttgtcgg aggagatatt tcatgatgat acgtgagcgg atagaagaaa aattaagggc
    23401 ggcgttccaa cccgtattcc tcgaagtagt ggatgaaagc tatcgtcaca atgtcccagc
    23461 cggctctgaa agccatttta aagttgtgct ggtcagcgat cgttttacgg gtgaacgttt
    23521 tctgaatcgt catcgaatga tttacagtac tttagcggag gaactctcta ctaccgttca
    23581 tgcgctggct ctgcatactt acactattaa ggagtgggaa gggttgcagg acaccgtctt
    23641 tgcctctcct ccctgtcgtg gagcaggaag catcgcgtaa aaacgcattt gcaactgtcg
    23701 gcgctttttc agtatgttgc taaagatttt atgaaaaacg gcctgcgggc cgttttgttt
    23761 tgtctggatt ttgcgctttt tgcccagcat tcagacgaaa attgcccggg aattgtgaaa
    23821 aaatacgcga cagcgcgcaa taaccgttct cgactcataa aagtgatgcc gctataatgc
    23881 cgcgtcctat ttgaatgctt tcgggatgat tctggtaaca gggaatgtga ttgattataa
    23941 gaacatcccg gttccgcgaa gccaacaacc tgtgcttgcg gggtaagagt tgaccgagca
    24001 ctgtgatttt ttgaggtaac aagatgcaag tttcagttga aaccactcaa ggccttggcc
    24061 gccgtgtaac gattactatc gctgctgaca gcatcgagac cgctgttaaa agcgagctgg
    24121 tcaacgttgc gaaaaaagta cgtattgacg gcttccgcaa aggcaaagtg ccaatgaata
    24181 tcgttgctca gcgttatggc gcgtctgtac gccaggacgt tctgggtgac ctgatgagcc
    24241 gtaacttcat tgacgccatc attaaagaaa aaatcaatcc ggctggcgca ccgacttatg
    24301 ttccgggcga atacaagctg ggtgaagact tcacttactc tgtagagttt gaagtttatc
    24361 cggaagttga actgcagggt ctggaagcga tcgaagttga aaaaccgatc gttgaagtga
    24421 ccgacgctga cgttgacggc atgctggata ctctgcgtaa acagcaggcg acctggaaag
    24481 aaaaagacgg cgctgttgaa gcagaagacc gcgtaaccat cgacttcacc ggttctgtag
    24541 acagcgaaga gttcgaaggc ggtaaagcgt ctgatttcgt actggcgatg ggccagggtc
    24601 gtatgatccc gggctttgaa gacggtatca aaggccacaa agctggcgaa gagttcacca
    24661 tcgacgtgac cttcccggaa gaataccacg cagaaaacct gaaaggtaaa gcagcgaaat
    24721 tcgctatcaa cctgaagaaa gttgaagagc gtgaactgcc ggaactgact gcagaattca
    24781 tcaaacgttt cggcgttgaa gatggttccg tagaaggtct gcgcgctgaa gtgcgtaaaa
    24841 acatggagcg cgagctgaag agcgccatcc gtaaccgcgt taagtctcag gcgatcgaag
    24901 gtctggtaaa agctaacgac atcgacgtac cggctgcgct gatcgacagc gaaatcgacg
    24961 ttctgcgtcg ccaggctgca cagcgtttcg gtggcaacga aaaacaagct ctggaactgc
    25021 cgcgcgaact gttcgaagaa caggctaaac gccgcgtagt tgttggcctg ctgctgggcg
    25081 aagttatccg caccaacgag ctgaaagctg acgaagagcg cgtgaaaggc ctgatcgaag
    25141 agatggcttc tgcgtacgaa gatccgaaag aagttatcga gttctacagc aaaaacaaag
    25201 aactgatgga caacatgcgc aatgttgctc tggaagaaca ggctgttgaa gctgtactgg
    25261 cgaaagcgaa agtgactgaa aaagaaacca ctttcaacga gctgatgaac cagcaggcgt
    25321 aatttacgca gcataacgcg ctaaattcgc acaaaggccc gtcaccgcca ggtggtgggc
    25381 ttttttttgt catgaatttt gcatggaacc gtgcgaaaag cctctttcgg tgttagcgta
    25441 acaacaaaag attgttatgc ttgaaatatg gtgatgccgt acccataaca cagggactag
    25501 ctgataatcc gtccataagg ttacaatcgg tacagcaggt tttttcaatt ttatccagga
    25561 gacggaaatg tcatacagcg gcgaacgaga taactttgca ccccatatgg cgctggtgcc
    25621 gatggtcatt gaacagacct cacgcggtga gcgctctttt gatatctatt ctcgtctact
    25681 taaggaacgc gtcatttttc tgactggcca ggttgaagac cacatggcta acctgattgt
    25741 ggcgcagatg ctgttcctgg aagcggaaaa cccagaaaaa gatatctatc tgtacattaa
    25801 ctccccaggc ggggtgatca ctgccgggat gtctatctat gacaccatgc agtttatcaa
    25861 gcctgatgtc agcaccatct gtatgggcca ggcggcctcg atgggcgctt tcttgctgac
    25921 cgcaggggca aaaggtaaac gtttttgcct gccgaattcg cgcgtgatga ttcaccaacc
    25981 gttgggcggc taccagggcc aggcgaccga tatcgaaatt catgcccgtg aaattctgaa
    26041 agttaaaggg cgcatgaatg aacttatggc gcttcatacg ggtcaatcat tagaacagat
    26101 tgaacgtgat accgagcgcg atcgcttcct ttccgcccct gaagcggtgg aatacggtct
    26161 ggtcgattcg attctgaccc atcgtaattg atgccagagg cgcaactgtg ccgctatact
    26221 tatccagggc ggcacaacgc tgtaagcggc ttgcgcctga gaatggcatt tgcgtcgtcg
    26281 tgtgcggcac aaagaacaaa gaagaggttt tgacccatga cagataaacg caaagatggc
    26341 tcaggcaaat tgctgtattg ctctttttgc ggcaaaagcc agcatgaagt gcgcaagctg
    26401 attgccggtc catccgtgta tatctgcgac gaatgtgttg atttatgtaa cgacatcatt
    26461 cgcgaagaga ttaaagaagt tgcaccgcat cgtgaacgca gtgcgctacc gacgccgcat
    26521 gaaattcgca accacctgga cgattacgtt atcggccagg aacaggcgaa aaaagtgctg
    26581 gcggtcgcgg tatacaacca ttacaaacgt ctgcgcaacg gagataccag caatggtgtc
    26641 gagttgggca aaagtaacat tctgctgatc ggtccgaccg gttccggtaa aacgctgctg
    26701 gctgaaacgc tggcgcgcct gctggatgtt ccgttcacca tggccgacgc gactacactg
    26761 accgaagccg gttatgtggg tgaagacgtt gaaaacatca ttcagaagct gttgcagaaa
    26821 tgcgactacg atgtccagaa agcacagcgt ggtattgtct acatcgatga aatcgacaag
    26881 atttctcgta agtcggacaa cccgtctatt acccgtgacg tttccggtga aggcgtacag
    26941 caggcactgt tgaaactgat cgaaggtact gttgctgccg ttccaccgca gggcgggcgt
    27001 aagcatccgc agcaggaatt tttgcaggtt gatacctcca agatcctgtt tatttgtggc
    27061 ggtgcgtttg ccggtctgga taaagtgatt tcccaccgtg tagaaaccgg ctccggcatt
    27121 ggttttggcg cgacggtaaa agcgaagtcc gacaaagcaa gcgaaggcga gctgctggcg
    27181 caggttgaac cggaagatct gatcaagttt ggtcttatcc ctgagtttat tggtcgtctg
    27241 ccggttgtcg caacgttgaa tgaactgagc gaagaagctc tgattcagat cctcaaagag
    27301 ccgaaaaacg ccctgaccaa gcagtatcag gcgctgttta atctggaagg cgtggatctg
    27361 gaattccgtg acgaggcgct ggatgctatc gctaagaaag cgatggcgcg taaaaccggt
    27421 gcccgtggcc tgcgttccat cgtagaagcc gcactgctcg ataccatgta cgatctgccg
    27481 tccatggaag atgtcgaaaa agtggttatc gacgagtcgg taattgatgg tcaaagcaaa
    27541 ccgttgctga tttatggtaa gccggaagcg caacaggcat ctggtgaata attaaccatt
    27601 cccatacaat tagttaacca aaaagggggg attttatctc ccctttaatt tttcctctat
    27661 tctcggcgtt gaatgtgggg gaaacatccc catatactga cgtacatgtt aatagatggc
    27721 gtgaagcaca gtcgtgtcat ctgattacct ggcggaaatt aaactaagag agagctctat
    27781 gaatcctgag cgttctgaac gcattgaaat ccccgtattg ccgctgcgcg atgtggtggt
    27841 ttatccgcac atggtcatcc ccttatttgt cgggcgggaa aaatctatcc gttgtctgga
    27901 agcggcgatg gaccatgata aaaaaattat gctggtcgcg cagaaagaag cttcaacgga
    27961 tgagccgggt gtaaacgatc ttttcaccgt cgggaccgtg gcctctatat tgcagatgct
    28021 gaaactgcct gacggcaccg tcaaagtgct ggtcgagggg ttacagcgcg cgcgtatttc
    28081 tgcgctctct gacaatggcg aacacttttc tgcgaaggcg gagtatctgg agtcgccgac
    28141 cattgatgag cgggaacagg aagtgctggt gcgtactgca atcagccagt tcgaaggcta
    28201 catcaagctg aacaaaaaaa tcccaccaga agtgctgacg tcgctgaata gcatcgacga
    28261 tccggcgcgt ctggcggata ccattgctgc acatatgcca ctgaaactgg ctgacaaaca
    28321 gtccgttctg gagatgtccg acgttaacga acgtctggaa tatctgatgg caatgatgga
    28381 atcggaaatc gatctgctgc aggttgagaa acgcattcgc aaccgcgtta aaaagcagat
    28441 ggagaaatcc cagcgtgagt actatctgaa cgagcaaatg aaagctattc agaaagaact
    28501 cggtgaaatg gacgacgcgc cggacgaaaa cgaagccctg aagcgcaaaa tcgacgcggc
    28561 gaagatgccg aaagaggcaa aagagaaagc ggaagcagag ttgcagaagc tgaaaatgat
    28621 gtctccgatg tcggcagaag cgaccgtagt gcgtggttat atcgactgga tggtacaggt
    28681 accgtggaat gcgcgcagca aggtcaaaaa agacctgcgt caggcgcagg aaatccttga
    28741 taccgaccat tatggtctgg agcgcgtgaa agatcgcatc cttgagtacc ttgcggttca
    28801 aagccgtgtc aacaaaatca agggaccgat cctctgcctg gtagggccgc cgggggtagg
    28861 taaaacctct cttggtcagt ccattgccaa agccaccggg cgtaaatatg tccgtatggc
    28921 gctgggcggc gtgcgtgatg aagcggaaat ccgtggtcac cgccgtactt acatcggttc
    28981 tatgccgggt aaactgatcc agaaaatggc gaaagtgggc gtgaaaaacc cgctgttcct
    29041 gctcgatgag atcgacaaaa tgtcttctga catgcgaggc gatccggcct ctgcactgct
    29101 tgaagtgctg gatccagagc agaacgtagc gttcagcgac cactacctgg aagtggatta
    29161 cgatctcagc gacgtgatgt ttgtcgcgac gtcgaactcc atgaacattc cggcaccgct
    29221 gctggatcgt atggaagtga ttcgcctctc cggttatacc gaagatgaaa aactgaacat
    29281 cgccaaacgt cacctgctgc cgaagcagat tgaacgtaat gcactgaaaa aaggtgagct
    29341 gaccgtcgac gatagcgcca ttatcggcat tattcgttac tacacccgtg aggcgggcgt
    29401 gcgtggtctg gagcgtgaaa tctccaaact gtgccgcaaa gcggttaagc agttactgct
    29461 cgataagtca ttaaaacata tcgaaattaa cggcgataac ctgcatgact acctcggtgt
    29521 tcagcgtttc gactatggtc gcgctgataa cgaaaactgt gtcggtcagg taaccggtct
    29581 ggcgtggacg gaagtgggcg gtgacttgct gaccattgaa accgcatgtg ttccgggtaa
    29641 aggcaaactg acctataccg gttcgctcgg cgaagtgatg caggagtcta ttcaggcggc
    29701 gttaacggtg gttcgtgcgc gtgcggaaaa actggggatc aaccctgatt tttacgaaaa
    29761 aagtgacatc cacgtccacg taccggaagg tgcgacgccg aaagatggtc cgagtgccgg
    29821 tattgctatg tgcaccgcgc tggtttcttg cctgaccggt aacccggttc gtgccgatgt
    29881 ggcaatgacc ggtgagatca ctctgcgtgg tcaggtactg ccgatcggtg gtttgaaaga
    29941 aaaactcctg gcagcgcatc gcggcgggat taaaacagtg ctaattccgt tcgaaaataa
    30001 acgcgatctg gaagagattc ctgacaacgt aattgccgat ctggacattc atcctgtgaa
    30061 gcgcattgag gaagttctga ctctggcgct gcaaaatgaa ccgtctggca tgcaggttgt
    30121 gactgcaaaa tagtgacctc gcgcaaaatg cactaataaa aacagggctg gcaggctaat
    30181 tcgggcttgc cagccttttt ttgtctcgct aagttagatg gcggatcggg cttgccctta
    30241 ttaaggggtg ttgtaagggg atggctggcc tgatataact gctgcgcgtt cgtaccttga
    30301 aggattcaag tgcgatataa attataaaga ggaagagaag agtgaataaa tctcaattga
    30361 tcgacaagat tgctgcaggg gctgatatct ctaaagctgc ggctggccgt gcgttagatg
    30421 ctattattgc ttccgtaact gaatctctga aagaagggga tgatgtagca ctggtaggtt
    30481 ttggtacttt tgccgttaaa gagcgtgctg cccgtactgg ccgcaacccg cagaccggta
    30541 aagagatcac catcgctgct gctaaagtac cgagcttccg tgcaggtaaa gcactgaaag
    30601 acgcggtaaa ctaagcgttg tccccggtgg ggatgtgacg aagttcaagg gcgcatctac
    30661 tgatgtgcct tttttatttg tattcggtga ctttctgcgt cttgtgggct gacaattgcc
    30721 cccgtttctt gtcacaatag gcctttgcgc gcatcgatac gttgcgtgag gtacacagtc
    30781 atctacagcg gagtgttgtt acaccatgat ggacagctta cgcacggctg caaacagtct
    30841 cgtgctcaag attattttcg gtatcattat cgtgtcgttc atattgaccg gcgtgagtgg
    30901 ttacctgatt ggcggaggca ataactacgc cgcaaaagtg aatgaccagg aaatcagccg
    30961 tgggcagttc gagaacgcct ttaacagcga gcgtaatcgc atgcagcaac agctgggcga
    31021 tcaatactcc gagctggcag cgaatgaagg ctatatgaaa accctgcgtc aacaggtgct
    31081 gaatcgtctg atcgacgagg cgctgttgga tcagtacgct cgtgagctga aactgggtat
    31141 cagtgatgag caggttaaac aggcgatttt cgcgacccca gccttccagg ttgatggcaa
    31201 atttgataac agccgctata acggtatcct caaccagatg gggatgaccg ccgatcagta
    31261 cgcccaggcg ctgcgtaacc agctcactac ccaacagctg attaacggtg ttgccggtac
    31321 cgattttatg ctgaaaggtg aaaccgacga gctggcggca ctggtcgcgc aacaacgcgt
    31381 ggtgcgtgag gcgactatcg atgttaacgc gctggcggcg aagcagcctg tgaccgaaca
    31441 ggagattgcc agctactacg aacaaaacaa aaacaatttc atgacgccgg aacaattccg
    31501 cgtgagttac atcaagctgg atgccgcaac gatgcagcaa ccggttagcg atgcggatat
    31561 ccagagctac tacgatcagc atcaggatca attcacccag ccgcagcgta cccgctacag
    31621 catcatccag accaaaactg aagatgaagc gaaagcggta cttgatgagc tgaataaagg
    31681 cggtgatttt gctgcattag ccaaagaaaa atctgccgat attatctctg cccgtaacgg
    31741 cggcgatatg ggttggttag aagatgccac tatccccgac gaactgaaaa atgctggtct
    31801 aaaagaaaaa ggccaactgt ctggtgtcat caaatcttcg gtcggtttcc tgattgtacg
    31861 tctggacgac attcatccag cgaaagtgaa atcgttagac gaagtacgtg acgacattgc
    31921 ggcgaaagtg aaacacgaaa aagccctcga tgcgtactat gcgctgcagc agaaagtgag
    31981 cgatgcggca agcaacgaca ccgagtctct ggccggtgca gagcaagctg ccggcgttaa
    32041 agccactcag acgggttggt tcagcaaaga taacctgccg gaagagttga acttcaagcc
    32101 ggttgccgac gctatcttta acggcggtct ggtaggtgaa aacggcgcgc cgggcatcaa
    32161 ctctgacatc atcaccgtag acggcgaccg tgcattcgtg ctgcgcatca gcgagcacaa
    32221 accggaagcg gtgaaaccgt tggcagatgt tcaggaacaa gttaaggcac tggttcagca
    32281 caacaaagct gaacaacagg cgaaagtgga tgctgagaaa ctgctggttg atttgaaagc
    32341 cggcaaaggt gcggaagcta tgcaggctgc cggtctgaaa tttggcgagc cgaaaacctt
    32401 aagccgttcc ggtcgtgacc cgattagcca ggcggcgttt gcactgccac tgccagcgaa
    32461 agacaaaccg agctacggta tggcgaccga tatgcaaggt aatgtggttc tgctggcgct
    32521 ggatgaagtg aaacaaggtt caatgccgga agatcagaaa aaagcgatgg tgcagggtat
    32581 cacccagaac aacgcacaaa tcgtctttga agctctgatg agtaacctgc gtaaagaggc
    32641 gaaaatcaaa attggcgatg cgctggaaca gcaataatcc tgaagacgcc tcgcaaaaaa
    32701 atgcgttgca gctgtaacaa gaaaaggtcg ctttcgcggc cttttccatt tctgaacatt
    32761 gccatttgtt tactgttttc actgccgtta aggtgattcc actgttaaca aacaaggaga
    32821 aaacagtatg aaacacggaa ttaaagcact gctcattacc ctgtccctgg cctgtgccgg
    32881 aatgtctcat agcgcgctgg cggcagcttc tgtggcgaaa ccgacggcgg tagaaaccaa
    32941 agcggaagct cctgcagcac aaagtaaagc agcagtaccg gcgaaagcca gtgacgaaga
    33001 aggcacccgg gtcagcatta ataatgccag cgcggaagag ctagcccgcg cgatgaatgg
    33061 cgttggcctg aagaaagcgc aggcgattgt cagttatcgc gaagagtacg gtccgtttaa
    33121 aacagtggag gatctaaagc aggtgccggg gatgggcaat tcgctggtgg aacgtaatct
    33181 ggcggtatta accctgtaat taatttgcat agtggcaatt ttttgccaga ctgaagaggt
    33241 cataccagtt atgacctctg tacttataac aacaacgtaa ggttattgcg ctatgcaaac
    33301 acaaatcaaa gttcgtggat atcatctcga cgtttaccag cacgtcaaca acgcccgcta
    33361 ccttgaattt ctcgaagaag cccgctggga tgggttggaa aatagcgaca gttttcagtg
    33421 gatgacggcc cataacatcg ccttcgtcgt ggtcaatatc aatattaact atcgtcgccc
    33481 agcggtatta agtgacctgt taactattac cagtcagttg cagcaattaa acggtaaaag
    33541 cggcatctta agccaggtca ttacactgga gccggaaggg caggtggtag cggatgcgct
    33601 tattacgttt gtttgtattg atcttaaaac gcagaaagca ttagctctgg aaggggaatt
    33661 gcgcgaaaag ctggagcaga tggttaagta aacgttttgt ggtgccggat gctcaagccg
    33721 catccggcga cacccggaat aattacctca acccggtttt ctgcttcatc gctgccatca
    33781 ccgtcggttt atcggccaga taatgattca aaccgttggc gcgtaaatta catgccgcac
    33841 aatgaccgca accgtcgcct ttaatgccgt tatagcaggt caacgtttcg ttacggacta
    33901 aatccagttt gccgtaataa tctgccagcg cccaggtttc cgctttatca atccacatca
    33961 gcggcgtttc aaaacgaata tctttcgcca tgcccaaact gacggcatgg tttagtgctt
    34021 tcacaaactc atcgcggcaa tccgggtagc cggagaaatc cgtttcacag acgccggtaa
    34081 ttacggcttc tgcttttacc tgatacgcat atattgccgc cagcgtcagg aacaaaatat
    34141 tacgccctgg gacaaacgta ttcgggatgc catcggcttc aggttcataa tcaggcaccg
    34201 gaatgctgtc acgtgtcagg ctgctgaccg ccagctcgtt gagcagcgtt acatcaagaa
    34261 ccttatgcgc gcgtgctccc agtttcagcg ccagttcgcg tgccacgtcg atttctgcgc
    34321 gatgtcgctg accgtaatcg aacgtcacgc aatggacttc atcatattgt tgtaatgcct
    34381 gcaccagaca ggtggtggaa tcctggcctc cactgaacac aacgacagca cgtttcatag
    34441 ataatcctgc ttgaacaata aaagcgttat ggtaacgcct gcgattaacc cggaccagct
    34501 attcattgcg acggcgcggg aagccaggct tcggtaaatt caaaccagcc gcgcggtgtc
    34561 agtcgcacac cgttcacgcc gggaggggca ctaatgcgat agtgatagtt gaacagcggc
    34621 gtcagcgtcg cgtctgccat taactggcta aaaaccgctt tcagggcatt aaatcggttt
    34681 tcctcatcag gcattacttg caccgcgtcc agcgtcgatt gcagatgtgc atatgctgga
    34741 gcgtcgaaaa catgtggcca tagtggatcg caacgtagcc attgctccag agtatattcc
    34801 ggtgcttcgc caattaatct gtcgcccatc atgaggtctg cgtgtgccag tagggtcgtg
    34861 tcgtcccagt tttttgcgtt atgaaaaata attgtgagtt cacagccttc cgctgccagt
    34921 gtcgcctgta ggcgttctgc catggtatga agttctatcg gtaggtgata aaccagcgtc
    34981 aaggttttcg gtagtttgac ttcatccggt acttgccagt gcggaatagt ccagcctggc
    35041 agtaatgcat gactggcggt gatcaggttt tctccgactt ctaacgtttg taataaaccg
    35101 gattgatgaa taatggagat cacttttcgc gcctgccaga gggagagtcg gggacttttg
    35161 cgcaacgtta aatagcaaaa acctaaactg atgccactac tgacctggct gacccgttgc
    35221 agctcctccg gtttgccgat ggtgatttgc acgggatgcc gacaactggt tcccaaatct
    35281 ttttcgaaaa gcggcggagt tatccagtac tcaaccgctt taagcagcgg atgacgcaaa
    35341 tggtaataat catggctctc caggcgcacc agctccgctg tgaattgtgt taagcgaaaa
    35401 ggaccagtgc cgatcagtgg gaattgcgga tgcgccagat ggctgcaata gctcgccagc
    35461 cggtgcgcaa gccagtaatc ggggcgatgt aaaaagaagg tcagacactg cggatgggtg
    35521 acttcaatac gcttcacgct aataaataat tgatccagtg ctggcagttg taacagcatc
    35581 aataatcgct ggtgtaagtg tgaggctttt actgcatcgc cgttatgcca gtgtagggtt
    35641 gaacgaagat aaaagtccca gcgtaacccg tcagtagagg tttcccagtg atgcgctaaa
    35701 tcgccaatcg ggcgctgagt attattatcg aagcgggtca ggccggaaaa tatctgcccg
    35761 gcgagatgct gctcggcacg gccgggcaaa aagcctggtt gtagcggttc gagcgggcga
    35821 tagtagggaa tacgcaacgt gggtgtatcg ttttgccatt gtccgcccat aaacggctgt
    35881 aacagagtgc gtagctcacc tggggccagt tgcgccagct ccagcacatc ttgctgcttt
    35941 ccggtttcca gtgcctgttc catcatcgca ttgcgtagcg attccggcgt gaccagaaag
    36001 cgtaattgtc cgcgctttcc gcgtcctgac tgcgcctgcc actccagcca tcccgcctcc
    36061 tgtgcctgac gcaacagcgt acgaacatgg cgttcgctgc aaaaacagcg ttcggccagt
    36121 tcgctgacgg tgacggtttg cggctttccg gctgaaggtt gccacagacg ttgatactgg
    36181 ttaagacggt tgagcaatcg catataaacc cggaacaata ttatttaact attcactatt
    36241 acttccgtat atatcaggtg atactcaatc tccattaacc gtgtcacaga gtggagaaag
    36301 aaatggctcg tctggcagca tttgatatgg atggcacttt attgatgcct gaccatcatt
    36361 taggtgagaa aaccctctct actttggcgc gactgcgtga acgcgacatt accctcactt
    36421 ttgccacggg gcgtcatgcg ctggagatgc agcatattct cggggcacta tcgctggatg
    36481 catatttgat taccggcaac ggaacgcgcg tgcattctct ggaaggtgaa cttttacatc
    36541 gtgatgattt acctgcggat gtcgcggagc tggtgctgta tcagcaatgg gatacccgag
    36601 ccagcatgca tatcttcaat gacgacggtt ggtttaccgg gaaagagatc cctgcgttgt
    36661 tgcaggcatt tgtctatagc ggttttcgtt atcagataat cgatgtcaaa aaaatgccac
    36721 tcggcagcgt caccaagatc tgcttctgtg gcgatcacga cgatcttaca cgcttgcaga
    36781 tccagctata cgaagcatta ggcgagcgtg cacatttgtg tttttccgcc acggattgcc
    36841 tcgaagtact gccggtgggc tgcaataaag gcgctgcatt gacggtgctg acccaacatt
    36901 taggtttatc gttgcgcgat tgcatggcct ttggtgatgc gatgaacgat cgcgaaatgt
    36961 taggcagcgt cggtagcggg tttattatgg gcaatgcgat gccgcaactg cgcgcggagc
    37021 tcccgcattt accggtgatt ggacattgcc gaaatcaggc tgtctctcac tatttgacgc
    37081 actggctgga ctatccacat ctaccttatt cccccgaata atgagatccc ttccagcacc
    37141 gggcaattgc ccggtttttt ttgcgttgaa tttgtcattt tgtgccgtgg tgtttaaacc
    37201 gcacagaata aattgtcgtg atttcacctt taaaatagaa ttaaaagaga aaaaaattct
    37261 ctgtggaagg gctatgttag ataaaattga ccgtaagctg ctggccttac tgcagcagga
    37321 ttgcaccctc tctttgcagg cactggctga agccgttaat ctgacaacca ccccttgctg
    37381 gaagcgcctg aaacggctgg aggacgacgg tatccttatc ggcaaagtcg ccctgctgga
    37441 tccggaaaaa ataggcctcg gcctgaccgc ctttgtgctg ataaaaacgc aacatcacag
    37501 cagcgaatgg tattgccgct ttgtcacggt ggttaccgaa atgccagaag tgctggggtt
    37561 ctggcgcatg gctggtgaat acgattatct gatgcgcgtc caggttgccg acatgaaacg
    37621 ctacgacgag ttttataagc gtctggtaaa cagcgtgccg gggctgtcgg acgtcacttc
    37681 cagcttcgcg atggaacaga ttaaatacac cacttcttta cccatcgaat aaatatccag
    37741 aatcaggtca ggacacaacg cgtgcgatta tttgctcaat taagctggta tttccgtcgg
    37801 gaatggcgtc gctatctcgg ggctgtcgcc ttgcttgtca ttatcgcgat gctgcaactg
    37861 gttccgccaa aagtggttgg tattgttgtc gatggcgtga cagaacaaca ctttactacc
    37921 gggcagatcc tgatgtggat cgccaccatg gtgctgattg ccgttgtggt ttatttcctg
    37981 cgttacgtct ggcgggtatt gctgtttggt gcgtcttatc aactggctgt tgaactgcgt
    38041 gaagattatt accgtcagct aagccggcag catcctgagt tttacctgcg tcatcgcacg
    38101 ggtgacctca tggctcgtgc gaccaatgac gtcgatcgcg tcgtgtttgc agccggagaa
    38161 ggggtgctga cgctggtgga ttcactggtg atgggctgcg ctgtgttgat tatgatgtct
    38221 acgcaaatta gctggcagtt gaccttattt gccctgttgc cgatgccagt gatggcgatc
    38281 atgatcaagc gcaacggcga tgccttgcat gaacgcttta agctggcaca ggcggcgttt
    38341 tctagtctta atgaccgcac ccaggaaagc ctcaccagta tccgcatgat caaagccttt
    38401 ggtctggaag atcgccagtc ggcgttattt gccgcggatg ccgaagatac cggcaaaaaa
    38461 aacatgcggg tggcgcgtat tgatgctcgt ttcgacccga ccatctatat cgcgattggt
    38521 atggcgaact tgctggcgat tggcggcggt agttggatgg tggtgcaggg cagtttaacg
    38581 ctgggccagc tcaccagttt tatgatgtat ttaggtctga tgatttggcc aatgctggcg
    38641 ctggcatgga tgtttaacat tgtggaacgt ggtagtgctg catacagccg tattcgcgcg
    38701 atgctggcgg aagcgccggt ggtgaacgat ggtagcgaac ccgtgccgga agggcgtggc
    38761 gaactggatg taaatattca ccagttcacg tatccgcaga ctgaccatcc tgcgctggaa
    38821 aacgtcaatt tcgccctgaa acccggtcag atgctgggta tctgcgggcc gactggttcc
    38881 ggcaaaagta ccctgttgtc gctcattcag cgtcatttcg acgtcagcga gggggatatt
    38941 cgctttcatg atattcctct gacgaagtta caactcgata gctggcgtag ccgcctggcg
    39001 gtagttagcc agacaccgtt ccttttttcc gacaccgtag cgaacaacat cgcgttgggt
    39061 tgcccgaatg ccacccagca agagattgag catgtcgcgc ggttagccag cgtacatgac
    39121 gatattttgc gtctaccgca aggttacgat acagaagtgg gcgagcgcgg cgtgatgctt
    39181 tccggtgggc aaaaacagcg tatctccatt gctcgagcgt tattagtcaa cgcggaaatc
    39241 ctcatccttg atgatgcgct ttcggcggtg gacggacgca cagagcacca gatcctgcat
    39301 aacctgcgtc agtggggaca gggaagaacg gtaatcatca gtgcccatcg cctttcggca
    39361 ctgacggaag ccagtgaaaa tgtaatgaac gcatcccaca caattaaaca cggagcagta
    39421 tgatggttaa aagggtgaaa ctggcaggtg tggagcctcg cagatttccg gcatcatagt
    39481 gcccaatacg ggatgcataa agctccctca gactggagac tccacaaatg aaatatacac
    39541 cggttggcgt tgatatcgca aaacatgtca ttcagattca cttcatcaat gagcacacag
    39601 gtgaagtggt tgataaacag ttgcgtagac aggattttct gacgttcttc ggcaaccgtg
    39661 agccatgcct gattggtatg gaggcctgtg gaggttctca gcactgggca cgggaactga
    39721 caaaacttgg tcataaagtc cggttgttgc aggcccgctt cgttaaggca ttcgtcatgg
    39781 gcaataagaa tgatgtgatg gatgcccggg ctatctggat ggcggttcag cagccgggta
    39841 aagaaatcgc cgtaaaaaca gaagaacagc agtcggtact ggttctgcac cgtacccgca
    39901 tgcaactggt gaagttccgg accgcacaaa ttaatgccct gcacgggacg ttactggagt
    39961 ttggtgaaac catccataaa agccgggcag cgatggagcg ggagttcccc gaagcactgg
    40021 aacggatgaa agagatactg cc
//
LOCUS       DADMHC010000010        40033 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.010, whole genome shotgun sequence.
ACCESSION   DADMHC010000010 DADMHC010000000
VERSION     DADMHC010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 40033)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40033)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40033
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.010"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(208..735)
                     /locus_tag="JNZ57_000419"
     CDS             complement(208..735)
                     /locus_tag="JNZ57_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001762409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8826755.1"
                     /translation="MQHLKNITAGNPKTVAQYQLTKNFDVIWLWSEDGKNWYEEVSNF
                     QEDTIKIVYDENNIIVGITRDASTLNPEGFSVVEVPDITANRRADDSGKWMFKDGAVI
                     KRIYTADEQQQLAESQKATLLSEAESVILPLERAVRLNMATDEERSRLEAWERYSVLV
                     SRVDPANPEWPEMPQ"
     gene            complement(739..2829)
                     /locus_tag="JNZ57_000420"
     CDS             complement(739..2829)
                     /locus_tag="JNZ57_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000104687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8826756.1"
                     /translation="MSTKFKTVITTAGAAKLAAATAPGGRKVNITTMAVGDGGGKLPV
                     PDAGQTGLIHEVWRHALNKISQDKRNSNYIIAELVIPPEVGGFWMRELGLYDDAGTLI
                     AVANMAESYKPALAEGSGRSQTCRMVIIVSSVASVELTIDTTTVMATQDYVDDKIAEH
                     EQSRRHPDASLTAKGFTQLSSATNSTSETLAATPKAVKAAYDLANGKYTAQDATTARK
                     GLVQLSSATNSTSETLAATPKAVKAAYDLANGKYTAQDATTARKGLVQLSSATNSDSE
                     TLAATPKAVKTAYDLANGKYTAQDATTARKGLVQLSSATNSDSETQAATPKAVKSAYD
                     NAEKRLQKDQNGADIPGKDTFTKNIGACRAYSGALSTEAGNWTTAQFIEWLDSRGAFN
                     HPYWMCKGSWSYANNKIITDTGCGNIHLAGAVIEVMGIKSAMTIRITTPTTSSGGGAT
                     SAQFTYINHGDNYAPGWRRDWNRYGDSMSGTINQDSGSQNAYMSTALCSGTRGGKKYL
                     RKFRGGEGDTIWHETVQGGVIRWATGNTDAQEELSLSSAYGLRSRGEITSLSANGLRI
                     AYGNYGFFIRNDGGSTYLMLTASGDKFGTWNGLRPLTINNANGGVSMGHGLSVTGRVN
                     PSDYGNFDSRYVKDVRLGTRVVQTMQKGVMYEKSGHVITGLGIVGEVDGDDPAVFRPI
                     QKYINGTWYNVAQV"
     gene            complement(2840..3370)
                     /locus_tag="JNZ57_000421"
     CDS             complement(2840..3370)
                     /locus_tag="JNZ57_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001285325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HAY8826757.1"
                     /translation="MSDSRLLPTGSSPLEVAAAKACAEIEKTPVSIRDLWNPDTCPAN
                     LLPWLAWAFSVDRRDEKWPEATKRAVIRDAYFIHCHKGTIGAIRRVVEPLGYLINVTE
                     WWETSDPPGTFRLDIGVLESGITEAMYQEMERLIADAKPASRHLIGLNITRDIPGYLF
                     AGGVAYDGDVITVYPG"
     gene            complement(3363..4271)
                     /locus_tag="JNZ57_000422"
     CDS             complement(3363..4271)
                     /locus_tag="JNZ57_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000246670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate assembly protein"
                     /protein_id="HAY8826758.1"
                     /translation="MPIIDLNQLPAPDVVEELDFETILAERKATLISLYPEDQQEAVA
                     RTLTLESEPLVKLLEENAYRELIWRQRVNEAARAVMLACAAGNDLDVIGANYNTARLI
                     ITPADDSTLPPTPAEMESDTDYRLRIQQAFEGLSVAGSVGAYQYHGRSADGRVADISV
                     TSPSPACVTISVLSRENNGVASEDLLAVVRNALNGEDVRPVADRVTVQSAAIVEYQIN
                     ATLYLYPGPESEPIRAAAVKKLEAYITAQHRLGRDIRLSAIYAALHVEGVQRVELAAP
                     LADIVLNSTQASFCTEYRVVTGGSDE"
     gene            complement(4276..4623)
                     /locus_tag="JNZ57_000423"
     CDS             complement(4276..4623)
                     /locus_tag="JNZ57_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005228331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate assembly protein"
                     /protein_id="HAY8826759.1"
                     /translation="MTARYLGMNRSDGLTVTDLEHISQSIGDILRTPVGSRVMRRDYG
                     SLLASMIDQPQTPALELQIKVACYMAVLKWEPRVTLSSVTTARSFDGRMTVTLTGQHN
                     DTGQPLSLTIPVS"
     gene            complement(4620..5249)
                     /locus_tag="JNZ57_000424"
     CDS             complement(4620..5249)
                     /locus_tag="JNZ57_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004999972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HAY8826760.1"
                     /translation="MNAQYNEILRFIRNMIRTGIIVETDLNAGRCRVQTGGMCTDWLQ
                     WLTHRAGRSRTWWAPSVGEQVLILAVGGELDTAFVLPGIYSGDNPAPSASADALHIRF
                     PDGAVIEYEPETSALTVSGIKTASVTASDSVTATVPVVMVKASTRVTLDTPEVVCTNK
                     LITGTLEVQKGGTMRGNIEHTGGELSSNGKVLHTHKHPGDSGGTTGSPL"
     gene            5336..6409
                     /locus_tag="JNZ57_000425"
     CDS             5336..6409
                     /locus_tag="JNZ57_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001764703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8826761.1"
                     /translation="MSTYFFSSETMKELFKDYLVFLNTLTPGTNFESSRNKIIAQAIN
                     FISENPEDWDKKSQYNIAMIGDTFKSFLREKGEDNNSINLIFTCFFRFIIEPSILSPE
                     IESHFSPLRTIKDFALYNYNEFDERSRAQIDFSLRELPLAMVKEVLSSSNVDTYKKYI
                     DSLNEGRQFFEKCDSFLKEQHAKIESIKESLKGYEVAFNFVGLFEGFNSLGKKKESEI
                     MLSRIILIILAIIIPSPLIYYGMHKLPALETTNAATYFMSALPFASVTLIFMYYFRVV
                     LLNHISLRTQIMQIELRKSLCQFIQSYSDYSSEIRKNNPEALSKFEDVVFSNIMLSDD
                     KIPSTFDGIEQIASLINSLKNGK"
     gene            complement(6512..6964)
                     /locus_tag="JNZ57_000426"
     CDS             complement(6512..6964)
                     /locus_tag="JNZ57_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001001795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HAY8826762.1"
                     /translation="MNEFKRFEDRLTGLIESLSPSGRRRLSAELAKRLRQSQQRRVMA
                     QKAPDGTPYAPRQQQSARKKTGRVKRKMFAKLITSRFLHIRASPEQASMEFYGGKSPK
                     IASVHQFGLSEETRKDGKKIEYPARPLLGFTGEDVQMIEEIILAHLNR"
     gene            complement(6957..7424)
                     /locus_tag="JNZ57_000427"
     CDS             complement(6957..7424)
                     /locus_tag="JNZ57_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001406878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8826763.1"
                     /translation="MLKPDSLRRALTDAVTVLKTNPDMLRIFVDNGSIASTLATSLSF
                     EKRYTLNVIVTDFTGDFDLLIVPVLAWLRENQPDIMTTDEGQKKGFTFYADINNDSSF
                     DISISLMLTERTLVSEVDGALHVKNIPEPPPPEPVTRPMELYINGELVSKWDE"
     gene            complement(7387..7560)
                     /locus_tag="JNZ57_000428"
     CDS             complement(7387..7560)
                     /locus_tag="JNZ57_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage lysis protein"
                     /protein_id="HAY8826764.1"
                     /translation="MSLCPMPGSDPQKNGDLSADIRQLENALARCASQVKMIKHCQDE
                     NDAQTRQPAQGAD"
     gene            complement(7532..7957)
                     /locus_tag="JNZ57_000429"
     CDS             complement(7532..7957)
                     /locus_tag="JNZ57_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001585210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysB family phage lysis regulatory protein"
                     /protein_id="HAY8826765.1"
                     /translation="MSKLMIVLVVLLSLAVPGLFLVKHENASLRTSLDRANSVASGQQ
                     TTITMLKNQLHVALTRADKNELAQVALRQELENAAKREALREKTITRLLNENEDFRRW
                     YGADLPDAVRRLHQRPACTDASDCRQRLPESEPLPDAGQ"
     gene            complement(7945..8370)
                     /locus_tag="JNZ57_000430"
     CDS             complement(7945..8370)
                     /locus_tag="JNZ57_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000736575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein lysA"
                     /protein_id="HAY8826766.1"
                     /translation="MKKLSLSQMLNVSLALMLALSLIYPQSVAVNFVAAWAILATVIC
                     VVTGGVGVYATEYVLERYGRELPPESLAVKIVTSLFLQPVPWRRRAAALVVMVATFIA
                     LVAAGWIFTALIYLVASVFFRLIRTACRQRFEGREPCQS"
     gene            complement(8385..8882)
                     /locus_tag="JNZ57_000431"
     CDS             complement(8385..8882)
                     /locus_tag="JNZ57_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016235441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 104 protein"
                     /protein_id="HAY8826767.1"
                     /translation="MPVINTHQNIAAFLDMLAVSEGTANHPLTKNRGYDVIVTGLDGK
                     PEIFTDYSDHPFAHGRPAKVFNRRGEKSTASGRYQQLYLFWPHYRKQLALPDFSPLSQ
                     DRLAIQLIRERGALDDIRAGRIERAISRCRNIWASLPGAGYGQREHSLEKLVTVWRTA
                     GGVPA"
     gene            complement(8882..9163)
                     /locus_tag="JNZ57_000432"
     CDS             complement(8882..9163)
                     /locus_tag="JNZ57_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000123123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HAY8826768.1"
                     /translation="MTAEEKSVLSLFMIGVLIVVGKVLAGGEPITPRLFIGRMLLGGF
                     VSMVAGVVLVQFPDLSLPAVCGIGSMLGIAGYQVIEIAIQRRFKGRGKP"
     gene            complement(9167..9370)
                     /locus_tag="JNZ57_000433"
     CDS             complement(9167..9370)
                     /locus_tag="JNZ57_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000846400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8826769.1"
                     /translation="MKTFALQGDTLDAICVRYYGRTEGVVETVLAANPGLAELGAVLP
                     HGTAVELPDVQTAPVAETVNLWE"
     gene            complement(9370..9879)
                     /locus_tag="JNZ57_000434"
     CDS             complement(9370..9879)
                     /locus_tag="JNZ57_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005228322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HAY8826770.1"
                     /translation="MMTLIIPRKEAPVSGEGTVVIPQPAGDEPVIKNTFFFPDIDPKR
                     VRERMRLEQTVAPARLREAIKSGMAETNAELYEYREQKIAAGFTRLADVPADDIDGES
                     IRVFYYERAVCAMATASLYERYRGVDASAKGDKKADSIDSTIDELWRDMRWAVARIQD
                     KPRCIVSQI"
     gene            complement(9979..10728)
                     /locus_tag="JNZ57_000435"
     CDS             complement(9979..10728)
                     /locus_tag="JNZ57_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001540320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase endonuclease subunit"
                     /protein_id="HAY8826771.1"
                     /translation="MTSPAQRHMMRVSAAMTAQREAAPLRHATVYEQMLVKLAADQRT
                     LKAIYSKELKAAKKRELLPFWLPWVNGVLEQGKGAQDDILMTVMLWRLDTGDIAGALE
                     IARYALKYGLTMPGKHRRTPPYMFTEEVALAAMRAHAAGESVDTRLLTETLELTAAAD
                     MPDEVRAKLHKITGLFLRDGGDAAGALAHLQRATQLDCQAGVKKEIERLERELKPKPE
                     PQPQPKAATRTPRKTRSVTPAKRGRPKKKAS"
     gene            complement(10732..11805)
                     /locus_tag="JNZ57_000436"
     CDS             complement(10732..11805)
                     /locus_tag="JNZ57_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001248534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein, P2 family"
                     /protein_id="HAY8826772.1"
                     /translation="MRQETRFKFNAYLSRVAELNGIDAGDVSKKFTVEPSVTQTLMNT
                     MQESSDFLTRINIVPVSEMKGEKIGIGVTGSIASTTDTAGGTERQPKDFSKLASNKYE
                     CDQINFDFYIRYKTLDLWARYQDFQLRVRNAIIKRQSLDLIMAGFNGVRRAETSDRSS
                     NQMLQDVAVGWLQKYRNEAPARVMSKVTDEEGHTTSEVIRVGKGGDYASLDALVMDAT
                     NNLIEPWYQEDPDLVVIVGRQLLADKYFPIVNKEQDNSEMLAADVIISQKRIGNLPAV
                     RVPYFPADAMLITKLENLSIYYMDDSHRRVIVENPKLDRVENYESMNIDYVVEDYAAG
                     CLVEKIKVGDFSTPAKATAEPGA"
     gene            complement(11864..12718)
                     /locus_tag="JNZ57_000437"
     CDS             complement(11864..12718)
                     /locus_tag="JNZ57_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001074418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
                     /protein_id="HAY8826773.1"
                     /translation="MAKKVSKFFRIGVEGDTCDGRVISAQDIQEMAETFDPRVYGCRI
                     NLEHLRGILPDGIFKRYGDVVELKAEKIDDDSALKGKWALFAKITPTDDLIAMNKAAQ
                     KVYTSMEIQPNFANTGKCYLVGLAVTDDPASLGTEYLEFCRTAKHNPLNRFKLSPENL
                     ISVATPVELEFEDLPETVFTALTEKVKSIFGRKQASDDARLNDVHEAVTAVAEHVQEK
                     LSATEQRLAEVETAFSALKQEVTDRADETSQAFSRLKNSLDNTESLTQQRRSKATGGG
                     GDALMTNC"
     gene            12892..14664
                     /locus_tag="JNZ57_000438"
     CDS             12892..14664
                     /locus_tag="JNZ57_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001357052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase ATPase subunit family protein"
                     /protein_id="HAY8826774.1"
                     /translation="MTITTDTTLLHDPRRQAALLYWQGFSVPQIAAMLQMKRPTVQSW
                     KQRDGWDSVAPISRVEMSLEARLTQLIIKPQKTGGDFKEIDLLGRQIERLARVNRYSQ
                     TGNEADLNPNVANRNKGGRRKPKKNFFSDEAIEKLEQIFFEQSFDYQLHWYRAGLEHR
                     IRDILKSRQIGATFYFSREALLRALKTGHNQIFLSASKTQAYVFREYIIAFARLVDVD
                     LTGDPIVLGNNGAKLIFLGTNSNTAQSHNGDLYVDEIFWIPNFQVLRKVASGMASQSH
                     LRSTYFSTPSTLAHDAYPFWSGELFNRGRASAAERVEIDVSHNALAGGLLCADGQWRQ
                     IVTIEDALKGGCTLFDIEQLKRENSADDFKNLFMCEFVDDKASVFPFEELQRCMVDTL
                     EEWEDYAPFAANPFGSRPVWIGYDPSHRGDSAGCVVLAPPVVAGGKFRILERHQWKGM
                     DFATQAESIRKLTEKYNVEYIGIDATGLGVGVFQLVRSFYPAARDIRYTPEMKTAMVL
                     KAKDVIRRGCLEYDVSATDITSSFMAIRKTMTSSGRIATYEASRSEEASHADLAWATM
                     HALLNEPLTAGISTPLTSTILEFY"
     gene            14664..15698
                     /locus_tag="JNZ57_000439"
     CDS             14664..15698
                     /locus_tag="JNZ57_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000038204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HAY8826775.1"
                     /translation="MSKKKGKTPQPAAKKMTASAPKMEAFTFGEPVPVLDRRDILDYV
                     ECISNGRWYEPPVSFTGLAKSLRAAVHHSSPIYVKRNILASTFIPHPWLSQQDFSRFV
                     LDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEEDVYWWVPSFNEPTPFTPGSV
                     FHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAVQDR
                     NDIEMLRENMVKSKGRNNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAAD
                     LLDAHRIPFQLMGGKPENVGSLGDIEKVAKVFVRNELIPLQDRIREINGWLGQEVIRF
                     KNYSLDTDNS"
     gene            complement(16103..17032)
                     /locus_tag="JNZ57_000440"
     CDS             complement(16103..17032)
                     /locus_tag="JNZ57_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000109483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4238 domain-containing protein"
                     /protein_id="HAY8826776.1"
                     /translation="MSVARHHHFLSQCYLKGFTSNGGKKSKLTVIDLKERKTFESNTR
                     NVGGVRDFNRLELDGVDPNYLESSLAEFEGSVATHLRKLEEGGEFSGETKDVILEFIS
                     LLAIRTPAQREHLSSPLKQIAKFIMKSSVSSAERWDDCKLAYEKEMGESLPYDLAYEK
                     IKNFVDGDNFEINVIREFMIDMEMKCVPVITKLLHQRNWSLMTISDGQGSFITSDNPV
                     CLMWTNPELARGPYSPGFGVKDTLVLFPVSKNLLLAGEFDGHEGVFSCNEEQAAVFNT
                     SVIRHTAERIFSSNDNFKFLDSSKKMKQGKSLV"
     gene            complement(17136..19307)
                     /locus_tag="JNZ57_000441"
     CDS             complement(17136..19307)
                     /locus_tag="JNZ57_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000268616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication endonuclease"
                     /protein_id="HAY8826777.1"
                     /translation="MAVKASGRFVPPSAFAAGTGKTFTGAYAWNAPREAVGRERPLTR
                     DEMRQVQGVLSTINRLPYFLRSLFTSRYDYIRRNKSPVHGFYFLTSTFQRRLWPRIER
                     VNQRHEMNTDASLLFLAERDHYARLPGMNDKELKKFAARISSQLFMMYEELCDAWVDA
                     HGEKESLFTDEAQAHLYGHVAGAARAFNISPLYWKKYRKGQMTTRQAYSAIARLFNDE
                     WWTHQLKGQRMRWHEALLIAVGEVNKDRSPYASKHAIRDVRARRQANLEFLKSCDLEN
                     RETGERIDLISKVMGSISNPEIRRMELMNTIAGIERYAAAEGDVGMFITLTAPSKYHP
                     TRQVRKGESKTVQLNHGWNDEAFNPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEP
                     HHDGTPHWHMMLFCNPRQRNQIIEIMRRYALKEDGDERGAARNRFQAKHLNRGGAAGY
                     IAKYISKNIDGYALDGQLDNDTGKPLKDTAAAVTAWASTWRIPQFKTVGLPTMGAYRE
                     LRKLPRGVSIADEFDERVEAARAAADSGDFALYISAQGGANVPRDCQTVRVARSPSDE
                     VNEYEEEVERVVGIYAPHLGARHIHITRTTDWRIVPKVPVVEPLTLKSGIAAPRSPVN
                     NCGKFTGGDVPVMHPTPSEHAAAVLNLVDSGVIGWDDPEVVTVLRSALKHGAPRPNWQ
                     QRNCEPLKPYQIAPSGRMTKAERSQIPRIHFELALIGKTYQ"
     gene            complement(19297..19572)
                     /locus_tag="JNZ57_000442"
     CDS             complement(19297..19572)
                     /locus_tag="JNZ57_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000027668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8826778.1"
                     /translation="MSIRIEIGERYVVTSDSFQFILHEKKRAESGKNAGQEWLAVVGY
                     YPKLSQLVSGLMHHDILTGSAKSFADLNAQVEQLSRRCSEAFGSYGR"
     gene            complement(19569..19793)
                     /locus_tag="JNZ57_000443"
     CDS             complement(19569..19793)
                     /locus_tag="JNZ57_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016242005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HAY8826779.1"
                     /translation="MPDNVDFIQEQQTELLERQINAARVKHCGVSSLVCEECDAPIPA
                     ARRAAYPSATRCVSCQSVFEAKNKHYRRMA"
     gene            complement(19793..20095)
                     /locus_tag="JNZ57_000444"
     CDS             complement(19793..20095)
                     /locus_tag="JNZ57_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001277953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8826780.1"
                     /translation="MSCSRSVVLLNNALKIAVMKNGDLSLIQLGLDKEKREITESVIA
                     IYQNELNLLSDVVNLLVKRAVFHKQISSVDELTKLTTELASYCADEFKKLNDKRNW"
     gene            complement(20095..20319)
                     /locus_tag="JNZ57_000445"
     CDS             complement(20095..20319)
                     /locus_tag="JNZ57_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016236090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2732 family protein"
                     /protein_id="HAY8826781.1"
                     /translation="MHTVSENQCGKYALLLQQARTEAQADAATRFSSHLDAMIRHITK
                     AELSRVEIVELLSQESEKFHNIGLSRGEVL"
     gene            complement(20383..20883)
                     /locus_tag="JNZ57_000446"
     CDS             complement(20383..20883)
                     /locus_tag="JNZ57_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017441883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein B"
                     /protein_id="HAY8826782.1"
                     /translation="MTVMTLNLVEKQPAAMRRIIGKHLAVPRWQETCDYYNQMMERER
                     LTVCFHAQLKQRHATMRFEEMNDVERERLVCAIDELRGAFSKRRQVGASEYAYISFLT
                     VSQRRTLFMHAGLTEKEFNQPYWRINEESCYWRDALFRALRELFSLFEYAPTILTSVK
                     PEQYLH"
     gene            complement(21061..21336)
                     /locus_tag="JNZ57_000447"
     CDS             complement(21061..21336)
                     /locus_tag="JNZ57_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8826783.1"
                     /translation="MSKQVTLMTDAIPYQEFAKLIGKSTGAVRRMIDKGKLPVIDMTD
                     PQSASGRAGEYWVYLPAWNNGLKLAYESRPKEIRDGWLMWLGLGEPR"
     gene            21451..21750
                     /locus_tag="JNZ57_000448"
     CDS             21451..21750
                     /locus_tag="JNZ57_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000020919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY8826784.1"
                     /translation="MSNTISEKIVLMRKSEYLSRQQLADLTGVPYGTLSYYESGRSTP
                     PTDVMMNILQTPQFTKYTLWFMTNQIAPESGQIAPALAHFGQNETTSPHSGQKTG"
     gene            21866..22879
                     /locus_tag="JNZ57_000449"
     CDS             21866..22879
                     /locus_tag="JNZ57_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001755162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HAY8826785.1"
                     /translation="MAIKKLDDGRYEVDIRPTGRNGKRIRRKFDKKSEAVAFEKYTLY
                     NHHNKEWLSKPTDKRRLSELTQIWWDLKGKHEEHGKSNLGKIEIFTKITNDPCAFQIT
                     KSLISQYCATRRSQGIKPSSINRDLTCISGMFTALIEAELFFGEHPIRGTKRLKEEKP
                     ETGYLTQEEIALLLAALDGDNKKIAILCLSTGARWGEAARLKAENIIHNRVTFVKTKT
                     NKPRTVPISEAVAKMIADNKRGFLFPDADYPRFRRTMKAIKPDLPTGQATHALRHSFA
                     THFMINGGSIITLQRILGHTRIEQTMVYAHFAPEYLQDAISLNPLRGGTEAESVHTVS
                     TVE"
     gene            complement(23145..23462)
                     /locus_tag="JNZ57_000450"
     CDS             complement(23145..23462)
                     /locus_tag="JNZ57_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416589.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8826786.1"
                     /translation="MKKIAAISLTSVFLISGCAVHNDETSIGKFGLAYKSNIQRKLDN
                     QYYTEAEASLARGRISGAENIVKNDATHFCVTQGKKMQIVELKTEGVGLHGVARLTFK
                     CGE"
     gene            23868..24767
                     /gene="yegS"
                     /locus_tag="JNZ57_000451"
     CDS             23868..24767
                     /gene="yegS"
                     /locus_tag="JNZ57_000451"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid kinase YegS"
                     /protein_id="HAY8826787.1"
                     /translation="MAEFPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKG
                     DAARFVEEARKLGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATS
                     VGIPEALDKALKLAIAGNAIAIDMAQVNKQTCFINMATGGFGTRITTETPEKLKAALG
                     GVSYIIHGLMRMDTLQPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPNALIND
                     GLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAPHEITFNLDGEPLSGQ
                     NFHIEILPAALRCRLPPDCPLLR"
     gene            complement(24849..25628)
                     /locus_tag="JNZ57_000452"
     CDS             complement(24849..25628)
                     /locus_tag="JNZ57_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY8826788.1"
                     /translation="MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRF
                     LEQKGVVTRFHGGAAKIMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT
                     VILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMH
                     GSIAERSLQDINADLMFVGADGIDAVNGITTFNEGYSISGAMVTAANKVIAVLDSSKF
                     NRRGFNQVLPIEKIDIIITDDAVSEVDKLALQKTRVKLITV"
     gene            complement(25728..26768)
                     /gene="gatD"
                     /locus_tag="JNZ57_000453"
     CDS             complement(25728..26768)
                     /gene="gatD"
                     /locus_tag="JNZ57_000453"
                     /EC_number="1.1.1.251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HAY8826789.1"
                     /translation="MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPR
                     IFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQ
                     CAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCE
                     NKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKFFGAMQTFNSSEMSAP
                     QMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKI
                     LRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFTQAVRDIA
                     RNAMPGKVLLIP"
     gene            complement(26816..28171)
                     /locus_tag="JNZ57_000454"
     CDS             complement(26816..28171)
                     /locus_tag="JNZ57_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HAY8826790.1"
                     /translation="MFSEVMRYILDLGPTVMLPIVIIIFSKILGMKAGDCFKAGLHIG
                     IGFVGIGLVIGLMLDSIGPAAKAMAENFDLNLHVVDVGWPGSSPMTWASQIALVAIPI
                     AILVNVAMLLTRMTRVVNIDIWNIWHMTFTGALLHLATGSWMIGMAGVVIHAAFVYKL
                     GDWFARDTRNFFELEGIAIPHGTSAYMGPIAVLVDAIIEKIPGVNRIKFSADDIQRKF
                     GPFGEPVTVGFVMGLIIGILAGYDVKGVLQLAVKTAAVMLLMPRVIKPIMDGLTPIAK
                     QARSRLQAKFGGQEFLIGLDPALLLGHTAVVSASLIFIPLTILIAVCVPGNQVLPFGD
                     LATIGFFVAMAVAVHRGNLFRTLISGVIIMSITLWIATQTIGLHTQLAANAGALKAGG
                     MVTSMDQGGSPITWLLIQFFSPQNIPGFIIIGAIYLTGIFMTWRRARGFIKQEKVVLA
                     E"
     gene            complement(28175..28459)
                     /gene="gatB"
                     /locus_tag="JNZ57_000455"
     CDS             complement(28175..28459)
                     /gene="gatB"
                     /locus_tag="JNZ57_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIB"
                     /protein_id="HAY8826791.1"
                     /translation="MKRKIIVACGGAVATSTMAAEEIKELCQNHNIPVELIQCRVNEI
                     ETYMDGVHLICTTAKVDRSFGDIPLVHGMPFISGIGIEALQNKILTILQG"
     gene            complement(28490..28942)
                     /gene="gatA"
                     /locus_tag="JNZ57_000456"
     CDS             complement(28490..28942)
                     /gene="gatA"
                     /locus_tag="JNZ57_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIA"
                     /protein_id="HAY8826792.1"
                     /translation="MTNLFVRSGISFVDRSEVLTHIGNEMLAKGVVHDTRPQALIARE
                     AEFPTGIMLEQHAIAIPHCEAIHAKSSAIYLLRPTNKVHFQQADDDNDVEVSLVIALI
                     VENPQQQLKLLRCLFGKLQQPDIVETLITLPETQLKEYFTKYVLDSDE"
     gene            complement(28952..30219)
                     /gene="gatZ"
                     /locus_tag="JNZ57_000457"
                     /pseudo
     CDS             complement(28952..30219)
                     /gene="gatZ"
                     /locus_tag="JNZ57_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416598.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase subunit GatZ"
     gene            complement(30248..31102)
                     /gene="gatY"
                     /locus_tag="JNZ57_000458"
     CDS             complement(30248..31102)
                     /gene="gatY"
                     /locus_tag="JNZ57_000458"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416599.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase subunit GatY"
                     /protein_id="HAY8826793.1"
                     /translation="MYVVSTKQMLNNAQRGGYAVPAFNIHNLETMQVVVETAANLHAP
                     VIIAGTPGTFTHAGTENLLALVSAMAKQYHHPLAIHLDHHTKFDDIAQKVRFGVRSVM
                     IDASHLPFAQNISRVKEVVDFCHRFDVSVEAELGQLGGQEDDVQVNEADAFYTNPAQA
                     REFAEATGIDSLAVAIGTAHGMYASAPALDFSRLENIRQWVNLPLVLHGASGLSTKDI
                     QQTIKLGICKINVATELKNAFSQALKNYLTEHPEATDPRDYLQSAKSAMRDVVSKVIA
                     DCGCEGRA"
     gene            complement(31410..32462)
                     /gene="fbaB"
                     /locus_tag="JNZ57_000459"
     CDS             complement(31410..32462)
                     /gene="fbaB"
                     /locus_tag="JNZ57_000459"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006820796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HAY8826794.1"
                     /translation="MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNN
                     RPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAI
                     EAGCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMG
                     AVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSA
                     DLTGQANHLAATIGADIVKQKMAENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQL
                     ANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILGRKAFKKSMADGVKL
                     INAVQDVYLDSKITIA"
     gene            32719..33996
                     /locus_tag="JNZ57_000460"
     CDS             32719..33996
                     /locus_tag="JNZ57_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8826795.1"
                     /translation="MKTTAKLSFMMFVEWFIWGAWFVPLWLWLSKSGFSAGEIGWSYA
                     CTAIAAILSPILVGSITDRFFSAQKVLAVLMFAGALLMYFAAQQTTFAGFFPLLLAYS
                     LTYMPTIALTNSIAFANVPDVERDFPRIRVMGTIGWIASGLACGFLPQILGYADISPT
                     NIPLLITAGSSALLGVFAFFLPDTPPKSTGKMDIKVMLGLDALILLRDKNFLVFFFCS
                     FLFAMPLAFYYIFANGYLTEVGMKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLL
                     LGLVTAAIRYGFFIYGSADEYFSYALLFLGILLHGVSYDFYYVTAYIYVDKKAPVHMR
                     TAAQGLITLCCQGFGSLLGYRLGGVMMEKMFAYQEPVNGLTFNWSGMWTFGAVMIAII
                     AVLFMIFFRESDNEITAIKVDDRDIALTQGEVK"
     gene            33993..34997
                     /locus_tag="JNZ57_000461"
     CDS             33993..34997
                     /locus_tag="JNZ57_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HAY8826796.1"
                     /translation="MKTERILGALYGQALGDAMGMPSELWPRSRVKAHFGWIDRFLPG
                     PKENNAACYFNRAEFTDDTSMALCLADALLEREGKIDPNLIGRNILDWALRFDAFNKN
                     VLGPTSKIALNAIRDGKPVAELENNGVTNGAAMRVSPLGCLLPARDVDSFIDDVALAS
                     SPTHKSDLAVAGAVVIAWAISRAIDGESWSAIVDSLPSIARHAQQKRITTFSASLAAR
                     LEIALKIVRNADGTESASEQLYQVVGAGTSTIESVPCAIALVELAQTDPNRCAVLCAN
                     LGGDTDTIGAMATAICGALHGINAIDPPLKAELDAVNQLDFNRYATALAKYRQQREAV
                     "
     gene            34994..35944
                     /locus_tag="JNZ57_000462"
     CDS             34994..35944
                     /locus_tag="JNZ57_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY8826797.1"
                     /translation="MSGARLHTLLPELTTRQSVMVVGAAVIDVIADAYVLPWRGCDIE
                     LKQQSVNVGGCALNIAVALKRLGIEAGNALPLGQGVWAEIIRNRMAKEGLISLIDNAE
                     GDNGWCLALVEPDGERTFMSFSGVENQWNRQWLARLTVAPGSLLYFSGYQLASPCGEL
                     LVEWLEELQDVTPFIDFGPRIGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAE
                     ITTLGKQWQEKFAAPLIVRLDKEGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGLAS
                     GLPLADAVLLGNAVASWVVGHRGGDCAPTREELLLAHKNV"
     gene            complement(35918..36664)
                     /locus_tag="JNZ57_000463"
     CDS             complement(35918..36664)
                     /locus_tag="JNZ57_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HAY8826798.1"
                     /translation="MEQAHTQLIAQLNERILAADNTPLYIKFAETVKNAVRSGVLEHG
                     NILPGERDLSQLTGVSRITVRKAMQALEEEGVVTRSRGYGTQINNIFEYSLKEARGFS
                     QQVVLRGKKPDTLWVNKRVVKCPEEVAQQLAVEAGSDVFLLKRIRYVDEEAVSIEESW
                     VPAHLIHDVDAIGISLYDYFRSQHIYPQRTRSRVSARMPDAEFQSHIQLDSKIPVLVI
                     KQVALDQQQRPIEYSISHCRSDLYVFVCEE"
     gene            complement(36716..37534)
                     /locus_tag="JNZ57_000464"
     CDS             complement(36716..37534)
                     /locus_tag="JNZ57_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416605.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase 25 family protein"
                     /protein_id="HAY8826799.1"
                     /translation="MQLRITSRKKLTALLCALGLISIVAIYPRQTVNFFYSTAVQITD
                     YIHFYGYRPVKSFAIRIPASYTIHGIDVSRWQERIDWQRVAKMRDNGIRLQFAFIKAT
                     EGEKLVDPYFSRNWQLSRENGLLRGAYHYFSPSVAAPVQVRLFLQTVDFSQGDFPAVL
                     DVEERGKLSAKELRKRVSQWLKMVEKSTGKKPIIYSGAVFYHTNLAGYFNEYPWWVAH
                     YYQRRPDNDGMAWRFWQHSDRGQVDGINGPVDFNVFNGTVEELQGFVDGIKETP"
     gene            complement(37599..38399)
                     /gene="thiD"
                     /locus_tag="JNZ57_000465"
     CDS             complement(37599..38399)
                     /gene="thiD"
                     /locus_tag="JNZ57_000465"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HAY8826800.1"
                     /translation="MKRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAQ
                     NTRGVQSVYRIEPDFVAAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLQRYQIQNV
                     VLDTVMLAKSGDPLLSPSAVATLRSRLLPQVSLITPNLPEAAALLDAPHARTEQEMLE
                     QGRSLLAMGCGAVLMKGGHLDDEQSPDWLFTREGEQRFTAPRIMTKNTHGTGCTLSAA
                     LAALRPRHTNWADTVQEAKSWLSSALAQADTLEVGHGIGPVHHFHAWW"
     gene            complement(38396..39184)
                     /gene="thiM"
                     /locus_tag="JNZ57_000466"
     CDS             complement(38396..39184)
                     /gene="thiM"
                     /locus_tag="JNZ57_000466"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HAY8826801.1"
                     /translation="MQVDLLSSAQSAHTLHLFHQHSPLVHCMTNDVVQTFTANTLLAL
                     GASPAMVIETEEASQFAAIASALLINVGTLTQPRAQAMRAAVEQAKSSQTPWTLDPVA
                     VGALDYRRRFCLELLSHKPTAIRGNASEIMALAGVANGGRGVDTTDAAANAIPAAQTL
                     ARETGAIVVVTGEVDYVTDGHRIVGIHGGDPLMTKVVGTGCALSAVVAACCALPGDML
                     ENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEVQA"
     regulatory      complement(39219..39315)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(39407..39679)
                     /gene="rcnR"
                     /locus_tag="JNZ57_000467"
     CDS             complement(39407..39679)
                     /gene="rcnR"
                     /locus_tag="JNZ57_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni(II)/Co(II)-binding transcriptional repressor
                     RcnR"
                     /protein_id="HAY8826802.1"
                     /translation="MSHTIRDKQKLKARASKIQGQVVALKKMLDEPHECAAVLQQIAA
                     IRGAVNGLMREVIKGHLTEHIVHQGDELKREEDLDVVLKVLDSYIK"
     gene            39800..>40033
                     /locus_tag="JNZ57_000468"
     CDS             39800..>40033
                     /locus_tag="JNZ57_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8826803.1"
                     /translation="MTEFTTLLQQGNAWFFIPSAILLGALHGLEPGHSKTMMAAFIIA
                     IKGTIKQAVMLGLAATISQTAVVWLIAFGGMVIS"
BASE COUNT         9778 a        10658 c         9649 g         9948 t
ORIGIN      
        1 cgatacaaat catcctatat tctaaggagt tttaagttac tcagcctgcc aattactggg
       61 gcatttaatt tgtatgatct gtatcaaagc tgggatataa gttaagtgaa gtatattagg
      121 cacgaattac cagcgtctgc tcttggcaca gagcggactg tcagattaga ctttactctg
      181 tgctataggt atgtcagctc atacaactta ttgcggcatt tccggccatt caggatttgc
      241 aggatccaca cgactgacca gaacgctgta gcgttcccat gcttccagtc ggctgcgctc
      301 ctcatctgtt gccatattca gcctgacagc gcgctccagc ggcaaaatca cggattcagc
      361 ttcggaaagt aaagttgcct tttgtgattc tgccagttgc tgctgttcgt ctgccgtata
      421 aatccgctta atcacggcac catccttaaa catccattta cctgagtcat cagcacgtcg
      481 gttggcggta atatcaggaa cctcgacaac gctaaaacct tcagggttaa gcgttgaagc
      541 atctctggtg atgccgacaa ttatattatt ctcgtcgtaa acaatcttta tcgtgtcttc
      601 ctgaaaatta cttacttcct cataccagtt ttttccgtct tcagaccata accagataac
      661 atcaaaattt tttgtcagtt gatattgggc aacagttttg ggattacccg cagtaatatt
      721 ttttaaatgc tgcataaatt acacctgtgc gacgttatac catgtgccat taatgtattt
      781 ttgtattggt ctgaatactg ccggatcatc gccatcaact tcgccgacaa tgccaagccc
      841 tgtaattaca tggcctgatt tctcatacat cacgcctttt tgcatggtct gaacaacacg
      901 cgtacccagg cgaacatctt tcacatagcg ggaatcaaaa tttccgtaat ctgatgggtt
      961 aacacgtcca gtaacactca ggccatgccc cattgacact ccgccattgg cgttattgat
     1021 agtcagcggt cttaaaccgt tccatgttcc aaatttatcg ccagaggccg tcagcattaa
     1081 atatgtgctg ccgccatcat tcctgataaa gaatccataa ttgccataag caatgcgcag
     1141 accattagca ctgagcgatg taatttcacc tcttgaacga agaccataag cagagctgag
     1201 tgataattct tcctgagcat cagtattacc tgtcgcccag cgaattaccc cgccctgtac
     1261 tgtttcatgc cagatagtgt ctccttctcc accacgaaac tttctgagat attttttgcc
     1321 gcctctggtg ccggaacata aggccgtaga catataggca ttctggcttc cactatcctg
     1381 attaatagtt ccagacatag aatcgccgta acggttccag tcacgccgcc agccaggagc
     1441 atagttgtcc ccgtggttaa tataagtaaa ttgcgcgctt gtagcgcccc caccgcttga
     1501 tgttgttggt gtggtaatac gaatagtcat tgcagacttt atgcccatta cctcaataac
     1561 agcgccagca agatgaatat tgccacagcc agtatccgta atgattttgt tatttgcata
     1621 tgaccaggag cctttgcaca tccagtacgg atgattaaat gcaccacggg aatccagcca
     1681 ttcaataaac tgagcggttg tccagtttcc ggcttcagtg ctcaaagcgc cgctataagc
     1741 acgacaggca ccgatatttt tcgtgaaggt atcctttccc ggaatatccg caccgttctg
     1801 atctttctga agacgttttt cagcattgtc ataggcagac ttcaccgcct ttggcgttgc
     1861 agcctgcgtt tcagaatcac tgttggtggc gctactgagc tggacaagac cttttcgcgc
     1921 cgtggtggca tcctgtgcag tgtatttccc gttagcaagg tcatatgctg tcttaaccgc
     1981 ctttggcgtt gccgcaagcg tttcagaatc gctgttggtg gcgctactga gctgaacaag
     2041 gccttttcgc gctgttgtgg catcctgtgc agtgtatttc ccgttagcaa ggtcatatgc
     2101 tgcctttacc gctttcggcg ttgcggcgag cgtttcagac gtgctgttag tcgcactact
     2161 gagctgaaca aggccttttc gcgcggtggt agcgtcctgt gcggtatatt tcccgttagc
     2221 aaggtcatat gcggccttaa ccgctttcgg agttgcagcc agtgtttcag acgtgctgtt
     2281 ggtcgcactg cttaactgag taaaaccttt tgcggtcagc gaggcgtcag ggtgacgtcg
     2341 tgactgttca tgttctgcaa ttttgtcatc aacgtaatcc tgcgttgcca tcaccgttgt
     2401 ggtgtcaatg gtcagctcca ctgaggccac actgctgacg atgatgacca tgcggcaggt
     2461 ctgcgaacgc cctgagcctt cggcaagggc tggcttataa ctttcggcca tgttcgccac
     2521 ggcaattagc gttcccgcat catcgtacag gccaagttca cgcatccaga aaccgcccac
     2581 ctccggcgga ataaccagct ctgcgataat ataattactg tttcgtttgt cctggctgat
     2641 tttgttcagc gcatgtcgcc agacttcatg gataagcccg gtctgtccgg catccgggac
     2701 aggcaattta ccaccgccat ccccgacggc catcgtggta atgttgacct tccgccctcc
     2761 cggtgcggtt gccgctgcca gctttgctgc accggcagtg gtgataacgg ttttgaattt
     2821 tgtgctcatt attcctcact tatccggggt aaaccgtaat tacatcgccg tcgtaagcca
     2881 caccaccggc gaacaggtag ccgggaatat cccgggtaat gttcaggcca ataagatgac
     2941 ggcttgcagg tttggcatca gcaataagcc gttccatttc ctgatacatt gcctctgtga
     3001 tgccgctttc cagtacgcca atatcaagcc ggaaggtgcc tggcgggtca ctggtttccc
     3061 accactccgt cacgttgatg agatagccca gcggctccac cacacgccgg attgcaccta
     3121 tagtgccttt atgacagtgg atgaaatagg catcgcgaat aacggcgcgt ttggtcgctt
     3181 ccggccactt ttcatcccgc ctgtcgaccg aaaacgccca cgccagccac ggcagcagat
     3241 ttgccggaca ggtatccggg ttccacagat cacgaatact gaccggcgtt ttttcaattt
     3301 ccgcacaggc ttttgcggcg gcgacttcaa gcggtgatga gccggtcggc agcaggcgcg
     3361 aatcactcat ccgagcctcc ggtcacgacg cggtattcgg tacagaaaga cgcctgcgta
     3421 ctgttgagca caatgtcggc cagtggtgca gccagttcga cacgctgcac gccttccaca
     3481 tgcaaagcgg cataaatggc agacagacgg atgtcgcgcc ccagccggtg ctgtgccgtg
     3541 atgtacgctt ccagtttttt cacggcggca gcgcggatgg gttcgctttc gggaccaggg
     3601 taaaggtaaa gcgtggcgtt tatctggtat tcaacgatgg cggcagactg cacggtcacg
     3661 cggtcggcta ccggcctgac gtcctcgcca ttaagggcgt tacgcaccac cgccagcagg
     3721 tcttcggatg cgacaccgtt attttcacgt gacagcacag agatggtgac gcaggccgga
     3781 gaaggactgg tgacagagat atctgcgaca cgcccgtcgg cacttcgacc atgatactga
     3841 taggccccca ccgacccggc gacgcttaaa ccttcaaacg cctgctgaat acgcagacga
     3901 taatcggtgt cagattccat ctcggccggt gtcggcggga gggtcgaatc atctgccggg
     3961 gtgataatca ggcgcgcggt gttgtaattg gcaccaatca catcaaggtc attaccggca
     4021 gcacaggcca gcatcaccgc ccgtgcggcc tcattcacac gctgacgcca gataagctca
     4081 cgataagcat tttcctccag cagtttgacg agaggctcag attcaagcgt cagggtacgg
     4141 gcgaccgcct cctgctggtc ttccgggtaa agggaaatca gtgtcgcctt gcgttcggca
     4201 agaatggttt caaagtccag ctcctcgacc acatccggtg cgggtagctg gttcaggtcg
     4261 ataatcggca tggtttcaac tcacagggat ggttaacgaa agtggctggc cggtgtcgtt
     4321 gtgctgaccg gttaacgtga ccgtcattcg cccgtcaaaa ctgcgcgccg tggtgacgga
     4381 tgacagggtg acgcggggtt cccatttcag cactgccatg taacaggcga ccttaatctg
     4441 caactcaagc gccggggtct gcggctggtc aatcattgat gccagcaacg agccgtaatc
     4501 acgacgcatc acccgtgagc cgaccggtgt gcgcaggata tcgccgatac tctggctgat
     4561 atgctcaagg tcagtgaccg tcaggccatc actgcgattc attccgagat aacgcgctgt
     4621 catagaggac tcccggttgt gccgccgctg tcgccggggt gtttatgggt atgcagtacc
     4681 ttcccgtttg atgaaagttc accgccggtg tgttcaatgt tgccgcgcat cgtcccgccc
     4741 ttctgcactt ccagcgtgcc ggtaatcagc ttgttggtgc agaccacctc cggtgtgtcc
     4801 agggtgacgc gggttgatgc tttcaccatg accaccggca ccgtggcagt aacagaatca
     4861 gaagccgtca cgctggccgt tttaattccg cttaccgtga gtgcactggt ttcaggttca
     4921 tactcaatca ccgccccgtc agggaaacgg atatgcaggg catccgccga cgccgacggc
     4981 gcggggttat cgccggaata aatccccggc agaacgaacg ccgtgtcgag ttcaccgccc
     5041 acggccagaa tcagcacctg ttcccccacg gaaggtgccc accatgtgcg cgaacgaccg
     5101 gcgcgatggg tcagccactg aagccagtcg gtgcacatgc cgccggtctg cacacggcag
     5161 cgaccggcat taaggtcggt ttcgacgata atgccagtgc gaatcatatt gcgtataaag
     5221 cgaagaattt cattgtattg tgcattcatt cgataataat gattctgtac aatctcgaag
     5281 taaatcacac cacgatttct ggtgcacaga acaacaaggg acaacaaaat ccattatgag
     5341 tacttacttt ttctcgtcag aaacaatgaa agaattgttc aaagattatc tggtcttttt
     5401 gaacacgctg actcccggca caaactttga atcaagcaga aacaaaataa ttgctcaagc
     5461 aataaacttc atttccgaaa accctgaaga ttgggacaaa aaatcccagt acaacattgc
     5521 tatgattggc gacaccttta aaagtttctt aagagaaaag ggagaagata acaacagcat
     5581 caaccttata ttcacttgct tttttagatt tatcattgaa ccaagcattc tctctccgga
     5641 aatagagtct cacttttcac cactaagaac catcaaggat tttgctctgt ataactataa
     5701 tgaattcgat gagcggagca gagcacagat agacttttct cttagagaac tgccattagc
     5761 aatggttaaa gaagttttaa gctccagcaa tgttgacaca tataaaaaat acattgatag
     5821 tttaaacgaa gggcgtcaat ttttcgaaaa gtgcgactcc ttcttaaagg agcaacatgc
     5881 caaaatagag tcaatcaaag agtcattaaa agggtatgag gtcgcattta attttgttgg
     5941 attgtttgaa ggctttaatt cacttggcaa aaagaaagaa agtgaaatca tgctatcaag
     6001 aataattctt atcatcttgg ctataatcat tccctccccg ctgatatact atggaatgca
     6061 taaattacca gctctcgaaa cgacaaatgc tgccacatat tttatgtcag cactaccttt
     6121 tgcatcagtt acattgattt tcatgtatta ctttagagtt gtactgctaa atcatatatc
     6181 gttacgaact cagattatgc aaatagaact cagaaagagc ctttgtcagt tcattcagag
     6241 ttatagcgac tattcctcag agataaggaa aaacaatccg gaagcgcttt caaaattcga
     6301 agacgtagta ttttcaaaca tcatgctatc cgatgataag ataccatcta catttgatgg
     6361 cattgagcaa atagcatcgt taatcaattc attaaaaaat ggaaagtaat gataaaaggc
     6421 caataactgg ccttttattt attaacatga aaattcaaaa taaattatgc taatcaattg
     6481 atttctatct tatattctca gatgattaaa gctaacgatt caggtgagcc aggataatct
     6541 cttcaatcat ctgcacatcc tcaccggtaa agccgagcag aggacgcgcc ggatattcaa
     6601 ttttcttacc gtctttccgg gtttcttccg acagaccgaa ctgatgcaca ctggctattt
     6661 tcggtgactt cccgccgtaa aactccattg atgcctgttc agggctggcg cggatatgca
     6721 aaaaacgact ggtgataagt ttcgcaaaca tttttcgctt aacgcgaccg gtcttttttc
     6781 tggcgctctg ctgctggcgt ggtgcgtagg gtgtgccgtc cggggctttc tgtgccatca
     6841 cccgacgctg ctgactctga cgcagacgtt tcgccagttc ggcgctcagt cgccgacgcc
     6901 ctgacggtga cagcgactca atcagtccgg tcagcctgtc ttcaaaacgc ttaaactcat
     6961 tcatcccact tactcaccag ttcgccattg atataaagct ccatcgggcg ggtgaccggc
     7021 tccggcggcg gaggttccgg gatattcttc acatgcagcg cgccgtccac ctcactgacc
     7081 agcgtgcgct cggtcagcat caggctgatg ctgatatcaa agctgctgtc attgttgatg
     7141 tctgcataaa acgtgaagcc ctttttctgg ccttcgtcgg tggtcatgat gtcgggctga
     7201 ttttcccgca gccacgccag caccggcacg atgagcaggt caaaatcacc ggtaaagtcg
     7261 gtcacaatga cattgagcgt gtaacgcttt tcgaacgaca gcgacgtcgc cagtgtggag
     7321 gcaatactcc cgttatccac gaatatccgc agcatatcgg ggttagtttt cagcaccgtg
     7381 acggcatcag tcagcgccct gcgcaggctg tcgggtttga gcatcgtttt cgtcctgaca
     7441 gtgtttaatc atttttacct ggctggcaca gcgtgccagc gcgttctcaa gctgccggat
     7501 atcggcactt aaatcgccgt tcttctgcgg gtcactgccc ggcatcgggc aaaggctcac
     7561 tttcgggcag gcgttggcga caatcactgg cgtcagtgca ggccggacgc tggtgcaacc
     7621 ggcgcacagc atcaggcagg tcagcgccat accagcggcg gaaatcctcg ttttcattaa
     7681 gtaacctcgt gatggttttc tcgcgcagtg cttcacgctt cgcggcgttc tccagttcct
     7741 gacgcagtgc cacctgcgcc agctcgtttt tgtctgccct ggtgagtgca acatgaagct
     7801 gatttttcag catggtgatg gtcgtctgct gcccgctggc gacgctgttc gccctgtcca
     7861 gtgaggtgcg caggctggca ttttcatgct tcaccagaaa cagccccggc accgccagtg
     7921 ataacaacac aaccagcaca atcatcagct ttgacatggt tcccgcccct caaaacgctg
     7981 acggcaggcc gtacgtatca gccggaagaa caccgacgcc acaagataaa tcagcgcggt
     8041 aaaaatccac ccggcagcga ccagcgcgat aaacgtcgcc accatcacca ccagagccgc
     8101 cgcccgtctg cgccacggca ccggctgcaa aaacagcgac gtgacaatct tcacggccag
     8161 cgattccggc ggcagctccc gcccgtagcg ttccagcaca tactcagtgg catacacccc
     8221 gacaccaccg gtaaccacac agataaccgt cgccagaatc gcccaggcgg cgacaaaatt
     8281 gacggccacg ctctgcgggt aaatcaggga cagtgccagc atcagcgcca gcgacacgtt
     8341 cagcatctgt gaaagggata atttcttcat ggtgtttact ccgtttaagc cggtacgccg
     8401 ccagcggtac gccagacggt gaccagtttt tccagtgaat gctcacgctg accgtaaccg
     8461 gcacccggca gggacgccca gatattgcga cagcgtgaaa tggcgcgctc aatacgtccc
     8521 gcccggatgt catccagcgc accgcgttcg cggatcaact gaatggcgag tctgtcctgt
     8581 gacaacggac tgaaatccgg cagggcaagc tgtttgcggt aatgcggcca gaacaggtaa
     8641 agctgctgat agcgaccgga ggccgtggat ttttcaccgc gacggttaaa caccttcgcc
     8701 ggtcggccat gtgcgaacgg gtggtcactg tagtcggtga aaatttccgg ctttccgtcc
     8761 agtccggtga ctatcacgtc atagccccgg tttttcgtca gcggatggtt cgccgtccct
     8821 tcggacacgg ccagcatgtc gagaaaggcg gcgatattct gatgcgtgtt aataaccggc
     8881 attacggttt ccccctgccc ttaaagcggc gctgaatggc aatctcaatc acctgataac
     8941 cggcgatacc cagcatggag ccgatgccgc acaccgcagg caatgacagg tcaggaaact
     9001 gcaccagaac aacaccggca accatcgaga caaaaccacc gagcaacatg cgcccgataa
     9061 acagacgcgg ggtgatgggt tcaccaccgg caagcacctt gccgacaaca atcagcaccc
     9121 caatcatgaa aagcgacagg acgctttttt cttctgctgt catgcgttac tcccacagat
     9181 tgacagtttc agccacgggc gcggtctgaa cgtcgggcag ttcgacggcg gtgccgtgcg
     9241 gcagcaccgc gcccagttca gccagtcccg gatttgcggc gagcacggtc tcaaccacgc
     9301 cctcagtgcg cccgtaatac cggacacaaa tggcgtcgag cgtgtcgccc tgtagcgcaa
     9361 aggtcttcat cagatttgac tcacgatgca gcgcggcttg tcctggatgc gcgccaccgc
     9421 ccagcgcata tcccgccaca gctcatcaat ggtgctgtca atgctgtcag ccttcttgtc
     9481 gcctttcgca ctggcatcca cgccgcgata acgctcatac agcgacgcgg tcgccatcgc
     9541 acacacggcg cgctcgtagt aaaaaaccct gatgctttca ccgtcgatgt cgtccgccgg
     9601 gacgtccgcc agacgcgtaa aaccggcggc aattttctgt tcgcggtact cgtacagctc
     9661 cgcatttgtt tccgccatgc ctgacttgat ggcctcacgc agacgggcgg gggcgacagt
     9721 ctgctcaagg cgcatacgtt cccggacgcg cttcgggtcg atatcgggaa aaaagaacgt
     9781 gtttttaatc accggctcgt cgcctgccgg ttgcgggatg accaccgtac cctcaccgga
     9841 cacgggagcc tcctttcgcg gaataatcag cgtcatcatg actacctctg aaaagtcggg
     9901 cggtggacgc cggtgcagtg tcagatgatt caccctcact gaccggcgtg ccgccctggc
     9961 gcggggcgca ttcggttgtt aactggcttt ctttttcggg cgtccacgtt ttgccggtgt
    10021 cacgctccgg gtcttacgcg gggtacgggt ggccgctttt ggctgcggct gcggctccgg
    10081 cttcggtttc agctcccgct ccagtcgttc aatctctttt ttgacgcctg cctgacagtc
    10141 gagctgtgtc gcacgttgca ggtgcgccag cgcaccggcg gcatcaccac cgtcacgcag
    10201 aaacagaccg gtgattttgt gcagctttgc gcgcacttca tcaggcatgt cagcagcggc
    10261 agtcagttca agggtctccg tcagcaggcg ggtatccaca gactcaccgg cagcgtgggc
    10321 acgcatggcc gcaagcgcga cctcctcggt gaacatgtac ggcggggtgc ggcggtgttt
    10381 acccggcatg gtcagaccgt acttcagggc ataacgggca atctccagcg caccggcaat
    10441 atcgccggta tccagacgcc acagcatgac cgtcatcaga atgtcatcct gtgcaccttt
    10501 gccctgctcc agcacgccgt tcacccacgg caaccagaac ggcagcagtt cgcgtttttt
    10561 cgcggccttc agctcttttg aataaatcgc tttcagtgtg cgctggtctg cggcgagctt
    10621 aaccagcatc tgctcataga cagttgcatg tcgcagcggg gcggcttccc gctgcgcggt
    10681 catcgctgcc gagacccgca tcatgtggcg ctgtgcggga ctcgtcatcg gttacgctcc
    10741 cggctctgcg gtcgctttag ccggtgtgga gaagtcaccg accttgattt tttccaccag
    10801 acaaccggcg gcgtagtctt ccaccacgta atcaatgttc attgactcgt agttctccac
    10861 gcggtcgagt ttcgggtttt ccacaatcac gcggcgatgg ctgtcatcca tgtagtagat
    10921 ggacaggttt tccagcttcg tgatgagcat cgcatccgcc gggaagtacg ggacgcgcac
    10981 tgccggcagg ttaccgatgc gtttctggct gatgatgacg tcagcggcca gcatctcgct
    11041 gttgtcctgc tccttgttga cgatggggaa atacttgtcc gccagtagct gacgccccac
    11101 aatcaccaca aggtcagggt cttcctgata ccacggctca atcaggttgt tggtcgcatc
    11161 catcaccagt gcatcgaggc tggcataatc accgccctta cccacgcgga tgacctcaga
    11221 ggtcgtgtga ccttcctcgt cagtaacctt gctcatcacg cgcgccgggg cttcattgcg
    11281 gtatttctgc agccagccga ccgccacatc ctgcagcatc tggttactgc tgcggtcaga
    11341 ggtttcggca cgcctcacgc cgttaaaacc ggccatgatt aaatcaaggg actggcgttt
    11401 gataatggcg ttacggacac ggagctggaa atcctgataa cgcgcccaca ggtccagcgt
    11461 tttgtagcgg atataaaaat cgaagttaat ctggtcgcat tcgtacttgt ttgacgccag
    11521 cttcgagaag tccttcggct gacgctcggt gccaccggcg gtgtcggtgg tgctggcgat
    11581 ggagccggtg acaccaatac caattttttc ccctttcatt tcgctgaccg gcacaatgtt
    11641 gatgcgggtc agaaagtcag aggactcctg catggtgttc atcagggtct gggtgaccga
    11701 cggttcaacg gtgaattttt tcgacacatc accggcgtcg atgccgttca gttcggcaac
    11761 acgggacagg taggcattaa atttaaagcg ggtttcctgg cgcatagttt ttcctgaaat
    11821 taagggttaa tcgtgaaggt tttcccggac tgactgacgc cggtcagcag ttcgtcatca
    11881 gggcgtcacc gccaccaccg gtggccttgc tgcggcgctg ctgggtcaga ctttcggtgt
    11941 tgtcgagact gtttttcagg cggctgaatg cctgactggt ttcatccgcc ctgtcagtca
    12001 cctcctgctt aagtgcggaa aaggcggttt ccacctcagc gaggcgctgc tcagtggcgc
    12061 tcagtttttc ctgcacatgt tcagcaacag cggtcaccgc ttcatgcacg tcattcagac
    12121 gggcgtcatc gctggcctgt ttgcggccaa aaatggattt caccttttcg gtcagggcgg
    12181 tgaacacggt ttcaggcagg tcttcaaatt ccagctcaac gggcgttgcc actgaaatca
    12241 ggttttcagg gcttaatttg aagcggttca gggggttgtg ttttgccgtg cggcagaatt
    12301 ccaggtattc cgtgccgagg cttgccgggt catcggtgac ggccagcccc accagataac
    12361 atttgccggt gttggcaaag ttcggctgaa tttccattga ggtgtagacc ttctgcgcgg
    12421 ccttgttcat cgcgataagg tcatcggtcg gggtgatttt cgcaaacagc gcccatttgc
    12481 ctttcagcgc cgaatcgtca tcaatctttt cggccttcag ttcgaccaca tcgccataac
    12541 gtttaaaaat accgtcaggc aggatgccgc gcagatgttc caggttaatg cggcaaccgt
    12601 agacacgcgg gtcaaaggtt tcggccattt cctgaatatc ctgcgcactg atgacacgcc
    12661 cgtcacaggt gtcaccctca acgccgatac gaaagaattt tgagactttt tttgccattg
    12721 tcaggagtcc tgaatagtga ttagaggagt cacatgtcgg catcagtttc ccgacgatgc
    12781 gcatcctccg ccatcagtcc cggatggctt atcactgaca caacagcacc ttagcgaatc
    12841 gcggggcgcg actcagtagc cttgccgtgt attcatcacg gcgaggtatt catgaccatc
    12901 accacagaca ccactctttt acacgacccg cgtcgtcagg cggcgctgct gtactggcag
    12961 ggattttccg tgccgcagat tgccgccatg ttgcagatga aacgcccgac ggtgcagagc
    13021 tggaagcagc gcgacggctg ggacagcgtt gcccccatca gccgtgtcga aatgagtctg
    13081 gaagcgcggc tgacccagct catcatcaaa ccgcagaaaa ccggcggtga cttcaaggaa
    13141 attgacctgc tcggacgcca gattgaacga ctggcacggg tcaaccgtta cagtcagacc
    13201 ggcaacgagg cagaccttaa tccgaacgtc gctaaccgca acaaaggcgg gcgtcgcaaa
    13261 ccgaaaaaga attttttcag tgacgaggcc atcgaaaagc tggagcagat tttctttgag
    13321 cagtctttcg actatcagtt gcactggtat cgcgccgggc ttgagcaccg catccgcgat
    13381 atcctgaaat cccgccagat tggcgcgacg ttttattttt cccgcgaggc gctgctgcgc
    13441 gccctgaaaa ccggccataa ccagattttt ctgtcggcca gtaaaacgca ggcgtatgtg
    13501 ttccgtgaat acatcatcgc ctttgcccgt ctggttgacg ttgaccttac cggtgacccg
    13561 attgtcctgg gcaataacgg cgcaaaactg atttttctcg gcaccaactc caacaccgca
    13621 cagagccata acggcgacct gtacgtcgat gagattttct ggatcccgaa ttttcaggta
    13681 ctgcgtaagg tggcatcagg tatggcctca cagagccacc tgcgctcgac ctatttctcc
    13741 accccgtcca cgctggcgca cgacgcctac ccgttctggt cgggtgaact gttcaaccgg
    13801 ggacgcgcca gcgccgccga acgcgtggaa atcgacgtca gtcataacgc ccttgccgga
    13861 ggtcttctct gtgcggacgg ccagtggcgg cagattgtca ccattgagga cgccctgaaa
    13921 ggcggctgca cgctgttcga cattgagcag ctcaaacgcg aaaacagcgc cgacgatttt
    13981 aaaaacctgt tcatgtgtga atttgttgac gacaaggcat cggtgttccc gttcgaggag
    14041 ctgcaacgct gcatggtcga cacgctggaa gaatgggaag actatgcacc ctttgccgcc
    14101 aatccgttcg gctcccgccc ggtatggatt ggttacgacc cgtcacaccg tggcgacagt
    14161 gccggatgcg tggtgctggc accgccggtg gtggccggtg gcaaattcag aatacttgag
    14221 cgtcaccagt ggaaaggcat ggactttgcc acccaggctg aatccatccg caaactcacc
    14281 gaaaaatata acgtcgaata catcggtatt gatgccaccg gcctcggtgt cggcgtgttc
    14341 cagctcgtgc gctcgttcta tcctgccgcg cgcgatatcc gctacacacc ggaaatgaaa
    14401 accgcaatgg tgctcaaggc aaaagacgtt atccgccgtg gctgtctgga atatgacgtc
    14461 agcgccaccg acatcaccag ctcgtttatg gctatccgca agaccatgac cagcagcgga
    14521 cgcatcgcca cctatgaggc cagccgcagc gaggaagcca gccacgccga cctcgcctgg
    14581 gcgaccatgc acgccctgtt aaatgagcca ctcaccgccg gtatcagcac cccgctgaca
    14641 tccaccattc tggagtttta ctgatgagca agaaaaaagg gaaaacaccg caacctgcgg
    14701 caaaaaaaat gaccgccagc gccccgaaaa tggaggcatt cacctttggt gagccggtgc
    14761 cggtactcga ccgccgtgac attctggatt acgtcgagtg catcagtaac ggcagatggt
    14821 atgagccacc ggtcagcttt accggtctgg caaaaagtct gcgtgctgcc gtgcatcaca
    14881 gctcaccgat ttacgttaaa cgcaatattc tggcctcgac atttatcccg catccgtggc
    14941 tttcccagca ggatttcagc cgctttgtgc tggattttct ggtgttcggt aatgcgtttc
    15001 tggaaaagcg atacagcacc accggtaagg tcatcagact ggaaacctca ccggcaaaat
    15061 atacccgccg tggtgtggag gaggatgttt actggtgggt accgtccttc aacgagccga
    15121 cacctttcac gcccggctcc gtatttcacc tgctggagcc cgatattaat caggagctgt
    15181 acggcctgcc ggaatatctc agcgccctta actctgcctg gctgaatgaa tcggccacgc
    15241 tgttccgccg caagtattac gaaaacggcg cacatgccgg atacatcatg tacgtcaccg
    15301 atgccgtgca ggatcgcaac gatatcgaaa tgctccgcga aaacatggtg aagtcgaaag
    15361 gccgcaacaa ctttaaaaac ctgtttctct atgccccaca ggggaaagcc gacggcatta
    15421 aaattatccc gctcagtgaa gtggcaacga aggacgattt ttttaatatc aaaaaagcca
    15481 gcgccgctga cctgctggac gcgcaccgca tcccctttca gttgatgggc ggcaagccgg
    15541 agaacgtcgg gtcgctgggc gatattgaga aagtggcaaa ggtctttgtc cgcaatgagc
    15601 ttatcccgct acaggacagg atccgcgaga taaacggctg gctcggccag gaagtcatcc
    15661 gctttaaaaa ctactcactg gacactgaca acagctgaac atcgccgcct gcgggcggct
    15721 tttttacacc ccgtcatcac gccctcatac gctcaccacc gcacaaaaca ccccgcagac
    15781 acaccaacgg ccccggcgaa caatctaaac gccatcacga cgcgctcaga cgctgaaaaa
    15841 ataaaatcag caccaccgcc agcgcgcagt gctttccccg cctcgcccgc ccgctttatg
    15901 ggtcggtttt aatgcaggtg cacgaataca ccggaggcgc gccggcactg gtggcgctca
    15961 gacgcaacag gggaggaaaa cgcatgcaat tgaatgcatt tctaggcaca cctaaaaatg
    16021 aaaaaatgtt atgacaatta atcattttaa acacactgat taagggtaga attctcctag
    16081 taaaatcata gaaaaaccgc tatcaaacca ggcttttgcc ttgcttcatt tttttagatg
    16141 agtctaaaaa tttgaaatta tcattagatg aaaatattct ttctgcggta tgccgaatga
    16201 ctgaagtatt gaagaccgca gcctgctcct cattacaact gaatacaccc tcatgaccat
    16261 caaactcgcc cgccaaaaga aggttttttg atactgggaa caaaactaaa gtgtctttta
    16321 caccaaaccc gggggaataa gggcctcgtg ctaattcagg attagtccac attaagcaaa
    16381 ctgggttatc tgaagttata aatgaccctt gcccatcaga tatggtcata agtgaccagt
    16441 tgcgttgatg caacaacttg gtgataacag gtacacattt catttccata tctatcatga
    16501 actctctgat tacattgatt tcgaaattat ccccatccac aaaattttta attttttcgt
    16561 aagcgagatc atatggcaaa gactcaccca tttctttctc ataagctaat ttgcaatcgt
    16621 cccaacgctc agccgaacta actgaggatt tcatgataaa ctttgctatt tgtttcaatg
    16681 gagatgataa atgttctcgc tgagcaggcg tacgtattgc caataaggaa ataaactcca
    16741 gaataacatc tttggtttcg cctgaaaact cgcccccctc ctcaagtttt cttaaatgag
    16801 tagcgacact gccttcaaac tctgcaagag aactctcgag atagtttggg tcaactccat
    16861 ccaattctaa tcggttgaaa tctctaaccc ccccgacatt gcgagtatta ctctcaaagg
    16921 ttttgcgctc ctttaaatct attacagtta attttgattt tttcccccca ttacttgtaa
    16981 accctttcaa ataacattgg gataaaaaat gatgatgcct tgcaacactc atactcagct
    17041 ccgttatggc tataatcgca taaataataa gcacttatat tgcaatcatc tagttaaata
    17101 cacaatattt atgactccga aatttcatta aatcactatt gataggtttt accaattagt
    17161 gccagctcga aatggatgcg tggaatctgc gaacgttcag cctttgtcat ccgccctgat
    17221 ggcgctatct ggtacggttt taatggttcg cagtttcttt gttgccaatt cggtctcggt
    17281 gcaccatgtt ttaatgcact cctgagcacc gtcacaactt ccgggtcatc ccatccgata
    17341 acaccactat caaccagatt taacaccgct gcggcatgct cagacggtgt agggtgcata
    17401 accggaacgt caccgccggt gaactttcca cagttattga caggactccg aggcgcggcg
    17461 atgccgcttt ttaaagtcaa aggctcaacg accggcactt tcggcacaat gcgccagtcc
    17521 gtcgttctgg tgatatgaat atgacgcgcg ccgagatgcg gcgcgtaaat gccgaccact
    17581 ctctcgactt cttcctcgta ctcgttaact tcatccgacg ggctacgggc gaccctgaca
    17641 gtctgacaat cgcgcgggac atttgcccca ccctgcgcgc tgatatacaa cgcaaaatca
    17701 ccactgtctg cggcggcgcg agcagcctcg acgcgctcgt caaactcatc agcaatgctg
    17761 acgccgcgcg gcaatttgcg tagttcacgg taagccccca ttgtcggcag accaaccgtt
    17821 ttaaattgtg ggatgcgcca cgttgacgcc catgcggtaa cagccgcggc agtatcttta
    17881 agcggcttac cggtatcgtt atcgagctga ccatccagtg catagccgtc gatatttttt
    17941 gagatgtatt tcgcgatata ccccgcagca ccgccccggt taaggtgttt cgcctgaaaa
    18001 cggtttcgcg cagctcctct ttcgtcgcca tcctctttga gcgcatagcg acgcatgatt
    18061 tcgataatct ggttacgctg gcgcggatta caaaaaagca tcatatgcca gtgcggcgtt
    18121 ccgtcgtggt gtggctcgac gacacgcaaa ccgtagacct gtaaatcatt atccttgaat
    18181 gccgtgcgca tcaggctcca gatacggcag agataacgct gcgcatcctt tggattaaat
    18241 gcctcatcgt tccagccgtg atttagctgg acggttttac tttcgccttt tctgacctga
    18301 cgtgtcgggt gatactttga cggcgcggtc agcgtgataa acatccccac atcaccctct
    18361 gctgcggcgt aacgctcaat accggcaatg gtgttcatca gctccatccg gcgaatttca
    18421 ggattagaaa tactgcccat caccttactg ataaggtcga tgcgctcgcc ggtttccctg
    18481 ttttcaaggt cacatgattt aagaaattcc agatttgcct ggcggcgcgc acgcacatca
    18541 cgaatggcat gtttactggc ataaggagaa cggtctttat tgacctcccc gacagctatc
    18601 agtaacgcct catgccagcg catacgctgg cctttaagct gatgagtcca ccactcatcg
    18661 ttaaacaggc gggcaatggc agaatatgcc tgcctcgtgg tcatctgtcc tttacggtat
    18721 tttttccagt agagcgggga aatattgaaa gcacgtgcag cgccagcaac atgaccataa
    18781 aggtgagcct gcgcctcatc cgtaaacagc gattcttttt cgccatgtgc atcaacccag
    18841 gcatcgcaga gttcctcata catcatgaaa agctgcgatg agatacgggc agcaaacttt
    18901 ttcagctcct tgtcattcat tcccggcagg cgcgcatagt ggtcacgctc tgccagaaac
    18961 agcaacgacg cgtcggtgtt catttcatgg cgctgattca cacgctcaat gcgcggccat
    19021 aaacgacgct gaaaagtgga tgtgaggaaa taaaacccgt gcaccgggct tttattgcgc
    19081 cggatgtagt cataacgtga agtaaacagc gagcgcaaaa agtaaggcag gcggttaatc
    19141 gtggataaaa caccttgcac ctgacgcatc tcgtcacgtg taaggggtct ttcgcgcccg
    19201 acagcctcgc gtggcgcgtt ccatgcataa gcaccggtaa acgtcttacc ggtgcctgcg
    19261 gcaaatgctg acggagggac aaaacgcccg gaggctttaa cggccatatg agccaaaagc
    19321 ctctgaacaa cgcctgctga gttgctcaac ctgcgcgttt aaatcagcaa aagactttgc
    19381 gcttccggtc agaatatcgt gatgcatcag gccggaaacg agctggctta atttcgggta
    19441 ataaccaacc accgccagcc attcctgacc ggcgttttta ccgctttccg ctctcttttt
    19501 ctcgtggaga ataaactgaa agctgtcact ggtaacgaca taacgttcgc caatttcaat
    19561 acgaatgctc atgccattct ccggtaatgt ttgttttttg cttcaaagac tgactgacag
    19621 gaaacacaac gcgtggctga cggataagcc gcacgacggg cagcaggtat tggcgcgtca
    19681 cactcttcgc aaaccagcga agaaacaccg caatgtttta cccttgccgc gttaatctgg
    19741 cgctccagta attcagtctg ttgttcctga ataaaatcta cgttgtccgg cattaccagt
    19801 tccttttgtc gttcagtttt ttaaattcat cagcgcaata gctggcaagt tctgtcgtta
    19861 attttgtcag ttcatccact gaggaaattt gcttgtggaa tacagcgcgt ttaacaagta
    19921 aattgaccac atcagacagg aggtttaatt cgttctgata aatcgcgata acagactcag
    19981 ttatttcgcg tttttcttta tcaagaccaa gttgaataag agacaaatcg ccatttttca
    20041 taacggcgat ttttaaggcg ttattcagta atacaactga acgagaacag gacatcaaag
    20101 cacctccccg cgagacaatc cgatattgtg aaatttttcc gactcctgac tgagcagctc
    20161 gactatctcc acgcgggata actccgcctt tgtgatgtgg cgaatcatgg catcaagatg
    20221 agaagaaaag cgcgtcgcag cgtcggcctg tgcttcggtt ctggcctgtt gcagcagtaa
    20281 tgcgtattta ccgcactgat tttcagaaac tgtatgcata actttctcca ggcaaaaaga
    20341 agccccgcac gattaagtgc gttaaaaact ctggttaatt acttaatgca gatattgctc
    20401 tggttttacc gacgtcagaa ttgtcggtgc atactcaaac aggctgaata attcacgtaa
    20461 tgcacggaat aaagcatcac gccagtaaca tgactcttca ttaattcgcc agtatggctg
    20521 gttgaattct ttttcagtca atccggcatg cataaataaa gtacgacgct gactgactgt
    20581 taaaaaacta atatatgcat actcacttgc gccaacctga cggcgttttg agaatgcccc
    20641 acgcaattca tcaattgcac ataccagtcg ttcacgttcg acatcattca tttcttcaaa
    20701 acgcatcgtt gcgtgacgct gttttaactg cgcatggaag caaaccgtta gccgttcacg
    20761 ttccatcatc tgattataat aatcgcatgt ctcctgccag cgagggacgg ccagatgctt
    20821 accaattatc cggcgcatag ctgctggctg tttttcaaca agattgagcg tcatcactgt
    20881 catttccaga ccctccgact tttcagaaag gtcagagcct tctttaacgg actctgtttt
    20941 ttggtgcgga taatgattcc cttgcgtccc ttaccgtggg taatggtgaa gtcaatcgcc
    21001 ctggggcttt cgttacgcag taactgagca atacaacgag gctcattcat acggttctcc
    21061 ttaacgtggt tcaccgagac ctaaccacat caaccagccg tcacgaatct ctttagggcg
    21121 gctttcataa gccagtttta gtccgttatt ccatgccgga aggtataccc aatattcacc
    21181 tgcacgacct gaagctgatt gtggatcggt catatcaatt acaggcagct ttcctttatc
    21241 gatcatccga cgaaccgctc ctgtcgattt tcctattagt tttgcgaact cctgataagg
    21301 aatcgcatca gtcatgagtg ttacttgctt gctcatgtcg tcctccagcc ctcatgaatt
    21361 gcgtttaatg ccttataatg ccttttagtg cccacatcca agcactaaac aatctacatc
    21421 taaactaaat actattgaga tctaaacact atgtcaaaca cgataagcga gaagatagtc
    21481 ttaatgcgaa aatctgagta tttgagcaga caacaacttg ctgatttaac aggggttccg
    21541 tatggcacgc tgagttacta tgaaagtggt cgttcaacac ctccaacaga tgtcatgatg
    21601 aacatcctgc agaccccaca attcaccaaa tacactttat ggttcatgac aaatcagatc
    21661 gctcctgagt ccgggcaaat tgcgcccgct ctcgcacact ttgggcaaaa cgaaacaacg
    21721 tcgccccact ccggtcaaaa gactggttaa caatttatcg tgaatatatt catcacaagt
    21781 gcctactatt ggtggctaaa tttcagccac cacgaaaaaa gcgattagta gtagcaaaaa
    21841 aaagtaccac tcggagggtt ttctgatggc aatcaaaaaa ctcgatgatg gtcgatatga
    21901 agtggacatc cgccctactg gacgtaacgg aaaacgcatc cgtaggaagt ttgataagaa
    21961 aagcgaagct gtcgctttcg aaaaatacac gttgtacaac caccacaata aagaatggct
    22021 atcaaaacca acagacaaac gacgtctgtc ggaactgaca cagatctggt gggatttaaa
    22081 gggtaaacac gaagagcatg ggaaatctaa tcttggaaaa attgaaatct tcacaaaaat
    22141 aacgaatgac ccatgcgcat ttcaaatcac gaaatccctt atcagccagt actgcgccac
    22201 ccgaagaagt cagggtatta aaccttcgag tatcaatcgt gatttaacat gtattagcgg
    22261 catgtttaca gccctgattg aagcggagtt attctttggt gagcacccta tcagagggac
    22321 aaagaggctt aaggaggaaa aaccagaaac aggctatctc acacaggaag aaattgcctt
    22381 actgcttgca gcacttgacg gcgacaataa aaagattgcg attctttgcc tgagtacagg
    22441 agcacgttgg ggagaagcag ctcgtttgaa agcagaaaat atcatccata accgcgtcac
    22501 gtttgttaaa acgaaaacaa acaaaccacg caccgtcccg atctcagagg ctgttgccaa
    22561 aatgatcgcg gataacaaac gaggtttttt attccctgat gctgattacc ctcgcttcag
    22621 acgaacaatg aaagcaataa aaccggattt gccaacgggg caagccacac atgcactaag
    22681 gcacagcttt gccactcatt tcatgattaa tggaggaagt attatcacgc tacaacggat
    22741 actaggtcac acgcggattg agcaaactat ggtttacgct cattttgcgc cagagtacct
    22801 tcaggacgcc atttctctta atccgctaag aggtggtact gaggccgaga gtgtccacac
    22861 agtgtccaca gtagagtaac gtttaagggc tttcagtggt aatttatgcc gctcaaaccc
    22921 gcattgtacc gttgaaagcc cctactggtg acaccctaaa tctcccttac acgggcttat
    22981 ttttttatgc ataagcccta tctctggtaa ccgtcttcca ttgaccacat cgatagaatc
    23041 ctccttcata gcacgatgcc tttcacttat cggcatcgtg ctcccacagg ttccggctac
    23101 gcacagccag aacgcgcata gttgacgctt accaaaaaat attctcactc tccacatttg
    23161 aatgtcagac gagcgacacc atgtaatcct acaccttctg tcttcagctc aactatttgc
    23221 atttttttgc cctgagtaac acagaaatga gttgcatcat tttttactat attttctgca
    23281 ccagatattc tacccctggc taaagaagct tcggcttcgg tgtagtattg gttatcgagt
    23341 ttacgctgaa tattactttt atatgcaaga ccaaatttac cgatacttgt ctcatcatta
    23401 tgcacagcac aaccagatat aagaaaaaca ctagttaatg atatagcagc tatctttttc
    23461 atctcacctt cccccattaa ataccaacga cactctctag tgtttaaata taataatggc
    23521 atgattatta taattgaata ggattataat aaatgttctg tacaacattt cctacataag
    23581 taggaattac ggacattgag gcccttcagg gtaactccat gggggcttta atatattata
    23641 ttgaagatgc cactgtttag ttgaatatta ggtatatgct cttttttgaa atttatcggt
    23701 ggttaccgtt aatattcgct gttcccattg caagctcctg gtggtaacca ctgaatcctc
    23761 catacttgaa ctgacttttt atcctccgac tttcatcctg ttctgactcc accttttctt
    23821 ttctgctcta cactatctac agaccaatca taaaggcaca tacgatcatg gcagaatttc
    23881 ccgccagctt actgattctt aatggcaaaa gtactgacaa tctacccttg cgcgaagcaa
    23941 ttatgctgtt gcgtgaggaa ggaatgacga tccatgtgcg ggtcacctgg gagaaaggtg
    24001 atgccgcacg atttgtagag gaggcccgga agttgggcgt cgcaacggtg attgccggtg
    24061 gtggcgatgg caccattaat gaagtttcta cggcgttgat tcagtgtgag ggggatgaca
    24121 tacccgcgct gggaattttg ccattaggaa ccgccaatga ttttgccacc agtgtaggga
    24181 ttcctgaggc actggataag gcgctgaaac tggcaattgc cggtaatgcc attgcgatag
    24241 atatggcgca ggtcaacaaa caaacctgtt ttattaatat ggcgacaggc gggtttggga
    24301 cgcgtattac cacagaaacg ccggaaaaat taaaagccgc gctgggtggc gtctcataca
    24361 tcattcatgg cttaatgcgt atggatactc tgcaaccgga ccgttgtgaa atccgcggtg
    24421 aaaactttca ctggcaaggt gacgccctgg tcattggtat tggtaacggg cgtcaggccg
    24481 gtggcggtca acaattgtgc ccgaacgcgt taattaacga tggcttgctg caactgcgca
    24541 tttttaccgg cgatgaaatt cttccggctc tcgtatcaac tttaaaatct gacgaagata
    24601 acccgaatat tatcgaaggc gcttcgtcgt ggtttgatat acaagctcca cacgaaatca
    24661 cttttaatct tgatggcgaa ccgttgagtg gacaaaactt tcatattgaa atacttccgg
    24721 cggcgttgcg ttgtcgatta ccaccagatt gtccattatt gcgttaatca aactattctc
    24781 tcttgaacca gggagaatcc gtaatgccgg atgaggtgta aataccttat ccggcataca
    24841 gaacaatact acaccgtaat taattttacc cgtgtcttct gcaatgccag tttatccacc
    24901 tctgatacag catcatcggt aataataatg tcaatttttt cgattggcag tacctgatta
    24961 aaaccgcgac ggttaaattt cgatgaatcg agaacggcaa tcactttatt agcggcggtg
    25021 accatcgcac cgctaatcga ataaccttca ttaaaggtcg taataccatt aaccgcatca
    25081 ataccatcag caccgacaaa cattaaatcg gcattaatat cctgcaatga ccgctcggca
    25141 atggaaccat gcatcgagcg cgttttatgg cggaccgtgc caccacagac gaccagagta
    25201 atgtctttat tttcggaaag ggcaaacgct gccgggagac tgttggtaat caccgtgata
    25261 tttttagcgg tcattaatcc ttcggcgata agcattgtgg tacttccgct gtcgagaata
    25321 acggtcatcc cttcatggat cattttgact gccgcctgcg ctattctgtt ttttggcgcg
    25381 ctggcgagct gaaatcgctc tttaaacccg acttcctggg tctcggtttc actattaccg
    25441 gacattattt tcgccgcacc gccatgaaag cgcgtaacca cgcctttttg ttcgagaaag
    25501 cgcaaatcgg cacggattgt cgcttccgag gcagcaaata ctcccgccag atcctgaaca
    25561 agcacggttc cctgttcatt cactaattgg atgatcttat tccttcgctc gaatgaattc
    25621 atcgtcattt acccatattc aattgtggct agtgtaaacg aagggggacc attggtgaat
    25681 gatctgtttt gcacaatacc gggccagcat cacgctggcc cgcggtttca tggaatgagc
    25741 aacactttgc ccggcatggc attacgagcg atgtcacgca ccgcctgggt gaagctttca
    25801 aagcttccac ggtgagcgat taatggctcc aggcttaact tacgttctgt cagcaaccgg
    25861 ctcgccgttt cccactcctg ccccggccaa gggctggaat agttcatcca actgccgata
    25921 accgtcagct ctttacgcaa tattttgcca aacgttgccg atgttaaatg cagatcctga
    25981 tgcaacgtgc ccaccagcgc cagttgggca tgaggaccgg caatctctac cgccagttcg
    26041 acagtttgcg gtacgccagc cgtctcgagg ataagctgat taaaacgcag ttcgcgtaaa
    26101 acgctctgca tttgcggcgc gctcatttcg ctactgttaa atgtttgcat cgcaccgaaa
    26161 aattttgcca gtgccagttt ttctgagcta atgtcgatag ccgtcacact ctttgctccc
    26221 agcgcgacag cgcactgaat agccagcagg ccaatggttc cggcaccaat aataataacg
    26281 tttttattct cacaaccttg cgctaaatga aaagcatgca gaccaacggt aatcggctca
    26341 ataaaagccc catcctcaat aggcatatcc gtgggtagag caaagacatt ttttcgctta
    26401 acgacaatat attcagcaaa tccaccatca cgccgcgagc caataaaatc atattttgcg
    26461 cactgggaat aaaacccttt cagacactct ggacaagtaa aacagggtaa taacggcaca
    26521 caggcaaccg catcgccagg gtgtaaatca tcaacaccgg atcccaccgc atcaatatag
    26581 ccgctaaatt catggcctaa cgttattgga taataatgtg caccattttt aaatatcctg
    26641 ggtaaatcgg aaccacataa gcccgagctg gcaattttta cccgcacctc atcctgatgt
    26701 ttaatttcag gaatgacgct ttctgcaacg cgcacgatac catcagtatc attcaccact
    26761 gatttcataa aaactcctga ttgttaaggg ggataacctc cccctcaggt aaaaattatt
    26821 ctgcgagaac gactttctct tgtttaataa agccacgcgc tctacgccag gtcatgaaaa
    26881 taccggtcag ataaattgca ccgataataa tgaaaccggg aatattttgc ggggagaaaa
    26941 actgaatcag taaccaggta atgggagaac cgccctgatc cattgaagtc accatacccc
    27001 cggcttttaa cgccccagca ttagccgcca gttgggtgtg caaaccaata gtttgcgtcg
    27061 cgatccacag agtgatgctc atgatgatga cacccgagat taaggtgcgg aacagatttc
    27121 cacgatgcac ggcgactgcc atcgccacaa agaagccgat ggtggcaaga tcgccaaacg
    27181 gcagcacctg attacccgga acacaaacag caattaaaat ggtgagcggg ataaaaatca
    27241 ggcttgccga taccaccgcc gtatgcccca gcagtaatgc gggatccagg ccaatcagga
    27301 actcctgacc gccgaacttc gcctgtaaac gactacgggc ctgcttagcg atgggcgtta
    27361 aaccatccat gatgggttta atcacccgtg gcattagcag catcactgcc gccgttttta
    27421 ccgccagctg caatacacct ttgacatcgt aacccgcgag gatgccgata atcagcccca
    27481 tcacaaaacc cacggtgaca ggctcgccaa atggaccaaa tttgcgctga atatcgtcgg
    27541 cgctaaattt aattcggtta acgcctggga ttttctcgat gatagcatcg accagcaccg
    27601 caatcggccc catatacgcc gacgtaccgt gcggaatagc aataccttcc agctcaaaga
    27661 aatttcgggt atcgcgggca aaccagtcgc cgagcttata aacaaacgcc gcgtgaatta
    27721 ccacacctgc catccctatc atccatgaac cggttgccag atgcagcaac gcgccggtga
    27781 aggtcatatg ccagatattc cagatatcaa tatttaccac ccgcgtcata cgggtcagta
    27841 acatcgccac gttaaccaga atcgcaatcg gaatcgccac cagcgcaatt tgcgacgccc
    27901 aggtcattgg tgaagagccc ggccagccga catcgaccac atgcagattc aggtcgaaat
    27961 tttccgccat cgctttcgcc gccggaccaa tggaatccag cattaagcca atcacaaggc
    28021 caatgccaac aaagccaatc ccgatatgca gacccgcttt aaagcaatcg cctgccttca
    28081 tgcctaatat tttagaaaaa ataatgatga caatcggaag catcaccgta gggccgaggt
    28141 cgagaatata acgcatgact tctgaaaaca taggtcaccc ctgtaagata gtcagaattt
    28201 tattttgtaa tgcttcgata ccgataccag aaataaaagg catgccgtga actaacggaa
    28261 tatcgccaaa actacgatcc actttggcag tggtgcatat caaatgcaca ccatccatat
    28321 aggtttctat ttcattaacc cgacactgga ttaattcaac aggaatatta tgattctgac
    28381 acaactcttt aatttcttcc gccgccatcg tagaggtcgc aaccgcgcct ccgcaagcga
    28441 caataatctt gcgtttcata aatagtcctt tttattgtta cagagggatt tattcgtctg
    28501 aatctaaaac atactttgtg aagtattcct ttaactgggt ttcaggaaga gtgattagtg
    28561 tctcgacgat atcgggctgt tgtaacttgc caaataaaca gcgtaaaagt ttcaattgct
    28621 gctgcggatt ttccacaatc aacgcaataa ccaacgatac ctccacgtcg ttatcatcat
    28681 ccgcttgctg aaaatgaact ttatttgttg gccttaacag ataaatggct gacgacttag
    28741 catgaatcgc ctcacaatgc ggtattgcaa tggcgtgctg ctcaagcatt atcccggtag
    28801 ggaattctgc ttctctggca attaatgcct gtggcctggt atcatgaacc acacctttgg
    28861 cgagcatctc attaccgata tgggttaaaa cttcgctacg atcgacaaaa gaaattccgc
    28921 tacgaacaaa caggttagtc atataccgtc cttattccgc acagccgtag cgataggcgc
    28981 gcaaaacatc ataaatttta tccataatca gctgatgcgg tattgctgat aattccccgg
    29041 actgaatgcg ttcaaattgt ttgggaagat actgactaat catgcccagt gggatgtcca
    29101 cgccttcaag attcaccatc atcgtttcga cgctattttt aatccgacta tgcggccagt
    29161 aataacgaat acgatccgac aggctgtaac gaatatccag taatgaatcg ttaaaacccg
    29221 tacgataata ttttttccag tattgcggtt cgtcgagcat cacttcttca attaccgcca
    29281 ggcaaccgct gcgattttcg ggggcgataa gttcctgctc aatttgtgcc agtgcaaata
    29341 tcgcctcgcg taaagcaaag gttaatgcgg gaccgacttt caatattgca aagtgatcgc
    29401 ggactaattc ccaataagcc gttcgggtct ggtaatcggt agaatgtgct tcataaacca
    29461 ttcgggtgtt ttctatccat tgcgccagcg cctgcgcttc ctgcggctga taatggataa
    29521 tattgctgtg atcaaattcc acacccggct gcaccacgat ggcaatcaca cgtgttaacg
    29581 cctctgtcag cccacgggca ataaaggcct tttgatgcgt acgtaaagta ttggcggcat
    29641 cttcaacatg ggtgatgtgt actgactgaa tggcgctggc ctcaccgccc ggaaccggaa
    29701 cttcggtgcc aatgacatag ctcagttgct cacgctggca atctgtcgcc acactttccg
    29761 cagcaaagca aagcaaagca cagcagctcg ttccgcaacc gtttctggtg ctaacggtat
    29821 gggatccccc gcgcaggaca ttgacgcatc aagatgaatt ttactgaagc cagcacgaac
    29881 atatgctttt accagctcga cggatttttc catcgccgca tccgcatttt cttgctgcca
    29941 gcagtttggc cccagatgat cgccgccgag aataatgcgt tcgcgtgcaa acccaacttt
    30001 atcggcaatc gtaaaaacaa attcgcgaaa gtctgccggt gtcattccgg tataaccgcc
    30061 aaattgattg acctggtttg acgttgcttc aatcagcact ttgcgcgtgc tgttgcgatc
    30121 aaatgccagc gccgcttcga taaccaacgg atgggcagaa cagactgaac atatgccgat
    30181 atgttcacca gctttatgcc gggcaattaa cgttttcatg ttttttcctt gttaaatggc
    30241 aggtgcgtta tgccctgccc tcgcagccac aatcggcaat cactttgctc accacatcgc
    30301 gcattgcgga tttagccgac tgcaaataat cccggggatc ggtcgcttcg gggtgctcgg
    30361 tcaggtaatt ttttaacgcc tgcgagaagg catttttcag ctccgttgca acgttgattt
    30421 tgcatatccc cagtttgatg gtttgctgaa tatccttagt cgataatcct gacgcgccat
    30481 gcagcaccag cggtaagttc acccactggc gaatgttctc cagtcgagaa aaatcaagcg
    30541 ccggtgcgct ggcatacata ccatgagccg tgccgatggc gaccgccagg gaatcaattc
    30601 cggttgcctc ggcaaattca cgcgcctgag cggggttggt ataaaaagca tcggcttcat
    30661 tgacttgcac atcatcttcc tggccgccaa gttgccccag ctccgcttcg acgctgacat
    30721 caaagcgatg gcaaaaatcc accacctctt tgacccgtga aatattttgc gcaaaaggca
    30781 aatgcgaggc gtcaatcatg actgagcgca cgccaaaacg aaccttctga gcgatatcgt
    30841 caaatttcgt gtgatggtcg agatgaattg ccagtggatg gtgatattgc ttcgccatcg
    30901 cgctgaccag cgccaacaga ttttctgtac cagcatgagt aaatgtgcca ggcgttccgg
    30961 cgatgatgac cggcgcatgc aggttggcag cggtttccac caccacttgc atcgtttcga
    31021 gattgtgaat attgaatgcc ggaaccgcat aaccgccgcg ctgtgcgttg ttcagcatct
    31081 gctttgtcga taccacgtac attttcatat cctgctgttt gttttcgatt tcaaaatata
    31141 atgaaattat ttgtttttaa atatcgagat aacgatcaca aaaacgacaa tatgaaaatt
    31201 gttcgaggag tgaaaggcaa aaaaacggcc tcccgatagg gaagccgtag caaagtgcgc
    31261 gtgtttttat gccggatgcg gtgtaaacat acgtggcagt gctatgtagg catgataaga
    31321 cgcttcagcg tcgcatcagg cataggttgc cggatgcagc gtaaacgcct tatccgtcct
    31381 acggggtggt gttgttcgta taaggcgtat caggcgatag taattttgct atcgagataa
    31441 acgtcctgca cggcgttaat cagtttcacg ccgtcagcca tcgatttctt gaacgcctta
    31501 cgtccaagaa tcagccccat tccgccagcg cgtttgttga taaccgcagt acgcactgca
    31561 tcactgaggt cagtttcacc gcctgcagca ccgccggagt ttatcaaccc tgcccggccc
    31621 atatagcagt tagctaactg ataacgcacc agatcaatcg ggttttcgct ggttaacttg
    31681 ctgtacacgc gatcgtcggt ataaccgtaa ttaatcgctt tataaccgcc gttattttcc
    31741 gccattttct gtttgacgat gtccgcgcca atggtcgccg ccagatggtt cgcctgacca
    31801 gtcaggtcgg cggaaacatg gtaatcaacg ccatctttct taaaggcgga gttacgcaaa
    31861 taggcccaca gcactgtcac catgcccagc tcgtgcgcac gttcaaaagc cgcagaaatt
    31921 tcttcaatct ggcgacgtga ctcttccgag ccaaaataga tagtcgcacc aaccgcaacc
    31981 gcgcccatgt tgaacgcctg ctccacgctg gcatacagcg tttgatcgta ggtattcggg
    32041 taacttagcg tctcgttgtg attaagtttg acgaggaatg gaatgcgatg cgcataacgc
    32101 cgcgataccg acgccagcac gccgtaagtt gacgccacac agttacagcc cgcttcgatc
    32161 gccagttcaa caatgttttt cgggtcaaag tagagcgggt tagcagcaaa tgaagctccg
    32221 gcagagtgct caacgccctg gtcaaccggc agaatagaaa gatatcctgt gccagccaga
    32281 cgcccggtgt tgtacaacgt ctgcatatta cgtaacaccg caggcgggcg attattgtca
    32341 atcatcacgc ggtctacgta gtcatgtccg gggagataaa gctggtcaga aggaatagtc
    32401 atacaacggt gctgtaaaag gttgtcggcg tctttgccaa gcaactgcgc aatatctgtc
    32461 attactatgc tcccgtaaat tccgattgga tatcggctat ggattttcct ggcccgcctt
    32521 ttgcgggcaa tcataatcct ggtcgttacg ggcgagtttt tccatctttt ggatgttttt
    32581 tcagcgtttt ctgttggctc gattcatcag aaaaaatgtt agcgcggtca agttttcacc
    32641 gcaaaggtat ttaaaaggca ttattaagtg gtattgtcat cgcgtacctt acattacctg
    32701 tcatgaagga attaaaagat gaaaacaaca gcaaagctgt cgttcatgat gtttgttgaa
    32761 tggtttatct ggggcgcgtg gtttgtgcca ttgtggttgt ggttaagtaa aagcggtttt
    32821 agtgccggag aaattggctg gtcgtatgcc tgtaccgcca ttgcggcgat cctgtcgcca
    32881 attctggttg gctccatcac tgaccgcttt ttctcggcgc agaaagtgct ggcggtattg
    32941 atgttcgcag gcgcgctgct gatgtatttc gctgcgcaac agaccacttt tgccgggttc
    33001 ttcccgttac tgctggccta ctcgctaacc tatatgccga ccattgcgct gactaacagc
    33061 atcgcttttg ccaacgtgcc ggatgttgag cgtgatttcc cgcgcattcg tgtgatgggc
    33121 actatcggct ggattgcctc cggtctggca tgtggtttct tgccgcaaat actggggtat
    33181 gccgatatct caccgactaa catcccgctg ctgattaccg ccggaagttc tgctctgctc
    33241 ggtgtgtttg cgtttttcct gcccgacacg ccaccaaaaa gcaccggcaa aatggatatt
    33301 aaagtcatgc tcggcctgga tgcgctgatc ctgctgcgcg ataaaaactt cctcgtcttt
    33361 ttcttctgtt cattcctgtt tgcgatgcca ctggcgttct attacatctt tgccaacggt
    33421 tatctgaccg aagttggcat gaaaaacgcc accggctgga tgacgctcgg ccagttctct
    33481 gaaatcttct ttatgctggc attgccgttt ttcactaaac gctttggtat caaaaaggtg
    33541 ttattgcttg gtctggtcac cgctgcgatc cgctatggct tctttattta cggtagtgcg
    33601 gatgaatatt tctcctacgc gttactgttc ctcggtattt tgcttcacgg cgtaagttac
    33661 gatttttact acgttaccgc ttacatctat gtcgataaaa aagcccccgt gcatatgcgt
    33721 accgctgcgc aggggctgat cacgctctgc tgccagggct tcggcagttt gctcggctat
    33781 cgtcttggcg gtgtgatgat ggaaaagatg ttcgcttatc aggaaccggt aaacggactg
    33841 actttcaact ggtccgggat gtggactttc ggcgcggtga tgattgccat tatcgccgtg
    33901 ctgttcatga tttttttccg cgaatccgac aacgaaatta cggctatcaa ggtcgatgat
    33961 cgcgatattg cgttgacaca aggggaagtt aaatgaaaac agaacgtatt ctcggtgctc
    34021 tttatgggca ggcgttaggg gatgcgatgg ggatgccctc cgagctttgg ccacgcagcc
    34081 gcgttaaagc acactttggc tggattgacc gttttcttcc tggaccaaag gagaataacg
    34141 cggcctgtta ttttaaccgc gccgaattca ccgacgatac ctcgatggcg ctgtgtctgg
    34201 cggatgcgtt actggaacgt gaaggcaaga tcgatccgaa tcttattggg cgtaatattc
    34261 tcgactgggc gctgcgtttc gacgccttta acaaaaacgt actaggtccg acctcgaaga
    34321 ttgctctcaa cgccattcgc gacggtaaac ccgttgctga actggaaaac aatggcgtga
    34381 ccaacggcgc ggcaatgcgc gtctcgccat taggttgttt gcttccggcg cgtgatgttg
    34441 attcctttat tgatgatgtg gcgctggcgt ccagcccgac ccataaatcc gatctggcgg
    34501 ttgcgggcgc ggtagtcatc gcatgggcga tttctcgtgc cattgacgga gaaagctggt
    34561 cagcgattgt agattcactg ccttcaattg cgcgacatgc ccagcaaaaa cgcatcacca
    34621 ccttcagcgc ctcactggca gcacgtctgg agattgcgct gaaaattgtg cgcaatgccg
    34681 acggcactga atccgccagc gaacagctgt atcaggtcgt tggcgcaggt accagcacta
    34741 tcgagtccgt tccgtgcgcc attgcgctgg ttgaactggc acaaaccgac ccgaaccgtt
    34801 gcgccgtcct ctgcgctaac cttggcggcg atacagacac catcggtgct atggcgacgg
    34861 caatctgcgg cgcgttgcat ggcattaacg ctatcgatcc tccgttaaag gcggagctgg
    34921 atgcggtaaa tcagcttgat ttcaaccgct atgccacagc gctggcgaaa tatcgtcaac
    34981 aacgggaggc ggtatgagcg gcgctcgatt acacacgctg ctgcctgaat taaccacgcg
    35041 tcagtcggtg atggtcgtcg gcgcggcggt cattgacgtg atcgccgacg cttatgtcct
    35101 cccctggcgt gggtgcgata tcgaactgaa acagcagagc gttaacgttg gcggctgcgc
    35161 actgaatatt gccgtggcgt taaagcgcct cggcatcgaa gcgggtaatg ccttgccgct
    35221 cggtcagggg gtatgggcgg agattattcg caaccggatg gcgaaagagg ggttaatcag
    35281 cctgatcgat aacgccgaag gcgataacgg ctggtgtctg gcgctggttg agccggatgg
    35341 cgaacgtact tttatgtcat tcagcggtgt ggaaaatcag tggaatcgcc agtggctggc
    35401 gcgattaacc gttgcgcctg gcagcctgct ctatttttcc ggttatcaac tggcctcgcc
    35461 ctgcggcgaa ttgttagtgg aatggctgga agagctgcaa gacgtgacgc cgtttatcga
    35521 ttttggccca cgtattggcg atatcccgga cgcattactg gcgcggatca tggcctgtcg
    35581 acctttagtg tcactcaatc gtcaagaggc tgagattgcc gccgaacgtt ttgctttatc
    35641 cgcagagata acaacacttg gcaagcaatg gcaggagaaa tttgccgcgc cgttgatcgt
    35701 tcgtctcgat aaagaaggcg catggtattt cagcaacgac gcttctggct gcattccggc
    35761 atttccaacg caagttgtcg acaccattgg ggcgggcgac agtcatgccg ggctggcctc
    35821 tggtctgcca ctggcggatg ccgtattact gggcaatgca gtggcgtcgt gggttgtcgg
    35881 gcatcggggc ggtgattgtg cgccaacgcg cgaggaacta ctcctcgcac acaaaaacgt
    35941 atagatcgct gcgacagtgg ctaatgctgt actcaatagg ccgttgctgt tggtcaagcg
    36001 ccacttgctt gatcaccagc accggtattt tgctatctaa ctgaatatgt gactgaaact
    36061 cggcatccgg catccgggcg ctaacgcggg aacgcgtacg ttgtgggtaa atgtgctggc
    36121 tgcggaaata gtcataaagt gaaatcccga tggcatcaac atcatgaatt aaatgcgccg
    36181 gaacccacga ttcctcaatc gataccgctt cttcatcgac atagcgaata cgcttaagca
    36241 aaaagacatc acttcctgct tcgaccgcca gctgctgcgc gacttcttcg ggacatttca
    36301 cgacacgctt gttaacccat agcgtatcgg gctttttccc gcgcaatacc acctgctgag
    36361 aaaaacctcg cgcttctttc aacgagtatt cgaagatgtt gttgatctgc gtgccgtaac
    36421 cacgcgaacg cgtcaccaca ccctcttctt ccagcgcctg catcgccttg cgcaccgtaa
    36481 tgcgcgaaac gccggttaac tgacttaaat cacgctcacc gggcaaaata ttgccatgct
    36541 ccagcacccc gctgcgcacg gcatttttta ccgtttcggc aaacttaata taaagcggcg
    36601 tgttatccgc cgctaaaata cgttcgttca gttgggcaat cagctgggta tgcgcttgtt
    36661 ccatttgtct ttttcctgcc agggagtctg gtgggagtat atcactgctt cttatttaag
    36721 gcgtttcttt aatcccatca acgaacccct gcaactcctc caccgtgcca ttaaacacat
    36781 taaaatccac cggaccattg atgccatcta cctgtccacg gtcggaatgc tgccagaagc
    36841 gccaggccat gccgtcattg tccggacgac gttgatagta gtgagccacc caccacggat
    36901 attcattgaa atagcccgcc agattcgtgt gataaaaaac ggctcctgag taaataatcg
    36961 gctttttccc cgtacttttt tcgaccattt ttagccactg acttaccctc ttgcgtaatt
    37021 cttttgccga taattttcct cgctcttcta cgtccagtac cgcagggaaa tcgccttgtg
    37081 agaaatctac cgtttgcaga aataatcgca cctgaaccgg tgctgctacc gacggggaga
    37141 aataatgata tgccccgcgc agcaggccat tttcacggct tagttgccag ttacgcgaaa
    37201 aataggggtc caccagcttt tcgccttccg tcgccttaat aaaggcaaat tgtaagcgaa
    37261 taccgttatc gcgcattttt gccacacgct gccagtcgat ccgctcctgc cagcgcgaaa
    37321 catctattcc gtgaatggtg taactggcag gaatacgaat agcgaaagat ttaaccgggc
    37381 gataaccgta gaagtggatg tagtctgtaa tctgaactgc tgtcgaatag aaaaaattca
    37441 ccgtctgacg cggataaatt gcaacgatgg aaattagccc aagagcgcat aatagagcgg
    37501 tgagtttttt tcgactggta attcttagct gcattggttt catccctgaa tgtcagtgcc
    37561 aaaggctgac aataaccaaa gcagctatag tacggtgctc accaccaggc gtggaagtgg
    37621 tgaaccggac caataccgtg accaacttcc agcgtgtcgg cctgggctaa cgccgatgaa
    37681 agccagcttt ttgcctcctg tacggtgtca gcccagtttg tatggcgcgg gcgtagtgca
    37741 gccaacgccg cagagagtgt acaaccagta ccgtgggtgt ttttggtcat aatgcgcggt
    37801 gcggtaaacc gttgttcacc ctcgcgggta aacagccagt ccgggctttg ctcatcatcc
    37861 agatgaccac ctttcattag cactgcgcca cagcccatcg ccaacagcga tcgcccttgt
    37921 tccagcattt cctgttcggt gcgcgcgtgt ggcgcgtcga gcaaggcggc agcttcgggc
    37981 aagtttggcg ttattaatga aacctgtggc aataatcgac tgcgcagcgt agcaaccgcc
    38041 gaaggtgaaa gcagcgggtc gccgcttttt gccagcataa cggtgtcgag taccacgttt
    38101 tggatctgat aacgttgcaa ccgttctgcc accgcttcaa caatatcggt ttccgccaac
    38161 ataccgattt tagtggtgtc gattcgcaca tcgctgaaca ccgaatcgag ctgggcggcg
    38221 acaaaatcag gctcaatgcg atacaccgac tgtacgccac gggtattttg cgccaccagt
    38281 gcagtaataa ctgagcaacc ataagcgcca agtgccgaga aggttttaag atcggcctga
    38341 atccccgcac caccactggg atcagtaccg gcaatcgtca gagcgttaat tcgtttcatg
    38401 cctgcacctc ctgcgtcaat tgccagagcg catcaaggaa atgtggaaca aaactgcctg
    38461 gcccctcgct tctggcgact gcgcgctctc cggcttgttt catccagtga caggcagatg
    38521 cgacattttc cagcatatcg cctggtaacg cacaacaggc agcaacaacc gccgataatg
    38581 cacagccagt tcctaccact ttagtcatta gcggatcgcc accgtgaatg ccaacgatac
    38641 gatgcccatc ggtaacataa tccacctcgc ctgtgaccac gacgattgcg ccagtttccc
    38701 gtgccagtgt ttgtgcagcg ggtattgcgt tagctgcggc gtcagtggta tccactcccc
    38761 gtccaccatt agcaacgcca gctaatgcca tgatttccga agcattacca cgtatggcgg
    38821 ttggcttatg agacagaagt tccagacaaa aacggcggcg ataatcgagt gcacccaccg
    38881 ctacaggatc aagcgtccag ggggtttgag agctttttgc ttgctcaacg gcggcacgca
    38941 tcgcctgtgc gcgtggctgc gtcagcgtgc caacgttaat cagcaacgca ctagcaatag
    39001 ccgcaaactg actggcctct tcggtttcga taaccatcgc tggcgatgca ccgagcgcca
    39061 gcaaggtatt ggcagtaaag gtttgcacca catcgttggt catgcagtgc acaagagggg
    39121 aatgttggtg aaaaaggtgt aacgtgtgcg cagattgcgc ggaactcagc aggtcgactt
    39181 gcatagtttg ctcctgccat aacgtgaaga agcaatgacc tggtggtccg tgacttccct
    39241 acgctggcat tatccagatc aggtaatacg ggtatttctc agccttcacg cagaagggca
    39301 ccccgagtcg tttggttgcg atgataaatc gcagaggagg atggtaatgt ccagcgcacg
    39361 cgttgtaaac gaggaaaaac ggcagtttta caatcgcgtt aataaattat ttgatatatg
    39421 aatccagcac cttcagaacg acatccagat cttcttcacg ttttagctca tccccctggt
    39481 gaacgatgtg ttccgtcaga tgacctttaa tcacttcccg catcagaccg tttaccgcgc
    39541 cacggatagc agcaatctgt tgtaaaactg cagcgcattc gtgcggctcg tcgagcattt
    39601 tcttgagcgc cacgacctgg ccctgaatct tactggcacg cgctttcagt ttctgtttat
    39661 cacggattgt atgagacatg gcaacacctg gttaacaaga atatgaaaaa tcatagcact
    39721 attaatctac tggggggtag tatcaggtac tgggggggag tagaatcaga ttgccgaatt
    39781 aatactaaga attattatca tgaccgaatt tacaactctt cttcagcaag gaaacgcctg
    39841 gttcttcatc cccagcgcca tcttacttgg tgcgcttcat ggtctggaac cagggcactc
    39901 aaaaacgatg atggcggcgt ttatcatcgc catcaaaggc accattaaac aggcggtgat
    39961 gctcggactg gcagcaacca tttcgcagac cgcggtggtc tggttgattg cctttggcgg
    40021 gatggtgatc agt
//
LOCUS       DADMHC010000011        39146 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.011, whole genome shotgun sequence.
ACCESSION   DADMHC010000011 DADMHC010000000
VERSION     DADMHC010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 39146)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39146)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39146
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.011"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            132..341
                     /locus_tag="JNZ57_000469"
     CDS             132..341
                     /locus_tag="JNZ57_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HAY8826804.1"
                     /translation="MTNTTLVKYGKLGYIVPRPQKIRGRWLIDRRAVFVGPGETGIAP
                     EIHTGDDDALKEILTHVTEATKKQH"
     gene            310..1428
                     /locus_tag="JNZ57_000470"
     CDS             310..1428
                     /locus_tag="JNZ57_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY8826805.1"
                     /translation="MSPRPQKNSTDVAGLYEKFDRRTGRVYYQYKNPVTGKFHGLGTD
                     KGKAEKIASTANQRIAAAEAEYFMRKIDESPSATKRRGIRLKAWVDRYLKIQDTRLKN
                     GDIAATTHKEKTRMAAYLVSRLGNHPLKELEVRDFALILDEWLDKDMVSTARVNRGLW
                     VDIYKEAQHAGEVPPGWNPPEATRKPIPKVTRARLTMEDWQKIYNATPEKHFIRNAML
                     LAIVTGQRRDDICHMRFSDVWNEHLHITQGKTGMRLALPLTLRCDAIGITLKEVIDGC
                     RDRILSPYLIHSRHQKQPKPMSKDNLSDYFAKARDLAGIIPPAGKTPPTFHEQRSLSE
                     RLYRAQGIDTKTLLGHKVQATTDRYNDTRGQEWVKLVI"
     gene            1595..2389
                     /gene="potC"
                     /locus_tag="JNZ57_000471"
     CDS             1595..2389
                     /gene="potC"
                     /locus_tag="JNZ57_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotC"
                     /protein_id="HAY8826806.1"
                     /translation="MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTT
                     KWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFV
                     VMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLE
                     AAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKI
                     YSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTKGNTGDVK"
     gene            2386..3432
                     /gene="potD"
                     /locus_tag="JNZ57_000472"
     CDS             2386..3432
                     /gene="potD"
                     /locus_tag="JNZ57_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein PotD"
                     /protein_id="HAY8826807.1"
                     /translation="MKKWSRHLLAAGALALGMSAAHADDNNTLYFYNWTEYVPPGLLE
                     QFTKETGIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKS
                     KLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGVNGDAVDPKSVTSWAYLWKPEYK
                     GSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPY
                     MEGEVNLGMIWNGSAFVARQAGTPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLIN
                     FLLRPDVAKQVAETIGYPTPNLAARKLLSPEVANDKTLYPDAETIKNGEWQNDVGAAS
                     SIYEEYYQKLKAGR"
     gene            complement(3588..4409)
                     /gene="cobB"
                     /locus_tag="JNZ57_000473"
     CDS             complement(3588..4409)
                     /gene="cobB"
                     /locus_tag="JNZ57_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent protein deacylase"
                     /protein_id="HAY8826808.1"
                     /translation="MLSRRDHRLSRFRKNKRRLRERLRQRIFFRDKVVPEAMEKPRVL
                     VLTGAGISAESGIRTFRAADGLWEEHRVEDVATPEGFDRDPELVQAFYNARRRQLQQP
                     KIQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAGNTNVIHMHGELLKVRCSQSGQ
                     VLDWTGDVTPEDKCHCCQFPAPLRPHVVWFGEMPLGMDEIYMALSMADIFIAIGTSGH
                     VYPAAGFVHEAKLHGAHTVELNLEPSQVGNEFAEKYYGPASQVVPEFVEKLLKGL"
     gene            complement(4425..5336)
                     /gene="nagK"
                     /locus_tag="JNZ57_000474"
                     /pseudo
     CDS             complement(4425..5336)
                     /gene="nagK"
                     /locus_tag="JNZ57_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415637.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine kinase"
     gene            complement(5365..6609)
                     /gene="lolE"
                     /locus_tag="JNZ57_000475"
     CDS             complement(5365..6609)
                     /gene="lolE"
                     /locus_tag="JNZ57_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolE"
                     /protein_id="HAY8826809.1"
                     /translation="MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVG
                     LSAMNGFERELNNRILAVLPHGEIEAVNQPWTNWQEALDKVQKVPGIAAAAPYINFTG
                     LVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKV
                     KQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG
                     SSVSGIALKMTDVFNANKLVRDAGEMTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAM
                     VLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCG
                     LIIGVVVSLQLTPIIERIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSL
                     LASWYPARRASNIDPARVLSGQ"
     gene            complement(6609..7310)
                     /gene="lolD"
                     /locus_tag="JNZ57_000476"
     CDS             complement(6609..7310)
                     /gene="lolD"
                     /locus_tag="JNZ57_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309522.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HAY8826810.1"
                     /translation="MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSS
                     GSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDF
                     TALENVAMPLLIGKKKPAEINSRALEMLKAVGLEHRANHRPSELSGGERQRVAIARAL
                     VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEM
                     RDGRLTAELSLMGAE"
     gene            complement(7303..8502)
                     /gene="lolC"
                     /locus_tag="JNZ57_000477"
     CDS             complement(7303..8502)
                     /gene="lolC"
                     /locus_tag="JNZ57_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004976588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolC"
                     /protein_id="HAY8826811.1"
                     /translation="MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTV
                     LSVMNGFERELQNNILGLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVV
                     LQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGD
                     QIRMMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGNEMLVNIEDASRLMRYPAGN
                     ITGWRLWLDEPLKVDSLSQQKLPEDSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVA
                     VAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMIFMVQGASAGIIGAILGAALGA
                     LLASQLNNLMPIIGVLLDGAALPMAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQP
                     AEALRYE"
     gene            8764..9837
                     /locus_tag="JNZ57_000478"
     CDS             8764..9837
                     /locus_tag="JNZ57_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HAY8826812.1"
                     /translation="MKQKELWINQIKGLCICPVVIYHSVITFYPHMTTFQHPLSEVLS
                     KCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWGNCLDKRIWNIFWVLALWGVVQW
                     LALSALNQWLAPERDLSNASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIF
                     SRLALPLFALFVLLSVAVNFVPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLR
                     RHLLMASLLTVLAVGAWLFTISLLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSN
                     TIAIYTTHRILVEIFSLTLLAQMNAARWSPQVELTLLLVYPFVSLFICTVAGLLVRKL
                     SQRAFSDLLFSPPSLPAAVSYSR"
     gene            9965..13411
                     /gene="mfd"
                     /locus_tag="JNZ57_000479"
     CDS             9965..13411
                     /gene="mfd"
                     /locus_tag="JNZ57_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HAY8826813.1"
                     /translation="MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVL
                     IAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQ
                     RGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRYVDQVMEHG
                     EYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFP
                     TDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYF
                     PANTLLVNTGDLETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNW
                     PRVQLKTKHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESE
                     GRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDKVRNLALICESDLL
                     GERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEY
                     LMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAA
                     ELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDR
                     LVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEM
                     ISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKE
                     RIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVV
                     REAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMND
                     FHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWL
                     LTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGF
                     SLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRI
                     ASAKTENELEEIKVELIDRFGLLPDPARTLLDVARLRQQAQKLGIRKLEGNEKGGVIE
                     FAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLKFLQDLSERKTRIEWVRQFMRELEENA
                     IA"
     gene            13555..14517
                     /gene="ldtC"
                     /locus_tag="JNZ57_000480"
     CDS             13555..14517
                     /gene="ldtC"
                     /locus_tag="JNZ57_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase LdtC"
                     /protein_id="HAY8826814.1"
                     /translation="MMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGEN
                     KFHVVENDGGSLEAIAKKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPRE
                     GIVINIAELRLYYYPTGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTAN
                     TRARYKAQGIELPAVVPAGPDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCI
                     RLRDDDIKTLFSQVTPGTKVNIINTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPI
                     TLNSAMQSFKDAAQTDAEVMQHVMDVRSGMPVDVRRHQVSPQTL"
     gene            complement(14600..14856)
                     /gene="bhsA"
                     /locus_tag="JNZ57_000481"
                     /pseudo
     CDS             complement(14600..14856)
                     /gene="bhsA"
                     /locus_tag="JNZ57_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309517.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multiple stress resistance protein BhsA"
     gene            15097..15729
                     /gene="comR"
                     /locus_tag="JNZ57_000482"
     CDS             15097..15729
                     /gene="comR"
                     /locus_tag="JNZ57_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family copper-responsive transcriptional
                     repressor ComR"
                     /protein_id="HAY8826815.1"
                     /translation="MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLAD
                     LVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFA
                     AIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGE
                     IPTHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK"
     gene            complement(15791..16330)
                     /locus_tag="JNZ57_000483"
     CDS             complement(15791..16330)
                     /locus_tag="JNZ57_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HAY8826816.1"
                     /translation="MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIK
                     ETVKTPRQECRNVTVTHRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGA
                     LGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRD
                     PGTQIPLDSNGQLILNNKV"
     gene            complement(16557..17861)
                     /locus_tag="JNZ57_000484"
     CDS             complement(16557..17861)
                     /locus_tag="JNZ57_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HAY8826817.1"
                     /translation="MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHS
                     HLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDE
                     KGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLK
                     YSANLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGE
                     RILPALPPRISAAAHSELTKLGVRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGI
                     KAPDFLKDIGGLETNRINQLVVEPTLQTTRDPDIYAIGDCASCTRPEGGFVPPRAQAA
                     HQMATCAMNNILAQINGKPLKNYQYKDHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRI
                     ARFVYISLYRMHQIALHGYFKTGLMMLVGSINRVIRPRLKLH"
     gene            complement(18261..18803)
                     /locus_tag="JNZ57_000485"
     CDS             complement(18261..18803)
                     /locus_tag="JNZ57_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HAY8826818.1"
                     /translation="MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQ
                     HLLKEVDKMLQLNVDERPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYENMEGKI
                     DRPEEYADIATKCVTNFREKNRDRCLVILSRNDEALNSQRTSEELHHYYEIVWDEEQT
                     HKFKNISPHLQRIKAFKTLG"
     gene            complement(18826..19851)
                     /gene="nagZ"
                     /locus_tag="JNZ57_000486"
     CDS             complement(18826..19851)
                     /gene="nagZ"
                     /locus_tag="JNZ57_000486"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HAY8826819.1"
                     /translation="MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRE
                     LVRQIRAASRNHLVVAVDQEGGRVQRFREGFTRLPAAQSFAALLGMEEGGKLAQEAGW
                     LMASEMIAMDIDISFAPVLDVGHISAAIGERSYHADPEKALAIASRFIDGMHEAGMKT
                     TGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSTLIRENKLDAIMPAHVIYSD
                     VDPRPASGSSYWLKTVLRQELCFDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMI
                     LVCNNRKGAVSVLDNLSPIKAERVTRLYHKGSFSRQELMDSARWKASSTRLNQLHERW
                     QEEKAGH"
     gene            complement(19862..20686)
                     /gene="thiK"
                     /locus_tag="JNZ57_000487"
     CDS             complement(19862..20686)
                     /gene="thiK"
                     /locus_tag="JNZ57_000487"
                     /EC_number="2.7.1.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine kinase"
                     /protein_id="HAY8826820.1"
                     /translation="MPFRSNNPITRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQ
                     RFVVRQPHDPDAPQSAFLRQYRALSQLPASIAPKPHLYLRDWMVVDYLPGAVKTYLPD
                     TNELAGLLYYLHQQPRFGWRIMLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRP
                     LRLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDTALELAAVWVENTEQHRQLVNDYA
                     TRAKIYPAQLWRQVRRWFPWLLMLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ"
     gene            complement(20670..21308)
                     /gene="lpoB"
                     /locus_tag="JNZ57_000488"
     CDS             complement(20670..21308)
                     /gene="lpoB"
                     /locus_tag="JNZ57_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HAY8826821.1"
                     /translation="MTKMSRYALITALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQ
                     PVPTVPSVPTIPQQPGPIEHEDRTAPPAPHIRHYDWNGAMQPMVSKMLGADGVTAGSV
                     LLVDSVNNRTNGSLNAAEATETLRNALANNGKFTLVSAQQLSMAKQQLGLSPQDSLGT
                     RSKAIGIARNVGAHYVLYSSASGNVNAPTLQMQLMLVQTGEIIWSGKGAVSQ"
     gene            complement(21322..21699)
                     /locus_tag="JNZ57_000489"
     CDS             complement(21322..21699)
                     /locus_tag="JNZ57_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HAY8826822.1"
                     /translation="MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGI
                     SAEKPVLSTSDIQPSASSTLYNERQKPVTVHYRFYWYDARGLEMHPLERPRSVTIPAH
                     SAVTLYGSANFLGAHKVRLYLYL"
     gene            complement(21702..22061)
                     /gene="hinT"
                     /locus_tag="JNZ57_000490"
     CDS             complement(21702..22061)
                     /gene="hinT"
                     /locus_tag="JNZ57_000490"
                     /EC_number="3.9.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415621.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine nucleoside phosphoramidase"
                     /protein_id="HAY8826823.1"
                     /translation="MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIP
                     NILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHM
                     HLLGGRPLGPMLAHKGL"
     gene            22395..24592
                     /gene="fhuE"
                     /locus_tag="JNZ57_000491"
                     /pseudo
     CDS             22395..24592
                     /gene="fhuE"
                     /locus_tag="JNZ57_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309507.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ferric-rhodotorulic acid/ferric-coprogen
                     receptor FhuE"
     gene            complement(24652..26085)
                     /gene="ptsG"
                     /locus_tag="JNZ57_000492"
     CDS             complement(24652..26085)
                     /gene="ptsG"
                     /locus_tag="JNZ57_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000475716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIBC"
                     /protein_id="HAY8826824.1"
                     /translation="MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVV
                     SHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLH
                     LPAEEIASKHLADTGVLGGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLA
                     AIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPF
                     QMQIGEYTNAAGQVFHGDIPRYMAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPEN
                     RAKVGGIMISAALTSFLTGITEPIEFFFMFVAPILYIIHAILAGLAFPICILLGMRDG
                     TSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVYYTIFRVLIKALDLKTPGREDATED
                     AKATGTSEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVV
                     AGSGVQAIFGTKSDNLKTEMDEYIRNH"
     gene            complement(26380..27177)
                     /locus_tag="JNZ57_000493"
     CDS             complement(26380..27177)
                     /locus_tag="JNZ57_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HAY8826825.1"
                     /translation="MFLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTL
                     TGYLHMRDLVGERDNVVFSCGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYT
                     PETKVRQQESFIHHIQIGRELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTED
                     RETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKE
                     NQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDASRLQSIR"
     gene            complement(27188..28192)
                     /gene="holB"
                     /locus_tag="JNZ57_000494"
     CDS             complement(27188..28192)
                     /gene="holB"
                     /locus_tag="JNZ57_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HAY8826826.1"
                     /translation="MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYAL
                     SRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGIDAVREVTEKLNE
                     HARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCR
                     LHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQ
                     ALAYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE
                     LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL
                     "
     gene            complement(28189..28830)
                     /locus_tag="JNZ57_000495"
     CDS             complement(28189..28830)
                     /locus_tag="JNZ57_000495"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HAY8826827.1"
                     /translation="MRSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGT
                     QLAEKLRSLVLDIKSVGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHD
                     LSTQAYQGGGRGIDQHMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIE
                     QESFDFFNRTRARYLELAAQDKSIHTIDATQPLEAVMDAIRTTVTHWVKELDA"
     gene            complement(28820..29842)
                     /gene="yceG"
                     /locus_tag="JNZ57_000496"
     CDS             complement(28820..29842)
                     /gene="yceG"
                     /locus_tag="JNZ57_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein YceG"
                     /protein_id="HAY8826828.1"
                     /translation="MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTL
                     KPGTGRLALGEQLYADKIINRPRVFQWLLRIEPDLSHFKAGTYRFTPQMTVREMLKLL
                     ESGKEAQFPLRLVEGMRLSDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGW
                     FWPDTWMYTANTTDVALLKRAHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKE
                     TAVASERDQVASVFINRLRIGMRLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTI
                     TGLPPGAIATPGADSLKAAAHPAKTPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVL
                     KEKNAQ"
     gene            complement(29845..30654)
                     /gene="pabC"
                     /locus_tag="JNZ57_000497"
     CDS             complement(29845..30654)
                     /gene="pabC"
                     /locus_tag="JNZ57_000497"
                     /EC_number="4.1.3.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate lyase"
                     /protein_id="HAY8826829.1"
                     /translation="MFLINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQ
                     RLQDACQRLMIFCDFWPQLEQEMKTLAAEQQNGVLKVVISRGSGGRGYSTLNSGPATR
                     ILSITVYPAHYDRLRNEGMTLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNAD
                     EALVLDSEGWVTECCAANLFWRKSNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVE
                     VQASLEEALQADEMVICNALMPVMPVRACGDVSFSSATLYEYLAPLCERPN"
     gene            complement(30774..32015)
                     /gene="fabF"
                     /locus_tag="JNZ57_000498"
     CDS             complement(30774..32015)
                     /gene="fabF"
                     /locus_tag="JNZ57_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HAY8826830.1"
                     /translation="MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTS
                     AYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIG
                     AAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISI
                     ATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQA
                     ASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPEN
                     GAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKAIFGEAASRVLVSS
                     TKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNLDEGCDLDFVPHEARQVSGME
                     YTLCNSFGFGGTNGSLIFKKI"
     gene            complement(32103..32339)
                     /gene="acpP"
                     /locus_tag="JNZ57_000499"
     CDS             complement(32103..32339)
                     /gene="acpP"
                     /locus_tag="JNZ57_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HAY8826831.1"
                     /translation="MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELV
                     MALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA"
     gene            complement(32550..33284)
                     /gene="fabG"
                     /locus_tag="JNZ57_000500"
     CDS             complement(32550..33284)
                     /gene="fabG"
                     /locus_tag="JNZ57_000500"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HAY8826832.1"
                     /translation="MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQA
                     ISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEE
                     WNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIG
                     FSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANA
                     VAFLASDEAAYITGETLHVNGGMYMV"
     gene            complement(33297..34226)
                     /gene="fabD"
                     /locus_tag="JNZ57_000501"
     CDS             complement(33297..34226)
                     /gene="fabD"
                     /locus_tag="JNZ57_000501"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HAY8826833.1"
                     /translation="MTQFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDL
                     WALTQQGPAEELNKTWQTQPALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCA
                     GVIDFADAVRLVEMRGKFMQEAVPEGTGAMAAIIGLDDASIAKACEEAAEGQVVSPVN
                     FNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAK
                     ITFNAPTVPVVNNVDVKCETNGDAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVG
                     PGKVLTGLTKRIVDTLTASALNEPSAMAAALEL"
     gene            complement(34242..35195)
                     /locus_tag="JNZ57_000502"
     CDS             complement(34242..35195)
                     /locus_tag="JNZ57_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HAY8826834.1"
                     /translation="MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHI
                     AAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG
                     CPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDG
                     AGAAVLAASEEPGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVT
                     ELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTS
                     AASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF"
     gene            complement(35263..36333)
                     /gene="plsX"
                     /locus_tag="JNZ57_000503"
     CDS             complement(35263..36333)
                     /gene="plsX"
                     /locus_tag="JNZ57_000503"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415608.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HAY8826835.1"
                     /translation="MTRLTLALDVMGGDFGPSVTVPAALQALNSNSQLTLLLVGNPDA
                     ITPLLAKADFEQRSRLQIIPAQSVIASDARPSQAIRASRGSSMRMTLELVKEGRAQAC
                     VSAGNTGALMGLAKLLLKPLEGIERPALVTVLPHQQKGKTVVLDLGANVDCDSTMLVQ
                     FAIMGSVLAEEVVEIPNPRVALLNIGEEEVKGLDSIRDASAVLKTIPSINYIGYLEAN
                     ELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFLSLLKSQGEGKKRSWWLLLLKRWLQKS
                     LTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQRAFAVAIEQAVQAVQRQVPQRIAA
                     RLESVYPAGFELLDGGKSGTLR"
     gene            complement(36414..36587)
                     /gene="rpmF"
                     /locus_tag="JNZ57_000504"
     CDS             complement(36414..36587)
                     /gene="rpmF"
                     /locus_tag="JNZ57_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HAY8826836.1"
                     /translation="MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHIT
                     ADGYYRGRKVIAK"
     gene            complement(36639..37160)
                     /gene="yceD"
                     /locus_tag="JNZ57_000505"
     CDS             complement(36639..37160)
                     /gene="yceD"
                     /locus_tag="JNZ57_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001174481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA accumulation protein YceD"
                     /protein_id="HAY8826837.1"
                     /translation="MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSD
                     VECSMSFAIDNQRLAVLNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEAL
                     PEAYEPIEVNEFGEIDLLAMVEDEIILALPVVPVHDSEHCEVSEADMVFGELPEEVQK
                     PNPFAVLASLKRK"
     gene            37359..37943
                     /gene="yceF"
                     /locus_tag="JNZ57_000506"
     CDS             37359..37943
                     /gene="yceF"
                     /locus_tag="JNZ57_000506"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415605.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-methyl-GTP pyrophosphatase"
                     /protein_id="HAY8826838.1"
                     /translation="MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQL
                     VLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTF
                     YTGLALFNSANGYLQTEVEPFDVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITL
                     FERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG"
     gene            complement(38055..39014)
                     /gene="rluC"
                     /locus_tag="JNZ57_000507"
     CDS             complement(38055..39014)
                     /gene="rluC"
                     /locus_tag="JNZ57_000507"
                     /EC_number="5.4.99.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(955/2504/2580) synthase
                     RluC"
                     /protein_id="HAY8826839.1"
                     /translation="MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRK
                     GEVRVNKKRIKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHI
                     LVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSAL
                     RSLHEQLREKGMQKDYLALVRSQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSET
                     RFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTG
                     LNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKLRNAR"
BASE COUNT         9746 a        10431 c         9597 g         9372 t
ORIGIN      
        1 gcggagcagg aaggacatct gatggaaatg gaaaccacgc aagcacctta aaatcaccat
       61 catacactaa atcagtaagt tggcagcatt acccgctcga cgagtggaaa ccaaaacggt
      121 tcagtctccc aataacaaac actaccctgg tgaaatacgg aaaactagga tacatcgttc
      181 caagaccaca aaaaattcgt gggcgttggc tgatagatcg ccgagcagta tttgttgggc
      241 ctggtgaaac gggaattgcg ccggaaattc atactggcga tgatgatgca ctgaaggaga
      301 ttttaactca tgtcaccgag gccacaaaaa aacagcactg acgtagccgg tctttacgaa
      361 aagtttgatc gcagaactgg cagagtttac taccagtata aaaatcctgt gactggaaaa
      421 tttcacggac tcggaacaga caaaggtaag gcagaaaaaa tcgcttccac agccaatcag
      481 cgaatagctg cagcagaagc tgaatatttc atgcgcaaaa ttgatgaaag tccgtcagca
      541 acaaaacgtc ggggtatcag attaaaggca tgggttgatc gatatctgaa aatacaggac
      601 acgcgactga aaaatggaga tattgcagct acaactcaca aagaaaaaac tcgaatggct
      661 gcatacctag tttcccgtct gggaaaccac ccattgaaag aactggaagt aagagacttt
      721 gcattaatac tggatgagtg gctggataaa gacatggtca gcacagcgag agtaaatcgt
      781 ggattatggg ttgatattta taaagaagca cagcatgcag gggaagttcc tcctggatgg
      841 aatcctccgg aggctacccg taaaccgatc cctaaagtaa ccagagccag gctcaccatg
      901 gaagactggc aaaaaattta caatgcaacg cctgaaaaac actttatccg taacgcaatg
      961 cttcttgcga ttgttactgg tcagcgccgt gatgacattt gccacatgcg tttttcagat
     1021 gtgtggaacg aacacttgca tatcacccag ggaaaaaccg gaatgcgtct ggcgttaccg
     1081 cttacactac gctgtgatgc cattgggata acgttaaaag aagttattga tgggtgccga
     1141 gacagaatat taagtccata tctaatccat agtcggcacc agaaacaacc gaagccgatg
     1201 agtaaagaca acctgagcga ctactttgcc aaagcacggg atctggctgg gataattcca
     1261 ccagcaggaa aaactccgcc aacatttcat gaacaacgct ctctatcaga acggctgtac
     1321 cgtgcacagg gtatcgatac aaaaacatta ctaggacata aagtccaggc aaccaccgat
     1381 cgctataacg atactcgagg tcaggaatgg gttaagctgg ttatttgaca aacaccatat
     1441 ggaatatccg tcaccatctc aggaaaaaag tgttgtaaaa tgcgtggcct agttttgggg
     1501 aaacgttttg gagagatttt ggagaaagga aaaaattgaa taaattcaaa atcctgaaag
     1561 tgctccacct tatgaataag aaggtggaac tcgaatgatc ggtcgactgc ttcgcggcgg
     1621 ttttatgacc gctatctacg cgtacctgta tatcccaatc attattttga ttgtgaactc
     1681 ctttaacagc tcgcgctttg gcatcaactg gcagggtttt accaccaaat ggtatagcct
     1741 gctgatgaac aacgacagcc tgttacaggc agcgcagcat tcactaacaa tggcggtgtt
     1801 ttcggcgacg tttgctacgc ttatcggttc actgacggca gttgcgctgt accgttatcg
     1861 ctttcgcggt aagccgttcg ttagcggaat gctgtttgtg gtaatgatgt caccagatat
     1921 cgtgatggca atttcgctgc tggtgctgtt tatgctgctg ggtattcagc ttggcttctg
     1981 gtcgctgctg ttctcgcata tcaccttctg cctgccattt gtggtggtga cggtgtattc
     2041 gcgcctgaaa ggttttgacg tgcggatgct ggaagcggcg aaagatctcg gtgccagcga
     2101 atttaccatt ctgcgaaaaa tcatactgcc actggcaatg ccagcggtgg cagcgggctg
     2161 ggtgttaagc tttaccctgt cgatggacga tgtggtagtt tcttcgttcg tcaccggacc
     2221 aagttatgaa attctgccgt taaaaattta ttcgatggtc aaagtcggcg tatcgccgga
     2281 agttaacgcg ctggcaacca tattactggt gctgtcgctg gtgatggtta ttgccagtca
     2341 gcttattgct cgtgataaaa cgaaaggtaa cacaggggac gttaaatgaa aaaatggtca
     2401 cgccacctgc tcgcggcggg tgctctggca ctgggcatga gcgccgctca cgccgatgac
     2461 aacaacacgc tgtatttcta caactggacc gagtacgtgc cgccaggact gcttgaacag
     2521 ttcaccaaag aaaccggtat taaggttatc tattcgactt acgagtcgaa cgaaaccatg
     2581 tacgccaagc tgaaaacgta caaagacggt gcgtatgacc tggtggttcc ttcaacctat
     2641 tacgtcgata aaatgcgtaa agaagggatg atccagaaga tcgacaagtc gaagttaacg
     2701 aacttcagca atctcgatcc agacatgctc aacaagcctt ttgacccgaa taacgactac
     2761 tccattccgt atatctgggg ggcgacggcg attggtgtta acggtgatgc ggtggatccg
     2821 aaatctgtca ccagctgggc ctatctgtgg aagccagagt acaaaggcag cctgctgttg
     2881 accgacgatg cccgtgaagt gttccagatg gcgctgcgta agctgggcta ttccggtaac
     2941 accaccgatc cgaaagagat tgaagctgca tataacgagc tgaaaaaact gatgccaaac
     3001 gtcgcagcgt ttaactccga taacccggct aacccgtaca tggaaggcga agttaacctc
     3061 ggcatgatct ggaacggttc tgctttcgtt gcacgccagg cgggtacgcc tattgacgtg
     3121 gtgtggccga aagaaggcgg catattctgg atggacagcc tggcgatccc ggcaaatgcc
     3181 aaaaacaaag aaggcgcgct gaaattgatc aacttcctgc tgcgcccgga tgtggcaaaa
     3241 caggttgctg aaactatcgg ttatccaacg ccaaaccttg cggcgcgtaa gctgttaagt
     3301 ccagaagtgg cgaacgataa aacgctctac ccggatgctg aaaccattaa aaatggcgaa
     3361 tggcagaatg acgttggcgc agccagcagc atttatgaag agtattatca gaagctgaaa
     3421 gcaggacgtt aattcagcaa gcgggcggtg gtattaccgc ccgtttttta tttagcaagg
     3481 atgtggctaa tgagtcagga cagtagagtt ttatcccact ctttcgtcgg tattgtggtc
     3541 cgctcgtagg cctgataagc gtagcgcatc aggcaatgct tcctgcttta taatcccttc
     3601 agcaactttt caacaaactc aggcaccacc tggcttgccg ggccgtaata tttctcggca
     3661 aattcattac cgacctgact tggttcgaga ttcagttcca cggtgtgcgc gccatgcagt
     3721 ttcgcttcgt gaacaaaccc agccgccgga taaacatgcc cggaagtacc aatggcaatg
     3781 aaaatatcag ccatcgacaa cgccatataa atttcatcca tgccgagtgg catttcgcca
     3841 aaccaaacga cgtgcgggcg caagggtgcc gggaactggc aacaatggca tttatcttct
     3901 ggcgtaacgt ctccggtcca gtcgagaacc tgaccacttt gcgaacaacg aactttcagc
     3961 aattccccat gcatatgaat gacattggta ttacctgcgc gttcatgcag gttgtctata
     4021 ttctgcgtta ccagcaaaaa gcgatcgccg agagcgtctt gcagtttagc cagcgcaaga
     4081 tgcgcggcgt taggctgaat ttttggctgc tgcagctgtc gacgacgggc gttataaaac
     4141 gcttgcacca gttcaggatc gcgatcgaaa ccttccggcg ttgccacatc ttcaacccga
     4201 tgttcttccc acaggccatc tgcggcgcga aaggtacgaa tacctgattc cgcagaaatt
     4261 cctgcccctg tcagtacgag tactcttggt ttttccattg cttccggcac cactttatct
     4321 ctgaaaaaaa tacgctgacg caaacgctcg cgcaggcggc gtttattttt acgaaaacga
     4381 cttaaccgat gatcccgacg cgacagcata gcaacctctg ttgtttaatc ggttagatgt
     4441 aggaaggccg caccacgcat tcctcccgca tcaccgtggc gcgcgcgttc aatgcgcgga
     4501 acacgagcta caggtaagag atgacgaggc agcctgtccg ccagttgcgt tgtgattgcc
     4561 gggaaattcg ataagccacc accaatgacg accaggtcag ggtcaacaat ggtcaggata
     4621 tttcccagac aaaccgctaa taaatccaga taacgctcaa cgtgcgccct tgcctgctca
     4681 tcgccttgat tataaagcgc aataatttcg ggagcctgca actgttgatg ataatagtgt
     4741 tgatacagcc acgcaaaacc gcgaccagac agataattct caatgcagcc atgctgacca
     4801 cagccgcagc ggcgtaacgg gaaatccaac cccatcatgg ttaacgcatc aaccggcaga
     4861 cgcatatggc caaactcgcc ggtaatgtag cttttaccgg taatcggttt gccgttgaaa
     4921 atcagcccac cgccaacgcc ggtaccaaga atcaacccca tcaccagtgg atattgcgta
     4981 aattcatcat ctcaggcttc tgaaagggca aaacagttgg catcgttatc aaggcgtaca
     5041 tcgcgatcaa gacgtgcgct caggtcggca cgcagcggtt taccgctggc agcggggaca
     5101 ttggcggcat acagcgtacc atcttctgtt tccggcattc ccggtatacc aatgccgaca
     5161 gaacctctac agccaaaacg ttgatcagct tcggctacca gctcgcacac tgcatctaaa
     5221 aatgcgtcat agctgtcacg cggtgtcggc acccgctttt cccactgcaa ctgccgaccg
     5281 ctatcaaaca cgccaagcgc aatttttgtt ccaccaatat caaacccgta atacattgcc
     5341 gctccttgtt ttaatgtact gcctttactg gccgctaagg actcgcgcag ggtcaatatt
     5401 actggcgcgc cgcgccggat accaacttgc caaaagactc agcaacaatg ctgtgaccag
     5461 tacgtagaag acgtccagcc agtgcaattc cgatggcagg aagtcaataa aatagatatc
     5521 gctggagagg aactgatgac cgatcagctt ttcaatccgc tcaataatcg gggtaagttg
     5581 cagtgaaaca actacgccga taatcagccc acacaggctg ccgaacagcc ctgccagcaa
     5641 tccataccag acaaagatgg cgcgaattaa accatctttc gcccccagcg ttcttaatac
     5701 tgcgatatcg ccactcttgt ctttcaccgc catcactaag gtggagacga tgttgaaaca
     5761 ggccacgcca atcaccagta ccatcgccag atacataatg gcgcggatca tctggatatc
     5821 gcgatacata tagccgtaag taccaatcca gcttttaata taaacatagc tgttggtcat
     5881 ttcacccgca tcgcgtacca gcttattggc gttgaaaaca tccgtcattt taagggcaat
     5941 acctgacacg ctggaaccca tatcaagata ttgttgggca tccgccagcg ggatcatggc
     6001 aaaactgtga tcgagttggc cactcaactg caaaataccc gcaacgtgca aacgcacacg
     6061 ttttggctgc atcagtttat gctcaggatt cgagttgggg atcatgatcg acacccaatc
     6121 gccctgcttc actttcagcg catccgccac gcctttgccg atgataattt gctgttcgcc
     6181 cgctttaaaa ttgcgccacg catccccctg aacaaacgag ggtaatgcgc tcagacgctg
     6241 ttcctgttgt gggttaacgc ccttcacctg gattgcgcgc agattcgctc cactttccac
     6301 cagcccggtg aaattgatat acggcgcagc ggcggcaata cccggcactt tctgcacttt
     6361 atccagtgct tcctgccagt tagtccatgg ctgatttacc gcttcgattt caccatgcgg
     6421 caacaccgcc agaatgcggt tattcagttc gcgttcaaag ccgttcatcg cgcttaagcc
     6481 gacgatcaat accgccacac cgagggcaat gccaatggta gaaatgacgg agatcagcga
     6541 caccatgcca ccgcgccgcc gtccgcgact aaaacgcagg ccaattaata acgataaagg
     6601 catcgccatt actccgcccc catcaggctc agttccgccg tcagacgtcc atcacgcatt
     6661 tctaactggc ggctcatacg tttcgccagt tgcaggtcgt gagtaaccac caggaaggcg
     6721 gtgccctgca agcgattcaa ttccccaagc aactggaaga tgctgtcggc gttacgcgca
     6781 tcgaggttac cggtaggctc atccgccagt accagacgcg gattattgac cagcgcacgg
     6841 gcaatcgcta cacgctggcg ttcgccgcca gaaagttcag atgggcggtg attcgcacga
     6901 tgctccagcc ccaccgcttt taacatctcc agtgcacggc tgttgatttc agcgggcttt
     6961 ttcttgccaa tcagcagcgg catagccacg ttttccaggg cggtaaaatc cggcagcagg
     7021 tggtgaaact gataaataaa gcccagtttc tggttgcgca gttctgcttt tgctgccgac
     7081 gacagtttgc tcatcggttg accgttaaag atcacatcgc cggaggttgg cgtatccagt
     7141 ccgcccagca ggtgcagcaa ggtgctttta ccggaaccag agctaccgac gatcgccatc
     7201 atttcacctt cgccgacgct gaaactgaca ttgtgcagta catcggtttg cacactgcct
     7261 tcctgatagc gtttgcacag gttgtcgcat tgcaacagga tcttattcat aacgtaaagc
     7321 ctcagcgggt tgtgtggcgg cagcgcgcca tgaagggtaa agcgtagaca gcagcgcgat
     7381 agccatcgcc accagcgcaa taacaatgac ctgtaaaggt tcgatagcca tcggcagcgc
     7441 cgcgccatca agcaggacgc cgattattgg catcagatta tttaactggc tggcaagcag
     7501 tgcgccaagc gccgctccga ggatcgcacc gataatcccg gcgctggccc cttgcaccat
     7561 aaagatcatc atgatttgtc gcggagttaa gccttgcgtt tgcaggatcg ctacttcgcc
     7621 ctgcttctcc atcaccatca gccccagcga ggtaataatg ttaaacgccg caacggcgac
     7681 aatcaggctc agcagtaaac ccatcatatt tttttccatg cgtacggcct ggaacaactc
     7741 gcctttacga tcacgccaat cctgccattt gctgtcttca ggcagttttt gctgacttaa
     7801 tgagtcgact ttcagcggct catccagcca caaacgccag ccggtaatat tgcctgccgg
     7861 ataacgcatc agacgcgagg catcctcaat attcaccagc atttcattgc catcgacttc
     7921 actgttggcg gcgaaagtgc caatcacatt gaacaggcgc tgacttggaa tacgccccat
     7981 cggcgtgaac tggctggcag atggtaccat catgcggatt tgatcaccgc gattaacgcc
     8041 tagctgtgag gcaagttgtt cgccgaggat gacattatat ttccccggct cgaggtcagt
     8101 ttgtttcaca ttgaccagat acggcgttag tggatctttt tgcgccggat cgatacccag
     8161 catcaccccg accgccacgc tgcgcgcgct ttgcagtacc acatcaccgg tagtaatagg
     8221 tgcgacgcga ttaacgccgt ccagtttgac tgccgtttcc gggagttgct gcgggttaag
     8281 agagccatgc tcagaagaga gaattgcctg tggcatcagg ccaaggatgt tgttttgcag
     8341 ctcgcgctca aagccgttca tcactgacaa tactgtgacc agcgccatca ccccgagggt
     8401 aatgccgatg gtagaaagcc aggagacgaa acgaccgaag cgatccgctg cacgcccacg
     8461 catgtaacgc aggccaataa ataaagcgac aggttggtac atgaaatccg tctggttgct
     8521 gtagcaaaga cacgagtata taagcgaaag caagatgggt aaacgtctga actgtaagtg
     8581 atcgtcaggg ctaatctgaa aagcccccgt aaatcaatcg gctaaattgc catgttttat
     8641 catcaatctt gccgcctgat cttaatctga aaaatcatcc aatacagaca gatacccatt
     8701 acacctcggg tcataacccg caggatcaac cgcatgtaaa ttaaaaaaga gcgtgttgtc
     8761 ctgatgaaac aaaaagagct atggattaac cagatcaaag ggttatgtat ttgtccggtg
     8821 gtgatttatc actcggtcat taccttttat ccgcatatga ccacttttca gcatccgtta
     8881 tcggaagtcc tgagcaaatg ctggatctat ttcaatcttt accttgcacc ctttcgtatg
     8941 ccggtttttt tctttatatc cggctatttg attcgccgct atatcgacag cgtaccgtgg
     9001 ggaaattgtc tcgataaacg gatctggaac atcttctggg tgctggcgct ttggggcgtg
     9061 gtgcagtggc tggcgttaag tgcgctgaac cagtggctgg cacctgagcg cgatttaagc
     9121 aatgcctcca atgccgctta tgccgattcc accggtgagt tcctgcacgg gatgatcacc
     9181 gccagcacca gcttgtggta tctgtatgcg ttaattgtct atttcgtggt atgtaaaatt
     9241 tttagccgtc tggcgctgcc actattcgcc ttgtttgtac tgctgagtgt ggcggttaat
     9301 ttcgttccca cgccgtggtg gggaatgaac agtgtgatcc gcaatttgcc ttattacagc
     9361 cttggcgcat ggtttggcgc aacaataatg acctgtgtta aagaggtacc gttgcgccgc
     9421 catctgctga tggcttcttt gcttaccgtt ctggcggtcg gtgcctggtt gtttactatc
     9481 tcgctgctgt tgtcgctggt atcgattgtg gtgatcatga agctgtttta tcagtacgag
     9541 caacgattcg gtatgcgctc caccagcctg ctgaatgtga ttggctccaa caccattgct
     9601 atctacacca cccatcgcat tctggttgaa atattcagct taactctgct tgcgcaaatg
     9661 aacgcagcac gctggtcgcc gcaagtcgaa ctgacactcc tgctggttta tccctttgtc
     9721 agtttgttca tctgtactgt tgcgggcttg ctggtaagaa aactttcaca gcgtgcattc
     9781 agcgatctgt tgttctcccc gccttcactg cccgctgccg tcagttactc ccgctaagcc
     9841 atcgccccag ccggggcgat tcaatttgct aaaccatgtc gattacggat aatgaacagc
     9901 attgcttatc agagatatgc ccccatatgt tgaggcatat cctaacgaga atctgacaac
     9961 cgttatgcct gaacaatatc gttatacgct gcccgtcaaa gcgggtgagc agcgtctgct
    10021 gggcgagtta accggcgcag cctgtgcaac gctggtagcg gaaattgccg aacgtcacgc
    10081 cggtccggtg gtactcattg caccagatat gcaaaatgct ctgcgtttgc atgatgaaat
    10141 cagtcagttc accgatcaga tggtgatgaa tctggcggac tgggaaactc ttccctacga
    10201 cagcttttcg cctcatcagg acattatctc ctcgcgcctt tccacccttt accagctacc
    10261 gacgatgcag cgtggcgtac tgattgttcc ggtgaatacg cttatgcagc gcgtttgccc
    10321 acacagtttt ctccacggtc atgcgctggt gatgaaaaaa ggtcagcgcc tgtcacgaga
    10381 tgcattacga acccaactgg acagcgccgg ttatcgctat gttgaccagg tgatggagca
    10441 cggcgaatac gccacgcgcg gcgcgttgct ggatctcttc ccgatgggga gtgagctgcc
    10501 ttatcgtctt gatttctttg atgatgaaat cgacagcctg cgggtgtttg acgtcgacag
    10561 ccagcgcacg ctggaggaag tagaagcgat caatctgctg cccgcgcacg aatttccgac
    10621 cgataaagcg gcaattgaac tgttccgcag ccagtggcgc gataccttcg aagtgaagcg
    10681 cgatccggaa catatttacc agcaagtgag taaaggcaca ttacctgccg ggatcgagta
    10741 ctggcagcca ttgttcttca gcgaaccact gccgccgctg ttcagttatt tccctgccaa
    10801 taccttgctc gtgaatactg gcgatctgga aaccagtgcc gaacgtttcc aggctgacac
    10861 gctggcgcgt tttgagaatc gcggcgtcga tccgatgcgc ccgctgttgc caccacaatc
    10921 gctctggctg cgggtggacg agctcttctc agagctgaaa aactggcccc gggtgcagct
    10981 aaaaactaaa catttaccga caaaagccgc gaatgccaat ttaggtttcc agaaactgcc
    11041 agacctggcc gttcaggcgc aacaaaaagc gccgctggat gcgctgcgta agttcctcga
    11101 gactttcgac ggtccggtgg tgttctcggt agaaagtgaa ggtcgccgtg aagcgctggg
    11161 tgaactgctc gcacgaatta aaattgctcc gcaacgcatt atgcgtcttg atgaagccag
    11221 cgaccgtggg cgttatctga tgattggcgc tgccgaacat ggttttgtcg ataaggtgcg
    11281 taatctggcg ctgatctgcg aaagcgatct gctcggtgaa cgtgttgccc gccgtcgtca
    11341 ggattctcgc cgcaccatca accccgatac actgatccgt aaccttgcgg agctgcatat
    11401 tggtcagccg gtggtccatc tggagcacgg tgtcgggcgc tatgccggaa tgaccacgct
    11461 cgaagcgggc ggcattactg gcgagtattt gatgctcacc tatgccaacg acgccaaact
    11521 gtatgttccg gtgtcgtcac tgcatctgat tagccgttac gcaggtggcg cggaagaaaa
    11581 cgccccgctg cataaacttg gcggcgatgc gtggtcacgc gcgcggcaga aagcggcgga
    11641 aaaagtgcgt gatgtggcgg cggaattgct ggatatctac gcgcaacgcg ccgccaaaga
    11701 gggcttcgcg tttaaacacg atcgtgagca gtatcagttg ttctgcgaca gcttcccgtt
    11761 tgaaaccacg ccggatcagg cgcaggccat taatgcggta cttagcgaca tgtgtcagcc
    11821 gctggcaatg gatcgtctgg tgtgcggcga tgttggcttt ggtaaaacag aagtggcgat
    11881 gcgcgccgct ttcctggcag tagataacca caagcaggtg gcggtgttgg tgcctaccac
    11941 ccttctcgcg cagcagcatt acgacaactt ccgcgaccgt ttcgccaact ggccggtacg
    12001 tatcgaaatg atctcccgtt tccgcagcgc caaagagcag acgcaaatcc ttgcggaagt
    12061 ggcggaaggg aaaatcgata ttctgatcgg tacgcacaaa ctgctgcaaa gtgacgtcaa
    12121 gtttaaagat ttaggcctgc tgattgtcga tgaagaacac cgcttcgggg tgcgtcataa
    12181 agagcgcatt aaagcgatgc gcgcgaacgt ggatattctg acgcttactg caacgccgat
    12241 cccacgcacg ctgaatatgg caatgagcgg aatgcgtgac ctgtcgatta tcgccacgcc
    12301 gcccgcccgt cgtctggcag ttaaaacctt tgtccgtgag tatgacagcc tggtggtccg
    12361 ggaggcgatc ctgcgtgaaa ttttgcgcgg ggggcaggtt tattatctct acaatgatgt
    12421 ggaaaacatc cagaaagctg ccgaacggct ggcagaactg gtgccagaag cgcggatcgc
    12481 catcggtcac gggcagatgc gcgagcgcga actggaacgg gtgatgaatg atttccatca
    12541 tcaacgtttc aacgtgctgg tttgtacaac cattatcgaa accgggatcg acatcccgac
    12601 agccaacacc attatcattg aacgcgcgga tcacttcggt ctggcgcagc tgcaccagtt
    12661 acgcggtcgc gtcggacgtt cacatcatca ggcatatgca tggctgctga cgccgcatcc
    12721 aaaagcgatg actaccgatg cacaaaaacg tcttgaagcg attgcctcgc tggaagatct
    12781 cggtgcaggc tttgcgctgg caacgcacga tctggagatc cgcggcgcgg gtgaactgct
    12841 tggcgaagaa caaagtggct caatggaaac catcggtttc tcgctgtata tggagttgct
    12901 ggaaaacgcc gtcgatgcac tgaaagccgg acgcgagccg tcgctggaag atctcaccag
    12961 ccagcaaaca gaagtcgagc tgcggatgcc gtcgctattg ccagatgatt tcattcctga
    13021 cgtgaatacg cgtttgtcgt tctataaacg tattgccagc gccaaaacgg aaaacgaact
    13081 ggaagagatc aaagtcgagc ttatcgatcg cttcggcctg ctgccggatc cggcgcgtac
    13141 cctgctggat gttgcccgtc tgcgccagca agcgcagaaa ctggggatca ggaagctgga
    13201 aggtaatgag aaaggcgggg tgatcgaatt tgccgagaag aatcacgtta atccggcctg
    13261 gttgattggt ttgctgcaaa aacagccgca gcattaccgc cttgatggtc cgacgcgcct
    13321 gaaatttctt caggatttga gtgagcggaa aacgcgtatc gaatgggtac gccagtttat
    13381 gcgtgaactg gaagagaacg cgatcgctta atggtaaatc gggggcgttt ctgcgccccc
    13441 atcggcaaca tttacaaatt ctttgcactt ccctgcacta tccgacactg tcaccatcca
    13501 taattcaggc ttatctgttt attacaataa ccttatattt attatggatt tttggtgatg
    13561 atcaaaacgc gtttttctcg ctggctaacg ttttttacgt tcgccgctgc cgtggcgctg
    13621 gcgctaccgg caaaagccaa cacctggccg ctgccgccag cgggcagtcg tctggttggc
    13681 gaaaacaaat ttcatgtggt ggaaaatgac ggtggttctc tggaagccat cgccaaaaaa
    13741 tataacgtcg gctttctcgc tctgttacag gctaaccccg gcgttgatcc ttacgtaccg
    13801 cgcgcgggca gcgtgttaac gatcccgttg caaaccctac ttccagacgc gccgcgcgaa
    13861 ggcattgtga tcaacattgc ggagctgcgt ctctattact acccgacggg taaaaattcg
    13921 gtaaccgtgt atccaatagg tattggtcag ttaggtggtg acacgctgac accgacaatg
    13981 gtgaccaccg tttcagacaa acgtgcaaac ccaacctgga cgccaacggc aaacacccgc
    14041 gcccgttata aagcacaggg aattgagttg cctgcggtag tgccggctgg accggataac
    14101 ccaatgggcc atcatgcgat tcgtctggcg gcctatggcg gcgtttattt gcttcatggt
    14161 acgaacgccg atttcggcat tggcatgcgg gtaagttctg gctgtattcg tctgcgggat
    14221 gacgatatca aaacactctt tagccaggtc accccaggca ccaaagtgaa tatcatcaac
    14281 actccgataa aagtctctgc cgaaccaaac ggtgcgcgtc tggttgaagt acatcagccg
    14341 ctgtcagaga agattgatga cgatccgcag ctgctgccaa ttacgctgaa tagcgcaatg
    14401 caatcattta aagatgcagc acaaactgac gctgaagtga tgcaacatgt gatggatgtc
    14461 cgttccggga tgccggtgga tgtccgccgt catcaagtga gcccacaaac tctgtaaatc
    14521 ctggataaaa aaaatccccg cgacacggca tgtcgcgggg aaaaaatcag cagtagcagg
    14581 cattaatgag ggttaatgct tatttataaa ttactgcttt ccatggaggg tattcggacc
    14641 ggttacagaa gtaatacgga aagattttgc gcccatctca tccgcttttt gcgccagctg
    14701 ctcttccagc gatcccagat ttgtccccgc tttagcactg attgtaccga ctttttgttg
    14761 gccttctggc gttgactgaa cttcgacagc cgcaaagctg gcaaatgaca tggagcttaa
    14821 aatcgccgca gcgatgaggg tttttacgtt tttcataata gtggccttat gcagatgaat
    14881 gacgtcgcaa gcaattattt aacgatcgat aactaaatga cagatgtgat ctggatcaca
    14941 tacaagatat tttttataac aatcattaat taatttaaaa atctttaaat ttcagttaaa
    15001 tagaaagcaa ttatttttat gggatctgga ctggtgaacg gaggtgatta tttttataat
    15061 aacctttcat tcacagtcac caggtacaac ggcatcatgg caactgactc aacacaatgt
    15121 gtaaaaaaaa gccgtggccg cccaaaagta ttcgacaggg atgccgcgct tgataaggcc
    15181 atgaaattgt tctggcaaca cggttatgaa gcgacttctc ttgcggacct cgtcgaagcg
    15241 accggagcca aagcgcccac gctatacgcg gaatttacca acaaagaggg gttatttcgt
    15301 gccgttctcg accgctatat cgatcgtttt gccgctaagc atgaagcaca gctgttttgt
    15361 gaagagaaaa gcgtggagtc tgcgctggct gactattttg ctgccatcgc caactgcttt
    15421 accagcaaag acaccccggc aggctgcttc atgatcaaca actgcaccac cctctcccca
    15481 gattcaggag atatcgccaa tacgttgaaa tcacgccatg cgatgcaaga gcgcactttg
    15541 cagcagtttt tatgtcaacg acaagcgcgc ggggaaatcc cgacccactg tgacgtgaca
    15601 catctggcag aattccttaa ttgtattatt caggggatgt cgatcagcgc acgcgaaggt
    15661 gcatcgctgg aaaaactaat gcagattgcc ggaacgactt tgcgtttatg gcccgaactg
    15721 gtgaaataag tcgcaaaaaa agcccctcag cctgagcgaa tgaggggcca aattgcagag
    15781 tacagccttg ttatactttg ttattcaaaa tcagttgccc attactatct agcgggatct
    15841 gcgtacccgg atcgcggtcc atgcggattt tgccctgctg atcgccaatc ttataggtca
    15901 catcataacc gagcattttt tctgacttgt catacaccgt tttacaacgc tgttgcgtag
    15961 tcgtgtaagt atcgctttcc tggagagagc cctggatctg gttaccggca tatccaccac
    16021 ccagcgcccc cacaacagtg gcgacatctt taccgcgacc accgccaaac tgatgcccta
    16081 tcacgccgcc agcaacagcg ccgagcaccg acccggtaat gcgattttca tcctgcaccg
    16141 gtcgacgatg ggtcactgtg acgttgcgac actcctgacg cggtgtttta accgtttcct
    16201 tgattggggt tgcagaaaca acctgagcgt attgcgggcc acgttcaaac acgttcagac
    16261 tggccactgc cgctacgccc agcgcagctg cgacaccaat cccgataccc gccaacattg
    16321 atttattcac gggaacacct ccttctttgc agttatgcca atcatgcaag cgaaggagaa
    16381 aagcagctat cagacagaag atgaaaagcg cgggaatggc tggaaatact taatgattcg
    16441 gaggagtctg aaggaatgcc tgatgcgacg cttaacgcgt cttatcaggc ctaccgctcg
    16501 taccatttgt ctagggcgga tgaggcgttt atgccacatc cgccagtgta cgtcgattaa
    16561 tgcaacttca aacgcggacg gataacgcgg ttaatactcc ccaccagcat cattaatccg
    16621 gttttaaagt aaccatgcag cgcaatctga tgcattcggt atagcgagat atatacaaag
    16681 cgcgcaattc gtccttcaat catcattgag ccgcgcgtca agttacccat caggctacca
    16741 acggtggaga agttcgacag cgataccagt gaaccatgat ctttatactg ataatttttc
    16801 agcggcttac cgtttatctg cgccagaata ttgttcattg cgcaagtcgc catctggtgt
    16861 gcagcctgag cacgcggcgg aacaaagccc ccttccggac gcgtgcatga cgcgcagtcg
    16921 ccaatagcgt aaatgtctgg atcgcgggtg gtttgcagcg tcggttccac caccagctgg
    16981 ttgatacggt tagtttcaag accaccgata tctttcagga agtctggcgc tttgatcccg
    17041 gctgcccaca ccatcagatc agcctcaata tattcaccat ctttagtgtg caggccgcct
    17101 tcatcagcac tggtgaccat ggtttgcgtc agcacgcgaa cgccaagttt cgttaactca
    17161 ctatgggccg cagcagagat gcgtggcggt aatgcaggca aaatacgttc tcccgcttct
    17221 actagcgtta cgttcagggc ttcgttggtc agacctttat aaccgtagct gtgcagttgc
    17281 ttgaccgcgt tatgcaactc agcggagagt tctacacccg tcgcgccgcc accgacaatc
    17341 gcaatgttca ctttgccatt cgcgcccagg ttggcggagt atttcaggaa cagattcagc
    17401 atctcctggt ggaagcgacg cgcctggtgc gggttatcga ggaaaatgca gttctctttg
    17461 acgcctggcg tattgaaatc gttagaggtg ctacccagcg ccatgaccag ggtgtcatag
    17521 gcgattttac gttccggaac cagcagttca cctttctcgt cgcgtagttc tgcaatagtg
    17581 attgttttcg cttcacgatc aatatcaatg acggaaccca actggaactg gaaaccatga
    17641 ttgcgcgcat gggccagata gctcaacgca tcgacgcctt catcaagcga gccagtcgcc
    17701 acttcgtgca gcagcggttt ccacaggtgg ctgtggttac gatcgaccag cgtaattttg
    17761 gcttttttct tacgtcccag cttatgcccc agctgtgttg ccatttccag cccaccagca
    17821 ccgccgccga caatcacaat ctttttcaat ggcgtagtca acgtgacccc cttaaattta
    17881 ttaaccaatt gttaattaat ggttattaac atagctctta attaacaaca ggttacagca
    17941 atgaaaatgt tcttcgctat tgagaataac atgaatggtg cattggtcat accaaaattg
    18001 atgttaatca agttttgttg ctgaaaagat aggcgacttt accgggtaag atcaaaaaat
    18061 agagtttatt gtttattatt tgagcgaatt tgtgagagtg atatagagtg aggggtgtat
    18121 gcagggcgtt cggtaggcct gataagaggc gcatcaggca ttggtgctcg actgtcggat
    18181 gcggcgtaaa cgccttatcc gacttacaga attcggagcg catcaggtac cggcaaggtt
    18241 acctgatgcg acgagggcat ttacccgagg gttttgaacg ctttaatgcg ctgcaaatgc
    18301 ggggagatat tcttgaattt gtgcgtctgc tcttcgtccc agacaatctc gtaataatga
    18361 tgcaactctt cagatgtccg ctggctgtta agcgcttcat cattacgcga caaaatcacc
    18421 aggcaacgat cgcgattctt ctcgcggaag ttggtcacac acttagtggc aatatcggca
    18481 tactcttccg ggcgatcaat cttgccttcc atgttctcat aagggaacaa attagggttg
    18541 aagatcacct ggcggatatc gcaaagaaaa ccaatccgtt ccgcccagta tccgcccaga
    18601 ccaacgccgc aaatcagcgg acgctcgtcg acgttcagtt gcaacatttt gtccacttct
    18661 ttaagcagat gctgcatatc atgtttcgga tgccgcgtac tgtagcttat caagcgtaca
    18721 tccgggtcaa taaactgcaa ttgtaagact ttctcgtggt tacccggact gttagagtca
    18781 aaaccgtgta aatagataat catcgcttcc tcacataagc cagggttagt gacctgcttt
    18841 ctcttcctgc cagcgttcat gtaactgatt cagacgggtg ctgctcgcct tccagcgagc
    18901 cgagtccatc agttcctgtc gcgaaaatga acctttatga tacaaacgtg taacacgttc
    18961 tgccttgatc ggtgacagat tatctaacac gctgacggcc cctttacgat tattgcagac
    19021 caggatcata tcgcaacctg cgtccagtga tgcctgcccg cgttcggcat aactgcccat
    19081 aatcgcggca ccttccatcg ataaatcgtc agagaaaatt acaccgtcaa aacacagttc
    19141 ctgacgcaaa acggttttca gccagtagga agaaccgctc gccggacgcg gatcaacatc
    19201 actgtagatc acatgcgcag gcataatggc gtcgagttta ttttcgcgga ttaacgtgct
    19261 gaaaaccgac atatctttgg cacgaatttc cgcttgcggg cgtgggtcgc acggcgtctc
    19321 tttgtgtgaa tctgcagtta ctgcaccgtg tcctgggaag tgtttcccgg tcgttttcat
    19381 tccggcttca tgcatcccat caataaaccg actggcgatt gccagggctt tttctgggtc
    19441 ggcatgataa gaacgctcgc caatcgccgc gctgatatgt cctacatcca gcactggcgc
    19501 aaagctgata tcaatatcca tagcgatcat ttcgctggcc atcagccaac ccgcctcttg
    19561 cgccagtttg ccgccctctt ccattcccaa cagcgcagca aaggattgtg ctgccggtaa
    19621 gcgggtaaaa ccttcgcgaa aacgctgcac gcgtccacct tcctgatcta ccgccaccac
    19681 cagatgattg cgcgatgctg cgcggatctg gcgcaccagt tcacgtaact gggcaggatc
    19741 atgatagtta cgcgtaaaga gaatcagccc tcccaccagc ggatgcgcca gtatttcacg
    19801 ctcttccgcg tccagttcgt aaccttcgac atccaacatt actggaccca cactgctctc
    19861 cttattgttt tattaatagc tgccgccagg tgtcatcggc cagcctgata aattgttgat
    19921 cgccggtttg tcgccagcgg tactcaaacc accctgcttt gagcatcagc agccagggaa
    19981 accatcgcct gacctgacgc cataattgcg ccggataaat cttcgcgcga gtggcatagt
    20041 cattgaccaa ttgccggtgc tgttcagtat tttccaccca caccgccgcc agttccagcg
    20101 cggtatcacc atctccggca tactcccagt cgatgagttt taaccctgat gcgctatgca
    20161 ctaaatttcc ggcgtggaca tccatatgca atggacttaa gcgtaaaggt cgtggttccc
    20221 gcgctttgcg cagacgtttt aacattcgca gccaacccac agtccgccgc gccggatcgc
    20281 tttgctgcca gtacagttcc agtaacggca acagcattat tcgccagcca aaacgtggtt
    20341 gttgatgtag ataatacagc aagcctgcca gttcgttggt atccggcaaa tacgttttta
    20401 ccgcgccggg cagatagtcg actaccatcc agtcacggag atataaatgc ggcttcggtg
    20461 caatgcttgc gggtagttgt gataaagccc gatactggcg caagaacgcg gactgcggcg
    20521 catcaggatc gtgcggctga cgcacaacaa aacgctggcc ctgatgttca atgagaaaac
    20581 taccgccact aagcccacta ttaaacgtcg tgacgggatg aaactgcggg aaaaagcgcg
    20641 acagcaattc gtcgcgcgtg atgggattat tactgcgaaa cggcaccttt acctgaccag
    20701 ataatttcgc ccgtctgcac cagcatcagc tgcatttgta gggtcggagc gttaacgttg
    20761 ccagaggcgc tggagtacag cacgtaatga gcgccgacat tgcgggcaat gcctatggct
    20821 ttactacggg tgcctaaact gtcctgcggc gacaaaccta actgttgctt agccatcgac
    20881 agttgctggg cggaaaccag ggtaaatttc ccgttattag ccagcgcatt tcgcagcgtt
    20941 tcggtcgctt ctgcggcatt cagcgaaccg ttagtacggt tgttaacgct atcaaccagc
    21001 aggacgctac ccgcagtcac cccgtcagcc ccaagcatct tactgaccat cggctgcatt
    21061 gcgccattcc agtcataatg gcgaatatgc ggcgcaggcg gtgccgttcg atcttcgtgc
    21121 tcaattgggc ctggctgctg cgggatcgtc ggcaccgagg gcactgtggg gacaggctgt
    21181 tgtggctcgg ctggttgttc cggcgctggt ttcacttctt ctaccggtgc aggttcacgt
    21241 tgccccacac acccggcgag aaacatcgcc agcgcggtaa tcaaggcgta gcgactcatt
    21301 tttgtcatca agattcaccc cttacaaata tagataaagt ctgactttgt gcgcccccag
    21361 aaaattggcg ctgccgtaca gcgttaccgc cgaatgtgcg ggaatggtaa cgctgcgtgg
    21421 cctttccaga ggatgcatct ccagccctct ggcgtcatac cagtaaaaac gataatgaac
    21481 ggtaacgggt ttttgccttt cgttataaag cgttgaggat gctgaaggtt gaatatcaga
    21541 cgtcgaaagg acgggctttt ctgcactgat gcccgcagcc aataaagatg actccatcac
    21601 cagcgattgc tcatcattca ccggaatttc cggatgtgaa cgacagccca ccagcagtaa
    21661 caacaccaga gacaccagcc caaagcatcc ttttctcatc gttacagacc tttatgcgcc
    21721 agcattggtc ccagcggacg gccacccaac aagtgcatat ggatgtggta aacctcttgt
    21781 ccgccatggc ggttggtatt catgatcaga cgatagccat cttcggcaat accttcttgc
    21841 tcagcaattt ttgccgctac ggtgatcatg cgtcccagcg cctgctcatg ctcagctgag
    21901 acgtcgttca cagtcggaat gaggatattc ggaatgatca gaatatgcgt tggcgcttgc
    21961 ggcgaaatat cgcgaaacgc cgttaccaga tcatcctggt agacgatatc ggaggggatc
    22021 tcacgacgaa taattttgct gaatatagtt tcttctgcca cgacattttc ctttttcaaa
    22081 tagccatgcg ttgcgccatg ctacgccgcg ccacactgcg agtatagagt atggtcgagt
    22141 taaacctgct ctttcaacct taactcacga tttcttaagc aaaaaatcgt tttgctgccg
    22201 tatatatcgc cattattccc atttctgcct gcgaatgcgc tgaaaagaca ttctctgttt
    22261 ggtttacacg acaaatatga atgcgtatat ttctcatttg catttacaaa caaaattatt
    22321 cgcacactaa atataatcgc tcatcaccct cctccggcat gagcctgacg acaacataaa
    22381 ccatgagatt tcaaatgctt tcaacacaat ttaacaggga taatcaatat caagccatca
    22441 ccaaaccgtc actacttgcc ggttgcatag cactggcact attaccttct gccgcttttg
    22501 ctgcaccagc cactgaagaa acggtgattg ttgagggttc agccacagct ccagatgatg
    22561 gcgaaaatga ttacagcgta acgtctacct ctgcgggtac caaaatgcag atgactcaac
    22621 gtgatattcc tcagtcggtc actattatta gccagcagcg gatggaagat cagcagttac
    22681 aaacgctggg cgaagtgatg gaaaacacgc tggggatcag caaaagtcag gcggattccg
    22741 atcgtgctct ttattattcc cgcggattcc agatcgataa ctatatggtt gatggtatcc
    22801 ccacctattt tgaatcgcgc tggaatctgg gcgatgcact ttctgatatg gcactgtttg
    22861 aacgcgtaga agtagtgcgt ggcgcgacag gactcatgac cgggacgggt aatccatctg
    22921 cggcaattga tatggttcga aaacacgcga ccagtcgtga atttaaaggc gatgtctcgg
    22981 cggaatacgg tagctggaac aaagaacggt atgtggcgga tttacaaagc ccactcaccg
    23041 aagacggtaa aatccgcgcg cgaattgtcg gcggctacca gaataacgac tcatggctgg
    23101 accgctacaa cagtgaaaag accttcttct ccggcattgt cgatgctgat ttaggcgatc
    23161 ttacgacgct ttcagccggt tacgaatatc agcgcattga tgttaatagc cctacctggg
    23221 gcggtttacc gcgctggaat actgatggca gcagcaacag ttacgatcgt gcacgcagta
    23281 ccgcacctga ctgggcgtac aacgataaag agatcaacaa ggtctttatg accctgaagc
    23341 agcggtttgc tgatacctgg caagcgacac tgaatgccac ccactctgaa gtcgaatttg
    23401 acagcaaaat gatgtatgtc gatgcctatg taaacaaagc ggatggtatg ctggttgggc
    23461 catacagtaa ttatggacct ggctttgatt atgtcggcgg caccggttgg aacagtggca
    23521 aacgtaaagt tgatgcgctg gatttgttcg ctgacggtag ttatgaattg tttggtcgtc
    23581 agcacaatct aatgtttggt ggcagttaca gcaaacaaaa caatcgttac ttcagttcat
    23641 gggccaacat cttcccggat gaaattggca gtttctacaa ctttaatggc aatttcccac
    23701 aaaccgactg gtcaccacag agcctggcac aggacgatac cacacatatg aaatcgttat
    23761 atgctgccac tcgagtcacc cttgccgatc cgctgcatca gatcctcggc gcacgttata
    23821 ccaactggcg ggttgatacg ctgacttaca gcatggagaa aaaccacacc acgccttacg
    23881 ctggtctggt gtttgacatc aatgacaact ggtcgaccta cgccagctat acctctattt
    23941 tccagccgca aaatgatcgt gacagttcag gcaaatatct ggctccaatc accggtaaca
    24001 actacgagct gggtctgaaa tcggactgga tgaatagccg tctgaccacc acgttagcca
    24061 tcttccgtat tgagcaggat aatgtcgctc agtccaccgg tacacctatc cccggcagca
    24121 acggcgaaac cgcctataaa gcggtggatg ggacagtcag taaaggggtg gaatttgaac
    24181 tcaacggcgc aattaccgac aactggcagc tgacatttgg cgcaacgcgc tatattgcag
    24241 aggataacga aggaaacgcc gttaatccta atctgccacg caccacggtt aaaatgttca
    24301 ccagctatcg gttgcctgtc atgccagagt tgacagtcgg cggtggtgtt aactggcaaa
    24361 atcgcgtgta taccgacacc gtgacaccgt gacaccgtat ggcaccttcc gcgccgagca
    24421 aggtagctac gcgctggtgg atctcttcac ccgctaccag gtgacgaaaa acttctcgtt
    24481 acaggggaac gtcaataacc tgttcgacaa aacctacgat accaacatgg aaggttctat
    24541 cgtctacggc gcaccgcgta atttcagcat taccggcacg tatcaattct gaataacacc
    24601 tgtaaaaaag gcagccatct ggcagcctta gtctccccaa cgtcttacgg attagtggtt
    24661 acggatgtac tcatccatct cggttttcag gttatcggat ttagtaccga aaatcgcctg
    24721 aacaccagaa cccgcaacca ctacgcccgc tgcgcccagt ttcttcaggc cagcctgatc
    24781 cactttagac acatcagcaa cgctgacgcg cagacgggta atacatgcgt cgaggttagt
    24841 aatgttttct ttaccaccaa atgcagcaac cagagccggt gccatttcgc tggtacctgt
    24901 tgcttttgca tcttcagtcg cgtcttcacg acccggcgtt ttcagatcca gtgctttaat
    24961 cagcacgcgg aagatggtgt agtaaacaat cgcataaccg ataccgacga tcgggaacag
    25021 ccacagtttg ctgctgttac cagacagaac gataaagtcg atcagaccgt gcgagaacga
    25081 cgtaccgtca cgcatcccca gaagaataca gattgggaat gccaggcctg ccagaatcgc
    25141 gtggatgatg tacaggatcg gcgcaacgaa catgaagaag aactcgatcg gctcggtgat
    25201 accggtcagg aacgaggtca gcgccgcgga gatcataata ccgcccactt tcgcgcggtt
    25261 ttctggttta gcagagtgcc agatagcaat tgcggcagct ggcagaccgt acattttgaa
    25321 caggaagcca ccagacagtt tacccgcagt cgggtcaccc gccatataac gcggaatgtc
    25381 gccgtggaaa acctgacctg ctgcgttggt gtattcacca atctgcatct ggaaaggtac
    25441 gttccagatg tggtgcagac caaacggtac caggcaacgt tcgatgaaac cgtaaatgcc
    25501 aaacgcaact accgggttct ggtaagcagc ccactgagag aaggtctgga ttgcagaacc
    25561 aatcggcggc caaatgaagg acagcacaac gccagtaaag atggcagcca ggccagaaat
    25621 gatcggcaca aagcgtttac cggcaaagaa gccaagatac tcaggcagct taatacggta
    25681 gaaacggtta aacatgtacg ctgcgatcgc accggagata atccctccga gtacgccagt
    25741 atccgccagg tgtttagagg cgatttcttc agcaggtaaa tgcagtacca gtggcgcaac
    25801 cacggccatg gttttaacca tgatgccata ggcaacaact gcggccagcg cggatacgcc
    25861 atcgttattg gtaaagccga gggcgacacc gatcgcaaaa atcagtggca tgtttgcaaa
    25921 gacggaaccg cctgcttctg ccataacatg cgatacaacg gcgggcagcc agctgaaatt
    25981 cgcggaaccg acgcccagca gaatacctgc gataggtagt acggataccg gcagcatcag
    26041 cgatttaccg accttttgca ggttagcaaa tgcattctta aacataattg agagtgctcc
    26101 tgagtatggg tgcttttttt acgttctcac gcgtggcaag gggggagagc ctcgccgtgt
    26161 acagggcatc taagcgccct ttatttatta cacagagtaa aataattcag tgccaatttg
    26221 tttgacggct atcacgtttc aacttcagat cattggagaa gttgcacatt ttgacaaaac
    26281 atatgtcaca atatttcaaa cgcggttatt caccgcccaa ttttcggcgg tgaactttac
    26341 tcgttttagc cattaattac gagctttaaa aaaactcatt caacggatgg attgaaggcg
    26401 ggaagcgtcg atgtgaaaca gacgggcgaa gttatcggtg gttacctgcg ccagttcttc
    26461 aacggcaaca cctttcaaca cagccatgta ttctgcaacg tcacgaacca tcgcaggttg
    26521 attctctttt cctcgatgcg gtaccggcgc aaggtaaggt gagtcagttt ccaccagtaa
    26581 tcgatccagg gggacataac gcgcagcatc gcgcagttgc tccgcattac ggaaggtcac
    26641 aatgccggaa aaggagatgt aaaatccgag atccagtaat ttacccgccg tttctctgtc
    26701 ctctgtaaaa cagtgtagta cgccaccgca atccgtcact ttttcttcgc gcagaattgc
    26761 cagcgtatcg gcacgggcgt cacgggtatg gacgataacc ggcttgttca gttcacgacc
    26821 aatctggata tgatggatga aggactcttg ctgacgtact ttagtttccg gtgtgtaata
    26881 ataatccagc ccggtttcac ccagcgctac aacaccctct tctgccgcca gacgacgtaa
    26941 atcttctaca tcgtagggat cattctggtt gagtggatgc acgccacaag aaaatacgac
    27001 gttgtcacgt tcgcctacca gatcccgcat atgtaaataa cccgttaatg ttgtggcgac
    27061 tgccagacaa aatttcacat cgcgtgcggc ggctttcgcc agaacgtcat ccacgtcctt
    27121 atgcaaagat tcataatcca gaccatcgag atggcagtgt gagtcgacta aaaacatgat
    27181 gtctctctta aagatgagga accggtagca caacgcccgg ttgcaggtaa tgctcaatac
    27241 gcagtaaaag atcggtgatg agaagctcgc ggttgatgcc tgtgacagac attaactgtt
    27301 cacgaatgtg gcaaacatcc cccagtatag cctgcaggcg cgagggagaa agatggtttg
    27361 ccagttcggc gaccaggccc ggcacatcaa cattggtcac ctgtgcagcg ccatgatggc
    27421 gttttagcgc atccatcagc aacgttgcca gccagtgtaa acgcgccgga gcttgttcat
    27481 gattaagggc cgccagcagc gaataccagt cgcccgatgg tacgctatat gccaacgcct
    27541 gacacaatgt ttcacgagcc tgccagttat ctccctgaaa caacgccagt gccgcgccag
    27601 gcgaaccggc acttaagcgc aatgcggcaa gtaatgcatc ctgtgacatt gtcacttcgc
    27661 gtgaaagcca ggtcacggcg tactgttccg gcggcggcgc aaggtaatgt aaccgacaac
    27721 gactacgtaa tgttgccagt aaacgttcag gctcgcgggt agccaggaaa aaccaggttt
    27781 ctgctggtgg ctcttcaagc gttttcagca atgcgttagc cgcggcgtcg gtcagtaagg
    27841 cagcatcggt tacccagaca actttcgcac cacctaggcg tgcgtgctca ttcagctttt
    27901 cggtgacctc acgtaccgca tcaatgccca gcgtattttt ccctttttcg ggagccaggg
    27961 tgtagtaatc gggatgcgtg ccagcctgca tcaactgaca tccacgacag tgaccgcaac
    28021 ttttgtggcc ctgcggttgt tggcagagta aataacggct cagggcgtag attaaagcat
    28081 catcgcccat gcccggtaac gcctgaatga gtagcgcatg gtgacctctt ccggcctgat
    28141 agctggctac cagtttttcg aaatcaggtc gtaaccatgg ataccatctc atgcgtccaa
    28201 ctccttcacc cagtgggtca cggtagtgcg gattgcatcc atcacggcct ccagcggctg
    28261 ggtggcatca atggtatgaa tacttttatc ttgtgcagcc agttccagat agcgggcgcg
    28321 ggtgcgatta aagaaatcga aagactcttg ctcaatacga tccagctcgc cgcgcgcacg
    28381 cgcgcgtttt aagccaactt ccggggtaac atcgagatag agcgttaagt cggggcgaaa
    28441 atccccgaga acagcatcac gcagtgttgc cagcatatgt tggtcaatac cacgtcctcc
    28501 gccctgatac gcctgagtgg agagatcgtg gcgatcgcca atcacccagg tgccgttagc
    28561 cagagctggt ttgatgaccg tttctaccag ttgaacgcgc gcggcataaa acatcagaac
    28621 ttcggcttta tcggtaatga cttcatcgcc taccgatttg atatccagca ccaggcttct
    28681 taacttttcg gcaagttgcg taccgccagg ttcccgagtg aaaaccatgt cgcggatacc
    28741 cagttgctca agcgtctcaa ccaccacatt acgcgcggta gttttgcctg cgccttccag
    28801 cccctcaatg acgatatact tactgcgcat ttttttcctt aagcactttc agataatcct
    28861 gcacagactt gttatggctg gcaagattgg tattaaacgt gtgaccacct ttaccatcgg
    28921 ccacaaaata gagatacggc gtttttgccg gatgcgcagc agccttcagc gaatccgccc
    28981 ccggcgtagc tatcgcacct ggcggcaaac cggtaatggt ataggtgtta tacgctgtcg
    29041 gcgtttccag gtctgcacga gaaagtttgc cattataacg ctctcccatc ccgtaaatca
    29101 cggttgggtc ggtctgcagg cgcataccaa tgcgtaaacg gttgataaat accgaggcaa
    29161 cctgatcgcg ttcactggca acggcggttt ctttttcgat aattgatgcc atcgtcacca
    29221 gctggttttt atctttataa ggcagaccgt ccgcacgccc ttcccaggcg ctatcgaccg
    29281 ctttcaccat tttcttgtgc gctcgcttga gtaacgcgac atcggtggta ttggcggtat
    29341 acatccaggt gtctggccag aaccaacctt caatccactc cgggttttcc agttcaagtg
    29401 cctgcgctac ggtggcgtac ttatcgtcac tcagcgtgtg cttgatatac ggagcctcac
    29461 gcaattgctt gaggtagtcg ctcagacgca tcccttctac cagtcgcagc gggaactgtg
    29521 cttctttacc gctttccagc aatttcagca tctcgcgcac ggtcatctgc ggtgtaaagc
    29581 ggtaagtccc ggctttaaag tgagaaagat ccggttcgat acgcagcaac cattgaaaaa
    29641 cccgtgggcg attgatgatc ttatcggcat aaagctgttc accaagcgcc agacgtccgg
    29701 tccctggctt cagggtaaat atcgtctctt ctttgataag caatttgctg tcggcaagat
    29761 ggcgaacctt ccagacgccc acaccagcgg cgatacccag taccaccagc aataacaaga
    29821 taatcaataa cacttttttc atgactaatt cgggcgctca caaagtgggg ctaaatattc
    29881 atataacgtt gctgacgaaa aggagacatc gccacaggca cgtacgggca tcactggcat
    29941 taacgcatta caaataacca tctcatctgc ctgcaacgcc tcttccagag aggcttgcac
    30001 ttcgacaagc tgataagagg attgtgccag caaacggata cagaattgtc gcataatgcc
    30061 gttaacacct gcctgatcca gtcgcggcgt ataaactaca ttgctcttcc gccagaacaa
    30121 attagccgca cagcattccg taacccaccc ttcgctgtca aggaccagcg cctcatcagc
    30181 gtttgtctgc tcaagatgag agcggatcaa tacttgctca agccgattaa gatgtttaat
    30241 acctgcaaga tggggattgc gccccagccg caccgggctt agcgccaacg tcatcccttc
    30301 gttacgcaaa cggtcgtaat gtgcaggata aaccgtaatg gagagaatcc gcgttgccgg
    30361 tccactgttc aatgtgctgt accctcgccc gccactaccg cgactgatca cgactttcag
    30421 cacaccattt tgctgttctg ctgccagcgt tttcatctct tgttcaagct gaggccagaa
    30481 gtcacagaaa atcatcaacc gctgacaagc atcctgtagt cgctggatat gcgccgataa
    30541 caaactgact ttaccgtcga taactctggc ggtggtaaaa caaccatcac caaactgcgt
    30601 tgcccgatcg cttactgcca gcgattcctg cttatgaccg ttaattaaga acataccggc
    30661 tccttatcag agaattgtta gtgtggcagc atgttcacta cggaacaagt cggaataaaa
    30721 gctaagaaaa aaggcccgca agcggacctt ttatatgggt gggaaatgac aacttagatc
    30781 tttttaaaga tcaaagaacc attagtgcca ccgaagccga aggagttaca cagcgtgtat
    30841 tccattccgc tgacctgacg tgcttcatgc ggtacgaaat ccagatcgca accttcatcc
    30901 aggttatcca ggttgatggt tggcggaaca gcctgatcgc gcagcgccag gatggagtag
    30961 atagactcta ctgcccccgc cgcacctaac aggtgaccgg tcatagattt cgtggagctt
    31021 accaacacac ggcttgcagc ttcaccgaag atggctttca ccgcctgcgc ttcagcttta
    31081 tcgccagccg gcgtagaagt accgtgcgcg ttaacgtagc caatctgact cgcttcaatg
    31141 cctgcatcac gcagagcatt tgccattgcc agagctgcgc ctgcgccatt ttctggcggt
    31201 gacgtcatat gataagcatc gctgctcata ccaaagccga cgagttcagc gtaaattttc
    31261 gcaccgcgtt ttttcgcgtg ttcgtactct tctagtacca gcataccggc accatcgccc
    31321 agtacgaagc catcacgctc tttatcccac gggcggctcg ccgcttgcgg gttatcattg
    31381 cgggtagata atgcacgtgc cgcgccaaaa ccaccaacgc ccagcggcgt actggctttc
    31441 tctgcgccac ctgcaaccat cacgtcagca tcgccatacg cgataatacg cgcagcatga
    31501 ccaatgttgt gcacgccgga agtacaggcg gtcgcgatag agatgcttgg gccacgcagg
    31561 ccatacatga tagtcagatg acctgccacc atgttcacaa tcgttgacgg aacgaagaat
    31621 gggctgatct tacgtggacc accgttcatc agagatgtgt ggttttcttc gatcagtccg
    31681 aggccgccaa tcccggagcc aattgcggca ccaatgcggg ttgcgttctc ttccgttatt
    31741 tcaaggccag aatcctgcat ggcctgaacg ccagcgacaa ttccatattg aatgaaggca
    31801 tccatcttgc gctgttcttt gcgcgagata atgtcctcac agttaaaatc ctttactaag
    31861 ccagcaaatt tcgttgcata ggcgctagta tcgaaatggt cgattaggct gatgccactc
    31921 tgaccggcaa gcagagcttt ccaggtagac tctacggtat tgccgacagg agacaacatg
    31981 cccagtccgg tcacaactac acgacgctta gacacgtttg tcctccaggg agggaaaaaa
    32041 tgattctagt gggacaaaaa gataaaactc aggcggtcga acgaccgcct ggagatgttc
    32101 acttacgcct ggtggccgtt gatgtaatca atggcagcct gaacggtggt gattttctca
    32161 gcttcttcgt ccggaatctc agtatcaaac tcttcttcca gagccattac cagctcaacg
    32221 gtgtcaagag aatccgcgcc caggtcttca acgaaagaag cattgttggt aacttcttcc
    32281 tgcttaacgc ccagctgttc gccgataatt ttcttaacgc gttcttcgat agtgctcata
    32341 ctcttaaatt tcctatcaaa actcgctttc gcgatggttt tcgtagtgta taaaatgttg
    32401 aaaaatttgc aactaaatcc cggcaggtct taccacgatt ttacgttatt ttgaggcctt
    32461 accccccaat aacgcaaatc attttgcact aattattact cataaccacg cagactgcgc
    32521 gcaacatgag cattttgtgc aaatcgcggt cagaccatgt acatcccgcc gttcacatgc
    32581 aaagtttcac ccgtgatgta agctgcttcg tcggatgcca ggaatgcaac cgcgttggcg
    32641 atttcctgtg cgccgccgag gcgacccgca ggaacctgcg ccaggatacc cgcacgctgg
    32701 tcatcgctca gcgcacgtgt catgtccgtt tcaataaagc ccggagcaac aacgtttaca
    32761 gtaataccgc gtgacgcaac ttcgcgcgcc agtgatttac tgaagccgat caagcccgct
    32821 ttcgccgcag cgtagttggc ctgaccgcca tttcccatgg taccaaccac agaaccgata
    32881 gtgataatac gaccatgacg ctttttcatc atagcgcgca ttaccgcttt tgacagacgg
    32941 aaaacagatg aaaggttggt ttcgataata tcgttccact cttcatcttt cattcgcatt
    33001 aacaggttat cacgagtgat accggcatta ttgaccagga tatccacttc accaaattct
    33061 gcgcgaattt tttccagaac agattcgata gatgccgggt cggtcacatt caacatcaga
    33121 cctttgccgt tagcacctaa ataatcactg atcgcctgag cgccattttc actggtcgca
    33181 gtgccaataa ctttcgcgcc acgggctgcg agcgtttcag caattgcgcg gccaattccg
    33241 cggcttgcac cggttaccag tgcgattttt ccttcaaaat tcatgatttt cctcttttaa
    33301 agctcgagcg ccgctgccat cgctgaaggt tcgttcagcg ccgaggcggt cagggtgtcg
    33361 acaatgcgtt tcgtcaggcc agttagcact ttgcccgggc cgacttcata gagatgttct
    33421 acgccttgcg ctgccatgta ctcaacagac ttcgtccact gaaccgggtt atacaactga
    33481 cgtaccagtg cgtcacgaat ggcatcacca ttggtttcgc atttcacatc aacgttattc
    33541 acaacaggaa ctgttggtgc gttaaaggtg attttcgcta attctactgc cagtttgtcg
    33601 gctgctggtt tcatcagcgc acagtgagac ggtacgctca ctggtaacgg cagcgcgcgt
    33661 tttgcgcccg cagctttaca ggcagcgcca gcacgctcaa ccgcctcttt atgaccggca
    33721 ataaccacct gtcccggaga gttaaagttt accggagaaa cgacctgacc ttctgcagct
    33781 tcttcacacg ctttcgcaat agacgcatca tccagaccga tgattgccgc catagcgccc
    33841 gtgccttctg gtacggcttc ttgcatgaac ttgccgcgca tctcaaccag acgcaccgca
    33901 tcagcgaaat caatcacgcc agcgcaaacc aacgcggagt attcccccag gctgtgaccg
    33961 gccatcattg ccggtgcttt accgccctgc tgctgccata cgcgatacag cgcaacagat
    34021 gcagtcaaca gcgctggctg ggtttgccag gttttattca gttcttcagc tggcccctgc
    34081 tgggtcagcg cccacaggtc gtagcccagc gccgcagaag cttcagcaaa cgtttcttcg
    34141 acaattggat agctcgccgc catatcagcc agcattccaa cggtttgaga accctgtcca
    34201 gggaacacaa atgcaaattg cgtcatgttt taatccttat cctagaaacg aaccagcgcg
    34261 gagccccagg tgaatccacc gccaaaggct tcaagcagaa ccaactgccc cggcttaatg
    34321 cgcccgtcgc gtacagcttc atccagcgcg cacgggacag aggccgcaga ggtattaccg
    34381 tggcgatcca gcgtcaccac gacattgtcc atagacatac cgagtttttt cgccgttgca
    34441 ctgataatac gcaggttagc ctgatgcgga accagccagt ccagttgaga acggtcaaga
    34501 ttattcgccg ccagcgtctc atcaacgatg tgcgccagtt ccgttaccgc aaccttgaag
    34561 acttcgttgc ccgccatcgt cagatgaatt gaattctctg gattcacgcg gtcggcgttt
    34621 ggcagcgtca gcaattcacc ataactaccg tcggcatgca gatgggtgga gatgattccc
    34681 ggctcttcag aggcagccag caccgcagcg cccgcgccat cgccaaaaat aataatagtc
    34741 ccacgatctg ttggatcgca ggtgcgcgcc agtacatcgg aaccgacgac cagagcatac
    34801 ttcaccgccc cagatttcac gtattgatcg gctacgctta atgcataggt gaaacctgcg
    34861 caggctgctg caacgtcaaa tgccgggcaa cctttaatgc ccaacatgct ttgaatctga
    34921 caagctgcgc tcgggaaagc gtgcgtagca gaagtcgttg ccacaacgat caggccaatc
    34981 tggtctttct caatgcccgc catctcaatt gcgcgtgtcg ccgcttcaaa gcccatggtt
    35041 gaaacggttt cgtttggcgc ggcaatgtgg cgttcgcgga taccggtacg agtgacaatc
    35101 cactcgtcag aggtgtccac cattttttcc aaatcggcgt ttgtccgcac ttgttcgggc
    35161 agatagctgc cagtaccaat aatcttcgta tacatgtacg ctcagtcact tttcggttat
    35221 ataccgtcac ttgcaaactg cgagttcgct ggcagcgtcc tgctaccgca gagttccgct
    35281 tttgccaccg tccagcagct caaaaccagc tgggtataca gattccaggc gagcggcaat
    35341 tcgctgagga acttgtcgct gcaccgcctg cactgcctgt tcaatcgcga ccgcaaaagc
    35401 tcgctgattg gctgcaccat gactttttat caccgtgccg cgcaatccta acagacaggc
    35461 gccgttatac tggtcggggt tgaggtgact gaatcgcctc gtcaggctct tttgtagcca
    35521 acgctttaat aacagtagcc accacgaccg ttttttccct tcaccctgag atttcagcag
    35581 agaaaggaac atcctgacaa caccttccat cgtctttaac gtgacatttc ctgtaaagcc
    35641 gtcacaaacc agcacatctg tcttgccagt taacaactca ttggcttcaa gatagccgat
    35701 ataattgata gaagggattg ttttaagcac cgctgaggca tcccgaatac tgtcgagacc
    35761 ctttacttct tcttcaccaa tattgagcaa cgccacgcga ggattgggaa tttccaccac
    35821 ctcttcagcc agaactgagc ccataatggc aaattgcacc aacattgtgc tgtcacaatc
    35881 gacgttggcc cctaaatcga ggaccaccgt tttgcccttt tgctgatgtg gtaataccgt
    35941 caccagcgcc ggacgctcaa tcccctccaa gggcttgagt aataattttg ccagccccat
    36001 cagtgccccg gtattaccgg cactgacaca ggcttgcgct cgaccttctt tcaccagctc
    36061 cagggtcata cgcattgaac tcccacgact agcgcggata gcttgcgaag gccgggcatc
    36121 actggcgata actgactgcg caggaataat ctgcagacgc gaacgttgtt caaagtcagc
    36181 tttagcaagt aatggcgtga tggcgtcggg attgccgact aaaagaagag tgagttgcga
    36241 attagaattc agtgcctgca atgctgcagg cactgtcacg gaagggccaa aatcccctcc
    36301 catgacatct aacgccaggg ttagacgtgt caaggtatcg tcgccgcccg gtttggtctt
    36361 tccccagttg cctggggaaa atcctcacta agcttcatca cgcagacgcg tgattactta
    36421 gcgatgacct tgcggccgcg gtagtaaccg tcggcagtga tatggtgacg caggtgtttt
    36481 tcaccagaag ttttgtctac agacaggctg gtgactgcgg tcagcgcgtc atgggaacga
    36541 cgcatgccac gtttggaacg ggttggttta ttctgttgta cggccatgga ccttactcct
    36601 caattacggt ttatccccga tccaacgggg agcaccaatt acttacgctt taagctggct
    36661 aatacggcaa atgggtttgg cttttgcact tcttcaggca gttcaccaaa gaccatgtcc
    36721 gcttcggaca cttcacagtg ttcagaatca tgcaccggaa ctaccggcaa ggcgaggatg
    36781 atttcatctt caaccattgc aagcagatcg atttcaccga attcgttaac ctcaatcggt
    36841 tcatacgctt ccggcagtgc ttcagcctgt tcgtctgaac gcacaggact aaaacaatac
    36901 gttgtgtaga cctgatgagt aaacggcttc ccgcaacgct gacactcgag cgttaccgtc
    36961 accttcgcat cgccgtttaa cactgcgaga cgttggttat cgatagcgaa cgacatggag
    37021 cattccacat cactgtccac actgaccacg gattcggcga cgcgctcaac ctgatcaggg
    37081 gtatagatac cctggtaatc aaggcgtttt tgagccgtac gaaccggatc gagagtcagg
    37141 ggtaatttta ccttttgcat agggcgcgca tattaacttt gtaacgtcat agagtcaaag
    37201 aaaaaggcag cctgtggttg ccttttgcca ataattcgca cacattgcgg gttactgctt
    37261 tattttcgtt cagtgctgat aacgaacatc aacctgcaaa acgaagcgca tagtttaaaa
    37321 tggctatcat caatacgcta tatctgatgg aaaaaaatat gcctaaactt attttagcct
    37381 ccacctcgcc atggcgtcgc gctcttctgg aaaaactgca aatctctttt gaatgtgcag
    37441 caccagaggt cgacgaaacc ccacgcagcg acgaatcacc gcgacagttg gtgcttcgac
    37501 tggcacaaga aaaagcgcaa tctctggcgt cacgttatcc ggatcattta attattggtt
    37561 cagaccaggt atgtgttctt gatggcgaaa tcaccggtaa accgttaacg gaagaaaatg
    37621 cccgtctgca attacgcaaa gccagcggca atatcgtcac cttctatact ggactggcgt
    37681 tgtttaattc ggcgaatggg tatctacaaa cagaagtgga gccttttgac gtccatttcc
    37741 gtcacctgag cgaggcggag attgataatt acgtgcgtaa ggagcatccc ctgcactgcg
    37801 cgggtagctt taagagtgaa ggatttggca ttacgctgtt tgagcgttta gagggacgtg
    37861 accctaacac gctggttggt ttaccgctaa tcgcgctgtg tcagatgtta cgtcgggaag
    37921 ggaaaaaccc gctgatggga tagttgtttg cgccggatgc ggttacgtcg catccggcaa
    37981 tcggtgcagg cggcctgatg cggcgtaaac gccttatcag gccaaccgcc cattatcagg
    38041 cttatatgct tgtattagcg cgcgttacgc agcttttgca aacaacgctt caaaccttca
    38101 tccatcggcg cttcgatacg catcacctca ccggtccccg gatgggtaaa cttcaacgct
    38161 gcggcgtgca ggaacagacg atttaatccc gtgcctgctt cagtgagctg tctgtcaaat
    38221 tcacggtcac cgtagcgatc gtcaaaggca atcggatgac ccgcatactg tgtatgcaca
    38281 cggatctgat gagtacgtcc ggttaccggg ctacaacgca ccagggtggc aaatgcatag
    38341 cgttcttcca ctttaaagcg tgtttccgac ggtttgcctt cctgactgac acgcacgata
    38401 cgttcgccgc tttgcagaat atttttcaat aacggcgctt gaacgctctt cacatgcgac
    38461 tgccactgac tgcgcaccag cgccaggtaa tctttttgca ttcctttttc acgtaattgc
    38521 tcatgcagag aacgcaacgc cgagcgtttt ttcgctacca gcaacacacc tgaagtgtcc
    38581 cggtcgagac gatgaaccag ttcaaggaac cgcgcttccg ggcgcaacgc ccgcaaacct
    38641 tcgataacgc cgaagcttaa accactgccg ccatgtaccg ccgtaccgga aggtttattc
    38701 agcaccagga tatgatcatc ttcatataag atgacgtccg ccagcgccgc caccttttgc
    38761 agatgtggcg aaaccgcctc ttcttcccgc tcagcaacgc gaaccggtgg gatacgcacc
    38821 tcatcacccg cttcgagttt atattcaggc ttaatacgtt ttttgttcac ccgcacttcg
    38881 cctttacgca aaatacggta aatcatactt tttggtacgc ctttcaattg ggtacgcaaa
    38941 aagttgtcga tacgttgccc cgcttcgtca gcggtgatag caacaatttt tacggatgga
    39001 gtctctgttt tcatggtggg cgattctaat tagccaacag gattcgcgcc actcattttt
    39061 ctatgcttat atttagtttt acaccttatt acttcactac gtgatcactt tattgatggt
    39121 tattaaacca atcaccagca agaagt
//
LOCUS       DADMHC010000012        38318 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.012, whole genome shotgun sequence.
ACCESSION   DADMHC010000012 DADMHC010000000
VERSION     DADMHC010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 38318)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38318)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38318
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.012"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(301..1941)
                     /gene="pgm"
                     /locus_tag="JNZ57_000508"
     CDS             complement(301..1941)
                     /gene="pgm"
                     /locus_tag="JNZ57_000508"
                     /EC_number="5.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-glucose phosphate-specific
                     phosphoglucomutase"
                     /protein_id="HAY8826840.1"
                     /translation="MAIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGT
                     SGHRGSAARHSFNEPHILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVL
                     AANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPP
                     NGGPADTNVTKVVEDRANALLADGLKGVKRISLDEAMASGHVKEQDLVQPFVEGLADI
                     VDMAAIQKAGLTLGVDPLGGSGIEYWKRIGEYYNLNLTIVNDQVDQTFRFMHLDKDGA
                     IRMDCSSECAMAGLLALRDKFDLAFANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQ
                     HRPQWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEES
                     AGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKNPQEHYNELAKRFGAPSYNRLQA
                     AATSAQKAALSKLSPEMVSASTLAGDPITARLTAAPGNGASIGGLKVMTDNGWFAARP
                     SGTEDAYKIYCESFLGEEHRKQIEKEAVEIVSEVLKNA"
     gene            complement(1967..2512)
                     /gene="seqA"
                     /locus_tag="JNZ57_000509"
     CDS             complement(1967..2512)
                     /gene="seqA"
                     /locus_tag="JNZ57_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation negative regulator SeqA"
                     /protein_id="HAY8826841.1"
                     /translation="MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFSAASQPAAP
                     VTKEVRVASPAIVEAKPVKTIKDKVRAMRELLLSDEYAEQKRAVNRFMLLLSTLYSLD
                     AQAFAEATESLHGRTRVYFAADEQTLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMI
                     EHIMQSMQFPAELIEKVCGTI"
     gene            2697..3461
                     /gene="ybfF"
                     /locus_tag="JNZ57_000510"
     CDS             2697..3461
                     /gene="ybfF"
                     /locus_tag="JNZ57_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HAY8826842.1"
                     /translation="MKLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHN
                     IIQVDMRNHGLSPRDPVMNYPAMAQDLVDTLDAQQIDKATFIGHSMGGKAVMALTALA
                     RDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQ
                     FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPSGNSPYVSEQYRDDLL
                     AQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND"
     gene            3532..3894
                     /gene="ybfE"
                     /locus_tag="JNZ57_000511"
     CDS             3532..3894
                     /gene="ybfE"
                     /locus_tag="JNZ57_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA regulated protein"
                     /protein_id="HAY8826843.1"
                     /translation="MYYGALSIRAEAWLIVSPEVTKIMAKEQTDRTTLDLFAHERRPG
                     RPKTNPLSRDEQLRINKRNQLKRDKVRGLKRVELKLNAEAVEALNELAESRNMSRSEL
                     IEEMLMQQLAALRSQGIV"
     gene            4034..4564
                     /gene="fldA"
                     /locus_tag="JNZ57_000512"
     CDS             4034..4564
                     /gene="fldA"
                     /locus_tag="JNZ57_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HAY8826844.1"
                     /translation="MAITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDL
                     EAYDILLLGIPTWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDAL
                     GTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKW
                     VKQISEELHLDEILNA"
     gene            4774..4860
                     /gene="uof"
                     /locus_tag="JNZ57_000513"
     CDS             4774..4860
                     /gene="uof"
                     /locus_tag="JNZ57_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001491546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fur leader peptide"
                     /protein_id="HAY8826845.1"
                     /translation="MIRIISRANSVTSSNEVNRLVTGQIPHD"
     gene            4853..5299
                     /gene="fur"
                     /locus_tag="JNZ57_000514"
     CDS             4853..5299
                     /gene="fur"
                     /locus_tag="JNZ57_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HAY8826846.1"
                     /translation="MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLI
                     DMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEF
                     SDDSIEARQREIAAKHGIRLTNHSLYLYGHCAEGDCREDEHAHEGK"
     gene            complement(5384..5710)
                     /locus_tag="JNZ57_000515"
     CDS             complement(5384..5710)
                     /locus_tag="JNZ57_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8826847.1"
                     /translation="MKKLILIAIMASGLVACAQSTAPQEDSRLKEAYSACINTAQGSP
                     EKIEACQSVLNVLKKEKQHQHFADQESVRVLDYQQCLRATQTGNDQAVKADCDKVWQE
                     IRSNNK"
     gene            complement(5760..7166)
                     /gene="chiP"
                     /locus_tag="JNZ57_000516"
     CDS             complement(5760..7166)
                     /gene="chiP"
                     /locus_tag="JNZ57_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitoporin"
                     /protein_id="HAY8826848.1"
                     /translation="MRTFSGKRSTLALAIAGVTAMSGFMAMPEARAEGFIDDSTLTGG
                     IYYWQRERDRKDVTDGDKYKTNLSHSTWNANLDFQSGYAADMFGLDIAVFTAIEMAEN
                     GDSSHPNEIAFSKSNKAYDEDWSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLL
                     APHWSFMPGTYQGAEAGANFDYGDAGALSFSYMWTNEYKAPWHLEMDEFYQNDKTTKV
                     DYLHSLGAKYDFKNNFVLEAAFGQAEGYIDQYFAKASYKFDIAGSPLTTSYQFYGTRD
                     KVDDRSVNDLYDGTAWLQALTFGYRAADVVDLRLEGTWVKADGQQGYFLQRMTPTYAS
                     SNGRLDIWWDNRSDFNANGEKAVFFGAMYDLKNWNLPGFAIGASYVYAWDAKPATWQS
                     NPDAYYDKNRTIEESAYSLDAVYTIQDGRAKGTMFKLHFTEYDNHSDIPSWGGGYGNI
                     FQDERDVKFMVIAPFTIF"
     gene            complement(7613..9277)
                     /gene="glnS"
                     /locus_tag="JNZ57_000517"
     CDS             complement(7613..9277)
                     /gene="glnS"
                     /locus_tag="JNZ57_000517"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HAY8826849.1"
                     /translation="MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGH
                     AKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSD
                     YFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEK
                     MRAGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCI
                     SDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNL
                     LVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIRE
                     DLNENAPRAMAVIDPVKLVIENYQGEGEMVTMPNHPNKPEMGSRQVPFSGEIWIDRAD
                     FREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPADG
                     RKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSL
                     KDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVGE"
     gene            complement(9480..11426)
                     /gene="nagE"
                     /locus_tag="JNZ57_000518"
     CDS             complement(9480..11426)
                     /gene="nagE"
                     /locus_tag="JNZ57_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetyl glucosamine transporter subunit
                     IIABC"
                     /protein_id="HAY8826850.1"
                     /translation="MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFIAQA
                     GGAIFDNLALIFAIGVASSWSKDSAGAAALAGAVGYFVLTKAMVTINPEINMGVLAGI
                     ITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIH
                     AGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINR
                     FYAGDGTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGV
                     TEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAGFSFSAGAIDYALMYNLPAAS
                     QNVWMLLVMGVVFFAIYFVVFSLVIRMFNLKTPGREDKEDEIVTEEANSNTEEGLNQL
                     ATNYIAAVGGTDNLKAIDACITRLRLTVADSARVNDTMCKRLGASGVVKLNKQTIQVI
                     VGAKAESIGDAMKKVVARGPVAAASAEATPSTAAPVAKPQAVPNAVSIAELVSPITGD
                     VVALDQVPDEAFASKAVGDGVAVKPTDKIVVSPAAGTIVKIFNTNHAFCLETEKGAEI
                     VVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILEMDLDYLNANARSMISPVVCSNIDD
                     FSGLIIKAQGHVVAGQTPLYEIKK"
     gene            11760..12560
                     /gene="nagB"
                     /locus_tag="JNZ57_000519"
     CDS             11760..12560
                     /gene="nagB"
                     /locus_tag="JNZ57_000519"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008805656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HAY8826851.1"
                     /translation="MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGT
                     PMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAE
                     NINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIK
                     TLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEG
                     CVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNELEAENIKGL"
     gene            12620..13768
                     /gene="nagA"
                     /locus_tag="JNZ57_000520"
     CDS             12620..13768
                     /gene="nagA"
                     /locus_tag="JNZ57_000520"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HAY8826852.1"
                     /translation="MYALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQR
                     SLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITT
                     SDELMKQGVRVMREYLARHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLC
                     ENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLY
                     NAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATA
                     PAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRM
                     ATLYPARAIGVEKRLGTLAAGKVANLTAFTPDFKITKTIVNGNEVVTQ"
     gene            13777..14997
                     /gene="nagC"
                     /locus_tag="JNZ57_000521"
                     /gene_synonym="nagR"
     CDS             13777..14997
                     /gene="nagC"
                     /locus_tag="JNZ57_000521"
                     /gene_synonym="nagR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator NagC"
                     /protein_id="HAY8826853.1"
                     /translation="MTPGGQAQIGNVDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQL
                     APASVTKITRQLIERGLIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDATITL
                     FDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDP
                     DSGKIHYMPHIQVENWGLVEALEERFKVTCFVGHDIRSLALAEHYFGASQDCEDSILV
                     RVHRGTGAGIISNGRIFIGRNGNVGEIGHIQVEPLGERCHCGNFGCLETIAANAAIEQ
                     RVLNLLKQGYQSRVPLDDCTIKTICKAANKGDSLASEVIEYVGRHLGKTIAIAINLFN
                     PQKIVIAGEITEADKVLLPAIESCINTQALKAFRTNLPVVRSELDHRSAIGAFALVKR
                     AMLNGILLQHLLEN"
     gene            15045..15797
                     /gene="nagD"
                     /locus_tag="JNZ57_000522"
     CDS             15045..15797
                     /gene="nagD"
                     /locus_tag="JNZ57_000522"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide monophosphatase NagD"
                     /protein_id="HAY8826854.1"
                     /translation="MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNY
                     PSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKA
                     GFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALC
                     AGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETI
                     LVLSGVSSLDDIDSMPFRPSWIYPSVAKIDVI"
     gene            16194..17858
                     /gene="asnB"
                     /locus_tag="JNZ57_000523"
     CDS             16194..17858
                     /gene="asnB"
                     /locus_tag="JNZ57_000523"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001724523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase B"
                     /protein_id="HAY8826855.1"
                     /translation="MCSIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNA
                     ILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEV
                     ILALYQEKGPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVTS
                     EMKSLVPVCRTIKEFPAGSYLWSQDGEIRSYYHRDWFDFDAVKDNVTDKNELRQALED
                     SVKSHLMSDVPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLP
                     GSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMS
                     RKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKELHEETVRKLLALHMYDCARANKA
                     MSAWGVEARVPFLDKKFLDVAMRINPQDKMCGNGKMEKHILRECFESYLPASVAWRQK
                     EQFSDGVGYSWIDTLKEVAAQQVSNQQLETARFRFPYNTPTSKEAYLYREIFEELFPL
                     PSAAECVPGGPSVACSSAKAIEWDEAFKKMDDPSGRAVGVHQSAYK"
     gene            18239..18315
                     /locus_tag="JNZ57_000524"
     tRNA            18239..18315
                     /locus_tag="JNZ57_000524"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:18273..18275,aa:Met,seq:cat)
     gene            18324..18408
                     /locus_tag="JNZ57_000525"
     tRNA            18324..18408
                     /locus_tag="JNZ57_000525"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:18358..18360,aa:Leu,seq:tag)
     gene            18432..18506
                     /locus_tag="JNZ57_000526"
     tRNA            18432..18506
                     /locus_tag="JNZ57_000526"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:18464..18466,aa:Gln,seq:ttg)
     gene            18541..18615
                     /locus_tag="JNZ57_000527"
     tRNA            18541..18615
                     /locus_tag="JNZ57_000527"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:18573..18575,aa:Gln,seq:ttg)
     gene            18631..18707
                     /locus_tag="JNZ57_000528"
     tRNA            18631..18707
                     /locus_tag="JNZ57_000528"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:18665..18667,aa:Met,seq:cat)
     gene            18756..18830
                     /locus_tag="JNZ57_000529"
     tRNA            18756..18830
                     /locus_tag="JNZ57_000529"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:18788..18790,aa:Gln,seq:ctg)
     gene            18868..18942
                     /locus_tag="JNZ57_000530"
     tRNA            18868..18942
                     /locus_tag="JNZ57_000530"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:18900..18902,aa:Gln,seq:ctg)
     gene            complement(19096..20271)
                     /gene="ubiF"
                     /locus_tag="JNZ57_000531"
     CDS             complement(19096..20271)
                     /gene="ubiF"
                     /locus_tag="JNZ57_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706550.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol
                     hydroxylase"
                     /protein_id="HAY8826856.1"
                     /translation="MTNQPTEIAIVGGGMVGGALALGLAQHGFSVTVIEHAEPAPFVA
                     DSQPDVRISAISAASVSLLKGLGVWDAVQAMRCHPYRRLETWEWETAHVVFDAAELKL
                     PLLGYMVENTVLQQALWQALEAHPKVTLRVPGSLIALHRDNDLQELELKGGETIRAKL
                     VIGADGANSQVRQMAGIGVHAWQYAQSCMLISVQCENDPGDSTWQQFTPDGPRAFLPL
                     FDNWASLVWYDSPARIRQLQNMNMAQLQAEIAKHFPSRLGYVTPLAAGAFPLTRRHAL
                     QYVQPGLALVGDAAHTIHPLAGQGVNLGYRDVDALIDVLVNARSYGEAWASYPVLKRY
                     QMRRMADNFIMQSGMDLFYAGFSNNLPPLRFVRNLGLMAAERAGVLKRQALKYALGL"
     gene            20417..21841
                     /gene="miaB"
                     /locus_tag="JNZ57_000532"
     CDS             20417..21841
                     /gene="miaB"
                     /locus_tag="JNZ57_000532"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HAY8826857.1"
                     /translation="MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVL
                     LLNTCSIREKAQEKVFHQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDII
                     FGPQTLHRLPEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKY
                     CTYCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGSTGSF
                     ADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNL
                     MGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADVNFDMSY
                     SFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRILVEGT
                     SRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRGKVVRTEDEMGLRV
                     AETPESVIARTRKENDLGVGYYQP"
     gene            21955..23034
                     /locus_tag="JNZ57_000533"
     CDS             21955..23034
                     /locus_tag="JNZ57_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706552.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HAY8826858.1"
                     /translation="MFSFRRHTDKRNGLNIDTREITLEPADNARLLSLCGPFDDNIKQ
                     LERRLGIEINRRDNHFKLTGRPICVTAAADILRSLYVDTAPMRGQIQDIEPEQIHLTI
                     KEARVLEQSAESVPEYGKAVNIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTG
                     KTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFE
                     MLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNS
                     KAVITGDVTQIDLPRNTKSGLRHAIEVLADVEEISFNFFHSEDVVRHPVVARIVNAYE
                     AWEEAEQKRKAALAAERKREEQEQK"
     gene            23031..23498
                     /gene="ybeY"
                     /locus_tag="JNZ57_000534"
     CDS             23031..23498
                     /gene="ybeY"
                     /locus_tag="JNZ57_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014169133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HAY8826859.1"
                     /translation="MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQFQEESEVTIR
                     VVDTAESHSLNLTYRGKDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGK
                     PLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETKIMLALGYEDPYIAEKE"
     gene            23588..24466
                     /gene="corC"
                     /locus_tag="JNZ57_000535"
     CDS             23588..24466
                     /gene="corC"
                     /locus_tag="JNZ57_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308723.1"
                     /note="CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter
                     (CNNM) family, and was characterized as belonging to a set
                     of three proteins, at least one of which must be present
                     for CorA to function; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family magnesium/cobalt transport protein
                     CorC"
                     /protein_id="HAY8826860.1"
                     /translation="MSDDNSHSSDTISNKKGFFSLLLSQLFHGEPKNRDELLALIRDS
                     GQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSR
                     FPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRS
                     QRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALA
                     SIEDFNEAFGTHFSDEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQ
                     VHVKIPDDSPQPKLDE"
     gene            24491..26029
                     /gene="lnt"
                     /locus_tag="JNZ57_000536"
     CDS             24491..26029
                     /gene="lnt"
                     /locus_tag="JNZ57_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HAY8826861.1"
                     /translation="MAFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGL
                     QALTFNRRPLQSAAIGFCWGFGLFGSGINWVYVSIATFGGMPGPVNIFLVVVLAAYLS
                     LYTGLFAGVLSRLWPKTTWLRVAIAAPALWQVTEFLRGWVLTGFPWLQFGYSQIDGPL
                     KGLAPIMGVEAINFLLMMVSGLLALALVKRNWRPLVVAVVLFALPFPLRYIQWFTPQP
                     EKTIQVSMVQGDIPQSLKWDGDQLLNTLKIYYNATAPLMGKSSLIIWPESAITDLEIN
                     QQPFLKALDGELRDKGSSLVTGIVDARLNKQNRYDTYNTIITLGKGAPYSYESADRYN
                     KNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPYIQPPLSVNGIELTAAICYEIIL
                     GEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQHFQMARMRALELARPLLRSTNNGITA
                     VIGPQGEIQAMIPQFTREVLTTNVTPTTGLTPYARTGNWPLWVLTALFGFAAVLMSLR
                     ARKR"
     gene            complement(26107..27984)
                     /locus_tag="JNZ57_000537"
     CDS             complement(26107..27984)
                     /locus_tag="JNZ57_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001276742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HAY8826862.1"
                     /translation="MSASSVKPLNVQLPAITLILFALCIGIFCYLAQWMSYEEVDQSA
                     LIHLGANVAPLTLSGEPWRLLSSIFLHSSVSHLLMNMFAFLVVGGVAEQILGKWRLLI
                     TWLFSGVFGGLISACYALRDSDQIVISVGAFGAIMGIAGAAIATQLASGAGTYHKNQR
                     RVFSLLGMVALTLLYGARQTGIDNACHIGGLIAGGALGWLSARLSGQNRLVTEGGIIV
                     AGSLLLTGAIWLAQQQMDESVLQVRQSLREAFYPQEIEQERRQKKQQLAEERNALKET
                     LSAPVSREQASGDLLAEIADIHDMAISRDGNMLYAAIENTNSIVVFDLGQKKILHTFT
                     APIAKEKSVKHCGGCKDQGVRSLALSPDEKLIYATSFEANALSVINVATGEIIQSITT
                     GAHPDSLILSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDGAGTSGKPGAWV
                     MALSPDERTLLVPGAGRGNIVRINTITHQKEDFPAGDARGTISAMRFRPENGEVIFAD
                     SQGISRISVGAQQASIMTQWCSRSVYSVEGISPDGQYLALVSYGLQGYVILLNINAGQ
                     IIGVYPASYVNHLRFSADGRKIFVMAKNGLIQMDRTRSLDPQAIIRHPQYGNVACIPE
                     P"
     gene            28439..29361
                     /gene="gltI"
                     /locus_tag="JNZ57_000538"
                     /pseudo
     CDS             28439..29361
                     /gene="gltI"
                     /locus_tag="JNZ57_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308721.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter
                     substrate-binding protein GltI"
     gene            29531..30271
                     /gene="gltJ"
                     /locus_tag="JNZ57_000539"
     CDS             29531..30271
                     /gene="gltJ"
                     /locus_tag="JNZ57_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter permease
                     GltJ"
                     /protein_id="HAY8826863.1"
                     /translation="MSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAF
                     LVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKA
                     ELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVL
                     LPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLA
                     YVLINAIIMLVMTLVERKVRLPGNMGGK"
     gene            30271..30945
                     /gene="gltK"
                     /locus_tag="JNZ57_000540"
     CDS             30271..30945
                     /gene="gltK"
                     /locus_tag="JNZ57_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter permease
                     GltK"
                     /protein_id="HAY8826864.1"
                     /translation="MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM
                     RLSSFAPVAWFAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMV
                     AFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLT
                     QGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSY
                     LKRRTA"
     gene            30945..31670
                     /gene="gltL"
                     /locus_tag="JNZ57_000541"
     CDS             30945..31670
                     /gene="gltL"
                     /locus_tag="JNZ57_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020457015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter ATP binding
                     protein GltL"
                     /protein_id="HAY8826865.1"
                     /translation="MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLI
                     KTVNGLEPVQQGEITVDGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQ
                     VKVLKRDKAPAREKALKLLERVGLSAHANKFPAQISGGQQQRVAIARALCMDPIAMLF
                     DEPTSALDPEMINEVLDVMVELANEGMTMMVGTHKMGFARKVANRVIFMDEGKIVEDS
                     PKDAFFDDPKSDRAKDFLAKILH"
     gene            31788..32723
                     /gene="rihA"
                     /locus_tag="JNZ57_000542"
     CDS             31788..32723
                     /gene="rihA"
                     /locus_tag="JNZ57_000542"
                     /EC_number="3.2.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine-specific ribonucleoside hydrolase
                     RihA"
                     /protein_id="HAY8826866.1"
                     /translation="MALPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEK
                     TLRNVLRMLTLLNRTDIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNC
                     TAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWT
                     PAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHIEDTERFRAIGNPVSTIVAE
                     LLDFFLEYHKDEKWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTVV
                     DYYYLTGNKPNATVMVDVDRQGFVDLLADRLKFYA"
     gene            32807..34477
                     /locus_tag="JNZ57_000543"
     CDS             32807..34477
                     /locus_tag="JNZ57_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HscC"
                     /protein_id="HAY8826867.1"
                     /translation="MDNAELTIGIDLGTTNSLIAVWKDGAAQLIPNKFGEYLTPSIIS
                     MDENNHILVGKPAVSRRTSHPDKTAALFKRAMGSNTNWRLGSDTFNAPELSSLVLRSL
                     KEDAEEFLQRPIKDVVISVPAYFSDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYGL
                     HTQQNTRSLVFDLGGGTFDVTVLEYATPVIEVHASAGDSFLGGEDFTHMLVDEVLKRA
                     EVARTTLNESELAALYACVEAAKCSNQSPLHIRWQYQEETRECEFYENELEDLWLPLL
                     NRLRVPIEQALRDARLKPSQIDSLVLVGGASQMPLVQRIAVRLFGKLPYQSYDPSTIV
                     ALGAAIQAACRLRSEDIEEVILTDICPYSLGVEVNRQGVSGIFSPIIERNTTVPVSRV
                     ETYSTMHPEQDSITVNVYQGENHKVKNNILVESFDVPLKKTGAYQSIDIRFSYDINGL
                     LEVDVLLEDGSVKSRVINHSPVTLSAQQIEESRTRLSALKIYPRDMLINRTFKAKLEE
                     LWARALGDEREEIGRVITDFDAALQSNDMARVDEVRRRASDYLAIEIP"
     gene            complement(34537..35988)
                     /gene="djlC"
                     /locus_tag="JNZ57_000544"
     CDS             complement(34537..35988)
                     /gene="djlC"
                     /locus_tag="JNZ57_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone DjlC"
                     /protein_id="HAY8826868.1"
                     /translation="MKTCWQILEIESTTQIDIIRQAYLARLPLCHPETDPQGFKALRQ
                     AYEEALRLAVNPVEEADDEEKDAAAEHEILRAFRTLLDSESDRFQPSAWQKFIQQLNT
                     WNMEDVDQLRWPLCAIAIEARYLSLNCASLLAERLNWHSFNDSEGMDEEEREAFLEAI
                     QAGDCFDFLSLLEYPVALQNQTVEYYFALERCCRYHPDYVTAFLAMEGPWFIPDDAKL
                     HRKLLRWYSSVQTGMAELIPVAKQWQMEEPESEDARYYLCAQRLYCGEGESLLADLCA
                     YRESYPSTQADNLLLQWSKRHCPDYFALLVMVIEAQSMVDAQSKPLKYVPGESARTRL
                     LWAEILHSGKLSPLGQSFIESLFFKRKAWAWWKSRVGSETEQDSPLLDLYRVAEQVVL
                     EAFPKQEMLARLNTRLEGGDAHPLEAIITRMLLTKVKLEPEDEDVDEPTPENHEEKND
                     EDEKPQSITSIIKISLTVLVIGYALGKIAMLFS"
     gene            complement(35985..36692)
                     /locus_tag="JNZ57_000545"
                     /pseudo
     CDS             complement(35985..36692)
                     /locus_tag="JNZ57_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415181.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
     gene            complement(36773..37843)
                     /locus_tag="JNZ57_000546"
     CDS             complement(36773..37843)
                     /locus_tag="JNZ57_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001154804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide modification protein"
                     /protein_id="HAY8826869.1"
                     /translation="MNTAHLSFECVVLLAERLRWLQEENVGEIDEEELESFLYAIAKG
                     NVFNFQTILHLPVAVQNDTIDFYQMFARIWSSHPEWLTLYLAQHRAVIIPDDAKLHRN
                     LLRWYSAGRLDIPELLDYARSWREAEPDNEDARYYEYAQRVYCGEGESLLAELCDYWR
                     EYPSTQADALILQWCRQHRVDYYPLVVMMIEARELVNDQGKQLLYVPGDSARTRFHLY
                     EILSDEKLSALGRSLVEMVLHKGRKPRISLTRDTEHLLWPLYLVAKQLVQASQPTEES
                     LMPIVSRLDAEDRCPLEALIIRRLLIQAANFTEKQTVEPEPQPQPMPVDDGGPGCLGV
                     IKIIFYIFIFAGLIGKILHLFG"
     gene            complement(37922..38200)
                     /locus_tag="JNZ57_000547"
     CDS             complement(37922..38200)
                     /locus_tag="JNZ57_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000786566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HAY8826870.1"
                     /translation="MKNCWKILDIEETTDVDIIRRAYLALLPSFHPETDPQGFKQLRQ
                     AYEEALRIAQSPAKSVWQPEEYEVAEHEILLAFRALLASDSERFLPSA"
     gene            complement(38197..>38318)
                     /locus_tag="JNZ57_000548"
     CDS             complement(38197..>38318)
                     /locus_tag="JNZ57_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
                     /protein_id="HAY8826871.1"
                     /translation="NDMFYQLFASDDAYYPTLSWQPLADYPTCPETLKDMSDL"
BASE COUNT         9473 a         9874 c         9579 g         9392 t
ORIGIN      
        1 gattgttcag gttgggcgca tgcagtcagc agtaatgtgg cggtaattag tgacactatg
       61 acgaccagac tcctgttggt cttcattggg atttccttga gctactcagt ttgttgacaa
      121 agtgttcgtt gtttttgccg gatgcggcgt gaacgcctta tccggcctac aaaatctcgt
      181 aaattcaata tattgcacca tcctcgtagg cctgataagc gtagcgcatc aggcaattct
      241 gtgtttgtca tacgtaaaaa agggcgatct tccgaccgcc ctttttctta tttaatgtgt
      301 ttacgcgttt ttcagaactt cgctaacaat ctcaaccgct tctttctcaa tctgcttgcg
      361 atgttcttca ccgaggaagc tttcgcagta gatcttatat gcgtcttccg tgcctgacgg
      421 acgcgcggcg aaccagccgt tgtcagtcat cactttcaga ccgccgatag aagcaccatt
      481 gcccggtgcc gccgtcaggc gcgcggtgat cgggtcgcct gccagggtgc tggcgctcac
      541 catttccgga gacagcttag acagcgccgc tttttgtgcg gaagtcgcag ctgcctgcaa
      601 acggttgtag ctcggcgcac caaagcgttt tgccagttcg ttgtagtgtt cctgcgggtt
      661 cttaccggtg acagcggtga tttccgccgc cagcagacac atgatgatgc cgtctttgtc
      721 ggtggaccac ggcgtgccgt cgaaacgcag gaaggaagcc cctgcgctct cttcgccgcc
      781 aaagccgaag ctgccgtcga acagaccatc aacaaaccat ttgaaaccta ccgggacttc
      841 taccagcttg cggcccaagt cattgaccac acggtcgatc atcgcagaag aaaccagcgt
      901 tttaccgaca gcaacatctt tgccccactg cggacgatgc tggaacaggt agttgatcgc
      961 caccgccagg tagtggttcg gattcatcaa acctgccgga gtgacgatac cgtgacggtc
     1021 ataatccggg tcgttagcaa acgccagatc gaacttatca cgcagtgcca gcaggcccgc
     1081 catcgcacac tcggaggagc agtccatacg gatcgcgccg tctttatcaa ggtgcataaa
     1141 gcggaaggtt tgatcgacct gatcgttaac gatggtcagg ttgaggttgt aatactcgcc
     1201 aatacgcttc cagtattcga taccggaacc gcccagcgga tcaacgccca gcgtcaggcc
     1261 cgctttctga atcgccgcca tatcaacgat atcggccaga ccttccacaa acggctgcac
     1321 cagatcctgc tctttcacat gaccggatgc catcgcttcg tcgagggaga tacgcttcac
     1381 gcctttcagg ccatcggcca gcagtgcgtt ggccctgtct tccaccactt tggtgacgtt
     1441 ggtatcagcc gggccaccat ttggcggatt gtacttgata ccaccatctt ccggcgggtt
     1501 atgggacggt gtaatcacga taccgtctgc cagcggacca ccttttttat tgtgaaccag
     1561 gatggcattg gaaacggcag gcgttggagt gaagccattg ttttcctgca caatgacatc
     1621 aacgccgttc gctgccagca cttccagtac ggaaatgaac gcaggctcgg acagggcgtg
     1681 agtatcttta cccacatagc aagggccagt gatgccgttt ttcgcacgtt cttcagcaat
     1741 tgcctgagcg atcgccagaa tgtgcggctc gttaaagctg tggcgcgctg cactgccacg
     1801 gtgaccggaa gtaccgaatt tcaccgcgtg ctccgcattc cctgcttctg gtttcagtac
     1861 ataatattgc gccgtcagtt gggcgacgtt aatcaaatca ctctgttgtg caggttggcc
     1921 tgcacgattg tggattgcca ttgctttgtc ctttgtctgc aacgttttag atagttccgc
     1981 aaaccttctc aatcaattcc gccgggaatt gcatcgactg catgatgtgt tcgatcatgc
     2041 tgcatttacg gccggtgttg gtgttggtga tcacccaata cggcgtgcct ggcacatgtt
     2101 tcggcttggt ctgattacca tttttcagca gcgtttgttc atctgccgca aagtaaacgc
     2161 gtgtacgacc gtgcaacgat tccgttgctt cggcaaacgc ctgggcgtca agagaatata
     2221 gtgtagacaa cagcagcata aagcgattga ccgctcgctt ttgctctgcg tattcgtcag
     2281 aaagcagaag ttcacgcatt gcgcgaacct tgtctttaat cgttttgacc ggcttcgctt
     2341 cgacgatagc aggtgacgca acgcgaacct ctttcgtcac cggagcagca ggctgtgatg
     2401 cggcggaaaa tttcaacata cgccgtaaaa tgtcggatgc gctctcgccg atatgcttag
     2461 tgtggctggc aatatagctg tagagttcat catcaacttc aatcgttttc atcttaatcc
     2521 agtgcagtgt cttagctgaa tacaagtcgc caagagtata tgaataaatc ccggcagcgg
     2581 atagcgtcaa gcctggcttg cagaaaaact cggaataaac cttatttgtt gcagccctgt
     2641 ggcacaatgg tcaacataat accctaacac gacaacgcga aaaaaagaac tttgccatga
     2701 aattgaatat ccgcgcgcaa actgcacaaa accagcacaa taattctccc atcgttcttg
     2761 tccatggtct gtttggtagc ctcgacaacc ttggcgtact ggctcgcgat ctggtaaacg
     2821 atcacaatat catccaggtt gatatgcgta accacggtct ttcaccgaga gatccggtaa
     2881 tgaattaccc ggcgatggcg caggatcttg ttgatactct ggatgcacag cagatcgaca
     2941 aagcaacatt tatcggtcac tccatgggcg gtaaagcggt aatggcactt acggcactgg
     3001 cccgcgatcg catcgataaa ctggtggcga tcgatatcgc accggtcgac tatcacgtac
     3061 gccgtcatga tgagattttc gcggctatca acgcggtcag tgaatcggac gcacaaactc
     3121 gccagcaagc agcagcaata atgcgccagc atcttaatga agaaggggtg attcagtttc
     3181 tgttgaaatc ttttgttgac ggggagtggc gctttaacgt gccggtattg tgggatcagt
     3241 atccgcatat tgtgggttgg gagaaaatcc cggcatggga tcaccctgcc ctgtttatcc
     3301 ctagcggcaa ttctccgtat gttagcgagc agtaccgtga tgatttactg gcacaatttc
     3361 cacaggcacg ggcgcatgtg attgcaggcg cgggtcactg ggtccatgct gaaaaaccgg
     3421 atgcggtatt acgcgctatc cgtcgctatc tcaatgatta acgcaactga ttaaaaaccc
     3481 agcgtccgcg tcgctttccg cgcgtgggcg ttggcgtgac tcatcgcgct gatgtattat
     3541 ggcgcgctat ccatccgggc agaggcctgg ctgattgttt cccccgaagt caccaagatc
     3601 atggccaaag aacaaacgga ccgtacgaca ttagatctgt tcgcgcacga gcgtcgaccg
     3661 ggacgaccga aaactaatcc gctttcgcgc gatgaacagc tgcgtattaa taaacgcaac
     3721 cagctaaaac gcgacaaagt acgtggcctt aagcgtgtcg aactgaagct gaacgcggaa
     3781 gctgtcgagg cgctgaacga gctggcggag tcgcgcaata tgagccgtag cgaactgatc
     3841 gaagagatgt taatgcagca actggcggcg ctgcgtagtc agggcatcgt ttaaatttcc
     3901 actttcatgt agcacagtgt gcagtcctgc tcgtttgctg attccgcaag actgcctgtt
     3961 ctgctatgat tgcctttatc cgtgggcaat ttcccccccc catttcaata agtttcaaga
     4021 ggttatttca ctcatggcta tcactggcat ctttttcggc agcgacaccg gtaataccga
     4081 aaatatcgca aaaatgattc aaaaacagct tggtaaagac gttgccgatg tccatgacat
     4141 tgcaaaaagc agcaaagaag atctggaagc ttatgacatt ctgctgctgg gcatcccaac
     4201 ctggtattat ggcgaagcgc agtgtgactg ggatgacttc ttcccgactc tcgaagagat
     4261 tgatttcaac ggcaaactgg ttgcgctgtt tggttgtggt gaccaggaag attacgccga
     4321 atatttctgc gacgcattgg gcaccatccg cgacatcatt gaaccgcgcg gtgcaacgat
     4381 cgttggtcac tggccaactg cgggctatca tttcgaagca tcaaaaggtc tggctgatga
     4441 cgaccacttt gtcggtctgg ctatcgacga agaccgtcag ccggaactga ccgctgaacg
     4501 tgtagaaaaa tgggttaaac agatttctga agagttgcat ctcgacgaaa ttctcaatgc
     4561 ctgatgtgat gcggcgtaga ctcatgtcta cgccgtatta atagataatg ccaatcaaaa
     4621 taattgctac aaatttgtaa cttttgctgt tgtacctgta caatgtcccg gtgttcaagt
     4681 ggccttgccg ttgtaaatgt aagctgtgcc acgtttttat taacaatatt tgccagggac
     4741 ttgtggtttt catttaggcg tggcaattct ataatgatac gcattatctc aagagcaaat
     4801 tctgtcactt cttctaatga agtgaaccgc ttagtaacag gacagattcc gcatgactga
     4861 taacaatacc gccctaaaga aagctggcct gaaagtaacg cttcctcgtt taaaaatcct
     4921 ggaagttctt caggagccgg acaaccatca cgtcagtgcg gaagatttat acaaacgtct
     4981 gatcgatatg ggtgaagaaa ttggtctggc tacggtatat cgcgtactga accagtttga
     5041 cgacgctggt atcgtcaccc gccacaattt tgaaggcggt aaatccgtat ttgaactgac
     5101 acagcaacat caccacgatc acctgatctg cctcgactgc ggcaaggtta tcgaatttag
     5161 tgatgattcc atcgaagcgc gtcagcgtga aattgccgca aaacatggca ttcgcctgac
     5221 taaccacagt ctctatcttt acggtcactg tgccgaaggc gattgccgcg aagatgaaca
     5281 tgcgcacgaa ggcaaataag ccagcctgaa tgagaaaaag ccaacctgcg ggttggcttt
     5341 tttatgcaag ggaaataaga aaagcgagag ttacagctct cacttatttg ttattactgc
     5401 gaatttcctg ccaaacttta tcacaatcgg ctttcaccgc ctgatcattt ccggtttgcg
     5461 ttgcacgcag acactgctga taatccagta cgcggacact ttcctggtcg gcaaaatgct
     5521 gatgttgttt ctctttcttc agcacgttta acacgctctg gcaggcttca attttttctg
     5581 gcgaaccttg tgcggtgttg atacaggcgc tgtatgcctc tttcagacga ctgtcttcct
     5641 gtggcgcggt tgattgcgca caagctacca gccccgatgc cattatggcg atgagaatca
     5701 gttttttcat agcaaattcc tcaaacgtgc ggcaggcaca aaacctgccg cgtcgggcat
     5761 cagaagatgg tgaatggtgc gattaccata aatttcacgt cacgctcatc ctggaagatg
     5821 ttgccgtaac caccgcccca gcttgggatg tcggagtggt tgtcgtattc ggtgaagtgc
     5881 agtttgaaca tcgtgccttt ggcgcgaccg tcctgaatgg tgtagaccgc atccaggctg
     5941 tatgcagact cttcaatagt ccggtttttg tcgtagtacg catccggatt gctctgccag
     6001 gtcgcaggtt tagcatccca tgcgtaaacg taggaagcgc cgatggcgaa gcctggaaga
     6061 ttccagtttt tcaggtcata catcgcaccg aagaagaccg ctttttcgcc gttagcgttg
     6121 aagtcggaac ggttatccca ccagatatcc aggcggccgt tggaggaagc gtaggttgga
     6181 gtcatacgtt gcaggaagta tccctgctga ccgtcagcct taacccaggt gccttcgagg
     6241 cgcaaatcca ctacgtcagc cgcccggtaa ccaaaggtca acgcttgcag ccaggcggtg
     6301 ccgtcataaa ggtcgttgac gctgcgatcg tcaactttat cgcgcgtacc atagaactgg
     6361 tagctggtgg ttaacgggct accggcgata tcaaatttgt agctggcttt ggcaaaatat
     6421 tgatcgatat acccttccgc ctgaccaaat gccgcttcca gtacgaagtt atttttgaag
     6481 tcgtatttcg ccccaaggga gtgcagataa tcaactttgg tggttttatc gttctgataa
     6541 aactcatcca tttccagatg ccacggcgct ttgtattcgt tggtccacat gtaggagaaa
     6601 ctcaacgcac cagcatcgcc gtaatcaaaa ttcgccccgg cttccgcccc ctgataagta
     6661 cctggcataa agctccagtg cggcgctaac agcgtttgac cagttggctg aatgtaacct
     6721 gccctcgccc aaaccggacc gtatttaaat ttggccgcag ctttatacag gcttataccg
     6781 cttttgtcgc cggaccagtc ttcgtcatag gctttattac tttttgaaaa cgcgatttcg
     6841 ttcgggtggg agctgtcgcc gttttccgcc atttcaatcg ccgtaaacac agcaatatca
     6901 aggccgaaca tatcagcagc ataaccggac tgaaaatcga ggttggcatt ccaggtggag
     6961 tgagaaaggt tggttttgta tttgtcgccg tcggtaacat ctttacggtc gcgttcacgc
     7021 tgccagtaat atataccgcc ggttaaggtt gaatcgtcga tgaatccttc ggcgcgagcc
     7081 tccggcattg ccataaagcc cgacattgct gtaacaccgg cgatagccag cgccagcgta
     7141 ctacgtttgc cactaaacgt acgcatgggt taatcctctt tgacgtataa attgctgcac
     7201 caaaggtgaa cagcgaaaaa aataaaaatt aaaaaagtag cattgagaaa agtctcgctg
     7261 actacaggaa tagactattt ttcgcgacgc gaattatcaa tctctttctg taaccagaat
     7321 gtaagaacat gagcaaccgc acatattttg atgatttttg ttacaaggct taagtttgcg
     7381 gttgaaaggc ttgcagaaga ataaaagcgt aaatttccag caagatgaaa gcggttacat
     7441 tttatttaat tatggtttgt gattttaaat ttattttatg gataaattgc gaagcggaat
     7501 taattcgcga agaaaagcag aaaaaacgcc gcagagtacg gcgtttggga ttgtttgcta
     7561 tttcttgccg gatgcgacgt aaatgcctca cccggcctgg tagaacttaa aattactcgc
     7621 ctactttcgc ccaggtatca cgcagcccaa cggtgcggtt aaataccggt ttttccgctg
     7681 tggaatggcg gctgtcgagg cagaagtaac cttcacgctc aaactggaat gctttacccg
     7741 caaccgcatc tttcagcgac ggttcagcaa agccctgttt gatcaccagc gattccgggt
     7801 taatcaccga caggaaatca tccgcagcac ctgggttagg cacgctgaac agacggtcgt
     7861 acagacggat ttcaaccggc agcgcatgtg ccgcgctcac ccagtgaata acacctttga
     7921 ctttacgacc atctgccgga tctttgctta aggtgtcggc gtcataagta cagaagatgg
     7981 tggtgatatt gccttcggca tctttctcca cgcgttctgc cttaatgacg taagcattac
     8041 gcagacgcac ttctttaccc agcaccagac gtttgtactg cttgttagct tcttcgcgga
     8101 aatcggcgcg atcgatccaa atctcaccgc taaacggcac ctggcggcta cccatttccg
     8161 gtttgttcgg atggttcggc atggtaacca tttcgccttc gccctgatag ttttcgataa
     8221 ccagtttcac cggatcgata accgccattg cgcgcggggc gttttcgttg agatcttcac
     8281 ggatgcagga ttccagcgac gccatctcaa tggtgttgtc ctgcttggtc acgccgatgc
     8341 gtttgcagaa ctcacgaata gaagcagcag tgtaaccacg acgacgcaga ccggaaatgg
     8401 tcggcatacg cgggtcatcc cagccttcaa cgtgcttgtc ggtcaccagc aggttcagct
     8461 tacgcttgga catcacagtg tattccagat tcaggcgcga gaattcgtac tggcgcgggt
     8521 gaacaggaat ggtgatgttg tccagcaccc agtcgtacag gcgacggttg tcctggaact
     8581 caagcgtaca cagagagtgc gtaatacctt ccagggcatc gctgatgcag tgggtgaagt
     8641 cgtacatcgg gtagatgcac cacttgttgc cagtctggtg gtgttcagca aatttaatgc
     8701 ggtacagcac cggatcgcgc atcacgataa acggtgaagc catgtcgatt ttcgcacgca
     8761 ggcaggcttt accttcttca aaaccaccgg cacgcatttt ttcgaacagc gccaggttct
     8821 cttcaacgct gcggtcgcgg tacgggctgt ttttacccgg ttgcgtcagg gtgccgcggt
     8881 attcgcggat ctgttccggc gtcagttcat caacgtacgc caggccttta ttgatcagtt
     8941 cgatcgcata ggcgtggagc tgatcaaaat aatcggagga gtaacggacg ttaccagacc
     9001 agtgaaaacc taaccactct acgtcgtttt tgatcgactc aacatactcg atatcttctt
     9061 ttaccgggtt agtgtcgtcg aaacgcaggt tgcactggcc tttatagtcc tgggcgatcc
     9121 cgaagttcag gcagatagat ttcgcatggc caatatgcag atagccattc ggctccggcg
     9181 ggaaacgggt gtgtactgtg gtgtgcttac cactggccag atcttcatcg atgatctgac
     9241 ggataaagtt agtcgggcgg gcttctgcct cactcatcgt ggattcctca aagcgtaaac
     9301 aacgtataac ggcgtatgat cttataagcg ggacaggctg acaactgtta gttttttaaa
     9361 attgataatc taacaaggat tatggggatg attgatgaaa aaaaaagcgg cagagaagat
     9421 ctccaccgct tgtcattgtt ggatgcgacg ctcaagcgtc gcatcaggca taaagcagat
     9481 tactttttga tttcatacag cggtgtttga cccgccacaa catggccctg agctttaatg
     9541 atcaagccac tgaaatcgtc gatattgctg caaaccaccg ggctaatcat cgagcgggcg
     9601 ttagcgttca ggtaatccag atccatttcc agaatcggtt gccctgcgct tacctgcgca
     9661 ccctcttcca ccagacgttt aaagccttta ccttccagcg ctacggtgtc gatacccata
     9721 tggacgacga tctccgcgcc tttttcggtt tccaggcaga acgcgtggtt ggtgttgaag
     9781 attttcacga ttgtccctgc ggctggtgat acgacgattt tatctgtcgg tttcaccgcc
     9841 acaccgtcac ccaccgcttt gctggcgaat gcttcgtcag gaacctgatc cagtgccacg
     9901 acatcaccgg taatcggcga taccagctcc gcgatagata ccgcgtttgg tacagcctgc
     9961 ggttttgcta caggcgcggc agttgacgga gttgcttcag ctgacgcagc ggctaccgga
    10021 ccacgggcaa cgactttctt catcgcatcg ccgatggatt ctgctttcgc gccaacaatc
    10081 acctgaatag tctgtttgtt cagtttcact acaccagaag cacccagacg tttacacatc
    10141 gtatcgttga cgcgggcaga gtcagccacg gtcaggcgca gacgggtgat acaggcgtca
    10201 attgctttca ggttgtcagt gccaccaacc gcagcaatat agttggtcgc cagttgattg
    10261 aggccttctt cagtgttgct gttggcttct tcagtaacga tctcgtcttc tttatcttca
    10321 cgacccggcg ttttcaggtt gaacatgcgg ataaccaaac tgaacaccac gaagtagata
    10381 gcgaagaaga caacacccat caccagcagc atccagacgt tctggctggc ggccggcaga
    10441 ttatacatca acgcgtagtc gatagccccc gcagagaaag agaagccagc atggataccc
    10501 agcagtgttg ccacaaacag gctgataccg gtcagcagtg cgtgcaggag gtacagcagc
    10561 ggtgcaagga acatgaacag gaattccagc ggctcagtca caccggtcag gaacgcagta
    10621 acagcaacag aaagcagcat cccgccaacc atcggacgac gctctttcgg tgctgcgaag
    10681 tacatcgcca gcgccgcacc cggcagaccg aacatcataa tcgggaagaa gccggacatg
    10741 aacatccccg cggtgccgtc accggcatag aagcggttga tatcaccgtg gaaaaccgta
    10801 cccgccgcgt tggtgaattc accaatctgg aaccaggcga tggtgttcag cacctgatgc
    10861 agaccggttg ggatcagcag acggttgatg aaaccaaaga taccggaacc cagcgcgccc
    10921 gcagaaacga tccactcgcc tcctgcatgg atagcgtgct gtaccggcgg ccagacgtaa
    10981 ccaaaaatgg ccgccagcac caggcagaag aagccggtgg caatcggcac aaagcgtttg
    11041 ccgccgaaga agctcaggaa gtccggcagt ttaatatcgg accaacggtt ataggctgcg
    11101 ccaccaacca gaccggtaat gatacccgcc agtacaccca tgtttatttc tgggttgatg
    11161 gtcaccatcg ctttggttaa cacaaagtaa cctaccgcac ccgccagcgc cgccgcacct
    11221 gcgctgtctt tcgaccagct ggatgccaca ccgatggcga agattaatgc gaggttatca
    11281 aaaatcgcac cgcccgcctg ggcaataaac gcaacgttaa gtaaatctgg ctgaccgaat
    11341 cgcagcaaca gtgccgccac cggcagcacc gcgataggga gctgtaacgc cctaccgagt
    11401 cgctggaaaa aacctaaaat attcatctta ttccccctac gagaacccta tttggctcgt
    11461 ttaaagccgt atttttattt tgctgcaaat tgtactgccg atgttctgta atcagattgt
    11521 tagatcatct gctacagagt gtgtgaaaat ttaattcgta tcgcaaatta aacgcgtgtc
    11581 ttttgtgagt tttgtcacca aatatcgtta tcatcactcc cttttactgg ctaaaccaga
    11641 aaacttattt tatcattcaa aaaaatcagg tcggattgac gcctgtctgc gcaaatccag
    11701 gttacgctta aagatgccta atccgccaac ggcttacatt ttacttattg aggtgaataa
    11761 tgagactgat ccccctgact accgctgaac aggtcggcaa atgggctgct cgccatatcg
    11821 tcaatcgtat caatgcgttc aaaccgactg ccgatcgtcc gtttgttctg ggcctgccaa
    11881 ctggcggcac gccgatgacc acctataaag cgttagtcga aatgcataaa gcaggccagg
    11941 tcagctttaa gcacgttgtc accttcaaca tggacgaata tgtcggtctg ccgaaagagc
    12001 atccggaaag ctactacagc tttatgcacc gtaatttctt cgatcacgtt gatattccag
    12061 cagaaaacat caaccttctc aacggcaacg ccccggatat cgacgccgaa tgccgccagt
    12121 atgaagaaaa aatccgttct tacggaaaaa ttcatctgtt tatgggcggt gtaggtaacg
    12181 acggccatat tgcatttaac gaaccggcgt cttctctggc ttctcgtact cgtatcaaaa
    12241 ccctgactca tgacactcgc gtcgcgaact ctcgtttctt tgataacgat gtcaatcagg
    12301 tgccaaaata tgccctgact gtcggtgttg gtacattgct ggatgccgaa gaagtgatga
    12361 ttctggtgct gggtagccag aaagcactgg cactgcaggc tgcagttgaa ggttgcgtga
    12421 accacatgtg gaccatcagc tgtctgcaac tgcatccaaa agcgatcatg gtgtgcgatg
    12481 aaccttccac catggagctg aaagttaaga ctttaagata tttcaatgaa ttagaagcag
    12541 aaaatatcaa aggtctgtaa ttgttatccc tgccctggct ccttgctcag ggcaatattt
    12601 tttaaaatcg ggggtcagaa tgtatgcatt aacccagggc cggatcttta ccggccacga
    12661 atttcttgat gaccacgcgg ttgttatcgc tgatggcctg attaaaagcg tctgtccggt
    12721 agcggaactg ccgccagaga tcgaacaacg ttcactgaac ggggccattc tctcccccgg
    12781 ttttatcgat gtgcagttaa acggctgcgg cggcgtacag tttaacgaca ccgctgaagc
    12841 ggtcagcgtg gaaacgctgg aaatcatgca gaaagccaat gagaaatcag gctgtactaa
    12901 ctatctgccg acgcttatca ccaccagcga tgagctgatg aaacagggcg tgcgcgttat
    12961 gcgcgagtac ctggcaagac atccgaatca ggcgttaggt ctgcatctgg aaggtccgtg
    13021 gctgaatctg gtaaaaaaag gcacccataa tccgaatttt gtgcgtaagc ctgatgccgc
    13081 gctggtcgat ttcctgtgtg aaaacgccga cgtcattacc aaagtgaccc tggcaccgga
    13141 aatggttcct gcggaagtca tcagcaaact ggcaaatgcc gggattgtgg tttctgccgg
    13201 tcactccaac gcgacgttga aagaagcgaa agccggtttc cgcgcgggga ttacctttgc
    13261 cacccatctg tacaacgcga tgccgtatat taccggtcgt gaaccgggcc tggcgggcgc
    13321 gatcctcgac gaagctgaca tttattgcgg tattatcgct gatggcctgc atgttgatta
    13381 cgccaacatt cgtaacgcta aacgccttaa aggcgacaaa ctgtgtctgg ttaccgacgc
    13441 caccgcgcca gcaggtgcca acattgaaca gttcattttt gcgggtaaaa caatatacta
    13501 ccgtaacgga ctttgtgtgg atgagaacgg tacgttaagc ggttcatcct taaccatgat
    13561 tgaaggcgtg cgtaatctgg tcgaacattg cggtatcgca ctggatgaag tgctgcgtat
    13621 ggcgacgctc tatccggcgc gtgcgattgg cgttgagaaa cgtctcggca cactcgccgc
    13681 aggtaaagta gccaacctga ccgcattcac acctgatttt aaaatcacca agaccatcgt
    13741 taacggtaac gaggtcgtaa ctcaataaga gaaagtatga caccaggcgg acaagctcag
    13801 ataggtaatg ttgatctcgt aaaacagctt aacagcgcgg cggtttatcg cctgattgac
    13861 cagtacgggc caatctcgcg gattcagatt gccgagcaaa gccagcttgc ccccgccagc
    13921 gtaaccaaaa ttacgcgtca gcttatcgaa cgcgggctga tcaaagaagt tgatcagcag
    13981 gcctccaccg ggggccgccg cgctatctcc atcgtcaccg aaacccgcaa tttccacgca
    14041 atcggcgtac ggcttggtcg tcacgacgcc accatcaccc tgtttgatct cagcagcaaa
    14101 gtgctggcag aagaacatta cccgctgccg gaacgtaccc agcaaacgct ggaacatgcc
    14161 ctgttgaatg ccattgctca gtttattgat agctaccagc gcaaactgcg cgagctgatc
    14221 gcgatttcgg tgatcctgcc agggcttgtt gacccggaca gcggcaaaat tcattacatg
    14281 ccgcatattc aggtagaaaa ctgggggctg gtagaagctc tggaagaacg ttttaaagtg
    14341 acctgtttcg ttggtcacga tatccgtagt ctggcgctgg cggagcacta cttcggtgca
    14401 agtcaggatt gcgaagactc cattctggtg cgtgtccatc gcggaaccgg ggccgggatt
    14461 atctctaacg ggcgcatttt tattggccgc aacggtaacg tcggtgaaat tggccatatt
    14521 caggtcgaac cgctgggtga acgctgccac tgcggcaact ttggctgcct ggaaactatc
    14581 gccgccaacg ctgccattga acaacgggtg ttgaatctgt taaagcaggg ctaccagagc
    14641 cgcgtgccgc tggacgactg caccatcaaa actatctgca aagccgcgaa caaaggcgat
    14701 agtctggcgt cggaagtaat tgagtatgtc ggtcgtcatc tgggtaaaac catcgccatt
    14761 gctatcaact tatttaatcc gcaaaaaatt gttattgccg gtgaaatcac cgaagccgat
    14821 aaagtgctgc tccctgctat tgaaagctgc attaataccc aggcgctgaa ggcgtttcgc
    14881 actaatctgc cggtggtacg ttctgagctg gatcaccgct cggcaatcgg cgcttttgcg
    14941 ctggtaaaac gcgccatgct caacggtatt ttgctccagc atttgctgga aaattaatgt
    15001 gcttttatag tggcgcttat tgttgtcaat attctgggta gtccatgacc attaaaaatg
    15061 taatttgcga tatcgacggc gtgctgatgc acgataacgt cgccgtaccg ggtgcagcgg
    15121 aatttttgca cgggattatg gataaaggcc tgccgctggt gttgctgacc aactatcctt
    15181 cgcagactgg gcaagatctg gcgaaccgct ttgccaccgc aggtgtcgat gtacctgaca
    15241 gcgtgtttta tacctctgcg atggcgactg ccgatttcct gcgtcgccag gaaggcaaga
    15301 aagcgtatgt ggtgggcgaa ggcgcactga ttcatgaact gtacaaagcc ggtttcacta
    15361 ttaccgatgt gaaccctgat ttcgtgattg ttggcgaaac gcgttcctac aactgggaca
    15421 tgatgcataa agcagcctat ttcgtcgcta acggtgcacg ttttatcgcc accaatccgg
    15481 acacccacgg gcgcggtttt tatcccgcgt gtggcgcgtt gtgtgcaggc atcgaaaaaa
    15541 tctccgggcg taaaccgttc tatgttggta aaccgagtcc gtggatcatc cgcgcggcat
    15601 taaacaaaat gcaggcgcat tcggaagaaa cggtgattgt cggcgataac ctgcgtaccg
    15661 atattctggc gggcttccag gcaggtctgg aaacgattct ggtgctttct ggtgtttcat
    15721 cgctcgacga tatcgacagt atgccgttcc gcccaagctg gatttacccg tcggtcgcta
    15781 aaatcgacgt tatctgaata gcaaccacgt ccgcggacgt ggttggctct gatgacaaac
    15841 gccaaactgc ctgatgcgct acgcttatca ggcctacgca gctcctgcaa tatattgaat
    15901 tttcatgctt ttgtaggccg gataaggcgt tcacgccgca tccggcatga acaaattgca
    15961 ctttgtcagc aatttggccc ccgtaaaata taaacattca ataaaacccg ctaaaaatta
    16021 tcgattcatc aataaatata tcctcacacc agaccttttt tcaccaatcg acaatcacca
    16081 ttacgttttt tattttttca ccgccaaatc gcttgcgcac agtgctgctt tgcggcattt
    16141 ttttaaacaa gcaaacacaa caagcaacaa ataccaggtt aacggagaag gttatgtgtt
    16201 caatttttgg cgtattcgat atcaaaacag acgcagttga gctgcgtaag aaagcactcg
    16261 agctgtcacg cctgatgcgt catcgtggcc cggactggtc cggtatttat gccagcgata
    16321 acgccattct cgctcacgaa cgtctgtcaa ttgttgacgt taacgcgggg gcgcaacctc
    16381 tctacaacca acaaaaaacc cacgtactgg cggtaaacgg tgaaatctac aaccaccagg
    16441 cattgcgcgc tgaatatggc gatcgttatc agttccagac agggtctgac tgtgaagtga
    16501 tcctcgcgct gtatcaggaa aaagggccgg aatttctcga cgacttgcag ggcatgtttg
    16561 cctttgccct gtacgacagc gaaaaagatg cctacctgat tggtcgcgac catctgggga
    16621 tcatcccact gtatatgggc tatgacgaac acggtcagct gtatgtgacc tcagaaatga
    16681 aatcgctggt gccagtttgc cgcacgatta aagagttccc ggcggggagc tatttgtgga
    16741 gccaggacgg cgaaatccgt tcttattatc atcgcgactg gttcgacttt gatgcagtga
    16801 aagataacgt gaccgacaaa aacgagctgc gtcaggctct ggaagattcc gttaaaagcc
    16861 atctgatgtc tgatgtgcct tacggtgtgc tgctttctgg tggtctggat tcctcaatta
    16921 tttccgctat caccaagaaa tacgcagccc gtcgcgtgga agatcaggaa cgctctgaag
    16981 cctggtggcc gcagttacac tcctttgctg taggtctgcc gggttcaccg gatcttaaag
    17041 cagcccagga agtggcaaac catctgggca cggtgcatca cgaaattcac ttcactgtac
    17101 aggaaggtct ggatgccatc cgcgacgtga tttaccacat cgaaacttat gatgtgacca
    17161 ctattcgcgc ttcaacaccg atgtatttaa tgtcgcgtaa gatcaaggcg atgggcatta
    17221 aaatggtgct gtccggtgaa ggttctgatg aagtgtttgg cggttatctt tacttccata
    17281 aagcgcccaa cgctaaagaa ctgcatgaag agacggtgcg taaactgctg gccctgcata
    17341 tgtatgactg cgcgcgcgcc aacaaagcga tgtcagcctg gggcgtggaa gcacgcgttc
    17401 cgttcctcga caaaaaattc cttgatgtgg cgatgcgcat taacccgcag gataaaatgt
    17461 gcggtaacgg caaaatggaa aaacacatcc tgcgtgaatg ttttgagtca tacctgcccg
    17521 caagcgtggc ctggcggcag aaagagcagt tctccgatgg cgtcggttac agttggatcg
    17581 acaccctgaa agaagtggcg gcgcagcagg tttctaatca gcaactggaa actgcccgct
    17641 tccgcttccc gtacaacacg ccaacctcaa aagaagcgta tctgtaccgg gagatctttg
    17701 aagaactgtt cccgcttccg agcgccgctg agtgcgtgcc tggcggtcct tccgtcgcgt
    17761 gttcttccgc taaagcgatc gaatgggatg aagcgttcaa gaaaatggac gatccatctg
    17821 gtcgtgcggt tggtgttcac cagtcggcat ataagtaaga aatgcgaaac agccccggtg
    17881 aaatccgggg ctgtttcagt tattgaggtg cttgttgatt ctgatatgca gtaaggaaat
    17941 gttccgggtt tgccacatca ctgtttgaca actcatcact gtaggccagt atttcataga
    18001 ttaatttccc accactattg ttgaattccg aatttcatcc tgtacgacaa aagaatggct
    18061 gtagggtggg gaaaaaacac aaagtaaaca ataattgacg aatatagcgc cacgctgttc
    18121 gcaacctaac caaacagtca ctttcgagca attttccttg aaaaagaggt tgacgctgca
    18181 aggctctata cgcataatgc gccccgcaac gccgataagg tatcgcgaaa aaaaagatgg
    18241 ctacgtagct cagttggtta gagcacatca ctcataatga tggggtcaca ggttcgaatc
    18301 ccgtcgtagc caccatcttt tttgcgggag tggcgaaatt ggtagacgca ccagatttag
    18361 gttctggcgc cgcaaggtgt gcgagttcaa gtctcgcctc ccgcaccatt caccagaaag
    18421 cgttgtacgg atggggtatc gccaagcggt aaggcaccgg tttttgatac cggcattccc
    18481 tggttcgaat ccaggtaccc cagccatctt cttcgagtaa gcggttcacc gcccggttat
    18541 tggggtatcg ccaagcggta aggcaccggt ttttgatacc ggcattccct ggttcgaatc
    18601 caggtacccc agccatcgaa gaaacaatct ggctacgtag ctcagttggt tagagcacat
    18661 cactcataat gatggggtca caggttcgaa tcccgtcgta gccaccaaat tctgaatgtg
    18721 tcgaatacgt tcggcaaatt caaaaaccaa tttgttgggg tatcgccaag cggtaaggca
    18781 ccggattctg attccggcat tccgaggttc gaaccctcgt accccagcca atttattcaa
    18841 gacgcttaca tcgtaagtgc acccagttgg ggtatcgcca agcggtaagg caccggattc
    18901 tgattccggc attccgaggt tcgaatcctc gtaccccagc cacattaaaa aagctcgctt
    18961 cggcgagctt tttgcttttc tgcgttcatt caatgtcgaa tgcgatgttg acacgtctta
    19021 tccttcaatg tcggatgcga cgctgccgcg tcttatccga cctacggttg gcacgcatcc
    19081 ggcaatgttg taaggctaca accctaacgc atatttcagc gcctgacgtt tcaacacgcc
    19141 agcacgctct gccgccatta acccgagatt acgcacaaaa cgcagcggcg gcagattatt
    19201 actgaatccg gcataaaaca gatccatacc actttgcata atgaagttat ccgccatgcg
    19261 ccgcatctgg taacgcttga ggacaggata actggcccac gcttcaccgt aactgcgggc
    19321 attcaccaga acatcaatca gggcatcgac atcacgataa ccaagattca ccccctgccc
    19381 cgccagcgga tggatggtat gcgcggcatc gcccaccagc gcaagccccg gctgcacata
    19441 ctgcaacgca tgtcggcgcg tcagcggaaa cgcaccagcg gcaagcggtg taacgtaacc
    19501 cagacgcgac gggaaatgct tcgcgatttc cgcctggagt tgcgccatat tcatattctg
    19561 caactggcga atacgcgccg gagagtcata ccacaccagc gatgcccagt tatcaaacaa
    19621 cggcagaaac gcacgcggtc cgtccggggt aaattgctgc caggtgctgt cgccgggatc
    19681 gttctcacac tgtacgctaa tcaacatgca cgactgcgca tactgccagg catgaacgcc
    19741 aattcccgcc atctgccgca cctgagaatt tgcgccgtcg gcaccaatca ccagtttcgc
    19801 gcggatcgtt tcaccgccct tcagttccag ctcctgaaga tcattatctc gatgtaatgc
    19861 aatcagcgag cctggcacac gtaacgttac tttcggatgc gcttccagcg cctgccacag
    19921 cgcctgttgc aggacggtgt tttccaccat atagccaagc aacggtagct taagttcagc
    19981 ggcgtcaaac accacatgcg ccgtttccca ctcccacgtt tccagtctgc ggtaaggatg
    20041 gcaacgcata gcctgtactg catcccagac ccctaaccct ttaagcaatg ataccgatgc
    20101 ggcgctgatc gccgagatcc gcacgtccgg ttggctatca gcgacaaacg gtgcaggttc
    20161 tgcgtgctcg atcaccgtta ccgaaaatcc gtgctgtgcc agccccagcg ccagcgcgcc
    20221 gccgaccatt cctccgccga caatggcaat ttccgttggt tgatttgtca tggtcaatca
    20281 tcctgttagc aatatgcttt aagtttacag gatttttacc cccaagggct gataacgctc
    20341 atactggcca caacggcagc aaagcattac actatgcgcc ctgcattcct ggctactatt
    20401 tcgcaagagc aagtcgatga ccaaaaaact ccatattaaa acctggggct gtcagatgaa
    20461 cgagtacgat tcatcgaaga tggccgatct gctggatgcc acccacggct atcaactgac
    20521 cgacgtggcg gaagaagcgg atgtgctgct gctgaacacc tgctcaatcc gcgagaaggc
    20581 tcaggaaaaa gtcttccatc agttgggtcg ctggaaactg ttaaaagaga agaatccaga
    20641 cctgattatc ggcgtcggtg gctgcgtggc atcgcaagaa ggcgagcaca ttcgccagcg
    20701 cgcccactat gtcgatatta tttttgggcc gcaaacgctg caccgtctgc cggagatgat
    20761 caactccgtg cgcggcgacc gcagcccggt tgtagatatc agcttcccgg aaatcgagaa
    20821 gtttgaccgt ctaccggaac cgcgcgccga agggccgacc gcgtttgtct ccatcatgga
    20881 aggctgcaat aaatattgca cctactgcgt ggtgccttac acccgtggtg aagaggtaag
    20941 ccgtccgtct gacgatattc tgtttgagat tgcccagctt gcggctcagg gcgtgcgtga
    21001 agtcaacctg ctcggtcaga acgtgaacgc ctggcgtggt gaaaactacg acggctccac
    21061 cggatcgttt gccgatctgc tgcgtctggt tgctgcgatc gacgggatcg atcgtattcg
    21121 ctttaccacc agccatccga tcgaattcac cgacgatatc atcgaagtgt atcgcgacac
    21181 gccggagctg gtgagcttcc tgcatctgcc ggtacagagc ggttccgatc gcattctgaa
    21241 cctgatgggc cgtactcata cggcactgga gtacaaagcg atcatccgta aactgcgtgc
    21301 ggcgcgtcca gatattcaga tcagttctga tttcatcgtt ggcttccctg gcgaaaccac
    21361 cgaagacttc gagaaaacga tgaagctgat tgccgacgtc aatttcgaca tgagctacag
    21421 ctttatcttc tctgcacgtc cgggtacacc agccgccgat atggttgatg atgttccgga
    21481 agaagagaag aagcagcgtc tgtatattct gcaagaacgt atcaatcagc aagcgatggc
    21541 atggagccgc cggatgctcg gcaccaccca gcgtattctg gtagaaggga cttcgcgtaa
    21601 gagcatcatg gagctttccg ggcgtaccga aaataaccgc gtggtcaact tcgagggcac
    21661 accggatatg atcggtaaat tcgtcgatgt agaaattacc gacgtctacc cgaactctct
    21721 gcgcggtaaa gtggtgcgta ctgaagatga aatgggcctg cgcgtggcag aaacaccgga
    21781 atcggtgatt gcccgtaccc gcaaagaaaa cgaccttggc gtgggttatt atcagccgta
    21841 attctcaggc ccgccgttcc ggtgggcctt gttttttctc tctttatccc catctttatc
    21901 gcaatgcttg cgcctttttc ctgtggcgtg aataatttcc ttataggccg gtgaatgttc
    21961 agcttccggc ggcatacaga taagaggaac ggtttgaaca tagacactcg cgaaatcacc
    22021 ctggagccag cagacaacgc gcgtctgttg agcctgtgcg gcccgtttga tgacaacatc
    22081 aagcagctcg aacgccgtct cggcatcgag atcaatcgcc gcgacaacca ctttaaactg
    22141 accggccgtc cgatttgcgt caccgctgcg gcagacattc tgcgtagcct gtatgtcgat
    22201 acagccccga tgcgcggtca gattcaggat atcgaaccgg aacagatcca ccttacgatt
    22261 aaagaagcgc gagtactgga gcaaagtgcg gagagcgtgc cggagtacgg caaagcggtc
    22321 aatatcaaaa ccaaacgcgg cgtaattaag ccgcgcacgc caaaccaggc gcagtacatc
    22381 gccaatattc tcgaccatga cattaccttc ggcgttggcc cggcgggtac gggtaaaacc
    22441 tacctggcag tggctgcggc agttgatgcc ctggagcgtc aggagattcg ccgtattctg
    22501 ctgactcgtc cggcggtcga agccggtgag aaactgggct tcctgcctgg cgatttaagc
    22561 cagaaagtag acccgtatct gcgcccactg tacgacgcgc tgtttgaaat gctgggcttt
    22621 gagaaagttg agaaactgat tgagcgcaac gttattgaag tcgcgccgct ggcctatatg
    22681 cgtggtcgta cgctgaacga cgcgtttatc attctcgatg agagccagaa caccaccatc
    22741 gaacagatga agatgttcct gacccgtatc ggttttaact caaaagcggt tatcaccggc
    22801 gacgtcacac agatcgacct gccgcgtaat actaaatcag gcttacgtca cgccatcgaa
    22861 gtactggccg atgtcgaaga gatcagcttt aacttcttcc acagcgaaga cgtggttcgt
    22921 caccctgtgg tggcgcgtat cgttaacgcc tatgaagcct gggaagaagc cgaacaaaaa
    22981 cgaaaagcgg cgctggcggc agaacgcaag cgcgaagaac aggaacaaaa atgagtcagg
    23041 tgatcctcga tttacaactg gcatgtgaag ataattccgg gttaccggaa gagagccagt
    23101 ttcaaacatg gctgaatgcg gtgatcccgc agtttcagga agaatcggaa gtgactattc
    23161 gcgtggtcga taccgccgaa agccacagtc tgaatctgac ctatcgcggt aaggataagc
    23221 cgaccaacgt gctctccttc ccgtttgaag tgccgcctgg catggaaatg tcgctactgg
    23281 gcgatctggt tatctgccgt caggtggttg agaaggaagc tcaggagcaa ggcaaaccac
    23341 tggaggcgca ctgggcgcat atggtggtgc acggcagtct gcatttgtta ggttacgatc
    23401 acatcgaaga tgacgaagca gaagaaatgg aagccctcga aacaaagatt atgcttgctc
    23461 tgggctatga ggatccgtac attgccgaga aagaataatt tgccaggcat ttgactggca
    23521 gacgtccccg ccgttggtga ttaacgacgg cgttttgatt aactaacatg agaacccata
    23581 cgacgccatg agcgacgaca attcacacag tagtgacacg ataagcaaca agaagggatt
    23641 tttctccctg ttactcagcc aacttttcca cggtgaaccg aaaaaccgtg acgaactgct
    23701 ggcgctgatc cgtgattccg ggcagaacga ccttatcgac gaagatacgc gcgatatgct
    23761 cgaaggggtg atggacatcg cagaccaacg cgttcgcgac atcatgatcc cccgctccca
    23821 gatgattacc ctgaaacgca accagacgct ggacgaatgc cttgatgtca tcatcgagtc
    23881 cgcccactca cgtttcccgg tgattagcga agacaaagat cacattgaag ggattctgat
    23941 ggcgaaagac ttgctgccgt ttatgcgcag cgatgctgaa gccttcagca tggacaaagt
    24001 gttacgtcag gcggttgtcg ttcctgaaag taagcgcgta gaccggatgc tgaaagagtt
    24061 tcgctctcag cgttaccaca tggcgatcgt cattgacgaa ttcggtgggg tttccggtct
    24121 ggtgaccatt gaagacatcc tggaactgat tgttggtgag attgaagacg aatatgacga
    24181 agaagatgat atcgacttcc gtcagctgag tcgtcatacc tggaccgtgc gcgcactggc
    24241 ttccattgaa gacttcaacg aagcgttcgg cacccacttt agcgatgaag aagtcgacac
    24301 tatcggtggt ctggtgatgc aggcgtttgg gcatcttccg gcgcgtggcg aaactatcga
    24361 catcgacggt taccagttca aagtggcgat ggccgacagt cgacgtatta ttcaggttca
    24421 tgtcaaaatc ccggatgact caccccagcc gaagctggat gaataaaacc gaaactggat
    24481 agataactac atggcttttg cctcattaat tgaacgccag cgcattcgcc tgctgctggc
    24541 gttattattc ggtgcctgcg gaacgctggc cttctctcct tacgacgtct ggcctgcggc
    24601 gattatttcg ttgatggggc ttcaggcgtt gacctttaac cgccgtccac tccagtctgc
    24661 cgctattggc ttttgctggg gatttggcct ctttggcagc ggtattaact gggtctatgt
    24721 cagcatcgcg acctttggcg gaatgcctgg cccggttaac atcttcctgg tggtggtgct
    24781 ggcggcgtat ttgtcgctgt ataccggact gtttgctggc gtgctgtcgc gtctgtggcc
    24841 gaaaaccacc tggctgcgcg tggcgattgc cgcccctgct ctctggcaag tgaccgagtt
    24901 tctgcgcggt tgggtactga caggcttccc gtggttacag ttcggctata gccagattga
    24961 tggcccgtta aaagggctgg caccgataat gggcgtggaa gccattaact tcctgctgat
    25021 gatggttagt ggcctgctgg cactggcgtt ggtcaaacgc aactggcgtc cgctggtggt
    25081 ggccgtcgtg ctgtttgccc tacccttccc gctgcgttac atccaatggt ttaccccgca
    25141 accggagaaa accattcagg tttcgatggt tcagggcgat attccgcaat cactgaaatg
    25201 ggatggagat cagcttctta atacgctgaa gatttactac aacgcaacgg ctccgctgat
    25261 gggcaaatca tcgttgatta tctggccgga gtcggcgata accgatctgg aaattaatca
    25321 gcaaccgttc ctcaaagcac tggacggtga gttgcgcgat aaaggtagct cgctggtaac
    25381 cgggattgtc gacgcgcgtc tcaataagca gaaccgctac gatacctaca acaccatcat
    25441 cacactgggt aaaggtgcac cgtacagcta cgaatcagcc gatcgctata acaaaaacca
    25501 tctggtgccg tttggcgagt ttgtcccgct ggagtcgatt ctgcgtccgt tagcaccgtt
    25561 ctttgatctg ccgatgtcgt cgttcagccg tgggccatat atccagccgc cgctgtcagt
    25621 aaatggtatt gagcttactg cggctatttg ctacgagatc attctcggcg agcaagtgcg
    25681 cgataacttc cgcccggata ccgactatct gctgactatc tccaacgatg cgtggtttgg
    25741 taaatctatt ggtccatggc aacacttcca gatggcgcga atgcgtgcgc tggagctggc
    25801 gcgcccactg ttgcgcagca ccaacaacgg cattacggcg gtgattggcc cgcagggtga
    25861 gattcaggcg atgatcccgc agttcacccg cgaggtgtta accactaatg tgacaccgac
    25921 caccggactc acaccgtatg cacgtaccgg caactggcca ctgtgggtgc tgacggcact
    25981 gtttggtttt gccgctgtgt tgatgagtct acgagcacgt aaacgttgat gtgcctgatg
    26041 tatcctgcat gagcaaaacg tactttctca ttgagctttg gggcatggtt atcatgcccc
    26101 tttttcttac ggttcaggga tacaagccac attgccatat tggggatgac gaataattgc
    26161 ctgcggatca agcgagcgcg tcctgtccat ttggatcaac ccgttcttcg ccatgacaaa
    26221 tatttttcta ccatccgctg aaaaacgaag gtgattaacg tagctggcag gataaacgcc
    26281 aataatctgc ccggcattaa tattgagcag gatgacataa ccttgcaggc catatgacac
    26341 caacgctaaa tattgaccgt ccgggctaat accctcaacg gaataaacgc tcctgctaca
    26401 ccattgcgtc ataatgctgg cttgttgagc ccctacgctt atacgtgaaa tcccctgact
    26461 atctgcaaaa ataacctcgc cgttttcagg tcgaaaacgc atcgccgata tcgttccacg
    26521 cgcatcacct gcgggaaagt cttctttctg atgcgtgatg gtattgatcc gcacgatgtt
    26581 acctctgcct gctcccggaa ccagtaatgt tctttcatcc ggggaaagtg ccataaccca
    26641 ggcgcctggt ttaccgctcg tccccgcccc gtcgtatttc tccagcggga tatccgccac
    26701 atgctgataa gtcaccagat caatcgctga cacactatta ctggtgcgat tcatcaccca
    26761 ggcttttgtg ccatcacgcg agaggataag gctgtcagga tgtgcaccgg tggtaatcga
    26821 ctgaataatc tcccctgtcg ccacgttaat gaccgataac gcattcgctt caaatgaagt
    26881 cgcataaatc aacttttcat ccgggcttaa tgccagcgat ctgacgccct gatctttaca
    26941 gccaccacaa tgtttgactg acttttcttt cgctatgggc gctgtaaagg tatgcaggat
    27001 tttcttttgt ccgaggtcga aaacaacaat gctgttcgtg ttttcaattg cggcatacaa
    27061 catattacca tcccgactga tcgccatatc atggatatcg gcaatctcag cgagcaaatc
    27121 accactggcc tgttcacgac ttaccggagc ggataatgtt tccttgaggg cgttgcgttc
    27181 ctccgctaac tgctgctttt tttgccgtcg ctcttgttca atctcctgtg gataaaacgc
    27241 ttcacgcaga ctttgcctga cttgtaaaac tgactcatcc atctgctgct gcgcaagcca
    27301 gatagccccg gtcagaagaa gactgcccgc aacaataatc ccgccttccg taacgagtcg
    27361 gttttgccca gataaacgcg cgctcagcca acccaacgcg ccacccgcaa tcaggccgcc
    27421 aatgtgacaa gcattatcta ttcctgtttg ccgggcacca tacaacagtg tcagcgccac
    27481 catacccaac agagaaaata ctcgccgctg gtttttatgg tatgtgcccg cacctgaagc
    27541 aagctgtgtt gctatcgcag cgccagctat tcccataatt gccccgaatg ccccaacgct
    27601 gatgactatc tgatcactat cgcgtaacgc ataacaggcg ctgataagcc caccaaagac
    27661 gccggagaat aaccaggtaa tcaggagtcg ccatttcccc agaatctgtt ccgccacgcc
    27721 tcccacgacc aggaatgcaa acatattcat cagcagatga gaaacactac tgtgcagaaa
    27781 gatactgctc aataagcgcc agggttcacc cgacaaagta agaggcgcaa cgtttgcgcc
    27841 gagatggata agtgcggatt gatcgacctc ttcataactc atccattgtg cgagataaca
    27901 aaatatccca atacagagtg caaaaaggat aagggttatt gcgggtaatt gaacatttaa
    27961 cggcttaacc gaagatgcag acataaggtg tttcttcctt gaaaagacag gtaaaaagca
    28021 tttttcccgt gtgcagttat catcccggca aacgtcccat gccgaaaaga taattctgtc
    28081 cgaaatatga ctttttcagc ctaaaattac aatcgtaatt aatttgcccc taagtatttt
    28141 ttggcatgta agttgcttta tttactgtgt aagcgatgaa atcagccgcg acgcaaccag
    28201 gttgcaccac cacaaatcag cggtagcacc aaaaaggtgc ggtttaagaa ttttgcttcg
    28261 gaatggtgcg gcgcatctcg caaaaacaaa caataaaaca gcaatatctt tacatttagc
    28321 caaactaaat gttacctaac aggcacaaca ctgcacaata aagttgcaga cgataacaac
    28381 acaaacactc acaacgggta tccatgcgtt cttaacgcag aagataaagg agttggatat
    28441 gcaattacgt aaacctgcca cagcaatcct cgccctggcg ctttccgcag gactggcaca
    28501 ggcagatgac gccgccccgg cagcaggcag tacgcagtac gcagtacgct ggacaaaatc
    28561 gccaaaaacg gtgtgattgt cgtcggtcac cgtgaatctt cagtaccttt ctcttattac
    28621 gacaatcagc aaaaagtggt gggttactcg caggattact ccaacgccat tgttgaagca
    28681 gtgaaaaaga aactcaacaa accggacttg caggtaaaac tgattccgat tacctcacaa
    28741 aaccgtattc cactgctgca aaacggcact ttcgattttg aatatggttc taccaccaac
    28801 aacgtcgaac gccaaaaaca ggcggctttc tctgatacta ttttcgtggt cggtacgcgc
    28861 ctgctgacca aaaagggcgg cgatatcaaa gattttgccg acctgaaaga caaagccgta
    28921 gtcgtcactt ccggcactac ctctgaagtt ttgctcaaca aactgaatga agagcaaaaa
    28981 atgaatatgc gcatcatcag cgccaaagat cacggtgact ctttccgcac cctagaaagc
    29041 ggtcgtgccg ttgcctttat gatggatgat gccctgctgg ccggtgaacg tgcgaaagcg
    29101 aagaaaccag acaactggga tatcgtcggc aagccgcagt ctcaggaagc ctacggttgc
    29161 atgttgcgta aagatgatcc gcagttcaaa aagctgatgg atgacactat cgctcaggtg
    29221 cagacttccg gtgaagcgga aaaatggttt gataaatggt tcaaaaatcc aattccgccg
    29281 aaaaacctga acatgaattt cgaactgtca gacgaaatga aagcactgtt caaagaaccg
    29341 aatgacaaag cactgaacta attacaagaa ccaggggcgg aaattccagc cctctcgatt
    29401 gttacgtagc acggacagac tatacgcctg atggtcgttc cccatcgggc ctgaaaaccg
    29461 caatacgctg ggtaacaatc ttcgagggta gcagttaacg ctgctaccct cttttttctg
    29521 gagtagattt atgtctatag actggaactg gggtattttt ttacaacaag ccccgttcgg
    29581 caacaccacc tatcttggtt ggatctggag tggttttcag gtgacgatcg ctttgtcgat
    29641 ctgcgcctgg attatcgctt tcctcgtcgg ttcatttttc ggcattttac gtaccgttcc
    29701 aaaccgtttt ctctccggtc tgggtacgtt gtatgtcgaa ctgttccgca acgtgccgtt
    29761 gattgtgcaa ttctttacct ggtatctggt gatcccggag ctgttgccgg agaaaatcgg
    29821 catgtggttt aaggccgagc tggatcccaa tattcagttt ttcctttcat ccatgctctg
    29881 cctggggctg tttaccgccg cccgtgtttg cgaacaggta cgcgccgcca ttcagtcgtt
    29941 gccgcgtggg caaaaaaatg ccgcgctggc gatgggcctg acgctaccgc aggcttatcg
    30001 atacgtactg ctgcctaatg cttatcgcgt tatcgtcccg ccgatgactt ccgagatgat
    30061 gaacctggtg aaaaactccg ccatcgcctc gactattggt ctggtggata tggcggcgca
    30121 ggcgggtaaa ttgcttgatt actcagccca cgcctgggag tcgtttaccg ctattacgct
    30181 ggcgtatgtg ttgattaacg cgattatcat gctggtaatg acgctggttg aacgtaaagt
    30241 tcgcctgcct ggcaacatgg ggggcaaata atgtacgagt ttgactggag ttccattgtc
    30301 ccttccctgc catatctgct cgacgggctg gtgatcacgc tgaaaatcac cgtcacggca
    30361 gtcgtgattg gtattttgtg gggcaccatg ctggcggtga tgcgcttgtc cagctttgcg
    30421 cccgtagcgt ggtttgccaa agcctacgtt aacgtattcc gctcgattcc tttagttatg
    30481 gttttgctgt ggttttacct gatcgtgcca ggttttctgc aaaacgtgct gggattatca
    30541 ccaaaaaatg atatccgttt aatttcggcg atggtggcgt tttcgatgtt tgaagcggcc
    30601 tactattcag agattatccg tgctggtatt caaagtattt ctcgtggtca gtcgagcgcc
    30661 gcgctggcgt tgggaatgac tcactggcag tcgatgaaac tgattattct gccgcaggcg
    30721 ttccgcgcga tggtgccgct tctgctcact cagggcatcg tactgttcca ggatacctca
    30781 ctggtgtatg tgttatctct ggccgatttc ttccgtaccg cctcaaccat tggtgagcgt
    30841 gatggtacgc aggttgagat gatcctgttt gccggatttg tttatttcgt tattagtctt
    30901 agcgcgtcgt tgttggtcag ctacttgaaa agaaggacag cataatgatt accctgaaaa
    30961 atgtttcaaa atggtatggt cactttcagg tgctgaccga ctgctcaacc gaagtgaaaa
    31021 aaggcgaagt ggtggtggtt tgcggcccgt ctggttccgg caaatcaacg ctgattaaaa
    31081 ccgtcaacgg cctcgaacca gtgcagcaag gtgaaatcac cgtcgatggt atcgtggtta
    31141 atgacaagaa aaccgatctg gcaaagctgc gttcccgcgt cgggatggtg ttccagcatt
    31201 ttgagttgtt cccccatttg tcgattattg aaaacctgac tctggcgcag gtgaaagtgc
    31261 ttaaacgcga taaagcgccc gctcgtgaaa aagcattgaa attgctggag cgcgtgggac
    31321 tttccgcaca tgccaataaa tttccggcgc agatttccgg cggtcagcag cagcgtgtgg
    31381 caatcgctcg cgcgttgtgt atggatccta ttgcgatgct gttcgacgaa ccgacatcgg
    31441 cgctggatcc ggagatgatc aacgaagtgc tggacgtgat ggtggaactg gcgaacgaag
    31501 gaatgaccat gatggtgggg acccacaaaa tgggctttgc ccgcaaagtg gcgaatcggg
    31561 tgatctttat ggacgagggt aaaattgtcg aagactcgcc gaaagacgct ttcttcgatg
    31621 atccgaaatc ggaccgcgcg aaagacttcc tcgcgaaaat cctgcattaa tcactctggc
    31681 gcgcataccc aagtgcgcgc catctcacgc tttatcgttt cgcccctcgt atctgttaca
    31741 tcctggcgtt acccttgtcg caaagaagca cacaacaagg agcaacaatg gcactgccaa
    31801 ttctgttaga ttgcgaccca ggtcatgacg acgctatcgc aatagttctc gccctcgcct
    31861 caccagagct tgatgtcaaa gcaattacgt cttccgccgg aaaccagaca ccagaaaaaa
    31921 ccttacgcaa tgttctgcgt atgctgacct tgcttaatcg caccgatatt ccggtagcag
    31981 gcggcgcggt aaaaccgtta atgcgtgagt tgattatcgc ggacaatgtg cacggcgaaa
    32041 gcggtctgga tggcccggca ttaccggaac cgacgttcgc accgcaaaac tgtacggcgg
    32101 tagagctgat ggcgaaaacg ctgcgcgaaa gtgcggaacc tgtcacgatt gtgtctaccg
    32161 gaccgcaaac taacgttgcc ttgctgctca atagccatcc ggaactgcat agcaaaattg
    32221 cccgtatcgt gattatgggc ggcgcaatgg ggcttggtaa ctggacgcct gcggctgaat
    32281 ttaatattta cgttgacccg gaagcggcag aaattgtctt ccagtcaggg atcccagtgg
    32341 tgatggccgg tctggatgtt actcataaag cgcaaatcca cattgaagac accgagcgtt
    32401 tccgcgcgat tggcaaccct gtttcaacca ttgttgccga actgctggat ttcttcctcg
    32461 aatatcataa agacgaaaaa tggggctttg tcggtgcacc gctgcatgac ccatgcacca
    32521 tcgcctggct gttgaaaccc gagttgttta ccactgttga gcgctgggtt ggcgtggaaa
    32581 cacaggggaa atatacccag ggtatgacgg ttgttgatta ttattatctg actggcaata
    32641 aaccgaatgc cactgtaatg gtcgatgttg atcgtcaggg ctttgttgat ttactggctg
    32701 atcgtctgaa attttacgct taacacacgt cattgattaa gatcaccacg cgttacctgg
    32761 gtggtcttaa tctgtttatc tctttttctt tcaagatata aatgcaatgg ataatgcaga
    32821 actcaccatt ggtatcgatc tcggcactac caatagttta attgccgtct ggaaagacgg
    32881 tgccgcgcaa ttaattccaa ataagttcgg tgaatattta acaccatcca taattagcat
    32941 ggatgaaaat aatcatattt tagtcggaaa accggctgta tcacggcgta cttcgcatcc
    33001 ggataaaaca gcagcgttat ttaaacgcgc aatgggcagt aataccaact ggcggttagg
    33061 cagcgacaca tttaacgcgc cagaactgtc ctctttggta ttacgctcat taaaagaaga
    33121 tgccgaagaa tttctgcaac gtccgattaa agatgtggtg atctccgttc cggcttattt
    33181 cagcgatgaa caacgcaagc atacccgttt agctgcggag ttagccgggt taaatgcggt
    33241 acgcttaatt aatgaaccca cagcagctgc gatggcatat ggcctgcata cgcaacaaaa
    33301 tacccgctcg ctggtttttg atctcggtgg cggcacgttt gacgttacgg tgcttgagta
    33361 cgccacgccg gtgattgaag ttcacgcctc cgctggcgat agcttcctcg gtggcgaaga
    33421 ttttacccat atgctggtcg atgaggtttt aaaacgcgcg gaagttgcca ggaccacgct
    33481 taacgagagt gaactggcag ccttgtacgc ctgtgtggaa gcggcaaaat gtagcaatca
    33541 atcgccattg cacattcgct ggcagtatca ggaagaaacg cgggaatgcg aattttacga
    33601 gaacgaactg gaagatttgt ggttgccgct gctcaatcgc ttgcgagtgc cgattgaaca
    33661 ggcgttgcgc gatgcgcgtc tgaagccgag tcaaatcgac agtctggtac tggttggcgg
    33721 cgcgtcacaa atgccgctgg tgcagcgaat cgccgtgcgt ctgtttggca aattaccgta
    33781 tcaaagttac gatccgagca ccatcgtcgc gctgggcgca gcaatccagg ccgcctgccg
    33841 cttacgcagt gaagatattg aagaggtaat cctcactgat atttgccctt actcgttggg
    33901 cgttgaagtt aaccgccagg gcgtttccgg cattttctcg ccgattattg aacgaaacac
    33961 cacagtaccg gtgtcgcgtg tagaaactta ctcgaccatg cacccggagc aggattcaat
    34021 tacggttaac gtctatcagg gagaaaacca caaagttaaa aataacattc tggttgaatc
    34081 cttcgatgtg ccgttgaaga aaaccggggc ttatcagtcg attgatattc gctttagtta
    34141 tgatatcaac gggttgcttg aagttgacgt gcttctggaa gacggcagcg ttaagtccag
    34201 agtgattaac cacagcccgg taacattgag cgcgcagcag attgaagaga gtcggacgcg
    34261 gttatccgca ttgaaaattt atccgcgcga tatgctcatc aatcgcacct ttaaagccaa
    34321 actggaagag ttgtgggcgc gagcgctggg tgacgagcga gaagagattg gccgggtgat
    34381 caccgatttt gatgcggcgc tacagtcaaa cgacatggcc cgcgtggatg aagttcggcg
    34441 gcgggcgagc gattatttag ccattgagat cccataaaca cggctgccgg atgcggcgta
    34501 aacgctgcat ccggcatcgg cgcaaaaaac acatcgtcaa ctaaacaaca tcgcgatttt
    34561 gccgagagca taacctatca ccagcaccgt taaactgatt ttgataatgc tggtaatgct
    34621 ctgtggtttt tcatcctcat catttttttc ttcatggttt tcaggtgttg gctcatcgac
    34681 atcttcatcc tccggctcga gtttcacttt cgtcaacagc atccgggtga taatggcctc
    34741 taatggatga gcatctccgc cttccagcct tgtattaaga cgggccagca tctcttgttt
    34801 cggaaacgct tcaagcacta cctgttccgc tacccgatac aaatccagta acggtgaatc
    34861 ttgctctgtc tcgctaccga ctctcgattt ccaccacgcc catgctttgc gtttgaagaa
    34921 taacgactca ataaacgatt gacctaacgg cgataatttt ccgctatgta aaatctccgc
    34981 ccataacagc cgcgtccggg cgctctcacc aggaacatat ttcaatggtt tactttgcgc
    35041 atctaccatg ctctgcgctt cgataaccat cactaataac gcgaaataat ctgggcaatg
    35101 acgcttactc cactgcaaca acaaattatc agcttgtgta gatgggtaac tttcccggta
    35161 cgcgcagaga tcggcaagca ggctttcccc ctcgccgcag tacaaccttt gagcacacaa
    35221 gtaatatcgg gcatcttcgc tttctggttc ttccatttgc cactgtttgg ctacaggaat
    35281 gagttccgcc atacctgttt gcaccgagct gtaccagcgc aacagtttgc gatgtaactt
    35341 tgcatcatca ggaatgaacc acggaccttc catcgccaaa aacgcagtga catagtcagg
    35401 atggtaacgg cagcaacgtt ccagcgcgaa gtaatactca acagtctggt tctgcaacgc
    35461 aacgggatat tccagaaggc taaggaaatc gaaacaatca ccagcctgaa tggcctcaag
    35521 aaaagcctcc ctttcttcct catccattcc ttcgctgtca ttaaacgaat gccagttcaa
    35581 acgctctgcc agcaaagaag cacaattcaa tgaaagatat cgcgcttcta tagcgattgc
    35641 acacagcggc cagcgtaatt gatcgacatc ctccatgttc caggtattta attgctgaat
    35701 aaatttctgc caggcggagg gctgaaaacg atcactttct gaatccagta atgtcctgaa
    35761 tgcacgcagt atttcatgtt cagcggcggc atctttttct tcatcatctg cttcctcgac
    35821 aggatttacc gccagtcgca gcgcctcttc ataggcctgg cgtaatgctt taaacccctg
    35881 cggatcggtt tcgggatgac ataacggtaa gcgagcaaga taagcctggc ggataatgtc
    35941 tatttgcgtc gtgctttcaa tttcgaggat ttgccaacat gttttcatag gtcgctcaca
    36001 tccttaagcg ttaccgggca ttcaggctgg acagttaatg gttgccaggg aagcgtggca
    36061 tagaaacgat cgcttcccgc tgccagctct tcgaacatcc gactcccggc gctatcgtat
    36121 ttgtacaggg ttagcgcctc gcgtagcgaa gtgttgtctt cgcactgaga agattgccag
    36181 tagagacgcc ctaacgaata ggcagaaaaa tagtgcatcc agccgtgata gtaatggtga
    36241 gctcgtacat agacgcgcga ttgcagccat aaactctctt cttccgtcag ccacttgttg
    36301 agcacaccga cccgtgacag aaaccccatt cgaacataat cccaagcttt gattcaccct
    36361 tccccacagc acatagcggt ttgggcaacg aattgggtat aaatcaaccc tctctccgag
    36421 ccaccagcaa ttaatgcttt ccactcttca ggggaagagc gatgccatgt cagatataag
    36481 ccagctaaat cattggcatg accatcatca gtcatctgat aaatagtctg aattaaatca
    36541 tcacgattat ttattcccca ggatgatgag agatcgaatt cttttatacc ggtatacatt
    36601 tttggcgagt catgcgcggg tttgcaaccc tgattaagta tttccatggg cgcagaaagc
    36661 gcaaaaagaa gatattgttc ttccttattc atttgttaat aatcccttaa gtgcattaac
    36721 tgactacttt tttatattac ttgccgggct ttccgcacat taacgtcgac tgtcacccga
    36781 acagatggag tattttccct atcaaaccgg caaagataaa aatgtagaaa ataattttga
    36841 tgacgcccag acagcccggc ccaccatcgt caacgggcat tggctgcggt tgcggctccg
    36901 gttcaacagt ttgcttctcg gtaaaattcg ccgcctgaat taataatcga cgaataatta
    36961 atgcttccag tggacaacga tcttctgcat caagacggct tacgatcggc attaatgatt
    37021 cttctgtcgg ttggctggcc tgcactaatt gtttggcaac taaatataat ggccataaga
    37081 gatgttctgt atcacgcgtg agtgagatcc gcggcttacg tcctttgtgc aaaaccatct
    37141 cgaccagtga acgccccagc gcagagagtt tttcatcgct gagtatttcg tataaatgaa
    37201 aacgcgtacg ggcgctgtcg ccggggacat aaagtagctg tttaccctga tcgttaacca
    37261 gttcacgagc ttcaatcatc atcaccacta acgggtaata atcgacccga tgctgacggc
    37321 accattgcaa tattaaagca tccgcctggg tggagggata ctcgcgccag tagtcacaaa
    37381 gttctgccag caagctttcg ccttctccac aatagacgcg ttgcgcgtat tcataataac
    37441 gcgcatcttc attatcaggt tcagcttccc gccacgaccg ggcgtaatcc agaagttcgg
    37501 ggatatccag gcgacctgcg ctataccagc ggagtaaatt tctgtgcagt tttgcatcat
    37561 cggggatgat cactgcgcga tgttgcgcta aatacaatgt cagccattct ggatgcgatg
    37621 accaaatccg agcgaacatt tggtaaaaat cgatggtgtc attttgcacg gcaacgggca
    37681 gatgcagaat ggtctggaag ttaaaaacat tccccttcgc aatggcatat aaaaaggatt
    37741 ccagttcttc ttcgtctatt tccccgacgt tttcctcctg caaccaccgc aatctttctg
    37801 ctaataacac cacgcactcg aaggataaat gagcagtgtt catggcgatt gtgcacagcg
    37861 accagcgtaa ttcatcaatc tcttccatcg agcaataatt taattgctga atgaatcgct
    37921 gctaggcgga gggcagaaaa cgttcgctat cagaggcaag taacgcgcga aaggcgagca
    37981 gaatttcatg ttctgctacc tcatattctt ctggttgcca aacagattta gcaggcgact
    38041 gcgcaatccg tagcgcctcc tcatacgcct gacgaagttg tttaaaaccc tgcggatcgg
    38101 tttctggatg aaaggacggt aacagcgcca gataagcgcg gcggataata tcgacgtcag
    38161 tcgtttcctc tatatcgagg atcttccagc aatttttcat aagtcgctca tatccttaag
    38221 cgtttccggg catgtggggt agtcagccag tggttgccag gacaaggtag ggtaatacgc
    38281 atcatcactg gcaaataatt gataaaacat atcattgc
//
LOCUS       DADMHC010000013        38161 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.013, whole genome shotgun sequence.
ACCESSION   DADMHC010000013 DADMHC010000000
VERSION     DADMHC010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 38161)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38161)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38161
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.013"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(203..1732)
                     /locus_tag="JNZ57_000549"
     CDS             complement(203..1732)
                     /locus_tag="JNZ57_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000283226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HAY8826872.1"
                     /translation="MYPIALLSVCGMMLGLGSGLASDDMAKFIPVLAIPLIKTILDFI
                     VSLGLFAFVNLPVLFAIAIPLGLLKEKDDKAYGAFSGLIGFMAMHLGTNFYLKQHDLL
                     VAADQMSTHGQTIILGIQSYNTSVLGGIVAGLLVASMYKKIVNLRIPESLGFYSGPRL
                     VPIITLIVMSGFGLIIPFIWPPFFNLFMLIGHWISTSGPVGYFFYAVAERVTIPFGLN
                     HLVTSVFRFTPIGGSAVIGGEEYYGTLNMFMAYVKENAVIPLDLAGKMEQGKLMIQYG
                     LAGAALAMYRTAHAQNRRAIKALLISGVLTVIIGGVSEPIEFLFLFVSPLLFVFHAFM
                     NGLANMVLPYMGVKMGFTGDLIQFISFGVLRGTRTGWPLAVCVEVAYFFIYYFVFRWT
                     ILKFNLMTVGREESSPVTLNAHEETAIANIPVHDKSELQAAEQMVKALGGKENIKSLD
                     NCVTRLRLTIADMGLIDEAAIKRAGGIAVVKLDQNTLQVIIGTKVIALRRDMDNYMGI
                     C"
     gene            complement(1814..2639)
                     /locus_tag="JNZ57_000550"
                     /pseudo
     CDS             complement(1814..2639)
                     /locus_tag="JNZ57_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003843851.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
     gene            complement(2898..4151)
                     /locus_tag="JNZ57_000551"
     CDS             complement(2898..4151)
                     /locus_tag="JNZ57_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311701.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMIN domain-containing protein"
                     /protein_id="HAY8826873.1"
                     /translation="MSGSNTAISRRRLLQGAGAMWLLSVSQVSLAAVSQVVAVRVWPA
                     SSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIKSAR
                     VGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANAQDMQDPLLALLED
                     YNKGDLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQI
                     ARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPSG
                     SSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLK
                     FGKAVLNKLGKINKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQ
                     QEVAESILAGIKAYFADGATLARRG"
     gene            4382..5713
                     /gene="argA"
                     /locus_tag="JNZ57_000552"
     CDS             4382..5713
                     /gene="argA"
                     /locus_tag="JNZ57_000552"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HAY8826874.1"
                     /translation="MVKERKTELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHENFSS
                     IVNDIGLLHSLGIRLVVVYGARPQIDANLAVHHHEPLYHKNIRVTDAKTLELVKQAAG
                     TLQLDITARLSMSLNNTPLQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEDA
                     IHRQLDSGAIVLMGPVAVSVTGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVTNDD
                     GDIVSELFPNEAQARVEAQEEKGDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGAL
                     LQELFSRDGIGTQIVMESAEQIRRATINDIGGILELIRPLEQQGILVRRSREQLEMEI
                     DKFTIIQRDNTTIACAALYPFPEEKIGEMACVAVHPDYRSSSRGEVLLERIAAQAKQS
                     GLSKLFVLTTRSIHWFQERGFTPVDIDLLPESKKQLYNYQRKSKVLMADLG"
     gene            complement(5775..7601)
                     /locus_tag="JNZ57_000553"
     CDS             complement(5775..7601)
                     /locus_tag="JNZ57_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RecBCD enzyme subunit RecD"
                     /protein_id="HAY8826875.1"
                     /translation="MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSH
                     DAGEGHVCLPLSRLENNEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMIL
                     CGDRLYLNRMWCNERTVARFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAV
                     ALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGK
                     ALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDL
                     PMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLSRLTG
                     THVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTD
                     IEKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALREGPFG
                     VAGLNERIEQFMQQKRKIHRHPHSRWYEGRPVMIARNDSALGLFNGDIGIALDRGQGT
                     RVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKSQGSEFDHAALILPSQRTPVVTRELV
                     YTAVTRARRRLSLYADERILSAAIATRTERRSGLAALFSSRE"
     gene            complement(7601..11143)
                     /gene="recB"
                     /locus_tag="JNZ57_000554"
     CDS             complement(7601..11143)
                     /gene="recB"
                     /locus_tag="JNZ57_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HAY8826876.1"
                     /translation="MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGL
                     GGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLE
                     EIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLR
                     YQACADFWRRHCYPLPREIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETL
                     ASRHAQIVARIATVKQQWRDAVGELDALIESSGIDRRKFNRSNQAKWIDKISAWAEEE
                     TNSYQLPESLEKFSQRFLEDRTKAGGETPRHPLFEAIDQLLAEPLSIRDLVITRALAE
                     IRETVAREKRRRGELGFDDMLSRLDSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQ
                     QYRIFRRIWHHQPETALLLIGDPKQAIYAFRGADIFTYMKARSEVHAHYTLDTNWRSA
                     PGMVNSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGETQPAMKMWLMEGES
                     CGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAAQ
                     VRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLN
                     ALDIETLNNDEHAWDAVVEEFDGYRQIWRKRGVMPMLRALMSARNIAENLLATAGGER
                     RLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQIVT
                     IHKSKGLEYPLVWLPFITNFRVQDQAFYHDRHSFEAVLDLNAAPKSVDLAEVERLAED
                     LRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTC
                     IEALCDDDIAWQTAQTGDNQPWQVNDALTAELNARTLQRLPGDNWRVTSYSGLQQRGH
                     GIAQDLMPRLDVDAAGVVSVVEEPTLTPHQFPRGASPGTFLHSLFEDLDFTQPVDPNW
                     VQEKLELGGFESQWEPMLTEWITAVLQAPLNEKGVSLSQLSDRDKQVEMEFYLPISEP
                     LIASQLDALIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLDYKSNWLGE
                     DSSVYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYDRHFGGVIYLFLRGV
                     DKEHPQQGIYTTRPNAGLIALMDEMFAGMTLEEA"
     gene            complement(11136..14024)
                     /gene="ptrA"
                     /locus_tag="JNZ57_000555"
     CDS             complement(11136..14024)
                     /gene="ptrA"
                     /locus_tag="JNZ57_000555"
                     /EC_number="3.4.24.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin"
                     /protein_id="HAY8826877.1"
                     /translation="MPRSTWFKALLLLVALWAPLSQAETGWQPIQETIRKSDKDNRQY
                     QAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYP
                     QADSLAEYLKMHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAE
                     RERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQAL
                     KDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKG
                     IIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVE
                     GISANSDPIVNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDEL
                     ANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMT
                     PQNARIWYISPKEPHNKTAYFVDAPYQVDKISEQTFADWQQKAANIALSLPELNPYIP
                     DDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFSSEPKADVSLILRNPKAMDSARNQ
                     VMFALNDYLAGLALDQLSNQASVGGISFSTNANNGLMVNANGYTQRLPQLFQALLEGY
                     FSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSI
                     TLKEVLAYRDALKSGARPEFMVIGNMTEAQATTQARDVQKQLGADGSEWCRNKDVVVD
                     KKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLG
                     YAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKPDEFAQIQQ
                     AVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADFFHQAVV
                     EPQGMAILSQISGSQNGKAEYVHPEGWKVWENVSALQQTMPLMSEKNE"
     gene            complement(14200..17568)
                     /gene="recC"
                     /locus_tag="JNZ57_000556"
     CDS             complement(14200..17568)
                     /gene="recC"
                     /locus_tag="JNZ57_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HAY8826878.1"
                     /translation="MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQ
                     WLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQL
                     LEHEDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPEWLAQWETGHLVEGLGE
                     AQAWQAPLWKALVEYTHELGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA
                     LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL
                     FRDSENAGQLFNSDGEQDVDNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL
                     LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR
                     LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV
                     LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD
                     DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS
                     LLMQLNIWHRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL
                     GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND
                     GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGLSIQDNS
                     ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE
                     RQSYAREWLPAASRAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN
                     FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE
                     IFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWHPSLL
                     SVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREG
                     MSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDI
                     WYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS"
     gene            complement(17581..17904)
                     /locus_tag="JNZ57_000557"
     CDS             complement(17581..17904)
                     /locus_tag="JNZ57_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HAY8826879.1"
                     /translation="MSASLKNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLASR
                     NQYQQLWRHGWQQTQLRAISPPANWQVNRLQTSQAGCVSISVTLVSPGGREGEMTRLH
                     CPNRQ"
     gene            complement(17889..18296)
                     /locus_tag="JNZ57_000558"
     CDS             complement(17889..18296)
                     /locus_tag="JNZ57_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2509 family protein"
                     /protein_id="HAY8826880.1"
                     /translation="MNREKGVSSLALVLMLLVLGSLLLQGMSQQDRSFASRVSMESQS
                     LRRQAIVQSALAWGKMHSWQTQPAVQCSQYAETDAQVCLRLLADNEALLIAGYEGVSL
                     WRTDEVIDGNIVFSPSGWSDFCPLKERALCQLP"
     gene            complement(18293..18856)
                     /locus_tag="JNZ57_000559"
     CDS             complement(18293..18856)
                     /locus_tag="JNZ57_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
                     /protein_id="HAY8826881.1"
                     /translation="MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTSTRK
                     LALEDEIWLRVFTVAKHLQRAGYCHGICTGEGLEIVGQGDCIIVQWDANSNGIWDREP
                     VKESDQIGFRLKEHVLETLRGATSCEGKGWDKVTNPDAIIIDTFQVVRQDVSGFSPVL
                     TVNMRAASKSEPQTVVNASYSVTGFNL"
     gene            complement(18847..19317)
                     /locus_tag="JNZ57_000560"
     CDS             complement(18847..19317)
                     /locus_tag="JNZ57_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
                     /protein_id="HAY8826882.1"
                     /translation="MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTAS
                     QARDYLLYLREDANWHNRDHSISVIREGTLWCLVSSAAGANTCHGSSPLVFVPRWPEV
                     EMSDLTPSLAFFGLRNTAWAGHIRFKNSTGEWWLVVSPWGRLRLCQQGETEGCL"
     gene            complement(19502..20296)
                     /gene="thyA"
                     /locus_tag="JNZ57_000561"
     CDS             complement(19502..20296)
                     /gene="thyA"
                     /locus_tag="JNZ57_000561"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HAY8826883.1"
                     /translation="MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPL
                     VTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWP
                     TPDRRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLS
                     CQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHL
                     QLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI"
     gene            complement(20303..21178)
                     /gene="lgt"
                     /locus_tag="JNZ57_000562"
     CDS             complement(20303..21178)
                     /gene="lgt"
                     /locus_tag="JNZ57_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HAY8826884.1"
                     /translation="MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRR
                     ANRPGSGWTKNEVENLLYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSF
                     HGGLIGVIVVMIIFARRTKRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNF
                     PFAMLFPGSRTEDILLLQTNPQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYI
                     RKPRPMGAVSGLFLIGYGAFRIIVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVI
                     MMVWAYRRSPQQHVS"
     gene            complement(21329..23575)
                     /gene="ptsP"
                     /locus_tag="JNZ57_000563"
     CDS             complement(21329..23575)
                     /gene="ptsP"
                     /locus_tag="JNZ57_000563"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HAY8826885.1"
                     /translation="MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLAD
                     HDRRCYYLMATRGLKKPRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSV
                     KEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQLT
                     ALFGQYRQTRIRALPAAPGVAIAEGWQDATLPLMEQVYQASTLDPALERERLTGALEE
                     AANEFRRYSKRFAAGAQKETAAIFDLYSHLLSDTRLRRELFAEVDKGSVAEWAVKTVI
                     EKFAEQFAALSDNYLKERAGDLRALGQRLLFHLDDANQGPNAWPERFILVADELSATT
                     LAELPQDRLVGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLIVDGYRGE
                     LLVDPEPVLLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEK
                     LGSRIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPVTLRTLDVGADKQL
                     PYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLNILLPMVTSLDEVD
                     EARRLIERAGREVEEMIGYEIPKPRIGIMLEVPSMVFMLPHLAKRVDFISVGTNDLTQ
                     YILAVDRNNTRVANIYDSLHPAMLRALAMIAREAEIHGIDLRLCGEMAGDPMCVAILI
                     GLGYRHLSMNGRSVARVKYLLRRIDFAEAENLAQRSLEAQLATEVRHQVAAFMERRGM
                     GGLIRGGL"
     gene            complement(23588..24118)
                     /gene="rppH"
                     /locus_tag="JNZ57_000564"
     CDS             complement(23588..24118)
                     /gene="rppH"
                     /locus_tag="JNZ57_000564"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001655775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HAY8826886.1"
                     /translation="MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGE
                     SAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLL
                     QLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQE
                     NTPKPQNTSAYRRKRG"
     gene            24803..25492
                     /gene="mutH"
                     /locus_tag="JNZ57_000565"
     CDS             24803..25492
                     /gene="mutH"
                     /locus_tag="JNZ57_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutH"
                     /protein_id="HAY8826887.1"
                     /translation="MSQPRPLLSPPETEEQLLAQAQQLSGYTLGELAALAGLVTPENL
                     KRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTG
                     NSGVTWETSHVRHKLKRVLWIPVEGERSIPLAQRRVGSPLLWTPNEEEDRQLREDWEE
                     LMDMIVLGQVERITARHGEYLQIRPKAANAKALTEAIGARGERILTLPRGFYLKKNFT
                     SALLARHFLIQ"
     gene            25561..26274
                     /locus_tag="JNZ57_000566"
     CDS             25561..26274
                     /locus_tag="JNZ57_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HAY8826888.1"
                     /translation="MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQ
                     RAHARRLGLAGAMVMRLALLASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWK
                     ASKEIHESIEGEEEGLKTRVSSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAA
                     VVIAVGVMMFAARSIGDFVERHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAM
                     FFSIAVESLNLIRNKKNPL"
     gene            26412..26630
                     /gene="ygdR"
                     /locus_tag="JNZ57_000567"
     CDS             26412..26630
                     /gene="ygdR"
                     /locus_tag="JNZ57_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein YgdR"
                     /protein_id="HAY8826889.1"
                     /translation="MKKWAVIISAVGLAFAVSGCSSDYVMATKDGRMILTDGKPEIDD
                     DTGLVSYHDQQGNAMQINRDDVSQIIER"
     gene            26738..27778
                     /locus_tag="JNZ57_000568"
     CDS             26738..27778
                     /locus_tag="JNZ57_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(H)-dependent aldo-keto reductase"
                     /protein_id="HAY8826890.1"
                     /translation="MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGI
                     NLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPD
                     QALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDT
                     LDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPSIVTIQNPYSLLNRSFEVG
                     LAEVSQYEGGELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAA
                     YVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVLAEI
                     EAVHQVYTYPAP"
     gene            complement(27810..29003)
                     /gene="lplT"
                     /locus_tag="JNZ57_000569"
     CDS             complement(27810..29003)
                     /gene="lplT"
                     /locus_tag="JNZ57_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid transporter LplT"
                     /protein_id="HAY8826891.1"
                     /translation="MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQ
                     FYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINP
                     FLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLAD
                     WHVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGET
                     RFSLVGTSLFWGAGVTLRFLLVLWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKL
                     VTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVMGGFFVVPLNALLQERG
                     KKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMVGIPVVPIGIGFGALFALAITALWI
                     WQRRH"
     gene            complement(28996..31155)
                     /gene="aas"
                     /locus_tag="JNZ57_000570"
     CDS             complement(28996..31155)
                     /gene="aas"
                     /locus_tag="JNZ57_000570"
                     /EC_number="2.3.1.40"
                     /EC_number="6.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acyl-ACP--phospholipid
                     O-acyltransferase/long-chain-fatty-acid--ACP ligase"
                     /protein_id="HAY8826892.1"
                     /translation="MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGIL
                     LGLFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVI
                     FPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQI
                     TLHILPPTQVAMPDASRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFG
                     AGKKCVEDVNFTPDSYRKLLTKTLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAI
                     ARRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLE
                     DLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILA
                     NVEQIKTIADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPEL
                     VYDRSCTVLFGTSTFLGHYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRIL
                     EGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKGPNIMNG
                     YLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMV
                     SLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFTTDNELTRDKLQQYAREHGVPEL
                     AVPRDIRYLKQMPLLGSGKPDFVTLKSWIDEAEQHDE"
     gene            31544..32575
                     /gene="galR"
                     /locus_tag="JNZ57_000571"
     CDS             31544..32575
                     /gene="galR"
                     /locus_tag="JNZ57_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator GalR"
                     /protein_id="HAY8826893.1"
                     /translation="MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLS
                     YHPNANARALAQQTTETVGLIVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQ
                     KERQAIEQLIRHRCAALVVHAKMIPDADLASLMKQMPGMVLINRILPGFENRCIALDD
                     RYGAWLATRHLIQQGHTRIGYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGE
                     PDESGGEQAMTELLGRGRNFTAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVL
                     VSRYVRPRLTTVRYPIVTMATQAAELALALADNRPLPEITNVFSPTLVRRHSVSTPSL
                     EASHHATSD"
     gene            complement(32582..33844)
                     /gene="lysA"
                     /locus_tag="JNZ57_000572"
     CDS             complement(32582..33844)
                     /gene="lysA"
                     /locus_tag="JNZ57_000572"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HAY8826894.1"
                     /translation="MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALK
                     QFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTAD
                     VIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGE
                     NSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQD
                     LQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQ
                     SGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVE
                     TVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRSLL
                     PEVLFDNGQARLIRRRQTIEELLALELL"
     gene            33966..34901
                     /gene="lysR"
                     /locus_tag="JNZ57_000573"
     CDS             33966..34901
                     /gene="lysR"
                     /locus_tag="JNZ57_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator LysR"
                     /protein_id="HAY8826895.1"
                     /translation="MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEK
                     VIGLKLFERVRGRLHPTVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLP
                     VFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTER
                     TELLSLDEVCVLPPGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKR
                     RMIVETHSAASICAMVRAGVGVSVVNPLTALNYAASGLVVRRFSIAVPFTVSLIRPLH
                     RPSSALVQAFSEHLQAGLPKLVTSLDAILSSATTA"
     gene            complement(34888..35580)
                     /gene="ygeA"
                     /locus_tag="JNZ57_000574"
     CDS             complement(34888..35580)
                     /gene="ygeA"
                     /locus_tag="JNZ57_000574"
                     /EC_number="5.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HAY8826896.1"
                     /translation="MKTIGLLGGMSWESTIPYYRLINEGIKQRLGGLHSAQVLLHSVD
                     FHEIEECQRRGEWDKTGDILAEAALGLQRAGAEGIVLCTNTMHKVADAIESRCTLPFL
                     HIADATGRAITGAGMTRVALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQI
                     IFEELCLGQFTEASRAYYAQVIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFDTAA
                     IHAEDAVAFMLS"
     gene            complement(35709..37127)
                     /locus_tag="JNZ57_000575"
     CDS             complement(35709..37127)
                     /locus_tag="JNZ57_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
                     /protein_id="HAY8826897.1"
                     /translation="MVTINTESALTPRSLRDTRRMNMFVSVAAAVAGLLFGLDIGVIA
                     GALPFITDHFVLTSHLQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLG
                     SIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLG
                     IVLAFLSDTAFSYSGNWRAMLGVLALPAVLLIILVVFLPNSPRWLAEKGRHIEAEEVL
                     RMLRDTSEKAREELNEIRESLKLKQGGWALFKINRNVRRAVFLGMLLQAMQQFTGMNI
                     IMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVM
                     ALGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKC
                     RDFGITCSTTTNWVSNMIIGATFLTLLDSIGAAGTFWLYTALNIAFVGITFWLIPETK
                     NVTLEHIERKLMAGEKLRNIGI"
     gene            complement(37442..>38161)
                     /gene="kduD"
                     /locus_tag="JNZ57_000576"
     CDS             complement(37442..>38161)
                     /gene="kduD"
                     /locus_tag="JNZ57_000576"
                     /EC_number="1.1.1.127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase
                     KduD"
                     /protein_id="HAY8826898.1"
                     /translation="VTGCDTGLGQGMALGLAQAGCDIVGINIVEPTETIEQVTALGRR
                     FLSLTADLRKIDGIPGLLDRAVAEFGHIDILVNNAGLIRREDALEFSEKDWDDVMNLN
                     IKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMAN
                     EWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPIVFLA
                     SSASDYVNGYTIAVDGGWLAR"
BASE COUNT         9588 a        10306 c         9197 g         9070 t
ORIGIN      
        1 tcatcatgct gccaacgact gtaccctaaa atcgggtgtt ccagacgttt ttttaatgtt
       61 ctgatgatag cttccggtat cggaagatcc atatctgaaa tagagaatgg taatacatct
      121 tttacaccaa atctgtcttc acaaaagtcc cattgtgtgc aatatgttcc tttacgagaa
      181 attgaggtat taaaaatatc catcaacata tccccatgta attatccata tcccgacgta
      241 gggcgatgac ttttgtaccg ataatgactt gtaaggtatt ttgatcaagt ttcacaaccg
      301 caattcctcc ggcccttttt attgcagcct catctatcaa tcccatatcc gcgatagtta
      361 aacgcaaacg agttacacaa ttatccagtg atttaatatt ttctttacca cccagagcct
      421 taaccatttg ctccgctgcc tgcaactctg atttatcatg aactgggatg ttagctattg
      481 cagtttcttc gtgagcgttc agcgtgacag gactggactc ttcacggcct acagtcatca
      541 ggttaaattt gagaatggtc caacggaaca caaagtaata aatgaagaaa taagccactt
      601 caacacatac cgctaatggc catcccgttc ttgtgccacg taagacacca aagctaataa
      661 attgaatcag atcgccagta aagcccatct tcacgcccat atatggcaga accatgttag
      721 ccaatccatt cataaaggca tggaagacaa acaacagcgg gctgacaaat aagaacagaa
      781 attcaatcgg ctcgctgacg ccgccaataa ttaccgtgag cacaccggaa atcagcaatg
      841 ctttgatagc ccttctgttt tgagcatgag cagtgcgata catcgccagc gcggcgccag
      901 ccagaccata ctgaatcatc agtttgccct gctccatttt ccccgccaaa tccagcggaa
      961 tgaccgcatt ctctttgacg tatgccataa acatgttcag ggtgccgtaa tactcttcac
     1021 cgccaatcac tgccgatccg ccgattgggg taaagcggaa aactgatgtc accaagtgat
     1081 ttaagccaaa aggtatcgtc acgcgttcgg caacagcata gaagaaataa ccaacaggac
     1141 cggaagttga aatccagtga ccaatgagca tgaaaagatt gaaaaatggc ggccagataa
     1201 aaggaatgat cagaccaaat ccactcatca caatcagtgt aatgataggc acaaggcgtg
     1261 ggccactata aaaccctaat gattcaggaa tacgtaagtt aacgatcttt ttatacatgc
     1321 tggcgactaa taaccctgcc acaatcccac ccaacacgct ggtattgtag gactggatcc
     1381 cgagtatgat ggtttgccca tgtgtcgaca tttggtcagc agctaccaat aagtcgtgct
     1441 gtttaagata aaagttcgtt ccaagatgca tcgccataaa gccaattaag ccagaaaaag
     1501 cgccataggc tttatcatct ttctctttta ataatcccaa aggtatagct atcgcaaaca
     1561 atacaggtaa attaacgaag gcaaacaaac caaggctaac aataaaatca agtatggttt
     1621 taattaacgg aatagccaac actggaatga attttgccat atcatcgctg gctaaaccac
     1681 ttcccagccc taacatcata ccacatacac ttaacagagc gatgggatac ataaatgcct
     1741 acccaggctc tgaaaaaaac tccaggattt cttttgtttc atactggtta tctcatgaaa
     1801 atgttatgta taattagtcc attaatactt tgatgcgaat agaaagatat agtttctctt
     1861 ccagaatcaa atcatattta aaagttgcgt acagatatct ttcaatttca tgaatggcac
     1921 gttgtaactg aaaatctttt tcaagaaact gctcatagat atcaccaata tttttctgtt
     1981 ttattttttt cattacataa cacacgacta gaaaaatatt taaggtgcat cataaatctg
     2041 gagtagttaa atgaacttct gtccaccctt ctgttataaa caacttcaat aagctccgtg
     2101 attttttgag acagctcaat aatccttact gattcataat caactgaatt ttcataatta
     2161 tttaaaatat gcaatgctat aaaaccaatc tcatcatccg gtagttgaac gctaaattgc
     2221 tcattaatga ttgttaatgc atcacgactt attgcatact ctgctttgta caacgctttg
     2281 atttcctcaa ggaaaacatt attaatttgt atgcctgaga cgactcggga tattgcattc
     2341 gaaatgtgat cagcaagaat cagtagtagc gatggattga gttttttttc gagattactc
     2401 tccgcataat gcactatctt ttcggcaaca aaaatatact caatacccac atgctcaatc
     2461 aatttgtaga gtttattttt ttgctcattt ctgacataaa aaatccggtt tgcaggatgc
     2521 tcagggaccg acataccata ttttttattg taaccaacgc caggcccaga aatgataacc
     2581 tcctgtccgt tcaccgatgc ctgtacacaa ttattgttca tgactttttc gatgatcatt
     2641 ccatggctcc caaaaaaaaa gcaaggcatg tcagaagtaa taattacttc aaacattgcc
     2701 ttgcctgatt taacagttac aagataatta actaatgcgt atactttaca cggaattgtg
     2761 cttaataaaa gagatgacag acttattttt taagccgata ttcaaatatt cgacagcagt
     2821 cacaaaacca tcgttcaaca tttatgtaaa taatatttat tcaatgaaac ataaattcat
     2881 tgaataaatt aaaaacatca tccccttctc gccagcgtcg ccccatcggc aaaatacgct
     2941 ttaatccccg caagaataga ctccgcaact tcctgctgga aagtcgccgt tttcagttta
     3001 cgctcttcct caacgttact gataaacgcc gtttcgacca gaatggaggg aatatctggt
     3061 gcctttagta cggcaaaccc ggcctgttca acttgatttt tatgcagctt gttgatttta
     3121 ccgagcttat tcagtaccgc tttaccaaac ttcaggctgt cggcaatggt cagcgactgc
     3181 accatatcga acatggtgtg gtcgacatag cggtcaccgc ttttgctcac gccaccaatc
     3241 aagtccgagg cgttctgggt ttgtgccaga tattttgccg cagtactggt tgcacctttg
     3301 gttgagagcg caaacacaga ggaaccgctc ggctgacgac tggtaaaggc gtcggcatgg
     3361 atagagacaa acaggtcagc acgctgtttt tgggcttttg ctacgcgcac ttgcaacgga
     3421 atgaagatgt cttcattgcg cgtcatgtac accttcatat tgccctcttt ctcgatcaga
     3481 gagcgcagac ggcgagctat ttgcaatacc acgtcttttt cgcgcgtttt gtatttcccc
     3541 accgcaccgg agtcttcgcc gccgtggcca gggtcaagca taataacaat aggacgatcg
     3601 cgccctgctt tacccggttg tggaccactt tgtgctggcg gcacctgctt ttcgaggtcg
     3661 cctttgttgt aatcctccag cagcgccagc agcgggtcct gcatatcctg tgcattggcc
     3721 ggatagaggt ccatcaccag acgctcttta aacccggcga ccggcgcaag ggcaaacagc
     3781 tgcggtttta cgttttgctt taattcaaaa accatccgta cggtctgcgg gtcaaattgc
     3841 ccgacgcgcg ccgacttgat gaacgggtcg tctgcacgaa tttgtgccgc catccccttg
     3901 agtaccgagt tcaggtttac atcttcgata tccaccacca cgcgttcagg gttactcaac
     3961 gcgaactgct tatatttcag ctgacgattt gattctaccg tcacacgggt gtagctggac
     4021 gcaggccaga cgcgcaccgc cacgacctgg ctgaccgcag ccagactgac ctgacttacg
     4081 ctcaatagcc acatggcacc cgcgccttgc agtaaacgac gacggctgat tgcagtgttg
     4141 gatcctgaca tgcctctccc gagcaaaaga aatctaagct gtgtaacaag taaacgacta
     4201 atttgaccgg aaactttagc gaaagacgca taatctgtca tctaataaac ggtaaacatt
     4261 ctttttatat tcacggcatt actgataaaa aagtcgctct cgcataaaat ttacacttgc
     4321 accctgcgaa aaacagaata aaaatacact aatttagaat aatcatgcaa aggggtgtgc
     4381 cgtggtaaag gaacgtaaaa ccgagctggt cgagggattc cgccattcgg ttccctatat
     4441 caatacccac cggggaaaaa cgtttgtcat catgctcggc ggtgaagcca ttgagcatga
     4501 gaatttctcc agtatcgtta atgatatcgg gttgttgcac agcctcggca tccgtctggt
     4561 ggtggtctat ggcgcacgtc cgcagatcga cgcaaatctg gccgtgcatc accacgaacc
     4621 gctgtatcac aagaatatac gtgtgaccga cgccaaaaca ctggaactgg tgaagcaggc
     4681 tgcgggaaca ttgcaactgg acatcactgc tcgcctgtcg atgagtctca ataacacgcc
     4741 gctacagggc gcgcatatca acgtcgtcag tggcaatttt attattgccc agccgctggg
     4801 cgtcgatgac ggcgtggatt actgccatag cgggcgtatc cggcggattg atgaagacgc
     4861 gatccatcgt caactggaca gcggtgcaat agtgctaatg gggccggtcg ctgtttcagt
     4921 cactggcgag agctttaatc tgacctcgga agagattgcc actcaactgg ccatcaaact
     4981 gaaagctgag aagatgattg gtttttgctc ttcacagggc gtcactaatg acgacggtga
     5041 tattgtctca gaacttttcc ctaacgaagc gcaagcgcgg gtagaagccc aggaagagaa
     5101 aggcgattac aactccggta cggtgcgctt tttgcgtggc gcagtgaaag cctgccgcag
     5161 cggcgtgcgt cgctgtcatt taatcagtta tcaggaagat ggcgcgctgt tgcaagagtt
     5221 gttctcacgc gacggtatcg gtacgcagat tgtgatggaa agcgccgagc agattcgtcg
     5281 cgcaacaatc aacgatattg gcggtattct ggagttgatt cgcccgctgg agcagcaagg
     5341 tattctggtg cgccgttctc gcgagcagct ggagatggaa atcgacaaat tcaccattat
     5401 tcagcgcgat aacacgacta ttgcctgcgc cgcgctctat ccgttcccgg aagagaagat
     5461 tggggaaatg gcctgtgtgg cagttcaccc ggattaccgc agttcatcac ggggcgaggt
     5521 tctgctggaa cgcattgccg ctcaggcgaa gcagagcggc ttaagcaaat tgtttgtgct
     5581 gaccacgcgc agtattcact ggttccagga acgtggattt accccggtgg atattgattt
     5641 actgcccgag agcaaaaagc agttgtacaa ctaccagcgt aaatccaaag tgttgatggc
     5701 ggatttaggg taagcgatga aaattgtcgg atgcgacatg cgtaacactc gtgcgtcgca
     5761 tccggcaatt acgtttattc ccgcgaacta aacaacgccg ccagaccact gcgccgctca
     5821 gtacgagtgg cgattgccgc acttaatata cgctcatcgg catacagcga cagacggcga
     5881 cgcgcgcggg tcaccgcggt gtataccagc tctcgcgtta ctaccggcgt gcgttggctc
     5941 ggtaaaatca acgccgcatg gtcgaactcc gatccctgcg atttatgtac cgtcatcgcc
     6001 cacgtagttt cgtgctctgg caagcgactc ggttgcacag acttaatatt gccgtccggc
     6061 atcgcaaacc agacgcgcgt cccctgcccg cgatccagtg caataccgat atcgccatta
     6121 aacaacccaa gcgcgctgtc attacgggca atcatcaccg gtcgaccttc gtaccaacga
     6181 gagtgcggat gacgatgaat tttgcgcttc tgttgcataa actgctcaat tcgctcattc
     6241 agtccagcca cgccaaacgg cccttcccgc agggcgcaca aaagttggta ctcattgaac
     6301 gcctgaatga ttaaatccgg ctcggcacgc gcttgcagca gatccagata acgtccataa
     6361 cccgcaagag cttcctcaag catcgcaata taatcttcgc cgctctgtaa aagtcgtttt
     6421 tcgatatcag taaaatcctg ctgaaaaacg gttttcactg ccgttttatc accacggttg
     6481 atcgccgcag ctaactgacc aatgccagaa tcgctgccga aacgatagct tttttgcagc
     6541 aggcagagac tgtcgcgcaa agatgccgct tctgtgccgg ttcctgccgg aacgtgagtc
     6601 cccgtcaggc ggcttagctg cctggcacgc tcggcggtaa agcccgcgtt ggcataagcg
     6661 cagatatcgc ccagcacagc cccagcctca accgaggcca gttgatcacg atcgccgaga
     6721 aagatcactc gcgcatgatc gggcaaggcg tcgatcagtc tcgacatcat aggcagatcg
     6781 atcattgacg cttcatctac caccagcaca tcaagatgca gcgggttacc ggcatgatga
     6841 cgtaaacgct ggctacccgg ctgcgcgccc agcaatcggt gcaaagtgct ggcatcttcc
     6901 ggaatgcgtt tcttttgttc atcggtcagc ggtaactgtc gcaaagcctt gccgagagat
     6961 tcggttaagc gcgcggcagc tttacccgtt ggtgcagcca gacggatacg gcagcgttcg
     7021 ccgtcggcca tttgaattaa cgctgccagc aacttcgcca cggtggtcgt tttaccggtg
     7081 cctgggccgc cggaaatcac cgagatccgc cgcgtcagcg ccactgccgc tgcaactttt
     7141 tgccagttaa tttcatcgct tactggaaaa agtttgtcca gggtttgcgc cagtagagct
     7201 tcatcaacct caatggcatg attcacctca ttgaagaagc gcgctaccgt ccgctcgtta
     7261 caccacatgc gattcaaata aagacgatcg ccacagagga tcatcggcgt gggttcatct
     7321 cccctgctga ccgcttgaga agccagcaag cattcttccc aattttgtag ctcaccgatt
     7381 tcactgacac aggtcgccaa cagcggatgc gacgcctcgt tattttccag tcgtgaaagc
     7441 ggcaaacaga cgtgtccctc tccggcatca tgacttaaca gtgccgccgc gagggtgacg
     7501 gcaggatgtt catctcccgc cacggtcagg gcaaattgca catccagcgg gcgtagctgt
     7561 ttgtgctcca cagcttccag taattgcttt tgcaatttca ttacgcctcc tccagggtca
     7621 taccggcaaa catctcatcc atcagggcaa tcaacccggc gttgggtcgg gttgtgtaaa
     7681 tcccttgttg cggatgttct ttatcaacgc cacgcaggaa cagatagata acgccgccaa
     7741 agtgacgatc atagtcgtaa tcagcaatgc gatggcgcag ataacgatgc agcgccaggg
     7801 tataaagctg atattgcaga tcatagcggt gtgcctgcat cgctgctgcc atagcctgtt
     7861 gggtgtaaac cgaactgtct tcacccagcc agttggattt atagtcgagc aggtaataac
     7921 gcccttcgtg gcggaatact aggtcgataa agccttttaa catgccgcgt acctgcatga
     7981 actccagcgg cgggcagcca gcggatagcg ggtcaaactg gcgaattagt gcatcaagct
     8041 ggctggcgat gagcggttcg ctaatcggca ggtaaaactc catctccacc tgtttatcgc
     8101 ggtcggaaag ctgactcagg ctaacaccct tttcattgag aggtgcctgg aggacagccg
     8161 tgatccactc ggtcaacatc ggttcccact gcgattcaaa gccgccgagt tccagttttt
     8221 cctgtaccca gttcgggtca accggctggg taaaatcgag gtcttcaaac aaactgtgca
     8281 agaatgtccc cggtgacgca ccgcgcggga actgatgcgg tgttaacgtc ggttcttcaa
     8341 cgacgctgac cacgcctgcg gcatcaacat ccagccgtgg catcagatcc tgagcgatac
     8401 cgtgaccacg ctgctgcaag ccggagtagc tggtgacacg ccagttatcg ccgggcaatc
     8461 gttgtagtgt cctcgcattc agttctgcag ttaaagcatc attaacctgc cagggctggt
     8521 tatcaccagt ttgtgccgtt tgccaggcaa tatcatcatc gcataacgct tcaatacagg
     8581 tgcgaagccc tgccgcatct tgcggttccc ctttttgcag caaacgcccg agcgcacttt
     8641 ggtggacgtc ggtgtcacct tttttatcgc cacgacggcg caccagcggt gcaacgccga
     8701 gactgcaatg ccaaaccgaa cgcgttagcg ccacgtaaag caaacgcaga tcttccgcca
     8761 gacgttcgac ctccgcgagg tcgacgcttt ttggcgcagc attaagatcc aaaactgcct
     8821 caaacgagtg gcgatcgtga taaaacgcct gatcctggac gcggaaattg gtaataaatg
     8881 gcaaccagac cagcggatat tccagccctt tcgatttatg gatcgtgaca atctgcacca
     8941 gatgtttatc actttcgagg cgcatttgtt ggctggaggc attactgtct ggctcgagga
     9001 tatgttgcga taaccagcgt accagcgcat gttcactttc cagctgcgtt ccggcttctt
     9061 gtagcagttc gctgatatgc aagatatcgg taagacgccg ctcaccgcct gccgttgcca
     9121 gcaagttttc tgcaatgtta cgcgccgaca tcagcgcccg cagcatcggc ataacgccac
     9181 gtttgcgcca gatttgccga taaccatcga actcttcaac taccgcatcc cacgcatgtt
     9241 cgtcattatt cagcgtttcg atatccagcg cgttcagccc catcattgac gttgccagcg
     9301 cactacgcag ggtgttctca cgttcgggcg tcatcaccgc ctgcaataac caaagcattt
     9361 cctgcgcttc cagagtttca aaaacactgt cgcggttcga aaggtaaacg gaagggattt
     9421 ccagcaacgt taaggcatcg cgcacctggg cggcctcctg gcggctgcgc accagcacac
     9481 tgatgtccga agcacgcacc ggacgcgcgt cgtcgccgtt catcagcaac gcttcgcccc
     9541 gctgtccggc ttgtagccag tcgcggattt gcgcagcaca tacctgcgcc atggtacttt
     9601 gatagtcgcc aacgccgcag ctttcgcctt ccatcagcca cattttcatc gcaggctgcg
     9661 tttcaccttt aaatacaaaa cgtaacgcct gatttttccc ggctgatttc actggaataa
     9721 acggtatttc gcgaaacatg aacgcgtcat cagtctggct gaaaagcttg ttcacactgt
     9781 tcaccattcc aggtgcggag cgccagttgg tgtctaaagt gtagtgggcg tgaacttcac
     9841 tacgcgcctt catataagtg aagatatccg caccccggaa tgcatatatg gcctgcttcg
     9901 ggtcgccaat cagcaacaat gcggtttccg gctgatggtg ccagatacgg cgaaaaattc
     9961 ggtactgctg ggggtcggta tcctgaaatt catcgatcat tgccaccggg aatcgcgtac
    10021 ggatcgccgc tgccaacacc tcaccgcttt cgctacgcag cgcggaatcg agccgactta
    10081 acatgtcatc aaaacccaat tcgccacggc ggcgtttttc acgcgctact gtttcgcgga
    10141 tctcagccaa tgcgcgggtg atcaccagat cgcggatcga caatggttct gcaagcagtt
    10201 gatcgatcgc ctcaaacagt ggatgtcgcg gggtttcccc cccggctttc gtgcgatctt
    10261 ctaagaaacg ctgggagaat ttttccagcg actccggcaa ctgataactg ttggtctctt
    10321 cttctgccca ggcgctgatc ttgtcgatcc atttagcctg attgctacgg ttaaacttgc
    10381 gtcgatcaat accagaagat tcgatcagcg catccagttc acccactgcg tcgcgccact
    10441 gctgttttac cgtagcaata cgcgccacaa tttgcgcgtg gcgggaagcc agcgtttcat
    10501 catcgggcgg cggtgctttg ataaccggcg cttcgccttg cagataacga ttaatatcgc
    10561 gcagcaacgc ctgcggccct ttccaggttt caaagacgac ctgggctatt tcacgcggca
    10621 gcgggtagca gtggcgacgc cagaaatcgg cgcaggcctg gtaacgtagc agagactcat
    10681 cttcaatcag ctgctgctca aacagcatgc cggattcaaa ggcattcagg ttgagcatgc
    10741 gctggcaaaa accgtgaata gtaaagactg ccgcttcatc catctgccgt tcggctaaca
    10801 acaaccactg cgcggcttgc gctttatcgt cgatctcttc cagcagacgt tcgtacagtg
    10861 gattgtcggt agtttcacgc agacaggcga tgcgcaactc atggatattg ctacggatac
    10921 gaccacgcaa ttctgccgtg gcagcctcgg taaaggtgac caccagcagt tcttcaacgg
    10981 tcagcgggcg gggaaaggcg gcggaaccgc ctagtccaag taacaggcgc aaatagagcg
    11041 ccgcaatcgt aaaggttttg cctgtgccgg cagaggcttc aatcaggcgc tcaccctgta
    11101 agggcaagcg caaaggatct agtgtctcgg cgacatcact cattcttttc actcatcagg
    11161 ggcattgttt gctgcaacgc gctgacgttc tcccacactt tccagccttc agggtgtaca
    11221 tattcggctt tcccgttctg gctgccggaa atctgcgaca gaatagccat gccttgcggc
    11281 tcgaccaccg cctgatggaa gaaatcagca agtttttgcg gcgtcagcag ttttatctgg
    11341 gccacgattt tatcacgcga atcgaagcgc atattgccgc gatcgaaatc tttacttaac
    11401 ttcgatgctt cttcgccgag cgtttgcggt gcctgcagca tctgggtaat taccgcctgc
    11461 tggatttgcg caaactcatc tggcttcatc gctcgcaatt ttgcctctgc ggttgggaaa
    11521 aacgccttgt aacgctccca caagaatgaa ggctgtttat cattgctttg caaaaggaag
    11581 cccatgcccc actgacgccc cacgctcatt ggaaacgcaa acacggcata gcccaattgt
    11641 tcttcggtac gcaactgatt gtagaaccac ggctgtacga tctgccccaa cagagagcta
    11701 taggctgagc tggtgtattc atcgtagcca gtcggtacaa ataccgctgc cagtgcggag
    11761 tcggtgctgt taccggcttt ttcaaagatg acggattgtt ttttatcgac cactacatct
    11821 ttgtttcgac accactctga accatcagcg cccaactgtt tttgcacatc gcgtgcctgc
    11881 gttgttgcct gggcctcggt catgttgccg ataaccataa actctggtcg agcccctgat
    11941 tttaaggcgt cgcgataggc cagcacctct ttcaacgtaa tggagggcaa aattttacgc
    12001 cgttcatctc gcgagaagta cggcacttgc gagagcatct gcgcgggcat aatcgcctgc
    12061 tcaaacgctt tacccttttc tgcggaatcc atcatctggt tataccaaga cttcgcctgc
    12121 tcaagctgat cttccgtagc ggtatagcta aagtacccct cgagcaatgc ctggaacagc
    12181 tgcggcagac gctgggtgta accattagca ttaaccataa ggccgttgtt agcgttggtg
    12241 gaaaaactta tgccaccaac cgacgcctgg ttgcttaact gatcaagcgc cagccctgcg
    12301 agataatcat tgagcgcaaa catcacctga ttgcgggcgc tgtccatggc tttcggatta
    12361 cgcaaaatca ggctgacatc agctttgggt tcgctggaaa aataacggct tggcgcatac
    12421 accacgcgca gattcgactc atcaacaatc agctctggat ggtcatattt cttctctgac
    12481 ttaatcagcg agaaatcgtc aggaatatag gggttaagct ccggtaagga gagcgcaata
    12541 ttggcagctt tttgctgcca gtcagcgaaa gtttgttcgc tgattttatc gacctgatac
    12601 ggcgcatcga caaaataagc cgttttattg tgcggctctt tcgggctgat ataccagata
    12661 cgcgcattct gcggcgtcat catcgccaga cgttctttta ctgctttagc atcgtaccga
    12721 tcggcaatat tgactgcatc cagcgtatgc tcaaccggaa cgcgaatcat ggtatctgcc
    12781 agccattcga cgtaatccat atcacgggtg atcgacggat aacggaagtc gatatccagc
    12841 acattcgcca gttcatcgaa gtattgttta tcaatgcctt tttcacgtaa cagattgaga
    12901 tagctaaaaa ttgccgccac aacctgatcg cgattagcca ggcctttatc ggttaaagac
    12961 gcagagatcg ctaatacgcc gctgttgccg ttgacgatag gatcggagtt ggcgctaatg
    13021 ccctcaacta atccctgctt ttgcagccag tcggaaagtg tacctgggct gcgattacca
    13081 atcagatagg taatcaattc atccgtttta ctacggaact tcgctgagtt gttatcgatg
    13141 cgaaactcaa cgcgcagaac tttacgcggc agtgccggga cgtaatgaat gataatgccc
    13201 ttttgcgcgt cggtgactac cggcacggtg atttccggtt ttttgctctc tttgttcggc
    13261 acgcgaccaa aggtgtccgc cgccattttt gccaactccg gcagcggttt attgctgtaa
    13321 ataaccgcct tcatcagatt ggcggaatag tacttctcgt ggaaatcttt cagcgcctgc
    13381 tgcaccggat taccaggttt atcgcttaaa gtttcgaggt taccaccaga aaactttgaa
    13441 ccggggtgtg ccgggttaat ggtttctgcg ctgacctgtg ccatgcgcat cccgtcacgc
    13501 gtacgcgcca tggttaattc agcgttcacc gcattacgct cacgttcggc atatttcttg
    13561 tcgagcaaag gttcagcaat agcatcggcc aggcggtcta ccgcaccagg caaggcgtcg
    13621 ttctcaactt ccagatagaa agccgtgcga tacggcgcag tgctggcatt gtgactaccg
    13681 ccgtgcattt tgagatattc ggccagactg tcagcctgcg ggtacttttt cgaccccatc
    13741 agactcatat gttcaaggta atgtgccagc ccctggtacg cctcgggatc ttccagcgac
    13801 ccaacgggca ccaccagcgc cgagagcgat ttaactgcct gcggatcaga aaccagcaag
    13861 accaccatac cgttatccag acgtatagcc tgatactggc ggttatcttt atcactttta
    13921 cggatggttt cctgaatcgg ctgccatccc gtttctgcct gacttaaggg tgcccaaagg
    13981 gcaactaaca acaataatgc tttgaaccaa gtgctgcggg gcattcacgg acctcataat
    14041 caacttaatt ttctgtccag attcaacacg ttaacgcaaa tcatctgcca gaatttaatc
    14101 ttgtgctgca cgagtcagcc tatgtttata taaccatcag tccgtgactg gtgcgcatca
    14161 taaagtaagc ggatagattg cgcaattttt atacagcact catgactgat taaagcgaaa
    14221 cagcggtaac aggaaacgtt gcgactgttc aacgatggcc tccattgtct ctggtgttaa
    14281 ttgccgccag agcctttgat accagatatc atcaccttcg ccacgcacca tcatgttgcc
    14341 ttcgtaagcc tgaaggaatt tcgtacgggc tttttgcaac gtggaatcgt catccagcat
    14401 ggcatcgttt tgcgcgtcat aacaggtttt tagccacgcg ccgccacttt caggtaacac
    14461 cagcaatggc gcggacatcc cttcacgata cccctcaatc agttgtgaga ggtaatgcaa
    14521 agcctgttcg gctgcaagcg gcggaaaacg ccactcgccg tctttgcgta gaaaaaggcg
    14581 actttcacca ttaccaccgc tggcacagta gacaaggtgt tccagccaaa gttgcattcc
    14641 ctgcgccaca cttaataaag agggatgcca gcgcaacagg ccatccggct gcacctgcgg
    14701 caaccagcca gttatctgca caccgttgca ggcgagatca atttccatac tctgccccgg
    14761 ctggcgacag gcaatgactc tgtcggcaag ctgctgcatc tcctggcact gagtttccca
    14821 gaaaatttca ccaaaagcgc catacggtaa atcccctgcc gcccggaagc gacggaacaa
    14881 gcgttcggca tcatcctgct caaccagtgc attcaataac tgctgattga tttgataacg
    14941 gctaagccct tccagaataa atggctcggt gtcggggatt tcgctgtctt cggtacggaa
    15001 gttcacctgc aaacgcatct ggaaaaatgc ccgcaccgga tgtgcccaga atcgttgtag
    15061 cgtttccagc ggcacggttt ccggtaaggt aaacggcagc ggctgaacaa attcagaatg
    15121 tgctttacca gcccggctgg ccgcaggtag ccattcacga gcatagcttt gtcgttcgcc
    15181 tggctggtag ttttgtggat caaacggcat ccgggtatgg aggcaggtaa gatgcgcttt
    15241 tacccttgcc tcgctttcat cacagttgag cgcttcatcg cccggtagat aatgactttg
    15301 cccgatgtag tcgatcagtt cctgcaccag taccgacggg aaacgttcac tgttatcctg
    15361 aatggaaagc ccgatataac tgatatagag tttttgctgc gcggaaatta acgcttccag
    15421 gaacaggtag cggtcgtcat cgcgacggct acggtcgcca cgcttcggtt tctggctcat
    15481 caggtcaaag cccaatggcg caagctgacg tggataaacg ccgtcgttca ttcccagcag
    15541 gcaaaccact ttgaacggaa ttgaacgcat tggcatcaga gtacaaatgt taaccggtcc
    15601 ggcgagaaaa cgctggctga tacgttcttg atccagacgc tgtgccagtt catcacgcaa
    15661 tagtgacagc ggcaccgcgt cgccatactg cgcacctaaa ccttcggcga taatcgcctg
    15721 ccattgttgt tcgatcagcg tcatcgccgc ttcggtttcc gcatccggca ggaagaaggc
    15781 gttgagcata tcgcgacaaa ccggcaacca ctcttctagc ggacgctcct gtgccagccc
    15841 gcgatgccag atgtttagct gcattagcag tgaagccaga tgccccacca gttctgcaat
    15901 taagccgctc gactcatcat aaggtagaac cgattgccac tcgccctgcg cgctctccat
    15961 cgcgtagccc agcaacatac gcgtcaggcc aaatcgccag gtgtgttgtc cggtggcggg
    16021 gagttccagc tcgcgaacgt tgtcgtcatc tatcccccaa cgaatgccgg attcgttgac
    16081 ccactggcgt aaataacgca gcccttcttc ggtgatgtca aaccgcgccg ccagcaccgg
    16141 cacatccagt aatgccagca cgtcttccga cacaaagcgg ctgtctggca acgataacag
    16201 gctgataaac gcttccagta ccggatgcga ctgccgcgcc cgacggtcgg aaatggcgta
    16261 aggcaggtaa cgatccgcag gtgcgctacc aaacacagcc tgaataaacg gactgtagct
    16321 gtcgatatca gccaccatca cgatgatgtc gcgcggagta agtgtcgggt cttcttccag
    16381 catcgccagc aggcgatcgt gcaaaacttc aacttcacgc tgcgggctat ggcaaacgtg
    16441 gaaggtgata ctgctatcca gtggatcaag cgggcgtttg ttatcgctac gggaaaactc
    16501 ttcgatgttc acaccagcaa cggcacggtt ttccagttcc agaatgtcag actgaatgtt
    16561 atgcagcagg ttatctggcg tgacatcgac aaaggcgtcc agctcctggc tgctctccag
    16621 gtcagaaagg agataaatgt agtcgcgccc aagcttcccc catgaggcca gcagcgggtt
    16681 gtcgacatcc tgttcaccat cgctgttaaa gagctgtccg gcattttcgc tatcgcgaaa
    16741 tagcggcaat tcgcgatctt caaaactgtg tcgacgctga cgagtcagca gtttcgccag
    16801 ataagcagga tctttaatat cgccccagta ataacggcag gggttggtaa acaggagatg
    16861 gatttcaata tgtttaccca gcgcctggag cgcctggaga taaacaggcg gtaacgcgga
    16921 aataccgcat ataaagacgc gcgaaggtaa ccccggcggg caggtcgtcg cggactccag
    16981 cgtttcgata aagcgctgat agagattcgc gcggtgccag cgcggttgtc cgagttcatg
    17041 ggtatattcc accagcgcct tccacaacgg cgcttgccag gcctgtgctt ctcccagccc
    17101 ttcaaccaaa tgtcctgttt cccattgtgc cagccactcc gggcgataga ccagatactg
    17161 gtcaaacagg tccgccgctt ttgaggaaag ctggaacagt tttcgcttgt cgctatcgtc
    17221 agtcagataa tgccgcaaca gggtaaagtc ttcgtgctcc aacagttgtg gcagcagagt
    17281 catcagtttc cagctcatgc tctgtttgtt aaaggcgctc tctttgggga tctccggtaa
    17341 cacccggacg aacatatccc agataaagct cgcaggcagc ggaaaatcaa tgtttgccgc
    17401 aataccaaac ttttgcgaca gggtcatttg cagccactgt gccataccgg tactttgcac
    17461 cagaatcatc tctggttcga aaggatcgtc cagccgttcg cgttcgacaa taaactccat
    17521 caacgcttcc agcacgtcca gacgattgga atggtagacc cttaacatag cggctcctga
    17581 ctactgacga ttcgggcaat gcaggcgggt catctcgcct tctctgcccc cgggtgaaac
    17641 tagcgtaacg ctgatgctga cacatcccgc ctgcgatgtc tgcaatcggt tgacctgcca
    17701 gttagctggt ggcgaaatcg cgcgcagttg cgtttgctgc cagccatgcc gccagagctg
    17761 ttggtactgg tttctgctgg caagactgtt cattaatgtt cgctggaaac ccgataacgc
    17821 agtgacaatc atcaccatca acaccatcgc caacattacc tccggcaggc taaagccttg
    17881 ttgattcttc agggaagctg acataacgcc ctctctttca gcggacaaaa atcgctccag
    17941 ccgcttggcg aaaaaacaat gtttccatca atgacttcgt ctgttcgcca caacgaaacg
    18001 ccttcataac cggcaatcaa taaggcttca ttatctgcca gtaaacgcaa acaaacctgg
    18061 gcatcggttt cagcgtactg cgagcactga actgctggct gcgtctgcca ggagtgcatt
    18121 tttccccacg ccagcgccga ctgaacgatg gcctggcggc gcaatgactg actttccatg
    18181 ctcacgcgag aggcaaaact gcgatcctgt tggctcattc cttgtaatag caaactaccc
    18241 aaaaccagca gcatcaggac cagagccagt gacgaaacac ccttttcgcg gttcacaggt
    18301 tgaatcctgt cacgctatag ctggcattca ccacggtttg cggttcagac ttactggcag
    18361 cacgcatatt aaccgtcaac accggcgaga agccgctgac atcctgacgt acgacctgaa
    18421 aagtgtcgat aatgatggca tccggattag tgactttatc ccagccctta ccttcacagg
    18481 atgtcgcacc gcgtagcgtt tccagcacat gctccttcag acgaaatcca atctggtcgg
    18541 actcttttac cggttcgcga tcccagatac cgttactgtt cgcatcccac tgcacaatga
    18601 tacagtcacc ctgtccgaca atttccagcc cttcgccggt acagatgcca tgacaataac
    18661 ccgccctctg gagatgcttc gcgacggtaa atacccgcag ccagatttca tcttccagcg
    18721 ccagcttacg ggtgctcgtt aaactttcac gctgtaacgc aggcagaaag cgtgcagccc
    18781 ccagcaacaa tacgctactg atcgccatag caatcaacac ttccagcaga gaaaaacctt
    18841 gctcttttac aggcatcctt ctgtttctcc ttgctgacaa agccggagtc ttccccacgg
    18901 cgaaaccacc agccaccact cgcccgttga gtttttgaag cgaatatgcc cggcccatgc
    18961 ggtattgcgc aggccaaaga aagcaagcga aggtgtcagg tcgctcattt cgacttcggg
    19021 ccagcgtggc acaaagacca atggtgaact gccatgacag gtattggccc cagcagcgga
    19081 actcacaagg caccataacg tcccctccct gataacgctg atactgtggt cgcggttatg
    19141 ccagttggca tcttcacgta aatagagcaa atagtcccgc gcctggctgg cggtttgcca
    19201 tagccgttgc gactgctgcc agtattgcca gccatagagt ccacttgcgc ttagcatgac
    19261 caaaatcagc atcgcgacca gcgtttcaat cagcgtataa ccacgttgtg ttttcatgcc
    19321 ggcagtatgg agcgaggaga aaaaaagacg agggccagtt tctatttctt cggcgcatct
    19381 tccggactat ttacgccgtt gcaggacgtt gcaaaatttc gggaaggtgt ctcgaagaat
    19441 ttaatggagg gtaaaaaaaa ccgacgcaca ctagcgtcgg ctctggcagg atgtttcgta
    19501 attagatagc caccggcgct ttaatgcccg gatgcggatc gtagccttca atctcaaaat
    19561 cttcgaaacg gtagtcgaag atggattcgg gtttacgttt gataatcaac ttcggcagcg
    19621 gacgcggttc gcggcttaat tgcagatgag tttgatccat atgattgctg tacaggtgcg
    19681 tgtcgccccc cgtccagaca aaatcgccca cttccagatc acactgctgc gccatcatat
    19741 gcaccagtaa cgcgtagctg gcaatgttaa acggcaggcc gaggaaaacg tcacaggagc
    19801 gctgataaag ctggcaagag agtttgccgt ctgccacata gaactggaag aacgcatggc
    19861 acggtgccag cgccatttta tccagttcgc ctacgttcca cgctgaaaca ataatgcggc
    19921 gcgaatccgg gtcgtttttc agctggttca gtaccgtagt gatctggtca atatgacgac
    19981 gatccggcgt tggccaggcg cgccactgtt taccatacac tggcccgagg tcgccgtttt
    20041 catcggccca ttcgtcccag atggtgacat tgttttcgtg tagataagca atgttagtgt
    20101 cgccctgcag aaaccacagc agttcatgga tgatggaacg caggtggcaa cgtttagttg
    20161 tcaccagcgg gaatccatcc tgcaggttaa aacgcatctg atgaccaaaa atggaaagcg
    20221 ttccggttcc ggtacggtcg tttttctgtg tgccttcgtc gagcactttt tgcatcagtt
    20281 ctaaatactg tttcatggtt cctcaggaaa cgtgttgctg tgggctgcga cgatatgccc
    20341 agaccatcat gatcacaccc gcgacaatca tcgggatgga aagaatttgt cccatgctga
    20401 tgtactgcac ccaggcacca gtaaactgcg cgtcgggctg gcggaaaaac tcaacaatga
    20461 tgcgaaacgc gccgtaacca atcaggaaca aacctgagac agctcccatt gggcgcggtt
    20521 tacgaatata caggttgagg ataataaaca gcactacacc ttccagcaac agctcgtaaa
    20581 gctgtgatgg gtggcgcggc agcacaccgt aagtatcgaa aatggattgc cactgcgggt
    20641 tggtttgcag cagcaaaata tcttctgtac gggagccagg gaacagcatg gcaaacggga
    20701 agttcgggtc aacgcggccc cacaattcac cgttaataaa gttgcccaga cgcccggcac
    20761 caagaccaaa cggaatgagt ggtgcgataa aatcagagac ctggaagaag gaacgtttag
    20821 tacggcgggc gaagataatc atcaccacga taacgccaat caggccgccg tggaaggaca
    20881 tgccgccgtc ccagacacgg aacagataca gcggatcggc cataaactgc gggaagttgt
    20941 agaacagaac ataaccaata cgtccaccga ggaagacgcc gaggaagccc gcatagagta
    21001 agttttcaac ttcatttttg gtccagccac tgcccggacg attcgcccga cgtgttgcca
    21061 gccacattgc aaaaatgaaa cccaccagat acatcaggcc gtaccagtga agcgccacgg
    21121 gtcctattga gaaaatgacc ggatcaaact ccggaaaatg cagatagcta ctggtcatct
    21181 gtcaccacaa gttcttgtta tttcgctgaa agagaacagc gattgaaatg cgcgccgcag
    21241 gtttcaggcg ctccaaaggt gcgaataata gcacaagggg acctggctgg ttgccggata
    21301 ccgttaaaag atatgtatat gatccgcgct ataaccctcc gcgaatcagc ccgcccatgc
    21361 cgcgacgctc cataaaggct gcaacctgat gacgaacttc ggtcgccagt tgcgcttcca
    21421 gactacgctg cgcaagattt tctgcttcgg caaaatcaat gcgccgcagc aggtatttta
    21481 cccgcgctac agaacgtccg ttcatagaca gatggcgata cccaagccca atgaggattg
    21541 ccacgcacat gggatcgccc gccatttcac cgcacaaacg gagatcgata ccatgtattt
    21601 ccgcttcccg ggcgatcatt gccagagctc gtaacattgc aggatgaagg ctgtcataaa
    21661 tgttcgccac ccgggtattg ttgcgatcaa cggccagaat gtattgagtc agatcgttgg
    21721 tgccaacaga gatgaaatcg acccgctttg ccagatgcgg cagcataaat accattgacg
    21781 gtacttccag catgatgccg atacgtggtt tgggaatttc gtaaccgatc atctcctcga
    21841 cttcacgtcc ggcacgttca atcaggcggc gtgcttcgtc aacttcatcg aggctggtga
    21901 ccatcggcaa cagaatattc aggttgcccg tagcggcatt agcacgcagc atcgcccgca
    21961 cctggatcaa gaagatctcc ggctgatcga gcgtaatgcg aatcccacgc caacccaggc
    22021 atggattctc ttcgctgatc ggcatgtaag gcagctgctt atctgctccg acatccagcg
    22081 tacgcaaggt gacgggttta tcattgaaca tttgcagcat cccctgatac tgcgccacct
    22141 gttcttcttc cgacgggaaa ccactttgca gcatgaatgg gatttcagtg cgataaagac
    22201 cgatgccatc aatacggctg cccagttttt cttcatgttc cgggcttaaa ccagcattga
    22261 gcatgacttt tatacgctca ccgcttttta actgcgcggg taaattgacg tcatcttccg
    22321 ccagacggct aagctcaatc tcttcactaa ttagccgctg atattcttgc agcagtaccg
    22381 gctccggatc gaccagcaat tcaccgcgat agccatcaac gatcagcgtc ctacgatgca
    22441 gcaccgaagg ctgaatatcc gcgcccatca cggtagggat ccccagcgca cgtaccatga
    22501 tcgcagcatg ggagttggct gcgccatctc gcacgacaac accgactaag cgatcctggg
    22561 gcagctcagc aagagttgtc gctgacagtt catctgccac cagaatgaaa cgttccggcc
    22621 aggcgttcgg cccttgatta gcgtcatcaa gatgaaacag caatcgctga cccagcgcac
    22681 gtaaatcgcc agcccgctct ttgagatagt tatcgcttag cgcggcaaac tgttcggcaa
    22741 atttttcaat gaccgttttt accgcccact ctgccaccga gcctttatca acctcggcaa
    22801 acaattcgcg acgcagccgg gtgtccgaaa gcaggtgcga gtaaagatcg aaaatagccg
    22861 ccgtttcttt ttgtgctccg gcggcaaagc gtttgctgta gcggcgaaac tcgtttgccg
    22921 cttcttccag cgccccggtc aatcgttcgc gttccagagc cggatccagc gttgatgcct
    22981 gatacacctg ttccattaaa ggtaacgtgg catcctgcca gccttcggca atcgccacac
    23041 caggtgctgc cggtaatgcg cggattcgcg tctggcgata ttgcccaaac aaggcagtca
    23101 actgcgactg agaaagaata gctgccatct gggtggcaag cgtcaccagg aaggattctt
    23161 cactttcgtc atactggcgc aactctcgtt gctgtaccac cagtacacca agcaactggc
    23221 gacgttgaat aattggtacg cctaaaaacg cgcggaaacg ttcttctttt acggagggga
    23281 tgtatttgaa gctggggtgc ttttgcgcat ctgcaaggtt tatcggttcc gccagcctgc
    23341 caaccaggcc gacgatccct tcatcaaacg cgagcgttac agtgcgaccg cgtggttttt
    23401 tcagcccccg ggtcgccatc aggtagtaac aacgtcgatc atgatcggcc aggtagaccg
    23461 aacagacctc ggtatccatc gcaagacaga tgtcggtaac cagaatattt aacgcctcat
    23521 tcaggcgtgg tgcgctggct accttttcga ctatttcgcg caggcgagtg agcataattg
    23581 gcgtgactta acctctttta cgtcgataag cagatgtgtt ttgtggtttt ggcgtatttt
    23641 cctgcagtga catcaccaca ctcgcgaact ctttcattac cctacggtag acatcacgtt
    23701 taaatgacac cacctgtctg accggatacc agtaacttac ccatcgccag ccgtcaaact
    23761 ctggtgtact gctggtttgc atattgattt ctgcatcgcc gctcaccagc tgcaagagaa
    23821 accatttttg tttttggccg atacaaaccg gcttcgtgtc ccaacgcacc aaacgtttcg
    23881 gtaatttgta gcgcaaccag ttacgcgttg aagcaaggat tcgaacgtct ttgcggctta
    23941 atcctacttc ttcaaacaat tcacggtaca tcgcctgctc tgcggattct ccggggttga
    24001 ttccgccttg cggaaattgc caggagtgct gaccaaatcg ccgggcccac attacctgcc
    24061 cctggcgatt acaaatcacg atacctacgt ttgggcggta gccatcgtca tcaatcaccg
    24121 gactacctca aaataaagct ttatatacga atgattgttt catactccag gaagacggta
    24181 aaccactctc tgcagggcat tacacactaa taacaattga ataactcaca gttatgtgca
    24241 gagttataaa cagaggaagg ggtggatagc cgtttttatt caccttttct gtggatagag
    24301 ttgtgaagaa ctacggaatt actacgggaa aacccggagc attctgaata agcccgatat
    24361 aggcatttta aaatattcat tatcagtcaa tgcattacat gtaatttgag taatgaaaaa
    24421 gagtaattcg tgacccaggt cacacctctc atttacgggt tggcgaaaga tcaaccaatg
    24481 ccgtatttat ccacagaatg tgccactaag ttaagcactg aaccactaaa aactggagtt
    24541 tcgtcgcacg tcaaggctgt aaatggaaac agtagtggag gtttttcaca gttatcccag
    24601 ctttctgtgg ataacatggt gtaagatcct gtttattttc agtgaccaga tttggaaaac
    24661 ctattgcagt gctgcgcaac tcgattatcg gcagcctaaa aagcaatata aatcagagaa
    24721 ttgaacaaca catgtggaaa aagttacact gcgaatattc ggcacataat tgctgtttgt
    24781 tttttaacca aggtatcatg acatgtccca acctcgccca ctgctctctc ctcccgaaac
    24841 tgaagaacag ttgttagcgc aagcacagca actttctggt tatacattgg gagaactggc
    24901 ggcacttgcc gggctggtta cgccagagaa tttaaaacgc gataagggct ggattggcgt
    24961 gttactggag atctggctag gtgccagcgc agggagtaaa cctgagcaag attttgctgc
    25021 tctgggcgtg gaacttaaaa ctatccctgt ggatagtctt ggtcgtccgc tggaaacaac
    25081 attcgtttgt gttgccccgt taacgggtaa tagcggggtg acctgggaaa ccagccacgt
    25141 gcgccacaag ctcaaacgcg tactgtggat accggttgaa ggcgagcgca gcatcccgct
    25201 ggcgcagcgt cgcgtaggat ccccgttgct gtggaccccg aatgaagagg aagaccgaca
    25261 gctacgcgaa gactgggaag aattaatgga tatgattgtt ctcggtcagg ttgagcggat
    25321 caccgctcgt cacggggaat atttacagat aagaccgaaa gcagcgaatg cgaaagcgct
    25381 taccgaagcc attggtgccc ggggcgaacg gattctgacg ctgccacgcg gcttttattt
    25441 gaagaagaat ttcaccagtg cactactggc ccgtcatttt ctgatccagt agccatcgct
    25501 ttgacctgcc gctttccggg catataatta ccgcttcatt tttttggcag ggctttttag
    25561 atgttatttg catggataac cgatcctaac gcctggcttg cgctcggtac gctgacgctg
    25621 ctggagatcg ttcttgggat cgacaatatt attttccttt ctctggtggt ggcaaagctt
    25681 cccacagcac aacgtgctca tgcgcgccgt ctggggttgg cgggagccat ggttatgcgt
    25741 ctggcgctgc tggcatcaat cgcctgggtt acgcgcctga caaatccgct ttttacaata
    25801 ttcagtcagg aaatttctgc ccgtgatttg attctgcttc tgggtggctt gttccttatc
    25861 tggaaagcca gcaaggaaat ccacgaatcc attgaaggtg aagaagaagg gctgaaaaca
    25921 cgcgtttcat cattcctcgg cgctatcgtg cagattatgc tgctggatat tatctttagc
    25981 ctcgactcgg tgattacggc tgtgggtctg tcagatcacc tgtttattat gatggcagcc
    26041 gtggtgattg ccgtaggcgt gatgatgttc gccgcgcgct cgattggtga ttttgtcgaa
    26101 cgccatcctt cggtaaaaat gctggcgctc tctttcctga ttctggtggg ctttaccctg
    26161 attctggaaa gtttcgacat ccacgtaccg aaaggttaca tctacttcgc gatgttcttc
    26221 tctattgcgg ttgaaagcct caacttgatt cgcaacaaaa agaatccgct ctgatactcc
    26281 gtacgctctc ctgcgggagg gcgtactcac tccttttacc ctcacagttt aagattttcc
    26341 tgctttcaag atatataacg tcggtttata aacagactat tatcataggt aggccaaatg
    26401 aggataaccg gatgaaaaaa tgggcagtaa taatttctgc agtcggactg gcgtttgctg
    26461 tttccgggtg ttccagtgat tacgtcatgg cgaccaaaga tggccgtatg attttgaccg
    26521 atggaaaacc tgaaattgat gatgataccg ggctggtgag ttatcacgat cagcaaggta
    26581 acgcgatgca aattaaccgt gatgatgttt cgcaaattat tgaacgttaa caaataaggt
    26641 cagcatccgg ctggccttaa gatttttctc tttccctttt cccttccctc tgccattttt
    26701 atattcctta tgtcgtgatt ataaaaagga aacggctatg caatatcacc gtatacccca
    26761 cagttcgctg gaagtcagca cgctggggct tggcacgatg acgtttggtg aacagaacag
    26821 cgaagccgac gcccacgcac aactcgacta tgccgtcgct cagggcatta accttatcga
    26881 cgttgccgaa atgtacccag tacctccgcg ccccgaaacg caagggttaa ccgaaaccta
    26941 cgtcggcaac tggctggcga aacatggcag ccgcgaaaag ttaattatcg cctccaaagt
    27001 gagcggaccg tcgcgcaata atgacaaggg catccgcccg gatcaggcgc tggatcggaa
    27061 gaatatccgc gaagcgctgc atgacagcct caagcgccta cagactgatt acctcgatct
    27121 ttatcaggtg cactggccgc agcgcccgac caactgcttc ggcaaactcg gttatagctg
    27181 gacggattct gcgcctgcgg tttcgctgct ggatacgctg gacgcactgg cagagtacca
    27241 acgcgcggga aaaattcgtt atatcggcgt gtcgaacgaa actgcatttg gcgtaatgcg
    27301 ctacctgcat ctggcggaca aacacgatct gccgagtatt gtcaccattc agaaccctta
    27361 cagtctgtta aaccgcagtt ttgaagtagg tctggcagaa gtcagccagt atgaaggggg
    27421 cgaactgctg gcctattcat gcctgggttt cggcacgctg accgggaaat atctcaatgg
    27481 tgcaaaaccc gctggcgcac gtaatacgct ctttagtcgg ttcacccgct atagcggtga
    27541 gcaaacgcaa aaagccgtcg cggcgtatgt tgatatcgcc agacgtcatg gcctggaccc
    27601 tgctcagatg gcgctcgcgt ttgtacgccg tcaaccgttt gttgccagca ctctgctggg
    27661 cgcaaccacg atggatcagc tgaaaactaa catcgaaagt ttgcatctgg agttaagcga
    27721 agacgtatta gctgaaattg aagcggtgca tcaggtttat acttatccgg caccataaga
    27781 ttaacgccgg ttaaaaccgg cgttaaatat taatgacggc gctgccagat ccacagcgcc
    27841 gttattgcca gcgcaaacag cgcaccgaag ccaatgccaa tgggcacgac cgggatgcct
    27901 accattaccg ccagcgagta aatgcccagc atcaacaaca tggcgctgtt ttcgccaagg
    27961 ttttgtactg caatcgcatt ccccgccccg acgctttttt taccccgctc ctgtagcaac
    28021 gcattgagcg gaacgacaaa aaagcccccc atcacgccaa tcagcatcaa caaggcatag
    28081 gctggcagca gctcgtgttg cagggaaaaa atcagtacca ccacgccaat caaaatcccg
    28141 gctggcatac agcgtgacac ggtttccagc gtaactaact tcgctgccgc acctgcgcca
    28201 accacgatac caatcgctac catcgcgttg agataggtgg gcgtagcgtt atcggtaatg
    28261 cccagcgcca ccggtaccca cagcaccaac aggaaacgca gcgtgacacc cgctccccag
    28321 aataaactgg tgcccaccag cgaaaaacgc gtttcaccat tgcgccatag cgaggtgcag
    28381 gcattcagga aactgcgggt catgttgatg agattccagg actgccccgg acgcgccgcc
    28441 gccagtttgg gaatgtagat attggcaacg accgcaccac cgtaggccag tgcgcatgcg
    28501 gccagggcga cgaggacatg ccagtcagcc agcacaccac cggctacgga accgagcaaa
    28561 atcgccgcta tggtagaagc ttccattaaa ccgttagctt tcactaactt actacccgtg
    28621 gttaattcgc cgagaatacc gtatttcgcc ggtgaatagg ctgcagcacc aacccccacc
    28681 agcgtatagc cgagaaacgg attgatacca aagcagatac tggctgcgcc cagcagcttc
    28741 aggccgttgg caaacatcat cacccggcct ttggcgaagc tatccgccac ctgcccgaca
    28801 aacggcgcaa aaagaatgta agcacctaca aacaccattt gcaggatggg ctggctccac
    28861 tccggataga actgcgcttt cagtaacgcc agagtggcaa acagtagggc attatcgcca
    28921 aacgcagaga gaaactgcgc cacgataacc gctttcatcc ccttcgacca caacgaagtg
    28981 ttagtgtgca ctgactcact catcgtgttg ttccgcttcg tctatccagc ttttcaacgt
    29041 gacaaagtca ggtttgccgc tgccaagtaa tggcatctgt ttcagatagc gaatatcgcg
    29101 cggtacagca agctccggca cgccgtgctc gcgggcatac tgttgcaact tatcgcgcgt
    29161 cagttcgtta tctgtggtga acagcaccag tgcctcgcct ttgctggcat cgctcttaat
    29221 cgcagtggca tggactttat ctggcgaaac accaagtgcc agttgttcca ccatttccag
    29281 cgacaccatt tcgcctgcaa ttttggcaaa gcgttttgcg cggccctgaa tctgcacaaa
    29341 gccctgctcg tcaaaacgca caatatcgcc agtgtcatac cagccgcgct ccatttcgcc
    29401 gcgaacattc tcggcggtgg gcacttccag tacacctggc ttctccaccc gcagatagcc
    29461 gttcattatg ttcggccctt tcagttgcag gcgtccgccc tcttcgatac caggaaccga
    29521 caacaggcgc gcatccattc ctggtagaat acgccctacc gtaccgggtt tcgccgccat
    29581 cggtacgttg atagaaacga caggcgcgca ctcggttaca ccatagcctt caaggatgcg
    29641 caggccaaat ttatcctgcc aaagctgttt ggtactttct tgtagttttt ctgcgcctgc
    29701 caccacatag cgtagacgat agaagtcata cgggttggcg aaacgcgcgt agtgaccgag
    29761 gaaagtcgag gtaccgaaca acacggtgca actgcggtca tacaccaact ccggcacaat
    29821 gcggtaatgc agcgggcttg gataaaggaa cacttctgca cctgtaagca gtggcgtaaa
    29881 caggcctacc gtcagcccaa aggagtgaaa cagcggtaat gccgacataa agcgatcgtt
    29941 ggtggtgaag tcggcaatcg ttttaatctg ctcgacgttc gccagaatgc ttttatggct
    30001 atggacgacg ccttttggat ggccttcaga accggaggta aagaggatca gcgcctcttc
    30061 ttccggctgc tgttttacct gcgccaggcg cggcatcagc aaatgagcga agatccatac
    30121 tttgtcggca gtggtgacat ctgcttttaa atcttccaga tagacccagc gcacctgagt
    30181 aagttgctcc ggcagatgcc agagtttgcc tttatcgaga aactggcggg aagtgaagat
    30241 ggttttgatt tcagccgccg taatagcact ggtcagccct tttaccccag cagtgtagtt
    30301 catcattgcg ggaatgcggc gacgcgcgat ggccccaaaa atcactgccg cactgatgcc
    30361 tgcattgggc agcattaagc cgatgcgttc gccttcaaca ctgtattttt caaggatgcg
    30421 tccaacaaac agcgttttcg taagcaattt gcgataggag tctggggtaa agttgacgtc
    30481 ttcgacacat ttcttcccgg ctccgaagcg gtacattgca ctcagtaaag attcgtacag
    30541 agtttcacgc gggcgcaccg ccatacgcgc ttccatcatt atttgatgca gcatttcgcc
    30601 agcgattttg cgacggtcac gggcacgcga cgcatccggc atcgccacct gcgttggagg
    30661 caaaatatgc agagtaattt gcgggaacaa gcgacgttta accagacctt tcaggcggct
    30721 gaagtgcgta agttccgccc cttcaatacg cacaggaata accgttgcac cagacttcgc
    30781 cgcgacaaaa cccgcgccat cgtagatttt catcagcgag cctgtagtgg tgatgcgtcc
    30841 ttcagggaaa atcaccactg gtcggccctg ttccaccaga cgtaccagat gtttaatagc
    30901 cataggttgc gtcgggtcga gaggaacaaa gtcgataaat gatttcagcc aacgcatata
    30961 ccactgttgg cttattgagg tgtaaacggc aaacactgga cgcacaggta aaaacagtcc
    31021 aagcaaaatg ccatcaataa aagagacgtg attaggcgta attagaacgc gctcgccctt
    31081 cagtgcctgg gtgtcacccg taacgcgaac gcgatacaaa acacggcaca aatttcgaaa
    31141 aaagctaaaa agcattccaa ctccctttgc tctgattcag taaaagcgaa tggagggaga
    31201 ttacacgaga taaagaacgc gagcgacagt aaattaggtg cgaaaaaaaa cctgcgcatc
    31261 cgcgcaggtt ggtgcaagag acagggtacg aagagcgtac cgaataatct caccaatcaa
    31321 tacctctggg atcaccactt tagcaacctg aagccaaacg ccaccagcgg tcaatcgcaa
    31381 cagcgtttcg caaagtgtaa ccaaaggttt gcaatctctt tttttgtctt acttatttgc
    31441 gtttggctca cattcccacg atgaaaacac gccacccctt gaaccaacgg gcgttttccg
    31501 taacactgaa agaatgtaag cgtttaccca ctaaggtatt ttcatggcga ccataaagga
    31561 tgtagcccga ctggcaggcg tttcagtcgc caccgtttcc cgcgtcatta ataattcacc
    31621 caaagccagc gaagcttccc ggctggctgt gcatagtgca atggagtctc ttagctatca
    31681 cccgaacgcc aacgcccgtg cgctggcgca gcagaccact gaaacggtcg gtctgatcgt
    31741 tggtgatgtt tccgatccgt ttttcggtgc aatggtgaaa gcggtcgaac aggtggctta
    31801 tcacaccggt aatttcttat tgattggcaa cggttaccac aacgaacaaa aagagcgtca
    31861 ggctattgag caactgatcc gccatcgctg tgctgcgttg gtcgtccatg ccaaaatgat
    31921 cccggatgcc gatttagcct cattaatgaa acaaatgccc ggtatggtgc tgatcaaccg
    31981 tatcctgcct ggctttgaaa accgttgtat tgctcttgac gatcgttacg gtgcctggct
    32041 ggcaacgcgt catttaattc agcaaggtca tacccgcatt ggttatctgt gctctaacca
    32101 ctctatttct gacgccgaag atcgtctgca agggtattac gatgcccttg ctgaaagtgg
    32161 tattgcggcc aatgaccggc tggtgacatt tggcgaacca gacgaaagcg gcggcgaaca
    32221 ggcaatgacc gagcttttgg gacgaggaag aaatttcact gcggtagcct gttataacga
    32281 ttcaatggcg gcgggtgcga tgggcgttct caatgataat ggtattgatg taccgggtga
    32341 gatttcgtta attggctttg atgatgtgct ggtgtcacgc tatgtgcgtc cgcgcctgac
    32401 caccgtgcgt tacccaatcg tgacgatggc gacccaggct gccgaactgg ctttggcgct
    32461 ggcggataat cgccctctcc cggaaatcac taatgtcttt agtccgacgc tggtacgtcg
    32521 tcattcagtg tcaactccgt cgctggaggc aagtcatcat gcaaccagcg actaaccgca
    32581 gttaaagcaa ttccagagcc agtaattctt cgatggtctg gcgacggcga atcaaccgcg
    32641 cctgaccatt atcaaacaga acttctggta acagcgaacg gctattgtag ttggatgaca
    32701 ttgatgcgcc atatgcccct gtatcatgca gtaccagata atcacctgcc ttcacttccg
    32761 gcaaggcgcg ggtttcaaca tttccccctt cctgctgggt aaagacatcg cccgattcac
    32821 ataacggtcc ggcgacgacg gtttccaccg ttggcgcgtg ttccagagaa cgaccatcag
    32881 ctgccagggc actgatatgg tggtaactac cgtacattgc cgggcgcatc agatcgttga
    32941 acccggcatc aaccagcaca aagtggcggc tccccatttg tttgacgctc cgcacctgag
    33001 taattaatac gccagactgc gctaccagga agcgacccgg ttcaatttcc agtttcacag
    33061 ggtggcccaa atggcgggcg atttgctcac gcgcggcatt ccacagacca taataatgtt
    33121 cggtatcaac cgcctcttca ccctgttgat aaggaacaga aagcccaccg cccgcagaaa
    33181 tagcctgtaa atcctgaccg aattcgatga cctgacgcac catagcacca cacacctgtt
    33241 ccagatgggc ataatcaacg ccagaaccaa tgtgcatgtg aatgccgacc agctgcagat
    33301 gatgacgttg tatcacgtcc agtgcggcgg gcagatcggt gtaccagata ccgtgcttgc
    33361 tgttttcgcc accggtattg gttttttggc tatgtccgtg accaaacccc ggattaacgc
    33421 gcagccatac ccgatgccct ggcgaaacct ggcccagttg gtcgagcata tcaacagaac
    33481 ccgcattcac cggaatttgc aattcactga cgcgttcaag cgtcgcctga tcgataacat
    33541 ctgccgtaaa aacaatatca tcggggtgcg tttgcggatt gtaacccgcc gccaacgcac
    33601 gctctatttc gcctaacgag acggaatcca ctttcacgcc ctgctcacgc attaagcgca
    33661 aaatatgaat attggaacag gctttctgtg caaagcgcac cacatcaaac tgtttcagcg
    33721 ctgcaatctg ccgacgaata atttgcgcat cgtagaccca caccgggcag ccaaattcag
    33781 cgggcaaacg cagcagattt tcggcggtga gatcggtatc ggtgctgaac agtgaatgtg
    33841 gcataacaaa ctccagataa gtgctttttt atgattacgc cacatcataa aaagaataaa
    33901 aaatatcgat ttatgtcgag tctatgcaaa aatgatatgg attaccggat tgcgagagag
    33961 cgctaatggc cgccgttaac ttacgtcata ttgaaatttt tcatgcggta atgaccgccg
    34021 gaagcctgac tgaggcggca cacctgctac acacctcaca gccaaccgtc agccgcgaac
    34081 ttgcgcgctt tgagaaggtg atcgggctga aattgtttga gcgcgtacgt gggcgattac
    34141 atcctaccgt gcaaggactg cgtctgtttg aagaagtgca acgatcctgg tacggactgg
    34201 atcgaattgt cagcgctgca gaaagtctgc gcgagtttcg ccagggagaa ctgtctattg
    34261 cctgcctgcc ggtcttttcg caatcttttt taccgcagct cctgcaaccc tttctggcac
    34321 gttatcccga tgtcagctta aatatcgtgc cccaggaatc accgctactt gaagagtggc
    34381 tctcggccca gcgtcatgat ttaggactca ctgagacact ccatacgcct gcgggaacag
    34441 aacgtaccga attactctct ttagatgaag tgtgtgtgtt acctccgggt catccgctgg
    34501 cggtaaaaaa ggtattaacg ccggatgatt ttcagggtga gaactacatc agcctttccc
    34561 gtactgacag ctatcgccag ttgctggatc agctatttac tgaacatcag gttaaacgac
    34621 gcatgatcgt agaaacccac agcgccgcgt caatctgcgc aatggtacgg gcgggggtag
    34681 gtgtttcggt ggttaacccg ctcaccgcac tgaattatgc ggcaagcggt ttagtggtgc
    34741 ggcggttcag tattgcggtt ccgttcaccg tcagcctgat ccgccccctg caccgcccgt
    34801 catcagcgct ggtgcaggcg tttagtgagc atttacaagc ggggttaccg aaactggtca
    34861 cttctcttga cgctattttg tcgtcagcta cgacagcata aaagcgacag catcctcggc
    34921 atggatcgcc gcagtatcaa acacaggcaa aacactgcgc tcttctggca ccagtaaacc
    34981 aatttctgtg cagccaaaaa tgacgccctg tgcgccctgt tctgcaaggc gagcaatcac
    35041 ttgcgcataa taagcgcgtg acgcttcggt aaattgcccc agacacagtt cttcaaaaat
    35101 aatctgatta attttcgccc gttcatccgc ttcaggaata agacaattga tggaaaattg
    35161 ttccgtcagc cgcccgcgat aaaaatcctg ttccatggtg taacgcgtac ccagcagcgc
    35221 cacacgagtc attccggccc cggtaattgc acgtccggtg gcatccgcaa tgtgtaagaa
    35281 aggcagagtg caacgtgact caatggcatc cgccacttta tgcatcgtat tggtacataa
    35341 cacaatacct tctgcgcccg cccgctgtaa gccaagcgcc gcctcagcca gaatgtcccc
    35401 ggttttatcc cattccccgc gacgctggca ctcttctatt tcatgaaaat cgacgctatg
    35461 tagcagcact tgcgcagagt gaagcccacc aagccgctgt ttaatgcctt catttatcaa
    35521 acgatagtaa ggaatggtgg attcccagct cattcctccc agcaaaccaa ttgttttcat
    35581 tcctctctcc tgatgtgtgt taccgcaaca aggctgaata aggaacgaga caaacgcctc
    35641 aacggccaag tgcccaatct ctattaacga aaaaagggcc ggatgtacag cacatccggc
    35701 ccgtgaaatc agatgccgat atttctcaac ttctcgcctg ccatcagttt gcgttcgata
    35761 tgttccagcg tgacattttt ggtttccgga atgagccaga aagtgatgcc cacaaacgca
    35821 atgttcagcg cagtgtagag ccagaacgta ccggcagcgc caatgctgtc gagcagcgtc
    35881 aggaaggtcg cgccgataat catattcgac acccagttcg tggtggtcga acaggtaata
    35941 ccgaaatcgc ggcatttcag cggctgaatt tcagagcaca ggatccacac cactggcgcg
    36001 gcgctcatcg cataaccggc aatacacatc atcgtcatgc caacagagag ccaggacaag
    36061 ccactggaag ccgtaccgtt atcaaactgc atcaggcaat agcccagcac cagagtgcct
    36121 aacgccatca cgctgaaacc aattttcaga gccggtttac gccctgcttt atctaccgta
    36181 aacaccgcaa taaaggtggc gaacataaag gtcagcccta cgaccagagt cgcaatcatc
    36241 tgttgttctg tggtcgtaaa gcccgccatt ttgaagatac gcggcgcgta gtacatgatg
    36301 atgttcatac cggtaaactg ctgcatcgcc tgcaacaaca taccgagaaa cacagcacga
    36361 cggacgttac ggttgatctt aaacagtgcc caaccgccct gttttaactt caggctttca
    36421 cgaatttcgt tgagttcttc tcgcgctttt tccgacgtat cgcgcagcat acgcaatact
    36481 tcttccgcct caatatgacg ccccttttcc gccaaccagc gcgggctatt tggcaggaag
    36541 accaccagaa taatcagcag aactgctggt aaagcaagaa cccccaacat tgcgcgccag
    36601 ttaccgctat aactgaacgc tgtatcggat aaaaacgcca gcacgatgcc gagtgtgacc
    36661 atcaactggt acatactgat catcttaccg cgaacgtttt cacttgccat ttcagaaaga
    36721 tacagaggag cggtgtaaga cgcgatcccg acagcaatgc ccagcaccac acgagcggcg
    36781 attaacatct ctacgctggt cgcaaaagcg gaccctatag aaccgagtac aaacaggatg
    36841 gcccccgcca tcaggctgta tttacgcccc aggcggaacg acagccaacc attaaacagc
    36901 gcaccaattg ctgcgccgag catcatgcta ctaaccaccc attcctgcaa atgactggtc
    36961 agcacaaagt gatcggtaat gaacggcaac gctccggcga ttacgccgat atcaagacca
    37021 aataacaatc ctgcgaccgc agcagctacc gaaacaaaca tattcatacg ccgcgtatcc
    37081 cgcaaagaac gtggcgttaa agcagattcc gtattgatag taaccatttt ttcctgccag
    37141 cagagagtaa gacatagtga aaaaatacgt gaacaactca cgcaggtgtc aggtcggaaa
    37201 cagcataaat atggattaaa ttgctgcgac atgtcgttat gtgatggata ttccaatttt
    37261 caaattaagt tgaattattg agattattat taaccaccta attttacagc agataaaatt
    37321 cataaagttc attaattgat aattaatatg gattatttca taaccatgat atggattatg
    37381 atgatctaca ggtataaaaa accctgccat gcggcagggt cataaaagta agaagaatga
    37441 attaacgcgc cagccaaccg ccatccacgg caatggtata accattcaca taatctgaag
    37501 cgctggaggc aaggaacact atcggcccca tcaggtcact cggcagtccc caacgaccag
    37561 ctggaatgcg gtcgagaatt tccgcgctac gttgttcatc tgcccgtagt tgttgagtat
    37621 tgttggtcgc catgtaaccc ggagctatcg cattaacatt aatgttgtgt ttagcccatt
    37681 cgttcgccat caatcgcgtc acacccatca cgccgctttt tgatgcggta taagaaggca
    37741 cacggatccc gccctggaag gagagcattg acgcgatatt gataatcttg ccgccattgc
    37801 cttgcgcgat aaagtgtttc gccgctgcct gagacatgaa gaatacgctc ttgatattca
    37861 ggttcatgac atcgtcccag tctttttcgc tgaactcgag agcgtcttcg cggcgaatca
    37921 atccggcgtt attcaccagg atatcaatat gaccaaattc agctaccgcg cgatccagca
    37981 gtccaggaat gccatcaatc tttcgcagat cggcggtcag gcttaaaaaa cgacgcccca
    38041 gcgccgtgac ctgctcgatg gtttcagtcg gttcaacgat gttaatgcca acaatgtcac
    38101 agcccgcttg cgccagcccc aacgccatcc cctggcccag cccagtatca caaccagtga
    38161 c
//
LOCUS       DADMHC010000014        37959 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.014, whole genome shotgun sequence.
ACCESSION   DADMHC010000014 DADMHC010000000
VERSION     DADMHC010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 37959)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37959)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37959
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.014"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..311
                     /locus_tag="JNZ57_000577"
     CDS             <1..311
                     /locus_tag="JNZ57_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HAY8826899.1"
                     /translation="AFGALIGAVAGGVIGHNVGSGSNSGTTAGAVGGGAVAAAAGSMV
                     NDKTLVEGVSLTYKEGTKVYTSTQVGKECQFTTGLAVVITTTYNETRIQPNTKCPEKS
                     "
     gene            327..866
                     /locus_tag="JNZ57_000578"
     CDS             327..866
                     /locus_tag="JNZ57_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8826900.1"
                     /translation="MKKVFLCAILASLSYPAIASSLQDQLSAVAEAEQQGKNEEQRQH
                     DEWVAERNREIQQEKQRRANAQVAANKRAATAAANKKARQDKLDAEASADKKRDQSYE
                     DELRSLEIQKQKLALAKEEARVKRENEFIDQELKHKAAQTDLVQSEADANRNMTEGGR
                     DLMKSVGKAEENKSDSWFN"
     gene            complement(961..2538)
                     /gene="guaA"
                     /locus_tag="JNZ57_000579"
     CDS             complement(961..2538)
                     /gene="guaA"
                     /locus_tag="JNZ57_000579"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HAY8826901.1"
                     /translation="MTENIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEA
                     QIRDFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEA
                     SNEREFGYAQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFVTVAST
                     ESCPFAIMANEEKRFYGVQFHPEVTHTRQGMHMLERFVRDICQCEALWTPAKIIDDAV
                     ARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDM
                     FGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQ
                     GTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELG
                     LPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYNKVSQAFTV
                     FLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDFLGRVSNRIINEVNGIS
                     RVVYDISGKPPATIEWE"
     gene            complement(2607..4073)
                     /gene="guaB"
                     /locus_tag="JNZ57_000580"
     CDS             complement(2607..4073)
                     /gene="guaB"
                     /locus_tag="JNZ57_000580"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004159092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HAY8826902.1"
                     /translation="MLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPM
                     LSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVVTDPQTVLP
                     TTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVRFVTDLNQPVSVYMTPKERLV
                     TVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKAERKPNACKDEQGRL
                     RVGAAVGAGAGNEERVDALVAAGVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGG
                     NVATAAGARALAEAGCSAVKVGIGPGSICTTRIVTGVGVPQITAVADAVEALEGTGIP
                     VIADGGIRFSGDIAKAIAAGASAVMVGSMLAGTEESPGEIELYQGRSYKSYRGMGSLG
                     AMSKGSSDRYFQSDNAADKLVPEGIEGRVAYKGRLKEIIHQQMGGLRSCMGLTGCGTI
                     DELRTKAEFVRISGAGIQESHVHDVTITKESPNYRLGS"
     gene            4235..5605
                     /gene="xseA"
                     /locus_tag="JNZ57_000581"
     CDS             4235..5605
                     /gene="xseA"
                     /locus_tag="JNZ57_000581"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HAY8826903.1"
                     /translation="MLPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPAS
                     GHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESM
                     QPAGEGLLQQKYEQLKAKLQAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVL
                     KRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFND
                     ERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQS
                     TRQRLEMAMDYYLANRTRRFTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQL
                     KRTGQQQQRLTQRLNQQNPQPKIHRAQTRIQQLEYRLAETLRVQLSATRERFGNAVTH
                     LEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEMLTTRLEDGWIESEVKNIQPVKK
                     SRKKVH"
     gene            complement(5602..5817)
                     /locus_tag="JNZ57_000582"
     CDS             complement(5602..5817)
                     /locus_tag="JNZ57_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417005.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8826904.1"
                     /translation="MELHCPQCQHVLDQDNGHARCPSCGEIIEMKALCPDCHQPLQVL
                     KACGAVDYFCQHGHGLISKKRVEFVLA"
     gene            complement(5886..7358)
                     /gene="der"
                     /locus_tag="JNZ57_000583"
     CDS             complement(5886..7358)
                     /gene="der"
                     /locus_tag="JNZ57_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417006.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HAY8826905.1"
                     /translation="MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGR
                     AEIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAI
                     AKHLRSREKPTFLVANKIDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLL
                     PWMEDLAPQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTL
                     TNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVI
                     KTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQV
                     KETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAV
                     EDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMG
                     SPIRIQFKEGENPYANKRNTLTPTQMRKRKRLMKHIKKNK"
     gene            complement(7476..8654)
                     /gene="bamB"
                     /locus_tag="JNZ57_000584"
     CDS             complement(7476..8654)
                     /gene="bamB"
                     /locus_tag="JNZ57_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamB"
                     /protein_id="HAY8826906.1"
                     /translation="MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTP
                     TTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDG
                     WFSKEPALLSGGVTVFGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDG
                     LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSA
                     VLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQ
                     IMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYD
                     GNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSITR
                     "
     gene            complement(8665..9285)
                     /locus_tag="JNZ57_000585"
     CDS             complement(8665..9285)
                     /locus_tag="JNZ57_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HAY8826907.1"
                     /translation="MEIYENENDQVEAVKRFFAENGKALAVGVILGVGALIGWRYWNS
                     HQVDSARSASLAYQNAVTAVSEGKPDSIPAAEKFAAENKNTYGALASLELAQQFVDKN
                     ELEKAAAQLQQGLADTSDENLKAVINLRLARVQVQLKQADAALKTLDTIKGEGWAAIV
                     ADLRGEALLSKGDKQGARSAWEAGVKSDVTPALSEMMQMKINNLSI"
     gene            complement(9303..10577)
                     /gene="hisS"
                     /locus_tag="JNZ57_000586"
     CDS             complement(9303..10577)
                     /gene="hisS"
                     /locus_tag="JNZ57_000586"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HAY8826908.1"
                     /translation="MAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLP
                     IVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQE
                     QRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEH
                     VTLELNSIGSLEARANYRDALVAFLEQHKEKLDEDCKRRMYTNPLRVLDSKNPEVQAL
                     LNDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSL
                     GSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPEFKADPIVDIYLV
                     ASGADTQSAAMALAERLRDELQGVKLMTNHGGGNFKKQFARADKWGARVAVVLGESEV
                     TNGTAVVKDLRSGEQTAVAQDSVAAHLRTLLG"
     gene            complement(10688..11806)
                     /gene="ispG"
                     /locus_tag="JNZ57_000587"
                     /gene_synonym="gcpE"
     CDS             complement(10688..11806)
                     /gene="ispG"
                     /locus_tag="JNZ57_000587"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HAY8826909.1"
                     /translation="MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEAT
                     VNQIKALERVGADIVRVSVPTMDEAEAFKLIKQRVNVPLVADIHFDYRIALKVAEYGV
                     DCLRINPGNIGNEERIRMVVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLES
                     AMRHVDHLDRLNFAQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAV
                     KSAIGLGLLLSEGIGDTLRVSLAADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQ
                     EFDVIGTVNALEQRLEDIITPMDVSIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGV
                     RKDRLDNNDMIDQLEARIRAKASQLDEARRIDVQQVEK"
     gene            complement(11833..12846)
                     /gene="rodZ"
                     /locus_tag="JNZ57_000588"
     CDS             complement(11833..12846)
                     /gene="rodZ"
                     /locus_tag="JNZ57_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoskeleton protein RodZ"
                     /protein_id="HAY8826910.1"
                     /translation="MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTV
                     RDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSL
                     GKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELSSNSEQ
                     GQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANV
                     DTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLF
                     SGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQS
                     PAQ"
     gene            complement(13131..14285)
                     /gene="trmG/rlmN"
                     /locus_tag="JNZ57_000589"
     CDS             complement(13131..14285)
                     /gene="trmG/rlmN"
                     /locus_tag="JNZ57_000589"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA
                     large subunit methyltransferase RlmN"
                     /protein_id="HAY8826911.1"
                     /translation="MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQ
                     VMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ
                     RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVG
                     AAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPA
                     LDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVT
                     IEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVL
                     MSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAIDIKAV"
     gene            complement(14435..14866)
                     /gene="ndk"
                     /locus_tag="JNZ57_000590"
     CDS             complement(14435..14866)
                     /gene="ndk"
                     /locus_tag="JNZ57_000590"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HAY8826912.1"
                     /translation="MAIERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTV
                     EQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGT
                     LRADYADSLTENGTHGSDSVESAAREIAYFFGEGEVCPRTR"
     gene            complement(15015..17327)
                     /gene="pbpC"
                     /locus_tag="JNZ57_000591"
     CDS             complement(15015..17327)
                     /gene="pbpC"
                     /locus_tag="JNZ57_000591"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417014.1"
                     /note="penicillin-binding protein 1C; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase PbpC"
                     /protein_id="HAY8826913.1"
                     /translation="MLRLLTKRGCWITLAAVPFLLFLAAWGADKLWPLPLHEVNPARV
                     VVAQDGTPLWRFADADGIWRYPVTIEDVSPRYLEALINYEDRWFWKHPGVNPFSVARA
                     AWQDLTSGRVISGGSTLTMQVARLLDPHPKTFGGKILQLWRALQLEWHLSKREILILY
                     LNRAPFGGTLQGIGAASWAYLGKSPANLSYSEAAMLAVLPQAPSRVRPDRWPERAEGA
                     RNKVLERMAVQGVWSREQVKESREEPIWLAPRQMPQLAPLFSRMMLGKSKSDKIVTTL
                     DAGLQRRLEELAQNWKGRLPPRSSLAMIVVDHTDMRVRGWVGSVDLNDDSRFGHVDMV
                     NAIRSPGSVLKPFVYGLALDERLIHPASLLQDVPRRTGDYRPGNFDSGFHGPISMSEA
                     LVRSLNLPAVQVLEAYGPKRFAAKLRNVGLPLYLPNGAAPNLSLILGGAGAKLEDMAA
                     AYTAFARHGKAGKLRLQPDDPLLERPLMSSGAAWIIRRIMADEAQPLPDSALPRVAPL
                     AWKTGTSYGYRDAWAIGVNARYVIGIWTGRPDGTPVVGQFGFASAVPLLNQVNNILLS
                     RSANLPEDPRPNSVTRGVICWPGGQSLPEGDGNCRRRLATWLLDGSQPPTLLLPEQEG
                     INGIRFPIWLDENGKRVAADCPQARQEMINVWPLPLEPWLPASERRAVRLPPASTSCP
                     PYGHDAQLPLQLTGVRDGAIIKRLPGAAEATLPLQSSGGAGERWWFLNGEPLTERGRN
                     VTLHLTDKGDYQLLVMDDVGQIATVKFVMQ"
     gene            complement(17328..22289)
                     /gene="yfhM"
                     /locus_tag="JNZ57_000592"
     CDS             complement(17328..22289)
                     /gene="yfhM"
                     /locus_tag="JNZ57_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha2-macroglobulin"
                     /protein_id="HAY8826914.1"
                     /translation="MKKLRVAACMLMLALAGCDNNDNAPTAVKKDAPSEVTKAASSEN
                     ASSAKLSVPERQKLAQQSAGKVLTLLDLSEVQLDGAATLVLTFSIPLDPDQDFSRVIH
                     VVDKKSGKVDGAWELSDNLKELRLRHLEPKRDLIVTIGKEVKALNNATFSKDYEKTIT
                     TRDIQPSVGFASRGSLLPGKVVEGLPVMALNVNNVDVNFFRVKPESLPAFISQWEYRN
                     SLANWQSDKLLQMADLVYTGRFDLNPARNTREKLLLPLGDIKPLQQAGVYLAVMNQAG
                     RYDYSNPATLFTLSDIGVSAHRYHNRLDIFTQSLENGAAQQGIEVSLLNEKGQTLTQA
                     TSDAQGHVQLENDKNAALLLARKDGQTTLLDLKLPALDLAEFNIAGAPGYSKQFFMFG
                     PRDLYRPGETVILNGLLRDADGKALPDHPIKLDVIKPDGQVLRSVVSQPENGLYHFTW
                     PLDSNAATGMWHIRANTGDNQYRMWDFHVEDFMPERMALNLTGEKTPLTPNDEVKFSV
                     VGYYLYGAPANGNTLQGQLFLRPLREAVSALPGFEFGDIAAENLSRTLDEVQLTLDDK
                     GRGEVSTESQWKETHSPLQVIFQGSLLESGGRPVTRRAEQAIWPADALPGLRPQFALK
                     SVYDYRTDSTVKQPIVDEGSNAAFDIVYSDAQGVKKAVSGLQVRLIRERRDYYWNWSE
                     DEGWQSQFDQKDLIENEQTLDLKADETGKVSFPVEWGAYRLEVKAPNEAVSSVRFWAG
                     YSWQDNSDGSGAVRPDRVTLKLDKASYRPGDTIKLHIAAPTAGKGYAMVESSEGPLWW
                     QEIDVPAQGLDLTIPVDKTWNRHDLYLSTLVVRPGDKSRSATPKRAVGVLHLPLGDEN
                     RRLDLALETPAKMRPNQPLTVKIKASTKNGEKPKQVNVLVSAVDSGVLNITDYVTPDP
                     WQAFFGQKRYGADIYDIYGQVIEGQGRLAALRFGGDGDELKRGGKPPVNHVNIVAQQA
                     LPVTLNEQGEGSVTLPIGDFNGELRVMAQAWTADDFGSNESKVIVAAPVIAELNMPRF
                     MASGDTSRLTLDITNLTDKPQKLNVALTASGLLELVSDSPAAVELAPGVRTTLFIPVR
                     ALPGYGDGEIQATISGLALPGETVADQHKQWKIGVRPAFPAQTVNYGTALQPGETWAI
                     PADGLQNFSPVTLEGQLLLSGKPPLNIARYIKELKAYPYGCLEQTASGLFPSLYTNAA
                     QLQALGIKGDSDEKRRASVDIGISRLLQMQRDNGGFALWDKNGDEEYWLTAYVMDFLV
                     RAGEQGYSVPTDAINRGNERLLRYLQDPGMMSIPYADNLKASKFAVQSYAALVLARQQ
                     KAPLGALREIWEHRADAASGLPLLQLGIALKTMGDATRGEEAIVLALKTPRNSDERIW
                     LGDYGSPLRDNALMLSLLEENKLLPDEQYTLLNTLSQQAFGERCLSTQESNALFLAAR
                     TIQDLPGKWQAQTSFSAEPLTGEKTLNSNLNSDQLATLQVRNSGDQPLWLRMDASGYP
                     QSAPLPANNVLQIERHILGTDGKSKSLDSLRSGDLVLVWLQVKASNSVPDALVVDLLP
                     AGLELENQNLANGSASLEQSGGEVQNLLNQMQQASIKHIEFRDDRFVAAVAVDEYQPV
                     TLVYLARAVTPGTYQVPQPMVESMYVPQWRATGAAEDLLIVRP"
     gene            22496..23341
                     /gene="sseA"
                     /locus_tag="JNZ57_000593"
     CDS             22496..23341
                     /gene="sseA"
                     /locus_tag="JNZ57_000593"
                     /EC_number="2.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-mercaptopyruvate sulfurtransferase"
                     /protein_id="HAY8826915.1"
                     /translation="MSTTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLN
                     GHIPGAVFFDIKALSDHTSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAP
                     RAWWMLRTFSVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDV
                     LLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDE
                     LDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLP
                     VEPVK"
     gene            complement(23834..24610)
                     /gene="sseB"
                     /locus_tag="JNZ57_000594"
     CDS             complement(23834..24610)
                     /gene="sseB"
                     /locus_tag="JNZ57_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708361.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enhanced serine sensitivity protein SseB"
                     /protein_id="HAY8826916.1"
                     /translation="MSETKNELEDLLEKAATEPAHRPAFFRTLLESTVWVPGTAAQGE
                     AVVEDSALDLQHWEKEDGTSVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETL
                     FLNAKLPTGKEFMPREISLLIGEEGNPLSSQEILEGGESLILSEVAEPPAQMIDSLTT
                     LFKTIKPVKRAFICSIKENEEAQPNLFIGIEADGDIEEIIQATGSVATDTLPGDEPID
                     ICQVKKGEKGISHFITEHIVPFYERRWGGFLRDFKQNRII"
     gene            complement(24752..26035)
                     /gene="pepB"
                     /locus_tag="JNZ57_000595"
     CDS             complement(24752..26035)
                     /gene="pepB"
                     /locus_tag="JNZ57_000595"
                     /EC_number="3.4.11.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase PepB"
                     /protein_id="HAY8826917.1"
                     /translation="MTEAMKITLSTQPADARWGEKATYSINNDGITLHLNGADDLGLI
                     QRAARKIDGLGIKHVQLSGEGWDADRCWAFWQGYKAPKGTRKVEWPDLDDAQRQELDN
                     RLMIIDWVRDTINAPAEELGPSQLAQRAVDLISNVAGDRVTYRITKGEDLREQGYMGL
                     HTVGRASERSPVLLALDYNPTGDKEAPVYACLVGKGITFDSGGYSIKQTAFMDSMKSD
                     MGGAATVTGALAFAITRGLNKRVKLFLCCADNLISGNAFKLGDIITYRNGKKVEVMNT
                     DAEGRLVLADGLIDASAQKPEMIIDAATLTGAAKTALGNDYHALFSFDDALAGRLLAS
                     ASQENEPFWRLPLAEFHRSQLPSNFAELNNTGSAAYPAGASTAAGFLSHFVENYQQGW
                     LHIDCSATYRKAPVEQWSAGATGLGVRTIANLLTA"
     gene            complement(26213..26413)
                     /gene="iscX"
                     /locus_tag="JNZ57_000596"
     CDS             complement(26213..26413)
                     /gene="iscX"
                     /locus_tag="JNZ57_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004104502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HAY8826918.1"
                     /translation="MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDD
                     DPQASNEKILEAILLVWLDEAE"
     gene            complement(26425..26760)
                     /gene="fdx"
                     /locus_tag="JNZ57_000597"
     CDS             complement(26425..26760)
                     /gene="fdx"
                     /locus_tag="JNZ57_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015683702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HAY8826919.1"
                     /translation="MPKIVILPHQDLCPDGAVLEANSGETILDAALRNGIEIEHACEK
                     SCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPR
                     YTINHAREH"
     gene            complement(26762..28612)
                     /gene="hscA"
                     /locus_tag="JNZ57_000598"
     CDS             complement(26762..28612)
                     /gene="hscA"
                     /locus_tag="JNZ57_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001559634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HAY8826920.1"
                     /translation="MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETL
                     ADHEGRHLLPSVVHYQQQGHSVGYDARTNAALDTANTISSVKRLMGRSLADIQQRYPH
                     LPYQFQASENGLPMIETAAGLLNPVRVSADILKALAARATEALAGELDGVVITVPAYF
                     DDAQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISIL
                     RLSRGVFEVLATGGDSALGGDDFDHLLADYIREQADIPDRSDNRVQRELLDAAIAAKI
                     ALSDADSVTVNVAGWQGEISREQFNELIAPLVKRTLLACRRALKDAGVEADEVLEVVM
                     VGGSTRVPLVRERVGEFFGRPPLTSIDPDKVVAIGAAIQADILVGNKPDSEMLLLDVI
                     PLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRS
                     LARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSE
                     IASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDNAA
                     AHLSEVAQGDDVDAIEQAIKNVDKQTQDFAARRMDQSVRRALKGHSVDEV"
     gene            complement(28629..29144)
                     /gene="hscB"
                     /locus_tag="JNZ57_000599"
     CDS             complement(28629..29144)
                     /gene="hscB"
                     /locus_tag="JNZ57_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012131249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone HscB"
                     /protein_id="HAY8826921.1"
                     /translation="MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQ
                     LAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREEL
                     DEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETWDAAADTVRKLRFLDKLRSS
                     AEQLEEKLLDF"
     gene            complement(29240..29563)
                     /gene="iscA"
                     /locus_tag="JNZ57_000600"
     CDS             complement(29240..29563)
                     /gene="iscA"
                     /locus_tag="JNZ57_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017373466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HAY8826922.1"
                     /translation="MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEF
                     VDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCG
                     ESFHV"
     gene            complement(29580..29966)
                     /gene="iscU"
                     /locus_tag="JNZ57_000601"
     CDS             complement(29580..29966)
                     /gene="iscU"
                     /locus_tag="JNZ57_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000331707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HAY8826923.1"
                     /translation="MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQ
                     IKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLVEAQAIKNTDIAEELELPPV
                     KIHCSILAEDAIKAAIADYKSKREAK"
     gene            complement(29994..31208)
                     /gene="iscS"
                     /locus_tag="JNZ57_000602"
     CDS             complement(29994..31208)
                     /gene="iscS"
                     /locus_tag="JNZ57_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311423.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HAY8826924.1"
                     /translation="MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFG
                     WQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKT
                     EHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVV
                     QDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYV
                     RRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNR
                     LWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLE
                     PSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQ
                     GVDLNSIEWAHH"
     gene            complement(31320..31808)
                     /gene="iscR"
                     /locus_tag="JNZ57_000603"
     CDS             complement(31320..31808)
                     /gene="iscR"
                     /locus_tag="JNZ57_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002913993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HAY8826925.1"
                     /translation="MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQ
                     LFSRLRKNGLVSSVRGPGGGYLLGKDASSIAVGEVISAVDESVDATRCQGKGGCQGGD
                     KCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRTRTQDAIDVKL
                     RA"
     gene            complement(32078..32818)
                     /gene="trmJ"
                     /locus_tag="JNZ57_000604"
     CDS             complement(32078..32818)
                     /gene="trmJ"
                     /locus_tag="JNZ57_000604"
                     /EC_number="2.1.1.200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ"
                     /protein_id="HAY8826926.1"
                     /translation="MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS
                     QAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA
                     EAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW
                     LATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTR
                     ARPESQELNILRGILASIEQQNKGNKAE"
     gene            32937..33740
                     /gene="suhB"
                     /locus_tag="JNZ57_000605"
     CDS             32937..33740
                     /gene="suhB"
                     /locus_tag="JNZ57_000605"
                     /EC_number="3.1.3.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000553460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-1-monophosphatase"
                     /protein_id="HAY8826927.1"
                     /translation="MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVD
                     KAAEAVIIDTIRKSYPQHTIITEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVS
                     IAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFK
                     AKQYATAYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGEL
                     LVREAGGIVSDFTGGHNYMLTGNIVAGNPRVVKAMLANMRDELSDALKR"
     gene            33885..34739
                     /locus_tag="JNZ57_000606"
     CDS             33885..34739
                     /locus_tag="JNZ57_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311427.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HAY8826928.1"
                     /translation="MALPVNKRVLKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGP
                     DPWSAESVEFTAKDGTRLQGWFIPSSTGPADNAIVTIIHAHGNAGNMSAHWPLVSWLP
                     ERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGA
                     NILAVIGQDDREGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIP
                     LLLIHGKADHVIPWQHSEKLYSLAKETKRLILIPDGEHIDAFSDRHGDVYREQMVDFI
                     LSALNPQN"
     gene            34909..36099
                     /gene="csiE"
                     /locus_tag="JNZ57_000607"
     CDS             34909..36099
                     /gene="csiE"
                     /locus_tag="JNZ57_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001337652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stationary phase inducible protein CsiE"
                     /protein_id="HAY8826929.1"
                     /translation="MLMGDLQMMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFS
                     ELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGF
                     RLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFETRDIHFLC
                     LYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFM
                     ALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQ
                     ALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFG
                     AWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRG
                     AARH"
     gene            complement(36207..37346)
                     /locus_tag="JNZ57_000608"
     CDS             complement(36207..37346)
                     /locus_tag="JNZ57_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate MFS transporter"
                     /protein_id="HAY8826930.1"
                     /translation="MVLQSTRWLALGYFTYFFSYGIFLPFWSVWLKGIGLTPETIGLL
                     LGAGLVARFLGSLLIAPRVSDPSRLISALRVLAMMTLLFAVAFWAGAHVAWLMLVMIG
                     FNLFFSPLVPLTDALANTWQKQFPLDYGKVRLWGSVAFVIGSALTGKLVTMFDYQVIL
                     ALLTLGVASMLLGFLIRPTIQPQGASRQQESTGWSAWLALVLQNWRFLACVCLLQGAH
                     AAYYGFSAIYWQAAGYSASAVGYLWSLGVVAEVIIFALSNKLFRRCSARDMLLISAIC
                     GVVRWGIMGATTALPWLIVVQILHCGTFTVCHLAAMRYIAARQGSEVIRLQAVYSAVA
                     MGGSIAIMTVFTGFLYQYLGHGVFWVMALVALPAMFLRPKVVPSC"
     gene            complement(37506..>37959)
                     /locus_tag="JNZ57_000609"
     CDS             complement(37506..>37959)
                     /locus_tag="JNZ57_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311430.1"
                     /note="activator of 3-phenylpropionic acid catabolism;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY8826931.1"
                     /translation="HPVYSPEIDYLELFDEPLVVVLPVDHPLAHEKEITAAQLDGVNF
                     VSTDPAYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMGLGVTLIPGYMNNF
                     NTGQVVFRPIAGNVPSIALLMAWKKGEMKPALRDFIAIVQERLASVTA"
BASE COUNT         8975 a        10544 c         9457 g         8983 t
ORIGIN      
        1 aagccttcgg cgcgcttatt ggcgcagtcg ctggcggtgt tatcggccac aacgtcggtt
       61 ctggcagcaa ttccggaacg acggcagggg cagttggcgg cggagctgta gccgcggcag
      121 cgggttctat ggtgaatgat aaaaccttag tggaaggtgt ttctttaaca tataaggaag
      181 gcaccaaagt gtatacctct acacaggtgg gtaaagagtg ccagtttacg acaggtttag
      241 ccgttgttat taccacaacg tataacgaaa cgcgtattca gccaaatact aaatgtcctg
      301 aaaagagcta ataatcagga ggagtcatga agaaagtttt tctttgcgcc atcttggcct
      361 ccttaagcta tccggctatc gcctcatcat tgcaggatca actctctgct gtagcagaag
      421 cggaacagca aggtaaaaat gaagagcaaa ggcagcatga cgaatgggtc gcggagcgca
      481 acagggaaat ccagcaagag aagcaacgtc gcgcaaatgc ccaggtcgcc gctaacaaaa
      541 gagcggcaac ggcagcagca aataagaaag ctcgtcagga taaactggac gccgaagcct
      601 ctgcggacaa aaaacgcgat caaagttatg aagatgagct acgcagctta gagattcaga
      661 aacaaaaact ggcgctggca aaagaagaag cccgcgttaa gcgagaaaac gaatttatcg
      721 atcaggaact gaagcacaaa gctgcgcaaa ccgatttggt gcaatctgaa gctgacgcca
      781 acagaaatat gactgaaggc ggtcgcgatc tgatgaaaag cgtgggcaaa gcagaagaga
      841 acaaatcgga cagctggttt aattaatcga tgttagtaac ttcaagccta tgattcttga
      901 agataaaaaa ccctctgtag taacagaggg ttttgttcat tcatagtgca gggattaaaa
      961 tcattcccac tcaatggtag ctggcggctt gccgctgatg tcatacacca cgcgggaaat
     1021 accgttcact tcattgataa tgcggttgga aacgcgaccg aggaaatcgt acggcagatg
     1081 cgcccagtgt gcggtcataa agtcgatggt ttcgacagca cgcagagaga caacccagtc
     1141 atacttacga ccatcgccca ttacgccaac ggaacgtacc ggcaggaaca cagtgaacgc
     1201 ctggctgact ttgttgtaca ggtccgcttt acgcagttct tcaatgaaga tggcgtcagc
     1261 acggcgcagc aggtcacagt actctttctt cacttcaccc agcacacgaa cgccaaggcc
     1321 tggtcccggg aacgggtgac ggtacagcat gtcgtacggc aggcccagct ccagaccaat
     1381 cttacgcact tcgtctttga acagctcttt cagcggttca accaggccca tcttcatctc
     1441 tttcggcagg ccgcccacgt tgtggtgaga tttgatgacg tgtgctttac cggttgcaga
     1501 agccgcagat tcgataacgt cagggtagat ggtgccctgc gccagccact tcacgtcttc
     1561 cagtttcagc gcttcttcat cgaacacttc aacgaaaacg cgcccgatga ttttacgttt
     1621 tgcttccgga tcgttttcgc cagccagcgc tgacaggaag cgatcttctg ccggtacgtg
     1681 aacaatgttc agaccaaagt gatcgccaaa catatccaga acctgctctg cttcgttgag
     1741 acgcagcagg ccgttgtcga cgaatacgca agtcaggttt ttaccgatag cgcggtgcag
     1801 cagcattgcg gttacggagg aatccacacc accagagagg ccgaggatga ctttatcgtc
     1861 gcctacctgc tcgcggatgc gagctacagc atcgtcgata attttcgctg gcgtccacag
     1921 ggcttcacac tggcagatat cacgcacaaa acgctccagc atgtgcatac cctggcgggt
     1981 gtgagtcact tccgggtgga actgtacgcc atagaagcgt ttttcttcgt tagccataat
     2041 ggcaaacggg cagctttcgg tgctggctac ggtgacgaag tcggacggga tagcggtaac
     2101 tttatcgccg tggctcatcc agacatcgag cagcggttta ccgtctgcgg tcagcgcatc
     2161 ttcgataccg cgaaccagtg cgctgtcgtt tacgacttca acctgcgcgt agccaaattc
     2221 acgttcgtta gaggcttcaa cgtgaccgcc caactgcatt gccatggtct gcatgccata
     2281 gcaaacgccg aataccggta cgcctgcttc aaagacatac tgcggcgcac gcggactgtt
     2341 ttcttcagta gtactttccg ggccgccgga aagaataatg ccgcttggat tgaagtcacg
     2401 aatttgtgct tctgtcacat cccacgccca cagttcgcag taaacaccca gctcacgcac
     2461 gcggcgcgca accagttgag tgtactgaga accgaagtcc agaatgagga tgcgatgctt
     2521 atgaatgttt tccgtcattg acgcttattc cgaggcaagt gaaacagata atataaatcg
     2581 cccgacatga agtcgggcga agagaatcag gagcccagac ggtagttcgg ggactcttta
     2641 gtaatggtca cgtcgtgaac gtggctttcc tgaatgcccg caccgctgat acgtacaaac
     2701 tccgctttag tacgcagttc gtcgatagta ccacagccgg tcaggcccat acaggagcgc
     2761 aggccgccca tctgctggtg aatgatctct ttcaggcgac ctttataggc tacgcgacct
     2821 tcgatacctt ccggcaccag tttgtcggca gcgttgtcac tctggaagta acggtcagaa
     2881 gaacctttgg acatcgcacc cagagagccc ataccacggt aagatttgta agaacggccc
     2941 tggtagagtt caatttcacc cggagattct tcagtacccg ccagcatgga acccaccatt
     3001 accgcgcttg cgccagcggc gatagctttg gcgatgtcgc cggagaagcg aataccacca
     3061 tctgcgataa ccggaatacc tgtgccttcc agcgcttcaa ctgcgtcagc aacggcagtg
     3121 atctgcggaa cacctacgcc agtaacgata cgagtcgtac agatagaacc agggccgata
     3181 ccgactttaa ccgcgctgca accagcttct gccaaagcgc gtgcacctgc agctgttgcc
     3241 acgttgccgc cgatgatttg cagatccgga tatttagcac gggtttcacg gatacgctgc
     3301 aaaacgcctt ctgagtggcc gtgggaggag tcgatcagca gaacgtcaac gccagcggca
     3361 accagcgcgt caacacgctc ttcgttaccc gcacctgcgc caactgcagc accaacacgc
     3421 agacggcctt gctcgtcttt acaggcgttc ggtttacgtt ccgctttctg gaagtctttc
     3481 acggtgatca tgccgatcag gtggaattcg tcatcaacca ccagcgcttt ttcaacgcgt
     3541 ttttcgtgca tttttgccag caccacttca cgggcttcac cttcacgcac ggtgaccaga
     3601 cgctctttcg gcgtcatgta aacgctaacc ggctggttca ggtcggtaac aaaacgcacg
     3661 tcacgaccgg tgataatacc caccagttcg ttttcttcgg taacaaccgg atagcccgca
     3721 aaaccgttac gctcggtcag ttctttcact tcgcgcagcg tcgtggttgg cagaacagtc
     3781 tgcggatcag tcaccacacc agattcgtgt tttttcacac ggcgaacttc ttctgcctgg
     3841 cgttcaatgg acatgttttt gtggataaag ccgataccgc cttcctgagc cagagcaata
     3901 gccaggcgcg cttccgttac ggtatccatt gctgcggaaa gcatagggat attcagacga
     3961 atagttttcg tcagctgggt gctgaggtca gcagtattcg gcagaacggt agaatgagca
     4021 ggaacgagga gaacgtcgtc aaacgtcaga gcttctttag cgatacgtag catgggcaat
     4081 atctcgacca gagtggttaa taaatattgc cgcggcatta tacagagcgt aaccgattgc
     4141 atctacccct ttttgcaaaa aatgcttgct atccccgaag ggcgggttac tatcgactga
     4201 ataacctgct gatttagaat ttgatctcgc tcacatgtta ccttctcaat cccctgcaat
     4261 ttttaccgtt agtcgcctga atcaaacggt tcgtctgctg cttgagcatg agatgggaca
     4321 ggtttggatc agcggcgaaa tctctaattt cacacaaccg gcttccggtc actggtactt
     4381 tacactcaaa gacgacaccg cccaggtacg ctgcgcgatg ttccgcaaca gcaaccgccg
     4441 ggtgaccttc cgtccacagc atggacaaca agttttagtt cgcgccaata ttacgctcta
     4501 cgagccgcgc ggtgactacc agataatcgt tgagagtatg cagccggccg gtgaagggct
     4561 gctgcaacag aagtacgaac agctcaaagc gaagttgcag gctgaaggtt tgttcgatca
     4621 gcaatacaaa aaaccacttc cctcccctgc gcattgcgtt ggtgtgatca cctcaaaaac
     4681 cggtgctgcg ctacatgata ttttgcatgt gttaaaacgt cgcgatcctt ctctaccggt
     4741 gatcatctac cccaccgccg ttcagggcga tgacgcaccg gggcaaattg ttcgcgccat
     4801 tgaactggcg aatcagcgca atgagtgcga cgtgttgatc gttgggcgcg gcggcggttc
     4861 gctggaagat ttatggagtt ttaacgacga acgcgtagcg cgggcgattt ttgccagccg
     4921 cattccggtc gtcagcgccg tcgggcatga gacggatgtg accattgccg attttgttgc
     4981 cgatctgcgt gcgccaacgc cgtctgccgc cgctgaagta gtgagccgta atcagcaaga
     5041 gttactgcgc caggtgcaat cgacccgtca acggctggag atggcgatgg attattatct
     5101 cgccaaccgc acgcgtcgct ttacgcagat ccatcaccga ttacagcaac agcatccgca
     5161 gctccggctg gcacgccagc aaaccatgct tgagcgcctg caaaagcgga tgagctttgc
     5221 gctggaaaat caacttaagc gtaccgggca acagcagcag cggttaacac agcggctgaa
     5281 tcagcaaaat ccacagccga agattcatcg cgcgcaaacg cgcattcagc aactggaata
     5341 tcgtttagca gaaaccctgc gcgtacagct tagcgccacg cgtgaacgtt tcggtaatgc
     5401 agtaacgcac ctcgaagccg taagcccact gtcaacgctg gcgcgtggat acagcgttac
     5461 tactgctact gacggcaatg tactgaaaaa agtgaagcaa gttaaagcgg gtgaaatgct
     5521 aaccacacgt ctggaagacg gctggataga aagtgaagtt aaaaacatcc agccagtaaa
     5581 aaaatcgcgt aaaaaggtgc attaagccag cacgaattca acgcgttttt tcgatatcaa
     5641 gccatgcccg tgctgacaga agtaatctac tgcaccgcag gcttttaaca cctgcaacgg
     5701 ttgatggcag tctggacaaa gagctttcat ttcaataatt tccccgcagg atgggcaacg
     5761 cgcatggccg ttatcctgat caagcacatg ctgacattgt ggacaatgca gttccatatg
     5821 aattcctccg gtagccatcc ctctacattc atagagggaa tggcagataa aatacttacg
     5881 gataattatt tatttttctt gatgtgcttc atcagacgct tacgtttacg catctgggtt
     5941 ggcgtcaggg tgttacgctt gttcgcatac gggttttccc cttctttgaa ctgaatacga
     6001 atcggcgatc ccattacgtc cagcgatttg cggaagtagt tcatcaagta gcgcttgtag
     6061 gaatcaggca ggtctttcac ctgattaccg tgaatcacca caatcggcgg gttataacca
     6121 ccagcgtggg catatttcag cttcacacga cgaccgcgta ccagcggcgg ttggtgatct
     6181 tcaacagcca tcgtcatgat gcgcgtcagc atagaggtcc ccacacgacg ggtggagctg
     6241 tcatacgctt cacgtactga ttcaaacaag ttaccaacac cactgccgtg caaggcagag
     6301 ataaagtgca cacgagcaaa atcgataaag cccagacgga agtccagcgt ttctttcacc
     6361 tgctctttca cttcctggct caggccatcc cacttattca ccacaatgac aagtgagcgc
     6421 ccactattga gaataaagcc cagcagcgag agatcctgat cggaaatacc ttcgcgcgca
     6481 tcaatcacta acatcaccac gttggcatct tcaatggcct gcaacgtttt gattacggag
     6541 aatttctcta cagcatcggt gattttgccg cgtttacgta cgccagcggt gtcaatgagc
     6601 acatactcac gtccatcgcg ttccattgga atgtagatac tgtcacgcgt cgtgccaggc
     6661 atgtcataaa caacaacgcg ctcttcacca agaatacggt tagtgagtgt agacttacct
     6721 acgttcggac gacccacaat cgccagtttg atcggcagac tttgcgggtc gaagtcgtct
     6781 tcctcttctt cttcgccgtt ctcttccgct tcaaattgcg cccagtattc agcgtcttcg
     6841 tcgacttcct cttgcggtgc gagatcttcc atccacggca gcagcacatg ctccagcaga
     6901 cttaatacgc cacgaccgtg agacgcggcg atcgggtaga tttcacctaa gccaagcgag
     6961 tagaaatcaa ccactgcctg atcgggatcc agaccgtcaa ttttgtttgc caccaggaag
     7021 gtcggttttt cacgggagcg cagatgtttg gcaatcgctt catctgccgg catcaggccc
     7081 gcgcgcgcat ccaccataaa cagtacgacg tccgcttctt caatcgccag cagcgactgt
     7141 tccgccatgc gggtttctac accgtcttct gtgccatcaa tcccgccggt atcaatacag
     7201 ataaactcac ggccttcaat ttccgcacga ccgtacttac ggtcacgagt cagacccggg
     7261 aaatccgcaa ccagcgcatc tcgggtgcga gttagacggt taaataacgt ggattttcct
     7321 acgttagggc gcccgacaag cgcgaccaca ggtaccatgt ttaaagcctc atttttataa
     7381 atcatcagac aacgcacgct atattcgcgt cgttgttaaa aacaggaaaa cggcccctgt
     7441 ccaggagccg ttttcaaagt gaacgacaga gacgattaac gtgtaataga gtacacggtt
     7501 ccgtcttttg cctggatcag cagtttgccg tcagcggcaa ccggttcagt ctggaaaccg
     7561 gaactatcaa ctttttgctg ggcaacgaaa cgaccatctt cgacattaat ccagtgcaga
     7621 taaccttcac tgtcaccgac caccaggttg ccatcataca gcaccggaga agtcagcagg
     7681 cgatgcaaca gatcgctttg tgtccacagc gtaacgccgc catcaatggt caacgccatc
     7741 acccggtcat tttgatcgac cagatagatg cgattgccgt cgacgatgaa atcattcacc
     7801 gaacccagtt cgcgtttcca cataatctga ccactgcgca gatcaagcgc cgtcaggtta
     7861 ccattatagg ccagcgcgaa aacaacgccg ttaacaacga cgggagtcgt gtcaacatcg
     7921 cttagacggt caatttcggt agaaccggtc gcctgggaaa tacgctgctg ccaaatcatc
     7981 tggccctgtt ccatcagcac tgcgctgacg cgaccattat cgccccccac gacggccgca
     8041 ccaaaagccg ttgccggcgc agactcgcca cgcaaagaga gcgaaggcat atcgaggtta
     8101 actgtccatt tgacagcgcc gtcagcttcg ttcagcgctt gtaactgacc gttactggtg
     8161 tggattaaca ccagaccgtc gctgaccacc gggcgcgaaa gtgcttcacc cgcgacttta
     8221 gtttgccatg ccacagtacc atcgctggta ttcagcgcgt aaacctgcgc cttttcgctg
     8281 ccaatgtaga catgcccacc aaacacggtc acaccgccag aaagtaatgc aggctcttta
     8341 gagaaccagc catctttctc ggccaggctg acagaccaga tttctttgcc atcatccgca
     8401 ttcagcgctt ttaccaaacc agcgcggtcc gctgcataga caacgttgtc cgccagtgcc
     8461 ggatgaagat tggaatagaa gttgccaatg ccgctaccaa cagaagtact ccacgccgtg
     8521 gtcggcgtaa actggttttc aacggttggc aatggggaca tctttaccac atcttcttcg
     8581 ctgttaaaca gcgaacagcc gcttaaaagg gtaacggaaa gcagtcctgg cagcagtaat
     8641 ttacgcaatt gcatcgggtc cctctcagat ggacaaatta ttaattttca tctgcatcat
     8701 ttcgctcagt gccggagtaa catcgctttt cacgcctgct tcccatgcac tacgcgcacc
     8761 ttgcttatca cctttgctca gcaatgcttc accacgcagg tcggcaacaa tggcagccca
     8821 cccttcacct ttgatggtat caagggtttt cagcgcggca tcagcctgct tgagctgtac
     8881 ctgaacgcga gcaagacgca gatttatcac ggctttgaga ttttcatcgc tcgtgtctgc
     8941 cagcccctgt tgtaactggg cggcagcttt ctctagttca tttttgtcaa caaattgctg
     9001 cgcaagttcc aaagaagcca gcgcaccata agtattttta ttttcagcag caaatttttc
     9061 cgccgccggg atgctatccg gtttgccttc gctcactgcg gtaaccgcat tttgataggc
     9121 aagagaagcg gagcgtgcag aatcaacctg atggctgttc cagtagcgcc agccaatcag
     9181 tgcgccaacg cccaaaatca ccccaacagc cagtgctttg ccattttcag caaaaaagcg
     9241 tttaaccgct tctacctggt cgttttcgtt ctcgtaaatt tccacgctgt ccttctcctt
     9301 ccttaaccca gtaacgtgcg caaatgcgcg gctacgctat cctgcgcaac tgccgtttgc
     9361 tcaccagagc gcaaatcctt cactactgct gtgccgttag tcacttcaga ctcacccagc
     9421 accacagcaa cgcgggcacc ccatttatca gcacgggcaa actgtttctt aaagttgccg
     9481 ccgccgtggt tggtcatcaa tttcacgccc tgtaattcat cacgcagacg ctcagctaat
     9541 gccatagccg cagattgtgt atcagcacct gaagccacca agtatatatc gacaatagga
     9601 tcggctttaa attccggatt aacggcctgt actaacaata caagacgttc gaggcccatc
     9661 gcaaaaccga cagccggtgt tgcacgaccg cccagttgtt ccacaagacc gtcataacga
     9721 ccgcctgcac acacggtgcc ctgggagccg agactgttag tcacccactc gaaaacggta
     9781 cggttatagt aatccagacc acgcaccaga cgctggttta cggtgtaagc gatccccgcg
     9841 ctctcaagca gtttgcacag accggcaaaa tgctcacgag attcctcgtc cagataatca
     9901 cctaatgccg gagcgtcgtt gagaagcgcc tgcacttccg gattttttga atccagcacg
     9961 cgcagcgggt tagtgtacat gcggcgtttg cagtcttcgt ccagcttttc tttatgctgc
    10021 tcaaggaatg ccaccagcgc atcgcggtaa ttggcgcgtg cttccagcga accgatagaa
    10081 ttcagctcaa gagttacgtg ttcggaaata cccagcgcgc gccaccagcg ggcggtgagc
    10141 ataatcagtt cagcgtcgat atccggacct tgcagaccga aaacttcgca gcccaactga
    10201 tggaactgac gataacgccc tttctgcgga cgctcgtgac ggaacatcgg cccgatatac
    10261 cacagacgct gttcctgatt gtacagaaga ccatgctcga tgccggcgcg tacacagccc
    10321 gccgtccctt cagggcgcag agtcaggctg tcgccattgc gatcctcaaa ggtgtacatc
    10381 tctttttcaa ccacgtcggt gacttcacca atcgcacgtt tgaatagcgg ggtctgctct
    10441 acaatcggca agcggatttc actgtaaccg tagctgccga gcacgttttt cagtgtgcct
    10501 tcaatgcgct gccagatggc cgtttcgcca ggcaggtaat cgttcatgcc gcgaatggct
    10561 tgaatgtttt ttgccacgtt tattctcttt ctgaatataa aaatgaaccc tcaacgcttc
    10621 cctcaatgtt tggggagcca tgcgggttca atcatacacg ggaagcgagg cgcttcccat
    10681 cacgttatta tttttcaacc tgctgaacgt caattcgacg cgcttcatcc agctgactgg
    10741 ctttcgcacg aatgcgtgct tccagctggt cgatcatatc gttgttgtcc agacggtctt
    10801 tgcgcacgcc atcttcatag aggccgcttt tcttgttgcc gccggtgacg ccgagtgtag
    10861 aaaccagcgc ctcacctggg ccattcacca cgcagccgat aatcgaaacg tccatcggag
    10921 tgatgatatc ttccaggcgt tgctccagcg cgttaaccgt accgataaca tcaaattcct
    10981 gacgcgaaca ggtcgggcag gcgatgaagt tgatccctcg cgaacggata cgcagcgatt
    11041 tcaaaatatc gaaaccgact ttgatctctt cgaccggatc ggccgccagc gatacgcgca
    11101 gcgtgtcgcc gatgccttca gacagcagca gacctaaacc aatggcggat tttactgccc
    11161 cgctgcgtgc accaccggct tcggtgatcc ccagatgcag cggctgatcg atctgttttg
    11221 ccagcaaacg ataagactca acagcgagga agacgtcaga cgctttcacg ctgactttga
    11281 actgagcgaa gttcaggcga tcgagatgat caacatgacg catggcggat tccagcaacg
    11341 cctgcggcgt cggttcgcca tacttttctt gcagatcttt ttccagcgat ccggcgttaa
    11401 cgccaatacg gatcggaatg tttttatcgc gcgcacagtc aaccaccatg cgaatacgct
    11461 cttcattacc gatattgcca gggttaatac gcagacaatc gacgccgtat tccgctactt
    11521 tcagcgcaat gcgatagtcg aagtggatgt cagccaccag cggcacgtta acccgctgtt
    11581 tgatgagttt gaacgcttct gcctcgtcca tcgtcggtac ggagacacgg acgatatcag
    11641 cgccaacgcg ttccagcgcc ttgatttgat tgaccgttgc ttcgacatct gtcgtacgcg
    11701 tattggtcat ggactgtacg gcgatgggag caccatcgcc aatcggcaca ttcccaacgt
    11761 aaatacgtgt tgattttcta cgttgaattg gagcctggtt atgcatgaaa aatctcccgc
    11821 gttacccgtc tgttactgcg ccggtgattg ttcggcattg agggtcagac gcgcaacctg
    11881 gttagttctg ataaaacgac tcagatcgac aggtttccct tgatactgga tctgtactgc
    11941 ggctggcgca ccaattttca gtttgtacgg tgcctggccg gttaagttca aattaccgtc
    12001 tttacgctgc ataccgctaa acaatttttt accggtagca tcagtgacct ccagccagca
    12061 atcggcagta aagttcatca ccagcgcatt cggatcagcc accggcgtgg tcacgccagc
    12121 ctgatcggtt ggcaacggcg cagcaccatc tggcgttgtt gctgccgttg gtgccggggt
    12181 cgcggcggta tcaacatttg cctgcgaagg cgaaacaacc gcattctgtt gcggatcaac
    12241 agctggtgct ggcgcagtta cggcaggtgt ttgcgtgttg gttgcggtag tatccacaga
    12301 cgctggcggc gtggacgttg tagccgggtc tgtagttgtc gacgtattta acggaacact
    12361 ctgcccctgc tcgctattac tgctcagttc cgccgaagat tgatcggcca tagtggtgat
    12421 ctcttcctgc tgagctttgt ggtcttgcca ccaccaggca ccgctcaggc cgataaccac
    12481 aaacagcacc agccaggtga aggtcatcag ccagccgtca cgttttttgc ggcgtttacc
    12541 gagggaaaaa ctctgcatcg gcgcaacttt cgcagcccgt agtggagcct gcttttccag
    12601 ccctggcagc agttcttctt ctggaatatg taccagacgc gcataagagc ggatatatcc
    12661 gcgcaggaat gttgaagcaa gatcggcggg tgccttatct tcttcaatgt cgcgtaccgt
    12721 ggaaaccttc aggcaaagtc gctcggcaac ggcctgctga ctaagtccta gttgttcgcg
    12781 agcattacgc aggcgagcgc cggtagtaag tgcttcattt tggtcgtgcg tggcttcagt
    12841 attcattcgc tgcaggtacg tttaaatgag aattgagatg ccggtgaacc atcatgctca
    12901 cccacaccgc gaaacatccg ttaagttaac cgttatcata cagtataaga ccgtctgtgt
    12961 gctcgtgaca aagcccacat tcactaaggc taacttactg ttgcatcgtt acatactgcc
    13021 ttaaagtcag caaaaacgca ccgttaatat tgaccagaca attgcaactt aatacttcat
    13081 tcataaaaga ttacgccacg gtacataaag taaccgtggc gtaatggcta tcagactgct
    13141 ttaatgtcga tggcttcacc ctgcatccgt ttacgcaggg tacgtttcgt acggtcgata
    13201 acatcgcccg ccaactgacc acaggcagca tcgatatcat caccacgagt tttacgcaca
    13261 atagtggtga aaccgtagct catcagcact tttgagaaac ggtcgatacg gctgttcgaa
    13321 ctgcgtccat acggcgcgcc cgggaacggg ttccacggga tcaggttgat cttacacggc
    13381 gtatctttca gcagctccgc cagttggtgc gcgtgttcag tgccgtcgtt aacgtggtca
    13441 agcatcacgt attcaatagt gactcggccc tgattggcgt tggatttctc cagataacgg
    13501 cgcaccgcag caaggaacgt ttcgatattg tactttttgt tgatcggcac aatttcgtca
    13561 cgaatttcgt cgttcggcgc gtgcagggaa attgccagtg caacgtcgat catatcgccc
    13621 agtttatcca gcgccggaac tacaccggaa gtagaaagcg tgacgcgacg tttagacagg
    13681 ccaaaaccga aatcatcaag catgatttcc atcgccggaa cgacgttgtt caggttgagc
    13741 agcggctcgc ccatgcccat catcactacg ttagtgattg ggcgctgacc ggtgactttt
    13801 gctgcgccga cgattttcgc cgcacgccac acctggccga taatttccga cacccgcagg
    13861 ttgcggttaa agccctgctg ggcggtggaa cagaatttac actccagcgc acaccccacc
    13921 tgcgaagaga cgcagagcgt ggcacggtcg tcttccggga tatacaccgt ttcgacgcgc
    13981 tgatcgccaa cggcgatcgc ccatttaatg gtgccgtcgg atgaacgctg ttcttcaacc
    14041 acttccggtg cgcggatttc cgccacctct ttcagtttgc cgcgcaacac tttgttgatg
    14101 tcggtcatct catcaaagtt gtcgcagcaa tagtgataca tccacttcat cacctgatcg
    14161 gcgcggaagg gtttttcacc taaatcttta aaaaactccc gcatctgctg acggttgaga
    14221 tccagcaggt tgatttttcc atctttcgtg gtgacgtttt caggtgtgac taattgttca
    14281 gacatatgct attccggcct cgttattaca cgttatggcc cctggagggt tgaaaaaaga
    14341 aacgccccgg tgagcggctg ctcgtccggg ggcgctgcat tgtacaaatt ctggcgcacg
    14401 gatgccacgt ttgcacgcgg catttacgaa attattaacg ggtgcgcggg cacacttcgc
    14461 cttcgccaaa gaaataagcg atttcgcgag cggcagattc gacggaatca gaaccgtggg
    14521 taccgttttc ggtcaggctg tcagcgtaat cagcgcgcag agtaccagcc agtgcgtttg
    14581 ccggattggt cgcgcccagc agatcgcggt gacgctgaac ggcgttttca ccttccagca
    14641 cggaaaccac gatcgggcca gaggtcatga attcaaccag accatcaaag aacggttttc
    14701 catcgtgttc agcataaaag ccacgtgcct gttcaacggt caggtgcagc attttggtgc
    14761 cgacaatttt gaaccctgca gcttcaaagc gcgcaaagat attaccaatg acgttttttg
    14821 ctaccgcgtt cggtttgatg atggaaaaag tacgttcaat agccattttt acctctgtaa
    14881 attgttctgt tgttgtctgt accagcgtac gagatggcgc ggattataat gagcaacagg
    14941 gccgttgact attgatgaag gtaacatttt tttaaaataa aatgagtttt agcaacaatc
    15001 agggacaaaa cagactattg catgacaaat ttcactgtcg cgatttgccc cacgtcatcc
    15061 atcaccagca attgataatc acctttatcc gtcaaatgca gggtcacgtt gcgcccgcgt
    15121 tcagttaacg gttcgccatt cagaaaccac cagcgttcac ctgcccctcc acttgattgc
    15181 aacggcaaag tcgcttccgc tgcgcccggt aaacgtttaa taatcgcgcc atcgcgaacg
    15241 cctgtcagct gcagcgggag ctgggcatcg tgaccgtatg gcgggcaact tgtcgaggcc
    15301 ggtggtaagc gcacagcgcg acgttctgat gcgggcagcc agggttccag cggtagcggc
    15361 cagacattta tcatttcttg tcgcgcttgc gggcaatcag cggcaacacg tttgccattt
    15421 tcatccagcc agatggggaa acgaatgcca ttaatgcctt cctgctccgg cagtaataga
    15481 gttggcggct gactcccgtc cagcagccag gttgccaggc ggcggcgaca gttaccgtca
    15541 ccttccggca aagactgtcc gcccggccag cagataacgc cacgagtgac tgagttcggg
    15601 cgcgggtctt ccggcagatt cgcactgcgc gacagtaaga tattattgac ctgattcaac
    15661 aatggtacgg cactggcaaa gccaaactga ccaacaacgg gcgtgccgtc cggtctgcca
    15721 gtccagatcc caatgacata gcgagcgtta accccaatcg cccaggcgtc acgatagcca
    15781 tagctggtgc ccgttttcca tgccagtggg gcgacgcgcg gcaaggcact atccggcaag
    15841 ggttgcgctt catcagccat aatccggcga atgatccacg ccgcccccga cgacattaaa
    15901 ggccgttcaa gcagcggatc gtcaggctgt aagcgcaatt tgcctgcctt gccgtggcga
    15961 gcaaacgcgg tatacgctgc cgccatatct tccagttttg caccagcgcc gccgagaatg
    16021 agtgaaagat tcggcgcagc accgttgggc aaatataacg gcaatccaac attgcgtaac
    16081 tttgccgcaa accgtttcgg tccataggct tccagcacct gcacagcagg taagttcagc
    16141 gagcgcacca gcgcctcgct catgctgatc gggccatgaa aaccgctatc aaagttacct
    16201 ggtcgataat caccggtgcg ccgggggacg tcttgcagca gtgatgccgg gtggatcaag
    16261 cgttcatcca gcgccagacc ataaacaaac ggtttgagca ccgatcctgg cgatcggatc
    16321 gcattgacca tatcaacatg accaaagcgt gaatcatcgt tgagatcaac cgatcccacc
    16381 cagccgcgaa cacgcatatc ggtatgatca accacgatca tcgccagtga gctgcgcggt
    16441 ggcaaccgcc ctttccagtt ttgcgccagt tcttccagac gtcgttgaag accggcatcc
    16501 agcgtagtaa cgattttgtc gcttttgctt ttaccgagca tcatgcgcga aaacagcggt
    16561 gccagttgcg gcatttgtcg gggtgccagc cagatgggtt cttcccttga ctcttttacc
    16621 tgctcacggg accacacacc ttgcacggcc atccgttcga gcactttatt acgcgcgcct
    16681 tcggcacgct ccggccaacg atccgggcgc actcggctgg gcgcttgcgg taacaccgcc
    16741 agcattgccg cctcggaata gcttaaattc gcaggcgatt ttccgagata agcccaactt
    16801 gccgcaccga tcccctgcaa cgtaccgcca aacggagcgc ggttaagata caagatcaga
    16861 atttcacgct tagacaaatg ccactccagt tgcaacgcgc gccagagctg gagaattttg
    16921 ccaccaaatg ttttggggtg aggatcaagc agacgagcaa cctgcatagt gagcgtgctg
    16981 ccaccagaaa taacccgtcc cgaagtgaga tcttgccatg ctgcgcgcgc caccgagaat
    17041 ggattcaccc ccggatgctt ccagaaccag cgatcttcat aattgatcag cgcttcaagg
    17101 taacgtggag acacatcttc gattgttacc ggataacgcc agatgccatc agcatcggcg
    17161 aagcgccaga gcggcgtacc atcctgcgcc acgaccactc gtgcgggatt gacttcatgc
    17221 agcggtagag gccagagttt atctgctccc cacgctgcaa gaaaaaggag aaatggcaca
    17281 gctgccagcg ttatccagca gccgcgtttg gttaacaagc gaagcattta cggtcggaca
    17341 atcagcagat cttcagccgc gccggtcgcc cgccattggg gaacatacat tgattccacc
    17401 atcggttgcg gtacctgata cgttcccggc gtcaccgccc gcgccagata caccagcgtt
    17461 accggttggt attcatcaac ggcaaccgcc gccacaaagc gatcgtcacg gaactcaatg
    17521 tgcttaatgc tcgcctgctg catctggttc agtaagtttt gcacttcgcc accactttgc
    17581 tccaggctgg cgctaccgtt cgccagattc tgattttcca gttccagacc cgcaggcagc
    17641 agatccacga ctaacgcatc cggcacgctg ttactggctt ttacctgcaa ccagaccagc
    17701 accagatcgc cgctacgtaa cgagtccagc gatttgctct taccatcagt accaagaata
    17761 tgacgctcga tttgcagcac attgttcgcc ggtaaaggtg cggattgcgg ataaccgctg
    17821 gcatccatac gcaaccataa cggctgatcg ccactgtttc tcacctgcaa ggtggcaagt
    17881 tgatcgctat tcagattgct gtttagcgtt ttctcgcctg tcagcggctc agctgagaaa
    17941 gaggtttgcg cctgccattt acccggtaaa tcctgaatcg tacgggcagc caggaacaac
    18001 gcgttacttt cctgcgtcga tagacagcgt tcaccaaacg cctgctgcga aagtgtgttc
    18061 agcaaagtgt actgctcatc gggtagcagt ttattttctt ccagcaagga gagcattaac
    18121 gcgttgtcgc gcagtggact accgtaatca cccagccata tccgctcatc actatttctc
    18181 ggcgttttca gcgccagcac aatcgcttct tcaccacgcg ttgcatcacc catggttttc
    18241 agcgcaatgc caagttgcag cagcggtaaa ccagaagcgg catctgcacg atgctcccag
    18301 atttcacgca gcgcacccag tggtgctttt tgctgacggg ccagcaccag cgcagcgtaa
    18361 gactgaacgg cgaatttact ggctttgaga ttatccgcgt acgggatcga catcatgccc
    18421 ggatcttgta aatagcgcag cagacgctca ttaccccggt taatggcgtc tgtcggcacg
    18481 ctgtaaccct gttcgcctgc gcggaccagg aaatccatca cgtaagccgt cagccagtac
    18541 tcttcgtcac cgtttttatc ccacagcgca aagccgccgt tatcacgttg catttgcagc
    18601 aaacgggaaa tgccgatatc gaccgatgca cggcgtttct catcactgtc gcctttgatg
    18661 cccaacgcct gcagttgggc tgcgttggta taaagtgacg ggaacaggcc gctggcggtt
    18721 tgctcaagac agccgtacgg atacgctttt aactctttga tataacgtgc aatgttcagc
    18781 ggtggtttgc cgctcaacaa caattgccct tccagcgtaa caggcgagaa gttttgcaat
    18841 ccatccgccg gaatcgccca tgtctcacca ggctgtaacg ccgtaccgta attaaccgtt
    18901 tgtgctggga acgccggacg gacgccgatt ttccactgct tatgctgatc ggcaacggtt
    18961 tcacccggta acgctaaccc gctaatggtg gcctgaattt ctccatcgcc ataacccggc
    19021 aatgctcgca ctgggataaa cagcgtagta cgcacacctg gcgctaattc aacggctgcg
    19081 ggtgaatcgc tgaccagttc aagcaaacca ctggcggtca gggcaacgtt cagtttttgc
    19141 ggtttatcgg taagattagt gatatccagc gtcagacgcg aggtatcgcc actcgccata
    19201 aagcgcggca tgttcagttc agcaatcacc ggtgcggcaa ctatcacttt gctttcgttg
    19261 ctaccgaaat catctgccgt ccaggcttgc gccatgacgc gcaattcacc gttaaaatcg
    19321 ccaatcggca gtgtaaccga gccttcgccc tgttcgttga gcgttaccgg cagcgcctgc
    19381 tgcgcgacaa tattgacgtg attgaccggc ggtttaccac cacgtttcag ctcatcacca
    19441 tcgccaccga aacgcagagc tgccagacgc ccctgacctt caataacctg accgtaaata
    19501 tcgtaaatgt ctgcgccata gcgtttctga ccaaagaacg cctgccacgg atctggcgtg
    19561 acgtagtcag taatattcag cacaccacta tcaacggcag acaccagcac attcacctgt
    19621 ttaggcttct cgccattttt agtgctggct ttaattttca cggttaatgg ttgattggga
    19681 cgcatttttg ctggtgtttc cagcgccaga tcgaggcgac ggttttcatc gccaagcggc
    19741 agatgcaaca caccaaccgc gcgttttggc gtcgcggagc gagatttatc gccaggacgt
    19801 accaccagcg tacttaaata cagatcatga cgattccagg ttttatcgac cggaatcgtc
    19861 agatccagcc cttgagccgg aacatcaatc tcttgccacc acagcggccc ttcactggac
    19921 tcgaccatcg cataaccttt acccgccgtt ggcgcggcga tatgcaactt aatggtgtcg
    19981 ccagggcgat aactggcttt atccagtttc agcgtgacac ggtcgggtcg cactgcgccg
    20041 ctaccgtcgc tgttgtcctg ccagctatag ccagcccaga aacgaacact actgaccgct
    20101 tcattcggcg ctttgacttc cagacgataa gcgccccact ctaccggaaa actgaccttg
    20161 ccggtttcgt ccgctttcag atccagagtt tgttcatttt cgatcagatc tttttgatca
    20221 aactgtgact gccagccttc atcttctgac cagttccagt agtaatcgcg gcgttcgcga
    20281 atcaggcgca cctgcaagcc cgacacggct tttttcacgc cttgtgcatc gctataaacg
    20341 atgtcaaaag cggcgttact gccttcatca acaatgggct gtttcaccgt gctgtcagtg
    20401 cgataatcgt aaaccgattt caaggcgaac tgcggacgga gccccggcaa tgcatcggca
    20461 ggccagatag cctgctcagc gcggcgcgtc accgggcgac cgcccgattc cagcaaactg
    20521 ccctggaaaa taacctgcaa tggggaatgc gtttccttcc actggctttc tgtagaaact
    20581 tcgccgcgcc ctttatcatc cagcgtcaac tgaacttcat ccagcgtgcg ggaaaggttt
    20641 tcggcagcta tatcgccgaa ttcaaaacca ggtaaggctg acacagcctc acgcagtggg
    20701 cgcaggaaaa gttgcccttg caaagtatta ccattagcag gcgcaccgta caggtagtat
    20761 cccaccacgg agaatttcac ttcatcattc ggcgtaagcg gggttttctc accggtcaga
    20821 ttcagcgcca tacgctctgg cataaaatct tcgacgtgga aatcccacat ccggtactgg
    20881 ttatcgcccg tgttggcgcg aatatgccac ataccggttg ccgcattgct atcgagtggc
    20941 caggtaaagt ggtagaggcc attctccggc tgactaacga cgctcctgag tacctgcccg
    21001 tcaggtttaa tcacgtctaa cttgatgggg tgatcgggca atgctttacc gtctgcatcg
    21061 cgcagtaaac cattgaggat taccgtttca cctgggcgat aaagatcgcg tgggccaaac
    21121 atgaaaaact gtttgctata gcctggcgcg ccagcaatgt taaattctgc taagtccagc
    21181 gccggaagtt ttaaatcgag tagcgttgtc tgaccgtctt tacgtgccag cagtaatgcc
    21241 gcatttttat cattttccag ctgcacatgc ccctgagcgt cactggttgc ctgagtcaga
    21301 gtctgccctt tctcatttaa taaagagact tcaattcctt gctgggccgc gccgttttcc
    21361 agactttggg taaagatatc cagacgattg tgataacggt gagctgaaac gccgatatca
    21421 cttaacgtaa acagcgtcgc gggattactg taatcgtaac gtccagcctg attcatcaca
    21481 gccagataca cgcccgcctg ctgaagcggt ttgatatcgc ccagcggcag caataatttt
    21541 tcacgggtgt tacgcgcagg attgagatca aaccgtccgg tgtagaccag atccgccatc
    21601 tgcagcagtt tgtctgactg ccagttcgcc agcgaattgc ggtattccca ttggctaatg
    21661 aatgctggca gagattctgg cttaacgcgg aagaagttaa catcgacatt attaacgttg
    21721 agcgccatta ccggcagccc ttcaacgact ttgccaggca gcagcgaacc acggctggca
    21781 aaaccgacgc tgggttggat gtcgcgggta gttatagttt tttcgtaatc tttactgaag
    21841 gttgcgttgt tgagtgcttt gacctccttg ccaatagtaa cgatcaaatc acgtttcggt
    21901 tcgaggtggc gtaaacgtag ctctttaaga ttatctgaca gctcccaggc accatccact
    21961 ttgccgcttt ttttatcgac gacatgaata acgcgtgaga aatcctgatc cgggtcgaga
    22021 gggatggaga acgtcagcac cagcgtggct gcaccatcaa gttggacttc agagagatcc
    22081 agcaatgtca gcaccttacc ggcactctgt tgggccagtt tttgtctctc cggcacggag
    22141 agttttgctg aactcgcgtt ttctgaagag gccgctttag taacttcaga aggcgcatct
    22201 tttttcaccg ctgttggcgc gttatcgttg ttgtcgcacc ctgccagcgc cagcattagc
    22261 atgcaggcgg ctacgcgtaa ctttttcatt tttcatccct gccacaatgg cccgttagca
    22321 acgtcgaata attattatgc gtgagaattt acgttatgta attcagtatc acgcccatac
    22381 aatccgaatt ttagtgagaa ttgtggctca gacagccaaa tcagcctctt tcgcttgtcg
    22441 cttttcacta aacatccgac aatttagcct aaccccggca aaaatggaga tgcctatgtc
    22501 cacgacatgg tttgtaggag ccgactggct cgccgaacat attgatgacc cggaaattca
    22561 gattatcgat gcccgcatgg cgtcgcctgg acaggaagat cgtaacgttg ctcaggagta
    22621 tctgaatgga catattcccg gcgcagtgtt ttttgatatc aaagcgcttt ctgatcacac
    22681 ttccccgctt ccgcacatgc tgccgcgccc ggaaacgttc gccgtggcga tgcgtgaatt
    22741 aggcgttaac caggataagc acctgattgt ctatgacgaa ggtaatcttt tctcagcccc
    22801 acgagcatgg tggatgctgc gcacctttag tgtagagaaa gtgtcgattc tggggggtgg
    22861 acttgcaggc tggcagcgcg atgatctgct gttagaagaa ggtgcagtag agctgccgga
    22921 aggagagttt aacgccgcgt ttaatcctga agccgtggtg aaagtaaccg atgtattatt
    22981 ggcaagccat gaaaatacgg cgcaaattat tgatgcccgc ccggctgcac gttttaacgc
    23041 agaagttgat gaacctcgcc caggtttacg tcgcggacat attcccggag cactgaatgt
    23101 tccgtggacg gaactggtgc gcgaaggcga actaaaaacg accgatgaac tggatgcgat
    23161 attttttggt cgcggcgtca gctacgacaa accaattatc gtcagctgcg gctctggtgt
    23221 aacggcagcc gtggttttgt tagcactcgc gacgctggat gtgccaaacg tgaaactgta
    23281 cgacggcgca tggagtgaat ggggcgcgcg ggcagattta ccggttgagc cagtgaaata
    23341 agtattttac aggcaataaa aaaccgccga atttggcggt tttttattgc tggtctggtt
    23401 cgcggccttt ccagcaggtt gtattaccgt agtaatgcaa gcgcgtctca gcggagacaa
    23461 tactcgccag taactctctt tttgtcaagc aaaagagagt tattattgtt ctgttagtat
    23521 attatccact gcggcccttt ccgccgtctc gcaagcgggc gctggcttaa ggaaaggata
    23581 ttgcgcgacc gttagagcaa gcgcgtctca gcgcttgcta tcgcggcaat atcgccagtg
    23641 gtgctgtcgt gatgcggtct tcgcatggac cgcacaatga agatacggtg cttctgtatc
    23701 gtacttattg tttctggtgc gctgttttcc caagtaaata ataaccgaag tctctccggc
    23761 gacaatttac tggtggttaa caaccttcag agcagcaagt aagcccgaat gccgcccttt
    23821 agggcggcat attttagatt atccggtttt gtttaaagtc acgcaaaaaa cctccccagc
    23881 gacgttcata gaatggcaca atatgttcgg taataaagtg gctaattcct ttttcccctt
    23941 ttttcacctg acaaatatcg attggttcat cgccaggtaa tgtatcggtc gctacacttc
    24001 ccgtcgcctg aataatttct tcgatatcac catcggcttc aatgccaata aataaattag
    24061 gctgtgcctc ttcgttctct ttaattgaac aaataaaagc acgcttcacc ggcttaatgg
    24121 ttttaaataa ggtggtgagt gaatcaatca tttgtgctgg cggctctgcg acttccgata
    24181 atatcagcga ttcaccgcct tccaggattt cctggctgct cagcggattt ccctcttcac
    24241 caatcaacaa actgatttca cgcggcataa attctttacc ggtcggcagt ttggcattaa
    24301 ggaagagcgt ttcgccaagg gtcatctcaa acaatgtgcg aacgggcatt acgacaaatg
    24361 cctgttcgtc ttcaaccgcc tgttgaagcg cttctaacga ggtgaaaaaa ggaatgacgc
    24421 tggtgccgtc ttctttttcc cagtgctgta aatcaagcgc actatcttca accacagcct
    24481 cgccctgcgc cgccgtacca ggcacccaga cggtggattc cagtagagta cggaaaaagg
    24541 ccgggcggtg cgccggttcg gttgctgctt tttccagcag gtcttcaagt tcgttttttg
    24601 tttcggacat aagaaccaca attcattcaa cgttcggggc gcaaatgcct gatgcgctac
    24661 gcttatcagg cctacaaggg attcgcaatt tgttgaattt gcagaatttg taggccggat
    24721 aaggcgttta cgccgcatcc ggcatattag tttacgccgt taacagatta gctatcgtgc
    24781 gcacaccaag tcccgtagcg cccgcagacc actgttcaac cggcgcttta cggtaagtcg
    24841 ccgagcagtc gatatgcagc cagccttgct gatagttctc aacaaagtgc gacaggaagc
    24901 ccgccgccgt gctcgcgcct gccggatacg ccgcgcttcc ggtattgttc agttcggcaa
    24961 agttagacgg cagctggctg cggtggaatt ccgccagcgg cagacgccag aatggttcgt
    25021 tctcttgtga ggcactcgcc agcaaacgac cggcaagcgc atcgtcaaaa ctgaacagcg
    25081 cgtgataatc attacccagc gcagttttcg ccgccccggt gagggtcgcc gcatcaatga
    25141 tcatttccgg tttctgcgca ctggcatcaa tcagaccatc ggcaagcacc agacgccctt
    25201 cggcatcagt gttcatcact tcaacttttt taccgttgcg ataggtgatg atatcgccca
    25261 gcttgaacgc attgccgcta atcaggttat ccgcacagca gaggaacagc ttcacgcgct
    25321 tgttcagtcc gcgcgtaatg gcaaatgcca gcgccccggt aaccgttgcc gcgccgccca
    25381 tgtccgactt catcgagtcc ataaacgcag tctgtttgat gctgtagccg ccggagtcaa
    25441 aagtgatacc tttacctacc aggcacgcgt acactggcgc ttctttatcg ccagttgggt
    25501 tgtaatccag cgccagcaat accggagaac gttctgaagc gcgtccgacg gtgtgcagcc
    25561 ccatataacc ttgctcacgc agatcttcgc ctttggtgat ccgataagtc acacgatcgc
    25621 ccgcgacgtt gctgatcaga tcaacagcac gctgtgccag ttgcgatggt cccaattctt
    25681 ctgccggtgc gttgatggtg tcacgcaccc agtcgatgat catcaggcgg ttatccagtt
    25741 cctggcgctg ggcatcgtcc agatccggcc actccacttt acgcgtgcct ttcggggctt
    25801 tgtaaccttg ccagaatgcc cagcagcgat ccgcatccca gccttcaccg cttaactgaa
    25861 catgcttgat gcccagaccg tcaatcttgc gcgccgcacg ctgaatcagc cccagatcgt
    25921 ctgccccgtt caaatgcagg gtaatgccgt cattattaat gctgtaagtt gctttttctc
    25981 cccagcgcgc gtcggcaggt tgggtagaga gggtaatctt catcgcttct gtcattttag
    26041 ttatccttct ttgtaaaagg gccgccagtt ggcagcccca ggatttttcc gctaaatgat
    26101 tcgcgttgca ggaaggcggc aagtgagtga agccccagga gcatagataa ctatgtgact
    26161 ggggtgaacg agcgcagcca acgcatctgc ggcgtgaagc atgacgcgga aattattcgg
    26221 cctcgtccag ccagactaac aaaatcgctt cgaggatttt ctcgttggat gcctgcgggt
    26281 cgtcgtcgaa atcttccaga tcgcaaatcc actgatgcat atcggtgaat cgaaccgttt
    26341 tcggatcaag atcaggatac gcatcgtaca gtgcttcgcc aatttcgcgg ctatcggtcc
    26401 acttaagtcc catactaacc tctgttaatg ctcacgcgca tggttgatag tgtaacgcgg
    26461 gatttcgact actaaatctt cgtcggtaac gcgtgcctgg cagcttaaac ggctttcggg
    26521 ctccagtccc caggctttgt ccagcatgtc gtcttcctgc tctgagcttt ctggcagcga
    26581 gtcaaaacct tcacgaacga tgcagtggca ggtggtgcaa gcacaggatt tttcacaggc
    26641 gtgttcaatc tcgataccgt tacgcagcgc tgcgtcgaga atggtttcac cgctattagc
    26701 ttccagaaca gcgccatcag ggcagaggtc ctgatgaggc aaaataacaa tctttggcat
    26761 attaaacctc gtccacggaa tggcctttca gcgcacgacg aaccgactgg tccatgcggc
    26821 gagcggcgaa atcctgggtt tgtttgtcta cgtttttaat cgcttgttcg atggcgtcaa
    26881 catcatcgcc ctgagccact tcactcaggt gagcggcagc attgtcaatg acctgacgct
    26941 ctgcggcgct taacagcgcg gcatcagcag ccagcgcgcc gtgcagactt tccagcacac
    27001 gcgccgcttc tactttttgt tctgccagca tacgggcttt tacgtcctgc tcggcatagc
    27061 tcattgaatc tttgatcatc gaagcgattt cgctatcggt cagaccgtaa gaaggtttga
    27121 cctgaataga cgcctcaacg ccggtggatt tctccatcgc cgtcacgctc aaaagaccgt
    27181 cggcatcgac ctggaacgtc acgcgaatat gcgcaccgcc agccggtagc gccggaatac
    27241 cacgcagcgc aaaacgcgcc agtgagcggc agtcctgcac cagttcgcgc tcaccctgca
    27301 ttacatggat agacatcgcc gtctgaccat ctttaaaggt ggtgaaatcc tgagcgcggg
    27361 ccaccggaat agtggtatta cgcggaatca ctttctccac caggccgccc atcgtttcga
    27421 ggcccagcga cagtgggatc acatcaagca gcagcatttc gctgtccggc ttgttaccca
    27481 ccagaatatc cgcctgaatc gccgcgccaa tagcgacgac tttatccggg tcgatggaag
    27541 tcagcggtgg acgaccgaaa aattcgccta cccgttcacg caccagcggc acgcgagtag
    27601 aaccgccaac catcaccact tccagcactt catcagcttc tacgcccgcg tctttcagcg
    27661 cacgacgaca agccagtaag gttcgtttta ccagtggcgc gatcagttca ttgaattgtt
    27721 cacggctgat ttcgccctgc cagcccgcaa cgttaacggt cacggagtcc gcatcgctca
    27781 gcgcgatttt ggctgcaatg gcggcatcca gcagttcacg ctgaacgcgg ttatcgctac
    27841 gatcaggaat gtccgcctgc tcgcgaatgt aatccgccag cagatggtcg aaatcatcgc
    27901 cgccgagcgc ggaatcaccg ccggttgcca gcacttcaaa cacgccgcga cttaagcgca
    27961 gaatggaaat atcaaacgtc ccgccaccga ggtcataaac ggcgatcacg ccttcctgac
    28021 cggaatccag cccgtaggcg atagccgcag cggtcggttc gttaagtaag cgcagaacat
    28081 gcaaccccgc cagacgcgcc gcgtctttgg tgccctgacg ctgggcatcg tcaaagtacg
    28141 ccggaacggt gataacgaca ccatccagct cgcctgccag ggcttcagtt gcccgcgccg
    28201 ccagtgcttt gaggatgtcc gcagaaacgc gcaccgggtt cagcagcccc gccgccgttt
    28261 caatcattgg caggccgttt tcgctggcct ggaattgata aggcaaatgc ggatagcgtt
    28321 gctggatatc agccagcgag cgtcccatca ggcgtttaac agaactaatg gtgttggcgg
    28381 tatcgagcgc tgcgttagta cgcgcgtcat aacccaccga atgcccttgc tgttgatagt
    28441 gaacaacaga tggcagcagg tgacggcctt catggtcggc taacgtttcg gcctgaccgc
    28501 tgcgcactgt cgctaccagc gagttggttg tgcccaggtc aataccggcc gccagacgac
    28561 gctgatgcgg cgcagcactc aaaccaggtt cactaatttg taataaggcc atgtttagct
    28621 tccagaaatt aaaaatcgag cagtttttct tcgagttgtt cggcactgct tcgcagttta
    28681 tcgagaaaac gcagcttacg cacggtatcc gccgccgcgt cccacgtctc gttgtctaac
    28741 tgttcaacca tcaactgatg gcgggtatca aacatctttt tcacacgttt aataaagctt
    28801 tccagccgcg cttcatcttt cgcctgttcg atctcgtcca gttcttcgcg cagctccagc
    28861 tgttccatca ggaacgcggt gtcgcgcaca gtatgctgct cgctggcgag atcaaaaccg
    28921 tgcaaagaaa gcaaatattc cgcgcgcatt aacggatgac gcagcgtttg ccaggcctgg
    28981 ttaatggttg cagattgctg tacggcggcg agttgttccg cctggcttcc gctggcgaat
    29041 ttatcaggat gatactgacg ttgtagatcc tgaaaacgca ggctcagtgc ctgggtatcg
    29101 agttgataac gggcaggcaa gccaaagagg gtgaagtaat ccataacatt ctcagggctg
    29161 cgatccgccg cgataacggc gaatcaggta aaacaaaccc cacgcgcagg cgaccacggt
    29221 ggggttatcg gtatgcgcat caaacgtgga agctttcgcc gcaaccacac tcatctttaa
    29281 cgttcgggtt ggtgaattta aacccttcat tcaggccttc ttttacgaag tccagctgcg
    29341 taccgtccag aaattgcagg cttttgccat cgaccacgac tttcacgcct ttgtcttcaa
    29401 acacgatgtc ttccggcgtc ggttcgtcaa caaattccag tacataagcc atacctgaac
    29461 atccggaggt tctcacgccc agacgcaggc caaacccttt gccgcggtta gccagaaagg
    29521 tatttactcg cgctgctgca ctgtcgctca gtgtaatcga cataaccaaa cctcaactct
    29581 tattttgctt cacgtttgct tttatagtcc gcaatggcgg ctttgatcgc gtcttctgcc
    29641 agaatagaac agtgaatttt caccggcggc agttcaagtt cttcagcaat atcggtgttt
    29701 ttgatcgcct gcgcttcgac gagagacttc cctttcaccc attcggtgac cagggagctg
    29761 gaagcgatag cagaaccgca gccgtaagtt ttaaaacgcg cgtcttcaat gataccttca
    29821 tcgttgactt taatctgcaa cttcatcacg tcgccacagg ccggtgcacc caccatgccg
    29881 ctgccgacgt tctcgtcgtt gttgtcaaag gaacccacgt tacgcggatt ctcgtaatgg
    29941 tcgataactt tttcgctgta agccattata aattctcctg attccgatac cgattaatga
    30001 tgagcccatt cgatgctgtt cagatccacg ccctgcttgt acatttccca cagcggagaa
    30061 aggtcacgca gacgaccgat ggatttacga actaactcga tggtgtagtc gatctcttct
    30121 tcagtagtaa aacgacctaa agagaaacgg atagagctat gtgccagctc gtcgttcagc
    30181 cccagcgcgc gcagcacgta ggacggttcg aggcttgctg acgtacaggc ggaacctgaa
    30241 gaaactgcga ggtctttcag cgccataatc agtgactcac cttcaacgta gttgaagctg
    30301 acgttgagaa tgttcggcgc accgtgttcc aggtcaccgt tcaggtaaac ttcttcgata
    30361 tctttgatgc cgttccacag acggttacgc aggccgcgca gacgttccat ctcggtcgcc
    30421 atctcttctt ttgcgatgcg ataggcctcg cccattccga cgatctggtg aacaggcaga
    30481 gtgccggaac gcataccgcg ctcgtgaccg ccgccgtgca tttgcgcttc gatgcgtacg
    30541 cgcggtttac gacgtacata cagcgcaccg atacctttcg ggccatagat tttgtgaccg
    30601 gagaaagaca tcaggtcaac tttcaactgg ctcaggtcga taggcagttt gcccacgctc
    30661 tgggttgcat caacgtgata gataatgcca cgagcacggc acatttcgcc gatagccgcg
    30721 atatcctgca ccacgccgat ttcgttattt acgtgcatga tggaaacaag gatggtgtcg
    30781 tcacgcatcg ctgcttcaag ttctttcagg tcgataatgc cgttacgctg cggtgccagg
    30841 taggtgactt caaaaccttc gcgctccagc tgacggcagg tatccagtac cgctttgtgt
    30901 tcggttttgc tagtgatgat gtgcttgcct tttttctgat aaaagttggc tgcacctttg
    30961 atcgccaggt tgtcagattc ggttgcacca gaggtaaaga cgatttcacg cggatcagcg
    31021 ccgaccagat cggcaatctg attacgggcg atatctaccg cttcttcagc ctgccagccg
    31081 aaacggtgag aacgagaggc cgggttacca aaggttccgt ccatcgtcat gaactgcatc
    31141 attttctcgg caacacgcgg gtccaccggc gtggttgcgg agtagtcgag ataaatcggt
    31201 aatttcattg ctctataaac tccgtacatc actcaatgca aggaatcagg ctaccggctg
    31261 gatgtacgac cgtgtttacg gagtatttag cactccggcc tgattctgaa ttctttttat
    31321 taagcgcgta acttaacgtc gatcgcgtct tgtgtgcggg tgcgtggcgc gtcgtgagta
    31381 tgctgacgac cagacacatc cagcacttcc tggttattaa ccagttcgcc taaagtaatg
    31441 ttgttgagaa aaccggtgag acggtcgctc aaatcacgcc acagcgcgtg ggtcaggcat
    31501 ttatcgccgc cctggcagcc gcctttaccc tgacaacggg tggcatctac agattcgtca
    31561 acggcgctaa tcacttcgcc aacggcgatg ctgctggcat ctttgcctaa cagataacca
    31621 ccgcctggtc cacgtacgct ggaaaccaga ccatttttac gcagacggga aaacagttgt
    31681 tccagataag aaagggaaat tccctgacgt tcggaaatat cagccaacgg taccgggccc
    31741 gcttcagagt tgagcgcaac gtcaagcatt gcggtcacgg catagcgccc tttagatgtc
    31801 agtctcatgt cttacttcac ctcaaactcg cccctgcccg gggtttttta ttgtaaaagt
    31861 gggggtattg aatagcaggg tcaagtctga cattcccgag taaattggtc aactatttac
    31921 ttgactgatt tagtcgggta tttaaccttc agtgccattt ttttatcgtg gcgtttgtac
    31981 ctgttgtcgg atgcggtgtg aacaccttat ccgacctacg gttctgtaca ttgtaggcct
    32041 gataagacgc gttaagcgtc gcatcaggca actactgtta ttcggccttg ttacctttat
    32101 tctgctgctc aatagaagcc agaatcccgc gcaggatatt caattcctgg ctttccgggc
    32161 gcgcacgggt aaacagacgg cgcaatttat tcatcacctg ccccggatgg ttttcacgga
    32221 taaaaccggt tgccagcagc gtttgttcca gatgaccata aaaacgctcc agatcatcga
    32281 ccagcggata cggcgtctct tcatgctcga cctgctcgcc gttttcctga gttgccagcc
    32341 aggccatgcg cacttcatag gcaataacct gaaccgccat cgccaggttc agcgagctgt
    32401 attccgggtt agccgcaatc gcgacatgat aatggcattt ctgcaactct tcattggtca
    32461 agccgacgcg ctcgcgacca aacaccagcg ccaccggggt atttgccgct tcagcgacgc
    32521 ttttcaggcc gcattcgcgc gggtcgagca tcggccatgg cagcgtgcgg gaacgtgcgc
    32581 tggtgcccac caccaagcta caaccggcta acgcttcgtc gagcgtatcg acgatgtgag
    32641 cattaccaat cacatcgctg gcccctgctg ccagggcaat cgcctgggag tcgggtttca
    32701 ccagtggatt aaccagccac agattggtta atcccattgt tttcatggca cgggcaacag
    32761 aacccatatt gccggtgtgt gacgtctcca ccagcacaat tcgaatattt tgcagcattg
    32821 tctttcttca tctaaagatt attcacgcat cttatcataa aacgaagaca gatgccgatc
    32881 tcgctgctat actctgcgcc gttttcccgt tctttaacat ccagtgagag agaccgatgc
    32941 atccgatgct gaacatcgcc gtgcgcgcag cgcgcaaggc gggtaattta attgccaaaa
    33001 actatgaaac cccggacgct gtagaagcga gccagaaagg cagtaacgat ttcgtgacca
    33061 acgtagataa agctgccgaa gcggtgatta tcgacacgat tcgtaaatct tacccacagc
    33121 acaccatcat caccgaagaa agcggtgaac ttgaaggtac tgatcaggat gttcaatggg
    33181 ttatcgatcc actggatggt actaccaact ttatcaaacg tctgccgcac ttcgcggtat
    33241 ctatcgccgt tcgtatcaaa ggccgcaccg aagttgctgt ggtatacgat cctatgcgta
    33301 acgaactgtt caccgccact cgcggtcagg gcgcacagct gaacggctac cgtctgcgcg
    33361 gtagcaccgc tcgcgatctc gacggtacca ttctggcgac cggcttcccg ttcaaagcaa
    33421 aacagtacgc cactgcctac atcaacatcg tcggcaaact gttcaacgaa tgtgcagact
    33481 tccgtcgtac cggttctgcg gcgctggatc tggcttacgt cgctgcgggt cgtgttgacg
    33541 gtttctttga aatcggtctg cgtccgtggg atttcgcggc aggcgagctg ctggttcgtg
    33601 aagcgggcgg catcgtcagc gacttcaccg gtggtcataa ctatatgctg accggtaaca
    33661 tcgttgctgg taacccgcgt gttgtgaaag ccatgctggc gaacatgcgt gacgagttaa
    33721 gcgacgctct gaagcgttaa tgactcaggc gggtgatgtc actcacccgc cctcgccttt
    33781 caggcgctat tccgaaatac ttcctcaccg ctttactttc tttcgtcact ctcccaccat
    33841 ctttccccga ttaatggatg ataaagaagt cacaaggaaa ggttatggcg ctgccagtga
    33901 acaaacgcgt tctcaaaatt ctgtttattc tctttgttgt tgccttctgc gtttatttag
    33961 tgccgcgcgt tgccatcaac ttcttctatt atcctgacga taaaatttac ggtcccgacc
    34021 cctggtcggc ggaatccgtc gaatttacgg ctaaggacgg tactcgtctg caaggctggt
    34081 ttattccttc ttcgacgggc cctgctgaca atgccatcgt aaccatcatt catgctcacg
    34141 gcaatgccgg aaatatgtcc gcccactggc cgctggtcag ttggttaccc gagcgtaatt
    34201 tcaacgtttt tatgtttgat tatcgcgggt ttggtaaatc aaaaggcacg ccgtcccagg
    34261 ccggattgct ggacgatacg caaagtgcca tcaatgtggt gcgccatcgc agtgatgtaa
    34321 acccacaacg actggtgctg ttcgggcaga gtattggcgg ggcgaatatt cttgctgtta
    34381 ttggtcagga tgatcgtgaa ggcatacgtg cggtgatcct cgactccaca tttgcctctt
    34441 atgcaaccat cgccaatcag atgatccccg gcagtggcta cttacttgat gagagttaca
    34501 gcggcgaaaa ttatatcgcc agcgtcagcc cgatcccgct tttactcatt cacggtaaag
    34561 ctgatcacgt tatcccatgg cagcacagcg aaaagttgta tagcctggca aaagagacaa
    34621 aacggttgat cctaatcccg gatggcgaac acattgatgc tttttccgat cgtcacggcg
    34681 atgtttatcg cgaacagatg gtggacttta tccttagcgc gttgaatccg cagaactaac
    34741 ccatgatcgc tagcacgata atcattcaca aaaccacctt aagacatgct aatccactgg
    34801 tcagaacagt ttaagatgag aaaaattctg tgacgcttgc caacatttct gatgattagc
    34861 attcccttcg ccatgtccct gagcaaactt tagctattct tatcaattat gcttatggga
    34921 gatctacaga tgatgcctac gcttgctcca ccatctgtcc tttcggctcc ccagcgccgc
    34981 tgccagatct tgctgacgct ctttcagccg gggttgaccg ccaccatggc aaccttcagc
    35041 gagcttaatg gtgtggatga tgatattgcc agtcttgata tcagcgaaac aggacgggag
    35101 atcctgcgct atcatcaact cacactgacg actggttatg acggtagcta ccgggttgaa
    35161 ggtacagtgc ttaaccaacg tttgtgttta tttcactggc tacgacgtgg tttccgtctg
    35221 tgtccgtcat ttattaccag ccaattcacc cccgccctga agagtgaact gaagcggcgc
    35281 ggaattgcgc gtaactttta cgacgatacc aatctacaag cgttagtgaa tctctgctcc
    35341 cgacggctgc aaaaacgctt tgaaacgcgc gatattcatt tcctgtgtct gtatctgcaa
    35401 tattgtttgc tgcaacacca cgctggaatt acgcctcagt ttaatccgct ccaacgtcgc
    35461 tgggcggaat cctgccttga atttcaggta gcgcaggaaa ttggacgcca ctggcagcgt
    35521 cgggcgctcc agcctgtacc gcctgatgag ccactgttta tggcattact tttttccatg
    35581 ttgcgggttc ccgatccatt gcgtgatgcg catcagcgag acagacaatt gcgtcagtct
    35641 atcaaacgtc tggtaaacca ttttcgtgag ctgggaaatg ttcgttttta tgatgaacag
    35701 gggttatgcg atcagcttta tacccacctc gcccaggcgt taaatcgcag tttgtttgcc
    35761 atcggtattg ataataccct gccagaagag ttcgccagac tgtacccacg cctggtgcgc
    35821 accacccgcg cggcgctggc cggatttgaa agtgaatacg gcgtccatct ttctgatgag
    35881 gaaagtggtc tggtcgcagt gattttcggt gcctggctaa tgcaggaaaa cgatctgcat
    35941 gaaaaacaga ttattcttct taccgggaat gatagcgagc gagaagcgca gattgagcag
    36001 cagttacgcg aactaacgtt actgccgctc aacattaaac atatgtcggt aaaggcattt
    36061 ttgcagacag gcgctccgcg cggcgcggcg cggcactgat tattgcgcct tataccatgc
    36121 cgttaccgct cttttcacca ccgctgatct atacggacct gacactgaca acacatcaac
    36181 aggagcagat ccgcaaaatg ctcgaatcag catgagggaa caactttcgg gcgcaaaaac
    36241 attgccggaa gcgccaccag cgccattacc cagaacacgc cgtggcccag atattgatac
    36301 aggaaaccgg tgaaaacggt catgatagct atactgccgc ccatcgcgac ggcagagtaa
    36361 accgcctgta aacggatgac ttcgctaccc tggcgagcgg caatatagcg catggcggcc
    36421 aggtggcaga ccgtgaaggt gccgcaatgc agaatttgca ccactatcaa ccacggcaac
    36481 gccgtagttg ctcccataat gccccagcgc actacgccgc aaatcgccga gatcaacagc
    36541 atatcgcgtg cactacaacg gcggaaaagt ttattactca gcgcaaagat aatgacttcc
    36601 gccaccacgc ccagcgacca caaatacccc accgccgagg ccgagtagcc agctgcctgc
    36661 cagtaaatgg cgctaaaacc gtaataggcc gcatgtgccc cctgcaataa acaaacgcag
    36721 gccagaaagc gccagttctg aagaaccagc gccaaccacg ctgaccaacc ggtgctctcc
    36781 tgctggcggc ttgccccttg tggctgaatc gtcggacgga tgagaaagcc gagcagcatg
    36841 gatgccacgc ccaatgttaa cagcgcgagg atcacctgat aatcaaacat agtgaccagt
    36901 ttgcccgtca gcgccgagcc aatgacaaac gccaccgagc cccacagtcg cactttgccg
    36961 taatcaagcg ggaactgctt ttgccacgta ttcgccagtg catcggtcaa cggtaccagc
    37021 ggtgagaaaa agaggttaaa gccaatcatc accagcatca gccacgctac gtgcgccccc
    37081 gcccagaagg cgacagcaaa gagaagtgtc atcattgcca gcacgcgcaa ggcggaaatc
    37141 aggcgagaag gatcgctgac gcggggcgcg atgagcaaac tcccgagaaa acgggcaacc
    37201 agacctgccc ccaataacag gccgatggtt tctggcgtta aaccaatccc tttaagccag
    37261 acgctccaga aaggtagaaa aatgccgtaa ctaaaaaagt atgtgaaata gccgagcgcc
    37321 aaccagcgcg tggattgcaa aaccatgagt ccctcccgtc aggaggcgtt agtctggggt
    37381 taatcgaatg ttggtgcaag ttgaaaaata agaatattcg agcctgcttc ccgatgtctg
    37441 taacgccagt tcacaagcac taaaaaactg cgatccgcga cgcatgttgc aaaaataatg
    37501 cgtaattatg ccgttacgct tgccaaacgt tcctgcacaa tggcgatgaa atcacgtaat
    37561 gccggcttca tctccccttt cttccacgcc atcagtaaag caatggaagg cacatttccg
    37621 gcaatgggac gaaaaacaac ctgtccggta ttaaaattat tcatataacc gggtatcaaa
    37681 gtgacgccca gccccatgcc caccagattc atggtcacca gaatattcgt tgccacctgg
    37741 acgatatttg gctggctgtt ttcttgcgca aaccacgctt taacgatcgg cgcaagcgaa
    37801 ccggaatacg ccggatcggt actgacgaaa ttcacgccat ccagttgcgc ggcggtgatc
    37861 tctttttcat gtgctaaagg gtgatcaacc ggtaacacaa ccactaatgg ttcgtcaaaa
    37921 agctccagat aatcaatctc cgggctataa acaggatgg
//
LOCUS       DADMHC010000015        37721 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.015, whole genome shotgun sequence.
ACCESSION   DADMHC010000015 DADMHC010000000
VERSION     DADMHC010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 37721)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37721)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37721
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.015"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(1..1147)
                     /locus_tag="JNZ57_000610"
                     /pseudo
     CDS             complement(1..1147)
                     /locus_tag="JNZ57_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016234052.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
     gene            complement(1270..1722)
                     /locus_tag="JNZ57_000611"
     CDS             complement(1270..1722)
                     /locus_tag="JNZ57_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF386 domain-containing protein"
                     /protein_id="HAY8826932.1"
                     /translation="MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRL
                     FYLISEDMTEPHEARRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAF
                     LPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPARVRKAVVKMLMA"
     gene            complement(1867..2460)
                     /locus_tag="JNZ57_000612"
     CDS             complement(1867..2460)
                     /locus_tag="JNZ57_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313255.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HAY8826933.1"
                     /translation="MVTKKQSRVPGRPRRFAPEQAVSAAKVLFHQKGFDAVSVAEVTD
                     YLGINPPSLYAAFGNKAGLFSRVLNEYVGTEAIPLADILRDDRPVGECLAEVLKEAAR
                     RYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQSAQCVTDFM
                     STVMSGLSAKAREGHSIEQLCATAALAGEAIKTILKE"
     gene            2531..3244
                     /gene="bdcA"
                     /locus_tag="JNZ57_000613"
     CDS             2531..3244
                     /gene="bdcA"
                     /locus_tag="JNZ57_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY8826934.1"
                     /translation="MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAA
                     ERLAQETGATAVFTDSADKDAVIDVVRKSGALDILVVNAGIGVFGDALELNADDIDRL
                     FKINIHAPYHASVEAVRQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGL
                     ARDFGPRGITINVVQPGPIDTDANPANGPMRDMSHSFMAIKRHGQPEEVAGMVAWLAG
                     PEASFVTDAMHTIDGAFGA"
     gene            3375..3770
                     /locus_tag="JNZ57_000614"
     CDS             3375..3770
                     /locus_tag="JNZ57_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HAY8826935.1"
                     /translation="MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGT
                     PEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPEKQFEDIMTVKNEIFSAP
                     PYPTWTAVGVTWLAGFDFEIKVIARIPEL"
     gene            4050..4184
                     /gene="pyrL"
                     /locus_tag="JNZ57_000615"
     CDS             4050..4184
                     /gene="pyrL"
                     /locus_tag="JNZ57_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyr operon leader peptide"
                     /protein_id="HAY8826936.1"
                     /translation="MVQCVRHFVLPRLKKDAGLPFFFPLITHSQPLNRGAFFCPGVRR
                     "
     gene            4188..5123
                     /gene="pyrB"
                     /locus_tag="JNZ57_000616"
     CDS             4188..5123
                     /gene="pyrB"
                     /locus_tag="JNZ57_000616"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HAY8826937.1"
                     /translation="MANPLYQKHIISINDLSRDDLNLVLATAAKLKANPQPELLKHKV
                     IASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDA
                     IVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAM
                     VGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEE
                     VMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIAT
                     DVDKTPHAWYFQQAGNGIFARQALLALVLNRDLVL"
     gene            5136..5597
                     /gene="pyrI"
                     /locus_tag="JNZ57_000617"
     CDS             5136..5597
                     /gene="pyrI"
                     /locus_tag="JNZ57_000617"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000148566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HAY8826938.1"
                     /translation="MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITI
                     GLNLPSGEMGRKDLIKIENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPER
                     IDNVLVCPNSNCISHAEPVSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN"
     gene            5670..6056
                     /gene="ridA"
                     /locus_tag="JNZ57_000618"
     CDS             5670..6056
                     /gene="ridA"
                     /locus_tag="JNZ57_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418664.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminobutanoate/2-iminopropanoate deaminase"
                     /protein_id="HAY8826939.1"
                     /translation="MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPA
                     DVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATF
                     PARSCVEVARLPKDVKIEIEAIAIRR"
     gene            complement(6262..8958)
                     /gene="mgtA"
                     /locus_tag="JNZ57_000619"
     CDS             complement(6262..8958)
                     /gene="mgtA"
                     /locus_tag="JNZ57_000619"
                     /EC_number="7.2.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium-translocating P-type ATPase"
                     /protein_id="HAY8826940.1"
                     /translation="MFKEIFTRLIRHLPSRLVHRDPLPGAQQTVNTVVPPSLSAHCLK
                     MAVMPEEELWKTFDTHPEGLNQAEVESAREQHGENKLPAQQLSPWWVHLWVCYRNPFN
                     ILLTILGAISYATEDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVL
                     RVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLP
                     VEKAATTRQPEHSNPLECDTLCFMGTTVVSGTAQAMVIATGANTWFGQLAGRVSEQES
                     EPNAFQQGISRVSMLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLP
                     MIVTSTLARGAVKLSKQKVIVKHLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS
                     GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERR
                     RMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQ
                     GLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGITVK
                     ILTGDSELVAAKVCHEVGLDAGEVVIGSDIETLSDDELANLAQRTTLFARLTPMHKER
                     IVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLE
                     EGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVS
                     QVAIPFDNVDDEQIQKPQRWNPADLGRFMIFFGPISSIFDILTFCLMWWVFHANTPET
                     QTLFQSGWFVVGLLSQTLIVHMIRTRRVPFIQSCASWPLMIMTVIVMIVGIALPFSPL
                     ASYLQLQALPLSYFPWLVAILAGYMTLTQLVKGFYSRRYGWQ"
     gene            complement(9099..9152)
                     /gene="mgtL"
                     /locus_tag="JNZ57_000620"
     CDS             complement(9099..9152)
                     /gene="mgtL"
                     /locus_tag="JNZ57_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_003933616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mgtA regulatory leader peptide MgtL"
                     /protein_id="HAY8826941.1"
                     /translation="MEPDPTPLPRQRLKLFR"
     gene            9337..10302
                     /gene="treR"
                     /locus_tag="JNZ57_000621"
     CDS             9337..10302
                     /gene="treR"
                     /locus_tag="JNZ57_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001181347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator TreR"
                     /protein_id="HAY8826942.1"
                     /translation="MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMN
                     QHGFSPSRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPEFYEQGYDPIMMESQF
                     SPQLVAEHLGVLKRRNIDGVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDE
                     GAIKILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAM
                     KQGYENVAKVITPETTALLCATDTLALGASKYLQEQRIDTLQLASVGNTPLIKFLHPE
                     IVTVDPGYAEAGRQAACQLIAQVTGRSEPQQIIIPATLSRSFPER"
     gene            10403..11824
                     /gene="treB"
                     /locus_tag="JNZ57_000622"
     CDS             10403..11824
                     /gene="treB"
                     /locus_tag="JNZ57_000622"
                     /EC_number="2.7.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS trehalose transporter subunit IIBC"
                     /protein_id="HAY8826943.1"
                     /translation="MMSKINQTDIDRLIELVGGRGNIATVSHCITRLRFVLNQPANAR
                     PKEIEQLPMVKGCFTNAGQFQVVIGTNVGDYYQALIASTGQAQVDKEQVKKAARQNMK
                     WHEQLISHFAETFFPLLPALISGGLILGFRNVIGDLPMSNGQTLAQMYPSLQTIYDFL
                     WLIGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQLPEVWDF
                     GMFSIAKVGYQAQVIPALLAGLALGVIETRLKRIVPDYLYLVVVPVCSLILAVFLAHA
                     LIGPFGRMIGDGVAFAVHHLMTGSFAPIGAALFGFLYAPLVITGVHQTTLAIDLQMIQ
                     SMGGTPVWPLIALSNIAQGSAVIGIIISSRKHNEREISVPAAISAWLGVTEPAMYGIN
                     LKYRFPMLCAMIGSGLAGLLCGLNGVMANGIGVGGLPGILSIQPNYWQVFALAMAIAI
                     IIPIVLTSFIYQRKYRLGTLDIV"
     gene            11874..13529
                     /gene="treC"
                     /locus_tag="JNZ57_000623"
     CDS             11874..13529
                     /gene="treC"
                     /locus_tag="JNZ57_000623"
                     /EC_number="3.2.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709962.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-phosphotrehalase"
                     /protein_id="HAY8826944.1"
                     /translation="MTNPPHWWQNGVIYQIYPKSFQDTTGSGTGDLRGVIQRLDYLHK
                     LGVDAIWLTPFYVSPQVDNGYDVANYTAIDPTYGTLDDFDELVTQAKSRGIRIILDMV
                     FNHTSTQHAWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYY
                     LHLFAPEQADLNWENPAVRAVLKKVCEFWADRGVDGLRLDVVNLISKDPRFPDDLDGD
                     GRRFYTDGPRAHEFLHEMNRDVFTPRGLMTVGEMSSTSLEHCQRYAALTGSELSMTFN
                     FHHLKVDYPGGEKWTLAKPDFVALKTLFRHWQQGMHNVAWNALFWCNHDQPRIVSRFG
                     DEGEYRVPAAKMLAMVLHGMQGTPYIYQGEEIGMTNPHFTRITDYRDVESLNMFAELR
                     NDGRDADELLAILASKSRDNSRTPMQWSNGDNAGFTAGEPWIGLGDNYQQINVEAALA
                     DDSSVFYTYQKLIALRKQEAILTWGNYQDLLPNSPVLWCYRREWKGQTLLVIANLSRE
                     IQPWQPGQMRGNWQLVMHNYEEASPQPCAMNLRPFEAVWWLQK"
     gene            13923..16061
                     /gene="nrdD"
                     /locus_tag="JNZ57_000624"
     CDS             13923..16061
                     /gene="nrdD"
                     /locus_tag="JNZ57_000624"
                     /EC_number="1.17.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004128226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HAY8826945.1"
                     /translation="MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAA
                     VVSEQMQGRNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEI
                     RGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIH
                     YHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASH
                     IYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEY
                     EVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFVI
                     RDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE
                     NENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLE
                     GVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASLSLGYIGIHETINALFGGEHVY
                     DNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPG
                     VTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDV
                     WDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGY
                     LGSPDARPFNAGKQEEVKRRVKHLGNGQIG"
     gene            16251..16715
                     /gene="nrdG"
                     /locus_tag="JNZ57_000625"
     CDS             16251..16715
                     /gene="nrdG"
                     /locus_tag="JNZ57_000625"
                     /EC_number="1.97.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate
                     reductase-activating protein"
                     /protein_id="HAY8826946.1"
                     /translation="MNYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRVNSG
                     QPFTKAMEDQIINDLNDTRIKRQGISLSGGDPLHPQNVPDILKLVQRIRAECPGKDIW
                     VWTGYKLDELNAAQMQVVDLINVLVDGKFVQDLKDPSLIWRGSSNQVVHHLR"
     gene            complement(16760..17146)
                     /gene="cybC"
                     /locus_tag="JNZ57_000626"
     CDS             complement(16760..17146)
                     /gene="cybC"
                     /locus_tag="JNZ57_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313240.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b562"
                     /protein_id="HAY8826947.1"
                     /translation="MRKSLLAILAVSSLVFSSASFAADLEDNMETLNDNLKVVEKADN
                     AAQVKDALTKMRAAALDAQKATPPKLEGKSPDSPEMKDFRHGFDILVGQIDDALKLAN
                     EGKVKEAQAAAEQLKTTRNAYHQKYR"
     gene            complement(17330..18682)
                     /gene="pmbA"
                     /locus_tag="JNZ57_000627"
     CDS             complement(17330..18682)
                     /gene="pmbA"
                     /locus_tag="JNZ57_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HAY8826948.1"
                     /translation="MALAMKVISQVEAQRKILEEAVSTALELASGKSDGAEVAVSKTT
                     GISVSTRYGEVENVEFNSDGALGITVYHQNRKGSASSTDLSPQAIARTVQAALDIARY
                     TSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEG
                     GSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGRAMSDLQT
                     PEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFL
                     LDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTSYSA
                     RKLGLKSTGHAGGIHNWRIAGQGLSFEQMLKEMGTGLVVTELMGQGVSAITGDYSRGA
                     AGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKIAGQ
                     "
     gene            18776..19327
                     /locus_tag="JNZ57_000628"
     CDS             18776..19327
                     /locus_tag="JNZ57_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000166269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HAY8826949.1"
                     /translation="MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGA
                     EIVDLGKNALDKIPLDADLRAAIELAQRIKMEGRRRQLQLIGKMLRQRDVEPIRQALD
                     KLKNRHNQQVVLFHKLENLRDRLIDQGDDAIAEVLNLWPDADRQQLRTLIRNAKKEKE
                     GNKPPKSARQIFQYLRELAENEE"
     gene            complement(19410..20783)
                     /gene="mpl"
                     /locus_tag="JNZ57_000629"
     CDS             complement(19410..20783)
                     /gene="mpl"
                     /locus_tag="JNZ57_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HAY8826950.1"
                     /translation="MRIHILGICGTFMGGLAMLARQLGHEVTGSDANVYPPMSTLLEK
                     QGIELIQGYDASQLDPQPDLVIIGNAMTRGNPCVEAVLEKNIPYMSGPQWLHDFVLRD
                     RWVLAVAGTHGKTTTAGMATWILEQCGYKPGFVIGGVPGNFEVSARLGESDFFVIEAD
                     EYDCAFFDKRSKFVHYCPRTLILNNLEFDHADIFDDLKAIQKQFHHLVRIVPGQGRII
                     WPENDINLKQTMAMGCWSEQELVGEQGHWQAKKLTTDASEWEVLLDGEKVGEVKWSLV
                     GEHNMHNGLMAIAAARHVGVAPADTANALGSFINARRRLELRGEANGVTVYDDFAHHP
                     TAILATLAALRGKVGGTARIIAVLEPRSNTMKMGICKDDLAPSLGRADEVFLLQPAHI
                     PWQVAEVAEACVQPAHWSGDVDTLADMVVKTAQPGDHILVMSNGGFGGIHQKLLDGLA
                     KKAEAAQ"
     gene            20959..21957
                     /gene="fbp"
                     /locus_tag="JNZ57_000630"
     CDS             20959..21957
                     /gene="fbp"
                     /locus_tag="JNZ57_000630"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HAY8826951.1"
                     /translation="MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAG
                     LVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEH
                     AKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVV
                     YGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVK
                     KYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYEC
                     NPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDVERFIREFPDA"
     gene            complement(21990..22982)
                     /gene="yjfF"
                     /locus_tag="JNZ57_000631"
     CDS             complement(21990..22982)
                     /gene="yjfF"
                     /locus_tag="JNZ57_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease YjfF"
                     /protein_id="HAY8826952.1"
                     /translation="MIKRNLPLMITIGVFVLGYFYCLTQFPGFASTRVICNILTDNAF
                     LGIIAVGMTFVILSGGIDLSVGSVIAFTGVFLAKVVGDFGLSPLLAFPLVLVMGCAFG
                     AFMGLLIDALKIPAFIITLAGMFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGG
                     HLSAMGLLMLVVVIGIFLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTG
                     LATLAGIVFSIYTQAGYALAGVGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGL
                     IQTYINFDGTLSSWWTKIAIGILLFIFIALQRGLTVLWENRQSSPVTRVNIAQR"
     gene            complement(22969..23991)
                     /locus_tag="JNZ57_000632"
     CDS             complement(22969..23991)
                     /locus_tag="JNZ57_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313234.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY8826953.1"
                     /translation="MPQSLPDTTTPKRRFRWPTGMPQLVALLLVLLVDSLVAPHFWQV
                     VLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVA
                     EVSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIVT
                     FNSPDLSWFGSGSLLFLPTAVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAG
                     VNTRIIVMLTYVLSGLCAAIAGIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMG
                     GRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGV
                     RSRDKT"
     gene            complement(24005..25507)
                     /locus_tag="JNZ57_000633"
                     /pseudo
     CDS             complement(24005..25507)
                     /locus_tag="JNZ57_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026286.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
     gene            complement(25647..26603)
                     /gene="ytfQ"
                     /locus_tag="JNZ57_000634"
     CDS             complement(25647..26603)
                     /gene="ytfQ"
                     /locus_tag="JNZ57_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactofuranose ABC transporter
                     substrate-binding protein YtfQ"
                     /protein_id="HAY8826954.1"
                     /translation="MWKRLLVVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNV
                     AKSEAEKRGITLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKD
                     AEIPVFLLDRSIDVKDKSLYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVG
                     ASVAIDRKKGFAEAIKNAPNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYA
                     HNDDMVIGAIQAIKEAGLKPGKDILTGSIDGVPDIYKAMIDGEANASVELTPNMAGPA
                     FDALEKYKKDGTMPEKLTLTKSTLYLPDTAKEELEKKKNMGY"
     gene            26913..27443
                     /gene="ppa"
                     /locus_tag="JNZ57_000635"
     CDS             26913..27443
                     /gene="ppa"
                     /locus_tag="JNZ57_000635"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001739810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HAY8826955.1"
                     /translation="MSLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDR
                     FMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGE
                     DAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAE
                     AAKAEIVASFERAKNK"
     gene            complement(27823..28164)
                     /locus_tag="JNZ57_000636"
     CDS             complement(27823..28164)
                     /locus_tag="JNZ57_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HAY8826956.1"
                     /translation="MRIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSLGHYPGA
                     VPGNGTVHGEVYRIDNATLAELDALRTRGGEYARQLIQTPYGSAWMYVYQRPVEGLKL
                     IESGDWLDRDK"
     gene            complement(28167..31946)
                     /gene="tamB"
                     /locus_tag="JNZ57_000637"
     CDS             complement(28167..31946)
                     /gene="tamB"
                     /locus_tag="JNZ57_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex protein TamB"
                     /protein_id="HAY8826957.1"
                     /translation="MSLWKKISLGVVIVILLLLGSVAFLVGTTSGLHLVFKAADRWVP
                     GLDIGKVTGGWRDLTLSDVRYEQPGVAVKAGNLHLAVGLECLWNSSVCINDLALKDIQ
                     VNIDSKKMPPSEQVEEEEDSGPLDLSTPYPITLTRVALDNVNIKIDDTTVSVMDFTSG
                     LNWQEKTLTLKPTSLKGLLIALPKVAEVAQEEVVEPKIENPQPDEKPLGETLKDLFSR
                     SVLPEMTDLHLPLNLNIEEFKGEQLRVTGDTDITVRTMLLKVSSIDGNTKLDALDIDS
                     NQGIVNASGTAQLSDNWPVDITLNSTLNVEPLKGEKVKLKVGGALREQLEIGVNLSGP
                     VDMDLRAQTRLAEAGLPLNVEVNSKQLYWPFTGEKQYQADDLKLKLTGKMTDYTLSMR
                     TAVKGQEIPPATITLDAKGNEQQVNLDKLTVAALEGKTELKALLDWQQAISWRGELTL
                     NGINTAKEFPEWPSKLNGLIKTRGSLYGGTWQMEVPELKLTGNVKQNKVNVDGTLKGN
                     SYMQWMIPGLHLELGPNSAEVKGELGVKDLNLDATINAPGLDNALPGLGGTAKGLVKV
                     RGTVEAPQLLADITARGLRWQELSVTQVRVEGDIKSTDQIAGKLDVRVEQISQPDVNI
                     NLVTLNAKGSEKQHELQLRIQGEPVSGQLNLAGSFDRKEERWKGTLSNTRFQTLVGPW
                     SLTRDIALDYRNKEQKISIGPHCWLNPNAELCVPQTIDAGAEGRAVVNLNRFDFAMLK
                     PFMPETTQASGIFTGKADVAWDTTKEGLPQGSITLSGRNVQVTQTVNDAALPVAFQTL
                     NLTAELRNNRAELGWTIRLTNNGQFDGQVLVTDPQGRRNLGGNVNIRNFNLAMINPIF
                     TRGEKAAGMVSANLRLDGDVQSPQLFGQLQVTGVDIDGNFMPFDMQPSQLAVNFNGMR
                     STLAGTVRTQQGEIYLNGDADWSQIENWRARVTAKGSKVRITVPPMVRMDVSPDVVFE
                     ATPNLFTLDGRVDVPWARIVVHDLPESAVGVSSDVVMLNDNLQPEEPKTASIPINSNL
                     IVHVGNNVRIDAFGLKARLTGDLNVVQDKQGLGLNGQINIPEGRFHAYGQDLIVRKGE
                     LLFSGPPDQPYLNIEAIRNPDATEDDVIAGVRVTGLADEPKAEIFSDPAMSQQAALSY
                     LLRGQGLESDQSDSAAMTSMLIGLGVAQSGQIVGKIGETFGVSNLALDTQGVGDSSQV
                     VVSGYVLPGLQVKYGVGIFDSIATLTLRYRLMPKLYLEAVSGVDQALDLLYQFEF"
     gene            complement(31943..33676)
                     /gene="tamA"
                     /locus_tag="JNZ57_000638"
     CDS             complement(31943..33676)
                     /gene="tamA"
                     /locus_tag="JNZ57_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex protein TamA"
                     /protein_id="HAY8826958.1"
                     /translation="MRYIRQLCCVSLLCLSGSAVAANVRLQVEGLSGQLEKNVRAQLS
                     TIESDEVTPDRRFRARVDDAIREGLKALGYYQPTIEFDLRPPPKKGRQVLIAKVTPGV
                     PVLIGGTDVVLRGGARTDKDYLKLLDTRPAIGTVLNQGDYENFKKSLTSIALRKGYFD
                     SEFTKAQLGIALGLHKAFWDIDYNSGERYRFGHVTFEGSQIRDEYLQNLVPFKEGDEY
                     ESKDLAELNRRLSATGWFNSVVVAPQFDKARETKVLPLTGVVSPRTENTIETGVGYST
                     DVGPRVKATWKKPWMNSYGHSLTTSTSISAPEQTLDFSYKMPLLKNPLEQYYLVQGGF
                     KRTDLNDTESDSTTLVASRYWDLSSGWQRAINLRWSLDHFTQGEITNTTMLFYPGVMI
                     SRTRSRGGLMPTWGDSQRYSIDYSNTAWGSDVDFSVFQAQNVWIRTLYDRHRFVTRGT
                     LGWIETGDFDKVPPDLRFFAGGDRSIRGYKYKSIAPKYANGDLKGASKLITGSLEYQY
                     NVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRWESPVGPIKLDFAVPVADKDEHG
                     LQFYIGLGPEL"
     gene            33882..34520
                     /gene="msrA"
                     /locus_tag="JNZ57_000639"
     CDS             33882..34520
                     /gene="msrA"
                     /locus_tag="JNZ57_000639"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HAY8826959.1"
                     /translation="MSLFDKKHLVSPADALPGRNTPMPVATLHAVNGHSMTNVPDGME
                     IAIFAMGCFWGVESLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD
                     PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAA
                     MLAADDDRHITTEIANATPFYYAEDDHQQYLHKNPYGYCGIGGIGVCLPPEA"
     gene            34843..36186
                     /locus_tag="JNZ57_000640"
     CDS             34843..36186
                     /locus_tag="JNZ57_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HAY8826960.1"
                     /translation="MLNSILVILCLIAVSAFFSMSEISLAASRKIKLKLLADEGNINA
                     QRVLNMQENPGMFFTVVQIGLNAVAILGGIVGDAAFSPAFHSLFSRYMSAELSEQLSF
                     ILSFSLVTGMFILFADLTPKRIGMIAPEAVALRIINPMRFCLYVCTPLVWFFNGLANM
                     IFRIFKLPMVRKDDITSDDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTP
                     RENVIWFDLHEDEQSLKNKVAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLA
                     LNSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMG
                     DLVGQGLEEQIVARDENSWLIDGGTPIDDVMRVLDIDEFPQSGNYETIGGFMMFMLRK
                     IPKRTDSVKFAGYKFEVVDIDNYRIDQLLVTRIDSKATALSPKLPDAKDKEESVA"
     gene            complement(36248..36454)
                     /locus_tag="JNZ57_000641"
     CDS             complement(36248..36454)
                     /locus_tag="JNZ57_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1107 domain-containing protein"
                     /protein_id="HAY8826961.1"
                     /translation="MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKV
                     KDKLHLSVMSEVNRQVMRLQTEMA"
     gene            36779..37333
                     /locus_tag="JNZ57_000642"
     CDS             36779..37333
                     /locus_tag="JNZ57_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtfJ family protein"
                     /protein_id="HAY8826962.1"
                     /translation="MTLRKILALTCLLLPMMASAHQFETGQRVPPIGITDRGELVLDK
                     DQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNT
                     DDAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVARGAWQLDEESSAVVVLDKDGRVQ
                     WAKDGALTQEEVQQVMDLLQKLLK"
     gene            complement(37423..>37721)
                     /locus_tag="JNZ57_000643"
     CDS             complement(37423..>37721)
                     /locus_tag="JNZ57_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8826963.1"
                     /translation="IDDNFAIVIESLGFALKIYGGDERFRNGSSVVLEDEDYSLIYNF
                     LVNAGCQQVELAEQVDAIVSANLAVDSDITEEEICEKYKSTIEAFKKEQLALPV"
BASE COUNT         9215 a        10059 c         9288 g         9159 t
ORIGIN      
        1 atttttatag ggttctttat cgagattgaa aaataaggtc tcagctattt taattttaga
       61 ttgatcgcag ctaaaatctt tagattgatc gcggctaaaa tcaatatgat ttatcacgga
      121 gcatgcatac tttatctttt cagaatcacc aaaatattgc attcttttat taaaacacca
      181 atccagtatt cttacatcat taatatatgg gaattttaaa aaagtctcca gaatcgatga
      241 ccggtgtaag gttaactttt gcatcatcta aggaatcaat aagaatatga gacaggttaa
      301 ctttgatgtc attaatttca ttgtcagtag ctttcttatt attaagaaga taattattta
      361 ctgcgttaag gtcatctatt tctttcagta tccctttttc accaagcaag tatgaaatcg
      421 attcattaca tacataaggc attaatagca gatgttcttt ccttattgct aataatgcat
      481 tattcaatgg tttttctaat aaatccgtaa tcgtagaatc aactgaatct ttacaactca
      541 cctgcgagtt attcaagtcc tgagaattat taaactcctg cgaaatattt aatagacgag
      601 ctatttcctt gttagcttcg cgttggtaac atgccagaat cttgttagta atcaggtgta
      661 atgaactctc atcttttctt tcaaaggact ttccttcata acgattagtc gaaccatcag
      721 gttgttgaaa tataatagcc gtatgtcctt gacgagtccc catagtagtg aaagtggaaa
      781 gtgtgatttc tatttccacc ttagataaat ccgctcgttc cccttcagga ttattcataa
      841 caaactttat tatctcactg ccatcattat ttttgatata agatgaggac tcaatatgag
      901 ccatcatatt tcttcccgct tcgttggagc gtttgctaaa atccacataa cctagagtaa
      961 atatttttac caaaaattcc aaaaatgtct taggatcaag gatatttctt gtgttatcct
     1021 gcccctcggc attacgggca aaattattca ttccaacacg ccaggtattt aaaacttcac
     1081 ttttttgttt aaaattgtcg gctaatgtaa tgtgttgaga ataattcaaa tctgatattt
     1141 tgctcatgac gaactccttg agttaataag aacgtctaag cattacaaat tttactcaca
     1201 aaaaaatatc aaaaaacgct cttttcacaa actcgccgta aacctggagt tatttacggc
     1261 gaaaagtcat cacgccatca gcatcttcac tactgctttg cgaacccggg ctggcgcgcc
     1321 cactgcgcac agcggtttat gcacttcccc cggataaaac acaacaaaat caccttcatt
     1381 aaggataact gttttctcat caacgccttc cggcaaaaat gcgatgtctt tatcagctaa
     1441 ccagtcggta tccggggtgc ctgcaggttg cgtactgaag gtcatgcctt cctgaccttt
     1501 taacacaatc tgaatgtcga gatagcgggc atggtactcc gcacggcgag cttcgtgcgg
     1561 ctcggtcata tcttccgaga taagataaaa cagacgattg ccttcgatat cgtgcttgcc
     1621 ctttggcgtt tctgccgtaa cgtgtgcttt gatatgctca atcgcctggc gtaactcctg
     1681 gggtagccac ggctgaagat tatgaatatt tccgatgatc atcttttcca ctccttaatt
     1741 aaaacaacgt ttcatttcca tcgttatacg aaaagatgat caattccgct agccttaacg
     1801 cgtgaattat tgtcttatca caacttatcg gcaggcgcgt tcccgccttt cgggtcaagg
     1861 cccgcatcac tccttgagaa tagtttttat cgcttccccc gccagtgcag ctgttgcaca
     1921 gagttgttcg atggagtgcc cctcccgtgc cttcgcagaa agccctgaca tcacggtact
     1981 cataaaatca gtcacacatt gtgcgctttg tggatgccgc ctggcgatat agtcataaat
     2041 ggtcgtttct gcggcgtgat aatattgaac ggcaatatca cgcgcttgtg gatcatgact
     2101 atgaatgcct tcaagaacca tacagccagc gcagccgccg ttttggctat atctgcgcgc
     2161 cgcttctttt aatacctcag ccaggcactc ccctaccgga cgatcatcac gaagaatatc
     2221 ggcaagcgga atagcttccg taccgacata ttcattgagt acacggctaa ataacccagc
     2281 cttattgcca aaagccgcgt agaggctcgg ggggttaata ccaagataat cagtaacttc
     2341 agcaacactg acagcatcga aacctttttg gtgaaaaagc acttttgccg cagagactgc
     2401 ctgctcagga gcgaaacgtc tgggacgacc tggaacgcga gattgttttt tagtgaccat
     2461 tacaaaacct gttgacagaa agttaaaaca gttttgtaat gcatgttaca taataaatca
     2521 aggagtcctt atgggcgctt ttacaggtaa gacagttctc atcctcggtg gtagccgtgg
     2581 aatcggtgcc gctatcgtac gtcgtttcgt caccgatggg gccaatgtac gattcaccta
     2641 tgcggggtcg aaagatgccg ctgaacgcct ggcacaagag actggagcga cagcagtatt
     2701 cacagatagt gctgacaaag acgctgttat tgatgtcgtt cgtaagagcg gcgcattgga
     2761 tatcctggtg gtaaatgcag gtattggcgt ctttggcgat gccctggaat taaatgccga
     2821 cgatattgat cgccttttca aaatcaatat tcatgctcct taccatgcct ctgttgaagc
     2881 cgtccggcag atgcccgaag gcggacgcat cttaatcatc ggctccgtga atggcgatcg
     2941 tatgcctgtt gcaggcatgg ctgcttatgc cgccagtaaa tctgccctgc aaggcatggc
     3001 gcgcgggctg gcccgtgatt tcggaccgcg tgggatcacc atcaacgtcg tccagccagg
     3061 gccaattgat accgacgcta atcccgccaa cgggccaatg cgcgatatgt cgcatagttt
     3121 tatggccatc aaaagacatg ggcaaccgga agaggtcgct ggtatggtcg catggttagc
     3181 agggccagaa gccagttttg ttaccgacgc gatgcatacc attgatggcg cgtttggcgc
     3241 ataaccgact acgctcaatt aagcccagcc atttcccatg atgtctgggt tttgtttact
     3301 cacgtcgtcc gctaaaagcg gctcctggta aatataaatc ttctgttcat gtcgtaaatc
     3361 ttgaggataa ccaaatggta gaaagaaccg ctgttttccc tgctggacga cattcactgt
     3421 atgctgagca tcgttattct gcggctattc gttccggcga tttgctgttt gtttccgggc
     3481 aagtaggaag tcgagaggac ggaacaccag aacccgattt tcagcaacaa gtcagactgg
     3541 cctttgataa tttgcatgcg accctggcag ctgcgggatg cacttttgac gatatcattg
     3601 atgttacgag ctttcatacc gatccagaaa aacaatttga agacatcatg acggtgaaaa
     3661 atgaaatatt tagcgcgcca ccttatccaa cctggacggc ggtgggcgtt acatggctgg
     3721 caggctttga ttttgaaatt aaagtgatag cgcgcatccc tgagctctaa gcaatagtgc
     3781 tagccgttcg ttttcacact ccgccctata agtcggatga atggaataaa atgcatatct
     3841 gattgcgtga aagtgaaaaa gaaaaaagca ggaaatgtct gcaattattg ataccgagcg
     3901 acagttcccc ccagaatcac agtaaataaa aatgcatata ttttaacttt aaattcaaat
     3961 aaaccgtttg cgctgacaaa atattgcatc aattgcttgc accgcttctg acgatgagta
     4021 taatgccgga caatttgccg ggaggatgta tggttcagtg tgttcgacat tttgtcttac
     4081 cgcgtctgaa aaaagacgct ggcctgccgt ttttcttccc gttgatcacc cattcccagc
     4141 ccctcaatcg aggggctttt ttttgcccag gcgtcaggag ataaaagatg gctaatccgc
     4201 tatatcagaa acatatcatt tccataaacg accttagtcg cgatgacctt aatctggtgc
     4261 tggcaacagc ggcaaaactg aaagcaaacc cgcaaccaga gctgttgaag cacaaagtca
     4321 ttgccagctg cttcttcgaa gcctctaccc gtacccgcct ctctttcgaa acttccatgc
     4381 accgcctggg tgccagcgtg gtgggcttct ccgacagcgc caatacatca ctgggtaaaa
     4441 agggcgaaac gctggccgat accatttcgg ttatcagcac ttacgtcgat gcgatagtga
     4501 tgcgtcatcc gcaggaaggt gcggcgcgcc tggccaccga gttttccggc aatgtaccgg
     4561 tactgaatgc cggtgatggc tccaaccaac atccgacgca aaccttgctg gacttattca
     4621 ctattcagga aacccagggg cgtctggaca atctccacgt cgcaatggtt ggtgacctga
     4681 aatatggccg caccgttcac tccctgactc aggcgttagc gaagttcgac ggcaaccgtt
     4741 tttacttcat cgcgccggac gcgctggcaa tgccgcaata cattctggat atgctcgatg
     4801 aaaaagggat cgcatggagt ctgcacagct ctattgaaga agtgatggcg gaagtagaca
     4861 tcctgtatat gacccgcgtg caaaaagagc gcctggaccc atccgaatac gccaacgtga
     4921 aagcgcagtt tgttcttcgc gccagcgatc tccacaacgc caaagccaat atgaaagtac
     4981 tgcatccgct gccgcgtgtt gatgaaattg cgacggatgt tgataaaacg ccacacgcct
     5041 ggtacttcca gcaggcaggc aacgggattt tcgctcgcca ggcgttactg gcactggttc
     5101 tgaatcgcga tctggtactg taaggggaaa tagagatgac acacgataat aaattgcagg
     5161 ttgaagctat taaacgcggc acggtaattg accatatccc cgcccagatc ggttttaagc
     5221 tgttgagtct gttcaagctg accgaaacgg atcagcgcat caccattggt ctgaacctgc
     5281 cttctggcga gatgggccgc aaagatctga tcaaaatcga aaataccttt ttgagtgaag
     5341 atcaggtaga tcaactggca ttgtatgcgc cgcaagccac ggttaaccgt atcgacaact
     5401 atgaagtggt gggtaaatcg cgccccagtc tgccagagcg catcgacaat gtgttggtct
     5461 gcccgaacag caactgtatc agccatgccg aaccggtttc atccagcttt gccgtgcgaa
     5521 aacgcgccaa tgacatcgcg ctcaaatgca aatactgtga aaaagagttt tcccataatg
     5581 tggtgctggc caattaattg cggttggtaa taaaagtctg gctccctata atgagccaga
     5641 ctttttaccg ctgtaataaa ggagaaatca tgagcaaaac tatcgcgacg gaaaatgcac
     5701 cagcagctat cggtccttac gtacagggcg ttgatctggg aaatatgatc atcacctccg
     5761 gtcagatccc ggtaaatccg aaaacgggcg aagtaccggc agacgtcgct gcacaggcac
     5821 gtcagtcgtt ggataacgta aaagcgatcg tcgaagccgc tggtctgaaa gtgggcgaca
     5881 tcgttaaaac taccgtgttt gtaaaagatc tgaacgactt cgcaaccgta aacgccactt
     5941 acgaagcctt cttcaccgaa cacaacgcca ccttcccggc acgttcttgc gttgaagttg
     6001 cccgtctgcc gaaagacgta aagattgaga tcgaagcgat cgctattcgt cgctaatctt
     6061 gatggaaatc cgggctatca tgcccggatt aagtctgatg acaaacgcaa aatcgcctga
     6121 tgcgctacgc ttatcaggcc tacgtgattc ctgcaattga ttgaatttgt aggccggatt
     6181 aggcgtttac gccgcatccg gcatgaacaa aactcacttt gtctgcaatc tgaatccggg
     6241 ccaccatgcc cagtttattc tttactgcca gccgtaacga cggctataaa atcctttcac
     6301 caactgggtt aacgtcatat accctgccag aatcgcaacc agccacggga aatagcttaa
     6361 cggcaacgcc tgtaattgca gataactggc cagcggtgaa aacggcaatg cgatcccgac
     6421 aatcatcacg atcacggtca tgatcattaa cggccacgat gcacagctct gaataaacgg
     6481 cacacggcgg gtgcggatca tatgcacaat cagcgtttgc gacagtaagc ccaccacaaa
     6541 ccatcccgac tggaacagcg tttgcgtttc cggcgtgttg gcatggaata cccaccacat
     6601 caggcaaaac gtcagaatat cgaagatcga gctgatcggt ccgaagaaga tcataaagcg
     6661 ccccagatcc gccggattcc aacgctgcgg cttttgaatt tgctcgtcgt cgacgttatc
     6721 aaacgggatc gccacctgtg acacatcgta cagcaggttc tgaataagca agtgtaacgg
     6781 caacatcggc aggaagggca agaaagcact cgccaccagc acgctgaaca cattaccaaa
     6841 gttagaactc gccgtcattt tgatgtattt cagcatgttg gcgaaagtgc gacgtccctc
     6901 aataaccccc tcttccagca ccatcaggct tttttccagc aggatgatat cagccgcttc
     6961 acgggcaata tctaccgcgc cgtccacaga aatgccgata tccgccgcgc gtaaggcggg
     7021 cgcatcatta ataccatcgc ccataaagcc aaccacatgc ccttcgcgct tcagtaaggt
     7081 cacaatgcgt tctttatgca tcggcgtcag gcgggcaaac agcgtggtgc gctgtgcaag
     7141 atttgccagt tcgtcgtcag atagcgtttc aatatcacta ccaatgacca cctctcccgc
     7201 gtccagcccc acttcatggc acactttcgc tgcaactaac tcactgtcgc cagtaaggat
     7261 ttttacggta attccactcg cttttaatgc cttcagtgcc ggagcggttg tctcttttgg
     7321 cggatcaaga aaagcaatat atccttcgag gatcaggtcg gattcatccg cccgctggta
     7381 atctccttca cgcgctggca ggtatttcgt cgccaccgca accacgcgca gcccctgacg
     7441 attcagcgta tcagtaaccc gcttaatctt acgcagcatg atgtcatcga gcggcacaat
     7501 ctcgccattg tgacgcacct gcgaacacac attgaggatt tcctgcaatg cacctttgca
     7561 aaccagctga tggtgctcgg tattttctgc cactaccacc gacatccggc gacgctcgaa
     7621 atcaaacgga atctcatcga ttttttgcca acgactggcc agcgagcgcg ctgactcttc
     7681 atccgtacct tcgagcaccg ctgtatcgag caggttttta agtccggtct gataatgact
     7741 gttcaaccac gcgctatgca gcacgcgttc gctggtttta ccggagatat cggtatgatt
     7801 ctccagcaca attttatcct gcgtcagggt gccggtttta tcagtgcaca gaatatccat
     7861 tgcgccaaag ttctgaatag catccagatg tttgacgatc actttctgtt tcgacagctt
     7921 tactgcgccg cgcgccagcg tcgaggtaac aatcatcggc aacatttccg gcgttaggcc
     7981 taccgcgacc gaaagcgcaa acagcgccgc ttcccaccag tcgcctttgg tgtagccatt
     8041 gattaacagc accaccggtg ccatcaccag cataaagcga atcagcagca tactgacgcg
     8101 gctgatccct tgctgaaagg cattcggctc gctttcctgc tcactaacac gccccgccag
     8161 ttgaccaaac caggtattgg cacctgtagc aatcaccatt gcttgtgccg tgccgctcac
     8221 cacggtggtg cccataaaac acagcgtgtc gcactccagc ggattgctgt gctccggctg
     8281 gcgagtggta gcggcttttt ccacgggcag agactcaccg gttaacgacg cctgagcgac
     8341 gaacagatcc cgcgcttgca agatacgtaa atctgccggg atcatatccc ccgccgccag
     8401 ttttataata tcgccgggca ccagctggtc gatcgggatc tccagccagc cattttcgcc
     8461 tttgtcgtta attacgcgca gcaccgtcgc ggtattgctg accatcgctt tcagggcatc
     8521 tgccgcttta gtggaacgtg cttcctgaat aaagttcagc aacgtagaaa tagcgaccat
     8581 tagcgcgata acgcccgcag caaataaatc ttccgtggcg taagaaatag cgccgagaat
     8641 ggtgagtaaa atattaaagg ggttgcgata gcagacccat aaatgtaccc accacggcga
     8701 cagttgttgt gcgggtaatt tattttcacc atgttgttcg cgggcagatt ccacttccgc
     8761 ctgatttaac ccttccggat gggtgtcgaa cgttttccac aattcttctt cgggcatcac
     8821 cgccattttc aggcaatgcg cacttaagga cggcgggacc accgtattca ctgtctgctg
     8881 cgcgccaggc aatggatcac gatgaaccag acgggaaggt aaatggcgaa tgagccgggt
     8941 aaaaatttct ttaaacataa ggagtccctc cgcactgtct gaaacagtac agaaatgtct
     9001 tcaggcgtgg cgaagcctta cctgaaggta ataaagctga gcagggacgt taaaacgtca
     9061 cggccttacg catccggtaa cgccgtgaaa agacgggctt accggaaaag ttttaatctc
     9121 tgtcgaggga gaggcgtggg atcaggttcc atataacctc cggtaagtga aaaaagcgcc
     9181 gcaaataata aggagaatac aataatattc gtagcatcta tggcgatata atacctgctg
     9241 gcaactaaac caacgataaa ccagacttta cccattgctg aatgcacggg taaagttagg
     9301 ctcaaataat taaacaacac gttacaggac aacaggatgc aaaatcggct gaccatcaaa
     9361 gacatcgcgc gcttaagcgg cgtggggaaa tctacagttt cccgggtgct gaataacgaa
     9421 agcggcgtga gccagcgcac ccgcgagcgt gttgaagcag tgatgaatca gcatggattt
     9481 tccccttccc gctctgcgcg cgctatgcgt gggcaaagcg ataaagtggt cgccatcatt
     9541 gttacccgcc tggattcgtt gtcagaaaat ctcgccgttc aaaccatgct gccagagttc
     9601 tatgaacaag gttacgaccc aatcatgatg gaaagtcagt tttccccgca attagttgcc
     9661 gaacatttgg gggtgctgaa acggcgtaat atcgacggcg tagtgctgtt cggttttacc
     9721 ggcataacag aagaaatgtt agcccactgg cagtcatcgc tggttctgct ggcgcgtgac
     9781 gcaaaaggct ttgcttcggt ctgttatgac gacgaagggg caatcaagat cctgatgcaa
     9841 cggctgtatg accaggggca tcgtaatatc agttatctcg gcgtgccgca cagtgacgtg
     9901 acgaccggta agcgacgtca cgaagcctac ctggcgttct gcaaagcgca taaactgcat
     9961 cccgttgccg ctctgccagg ccttgctatg aagcaaggct atgagaacgt agcaaaagtg
    10021 attacgcctg aaactaccgc cttactgtgc gcaaccgaca cgctggcact tggcgcaagt
    10081 aaatacctgc aagagcaacg catcgacacc ttgcaactgg cgagcgtcgg taatacgccg
    10141 ttaataaaat tcctccatcc ggagatcgtc accgtagatc ccggttacgc cgaagctgga
    10201 cgccaggcgg cctgccagtt gatcgcacag gtaaccgggc gcagcgaacc gcaacaaatc
    10261 atcatccccg ccaccctgtc cagatcgttt cctgaacgat aaattgtgat cttcgctgtg
    10321 tttcgggaac gttccctttt ttaaattttt ccgcgcaata tattctgcag ccaaccaaaa
    10381 atgtcatctg ccatggggct ttatgatgag caaaataaac caaacggata tcgatcggtt
    10441 gattgaactg gtcggcgggc gcggcaatat tgcgacggtg agccactgta ttactcgcct
    10501 acgctttgtc ctcaaccaac cggccaatgc cagaccgaaa gaaattgagc aactccccat
    10561 ggtgaaaggc tgtttcacca atgccgggca atttcaggtg gtgattggca ccaacgtggg
    10621 tgactactat caagcactga tagcgtcaac cggacaggcg caggttgata aagagcaggt
    10681 aaaaaaagcc gcccggcaga atatgaaatg gcatgagcag ttgatctctc atttcgcaga
    10741 gaccttcttc ccgttgctgc ccgcgttgat tagcggcggt ttgatcctcg gttttcgcaa
    10801 tgtgatcggc gatttgccca tgagcaacgg tcaaacgctg gcgcaaatgt acccttccct
    10861 gcaaacgatc tacgattttc tgtggttgat cggtgaagcg atcttcttct acctgccggt
    10921 cgggatttgc tggtcagcgg tgaaaaaaat gggcggcaca ccgatccttg gtatcgtgct
    10981 tggcgtgaca ctggtttccc cccaactgat gaacgcttat ctgctcgggc agcagctgcc
    11041 ggaagtgtgg gactttggca tgttcagcat cgccaaagtg ggctatcagg cgcaggtgat
    11101 cccggcactg ttagccgggc tggcgctggg cgttattgaa actcgcctta aacgcatcgt
    11161 gccagattac ctctatctgg tggtggtgcc cgtctgttcg ctgatcctcg cggtgttcct
    11221 cgcccatgcg ctgattggtc cgtttggtcg catgattggc gatggcgttg cctttgcggt
    11281 acatcacctg atgaccggca gctttgctcc gattggcgcg gcattgtttg gcttcctgta
    11341 cgccccgctg gtgatcaccg gggtacacca gaccacgctt gctattgatt tgcagatgat
    11401 tcaaagcatg ggtggtacgc cagtgtggcc actgattgcg ctgtcgaata tcgctcaggg
    11461 ctccgccgtg atcggcatta tcatttccag ccgcaagcac aatgaacgcg agatctccgt
    11521 gcctgcggcg atctccgcct ggcttggggt cactgagcct gcaatgtacg gcatcaacct
    11581 gaaatatcgc ttcccgatgc tgtgcgcgat gattggttct ggtctggcag gattgctatg
    11641 cggcctgaac ggcgttatgg cgaatggcat cggcgtaggc ggcctgccgg gaattctctc
    11701 gattcaaccg aactactggc aggtgtttgc gctggcaatg gctatcgcca tcatcatccc
    11761 gattgtactc acctcgttta tctatcagcg gaaataccgc ctgggcacgc tggacattgt
    11821 ttaattttct tcggggcgca attgcgcccc ctcgcatttg caggaataac gtaatgacta
    11881 atcctcccca ctggtggcaa aacggcgtta tctaccagat ttatccaaag agttttcagg
    11941 acaccacggg tagcggtacc ggcgatttac gtggcgttat ccaacgcctg gactatctgc
    12001 ataaactggg cgttgatgcc atctggctaa ccccctttta tgtctctccc caggtcgata
    12061 acggttacga cgtagcgaac tatacggcga ttgatcccac ctacggcacg ctggacgatt
    12121 ttgacgaact ggtgacgcag gcaaaatcgc gcgggattcg tatcattctc gatatggtgt
    12181 ttaaccatac ctctacccaa catgcctggt ttcgcgaggc gctgaacaaa gaaagccctt
    12241 accgccagtt ttatatctgg cgcgatggag aaccagaaac gccaccgaac aactggcgtt
    12301 caaaatttgg cggtagtgcg tggcgctggc atgcggaaag cgaacagtac tatttgcatc
    12361 tctttgcacc agaacaggcg gatctcaact gggagaatcc agcggtacgc gcagtgctga
    12421 aaaaagtctg tgagttctgg gccgatcgtg gggtcgacgg gttgcgcctg gatgtggtga
    12481 atctgatctc caaagacccg cgtttccctg atgacctgga tggcgacggg cgtcgcttct
    12541 acaccgacgg gccacgagca cacgagtttt tgcacgagat gaaccgcgat gtgtttacgc
    12601 cacgcgggtt aatgaccgta ggtgaaatgt cctccaccag ccttgagcat tgccagcgat
    12661 acgcggcact gacaggcagt gaattgtcga tgacctttaa ttttcatcac ctgaaggtcg
    12721 attatcccgg tggtgaaaaa tggacgctgg ctaaacctga ctttgtggcg ttgaaaacat
    12781 tgttccgcca ctggcaacaa ggaatgcaca acgtagcatg gaatgccttg ttctggtgta
    12841 accacgatca gccgcgcatt gtttctcgct ttggtgatga aggtgaatac cgcgtgcctg
    12901 cggcaaaaat gctggcgatg gtgctgcatg gcatgcaggg aacgccgtat atctaccagg
    12961 gcgaagagat tggcatgacc aacccgcatt tcacgcgcat tactgactat cgcgacgtag
    13021 agagcctcaa tatgtttgcc gagctgcgca acgatggtcg tgatgccgac gagttattgg
    13081 caatccttgc cagtaaatcc cgtgacaaca gccgcacgcc catgcaatgg agcaacggcg
    13141 ataatgccgg atttacggct ggcgaaccgt ggattggcct aggtgataac tatcaacaaa
    13201 tcaacgtaga agccgcgctg gccgatgatt cctcggtgtt ttacacctac caaaagttaa
    13261 tcgcactgcg taagcaggaa gccatcctga catggggcaa ttaccaggat ctgctgccaa
    13321 acagccctgt attgtggtgc tatcgccgtg aatggaaggg gcaaaccttg ctggtcattg
    13381 ccaaccttag ccgtgagatc caaccctggc agccagggca aatgcgcggc aactggcagc
    13441 ttgtgatgca taactacgaa gaagcctcac cacaaccctg tgccatgaat ttacggcctt
    13501 ttgaggctgt ctggtggtta cagaagtaaa tcttccctaa gccccggtaa tgccggtcat
    13561 tccggggttt tgtctgtcag catgttgttt ttgtttattt ttcaaccagc aaattcatta
    13621 aaaaatttac ataacgctgt agcgcccgtc atccgtacgc tctgcttttt actttgagct
    13681 acatcaaaaa aagttcaaac atccttgatg caaagcacta tatatagact ttaaaattcg
    13741 tcccaaccca atatgttgta ttaatcgact ataattgcta ctacagctcc ccacgaaaaa
    13801 ggtgcggcgt tgtggaaaag cggatggcga ttgcggaaag caccggaaaa cgaaacgaaa
    13861 aaaccggaaa acgcctttcc caatttctgt ggataacctg ttcttaaaaa tatggagcga
    13921 tcatgacacc gcatgtgatg aaacgagacg gctgcaaagt gccgtttaaa tcagagcgca
    13981 tcaaagaagc gattctgcgt gcagctaaag cagcggaagt cgatgatgcc gattattgcg
    14041 ccactgttgc tgcagttgtc agcgagcaga tgcagggccg caaccaggtg gatatcaatg
    14101 agatccagac cgctgttgaa aaccagctga tgtcaggtcc atacaaacaa ctggctcgtg
    14161 cttacatcga gtaccgtcac gatcgcgaca ttgaacgtga aaaacgcggt cgcctgaatc
    14221 aggagatccg tggtctggtc gagcagacca acgcctcgtt actcaacgaa aacgccaaca
    14281 aagacagcaa ggtgattcca acccagcgcg acctgctggc cgggatcgtg gctaaacact
    14341 atgcacgtca gcacctgctg ccgcgtgacg tggtgcaggc acatgagcgt ggcgatattc
    14401 actatcacga tctcgattac tcgccgttct tcccgatgtt caactgcatg ttgatcgacc
    14461 tgaaaggcat gctgacccag ggctttaaga tggggaacgc cgagattgaa ccgccgaagt
    14521 cgatctctac ggcaaccgct gtaactgcgc agattattgc tcaggtcgcc agccatattt
    14581 atggcggcac caccattaac cgtatcgatg aagtgctggc accgtttgtc accgccagct
    14641 acaacaaaca tcgcaagacc gcagaagagt ggaacatccc ggacgccgaa ggctacgcta
    14701 actctcgtac cattaaagag tgctacgatg ccttccagtc gctggagtac gaagtaaaca
    14761 ccctgcacac cgccaacggt cagacgccgt ttgtaacctt tggttttggt ctgggcacca
    14821 gctgggagtc gcgcctgatt caggaatcta tcctgcgtaa ccgtatcgca ggcctcggta
    14881 aaaaccgtaa aactgcggtg ttcccgaaac tggtgtttgt gattcgcgat ggcctgaacc
    14941 ataaaaaagg cgatccgaac tacgacatca aacagctggc gctggagtgc gcaagcaagc
    15001 gcatgtatcc ggatatcctg aactacgatc aggtagtgaa agtcaccggt tcgtttaaaa
    15061 ctccgatggg ctgccgcagc ttcctcggcg tgtgggaaaa tgaaaacggc gagcagatcc
    15121 acgatggtcg taacaacctc ggcgtgatca gcctgaacct gccgcgtatt gctctggaag
    15181 caaaaggcga tgaagccacc ttctggaagc tgctggatga acgtctggtg ctggcacgta
    15241 aggcgctgat gacccgtatc gctcgtctcg aaggcgtgaa agcgcgcgtg gccccgatcc
    15301 tctatatgga aggtgcttgt ggcgtgcgtc tcaatgctga cgatgatgtt tctgaaatct
    15361 tcaaaaacgg tcgtgcgtct ctttcgctgg gttacatcgg catccacgaa accattaacg
    15421 cgctgttcgg cggcgagcat gtttacgaca acgagcagct tcgcgcgaaa ggtatcgcca
    15481 ttgttgaacg tctgcgtcag gcagtggatc agtggaagga agaaacgggt tatggtttca
    15541 gtctctacag cacgccgagt gaaaacctgt gcgaccgctt ctgccgtctc gatactgctg
    15601 agtttggcgt ggtgccgggc gtgaccgata aaggttacta caccaacagt ttccacctcg
    15661 atgtggagaa gaaggtgaac ccgtacgaca agatcgactt tgaagcgcct tacccgccgc
    15721 tggcgaacgg tggtttcatt tgctacggcg agtatccaaa cattcagcac aacctgaagg
    15781 cgctggaaga tgtctgggat tacagctatc agcatgtacc gtattacggc accaatacac
    15841 cgattgatga gtgctacgag tgtggcttta ccggtgagtt cgagtgcacc agcaaaggct
    15901 tcacctgccc gaaatgtggt aaccatgacg cctcccgtgt gtcggtaact cgccgcgtgt
    15961 gcggatattt aggtagcccg gatgcacgtc cgtttaacgc cggcaagcag gaagaagtta
    16021 agcgccgcgt taaacatttg ggaaatgggc agataggttg atctgcacta agcaaatgcc
    16081 ggatgtgatg tgaaagcgtc gcatcccgcg ttgattgccg gatgcggcgt aaacgcctta
    16141 tccggcctac atttggcaac ggctgtaggc ctgataagac gcgacagcgt cgcatcaggc
    16201 attgattacc ggatgcagtc tacacgcgga ctgataagcc aggcgaaata atgaattatc
    16261 atcagtacta tcctgtcgac atcgtcaacg gccccggcac tcgttgcacc ctgtttgtct
    16321 ccgggtgtgt tcatgaatgc cccggttgct ataacaaaag cacatggcgg gtaaattccg
    16381 gtcagccatt tactaaagca atggaagacc agatcattaa cgatctgaat gacactcgta
    16441 tcaaacgcca gggtatttcc ctctccggcg gcgatccgct gcatccgcaa aacgtgccgg
    16501 atattctgaa actggtacaa cgcatccgcg ccgagtgtcc gggtaaagac atctgggtgt
    16561 ggacaggcta taaactcgac gaactcaacg cagcgcaaat gcaggttgtt gatttgatta
    16621 acgtgctggt cgacggcaaa tttgtgcagg atttaaaaga cccttccctg atctggcgcg
    16681 gcagcagcaa tcaggtggtg catcatttgc gatgataagt tccctgttac ctgagtgcag
    16741 gcaacaggga aatgaggaat taacgatact tctggtgata ggcgttgcgg gtcgttttca
    16801 gttgctctgc ggcagcctgc gcttctttta ctttaccttc atttgccagc ttcagcgcgt
    16861 cgtcaatctg accgaccaga atatcgaaac cgtgacggaa gtctttcatc tccgggctgt
    16921 ccggtgattt gccttcgagc ttcggcggcg ttgctttttg cgcatccagc gctgcggcgc
    16981 gcatcttcgt taacgcgtct ttgacttgcg ccgcgttatc ggctttttcg accactttta
    17041 aattgtcgtt gagggtttcc atattgtctt caagatcagc ggcaaacgac gccgaactga
    17101 ataccaacga ggagactgca agaatagcta acaggctttt tcgcattgct cacatccttt
    17161 tttatttaca cttcatcatt cacactgcct catcgacgac tacgctcatt cgaccgggtc
    17221 acgtactgcg agtacgctcc ccggccctca ttcactttcc gtatcgatgc agtgcgaatg
    17281 attttgtgta attttttagt ttatagcgcg acaggtcgcg ccagtttttt tactgtccgg
    17341 cgattttcat ctccggcaac agcacagaac cacactgtat attactgcgt gtttcaatat
    17401 cgttaccgac ggtgacaata ttgcgccaca tatcttttaa attacctgcg atggtgattt
    17461 cgctaaccgg atactgaatt tcgccgtttt ctacccagaa gcccgccgca ccacgggaat
    17521 aatcaccggt aattgcactc acgccctggc ccatcaattc cgtcaccacc agcccggtgc
    17581 ccatctcttt gagcatctgc tcgaagctta gaccttgtcc ggcaatccgc cagttgtgaa
    17641 taccgcccgc atgtccggtg cttttcagcc ccagttttcg cgccgaatag ctggtcagca
    17701 gccactgagt caggatgcca tctttaataa tatcgcgacg ctcggtgcgc acaccttcgc
    17761 tgtcgaatgg cgtcgacgcc agccctttca gcagatgcgg atgctcttca atggtcagcc
    17821 agtccggcag aatttgttta cccagcgaat ccagcaggaa ggtagattta cggtaaaccg
    17881 atccacccgc tatcgccccc accagatggc caaaaagccc ggttgccact tcattggcaa
    17941 aaatgaccgg cgctttcatg gtggagagtt tacgcggtga caggcgcgat aaagtacggc
    18001 gagcacagtc ggccccaacc cactctggcg tttgcagatc gctcatcgca cgaccaatgg
    18061 tgtaggcgta atcacgctcc atatcgccat tttcttcggc aattacacag ctggagagcg
    18121 aatgacgcgt tgagcagtaa ccctgcaaca tgccgtggct gttgccaaaa actttaacac
    18181 cgtagtggct gttaaagctg ccaccttcgg tattggtgat gcgtttgtcc gcctgcaatg
    18241 ccgcctgttc tgcgcgggcc gccagttcaa tggcttcatc cggggaaact tccgcagggt
    18301 ggaacaagtc gagatctggt gcgtcaaagg ccagcagctc tttgtctgcc acgccggcac
    18361 agggatctgg cgaggtataa cgggcaatat ccagcgccgc ctgtacagta cgggcaatgg
    18421 cctgcgggct taaatcggtg gatgatgcgc tacctttgcg gttctggtga taaacagtga
    18481 tccccagcgc gccatcgcta ttgaattcaa cattctccac ttcaccataa cgcgtgctta
    18541 cgctaatgcc ggtggtcttg ctgacggcaa cttccgcacc gtccgatttg cctgaggcca
    18601 actccagcgc agtggaaact gcttcttcca gaatcttgcg ctgcgcttca acttgagaga
    18661 ttactttcat tgcaagtgcc ataatgtaga gagtttctct gaagtctaac agagaaccgt
    18721 ttttcagtgc gcatcttaac tggtaacatt agcctctttt tttaaggagc ctgagatgac
    18781 taagcagccc gaagactggc tcgacgacgt tcccggtgat gacatcgaag acgaagacga
    18841 tgaaattatc tgggtcagta aaagtgaaat taaacgtgat gccgaggagc taaaacgcct
    18901 tggcgcggaa attgttgatc tggggaaaaa cgcgctggat aagatcccgt tagatgcgga
    18961 tctgcgcgcg gctattgagc tcgcccagcg tattaagatg gaaggtcgcc gccgccagtt
    19021 gcagctcatc ggtaagatgc tgcgccagcg cgatgtagaa ccgatccgtc aggcgctgga
    19081 taagctgaaa aaccgtcaca accagcaggt ggtgctgttc cataaactgg aaaacctgcg
    19141 cgatcgtctg atcgatcaag gtgatgacgc catcgctgag gtattaaatc tgtggcccga
    19201 tgccgatcgt cagcaactgc gtactctgat ccgcaacgcg aagaaagaga aagaagggaa
    19261 taagccgccg aaatccgcac gccagatttt ccagtatctg cgcgaactgg cggagaatga
    19321 agagtaattt tcgttgttga tgtgagtatg gtttgccgga tgcggcgtaa acgccttatc
    19381 cggcaatgct atctcaggct gaggccgaat tactgcgcag cttccgcctt cttcgccaga
    19441 ccatccagca gtttctgatg gatcccacca aaaccgccgt tgctcatcac cagaatatgg
    19501 tcgccaggct gagcggtttt caccaccata tctgccagcg tatccacatc gccactccag
    19561 tgtgcaggct gaacgcaggc ttctgccact tctgccacct gccacggaat atgcgccggt
    19621 tgcagcagga agacttcatc ggcacgacct aatgaaggtg ccaaatcgtc tttgcagatc
    19681 cccattttca tggtattcga gcgcggttcc agcacagcaa taatgcgcgc tgtaccacca
    19741 actttgccac gcagcgccgc cagcgttgcc agaatcgccg tcgggtgatg ggcaaaatcg
    19801 tcatataccg tgacgccatt cgcttcacca cgcaactcca gacggcgacg agcattaata
    19861 aacgaaccca gcgcgttagc ggtatctgcc ggcgctacgc caacatggcg ggccgccgca
    19921 atcgccatca ggccattatg catattatgt tcgcctacca gcgaccattt cacttcgccc
    19981 actttttcgc catccagcaa gacttcccat tcggaagcat cggtggtcag ctttttcgcc
    20041 tgccagtgcc cctgctcacc caccagctcc tgctcgctcc agcagcccat cgccatggtc
    20101 tgtttcaggt tgatgtcatt ttccggccag ataatacggc cctgccccgg aacgatacgc
    20161 accagatggt ggaactgttt ctggatcgct ttcaggtcgt caaagatatc ggcgtgatcg
    20221 aactcaaggt tgttaaggat cagcgtacgc gggcagtaat ggacaaattt agagcgtttg
    20281 tcgaagaagg cgcagtcgta ctcatccgct tcgataacaa agaagtcgct ttcgcccaga
    20341 cgcgccgaaa cctcaaagtt ccccggcaca ccgccgatca caaatcccgg tttgtaacca
    20401 cactgttcca gaatccaggt cgccattccc gcggtggtgg ttttgccgtg tgtaccggca
    20461 acggccagca cccagcggtc gcgcagcaca aaatcgtgca gccactgtgg acctgacata
    20521 taagggatgt ttttttccag taccgcttcc acacacggat ttccacgggt catggcgttg
    20581 ccaataatca ccagatccgg ctgcggatcg agctggctgg catcgtaacc ctgaatcagt
    20641 tcaatgcctt gcttctcaag taaggtgctc atcggcggat acacattggc gtccgaaccc
    20701 gttacttcat ggcctaactg gcgcgccagc atcgccagac cgcccataaa cgtgccacaa
    20761 attcctaaaa tatgaatgcg catacgtcac tatccttttt taatctgccg ctcattttac
    20821 gcatatgtcg ggcaagtgag aaacgcattt caggataatc cgtaatttgc tggcgcgatt
    20881 cacctgagcg caacattgag attatttgtt aagattgttg cggtcgcttt actccataaa
    20941 cattgcaggg aaagttttat gaaaacgtta ggtgaattta ttgtcgaaaa gcagcacgag
    21001 ttttctcatg ctaccggtga gctcactgct ttgctgtcgg caataaaact gggcgccaag
    21061 attatccatc gcgatatcaa caaagcagga ctggttgata tcctgggtgc cagcggtgct
    21121 gagaacgtgc agggcgaggt tcagcaaaaa ctcgacttgt tcgctaatga aaaactgaaa
    21181 gccgcactga aagcacgcga tatcgttgca ggcattgcct ctgaagaaga agatgagatt
    21241 gttgtctttg aaggctgtga acatgcaaaa tacgtggtgc tgatggaccc actggatggc
    21301 tcgtccaaca tcgatgttaa cgtctctgtc ggtaccattt tctccatcta ccgccgagtt
    21361 acgcccgtcg gcacgccggt aacggaagaa gatttcctcc agcctggtaa caaacaggtt
    21421 gcggcaggtt acgtggtata cggctcctct accatgctgg tttacaccac cggatgcggt
    21481 gttcacgcct ttacttacga tccttcgctg ggcgttttct gcctgtgcca ggaacggatg
    21541 cgcttcccgg agaaaggcaa aacctactcc atcaacgaag gaaactacat taagtttccg
    21601 aacggggtga agaagtacat taaattctgc caggaagaag ataaatccac caaccgcccg
    21661 tatacctcac gttatatcgg ttcactggtt gcggatttcc accgtaacct gctgaaaggc
    21721 ggtatttatc tctacccaag caccgccagc cacccggacg gcaaactgcg tttgctttat
    21781 gagtgcaacc cgatggcatt cctggcggaa caagcgggcg gtaaagcgag cgatggcaaa
    21841 gagcgtattc tggatatcat cccggaaact ctgcaccagc gccgttcgtt ctttgtcggc
    21901 aacgaccata tggttgaaga tgtcgaacgc tttatccgtg agttcccgga cgcgtaatct
    21961 cctgcgcctc tccacacgga gaggcatttt tatcgctgcg caatgttgac tcttgtcact
    22021 ggcgaactct gacgattctc ccacagcacc gttaacccac gctgtaatgc tataaaaata
    22081 aacaacaaaa taccgatggc gattttcgtc caccaggaac tcagcgtgcc gtcaaagttg
    22141 atgtaagtct ggatcagtcc ctgaattgcc acgccaaaaa gcgtcccaag caccgtcccg
    22201 acgccaccac ttaacaacgt accgccaatc accaccgacg cgatggcgtc cagttccaca
    22261 cctacgcccg ccagtgcata tccggcctgg gtataaatcg agaagacaat ccccgccagt
    22321 gttgccagtc cggtggagag catataaatg cgaatagtgg tgctgcgagt agaaatcccc
    22381 atcaggttcg ccgacgtcgc gttgccgcca atagcgtaca cctgattgcc aaaacgggta
    22441 cgatgcgcaa ggaaaatacc gataaccacc accagcatca acagccccat cgcactaagg
    22501 tgaccgccgc cggggatttt ccacgcaagg cttgagagcg tgtcataaat gggatggttt
    22561 atcggaatcg actcttccga aacgagatag ctgacgccgc gcaaaaagaa catccccgca
    22621 agcgtaatga taaatgccgg gatcttcagg gcgtcgatca gaagccccat aaatgcgccg
    22681 aaggcacagc ccatcaccag cactagcgga aacgccagca gcggcgagag gccgaaatcg
    22741 ccaaccactt ttgccagaaa cacgccagta aaggcgatca ccgaaccgac ggagagatcg
    22801 ataccgccag agaggatcac aaaggtcata ccaacggcaa taatccccag aaaagcgtta
    22861 tcggtcagga tattgcagat cactcttgtg gaagcaaaac cgggaaactg cgtcaggcag
    22921 tagaaatagc ccagcacaaa gacgccgatg gtgatcatca gtggcaaatt acgttttatc
    22981 acggctacgt actcctttaa tcagactgat aaagcgttgc gactggacaa tcagcacgca
    23041 aagcaccacc accgctttca ccacctggtt catctccggt ggaaagcccg aaagcaaaat
    23101 tccggtgttc atcccctgaa taatcagcgc ccccactacc gagagcagca ggttaaagcg
    23161 cccgcccatc agcgatccgc cgccaatcac caccgcgaga atggcgtcca gctccagcca
    23221 taatccggcg ttgttggcat cggcaccgcg aatatccgcc gccacgataa tgcccgcaat
    23281 cgccgcacac agcccgctca acacataagt gagcatgacg atgatccgcg tgtttacccc
    23341 ggcatttttt gccgcccgaa tgttgatacc aacggcttcg ataaacatcc ccagtgccgt
    23401 tttgcgggtc aacagccaga acaggagaag cgtcagtacc gcaataatga ctgccgttgg
    23461 caggaacaac agcgatccac tgccaaacca tgagagatcc ggcgagttaa acgtgacgat
    23521 ctgtccggag gtgatcagtt gcgccacgcc gcgcccggcg accatcagga tcagggtggc
    23581 gacaaatggc tgaattttga ggatcgctac cagtatgccg ttccacaatc ccgccaggat
    23641 gccggtgccc agggcgctta acaaaacaat cggcaggctg acttccgcga ccgtcatcgc
    23701 agccgttgtg gctccggcga tagccatcac cgcccctacg gagagatcaa tcccaccggt
    23761 ggcgatcacc agcgtcatac caatcgccag taacgcaacg ggggctgcac ggttaagaat
    23821 gtctatgggg ctaccgaaca aacgcccatc ctgaagcact acctgccaga aatgcggggc
    23881 taccaggctg tcgaccagca gcaccagcaa tagtgctacc agctgcggca tccccgtcgg
    23941 ccagcgaaag cgcctttttg gcgtagtggt gtccggaaga gattgaggca tcacactgtt
    24001 ctccttacgc cgcaatggcg ttcatgatag ccggaacgga aagctctgcc agccggatct
    24061 ccgccacctg tttgcgatcg agcatgatga tcacccggtc ggcatagccc accagttctt
    24121 ccagttcgga ggagatcacc agcagcgcca gaccatcggc gcatagcgtt tcaatcaggc
    24181 ggatgatctc ggcgtgggca ccaacatcaa tgccacgggt tggctcatcg aggatcagaa
    24241 attgcggtcg ggtcagtagc caacgtgaaa gcaacacttt ttgctgattg ccgccggaga
    24301 gaaattcaat cggttgttca gttgaaggtg tgcgaatgcc aagctggcgg ataaagcgtt
    24361 cggcaatctc ttgctgctct ttgcgggaaa tgggtcgtag ccagccgcgc tgggcctgga
    24421 gagcgaggat gatattttcc cgcaccgagg cggcagcgat gatgccatcg gttttcctgt
    24481 cttccgggca gaagccgatg cccagtaccg aagcctgatg tggcgatcgc aggttttgcg
    24541 gtttgccttt gatcaacgcc gtgccgctgt cagcaggttt gataccgaag atcacttcgg
    24601 cggtttcggt acgtccggat cccagcaagc ctgccaggcc gacgatctcg ccggggcgca
    24661 cttcgagatc aaacggtgct atcgttcctt ttttgccgta atttttgaac gcggcaacgg
    24721 gtttgtcgct caacaatgtt cgcccggcac gctgtagcgc gtgggtatcc agctcgcgcc
    24781 ccagcatcat ttttaccagt tcgatctgcg gtagctcgcg cgtttcccga cagcctacga
    24841 aactgccgtt gcgtaaaacg gtgatccgat cgctgacctg atagatctga tcgagaaagt
    24901 gagtgacaaa gatcaggctg acgccgcgat cgcgcaactg acgcatcagg ccaaataata
    24961 gctccacttc ctaggtgtcg aggctggcgg tgggttcatc gaggatcagc actttggcgg
    25021 agagatcgat agcccggcaa atggcgacga tttgctgcat cgcgactgaa aagcggttga
    25081 gcggttcgcg cacgtcgagg gagaaaccgt aagatgccat cagttcggtg gcgcgctttt
    25141 ccatctcttt gcggcgtaga aggccgaagc gtttgggttc gcggcctata aatagattat
    25201 cagcgaccga catattgggt agcaggttga cttcctgata gacggtgcca atgccgagtt
    25261 gttgcgcgtg ggcggtattt ttcggtgaga taacctggcc ttccagccag atggtgccgc
    25321 gatcggcgtg gtatacacca gttaatgctt tgattagcgt tgattttccc gccccgtttt
    25381 caccgagcag cgccatgatt tcgccacggc gcaggctgaa atcaacgttg tctaacgctt
    25441 tgacgccggg gaaaaattta cttaatcctt cggtgcggag gatttcctgg tgttggtctg
    25501 tcgtcatggt ttcccccggt gtaaagcgtg ctcccagtag gcatgataag acgcggtaag
    25561 cgtcgcatca ggcttcagtg caccatcgcc ggatgcggcg cgagcgcctt atccggccta
    25621 cgaatcggca tcaggcatag caaccctcaa taccccatat ttttcttctt ctctaactct
    25681 tcttttgcgg tatcaggcag gtaaagggtg gatttggtta acgtcagctt ttcaggcatg
    25741 gtgccgtctt ttttgtattt ctccagcgcg tcaaaagcgg gtcccgccat attcggcgtc
    25801 agttcaacac tggcgttcgc ttcgccatca atcatcgctt tgtagatatc cggtacgcca
    25861 tcgatagaac ctgtcagaat atctttgccc ggtttcaggc ccgcttcttt aattgcctga
    25921 attgcaccaa tcaccatgtc gtcgttatgg gcgtaaacca tgcagatgtt tttgccgttg
    25981 ttttccgctt tgataaagct ctccatgact tctttgcctt tactgcgggt gaagtcacct
    26041 gactgcgagc ggataatttt gatatttggc gcattcttaa tggcttcggc aaagcctttc
    26101 ttacggtcaa tggcgacgct ggccccaacg gtgccctgca gctccaccac gttgcatggt
    26161 ttgccattca cttcttttac cagccagtca ccgatcaact taccttcgag gatgttgtcg
    26221 gcagtaacgg tggtcatata gagagatttg tctttcacat cgatggaacg gtcgagcaag
    26281 aagaccggga tttcggcatc tttcgcctct tttaataccg gttcccaacc cgtcgcaacc
    26341 actggagcga taaagatcgc atccacccct tgtgcaacga aggaacgtac cgctttaatc
    26401 tggttttcct gcttttgctg accatcggca attttcaacg taattccgcg tttttcggcc
    26461 tcacttttcg ccacattggt ttctgcggcg cgccagccgg attccgatcc gacctgcgaa
    26521 aatcctacgg ttaatggagc ggccaacgcc atagacgaca tggctgccga gactgcagag
    26581 actacaagta agcgtttcca catagggttg tcctcgtcgg ggtaattatt attggtgaaa
    26641 agatgttcgc gaaaaaacta tagacaattc gttatgtaac ggattgcgtt acatcacact
    26701 tcaaaaaagt aaataaaacg ttaatcacaa gtttgtaatc gctttcatct cactatgaaa
    26761 aatgcggcta cggttatgga ttttcctgct ctgtataccg tcttaaaact ggcgaaaaag
    26821 gaaaatgaag acgaaaacaa gcaaagacat tcggcgcgag ttggctataa tactcggcac
    26881 ttgtttgcca catattttta aaggaaacag acatgagctt actcaacgtc cctgcgggta
    26941 aagatctgcc ggaagacatc tacgttgtta ttgagatccc ggctaacgca gatccgatca
    27001 aatacgaaat cgacaaagag agcggcgcac tgttcgttga ccgcttcatg tccaccgcga
    27061 tgttctatcc gtgcaactac ggttacatca accacaccct gtctctggac ggtgacccgg
    27121 ttgacgtact ggtcccgact ccgtacccgc tgcagcctgg ttctgtgatc cgttgccgtc
    27181 cggttggcgt tctgaaaatg accgacgaag ccggtgaaga tgcgaaactg gttgcggttc
    27241 cgcacagcaa gctgagcaaa gaatacgatc acattaaaga cgtaaacgat ctgcctgaac
    27301 tgctgaaagc gcaaatcgct cacttcttcg agcactacaa agacctcgaa aaaggcaagt
    27361 gggtgaaagt tgaaggttgg gaaaacgcag aagccgctaa agctgaaatc gttgcttcct
    27421 tcgagcgcgc aaagaataaa taagttcttc tagcgcaata accctgaacg ccgggcttcg
    27481 gttagtaagg gtttttttat gcccgcgata aataaactct ctattccacc atcattattc
    27541 tcagcggttg caaggcttga acggtaagaa caagcaaacc cgaccaccat tttgctgttc
    27601 atagccactt gctggaagtt agccgacctc actcatactc accgttcaaa gcgtgccccc
    27661 gttttacccc tgcacatttg tgaacgccag cagagttttt tatgcgattg cagatatgga
    27721 aagcggctcg gagagaaaag caaaagatgg aaaagttaca aaaaaaaatc gcgagataca
    27781 tcgcataaaa caacgccacc cgaaggtggc gtgcttttat tattacttat ccctgtctaa
    27841 ccagtcgccg ctttcaatta gctttaatcc ctcgacgggt cgttgataaa cgtacatcca
    27901 tgcactcccg tacggcgtct gaatcaactg gcgcgcgtat tcaccgcccc tggtgcgcaa
    27961 ggcatcaagt tcggccagcg tggcgttgtc aatacgataa acttcaccgt gtaccgttcc
    28021 gttccccgga actgcgcctg gatagtggcc caggctatac aactggtagt tatcgatact
    28081 gaaatcgccc agtaactggg cattggtcat ccagtgactg ttgccttgtt tgtggcgtaa
    28141 actgccgtag acaaatattc gcattgctaa aactcgaact gatagagcaa atccagtgcc
    28201 tggtctacac cagacacggc ttccagatat agcttaggca tcaggcgata acgtaacgtg
    28261 agtgttgcta tagagtcaaa tatacccacg ccgtatttca cttgcagacc tggcaataca
    28321 tagccgctga ccactacctg ggaggagtcg cctactccct gggtgtcgag cgctaaattg
    28381 cttacgccaa acgtctcgcc gattttaccc acaatctggc cactttgcgc aacccccaga
    28441 ccaatcagca tcgaggtcat tgccgcactg tcgctctgat cgctctccag cccttgtcca
    28501 cgtagcaaat aagacaatgc agcttgttgc gacatcgccg ggtcagagaa gatctccgct
    28561 ttcggttcgt ccgccagacc agtgacgcga actccggcga ttacgtcgtc ttctgtagca
    28621 tccgggttac gaatagcttc aatattaaga tacggttgat ctggcggacc agagaacagt
    28681 agctcaccct tacgcacaat cagatcctga ccataggcat ggaagcgccc ttcagggatg
    28741 ttgatctgcc cgttcaggcc cagcccttgt ttgtcctgaa cgacgttaag atcgcccgtc
    28801 agccgcgctt tcaggccaaa ggcgtcaatg cgcacattgt tgccaacgtg gacaatcagg
    28861 ttactgttaa tcggaatcga cgccgttttc ggctcttccg gttgcaggtt atcgttaagc
    28921 atcaccacat cgctggagac gcctactgcg ctttccggca gatcgtgcac cacgatgcgc
    28981 gcccacggga catccacgcg accatcgagg gtaaacaggt ttggtgtagc ctcgaataca
    29041 acatctggcg atacatccat tcgtaccatc ggcggcacgg tgatccgcac tttactgcct
    29101 ttcgccgtta ctcgtgcccg ccagttttca atttggctcc agtcggcatc accgttcagg
    29161 tagatttcac cctgctgggt ccgtactgta ccggcaagcg tcgagcgcat accgttaaag
    29221 ttgaccgcaa gctggctcgg ctgcatatca aacggcataa agttgccgtc gatatccaca
    29281 cccgtaacct gaagctgacc aaacaactgc gggctttgca catcaccatc cagacgcaag
    29341 ttggcactca ccatccccgc tgctttttcc ccacgagtaa agatggggtt tatcatcgca
    29401 aggttgaagt tacggatatt gacgttgcca ccaagattac ggcggccttg cggatcggtc
    29461 accagcacct gtccatcaaa ctggccgtta ttggtcaggc ggatggtcca gcccaattcg
    29521 gcacggttgt tacgcaattc cgccgtcaga ttcagtgtct gaaacgccac cggcagcgcc
    29581 gcatcgttga cggtttgcgt tacctgcacg ttacgccccg aaagggtgat actgccctgc
    29641 ggcagcccct ctttcgtggt gtcccaggca acatccgctt tacccgtgaa gataccgctg
    29701 gcctgagtgg tttctggcat aaacggtttc agcatggcga agtcgaagcg gttgagattc
    29761 accaccgcac gcccttcggc ccccgcatcg atagtttgcg gcacgcacag ttccgcattc
    29821 gggttaagcc agcagtgtgg cccgatgctg attttttgct ccttattgcg gtaatccagc
    29881 gcaatatcgc gggtcagcga ccacgggccg accagcgtct ggaagcgggt attgctaaga
    29941 gttcccttcc agcgttcttc tttgcgatca aaacttcctg ccagattaag ctgcccggag
    30001 acaggctcgc cctgaatccg caactgtagc tcgtgctgct tttcgctgcc tttggcattc
    30061 agggtgacga ggttgatatt tacatccggc tgcgaaattt gctcaacgcg tacgtcgagt
    30121 ttcccggcga tctgatcggt ggatttaatg tcgccttcca cgcgaacctg cgtcacggaa
    30181 agttcctgcc agcgcaggcc gcgcgcggtg atatctgcca gtagttgtgg cgcttccacc
    30241 gtgccgcgta ctttcaccag ccctttcgct gtaccgccaa gccccggcag cgcgttatcc
    30301 agccccggcg cgttgatggt ggcatcaaga ttgagatctt ttacccccag ctcgcctttc
    30361 acttcggcac tgtttggccc cagttccaga tgaagcccag ggatcatcca ctgcatataa
    30421 ctgttgcctt tcagcgtgcc gtcaacgttc actttgttct gtttgacgtt accggtcagc
    30481 ttcagttctg gcacctccat ctgccaggtg ccgccgtaca ggctaccgcg ggttttaatc
    30541 aagccattga gtttcgacgg ccactccggg aactctttgg cggtgttaat gccattaagc
    30601 gttagctcac cgcgccaact aatggcctgc tgccagtcga gcaacgcctt gagttcagtt
    30661 ttcccttcca gcgccgcgac ggtgagtttg tcgagattga cctgctgttc attacctttg
    30721 gcatcaaggg taatggtggc tggcgggatc tcctgtccct tcactgccgt acgcatagag
    30781 agcgtgtaat cggtcatttt gccggtaagt ttcagtttca gatcatccgc ctgatactgc
    30841 ttctcaccag tgaacggcca gtaaagctgt ttgctgttca cttccacgtt gagcggcaat
    30901 ccggcttccg ccagtcgcgt ctgggcgcgt aaatccatat ccaccggacc ggaaagatta
    30961 acgccaatct ccagctgttc gcgcagcgcg ccgcccactt ttagcttcac tttttcacct
    31021 ttcaacggct ccacgttcag tgtgctgttg agggtgatat ccaccggcca gttgtctgac
    31081 agctgcgccg tgccgctggc gttgacgatc ccctggttgg aatcgatatc cagggcgtcc
    31141 agtttagtat tgccgtcaat gctgctcact ttcagcagca tggtgcgcac ggtgatgtcc
    31201 gtgtcgcccg tcacgcgtaa ctgctcgcct ttaaactctt caatgttcag gttaagcggc
    31261 aaatgcaagt cggtcatttc cggcaatacc gagcgagaaa agagatcttt cagcgtttcg
    31321 ccgagcggct tttcatccgg ctgcggattt tcaattttcg gttcgaccac ttcttcctgc
    31381 gccacttccg ccactttcgg cagagcaatc agcaggcctt tcagcgacgt cggtttcagg
    31441 gtcagggttt tctcctgcca gttcaggccg gaggtgaagt ccatcaccga caccgtggtg
    31501 tcatcaatct tgatgttgac gttgtccagc gccacccgtg tcagggtgat gggatacggc
    31561 gtggagagat ccagcggacc gctatcttcc tcttcttcaa cctgttcaga aggaggcatt
    31621 tttttactgt cgatgttgac ctgaatgtct ttcagcgcca ggtcattaat acaaacgcta
    31681 ctgttccaca ggcactcaag accgaccgcc agatgcagat tacccgcttt taccgccacg
    31741 cctggctgct cataacgaac gtcagacaag gtgagatcgc gccagccgcc ggtgaccttg
    31801 ccaatatcca gtcctggcac ccagcgatcc gccgctttaa atacaagatg caggccgctg
    31861 gtggtgccca ccagaaacgc caccgatccc agcaacagta agataacgat aaccacgccg
    31921 aggctgattt ttttccataa actcataatt ctggccccag accgatgtaa aactgtaacc
    31981 cgtgttcgtc tttatccgcg accggtacgg caaaatcgag tttgattggc ccgaccggcg
    32041 attcccagcg cacgccgacc ccggtaccgg ttttaaagtc gctgcggcga atatcgctta
    32101 ccgcttcgcc actatcgaca aacaccgcgc cccaccattt tccggtcacg ttgtactggt
    32161 attccagcga tccggttatc aacttcgagg cccctttcag gtcaccgttg gcgtatttcg
    32221 gggcgataga tttgtatttg tagccgcgaa tactgcgatc gcccccggcg aaaaaacgca
    32281 gatccggcgg tactttgtcg aaatcaccgg tttcaatcca gcccagcgtg ccgcgtgtaa
    32341 cgaaacgatg gcgatcgtac agtgtgcgga tccagacgtt ctgcgcctgg aaaacggaga
    32401 aatcgacatc tgagccccag gccgtgttgg agtagtcgat agagtagcgt tgcgagtcgc
    32461 cccaggttgg catcaggcca ccacgagaac gcgtgcggct aatcatcacc ccaggataaa
    32521 acagcatcgt ggtgttggta atttcaccct gagtaaagtg gtcgagactc cagcgcaggt
    32581 taatggcacg ctgccagccg ctggagagat cccagtagcg agaagccacc agcgtagtgg
    32641 agtcagattc ggtatcgttc aggtcagtgc gcttaaaacc gccctgcacc aaataatatt
    32701 gttccagtgg attcttcagc agcggcattt tatagctgaa gtcgagggtc tgttccggcg
    32761 cggaaatact ggtactggtg gtcaaactgt gaccgtatga gttcatccac ggctttttcc
    32821 acgtcgcttt cacgcgcggt cccacgtccg tagagtaacc gaccccggtt tcgatggtgt
    32881 tttctgttcg cggcgaaacc acgcccgtca atggtaatac tttcgtttcg cgcgctttat
    32941 caaattgtgg agccaccacc accgagttaa accagccggt agcagaaagt cggcggttca
    33001 gttccgccag atctttcgat tcatactcat cgccctcttt aaacggcacc agattttgca
    33061 ggtattcatc gcggatttgt gatccttcaa aggtcacatg cccaaagcgg taacgttcgc
    33121 cactgttata atcaatatcc cagaaggctt tatgcaggcc gagcgcaatg cccagctgcg
    33181 ctttggtaaa ttcgctatcg aaataacctt tacgcaacgc aatactggtt aaggactttt
    33241 tgaaattttc ataatcgccc tggttcagta cagtaccaat agccgggcga gtatcgagca
    33301 atttcaaata gtctttatcg gtccgcgcgc cgccgcgcaa taccacatcg gtgccgccaa
    33361 ttaacaccgg cacacctggc gtgactttgg cgatcaatac ctgccgccct ttctttggcg
    33421 gtggacggag atcaaattca atggtcggct ggtaataacc cagcgctttc agaccttcac
    33481 ggatggcatc atcgacgcgt gcgcgaaagc ggcggtctgg cgtcacttca tcactttcaa
    33541 tcgtagaaag ctgcgcacga acgttctttt ccagctgtcc cgataacccc tcgacctgta
    33601 gacggacgtt cgcggcgacg gcagatccgc ttaagcagag taagcttaca cagcataact
    33661 gtcggatata gcgcacattt tctcctgaat atcctttttt cctgcccctg gaacgccgtt
    33721 aaacggctta acaaaaatcc agtaatatgg attaaaaagc agactaaacc ccaaatattt
    33781 cttatgtttt actttagacc tattcacggt ggttattgtg tgcaaatacg cctcttgtta
    33841 caaccttaac cccaatgacc gattttcggg agagcgacac catgagttta tttgataaaa
    33901 agcatctggt ttcccccgcc gatgccctgc ctggacgtaa caccccgatg cccgtagcca
    33961 cgctgcatgc ggtcaacggt cactcaatga ccaatgtacc tgacggaatg gagattgcca
    34021 tttttgcgat gggttgtttc tggggtgtgg agagtctgtt ctggcagtta cccggcgttt
    34081 acagcaccgc cgcaggctat accggcggct atacgccaaa tccgacttat cgggaagtgt
    34141 gctccggtga tacgggtcat gccgaagcgg tacgcattgt ttacgatcct tccgtcatca
    34201 gctatgagca gttgctacag gtattttggg agaatcacga tcccgcccag ggaatgcgtc
    34261 agggcaatga ccacggcacg cagtatcgtt cagcgattta tccgctgacc ccagaacagg
    34321 atgccgcagc tcgcgccagt ctggaacgtt ttcaggcggc gatgcttgcc gccgatgacg
    34381 atcgtcacat caccacggaa atcgctaacg ccacaccgtt ttattatgcc gaagatgacc
    34441 accagcaata tctgcataaa aacccatatg gttactgtgg aattggcgga attggcgtct
    34501 gtctgccgcc ggaagcatag cgttacgggt acaaatgtag tttgttgata aagtgctctt
    34561 tgtctatgcc tgatgcggct taaacgactt accaggccta caaaatcgtc caaattcaat
    34621 atattgcaag gactgcgtag gcctgatcgg catagcgcat caggcagtat tgcatttatc
    34681 agcagtctga attttaaccc tctggcgact ttacagtacc ttacgctata ctagccactg
    34741 aaaatgccgg ttcactttct tcgaatcggc tttcaatgtg tatttcacac aaattaatca
    34801 actttccctt ccgaggatct ggcctgaaag gtcggataag atatgttaaa cagtatttta
    34861 gtcatactct gcttgatcgc tgtaagtgcg ttcttctcga tgtccgagat ctcgcttgcc
    34921 gcctcacgca aaatcaaact taaactgctg gctgatgaag gcaatataaa tgcccaacgc
    34981 gttctgaata tgcaggaaaa tcccggcatg ttctttaccg tggtccaaat cggtctgaac
    35041 gcagtggcga ttctcggcgg tatcgtcggt gatgcggcat tttctccagc ttttcacagc
    35101 ctgttctccc gctatatgtc ggcagagctc tctgagcaac tgagctttat tctctctttc
    35161 tcgttagtga ctggcatgtt tatcctgttt gcggatttaa ccccgaaacg catcggtatg
    35221 attgcgccag aagcggtggc tttgcgtatc atcaacccga tgcgcttctg cctgtacgtt
    35281 tgcaccccgc tggtgtggtt cttcaacggc ctggcgaaca tgatcttccg tattttcaaa
    35341 ctgccaatgg tacgtaaaga tgacatcact tctgatgaca tctacgcggt agtggaagcc
    35401 ggtgcgctgg cgggcgtgtt acgtaaacag gaacacgagc tgattgaaaa cgtctttgag
    35461 ctggaatccc gtaccgttcc gtcttcaatg acaccgcgtg aaaacgtgat ttggtttgat
    35521 ctccacgaag atgagcaaag cctgaagaat aaggtggcgg aacatccgca ctctaagttc
    35581 ctcgtctgta atgaagatat tgaccacatc atcggttatg tcgattctaa agacctgctg
    35641 aaccgcgtgc tggctaacca aagcctggca ctgaacagcg gcgtacaaat tcgcaacacg
    35701 ctgattgtgc cggatacgtt aaccctttca gaggcgttgg aaagttttaa aaccgcaggt
    35761 gaagacttcg cggtgatcat gaacgagtac gcgctggtgg tggggatcat caccctcaac
    35821 gacgtgatga ccacgctgat gggcgatctg gtcggtcagg ggctggaaga gcagattgtc
    35881 gcccgtgatg agaactcatg gctgattgac ggcggcaccc caattgacga cgtcatgcgc
    35941 gtgctggata ttgacgagtt cccgcagtcg ggcaactacg aaaccatcgg cggctttatg
    36001 atgtttatgc tgcgtaagat cccgaaacgc accgattcgg tgaaattcgc cggctacaaa
    36061 tttgaagtgg tggatatcga taactaccgc atcgaccagc tgctggtgac ccggatcgac
    36121 agcaaggcca ccgccctttc gccaaaactg cctgacgcta aagataaaga agaaagcgtc
    36181 gcgtaacccc cagaaacatc aacggctcct gaatcaggag ccgtcttatt actgcatagc
    36241 actttggtta agccatctct gtttgcagac gcataacctg acggttaact tcggacatca
    36301 ctgacaaatg cagcttatcc ttcacttttg ggataagaat cttaccctta tcaaattcaa
    36361 aagcgccaac gtccttgatg tataaccgtc cacggaacag gatctttacg tacttcgcca
    36421 cctgaagtgg gttgtaccgt tggaaaattt tcattgttat ctcctgctga gtattacgcc
    36481 tgtgcggtgc cacaatcggc ccaactatta tgagacgcaa attttaatgc ttagtgacta
    36541 tagactatcc gggcaatgtt tccaccgcgt ataacttttt ttacctaaag gttacaatta
    36601 ttcagaatta tctttttacc gaagcgcggt cttcagtata agcattcatt tttcatatga
    36661 tttgtgcgct tgaccgcaaa ctggcatcac acttgcggga aattcgataa atagcacata
    36721 tgattaaaac tcagatccaa gtggtcggat cacctgcata tcataagaag gaaacaccat
    36781 gaccctacgc aagattctgg cactcacctg cctgctgttg ccgatgatgg cttccgcaca
    36841 tcagttcgaa accggtcagc gagtgccgcc gattggcatt accgatcggg gcgagttggt
    36901 gcttgataaa gatcagttta gctacaaaac ctggaacagc gcgcagttag tgggaaaagt
    36961 gcgagtactg caacatattg ctggtcgcac ctctgcaaaa gagaaaaacg cgacgctgat
    37021 tgaagcgatt aaatcagcaa agttaccgca cgatcgttac cagaccacca ccattgttaa
    37081 caccgacgac gcaattccgg gttccggcat gtttgtgcgc agcagtctgg agagtaataa
    37141 aaagctttat ccctggtcgc agtttattgt cgatagcaat ggcgtcgcgc gcggtgcctg
    37201 gcagctggat gaagaaagtt ccgctgtagt ggtgctggat aaggatggtc gcgtgcaatg
    37261 ggccaaagac ggggcgctca cacaggaaga ggtgcagcaa gtgatggacc tgctgcaaaa
    37321 gttgctcaaa taatggcaat aacataaatt ctgcaaaaat aattttcccc tatcgttatc
    37381 tatgggatag gggaattagg tctctgagct cttacaccga actcatactg gtaacgctag
    37441 ttgctctttt ttaaacgcct caatggttga tttatatttc tcgcaaatct cctcttcggt
    37501 aatatcacta tctacggcca gattcgcact tactatcgca tccacttgtt cggctaattc
    37561 gacttgttgg caacctgcat taaccagaaa attataaata agagagtaat cttcatcctc
    37621 caaaacaaca gaggaaccat tacgaaaacg ttcatcccct ccatagattt taagcgcaaa
    37681 gcccaaagat tctatgacta tggcaaaatt atcatcaatt a
//
LOCUS       DADMHC010000016        35456 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.016, whole genome shotgun sequence.
ACCESSION   DADMHC010000016 DADMHC010000000
VERSION     DADMHC010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 35456)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35456)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35456
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.016"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            43..1215
                     /locus_tag="JNZ57_000644"
     CDS             43..1215
                     /locus_tag="JNZ57_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath protein"
                     /protein_id="HAY8826964.1"
                     /translation="MAQDYHHGVRVVEVNEGTRSITTVSTAIVGMVCTGDDADAKMFP
                     LNKPVLITDVLTASGKAGESGTLARSLDAIADQAKPVTVVVRVPQGETEEETTTNIIG
                     AVTAEGKKTGMKALLSAQSQLGVKPRILGVPGHDTKAVATELLSVAQSLRGFAYLSAY
                     GCKTVQEAITYRENFSQREGMLIWPDFTGWDTVLNAEATAYATARALGLRAKIDEQTG
                     WHKSLSNVGVNGVTGISADVFWDLQDPATDAGLLNQNDITTLIRKDGFRFWGSRCLSD
                     DPLFAFENYTRTAQVLMDTMAEAHMWAVDKPLNPSLARDIIEGIRAKMRSLVSQGYLI
                     GGDCWLDESVNDKDTLKAGKLTIDYDYTPVPPLENLMLRQRITDQYLVNFSSQVSA"
     gene            1225..1740
                     /locus_tag="JNZ57_000645"
     CDS             1225..1740
                     /locus_tag="JNZ57_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HAY8826965.1"
                     /translation="MALPRKLKHLNLFNDGNNWQGIVESLTLPKFTRKYEKYRGGGMP
                     GAVDVDLGLDDSALDTEFSIGGTELLLFKQMGKATVDGIQLRFTGSIQRDDTGEVQAV
                     ELVVRGRHKEVDSGEWKTGESNTTKVTSTNSYAKLTINGEVLYEVDLINMVEIVDGVD
                     LMEAHRNALGL"
     gene            1795..2097
                     /locus_tag="JNZ57_000646"
     CDS             1795..2097
                     /locus_tag="JNZ57_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HAY8826966.1"
                     /translation="MSDKQTEKTIQLDTPIMRGKTEITEIVLRKPQSGALRGTRLQAI
                     MDMDVNAMMTVIPRISSPALTAQEIAEMDPADLTAMSVEVVTFLLKKSVLAGLPTA"
     gene            2112..2231
                     /locus_tag="JNZ57_000647"
     CDS             2112..2231
                     /locus_tag="JNZ57_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HAY8826967.1"
                     /translation="MADIATIFHWPPSVTDVMPLTEVLEWRDKAIQRSGASHE"
     gene            2224..5301
                     /locus_tag="JNZ57_000648"
     CDS             2224..5301
                     /locus_tag="JNZ57_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001282780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HAY8826968.1"
                     /translation="MSDNNLRLQVILNAVDKLTRPFRSAQASSRELAAAVKKSRDAIK
                     QLDQAGSSLDSFRKLQAENQKLGDRLNYARQRANLLSQELGAMGPPSQRQVVALGRQR
                     LAVQRLEERQKKLQQQTALVRAELYRAGISANDGASATARITRETMRYNRQLSEQEAR
                     LRRVGEQQRKMHAARGAYARRLEVRDRIAGAGATTTAAGLAMGAPVMAAVKSYTSMED
                     AMKGVAKQVNGLRDDNGNRTARFYEMQGAIKAASEQLPMENGAVDFAALVEGGARMNV
                     ANPDDSWEDQKRDLLAFASTAAKAATAFELPADELSESLGKIAQLYKIPTRNIEQLGD
                     ALNYLDDNAMSKGADIIDVMQRLGGVADRLDYRKAAALGSTFLTLGAAPEVAASAANA
                     MVRELSIATMQSKSFFEGMNLLKLNPEVIEKQMTKDAMGTIQRVLEKVNALPQDKRLS
                     AMTMLFGKEFGDDAAKLANNLPELQRQLKLTAGNDALGSMQKESDINKDSLSAQWLLV
                     KTGAQNTFSSLGETLRQPLMDILYTVKSVTGALRRWVEANPELTGTLMKVAAVVAAVT
                     VGLGTLAVALAAVLGPLAVIRLGFSVLGIKTLPSVTAAVTRTSNALSWLAGAPLALLR
                     RGLASSGNAAGLLTAPLSSLRRTASLTGNVLKTVAGAPVALLRSGLSGLRAVAVMFMN
                     PLAVLRGGLAATGTVLRMLASGPLAMLRVALYAVSGLLGALLSLIGLVVTALAGVALV
                     VWKYWQPITAFLGGVVEGFKAAAGPVSAAFEPLKPVFQWIGDKVQALWGWFTDLLTPV
                     KSTSAELQSAAAMGRRFGEALAEGLNMVMHPLDSLKSGVSWLLEKLGIVSKEAAKAKL
                     PESVTRQQPATVNADGKVMMPSGGFPSWGYGFAGMYDSGGYIPRGQFGIVGENGPEIV
                     NGPANVTSRRNTAALAAVVAGMMGVAATPVELPPLHPLALPAKGGEAMVSRAATVPPV
                     QRIEAPMQIIIQTQPGQSAQDIAREVARQLDERERRLKAKARSNYSDQGGYDA"
     gene            5298..5783
                     /locus_tag="JNZ57_000649"
     CDS             5298..5783
                     /locus_tag="JNZ57_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8826969.1"
                     /translation="MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLG
                     PDNDMLTLSGVLMPEVTGGRLSLLALEQMAEQGKAWPLIEGSGTIYGMYVIEGLNQTK
                     TEFFRDGMPRRIEFTLSLKRVDESLSDMFGDLSAQLNNLQGTATSALSDISKTVGGLL
                     S"
     gene            5780..6880
                     /locus_tag="JNZ57_000650"
     CDS             5780..6880
                     /locus_tag="JNZ57_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
                     /protein_id="HAY8826970.1"
                     /translation="MNFSSELLNKGNKTPAFSISIEGRDITTVLDNRLMGLTLTDNRG
                     FEADQLDLELDDADGKIVLPRRGAVITLALGWKGQPLFPKGAFTVDEIEHTGAPDRLT
                     IRARSADFRETLNTRREKSWHKTTVGEVVKEIAARHKLKMALGEDLSDKLVEHIDQTN
                     ESDGSFLMRLARQYGAIASVKNGNLLFIRQGQGKSASGKPLPVITITRKDGDSHRFTL
                     ADRGAYTGVIASWLHTREPAKKESTTVKRKRRTKKQKKEPEAKQGDYLVGTDENVLVL
                     NRTYANRSNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMPVKVSGFKQPIDDAE
                     WTITTLTHTVSPDNGFTTSLELEVRIDDFEME"
     gene            6972..7190
                     /locus_tag="JNZ57_000651"
     CDS             6972..7190
                     /locus_tag="JNZ57_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001504085.1"
                     /note="in E. coli K-12 this is in prophage P2 remnant;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY8826971.1"
                     /translation="MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHET
                     FVRSIATPKESNPVQPHPMKSGQVALSL"
     gene            complement(7426..9111)
                     /locus_tag="JNZ57_000652"
     CDS             complement(7426..9111)
                     /locus_tag="JNZ57_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001024888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate:alanine antiporter"
                     /protein_id="HAY8826972.1"
                     /translation="MNINVAELLNGNYILLLFVVLALGLCLGKLRLGSIQLGNSIGVL
                     VVSLLLGQQHFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGS
                     ALVIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHSGMESRQLSLALDNLS
                     LGYALTYLIGLVSLIVGARYLPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAY
                     RVGPELVAWTDGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYP
                     DAHARLDPSFRNGKEVFDRDLLDMRIVTEEVVVKNHNAVGKRLAQLKLTDHGCFLNRV
                     IRSQIEMPIDDNVVLNKGDVLQVSGDARRVKTIADRIGFISIHSQVTDLLAFCAFFVI
                     GLMIGMITFQFSTFSFGMGNAAGLLFAGIMLGFMRANHPTFGYIPQGALSMVKEFGLM
                     VFMAGVGLSAGSGINNGLGAIGGQMLIAGLIVSLVPVVICFLFGAYVLRMNRALLFGA
                     MMGARTCAPAMEIISDTARSNIPALGYAGTYAIANVLLTLAGTIIVMVWPGLG"
     gene            9381..9758
                     /locus_tag="JNZ57_000653"
     CDS             9381..9758
                     /locus_tag="JNZ57_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8826973.1"
                     /translation="MKHKQRWAGAICCFVLFIVVCLFLATHMKGAFRAAGHPEIGLLF
                     FILPGAVASFFSQRREVLKPLFGAMLAAPCSMLIMRLFFSPTRSFWQELAWLLSAVFW
                     CALGALCFLFISSLFKPQHRKNQ"
     gene            complement(9788..10045)
                     /gene="grxA"
                     /locus_tag="JNZ57_000654"
     CDS             complement(9788..10045)
                     /gene="grxA"
                     /locus_tag="JNZ57_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 1"
                     /protein_id="HAY8826974.1"
                     /translation="MQTVIFGRSACPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGIT
                     KEDLQQKAGKPVETVPQIFVDQQHIGGYTDFAAWVKENLDA"
     gene            10205..10492
                     /locus_tag="JNZ57_000655"
     CDS             10205..10492
                     /locus_tag="JNZ57_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1418 family protein"
                     /protein_id="HAY8826975.1"
                     /translation="MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEV
                     QILMIFLGVLLMLPAAVVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH"
     gene            10476..11198
                     /gene="nfsA"
                     /locus_tag="JNZ57_000656"
     CDS             10476..11198
                     /gene="nfsA"
                     /locus_tag="JNZ57_000656"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase NfsA"
                     /protein_id="HAY8826976.1"
                     /translation="MTPTIELICGHRSIRHFTDEPISEAQCEAIINSARATSSSSFLQ
                     CSSIIRITDKALREELVTLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQLGLAEQLL
                     LGVVDTAMMAQNALTAAESLGLGGVYICGLRNNIEAVTKLLKLPQHVLPLFGLCLGWP
                     ADNPDLKPRLPASILVHENSYQPLDKDALAQYDEQLAEYYLTRGSNNRRDTWSDHIRR
                     TIIKESRPFILDYLHKQGWATR"
     gene            11259..12161
                     /gene="rimK"
                     /locus_tag="JNZ57_000657"
     CDS             11259..12161
                     /gene="rimK"
                     /locus_tag="JNZ57_000657"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6--L-glutamate ligase"
                     /protein_id="HAY8826977.1"
                     /translation="MKIAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPA
                     ASSIHYKGRKLPHFDAVIPRIGTAITFYGTAALRQFEMLGSYPLNESVAIARARDKLR
                     SMQLLARQGIDLPVTGIAHSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAETRQAA
                     ESVIDAFRGLNAHILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAKEGDFRSNLHRGG
                     AASVASITPQEREIAIKAARTMALDVAGVDILRANRGPLVMEVNASPGLEGIEKTTGI
                     DIAGKMIRWIERYATTEYCLKTGG"
     gene            12249..12725
                     /locus_tag="JNZ57_000658"
     CDS             12249..12725
                     /locus_tag="JNZ57_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjN domain-containing protein"
                     /protein_id="HAY8826978.1"
                     /translation="MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVF
                     DAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVC
                     QSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH"
     gene            13076..14188
                     /gene="potF"
                     /locus_tag="JNZ57_000659"
     CDS             13076..14188
                     /gene="potF"
                     /locus_tag="JNZ57_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein PotF"
                     /protein_id="HAY8826979.1"
                     /translation="MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIAPD
                     TVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLD
                     KSKLPEWKNLDPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSW
                     DLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLR
                     PNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAF
                     FDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKAATPLVSAEVRENPG
                     IYPPADVRAKLFTLKVQDPKIDRVRTRAWTKVKSGK"
     gene            14283..15416
                     /gene="potG"
                     /locus_tag="JNZ57_000660"
     CDS             14283..15416
                     /gene="potG"
                     /locus_tag="JNZ57_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000996010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter ATP-binding subunit
                     PotG"
                     /protein_id="HAY8826980.1"
                     /translation="MNDAIPRPQAKTRKALTPLLEIRNLTKSYDGQHAVDDVSLTIYK
                     GEIFALLGASGCGKSTLLRMLAGFEQPSAGQIMLDGVDLSQVPPYLRPINMMFQSYAL
                     FPHMTVEQNIAFGLKQDKLPKAEIASRVHEMLGLVHMQEFAKRKPHQLSGGQRQRVAL
                     ARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAG
                     RIAIMNRGKFVQIGEPEEIYEHPTTRYSAEFIGSVNVFEGVLKERHEDGLVLYSPGLV
                     HPLKVDADASVVDNVPVHVALRPEKIMLCEEPPANGCNFAVGEVIHIAYLGDLSVYHV
                     RLKSGQMISAQLQNAHRHRKGLPTWGDEVRLCWEVDSCVVLTV"
     gene            15426..16379
                     /gene="potH"
                     /locus_tag="JNZ57_000661"
     CDS             15426..16379
                     /gene="potH"
                     /locus_tag="JNZ57_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter permease PotH"
                     /protein_id="HAY8826981.1"
                     /translation="MNTLEPAAQSKPPGGFKLWLSQLQMKHGRKLVIALPYIWLILLF
                     LLPFLIVFKISLAEMARAIPPYTELMEWADGQLSITLNLGNFLQLTDDPLYFDAYLQS
                     LQVAAISTFCCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKN
                     NGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAA
                     LDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQ
                     EFFNNRDWPVAAAVAIIMLLLLIVPIMWFHKHQQKSVGEHG"
     gene            16376..17221
                     /gene="potI"
                     /locus_tag="JNZ57_000662"
     CDS             16376..17221
                     /gene="potI"
                     /locus_tag="JNZ57_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter permease PotI"
                     /protein_id="HAY8826982.1"
                     /translation="MNNLPVVRSPWRIVILLLGFTFLYAPMLMLVIYSFNSSKLVTVW
                     AGWSTRWYGELLRDDAMMSAVGLSLTIAACAATAAAILGTIAAVVLVRFGRFRGSNGF
                     AFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVIS
                     SRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFV
                     SGPGATTLPMLVFSSVRMGVNPEINALATLILGAVGIVGFIAWYLMARAEKQRIRDIQ
                     RARHG"
     gene            17281..17769
                     /locus_tag="JNZ57_000663"
     CDS             17281..17769
                     /locus_tag="JNZ57_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjO family protein"
                     /protein_id="HAY8826983.1"
                     /translation="MEDETLGFFKKTSSSHARLNVPALVQVAALAIIMIRGLDVLMIF
                     NTLGVRGIGEFIHRSVQTWSLTLVFLSSLVLVFIEIWCAFSLVKGRRWARWLYLLTQI
                     TAASYLWAASLGYGYPELFSIPGESKREIFHSLMLQKLPDMLILMLLFVPSTSRRFFQ
                     LQ"
     gene            17810..18937
                     /gene="rlmC"
                     /locus_tag="JNZ57_000664"
     CDS             17810..18937
                     /gene="rlmC"
                     /locus_tag="JNZ57_000664"
                     /EC_number="2.1.1.189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(747)-C(5))-methyltransferase
                     RlmC"
                     /protein_id="HAY8826984.1"
                     /translation="MQCALYDAGRCRSCQWITQLIPEQLSAKTADLKNLLADFPVEEW
                     CAPVSGPEQGFRNKAKMVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALK
                     PFIACAGLTPYNVARKRGELKYILLTESQSDGGMMLRFVLRSETKLAQLRKALPWLQE
                     QLPQLKVITVNIQPVHMAIMEGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVA
                     SQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCATPDMQLTGIEIAPEAIACAKQSAA
                     ELGLTRLQFQALDSTQFATAQGEVQELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSC
                     NAQTMAKDIRELPGFRIERVQLFDMFPHTAHYEVLTLLVKQ"
     gene            complement(19112..19843)
                     /gene="artJ"
                     /locus_tag="JNZ57_000665"
     CDS             complement(19112..19843)
                     /gene="artJ"
                     /locus_tag="JNZ57_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8826985.1"
                     /translation="MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIV
                     GFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTT
                     PYYENSAVVIAKKDTYKAFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAF
                     IDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLE
                     KLNNALAAIKADGTYQKINDQWFPQ"
     gene            complement(20134..20802)
                     /gene="artM"
                     /locus_tag="JNZ57_000666"
     CDS             complement(20134..20802)
                     /gene="artM"
                     /locus_tag="JNZ57_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtM"
                     /protein_id="HAY8826986.1"
                     /translation="MFEYLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVL
                     VWLVRGYITLFTGTPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNS
                     AAYTTQLFYGAIRAIPEGQWQSCSALGMSKKDTLAILLPYAFKRSLSSYSNEVVLVFK
                     STSLAYTITLMEVMGYSQLLYGRTYDVMVFGAAGIIYLVVNGLLTLMMRLIERKALAF
                     ERRN"
     gene            complement(20802..21518)
                     /gene="artQ"
                     /locus_tag="JNZ57_000667"
     CDS             complement(20802..21518)
                     /gene="artQ"
                     /locus_tag="JNZ57_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtQ"
                     /protein_id="HAY8826987.1"
                     /translation="MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESEKWRPVA
                     WAGSALVTILRGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPVQMDIENFDVS
                     PFLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRH
                     ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLL
                     SQYILKRIDLRATRFERRPS"
     gene            complement(21525..22256)
                     /gene="artJ"
                     /locus_tag="JNZ57_000668"
     CDS             complement(21525..22256)
                     /gene="artJ"
                     /locus_tag="JNZ57_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8826988.1"
                     /translation="MKKVLIAALIAGFSLSATAAETIRFATEASYPPFESIDANNQIV
                     GFDVDLAQALCKEIDATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFTT
                     PYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMDKHPEITTVPYDSYQNAK
                     LDLQNGRIDGVFGDTAVVTEWLKDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTELQQ
                     KLNTALEKVKKDGTYETIYNKWFQK"
     gene            complement(22274..23002)
                     /gene="artP"
                     /locus_tag="JNZ57_000669"
     CDS             complement(22274..23002)
                     /gene="artP"
                     /locus_tag="JNZ57_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter ATP-binding protein
                     ArtP"
                     /protein_id="HAY8826989.1"
                     /translation="MSIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSL
                     LRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQQN
                     LIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMMEP
                     QVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEVEVARKTASRVVYMENGH
                     IVEQGDASCFTEPQTEAFKNYLSH"
     gene            complement(23220..23735)
                     /locus_tag="JNZ57_000670"
     CDS             complement(23220..23735)
                     /locus_tag="JNZ57_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY8826990.1"
                     /translation="MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPGNV
                     AQQFYDYRILHRSNDITALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPES
                     ARVASASTIPNRDARNIPLRVDLKQGDQSWQDEVLMIQEGQCWVIDDVRYLGGSVHAT
                     AGTLRQSIENR"
     gene            23861..24184
                     /locus_tag="JNZ57_000671"
     CDS             23861..24184
                     /locus_tag="JNZ57_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HAY8826991.1"
                     /translation="MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVG
                     GRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTA
                     VKTRR"
     gene            24181..25011
                     /locus_tag="JNZ57_000672"
     CDS             24181..25011
                     /locus_tag="JNZ57_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HAY8826992.1"
                     /translation="MRRVFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRI
                     KVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI
                     SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP
                     ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASL
                     LELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD
                     "
     gene            complement(25008..26021)
                     /locus_tag="JNZ57_000673"
     CDS             complement(25008..26021)
                     /locus_tag="JNZ57_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415389.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HAY8826993.1"
                     /translation="MKVLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKMG
                     AEFVPADLTELVSSQAKVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAV
                     AWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAASEEVINMFSQANPQ
                     TRFTILRPQSLFGPHDKVFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLA
                     SQEACDKLPSGRVYNITNGEHRTLCSIVQKLIDELNIDCRIRSVPYPMLDMIARSMER
                     LGRKSAKEPPLTHYGVSKLNFDFTLDITRAQEELGYQPVITLDEGIEKTAAWLRDHGK
                     LPR"
     gene            complement(26120..27550)
                     /locus_tag="JNZ57_000674"
     CDS             complement(26120..27550)
                     /locus_tag="JNZ57_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY8826994.1"
                     /translation="MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQL
                     ANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVP
                     VKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMR
                     DMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQ
                     FEHFMAVSGKRRWLIPIPLPTRWISVWFLNVITSVPPTTARALIQGLKHDLLADDTAL
                     RALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKT
                     SASLAALWQVVNQIGGKERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVD
                     SWKVIVVEPEKQLTLLFGMKAPGLGRLCFSLEDKGDYRTIDVRAFWHPHGMPGLFYWL
                     LMIPAHLFIFRGMAKQIARLAEQSTD"
     gene            complement(27561..28562)
                     /gene="ltaE"
                     /locus_tag="JNZ57_000675"
     CDS             complement(27561..28562)
                     /gene="ltaE"
                     /locus_tag="JNZ57_000675"
                     /EC_number="4.1.2.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low-specificity L-threonine aldolase"
                     /protein_id="HAY8826995.1"
                     /translation="MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAA
                     ELSGKEAAIFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPHP
                     IDAAADGTLPLDKVAMKIKPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFTRERN
                     LALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAI
                     RWRKMAGGGMRQSGILAAAGMYALKNNVARLQEDHDNAAWMAEQLREAGADVMRQDTN
                     MLFVRVGEENAAALGEYMKVRNVLINASPIVRLVTHLDVSREQLAEVAAHWRAFLAR"
     gene            complement(28599..30317)
                     /gene="poxB"
                     /locus_tag="JNZ57_000676"
     CDS             complement(28599..30317)
                     /gene="poxB"
                     /locus_tag="JNZ57_000676"
                     /EC_number="1.2.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001532507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone-dependent pyruvate dehydrogenase"
                     /protein_id="HAY8826996.1"
                     /translation="MKQTVAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGTIEW
                     MSTRHEEVAAFAAGAEAQLSGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHI
                     PSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVVVLP
                     GDVALKPAPEGATTHWYHAPQPVVTPEEEELRKLAQLLRYSSNIALMCGSGCAGAHKE
                     LVEFAGKIKAPIVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQF
                     PYRAFYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLRALLPLVEEKADRKFLDK
                     ALEDYRDARKGLDDLAKPSEKAIHPQYLAQQISHFAADDAIFTCDVGTPTVWAARYLK
                     MNGKRRLLGSFNHGSMANAMPQALGAQATEPERQVVAMCGDGGFSMLMGDFLSVVQMK
                     LPVKIVVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKASEVD
                     EALQRAFSIDGPVLVDVVVAKEELAIPPQIKLEQAKGFSLYMLRAIISGRGDEVIELA
                     KTNWLR"
     gene            complement(30450..31418)
                     /gene="hcr"
                     /locus_tag="JNZ57_000677"
     CDS             complement(30450..31418)
                     /gene="hcr"
                     /locus_tag="JNZ57_000677"
                     /EC_number="1.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001522746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH oxidoreductase"
                     /protein_id="HAY8826997.1"
                     /translation="MTMPTNQCPWRMQVHHITQETPDVWTISLICHDYYPYRAGQYAL
                     VSVRNSAETLRAYTISSTPGVSEYITLTVRRIDDGVGSQWLTRDVKRGDYLWLSDAMG
                     EFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNRPQADVRVIYNVRTPQDVIFADEW
                     RNYPVTLVAENNVTEGFIAGRLTRELLAGVPDLASRTVMTCGPAPYMDWVEQEVKALG
                     VTRFFKEKFFTPVAEAATSGLKFTKLQPAREFYAPVGTTLLEALESNNVPVVAACRAG
                     VCGCCKTKVVSGEYTVSSTMTLTDAEIAEGYVLACSCHPQGDLVLA"
     gene            complement(31430..33082)
                     /gene="hcp"
                     /locus_tag="JNZ57_000678"
                     /gene_synonym="priS"
     CDS             complement(31430..33082)
                     /gene="hcp"
                     /locus_tag="JNZ57_000678"
                     /gene_synonym="priS"
                     /EC_number="1.7.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415394.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxylamine reductase"
                     /protein_id="HAY8826998.1"
                     /translation="MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQG
                     LSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQC
                     LAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLK
                     GAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSIL
                     DAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLP
                     AHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVSAYDDRIWTRS
                     IVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVS
                     REKLRHIFLLGGCDGARGERHYFTDFATIVPDDCLILTLACGKYRFNKLEFGDIEGLP
                     RLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVK
                     NIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA"
     gene            complement(33226..34125)
                     /gene="lysO"
                     /locus_tag="JNZ57_000679"
     CDS             complement(33226..34125)
                     /gene="lysO"
                     /locus_tag="JNZ57_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415395.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lysine exporter LysO"
                     /protein_id="HAY8826999.1"
                     /translation="MFSGLLIILVPLIVGYLIPLRQQAALKVINQLLSWMVYLILFFM
                     GISLAFLDNLASNLLAILHYSAVSITVILLCNIAALMWLERGLPWRNHHQQEKLPSRI
                     AMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQ
                     IVLNRRGMIVAVVVVVSSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFG
                     PVIGSAAFFNDLARELIAIMLIPGLIRRSCSTALGLCGATSMDFTLPVLQRTGGLDMV
                     PAAIVHGFILSLLVPILIAFFSA"
     gene            complement(34618..35313)
                     /gene="aqpZ"
                     /locus_tag="JNZ57_000680"
     CDS             complement(34618..35313)
                     /gene="aqpZ"
                     /locus_tag="JNZ57_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin Z"
                     /protein_id="HAY8827000.1"
                     /translation="MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFG
                     LTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLI
                     ASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATAKFAPAG
                     FAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGII
                     GGLIYRTLLEKRD"
BASE COUNT         8550 a         9045 c         9614 g         8247 t
ORIGIN      
        1 caacataggg cgaagcctaa tccaatcagg aggttcgcca ctatggctca ggattaccac
       61 cacggggtgc gcgttgttga agtcaacgaa ggcacccgat ccattaccac ggtgagcacc
      121 gccatcgtgg gtatggtctg cacgggcgat gatgccgatg caaaaatgtt tcctcttaat
      181 aaacctgtgc tgatcactga tgtgctgacc gccagcggta aagcgggtga gtctggcacg
      241 ctggcccgtt cgctggatgc catcgctgac caggcaaaac ccgtgaccgt tgttgtgcgt
      301 gtgccgcagg gtgaaacgga agaagaaacc acaaccaata tcattggcgc agtgaccgcc
      361 gagggtaaaa aaacaggtat gaaagccctg ttatctgccc agtcacagct cggcgttaaa
      421 ccgcgcattc tcggcgtgcc aggtcacgac acgaaggcgg tagctactga gttgctgagc
      481 gtggcgcaaa gcctgcgtgg atttgcttac ctgtcagcgt atggttgcaa gacggtgcag
      541 gaagcaatca cttaccgtga aaacttcagt cagcgtgaag gaatgctgat ctggcccgac
      601 tttactggct gggacacggt gctgaatgcc gaagcaacgg cttatgccac cgcccgtgcg
      661 ctcggtctgc gcgctaaaat tgatgagcag accggatggc acaaaagcct gtccaacgtg
      721 ggcgtgaacg gtgtcaccgg aatttctgct gatgtgttct gggatctgca ggacccggca
      781 accgatgcag gtctgcttaa ccagaacgat atcaccacgc ttatccgcaa agacggtttc
      841 cgcttctggg gttcccgctg tctgagcgat gatccgctct ttgccttcga aaactacacc
      901 cgcacggcgc aggtgctgat ggacacgatg gcagaagcgc acatgtgggc ggtggacaaa
      961 ccgctgaacc cgtcgctggc ccgcgacatt atcgaaggta tccgcgccaa aatgcgtagc
     1021 ctggtcagtc agggctatct cattggtggt gattgctggc tggacgagtc ggtgaacgat
     1081 aaagacacgc tgaaagccgg gaaactcacc atcgattacg actacacgcc agtgccgcca
     1141 cttgaaaacc tgatgctgcg tcagcgcatc accgatcagt acctggtgaa tttctccagc
     1201 caggtcagcg cgtaagggga caacatggct ttaccacgca aattaaaaca cctgaacctg
     1261 tttaacgacg ggaacaactg gcaggggatc gttgagtcgc tgacgctgcc gaaattcacc
     1321 cgcaaatatg agaagtatcg cggcggcggt atgcccggag cggtggatgt ggatctggga
     1381 ctggatgaca gtgcactgga tacagaattt tccattggtg gtactgaact gctgctgttt
     1441 aagcagatgg gcaaagccac ggtggatggc atccagctgc gctttaccgg ctctattcag
     1501 cgtgatgata ccggggaagt gcaggccgtg gagcttgtgg tgcgtggacg tcacaaagaa
     1561 gtagattccg gcgagtggaa gacgggcgaa agcaacacta ccaaagtgac cagtaccaac
     1621 agctacgcga agctgaccat caatggtgag gtgctctatg aagtggacct gatcaacatg
     1681 gtggaaattg tggacggtgt ggacctgatg gaagcgcacc gcaacgccct cggcctctga
     1741 tgtatctgaa cggcgcggaa tgccgcgcca gaacctaatt tacaggacaa caaaatgagc
     1801 gataagcaga ctgaaaagac cattcaactg gatactccca tcatgcgcgg taaaacagaa
     1861 attaccgaaa ttgtgttgcg taaaccgcag tccggtgcgc tgcgcggcac acgcctgcag
     1921 gccattatgg atatggatgt gaacgcgatg atgaccgtga tcccccgcat ctccagtccg
     1981 gcactgactg cacaggaaat tgcagagatg gacccggcag atctcactgc catgtcggtt
     2041 gaggttgtca cttttttgtt gaagaagtcg gtgcttgccg gtttaccgac agcctgacgg
     2101 ttgacgatct ggtggctgat atcgccacca tctttcactg gccgccatcc gttactgacg
     2161 ttatgccgct gaccgaagtg ctggaatggc gggataaagc gattcagaga agcggggcca
     2221 gccatgagtg acaataacct gcgtctgcag gtgattctta atgcggttga caaactcacc
     2281 cgcccatttc gatccgcgca ggccagttca agagaactgg ctgctgctgt caaaaaatcc
     2341 cgcgatgcaa taaagcagct tgatcaggcc gggagcagtc tggacagctt ccgaaagctg
     2401 caggcagaaa atcagaaatt aggcgacagg ctgaactatg cccgccagcg tgcaaatttg
     2461 ctcagtcagg aactgggagc gatggggccg ccttcgcaac gtcaggttgt tgctctgggc
     2521 cgtcaacggc tggctgttca gcgcctggaa gaacgccaga aaaagctgca gcagcagacg
     2581 gcgcttgtgc gtgcagaact ttatcgtgct ggtatttcag ctaatgatgg cgccagtgcg
     2641 acggcccgca ttacccgtga aacgatgcgt tataacaggc agctttctga gcaggaagcg
     2701 aggttacgac gtgtcgggga gcaacagcga aaaatgcacg ccgcccgggg ggcttacgcc
     2761 aggcgtcttg aggtaaggga tcgtattgca ggtgccggag ccaccaccac ggctgcaggg
     2821 ctggcaatgg gcgcaccagt gatggcggca gtaaaaagct ataccagcat ggaagatgcc
     2881 atgaaaggtg tggcaaagca ggtcaatggt ctgcgtgacg ataatggcaa ccgcactgcg
     2941 cgtttttacg aaatgcaggg tgccatcaag gctgccagcg aacagttgcc gatggaaaac
     3001 ggtgctgtgg acttcgccgc actggttgaa ggtggtgcgc gcatgaacgt cgcaaaccct
     3061 gacgacagct gggaagacca gaaacgtgac ctgctggcct tcgccagcac ggcggcaaag
     3121 gcggcaacag cctttgaact gccagcggat gaactgtcag aaagtctggg gaaaatcgcc
     3181 cagctctaca aaatccctac ccgcaatatt gagcagctcg gtgatgcgct gaactatctg
     3241 gatgataacg ccatgtcgaa aggggcggac atcattgatg tcatgcaacg cctgggcggt
     3301 gtggctgacc gtctggatta tcgtaaagcg gcggcgctgg gttccacctt cctgacactc
     3361 ggcgctgcgc ctgaggttgc agccagtgca gcaaacgcga tggtgcgtga attgtccatt
     3421 gccaccatgc aaagcaagag tttctttgaa gggatgaatc tgctgaaact caatccagaa
     3481 gtgattgaaa agcagatgac gaaggatgcg atgggaacta tccagcgggt gctggagaag
     3541 gtgaatgcgc tgccacagga taagcgcctg tctgccatga ccatgttgtt tggtaaagag
     3601 tttggcgatg acgcagcgaa actggcaaac aacctgccgg aacttcagcg ccagttaaaa
     3661 ctgactgcgg gcaatgatgc gctcggttcc atgcagaaag aatccgacat caacaaggat
     3721 tcactttctg ctcagtggtt gctggtcaaa accggagcac agaacacctt cagcagcctg
     3781 ggggaaacgc tgcgccagcc gctgatggat attctgtaca cggtgaaaag cgtcacgggg
     3841 gcgttgcgtc gctgggtgga agctaacccg gaactgacgg gcactctgat gaaagtagcc
     3901 gctgtggtag ctgccgttac cgtgggcctc ggcaccttag cggtggcgct ggctgcagtg
     3961 ctggggccgc tggcagtcat ccgtctggga ttctctgtgc tgggtatcaa aacgttacct
     4021 tccgttacgg cagcagtaac ccgaaccagc aacgcgttgt cctggctggc tggcgcacca
     4081 ctggcactgc tgcgacgcgg gcttgcttca tcgggcaacg ctgcaggttt acttactgcg
     4141 ccgttgtcgt ctttgcgccg cacggcatca ctgacgggaa atgtcctgaa aactgtagca
     4201 ggtgcgccgg ttgcactttt gcggtctgga ttatccggtt tacgtgcggt tgctgtgatg
     4261 tttatgaatc cactggcggt actacgcggc ggactggctg ccacaggcac ggtgctgcgt
     4321 atgctcgcat ccggtccact ggcgatgctg cgcgttgccc tgtatgccgt ctctggtctg
     4381 ttaggtgctc tgctcagtct gataggtctt gtggttactg cactggcggg tgtggcgctg
     4441 gttgtctgga aatactggca gcccatcacc gcatttctcg gtggcgtggt ggaaggattc
     4501 aaagcggcgg caggtcctgt cagtgccgcg ttcgaaccgc ttaagcctgt gttccagtgg
     4561 attggcgaca aagtacaggc gctgtggggc tggtttactg atctgctgac gcccgttaag
     4621 tcgacctctg ccgaactgca gagtgcagcg gcaatggggc gacgattcgg ggaggctctg
     4681 gcggaagggc tgaatatggt catgcatccg ctggactccc tgaaatccgg cgtttcctgg
     4741 ttgctggaga aacttggcat tgtcagtaaa gaggccgcaa aggcgaaact gccggaaagc
     4801 gtgacgcgtc agcaacctgc gacggtgaat gcagacggta aagtgatgat gccatcgggt
     4861 ggttttccgt catggggata tggctttgcg gggatgtatg acagcggcgg gtatatcccg
     4921 cgcgggcagt ttggcatcgt cggtgaaaac gggccggaaa ttgttaacgg cccggcaaat
     4981 gtgaccagcc ggagaaatac agctgcactg gctgccgttg ttgccggaat gatgggtgtt
     5041 gctgctacgc cagtagagct tccaccgttg caccctttgg cacttcccgc gaaaggcggt
     5101 gaagcgatgg tgagtcgtgc agccactgtg ccgcccgttc aacggattga ggcaccgatg
     5161 cagatcatca ttcaaacgca gccaggacaa agtgcgcagg atattgcgcg ggaggtggcc
     5221 cgccagcttg atgaacgtga acgcaggctg aaggcaaaag ccaggagtaa ctacagcgat
     5281 caggggggat acgacgcatg atgatggtgc tgggattgta cgtgtttatg ctgcgcaccg
     5341 tgccgtatca ggagctgcag tatcaacgca gctggcgaca tgcggcaaac agccgggtaa
     5401 accgacgccc gtcaacgcag tttctgggac cggacaacga catgctgacg ctttctggtg
     5461 ttcttatgcc ggaggtaacg ggcggcaggc tgtcgttgct ggctctggag cagatggcag
     5521 aacagggaaa agcatggccc ctgattgaag gcagcggcac gatttacggc atgtatgtga
     5581 ttgagggact gaatcagact aaaacggagt ttttccgcga cggtatgccg cgccggattg
     5641 agttcaccct gtcgctaaaa cgcgtggatg aatccctgtc cgatatgttc ggtgatctca
     5701 gtgcgcaact gaataatctg cagggaacgg caacatctgc cttaagcgat atcagtaaaa
     5761 cggtgggagg gctgctgtcg tgaatttcag ctctgaactg cttaacaaag gcaacaaaac
     5821 tccggcattc agcatcagta ttgaaggcag ggatatcacc actgtgctgg acaaccgcct
     5881 gatggggctg acgctgacgg ataaccgggg ctttgaagcg gaccagcttg atctggagct
     5941 ggacgacgcc gatggaaaaa tcgtgctgcc gcgccgtggg gctgtcatta cgctggcgct
     6001 gggctggaag ggacagccgc ttttcccgaa aggggcattc acggtggacg agattgaaca
     6061 cactggcgca ccggatcgcc tgactatccg ggcgcgaagt gctgattttc gtgaaacgct
     6121 gaatacccgc cgtgaaaagt cgtggcacaa gaccaccgtt ggggaagtgg tgaaggaaat
     6181 agctgcgcgg cacaaactga agatggcatt gggtgaagac ttgtcggata aactcgtgga
     6241 gcatatagac cagactaatg agagtgacgg cagttttttg atgcggctgg cgcgccagta
     6301 cggtgctatt gcgtcggtga aaaatggcaa tctgttattc atccggcagg ggcagggtaa
     6361 aagcgccagc ggtaaaccac taccggtgat cactatcaca cgcaaggacg gcgacagtca
     6421 ccgctttacc ctggcagatc gcggagctta cacgggcgtc attgccagct ggttgcatac
     6481 ccgcgaaccc gcgaagaaag aaagcaccac ggtgaagcgt aagcgcagga ctaagaagca
     6541 gaagaaagag ccggaagcga agcagggcga ttacctggtg ggtacggatg aaaacgtgct
     6601 ggtacttaat cgcacttatg ccaaccggag caacgccgaa cgggcagcga aaatgcagtg
     6661 ggaacgcctg caacgcggcg ttgcatcatt ctcgctacaa ctggcggaag ggcgggcaga
     6721 tctctacaca gaaatgcctg tgaaggtcag tggctttaaa cagccgatag atgatgcgga
     6781 atggaccatt acgactctga cgcatactgt cagcccggat aacggtttta cgaccagtct
     6841 ggagcttgaa gtgaggattg atgatttcga aatggaatga ttcttcgcaa tggagaactt
     6901 ttaagcttgc aaaaatggaa taatgcggta tcattattgt gaatttagca aaaatgggga
     6961 gagctcgaaa aatgatgatt tgcccactgt gtggaagtgc cgcccatact cgcagcagtt
     7021 ttcaggtatc ttcattgacc aaagagcgtt acaaccagtg ccagaacatt aactgcagcc
     7081 atacttttgt tacccatgaa acttttgttc gttcgattgc aacgccaaaa gagtcaaatc
     7141 cggttcagcc gcatccaatg aaatcaggac aggtggcgct ctctctttga cgctgccgcc
     7201 attttgtcgc catcgttaaa aaacagtgct tctaacatca tgattttaaa aggcataaat
     7261 ttcagacaac aaaaaaccca tcaaccttga accgaaatgg cggggttgat gggctccaca
     7321 aaatggggac atcaaagaaa agcagtggca ctaattaaga ctgatgccct gcggaaaagt
     7381 tctgcggttg tgcaaaaaaa tttcattttc agggcaactt cagttttatc ctaatcctgg
     7441 ccataccatg acgatgattg tccctgccag cgtcagcagg acgttggcga ttgcgtaggt
     7501 gcccgcatag cccagcgcag ggatgttact gcgagctgta tcactgatga tctccattgc
     7561 cggcgcgcag gtgcgtgcgc ccatcattgc gccgaacaac agtgcgcggt tcattcgcaa
     7621 tacataagca ccgaacaaga aacagataac cacgggcaca agactgacaa ttaatccggc
     7681 aatcaacatc tgaccgccaa tcgcgcccag gccgttatta ataccgctac cggcgctcag
     7741 accaacgcct gccataaaca ccatcaagcc gaactctttc accatgctta atgcaccttg
     7801 cggaatgtaa ccgaaggtcg ggtggttagc acgcataaag cccagcataa ttccggcgaa
     7861 taacaacccg gcagcgttcc ccatgccgaa actgaatgtg ctgaactgga aggtgatcat
     7921 cccgatcatc agcccaataa caaagaaggc gcaaaatgcc agcaggtcag tgacctggct
     7981 gtgaatcgag ataaagccga tgcgatcggc gatggttttt acgcgacggg catcaccgct
     8041 gacttgtaaa acgtcacctt tgttaagcac gacgttgtca tctatcggca tctcaatctg
     8101 gctacgaatg acgcggttaa ggaagcaacc gtgatcggtc aacttcagtt gtgcgagacg
     8161 tttacctaca gcgttatggt ttttaacgac cacttcttca gtgacgatac gcatgtcgag
     8221 aaggtcacga tcgaaaactt ctttaccgtt acggaagctg ggatcgagtc gggcatgggc
     8281 gtcgggatag cctaccaacg ctatttcatc gcccatttgt agcacggcat caccgtctgg
     8341 atttgccaga atcccgttac gtcgaatacg ttcaatgtag cagccggttt gtcgataaat
     8401 acccagttca cgcagatttt tgccgtcggt ccaggccacc agctccgggc cgacgcgata
     8461 ggcgcggatc accggtaaat aaaccttacg gttggcatca gtgtccaggc cacgttcgcg
     8521 ggcgatttgc tgggcgctgg tctgtaagtc ctgatgctgc aatttcggca agtaacgcgc
     8581 accaacaatc aaactcacca gaccgattaa ataggttaag gcatacccga ggctcagatt
     8641 atccagtgcc agtgagagct gcctgctttc catgccggaa tgacgcagtg tatcgccagc
     8701 accgaccaga accggtgtcg acgtcataga gcctgctaac ataccggccg tcaggccaat
     8761 atcccagcca aacagcttac ctaaccctaa ggcgatcacc agcgcactgc caaccatcac
     8821 cagtgctaac attaggtaat ttttcccatc gcgaaaaaaa atggaaaaaa agttcggtcc
     8881 ggcttcgacc ccgacgcaga aaataaacag cataaagcca agattaagcg catcggtgtt
     8941 aatgctgaaa tgttgttggc ctaataacag cgatacgact aaaacgccaa tggaattacc
     9001 cagttggatc gaaccaagtc gtaactttcc gagacatagc ccaagcgcga ggaccacaaa
     9061 taataacaga atgtaattcc catttaacaa ttcggcgacg tttatattca cggaggctaa
     9121 cttcttgttt actagtaagc tgttgaaaga aatggtaatt tacgataatg ttttttacca
     9181 gaattcaggg cgcagattca ttcagcgcac ctaaacgata gtaaagtaac aatatatttt
     9241 actagtgtaa tcacattagg tatcaacggc tatatgaatt gcgttggcct atattagcat
     9301 ggaatgcgaa gcggctttat cttactgaac gccacactgg cgaaaaatgt gttcgataga
     9361 cgcagtgtca ggaggaacga gtgaaacata aacaacgttg ggcgggggca atctgctgtt
     9421 ttgtcctctt cattgtggtg tgcctttttc tggcgacgca catgaaaggc gcttttcggg
     9481 ctgccgggca tcctgaaatc ggcttgctgt ttttcattct tcctggagca gttgccagtt
     9541 tcttttcaca gcgtagagaa gtcctgaaac ctctatttgg cgcaatgctg gcggcaccct
     9601 gttcaatgct cattatgcgg ctgttttttt caccgacgcg ctcattctgg caagagctgg
     9661 catggttact aagcgcggtg ttctggtgtg cgctgggggc actgtgtttc ttatttatca
     9721 gtagtttgtt taaaccacag cacagaaaaa atcagtaaag ccctcaacgc gagggcttgt
     9781 cagacgatca ggcgtccaga ttttctttca cccatgcagc aaaatcggta tagccgccga
     9841 tatgttgctg atcgacaaaa atctgcggca cggtttctac gggtttacct gccttttgtt
     9901 gtagatcttc tttagtgatc ccttccgcac gaatatctac atactgatac tgaaaatcat
     9961 cgcgttcatt gctcaatttc tcagccagat cttttgcacg cacacagtaa gggcaagccg
    10021 aacgaccaaa aataacggtt tgcattattt ctctcctcat agatttatgc ctgtaatgat
    10081 cacgctaaaa tgtattcgct gaaagtaggt ttaacctgtt gcattaattg ctaaaagcta
    10141 taactgttaa acacaataca gtgaaaagtt ttagactgaa ggctcacttt gcagagggaa
    10201 gcgtatgcgc gcgatcggta aattgcctaa aggcgtgttg atactggaat ttatcggaat
    10261 gatgctactg gcggtggcgc tgctgtcggt aagcgactcc ctgtcgctgc ctgagccatt
    10321 ttctcggcca gaagtgcaga ttctgatgat ttttctcggt gttttgctca tgcttcccgc
    10381 tgcggtggtg gttattcttc aggtggcaaa acgtcttgcc ccacagctga tgaaccgtcc
    10441 accgcaatat tcacgttcag aaagagaaaa agataatgac gccaaccatt gaacttattt
    10501 gtggccatcg ctccattcgc catttcactg atgaacccat ttccgaagcg cagtgtgagg
    10561 cgattattaa cagcgcccgt gcgacgtcca gttccagttt tttgcagtgt agtagcatta
    10621 ttcgcattac cgacaaagca ttacgtgaag aactggtgac gctgaccggc gggcaaaaac
    10681 acgtagcgca agcggcggag ttctgggtgt tctgtgccga ctttaaccgc catttacaga
    10741 tctgtccgga tgctcagctc ggcctggcgg aacaactgtt gctcggtgtc gttgatacgg
    10801 caatgatggc gcagaatgca ttaaccgcag cggaatcgct gggattgggc ggggtatata
    10861 tctgcggcct gcgcaataat attgaagcgg tgacgaaact gctgaaatta ccgcagcatg
    10921 ttctgccgct gtttgggctg tgccttggct ggcctgcgga taatccggat ctcaagccgc
    10981 gtttaccggc ctccattttg gtgcatgaaa acagctatca accgctggat aaagacgcac
    11041 tggcgcagta tgacgagcaa ctggcggaat attacctcac ccgtggcagc aataatcgcc
    11101 gggatacctg gagcgatcat atccgccgaa caatcattaa agaaagccgc ccatttattc
    11161 tggattattt gcacaaacag ggttgggcga cgcgctaaaa ccgccacgtc gatgtatgat
    11221 acgcgggctt ttgaccaggt ctgacagaga ggtgcagggt gaaaattgcc atattgtccc
    11281 gggatggaac gctctattcg tgtaagcggc tgcgtgaagc cgctatacag cgcggtcacc
    11341 tggttgaaat tcttgatccg ctttcttgct acatgaacat aaatcctgcg gcgtcttcta
    11401 ttcactacaa aggccgcaag ttaccccatt ttgacgcagt gatcccgcgt attggcaccg
    11461 ccattacctt ttatgggacg gcggcactgc gccagttcga gatgctgggg agctatccgc
    11521 tcaatgagtc ggtcgccatt gcccgggcgc gtgacaaatt gcgttccatg caactgctgg
    11581 cgcgtcaggg catcgacctg cctgtcacgg gcattgcgca ttcgccggat gataccagcg
    11641 atttaatcga catggtcggt ggtgcgccgc tggtggtcaa gttggttgaa ggcacgcagg
    11701 gaattggcgt cgtgctggcg gagacgcgtc aggcggcgga aagcgtgatt gacgctttcc
    11761 gcggtctgaa cgcgcatatt ctggtgcagg aatatatcaa agaggcgcaa gggtgcgata
    11821 tccgctgtct ggttgttggc gatgaagtgg tcgctgcgat tgaacggcgg gcgaaagagg
    11881 gcgattttcg ttccaatttg catcgtggcg gcgcggcaag cgtcgccagt atcacaccac
    11941 aggagcgtga aatcgcgata aaagccgcgc gaacgatggc gctggacgtt gctggtgtgg
    12001 atattctgcg tgctaatcgc gggccgttgg tgatggaagt gaatgcgtcg ccggggctgg
    12061 aaggaataga aaaaaccact ggtatcgaca tcgcgggtaa aatgatccgc tggatcgaac
    12121 gctacgctac gacagaatat tgcctgaaaa cgggtggtta gtcgcaatca cattactgat
    12181 catggttttg cctgcgcttt ttgcgtaagc tgtgccggtc tttttatcga aagaggttgt
    12241 acaaaattat gacatcgctg gtcgttcctg gtctggatac gctgcgtcaa tggctcgatg
    12301 acctggggat gagttttttt gaatgtgata actgtcaggc tctgcatctg ccccatatgc
    12361 agaatttcga cggtgtcttt gatgccaaaa tcgatctgat cgataacacg atcctgtttt
    12421 ctgccatggc ggaagtccga ccttcagccg tattgccgct ggcggcggat ttatctgcca
    12481 tcaatgccag ttcgctgacc gtgaaagcat ttcttgatat gcaggatgat aatctgccaa
    12541 agctggtggt ttgccagtct ttatccgtta tgcagggcgt aacctacgag cagtttgcat
    12601 ggtttgtgcg tcagagcgaa gagcagattt cgatggtcat tcttgaagct aatgcccatc
    12661 aactgctgtt accgactgac gatgaagggc aaaacaacgt taccgaaaac tatttcctcc
    12721 actgataact cctttcgagc acgcagtcgc tggtgcagtg actgcgcact gcaaaattat
    12781 ctgctgtttt taaccttttc ttaaagatta tttcacttct cttgtgccga tttggcttta
    12841 tcacatagag caaatacgca taacaatttg ttaaataccg ttttttaatc cgagctatag
    12901 tctcaaaccc tggctaaagt tattcttgcg atgcttttat atagcgagca gtgctggccg
    12961 ggagagagtt ctcttttctt acaccgcgcc gataaaaaat atgcacgttt attgcatatc
    13021 ttttagtatg acaacttttg ttcgtttgtt aacgaacttt cagaaggaaa gagatatgac
    13081 cgccttaaat aaaaaatggc tttcgggtct ggttgcgggt gctctgatgg ccgtctctgt
    13141 cggcacgctc gcggctgaac aaaaaacact ccacatttat aactggtctg attatatcgc
    13201 ccctgacacg gtggccaatt ttgaaaaaga aaccggtatt aaagtcgtct acgatgtttt
    13261 cgactctaac gaagtactgg aaggcaaatt aatggcgggt agcaccggct ttgacttggt
    13321 ggttccatct gccagctttc ttgaacgcca gttgactgcg ggagttttcc agccgctgga
    13381 caaaagcaaa ttgccggagt ggaagaatct cgacccggag ctgctgaagc tggtcgccaa
    13441 acacgatccc gacaataaat ttgctatgcc ctatatgtgg gcgacgaccg ggattggcta
    13501 taacgttgat aaagttaaag ctgtgctggg cgaaaacgcg cccgtcgata gctgggactt
    13561 gatcctcaaa cctgaaaatc tggaaaaact gaaaagctgc ggtgtctctt tcctggatgc
    13621 gccagaagaa gtttttgcta ccgtgttgaa ttatctcggc aaagatccca acagcactaa
    13681 agcggatgat tacaccggac cggcaaccga tctgctgtta aagctgcgcc cgaacattcg
    13741 ttatttccat tcatctcaat acattaacga cctggcaaac ggcgatattt gcgtcgctat
    13801 cggctgggca ggtgatgtct ggcaggcgtc aaaccgcgcg aaggaagcga agaatggagt
    13861 gaatgtctcg ttctcgattc caaaagaagg ggcgatggcg ttctttgatg tattcgccat
    13921 gcctgcggat gccaaaaaca aagacgaagc ctatcagttc ctgaattacc tgctgcgccc
    13981 ggatgtagta gcgcatattt ccgaccatgt gttctatgcc aacgccaata aagcagccac
    14041 gccgctggtg agtgcggaag tccgtgagaa cccgggtatt tatcctccgg cggacgttcg
    14101 tgcgaagcta ttcactctga aagtacagga tccgaaaatc gaccgtgtgc gcacccgcgc
    14161 gtggaccaaa gtgaagagcg gaaaataatc cgcagcctta gatgccgggc gggcgcacca
    14221 cacccgccgg caattcgcac catcatggtg cgcttgcaca cattcaatgc cggagagcag
    14281 ccgtgaatga cgctatccct cgcccgcagg cgaaaacccg taaggcgctg acgccgctat
    14341 tagaaatccg caacctcacc aaatcctacg atggtcagca tgcggtcgat gatgtcagcc
    14401 tgaccatcta caaaggtgaa atcttcgcgc tgctgggcgc ttccggctgt ggcaagtcca
    14461 cgctgctgcg tatgctggca ggttttgaac aaccttctgc cgggcagata atgctcgatg
    14521 gcgtcgattt gtcacaggtg ccgccttacc tgcgccccat caatatgatg tttcagtctt
    14581 acgcgctgtt tccgcatatg accgtggaac agaacatcgc ttttggcctg aaacaggaca
    14641 aactaccgaa agcggaaatt gccagtcggg tccatgagat gctcggcctg gtgcacatgc
    14701 aggagttcgc caaacgcaaa ccgcatcagc tttccggtgg tcagcgacag cgtgtggcgc
    14761 tggcccgaag ccttgccaag cgcccgaaac tattactgct cgacgagccg atgggcgcgc
    14821 tggataaaaa gctgcgtgac cggatgcagc ttgaagtggt ggatattctg gagcgtgtcg
    14881 gcgtgacctg tgtgatggtc actcacgatc aggaagaggc gatgacgatg gcgggacgta
    14941 tcgccattat gaatcgcggg aaatttgtcc agattggcga gccagaagag atctacgaac
    15001 atccaaccac ccgctacagt gctgaattta tcggttcggt taatgtcttt gaaggtgtac
    15061 tcaaagagcg tcatgaggat gggcttgtgc tttattcgcc tgggctggtg catccactga
    15121 aagtcgacgc ggatgcctcg gtggtcgata acgtgccggt acatgtggcg ctgcgcccgg
    15181 aaaaaatcat gctttgcgaa gagccgcccg ccaatggttg taacttcgcg gtgggggagg
    15241 tgatacacat tgcctatctc ggcgatcttt cggtgtatca cgttcgtctg aaaagtgggc
    15301 agatgattag cgcccagcta caaaacgctc atcgtcatcg taaagggtta ccgacctggg
    15361 gcgacgaagt gcgtttgtgc tgggaagtgg acagctgtgt ggtgctgacg gtttaaggag
    15421 caaagatgaa tacacttgaa cctgctgccc agtcgaaacc gccgggcgga tttaagctgt
    15481 ggttgtcgca gctgcaaatg aagcatgggc gcaaactggt cattgcgttg ccatatatct
    15541 ggttgatctt gctgtttctg ctgccatttc tgattgtctt taaaataagc ctggcggaga
    15601 tggcgcgcgc tattccacct tataccgaac tgatggagtg ggctgacggg caactgtcca
    15661 tcactcttaa tctcggtaat tttctgcaac tgaccgacga tccgctatat ttcgatgctt
    15721 atctccagtc gctacaggtg gctgcgattt cgacattttg ctgtttactg atcggctatc
    15781 cgctggcgtg ggcggtggcg cacagtaagc cttcgacccg taatatttta ttactactgg
    15841 tgatcctgcc gtcgtggacc tcgtttctga tccgcgttta tgcctggatg ggaatattaa
    15901 aaaacaacgg tgtactgaat aattttctgc tgtggctggg ggttatcgat caaccgctga
    15961 ccattcttca taccaatctg gcagtttata ttggcattgt ttacgcctac gtgccgttta
    16021 tggtgctgcc gatttatacc gcgttgattc gtattgatta ttcgctagtg gaagcagcgc
    16081 tggatctcgg tgcacgaccg ctgaaaacgt tctttactgt gatcgtgccg ctgactaaag
    16141 gtgggattat tgccggatcg atgctggtgt ttatcccggc tgtgggcgag tttgtgatcc
    16201 cggaactgct cggtggcccg gacagcatca tgatcgggcg cgtgctatgg caagagtttt
    16261 tcaataaccg cgactggccg gtggccgcgg cggtagcgat catcatgttg ctgctgctaa
    16321 ttgtgccgat aatgtggttc cacaaacacc agcaaaaaag cgtgggagaa cacggatgaa
    16381 taatttaccg gtagttcgtt cgccctggcg gattgtgatt ttgctgctgg gctttacctt
    16441 tctctacgcg ccaatgctga tgctggttat ctattcgttt aacagctcga agctggtgac
    16501 ggtgtgggcc ggctggtcaa cgcgctggta tggtgagtta ttgcgcgatg acgcgatgat
    16561 gagtgcggtt ggtttaagcc tgacaattgc tgcctgtgcg gcaacggcgg cggcgatcct
    16621 cgggactatt gcggcggtgg tgctggtgcg ctttggcagg tttcgcggat caaatggctt
    16681 tgcctttatg atcaccgcgc cgctggtaat gccagatgtc atcacgggct tgtcgctgtt
    16741 gttattattc gtcgcgcttg ctcatgccat tggctggcct gcggaccgcg gtatgcttac
    16801 catctggctg gcgcatgtca ctttctgtac ggcttatgtg gcggtcgtta tttcgtcgcg
    16861 tctgcgggaa ctggatcgct cgatagaaga agcagcgatg gatctcggtg cgacgccgct
    16921 gaaagtgttt ttcgtcatta cgctaccgat gatcatgcct gcgatcattt ctggctggtt
    16981 actggctttt actttgtcgc ttgatgatct ggtgatcgcc agctttgttt ccgggccggg
    17041 agccaccacg ttaccgatgc tggtcttttc cagcgtgcgg atgggggtga atccggaaat
    17101 caacgccctt gcaacgttaa ttctcggtgc ggtcggaatt gtcggattta tcgcctggta
    17161 tctgatggct cgcgcagaaa aacagcggat acgcgatatc cagcgtgcaa gacatggctg
    17221 aagacactaa aatttgccaa cctggctaca taatgccgcg catgccgcgg cattgttttc
    17281 atggaagacg aaacgttggg attttttaag aaaacatctt catctcatgc tcgcctgaat
    17341 gtgcctgcgc tggtgcaggt agcggcgctc gccattatta tgatccgtgg cctcgacgtg
    17401 ctgatgattt tcaatacgct gggcgtgcgc ggtattggcg agttcattca tcgcagcgta
    17461 caaacctgga gcttaacgct ggtattttta agcagtctgg tgctggtttt tatcgagatc
    17521 tggtgtgcgt tttcactggt gaaagggcgt cgctgggcgc gctggctata tctgctgaca
    17581 caaatcaccg ccgcaagtta cttgtgggcg gcttcgctgg ggtatggtta tccggagctg
    17641 ttcagcattc ccggtgaatc aaaacgtgaa atcttccata gcctgatgct gcagaagctg
    17701 ccggatatgc tcatcctgat gctgctgttc gttccctcga ccagtcggcg gttcttccag
    17761 ttgcaataat gtgtataatc gtcgcccctg atgatgtgaa ggtcaatgta tgcagtgcgc
    17821 actttacgac gcgggtcgct gtcgttcctg tcagtggata acgcagctga ttccagagca
    17881 actctccgct aaaaccgccg atcttaaaaa tctgctcgcc gattttccgg ttgaggaatg
    17941 gtgcgcgccg gtgtcaggcc cggaacaagg gtttcgtaat aaagccaaaa tggtggtgag
    18001 tggtagcgtt gaaaaaccac tgctcggtat gctgcatcgc gatggcacgc cggaagacct
    18061 ttgtgactgc ccgctttatc ctgcctcttt tgcgcccgtt tttgcggcgc taaaaccgtt
    18121 tatcgcctgt gcggggttaa cgccctacaa cgtggcgcgt aagcgtggcg aactgaaata
    18181 cattctgctg actgaaagcc agagcgatgg cggcatgatg ctgcgctttg tactgcgttc
    18241 tgaaaccaaa ctggcacaac tgcgtaaggc gctgccgtgg ttacaggaac aactaccgca
    18301 actgaaagtt attaccgtca atattcagcc ggtacatatg gcgattatgg aaggggagac
    18361 ggagatctac ctgactgaac aacaggcgct ggcagagcgt tttaatgacg taccgctgtg
    18421 gatccgtccg caaagtttct tccagactaa tccggcggtc gccagccagc tgtacgctac
    18481 cgcgcgcgac tgggtacggc agctgccagt taaacatatg tgggatctgt tctgcggtgt
    18541 ggggggcttt ggtttacact gcgcgacgcc tgacatgcag ttaaccggga tcgaaattgc
    18601 gccagaggcc attgcctgtg caaagcagtc agccgctgaa ctgggcttaa ctcgtttaca
    18661 atttcaggcg ctggactcca ctcagtttgc cactgctcag ggggaggtgc aggagctggt
    18721 gctggttaac ccgccgcgcc gcggcattgg taaaccgctg tgtgattatc tctcaacgat
    18781 ggcaccgcgt tttatcatct actccagctg taacgcccaa actatggcga aagatatccg
    18841 cgaactgcct gggtttcgca tcgaacgggt acagcttttt gatatgttcc cgcacaccgc
    18901 gcactatgaa gtgctgacgc tgctggtgaa gcaataaaaa agccgcaggt gcggcttcag
    18961 attgctgatc aggtgcgctt tgttcatgcc ggatgcggcg tgtacgcctt atccggccta
    19021 caaaatcatg ctaaatcaat acattgcaga gttgatgtgg gccagataag cgcagcgcat
    19081 caggcaatct tacttttgtc atcagtctca attactgcgg gaaccactgg tcattgattt
    19141 tctgatatgt accgtcagct ttaattgctg ccagcgcgtt attcagtttt tccagcagag
    19201 ctttgttatc cggacgtaca gcgatgccca gaccggtgcc gaagtattgc ggatcggtca
    19261 ctttttcagt agcaacgccc agttgcggat tggttttcag ccattcgttt accaccgctg
    19321 tgtcaccaaa taccccatca atacgaccat ttttcagatc gataaaggca ttctgataac
    19381 tgtcatagga gacagttttc acttcggggt gctgatcctg aatatatttc tggtgcgtgg
    19441 tgccgttttc catcccaata cgtttgcctt tcagatcggc aaacgctttg taggtatctt
    19501 ttttggcaat cacgacggct gagttttcat agtagggcgt ggtaaacgat acctgcttgc
    19561 tacgctcggg cgtgatatcc ataccggaga ttacggcgtc atattttctg aatttcagtg
    19621 acgggatcag gctgtcgaac gcgtgattag taaaagtaca ttctgcctgc atttgtttgc
    19681 acaaggcttt tgccagatcg atatcaaagc cgacaatctc attattagca cctatagatt
    19741 caaagggtgg ataggtggct gaaacgccaa aattgatttt ctctgcggca gaagcaccga
    19801 aagtaaagga agcaagtaaa gcggcaagaa ctaacttttt catgatggaa ctcccgtctg
    19861 tcaatcttat gatttttggc cgtgtctgcg gcatgggata acaatgccat caagtgaatt
    19921 tatatgcaat aaatatgatt aaataattta aatgaaataa aaaaagacgg ataacttagt
    19981 gagttgtccg tcttcattat aagaatttat gcactatgta ggccggataa ggcgtccacg
    20041 ccgcatccgg cacaggcacc gtgctgatgt ctgatgcgac gctggcgcgt cttatcagac
    20101 ctacaaaccc cccggcgaat gtacgcagct acattaattc cgccgttcga atgccagtgc
    20161 tttgcgctcg atcagacgca tcatcagcgt cagcaggccg ttgacgacca ggtaaataat
    20221 ccctgccgca ccgaacacca ttacatcgta ggtgcgtccg tacaacaact ggctgtatcc
    20281 catcacttcc atcagcgtaa tggtgtaagc cagagaggta cttttgaaca ccagcaccac
    20341 ttcgttggaa taagaagaga gcgagcgttt aaaggcatac ggcagcagga tcgccagcgt
    20401 atcttttttg ctcattccca gggcgctaca ggactgccac tgaccttctg ggatcgcacg
    20461 aattgcaccg taaaacagct gcgtggtata cgccgcactg ttcagcgata acgcaatcag
    20521 cgcacataac cacggttctg acaacaaatg ccacagtgcc ggatactcct gcaaagtcgg
    20581 aaactggccc ggcccgtaat aaatcaggaa gatctgcacc agcagcggcg taccggtaaa
    20641 cagcgtgata taaccccgca ccagccacac cagcaccggc gttttcagcg tcaggatgat
    20701 ggtaaaaatc aatgccagaa tcagtgccac aatcagcgag gcaacggtta gcgtcaggct
    20761 ggtgtgtagc cctttcatca gttcgggtaa atactcaaac attagctggg cctccgctca
    20821 aaacgtgtcg cgcgcaggtc aatgcgtttg agaatgtact gactgagcag ggtgatcacc
    20881 aggtaaatcg ccgccgccac aatgtaccag gtaaatggtt cctgggtacg agtagcgatg
    20941 ctttttgttt gcagcattaa atcattcaca ctaatcaaac tgaccagcgc ggtatctttc
    21001 agcagcacca gccactggtt accgaggcca ggcagcgcat gacgccacat ctgcggcatc
    21061 accagacgga aaaagatagc cgatttcgac agccccagcg cctgaccaga ctcccactga
    21121 cccaccggca ccgctttcaa cgcgccccga agcgtttgcg aggcataggc ggcatacagc
    21181 agtgacagag cgatgacacc acaaaggaac gggctaacgt cgaagttctc aatgtccatc
    21241 tgcactggga tctgcacgaa cccaagattg atagtgaagc catccgaaag cgtcagcagc
    21301 agctgcgagg agccaaaata gataaacagc accaccagaa tttctggcag gccacgcaga
    21361 atggttacca gcgctgaacc tgcccacgcg acaggacgcc atttttccga ctcccatacc
    21421 gcaaagaaca tcgccagcgc cagcccgaca atcaatgcac aaacggcaag gccgacggtc
    21481 atcccggcgg cgcttgctaa aggaaaaaat tcattcatca ggaattactt ctggaaccat
    21541 ttgttgtaga tggtttcgta agtgccatct ttcttcactt tttccagcgc agtgttgagt
    21601 ttctgctgca gctcagtgtt gccctgacgt accgcgatgc cgaggccagt gccgaagtaa
    21661 tctttatcgg tcactttgtc gcccaccgcc gccagtttcg ggttatcttt cagccactca
    21721 gtgaccactg cggtgtcacc gaagacgccg tcgatacgcc cgttttgcag atccagtttt
    21781 gcgttctggt agctgtcata cggaacggta gtgatttccg ggtgcttatc cataatgaat
    21841 ttctggtgtg tcgtcccgtt ctgtacgccg acttttttgc ctttcagctg atcaacactg
    21901 gtgtatttgc cttgctgacc cacaaacagg gcagagttgt catagtacgg ggtggtaaac
    21961 agcacctgct tttcacgctc cggagtgata tccatgcccg ccatcacggc ttctacgcga
    22021 cggaatttca ggcttgggat caggctgtca aacgcctggt tagagaaagt gcaggttgca
    22081 tcaatctctt tacacagcgc ttgtgccagg tcgacgtcaa aaccaacgat ctggttgttt
    22141 gcatcaatcg attcaaacgg aggataggat gcttcggtag caaaacgaat ggtttcggca
    22201 gctgtggcgg aaagactaaa acctgcaatt aacgcggcaa tcagaacttt tttcattgtt
    22261 gttatcccga atcttagtga gagagatagt ttttaaatgc ttcggtttgc ggctcggtaa
    22321 agcagctcgc gtcgccttgt tctacgatat gaccattttc catatacacc actcggctgg
    22381 cggttttacg cgccacttca acttcgtggg tgacgatcac ctgggtaata ttcgtttctg
    22441 ccagctcacg aatgatgctg acgatttgtg ccgtaatttc cgggtccagt gcggcggtcg
    22501 gttcatcgaa cagcagtacc tgcggttcca tcatcaacgc acgggcaata gcaacacgct
    22561 gctgctgacc accagaaaga tgcagcgggt aacgatcgct ataaggtttg agacgcagac
    22621 gttccagcag tttttctgca cgggccagcg cctgatcttt actcaacccc agtacacggc
    22681 agggcgcttc aatcaggttt tgctgcacgg tcagatgcgg ccacaggttg tattgctgaa
    22741 acaccatgcc aacgttacga cgcaaatcgc gaatcgcttt gtcagagggt gttttggtga
    22801 aatcgaaatg gttgcctgca atgttgagcg taccggagcg cggcatctca agcagattga
    22861 gtacacgcag cagcgagctt ttacccgcgc cgctggggcc aagtaacacc agcgtttcgc
    22921 cctgtgggca atccagcgtg atatcgaaca gcgcctgatg cgcgccgtag aagcaattaa
    22981 tgccgtttaa ttgaatactc attgacactc gtatactggc agtctgatag ctattgaggt
    23041 cgaagatagt acctttgaca gaataattat gcaatatttc tgctttaaaa gttaaaagca
    23101 aagcgcatta ttcaataaac atagcacaaa ataacggggg cggtggtcgg cgagcataaa
    23161 tgtcggcatt cctcacgaaa tgccggacaa tttacggggt ttattggttg atcaaggtgt
    23221 tagcgattct cgatggactg acggagcgta cccgccgtgg catgaacgct gccgcctaag
    23281 tagcgtacat cgtcgatcac ccaacactgg ccttcctgaa tcattaacac ttcatcctgc
    23341 cagctctgat caccctgttt tagatccaca cgcagaggaa tatttcgcgc atcacgattc
    23401 gggattgttg aggcactggc aacacgggcg ctctctggca aggttgtgcg actggagaat
    23461 ggatcgttgg tcagtagttc ccgatggtta ttatcccggg aggcatcgct aagcagtgtc
    23521 gccagtttgt cgctcagata agggcgcaag gcggtgatgt cgttgctgcg gtgcaaaatg
    23581 cggtagtcat aaaattgctg ggccacgtta cccgggcctc cttcaacgca aggaccactg
    23641 cgtgtgccgt tatctttata agctggagtg actgtggtgc aggcactgag gagcagtgcg
    23701 caggggataa gcattgtcaa tttgctgtag cgcataatga tttccttata agcgatcgct
    23761 ctgaaagcgt tctacgataa taatgatatc ctttcaataa tagcgtatca gtctgataat
    23821 gcttttgaga tcgaaggctt agcaaacaag gagatcgatc atgcaatttt ctacaacccc
    23881 aactctggaa ggccagacca tcgttgaata ttgcggtgtg gtgaccggcg aagcgatttt
    23941 aggtgccaat attttccgtg atttctttgc cggtatccgc gatatcgttg gcggacgttc
    24001 cggtgcgtat gaaaaagaac tgcgtaaagc acgggagatc gcctttgagg aattaggctc
    24061 ccaggcgcgg gcgctggggg ccgatgccgt cgtcggtatt gatatcgact acgaaacggt
    24121 cgggcaaaac ggcagtatgc tgatggttag cgtcagcggt acggcggtga aaacgcgtcg
    24181 atgagaagag tcttctggct ggtcgctgcc gctctgttat tggcagggtg tgcaggcgaa
    24241 aaaggcattg tcgagaaaga gggatatcag cttgataccc gacgccaggc gcaggcggcg
    24301 tatccgcgca ttaaagtgct ggtgatccac tacaccgcag atgattttga tagctcgctg
    24361 gcgacactga ccgataagca ggtcagctcg cattatctgg tccctgcggt accaccgcga
    24421 tacaacggta aaccgcgcat ctggcaactg gtgccggaac aagaactggc ctggcatgcg
    24481 gggattagcg cctggcgcgg ggcaacgcgc cttaacgaca cctctattgg cattgagctg
    24541 gaaaaccgtg gctggcaaaa atcggccgga gtgaaatatt ttgccccgtt tgaaccggca
    24601 cagattcagg cgcttattcc actggcgaaa gatattattg cccgttatca catcaagccg
    24661 gaaaacgtag tggcacatgc ggatatcgca ccgcagcgca aagacgatcc ggggccatta
    24721 tttccctggc agcaactggc gcagcagggg attggtgcct ggccggatgc gcagcgggtt
    24781 aacttttacc ttgccgggcg cgcgccgcac acaccggtag ataccgcgtc attgctggag
    24841 cttttggcgc gctacggtta tgacgttaaa cctgatatga caccgcgcga gcagcggcgc
    24901 gtgattatgg cattccagat gcatttccgc ccgacgttat ataacggcga agcggatgca
    24961 gaaactcagg cgattgccga agcattgctg gagaaatacg ggcaggatta gcgcggcagt
    25021 tttccgtggt cgcgtagcca ggcggcagtt ttctcgatac cttcatccag ggtgatgacc
    25081 ggctgataac ctaactcttc ctgcgcacgc gtaatatcca gcgtaaagtc aaaattcaac
    25141 ttggagacgc cgtagtgggt cagcggcggc tcttttgctg acttgcggcc taaacgctcc
    25201 atgctgcggg cgatcatatc cagcatcggg taggggacgg aacgaatacg acagtcaata
    25261 ttcaactcgt cgatcagctt ctgcacgatg ctgcacagtg tgcgatgctc gccgttggtg
    25321 atgttgtaca cacgcccgga aggtagctta tcgcaggctt cctggcttgc cagccacatt
    25381 gcgtgcacgg cattttcata gtaggtcata tcgaccagcg cactgccgcc atgcggtaac
    25441 agaatactgc cgtagtggtg catcatatgc gccagacggg gaataaagac tttatcgtgc
    25501 ggtccgaaca gactttgtgg gcgcagaata gtaaagcgcg tttgtggatt cgcctgcgaa
    25561 aacatattga tcacttcttc gctggctgct ttgctgcggg caaactcgtt ggcgaagcgg
    25621 tgagggcgaa aatcttcttt aatatcgcga tggtggtgat aatcgaagta cagggagggg
    25681 gaagagatat gaataaagtt acgcacaccc caggcgacag cccattcacc caggcggcga
    25741 gtggcgcgaa cgttagccag atcgaaagcc tgttgtgtcc cccagggtga ggtaaagctg
    25801 gagcagtgcc acagcgtatc aatgcccgcg agcatcactt tagcttgtga tgaaaccagc
    25861 tcggtcagat ccgccggaac aaactctgcg cccatttttt ccagcaattt gcccattgcc
    25921 tcgttgcgac cggtcgctcg cacgctgatg cctttctggc ataaaaactc taccgcgttt
    25981 cgacctaagc cgctggtggc gccggtaacc agtaccttca tatcaatcca ctgttgttga
    26041 gaaaataacg tgcgcattct tccgtgattt cccccatgat gcaatgggaa acatgaaaga
    26101 ataacgcagg ttttgtcgat taatctgtgc tttgttctgc cagtctggcg atttgttttg
    26161 ccattccgcg aaaaataaac agatgcgcgg ggatcatcaa taaccagtaa aacagccccg
    26221 gcataccgtg cggatgccag aaagcgcgga catcgatagt acgatagtcg cctttatctt
    26281 ccaggctaaa acacagtcgt cccagccccg gcgctttcat gccaaataac aacgtaagtt
    26341 gtttttccgg ttcaacgaca atcactttcc agctatctac cgcatcgcca gtctgtaaat
    26401 attcgcgctc cgggcggcct ttcgccagct tatgaccgat cgcgcggtcc atcaacgccc
    26461 gtgtctgcca caaaatattg ccaaagaaat aacgctcttt accgccgatt tggttcacta
    26521 cctgccataa agcagcaagg ctggcggacg ttttaacggt aaaccccgcc tgtttggcaa
    26581 aataaccgta ctccggtcgc cagcgggcaa aggcctgagc gtcgtagccc cagtcgctgg
    26641 agttgaccag tttttcctcc tctttcaacg tgctacgtac cgcgtcatcg aaagcgatca
    26701 gccgttgtgg gatgagtgca cgtagcgcgg tatcatccgc cagcagatcg tgtttcagcc
    26761 cctgaatcaa cgccctggcg gtggtgggcg gtacggaagt aatcacattg agaaaccaca
    26821 ccgaaatcca gcgggtgggg agggggatgg ggatcaacca gcggcgctta ccgctcaccg
    26881 ccataaaatg ttcaaactgt tgctgataac tgagcacctc tggtccggcg gcttcgaaga
    26941 tgcggtgttc gctggccgga tgatctaaca acgccaccag atagtgcagc aagttttcca
    27001 gcgcgatggg cgtggtgcgt gaacgtaccc agcgtggcgg cgttaacact ggcaggttgt
    27061 agaccatatc gcgcatgact tcgaacgccg ctgaacctgc gccaacgata attccggccc
    27121 gaagttcggt cacaggtaca ttcgcttcac gaagaatgtc cgccgtagcc tgacgagcac
    27181 gcagatgatc cgactgctca tgtggcgggg cctgcaacga actgagaaag attaattgct
    27241 taactggtac ttcacgtagc gcatcgcgga cgttgagagc cacctggcgc tcctgagcga
    27301 taaaatcgcc gccttcgccc atgctgtgca ccagaaaata gacggtatcg atatcctgca
    27361 acagggccgg aaggttatcc ggccagctga gatcgacttt atggcaactg acgtttgcca
    27421 gttgcagctt tgcaagcctg tcgacatgac gtgccgccgc caggatctga tgcccttgct
    27481 ggctgagtgt gcgcaccaga tgctgaccaa tgtagccact ggcaccgaga actaaaatgc
    27541 gttgcggcac gtctctctcc ttaacgcgcc aggaatgcgc gccagtgggc ggcgacttcc
    27601 gccagttgtt cgcgcgagac gtcaagatgc gtcaccaggc ggacaatcgg cgaggcgtta
    27661 atcagcacgt ttctcacttt catgtattcg cctaacgcgg cagcattttc ttccccgacg
    27721 cgaacaaaca gcatattagt gtcctgacgc atcacatccg cgcctgcttc acgcagttgc
    27781 tccgccatcc aggcggcgtt gtcgtgatct tcctgcaacc gtgcgacgtt atttttcagg
    27841 gcatacatcc cggcggcagc cagaatcccg gactgacgca tcccgccacc ggccattttc
    27901 cgccagcgga tggcacgttt aatgtaatca cgattaccga cgagtaatga accgactggc
    27961 gtcccaagac ctttcgacag gcaaatggtg aacgaatcac aatattgcgt gatctctttc
    28021 agttcgcagc cgtaagccac cacggcatta aagatgcgcg caccgtcaac atgcagcgcc
    28081 agattgcgct cgcgggtaaa ttcccatgct tctttcaggt attcacgcgg cagcactttg
    28141 ccgttgtggg tgttttccag actgagtaat ttggtgcggg cgaaatggat atcgtcgggt
    28201 ttgattttca tcgccacttt atccagcggt agcgtgccgt cggcagccgc gtcgatgggg
    28261 tgcggctgaa tactgcccag caccgctgcg ccaccggctt caaacagata gttatgcgcg
    28321 gcctgaccga caatatactc ttcgccacgt tcgcagtgac tgagcagagc gaccaggttg
    28381 gcctgagtgc cggtaggcag aaaaatggcg gcttctttac cggaaagctc tgctgcatag
    28441 tcctgcagag cattaacggt agggtcgtct ccgtaaacgt cgtccccaac cggggcggcc
    28501 atcatcgctt cgagcatggc gcggctcggt cgggtaacgg tatcactgcg taaatcaatc
    28561 atggcatgtc cttattatga cgggaaatgc cacccttttt accttagcca gttcgttttc
    28621 gccagttcga tcacttcatc gccgcgtccg ctgatgattg cgcgcaacat atacaagcta
    28681 aatcctttgg cctgttcgag tttgatctgc ggtggaatgg ctaactcttc tttggcgacc
    28741 accacatcca ccagcaccgg accgtcgatg gagaaggcgc gttgcagggc ttcatcaact
    28801 tcagacgctt tttctacacg gatacccgta atgccgcacg cttcggcaat gcgggcaaag
    28861 tttgtgtcgt gtagttcggt gccgtcagtc aaatagccac cagctttcat ctccatcgcc
    28921 acaaagccca gcacgctgtt gttaaagacg acaattttca ctggcagttt catctgcact
    28981 actgagagga aatcgcccat caacatgcta aaaccgccat cgccgcacat ggcgaccacc
    29041 tgacgttctg gctctgtcgc ctgcgcaccc agcgcctgcg gcatggcgtt agccatcgaa
    29101 ccgtggttaa acgaacctaa caggcgacgc ttgccgttca tttttagata acgtgccgcc
    29161 cacaccgttg gcgtaccaac gtcacaggtg aaaatagcgt catcggcggc aaaatgacta
    29221 atttgctgcg ccagatattg cgggtgaatg gctttctcgc tcggtttagc taaatcgtcc
    29281 agccctttgc gggcgtcgcg gtaatcttcc agcgctttat ccagaaactt gcgatcggct
    29341 ttttcttcca ccaatggaag caatgcacgc agagtcgact tgatatcgcc gaccagtgcc
    29401 atatccacct tgctgtgagc gccgatgctg gctgggttga tatcaatctg aatgattttg
    29461 gcatcggtcg ggtagaaggc gcggtaggga aattgcgtgc cgagtagcac taacgtgtcg
    29521 gcgttcatca tggtatggaa acctgacgag aagccgatta acccggtcat tccaacatca
    29581 tacggattat cgtattcgac atgttcttta ccgcgcaggg catgaacaat aggcgcttta
    29641 attttcccgg caaactcaac taactcttta tgcgcccccg cgcagccgct gccacacatc
    29701 agggcgatat tgctggaata acgcagcagt tgcgccagtt tgcgtaactc ttcttcttcc
    29761 ggcgtcacga ctggttgtgg cgcatgatac cagtgcgtgg ttgccccttc tggcgcaggt
    29821 tttaacgcca cgtcgcctgg taacacgaca accgaaacgc cacggttaag caccgctttg
    29881 cgcatggcaa tcgccagtac ttgtgggatc tgctccgggc tggaaaccag ctcgcaatag
    29941 tgactacatt cgcggaatag ctcttgtggg tgggtttcct ggaaatagcc gctgccaatt
    30001 tcgctggagg gaatatgagc ggcaatcgcc agtaccggaa cgtgattgcg gtggcaatca
    30061 aacaggccgt tgattaagtg caggttgccg gggccgcacg atccggcgca gaccgccagt
    30121 tctccgctaa gttgtgcttc agcgccagcg gcaaaggccg ccacttcttc gtggcgggtg
    30181 gacatccact cgatggtgcc catgcgatta agactgtcac taagaccatt cagagagtcg
    30241 cctgtgactc cccagatgcg tttcacccct gccgattcga gtgttttggc gatataagct
    30301 gcaaccgttt gtttcatggt tctccatctc ctgaatgtga taacggtaac aagtttagtt
    30361 catctgacgg agggggaagg gatgggagag aaaggaggca ctaacggtta aatagcccga
    30421 tgaaaggaat atcatcgggc ataaggcgat tatgcgagaa ccaaatcccc ctgcggatgg
    30481 caggagcagg ccagtacgta accttcagcg atttcggcgt cggtcagcgt cattgtactg
    30541 ctcaccgtat attcaccgga aaccactttt gtcttacagc agccgcaaac acccgcacgg
    30601 caggcagcga caaccggaac gttattgctt tccagcgcct ccagtagcgt ggtgccaacc
    30661 ggggcgtaaa attctcgtgc cggttgcagt ttggtgaatt tcagaccgct ggtcgccgct
    30721 tctgctactg gggtgaagaa tttctcttta aagaaacgcg tcacgccgag cgctttcact
    30781 tcctgctcta cccaatccat atacggagcc gggccgcagg tcatcacggt acgtgaagct
    30841 aagtcaggta cacctgccag cagttcgcga gtgagacgac cagcgataaa gccttcggta
    30901 acgttatttt ctgccaccag cgttaccgga tagttacgcc actcatcggc gaaaataaca
    30961 tcctgcggcg tacgcacgtt gtagatcacc cgcacatcgg cctgtggacg gttcttcgca
    31021 agccagcgac gcatcgacat aatcggcgtg acgccgcagc ctgccgccag caacaggaat
    31081 ttatcttctg ctttatcgtc gcaggtaaat tcccccatcg cgtccgaaag ccagagataa
    31141 tcaccgcgtt ttacatcgcg cgtcagccac tgggagccga caccgtcatc aatccgccgc
    31201 acggtcaggg tgatatattc actcacgcct ggcgtggagg aaatggtgta agcacgcagc
    31261 gtttccgctg agtttcgcac gctgaccagt gcatattgcc cggcgcgata tgggtagtaa
    31321 tcgtggcaaa tcagggaaat cgtccacaca tccggcgttt cttgcgtaat gtgatgaacc
    31381 tgcatccgcc acgggcattg attcgttggc atcgtcatcg acaaactcct tacgcgctca
    31441 acagttgctt catgtcttct tcaacagtgg tgatagaacg caggccgaat ttctcgttca
    31501 gcaccgccag caggtctggt gtcaggaaac caggtgcagt cgggccggtg acgatatttt
    31561 tcacgcccag agaaagcagc gtcagcagaa tgacgatcgc tttctgttca aaccaggaga
    31621 gcaccagcga cagcggcaga tcgttcacac cacagcccag tttctctgcc agagtgacag
    31681 ccagaataat cgctgagtaa gcatcgttac attgacctgc atctaccaga cggggcagac
    31741 cttcgatatc gccaaactca agtttgttaa agcgatattt accacaggcg agggtcagga
    31801 tcaggcagtc atccggcacg atggtggcga aatcggtgaa gtagtggcgc tcgccgcgtg
    31861 cgccgtcaca gccaccaagc aggaagatat gacgcagttt ttcacggctc accagatcaa
    31921 tcagcgtatc agcagcgcca agcagcgtct ggcgaccaaa acccacggtg ataaggtgcg
    31981 gaatttcgct gtacgggaag cctgccatct gttgcgcttg ggtgataacc gcagagaaat
    32041 catcaccgtc cagatgacgc acgccaggcc agccaacaat gctgcgggtc cagatacgat
    32101 cgtcataagc gcttacggtt gggtcgatga tgcagttcga ggtcatcacg atggggccag
    32161 ggaaacgagc gaactccact tgctgattct gccagccgct gccgtagtta ccgaccagat
    32221 gcttgaattt acgcagctcc gggtagccat gcgcaggcag catttcgccg tgggtgtaga
    32281 cattaacgcc cgtgccttcg gtctgttcca gcaggttgta gagatctttg agatcgtgac
    32341 cggaaatcag aatgcattta cccgccgtcg ctttgacgtt gacctgggtt ggcgtcgggt
    32401 gaccgtattt accggtttcg cctgcatcca gaatgctcat cactttgaag ttcatctggc
    32461 cgatttccat tgaacactca agaagcgcgt tcatatcggc aggccaggtc cccagccacg
    32521 ccatgatttt atggtactgg gcataaatat cgttgtcgta ttgaccgaga acatgcgcgt
    32581 gttccatata ggccgccgca cctttcaggc catacaggca cagcagacgc aggccgagaa
    32641 tgttttcgcc aatcgccgct ttatctttgt taggggtaaa ttctgctgcc tgacgttgca
    32701 gctcgccgag atcatcgctc accagttgca ggtcagccat cgggttatcg acgcgcgcgt
    32761 tggcatctac agccaggcat tgtgctttca gcgcctcgcg caaggcaatc gcttcacgag
    32821 cgtagccgac aatacgcgga gaatcgaagt taacgttggt cagggttgag aaaaaggcac
    32881 gtggcgcgaa gctgtcaaca tcgtggttga tgatgccgta ttcacgcgct tttaccgccc
    32941 aggcagaaag cccttgcagc gccgcgatga gtaaatcctg aaggtcagaa gtttccgccg
    33001 ttttaccaca catcccctgc gcgtatgagc agccgtttcc tgccggagta cggatagttt
    33061 gttcacattg cacacaaaac atgatcacac cttttaaagt tatatttaat atacatgttt
    33121 aaggttaaga cgcttaacgc ggggataaaa gggatttttc atgcaacttt aagggagatt
    33181 gatttagcgc aattttggcg gcagggatct accgccagag aggtattacg cagagaaaaa
    33241 ggcgatgagg atcggcacta acaggctaag aataaaaccg tgaacaattg ccgccgggac
    33301 catatccagc ccgccagtac gttgaagaac gggtagggtg aaatccattg atgtggcacc
    33361 gcataagccc agtgcagtag agcagctgcg gcgaatcagc ccagggatca acataatagc
    33421 aatcagttca cgggccagat cattaaaaaa cgccgcgctc ccgattaccg gaccaaaaga
    33481 ttcggtcaat aaaataccgg aaagagaata ccagccgaaa ccggaggcca ttgccagcgc
    33541 ggtattgatg gggagatcaa gaataaaggc gttaattaaa ccaccaatta atgaactgac
    33601 aaccaccacc acggcgacaa tcattccccg gcgattaagg acaatctgct ttaaggtcat
    33661 gccattattg cgcaactgaa taccaacgag gaaaagtagc aaaattaacg tgtattcact
    33721 ggcttcggtc gcgtgttgta agaaagccag tccactcaga ccaatggcaa aaccaatcac
    33781 tactacgccg cacagtttta gcgactccag cgccatcgca atacgcgacg ggagtttttc
    33841 ttgctgatgg tggttgcgcc acggcaggcc tcgctccagc cacatcaggg cggcaatatt
    33901 acacagtaaa ataacggtaa tactgacggc agaataatgc agaatcgcca acaggttact
    33961 ggcgaggtta tcgagaaacg ccagactgat acccataaaa aagagaataa ggtaaaccat
    34021 ccagcttaat agctgattaa taacttttaa cgcagcttgt tggcgaagcg gaatgaggta
    34081 acccacaatc aggggaacca gaatgattaa cagcccagaa aacatgaaaa cccagtcctt
    34141 gcaaagatga agtcgaaatg cgcgatgaca cactactgaa agcggaagga cgagtaaagt
    34201 tgcaattaaa aggaaatgtt atgcataagg gcagtagagt attcgttttc atttaaagat
    34261 attcttgcgc tttaattaca aactgcaccg atgttggtgg cgtcaaaatc gccgaggcgt
    34321 tccctgaagg ccggggcagc ccacatggat gtgggctgag ggcgcgtttt acagggatgt
    34381 tacctcgcgc ccgacccggt agccgtaagg gataagtcga gggcaccgcg cagcggcgat
    34441 tttgttcgcc agagcccggg ggggcagggg gcggcggcga ttggccgccc cctgcgcgct
    34501 ccttgcgcca gtggcaatat gtggcttagc tcatgaaagg agcgcaacaa gatgatgaat
    34561 caacatataa caacatctta aaaaaggcct gacattacgc caggccttct gcgttaatta
    34621 atcacgcttt tccagcaggg tccggtaaat cagaccaccg ataatgccgc cgacaattgg
    34681 caccacccag aagaaccaca gttgttctaa tgcccagccg ccctggaaga tagcaaccgc
    34741 ggtgctgcgc gccgggttaa cagaagtgtt agtcaccgga atactaatta agtgaatcag
    34801 ggttaaggcc agaccaatag cgatcggcgc aaaacctgct ggcgcgaatt tggcggttgc
    34861 gccgtggatc accaacagga aacctgcact caataccagt tcaactacca gcgcggaaag
    34921 catggaataa ccgcctggtg aatgctcgcc ataaccgtta gaagcaaaac cgctggctgc
    34981 cgcgtcaaaa cccgttttac cactggcaat taaatacagc agcgccgctg caacaatacc
    35041 gccgacaacc tgggcaatta cgtagccaac gacttctttt gccggaaaac gtccgccagc
    35101 ccataaacca atagtgaccg ccgggttaaa atgaccacca gaaatatgac caacagcaaa
    35161 ggccatcgtc agaacggtca gaccgaacgc caacgccacg ccggcaaaac caatgcctaa
    35221 ttccgggaag cctgcggcca gtacagcact accacagcca ccaaaaacaa gccagaaagt
    35281 accaaaacat tcagctgcta attttctgaa catatccacc tcaattaaaa attgaccctg
    35341 tgaaaaatat ggtcgtttta tagggtcgtc gtaaaaaaat gacgacggaa ataatgcgcg
    35401 gctattttaa aaacgaaggc gagtcattca ccagataaat aaatccagta aatttg
//
LOCUS       DADMHC010000017        35289 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.017, whole genome shotgun sequence.
ACCESSION   DADMHC010000017 DADMHC010000000
VERSION     DADMHC010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 35289)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35289)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35289
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.017"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..149
                     /locus_tag="JNZ57_000681"
     CDS             <1..149
                     /locus_tag="JNZ57_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2541 family protein"
                     /protein_id="HAY8827001.1"
                     /translation="SEIKEGQTTDWININSDNDNKRCVSKITFSGHTVNSSDMATLKI
                     IGDD"
     gene            175..888
                     /gene="msyB"
                     /locus_tag="JNZ57_000682"
     CDS             175..888
                     /gene="msyB"
                     /locus_tag="JNZ57_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acidic protein MsyB"
                     /protein_id="HAY8827002.1"
                     /translation="MNVNYLNDSDLDFLQHCSEEQLANFARLLTHNEKGKTRLSSVLM
                     RNELFKSMEGHPEQHRRNWQLIAGELQHFGGDSIANKLRGHGKLYRAILLDVSKRLKL
                     KADKEMSTFEIEQQLLEQFLRKTWKKMDEEHKQEFLHAFDARVNELEELLPLLMKDKL
                     LAKGVSHLLSSQLTRILRTHAAMSVLGHGLLRGAGLGGPVGAALNGVKAVSGSAYRVT
                     IPAVLQIACLRRMVSATQV"
     gene            1037..1603
                     /gene="satP"
                     /locus_tag="JNZ57_000683"
     CDS             1037..1603
                     /gene="satP"
                     /locus_tag="JNZ57_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate uptake transporter"
                     /protein_id="HAY8827003.1"
                     /translation="MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIF
                     YSGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVY
                     LGLWGVFTLFMFFGTLKGARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLIC
                     GASAIYLAMGEVLNEQFGRTVLPIGESH"
     gene            complement(1638..2225)
                     /gene="mog"
                     /locus_tag="JNZ57_000684"
     CDS             complement(1638..2225)
                     /gene="mog"
                     /locus_tag="JNZ57_000684"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HAY8827004.1"
                     /translation="MNTLRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELET
                     RLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQ
                     MRQISLHFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKDAAGNVVVHGIFA
                     SVPYCIQLLEGPYVETAPEVVAAFRPKSARRDVSE"
     gene            complement(2340..3293)
                     /gene="tal"
                     /locus_tag="JNZ57_000685"
     CDS             complement(2340..3293)
                     /gene="tal"
                     /locus_tag="JNZ57_000685"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HAY8827005.1"
                     /translation="MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQ
                     IPEYRKLIDDAVAWAKQQSNDRAQQIVDATDKLAVNIGLEILKLVPGRISTEVDARLS
                     YDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFS
                     FAQARACAEAGVFLISPFVGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGY
                     ETVVMGASFRNIGEILELAGCDRLTIAPTLLKELAESEGAIERKLSYIGEVKARPARI
                     TESEFLWQHNQDPMAVDKLAEGIRKFAIDQEKLEKMIGDLL"
     gene            3572..5002
                     /locus_tag="JNZ57_000686"
     CDS             3572..5002
                     /locus_tag="JNZ57_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HAY8827006.1"
                     /translation="MPDFFSFINSVLWGSVMIYLLFGAGCWFTFRTGFVQFRYIRQFG
                     KSLKNSIHPQPGGLTSFQSLCTSLAARVGSGNLAGVALAITAGGPRAVFWMWVAAFIG
                     MATSFAECSLAQLYKERDVNGQFRGGPAWYMARGLGMRWMGVLFAVFLLIAYGIIFSG
                     VQANAVARALSFSFDFPPLVTGIILAVFALLAITRGLHGVARLMQGFVPLMAIIWVLT
                     SMVICVINIGQLPHVIWSIFESAFGWQEAAGGAAGYTLSQAITNGFQRSMFSNEAGMG
                     STPNAAAAAASWPPHPAAQGIVQMIGIFIDTLVICTASAMLILLAGNDTTYMPLEGIQ
                     LIQKAMRVLMGSWGAEFVTLVVILFAFSSIVANYIYAENNLFFLRLNTPKAIWCLRIC
                     TFATVIGGTLLSLPLMWQLADIIMACMAITNLTAILLLSPVVHTIASDYLRQRKLGVR
                     PVFDPLRYPDIGRQLSPDAWDDVSQE"
     gene            5072..5848
                     /gene="yaaA"
                     /locus_tag="JNZ57_000687"
     CDS             5072..5848
                     /gene="yaaA"
                     /locus_tag="JNZ57_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HAY8827007.1"
                     /translation="MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPP
                     QISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFD
                     FAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALA
                     AQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRF
                     IIENRLTKPEQLTGFNSEGYFFDEASSSNGELVFKRYEQR"
     gene            complement(6001..6297)
                     /locus_tag="JNZ57_000688"
     CDS             complement(6001..6297)
                     /locus_tag="JNZ57_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2502 domain-containing protein"
                     /protein_id="HAY8827008.1"
                     /translation="MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGY
                     YWDGGHWRDHGWWKQHYEWRGNRWHPHGPPPPPRHHKKAPHDHHGGHGPGKHHR"
     gene            complement(6511..7797)
                     /gene="thrC"
                     /locus_tag="JNZ57_000689"
     CDS             complement(6511..7797)
                     /gene="thrC"
                     /locus_tag="JNZ57_000689"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HAY8827009.1"
                     /translation="MKLYNLKDHNERVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEID
                     EMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGP
                     TLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRG
                     KISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISR
                     LLAQICYYFEAVAQLPQEARNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVN
                     DTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDE
                     TTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGE
                     TLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ"
     gene            complement(7798..8730)
                     /gene="thrB"
                     /locus_tag="JNZ57_000690"
     CDS             complement(7798..8730)
                     /gene="thrB"
                     /locus_tag="JNZ57_000690"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HAY8827010.1"
                     /translation="MVKVYAPASSANMSVGFDVLGAAVTPVDGALLGDVVTVEAAETF
                     SLNNLGRFADKLPSEPRENIVYQCWERFCQELGKQIPVAMTLEKNMPIGSGLGSSACS
                     VVAALMAMNEHCGKPLNDTRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENDI
                     ISQQVPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQ
                     PELAAKLMKDVIAEPYRERLLPGFRQARQAVAEIGAVASGISGSGPTLFALCDKPDTA
                     QRVADWLGKNYLQNQEGFVHICRLDTAGARVLEN"
     gene            complement(8732..11194)
                     /gene="thrA"
                     /locus_tag="JNZ57_000691"
     CDS             complement(8732..11194)
                     /gene="thrA"
                     /locus_tag="JNZ57_000691"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase I"
                     /protein_id="HAY8827011.1"
                     /translation="MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKIT
                     NHLVAMIEKTISGQDALPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIK
                     HVLHGISLLGQCPDSINAALICRGEKMSIAIMAGVLEARGHNVTVIDPVEKLLAVGHY
                     LESTVDIAESTRRIAASRIPADHMVLMAGFTSGNEKGELVVLGRNGSDYSAAVLAACL
                     RADCCEIWTDVDGVYTCDPRQVPDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQF
                     QIPCLIKNTGNPQAPGTLIGASRDEDELPVKGISNLNNMAMFSVSGPGMKGMVGMAAR
                     VFAAMSRARISVVLITQSSSEYSISFCVPQSDCVRAERAMQEEFYLELKEGLLEPLAV
                     TERLAIISVVGDGMRTLRGISAKFFAALARANINIVAIAQGSSERSISVVVNNDDATT
                     GVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKA
                     LLTNVHGLNLENWQEELAQAKEPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYAD
                     FLREGFHVVTPNKKANTSSMDYYHLLRHAAEKSRRKFLYDTNVGAGLPVIENLQNLLN
                     AGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDPRDDLSGMDVARK
                     LLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMANLSQLDDLFAARVAKARDEG
                     KVLRYVGNIDEDGACRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAG
                     NDVTAAGVFADLLRTLSWKLGV"
     gene            complement(11275..11340)
                     /gene="thrL"
                     /locus_tag="JNZ57_000692"
     CDS             complement(11275..11340)
                     /gene="thrL"
                     /locus_tag="JNZ57_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thr operon leader peptide"
                     /protein_id="HAY8827012.1"
                     /translation="MKRISTTITTTITITTGNGAG"
     gene            complement(11554..12240)
                     /locus_tag="JNZ57_000693"
     CDS             complement(11554..12240)
                     /locus_tag="JNZ57_000693"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA/rRNA methyltransferase"
                     /protein_id="HAY8827013.1"
                     /translation="MRITIILVAPARAENIGAAARAMKTMGFSELRIVDSQAHLEPAT
                     RWVAHGSGDIIDNIKVFPTLVESLHDVDFTVATTARSRAKYHYYATPVELVLLLEEKS
                     SWMSHAALVFGREDSGLTNEELALADVLTGVPMVADYPSLNLGQAVMVYCYQLATLIQ
                     QPTKSDTTADQHQLQALRERVMALLTTLAVADDIKLVDWLQQRLGLLEQRDTAMLHRL
                     LHDIEKNITK"
     gene            complement(12640..12780)
                     /locus_tag="JNZ57_000694"
     CDS             complement(12640..12780)
                     /locus_tag="JNZ57_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827014.1"
                     /translation="MTKVRNCVLDALSINVNNIISLVVGTFPQDPTVSKTAVILTILT
                     AT"
     gene            12876..13592
                     /gene="arcA"
                     /locus_tag="JNZ57_000695"
     CDS             12876..13592
                     /gene="arcA"
                     /locus_tag="JNZ57_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003856501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator ArcA"
                     /protein_id="HAY8827015.1"
                     /translation="MQTPHILIVEDELVTRNALKSIFEAEGYDVFEATDGAEMHQILS
                     EYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYIT
                     KPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLISPDGEQYK
                     LPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDT
                     PEIIATIHGEGYRFCGDLED"
     gene            complement(13652..15004)
                     /gene="creD"
                     /locus_tag="JNZ57_000696"
     CDS             complement(13652..15004)
                     /gene="creD"
                     /locus_tag="JNZ57_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein CreD"
                     /protein_id="HAY8827016.1"
                     /translation="MLKSPLFWKMTTLFGAVLLLLIPIMLIRQVIVERADYRSDVEDA
                     IRQSTSGPQKLVRPLIAIPVTELYTVQEEDKTVERKRSFIHFWLPESLMVDGNQNVEE
                     RKIGIYTGQVWHSDLTLKADFDVSRLSELNAPNIILGKPFIVISVGDARGIGVVKAPE
                     VNGTALTIEPGTGLEQGGQGVHIPLPEGDWRKQNLQLNMALNLSGTGDLSVVPAGRNS
                     EMTLTSNWPHPSFLGDFLPAKREVSESGFQAQWQSSWFANNLGERFASGNDTGWENFP
                     AFSVAVTTPADQYQLTDRATKYAILLIALTFMAFFVFETLTAQRLHPMQYLLVGLSLV
                     MFYLLLLALSEHIGFTVAWIIASLIGALMNGIYLQAVLKGWRNSMLFTLALLLLDGVM
                     WGLLNSADSALLLGTSVLVVALAGMMFVTRNIDWYAFSLPKMKASKEVTMDDQLRIWK
                     "
     gene            complement(15062..16486)
                     /gene="creC"
                     /locus_tag="JNZ57_000697"
     CDS             complement(15062..16486)
                     /gene="creC"
                     /locus_tag="JNZ57_000697"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     CreC"
                     /protein_id="HAY8827017.1"
                     /translation="MRIGMRLLLGYFLLVAVAAWFVLAIFVKEVKPGVRRATEGTLID
                     TATLLAELARPDLLSGDPTHGQLAQAFNQLQHRPFRANIGGINKVRNEYHVYMTDSQG
                     KVLFDSANKAVGQDYSRWNDVWLTLRGQYGARSTLQNPADPESSVMYVAAPIMDGSRL
                     IGVLSVGKPNAAMAPVIKRSERRILWASAILLGIALVIGAGMVWWINRSIARLTRYAD
                     SVTDNKPVPLPELGSSELRKLAQALESMRVKLEGKNYIEQYVYALTHELKSPLAAIRG
                     AAEILREGPPPEVVARFTDNILTQNARMQALVETLLRQARLENRQEVVLTVVDVAALF
                     RRVSEARTVQLAEKNITLHVMPTEVNVAAEPALLEQALGNLLDNAIDFTPESGRITLS
                     AEVDQEHVALKVLDTGSGIPDYALSRIFERFYSLPRANGQKSSGLGLAFVSEVARLFN
                     GEVTLRNVQEGGVLASLRLHRHFT"
     gene            complement(16486..17175)
                     /gene="creB"
                     /locus_tag="JNZ57_000698"
     CDS             complement(16486..17175)
                     /gene="creB"
                     /locus_tag="JNZ57_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator CreB"
                     /protein_id="HAY8827018.1"
                     /translation="MQRETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKAR
                     QLVPDVMILDVGLPDISGFELCSQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYV
                     AKPFSPREVCARVRTLLRRVKKFSSPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEF
                     LLLKTLLKSPGRVWSRQQLMDSVWEDAQDTYDRTVDTHIKTLHAKLRAINPDLSPINT
                     HRGMGYSLRGL"
     gene            complement(17188..17661)
                     /gene="creA"
                     /locus_tag="JNZ57_000699"
     CDS             complement(17188..17661)
                     /gene="creA"
                     /locus_tag="JNZ57_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein CreA"
                     /protein_id="HAY8827019.1"
                     /translation="MKYKHLILSLSLIMLGPLAHAEEIGSVDTVFKMIGPDHKIVVEA
                     FDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTSDAAISCQQVGPIELSDRIKNGKAQGE
                     VVFKKRTSLVFKSLQVVRFYDAKRNALAYLAYSDKVVEGSPKNAISAVPVMPWRQ"
     gene            17872..18741
                     /gene="robA"
                     /locus_tag="JNZ57_000700"
     CDS             17872..18741
                     /gene="robA"
                     /locus_tag="JNZ57_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MDR efflux pump AcrAB transcriptional activator
                     RobA"
                     /protein_id="HAY8827020.1"
                     /translation="MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKD
                     VTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPAL
                     YRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMR
                     YQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVM
                     LQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAEDAKAGDRP
                     INLRCELLIPIRR"
     gene            complement(18738..19385)
                     /gene="gpmB"
                     /locus_tag="JNZ57_000701"
     CDS             complement(18738..19385)
                     /gene="gpmB"
                     /locus_tag="JNZ57_000701"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase GpmB"
                     /protein_id="HAY8827021.1"
                     /translation="MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAK
                     ELGITHIISSDLGRTRRTAEIIAQACGCDIIFDSRLRELNMGVLEKRHIDSLTEEEEN
                     WRRQLVNGTVDGRIPEGESMQELSDRVNAALESCRDLPQGSRPLLVSHGIALGCLVST
                     ILGLPAWAARRLRLRNCSISRVDYQESLWLASGWVVETAGDISHLDAPALDELQR"
     gene            19437..19958
                     /gene="yjjX"
                     /locus_tag="JNZ57_000702"
     CDS             19437..19958
                     /gene="yjjX"
                     /locus_tag="JNZ57_000702"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001649724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP phosphatase"
                     /protein_id="HAY8827022.1"
                     /translation="MHQVVCATTNPAKIQAILQAFHEIFGEESCHIASVAVESGVPEQ
                     PFGSEETRAGARNRVANARRLLPEADFWVAIEAGIDGDSTFSWVVIENTSQRGEARSA
                     TLPLPAVILQKVREGEALGPVMSRYTGIDEIGRKEGAIGVFTAGKLTRASVYHQAVIL
                     ALSPFHNAVYQAL"
     gene            complement(20043..20369)
                     /gene="trpR"
                     /locus_tag="JNZ57_000703"
     CDS             complement(20043..20369)
                     /gene="trpR"
                     /locus_tag="JNZ57_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon repressor"
                     /protein_id="HAY8827023.1"
                     /translation="MAQQSPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLT
                     PDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEE
                     VLLKSD"
     gene            complement(20459..22396)
                     /gene="sltY"
                     /locus_tag="JNZ57_000704"
     CDS             complement(20459..22396)
                     /gene="sltY"
                     /locus_tag="JNZ57_000704"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase"
                     /protein_id="HAY8827024.1"
                     /translation="MEKAKQVTWRLLAAGVCLLTVSSVARADSLDEQRSRYAQIKQAW
                     DNRQMDVVEQMMPGLKDYPLYPYLEYRQITDDLMNQPAVTVTNFVRANPTLPPARTLQ
                     SRFVNELARREDWRGLLAFSPEKPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGK
                     SQPNACDKLFSVWRASGKQDPLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAI
                     ISLANNPNTVLTFARTTGATDFTRQIAAVAFASVARQDAENARLMIPSLAQAQQLNED
                     QIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTW
                     LARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQQRGFYPMVAAQRIGEEYE
                     LKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKSKSKTEQAQLARYA
                     FNNQWWDLSVQATIAGKLWDHLEERFPLAYNDLFKRYTSGKEIPQSYAMAIARQESAW
                     NPKVKSPVGASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQ
                     QFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAVAFVESIPFSETRGYVKNVLAYDAY
                     YRYFMGDKPTLMSATEWGRRY"
     gene            22607..24274
                     /gene="ettA"
                     /locus_tag="JNZ57_000705"
     CDS             22607..24274
                     /gene="ettA"
                     /locus_tag="JNZ57_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HAY8827025.1"
                     /translation="MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAG
                     KSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEAQLNPEHTVRESIEEAVSEVVNALK
                     RLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKI
                     ANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHD
                     RYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWV
                     RQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYG
                     DRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVD
                     QFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGER
                     GRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIA
                     THILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKRIKYKRIAK"
     gene            complement(24581..25813)
                     /locus_tag="JNZ57_000706"
     CDS             complement(24581..25813)
                     /locus_tag="JNZ57_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418807.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trifunctional nicotinamide-nucleotide
                     adenylyltransferase/ribosylnicotinamide
                     kinase/transcriptional regulator NadR"
                     /protein_id="HAY8827026.1"
                     /translation="MSSFDYLKTAIKQQGCTLQQVADASGMTKGYLSQLLNAKIKSPS
                     AQKLEALHRFLGLEFPRQKKTIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGFDD
                     TRDRALFEDSAMSQQPTVPDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNG
                     IKKFMAEKGIQPDLIYTSEEADAPQYMEHLGIDTVLVDPKRTFMSISGAQIRENPFRY
                     WEYIPTEVKPFFVRTVAILGGESSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDE
                     IALQYSDYDKIALGHAQYIDFAVKYANKVAFIDTDFVTTQAFCKKYEGREHPFVQALI
                     DEYRFDLVILLENNTPWVADGLRSLGSSVDRKEFQNLLVEMLEENNIEFVRVEEDDYD
                     SRFLRCVELVREMMGEQR"
     gene            complement(25834..27216)
                     /gene="radA"
                     /locus_tag="JNZ57_000707"
     CDS             complement(25834..27216)
                     /gene="radA"
                     /locus_tag="JNZ57_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001399683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HAY8827027.1"
                     /translation="MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPT
                     VARNERLSGYAGSAGVAKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGG
                     NPGAGKSTLLLQTLCKLAQQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIE
                     QICLIAEEEQPKLMVIDSIQVMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMV
                     GHVTKDGSLAGPKVLEHCIDCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQG
                     LREVSNPSAIFLSRGDEVTSGSSVMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLE
                     QNRLAILLAVLHRHGGLQMADQDVFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQ
                     DLVVFGEVGLAGEIRPVPSGQERISEAAKHGFRRAIVPAANVPKKAPEGMQIFGVKKL
                     SDALSVFDDL"
     gene            complement(27265..28233)
                     /gene="serB"
                     /locus_tag="JNZ57_000708"
     CDS             complement(27265..28233)
                     /gene="serB"
                     /locus_tag="JNZ57_000708"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase"
                     /protein_id="HAY8827028.1"
                     /translation="MPNITWCDLPEDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYG
                     RGLDKQRLTQYQSKLGAAMVIVAAWCVEDYQVIRLAGSLTARATRLAHEAQLDVAPLG
                     KIPHLRTPGLLVMDMDSTAIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRS
                     RVATLKGADANILQQVRENLPLMPGLTQLVLKLETLGWKVAIASGGFTFFAEYLRDKL
                     RLTAVVANELEIMDGKFTGNVIGDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGAND
                     LPMIKAAGLGIAYHAKPKVNEKAEVTIRHADLMGVFCILSGSLNQK"
     gene            28339..28983
                     /locus_tag="JNZ57_000709"
     CDS             28339..28983
                     /locus_tag="JNZ57_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtjB family periplasmic protein"
                     /protein_id="HAY8827029.1"
                     /translation="MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQ
                     LEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIAR
                     SGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDN
                     TTNILRLMLLLSLAIGVVLTRTLLQGKRTHWQQSPFLLTASKPVPEEEESEKKE"
     gene            29011..30027
                     /gene="lplA"
                     /locus_tag="JNZ57_000710"
     CDS             29011..30027
                     /gene="lplA"
                     /locus_tag="JNZ57_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase LplA"
                     /protein_id="HAY8827030.1"
                     /translation="MSTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTV
                     VIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTIST
                     SIVLNALNALGVSAEASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNADLS
                     RLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITKAFFAHYGERVEA
                     EIISPDKTPDLPNFAEIFARQSSWEWNFGQAPAFSHLLDERFSWGGVELHFDVEKGHI
                     TRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPDQEKELRELSTWIA
                     GAVR"
     gene            complement(30483..31202)
                     /gene="deoD"
                     /locus_tag="JNZ57_000711"
     CDS             complement(30483..31202)
                     /gene="deoD"
                     /locus_tag="JNZ57_000711"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HAY8827031.1"
                     /translation="MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVR
                     GMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLR
                     DVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLF
                     YSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAER
                     QTTFNDMIKIALESVLLGDKE"
     gene            complement(31282..32505)
                     /gene="deoB"
                     /locus_tag="JNZ57_000712"
     CDS             complement(31282..32505)
                     /gene="deoB"
                     /locus_tag="JNZ57_000712"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HAY8827032.1"
                     /translation="MKRAFIMVLDSFGIGATEDAERFGDVGADTLGHIAEACAKGEAD
                     NGRKGPLNLPNLTRLGLAKAHEGSTGFIPAGMDGNAEVIGAYAWAHEMSSGKDTPSGH
                     WEIAGVPVLFEWGYFSDHENSFPQELLDKLVERANLPGYLGNCHSSGTVILDQLGEEH
                     MKTGKPIFYTSADSVFQIACHEETFGLDKLYELCEIAREELTNGGYNIGRVIARPFIG
                     DKAGNFQRTGNRHDLAVEPPAPTVLQKLVDEKHGQVVSVGKIADIYANCGITKKVKAT
                     GLDALFDATIKEMKEAGDNTIVFTNFVDFDSSWGHRRDVAGYAAGLELFDRRLPELMS
                     LLRDDDILILTADHGCDPTWTGTDHTREHIPVLVYGPKVKPGSLGHRETFADIGQTLA
                     KYFGTSDMEYGKAMF"
     gene            complement(32557..33879)
                     /gene="deoA"
                     /locus_tag="JNZ57_000713"
     CDS             complement(32557..33879)
                     /gene="deoA"
                     /locus_tag="JNZ57_000713"
                     /EC_number="2.4.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313368.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="HAY8827033.1"
                     /translation="MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAM
                     TIFFHDMTMPERVSLTMAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMV
                     AACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSL
                     APADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSE
                     ALAEAIVGVANGAGVRTTALLTDMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVT
                     MALCVEMLISGKLAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQKGPTDFVENYAKYL
                     PTAMLTKAVYADTEGFVSEMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQ
                     VDGQRPLAVIHAKDENSWQEAAKAVKAAIKLADKAPESTPTVYRRISE"
     gene            complement(34006..34785)
                     /gene="deoC"
                     /locus_tag="JNZ57_000714"
     CDS             complement(34006..34785)
                     /gene="deoC"
                     /locus_tag="JNZ57_000714"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005097947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HAY8827034.1"
                     /translation="MTDLKASSLRALKLMDLTTLNDDDTDEKVIALCHQTKTPVGNTA
                     AICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIEIALAETRAAIAYGADEVD
                     VVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIK
                     AGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAI
                     ADELFGADWADARHYRFGASSLLASLLKALGHGDGKSASSY"
     gene            35043..>35289
                     /locus_tag="JNZ57_000715"
     CDS             35043..>35289
                     /locus_tag="JNZ57_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3029 family protein"
                     /protein_id="HAY8827035.1"
                     /translation="MPTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQL
                     PAEARRALDEGVICDMFEGHAPYKPRYVLPDYARFLAN"
BASE COUNT         8369 a         9603 c         8837 g         8480 t
ORIGIN      
        1 cttcagaaat aaaagaaggg caaaccactg actggatcaa cattaacagt gataacgaca
       61 ataaacgctg cgtctcaaaa atcacctttt ccggtcatac ggtgaactca tcggatatgg
      121 ccacgctgaa aattatcggc gacgactaac gccagaatat agaagccaca aaaaatgaat
      181 gttaattacc tgaatgattc agatctggat tttcttcagc attgtagtga ggaacagttg
      241 gcaaatttcg cccgattgct cacccataat gaaaaaggca aaactcgcct ctccagcgta
      301 ctgatgcgca acgaactgtt taaatcgatg gaggggcatc ccgagcaaca tcgccgcaac
      361 tggcagctga ttgctggaga attacagcat tttggtggcg atagtatcgc caacaaactg
      421 cgcggacacg gtaaattgta tcgggccatt ttgctcgatg tttcaaaacg attgaagctg
      481 aaagccgaca aagagatgtc tacgtttgaa attgagcaac agttactgga acaatttctg
      541 cgtaaaacct ggaagaaaat ggacgaggaa cataagcagg agtttctgca cgcgttcgat
      601 gcgagggtga atgagctgga agagctgctg ccgctgctga tgaaagacaa attattggca
      661 aaaggcgtgt cgcatttgct ttccagccaa ctgacccgca ttttacgcac ccacgcagca
      721 atgagcgtac ttgggcatgg tttgctgcgc ggcgcggggc tgggaggccc tgtaggtgcg
      781 gcactaaatg gggttaaagc ggtcagcggc agcgcctatc gcgtgacgat tccagccgta
      841 ctgcaaatcg cctgcctgcg ccggatggtt agcgccactc aggtctgata ccggaaaccg
      901 gggaaaattt tcattttccc ctcaaaagat cgtagacact gccccactgg ctgattatta
      961 tgccgcgccc tgaaaacact acagttattc agggaaatta tttcaccatt cattcgatga
     1021 tgatttttga ggaattatgg gcaacactaa gttggctaat ccggcaccgc tgggcctgat
     1081 gggcttcggc atgaccacca ttctgcttaa cctgcacaac gtgggttatt tcgctctgga
     1141 cggtattatt cttgccatgg gcattttcta cagcggcatc gcgcaaattt ttgctggtct
     1201 gctggagtac aaaaaaggca acactttcgg tttaaccgca ttcacctctt acggttcttt
     1261 ctggctgacg ctggttgcga ttctgctgat gccgaaactg ggtctgaccg atgcgccaaa
     1321 tgcacagttc cttggtgtct acctgggtct gtggggcgta tttacgctgt ttatgttctt
     1381 cggcacgctg aaaggagcac gcgttctgca attcgttttc tttagcctga ctgtgctgtt
     1441 tgccctgctg gcgatcggta acattgccgg taacgccgca atcatccact ttgccggctg
     1501 gattggtctg atctgtggtg ccagtgcaat ctatctggcg atgggtgaag tactgaacga
     1561 gcagtttggt cgcaccgttc tgccgattgg tgaatcccac taattgtttt gagatccccc
     1621 cgctcggggg gattttttta ttcgctaacg tcgcgtcttg cactcttcgg tctgaatgca
     1681 gcaaccactt ctggtgccgt ttcaacgtat ggcccttcca gcaactgaat gcagtacggt
     1741 acgctggcaa aaataccgtg taccacaacg ttacccgcag cgtccttcac accttccagc
     1801 gtctctttaa tagacttcgg ctgaccgggt aagttaagga tcagcgcctg tttgcgaatc
     1861 acaccaacct gacgcgaaag gatcgcagtt ggtacaaaat gcaggcttat ctggcgcatc
     1921 tgttcaccaa agccaggcat ctcgcggtcc gctactgcca gcgtcgcatc gggcgttacg
     1981 tcacgacgcg ccgggccagt tccgcccgtg gtgagcacca gatggcaact catttcatcc
     2041 actagctcac acaacgtttg ctcgatgatc gcctgctcat cggggattaa gcgggtttcc
     2101 agttcaaacg gcgtggttag cgccgatgtc agccattctt ccagcgcagg gatgccttta
     2161 tcctgataaa cgccgctgga tgcgcgatca gagatggaaa ctaagccaat acgtaaagta
     2221 ttcatcaaga tttttccgtt taaacagtct cgttaaacag aatgatacac tgcgaaggga
     2281 gtgacagaca ggcttcagaa gaggtagcgt gaccgacttc ccggtcacgc taagaatgat
     2341 tacagcagat cgccgatcat tttttccagt ttttcctggt caatagcaaa cttacggata
     2401 ccttccgcca gtttatctac tgccattgga tcctggttgt gctgccacag gaactcggac
     2461 tcagtgatac gcgccggacg cgctttcact tcgccgatgt aagacagttt acgttcgata
     2521 gccccttcgc tctcagccag ctctttcagc agtgtaggtg cgatggtaag acggtcgcag
     2581 cctgccagtt ccagaatttc gccgatgtta cggaagcttg cgcccataac cacggtttca
     2641 taaccgtgct ctttgtagta ctggtagatt tcagatacag aaaccacgcc cggatcttct
     2701 gccggagcgt actctttctt atcagtattc gctttgtacc agtcaagaat acggccaaca
     2761 aatggcgaga tcaggaacac gcctgcttcc gcacaagcac gagcctgagc gaaggagaac
     2821 agcagggtca ggttacagtt gatgccttct ttttccagct gttctgcagc acggataccc
     2881 tgccaggtag aagccagttt gatcagaata cgatcgttgc taataccagc atcgttgtag
     2941 agtttgatca ggcgttttgc tttcgcaatt gacgcttcgg tgtcatagga aagacgcgca
     3001 tcaacttcag ttgagatacg acccggaacc agtttcagga tttccagacc aatatttact
     3061 gccagtttgt cggtcgcgtc cacgatctgc tgcgcgcgat cgttgctctg ctgtttcgcc
     3121 caggcgacag catcatcaat caacttacgg tattccggaa tctgcgctgc gttaagaatg
     3181 agagaagggt tggttgtggc atcctgcggt tgatacagct tcattgccgc gatgtcccca
     3241 gtgtcggcca ctacggtggt gtactgacga agggaggtca atttgtccgt catgatagta
     3301 tttctcttta aacagcttgt tagggggatg taaccggtct gccctgatga tatcacgacg
     3361 caacgtcagc gcaaccgccg acaagacggt tatcgccagg cgagactgtt tcggatttct
     3421 gacactgcgt tgatatcgcc cgccattttt atacaaaacc tcatgtatgc tacgcagaag
     3481 ttatcaagta cctcgtagcg tatatacttc ttaaacaatt ggtaacgttt acacaggaaa
     3541 gtcatcgcga ccggcaataa gagggatatg catgccagat tttttctcct ttattaacag
     3601 cgtcctttgg ggatcggtaa tgatttacct gctcttcggc gcaggttgtt ggttcacttt
     3661 tcgcaccgga tttgtgcagt ttcgctacat ccgccagttt ggcaaaagtc ttaaaaatag
     3721 cattcatcca cagccaggcg gtttaacctc atttcagtca ttgtgtacca gtcttgcggc
     3781 gcgcgtgggt agcggcaacc tggccggcgt tgcgctggct attaccgccg gtggacctag
     3841 agccgtcttt tggatgtggg ttgccgcgtt tatcggcatg gcgacctcgt ttgccgaatg
     3901 ttcccttgca caactttata aagaacgtga cgtcaatggg cagtttcgtg gcggaccggc
     3961 atggtatatg gcgcgcgggc tggggatgcg ttggatgggc gttctgttcg ccgtcttttt
     4021 gctcatcgcc tacggcataa ttttcagcgg agttcaggcg aacgccgttg cccgagccct
     4081 gagtttttct tttgattttc ccccgctggt gacaggcatt attctcgctg tctttgctct
     4141 gctggcaatc actcgcggtc ttcatggcgt cgcccggctc atgcaggggt ttgtcccgtt
     4201 gatggcgata atctgggtgc tgaccagcat ggtgatttgc gtaataaata tcgggcaact
     4261 tccccacgtc atttggtcta tttttgagag tgcttttggc tggcaggaag cggcaggcgg
     4321 cgcggcggga tataccttaa gccaggcgat tactaacggt tttcagcgca gtatgttttc
     4381 caatgaggcg ggaatgggtt cgacgccaaa cgcggcagcg gcagcggcgt cctggcctcc
     4441 gcatccggca gcgcaaggga ttgtccagat gattggcatt tttatcgaca ccctggtcat
     4501 ctgtacggca agcgccatgc tgatattact ggcgggtaac gacacaacct acatgccgct
     4561 ggaaggtatt cagcttatcc agaaggcgat gcgggtgcta atgggttcct ggggtgctga
     4621 gtttgttacc ctcgtggtta ttctgtttgc cttcagctcc atcgttgcca actacattta
     4681 tgccgaaaac aatctcttct ttttacgcct gaacacccct aaagcgatct ggtgtttgcg
     4741 gatctgcacc ttcgcaacgg tcatcggcgg caccttgcta agccttccgc tgatgtggca
     4801 actggcagat atcataatgg cctgcatggc tattaccaat ttgaccgcca ttttactgct
     4861 ctcgcctgtg gttcatacca ttgccagtga ttatctacgc cagcgtaaac tcggcgtgcg
     4921 cccggtgttt gatccgttgc gttatccgga tatcggtcgc cagctttctc cggacgcgtg
     4981 ggatgatgtt tcgcaggagt aatcacaact atcgatcaac tcattctctt tttttgctaa
     5041 agtcggcata aatttcctgc aaggactgga tatgctgatt cttatttcac ctgcgaaaac
     5101 gcttgattac caaagcccgt tgaccaccac gcgctatacg ctgccggagc tgttagacaa
     5161 ttcccagcag ttgatccatg aagcgcggaa actgacgcct ccgcagatta gcacgctgat
     5221 gcgcatcagc gacaaactgg cgggtatcaa cgccgctcgc tttcatgact ggcagccaga
     5281 tttcacgccg gcgaatgccc gccaggcgat tctggcgttt aaaggtgatg tctacaccgg
     5341 cttgcaggcc gaaaccttca gcgaagacga tttcgatttt gcccaacagc atttgcgaat
     5401 gctttccggc ttgtatggcg tactgcgccc gctcgattta atgcagcctt atcgtctgga
     5461 aatggggatc cgtcttgaga atgcccgagg gaaagatctg tatcaattct ggggagatat
     5521 catcaccaac aagctgaacg aggcgctcgc agcacaaggc gataatgtgg tgattaatct
     5581 ggcgtcagat gagtatttta aatcggtgaa gccgaagaaa ttgaatgccg agattatcaa
     5641 gccggtgttc ctcgatgaga agaacggcaa atttaagatc atcagcttct acgctaagaa
     5701 agcacgcggt ctgatgagtc gtttcattat tgaaaatcgg ctgaccaaac cagagcaact
     5761 gactggtttt aatagcgaag gttacttctt tgatgaagct tcctccagca atggcgaact
     5821 ggtgtttaaa cgctacgagc agcgttaagt ttgcagtcaa tgccggatgc ggcgtgaacg
     5881 ccttatccgg cctacaaaag catgcagatt caatatattg cagaattcac gtaggcctga
     5941 taagacgcgc cagcgtcgca tcaggcgctg aatgccggat tgttacccgg catttgtcat
     6001 ttagcggtga tgtttgcctg gaccatgacc gccgtgatga tcatgaggag ctttcttatg
     6061 gtggcgcggc ggtggcggcg gtccgtgtgg gtgccagcga ttgcctcgcc attcataatg
     6121 ttgtttccac cagccgtggt cgcgccagtg acctccatcc cagtaatagc cacgattatc
     6181 acgatcgcct atttgtaatt ttactgacgg gactaacgta atttccgcag cctgtgctgc
     6241 catgggagcg accagaacta gggaaagtgc gagtacgata gattgcatct ttttcacagg
     6301 ttactccttt tatcattgcc cgttatgggt cgatatccgg agattatgcg atgagaacga
     6361 cggttgttat tctccgcaat cctaatctct aagttaccgc atttattgag aatttctcct
     6421 ttttccctgt cgtttttctc cataatttcg tcataaaaaa gccgggctgc ataaaagcaa
     6481 acccggcctg attgagataa tgaatagatt ttactgatga ttcatcatca atttacgcaa
     6541 cgcagcaaaa tcggcgggca gattatgtga aagcaagggt aaatcagcac gttctgccag
     6601 ctcttttggc agatccaacg tttcaccgag aatcgcttcc acgctctctt taaatttcgc
     6661 cggatgcgcg gtgccgagga acaagccata ttcgcctgga ttcaactggt cacgcagcgc
     6721 acgatacgct acggcagcgt gcggctccga ggtgtagccc agttctttta actcacgcat
     6781 tgtctgttgc gtggtttcat catccacggc tgcataaccc agctctttca gttgccagat
     6841 tttgcggcgg aacaactctt ccacacgcgg ccagttgttc ggctgactca cgtccatcgc
     6901 gttggataac gtcgcctgag tcgctttggg tgaccactga ccgtcgtgca ggaaacgtgg
     6961 cacggtatcg ttcacgttgg tcgcagcaat aaaacgtttc accggcagac cgagtgactt
     7021 cgccagcaga cccgccgtca aatcgccgaa gtttccgctt ggcaccgaga caaccagctg
     7081 gttgcgcgct tcctgcggca gctgcgcaac tgcttcaaag tagtagcaaa tctgcgccag
     7141 caaacggctg atgttaatcg agttagctga gtttaacccc agcgccactt tcagctcttc
     7201 atcatcaaac gcctgcttca ccagcgcctg acaggcatcg aaatcgccgt cgatggcaac
     7261 agtttcgata ttgccgccca atgtacagaa cagtttttct tgcagtggac tgattttgcc
     7321 tcgtggatag aggataacca ctttcacatt cggtaaaccg tagaaagcat gagccactgc
     7381 cgctccggta tcaccggagg tcgcggtcag aatggtcact ggcttatcgc ccgcaatatg
     7441 ggtcagcatt tgtgccataa agcgaccgcc gaaatcttta aatgccagcg ttggcccgtg
     7501 gaacaattcc agacaaccga catcgctttc aacattggcg accggagccg ggaaggcaaa
     7561 cgccgcgcgc acgcgctctt ccaggatttc ctgcgggatt tcatcaccaa taaacgccga
     7621 gaggatcttc gcactgcggg tgacaaaatc cagcttcagc atctcatcaa tttcagtcag
     7681 gctgaattcc ggcaggtcgt gcggaaaaaa cagcccctga tttttgccca acccctgggt
     7741 tacggcttgc gcaaagctga cccgctcatt gtgatctttc agattgtaga gtttcattta
     7801 gttttccagt actcgtgcgc ccgccgtatc cagccggcaa atatgaacaa aaccttcctg
     7861 attttgcagg tagttcttac ccaaccagtc ggcaacgcgc tgggcggtat ccggcttgtc
     7921 acacagagcg aacaaggtcg ggccggagcc ggagataccg ctcgctaccg cgccgatttc
     7981 cgcaaccgcc tgccgcgcct gccggaagcc aggcagtaac cgttcacggt agggttcagc
     8041 gataacatct ttcatcagct tcgcggcaag ctcaggctga cgggaatagc aggcgtgaat
     8101 gaagccagcc agatgtcgcc cgtgcgcaat gcaatcctgg cggcgatact gcgccggtaa
     8161 aatagccctg gcttctgccg ttgagacttt aatccccgga tacgccagca cccacagcca
     8221 ctcatcaaac cctggcactt gctggctgat aatgtcgttt tcttcgatca tcaactgcat
     8281 accaccaaga aaacacggtg ccacgttgtc gtaatgaatg ctgccggaga ttcgtccttc
     8341 cagctcgccc atcaaagcca gcaaacgagt gtcattaagc ggcttgccac agtgttcatt
     8401 catcgccatc agcgccgcga ccaccgaaca ggcgctggag cctaagcccg aaccgattgg
     8461 catattcttt tccagagtca tcgccactgg aatttgcttg ccaagctcct ggcaaaaacg
     8521 ctcccagcac tgataaacga tattttcccg tggttctgac ggcagcttat cggcaaagcg
     8581 tccgaggttg ttgagactga atgtctctgc cgcctcaacc gtgactacat ctccgagcaa
     8641 tgcaccatca acaggtgtca ccgccgcccc gagcacatca aacccgacgc tcatattggc
     8701 actggaagcc ggggcataaa ctttaaccat gtcagactcc taacttccat gagagggtac
     8761 gtagcagatc ggcaaagaca ccggcagctg taacgtcatt gcccgcacca tatccgcgca
     8821 gcaccaacgg cagcggctga taatagtggc tataaaaggc cagggcgttt tcgccatttt
     8881 tcactttgaa cagcggatca ttaccatcca cttcggcaat cttcacgcgg caggcaccat
     8941 cttcatcaat attgccaaca tagcgcaaaa cttttccttc atcacgggcc ttcgccacgc
     9001 gcgcggcaaa gagatcgtcg agctgtgaca gattcgccat aaaagcggca acatcaccct
     9061 cagcgttaaa ctctgcgggc agcacaggtt caatttcaat atccgccagc tccagttcac
     9121 gtcccgtttc acgagcgaga atcaatagct tacgcgctac atccatacca gaaagatcat
     9181 ctcgcggatc cggttcggta taacccattt cccgcgccag agtagtcgcc tcggagaaac
     9241 tcatgccttc gtctaacttg ccgaagatat aagaaagcga acctgaaaga atgccggaga
     9301 acttcatcaa ttcatcacca gcattgagca gattttgcag gttctcaata accggtaatc
     9361 cagccccaac gttggtgtca tagaggaatt tacgccgcga tttttccgcc gcatgacgca
     9421 acagatggta gtaatccatc gacgaggtgt tggccttttt gttcggcgtg acaacgtgga
     9481 aaccttcgcg caagaagtcg gcatattgat ccgccactgc ctggctggag gtgcagtcaa
     9541 caatgaccgg gttcagcaga tgatattctt tcacgaggcg aattaagcgc ccgagattaa
     9601 acggctcttt ggcttgcgcc agttcttcct gccagttttc cagatttagg ccatgcacat
     9661 tggtgagcag tgccttcgag ttggcaacac cgcagacacg taagtcgata tgtttattct
     9721 tcagccagct ttgttgacgc ttcagttgct ccagcagcgc accgccaacg ccaccgacgc
     9781 caatcacaaa cacttcgata acctgatcgg tattgaacag catctgatga gtaacgcgca
     9841 cgccagtggt cgcatcatcg ttatttacca cgacagagat tgagcgttca gaagatccct
     9901 gagcaatggc gacaatgttg atattggcgc gggccagcgc ggcaaagaat ttcgccgaga
     9961 tcccacgcaa ggtgcgcata ccatcaccta ccaccgagat aatggccagc cgttccgtca
    10021 ccgccagcgg ctccagtaag ccttctttca gttccaggta gaactcttcc tgcattgccc
    10081 gttcagctcg cacacagtcg ctttgtggaa cgcagaaact gatactgtat tcggaagatg
    10141 attgcgtaat cagcaccacg gaaatacggg cgcgtgacat tgcagcaaag acgcgcgccg
    10201 ccatgccgac cattcctttc atccccggac cagaaacgct gaacattgcc atattattca
    10261 gattggaaat gcctttgacc ggtaattcgt cttcatcacg gctggcacca atgagcgtac
    10321 ctggtgcttg aggatttccg gtatttttaa tcaggcaagg gatctggaac tgggcgatgg
    10381 gggtaatggt gcgggggtga agaactttag cgccgaagta ggaaagctcc atcgcttcct
    10441 ggtaggacat cgacttcaac aacctcgcat cgggcacctg acgcgggtcg caggtataga
    10501 ccccgtcaac gtccgtccaa atctcgcaac aatcggcgcg taaacaggca gccagcaccg
    10561 ccgcggagta gtcggaaccg ttacgtccaa gtaccaccag ttcgcctttt tcattaccgg
    10621 aggtgaaacc tgccatcaac accatgtgat cagccggaat gcggcttgcc gcaatacggc
    10681 gggtggactc agcaatatcg acggtagatt cgaggtaatg ccccactgcc agcagttttt
    10741 cgaccggatc gataacggta acgttgtgac cacgcgcttc taacacgccg gccataatgg
    10801 cgatcgacat tttctcgcca cggcaaatca gcgcagcgtt gatgctatcc gggcactgcc
    10861 ccaacaaact aatgccatgc aggacatgtt ttatttgggc aaattcctga tcgacgaaag
    10921 ttttcaattg cgccagcggg aaccccggct gggcggcggc gagtcccgtc aaaagttcgg
    10981 caaaaatacg ttcggcatcg ctgatattgg gtaaagcatc ctggccgcta atggtttttt
    11041 caatcatcgc caccaggtgg ttggtgattt tggcgggggc agagaggacg gtggccacct
    11101 gcccctgcct ggcattgctt tccagaatat cggcaacacg cagaaaacgt tctgcatttg
    11161 ccactgatgt accgccgaac ttcaacactc gcatggttgt tacctcgtta cctttggtcg
    11221 aaaaaaaagc ccgcactgtc aggtgcgggc ttttttctgt gtttcctgta cgcgtcagcc
    11281 cgcaccgtta cctgtggtaa tggtgatggt ggtggtaatg gtggtgctaa tgcgtttcat
    11341 ggatgttgtg tactctgtaa tttttatctg tctgtgcgct atgcctatat tggttaaagt
    11401 atttagtgac ctaagtcaat aaaattttaa tttactcacg gcaggtaacc agttcagaaa
    11461 ctgctatcag acactctttt tttaatccac acagagacat attgcccgtt gcagtcagaa
    11521 tgaaaagctg aaaaatactt actaaggcgt tttttatttg gtgatatttt tttcaatatc
    11581 atgcagcaaa cggtgcaaca ttgccgtgtc tcgttgctct aaaagcccca ggcgttgttg
    11641 taaccagtcg accagtttta tgtcatctgc cactgccaga gtcgtcagca atgccatgac
    11701 tcgttcgcgt aaagcttgca gttgatgttg gtctgccgtt gtgtcacttt tcgtcggttg
    11761 ttgtattaat gttgctaatt gatagcaata gaccatcacc gcctgcccca gattgagcga
    11821 aggataatcc gccaccatcg gcacaccagt aagaacgtca gccaacgcta actcttcgtt
    11881 agtcagcccg gaatcttcgc gaccaaacac cagcgcggca tggctcatcc atgaagattt
    11941 ttcctctaac agcagcacca gttctactgg cgtggcgtag taatgatatt tcgcccgact
    12001 gcgcgcagtg gtggcgacag tgaaatcgac atcgtgtaac gattcaacca gtgtcggaaa
    12061 aactttaata ttatcaataa tatcaccaga tccatgtgcg acccagcgag tggctggctc
    12121 cagatgtgcc tgactatcga caatccgcag ttcgctaaaa cccatcgttt tcattgcccg
    12181 cgccgctgcc ccaatatttt ctgctctggc gggtgcgacc agaataatcg ttatacgcat
    12241 attgccactc ttcttgacca aatgaccgcg aacagggtga tcactgtcaa cttattacgc
    12301 ggtgcgaatt tacaaattct taacgtaagt cgcagaaaaa gccctttact tatcttaaaa
    12361 aaggctaaac tatttcctga ctgtactaac ggttgaattg ttaaaaaatg ctacatatcc
    12421 ttctgtttac ttaggataat tttataaaaa ataaatctcg acaattggat tcaccacgtt
    12481 tattagttgt atgatgcaac tagttggatt attaaaataa tgtgacgaaa gctagcattt
    12541 agatacgatg atttcatcaa actgttaacg tgctacaatt gaacttgata tatgtcaacg
    12601 aagcgtagtt ttattgggtg tccggcccct cttagcctgt tatgttgctg ttaaaatggt
    12661 taggatgaca gccgtttttg acactgtcgg gtcctgaggg aaagtaccca cgaccaagct
    12721 aatgatgttg ttgacgttga tggaaagtgc atcaagaacg caattacgta ctttagtcat
    12781 gttacgccga tcatgttaat ttgcagcatg catcaggcag gtcagggact tttgtacttc
    12841 ctgtttcgat ttagttggca atttaggtag caaacatgca gaccccgcac attcttatcg
    12901 ttgaagacga gttggtaaca cgcaacgcgt tgaaaagtat tttcgaagcg gaaggctatg
    12961 atgttttcga agcgacagat ggcgcggaaa tgcatcagat cctctctgaa tatgacatca
    13021 acctggtgat catggatatc aatctgccgg gtaagaacgg tcttctgtta gcgcgtgaac
    13081 tgcgcgagca ggcgaatgtt gcgttgatgt tcctgactgg ccgtgacaac gaagtcgata
    13141 aaattctcgg cctcgaaatc ggtgcagatg actacatcac caaaccgttc aacccgcgtg
    13201 aactgacgat tcgtgcacgc aacctgctgt cccgtaccat gaatctgggt actgtcagcg
    13261 aagaacgtcg tagcgttgaa agctacaagt tcaatggttg ggaactggac atcaacagcc
    13321 gttcgttgat cagccctgat ggcgagcagt acaagctgcc gcgcagcgag ttccgcgcca
    13381 tgcttcactt ctgtgaaaac ccaggcaaaa ttcagtctcg tgctgaactg ctgaagaaaa
    13441 tgaccggccg tgagctgaaa ccacacgacc gtactgtaga cgtgacgatc cgccgtattc
    13501 gtaaacattt cgaatctacg ccggatacgc cggaaatcat cgccaccatc cacggtgaag
    13561 gttatcgctt ctgtggtgat ctggaagatt aatcggcttt accaccgtca aaaaaaacgg
    13621 cgctttttag cgccgttttt atttttcaac cttatttcca gatacgtaat tgatcgtcca
    13681 ttgtaacttc tttactggct ttcattttcg gcagtgaaaa cgcataccag tcgatattac
    13741 gagtcacaaa catcatgccg gccagcgcca ccaccagcac actggttccc aacaacagcg
    13801 cgctatcggc agagttgagc agtccccaca tcacaccatc cagcaacaac agcgcgaggg
    13861 taaacaacat gctgttgcgc caacctttca ataccgcctg caaataaata ccgttcatta
    13921 acgccccaat cagactggcg attatccatg ccacggtaaa accgatatgt tcagaaagcg
    13981 ccagcaagag caaataaaac atcaccaatg aaagccccac cagcaaatat tgcattgggt
    14041 gtaaacgttg cgcggtgagc gtttcaaaaa caaagaacgc cataaaagtc agtgcaatca
    14101 gcagaatggc gtacttagtc gcccggtccg ttaattggta ttgatcggct ggcgtcgtca
    14161 ctgcgacgct aaacgcgggg aagttttccc agccggtatc attgcctgaa gcaaaacgct
    14221 caccgagatt attagcaaac cagctgcttt gccattgcgc ctgaaaacct gactcgctaa
    14281 cttcccgttt ggctggtaga aaatcaccta aaaaactggg atgcggccag ttgctggtta
    14341 aggtcatttc gctattacgc ccggcaggca ccacagaaag atcgccggta ccgcttaaat
    14401 tcagtgccat attcagctgc aggttctgct tccgccagtc cccttcgggt aaagggatat
    14461 gcacgccctg cccgccttgc tctaacccgg taccgggttc aatggtcagt gccgttccgt
    14521 taacttcagg cgctttcacc acaccaatac cacgcgcatc cccgacgcta atcacaataa
    14581 agggcttgcc taagatgata tttggcgcgt tgagctcgct aagacgcgaa acatcgaaat
    14641 cggcttttag cgttaaatca ctgtgccaga cctgaccggt ataaatccct atcttgcgtt
    14701 cttccacgtt ctgattgcca tcaaccatca atgactcagg taaccaaaaa tggataaaac
    14761 ttcgtttccg ctccacggtt ttatcctctt cctgcaccgt ataaagctcg gtcacaggaa
    14821 tagcgataag cggcctaacg agtttttgcg gcccgctggt actttggcga atcgcatctt
    14881 ccacatcgct acggtaatcg gcacgttcga caatcacttg ccgaatcagc attatcggaa
    14941 tcaacaacag caatactgca ccaaacaagg tggtcatttt ccagaacagg ggggatttca
    15001 acatagtctt ctcctttgca atggcagcag gatacgaagg ctatgtggga agaatttgaa
    15061 gctatgtgaa gtgacggtga agtcgaagcg aggccagcac gccaccttcc tgcacgttgc
    15121 gcagcgtgac ttcgccgtta aacaaacggg cgacctcact gacgaacgcc aaccccagac
    15181 cgctgctttt ttgcccattt gcacgcggca aagagtaaaa gcgttcaaaa atacgtgaca
    15241 gcgcgtagtc aggaatacca ctaccggtat ccagcacctt aagggcgacg tgttcctgat
    15301 ccacttcggc gcttagcgtt atgcgaccgc tctcgggggt aaaatcgatg gcgttatcca
    15361 gtaaattccc cagcgcctgc tccagtaacg ccggttcagc agcaacatta acctcagtgg
    15421 gcataacatg tagagtgatg tttttttctg ccaactgcac ggtgcgcgct tcgctgacgc
    15481 ggcgaaataa tgccgccaca tcaacaacag tcagaacgac ttcctgacga ttctccagtc
    15541 ttgcctggcg tagtaacgtt tctaccaatg cctgcatacg cgcattttgc gtcagaatgt
    15601 tgtcggtaaa acgagccacc acttccggtg gcggaccttc gcgtaaaatt tccgccgcgc
    15661 cacgaatcgc cgccagtggg ctttttagct catgggttaa cgcataaaca tactgctcaa
    15721 tatagttttt cccttccagc ttcacgcgca tactttccag cgcctgcgca agcttacgca
    15781 actcgctact gccgagttca ggaagaggaa cgggcttatt gtcagtgacg gaatcggcat
    15841 agcgagtgag ccgggcaatg gagcggttga tccaccaaac catgcctgcg ccaatcacca
    15901 gtgcaatccc cagcaaaatg gcgctggccc ataaaattcg ccgctcgcta cgcttaatga
    15961 ccggagccat cgccgcgttc ggtttgccta cgctcaaaac gccaataagc cgcgagccgt
    16021 ccataatcgg cgcggcaaca tacatcaccg aactttcggg atcggcagga ttttgcaacg
    16081 tgctgcgcgc accatactga ccacgcaacg ttagccagac gtcattccag cgcgaataat
    16141 cctgcccaac ggctttattt gccgaatcga acaatacttt accctgcgaa tcggtcatat
    16201 agacatgata ttcattgcgc actttgttaa tgccaccgat attggcgcga aacggacgat
    16261 gttgtagctg attaaacgcc tgcgccagtt gcccatgcgt tgggtcccca gagagcaaat
    16321 cgggacgcgc cagctccgcc agcaacgttg cggtgtcgat caacgtcccc tccgttgctc
    16381 ttcgcacgcc cggtttaact tctttgacaa aaatagccag tacgaaccag gccgccaccg
    16441 ccaccagtaa aaaatagccc agcagcaacc gcatgccgat acgcattaca ggcccctcag
    16501 gctatatccc atgccgcgat gagtattaat cggtgaaaga tcggggttga tggcacgcag
    16561 cttggcatgc aacgttttaa tgtgggtatc aacggtgcga tcgtaggtgt cctgcgcatc
    16621 ttcccacacg ctatccatca gttgctggcg ggaccagacg cggcctggcg acttgagtaa
    16681 cgtcttcagc aataaaaact cataccgcgt cagcgttaat ggcgtgtcaa accagctgat
    16741 ctgcgccgcg ggttcattca attcaaaatg accaatacgg atgacgggag acggcgacga
    16801 gaacttcttc acccgacgca gtaaggtgcg caccctggcg cacacttcgc ggggtgaaaa
    16861 cggtttagcc acatagtcgt cagcgccaat ttccagccca agcaggcgat cgacctcttc
    16921 acttcgggcc gtcaggaaca gtacaggtaa cgccggatgg agcgccagta actggctgca
    16981 caattcaaag ccgctgatat caggcaaacc aacgtcgaga atcatgacgt cgggaaccag
    17041 ctggcgagct ttatccagca ccggcaagcc tcgctcaaag acctcgacgg caaaaccttc
    17101 ctgctgcaac atgtagacca gcgtgtcggc tatcccttgc tcatcttcca ctaaccagac
    17161 cgtttcccgt tgtataaatc gcctctgtta ttgccgccac ggcatgacag gaaccgcgct
    17221 aatcgcgttt ttcggcgaac cttctacaac tttgtcggag taagccagat aagcgagcgc
    17281 gttgcgtttg gcgtcataaa agcgcacgac ctgtaacgac ttaaagacca gggacgtgcg
    17341 ttttttgaat actacctcgc cctgagcttt gccgttttta atacgatccg acagttcaat
    17401 cggcccgact tgctgacaag aaatagccgc atcggaggta tcttccgcca gacccaatcc
    17461 ccctttaata ccacctgttt tcgcccggct cacataacag gtgacatttt tcacatcggg
    17521 atcgtcaaag gcttccacaa caattttgtg atccgggccg atcattttaa atacggtgtc
    17581 gaccgaacca atctcttctg catgagccaa tggccccagc attatcaggc ttaaagacag
    17641 gatcaaatgc ttgtatttca tattgttacc atttttatct attacacgag caattagttc
    17701 gtcacggtaa ataacatatt gattaagaac aaaatctcaa tacttttatt tccgtcaagc
    17761 cctaaaacat actctactaa gaaaaaaaca ctgaatgcta aaacagcaaa aaatgctatt
    17821 atccaattac ctgatgtcag gtgctcgttg ttgaaaggat gaggatattt tatggatcag
    17881 gccggcatta ttcgcgacct tttaatctgg ctggaaggtc atctggatca gcccctgtcg
    17941 ctcgacaatg tagcggcgaa agcaggttat tccaagtggc acttacagag aatgtttaaa
    18001 gatgtcactg gccatgctat tggcgcgtat attcgtgctc gtcgtttgtc gaaatcggcg
    18061 gtcgcactac gcctgactgc gcgtccgatt ctggacatcg cgctgcaata ccgcttcgac
    18121 tctcaacaga catttacccg cgcattcaag aagcagtttg cccagactcc tgcactttac
    18181 cgccgttctc ctgaatggag cgcctttggt attcgcccgc cgctacgtct gggtgaattc
    18241 acaatgccag agcacaaatt tgtcaccctg gaagatacgc cgctgattgg tgttacccag
    18301 agctactcct gttcgctgga gcaaatctct gatttccgcc atgaaatgcg ttatcagttc
    18361 tggcacgatt ttctcggcaa cgcgccgacc attccgccag tgctctacgg cctgaatgaa
    18421 acgcgtccga gtcaggataa agacgacgaa caagaggtat tctataccac cgcgttagcc
    18481 caggatcagg cagatggcta tgtactgacg gggcatccgg tgatgctgca gggcggcgaa
    18541 tatgtgatgt ttacctatga aggtctggga accggcgtgc aggagtttat cctgacggta
    18601 tacggaacgt gcatgccaat gctcaacctg acgcgccgta aaggtcagga tattgagcga
    18661 tactacccgg cagaagacgc caaagcggga gatcgcccaa ttaatctgcg ctgtgaactg
    18721 ctgattccta tccgccgtta acgctgcagc tcatctaatg caggggcgtc cagatgcgag
    18781 atgtcccctg cggtttcaac gacccagcca gacgccagcc acaggctttc ctgataatcc
    18841 acgcgcgaaa tagaacagtt acgcagacgt aagcggcgcg ctgcccatgc tggtaatccg
    18901 agaatcgtac tcaccagaca tcccagtgca ataccatggc tcaccagcag cggtcggctt
    18961 ccctgcggta agtcccggca agattccagt gccgcattga cgcgatcgct gagctcctgc
    19021 attgactcgc cttcaggaat acgcccgtca acggtgccat tgaccagctg ccgacgccag
    19081 ttctcttctt cttcggtcag agaatcgata tgtctttttt ccagcacacc catgtttaat
    19141 tcacgcaggc gagaatcaaa gatgatgtca cagccgcagg cctgggcgat gatttccgcc
    19201 gtacgccggg tgcgtcctaa atcgctactg ataatatgcg taatgccaag ctctttggca
    19261 cgggttgcca cctgcatcgc ctgttgctca cctttggcgg tcagcgggct gtcagactgg
    19321 ccctgaatac gtcgctcggc gttccactgc gtttcaccgt ggcggactag gtatacctgt
    19381 aacatgcttt ttttccgtat actgctgtaa cgttaatttt ctgagtaatg ctgattatgc
    19441 accaagttgt ctgtgcgacc accaatcccg ctaaaattca ggccattctg caggcatttc
    19501 acgagatctt cggcgaagaa tcctgccata ttgcatccgt tgccgtcgag agcggtgtac
    19561 cggaacagcc ctttggcagt gaggaaacgc gcgctggcgc acgaaatcgg gtagcaaatg
    19621 cccgccgttt acttccagag gctgattttt gggtggcgat tgaagctggc atcgatggtg
    19681 acagcacttt cagttgggtg gtgattgaaa acaccagcca gcgcggcgag gcgcgttcgg
    19741 ctactttgcc gttacctgcg gtgattctgc agaaagtgcg tgaaggtgag gcgcttggtc
    19801 ccgtgatgtc gcgttatacc ggtattgatg agattggtcg taaggaaggg gcgatcggcg
    19861 tgtttaccgc cgggaaactc actcgcgcca gcgtctatca ccaggcggtg atcctggcgc
    19921 tgagtccgtt tcacaatgcc gtgtatcagg cattgtagga cggataaggc gttcacgccg
    19981 catccggcat tcggtgcacg atgcctgatg cgacgctgcc gcgtcttatc aggcctacaa
    20041 aatcaatcgc ttttcagcaa cacctcttcc agccactggc gcagctccac gggcgcggct
    20101 ttcaggctgt tagatccacg cgtaatcgtc gcgatgcccg cgccgagttc attttttaac
    20161 tcacgctgac tcatttcgcc acgcaacagc tcttcgacaa tacgcacgcg agtccccaac
    20221 gcttcgcgct catctggcgt cagcatcagg tttaacaacg gtaaatggag atcgttttgg
    20281 taggcattct taagcaggtc gacaaaacgt aaccactcct ggtgacgctg ttctgccatc
    20341 gctgctgaat agggtgattg ttgggccata atatgtcgcc attgttagcg ggggaagcaa
    20401 aatgcctccc ccggttgtac tcgctaaaga gtacgatagc atatcataaa cgtgcggatc
    20461 agtaacgacg tccccattcc gtggcgctca tcaacgtcgg tttatccccc atgaaataac
    20521 ggtagtaagc gtcataagcc agcacgttct tcacataacc gcgcgtctcg gagaacggaa
    20581 tactctcgac aaatgccaca gcgtcgatac gcccggcgct gttgccaagc caggttcgca
    20641 cccgtccagg tccggcgtta taagctgctg aggagaaaat acggttattg ccaaactgct
    20701 gataaacata ttgcaggtaa ctggtgccaa tgttgatatt cgtttccgga tccagcaatt
    20761 gcccagggct gctataacca ggaatagaga acatcttcac cgtatgggtc gctgtaccag
    20821 gcataatctg catcaggccg ctggccccta ccggtgattt cactttcgga ttccaggcgc
    20881 tctcctgacg ggcaatcgcc atcgcatagc tttgcgggat ctctttccca ctggtgtaac
    20941 gtttgaaaag atcgttgtaa gccagcggga atcgctcttc cagatgatcc caaagcttcc
    21001 cggcgatcgt tgcctgaacg ctaagatccc accattggtt attgaaagca taccgagcca
    21061 gttgagcctg ctctgttttt gacttgctct tcaccagatt ggcccactcg ctacgcgcgg
    21121 tgttatcgag attccagtac atcaactcgc gcacgcgcgc catctccggc ccctgagtca
    21181 gggcgctgtc aacattctgc ggcgctttat caatcttcag ctcatactct tctccgatgc
    21241 gttgtgctgc aaccatcggg tagaaaccac gctgttgcat gagttgatgc aaaatctctt
    21301 tcgcttcagc ttcacgtccg cgttccagca ataaatccgc ctgccagtaa cgccattcat
    21361 ctttctcttt tgcttccatc ggcagacgcg ccagccaggt attcaggccg cgacgatcgc
    21421 cggtgccaag tgccattcgc acacggcgtt caatcaacga cgtggattgc gagcgcataa
    21481 tggcgtcatc gcgccatttc gcctgctcgt cggtgacatc gttgcccatc aaacgccagg
    21541 cgacgatatc gcgcagctcc tgaatctgat cttcattaag ctgctgcgcc tgggcaagcg
    21601 acgggatcat cagccgtgca ttttcagcat cctgccgcgc cacactggca aacgccaccg
    21661 ctgctatttg acgggtaaaa tcggtcgctc cggttgtacg cgcgaaggtc agtaccgtat
    21721 tagggttgtt cgccagtgaa atgattgccg aggcgatagt ctggtaatcg gcaggcatct
    21781 gccctgccag cactgttacc aggccagtgt tacccgcttt catcgccaga cggatacgct
    21841 ctaaatacgc cagcggatct tgtttacctg acgcacgcca gacgctaaat aacttgtcac
    21901 aggcgttagg ctggctcttg ccggttagcc acagctcttt cgccccttgc caggcttctt
    21961 cactctgccc ggtgttccat ttcgcatagt agtaattaca ttgcgcttcg gtagttccgg
    22021 gcttttccgg gctaaaggct aacaagccac gccagtcttc acgccgcgcc agttcattga
    22081 cgaaacgaga ttgcagcgtg cgagcgggag gaagcgtggg gttagcgcga acaaagttag
    22141 tgaccgtcac cgccggttga ttcatcagat catcggtgat ctggcggtat tccaggtagg
    22201 gataaagcgg ataatccttc agtccaggca tcatttgttc gaccacatcc atttgtcgat
    22261 tatcccaggc ctgcttgatt tgcgcgtaac ggctacgctg ctcatccagt gagtcggctc
    22321 gcgccacgct gctgaccgtc agcagacaga caccggcagc caacagccgc caggtaactt
    22381 gtttggcttt ttccacaagc gcatcctcta agtgtaaata catcaatgca gcgtcatgcc
    22441 gcgtaataga tttatgctaa ccagtcattg ccgtttacgc cacgttacgg acactttttt
    22501 acttttactg cgaagatgat cgaccaactg ggattaggcg gggaaaaagg ctacacttcg
    22561 cctttgaaaa ctcatcatca cgataaacat agaggcgaag tccaacgtgg ctcaattcgt
    22621 ttataccatg catcgtgtcg gcaaagttgt tccgccgaaa cgtcatattt tgaaaaacat
    22681 ctctctgagt ttcttccctg gggcaaaaat tggtgtcctg ggtctgaacg gcgcgggtaa
    22741 gtctaccctg ctgcgcatta tggcgggcat tgataaagac atcgaaggtg aagcgcgtcc
    22801 gcagccagac atcaagattg gttacctgcc gcaggaagcg cagctgaacc cggaacacac
    22861 cgtgcgtgag tccattgaag aagcggtttc tgaagtggtt aacgccctga aacgcctgga
    22921 tgaagtgtat gcgctgtacg ccgatccgga tgccgatttt gacaagctgg ccgctgaaca
    22981 aggccgtctg gaagagatca ttcaggctca cgacggtcat aacctgaacg tacagctgga
    23041 gcgtgcggcg gatgcgctac gtctgccgga ctgggacgcg aaaatcgcta acctctccgg
    23101 tggtgagcgt cgtcgcgtag cgttgtgccg cctgctgctg gaaaaaccag acatgctgct
    23161 gctcgacgaa ccgaccaacc acctggatgc cgaatccgtg gcctggctgg aacgcttcct
    23221 gcacgacttc gagggcaccg tggtggcgat tacccacgac cgttacttcc tcgataacgt
    23281 tgcaggctgg atcctcgaac ttgaccgcgg tgaaggtatt ccgtgggaag gcaactactc
    23341 ctcctggctg gagcagaaag atcagcgcct ggcgcaggaa gcttcacaag aagcggcgcg
    23401 tcgtaagtcg atcgagaaag agctggagtg ggtacgtcag ggaactaaag gccgccagtc
    23461 gaaaggtaaa gcacgtctgg cacgctttga agagctgaac agcaccgaat atcagaaacg
    23521 taacgaaacc aacgaactgt ttattccacc tggaccgcgt ctgggcgata aagtgctgga
    23581 agtcagcaac ctgcgtaaat cctacggtga tcgcctgctg attgatgacc tgagcttctc
    23641 gatcccgaaa ggggcaatcg tcgggatcat cggtccgaac ggcgcgggta aatcgaccct
    23701 gttccgtatg atctctggtc aggaacagcc ggacagcggc accatcactt taggtgaaac
    23761 ggtgaaactg gcatcggttg atcagttccg tgactcaatg gataacagca aaaccgtttg
    23821 ggaagaagtt tccggcgggc tggatattat gaagatcggc aacaccgaga tgccaagccg
    23881 cgcctacgtt ggccgcttta actttaaagg ggttgatcag ggtaaacgcg ttggtgaact
    23941 ttccggtggt gagcgcggtc gtctgcatct ggcgaagctg ctgcaggttg gcggcaacat
    24001 gctgctgctc gacgaaccaa ccaacgacct ggatatcgaa accctgcgcg cgctggaaaa
    24061 cgccctgctg gagttcccgg gctgtgcgat ggttatctcg cacgaccgtt ggttcctcga
    24121 ccgtatcgcc acgcacatcc tggactacca ggatgaaggt aaagttgagt tcttcgaagg
    24181 taactttact gagtacgaag agtacaagaa acgcacgctg ggcgcagacg cactggagcc
    24241 gaagcgtatc aagtacaagc gtattgcgaa gtaatgcgta aaatgccgga tgcggcgtga
    24301 acgccttatc cggcctacaa accaagaaat ttcaatacgt tgtgaatctc caggcctgat
    24361 aagacgcggt aagcgtcgca tcaggcattg agcaccgaat gccggatacg gcgtgaacgc
    24421 cttttccggc ctacaatagc cttagtatcc gcaatttcgt agcgggtcac ccgtgctgat
    24481 tcttttaaac cttgtttaat ctcgacagcc tcttccagag aggttttcaa ctcatcaaaa
    24541 aacttatttt atacctcgcc tttgagccgt ttcatcgcgg ttatctctgc tcccccatca
    24601 tctcccgcac cagctccacg cagcgcagga aacggctgtc ataatcgtcc tcttcaaccc
    24661 gcacgaattc gatattgttc tcttccagca tctccaccag caagttctgg aactctttgc
    24721 gatccaccga actgccgagg ctgcgtaaac catccgccac ccacggcgtg ttgttctcca
    24781 gcaggatcac cagatcgaaa cggtattcat caatcaacgc ctgtacgaac ggatgctcac
    24841 gcccttcgta ctttttgcag aacgcctggg tagtgacaaa atcagtgtca ataaacgcca
    24901 ctttattggc atatttcact gcaaaatcaa tgtattgtgc gtggcccagc gcgattttat
    24961 cgtaatcgga atactgcaat gcgatctcat caccgccgag gtgtgaaaag acataatcgc
    25021 gaccatattc ccacgcactg gtggtattga agatattggc aagtttgttt accagggtgg
    25081 atttaccgct cgactcgcca ccaaggatcg ccacggtacg tacaaagaac ggcttcactt
    25141 ccgtaggaat atattcccag tagcggaacg ggttttcgcg gatctgcgca ccgctgatac
    25201 tcataaaggt acgtttcgga tcgaccagca ccgtatcgat ccccagatgt tccatatact
    25261 gtggcgcatc ggcttcttcc gaggtgtaga tcaggtccgg ctgaatcccc ttttcagcca
    25321 taaacttttt gatgccgttg ctccacacat cccagccgtg cggatacggc tccatgccct
    25381 cttcgttgaa agcatgaatg cgaatatttt tctgatattt aaaagtttgt aataaccagc
    25441 gcagacgatc cggcaccgtg ggctgctgcg acatggcgct gtcttcaaac aacgcgcggt
    25501 cgcgggtatc gtcaaaaccc ataatgatat gcagctcgtc aacctggcta caggcgcgct
    25561 ggataaggta gatatgtccg gtatgcagcg ggtagaactt accgaatacg acaccaatgg
    25621 ttttcttctg tcggggaaat tcaagcccca aaaaacggtg caacgcctcc agcttttgcg
    25681 cgctggggct tttaattttg gcattcagta actggcttaa ataccctttg gtcataccgc
    25741 tggcatcagc tacctgctgt agcgtgcagc cctgttgctt gatggcagtt ttcaggtaat
    25801 caaatgacga catatctccc tccgtatctc tcattataag tcgtcgaaca cgctaagcgc
    25861 gtcggagagt tttttaacgc caaaaatctg catcccttcc ggcgcttttt tcggtacgtt
    25921 agccgccgga acaatcgccc ggcgaaaacc gtgtttcgcc gcttctgaaa ttcgttcctg
    25981 accgctgggc accgggcgga tctcccctgc cagcccgact tcaccaaaca ccaccagatc
    26041 ctgtggcagc ggtctgtcac gcaggctgga aaccatcgcc agcagtaacg ctaaatcggc
    26101 actggtttcg gttaccttca cgccgccgac cacgttcaca aatacatcct gatcggccat
    26161 ttgcagacca ccgtgacggt gcaagacagc cagcaggatt gccagacggt tttgttccag
    26221 ccctactgcc acgcggcgcg gattcgccat catcgagtga tcgaccagcg cctgaatctc
    26281 caccagcaac ggacgcgttc cttcccacac caccatcacg gagctgccgg aggtcacttc
    26341 atctccgcga cttaagaaaa ttgccgaagg gttgctgact tcacgcagcc cctgttcggt
    26401 catcgcgaag acgcccagct cattcaccgc gccgaagcgg tttttatggc tgcgcaaggt
    26461 gcgaaaacgg gagtcggcat caccatccag aagcaccgaa cagtcgatac agtgttccag
    26521 cactttaggg ccagccagcg agccatcttt ggttacgtgc ccaaccatga caatcgccac
    26581 accgcgcgtt ttggcgaagc gcgtcagata agccgccgtt tcacgcacct gcgccacgct
    26641 accaggcgat gattgtacat ccgccatatg catcacctgg atcgagtcaa ttaccatcag
    26701 tttcggttgc tcttcttcgg caatcaggca gatctgttcg atgctggttt ccgacaacat
    26761 attgagattg tcagtcggca ggccaaggcg atgagcgcgc attgccacct gttgcagcga
    26821 ctcttcgcca gtgacataca gcgttttcat ctgctgggcc agtttgcaca gcgtttgcag
    26881 tagcagcgtg gatttccccg cacctgggtt accgccaatc agaatggcgc ttcccggcac
    26941 cacgccgccg cctagtacgc ggtcgaactc tttaaatccg gtggaaaaac gcggcagctc
    27001 ttcaaggctg atatcggaga gtttctggac ttttgccacc ccggcgctac cggcatagcc
    27061 gctgagacgc tcgttacgcg ccaccgttgg cgacgcagca agacgcacct cggtgatggt
    27121 gttccaggca tgacaggcac tgcactgccc ctgccagcgc ggataatcgg ccccgcattc
    27181 attacaaaca aaggcgcgtt ttggagcttt tgccacggtg tacctcgtta atgctgtgcc
    27241 gcccgcagga tggcgggcga gcaattactt ctgattcagg ctgccagaga ggatgcagaa
    27301 tacccccatc aggtcagcgt gacggatggt gacttccgcc ttttcattca cttttggctt
    27361 ggcatggtag gcaatcccca gccctgctgc tttgatcatc ggcaggtcat tagctccatc
    27421 gccaatcgcc acggtctgcg ccagcgggat ttcatactcc tgcgcgaggc gagtcaaagt
    27481 tttcgctttg tactgcgcgt ctacgatgtc gccgatcaca ttgccggtaa atttaccgtc
    27541 catgatctcc agttcattgg ctaccacggc ggtcaggcgc agcttgtcgc gcagatattc
    27601 agcaaagaaa gtaaagccgc cggaggcaat cgccactttc cagcccagcg tttccagctt
    27661 gagcaccagt tgcgttaagc ctggcatcag cggcagattt tcacgcacct gttgcagaat
    27721 attggcgtca gcgcctttca gcgtcgccac acggctgcgc aggctggcgg taaaatcgag
    27781 ttcgccgcgc atcgcccgtt cggttacttc cgccaccatc tcgcccgttc cggccagttt
    27841 ggcaatttca tcaatacatt caatctggat ggcggtggaa tccatgtcca tcaccagcaa
    27901 acccggcgtg cgcaggtgcg ggattttccc cagcggggcg acatccagtt gcgcttcatg
    27961 ggccaggcgc gtagcccgtg cggtgagtga acctgccaga cgaatcacct gataatcttc
    28021 cacgcaccag gcggcaacaa tcaccatcgc cgcacccagt ttgctctggt attgggtcag
    28081 acgctgttta tccagcccac gaccatacag cagccagccg ctacgacctg cgtggtaatc
    28141 cagtggcatc acttcatcac cacttaatga aagaggcaga ccaggccata aagagacatc
    28201 ttcaggcagg tcgcaccagg taatgttagg cattaaggct cctgtaaaat cgttcgaagc
    28261 agggaaaata acgcatgagg ctaccttgta tccattgctt ctggcaacat taagtctcaa
    28321 attttcaaag ggtggaagat ggctcgcaca aaactgaaat tccggctgca tcgggcagtg
    28381 attgtcctgt tctgtcttgc cttgttagtg gcgctgatgc agggagcgtc atggtttagt
    28441 caaaaccacc agcgacaacg taatccacag ctggaagaac tggcccgcac cctggcgcgt
    28501 caggtaacgc tgaacgttgc accgctgatg cgtaccgact caccggatga aaaacgcatt
    28561 caggcgatcc tcgatcagtt aacggatgaa agccgtatcc tcgacgcggg tgtgtatgac
    28621 gaacaaggcg atcttatcgc acgttctggc gaaagcgtcg aagtgcgcga ccggctggcg
    28681 ctcgacggta aaaaagcggg cggctatttt aaccagcaga ttgtcgaacc aattgccggg
    28741 aaaaacggac cgctcggcta tctgcgcctg acgctcgaca cccatacgct cgccaccgaa
    28801 gcccaacagg tggataacac cactaacatt ttacgcctga tgttgctgct ttcactggca
    28861 atcggcgtag tgctgacccg cacgctgcta cagggtaaac gtacccactg gcagcaatcg
    28921 cccttcctgt taaccgccag caaaccggtg ccggaagagg aagaaagcga gaaaaaagag
    28981 tgacccatta ctacaagaaa ggaaatcgtt atgtccacat tacgcctgct catctctgac
    29041 tcttacgacc cgtggtttaa cctggcggtg gaggagtgta tttttcgcca gatgcccgcc
    29101 acgcagcgcg ttctgtttct ctggcgcaat gccgacacgg tagtgattgg tcgcgcgcag
    29161 aacccgtgga aagagtgtaa tacccggcgg atggaagaag ataacgtccg cctggcacgg
    29221 cgcagtagcg gtggcggcgc ggtgttccac gatctcggca atacctgctt tacctttatg
    29281 gctggcaagc cggagtacga taaaaccatc tccacgtcga ttgtgctcaa tgcgctgaac
    29341 gcgcttggcg tcagcgccga agcgtccggg cgtaacgatc tggtggtgaa aaccgccgaa
    29401 ggcgaccgca aagtctcagg atcggcctat cgcgaaacca aagatcgtgg cttccaccac
    29461 ggcaccttgc tgctcaatgc cgaccttagc cgcctggcaa actatctcaa tccggataaa
    29521 aagaaactgg cggcgaaagg cattacctca gtgcgttccc gcgtgaccaa cctcaccgag
    29581 ctgctgccag ggatcaccca tgagcaggtt tgcgaggcca taaccaaggc ctttttcgcc
    29641 cattatggcg agcgtgtaga agcggaaatc atctccccgg acaaaacgcc agacttgcca
    29701 aacttcgccg aaatctttgc ccgtcagagt agctgggaat ggaacttcgg tcaggctccg
    29761 gcattctcgc atctgctgga tgaacgcttt agctggggcg gcgtggaact gcatttcgac
    29821 gttgaaaaag gccatatcac ccgcgcccag gtgtttaccg acagcctcaa ccccgcgccg
    29881 ctggaagccc tcgccgggcg actgcaaggc tgcctgtacc gcgcggatat gctgcaacaa
    29941 gagtgcgaag cgctgttggt tgacttcccg gaccaggaaa aagagctacg ggagttgtcg
    30001 acgtggatag cgggggcggt aaggtaactc gctgattaaa atacaaaagg aagggaatat
    30061 gatcgatctg gaaaaccagg agcgggagat tatcaattta atgttaagcc agcgtatttc
    30121 ctggctagcc gccgtgcgta tcaggcataa attatcgctt gctgaagtaa gtaaaatgtt
    30181 aggtatctcg attaattctc taaaatagat cgaaaagacg gaacggttta gctcaaacat
    30241 caaaagcaaa atggcagaaa tttatggttg tccaccagag ttgctgatat gcccttcctg
    30301 gatgacggct gaacataaat gaatagattc gtgaatagat acttgaatag attttatttt
    30361 ctatccatat gaaaaataat agtaaatcta taaatcagtt gctattgatg aatagatact
    30421 aaaaagccgg agcagtctcc cactccggct tcacacgaca atcgcctttc agcgaaacac
    30481 aattactctt tatcgcccag cagaacggat tccagtgcga ttttgatcat gtcgttgaag
    30541 gtggtctgac gctcagcggc agtggtctgc tcgtgagtgc ggatgtggtc agacacggta
    30601 cagatggtca gggctttcgc gccaaattct gcagcgacgc cgtagatacc agccgcttcc
    30661 atttccacgc cgaggatgcc gtatttttcc atcacgtcga acatttcgcc gtccggagag
    30721 tagaacaggt cagcggagaa caggttacca acgcgagcat caatgcccag tgctttagcc
    30781 gcgtctaccg cgttacgcac catgtcaaag tcagcgatag cggcaaagtc atgatcttta
    30841 aaacggatgc ggttaacttt ggaatcggtg caggcaccca taccgataac gacgtcgcgc
    30901 agttttacgt gcggcagaac tgcgccacag gaacccacgc ggataatttt cttcacgccg
    30961 aaatcggtga tcagttcttt ggtgtagatg gagcaggacg ggatacccat accgtgaccc
    31021 attacggaaa ttttgcggcc tttgtaagta ccggtgaagc ccagcatacc gcgaacgttg
    31081 ttcacttcac gggcatcttc aaggaaagtt tcagcaatat acttcgcacg cagcgggtcg
    31141 cctggcatca aaactacgtc agcgaaatcg cccatttctg cattaatgtg tggggtagcc
    31201 attgttttat ccttatcaac atgttttcac cctctccctg tgggagaggg ccggggtgag
    31261 ggcatcaagc cgcacccatt atcagaacat ggctttgcca tattccatat cagaagtacc
    31321 aaaatatttt gccagagtct ggccgatatc cgcgaaggtt tcacggtgac ccagtgaacc
    31381 cggttttact ttcgggccgt aaaccagtac cggaatgtgt tcacgcgtgt ggtcagtacc
    31441 ggtccaggtc ggatcacaac cgtggtcagc agtgaggatc aggatgtcgt catcgcgcag
    31501 caaagacatc agctccggca gacggcggtc gaacagctcc agacccgcag cataaccggc
    31561 gacgtcgcga cggtggcccc aggaagagtc gaagtcaacg aagttggtga agacgatggt
    31621 gttatcaccc gcttctttca tctctttgat ggtggcgtca aacagcgcgt ccaggccagt
    31681 tgctttcact ttcttggtga taccgcagtt ggcgtagatg tctgcaattt taccgacaga
    31741 aaccacctga ccgtgttttt catcaaccag tttctgcagc acggtcggtg ctggcggctc
    31801 aacagccagg tcgtgacggt taccggtacg ctggaagtta ccggctttgt caccgataaa
    31861 cggacgagcg ataacacgac cgatgttgta gccgccgttg gtcagctctt cacgggcgat
    31921 ttcgcacagt tcgtagagtt tatccaggcc aaaggtttct tcgtggcagg caatctggaa
    31981 cacggagtca gcggaggtat agaaaatcgg cttgccggtt ttcatgtgct cttcgcccag
    32041 ctgatccaga atgaccgtac cggaagagtg gcagttaccg aggtaacccg gcagattagc
    32101 gcgttcgacc agtttatcca gcagctcttg cgggaagctg ttttcgtgat cggagaagta
    32161 tccccactca aacagaaccg ggacaccggc gatttcccag tgaccagacg gggtatcttt
    32221 accggatgac atttcgtgcg cccatgcgta cgcgccgata acttcagcgt tgccgtccat
    32281 tcccgccgga atgaaaccgg tagaaccttc gtgtgctttc gccagcccca gacgggtcag
    32341 atttggcaga ttgagcgggc ctttacgacc gttatcagct tcgcctttgg cacaagcttc
    32401 tgcgatatga cccagggtgt cagccccgac gtcaccaaag cgttctgcat cttctgtagc
    32461 gccgatgccg aatgagtcca gcaccataat aaatgcacgt ttcatatgtt ctccgtactc
    32521 agtgcttcaa atttaaatga tcagatcagt ataccgttat tcgctgatac ggcgatagac
    32581 agttggtgtg ctttccggtg ctttatcggc aagtttaatt gccgctttca ccgctttcgc
    32641 cgcttcctgc cagctgtttt cgtctttcgc gtggataacc gccagcggac gctgaccgtc
    32701 tacttggtcg cccagacgcg ccatatcagt aaagccgacg ctgtaatcga tggtgtcaga
    32761 tgcctgacga cgaccgccgc ccattgcaac cactgccatc cccagcgcgc gggtatccat
    32821 ttcactgaca aaaccttcgg tatcagcata gactgctttc gtcagcatcg ctgtcggcag
    32881 atacttcgcg tagttctcaa cgaagtcggt cgggcctttt tgtgccgcta ccatacgacc
    32941 aaagacttct gccgctttac cgttgtccag caccgcctgc aatttcgcgc gcgcttcggc
    33001 gtcatctttc gccagtttgc cggagatcag catctccacg cacagcgcca tcgtgacatc
    33061 aaacagacgc gggttacgat attcacccgt caggaactgc accgcttcac gaacttcaac
    33121 cgcgttacct gcactggagg ccagtacctg attcatgtcg gtgagcagcg cggtggtgcg
    33181 cacgccagcg ccgttagcca cgccaacaat cgcttcggca agggcttcag agagttcgta
    33241 ggtcggcata aacgcgccgc tacccacttt cacgtccatc accagcgcat ccagaccttc
    33301 cgccagtttc ttcgccagga tcgaggcagt gatcagcggg atggagtcca cggttgcggt
    33361 aatatcacgg gtcgcgtaga aacgtttatc cgccggagcc agtgagctgg tctgaccgat
    33421 aatcgccacg ccgacgtctt taataatttc gcggaaacgg ttgtcatccg ggaaaatgtc
    33481 gaagccaggg atggattcca gtttgtcgag cgtaccgcca gtatgaccga ggccgcgacc
    33541 ggagatcatc ggaatatagc cgccgcaggc tgcgaccatc ggccccaaca tcagcgaagt
    33601 gacatcgccg acgccgccgg tggaatgttt atcaacaatc gggccattca gatgcaggct
    33661 tttccagtcg agaacggttc ctgaatctcg catcgccatg gtcagcgaga cacgctcagg
    33721 cattgtcata tcgtggaaga aaatggtcat cgcgagggcg gcaatctgcc cttcggagat
    33781 agtgttgtcg cgaatgccgt tgataaagaa acgaatttct tcatcgctca gtgcatgacc
    33841 atcacgtttt ttacgaataa tttcttgtgc gagaaacaag gtaacctccc gaggaaaaga
    33901 gtatgaggcg gcttttgccg gatgcgtcta cgccttatcc ggcctacggg tagatacgtc
    33961 tcgtaggcct gataagcgca gcgcatcagg cgtaaagcat cttgcttagt agctgctggc
    34021 gctcttaccg tcaccgtggc ccagcgcttt caacaggctt gccagcaggc tggaagcacc
    34081 aaagcggtag tgacgcgcat ctgcccagtc agcaccgaac agttcatctg cgatggcgag
    34141 atatttctgc gcatcttccg cagtacgcac gccgcccgcc ggtttgaaac caacggtttt
    34201 ttctacgccc atatcacgga tcacttccat catgatgcgc gcgctttccg gcgtcgcgtt
    34261 cactgccact ttaccggtag aggttttgat gaagtcagca cccgctttga tggagatttc
    34321 agacgcttta cggatcagcg cttcgtcttt cagttcgccg gtttcgatga tcactttcag
    34381 cagtacattc gctgccgcgc aagcctcttt acaggctttc accaggtcaa aaccaacctg
    34441 ctcgttaccc gccatcagcg cgcggtacgg gaacacaacg tcaacttcat cagcaccgta
    34501 ggcgattgcc gcacgggttt ctgccagcgc gatttcgatg tcatcgttac cgtgtgggaa
    34561 gttggttacc gtagcgattc ggatttccgg ggtgccctgc tctttcagcg ttttgcgagc
    34621 aatcgggata aagcgaggat agatacagat agcggcggta ttgccgaccg gagttttggt
    34681 ctgatgacac agagcaatta ctttctcgtc ggtgtcgtcg tcattcaggg tggtcaggtc
    34741 catcaatttc agtgcacgca ggctgcttgc tttcagatca gtcatttcat tctcctggct
    34801 tgtcgccaat aaaattcacc ttgcgagttt gttagtattc taacatctac tccgcaacac
    34861 acttcgatat acatcacaat taaggaaatc tacttacaag tttgcatcac agtaatgcga
    34921 tctggttcaa ataattcact ttcaaatgaa tgcgtcagtg gtggcaaacg catcaggatc
    34981 aaagtgaaca tcacgaaact tcttacaatg gcgcatcacc ttcggcataa aaggaaaaga
    35041 agatgcccac ttctcatgaa aatgcactgc aacaacgttg ccagcaaatt gtcaccagcc
    35101 cagtgcttag cccggagcag aagcgccatt ttctggctct ggaagcagaa aacaatctgc
    35161 cttatccgca gcttcctgcc gaagcccgcc gcgcgctgga tgagggtgta atctgcgata
    35221 tgtttgaagg tcatgcgccg tacaaaccgc gctatgtctt acccgattac gcccgttttc
    35281 tggcgaacg
//
LOCUS       DADMHC010000018        35107 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.018, whole genome shotgun sequence.
ACCESSION   DADMHC010000018 DADMHC010000000
VERSION     DADMHC010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 35107)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35107)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35107
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.018"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..290)
                     /locus_tag="JNZ57_000716"
     CDS             complement(<1..290)
                     /locus_tag="JNZ57_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000735989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827036.1"
                     /translation="MKKLPPAPFFRLNRAAELLEIDIDDLLIMAAAESIYLSAYLCGY
                     DGTLHSIASLYRNCSLFPDVKEDCLLLADIITEVEDEKSFKAGVVNHIDCHVL"
     gene            complement(386..1645)
                     /locus_tag="JNZ57_000717"
     CDS             complement(386..1645)
                     /locus_tag="JNZ57_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014639344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY8827037.1"
                     /translation="MPKLTDMQIRAWIKSGERFEGRADGNGLYLRYREADKTPTWRFR
                     YKLAGKSRAMLIGSYSELSLSKARETAKELSARVALGYDVAGEKQKHKTEALAKMEAE
                     KNAMRVSELAAEYFERQILPRWKHPDILRRRIDKDINPCIGSMKVEDVKPRHIDDMLK
                     GIVDRGAPTIATDVLRWTRRIFDYGIKRHALEINPCSAFEVADAGGKEAARDRWLTRD
                     ELIQLFKAMRTAKGFSRQNEITFKLLLALCVRKMELCAARWEEFDLDGAVWHLPEERS
                     KNGDPIDIPLPSPAVEWLRELHTFSCNSAWVLPARKMQNRMIPHIQESTLPVALAKVR
                     AKMPDVPNFTIHDFRRTARTHLAALGVDPVVAERCLNHRIKGVEGIYNRHQYFDERKA
                     ALAQWADLLVALESGKDYNVTPLRRAN"
     gene            complement(1836..2699)
                     /locus_tag="JNZ57_000718"
     CDS             complement(1836..2699)
                     /locus_tag="JNZ57_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HAY8827038.1"
                     /translation="MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRS
                     LEPVVRERIRSRLTRGKVECTLRYEPDISAQGELILNEKLAKQLVTAANWVKMQSDEG
                     EINPVDILRWPGVMAAQEQDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRL
                     EGVTAEVVKVRAHMPEILQWQRERLVAKLEDAQVQLENNRLEQELVLLAQRIDVAEEL
                     DRLEAHVKETYNILKKKEAVGRRLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLI
                     EQMREQIQNIE"
     gene            2826..3542
                     /gene="rph"
                     /locus_tag="JNZ57_000719"
     CDS             2826..3542
                     /gene="rph"
                     /locus_tag="JNZ57_000719"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006803115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HAY8827039.1"
                     /translation="MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIE
                     EGVPRFLKGQGQGWITAEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAV
                     DLKALGEFTITLDCDVLQADGGTRTASITGACVALADALQKLVENGKLKTNPMKGMVA
                     AVSVGIVNGEAVCDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLTLL
                     ALARGGIESIVATQKAALAN"
     gene            3608..4249
                     /gene="pyrE"
                     /locus_tag="JNZ57_000720"
     CDS             3608..4249
                     /gene="pyrE"
                     /locus_tag="JNZ57_000720"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HAY8827040.1"
                     /translation="MKPYQRQFIEFALGKQVLKFGEFTLKSGRKSPYFFNAGLFNTGR
                     DLALLGRFYAEALVDSGLEFDLLFGPAYKGIPIATTTAVALAEHHDLDLPYCFNRKEA
                     KDHGEGGNLVGSALQGRVMLVDDVITAGTAIRESMEIIQANGATLAGVLISLDRQERG
                     RGEISAIQEVERDYNCKVISIITLKDLIAYLEEKPEMAEHLAAVKAYREEFGV"
     gene            complement(4286..4882)
                     /gene="slmA"
                     /locus_tag="JNZ57_000721"
     CDS             complement(4286..4882)
                     /gene="slmA"
                     /locus_tag="JNZ57_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000818604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid occlusion factor SlmA"
                     /protein_id="HAY8827041.1"
                     /translation="MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVS
                     EAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTTARLRLIVLLLLGFGERN
                     PGLTRILTGHALMFEQDRLQGRINQLFERIEAQLRQVLREKRMREGEGYTTDETLLAS
                     QILAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ"
     gene            complement(4989..5447)
                     /gene="dut"
                     /locus_tag="JNZ57_000722"
     CDS             complement(4989..5447)
                     /gene="dut"
                     /locus_tag="JNZ57_000722"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000976070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HAY8827042.1"
                     /translation="MMKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLDDAVELA
                     PGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISVW
                     NRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDFDATDRGEGGFGHSGRQ"
     gene            complement(5425..6645)
                     /gene="coaBC"
                     /locus_tag="JNZ57_000723"
     CDS             complement(5425..6645)
                     /gene="coaBC"
                     /locus_tag="JNZ57_000723"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418096.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HAY8827043.1"
                     /translation="MSLAGKKIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAK
                     AFITPLSLQAVSGYPVSDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGM
                     ANDLVSTICLATPAPVAVLPTMNQQMYRAAATQHNLEGLASRGLLIWGPDSGSQACGD
                     IGPGRMLDPLTIVDMAVAHFSPVNDLKHLNIMITAGPTREPLDPVRYISNHSSGKMGF
                     AIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAA
                     VADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNV
                     EEYARQKRICKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKELLGQLL
                     LDEIVTRYDEKNRR"
     gene            6817..7486
                     /locus_tag="JNZ57_000724"
                     /pseudo
     CDS             6817..7486
                     /locus_tag="JNZ57_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418095.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RadC family protein"
     gene            7703..7939
                     /gene="rpmB"
                     /locus_tag="JNZ57_000725"
     CDS             7703..7939
                     /gene="rpmB"
                     /locus_tag="JNZ57_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008457442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HAY8827044.1"
                     /translation="MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEK
                     RFVTLRVSAKGMRVIDKKGIDTVLAELRARGEKY"
     gene            7960..8127
                     /gene="rpmG"
                     /locus_tag="JNZ57_000726"
     CDS             7960..8127
                     /gene="rpmG"
                     /locus_tag="JNZ57_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010847629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HAY8827045.1"
                     /translation="MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVR
                     QHVIYKEAKIK"
     gene            8225..9034
                     /gene="mutM"
                     /locus_tag="JNZ57_000727"
     CDS             8225..9034
                     /gene="mutM"
                     /locus_tag="JNZ57_000727"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HAY8827046.1"
                     /translation="MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRL
                     SDQPVLSVQRRAKYLLLELPEGWIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNGKV
                     LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMD
                     NKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLK
                     DFLQSDGKPGYFAQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRQCQK"
     gene            complement(9073..9552)
                     /gene="coaD"
                     /locus_tag="JNZ57_000728"
     CDS             complement(9073..9552)
                     /gene="coaD"
                     /locus_tag="JNZ57_000728"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HAY8827047.1"
                     /translation="MQKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKP
                     MFTLEERVALAQQATAHLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQL
                     AHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA"
     gene            complement(9560..10837)
                     /gene="waaA"
                     /locus_tag="JNZ57_000729"
     CDS             complement(9560..10837)
                     /gene="waaA"
                     /locus_tag="JNZ57_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HAY8827048.1"
                     /translation="MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRH
                     PLKPGGIMLHSVSVGETLAVIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQ
                     HVYLPYDLPDALNRFLNKVDPKLVLIMETELWPNLIAALHKRKIPLVIANARLSARSA
                     AGYAKLGKFVRRLLRRITLIAAQNEEDGARFVALGAKNNQVTVTGSLKFDISVTPQLA
                     AKAVTLRRQWAPHRPVWIATSTHEGEESVVIAAHQVLLQQFPNLLLILVPRHPERFPD
                     AINLVRQAGLSYITRSSGEVPSTSTQVVVGDTMGELMLLYGIADLAFVGGSLVERGGH
                     NPLEAAAHAIPVLMGPHTFNFKDICARLEQASGLITVTDATTLAKEVSSLLTDADYRS
                     FYGRHAVEVLYQNQGALQRLLQLLEPYLPPKTH"
     gene            11250..12308
                     /gene="rfaQ"
                     /locus_tag="JNZ57_000730"
     CDS             11250..12308
                     /gene="rfaQ"
                     /locus_tag="JNZ57_000730"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptosyltransferase
                     RfaQ"
                     /protein_id="HAY8827049.1"
                     /translation="MDKLFRRILLIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQ
                     DTIPILSENPEINALYGIKNKKAKASEKIANFFHLIKVLRANKYDLIVNLTDQWMVAI
                     LVRLLNARVKISQDYHHRQSAFWRKSFTHLVPLQGGNVVESNLSVLTPLGVDSLVKQT
                     TMSYPPASWKRMRRELDHAGVGQNYVVIQPTARQIFKCWDNAKFSAVIDALHVRGYEV
                     VLTSGPDKDDLACVNEIAQGCQTPPVTALAGKVTFPELGALIDHAQLFIGVDSAPAHI
                     AAAVNTPLISLFGATDHIFWRPWSNNMIQFWAGDYREMPTRDQRDRNEMYLSVIPAAD
                     VIAAVDKLLPSSTTGTSL"
     gene            12305..13429
                     /locus_tag="JNZ57_000731"
     CDS             12305..13429
                     /locus_tag="JNZ57_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HAY8827050.1"
                     /translation="MIVAFCLYKYFPFGGLQRDFMRIAQTVAARGHHVRVYTQSWEGE
                     YPDVFELIKVPVKSHTNHGRNAEYFAWVQKHLREHPVDKVVGFNKMPGLDVYYAADVC
                     YAEKVAQEKGFFYHLTSRYRHYAAFERATFEQGKPTQLLMLTDKQIADFQKHYQTEAE
                     RFHILPPGIYPDRKYSQQPANSREIFRKKNGITEQQYLLLQVGSDFTRKGVDRSIEAL
                     ASLPDSLRHNTLLYVVGQDKPRKFEALAEKRGVRSNVHFFSGRNDVSELMAAADLLLH
                     PAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIVDANCGEAIAEPFRQETLNEILRKA
                     LTQSSLRQAWAENARHYADTQDLYSLPEKAADIITGGLDG"
     gene            13422..14219
                     /gene="rfaP"
                     /locus_tag="JNZ57_000732"
     CDS             13422..14219
                     /gene="rfaP"
                     /locus_tag="JNZ57_000732"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312532.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptose(I) kinase RfaP"
                     /protein_id="HAY8827051.1"
                     /translation="MVELKEPFATLWRGKDPFEEVKTLQGEVFRELETRRTLRFEMAG
                     KSYFLKWHRGTTLKEIIKNLLSLRMPVLGADREWSAIHRLRDVGVDTMYGVAFGEKGI
                     NPLSRTSFIITEDLTPTISLEDYCADWATNPPDVRVKRMLIKRVATMVRDMHAAGINH
                     RDCYICHFLLHLPFSGKEEELKISVIDLHRAQLRTRVPRRWRDKDLIGLYFSSMNIGL
                     TQRDIWRFMKVYFAAPLKDILKQEQGLLSQAEAKATKIRERTIRKSL"
     gene            14235..15251
                     /gene="waaO"
                     /locus_tag="JNZ57_000733"
                     /gene_synonym="rfaI"
     CDS             14235..15251
                     /gene="waaO"
                     /locus_tag="JNZ57_000733"
                     /gene_synonym="rfaI"
                     /EC_number="2.4.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001540083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     3-alpha-galactosyltransferase"
                     /protein_id="HAY8827052.1"
                     /translation="MSAHYFNPQEMINKTIIFDERPAASVASSFHVAYGIDKNFLFGC
                     GVSITSVLLHNNDVSFVFHVFIDDIPEADIQRLAQLAKSYRTCIQIHLVNCERLKALP
                     TTKNWSIAMYFRFVIADYFIDQQDKILYLDADIACQGNLKPLITMDLANNVAAVVTER
                     DANWWSLRGQSLQCNELEKGYFNSGVLLINTLAWAQESVSAKAMSMLADKAIVSRFTY
                     MDQDILNLILLGKVKFIDAKYNTQFSLNYELKKSFVCPINDETVLIHYVGPTKPWHYW
                     AGYPSAQPFIKAKEASPWKNEPLMRPVNSNYARYCAKHNFKQNKPINGIMNYIYYFYL
                     KIIK"
     gene            15268..16263
                     /locus_tag="JNZ57_000734"
     CDS             15268..16263
                     /locus_tag="JNZ57_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001001722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide 1,2-glucosyltransferase"
                     /protein_id="HAY8827053.1"
                     /translation="MNEFIKERFSYLADNKKENAPELNVSYGIDKNFLYGAGVSISSV
                     LINNSDINFVFHVFTDYVDDDYLKSFNETAKQFNTSIIVYLIDPKYFADLPTSQFWSY
                     ATYFRVLSFEYLSESISTLLYLDADVVCKGSLKPLTEIIFKDEFAAVIPDNDSTQAAC
                     AKRLNIPEMNGRYFNAGVIYVNLKKWHEANLTPYLLKLLRGETKYGSLKYLDQDALNI
                     AFNMNNIYLAKDFDTIYTLKNELYDRSHRKYQQTITDKTVLIHYTGITKPWHSWAGYP
                     SASYFNIAREQSPWKKYPLKEARTVAEMQKQYKHLFAHGEYIKGITSLIKYKLKK"
     gene            16273..16965
                     /gene="rfaY"
                     /locus_tag="JNZ57_000735"
     CDS             16273..16965
                     /gene="rfaY"
                     /locus_tag="JNZ57_000735"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000633080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptose(II) kinase RfaY"
                     /protein_id="HAY8827054.1"
                     /translation="MITSIRYRGFSFYYKDNDNKYKEIFDEILAYNFKTVNVLCNIDD
                     TKVSLIDTKYGRYVFKVFAPKTKRNERFLKSFVKGDYYQNLIVETDRVISAGLTFPND
                     FYFLAGRKIFNYASVFIMLIEYVEGVELNDMPIIPENVKAEIKASMEKLHALNMLSGD
                     PHRGNFIVSKDGVRIIDLSGKSCTAERKARDRLAMERHLGIANEIKDYGYYSVIYRTK
                     LRKFIKKLKGKA"
     gene            16991..18016
                     /locus_tag="JNZ57_000736"
     CDS             16991..18016
                     /locus_tag="JNZ57_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000364797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactose--(galactosyl) LPS
                     alpha1,2-galactosyltransferase"
                     /protein_id="HAY8827055.1"
                     /translation="MDLLAESITEVAVSGEIANTDRVLNIAYGIDRNFLFGAAVSMQS
                     VVMHNPDLAVKFHLFTDYIDEDYLQRVNAFTSKNANVEVIIYKVSNAFIDIFPSLKQW
                     SYATFFRLVAFQYLSETIENLLYIDADVICKGSLAGLLDINFDEDKFAAVIKDVPFMQ
                     EKPAKRLAIEGLPGNYFNAGVVYLQLEAWAKNDFMNKAIAMLASDPQHTKYKCLDQDI
                     LNILFFGHCNFISGDYDCFYGIDYELKNKSDEDYKKTITDDTKLIHYVGVTKPWNDWT
                     NYPCQKYFNEAYQASCWNDVAFIPATNEKQYQVKYQHAKKNGDTFNAFIYFIKFKLNK
                     YKRKLFG"
     gene            18101..19084
                     /locus_tag="JNZ57_000737"
     CDS             18101..19084
                     /locus_tag="JNZ57_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016246416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HAY8827056.1"
                     /translation="MSNDYPLVSIIIPTYNSSDYITETLTKLEKQTYPNFEIVIVNDG
                     SKDNTSNVLREYGLTHSRLIIINKENGGVSSARNTGIRKAQGQFICFMDDDDEIDPNY
                     LLKMYTRQHETGGDAIYCGLYGHYIKDGVTYSPINTEFNEGSLLFDFFYKKVRFHIGC
                     LFIRKQLLEENNLFFDEDLRLGEDLDFIYRLLITCDMYAVPYYMYKHNYRENSLMNSC
                     RTITHYRHESFAHERIYSSVMQLYKGNRKEEIHTLLSQNRAYHKTRYLWNVLLNGDFK
                     LLNQLVESNEKELRDCNLPGKRDKRRAKILASKNYILWRMVRLVNRKKNKR"
     gene            19130..20383
                     /locus_tag="JNZ57_000738"
     CDS             19130..20383
                     /locus_tag="JNZ57_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012602581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HAY8827057.1"
                     /translation="MSFCWNEINSGIKSLILILCIFSLMTLSLWDDVATKFLHAAGII
                     SALYFLATPKKTITNNPTLLIFISLCLLGIVNIIWYSHYKVSGSVYTNAYRGPMETGK
                     IALCSAFIFLVLFAKNEMRTKIKFGKLILFASLATQLLFFAHAMWQHFYLNVDRVALS
                     ASHATTAGYIILFPSLLASILILKSDFRHKTTLYTINFMLSLCAVIVTETRAAILVFP
                     FFALILIVMDSYINKRINYKLYCFIAIALLAGVFSFKDTLLMRMNDLNNDLVNYSHDN
                     TRTSVGARLAMYEVGLKTYSPIGQSLEKRAEKIHELEEKEPRLSGALPFVDSHLHNDL
                     IDTLSTRGIPGVVLTILAFSAILIYALRTAKEPYILILLFSLLVVGLSDVILFSKPVP
                     TAVFVTIILLCAYFKAQSDQYLLDK"
     gene            complement(20453..21433)
                     /gene="rfaC"
                     /locus_tag="JNZ57_000739"
     CDS             complement(20453..21433)
                     /gene="rfaC"
                     /locus_tag="JNZ57_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase RfaC"
                     /protein_id="HAY8827058.1"
                     /translation="MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQI
                     PSWHAAVERVIPVAIRRWRKAWFSAPIKAERKAFREALQAENYDAVIDAQGLVKSAAL
                     VTRLAHGVKHGLDWQTAREPLASLFYNCKHHIAKQQHAVERTRELFAKSLGYSKPQTQ
                     GDYAIAQHFLTNLPTDAGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWG
                     APHEEERAKRLAEGFDYVEVLPKMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNI
                     TVYGPTDPGLIGGYGKNQMVCRAPGNELSQLTANAVKRFIEENAENAAMI"
     gene            complement(21437..22483)
                     /gene="rfaF"
                     /locus_tag="JNZ57_000740"
     CDS             complement(21437..22483)
                     /gene="rfaF"
                     /locus_tag="JNZ57_000740"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose--LPS heptosyltransferase RfaF"
                     /protein_id="HAY8827059.1"
                     /translation="MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPL
                     LSRMPEVNEAIPMPLGHGALEIGERRKLGHSLREKRYDRAYVLPNSFKSALVPFFAGI
                     PHRTGWRGEMRYGLLNDVRVLDKEAWPLMVERYVALAYDKGIMRTAQDLPQPLLWPQL
                     QVSEGEKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVL
                     FGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVA
                     AALNRPLVALYGPSSPDFTPPLSHKARVIRLITGYHKVRKGDAAEGYHQSLIDITPQR
                     VLEELNTLLLQEEA"
     gene            complement(22493..23425)
                     /gene="rfaD"
                     /locus_tag="JNZ57_000741"
     CDS             complement(22493..23425)
                     /gene="rfaD"
                     /locus_tag="JNZ57_000741"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HAY8827060.1"
                     /translation="MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD
                     LDIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLH
                     YCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANS
                     QIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA
                     DVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFT
                     QADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA"
     gene            23639..24835
                     /gene="kbl"
                     /locus_tag="JNZ57_000742"
     CDS             23639..24835
                     /gene="kbl"
                     /locus_tag="JNZ57_000742"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HAY8827061.1"
                     /translation="MRGEFYQQLTNDLETARAEGLFKEERIITSAQQADITVADGSHV
                     INFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGM
                     EDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQE
                     LEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFV
                     GENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNS
                     LAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAGFTLAGADHAIIPVILGD
                     AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGK
                     QLGVIA"
     gene            24845..25870
                     /gene="tdh"
                     /locus_tag="JNZ57_000743"
     CDS             24845..25870
                     /gene="tdh"
                     /locus_tag="JNZ57_000743"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HAY8827062.1"
                     /translation="MKALSKLKAEEGIWMTDVPVPELGHNDLLIKIRKTAICGTDVHI
                     YNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGG
                     RTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSF
                     DLVGEDVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKE
                     NLNDVMAELGMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKV
                     IFKGLFIKGIYGREMFETWYKMAALIQSGLDLSPIITHRFSIDDFQKGFDAMRSGQSG
                     KVILSWD"
     gene            26109..27143
                     /gene="waaH"
                     /locus_tag="JNZ57_000744"
     CDS             26109..27143
                     /gene="waaH"
                     /locus_tag="JNZ57_000744"
                     /EC_number="2.4.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronate:LPS(HepIII) glycosyltransferase"
                     /protein_id="HAY8827063.1"
                     /translation="MMNSTNKLSVIIPLYNAGDDFRTCMESLITQTWTALEIIIINDG
                     STDNSVEIAKHYAENYPHVRLLHQANAGASVARNRGIEVATGKYVAFVDADDEVYPTM
                     YETLMTMALEDDLDVAQCNADWSFRETGETWQSIPSDRLRSTGVLTGPDWLRMGLSSR
                     RWTHVVWMGVYRRDVIVKNNIKFIAGLHHQDIVWTTEFMFNALRARYTEQSLYKYYLH
                     NTSVSRLHRQGNKNLNYQRHYIKITRLLEKLNRNYADKITIYPEFHQQITYEALRVCH
                     AVRKEPDILTRQRMIAEIFTSGMYKRLITNVRSVKVGYQALLWSFRLWQWRDKTRSHH
                     RITRSAFNLR"
     gene            complement(27130..28089)
                     /locus_tag="JNZ57_000745"
     CDS             complement(27130..28089)
                     /locus_tag="JNZ57_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312519.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HAY8827064.1"
                     /translation="MFPFRRNVLAFAALLALSSPVLAGKLAIVIDDFGYRPHNENQVL
                     AMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDE
                     IERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQA
                     MRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPLTVRVL
                     QQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPV
                     YANRFFEVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN"
     gene            complement(28093..29376)
                     /gene="envC"
                     /locus_tag="JNZ57_000746"
     CDS             complement(28093..29376)
                     /gene="envC"
                     /locus_tag="JNZ57_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein hydrolase activator EnvC"
                     /protein_id="HAY8827065.1"
                     /translation="MRGKAINTMTRAVKPRRFAIRPIIYASVLSAGVLLCAFSAHADE
                     RDQLKSIQADIAAKERAVRQKQQQRASLLAQLKKQEEAISEATRKLRETQNTLNQLNK
                     QIDEMNASIAKLEQQKAAQERSLAAQLDAAFRQGEHTGIQLILSGEESQCGQRLQAYF
                     GYLNQARQETIAQLKQTREEVAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNERKK
                     TLAGLESSIQQGQQQLSELRANESRLRNSIARAEAAAKARAEREAREAQAVRDRQKEA
                     TRKGTTYKPTESEKSLMSRTGGLGAPRGQAFWPVRGPTLHRYGEQLQGELRWKGMVIG
                     ASEGTEVKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGSQVRAGQ
                     PIALVGSSGGQGRPSLYFEIRRQGQAVNPQPWLGR"
     gene            complement(29386..30930)
                     /gene="gpmM"
                     /locus_tag="JNZ57_000747"
                     /gene_synonym="pgmI"
     CDS             complement(29386..30930)
                     /gene="gpmM"
                     /locus_tag="JNZ57_000747"
                     /gene_synonym="pgmI"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HAY8827066.1"
                     /translation="MSVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPH
                     TLIDASGLEVGLPDRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGA
                     VDKAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPR
                     SAESSLKKFEEKFAALGKGRVASIIGRYYAMDRDNRWDRVEKAYDLLTLAQGEFQADT
                     AVAGLQAAYARDENDEFVKATVIRAEGQPDAAMEDGDALIFMNFRADRAREITRAFVN
                     ADFDGFARKKVVNVDFVMLTEYAADIKTAVAYPPASLVNTFGEWMAKNDKTQLRISET
                     EKYAHVTFFFNGGVEESFKGEDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKY
                     DTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQ
                     MRDPATGQAHTAHTNLPVPLIYVGDKNVKAVAGGKLSDIAPTMLSLMGMEIPQEMTGK
                     PLFIVE"
     gene            31175..31606
                     /locus_tag="JNZ57_000748"
     CDS             31175..31606
                     /locus_tag="JNZ57_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HAY8827067.1"
                     /translation="MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGE
                     ATRLINKEDAVVVDLRQRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKPVIVVDG
                     SGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENLPLVRGK"
     gene            31748..31999
                     /gene="grxC"
                     /locus_tag="JNZ57_000749"
     CDS             31748..31999
                     /gene="grxC"
                     /locus_tag="JNZ57_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HAY8827068.1"
                     /translation="MANVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEM
                     IKRSGRTTVPQIFIDAQHIGGCDDLYALDARGGLDPLLK"
     gene            32062..32529
                     /gene="secB"
                     /locus_tag="JNZ57_000750"
     CDS             32062..32529
                     /gene="secB"
                     /locus_tag="JNZ57_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HAY8827069.1"
                     /translation="MSEQNNTEMTFQIQRIYTKDISFEAPNAPHVFQKDWQPEVKLDL
                     DTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQMAHCLGAYC
                     PNILFPYARECITSMVSRGTFPQLNLAPVNFDALFMNYLQQQAGEGTEEHQDA"
     gene            32529..33548
                     /gene="gpsA"
                     /locus_tag="JNZ57_000751"
     CDS             32529..33548
                     /gene="gpsA"
                     /locus_tag="JNZ57_000751"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HAY8827070.1"
                     /translation="MNQRNASMTVIGAGSYGTALAITLARNGHEVVLWGHDPEHIATL
                     ERDRCNAAFLPDVPFPDTLHLESDLATALAASRNILVVVPSHVFGEVLRQIKPLMRPD
                     ARLVWATKGLEAETGRLLQDVAREALGDQIPLAVISGPTFAKELAAGLPTAISLASTD
                     QTFADDLQQLLHCGKSFRVYSNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTAL
                     ITRGLAEMSRLGAALGAEPATFMGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVQSA
                     QEKIGQVVEGYRNTKEVRELAHRFGVEMPITEEIYQVLYCGKNAREAALTLLGRARKD
                     ERSSH"
     gene            33628..34449
                     /gene="cysE"
                     /locus_tag="JNZ57_000752"
     CDS             33628..34449
                     /gene="cysE"
                     /locus_tag="JNZ57_000752"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HAY8827071.1"
                     /translation="MSCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSA
                     LSYMLANKLSSPIMPAIAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPL
                     LYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHAT
                     GIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGA
                     KIGAGSVVLQPVPPHTTAAGVPARIVGKPDSDKPSMDMDQHFNGINHTFEYGDGI"
     gene            complement(34502..34975)
                     /gene="trmL"
                     /locus_tag="JNZ57_000753"
     CDS             complement(34502..34975)
                     /gene="trmL"
                     /locus_tag="JNZ57_000753"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HAY8827072.1"
                     /translation="MLNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRL
                     RRAGLDYHEFTAVTRHHDYRAFLEAENPQRLFALTTKGTPAHSAVSYQDGDYLMFGPE
                     TRGLPASILDALPAEQKIRIPMVPDSRSMNLSNAVSVVVYEAWRQLGYPGALLRD"
BASE COUNT         8792 a         8321 c         8747 g         9247 t
ORIGIN      
        1 agcacatggc aatctatatg atttacaacg cctgccttaa agcttttttc gtcctctact
       61 tcagtgatta tgtcggcaag taataagcag tcttctttga cgtctgggaa taaagagcaa
      121 ttgcggtaaa gactcgcgat gctatgtaat gtgccgtcgt agccgcaaag gtacgcgctc
      181 aaatatatag attctgccgc cgccataatc aaaagatcat caatatctat ttctaataat
      241 tcggctgctc tgttaagcct gaaaaaaggg gcgggtggta attttttcat tgcgtcacct
      301 tttacgctgc gccttatttt gtgattgagc caggcggtaa ggcttcccgc ttttcgcccc
      361 gtcgagctag gctcaatcta ttcagttagt tcgcccttct gagaggcgtt acgttgtagt
      421 cttttccgct ttccagtgcc actagcagat cagcccactg tgccagtgct gctttacgct
      481 catcaaaata ctgatggcgg ttataaatcc cctctacgcc cttaatgcga tgattgaggc
      541 atcgttccgc cacaacagga tcaacaccca acgctgctaa atgagtacgt gcggtgcgtc
      601 gaaagtcgtg aatcgtgaaa ttaggcacat ccggcatttt ggcgcgaacc ttagccagtg
      661 ctacgggtaa agtgctttcc tgaatatgtg ggatcattct gttttgcatc ttcctggccg
      721 gaagcaccca tgcgctatta catgaaaagg tgtgtagctc tctcaaccat tcaacggctg
      781 gggaaggtag aggtatatca atagggtctc cgtttttgct gcgttcttcc ggcaaatgcc
      841 ataccgcacc atctaaatca aactcttccc atcgtgcggc gcataattcc attttgcgga
      901 cgcataacgc taacagtaat ttgaacgtga tttcgttctg gcgactgaat cccttagccg
      961 tgcgcatggc tttgaatagc tggattaact catcgcgggt taaccagcgg tcacgggcag
     1021 cttctttccc tccggcgtct gccacctcaa aggctgaaca ggggttaatc tctagcgcgt
     1081 gccgtttgat tccgtagtcg aatatgcggc gcgtccatct cagcacgtcc gttgctatgg
     1141 tcggcgctcc acggtcaaca atacctttca gcatgtcatc gatatggcgc ggtttcacgt
     1201 cctctacctt catgctgcca atgcaggggt ttatatcttt gtcgatacgg cggcggagta
     1261 tatcggggtg cttccagcgc gggaggatct gacgctcaaa gtattcagcg gcaagctctg
     1321 aaacgcgcat agcgttcttc tctgcttcca tcttcgccag tgcttcggtt ttgtgcttct
     1381 gcttctctcc tgcaacgtca tagcccagcg caacgcgagc cgatagctct ttggctgtct
     1441 ctctggcctt tgatagtgat agctcgctat acgaaccaat tagcatggcg cgggacttcc
     1501 ctgcgagttt atagcggaat ctccatgtgg gggttttgtc ggcttcacgg taacgtaggt
     1561 ataaaccgtt accgtctgcc cgcccctcga atcgctctcc gctcttaatc catgcgcgga
     1621 tctgcatgtc tgttagtttt ggcattttgc gaatatccaa actttgaata gggggtgtac
     1681 ccaaagcaat gtacccaaac ctcattgggt acacctttgt gtacaccata atcatgcgct
     1741 ttgttgcgtc tttatgatag cccatgataa caaaaaagcc cgctgggttg cgggcttggt
     1801 gtgatttatg cgtcgtccta aatgttgctg atagcttact cgatattctg aatctgctcg
     1861 cgcatctgct caatcaacac tttcagctca atcgcggagt ttgtcacttc ggcattgata
     1921 gacttcgacg caagagtgtt cgactcgcgg ttgaattcct gcatcataaa gtccagacga
     1981 cgaccaacgg cttctttttt cttcagaatg ttgtaggtct ctttgacatg cgcttccagg
     2041 cggtccagtt cttcggcaac gtcaattcgt tgtgccagca gaaccagctc ctgctccaga
     2101 cggttgtttt ccaactgaac ctgagcatct tccagcttcg cgaccagacg ctcacgctgc
     2161 cattgcagga tttccggcat atgggcgcgg actttgacca cttcggcggt gacgccttcc
     2221 agacgctgct cgatcaatgc tttcagtgcc tgaccttcgg tttcgcgcgc gacaataaag
     2281 tcgtccagcg taccatccag cgccgcgaga atttcagcgg caatggcgtc aagatcctgc
     2341 tcctgggctg ccatcacgcc cggccagcgt agaatatcaa ccgggttgat ttccccttcg
     2401 tcactctgca tttttaccca gttcgcggca gttaccagct gtttagccag tttttcgttg
     2461 aggatcagct caccttgcgc gctaatatct ggctcatagc gcagggtaca ttccacttta
     2521 ccgcgcgtca ggcgagaacg aatacgctcg cgaacgacag gttcaaggct acggaactgc
     2581 tccggcagac gaaagtaagt ttccagataa cgctggttta ccgagcgcat ttcccaggtt
     2641 gcgctccccc attcaccctt gatttcacgc cgggcgtagg cggtcatact gcggatcata
     2701 gacgttcctg tttataaaag gagaggtgga aggattatag ccatcgatgc cttgtcagga
     2761 taggaataac cgccggaagt ccgtataatg cgcagccaca tttgtttcaa gccggagatt
     2821 tcaatatgcg tccagcaggc cgtagcaata atcaggtgcg tcccgttacc ctgactcgta
     2881 actatacaaa acatgcagaa ggctcggtgc tggtcgaatt tggcgatacc aaagtgttgt
     2941 gtaccgcctc tattgaagaa ggcgtgccgc gcttcctgaa aggtcagggc cagggctgga
     3001 tcaccgcaga gtacggcatg ctgccacgtt ctacccacac ccgtaacgct cgtgaagcgg
     3061 cgaaaggtaa gcagggtgga cgcacaatgg aaatccagcg tctgatcgcc cgtgctcttc
     3121 gcgcggcagt agatttgaaa gcgctgggtg agttcaccat tacgctggac tgcgacgtgc
     3181 ttcaggctga tggtggcacg cgtaccgcgt cgattacggg tgcctgcgtg gcgctggcag
     3241 atgcgctaca gaagctggtg gaaaacggca agctgaaaac caacccgatg aaagggatgg
     3301 tagccgcagt ttctgtcgga attgtgaacg gcgaagcggt ttgcgatctg gaatacgttg
     3361 aagactctgc cgcagagacc gacatgaacg tagtgatgac cgaagacggg cgcatcattg
     3421 aagtgcaggg gacggcagaa ggcgagccgt tcacccatga agagctactc accttgttgg
     3481 ctctggcccg agggggaatc gaatccattg tagcgacgca gaaggcggcg ctggcaaact
     3541 gatttttaag gcgactgatg agtcgccttt tttttgtctg tagaaaagta agatgaggag
     3601 cgaaggcatg aaaccatatc agcgccagtt tattgaattt gcgcttggca agcaggtgtt
     3661 aaagtttggc gagtttacgt tgaagtccgg gcgcaaaagc ccctatttct tcaacgccgg
     3721 gctgtttaat accgggcgcg atctggcact gttaggccgt ttttacgctg aagcgttggt
     3781 ggattccggc cttgagttcg atctgctgtt tggccctgct tacaaaggga tcccgattgc
     3841 caccactacc gccgtggcgc tggcggagca tcatgacctt gacctgccgt actgctttaa
     3901 ccgcaaagag gcaaaagacc acggtgaagg cggcaatctg gttggtagcg cgttacaagg
     3961 acgcgtaatg ctggtagatg atgtgatcac cgccggaacg gcgattcgcg aatcgatgga
     4021 gattattcag gctaatggcg cgacgcttgc tggcgtgttg atttcgcttg atcgtcagga
     4081 acgggggcgc ggcgagattt cggcgattca ggaagttgag cgtgattaca actgcaaagt
     4141 gatctctatc atcaccctga aagacctgat tgcttacctg gaagagaagc cggaaatggc
     4201 ggaacatctg gcggcggtta aggcctatcg cgaagagttt ggcgtttaaa gaaactcgcc
     4261 ggatgaaaag tcatccggcg tcatattact gcaactgtgc cgcaattagc ggccagcggg
     4321 cgtcaaaatc atccgtcggg cggtatttaa attcgctgcg gacaaaacgt gacagcatac
     4381 cttcacagaa ggccaggatc tggcttgcca gcagggtttc atcggtggtg taaccttcac
     4441 cctcacgcat tctcttttca cgcaatacct gacgcagctg cgcttcaata cgctcgaaca
     4501 gctggttgat gcgcccttgc aggcgatcct gttcaaacat tagcgcatga ccagtgagga
     4561 tgcgggtcag gccaggatta cgctcaccaa aaccgagaag cagcaacaca atcagacgca
     4621 ggcgcgctgt ggtgtctttc tcatctttca gaatcaggtt gatgcgagta atcaggctat
     4681 cttcgataaa ctcaatcagg ctatcgaaca tgcgggtctt actggggaag tggcgataca
     4741 gtgccgcttc ggaaacgccg acagaggcgg ccagttttgc cgtcgtgata cgttggcttc
     4801 catcgctgga ttccagcatc agcgccagag actgaagtat ttcctcgcga cggttccttt
     4861 tcgcagtttg tttttctgcc atgttacaaa atacccctga aaataagcac ttgccaggcg
     4921 gcacccacgc tatgaccgca aacgaaatgt ttgcggctat gttatgacgt tattcggatg
     4981 cgtatgtgtt actgacgacc agagtgacca aagccgcctt caccgcggtc ggtggcgtcg
     5041 aaatcttcca ccagattaaa ttcagcctgt actaccggaa caaaaatcat ctgggcgatg
     5101 cgttcgccag gttgaatggt gaagctgtcc tgaccacggt tccacacgga aatcatcaac
     5161 tggccctgat agtcggaatc gatcaatcct accaggttac caagcacgat accgtgctta
     5221 tgtcccaatc cggagcgcgg cagcatcatt gccgccagtg aaggatcggc aatatgaatc
     5281 gccagcccgg tcggaaccag cgtagtgtca cccggagcca gttctacggc gtcgtcgaga
     5341 caggcacgca ggtcaagtcc ggcagagcca gaggtggcat aagtcgggag cggaaattcc
     5401 ttcccaacgc gcgggtccag aatcttaacg tcgatttttt tcatcataac gggtcacgat
     5461 ctcgtcgagt aatagttggc caaggagctc tttgcgctca agcggtaaga ctttatctcc
     5521 gtcctgccag aaaaggtgta atgcgttgtt gtcgctgtta aatccttgag ttggctggga
     5581 aacatcgttc gcgcagatca gatcaaggtt tttacagata cgtttttgcc gggcgtattc
     5641 ttccacatta tttgtttcgg cggcaaatcc aacgacgtag ggtcgatggt cttttagtgc
     5701 ggcaacgcct gcgacgatat cggggttttt aaccattttt attgttaatt catcaccctg
     5761 cgtggcctgc tttttgattt tttctggggc cacggtagct gcgcgataat ccgccacggc
     5821 ggcgcagccg ataaaaatat tttgctgctg tacagaagca ttcacggcgg cttccatttc
     5881 cagcgcggtc atcacatcaa cacgtttaac aaacggtggc gtcggtagtg aaaccggacc
     5941 tgataccagc gtgacgttcg cgccacgacg ggcagcggcg gcggcgatag caaaacccat
     6001 cttgccggag ctgtgattag agatataacg cacgggatcg agcggttcac gcgtcggacc
     6061 ggcggtaatc ataatgttca gatgtttcag gtcgttgacg ggcgaaaaat gcgccaccgc
     6121 catatccaca atggttaacg gatcgagcat tcgcccagga ccgatatcac cacaagcctg
     6181 actgccactg tctggccccc agatgagcaa accacgggaa gcaagcccct ctaaattatg
     6241 ctgcgtggca gcggcacggt acatctgctg gttcatggtg gggagcacgg ctacaggcgc
     6301 aggtgtagcc agacaaatcg tcgataccag gtcattcgcc attccggcag caacacgggc
     6361 aatcaaatct gccgtggcag gggcgagaat cactaaatca gcccatttac ccagctcaat
     6421 atggcccata gcggcttcgg ctgccgggtc cagcaaactg tcggaaacgg gataaccaga
     6481 aaccgcctgc aagctaagtg gggtgataaa ggcttttgcc gcttcggtca tggctacgcg
     6541 gacgtcggcc ccgcgatcgc gcaaacgacg caccagttca ggggttttat aggcagcaat
     6601 accgccgcta acgccgagaa cgattttttt accggccagg ctcatgatga tttttcctgt
     6661 tgggtgacac cagaagttgg cgattttatc acaatacttt tgttgtcgtg ccttcacctg
     6721 agaatcactt tgcgaggcgc tttccaggat tgaaaactgg ccgtcgattt aacggaacgg
     6781 ctatgacagg atgcgagcac cacaaaggag gtgaaggtga aaaacaattc acagctgttg
     6841 atgccgcgcg aaaaaatgct gaagtttggt attagcgcct taacggatgt cgagctgctg
     6901 gcgctatttc tgcgtaccgg aacgcgcggt aaagatgtat taaccctggc aaaagagatg
     6961 ctggagaatt tcggctctct ttatggcttg ttaacctctg aatatgaaca atttagtggc
     7021 gttcatggaa ttggcgtggc gaaatttgcc cagttaaagg ggattgctga actggcgcgg
     7081 cgttactaca acgtgcggat gcgtgaagaa agccctttac tcagcccgga gatgacgcgg
     7141 gaatttttac aaagccagct tacgggtgag gagcgggaga tctttatggt gatctttctc
     7201 gactcacaac accgggttat aacgcatagc cgtctttttt tccggcacgc taaaccatgt
     7261 tgaagtccat cctcgggaaa ttatccgcga agcgataaaa ataaacgcct cggcgctgat
     7321 ccttgcacat aatcaccctt cgggttgtgc tgaacccagt aaagcggata aactcattac
     7381 tgaacggata ataaagagtt gtcagttcat ggatttacgc gtgctcgacc atatcgtgat
     7441 tgggcgtgga gagaatgttt cttttgccga acgcggctgg atttaacccg ctatgcgcga
     7501 tccttcggga tctttgtctg ttcgggactt gagcacatcg ctgagtcagc gtatactacg
     7561 ccacctttga gaatctcggg tttggcattt gggcctggca atcgagagtt cacatagaac
     7621 tgcgatgact gggctgtaaa gcctgacgag gcgccaatac cccatacgaa gctcgagcta
     7681 atttgatttt tggagaatag acatgtcccg agtctgccaa gttactggca agcgtccggt
     7741 gaccggtaac aaccgttccc acgcactgaa cgcgactaaa cgccgtttcc tgccgaacct
     7801 gcactctcac cgtttctggg ttgagagcga gaagcgtttt gtcaccctgc gcgtatctgc
     7861 taaaggtatg cgtgtaatcg ataaaaaagg catcgataca gttctggctg aactgcgtgc
     7921 ccgtggcgaa aagtactaag tacttagagg aaataaatca tggctaaagg tattcgtgag
     7981 aaaatcaagc tggtttcttc tgctggtact ggtcacttct ataccactac gaagaacaaa
     8041 cgtactaagc cggaaaaact ggaactgaaa aaattcgatc cagttgttcg ccagcacgtg
     8101 atctacaaag aagcgaaaat caaataattc tcgctttgat gtaacaaaaa acctcgctcc
     8161 ggcggggttt tttgttatct gcttgccccc atattgactg catctgttca ttcctggaga
     8221 tgctatgcct gaattacccg aagttgaaac cagccgccgc ggcatagaac cgcatctcgt
     8281 tggtgcaacc attcttcatg cagtggtgcg caacggacgc ttgcgctggc cggtttcaga
     8341 agagatctac cgtttaagcg accaaccagt gcttagcgtg cagcggcggg ctaaatatct
     8401 gctgctggag ctgcctgagg gctggattat cattcattta gggatgtctg gcagcctgcg
     8461 catccttcca gaagaacttc cccctgaaaa gcatgaccat gtggatttgg tgatgagcaa
     8521 cggcaaagtg ctgcgctaca ccgatccgcg ccgctttggt gcctggctgt ggaccaaaga
     8581 gctggaaggg cataatgtgc tggcccatct tggaccggag ccgcttagcg acgatttcaa
     8641 tggtgagtat ctgcatcaga agtgcgcgaa gaaaaaaacg gcgattaaac cgtggctgat
     8701 ggataacaag ctggtggtag gggtagggaa tatctatgcc agcgaatcac tgtttgcggc
     8761 ggggatccat ccggatcggc tggcgtcatc actgtcgctg gcagagtgtg aattgttagc
     8821 tcgggtgatt aaagcggtgt tgctgcgttc gattgagcag ggtggtacaa cgctgaaaga
     8881 ttttctgcaa agtgatggta aaccgggcta tttcgctcag gaattgcagg tttacgggcg
     8941 aaaaggtgag ccgtgtcggg tgtgcggtac gccgattgtg gcgactaaac atgcgcagcg
     9001 ggcaacgttt tattgtcggc agtgccagaa gtaattcatg cgcgccggat cgcataccat
     9061 ccggcataaa cgctacgcta acttcgccat cagcgcctga tggacattct ccggcaggaa
     9121 atgggtgaca tcgccctgat ggcgcgccac ctctttcacc aacgatgaag agataaacga
     9181 ccactctttc gacggcatca gaaacacact ttccagttcc ggcattaagt ggcgattcat
     9241 atgcgccagc tgcatttcat attcaaaatc cgccaccgca cgcaggccac gaatcagcac
     9301 cgtagcgtgt tgattacggg cgaagttcgc catcaaatca ctaaacccaa ctacttccac
     9361 gttccccaga tgcgcggttg cctgctgtgc cagcgccaca cgctcttcca gggtaaacat
     9421 cggtttttta ctggggctgg cggcaatcgc cagaataacg tgatcgaaca tttgcgtggc
     9481 gcgcgtcacg atatcgatat gaccattggt aatgggatcg aaagtacccg gataaatcgc
     9541 ccgtttttgc ataacaacct caatgcgttt tcggtggcag gtaaggttcc agcagttgaa
     9601 gcaggcgctg tagcgcgccc tggttttgat acagtacttc aacggcatga cggccataga
     9661 aactacggta atcggcgtcg gtgagtaaag aggaaacctc ttttgcaagc gtagtggcat
     9721 cggtaacggt aatcagcccg cttgcctgct ccagccgcgc gcaaatgtct ttaaaattaa
     9781 aagtatgcgg ccccatcaat accggaatag cgtgtgcggc agcttccagc ggattatgcc
     9841 caccacgttc aaccagtgaa ccgccaacaa aggcgagatc ggcaatgccg tacagtaaca
     9901 tcaactcgcc catcgtatcg ccaaccacaa cctgcgtgct ggtggagggg acttcccctg
     9961 aagagcgtgt gatatagctt agtccagcct ggcggacaag gttaatcgca tccgggaagc
    10021 gttctggatg acggggtacc aggatgagca ataaattcgg gaattgctgt aacaatacct
    10081 gatgtgcggc gatcaccaca ctctcttcac cttcgtgagt gctggtggca atccataccg
    10141 ggcggtgtgg tgcccactgg cggcgcagcg tcacggcttt agcagccaac tgcggcgtta
    10201 cagaaatatc gaatttcagg ctaccggtaa cggttacctg gttatttttt gcgcccagcg
    10261 ccacaaaacg tgcaccatct tcttcatttt gggcggcaat cagcgtaata cgacgcagca
    10321 agcgacggac gaatttaccc agtttggcat aacctgcggc cgagcgggca gagagtcgcg
    10381 cgttcgcgat caccagcgga attttacgtt tatgtagcgc cgcaatcagg ttaggccata
    10441 gttcggtttc cataatcaac accagtttag ggtcgacttt attcaggaaa cgattaagtg
    10501 catcgggcag gtcatacggc agataaacgt gctgaacatc cttcccgaaa gccgattgta
    10561 cgcgctccga accggttggc gtcatggttg taacggtaat cggtaaatca ggataacgat
    10621 gacgcagcgc gcgcaccaac gggatcaccg ccagagtttc accgacggag acggagtgca
    10681 gcataatgcc gcctggtttt agcggatggc ggtaaaaacc gtaacgttca ccccagcgtt
    10741 ttcgataggc cggagcctta cgtccgcgca cccagagccg tatccagatc agcggctgaa
    10801 taaggtagag aagggcggtg taaagcaatt cgagcatagt aaatagctga cttatggatg
    10861 tgctggggat tctatgtatt tagctgtggc tttaccatta cttttcccgt ttttgactta
    10921 aatagcaatt tacccgccaa ttcttgctga acatctatac tttttttgta tttttatgcg
    10981 attcattgat ttctgctgta cgtgcaggaa ggaatcgcag agcaacagtg aaagaatatg
    11041 gttgctaatg attttatttg attgatttct ttattgaaaa tcaacaatgt gcttaaaaat
    11101 cattcgggtc ggattgccgc gaaagaagtg atacactagc gcgtcaatat cagtgcggta
    11161 tcagtattca ggtagctgtt gagcctgggg cggtagcgtg ctttttctgc ttcaccttaa
    11221 tcggataatc tcaacaaaaa gagttacttg tggataagct atttcgaaga attttgctca
    11281 ttaagatgcg ttttcatggg gatatgttat taactactcc cgtcattagt tcgctgaaaa
    11341 aaaattaccc tgacgcaaaa atcgatgtgc tgctttatca ggacaccatc ccgatcctgt
    11401 ctgaaaatcc agagattaac gcgctctacg gcataaaaaa taaaaaagca aaagcctcag
    11461 aaaaaattgc caactttttt catctcatca aggtattacg tgccaataag tatgacctta
    11521 tcgtcaatct caccgatcaa tggatggttg ctatactggt tcgcttatta aatgcccgtg
    11581 tgaaaatttc ccaggattat catcatcggc agtctgcttt ttggcgtaaa agtttcaccc
    11641 atttggtgcc gttgcagggt ggaaatgtgg tggaaagtaa cttatccgtg ctgaccccat
    11701 tgggagttga ttcgttggtg aagcagacaa ccatgagtta cccgcctgca agctggaaac
    11761 gtatgcgtcg cgaacttgat cacgctggtg ttggacaaaa ttatgtggtt atccaaccta
    11821 cggcgcggca aatcttcaaa tgctgggaca acgccaagtt ttccgctgtg attgatgcct
    11881 tacatgttcg tggttatgaa gttgttctga cgtccggccc agataaagac gatctggcct
    11941 gcgtcaatga aattgcgcag ggatgccaga cgccaccagt aacggcgctg gctggaaagg
    12001 tgaccttccc ggaacttggt gcgttaatcg atcatgcgca gctgtttatt ggcgttgatt
    12061 ccgcaccggc gcatattgcc gctgcagtta atacgccgct gatatcgctg tttggtgcga
    12121 cagaccatat tttctggcgt ccctggtcaa ataacatgat tcaattctgg gcgggagatt
    12181 accgggaaat gccaacgcgc gatcagcgtg accgaaatga gatgtatctt tcggttattc
    12241 cggcggcaga tgtcattgct gctgtcgata aattactgcc ctcctccacg acaggtacgt
    12301 cgttatgatc gttgcttttt gtttatataa atattttccc tttggcggtt tgcagcgcga
    12361 ttttatgcgt attgctcaga cagtcgccgc ccgaggtcat catgttcggg tttataccca
    12421 gtcgtgggaa ggcgaatacc ctgatgtatt tgaactgatc aaagtgccgg ttaaatcgca
    12481 taccaatcac gggcgcaatg cggagtattt tgcctgggtg caaaaacatt tacgcgaaca
    12541 tcccgtcgat aaagtcgttg gattcaacaa aatgccgggg ctggacgttt attatgccgc
    12601 tgatgtttgt tatgccgaga aagtcgcgca ggaaaaaggc tttttctatc acctgacgtc
    12661 acgttatcgc cattatgccg cctttgagcg ggcaaccttc gaacagggaa agccgacaca
    12721 gctgctgatg ctgacagata agcaaatcgc cgatttccag aaacattatc agactgaagc
    12781 ggagcgtttt catattctgc caccggggat ttatcctgat cgtaaatata gccagcagcc
    12841 agctaatagc cgtgaaatct tccgtaagaa gaatggaata accgaacaac aatatttatt
    12901 gttgcaggtc ggttcagact tcacgcgtaa aggtgtcgat cgttccattg aagcacttgc
    12961 ttcgttaccg gattcgctgc gtcacaacac attgctatat gttgttggac aggataaacc
    13021 gcgaaaattt gaggcgctgg cagaaaaacg cggcgtgcgc agtaatgttc acttcttctc
    13081 ggggcgcaac gatgtctcgg aattaatggc ggcggcggat ttattactgc atcctgccta
    13141 ccaggaagca gcgggaattg tgctactgga agcgattact gcaggattac cggtactaac
    13201 aacagccgtt tgtggctatg cgcattatat tgtcgacgcc aattgcggcg aggctattgc
    13261 tgagccattc cgccaggaaa cattgaatga gattttacgc aaagcgttaa cgcaatcttc
    13321 attgcgccag gcctgggcgg aaaatgcgcg acattatgct gatacacaag atttatacag
    13381 tctgccagag aaagcggcgg atatcataac gggtggtctg gatggttgaa cttaaagagc
    13441 cgtttgccac gttatggcgc ggtaaagatc cttttgagga agttaaaacc ttgcagggtg
    13501 aggtttttcg tgaactggaa actcgccgca ctctgcgatt tgaaatggcg ggcaaaagct
    13561 attttctcaa atggcatcgc ggcacgaccc tgaaagagat aatcaaaaat ttactctcat
    13621 tgcggatgcc agtattaggc gcagaccgcg aatggagtgc gattcatcga ctgcgggatg
    13681 tcggcgttga tactatgtat ggggtggcat ttggcgaaaa aggtattaat ccgctgagca
    13741 gaacctcgtt tattattacc gaagatctga ccccaaccat cagtctggaa gattactgtg
    13801 ctgactgggc gactaaccca ccagatgttc gcgtaaagcg tatgcttatt aagcgtgtcg
    13861 cgacgatggt gcgtgatatg catgctgcgg gcattaacca ccgtgactgt tatatctgtc
    13921 atttcctgct gcacttgcct ttttccggta aggaagagga gttaaaaatt tcggtaattg
    13981 acctacaccg ggcgcagctt cgcacgcgcg ttccacgtcg ttggcgcgat aaagatctta
    14041 tagggcttta tttttcttca atgaatattg gcctgactca gcgggatatc tggcggttta
    14101 tgaaagtgta ttttgccgcc ccgcttaaag acattctcaa gcaggaacaa ggactgctgt
    14161 cgcaagcaga agcaaaagcc acaaaaatca gggaaagaac gattcgaaaa tcgttgtaat
    14221 ttccggagag aaatatgagt gcccactatt ttaatccaca agagatgatc aataagacaa
    14281 tcatcttcga tgaaaggcca gcggcgtcag tagcatcatc attccatgtt gcttatggca
    14341 ttgataaaaa ctttcttttt ggttgtggtg tttcaatcac gtcagttttg ttacataaca
    14401 acgacgtgag ttttgttttc cacgttttta ttgatgatat ccctgaagcc gatatccagc
    14461 gtttagccca attggcgaaa agctatcgta cctgtatcca gatccatcta gtaaattgtg
    14521 aacggcttaa ggcattaccg acgaccaaaa attggtctat tgccatgtat ttccgttttg
    14581 taattgcaga ttactttatt gatcaacaag ataagatcct ttacctggat gctgatatcg
    14641 cctgtcaggg aaacttaaag ccgctgataa caatggatct tgccaataac gttgctgctg
    14701 ttgttactga acgcgatgct aactggtggt cgttacgggg tcaaagtctg cagtgtaatg
    14761 aacttgaaaa gggctacttt aattcaggtg tcctgttaat taatacgcta gcgtgggcgc
    14821 aggagtccgt ttctgctaaa gcgatgtcga tgcttgctga taaagccatc gtttcccgtt
    14881 tcacctatat ggatcaagat atccttaatc ttatcctgtt agggaaagtt aaattcattg
    14941 atgctaaata caatacgcaa tttagtttaa attatgaatt aaaaaaatca tttgtttgtc
    15001 caattaatga tgaaaccgta ttaattcatt atgtcggccc gacaaaaccc tggcattact
    15061 gggccggtta tccaagtgcg caacctttta tcaaagccaa agaagcatcg ccctggaaaa
    15121 atgaaccgtt aatgcggcca gttaactcaa actatgctcg ttattgcgcc aagcataatt
    15181 ttaaacaaaa taaaccaatt aacgggataa tgaattatat ttattatttt tatttaaaga
    15241 taataaaatg aaattgagaa aagttaaatg aatgaattta taaaagaacg gttttcgtat
    15301 ttagcagata ataaaaaaga aaacgcccca gagctaaatg tttcctacgg tatcgataag
    15361 aattttttgt atggtgctgg cgtttcaatt tcttccgttt tgattaataa ttcagatatt
    15421 aattttgtct ttcatgtttt cactgattat gtggatgatg attatttaaa gtcatttaat
    15481 gaaacagcaa aacaatttaa tacctcaatt attgtatatt taattgaccc caaatacttt
    15541 gctgatctgc cgacgtcaca gttttggtca tacgcgacat acttcagggt attgtctttt
    15601 gaatatctga gtgaaagtat ttccacactg ctgtatctgg atgccgatgt tgtttgtaaa
    15661 ggaagcctga aacctctcac agaaattata tttaaagatg agtttgctgc ggtcattcct
    15721 gacaatgata gtactcaggc ggcatgtgca aaacgcctca acattcccga aatgaatgga
    15781 cgttatttca atgcaggcgt tatctatgtc aatcttaaaa aatggcatga agcaaatttg
    15841 acaccgtatt tactcaaact tttacgaggg gaaactaaat atggctctct taaatattta
    15901 gatcaggatg cgttgaatat cgcatttaat atgaataata tctaccttgc gaaggatttt
    15961 gatactattt ataccctgaa aaacgaactt tatgatcgta gtcatcgaaa gtatcagcaa
    16021 accattaccg ataaaacagt gttgattcac tatacaggga taactaaacc atggcatagc
    16081 tgggctggat atccgtctgc atcatacttt aatatcgcgc gtgaacaatc tccctggaag
    16141 aaatatcctc ttaaagaggc gcggactgtt gcagaaatgc agaaacaata taagcatctg
    16201 tttgcccatg gtgagtatat aaaaggcata acttcattaa ttaagtacaa gcttaagaaa
    16261 taaattactc ttatgattac aagtatacgt tatcgcggct tctcatttta ttacaaagat
    16321 aatgataata aatataaaga aatctttgat gaaatactgg cctataattt taaaacagta
    16381 aacgtattat gtaatattga tgataccaaa gtatcgttga ttgatacgaa atatggtcgc
    16441 tatgttttta aagtctttgc tccgaaaacg aaaaggaatg aacgtttttt aaaatctttt
    16501 gtaaaaggtg actactatca gaatttgatc gttgaaaccg atcgtgtcat aagtgcaggt
    16561 cttacttttc ctaatgattt ttattttctg gctgggcgta aaattttcaa ctatgccagt
    16621 gtttttatca tgcttatcga gtatgtcgag ggcgtagagc tcaatgatat gccgattatt
    16681 ccagaaaatg ttaaagcaga aattaaggct tcaatggaaa aattgcatgc cttaaatatg
    16741 ctatcgggcg acccacaccg gggtaacttt atcgttagta aagatggtgt caggataatt
    16801 gacctatccg gtaaaagctg tacggcagag cgtaaagctc gtgatcgtct ggccatggaa
    16861 cgtcacctgg gtattgccaa cgaaataaaa gattatggct actattcagt aatctacaga
    16921 accaaactac gcaaatttat taaaaaatta aaaggcaaag cgtaaaccac acagtcaaaa
    16981 cggaaccaac atggatttat tagctgagag tattactgaa gtcgctgtct ctggggaaat
    17041 tgctaacacc gatcgtgtgt taaatatcgc ttacggtatt gaccgtaact ttttatttgg
    17101 tgcggcagta tctatgcaat cagttgttat gcataacccg gaccttgcgg ttaagtttca
    17161 tctctttacc gactacattg atgaagatta tctacaacgt gttaatgctt ttaccagcaa
    17221 aaatgctaac gttgaagtaa taatttataa agtctccaat gcctttattg atatcttccc
    17281 cagcctgaaa cagtggtctt atgcaacatt cttccgttta gttgcgttcc agtatttgag
    17341 tgaaactatt gaaaatctgt tatatatcga tgctgatgtc atctgtaaag gctcattagc
    17401 tggattgctt gatattaatt ttgatgagga taagttcgca gctgttatta aagatgtgcc
    17461 ttttatgcag gaaaaaccag cgaagcgtct ggctatagag ggacttccag ggaattattt
    17521 caacgccggt gtagtatatc tgcagcttga agcatgggcg aaaaatgatt ttatgaataa
    17581 agccattgct atgctggcaa gtgacccgca gcacacgaag tataaatgcc ttgatcagga
    17641 tattttaaat attctgttct ttggtcattg taattttatt agcggcgatt atgattgctt
    17701 ttatggcatt gactatgagt taaaaaataa aagcgatgaa gattataaaa agaccattac
    17761 cgatgatact aagctgattc attatgttgg cgtaacgaag ccctggaacg actggacgaa
    17821 ttatccctgc cagaagtatt ttaatgaggc ttatcaggct tcttgctgga atgatgtggc
    17881 gtttattcca gccacgaatg aaaagcagta tcaagtgaaa tatcaacatg caaagaaaaa
    17941 tggtgatacg tttaacgctt ttatttactt cattaaattt aaattaaata agtataaaag
    18001 aaaactattt ggataataat aaaaatcatg gatgtctgag ttacaataat aattaaggat
    18061 gagtactatc atattttatt agttcaggca agagaacacg atgagcaatg attacccttt
    18121 agtatccata ataataccga cgtataattc atctgattac attactgaaa ctctaacgaa
    18181 attagaaaaa caaacttacc caaattttga aattgttatt gttaatgatg gttctaaaga
    18241 taacacatca aacgttttga gagagtatgg gttaacccac tctcgattaa ttattatcaa
    18301 taaagaaaat ggcggtgttt cgtctgccag gaatacaggt atccgcaagg cgcaaggaca
    18361 gtttatatgt tttatggatg atgatgatga gatagatcct aactatctgc tgaagatgta
    18421 taccagacaa catgagacgg gaggggatgc gatttattgt gggctttatg gccattatat
    18481 aaaagatggt gttacttact cacctataaa tacagagttt aatgaaggat ctttactttt
    18541 cgactttttt tataaaaagg ttagattcca tatagggtgc ttgtttataa gaaaacaact
    18601 tctggaagag aataatcttt tttttgatga agatttacga ctaggagaag atcttgattt
    18661 tatctatcga ctgctaatta catgcgatat gtatgcggtt ccatattata tgtataagca
    18721 taactataga gaaaattcct taatgaactc atgtagaacc atcactcatt atcgacatga
    18781 gtcatttgcg cacgaaagaa tctactcttc tgtgatgcag ttatacaaag gtaaccggaa
    18841 agaagaaatt catacattat tgagtcaaaa tagagcttat cataaaactc gttatttatg
    18901 gaatgttcta cttaatggtg attttaaact attgaatcaa ttagttgaaa gcaatgaaaa
    18961 agaattaaga gattgtaatc ttcctggcaa gagagataag agacgagcaa aaatattagc
    19021 atcaaaaaat tatattctct ggaggatggt aagactggta aatagaaaaa agaataaacg
    19081 ttagatcttg cattaaataa cccatcctcg tagcataggt tgaaattata tgtcgttttg
    19141 ttggaatgaa attaattctg gtataaagtc tttaattctc atattatgta ttttttcttt
    19201 aatgactttg tctttatggg atgatgttgc aacaaagttt cttcatgcag ctggaattat
    19261 atctgcattg tattttcttg cgacaccaaa aaaaacaata actaataatc ctactttgtt
    19321 aattttcatc tcattatgtc ttttgggtat cgtaaatatc atctggtatt cacattataa
    19381 agtttcaggc tctgtttata ccaatgcata tcgtggccca atggaaacag gaaaaattgc
    19441 cttgtgtagc gcttttattt tcttagttct ttttgctaaa aatgagatga gaacaaaaat
    19501 aaaatttggg aaactaattc tgttcgcatc cctggcaacg cagttacttt tttttgcgca
    19561 tgccatgtgg caacatttct atttaaacgt cgaccgtgtt gcattatcag cttcccacgc
    19621 tacaacagca ggctacatca tcctttttcc ttctttactg gcatcaattc tcattttaaa
    19681 atccgacttt agacataaaa caacattata tacaattaac ttcatgctta gcttatgtgc
    19741 tgtcatagta actgagacgc gtgcagccat attagtgttt ccattctttg cgttaatatt
    19801 aatcgtaatg gatagttata ttaataagcg aattaattat aagttatatt gttttattgc
    19861 gattgcatta ttagcaggtg tattttcttt taaagataca ttgcttatga gaatgaatga
    19921 cttaaataac gatttagtta attattcgca tgataacacc agaacttcag tcggtgcccg
    19981 tctggcaatg tatgaagttg gcttaaaaac atattctcca ataggacaat cactggaaaa
    20041 acgtgcagaa aaaatacatg agctagaaga aaaagagcct agattgagtg gcgctttacc
    20101 ctttgtagat tctcatttgc ataacgatct catagatacg ttatcaacgc gtggtattcc
    20161 tggagttgta ttaacaattt tagcattttc agcaatactc atatatgcct taagaactgc
    20221 taaagaacct tatattttaa tcttgctttt ttcactactg gtagtaggcc taagtgatgt
    20281 aatactcttt tctaaaccgg ttccgactgc tgtgtttgtc accataatat tgctttgtgc
    20341 ttattttaaa gcacaatcag accaatattt attagataag taatgaatat atgaaataaa
    20401 atcagcaagg aggctgattt tatttcaaaa ttatctatta aggggttgta atttaaatca
    20461 tagcagcgtt ttcagcgttt tcttcaatga atcgcttaac agcatttgct gtcaattgag
    20521 acaactcatt ccccggagcc ctacaaacca tctgattctt cccataccca ccaattaatc
    20581 ccggatcggt tggtccataa accgtgatat tgggtctatc cagtgccgcc gttaaatggc
    20641 ttaaccccgt atccaccgac actacaaatt tagccccggc cagcacgcgg gcaacgcctt
    20701 ccagactcat cttcggcaat acttcaacat aatcaaatcc ttccgccagt cgtttcgccc
    20761 gttcttcctc atgcggcgcg ccccacggaa gtttaatccg tattcctgaa tcagccagta
    20821 aaccaatcaa ttctcgccag tgttcttccg gccagtgttt atcatcacgg gtcgtcgcat
    20881 gaagaaatac ggcatattcg ccagcatctg taggcaggtt cgtcagaaaa tgctgtgcga
    20941 tagcataatc gccctgggtt tgcggtttgc tatagcccaa acttttggca aacagttcgc
    21001 gggtgcgttc tacggcgtgc tgctgttttg caatatgatg cttacaattg taaaacaggc
    21061 tggctaaagg ttcgcgagcg gtttgccagt ccaatccatg ctttacgcca tgcgccagac
    21121 gtgtcaccag tgccgcgctt tttaccagcc cctgagcgtc gataactgcg tcatagttct
    21181 ctgcttgtag cgcttcacga aacgctttgc gttcagcttt tatgggggcc gagaaccagg
    21241 ctttacgcca gcgacgtatt gccacaggaa taactcgctc aacggcagcg tgccaggaag
    21301 gaatctgtgc gaacccttct tccaccaccc agtcaaactt aatccctggg attgcctgct
    21361 gggcatcagt gagtgcgggc aacgtatgga gaacatcgcc catcgacgat gttttaacga
    21421 tcaaaacccg catccgtcag gcttcctctt gtaacaatag cgtgttgagt tcttccagta
    21481 cgcgctgggg agtaatgtcg atcaagctct ggtgataacc ctccgcagcg tcacctttac
    21541 gcactttgtg atagccggta atcagacgga tcacgcgcgc tttatgggat agcggcggtg
    21601 tgaagtccgg gctacttgga ccatacaggg caaccagcgg acgattgagc gccgccgcaa
    21661 cgtgcatcag gccagaatcg ttagtgacaa tggctttaca ggctgcaatc aggataaccg
    21721 cttgatcaag ctgtgtttcc cccgccaggt tccgacacca tgcctgctgc tcggtattca
    21781 aagcggcaag aatctcattg cccgcttcat gatctttcgc agagccaaac agaaccacct
    21841 gataaccttc atcaatcagc tgctttgcca gttccgcata gtggtagtgt ggccagcgtt
    21901 ttgccggacc aaactccgca cccgggcaaa agccaatcat cggacgttct gatgaaagcg
    21961 aaaattgatt acaggtatat gatttttcac cttcgctcac ctgcaactgc ggccataaca
    22021 atggctgcgg cagatcttgt gcggtacgca taatgccttt gtcataggcc agcgcgacat
    22081 agcgttccac cattagcggc caggcttctt tatcgagcac gcgtacatcg ttgagtaaac
    22141 cgtagcgcat ctcgccgcgc cagccggtgc gatgaggaat acccgcgaag aaaggcacta
    22201 atgcagattt gaaggagttg ggtaagacgt aggcgcggtc gtagcgcttt tcacgcaggc
    22261 tatgacccag tttgcggcgt tcgccgattt ccagcgctcc gtgaccgaga ggcataggga
    22321 tagcttcgtt aacttccggc atccgcgata ataatggacg gcaccatgcc ggtgccatca
    22381 catcgattat cgcctgggga tagcgcgcct ggagcgtgcg atagagactt tgcgacatca
    22441 tcatgtcgcc aacccaagac gggccgatca ccagtatttt catgcagagc tcttatgcgt
    22501 cgcgattcag ccaggccatg tattccgtta caccttcagc aacggttttg aacggtttgt
    22561 cgtaacccgc cgcgcgcaga tttgtcagat ctgcctgagt gaacgcctgg tagcggcctt
    22621 tcagcttatc cgggaacgga atgtattcga tctggccttt cttgtgataa gccagagtag
    22681 catctgctac ggcctggaag gattccgcac gaccagtacc gaggttgaag ataccggaaa
    22741 cgccattttc caggaaccac aggtttacat ctgccacgtc gcccacatag acgaagtcac
    22801 gtttgaagtt ctcgctacct tcaaacagct tcggtgattc accgttgtta agctgagtgt
    22861 tgagatggaa agcgacgctc gccatgctgc ctttatggcc ttcacgcggt ccataaacgt
    22921 tgaaatagcg gaagccaaca atctgcgagt tcgcttcagg caggatttgg cgaacatatt
    22981 catcaaacag gaattttgag taaccgtaga cgttcaacgg tttttcgtac tcgcgggatt
    23041 caataaagtc ggaggtgcgt ccgccgtagg tggctgcgga agaagcgtac aggaacggga
    23101 tttcgcgctc taggcagtag tgcagcagct ccttggagta ttgatagttg ttatccatca
    23161 tatacttgcc gtcccactcg gtggtggaag agcatgcgcc ttcgtggaaa atcgcttcga
    23221 catcgccgaa ctcttcgcca gccataatct ggatcaggaa gtcttcctta tccatatagt
    23281 ccgcgatatc cagatccacc aggttcacaa acttggtgcc gtctttcagg ttgtccacca
    23341 ccagaatatc ggtgatgcct ttatcattca gggccttaac gatgttgctg ccgataaagc
    23401 ccgcgccgcc ggtaacgatg atcataactg taaccttcga attatggagt cagagacaat
    23461 ctcagacacg aatacttcta tcatatcact atacggcgtt ggcttcagcc attcgccaaa
    23521 agtgagattg atggacgtta tttatcctga attttgcaga agtgttaacg cgtcatctcg
    23581 tcgcgacgta taagtttggg taatatgtgc tggaatttgc cctgtctgga gaatcgcaat
    23641 gcgtggagaa ttttatcagc agttaaccaa cgatctggaa accgcacggg cggaagggtt
    23701 gtttaaagaa gagcgcatta ttacgtctgc gcagcaagca gatatcactg tggctgatgg
    23761 aagccacgtc attaactttt gtgccaacaa ctatctcggg ctggcgaatc atccggatct
    23821 gattgcggca gcaaaggcgg gaatggattc tcacggtttc ggcatggctt cggtgcgttt
    23881 tatttgcggc actcaggaca gccataaaga gcttgaacaa aaactggcgg cattcctggg
    23941 gatggaagat gcgattctct actcttcctg ctttgatgct aacggtggac tgtttgaaac
    24001 gctgctgggt gcggaagacg ccattatctc cgacgcactg aaccacgcgt ctattattga
    24061 tggtgtgcgt ctgtgcaaag ctaaacgcta tcgctatgcc aacaacgata tgcaggagct
    24121 ggaagcacgt ctgaaagaag cgcgtgaagc cggtgcgcgt catgtgctga ttgccaccga
    24181 tggtgtgttc tcaatggacg gcgtgattgc caacctgaaa ggcgtttgcg atctggcaga
    24241 taaatacgat gccttggtga tggtggatga ctcccacgcg gtcggttttg tcggtgaaaa
    24301 tggtcgtggt tcccatgaat actgcgatgt gatgggccgg gtcgatatta tcaccggtac
    24361 gcttggtaaa gcgctgggcg gggcttctgg tggttatacc gcggcgcgca aagaggtggt
    24421 tgagtggctg cgccagcgtt ctcgtccgta cctgttctcc aactcgctgg caccggccat
    24481 tgttgccgcg tccatcaaag tactggagat ggtcgaagcg ggcagcgaac tgcgtgaccg
    24541 tctgtgggcg aacgcgcgtc agttccgtga gcaaatgtcg gcggcgggct ttaccctggc
    24601 gggagccgat cacgccatta ttccggtcat acttggtgat gcggtagtgg cgcagaaatt
    24661 tgcccgagag ctgcaaaaag agggcattta cgtcaccggt ttcttctatc cggtcgttcc
    24721 gaaaggtcag gcgcgtattc gtacccagat gtctgcggcg catacccctg agcaaattac
    24781 gcgtgcagta gaagcattca cgcgtattgg taaacaactg ggcgttatcg cctgaggatg
    24841 tgagatgaaa gcgttatcca aactgaaagc ggaagagggc atctggatga ccgacgtccc
    24901 tgtaccggaa ctcgggcata acgatctgct gattaaaatc cgtaaaacag ccatctgcgg
    24961 gactgacgtt cacatctata actgggatga gtggtcgcaa aaaaccatcc cggtgccgat
    25021 ggtcgtaggc catgaatatg tcggtgaagt ggtaggtatt ggtcaggaag tgaaaggctt
    25081 caaaatcggc gatcgcgttt ctggcgaagg ccatatcacc tgcggtcact gtcgcaactg
    25141 tcgtggcggt cgtacccatc tgtgccgcaa cacgatcggc gtcggcgtta accgtccggg
    25201 ctgcttcgcc gaatatctgg tgatcccggc gttcaacgcc ttcaaaatcc cagacaatat
    25261 ctccgacgac ctggcttcca tttttgatcc cttcggtaac gccgtgcata ccgcgctgtc
    25321 gttcgatctg gttggcgagg atgtgctggt ctctggtgca ggtccgatag gtattatggc
    25381 tgcggcggtg gcgaaacacg ttggtgcacg caatgtggtg atcactgatg ttaacgaata
    25441 ccgccttgag ctggcgcgca aaatgggtat cacccgtgcg gttaacgtcg cgaaagaaaa
    25501 ccttaatgat gtgatggctg aactgggcat gaccgaaggc tttgatgtcg gtctggaaat
    25561 gtccggtgcg ccgccagcgt ttcgtaccat gcttgacacc atgaaccacg gcggccgtat
    25621 tgcgatgctg ggtattccgc cgtctgatat gtctatcgac tggaccaaag tgatctttaa
    25681 aggcttgttc attaaaggta tttacggtcg tgagatgttt gaaacctggt acaagatggc
    25741 ggcgctgatt cagtctggcc tcgatctctc gccgatcatt acccatcgtt tctctatcga
    25801 tgatttccag aagggctttg acgctatgcg ttcgggccag tccgggaaag taattctgag
    25861 ctgggattaa cacgaacaag ggctggtatt ccagcccttt tatctgggga taatctgttg
    25921 aatatgtaaa atcctgtcag tgtaataaag agttcgtaat tgcgctgatc tcttatatag
    25981 ctgttctcat tatctctcta ccctgaagtg actctctcac ctgtaaaaat aatatctcac
    26041 aggcttaata gtttcttaat acaaagcctg taaaacgtca ggataacttc agaggtcgtc
    26101 ggtaatttat gatgaacagc accaataaac ttagtgttat tattccgtta tataatgcgg
    26161 gcgatgattt ccgcacttgt atggaatctt taattacgca aacctggact gctctggaaa
    26221 tcattattat taacgatggt tcaacggata attctgttga aatagcaaag cattacgcag
    26281 aaaactatcc gcacgttcgt ttgttgcatc aggcgaatgc tggcgcatcg gtagcgcgta
    26341 atcgtgggat cgaggtggcg acgggcaaat atgtcgcttt tgtcgatgct gacgatgagg
    26401 tctatcccac catgtacgaa acgctgatga ccatggcgtt agaggacgac ctcgacgtgg
    26461 cgcagtgcaa cgctgactgg tcttttcgtg aaacgggaga aacctggcaa tccatcccca
    26521 gcgatcgcct tcgctcaacc ggcgtattaa ccggcccgga ctggctgcgg atggggcttt
    26581 cttcgcgccg ttggactcac gttgtctgga tgggggttta tcgccgtgat gttattgtta
    26641 aaaataacat taaatttatt gccggattac atcatcagga tattgtctgg acaacagaat
    26701 tcatgtttaa cgcgctgcgt gcgcgatata ccgagcaatc attatataaa tattatctgc
    26761 ataatacgtc agtgagtcgg ttgcatagac aagggaataa aaaccttaat tatcaacgtc
    26821 actatattaa gattacccgc ctgctggaga aattaaatcg aaattatgct gacaaaatta
    26881 cgatttatcc ggaatttcat cagcaaataa cttacgaagc attgcgtgtt tgccatgcgg
    26941 tgcgcaaaga gccggatatt cttacccgcc aacggatgat tgccgagata tttacttccg
    27001 gtatgtataa gcgcctgatt accaatgtgc gcagcgtgaa ggtcggttac caggcgttac
    27061 tgtggtcttt ccgcttatgg caatggcgcg acaaaacgcg gtcgcaccat cgcattacgc
    27121 gtagcgcctt taatttgcgc tagcgttaaa cttcgccgct tcgggctgtt taccccagcc
    27181 ttgccactga tgctggaagt aaacgatcag cgtgctctgg ctgatgcttt cgcttaatac
    27241 ttcaaagaag cgattagcat aaacaggttc tatcggtttc ttcggtttgc acagcttcac
    27301 gccacggaac ggattacgcg gtgcatcagg cacagcgttt ttcggcggtg tagaagtatc
    27361 aacctgcggt tcattcagca agctgctggc tttcaccagc gtaatgtctg gcggcaggtt
    27421 ataaaccatc tgttgtagca cgcgtaccgt taaagggtga ggatgcccaa tggcaatggt
    27481 tgaaccgttg cgacgcgcca gatcaattgc gcgattaaat tgcacacgga tgtccgcttc
    27541 gttctgcgaa tcgtcgagga acaccttccg tttaataacc ttcacgccag taccttgcgc
    27601 ggcgcgcatc gcctgggtat taccgatggt tacgctgtcg aggaagtaaa gattgtaacg
    27661 ctccagtgcc tgcatcactt tctgcatacc aaacaggtta gaggtcatct tgctacccat
    27721 gtggttgttg atccccacgg catagggcac gttattgacc gcactacgaa taatgcgctc
    27781 aatttcgtcg ctgctcatct ccgggcgcag cgtatttttc tccagcggct gtttactcag
    27841 tggtgccatc gggagatgaa tcaacacttc gtgcccgctg ttatgcgctt tggtcgccat
    27901 ctctctggcg tgcggtgaat cgggtaatac agcgacggag atagcggagg gcatcgccag
    27961 cacctggttt tcgttgtgcg ggcgataccc aaaatcatca atgacgatgg caagtttgcc
    28021 agcaagtacg ggggaggaga gcgccaacag agcggcaaat gcaagaacgt tacgacgaaa
    28081 tggaaacaaa acttatcttc ccaaccacgg ctgtggattg accgcctgac cctggcggcg
    28141 aatttcgaaa tagagtgaag gccgaccctg accgccactg ctgcccacca gtgcaattgg
    28201 ctggcccgcg cgaacctgcg aaccaacgct caccagtgcg ctctgattat agccgtaaag
    28261 actcatgtcg cctttaccgt gctcaaccac caccaccaga ccgtaacctt gcagccagtc
    28321 agccagaatc actcgaccgt cggcaattgc tttaacttca gtaccttcag aggcaccgat
    28381 aaccatccct ttccagcgta attcaccctg tagctgctcg ccatagcgat gcagcgtcgg
    28441 cccgcgaacc ggccagaatg cctgaccacg cggcgcaccc agaccaccag ttcgggacat
    28501 cagcgatttt tcgctttcgg tcggtttgta ggtggtgcct ttgcgcgtcg cttctttctg
    28561 gcggtcgcga accgcctggg cctcacgcgc ttctcgttca gcacgcgctt tcgccgcggc
    28621 ttccgcacgg gcaatgctgt tacgcagacg ggattcgttg gcacgcagtt cacttagctg
    28681 ctgctgacct tgctggatgg aagattccag ccccgccagc gtctttttac gctcgttcag
    28741 agcctgagtc agtttcgcct gttgggcgcg ctgttcatat aacagcgttt gttgctcgct
    28801 ttgtttctct tccagttcag cacgctgcat ggcgacttct tcacgcgttt gcttcaactg
    28861 ggcaatggtt tcttgtcgcg cctggttgag atagccgaaa taagcctgta aacgctgtcc
    28921 acactggctt tcttcaccgc tgagaattag ctgaataccg gtatgctcgc cctgacggaa
    28981 tgcggcatcc agttgtgcgg cgaggctgcg ctcctgggcg gctttttgct gctccagttt
    29041 ggcaatcgac gcgttcatct catcaatctg tttattgagt tgattgagcg tgttttgcgt
    29101 ttcgcgcagc ttacgggtgg cttcagagat cgcttcttcc tgctttttca attgtgcgag
    29161 caggcttgcg cgttgttgtt gcttttggcg taccgcgcgc tcttttgcgg cgatatcggc
    29221 ctgaatagat ttgagttggt cacgctcatc cgcgtgggcg gaaaaggcgc acaacaatac
    29281 gccagcgcta agaacgctgg cgtagatgat gggcctgatt gcaaacctgc gcggtttcac
    29341 ggcccgtgtc atggtattaa tcgcctttcc cctcatgggg agggattatt ccacgatgaa
    29401 cagcggctta ccagtcatct cttgcgggat ttccataccc atcagcgaca acatggtcgg
    29461 cgcgatgtca gaaagtttgc cgcctgcaac cgctttcacg ttcttatcac caacgtaaat
    29521 cagcggaact ggcaggttgg tgtgtgccgt gtgtgcctga cccgttgccg gatcgcgcat
    29581 ctgttcagcg ttaccgtggt cagcggtgat cagcagttgt ccacccacgg actcaaccgc
    29641 tttcgcgact tcttccacgc agtgatccag tgcttcaacc gctttaaccg ccgcttccat
    29701 caccccggtg tgacctacca tgtcgccgtt cggatagtta cagataatgg tgtcgtattt
    29761 gccgctcttg atggccgcaa ccagtttttc ggtcagctct gcggagctca tttccggttg
    29821 cagatcgtag gtagccactt tcggtgagtt gatcagaatg cgatcttcgc ctttgaatga
    29881 ctcttctacg ccaccgttga agaagaaagt aacgtgggca tatttttcgg tttcggaaat
    29941 acgcaactga gttttgtcgt ttttcgccat ccactcgccg aaggtgttaa ccagggaagc
    30001 gggtgggtaa gcaaccgcag ttttgatgtc agcggcgtat tcggtcagca tcacgaaatc
    30061 gacgttaacc actttcttac gcgcgaagcc gtcgaaatct gcgtttacga atgcacgagt
    30121 gatttcgcgc gcgcggtcag cacggaagtt catgaaaatc agcgcatcgc cgtcttccat
    30181 tgccgcatct ggctgacctt ctgcacgaat aacggtcgct ttcacgaact cgtcgttttc
    30241 gtcgcgagca taagctgcct gcaaaccagc aacggcagta tcggcctgga actcaccctg
    30301 cgccagagtc agcaggtcat aggctttttc aacgcgatcc caacggttat cgcggtccat
    30361 cgcgtagtaa cgaccaatga tggacgctac gcggccttta cccagcgcag caaatttctc
    30421 ttcaaatttt ttcagcgagg attcagcact gcgcggcggg gtgtcgcgac cgtcaaggaa
    30481 tgcgtgcagg tagatttttt ctgcgccgcg ttcagctgcc agttctacca tcgccatgat
    30541 gtgatcttcg tggctgtgta cgccgcctgc ggagagcaga cccataatgt gtactgcttt
    30601 acctgcgttt ttcgctttat ctaccgcgcc agtcagcact ggattagcaa agaaagcgcg
    30661 atctttgatt tcaacgtcca gacgagtcag gtcctgatac acgatgcggc cggcacccag
    30721 gttaacgtgg cctacttcgg agttacccat ctgacggtca ggcagaccga cttccagacc
    30781 ggaagcgtcg atcagggtat gcggacgatt ggcccacagt gcatccatta ccggggtttt
    30841 agcactaaaa atggcgttat cctgctgttc ttcacgatag ccatagccat ccagaatcac
    30901 cagtaccata ggttttttag aaaccgacat tgcgacaacc tcatactcaa gagtcaaaat
    30961 ttgcgtaatt ttactacagc tgaatcgata aaatagcctc tgaagatcaa aatatacgac
    31021 cgctcgcggc aagccgatgc cagatttgcg cttttttttc gtcgtgcccc gcaaaattgc
    31081 attccagtta acgcgctggc tgtatttgcc gcaccgcgca ggtatactcc tttcctggtt
    31141 tttttaatca ctacgtcggg agttgttacc ccccatgcaa gaaattatgc aatttgttgg
    31201 ccgtcatccc atactgagta tcgcctggat cgcgttactg gtggcggttc ttgtgactac
    31261 gtttaagagc ctgacctcga aagtgaaggt gattactcgt ggtgaagcta cgcgtctgat
    31321 caacaaagaa gacgctgtgg ttgtggattt acgtcagcgt gatgacttcc gtaaaggcca
    31381 tatagcaggt tctatcaatc tgttgccgag cgaaatcaaa gccaacaatg ttggtgagct
    31441 tgagaagcac aaagacaaac cggttatcgt ggtagacggt tctggcatgc agtgccagga
    31501 gcctgcaaac gcgctgacga aagctggttt tgcgcaagta ttcgtgctga aagagggcgt
    31561 tgctggctgg gctggcgaaa acttgcctct ggtgcgcggc aaataattta cctgtcgtct
    31621 ttcatgatgc aggccgttag ctgcaattag gcccccagcg acttattgtt ataagcttct
    31681 ggggacactc cattttgcag ccgccctgca acatgaaatt tcagggtaaa aaaacaggag
    31741 ctaaattatg gccaatgttg aaatctatac caaagaaacc tgcccgtatt gccatcgtgc
    31801 aaaagcactg ctgagcagca agggcgtgag ttttcaggag ttgccgatcg atggcaatgc
    31861 cgccaagcgt gaagagatga tcaaacgcag cggtcgcacc acggttcccc agatttttat
    31921 tgacgcacag cacattggcg gctgtgatga cttgtatgca ttggatgcac gtggtggact
    31981 ggatcccctg ctgaaataac gtgtgaacgt tggcattaca ttgcgcagta tttaaggaca
    32041 acacttaagg gttttctaca catgtcagaa caaaacaaca ctgaaatgac tttccagatc
    32101 caacgtattt ataccaagga tatctctttc gaagcgccga acgcgccgca cgttttccag
    32161 aaagattggc aaccagaagt taaacttgat ctggatacgg catcttccca actggcagat
    32221 gacgtatacg aagtggtact gcgtgttacc gtaacggcct ccctgggcga agaaaccgcg
    32281 ttcctgtgtg aagttcagca gggcggtatt ttctccatcg cgggtatcga aggcacccag
    32341 atggcacatt gcctgggcgc atactgcccg aacattctgt tcccgtatgc tcgtgagtgc
    32401 atcaccagca tggtatcccg cggtacattc ccgcaactga accttgcgcc ggttaacttc
    32461 gatgcgctgt tcatgaacta tttgcagcag caggctggcg aaggtactga agaacatcag
    32521 gatgcctgat gaaccaacgt aatgcttcaa tgactgtgat cggtgccggc tcgtacggca
    32581 ccgctcttgc cattaccctg gcaagaaatg gccacgaggt tgtcctctgg ggccatgacc
    32641 ctgaacatat cgcaacgctt gaacgcgacc gctgtaacgc cgcgtttctc cccgatgtgc
    32701 cttttcccga tacgctccat cttgaaagcg atctcgccac tgcgctggca gccagccgta
    32761 atattctcgt cgtcgtaccc agccatgtct ttggtgaagt gctgcgccag attaaaccgc
    32821 tgatgcgtcc tgatgcgcgt ctggtgtggg cgaccaaagg gctggaagcg gaaaccggac
    32881 gtctgttaca ggacgtggcg cgtgaggcct taggcgatca aattccgctg gcggttatct
    32941 ctggcccaac gtttgcgaaa gaactggcgg caggtttacc gacggctatt tcgttggcct
    33001 ctaccgacca gacctttgcc gatgatctcc aacaattgct gcactgtggc aaaagtttcc
    33061 gcgtttacag caacccggat ttcatcggtg tgcagcttgg cggtgcggtg aaaaacgtca
    33121 ttgccattgg cgcggggatg tccgacggta tcggttttgg tgcgaatgcg cgtacggcac
    33181 tgatcacccg tgggctggct gaaatgtcgc gtcttggcgc ggcgctgggt gccgagcctg
    33241 ccacctttat gggcatggcg gggctgggcg atcttgtgct tacctgtacc gacaaccagt
    33301 cgcgtaaccg ccgttttggc atgatgctcg gtcagggcat ggatgtacaa agcgcgcagg
    33361 agaagattgg tcaggtggtg gaaggctacc gcaatacgaa agaagtccgc gaactggcgc
    33421 atcgcttcgg cgtagaaatg ccaataaccg aggaaattta tcaagtatta tattgcggaa
    33481 aaaacgcgcg cgaggcagca ttgacgttat taggtcgtgc acgcaaggac gagcgcagca
    33541 gccactaacc ccagggaacc tttgttaccg ctatgacccg gcccgcgcag aacgggccgg
    33601 tcattatctc atcgtgtgga gtaagtaatg tcgtgtgaag aactggaaat tgtctggaac
    33661 aatattaaag ccgaagccag aacgctggcg gactgtgagc caatgctggc cagtttttac
    33721 cacgcgacgc tactcaagca cgaaaacctt ggtagtgcac tgagctacat gctggcgaac
    33781 aagctgtcat cgccaattat gcctgctatt gctatccgtg aagtggtgga agaagcctac
    33841 gccgctgacc cggaaatgat cgcctctgcg gcctgtgata ttcaggcggt gcgtacccgc
    33901 gacccggcag tcgataaata ctcaaccccg ttgttatacc tgaagggttt tcatgccttg
    33961 caggcctatc gcatcggtca ctggttgtgg aatcaggggc gtcgcgcatt ggcaatcttt
    34021 ctgcaaaacc aggtttctgt gacgttccag gtcgatattc acccggcagc aaaaattggc
    34081 cgtggcatta tgctcgacca cgccacgggc atcgttgtgg gtgaaacggc ggtaattgaa
    34141 aacgacgtat cgattctgca atctgtgacg cttggcggta cgggtaaatc tggtggtgac
    34201 cgtcacccga aaattcgtga aggtgtgatg attggcgcgg gcgcgaaaat cctcggcaat
    34261 attgaagttg gtcgcggcgc gaagattggc gcaggttccg tggtgctgca accggtgccg
    34321 ccgcatacaa ccgccgctgg cgttccggct cgtattgtcg gtaaaccaga cagcgataag
    34381 ccatcaatgg atatggacca gcatttcaac ggtattaacc atacatttga gtatggggat
    34441 gggatctaat gtcctgtgat cgtgccggat gcgatgtaat catctatccg gcatacagta
    34501 actaatctct caacaacgct cccggatatc ccagctgccg ccaggcttca tacaccacta
    34561 ccgacaccgc attggacaga ttcatgctgc ggctgtccgg caccatcgga atgcgaattt
    34621 tttgttcagc gggcagggca tcaagaatgc tcgctggcag gccgcgtgtt tccgggccga
    34681 acatcagata atcgccatcc tgatagctta cggcgctgtg agcaggcgta cctttcgtgg
    34741 tgagggcaaa caggcgctgg ggattttctg cttcgaggaa cgcgcgatag tcatgatgac
    34801 gcgtaacggc ggtaaactcg tgatagtcca gccccgcgcg gcgcaggcgc ttatcgtccc
    34861 aggcaaatcc catcggttcg atgatatgca gacgaaagcc ggtattagcg caaagacgga
    34921 tgatgttgcc agtatttggc ggaatttctg gttcgtaaag tacgatgttt agcatactgc
    34981 ccccttagtg cgggggcagg atagcagaaa attggtgaac cgtgcggcct tttcccctca
    35041 ccccggccct ccccctgtct cttgatcagg agatctgatc aagagacagc tccctgaggg
    35101 agagggt
//
LOCUS       DADMHC010000019        34988 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.019, whole genome shotgun sequence.
ACCESSION   DADMHC010000019 DADMHC010000000
VERSION     DADMHC010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 34988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34988
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.019"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..1239
                     /gene="dsdA"
                     /locus_tag="JNZ57_000754"
     CDS             <1..1239
                     /gene="dsdA"
                     /locus_tag="JNZ57_000754"
                     /EC_number="4.3.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine ammonia-lyase"
                     /protein_id="HAY8827073.1"
                     /translation="GTTSLAEGLPYVGLNEQDVQDAHARLSRFAPYLAKAFAETAATG
                     GIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISSSIKARGGIYEVLAHAEK
                     LALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHM
                     SADAWAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGY
                     SVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEP
                     THSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMVRLLDGFYTLS
                     DQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVW
                     ATGGGMVPEEEMNQYLAKGR"
     gene            complement(1347..2885)
                     /gene="emrY"
                     /locus_tag="JNZ57_000755"
     CDS             complement(1347..2885)
                     /gene="emrY"
                     /locus_tag="JNZ57_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter permease
                     subunit EmrY"
                     /protein_id="HAY8827074.1"
                     /translation="MAITKSTPAPLTGGTLWCVTIALSLATFMQMLDSTISNVAIPTI
                     SGFLGASTDEGTWVITSFGVANAIAIPVTGRLAQRIGELRLFLLSVTFFSLSSLMCSL
                     STNLDVLIFFRVVQGLMAGPLIPLSQSLLLRNYPPEKRTFALALWSMTVIIAPICGPI
                     LGGYICDNFNWGWIFLINVPMGIIVLTLCLTLLKGRETETSPVKMNLPGLTLLVLGVG
                     GLQIMLDKGRDLDWFNSSTIIILTVVSVISLISLVIWESTSENPILDLSLFKSRNFTI
                     GIVSITCAYLFYSGAIVLMPQLLQETMGYNAIWAGLAYAPIGIMPLLISPLIGRYGNK
                     IDMRLLVTFSFLMYAVCYYWRSVTFMPTIDFTGIILPQFFQGFAVACFFLPLTTISFS
                     GLPDNKFANASSMSNFFRTLSGSVGTSLTMTLWGRRESLHHSQLTATIDQFNPVFNLS
                     SQIMDKYYGSLSGVLNEINNEITQQSLSISANEIFRMAAIAFILLTVLVWFAKPPFTA
                     KGVG"
     gene            complement(2885..4048)
                     /gene="emrK"
                     /locus_tag="JNZ57_000756"
     CDS             complement(2885..4048)
                     /gene="emrK"
                     /locus_tag="JNZ57_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter periplasmic
                     adaptor subunit EmrK"
                     /protein_id="HAY8827075.1"
                     /translation="MEQINSNKKHSNRRKYFSLLVVVLFIAFSGAYAYWSMELEDMIS
                     TDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLA
                     NIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTL
                     ISSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGY
                     IAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENV
                     VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSM
                     TATIDTKNEDIAEMPELASTVTSMPAYTSKALVIDTSPIEKEISNIISHNGQL"
     gene            4464..5078
                     /gene="evgA"
                     /locus_tag="JNZ57_000757"
     CDS             4464..5078
                     /gene="evgA"
                     /locus_tag="JNZ57_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-sensing system DNA-binding response
                     regulator EvgA"
                     /protein_id="HAY8827076.1"
                     /translation="MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETL
                     KPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSK
                     KEGMNNIIAAIEAAKNGYCYFPFSLNRFVGSLTSDQQKLDSLSKQEISVMRYILDGKD
                     NNDIAEKMFISNKTVSTYKSRLMEKLECKSLMDLYTFAQRNKIG"
     gene            5083..8676
                     /gene="evgS"
                     /locus_tag="JNZ57_000758"
     CDS             5083..8676
                     /gene="evgS"
                     /locus_tag="JNZ57_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-sensing system histidine kinase EvgS"
                     /protein_id="HAY8827077.1"
                     /translation="MKFLPYFFLLCCGLWSTISFADEDYIEYRGISSNNRVTLDPVRL
                     SNKELRWLASKKNLVIAVHKSQTATLLHTDSQQRVRGINADYLNLLKRALNIKLTLRE
                     YADHQKAMDALEEGEVDIVLSHLVASPPLNDDIAATKPLIITFPALVTTLHDSMRPLT
                     SSKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALASVSAGQNDYFIGSNIITSS
                     MISRYFTHSLNVVKYYNSPRQYNFFLTRKESVVLNEVLNRFVDALTNEVRYEVSQNWL
                     DTGNLAFLNKPLELTEHEKQWIKQHPDLKVLENPYSPPYSMTDENGSVRGVMGDILNI
                     ITLQTGLNFSPITVSHNIHAGTQLNPGGWDIIPGAIYSEDRENNVSFAEAFITTPYVF
                     VMQKAPDSEQTLKKGMKVAIPYYYELHSQLKEMYPEVEWIKVDNASAAFHKVKEGELD
                     ALVATQLNSRYMIDHYYPNELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPP
                     SEVLRLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKV
                     IQGDLENQISFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYYKNAILPLENS
                     DSPFKDVFSNAHEVTAETKENRTIYTQVFEIDNGIEKRCINHWHTLCNLPASDHAVYI
                     CGWQDITETRDLIHALEVERNKAINATVAKSQFLATMSHEIRTPISSIMGFLELLSGS
                     GLSKEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQLQLQWVDIPTLVQNTCHS
                     FGAIAASKSIALSCSSTFPDHYLVKIDPQAFKQVLSNLLSNALKFTSEGAVKITTSLV
                     HIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQQTGSGLGLMICKELIKNM
                     QGDLSLESHPGIGTTFTITIPVEISQQVATVEAKAEHPITLPEKLSILIADDHPTNRL
                     LLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLREQNSS
                     LPIWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQVAHIAPQYRHLDI
                     EALKNNTANDLQLMQEILITFQHETHKDLPAAFQALEAGDNRTFHQCIHRIHGAANIL
                     NLQKLINISHQLEITPVSDDSKPEILQLLNSVKEHIAELDQEIAVFCQKND"
     gene            complement(8732..9877)
                     /gene="yfdE"
                     /locus_tag="JNZ57_000759"
     CDS             complement(8732..9877)
                     /gene="yfdE"
                     /locus_tag="JNZ57_000759"
                     /EC_number="2.8.3.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416872.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA:oxalate CoA-transferase"
                     /protein_id="HAY8827078.1"
                     /translation="MTNNESKGPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPP
                     GHGDDTRTFGPYVDGQSLYYSFINHGKESVVLDLKNDYDKSIFINMLKQADVLAENFR
                     PGTMEKLGFSWETLQEINPSLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYP
                     DAPPVRVGTSLADLCGGVYLFSGIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMA
                     YIATGKSPQRLGNRHPYMAPFDVFNTQDKPITICCGNDKLFSALCQALELTELVNDPR
                     FSSNILRVQNQAILKQYIERTLKTQAAEVWLARIHEVGVPVAPLLSVAEAIKLPQTQA
                     RNMLIEAGGIMMPGNPIKISGCADPHVMPGAATLDQHGEQIRQEFSS"
     gene            complement(9951..10895)
                     /gene="yfdV"
                     /locus_tag="JNZ57_000760"
     CDS             complement(9951..10895)
                     /gene="yfdV"
                     /locus_tag="JNZ57_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter YfdV"
                     /protein_id="HAY8827079.1"
                     /translation="MLTFFIGDLLPIIVIMLLGYFSGRRETFSEDQARAFNKLVLNYA
                     LPAALFVSITRANREMIFADTRLTLVSLVVIVGCFFFSWFGCYKFFKRTHAEAAVCAL
                     IAGSPTIGFLGFAVLDPIYGDSVSTGLVVAIISIIVNAITIPIGLYLLNPSSGADGKK
                     NSNLSALISAAKEPVVWAPVLATILVLVGVKIPAAWDPTFNLIAKANSGVAVFAAGLT
                     LAAHKFEFSAEIAYNTFLKLILMPLALLLVGMACHLNSEHLQMMVLAGALPPAFSGII
                     IASRFNVYTRTGTASLAVSVLGFVVTAPLWIYVSRLVS"
     gene            complement(10965..12659)
                     /gene="oxc"
                     /locus_tag="JNZ57_000761"
     CDS             complement(10965..12659)
                     /gene="oxc"
                     /locus_tag="JNZ57_000761"
                     /EC_number="4.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxalyl-CoA decarboxylase"
                     /protein_id="HAY8827080.1"
                     /translation="MSDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAE
                     GIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMI
                     SGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPG
                     GVYLDLPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIIL
                     GKGAAYSQADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVML
                     VGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAVPVIGDIASSMQGMLAELK
                     QNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSAVRDVLRENQDIYLV
                     NEGANTLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIEGDSAF
                     GFSGMEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAGAPSPTDLLHHARYDKLMDA
                     FRGVGYNVTTKDELRHALTTGIQSRKPTIINVVIDPAAGTESGHITKLNPKQVAGN"
     gene            complement(12713..13963)
                     /gene="frc"
                     /locus_tag="JNZ57_000762"
     CDS             complement(12713..13963)
                     /gene="frc"
                     /locus_tag="JNZ57_000762"
                     /EC_number="2.8.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyl-CoA transferase"
                     /protein_id="HAY8827081.1"
                     /translation="MSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDV
                     TRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKEVMEKLIREADILVENFHPGAI
                     DHMGFTWEHIQEINPRLIFGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGPP
                     LVSAAALGDSNTGMHLLIGLLAALLHREKTGRGQRVTMSMQDAVLNLCRVKLRDQQRL
                     DKLGYLEEYPQYPNGTFGDAVPRGGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQN
                     WENTCKAIGKPEWITDPAYSTAHARQPHIFDIFAEIEKYTVTIDKHEAVAYLTQFDIP
                     CAPVLSMKEISLDPSLRQSGSVVEVEQPLRGKYLTVGCPMKFSAFTPDIKAAPLLGEH
                     TAVVLQELGYSDDEIAAMKQNHAI"
     gene            complement(14476..15108)
                     /locus_tag="JNZ57_000763"
     CDS             complement(14476..15108)
                     /locus_tag="JNZ57_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdX family protein"
                     /protein_id="HAY8827082.1"
                     /translation="MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAA
                     AERISEQGLYAMRDVQVARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKT
                     NLNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVME
                     NQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN"
     gene            15404..15679
                     /gene="ypdI"
                     /locus_tag="JNZ57_000764"
     CDS             15404..15679
                     /gene="ypdI"
                     /locus_tag="JNZ57_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis lipoprotein YpdI"
                     /protein_id="HAY8827083.1"
                     /translation="MKVNLILFSLFLLVSIMACNVFAFSISGGVSERSYKETEKTSAM
                     TTTHSTKLQPSQAILFKMREDAPPLNLTEEITPTYPTKANYLIHPVR"
     gene            complement(15756..15998)
                     /locus_tag="JNZ57_000765"
     CDS             complement(15756..15998)
                     /locus_tag="JNZ57_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdY family protein"
                     /protein_id="HAY8827084.1"
                     /translation="MIYLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYY
                     FTMWLTGGNELVTGIFMFLAPACGLMIRFMVGYGRR"
     gene            16351..17271
                     /gene="lpxP"
                     /locus_tag="JNZ57_000766"
     CDS             16351..17271
                     /gene="lpxP"
                     /locus_tag="JNZ57_000766"
                     /EC_number="2.3.1.242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311285.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kdo(2)-lipid IV(A) palmitoleoyltransferase"
                     /protein_id="HAY8827085.1"
                     /translation="MFPQCKFSREFLHPRYWLTWFGLGVLWLWVQLPYPVLCFLGTRI
                     GAMARPFLKRRESIARKNLELCFPQHSAEEREKMIAENFRSLGMALVETGMAWFWPDS
                     RVRKWFDVEGLDNLKRAQMQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNQL
                     MEWVQTRGRMRSNKAMIGRNNLRGIVGALKKGEAVWFAPDQDYGRKGSSFAPFFAVEN
                     VATTNGTYVLSRLSGAAMLTVTMVRKADYSGYRLFITPEMEGYPTDENQAAAYMNKII
                     EKEIMRAPEQYLWIHCRFKTRPVGESSLYI"
     gene            17627..17698
                     /gene="ypdK"
                     /locus_tag="JNZ57_000767"
     CDS             17627..17698
                     /gene="ypdK"
                     /locus_tag="JNZ57_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_077777854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein YpdK"
                     /protein_id="HAY8827086.1"
                     /translation="MKYFFMGISFMVIVWAGTFALMI"
     gene            complement(17763..19001)
                     /gene="alaC"
                     /locus_tag="JNZ57_000768"
     CDS             complement(17763..19001)
                     /gene="alaC"
                     /locus_tag="JNZ57_000768"
                     /EC_number="2.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine transaminase"
                     /protein_id="HAY8827087.1"
                     /translation="MADTRPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMG
                     NPDGATPPHIVEKLCTVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVEIDPESEAI
                     VTIGSKEGLAHLMLATLDHGDMVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNE
                     LERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVY
                     DGWKAPSIMQVPGARDVAVEFFTLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYG
                     TFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWIVEMPKASMYVWAKI
                     PEPYAAMGSLVFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKA
                     MFRADGLLPASSKHIHENAE"
     gene            19377..21074
                     /locus_tag="JNZ57_000769"
     CDS             19377..21074
                     /locus_tag="JNZ57_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HAY8827088.1"
                     /translation="MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKE
                     LLAVTAIFSLFALFSTWSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRY
                     LIDIGGVTAIPCFITSILAGCISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWA
                     PTTALGIDIVSKIGIPMILGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLP
                     LFRHVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQ
                     AMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAV
                     GLSQIISTQLEVSRAEQLREMANKAELRTLQSKINPHFLFNALNAISSSIRLNPDTAR
                     QLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNC
                     CIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV
                     EANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEPGTEIAFYIPNQRTPVASQATLLL"
     gene            21089..21823
                     /locus_tag="JNZ57_000770"
     CDS             21089..21823
                     /locus_tag="JNZ57_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HAY8827089.1"
                     /translation="MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQH
                     NRVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKP
                     YQESRITGMLQKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEA
                     HEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYI
                     LRLKDLDFEVPVSRSKVKEFRQLMHL"
     gene            21836..22693
                     /locus_tag="JNZ57_000771"
     CDS             21836..22693
                     /locus_tag="JNZ57_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY8827090.1"
                     /translation="MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSL
                     CIDFPRLDIVLRGEYGNLLEAKQQRMVEGEMLFIPARAANLPINNKPVMLLSLVFAPT
                     WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSL
                     LHLCRNVVNMPPGNSQPRGDFLYHSICNWVQDNYTQPLTRESVAQFFNITPNHLSKLF
                     AQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP
                     GEYSARFQG"
     gene            complement(22696..25190)
                     /gene="ptsP"
                     /locus_tag="JNZ57_000772"
                     /pseudo
     CDS             complement(22696..25190)
                     /gene="ptsP"
                     /locus_tag="JNZ57_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416884.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
     gene            complement(25215..26259)
                     /gene="ypdE"
                     /locus_tag="JNZ57_000773"
                     /pseudo
     CDS             complement(25215..26259)
                     /gene="ypdE"
                     /locus_tag="JNZ57_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311291.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
     gene            complement(26259..27344)
                     /gene="ypdF"
                     /locus_tag="JNZ57_000774"
     CDS             complement(26259..27344)
                     /gene="ypdF"
                     /locus_tag="JNZ57_000774"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HAY8827091.1"
                     /translation="MTLLASLRDWLKAQQLDAVLLSSRQNKQPHLGISTGSGYVVISR
                     ESAHILVDSRYFVEVEARAQGYQLHLLDATNTLTTIVNQIIADEQLQTLGFEGQQVSW
                     ETAHRWKSELNAKLVSATPDVLRQIKTPEEVEIIRLACGIADRGAEHIRRFIQAGMSE
                     REIAAELEWFMRQQGAEKASFDTIVASGWRGVLPHGKASDKIVAAGEFVTLDFGALYQ
                     GYCSDMTRTLLVNGEGVSAESHPLFDVYQIVLQAQLAAISAIRPGVRCQQIDDAARRV
                     ITEAGFGDYFGHNTGHAIGIEVHEDPRFSPRGTKTLQPGMLLTVEPGIYLPGQGGVRI
                     EDVVLVTPQGAEVLYAMPKTVLLTGEA"
     gene            complement(27359..28606)
                     /locus_tag="JNZ57_000775"
     CDS             complement(27359..28606)
                     /locus_tag="JNZ57_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-like permease IIC component"
                     /protein_id="HAY8827092.1"
                     /translation="MAIKKRSATVVPGASGAAAAVKNPQASKSSFWGELPQHVMSGIS
                     RMVPTLIMGGVILAFSQLIAYSWLKIPAEIGIMDALNSGKFSGFDLSLLKFAWLSQSF
                     GGVLFGFAIPMFAAFVANSIGGKLAFPAGFIGGLMSTQPTQLLNFDPSTMQWATSSPV
                     PSTFIGALIISIVAGYLVKWMNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITP
                     FGGWINGGIRTVLTAAGEKGALMYAMGIAAATAIDLGGPINKAAGFVAFSFTTDHVLP
                     VTARSIAIVIPPIGLGLATIIDRRLTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFA
                     LESPITAIPSYMVGAIVGSTAAVWLGAVQWFPESAIWAWPLVTNLGVYMAGIALGAVI
                     TALMVVFLRLMMFRKGKLLIDSL"
     gene            complement(28628..28954)
                     /locus_tag="JNZ57_000776"
     CDS             complement(28628..28954)
                     /locus_tag="JNZ57_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-like phosphotransferase enzyme IIB
                     component 1"
                     /protein_id="HAY8827093.1"
                     /translation="MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGAD
                     GIQNRLTAQDIAEATIIIHSVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEIEEM
                     IASEQQ"
     gene            complement(29173..30138)
                     /gene="glk"
                     /locus_tag="JNZ57_000777"
     CDS             complement(29173..30138)
                     /gene="glk"
                     /locus_tag="JNZ57_000777"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HAY8827094.1"
                     /translation="MIKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAV
                     IRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFT
                     AVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGH
                     VDFAPNSEEEAIILEILRAEIGHVSAERVLSGPGLVNLYRAIVKADNRLPENLKPKDI
                     TERALADSCTDCRRALSLFCVIMGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASG
                     FRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQTLGHIL"
     gene            30342..31598
                     /locus_tag="JNZ57_000778"
     CDS             30342..31598
                     /locus_tag="JNZ57_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ion channel protein"
                     /protein_id="HAY8827095.1"
                     /translation="MLHPRARTMLLLSLPAVAIGIASSLILIVVMKIASVLQNLLWQR
                     LPGTLGIAQDSPLWIIGVLTLTGIAVGLVIRFSQGHAGPDPACEPLIGAPVPPSALPG
                     LIVALILGLAGGVSLGPEHPIMTVNIALAVAIGARLLPRVNRMEWTILASAGTIGALF
                     GTPVAAALIFSQTLNGSSEVPLWDRLFAPLMAAAAGALTTGLFFHPHFSLPIAHYGQM
                     EMTDILSGAIVAAIAIAAGMVAVWCLPRLHAMMNQMKNPVLVLGIGGFILGILGVIGG
                     PVSLFKGLDEMQQMVANQAFSTSDYFLLAVIKLAALVVAAASGFRGGRIFPAVFVGVA
                     LGLVLHEHVPAVPAAITVSCAILGIVLVVTRDGWLSLFMAAVVVPNTTLLPLLCIVML
                     PAWLLLAGKPMMMVNRPKQQPPHDNV"
     gene            31713..32039
                     /locus_tag="JNZ57_000779"
     CDS             31713..32039
                     /locus_tag="JNZ57_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2502 domain-containing protein"
                     /protein_id="HAY8827096.1"
                     /translation="MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYW
                     DGGHWRDRDYWHRNYEWRKNRWWRHDNGYHRGWDKRKAYERGYREGWRDRDDHRGKGR
                     GHGHRH"
     gene            complement(32180..33418)
                     /gene="mntH"
                     /locus_tag="JNZ57_000780"
     CDS             complement(32180..33418)
                     /gene="mntH"
                     /locus_tag="JNZ57_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mn(2+) uptake NRAMP transporter MntH"
                     /protein_id="HAY8827097.1"
                     /translation="MTNYRVESSSGRAARKMRLALMGPAFIAAIGYIDPGNFATNIQA
                     GASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAE
                     IIAMATDLAEFIGAAIGFKLILGVSLLQGAVLTGIATFLILMLQRRGQKPLEKVIGGL
                     LLFVAAAYIVELIFSQPNLAQLGKGMVIPSLPTSEAVFLAAGVLGATIMPHVIYLHSS
                     LTQHLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAY
                     LTLQPLLSHAAATVFGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVTMLP
                     SFIVILMGLDPTRILVMSQVLLSFGIALALVPLLIFTSDSKLMGDLVNSKRVKQTGWV
                     IVVLVVALNIWLLVGTALGL"
     gene            33754..34956
                     /gene="nupC"
                     /locus_tag="JNZ57_000781"
     CDS             33754..34956
                     /gene="nupC"
                     /locus_tag="JNZ57_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease NupC"
                     /protein_id="HAY8827098.1"
                     /translation="MDRVLHFVLALAVVAILALLVSSDRKKIRIRYVIQLLVIEVLLA
                     WFFLNSDVGLGFVKGFSEMFEKLLGFANEGTNFVFGSMNDQGLAFFFLKVLCPIVFIS
                     ALIGILQHIRVLPVIIRAIGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGK
                     ISRNRMYTMAATAMSTVSMSIVGAYMTMLEPKYVVAALVLNMFSTFIVLSLINPYRVD
                     ASEENIQMSNLHEGQSFFEMLGEYILAGFKVAIIVAAMLIGFIALIAALNALFATVTG
                     WFGYSISFQGILGYIFYPIAWVMGVPSSEALQVGSIMATKLVSNEFVAMMDLQKIAST
                     LSPRAEGIISVFLVSFANFSSIGIIAGAVKGLNEEQGNVVSRFGLKLVYGSTLVSVLS
                     ASIAALVL"
BASE COUNT         9231 a         8685 c         8068 g         9004 t
ORIGIN      
        1 ggcacgacct cattggctga aggtttacct tatgttggcc tgaacgaaca ggatgttcag
       61 gacgcccatg cgcgcttatc ccgttttgca ccctatctgg caaaagcatt tgctgaaact
      121 gctgccactg gggggattat tgaatcagaa ctggttgcca ttccagctat gcaaaaacgg
      181 ctggaaaaag aatatcagca accgatcagc gggcaactgt tactgaaaaa agatagccat
      241 ttgcccattt ccagctccat aaaagcacgc ggcgggattt atgaagtcct ggcacacgca
      301 gaaaaactgg ctctggaagc ggggttgctg acgcttgatg atgactacag caaactgctt
      361 tctccggagt ttaaacagtt ctttagccaa tacagcattg ctgtgggctc aaccggaaat
      421 ctggggttat caatcggcat tatgagcgcc cgcattggct ttaaggtgac agttcatatg
      481 tctgctgatg cctgggcatg gaaaaaagcg aaactgcgca gccatggcgt tacggtcgtg
      541 gaatatgagc aagattatgg tgttgccgtc gaggaaggac gtaaagcagc gcagtctgac
      601 ccgaactgtt tctttattga tgacgaaaat tcccgcacgt tgttccttgg gtattccgtc
      661 gctggccagc gtcttaaagc gcaatttgcc cagcaaggcc gtatcgtcga tgctgataac
      721 cctctgtttg tctatctgcc gtgtggtgtt ggcggtggtc ctggtggcgt cgcattcggg
      781 cttaaactgg cgtttggcga tcatgttcac tgcttttttg ccgaaccaac gcactcccct
      841 tgtatgttgt taggcgtcca tacaggatta cacgatcaga tttctgttca ggatattggt
      901 atcgacaacc ttaccgcagc ggatggcctt gcagttggtc gcgcatcagg ctttgtcggg
      961 cgggcaatgg tgcgtctgct ggatggcttc tataccctta gcgatcaaac catgtatgac
     1021 atgcttggct ggctggcgca ggaagaaggt attcgtcttg aaccttcggc actggcgggt
     1081 atggccggac ctcagcgcgt gtgtgcatca gtaagttacc aacagatgca cggtttcagc
     1141 gcagaacaac tgcgtaatac cactcatctg gtgtgggcga cgggaggtgg aatggtgccg
     1201 gaagaagaga tgaatcaata tctggcaaaa ggccgttaat aacgtttcaa cgcagcatcg
     1261 caatcctttc cctgggtgag cgatgctgcc gatggcgcag acttaagatc cccggtctta
     1321 cccgctataa ccccctcctt ttatcatcac ccaacgcctt tcgctgtaaa cggcggtttc
     1381 gcaaaccaaa ccaaaaccgt aagtaagata aaagcaatag ccgccatacg gaaaatctca
     1441 tttgcagaaa tagaaagtga ctgctgggtt atttcattat taatttcatt aagaactcct
     1501 gaaagcgaac cataatattt atccataatt tgtgacgata aattaaacac ggggttaaat
     1561 tgatcgatgg ttgctgtcaa ctgactatgg tgtaacgatt cgcgtcgtcc ccacagcgtc
     1621 attgtcaacg acgtaccaac tgatcctgac aaggtacgaa aaaaattact catactcgag
     1681 gcattggcaa atttattatc tggcaagcct gaaaacgaaa tcgttgttaa gggtaaaaag
     1741 aaacaggcaa cggcgaatcc ctgaaaaaac tgcggcaaaa tgatgcctgt aaaatcaatc
     1801 gttggcataa atgtcacaga acgccagtaa tagcaaaccg catacatcaa aaaactaaat
     1861 gtcactaaca accgcatgtc tattttgttg ccataacgtc ctatcaaagg tgaaattaat
     1921 agtggcatga tgccgatggg cgcataagca agtccggccc atatcgcatt ataccccatc
     1981 gtttcctgga gtaactgcgg cataaggacg atcgctccag agtaaaataa atacgcgcat
     2041 gtgatactca caataccaat ggtgaagtta cgggacttaa acaaactgag atcaagaatc
     2101 gggttctctg aggtcgactc ccaaatgact aaagagatca gagaaataac tgatactact
     2161 gttaatatta ttattgtact cgagttgaac caatccagat cgcgcccttt atcaagcata
     2221 atttgcaagc caccaacacc gagcactaac agggtcagtc ctggtagatt cattttgacc
     2281 ggtgaagtct cagtttctct tcctttaagt aaggttaagc ataatgtcag gacgataatc
     2341 cccataggga cattgattaa aaatatccaa ccccagttaa agttatcaca aatataaccg
     2401 cccaatatcg gcccacatat cggagcgata atcacggtca ttgaccataa tgccagagca
     2461 aatgttcttt tttctggcgg ataattcctt aataataaac tctgtgacag tggaattaac
     2521 ggccccgcca ttaacccctg aacgactcta aaaaatatca gcacatcaag attggtcgat
     2581 aggctacaca ttaatgaaga cagcgaaaaa aaggttactg aaagtaaaaa taatcttaat
     2641 tcgcctattc tttgtgccaa cctgccagta acagggatcg caatggcatt tgctacacca
     2701 aacgaggtga taacccaggt gccttcgtct gttgatgctc ccagaaagcc agatattgtc
     2761 ggtattgcga cgttagaaat agtggaatcc aacatttgca taaatgtcgc taatgacaat
     2821 gcaatagtga cgcaccataa cgtcccaccg gttaatggtg ccggagttga tttagtgatt
     2881 gccattaaag ttgtccatta tgcgaaataa tgttgctaat ttctttttct atcggactgg
     2941 tatcgataac taaagcctta ctggtataag ccggcatgga ggtcacggtt gaagccagct
     3001 caggcatctc ggcaatgtct tcgttcttcg tatcaatagt tgctgtcatc gataaaccaa
     3061 tacgcaaggg atgttccatg agttcttttg gatcaagaga aacttcaacc ggtacacgct
     3121 gaacgatttt gatccagttc cctgtcgcat tttgtgcagg taataaggag aacgcattgc
     3181 cggttcccat attgatccct gtcacccgac catgaaacac aacattttca ccataaagat
     3241 cgctgataat attgaccgat tgaccaatcc gcacatccgt gagttgtgtt tctttaaagt
     3301 tggcattaac ccacatttga cgtgccggta cgacagccat taacgattgt ccggggctca
     3361 ctgtttcgcc gacctgaaca cttctctggg caatatagcc ggtaaccgga ctcttaatat
     3421 ccgtacgttt aagcgccaac caggcttctt tagttgcatc cgccgcttca acgacttgtg
     3481 gctgacggtt taatggtgtg ttcattacta aagctttatt cgctttataa gcctggatag
     3541 cggcattcaa tgccgctttg ctacttatta acgtatcttt ggtatgctcc agcgtttctt
     3601 ttgaaataac cccctgcttc gctaacggca ctcgacggtt ataatcttct aaagattgtt
     3661 gatactgaat acgtgctgaa gcgacttcgg cactgtattg tttatcctgt aagtatagtt
     3721 tattcgtttg ccgaacaata tttgccagat tatttttagc tttattgagt gcgatagtgg
     3781 catcagtttt atccagtgaa actaaaatgt caccttgtcg aacgtagttc gtatctttat
     3841 gattaacgac agtgacacta cctgagactt gtgcagaaat tggatctgca ttccccgtga
     3901 cataggcgtc atctgtacta atcatgtctt ctaattccat tgaccaatag gcataggcac
     3961 ctgaaaacgc aataaataaa actaccacca ataaagaaaa gtattttctt ctgttagaat
     4021 gttttttatt tgaattaatc tgttccacta ttatctctca tttctcatag atgaaattta
     4081 tgaattgaat gaaaagagca ttcattcttc atatcaaaca cagtgcatgt gttgcacatt
     4141 atcccaggaa cgttggaggc ctaatttaaa tgaggtgcaa aaaaaacaac agaggactaa
     4201 accgtggctt ttgcaataca attcttacgc ctgtaggatt agtaagaaga cttatagtgc
     4261 taacttgaaa ctataaatca tcggtacaac ccctgatttt attgttgaca tttcatttat
     4321 gccgactatt tatatggtat acttgtcgaa ttatcttaaa ggaagctcag attttcttat
     4381 ttttattgag aaaatgagat gacgccttat gtctgtatta ctacagggag aagggagatg
     4441 cttcattgca aagggaataa tctatgaacg caataattat tgatgaccat cctcttgcta
     4501 tcgcagcaat tcgtaattta ttgatcaaaa acgatattga aatcttagcg gagttgactg
     4561 aagggggaag cgccgttcag cgggtggaaa cacttaagcc tgatatcgtc atcattgatg
     4621 tcgatatccc cggagttaac ggtatccagg tgttagaaac gctgaggaag cgccaatata
     4681 gcggaattat tattattgtc tccgctaaaa atgaccattt ttacgggaaa cattgtgctg
     4741 atgctggcgc taatggattc gtgagtaaaa aagaaggcat gaacaatatc attgcggcta
     4801 ttgaagctgc aaaaaatggc tactgctatt tccccttctc tctcaaccgg tttgttggaa
     4861 gtttaacgtc cgaccagcaa aaactcgact ccttatcgaa acaagaaatt agtgtcatgc
     4921 ggtatattct tgatggcaag gataataatg acattgctga aaaaatgttc atcagcaaca
     4981 aaactgtcag cacttataaa agtcgcctga tggaaaaatt agaatgtaaa tcactgatgg
     5041 atctttacac attcgcgcaa cgtaacaaaa tcggctaatc acatgaagtt tttaccctat
     5101 ttttttcttc tctgttgtgg tctttggtcg accataagtt tcgcagacga agattacatc
     5161 gaatatcgtg gcatcagtag taacaaccgt gtcacacttg atccagtacg tctgagcaac
     5221 aaggaattac gttggttagc gagcaaaaaa aatcttgtga ttgcagtaca caagtcccaa
     5281 acggctacct tgttgcatac cgattcgcag caacgggttc gtggtattaa tgctgattat
     5341 ttaaatcttt taaaaagagc gttaaatatc aaattaacac tccgggaata cgccgatcat
     5401 caaaaagcaa tggacgcgct ggaagaaggt gaagtcgata tagtgttatc acatttagtt
     5461 gcttcgccgc ctcttaatga tgacattgct gcaaccaaac cactgataat tacctttccg
     5521 gcgctcgtca ccacccttca cgattcaatg cgaccgctta cctcatcaaa accagtaaat
     5581 attgctcgag tagcaaatta tccccctgac gaggtaattc atcaatcatt tccaaaagca
     5641 acaattatct cttttacaaa tttatatcag gcattagcat ccgtctcagc cggacagaat
     5701 gattacttta ttggtagtaa catcattacc agcagtatga tttcccgcta tttcactcac
     5761 tccttaaatg tagtgaaata ttataactca ccgcgtcaat ataatttttt cttgaccaga
     5821 aaagaatctg tcgttcttaa tgaagtactc aatcgatttg ttgatgcttt aacaaatgaa
     5881 gttcgctatg aagtttcaca aaattggctt gatacaggaa acctggcctt tctgaacaaa
     5941 ccattagaac tcactgaaca tgaaaaacag tggattaagc aacatcccga tttaaaggtg
     6001 ctggaaaatc cttactctcc tccctattct atgacggatg aaaatggctc ggttcggggc
     6061 gttatggggg atattcttaa tattattacc ttgcaaacag gtttaaattt ttctccgatc
     6121 accgtttcac acaatatcca tgccggaaca cagcttaacc ccggtggatg ggatataata
     6181 cctggcgcta tttatagtga agatcgagaa aataatgttt catttgcaga agctttcata
     6241 acaacgccat acgtttttgt catgcaaaaa gcacctgaca gtgaacaaac attaaaaaaa
     6301 ggaatgaaag ttgccattcc atattattat gagctgcatt cgcaattaaa agagatgtat
     6361 ccggaggttg agtggataaa agtcgataac gccagcgctg catttcacaa ggtcaaggaa
     6421 ggtgaacttg atgctctggt cgcgacacag ctaaattcgc gttacatgat cgatcattac
     6481 tatcctaatg aactgtatca ttttcttatt cccggcgttc cgaatgcatc gctttcgttc
     6541 gcttttcctc gcggagaacc ggaacttaag gatattatta ataaagcact gaatgcaatt
     6601 cccccaagcg aagttctgcg cctgacggaa aaatggatta aaatgcccaa tgtgaccatt
     6661 gacacatggg acctctatag cgagcaattt tatattgtta cgacattatc cgttttatta
     6721 gttggcagta gccttttatg gggattctac ctgttacgct cagttcgtcg tcgtaaagtc
     6781 attcagggtg atttagaaaa ccaaatatca ttccgaaaag cactctcgga ttccttacca
     6841 aatccaactt atgttgtaaa ctggcaaggt aatgtcatta gtcataatag tgcttttgaa
     6901 cattatttca ctgcggatta ctacaaaaat gcaatattac cattagaaaa cagtgactca
     6961 ccctttaaag atgttttttc taatgcgcat gaagtcacag cagaaacgaa agaaaatcga
     7021 acaatataca cacaggtatt tgaaattgat aatggcatcg agaaaagatg cattaatcac
     7081 tggcatacat tatgcaatct gccagccagc gatcatgctg tttatatttg tggttggcaa
     7141 gatattaccg agacgcgtga tttaattcat gcactcgaag tagagagaaa taaagcgatc
     7201 aatgcaactg tcgcaaaaag tcagtttctg gcaacaatga gtcacgaaat aagaacacca
     7261 ataagctcca ttatgggctt cctggaactt ctgtcgggtt ctggtcttag caaggagcaa
     7321 cgggtggagg cgatttcact tgcctacgcc accggacaat cactcctcgg cttaattggt
     7381 gaaatccttg atgtcgacaa aattgaatcg ggtaactatc aacttcaact acaatgggtc
     7441 gatatcccta ctttagtcca gaacacttgt cactctttcg gtgcgattgc tgcaagcaaa
     7501 tcgatcgcat taagttgcag cagtacattt cctgatcatt acctggttaa gatcgaccct
     7561 caggcgttta agcaggtctt atcaaattta ctgagcaatg ctctcaaatt tacctccgag
     7621 ggggcagtaa aaattacgac ctccctggtt cacattgatg acaaccacgc tgttatcaaa
     7681 atgacgatta tggattctgg aagtggatta tcgcaggaag aacaacaaca actctttaaa
     7741 cgctacagcc aaacaagtgc aggtcgccag caaacaggat ctggcttagg cttaatgatc
     7801 tgcaaagaat taattaaaaa tatgcagggc gatttgtcat tagaaagtca tccaggcata
     7861 ggaacaacat ttacgatcac aatcccggta gaaattagcc agcaagtggc gactgtcgag
     7921 gcaaaagcag aacaccccat cacactacct gaaaagttga gcatattaat cgcggatgat
     7981 catccgacca acaggctatt actcaaacgc cagctaaatc tattaggata tgatgttgat
     8041 gaagccactg atggtgtgca agcgctacac aaagtcagta tgcaacatta tgatctgctt
     8101 attactgacg ttaatatgcc gaatatggat ggttttgagt tgactcgcaa actccgtgag
     8161 caaaattctt ccttacccat ctgggggctt acagccaacg cacaggctaa cgaacgtgaa
     8221 aaagggttaa gttgcggcat gaacttatgt ttgttcaaac cgttgaccct ggatgtactg
     8281 aaaacacatt taagtcagtt acaccaggtt gcgcatattg cacctcagta tcgccacctt
     8341 gatatcgaag ccctgaaaaa taatacggcg aacgatctac aactgatgca ggagattctc
     8401 atcactttcc agcatgaaac gcataaagat ctacccgctg cgtttcaagc actagaagct
     8461 ggcgataaca gaactttcca tcagtgtatt catcgcatcc acggtgcggc taacatcctg
     8521 aatttgcaaa agttgattaa tattagccat cagttagaaa taacacctgt ttcagatgac
     8581 agtaagcctg aaattcttca gttgctgaac tctgtaaaag aacacattgc agagctggac
     8641 caggagattg ctgttttctg tcagaaaaat gactaaatag cggctcccac aatgttcaaa
     8701 tgtgggagct atttaccagc acatcttaca tttatgatga gaactcctgg cgaatttgtt
     8761 ccccatgctg gtcgagcgtt gccgctcccg gcataacatg cgggtccgcg cagccgctga
     8821 tttttatcgg attacccggc atcattattc ccccggcttc aatcaacata tttctcgcct
     8881 gagtttgtgg caatttaatg gcctcagcca cacttaataa cggcgcgacg ggtacaccaa
     8941 cttcatgtat tctggctaac caaacttcag ctgcctgcgt ttttaacgtc cgctcaatat
     9001 attgtttaag aatagcctgg ttttgtacgc gtaaaatatt gctgctaaat cggggatcat
     9061 taaccagttc cgtaagctcc agtgcctggc ataacgcaga aaaaagcttg tcattaccac
     9121 aacaaatcgt aatcggctta tcctgagtat tgaaaacatc aaaaggtgcc atgtagggat
     9181 ggcgatttcc cagacgttgt ggtgacttcc ctgtcgcgat atatgccatc agaccatgct
     9241 ccagaaaact cagcgtggca tcaaacatcg ctatatcgac atgcgcccct ctctggctct
     9301 tttcgcggcc ataaagtgca ctcactattc cgctgaataa atagacaccg ccgcatagat
     9361 ccgcaagaga tgtaccaacg cgcactggcg gagcatcagg atatcctgtt tccatcatta
     9421 tcccgctcat tgcctgaatg atggtatcgt aggcaggagc atcttttagc ggaccggtat
     9481 gtccgaaacc tgacgatgaa gcatatatga ggctcgggtt gatttcttga agcgtttccc
     9541 atgaaaaccc cagtttttcc attgtacctg ggcgaaaatt ctcagctaat acatcagctt
     9601 gtttgagcat atttataaat atacttttat cgtaatcatt ctttaaatca agaaccacac
     9661 tctctttgcc atgattaata aaactgtaat agagtgactg tccatccaca tagggaccaa
     9721 atgtgcgggt atcatcacca tgacccggcg gctcaacttt aattaccctt gcgcccatat
     9781 tacaaagaag ttgagttccg aaaggtccat taaggacatg tgtcatatcg ataactaata
     9841 agccttcaaa cggccctttg ctttcattat ttgtcatttg cttatgcctt gaaaaaagcc
     9901 gaaggtgaaa agacacttcg gcatttatgt aaaatcaata acatgattaa ttatgaaacc
     9961 agtcgactga cataaatcca caagggagcc gtgacgacaa agcccagtac gctcacagcc
    10021 aatgacgctg taccagtacg ggtgtagaca ttaaaccggc tggcaataat aattccggag
    10081 aatgccggcg gtaatgcgcc tgccagtacc atcatctgca gatgttcgct gttcaaatga
    10141 catgccatac caacgagaag cagtgccagt ggcatcagaa tcagcttcag gaaggtgtta
    10201 taagcaattt cggcactgaa ctcgaattta tgtgcagcca gagtcaaccc cgcagcgaat
    10261 accgctaccc ctgagttagc cttcgcaatc agattaaagg ttgggtccca tgctgccgga
    10321 atttttaccc caaccaacac caggatcgtt gccagaacag gtgcccatac tactggctcc
    10381 tttgccgcag aaattaatgc actcagatta ctattcttct taccatccgc tcctgaagaa
    10441 ggattcagca aatacagacc aataggaata gtaattgcgt taacaataat agaaataatt
    10501 gctaccacta aacctgttga tacggaatca ccataaatag gatcgagaac tgcaaaccct
    10561 aggaatccaa tggtaggtga acctgcaatt aatgcacata cagctgcttc tgcatgggta
    10621 cgtttaaaaa atttgtagca accgaaccag gagaaaaaga aacatccgac aataaccaca
    10681 agtgatacaa gggtcagacg agtgtccgca aaaatcattt ccctgtttgc ccgagtaata
    10741 gatacaaata gagccgcagg aagcgcgtag tttaatacca gtttattaaa tgcgcgggct
    10801 tgatcttctg aaaaagtttc tcgtctgccg ctaaaataac ccaacagcat gattacgata
    10861 ataggcaata aatcgccaat aaaaaatgtt agcataatag tatttccgat aagggtcccc
    10921 tcaccatcgc ataatgagtt ggcaagagga gacgatgtca gtatttaatt accagcgact
    10981 tgttttgggt taagtttggt aatatggcca ctttcagttc ctgctgcagg gtcgatgacc
    11041 acattaataa tggtcggttt gcgcgactga ataccggtgg ttaaagcatg acgaagttca
    11101 tctttcgtgg tgacgttata gccaacgcca cgaaacgcat ccattaattt gtcatacctt
    11161 gcatggtgca acagatccgt tggtgatggt gcaccagcgc cactgagatc aacaccgtct
    11221 cctctgtaga tgccgccatt attaaaaata acgatcgtca ccggcaggtt atatcgacaa
    11281 atcgtttcaa tttccatccc actgaaacca aaagcactat caccttcaat ggcgacaacc
    11341 ggagaaccag aagtcacgct agcaccgatg gcatagccca taccgatgcc catgacaccc
    11401 caggtaccac aatccagacg acgacgtggt ttatacatat caataatatt tcgtgcatta
    11461 tccagggtat ttgcaccttc attaactaaa taaatatcct ggttctcgcg caatacgtcg
    11521 cgcacagcac ttaatgcatt aaagtaattt aatggttgag tatctgtact taatttttca
    11581 tgcatttttt gtgcattttg ctgcttgtgg atatttaaaa tatcgcgcca taccagtgga
    11641 gtcgtaaatg tgttttgttt cagttctgcc agcatacctt gcatactgga tgcaatatca
    11701 ccaatgactg gcacagcaat ggggcggttg ctgtcaattt cctgcggttc aatatccagt
    11761 tgaataaact gtgtatctgc cgcccatcct tttttaccgt gtgccaataa ccaattcagt
    11821 cgtgcaccaa caagcatgac aacgtcagca tttgccaggg caaacgaacg cgcagctgcc
    11881 gcagaaagtg gatgcgtatc ttcaaggatc cctttcgcca tagacattgg caggaatgga
    11941 atctgagcac tttcaataaa ttcacgaagc tgttcatcag cttgtgaata cgccgcgcct
    12001 ttgccaagga taattaatgg ccgttcagct tttgctaaaa gcgaaattgc gctagtgact
    12061 gacttcgggc atggcaataa tgctggcgac ggattttcaa ctttaacaat cgtggttaac
    12121 gcttcgtctt tttccatcgt cgcggccagg acatttgctg gcaaatcaag ataaactccg
    12181 ccagggcgac ccgatacaga gacccggata gcgcgtgcca atgcaatgcc aagatcctgc
    12241 ggctgattaa cgcgaaatgc tgctttggca tacggttttg ccgcattcat ttggtccagc
    12301 tcttcataat caccttgctg taggtcgacg atcgcgcggt cgctggagcc gctaatcatg
    12361 atcatcggaa aaccatttac cgttgcgttg gccaatgccg tcaaaccatt gaggaatcct
    12421 ggcgcagaaa ctgtcaggca gatccccggt ttttgggtaa gaaaaccgct tgccgcagcg
    12481 gcatagcctg ccgactgctc atgacgaaaa ccaatataac gaatgccttc cgcctgggca
    12541 tggcgtgcca tatccgtcac aggaatacct acaacaccat aaatagtgtc aatattattc
    12601 tgttttaatg cttcaacgat gatatgcata ccatctgtca tttgaagttg atctgacatg
    12661 attaataacc tcgaaatttt tataaattgg gagccagaag cccccgttaa tatcagatgg
    12721 cgtggttttg cttcattgca gcaatttcat cgtcgctata acctagctcc tgcaatacaa
    12781 cagcggtatg ttcacctaat agcggcgcag ctttaatatc cggcgtaaaa gcagagaatt
    12841 tcattggaca accaacggtc agatattttc cacgcaacgg ttgttccact tcaacaacac
    12901 tgccactttg gcgcaaagag ggatcaagtg aaatttcttt catacttaaa accggtgcac
    12961 aaggaatatc aaactgagtc aaataggcca ccgcttcatg tttatcaata gtgacagtgt
    13021 atttttcgat ttcagcaaaa atatcgaaaa tatgtggctg tcgggcatgg gctgtactgt
    13081 atgccggatc ggtaatccat tctggtttgc cgatggcttt acaggtgttt tcccagtttt
    13141 gctcctgaat agtgaaataa atataggcgt taggatcggt ttcccagcct ttacatttca
    13201 ggatccagcc aggctgaccg ccaccacctg cattaccacc gcggggaact gcatcaccaa
    13261 atgtaccatt cggatactgc gggtattctt ccagataacc caatttatcg agacgctgct
    13321 ggtcacgtaa tttcacgcgg caaaggttca atacggcatc ctgcattgac atggtgactc
    13381 gttgcccacg ccccgttttt tcgcgatgca gcaaagcagc aagtaaaccg atcagcaaat
    13441 gcattccggt gttgctgtca cccaacgctg cagcgcttac cagcggcgga ccatcccaaa
    13501 aacccgtagt ggatgccgcg ccacccgctg cctgagcaac gttttcatag gcttttacat
    13561 tcacataagg cgaacactca tcaaaccctt tgatcgaacc aaaaatcaga cgtggattga
    13621 tttcttgaat atgctcccag gtgaagccca tgtgatcaat ggcccctgga tgaaagttct
    13681 cgactaagat atcagcttcg cggatcagct tttccattac ctctttgcct tccgctgttt
    13741 tggtatttaa ctcaatagaa cgtttgttac tgttaagcat ggtgaagtaa agcgcatcga
    13801 tatcaggaat atctcgcagc tggtgacgcg ttacgtcacc aacgccggga cgttcaattt
    13861 taataacgtc agcgccaaac caggccagca tttgagtaca agatgggcca gattgcacac
    13921 cggtgaaatc gagaacttta attccttgaa gtggagttga catagcaata cctattagtt
    13981 aattaaatat gtgttaattt agcgtttatt taaggcgtaa tatcttctat aaatagcccg
    14041 caaaatatcg tcgtagctgc actcgatatt tttaaaatcc tgtatcaagt gctgaaaatc
    14101 atttcatcgc cacttccaat tcctttctgc atggtaagta gtgaggacga aaagaagaat
    14161 atgataaata ttaattcgtg gtaatcagag agagtcgcga catttgtgat gttattctta
    14221 caactgtaag aagcgccggt gatttacaag taagggtatg attacgcttt ttaaagcgta
    14281 ccataaaaca taacataata aatgatttgt gatgacacgg gattattggg gtttactttg
    14341 aggaagataa aatgcgtgtt tatagaaccg cgagcgccaa ataattttat gaccacaacc
    14401 tgtcgtattg tggtcataaa aaattgtcgg ctggagggag ttaaatcctt tacctcaata
    14461 tactgcctgt cagcattagt tcacaaacag tgcttcgctg tcgacgatga ttccatcttc
    14521 cgcaccttta agcgccaggt ttgcctcgta gtattgcttt ttatcaagca gtttctgcgc
    14581 atcagcaagt gcattacgag tctgtttaag cggcatcaga tattggtttt ccattacgcc
    14641 aacaccggcc aggcgaagtt cttccattgc gcccttttta tcccctttcg ccattttttc
    14701 attggcaatt tttatcgcgg cttctttttc gggagttgct acataactct cagaaattcc
    14761 gacagatgca ttaatgacaa tatattggtc atcattgaga ttggtctttt tacctggctt
    14821 agcgaacttt gcccattcgg tactgtcatc tgacagcaaa gcggaagctt cattggtcag
    14881 ttcttttgcc ttttctggat cgccatgaaa cagagccagg cgcgctacct gcacgtcacg
    14941 catcgcatat aaaccttgtt cagagatacg ctctgctgct gccgttttct gggtttgctg
    15001 aacttgctga gtttgctgtt gtgccgctac cggtgcatta tcagcagccc atacagttga
    15061 agatgccaga attgctgtga ccatcgtagc cataattaaa cgtttcatac ttacctcatt
    15121 ctttaacagt tttagaaaac gccgccatca tattgggtga gcatgaaatg agaaatcaga
    15181 gagcaacggt cattttgaaa gggttatctt acagttgtag ttattatcgc aagaagtatt
    15241 ttagtcttac aattgtagga atctgcttcc tgtcgcagag aactattctt atgtaccaca
    15301 aagagatgtc atttattata tcgatgtaaa tattgattaa ttatatgtaa atacagccat
    15361 aacatcgtag gttctcagtg aaccattttc aggataactt tctatgaaag taaacttaat
    15421 acttttcagc ttatttttat tggtctctat tatggcatgc aatgtttttg cattttccat
    15481 ttctggtggt gtaagtgaga ggagctataa agagactgaa aaaacatcag cgatgacgac
    15541 cacacactct acaaaacttc agccatcaca ggcgattttg tttaagatga gagaagatgc
    15601 gccaccatta aacctcacag aagaaatcac gcctacttat ccgacaaagg cgaattatct
    15661 tattcatcct gtgcgatagc gtctgtcaca tggcaggtga acaatcatgt ctgatgctga
    15721 tgtgaacacc tgcccaaatg agccatcctg acccactatc gcctgccata ccccaccata
    15781 aagcgaatca tcaagccaca agccggggca agaaacataa atatccccgt cactagttca
    15841 ttaccgccag ttaaccacat ggtgaagtaa taaatgagtg cagcgaggat caccatgccg
    15901 aagaaagaag agaccgccga taccacgttc agtacctgac cgatgtagcc gcttacgcag
    15961 acaatacaca gggcgagaaa catccataaa taaatcatag ctcaacctcc tgccgcgcta
    16021 aaaaacctgt aacttcagtc actttaatag taagacaatc cttaacctct ggcaattttt
    16081 gctaagcatc aatgaaaaca gcatgttaaa tgcaagactg ttgtgtacgg aaaaatattt
    16141 actttgcacg attaataatc agtagctgaa agcagtcagc gagtgataaa gtacagatac
    16201 cgcattcatg ctcctcgtgg ttatgtcctg actagtcttt acactcttta caggaaccat
    16261 tgtcgtacat gatggcccaa ccaattgagt gtaccgctgt cgacatggaa tcttctgcga
    16321 tacaacaatt cgtatctaca gaaggtaact atgtttccac aatgcaaatt ttcccgcgag
    16381 tttctacatc ctcgctactg gctcacatgg tttgggcttg gtgtactctg gctttgggta
    16441 cagcttcctt atcctgttct ctgctttctc ggcacgcgta ttggcgcaat ggcgcgacca
    16501 ttcctgaaac gtcgtgaatc tatcgcccgt aaaaacctgg aactttgttt cccgcagcat
    16561 tctgcggaag aacgcgagaa gatgattgcc gaaaactttc gttcactcgg catggcgctg
    16621 gtagaaaccg gcatggcatg gttctggccc gacagtcgcg tacgtaaatg gtttgatgtt
    16681 gaagggttgg ataaccttaa acgcgcacaa atgcaaaatc gcggcgtaat ggttgtcggc
    16741 gtccatttta tgtcgctgga actgggcggc cgcgtgatgg gactgtgcca accaatgatg
    16801 gctacctatc gtccacataa taatcagctg atggaatggg tgcaaacccg tgggcgcatg
    16861 cgctctaaca aagcaatgat cggcagaaat aatctgcgcg gcattgtcgg tgcactgaag
    16921 aaaggtgaag cggtatggtt tgctcccgat caggattatg gtcgtaaagg cagctccttc
    16981 gcgccgttct ttgcggtgga aaatgtcgcc acaaccaatg gcacctatgt tctctcccgt
    17041 ctctctggcg cagccatgtt gaccgtaacg atggtaagaa aagcggatta cagcggatat
    17101 cgtttgttca tcaccccaga gatggaaggc tacccgacag atgaaaatca agccgctgcc
    17161 tatatgaaca agattatcga gaaagagatc atgcgcgcac cggagcagta cctctggatc
    17221 cactgtcgct ttaaaacgcg cccggtggga gaatcgtcgt tgtacattta acaaactgct
    17281 cttactcttt ccctcctcaa atcggccata ataaccccat gatttttatg gcttttttct
    17341 taaggttttt tccttcgctg aatatctaat tattaccgtc agaaattaaa ctgtcgccga
    17401 tatgagacac ttgtaagtta ctaaaagtaa ataagaaaat gcctcttgtc tcgtttcagt
    17461 tttaggcgta cattagcgcc gtctcgagca gtttagctca gaattctggg gtgatgccca
    17521 cggtaaaata cagggctttt aaggtcgctt tgcccggtgt caactcactg tatcaggtgt
    17581 aatgaagtca ttcaggcgta acagcaatta cgcggagaga tgtaaagtga aatatttctt
    17641 tatgggcatt tcttttatgg tcatcgtttg ggccggtact tttgccctga tgatctaaaa
    17701 gcaaactgtg caatgaaaaa caggagccat caggctcctg tttgcatttc tgacgacggt
    17761 gtttattccg cgttttcgtg aatatgtttg ctgctggcgg gtagtaaacc gtcggcacgg
    17821 aacatcgctt taatccctct gatggcctga cgaatacggt cgcggttttc aatcagtgca
    17881 aagcgaacat gcgtatcacc atagtcgcca aagccaatcc ccggcgagac acagaccttc
    17941 gcttcgttaa gcaatttctt ggcaaatacc agcgagccca tggcagcata cggttccggt
    18001 attttcgccc agacatacat cgaagccttc ggcatttcaa ctatccagcc cgcttcatgc
    18061 agccctttaa ccaatacatc acggcggcgt ttgtactgtt cggcaatgtc gcgcacgcac
    18121 tgttgatcgc cctccagcgc cgcaatcgcc gccacctgca acggcgtaaa ggtgccgtaa
    18181 tcgtgatagc ttttaatacg agccagggcg ctgaccagcg ttttgttgcc aaccataaag
    18241 ccgatacgcc agcccgccat gttgtagctt ttcgacagcg taaagaactc gactgccaca
    18301 tcgcgtgcac ccggtacctg catgattgac ggcgctttcc agccatcgta gacgatatcg
    18361 gcataggcca ggtcgtggac caccagcaca tcgtagcgtt tcgccagcgc cacaaccttt
    18421 tcgaagaact ccagctccac gcattgcgcg gttggattcg acgggaagcc gaggatcatc
    18481 atcttcggtt tcggataact ttcacgaatg gcgcgctcca gttcgttgaa gaaatcgaca
    18541 ccttccacca gcggcactga gcgtacctgc gccccggcaa tcaccgcgcc ataaatatgg
    18601 atcgggtaac ttggattcgg caccagcacc atgtcaccat gatccagcgt cgccagcatc
    18661 agatgcgcca ggccctcttt cgaaccaata gtgacgatgg cttctgattc cgggtcgatt
    18721 tcaacgtcgt agcgatcctg ataccagcgg gaaatggcgc gacgtaaccg cggaatgccg
    18781 cgtgaagtgg agtaaccatg cgtgtccggg cgctgggcca cagtacataa tttttcgacg
    18841 atatgcggcg gagtcgcacc gtccgggtta cccatgctga aatcgataat atcttcgccg
    18901 cgccgacgcg cagccatttt cagttcagcg gtgatgttaa aaacgtaggg cgggagacga
    18961 tcaatgcgcg taaagcgacg ttcagggcga gtgtcagcca taatttcctc agattaacgt
    19021 tagcgcccgg accgtccgag cgacgctgcc acaatggtgg ctgttttgaa aatagcctga
    19081 ttaatttctg tctgtccagc gttttagaac atttttatca atggctttaa atgaggaact
    19141 ccacttcaaa aaaaggaaat tttctacgct aacaagaaaa ttaccaccaa ttttattaac
    19201 attataattt caataaattt accagtcaga agtgcattat caagagatac attgctaata
    19261 caccatttat ctttcaatcc ccttttaaat ttatggtttt tcctcaaaaa cggcctgctg
    19321 gtcatcagcc ttcaggttac ctatcataga ggtttaatcc ttattcagag tcacccgtgc
    19381 acgaaatatt caacatgctg ctggcggtct tcgatcgggc agcgttaatg cttatctgcc
    19441 tgttctttct catccgtatc cgcctgtttc gcgagctgtt gcacaagtcg gcacactccc
    19501 caaaagagtt gcttgctgtt accgccattt tctcgctgtt cgccctgttc agcacctggt
    19561 ccggcgttcc cgtagaaggc tcgctggtga acgtacgtat tatcgcggtg atgtccggcg
    19621 ggattctgtt tggcccgtgg gtaggcatca ttaccggcgt gattgcgggt attcaccggt
    19681 atttaattga tatcggcggc gtgacggcga tcccctgctt tatcaccagc attctggcgg
    19741 gttgtatatc aggctggata aacctgaaaa tccccaaagc acagcgctgg cgcgtcggta
    19801 ttctcggcgg catgttgtgt gagacgttga ccatgattct ggtaattgtc tgggcaccaa
    19861 ctaccgcgtt ggggatcgat atcgtctcta aaatcggcat tccaatgatc ctcggtagcg
    19921 tctgtatcgg ctttattgtg cttctggtgc aaagcgttga gggcgaaaaa gaggccagcg
    19981 ccgcgcggca ggccaagctg gcgctggata tcgccaacaa aacgctaccg ctgtttcgcc
    20041 atgtcaatag cgagtcatta cgcaaggtct gcgaaattat ccgcgatgac attcacgccg
    20101 atgcggtggc gattactaat accgatcatg tgctggccta tgttggcgtg ggtgaacata
    20161 actatcagaa tggcgatgac ttcattagcc cgactacccg tcaggcgatg aattacggaa
    20221 aaatcatcat taaaaacaat gatgaagccc accgcacacc agagattcat tccatgctgg
    20281 tgatcccatt gtgggagaaa ggcgttgtga ccggaacgct gaaaatttac tactgccacg
    20341 cgcatcagat aacctcgtca ttacaggaaa tggcggttgg tctgtcgcaa atcatctcca
    20401 cgcaactgga ggtttcacgc gccgagcagc tacgtgaaat ggcaaataag gcagagcttc
    20461 gcaccctgca aagcaaaatt aatccccatt ttctgtttaa cgctctgaac gctatttcat
    20521 cgtcaatccg tctgaatccg gataccgctc gccagttgat ctttaatctg tcgcgttatc
    20581 tgcgctataa cattgaatta aaagacgatg agcaaatcga tatcaaaaaa gagctgtatc
    20641 aaattaaaga ctatattgcc attgagcagg cccgctttgg tgacaagctg acggttatct
    20701 atgatattga tgaagaggtg aattgctgca ttcccagcct gctgatccag ccgttggtgg
    20761 agaacgccat tgtccacggt attcagcctt gcaaaggtaa aggcgttgtc accatcagtg
    20821 ttgcagagtg cggaaatcgg gtacgcattg cggtgcgaga taccgggcac ggcatcgatc
    20881 caaaggtgat tgagcgggtc gaagcgaatg aaatgccggg caataaaatt ggcctgctga
    20941 atgtccatca tcgcgtgaag ttattgtatg gcgaggggct gcatatccgc cgcctggagc
    21001 cggggacgga aattgcgttt tacattccta accaacgcac cccagtcgcc tcacaggcta
    21061 cgttattgct ttgagccgga gtgatattgt gaaagtcatc attgttgaag acgaattcct
    21121 ggcacaacag gaactgagct ggctaattaa agagcacagc cagatggaga ttgtcggcac
    21181 ctttgacgac ggtctggacg tgttgaagtt tttgcagcat aaccgcgtcg acgccatttt
    21241 tctggatatc aatattccgt cgctggatgg cgtgttgctg gcgcaaaaca tcagccagtt
    21301 cgcccataaa ccgtttattg tgttcatcac cgcgtggaaa gaacatgcgg tagaagcgtt
    21361 tgaactggag gcgtttgact acattctcaa accgtatcag gagtcacgta ttaccgggat
    21421 gctgcaaaaa ctggaagcgg cctggcaaca acagcagacc agcagtacgc ctgccgcgac
    21481 ggtaacgcgt gagaatgaca ccattaatct ggtgaaagat gagcgaataa tcgtcacgcc
    21541 aattaacgat atctattacg ccgaagcgca cgagaaaatg acctttgtct atacgcggcg
    21601 tgaatcctac gtaatgccga tgaacattac cgaattttgc agcaaactgc cgccgtcgca
    21661 ttttttccgc tgccatcgct cattttgtgt caatctgaac aaaatacgcg aaatcgaacc
    21721 gtggtttaat aacacctaca ttctgcgact gaaagatctg gattttgaag tgccggtcag
    21781 ccgcagcaaa gtgaaagaat ttcgccagtt aatgcatctt taatcgggaa ctttcatgaa
    21841 agcaccaggc ttgcccgccg atcaacaatt tttcgccgat ctgttcagcg gcctagtgct
    21901 taacccgcaa ctactggggc gcgtctggtt tgccagccag cctgcctcgt taccggtggg
    21961 cagtttatgt attgattttc cccgtctgga tatcgtgctg cgcggcgaat acggcaacct
    22021 gctggaagca aagcagcagc gaatggtgga aggagaaatg ctgtttattc cggcacgcgc
    22081 ggctaattta ccgatcaaca acaaaccggt gatgctgtta agcctggtgt tcgcaccgac
    22141 ctggcttggg ttatcgtttt acgatagccg caccacgtcg ttgttgcatc ctgctcgcca
    22201 gatccagctt cccagcctgc aacgcggtga aggtgaagcg atgcttaccg ccctcactca
    22261 tcttagccgt tcgccgctgg agcagaatat cattcagcca ctggtgttaa gtttgctgca
    22321 tctttgccgc aacgtggtga atatgccgcc gggtaattcg caaccgcgcg gcgattttct
    22381 ctatcacagc atttgtaact gggttcagga taattatacc cagccgctca cccgcgagag
    22441 cgtggcgcag ttttttaata tcacgcccaa tcatctgtca aaactgtttg ctcagcatgg
    22501 aacgatgcgt tttatcgagt atgtgcgttg ggtgcgaatg gcgaaggcga ggatgatttt
    22561 gcagaaatat catctgtcaa ttcatgaagt ggcacagcgt tgcggttttc cggatagcga
    22621 ctatttttgt cgcgttttcc ggcgtcagtt tggtctgacg ccgggagagt acagcgcccg
    22681 ttttcagggc taacgtcaga aggttaattc tgtttccagc agcgtcagga tactttgtgc
    22741 atcttgcgcg gcaaacaacg actggcggaa gtttttattc accagtttac gcgccagctg
    22801 cgagaagact ttcacatgat tcatcccttc gttagcaccc agcgtcagca tgatcaccag
    22861 ttcgacttcg cccatttctg actgccagtc aatcggtttc gccagccggg caatgctgat
    22921 actggaatga cggatccact gagatttggt gtgcgggatc gctacgccaa aaccaacgcc
    22981 ggtggtaaca atctcttccc gctgccagac atcttcttcc agctcaaacg gatgttcagt
    23041 gcgcccgtta acgccgaggt tgccgcacag gaactggatc gcctgctctt tattgctaaa
    23101 atcctgatca acaaagatat tctccagcgc cagcagtggg cgaacgtctt cttccggcgt
    23161 aaaggcggtg agtaacgctt caatttcctg cgcactgcgg cattcacatg cctgacgcgc
    23221 cagttcccga cacgcctcgc tatccagttg acgaagctgg cttttcaccg ccggaatacg
    23281 cgggctactc atactcagct catccaggcc cagcccaagc agtagcggca gataacggct
    23341 ttcaccgccc agttcaccgc aaatgcctac ccatttgccc cgctgatgcg cagtggtaac
    23401 tatttgctgc aacatgcgca ggaacgatgg cgtaatcggg ttatatagcg gcgatacgcg
    23461 cgggttatta cgatcgaccg catacagata ctgggtcata tcgttggagc cgatactgaa
    23521 gaaatcgacc tcatcgcaga agtggtcgat gatgtagcac accgacggca cttccaccat
    23581 gatcccaagc gtaatcgtct ctgcatgacg caggccatcg cgcttaagct caacgatcgc
    23641 tttttggatc tcgcccttca cccataagat ctgatcgaga ctgtggacca tcgggatcat
    23701 caactgggcg ttgccaaaac tggcggcgcg caaaatcgcc cgtagttgag tgcggaacag
    23761 gccagcaaat tccgggtaaa tacgtaccgc gcgatagccg aggaacgggt tctcttcctg
    23821 gggaatattc agataaggaa tgcttttatc gccaccgatg tccattgtgc ggaagataat
    23881 cggcttgtcg cccgctgcca gtagcacctg ctggtaggct tcaaattgct cctgctcgtc
    23941 cggcgcgctg tcgcgatcca tatagagcat ttcagtacgg aacagtccaa cgccttccgc
    24001 gccgttggca aacgcgcctg gcgcttccag agcggtgccg atattcgccg caatatcaat
    24061 acgcttgtta tcacgggaat aggccagctg cgcggcggcc tgcgcctgtt gtttttggcg
    24121 tttatccgcc agcgtctgtg cgacctgata ataaccgctc accgcgtcat tcgggttaat
    24181 cgccagcacg ccgcactggg cgtcaagccc gccggttgcc cggcataacg ggcaatcgca
    24241 tccagcggca ggccgctcag taccgggatc gccgaggcgc gggccagaat cagggtatgc
    24301 gaggtgcgcc cagttttctc cagaatcatg cctgcaagat tttttaaatc gaggctcaaa
    24361 aactggcttg gggttaaatc ctcggctacc agaatagtcg gtttttccag caccagattg
    24421 ttgcgcggct tcagttccgg ccaggtgata tgcagcaact gttcgctaat atcgcgaatg
    24481 tcgctaacac gttcgcgcag ataatcactg gcagaagcag aaagtttggc gcaaacctgc
    24541 tccatattgc tgatgatcgc cgcccccagc ccttgatgct gttctgtcat cagacgacgg
    24601 atattgcccg cgaattcatc atcctgaatc agcgacaaat gggcgctaag gatagttttg
    24661 ctttcgccgt cacgctcacg caattgctgg ttcagttgct cggcaagcgt tgcaaggctg
    24721 tgctccagcc gggtggaatc ttgcgcactg gcggggattg cccgataact gtcgaggctg
    24781 tcgctttgta acagggtcag cgtacccacg ccgacgctgc ttgccagcac attgccgtac
    24841 agtaaatccg ggttcaggcg gcttaatgaa cgcggcagcg gatgcgccgt cagttctgcc
    24901 tgcgttggct ggatgctgtc gctgtcgata aagcgcacct ggatgtactc ttccaacacg
    24961 cgcttcgcct gctcttcatc gctgccgcta atgttcaggc tgcaactgtc attaaataaa
    25021 gtaccggtgc caatcagcgc cagcgagctt ttcgcatcgg cctttgcgtt ctggcgatgg
    25081 ttgataaagg tgatttcgct ttgccactgg ctgcactgtt ctttaagttc ccacgccgga
    25141 cgagcatgaa gaccgtttgg caaaggacag agaaattgaa tcgttaacat aaccgctccg
    25201 ggttaatcag gagatcatct gaaatccgtc agttgaacaa ccgtctcacg cgtaagacgt
    25261 ttaataaggg cagataaaag ctgctgcatc tgcaaaatgt cacggcaatc ggcaatcggc
    25321 aatcgatgcg gcgcaatgtc cgtggcgggt tgctggcccc atcaccactg taggcacgcc
    25381 ggtgccggtt aagtgcaccg ctccgccgtc cgtgccgccg ttgctgaaca tatctgcctg
    25441 taacggcacg ccaatttctg ccgccacggt ttcgatccac gcggtaagtt ttggcggcgc
    25501 aatcagcgac ttgtcgctta acaccagcat cggcccgtta caaatctgac gatggttagc
    25561 cgcgccataa tcaaagtttt tcgcccagca ggcggtatca agcacaatgg cgacatccgg
    25621 cgacaccgcg cgggtggcag tttgcccgcc gcgtaccccc acctcttcgc tggaactggc
    25681 caccagccac acttccgcag gcagttcagc gctgtgtagt tcgcgcagta acgtcaccag
    25741 caggtagcaa ccgaggcggt catcaaaggc tttccccatc acccgctggt gagggagaac
    25801 ctgaaaagtt gtatcaaagg tgacgcgatc gcctggacga attcccgcct gcatcacttc
    25861 gtcatacgag cgcgtaccaa tatccacgcg catggcgctg acgtcattcc cctgccggtc
    25921 gccgtcaagc aggcctggaa ttttgcactc ttcacgggtg gtgatgcgca ccggctgcag
    25981 ctggcgggca gccatgcgca cgttgccaac cggcagcaca tcaattgccc cttcgcggga
    26041 gatgctgcgc accataaatc ccacttcgtc catatgggcg cagatcatca ccttcggccc
    26101 tgtcgattca ttgaggcgga tccgcaccga tcccagacca tcaaatcgca cttctttttg
    26161 caggcgatcc gcttcttcca gcaggatctg ccgcacttcc tgttccgagg aggcgatcgc
    26221 atctgcctcg ctcaacgctt ttaatagcga taaatccatt atgcctctcc cgtgagcaac
    26281 actgttttcg gcatggcgta gagcacttct gcgccttgcg gggtaaccag cacaacatct
    26341 tcgatgcgca cgcccccttg ccctggcaaa taaatccccg gctccacggt cagcaacatg
    26401 cctggctgta gcgtcttggt cccccgcggt gaaaaacgcg gatcttcatg gacttcaatg
    26461 ccgatagcgt gaccagtgtt atgaccgaaa tagtcgccaa atccagcctc ggtaatgacc
    26521 cggcgcgcgg cgtcgtcaat ctgctggcag cgcacgccgg ggcgaattgc agagattgcc
    26581 gcgagctgtg cctgcaggac aatctgatag acgtcaaaca gcgggtgaga ttcggcgctc
    26641 accccttcgc cattcaccag caaggtgcgc gtcatatcag agcagtagcc ctgatacagc
    26701 gcaccaaaat cgagagtgac aaactcgccc gctgcaacaa tcttgtcgct ggctttgccg
    26761 tgcggcagca ccccgcgcca gccgctggcg acaatggtgt caaaagaggc tttttctgcg
    26821 ccctgctggc gcataaacca ctccagttca gcggctatct cgcgctcgct catccccgcc
    26881 tgaataaagc ggcgaatatg ctccgctccg cgatcggcaa tcccacaggc gaggcggatt
    26941 atctccacct cctctggcgt tttgatttgc cgcagcacat ccggcgtggc gctaaccagt
    27001 ttcgcattga gttcagactt ccagcggtgc gctgtttccc aactcacctg ctggccttca
    27061 aaaccgagcg tttgcaactg ctcatcggca atgatttgat tgacgatagt ggtaagcgtg
    27121 ttcgtcgcgt caagcaaatg cagctggtag ccttgcgcac gggcttccac ctcaacgaaa
    27181 tagcgcgaat ctaccagaat gtgcgcactt tcacggctaa taaccacata gcctgatccg
    27241 gtggagatcc ccagatgcgg ctgtttgttc tgccgtgagg agagaagcac tgcatccagt
    27301 tgttgcgcct taagccagtc gcgcagcgaa gcgagtaatg tcatctggat tttccttctt
    27361 acaggctatc gattaacaat ttgcctttac ggaacatcat cagacgcagg aacaccacca
    27421 tcagcgcagt tatgactgcc cccagcgcga tccccgccat atagacgcca aggttagtga
    27481 ccagcggcca tgcccagata gcggattccg ggaaccattg cactgcgccc agccagacag
    27541 cggcggttga gccgacaatc gcgccgacca tatacgacgg aatggcggtg atggggcttt
    27601 ccagcgcaaa cggaatcgca ccctcactaa tccccataaa ggcaaggaac atcgcggtct
    27661 taccctgcgg ataaagttga gcgttgaaca ggcgtttgcc ggttaaacga cggtcaataa
    27721 tggtcgccag ccccagacca atcggaggaa taacgatagc gatagaacga gcggtgaccg
    27781 gtaatacgtg gtcagtggta aagctgaagg caacgaaacc tgcggctttg ttgatcgggc
    27841 caccaaggtc gattgctgtc gccgcggcga tccccattgc gtacatcagc gcgcccttct
    27901 cacctgcggc agtcagcacg gtacggatac cgccgttgat ccagccgcca aagggggtaa
    27961 tgacgtagta catcgccagc atgacaaaaa tggcggaaag aatcggtagc aaaaatgtgg
    28021 ttttgaacgc taacaggaaa tccggtaact ggattttctg gttcatccac ttcacaaggt
    28081 aacccgcgac gatagaaata atcagcgcac caatgaaggt ggacggcacc ggcgaagagg
    28141 tcgcccattg catagtgctg ggatcgaagt tcagcagttg cgtcggctgg gtagacatca
    28201 agccgccgat aaaaccagcc gggaacgcca gtttgccacc gatagagttc gccacaaaag
    28261 cagcaaacat cggaatggca aaaccaaaca acacgccgcc gaaggactgc gacagccagg
    28321 caaatttcag taaggagagg tcgaaaccgg agaatttccc gctattaaga gcatccatga
    28381 tgccgatctc agcaggaatt ttaagccagc tataagcaat cagctggctg aaagcgagga
    28441 tcacaccgcc cataattaag gtcggcacca tgcgtgaaat ccctgacatc acatgctgcg
    28501 ggagttcacc ccagaagctg cttttagagg cctgcggatt cttaactgcc gctgccgcac
    28561 cggatgcgcc aggcacaacg gttgcactgc gttttttaat ggccataaca attatccctg
    28621 tcgaatatta ctgttgttca gaggcaatca tctcttcgat ttctttgatg atgcccgcag
    28681 cgtttttaat tgcgtcctgc aaagtgattt cataaacgtc gcgtgattcg aaacgctcat
    28741 tatcttccgg ggtaactgcc acggagtgga tgatgatggt tgcttcggcg atatcctgcg
    28801 ccgtcaggcg attctggata ccgtccgcgc cctgggtttc aattttcact tcataaccgg
    28861 cttctaccgc cgcttcttcc aacgcctgag cggccataaa ggtgtgagct aggcccattg
    28921 ggcaggcaca taaggcaatc agtttcttac tcatcgttaa ttcctcattc agtgatagtt
    28981 gacgagtgaa attatgaacg tgcaaaacaa atcgccgtta ccagacaaat aatgcattta
    29041 ctggagaatt aatcccgctg tacggaagtg tgacgcaggt cggccttgtg aggggacaca
    29101 aagaaaaatt gaattaactg tatgatttaa aagattatcg ggagagttac ctcccgatat
    29161 aacaggaagg atttacagaa tgtgccctaa ggtctggcgt aaatgtgcac cggaaccgag
    29221 aagacccgga ttgtcatgga cgatgagata caccggaata tcatggacat attctttaaa
    29281 gcgcccttta tcttcaaatg cagcacggaa accagaggct ttgaagaact caaggaagcg
    29341 cggcacgata ccgcccgcaa taaacacgcc gccaaatgtc ccgagattga gcgccagatt
    29401 gccgccaaaa cggcccataa tgacgcaaaa cagcgacaac gcgcggcggc aatcggtaca
    29461 gctgtcagcc agcgcgcgtt cggtaatatc ttttggcttg agattttctg gcaggcggtt
    29521 gtcagctttc acaattgcgc gatacaaatt caccagccca gggccagaaa gcacgcgctc
    29581 cgccgaaaca tgaccaattt ccgcacgcaa tatttcgagg ataatggcct cttcttcact
    29641 attcggcgca aaatcaacgt gaccgccttc gcccggcaag cttacccaac gcttatcgac
    29701 atggaccaga tgcgcaaccc caagccctgt tccggcaccg taaaccgcaa taggtttacc
    29761 ttctaccggt tctgcgccac caaactgaat cagatgctct tttttcagca tcgggatcgc
    29821 catcgataca gcggtaaaat cgttaataat ttccagatgg ctaaaaccga gattcttttt
    29881 catttcggca attgagaacg cccaggtatg gttggtcatt gccacccagt caccggtaat
    29941 tgggcaagcg atggcaatac agccgtcttt cacctcgacc ttatgttctt caagataaac
    30001 gcgaatgacc gcttcgaggc tggggtaatc aagccctgaa taggtcttag cctgcgagat
    30061 ttcaccactg gcaatatcac acagagcaag acgtgcgttg gtgccgccca catcaccgac
    30121 taatgcatac tttatcattc ttcaactgct ccgctaaagt caaaataatt ctttctcaca
    30181 ctgtaaatac ctgggggcat aacaacaacg ccggaaaggc aggctccctg taaatatcga
    30241 tctgggtcac acatttactt tatcgtttca gcaccaattg cagcgatgcc tttttgcaag
    30301 ctgggcaaac taagtatctg accccgcata aggaatagaa catgctccat ccgcgagcca
    30361 gaaccatgtt gttattatcg ctccccgccg tggcaattgg gattgcgtcc agtcttattc
    30421 tgattgtggt gatgaaaatc gcctcggtat tacagaattt gctctggcaa cgactgccgg
    30481 gaactctggg gatagcccag gattcacctc tctggatcat cggtgtatta acgctaacgg
    30541 gtattgcggt ggggttggtt atccgtttca gccagggtca tgccggacca gaccccgcct
    30601 gtgaaccgct gatcggcgca ccagttccgc cctctgcgct accaggactt atcgtagcat
    30661 taattctcgg tcttgctggc ggcgtcagcc tggggccgga acatccgatc atgaccgtca
    30721 atatcgccct tgccgtcgcc attggcgctc gtctgttacc gcgcgtcaac cgaatggagt
    30781 ggactatttt agcctctgcc ggaaccatcg gcgcgctgtt tggcacacct gttgcagcgg
    30841 cgttgatatt ttcgcaaacc ttaaatggca gtagtgaagt tccgctatgg gatcgtctct
    30901 ttgcgccgtt aatggcggca gcagctggtg cactaactac cggattattt ttccatcccc
    30961 atttttcact gcccattgcg cattacggac agatggaaat gaccgatatt ctcagcggtg
    31021 caattgtcgc ggcgattgcc atcgcagcag ggatggtcgc cgtatggtgc ttaccacggt
    31081 tgcacgcgat gatgaatcaa atgaaaaatc cggtgctcgt gctgggtatt ggcggattta
    31141 ttctcggtat tctgggggtt attggtggac cagtttcgct gtttaaaggg ctggatgaga
    31201 tgcagcagat ggtggcaaat caggctttca gcaccagcga ttactttttg ctagcggtaa
    31261 ttaaacttgc cgccctggtc gttgctgccg ccagtggctt tcgcggtggg cgaatcttcc
    31321 cggcagtgtt tgtcggcgtg gcattagggt tggtgctgca tgagcacgta cccgccgtac
    31381 cagcggcaat aaccgtttct tgcgctattc tcggcatcgt gctggtggta acacgcgatg
    31441 gctggttaag tctttttatg gcggcggtcg ttgtacccaa taccacattg ctaccgctgc
    31501 tctgtatcgt catgcttccg gcatggctgt tattagcagg taagccgatg atgatggtca
    31561 atcgtccgaa gcaacagcca ccccacgata acgtttagca aaaaatgctc tcctttatga
    31621 tttaagagtt atggcgatga tacggggctt tacctccccg taatattgcg ttaacaggcc
    31681 gctgacggct tcgatcgtga aggagaataa caatgttcag gtcactgttt ctggcggccg
    31741 ccctgatggc atttaccccg cttgcagcaa acgcaggtga aatcacccta ctgccatcaa
    31801 tcaaattaca aattggcgat cgcgatcatt acggtaatta ctgggacggt ggtcactggc
    31861 gcgaccgtga ctactggcat cgcaattatg agtggcgcaa aaaccgttgg tggcgtcatg
    31921 ataatggcta tcatcgtggc tgggataagc gtaaagcgta tgagcgtggc tatcgtgaag
    31981 gctggcgcga tcgtgacgat catcgcggaa aaggccgcgg acatggacac cgccattaaa
    32041 cacattcgcc aatggagcac aatgcctgat gcgacgctag cgcgtcttat caggcctaca
    32101 aaccggatct ttaacgcgta gggcggataa ggcgtttacg ccgcatccgc caatagtgcc
    32161 agatgcgacg ctcattcaac tacaatccca gcgccgtccc caccaacaac cagatattca
    32221 gcgccacgac cagcactaca atcacccagc ctgtctgttt tacgcgtttg ctgttcacca
    32281 gatcgcccat caacttgctg tcactggtga aaatcagcag tggaaccagc gccagggcga
    32341 taccaaaact taacagcacc tgactcataa ccagaatccg tgtcggatct aatcccatca
    32401 gaatgacaat aaatgacggc agcatggtga ctgtacgacg cacccacagc gggatatgga
    32461 agcgaatgaa cccctgcatc accacctgcc ctgccagtgt ccccactacc gttgaggaca
    32521 gtccggcagc aaccagactt aacccaaaga ccgttgccgc agcatggctt aacagcggtt
    32581 gcagcgtcag ataagcctca tcaagatcgg caacaccagt atgaccagaa aagtggaacg
    32641 ccgccgcagc tgtagccatc atcgccagat tgacaaaacc ggcaatagtc atggcgatag
    32701 ccacatccca tttggtggcg gaataacgtt gttgacgcga accgccatgt aaatgctgag
    32761 tgagcgagga gtgcaaataa atcacatgcg gcataatcgt cgcccctaac acgcctgctg
    32821 ccaagaagac cgcttccgaa gtaggtaaac tcgggatcac cattccttta cccagctgcg
    32881 ccaggttagg ctgggagaaa atcaactcga caatgtaagc cgcggcaaca aacaacagta
    32941 acccgccaat cactttctcc agcggttttt gcccgcgacg ttgcagcatt aaaatcagga
    33001 aagtcgcgat ccccgtcagc accgcgccct gcaacaacga aacaccaaga atgagtttaa
    33061 aaccgatcgc cgcaccaata aattccgcca ggtcggttgc catcgcaata atttctgcct
    33121 gaacccaata gaaccacact acgggacgcg gatagtgatc gcgaatctgc tccgccagat
    33181 ttttaccggt ggcaatccct agtttggcag agaggatctg aatcagcatc gccatcaggt
    33241 tggcccaaac gacaacccac agtagctgat agccgaagct ggcacccgcc tgaatattgg
    33301 tcgcaaagtt accgggatcg atataaccaa tcgccgcaat gaacgcaggt cccattaatg
    33361 cgagcctcat cttgcgcgcc gcccgtccgc tgctactctc aacgcgatag ttcgtcatct
    33421 tgtgcctcta aaacatagcc tttgctatgt ttcatgctat gataaacgag aatgattatc
    33481 aaattcattt aaatggattg tggtgatttc tgtgatagac caggattatg actacgaaaa
    33541 gattgatgac ttgaatgtta tggttatgtt taatgttagc acatttacat aactttcagc
    33601 ttccatacac aacatagcag aaatgtatga cagatcacta tttttgaagc ctgtcacagg
    33661 acgtcattat agtgtgtgtc agatctcgtt ttccttaacc atgttacata gaatgtgcac
    33721 ggaaatttaa cctgcctcat atttggagca aatatggacc gcgtccttca ttttgtactg
    33781 gcacttgccg ttgttgcgat tctcgcactg ctggtaagca gcgaccgcaa aaaaattcgt
    33841 atccgttatg ttattcaact gcttgttatc gaagtgttac tggcgtggtt cttcctgaac
    33901 tccgacgttg gtttaggctt cgtgaaaggc ttctccgaaa tgttcgaaaa actgctcgga
    33961 tttgccaacg aagggactaa cttcgtcttt ggtagcatga atgatcaagg cctggcattc
    34021 ttcttcctga aagtgctgtg cccaatcgtc tttatctctg cactgatcgg tattctccag
    34081 cacattcgcg tgttgccggt gatcatccgc gcaattggtt tcctgctctc caaagtcaac
    34141 ggcatgggca aactggaatc ctttaacgcc gtcagctccc tgattctggg tcagtctgaa
    34201 aactttattg cctataaaga tatcctcggc aaaatctccc gtaatcgtat gtacaccatg
    34261 gctgccacgg caatgtccac cgtgtcgatg tccatcgttg gtgcatacat gaccatgctg
    34321 gaaccgaaat acgtcgttgc tgcgctggta ttgaacatgt tcagcacctt tatcgtgctg
    34381 tcgctgatca acccttaccg tgttgatgcc agtgaagaaa acattcagat gtccaacctg
    34441 cacgaaggtc agagcttctt cgaaatgctg ggtgaataca ttctggcagg tttcaaagtt
    34501 gccattatcg ttgccgcgat gctgatcggc tttatcgccc tgatcgctgc gctgaacgca
    34561 ctgtttgcca ccgtgactgg ctggtttggc tacagcatct ccttccaggg cattctgggc
    34621 tacatcttct atccgattgc atgggtgatg ggtgttcctt ccagtgaagc actgcaagtg
    34681 ggcagtatca tggcgaccaa actggtttcc aacgagttcg ttgcgatgat ggatctgcag
    34741 aaaattgctt ccacgctctc tccgcgtgct gaaggcatca tctctgtgtt cctggtttcc
    34801 ttcgctaact tctcttcaat cgggattatc gcaggtgcag ttaaaggcct gaatgaagag
    34861 caaggtaacg tggtttctcg cttcggtctg aaactggttt acggctctac cctggtgagt
    34921 gtgctgtctg cgtcaatcgc agcactggtg ctgtaagacc atacataaaa aagccgggga
    34981 taattccc
//
LOCUS       DADMHC010000020        34878 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.020, whole genome shotgun sequence.
ACCESSION   DADMHC010000020 DADMHC010000000
VERSION     DADMHC010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 34878)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34878)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34878
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.020"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..410
                     /gene="speG"
                     /locus_tag="JNZ57_000782"
     CDS             <1..410
                     /gene="speG"
                     /locus_tag="JNZ57_000782"
                     /EC_number="2.3.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="spermidine N1-acetyltransferase"
                     /protein_id="HAY8827099.1"
                     /translation="IHDQSERRFVVECDGEKAGLVELVEINHVHRRAEFQIIISPEYQ
                     GKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFTVEGELMHEFFIN
                     GQYRNAIRMCIFQHQYLAEHKTPGQTLLKPTAQ"
     gene            complement(413..1123)
                     /locus_tag="JNZ57_000783"
     CDS             complement(413..1123)
                     /locus_tag="JNZ57_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416102.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnfC family lipoprotein"
                     /protein_id="HAY8827100.1"
                     /translation="MKYKLLPCLLAIFLTGCDRTEVTLSFTPEMASFSNEFDFDPLRG
                     PVKDFTQTLMDEQGEVTKRVSGTLSEEGCFDSLELLDLENNTVVALVLDANYYRDAET
                     LEKRVRLQGKCQLAELPSAGVSWETDDNGFVIKASSKQMQMEYRYDDQGYPLGKTTKS
                     NDKTLSVSATPSTDPIKKLDYTAVTLLNNQRVGNVKQSCEYDSHANPVDCQLIIVDEG
                     VKPAVERVYTIKNTIDYY"
     gene            1231..1536
                     /locus_tag="JNZ57_000784"
     CDS             1231..1536
                     /locus_tag="JNZ57_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707474.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1161 domain-containing protein"
                     /protein_id="HAY8827101.1"
                     /translation="MKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPE
                     SSFTLSIVPNDQVDQPDSQVVGHCANDTHKILYTRTTSANVSAPAQSTQDGAPAEPQ"
     gene            1735..4161
                     /locus_tag="JNZ57_000785"
     CDS             1735..4161
                     /locus_tag="JNZ57_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase subunit A"
                     /protein_id="HAY8827102.1"
                     /translation="MSKNDRMVGISRRTLVKSTAIGSLALAAGGFSLPFTLRSAAATV
                     QQASEKVIWGACSVNCGSRCALRLHVKDNEVTWVETDNTGSDEYGNHQVRACLRGRSI
                     RRRINHPDRLNYPMKRVGKRGEGKFERISWDEALDTIASSLKKTVEQYGNEAVYIQYS
                     SGIVGGNMTRSSPSVSAVKRLMNCYGCSLNQYGSYSTEQISCAMPYTYGSNDGNSTTD
                     IENSKLVVMFGNNPAETRMSGGGITYLLEKAREKSNAKMIVIDPRYTDTAAGREDEWL
                     PIRPGTDAALVAGIAWVLINENLVDQPFLDKYCVGYDEKTLPADAPKNGHYKAYILGE
                     GDDNTAKTPQWASQITGIPVDRIIKLAREIGTAKPAYICQGWGPQRQANGELTARAIA
                     MLPILTGNVGISGGNSGARESTYTITIERLPVLDNPVKTSISCFSWTDAIDHGPQMTA
                     IRDGVRGKDKLDVPIKFIWNYAGNTLVNQHSDINKTHEILQDESKCEMIVVIENFMTS
                     SAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFLQPVTSEKFERKPIYWILSEVAKR
                     LGPDVYQKFTEGRTQEQWLQHLYAKMLAKDPALPSYDELKKMGIYKRKDPNGHFVAYK
                     AFRDDPEANPLKTPSGKIEIYSSRLAEIARTWELEKDEVISPLPVYASTFEGWNSPER
                     RTFPLQLFGFHYKSRTHSTYGNIDLLKAACRQEVWINPIDAQKRGIANGDMVRVFNHR
                     GEVRLPAKVTPRILPGVSAMGQGAWHEANMSGDKIDHGGCVNTLTTLRPSPLAKGNPQ
                     HTNLVEIEKI"
     gene            4222..6471
                     /locus_tag="JNZ57_000786"
                     /pseudo
     CDS             4222..6471
                     /locus_tag="JNZ57_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416105.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
     gene            6467..7015
                     /gene="dmsB"
                     /locus_tag="JNZ57_000787"
                     /pseudo
     CDS             6467..7015
                     /gene="dmsB"
                     /locus_tag="JNZ57_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213046.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit B"
     gene            7017..7871
                     /locus_tag="JNZ57_000788"
     CDS             7017..7871
                     /locus_tag="JNZ57_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit"
                     /protein_id="HAY8827103.1"
                     /translation="MGNGWHEWPLVIFTVLGQCVVGALIVSGIGWFAAKNDADRQRIV
                     RGMFFLWLLMGIGFIASVMHLGSPLRAFNSLNRIGASGLSNEIAAGSIFFAVGGLWWL
                     VAVIGKMPQALGKLWLLVSMALGVIFVWMMTCVYQIDTVPTWHNGYTTLAFFLTVLLS
                     DPILAAAILRAARVTFNTTPFAIISVLALIACAGVIVLQGLSLASIHSSVQQASALVP
                     DYASLQVWRVVLLCASLGCWLCPLIRRREPHVAGLILGLILILGGEMIGRVLFYGLHM
                     TVGMAIAG"
     gene            7914..8528
                     /gene="dmsD"
                     /locus_tag="JNZ57_000789"
     CDS             7914..8528
                     /gene="dmsD"
                     /locus_tag="JNZ57_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707489.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tat proofreading chaperone DmsD"
                     /protein_id="HAY8827104.1"
                     /translation="MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWET
                     QWPLPEASLAPLVTAFQTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDS
                     TLALRQWMREKGIQFEMKQYEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWST
                     RFLDVFIEKAEHPFYRALGELSRLTLAQWQSQLLIPVAVKPLFR"
     gene            8687..9979
                     /gene="clcB"
                     /locus_tag="JNZ57_000790"
     CDS             8687..9979
                     /gene="clcB"
                     /locus_tag="JNZ57_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001315626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="voltage-gated ClC-type chloride channel ClcB"
                     /protein_id="HAY8827105.1"
                     /translation="MHHLHIYPDLRTMFRRLLIATVVGILAAFAVAGFRHAMLLLEWL
                     FLNNDSGSLVNAATNLSPWRRLLTPALGGLAAGLLLMGWQKFTQQRPHAPTDYMEALQ
                     TDGQFDYAASLVKSLASLLVVTSGSAIGREGAMILLAALAASCFAQRFTPRQEWKLWI
                     ACGAAAGMAAAYRAPLAGSLFIAEVLFGTMMLASLGPVIISAVVALLVSNLINHSDAL
                     LYNVQLSVTVQARDYALIISTGVLAGLCGPLLLTLMNACHRGFVSLKLAPPWQLALGG
                     VIVGLLSLFTPAVWGNGYSTVQSFLTAPPLLMIIAGIFLCKLCAVLASSGSGAPGGVF
                     TPTLFIGLAIGMLYGRSLGLWFPDGEEITLLLGLTEMATLLAATTHAPIMSTLMICEM
                     TGEYQLLPGLLIACVIASVISRTLHRDSIYRQHTAQHS"
     gene            complement(9932..10627)
                     /gene="bioD"
                     /locus_tag="JNZ57_000791"
     CDS             complement(9932..10627)
                     /gene="bioD"
                     /locus_tag="JNZ57_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310326.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HAY8827106.1"
                     /translation="MLKRFFITGTDTSVGKTVVSRALLQALASQGKTVAGYKPVAKGS
                     KETPEGLRNKDALVLQSVSTIELPYEAVNPIALSEEESSVAHSCPINYTLISNGLANL
                     TDKVDHVVVEGTGGWRSLMNDLRPLSEWVVQEQLPVLMVVGIQEGCINHALLTAQAIA
                     NDGLPLIGWVANRINPGLAHYAEIIDVLGKKLPAPLIGELPYLPRAEQRELGQYIRLA
                     MLRSVLAVDRVTV"
     gene            complement(10752..11972)
                     /gene="mlc"
                     /locus_tag="JNZ57_000792"
                     /gene_synonym="dgsA"
     CDS             complement(10752..11972)
                     /gene="mlc"
                     /locus_tag="JNZ57_000792"
                     /gene_synonym="dgsA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor Mlc"
                     /protein_id="HAY8827107.1"
                     /translation="MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAP
                     ASITKIVREMLEAHLVQELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALR
                     DLSSKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTE
                     NGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQV
                     VIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPYGKRCYCGNHGCLETIASVDSILE
                     LAQLRLNQSMSSMLHGQPLTVDSLCQAALRGDLLAKDIITGVGAHVGRILAIMVNLFN
                     PQKILIGSPLSKAADILFPVISDSIRQQALPTYSQHISVESTQFSNQGTMAGAALVKD
                     AMYNGSLLIRLLQG"
     gene            complement(12107..13000)
                     /locus_tag="JNZ57_000793"
     CDS             complement(12107..13000)
                     /locus_tag="JNZ57_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8827108.1"
                     /translation="MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQ
                     IGARLLARTNRSVLLTAAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSS
                     APFIRAVSDTLSLFRRDYPGVHLQTREMNTREQIAPLIEGTLDMGLLRNTALPETLEH
                     AVIVHEPLMAMIPHDHPLANNPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHL
                     TPVITQEVGEAMTIIGLVSAGLGVSILPASFKRVQLNEMRWVPIAEEDAVSEMWLVWP
                     KHHEQSPASRNFRIHLLNALR"
     gene            13107..14359
                     /locus_tag="JNZ57_000794"
                     /pseudo
     CDS             13107..14359
                     /locus_tag="JNZ57_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416113.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            14756..15070
                     /locus_tag="JNZ57_000795"
     CDS             14756..15070
                     /locus_tag="JNZ57_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416114.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid shock protein"
                     /protein_id="HAY8827109.1"
                     /translation="MKKQIEGMTMKKVLALVVAAAMGLSSAAFAAETATTTKAAPAKT
                     THHKKQHKAAPAQKAQAAKKHHKNTKAEQKAPEQKAQAAKKHAGKHSHQQPAKPAAQP
                     AA"
     gene            15163..15246
                     /locus_tag="JNZ57_000796"
     CDS             15163..15246
                     /locus_tag="JNZ57_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827110.1"
                     /translation="MVGRYRFEFILIILILCALIAARFYLS"
     gene            15346..16167
                     /locus_tag="JNZ57_000797"
     CDS             15346..16167
                     /locus_tag="JNZ57_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HAY8827111.1"
                     /translation="MRTTIAVVLGAISLTSAFVFADKPDVAKSANDEVSTLFFGHDDR
                     VPVNDTAQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRF
                     VSNKGLWRYEIHDIEGRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPSGITP
                     LPLFEGDKAALTAALKSAGRKVTQAGYPEDHLDTLYSHQNCEVTGWAQTSVMSHQCDT
                     LPGDSGSPLMLHTNDGWQLIGVQSSAPAAKDRWRADNRAISVTGFRDKLDQLSQK"
     gene            complement(16206..16535)
                     /gene="mdtI"
                     /locus_tag="JNZ57_000798"
     CDS             complement(16206..16535)
                     /gene="mdtI"
                     /locus_tag="JNZ57_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug/spermidine efflux SMR transporter
                     subunit MdtI"
                     /protein_id="HAY8827112.1"
                     /translation="MAQFEWVHAAWLALAIVLEIVANVFLKFSDGFRRKIFGLLSLAA
                     VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAG
                     MIMVKLA"
     gene            complement(16522..16887)
                     /gene="mdtJ"
                     /locus_tag="JNZ57_000799"
     CDS             complement(16522..16887)
                     /gene="mdtJ"
                     /locus_tag="JNZ57_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug/spermidine efflux SMR transporter
                     subunit MdtJ"
                     /protein_id="HAY8827113.1"
                     /translation="MYIYWILLGLAIATEITGTLSMKWASVSEGNGGFILMLVMISLS
                     YIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLI
                     KSGTRKARKPELEVNHGAV"
     gene            17299..18333
                     /gene="tqsA"
                     /locus_tag="JNZ57_000800"
     CDS             17299..18333
                     /gene="tqsA"
                     /locus_tag="JNZ57_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2 transporter TqsA"
                     /protein_id="HAY8827114.1"
                     /translation="MAKPIITLNGLKIVIMLGMLVIILCGIRFAAEIIVPFILALFIA
                     VILNPLVQHMVRWRVPRVLAVSILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIM
                     TPLQALEPLLQRVGIDVSVDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLF
                     MLLEVPQLPGKFQQMMARPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAAL
                     DVRFAFVWGLLAFALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFG
                     NILEPRIMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQTAGGQSI
                     AVLLSDLNKE"
     gene            complement(18358..19746)
                     /gene="pntB"
                     /locus_tag="JNZ57_000801"
     CDS             complement(18358..19746)
                     /gene="pntB"
                     /locus_tag="JNZ57_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000014033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HAY8827115.1"
                     /translation="MSGGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIA
                     LIATIFGPDTGNVGWILLAMVIGGAIGIRLAKKVEMTEMPELVAILHSFVGLAAVLVG
                     FNSYLHHDAGMAPILVNIHLTEVFLGIFIGAVTFTGSVVAFGKLCGKISSKPLMLPNR
                     HKMNLAALVVSFLLLIVFVRTDSVGLQVLALLIMTAIALVFGWHLVASIGGADMPVVV
                     SMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFG
                     TDGSSTGDDQEVGEHREITAEETAELLKNSHSVIITPGYGMAVAQAQYPVAEITEKLR
                     ARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGAND
                     TVNPAAQDDPKSPIAGMPVLEVWKAQNVIVFKRSMNTGYAGVQNPLFFKENTHMLFGD
                     AKASVDAILKAL"
     gene            complement(19757..21289)
                     /gene="pntA"
                     /locus_tag="JNZ57_000802"
     CDS             complement(19757..21289)
                     /gene="pntA"
                     /locus_tag="JNZ57_000802"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HAY8827116.1"
                     /translation="MRIGIPRERLTNETRVAATPKTVEQLLKLGFTVAVESGAGQLAS
                     FDDKAFVQAGAEIVEGNSVWQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQNPELM
                     QKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAA
                     GKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKE
                     EAGSGDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMK
                     TGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPGRLPTQSSQLYGTNLVNL
                     LKLLCKEKDGNITVDFDDVVIRRVTVIRAGEITWPAPPIQVSAQPQAAQKAAPEVKTE
                     EKCACSPWRKYALMALAIILFGWLASVAPKEFLGHFTVFALACVVGYYVVWNVSHALH
                     TPLMSVTNAISGIIVVGALLQIGQGGWVSFLSFIAVLIASINIFGGFTVTQRMLKMFR
                     KN"
     gene            21813..22757
                     /locus_tag="JNZ57_000803"
     CDS             21813..22757
                     /locus_tag="JNZ57_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HAY8827117.1"
                     /translation="MKLKNTLLASALLSATAFSVNAATELTPEQAAAVKPFDRVVVTG
                     RFNAIGEAVKAVSRRADKEGAASFYVVDTSDFGNSGNWRVVADLYKADAEKAEETSNR
                     VINGVVELPKDQAVLIEPFDTVTVQGFYRSQPEVNDAITKAAKAKGAYSFYIVRQIDA
                     NQGGNQRITAFIYKKDAKKRIVQSPDVIPADSEAGRAALAAGGEAAKKVEIPGVATTA
                     SPSSEVGRFFETQSSKGGRYTVTLPDGTKVEELNKATAAMMVPFDSIKFSGNYGNMTE
                     VSYQVAKRAAKKGAKYYHITRQWQERGNNLTVSADLYK"
     gene            22943..24325
                     /locus_tag="JNZ57_000804"
     CDS             22943..24325
                     /locus_tag="JNZ57_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY8827118.1"
                     /translation="MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWG
                     ITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSY
                     LVIVFSALSFFTDTPELRLFGDGNTWQSIVGASALLWIVHFLILRGVQTAASINLVAT
                     LAKLLPLGLFVVLAMMMFKLDTFKLDFTGLVLGVPVWEQVKNTMLITLWVFIGVEGAV
                     VVSARARNKRDVGKATLLAVLSALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEM
                     MGPWGEIIIAASLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRIFARQNAQAAPSASL
                     WLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHKAVGVG
                     ACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLNRQEMVLIGMLLIA
                     SVPATWMLVG"
     gene            24362..25084
                     /gene="folM"
                     /locus_tag="JNZ57_000805"
     CDS             24362..25084
                     /gene="folM"
                     /locus_tag="JNZ57_000805"
                     /EC_number="1.5.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydromonapterin reductase"
                     /protein_id="HAY8827119.1"
                     /translation="MGKAQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAI
                     DGLLKAGAQCIQADFSTNDGVMAFADEVLKSTHGLRAILHNASAWMAEKPGAPLADVL
                     ACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALD
                     NMTRSFARKLAPEVKVNSIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVD
                     YLLTSCFVTGRSFPLDGGRHLR"
     gene            complement(25081..25416)
                     /locus_tag="JNZ57_000806"
     CDS             complement(25081..25416)
                     /locus_tag="JNZ57_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlpM family protein"
                     /protein_id="HAY8827120.1"
                     /translation="MGLVIKAALGALVVLLIGVLAKTKNYYIAGLIPLFPTFALIAHY
                     IVASERGIEALRATIIFSMWSIIPYFVYLVSLWYFTGMMRLPAAFVGSVACWGISAWV
                     LIICWIKLH"
     gene            25544..26272
                     /gene="rstA"
                     /locus_tag="JNZ57_000807"
     CDS             25544..26272
                     /gene="rstA"
                     /locus_tag="JNZ57_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416125.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator RstA"
                     /protein_id="HAY8827121.1"
                     /translation="MNTIVFVEDDAEVGSLIAAYLAKHDMQVTVEPRGDQAEETILRE
                     NPDLVLLDIMLPGKDGMTICRDLRAKWSGPIVLLTSLDSDMNHILALEMGACDYILKT
                     MPPAVLLARLRLHLRQNEQATLTKGLQETSLTSLTPYKALHFGTLTIDPINRVVTLAN
                     TEISLSTADFELLWELATHAGQIMDRDALLKNLRGVSYDGLDRNVDVAISRLRKKLLD
                     NAAEPYRIKTVRNKGYLFAPHAWE"
     gene            26276..27577
                     /gene="rstB"
                     /locus_tag="JNZ57_000808"
     CDS             26276..27577
                     /gene="rstB"
                     /locus_tag="JNZ57_000808"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     RstB"
                     /protein_id="HAY8827122.1"
                     /translation="MKKLFIQFYLLLFVCFLVMSLLVGLVYKFTAERAGKQSLDDLMN
                     SLLYLMRSELREIPPHDWGKTLKEMDLNLSFDLRVEPLSKYHLDDISMHGLRGGEIVA
                     LDDQYTFLQRIPRSHYVLAVGPVPYLYYLHQMRLLDIALIAFIAISLAFPVFIWMRPH
                     WQDMLKLEAAAQRFGDGHLYERIHFDEGSSFERLGIAFNQMADNINALIASKKQLIDG
                     IAHELRTPLVRLCYRLEMSDNLSAAESQALNRDISQLEALIEELLTYARLDRPQNELH
                     LSEPDLPLWLSTHLADIQAVTPDKTVRIKTLVQGHYAALDMRLMERVLDNLLNNALRY
                     CHSTVETSLLLSGNRATLIVEDDGPGIAPENREHIFEPFVRLDPSRDRSTGGCGLGLA
                     IVHSIALAMGGTVNCDTSELGGARFSFSWPLWHNIPQFTSA"
     gene            27653..28582
                     /gene="tus"
                     /locus_tag="JNZ57_000809"
     CDS             27653..28582
                     /gene="tus"
                     /locus_tag="JNZ57_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication terminus site-binding protein"
                     /protein_id="HAY8827123.1"
                     /translation="MARYDLVDRLNTTFRQMEQELAAFAAHLEQHKLLVARVFSLPEV
                     KKEDEHNPLNRIEVKQHLGNDAQSLALRHFRHLFIQQQSENRSSKAAVRLPGVLCYQV
                     NNLSQAALVSHIQHINKLKTTFEHIVTVESELPTAARFEWVHRHLPGLITLNAYRSLT
                     VLHDPATLRFGWANKHIIKNLHRDEVLAQLEKSLKSPRSVAPWTREEWQRKLEREYQD
                     IAALPQNAKLKIKRPVKVQPIARVWYKGDQKQVQHACPTPLIALINRDNGAGVPDVGE
                     LLNYDADNVQHRYKPQAQPLRLIIPRLHLYVAD"
     gene            complement(28579..29982)
                     /gene="fumC"
                     /locus_tag="JNZ57_000810"
     CDS             complement(28579..29982)
                     /gene="fumC"
                     /locus_tag="JNZ57_000810"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HAY8827124.1"
                     /translation="MNTVRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKMPTSL
                     IHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQS
                     NMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQL
                     IPQLKTLTQTLSEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYS
                     LPHVAELALGGTAVGTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQ
                     AHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPENEPGSSIMPGKVNPTQCEALT
                     MLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIE
                     PNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEF
                     DSWVRPEQMVGSMKAGR"
     gene            complement(30125..31771)
                     /locus_tag="JNZ57_000811"
     CDS             complement(30125..31771)
                     /locus_tag="JNZ57_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000066594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HAY8827125.1"
                     /translation="MSNKPFHYQAPFPLKKDDTEYYLLTSEHVSVSEFEGQEILKVAP
                     EALTLLARQAFHDASFMLRPAHQQQVADILRDPEASENDKYVALQFLRNSDIAAKGVL
                     PTCQDTGTAIIVGKKGQRVWTGGCDEAALARGVYNTYIEDNLRYSQNAPLDMYKEVNT
                     GTNLPAQIDLYAVDGDEYKFLCIAKGGGSANKTYLYQETKALLTPGKLKNYLVEKMRT
                     LGTAACPPYHIAFVIGGTSAETNLKTVKLASAKYYDELPTEGNEHGQAFRDVELEKEL
                     LIEAQNLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINRQGIW
                     IEKLEHNPGKYIPEELRKAGEGEAVRVDLNRPMKEILAQLSQYPVSTRLSLNGTIIVG
                     RDIAHAKLKERMDNGEGLPQYIKDHPIYYAGPAKTPEGYASGSLGPTTAGRMDSYVDQ
                     LQAQGGSMIMLAKGNRSQQVTDACKKHGGFYLGSIGGPAAVLAQGSIKSLECVEYPEL
                     GMEAIWKIEVEDFPAFILVDDKGNDFFQQIQLTQCTRCVK"
     gene            31970..33145
                     /gene="manA"
                     /locus_tag="JNZ57_000812"
     CDS             31970..33145
                     /gene="manA"
                     /locus_tag="JNZ57_000812"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416130.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase"
                     /protein_id="HAY8827126.1"
                     /translation="MQKLINSVQNYAWGSKTALTELYGMENPSSQPMAELWMGAHPKS
                     SSRVQNAAGDIVSLRDVIESDKSTLLGEAVAKRFGELPFLFKVLCAAQPLSIQVHPNK
                     RNSEIGFAKENAAGIPMDAAERNYKDPNHKPELVFALTPFLAMNAFREFSEIVSLLQP
                     VAGAHPAIAHFLQQPNAERLSELFASLLNMQGEEKSRALAILKSALDSQQGEPWQTIR
                     LISEFYPEDSGLFSPLLLNVVKLNPGEAMFLFAETPHAYLQGVALEVMANSDNVLRAG
                     LTPKYIDIPELVANVKFEAKPANQLLTQPVKQGAELDFPIPVDDFAFSLHDLSDKETT
                     ISQQSAAILFCVEGDATLWKGSQQLQLKPGESAFIAANESPVTVKGHGRLARVYNKL"
     gene            33246..34754
                     /locus_tag="JNZ57_000813"
     CDS             33246..34754
                     /locus_tag="JNZ57_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HAY8827127.1"
                     /translation="MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQL
                     KLTAPESNLEVSYQNYHRGVFSSQLQLLVKPIAGKENPWIKSGQSVIFNESVDHGPFP
                     LAQLKKLNLIPSMASIQTTLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLK
                     PLNYEQKDEKVAFSGGEFQLNADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLK
                     TDGSSTLASFGERVGNQKLSLEKMTISVEGKELALLEGMEISGKSDLVNDGKTINSQL
                     DYSLNSLKVQNQDLGSGKLTLKVGQIDGEAWHQFSQQYNAQTQALLAQPEIANNPELY
                     QEKVTEAFFSALPLMLKGDPVITVAPLSWKNSQGESALNLSLFLKDPATTKEAPQTLA
                     QEVDRSVKSLDAKLTIPVDMATEFMTQVAKLEGYQEDQAKKLAKQQVEGASAMGQMFR
                     LTTLQDNTITTSLQYTNGQITLNGQKMSLEDFVGMFAMPALNVPAVPAIPQQ"
BASE COUNT         8592 a         8913 c         8588 g         8785 t
ORIGIN      
        1 atattcacga tcagagcgaa cgacgctttg tggtggaatg tgacggcgaa aaagccggtc
       61 tggtggagct ggtggaaatt aaccatgtac atcgccgggc agaatttcag ataattatct
      121 ccccggagta tcaggggaaa ggtctggcaa cccgtgccgc caaattagca atggactatg
      181 gcttcaccgt tctcaatctc tataagctgt atctgatcgt cgataaagag aatgaaaaag
      241 cgattcacat ttaccgcaag cttggcttta cggttgaagg tgaattgatg catgagtttt
      301 ttattaatgg tcaatatcgt aatgccattc gcatgtgtat attccagcat cagtatctgg
      361 cagagcacaa aacaccaggt cagactctcc tgaagccgac cgcacaatag cattaataat
      421 aatcgatcgt atttttgatg gtgtaaaccc gttcgacggc gggttttact ccttcatcaa
      481 caatgatcag ctgacagtcc accggattgg cgtgactgtc atattcacag ctctgtttta
      541 cattaccaac tcgttgatta ttcagtaaag taaccgctgt gtaatctaat tttttgatcg
      601 ggtccgttga tggcgtggcg ctgacagata atgttttgtc gttacttttc gtggttttac
      661 ccagtggata accctgatca tcatagcgat attccatctg catttgtttg ctgctggctt
      721 taatcacgaa gccattatca tcggtttccc aactcacccc ggcagaaggt aattctgcta
      781 gctggcattt tccctgtaaa cgtactctct tctccagcgt ctcggcatca cggtaataat
      841 tggcgtccag taccagagcg accacggtat tattttccag atccagtaat tcgagtgaat
      901 caaaacagcc ttcttccgac aaagtcccag aaacacgttt cgtcacttca ccttgctcat
      961 ccattaatgt ctgagtgaaa tcttttaccg gaccacgcag cggatcaaaa tcgaattcat
     1021 tagagaaact ggccatctca ggggtaaatg aaagtgttac ctctgtgcgg tcacatcctg
     1081 tgaggaatat cgcgagtaag catggtagta atttgtattt cacaacagtc accagagagt
     1141 agagatgatt ctcaatcata gtagcaaata cagtacttta cacgttaaat gctatgctta
     1201 aagaagttat cttcgcgtaa ggagcttatg atgaaactct caacctgctg tgccgcgctt
     1261 ctgctcgccc tcgcctcacc cgcggtactc gccgcgccgg gatcctgtga gcgcatacag
     1321 agcgatatat cacagcgcat tatcaataat ggcgtacccg aaagcagctt cacattaagt
     1381 attgtaccca atgaccaggt tgatcagcct gattcccagg tcgtcgggca ttgtgctaat
     1441 gatacgcata aaattctcta cacccgtacc accagcgcta acgtctctgc tcccgcgcag
     1501 tctacccagg atggcgcgcc tgccgaaccg cagtaataca ttatcgactg aacgccggat
     1561 atgacacatc cggcgatttg aacatacaac ataatcccac cttattactc atacccttct
     1621 attgatgtgg attaataatt cttaacccaa aatgggtaga ccccctctat tgttagcgcg
     1681 ctaaatattc aatacataaa catttatata acgataaaga acagggagtg agttatgtcc
     1741 aaaaatgacc gaatggtggg catcagccgc agaacactcg ttaaatcaac cgcgataggt
     1801 tctctggcgc tggctgcagg cggtttttct ttaccgttca ccctgcgcag tgcagcggca
     1861 acggtacaac aggccagcga aaaagtgatc tggggtgcct gttccgtcaa ctgtggtagc
     1921 cgctgtgcac ttcgtctaca tgttaaagat aatgaagtga cctgggtgga aactgacaat
     1981 accggcagcg atgagtacgg caaccatcag gtacgcgcct gtttgcgcgg tcgctccatc
     2041 cgccggcgta ttaatcatcc cgatcgcttg aattacccaa tgaaacgcgt gggtaaacgc
     2101 ggtgaaggca aattcgaacg gattagctgg gatgaagccc tggatactat cgccagtagc
     2161 ctgaaaaaaa ccgtcgaaca atatggcaat gaggctgtat atattcagta ctcttcgggg
     2221 attgttggcg gcaatatgac ccgctcttcg ccatcagtct cggcggtcaa acgcctgatg
     2281 aactgctacg gctgttcact caatcagtat ggctcctaca gcaccgagca aatttcctgt
     2341 gccatgccct acacctacgg cagtaatgat ggcaacagca ccacggatat tgaaaacagc
     2401 aagctggtcg tgatgtttgg taacaacccg gcagaaaccc gcatgagcgg cggtggcatc
     2461 acttatcttc ttgaaaaagc gcgcgagaaa tcgaacgcca aaatgattgt tatcgatccg
     2521 cgatataccg atacggctgc tggtcgtgaa gatgaatggc ttcctattcg cccgggcacc
     2581 gatgccgcgc tggttgcggg tattgcctgg gtattgatta acgaaaatct cgttgatcaa
     2641 ccttttctcg ataaatactg cgtcggctat gacgaaaaaa ccttacccgc agatgcacca
     2701 aaaaatggtc actataaagc ctatattctt ggtgaaggtg atgataatac agcgaaaacg
     2761 ccgcagtggg cttcgcaaat taccggtatc ccggtggacc gtatcatcaa actggcgcgt
     2821 gaaattggca cagcaaaacc cgcttatatc tgccagggct gggggccgca acgccaggca
     2881 aacggcgaac tgactgcacg cgctattgct atgttgccta ttttgacggg caatgtcggc
     2941 atcagcggcg gaaatagtgg cgcgcgtgaa tcgacctata ccattaccat agaacgcctg
     3001 ccggtgctgg ataatccggt caaaacgtca atctcctgct tcagctggac agatgctatc
     3061 gatcatggtc cgcaaatgac ggcaatccgc gacggcgtcc gcggcaaaga taaactggat
     3121 gtgcccatta agttcatctg gaactacgcg ggaaataccc tcgttaatca gcattctgac
     3181 atcaacaaaa cgcatgaaat tctgcaggac gaatcgaaat gcgaaatgat tgtggtcatc
     3241 gaaaacttta tgacctcatc ggcaaaatat gccgacattc tgctgccaga cctgatgacc
     3301 gttgagcagg aagatattat tcctaacgac tacgccggta acatgggata tctcattttc
     3361 ctccagcctg tcaccagcga aaaattcgaa cgcaaaccga tttactggat cctgagtgaa
     3421 gtcgcgaaac gtcttggacc tgacgtctat caaaagttca cagaaggtcg cacgcaggaa
     3481 caatggttac aacatctgta cgccaaaatg cttgccaaag atccggcgtt accgtcttac
     3541 gacgaactga aaaaaatggg tatctataag cgtaaagatc ccaatggcca ttttgtcgcc
     3601 tacaaagcat ttcgtgacga ccccgaggca aatccactta aaacgccttc cggtaagatt
     3661 gaaatttatt ccagcaggct ggcggaaatt gcccgtacct gggaactgga aaaagatgaa
     3721 gtgataagcc cattgccagt ttatgcctca acctttgaag gctggaactc ccctgaacgt
     3781 agaaccttcc cactgcaact gtttggtttc cattacaaat cccgtactca ctcgacctac
     3841 ggcaatattg atctcctgaa ggctgcctgc cgtcaggagg tgtggatcaa ccctatagat
     3901 gcgcagaaac gtgggattgc caacggcgat atggtgcggg tgtttaacca tcgtggcgaa
     3961 gttcggctac cagccaaagt aacaccacgt attctccctg gagttagcgc tatgggccag
     4021 ggagcctggc acgaggccaa tatgtctggc gataaaatcg accatggcgg ctgtgtgaat
     4081 acgctaacca ctctgcgccc ttcaccactg gcgaagggaa acccgcagca cactaatctg
     4141 gtcgagatcg aaaaaatata acccacgaca accataaatt ctggcatgac attttgtttg
     4201 aaaagcaata agtgagtaat gatgaaaatc cataccacag aggcgctcat gaaggctgaa
     4261 atcagccgta gaagtctggc acttggcagt cttgcgctgg caagcagtgc tttcattctg
     4321 ccattttccc aaatggtccg ggcggcagag gctccggtag aagagaaagc ggtctggagt
     4381 tcctgcaccg ttaactgcgg gagccgctgt ctgttacgtt tgcatgtgaa agatgacacc
     4441 gtgtactggg tggagtctga tacgacaggt gacgacgtct acggtaatca tcaggttcga
     4501 gcgtgtttac gcgggcgctc tatccgccga cggatgaatc atcctgatag gttgaaatat
     4561 cccatgaagc gcgtcggcaa gtgcggtgaa ggtaaatttg aacggataag ttgggacgaa
     4621 gccctggata ccatcagtga taatcttcgg cggatcctga aagattacgg caatgaggct
     4681 gtacatgtcc tgtacggaac aggcgtagat ggcggaaaca tcaccaactc aaacgtcccg
     4741 taccgtctga tgaactcttg cggtggtttt ctcagtcgct atggcagcta cagtactgca
     4801 cagatcagtg ccgcaatgag ttatatgttc ggtgccaatg atggcaacag cccggatgat
     4861 atcgccaata cgaaactggt cgttatgttc ggaaataacc cggcagaaac gcggatgagc
     4921 ggcggtggtg tcacttacta cgtcgagcaa gcccgcgaac gttcaaacgc acgcatgatc
     4981 gtcatcgatc cacgttataa cgacactgct gccgggcgtg aagatgaatg gctgcccatt
     5041 cgccctggca ccgatggcgc actggcctgt gcgattgcct gggtactgat tactgaaaac
     5101 atggtcgatc agccatttct cgacaaatat tgtgttggtt acgatgaaaa aacgctgccc
     5161 gccaacgcac cacgtaacgc gcattataaa gcctatattc tgggcgaagg gcctgacggc
     5221 atagctaaaa cgccggaatg ggcagcaaaa atcaccagca tcccggcaga aaaaattatc
     5281 cagttggcgc gagagatcgg ttcagcaaaa cctgcttata tttgtcaggg ttgggggcca
     5341 caacgacatt ccaacggcga gcaaacgtcc cgcgctattg ccatgctttc cgttctcacc
     5401 ggtaacgttg gcataaacgg cggcaactca ggtgtacgcg aaggtagctg ggatctgggg
     5461 gtagaatggt tcccgatgct tgagaatcct gttaaaacgc agatttccgt ctttacatgg
     5521 acagatgcca tcgaccatgg tacggaaatg accgcgaccc gtgatggtgt tcgtggaaaa
     5581 gaaaaactgg atgtccccat caagttttta tggtgctacg ccagtaacac attgatcaat
     5641 caacatggcg acatcaatca cacccatgag gtgcttcagg atgacagcaa gtgcgagatg
     5701 attgttggca ttgaccactt catgacggcc tcggctaagt attacgatat cctgttgccc
     5761 gacctgatgc caacagagca agaagacctt atctctcatg aatctgcagg gaatatgggc
     5821 tatgtgatcc tcgcccaacc cgcaacctca gcaaaatttg aacgcaaacc catctactgg
     5881 atgctgagtg aagtcgccaa acgcttagga ccagacgttt atcaaacctt tactgaaggt
     5941 cgcagtcagc atgaatggat caaatatctc catgcgaaaa cgaaggaacg taaccctgag
     6001 atgcccgact acgaggagat gaaaacgacc gggatcttta agaaaaaatg cccggaagaa
     6061 cactacgtcg ctttccgcgc attccgtgaa gatccacagg caaacccgtt gaaaacacct
     6121 tcggggaaaa tcgaaattta ttctgaacga ctggcgaaga ttgcagatac ctgggaattg
     6181 aaaaaagatg aaattattca tccccttcct gcgtataccc caggttttga tggctgggac
     6241 gatcccctgc ggaaaaccta tccactgcag ttaacgggct tccactacaa agcgcgtacc
     6301 cactccagct acggcaatat tgatgtgtta cagcaggcct gcccacaaga ggtgtggatc
     6361 aaccccattg atgctcaggc acgcggtatc cgtcatggcg ataccgtgcg ggtatttaac
     6421 aataatggag aaatgctgat tgccgcaaaa gtgactccgc gtattctgcc aagattttaa
     6481 agatcttggc ccggaagtca gtttccgccg tatttatgaa tatgctggcg gcgactggca
     6541 ggaagataat ggcatctggc accagaacgt gttcgcttat tatctctcca tctcctgtaa
     6601 ccattgcgat gaccccgcat gtacaaaagt ctgccccagc ggcgcaatgc ataagcgtga
     6661 agatggcttt gtggtggttg atgaagatgt ttgtatcggc tgccgctact gccacatggc
     6721 ttgtccgtac ggcgcaccac agtacaatgc tgaaaaaggg cacatgacga attgcgatgg
     6781 ttgttattcg cgcgtcgccg aggggaaaca acccatatgc atcgaatcct gcccgctgcg
     6841 tgcacttgag ttcggtccaa ttgaagagct gcgccagaag cacggcactc tggctgccgt
     6901 cgcgccactg ccgcgcgcgc atttcacaaa acccaatatc gttatcaaac ctaacgccaa
     6961 cagccgcccg accggcgata ccactggtta tctggctaat ccggaggaag tgtaaaatgg
     7021 gaaatggatg gcatgaatgg ccactggtta tctttaccgt attgggtcaa tgcgtagtag
     7081 gcgcgctgat tgttagcgga attggctggt tcgccgccaa aaatgacgca gaccgtcagc
     7141 gtattgtccg tggcatgttt ttcctctggc tgttgatggg catcgggttt attgcctctg
     7201 tcatgcacct gggatcgcca ctgcgagcgt ttaactcgct gaatcgaatc ggagcttctg
     7261 gtctgagtaa cgagattgct gccggttcca tattttttgc cgttggtgga ctatggtggc
     7321 tggtggcggt catcggtaaa atgccgcaag cgttggggaa actctggtta cttgtcagca
     7381 tggcgctcgg cgtcattttc gtctggatga tgacctgcgt gtatcaaatc gacaccgtgc
     7441 caacctggca taacggttac actacgctgg ctttcttcct gacggtattg ttgagcgatc
     7501 caatacttgc tgccgcaatt ctgcgggcag ctcgcgttac atttaatacc acaccatttg
     7561 ccatcattag cgttctggcg ctgatcgctt gtgccggggt gattgtgctg caaggtttgt
     7621 ctctggcgtc tattcactca tccgtgcaac aagccagcgc actggtacca gattacgcct
     7681 ccttacaggt ctggcgtgtg gtattgttat gcgcaagtct tggatgctgg ctttgcccgc
     7741 tcattcgtcg ccgtgaacct cacgttgccg gacttattct ggggctaatc ctcatacttg
     7801 gcggtgagat gatcgggcgt gtgctctttt atggcctgca catgacagta ggaatggcta
     7861 ttgcaggtta acaaattggt gcggggcaac ccgcacattt caggatgtta ggaatgaccc
     7921 atttttcaca gcaagataat ttttctgtcg cggcgcgcgt gttgggcgcg ctgttttatt
     7981 acgctccaga gagtgcggaa gccgcacctc tggttgcggt actcaccagt gacggctggg
     8041 aaactcagtg gcctctacca gaagcgtcat tagcgccgct ggtgacggct tttcagacac
     8101 agtgtgaaga gactcacgcc caggcctggc agcgtttgtt tgtcggcccg tgggcactgc
     8161 cgtctccgcc gtgggggtcg gtctggctgg atcgcgaatc tgtgctgttt ggcgattcaa
     8221 cattggcact tcgtcagtgg atgcgcgaga aaggcattca gtttgaaatg aagcaatacg
     8281 aaccggaaga tcattttggt tcactgctgt tgatggctgc gtggttggcg gagaatggtc
     8341 gccagacaga atgcgaagaa ttgctggcat ggcacctttt tccgtggtca acacgttttc
     8401 ttgatgtttt tatcgaaaaa gcagaacacc ctttctaccg tgcactgggt gaactgtctc
     8461 gcttaacgct ggcgcaatgg caatcacaac tgttaattcc tgtcgcggtt aaaccgctgt
     8521 ttcgatagga tcaccgtaat attgccggat ggtgacgatt acgcgcaatc cggcaataat
     8581 aggttacagt gtcacgtttt tttatctctt aaagcacgca ctgcttttgc ggctggcctc
     8641 ttttgccgca aaatagtcgc ccgtgtttca ttgcccattt ctgctcatgc atcatctaca
     8701 catctatccg gatctgcgca ctatgttccg ccgtctgctt atcgcaacag tcgtcggtat
     8761 tctcgcggcc tttgccgttg ccgggtttcg tcatgcgatg ctgctactgg agtggttgtt
     8821 cctcaataat gactccggca gtctggtcaa tgcagcgaca aacctttccc cctggcgacg
     8881 gttgctaact ccggcgctcg gcggactggc ggcgggtttg ttgctgatgg gctggcagaa
     8941 atttacccaa caacgccctc atgcgccgac cgattacatg gaagcgttgc aaaccgatgg
     9001 acagttcgat tacgcagcaa gcctggttaa atcgcttgcc tcgctgctgg tagtaaccag
     9061 cggcagtgca attggtcgcg aaggtgcgat gattctttta gctgcccttg ccgcctcctg
     9121 ttttgcccaa cgttttacgc cacgccagga gtggaaatta tggatcgcct gtggggccgc
     9181 ggcgggaatg gctgcggcct atcgtgcccc gcttgctggc agtttattta tagccgaagt
     9241 gctgtttggc actatgatgt tggcctctct cggcccggtg attatttccg ccgtcgtggc
     9301 attgctggtt agcaatctga ttaatcatag cgacgcgtta ctctacaacg tacaactctc
     9361 agtgacggtt caggctcgtg actatgcgct gattatcagt acaggtgtgc tggcaggtct
     9421 gtgcggacca ctgttgttaa cgttaatgaa cgcctgtcat cgtggatttg tgagtctcaa
     9481 acttgcgccg ccctggcaac tggcactagg cggggtgatc gtgggtctgc tttccctgtt
     9541 cacacctgca gtgtggggca acggctatag caccgtacaa tcctttttaa ccgccccacc
     9601 actgttaatg atcattgccg ggatcttcct ttgtaaactg tgtgccgtgc tggcgagtag
     9661 cggttccggc gcacccggtg gtgtctttac accgacgcta tttatcggtc ttgccattgg
     9721 catgttgtat ggtcgtagcc tgggattatg gttccctgat ggcgaagaaa ttacgctttt
     9781 actcggattg accgagatgg cgacactgtt ggcggcaacc acgcacgcgc cgattatgtc
     9841 gacgttgatg atatgtgaaa tgaccgggga gtatcagcta ctccccggtt tattgattgc
     9901 ctgcgtcatt gcgtcggtaa tttcgcggac gttacaccgt gactctatct accgccagca
     9961 cactgcgcag catagctaag cggatgtatt gccccagttc tcgctgttcg gcgcgcggca
    10021 gataaggcag ttcaccaatg agcggtgccg gaagtttttt acccagcaca tcaatgattt
    10081 ccgcataatg cgccagtcct gggttgattc ggttagccac ccagccaatg agcggcagcc
    10141 cgtcgttggc aatcgcctga gctgttagca gtgcatggtt aatgcaacct tcctgaatac
    10201 cgacaaccat caacaccggc aactgttcct gcaccaccca ttcagagagt ggacgcaaat
    10261 cattcatcag actgcgccag ccgccagtcc cttctaccac gacatgatcg actttatcgg
    10321 tcaggtttgc caggccgttt gaaatgaggg tgtaattgat tgggcaactg tgcgccacgc
    10381 tactttcttc ttcgcttaac gcgataggat taactgcttc ataaggcagt tcgatggttg
    10441 aaacactctg caacaccagg gcatctttat tacgcagccc ttcgggtgtc tctttgctcc
    10501 ccttcgctac gggtttatat cccgcaactg tttttccctg ggaggctaac gcttgtagca
    10561 atgcgcggga aaccaccgtt ttccctacag aagtgtctgt accggtaata aagaaacgct
    10621 tcagcatcac taactccacc gttatgcttc acaaatataa accaggaaaa taattaacct
    10681 tgaaagtcta agttatgctt tcctggccca aattgagata gcgcaaattt tggtagaaca
    10741 gttaaaaaat gttaaccctg caacagacga atcaacaaag aaccgttata catcgcgtct
    10801 tttaccagcg cagcgcctgc catcgtgccc tggttagaaa actgagtact ctcaacgcta
    10861 atgtgctgac tatacgtagg aagggcctgc tgacgtatgc tgtccgagat gacagggaag
    10921 aggatatctg ccgctttact taacggtgag ccaatcagta ttttttgtgg gttaaataaa
    10981 ttcaccatga tggcaagaat gcgcccgaca tgcgcgccca ccccggtaat gatgtctttt
    11041 gccagtagat cgccgcgcaa tgccgcctga cacaatgagt ccacggttaa cggttgccca
    11101 tgtaacatcg agctcatgga ttgattgaga cgcagctgtg ccagctcaag aatactgtcc
    11161 acactggcga tggtttcgag gcagccgtgg ttcccgcaat aacagcgttt accatatggg
    11221 tcgacctgtg tgtggcctat ttccacgaga ctactgctgc ctgcgtgtag cagatgacca
    11281 tcggtaatga cgcccgcccc cacgttgtga tcgataacca cctgaatcac atcgcgcgcc
    11341 ccgcgtgagg caccaaacaa ggcctctgcc atcgtccatg cgctgatatc atgctgaata
    11401 taaaccggta cgccggtatg ctgctccagc gcctcgccga gcggcatctc ttttacatcc
    11461 tcgtagaacg gcatgcgatg tacaatacca ttttccgtat caataattcc cggcagggtt
    11521 atggcaatcg aagttagacg ctcaagtttt ttctggtggc ggataaaaaa ctgatcgata
    11581 tgggaaatga tacgatccag caatggcaag tcatctttta acgccagttc ctgcgactct
    11641 tccaccacca gtttgctgct cagatcgcgc agagcaagga aaatctcccc gcgactaatg
    11701 cgcagagaaa gatagtgcca ggcttcagtt tcaaccacca gccccaccgc cggacggcca
    11761 cggttccccg cttctttgat ttccagctct tgcaccaagt gtgcttcgag catctcacgg
    11821 acaattttag tgatactggc aggagccagc tgcgccagac gggaaagatc gatacgcgag
    11881 actggaccaa gctgatcaat caggcgataa accgcgcccg cgttggtctg ctttatttga
    11941 tcaatgtgcc caggctggtt ttcagcaacc accgcatact ccctatattt tcgcgctccg
    12001 aaataatctg taggctatgg tgaagcactt caatacgtgt cgtcaaattt ttacttagac
    12061 atgtgattaa tagcacattt ttcgggcttt ttcgctgaaa tttccctcac ctgagagcat
    12121 tcagcagatg aatacgaaag ttacgcgaag ctggactttg ttcatgatgt ttcggccaga
    12181 ccaaccacat ttcagaaacc gcatcctctt cagcaatcgg cacccagcgc atttcgttga
    12241 gctgaacacg tttaaatgaa gcaggcaaaa ttgaaacacc cagaccggcg gaaaccagac
    12301 cgatgatggt cattgcctcg cccacctcct gagtgatgac gggcgtcaaa tggtaacgtc
    12361 gcatcagccc gagaatatcg tcatacagcc ctgtcccgac gtgcggatca aaaaagacga
    12421 agggttcttt cgccagttca gccaacgtta cattcgggtt atttgccagg ggatgatcgt
    12481 gcgggatcat cgccataagc ggttcatgga cgatgactgc gtgttcaagc gtctccggta
    12541 acgctgtgtt acgcagcaat cccatatcca gcgttccttc aatgagcgga gcgatttgct
    12601 cacgagtgtt catttcgcgg gtttgtaaat ggacaccggg ataatcacgg cgaaacagcg
    12661 ataacgtatc ggacaccgcc cgaataaaag gagcggacga agtaaaacca atgcgcaact
    12721 cccccgcttc accctgatgc agtctttcag cgcgagcggc agcgtcatct accatagaca
    12781 ggatttgccg actatctgca agaaactgtt ttcctgctgc cgtcagcaat acactgcgat
    12841 tagttcgtgc cagcagtcgg gcaccaattt gttgctccag tgcctgaatc tgctgactta
    12901 gcggtggttg cgaaatattc aggcgggcag cggcgcgccc gaaatgcagc tcttccgcaa
    12961 cagcaacaaa gtaacgcaga tgacgaagtt caatattcat atttaaaaca tcttatttga
    13021 gattattaat atattagaca gagcaattcg attttcctaa cctatgtata agcctgatcc
    13081 acaggcatat ttagcaagga tttcaagtga gccgtactac aactgttgat ggcgctccgg
    13141 caagcgacac tgacaagcaa agcatttctc agccaaatca atttattaaa cgcggtacgc
    13201 cgcaatttat gcgcgtcacc ctggcgctgt tctctgccgg actggcaacc tttgcactcc
    13261 tctattgtgt gcagcctatc cttccggtgc tttcgcagga gtttggctta acccccgcga
    13321 acagtagtat ttcactgtcc atttccacgg cgatgttggc tattggtttg ctgtttactg
    13381 gccccctatc cgatgccatt ggtcgcaaac cagtgatggt cacggcgcta ctgttggcct
    13441 ccatttgtac gttatttcga caatgatgac cagctggcac ggcattttga ttatgcgcgc
    13501 cttgattggg ctttcgttaa gtggcgtggc agctgttggc atgacttatc ttagcgagga
    13561 aatccacccc agtttcgtgg ccttttcgat ggggttgtat atcagcggca actcaattgg
    13621 cggcatgagc ggacgcttaa ttagtggtgt cttcacggac tttttcaact ggcgaattgc
    13681 tctggcggca atcggttgtt tcgcgctagc ctcggcgttg atgttctgga aaatccttcc
    13741 ggaatcacgc cattttcgcc cgacttcgct gcgacctaag acgttgttta tcaactttcg
    13801 tctgcactgg cgtgaccggg gattaccgtt attgttcgca gaaggctttt tgctgatggg
    13861 gtcgttcgtc acgctgttta attacatcgg ctatcggttg atgctttccc cctggcatgt
    13921 cagtcaggcc gtggttggct tattatcgct ggcttatttg accggtacac ggagctcacc
    13981 caaagccgga accatgacca cccgctacgg gcgcggtccg gtgatgttgt tttcgacggg
    14041 ggttatgctg tttggtttac tgatgacctt attcagctcg ctgtggctga tctttgccgg
    14101 aatgttactc ttctcagcag gattcttcgc agcccactca gttgccagca gctggatcgg
    14161 cccccgcgca aaacgcgcta aaggccaggc ctcctcgctg tatctgttca gttactatct
    14221 ggggtcgagt attgccggga cgctgggtgg tgttttctgg cataactatg gctggaacgg
    14281 cgtcggcgca tttattgctc tgatgctggt cattgctctg ctggtcagga cgcgtttgca
    14341 tcgtcgtctg cacgcctgaa aaataagccc ggactgcggt aactacacgt ccggacttat
    14401 tgcttgctca aaccaacgtt aatagccatc ctaaaataga cgaagcgcca gccaattccc
    14461 gcagtgcgtc tagcgtcatc aggattataa gtacccaaat aaacggattc attttgctgt
    14521 gtgtcattta ttactgatgc gcagttattc taccgctttg taagtagtaa aatagttaac
    14581 ccgatcaaga ctactattat tggtagctaa atttccctta agtcacaata cgttattatc
    14641 aatgctgtaa tttattcagc gtttgtacat atcgttacac gctgaaacca accactcacg
    14701 gaagtctgcc attcccaggg atatagttat ttcaacggcc ccgcagtggg gttaaatgaa
    14761 aaaacaaatt gagggtatga caatgaaaaa agtattagct ctggttgttg ccgctgctat
    14821 gggtctgtct tctgccgcct ttgctgcaga gactgcgacg accaccaaag cagcgccggc
    14881 gaaaacgaca catcataaaa aacagcataa agcagcacct gcccagaaag cgcaggcagc
    14941 taaaaagcat cataaaaata cgaaagctga acagaaagcc cctgaacaaa aagcgcaggc
    15001 agcgaagaaa cacgccggga aacacagtca tcagcaaccg gcaaaacctg ctgcacaacc
    15061 cgcagcgtaa gttttcaaca gtaatgctgg cgcgccccct cgcgcctgaa aattacggtg
    15121 ctaagcgggt aacgtttagc accgccttta gcggagggta gtatggtggg ccgttatcgc
    15181 tttgagttca ttcttatcat ccttatttta tgcgcactga ttgccgcccg tttttatctt
    15241 tcctgactgt agttatctga ttttactccc actttcatcc cgtcccgtct atagtattta
    15301 tgagggtttg cttttaataa tcataattac ccaccagagt gtgatatgcg tacaaccatt
    15361 gctgtagtgt tgggtgcaat tagtttgacg tctgcttttg tgtttgcaga taaaccagac
    15421 gttgccaaat cggcaaacga tgaggtcagc accctgtttt ttggtcatga tgatcgtgtg
    15481 ccagtgaatg acacggccca atcaccgtgg gatgcggttg ggcaactgga aacggccagc
    15541 ggcaatttat gtacggcgac gctgattgca cccaatctgg cattaacggc aggacactgt
    15601 ttattgacac ctccaaaggg taaagccgat aaagcagtgg cgctgcgttt tgtgtcaaat
    15661 aaaggtcttt ggcgctatga gatccacgac atagaaggcc gcgttgatcc gacactggga
    15721 aagcggttaa aagcagatgg ggatggttgg attgtacctc ccgcagccgc gccgtgggac
    15781 ttcggattga ttgtgctacg taatccccct tctggcatta caccgttgcc gttatttgag
    15841 ggagataaag ccgcgcttac tgccgcatta aaatcggctg gccgtaaagt aactcaggcg
    15901 ggataccctg aagatcatct cgatacgttg tacagtcatc aaaactgtga agtgactggc
    15961 tgggcgcaaa cgtcggtgat gtcacatcag tgcgatacct tgccgggtga cagcggttcg
    16021 cctctgatgt tgcataccaa tgacggctgg caattaattg gggtgcaaag ttcggctcct
    16081 gccgcgaaag atcgctggcg cgccgataac cgggccattt ctgttaccgg ttttcgcgac
    16141 aagctggatc aactgtcgca aaaataatgt tcaaacgctg cccgactgtg cgggcagcgt
    16201 gttcatcagg caagtttcac catgatcatt ccagccaaca gcaagaccag gccaatccag
    16261 cctttacgat ttaaccgttg accaaacaag atccaacctg cggctaacgt ggcggcaata
    16321 ccaaacccgc cccacaatgc ataagcgaca gacaagtcga tccctttaac ggcctgagaa
    16381 agcgcactaa aggcagccag caccgccgcc agggagagca agccaaatat tttgcgacga
    16441 aagccgtcag aaaatttcaa aaagacgtta gcaacgattt ccagcacgat tgccaatgcc
    16501 agccaggcgg cgtgaaccca ttcaaactgc gccatggttc acctccagtt caggtttacg
    16561 cgctttacgg gtacctgatt ttatcaacac aatcccggcg accagggtgg ttaacccggc
    16621 aattttcatc agcgataaac tttcgtcgaa taacaaaacg ctaaacaagg taataaataa
    16681 aataccgata ccttcccaca gcgcataagc tacgcctaag gcgatctttt taacggcgaa
    16741 agagagaaat atatacgaca gagaaatcat caccagcatt aaaataaagc cgccatttcc
    16801 ctcactgacg ctcgcccatt tcattgacag cgtaccggta atttctgtag caatagccag
    16861 gcctaataaa atccaataaa tatacattgt ccttctcctg caagagaatt attttaattt
    16921 tcgcttaatt cagcgaaatc aaagtaaagt ggtcaagccc cgcgcatagg gcaagcttag
    16981 gcagaagaaa ggactaaagc gcgttgcgcc agtgctgctc acctacgagc aagatagtgg
    17041 atgaggtacg aagatgggta aatgttgaaa ataaggtcct gaacaaattg tccataatat
    17101 tacaattatc cgcagtgttg cttctcgtca tcgcggatga taattgtcct cggtagttga
    17161 acacgcctga tttgtatcat agcttaagaa ttaactcaaa atattttcac ttctttacct
    17221 gagcggtttg attttcgtta tgatgacgga gcgaaaaaga cattattatt agcaaaggaa
    17281 gaaaaaacgg ggacaagcat ggcaaagccg atcatcacgc tcaatggcct aaaaatcgtc
    17341 attatgttgg gaatgctggt cattattctc tgcggtatcc gttttgccgc cgagatcatc
    17401 gtgccgttta ttctcgcatt atttattgct gttattctta acccgctggt gcaacacatg
    17461 gtccgctggc gagtgccgcg tgtactggcg gtgtcgattt tgatgaccat catcgtgatg
    17521 gcgatggtgt tgctattagc ttatctgggt tccgcgctca acgagttgac gcggacgtta
    17581 ccgcaatatc gcaactctat tatgacgccg ctgcaagctc ttgagccgtt gttgcaacgc
    17641 gtagggattg acgtctcagt tgaccagctg gcgcattaca ttgatccgaa cgcagcgatg
    17701 acgttgctca ccaacttatt gacgcagtta tctaatgcca tgtcatcaat atttttattg
    17761 ctgctgacgg tgctgtttat gctgctcgaa gtgccacaat tgcccggaaa atttcagcaa
    17821 atgatggcgc gtccggttga agggatggcg gcgattcaac gtgcaattga cagtgtttct
    17881 cattatctgg tgctgaaaac agccatcagc atcatcaccg gcctggtcgc ctgggcgatg
    17941 ctcgccgcac tcgatgttcg cttcgctttt gtctggggat tgctggcctt tgcgcttaat
    18001 tacatcccta atattggttc agttctcgcg gcaatccccc ctatcgctca ggtactggtg
    18061 tttaatggct tctacgaagc gttgctggtg ctggcgggat atctgctgat taatctggtc
    18121 ttcggcaata ttctggagcc gcgcatcatg ggacgtgggc tggggctttc cacattggtg
    18181 gtatttttgt cgttgatttt ttggggatgg ttgttaggac cggtgggtat gctgctttcc
    18241 gtgccgttaa caattattgt caaaattgcg cttgaacaaa cagcgggagg tcaaagcatc
    18301 gccgttctgt taagcgatct caataaagag tgacggcctc cgcagaggcc gtcagggtta
    18361 cagagctttc aggattgcat ccacgctggc tttggcgtca ccaaacagca tgtgggtgtt
    18421 ttccttgaag aacagcgggt tttgcacacc agcatagcca gtgttcatcg aacgtttaaa
    18481 gacaatcacg ttctgcgctt tccacacttc cagcacaggc ataccagcaa taggactttt
    18541 cggatcatcc tgcgccgccg ggttaaccgt atcgttagca ccaatcacca gtacggtatc
    18601 ggtatcagca aagtcatcgt tgatctcgtc catttccagc acgatgtcat acggtacttt
    18661 tgcttcagcc agcaatacgt tcatatgtcc aggcaaacgc cccgcaaccg ggtggatacc
    18721 gaaacgcacg ttgataccac gagcgcgcag tttctcggta atttcagcga caggatattg
    18781 cgcctgcgcg actgccatgc cgtaccccgg agtaatgatc actgaatggg agtttttcag
    18841 cagttccgct gtctcttctg cggtgatttc gcggtgctcg cccacttcct gatcatcgcc
    18901 agtagaagag ccgtcggtgc cgaaaccacc cgcaataacg ctgataaagg aacggttcat
    18961 cgccttacac ataatgtaag aaaggatagc ccccgaagaa ccgaccagcg caccggtcac
    19021 aatcagcagg tcgttgctga gcataaagcc cgcagccgca gccgcccagc cggagtacga
    19081 gttcagcatc gacaccacca ctggcatatc tgcaccaccg atggaggcga ctaaatgcca
    19141 gccgaatacc agcgcaatgg cggtcattat tagcaatgcc agcacttgca ggccgacgct
    19201 gtccgtgcga acaaatacaa tcagcagcag gaaggaaacg accagagccg ccaggttcat
    19261 tttgtgacgg tttggcagca tcaacggttt agacgaaatc ttgccacaca gtttgccgaa
    19321 cgccaccacc gaacccgtga acgttaccgc cccgatgaag ataccgagga acacttccgt
    19381 caggtgaata ttgaccagaa tcggtgccat tcccgcgtca tgatgcagat agctgttaaa
    19441 gccaaccagc actgccgcca gacccacgaa gctgtgcagg atcgccacca gttctggcat
    19501 ttcggtcatt tcaactttct tcgccagacg gataccaatt gcccctccaa tgaccatcgc
    19561 cagcaagatc cagccaacat tacccgtatc cggtccaaaa atggttgcga ttaacgcaat
    19621 cgccatccct gcgataccga agttgttacc ctggcgagac gtttcatgtt tcgaaagacc
    19681 ggccagactg aagataaaca ggatcgcggc aacaatgtat gcagctgtaa ctaatcctcc
    19741 agacatatgt taccccttaa tttttgcgga acattttcag catgcgctga gtcacggtga
    19801 agccaccgaa aatattaatg ctggctataa gcaccgcgat aaaactaagg aagctaaccc
    19861 agccgccctg gccaatctgc aacagtgctc cgacaacaat aatccctgaa atcgcgttgg
    19921 tgaccgacat caacggtgta tgcagcgcgt gcgatacatt ccacaccacg taataaccga
    19981 caacgcaggc cagcgcgaaa acggtgaagt gcccaagaaa ctctttcggc gcaacgcttg
    20041 ccagccaacc gaaaaggatg attgccagcg ccatcaacgc gtatttacgc cacggtgagc
    20101 aggcacattt ttcctcagtt ttcacttccg gtgccgcttt ttgtgccgcc tgcggctgag
    20161 ctgatacctg aatcggcggt gccggccagg taatttcgcc cgcacggatc acggtcacgc
    20221 ggcgaatcac cacatcatca aaatcaacag tgatattgcc gtctttctct ttgcacaaca
    20281 gtttcagcag attaacgagg ttagtaccgt aaagctgcga ggattgcgtc ggcagacggc
    20341 ccggaagatc ggtataacca atcactttga caccattttc cgtagtgaag atttcacccg
    20401 gcacggtgta ttcacagttg ccaccgtttt gggctgccag gtcgacaatc acactgcccg
    20461 tcttcatgga gtcaaccatt tcacgggtaa ttagcttcgg cgctggtttg cctggaataa
    20521 gcgcggtggt gacaatgata tcgacctctt ttgcctgggc ggcaaagagt tccatttccg
    20581 ctttaatgaa cgcgtccgac atcactttgg catagccatc gccgctgccc gcttcctctt
    20641 taaaatccag ctcgaggaat tccgcgccca tactttgaac ttgttctttc acttccggac
    20701 gggtgtcgaa tgcacgcaca atcgcgccga gactgtttgc tgcgccaatg gcggccagac
    20761 ctgcaacacc cgcaccaatc accatcactt ttgccggtgg cactttcccg gccgcagtaa
    20821 tttgcccggt aaagaagcgc ccaaattcat gtgccgcttc aacaatggcg cgataaccgg
    20881 cgatgttcgc catcgagctt agtgcgtcca gcgattgtgc gcgtgagata cgcggcacag
    20941 aatccatcgc catcacggtc acgttacgtt ccgcaagttt ttgcattaat tccggattct
    21001 gcgcaggcca gataaaactc accagcgttg tcccaggatt cagtaacgca atttcatcat
    21061 ctaacggcgc attgaccttc agaatgatct ctgactgcca gacgctattc ccttctacaa
    21121 tttcagcgcc cgcttgcaca aacgctttat cgtcaaaact tgccagttga cccgcgccgc
    21181 tctctaccgc gacggtaaaa cccagtttca gcagctgttc cactgttttt ggcgttgctg
    21241 caacacgggt ttcattggtt aaccgttctc ttggtatgcc aattcgcatg atattccctt
    21301 ccatcggttt tattgatgat ggtttgcctg tgtcaggagc cacacaagcc gctcatgtac
    21361 gagctaaatg ttactccgtt aaaataaatt agtaacaaac gccctataac gtactgaaaa
    21421 ttatgcctgt gatctagcgc caaaaatcag tatttcggcg tgaactcgca aaatattaac
    21481 gattcagccg tgatagtggg ataaacacct tagaacgccg gataaagact gataattgtc
    21541 ttcgacggtc gggtaaaacg agacatcgcc ccggcacgat tcactactta acattaaatt
    21601 aacttataca attcagttgc ttcagtagta atgatgctga tacggctgtt ttttaagcat
    21661 agacggtcat ttgagcagga ttaaaattgg cttaaggaat gtgatatgaa aaatgacgca
    21721 gacagttaca ccgtttaaat gcaataatca gccacgtttc tcgttaataa caataccagt
    21781 acctggtttg cgcaaggcga aggattattt ttatgaagct taagaacacc ctcctggcgt
    21841 cggcactgct ttctgctacg gcattctccg ttaacgcagc aacagaactg acaccggagc
    21901 aagcggcagc ggttaaacct tttgaccgtg tagtggttac cggtcgtttt aatgctattg
    21961 gcgaagcggt gaaagccgtt tctcgtcgcg cagataaaga aggtgccgcc tctttttatg
    22021 ttgtcgacac ttctgatttt ggtaacagcg gtaactggcg tgtggtcgct gacctctata
    22081 aagccgatgc tgaaaaagca gaagaaacaa gtaatcgcgt aattaacggt gttgtcgaac
    22141 tgccgaaaga tcaggctgtt ctgattgaac cgtttgacac ggtcaccgtc cagggcttct
    22201 atcgtagcca gccagaagtc aatgatgcca tcaccaaagc ggcaaaagcg aaaggtgcct
    22261 actctttcta catcgttcgt caaatcgatg ccaaccaggg cggcaaccag cgtattactg
    22321 cattcatcta taaaaaagat gctaagaaac gtatcgtcca gagcccggat gtgatcccgg
    22381 cagattccga agcaggacgt gcagctctgg ctgccggtgg cgaagccgcg aagaaagttg
    22441 agatcccagg tgttgcgact accgcatcac caagttctga agtcggtcgt ttctttgaaa
    22501 cccagtcatc aaaaggcggg cgttacaccg tcacgctccc ggatggcact aaagtcgaag
    22561 aactgaacaa agcgaccgca gcgatgatgg tcccgttcga tagcatcaaa ttctctggca
    22621 actacggcaa catgaccgaa gtctcctatc aggttgcgaa acgtgccgcg aagaaaggtg
    22681 ctaagtatta ccacatcacc cgccagtggc aggaacgtgg taataacctg accgtcagcg
    22741 cagatctgta taaataacta ttcagttact cctataaggc ggcttgatgc cgcctttcgc
    22801 atttttagtc acaaatttcc ccgcgaccat tgcatgcaga cacatctctt cgtaaaatcc
    22861 cgcgcttcag tggcaaactc catttttatg cgttttgccc taatatttat tcttcttatc
    22921 acgttttaat cactggatat cgatggaaaa gaaactggga ctgagcgcac tcaccgcgct
    22981 ggtattaagc tcaatgctgg gcgcgggtgt tttcagtctg ccgcaaaata tggcggcagt
    23041 tgccagcccg gcagcactgc tcatcggctg gggtattact ggcgctggca ttttattgct
    23101 ggcctttgcc atgctgatcc tcacgcgcat tcgtcccgaa cttgacggcg gtatctttac
    23161 ctatgcccgc gaagggtttg gcgagctaat cggcttttgt tccgcatggg gatactggct
    23221 gtgcgcagtc atcgccaacg tctcctatct ggtgatcgtt ttttccgcgt taagcttttt
    23281 tacggacacg ccggaattgc gcctgttcgg cgatggtaat acctggcaat cgatcgtcgg
    23341 tgcatcggct ttattgtgga ttgttcactt tttgatcctg cgcggggtgc aaaccgctgc
    23401 cagcattaac ctggtggcga cactggcaaa attgttgccg ctgggtctgt ttgttgtgct
    23461 ggcgatgatg atgttcaaac tggatacctt caagctcgac ttcaccggac ttgtacttgg
    23521 cgtacccgtt tgggaacagg tgaaaaacac catgctgatc accctgtggg ttttcattgg
    23581 tgtggaaggt gccgtggttg tttctgcgcg tgcgcgtaat aaacgtgatg ttggcaaagc
    23641 gacactgctg gcggttctct ccgctctggg cgtttacttg ctggtaacgc tgctttcgct
    23701 gggtgtggtg gcacgtcctg aactggctga aattcgtaac ccgtcaatgg ccggtctgat
    23761 ggtggaaatg atgggaccat ggggcgaaat catcatcgct gccagtttga tcgtttccgt
    23821 ttgcggcgcg tacttaagct ggaccatcat ggcggcagaa gttccgttcc tggctgccac
    23881 tcataaagca ttcccacgca tttttgcgcg ccagaacgca caagctgcgc catccgcctc
    23941 actgtggttg accaacatct gcgtgcaaat ttgtctggta ctcatctggc tgaccggttc
    24001 cgattacaac acgttgctga ccatcgcctc agaaatgatt ctggtgccct atttcctggt
    24061 cggcgcgttc ttgctgaaaa tcgcaacccg tccactgcat aaagcggtag gtgtcggtgc
    24121 ctgcatttat ggcttatggt tattgtacgc ctctggtcca atgcacttgc tgttatccgt
    24181 tgttctgtat gcgccggggc tgctggtttt cctgtatgcg cgcaaaacgc atacacatga
    24241 taatgtactg aaccgtcagg aaatggtgct gattggcatg ctgttaattg cctcagttcc
    24301 ggcgacctgg atgctggtgg gataacgttc atcccatcgt tggatagcaa aggagataac
    24361 gatgggtaaa gcccagccct tgccaatatt aattactggc ggaggtcgtc gcatcggcct
    24421 cgccctcgcc tggcatttca ttaatcaaaa gcaaccggtg attgtcagct atcggacgca
    24481 ctatccagcc attgatggac tgcttaaggc aggtgcgcag tgtattcagg ctgatttttc
    24541 gaccaacgac ggtgtgatgg cgtttgccga tgaagtacta aaaagcaccc atggtctgcg
    24601 tgctattttg cataacgcca gtgcgtggat ggcggaaaaa ccgggtgcgc cactggccga
    24661 cgtactggct tgcatgatgc agatccacgt taatacccca tacctgctca accatgcgct
    24721 ggaaagatta ctgcgtgggc acggacacgc cgccagcgat atcattcact ttaccgatta
    24781 tgtggtggag cgcggtagcg acaagcatat tgcgtatgct gcaagcaaag cggcactgga
    24841 taatatgacc cgctcgtttg cccgcaagct ggcaccggaa gtgaaagtga attctattgc
    24901 tccatcgctg atcctgttta atgaacatga tgatgccgaa tatcgacaac aggcgctgaa
    24961 taaatcactg atgaaaaccg cgcctggcga gaaagaagtg atcgacctgg tcgattactt
    25021 acttaccagt tgctttgtca ccggacgcag tttcccactt gatggcggtc gtcatctgcg
    25081 ttaatgcagc tttatccagc atataatcaa cacccatgcg cttatccccc aacacgcaac
    25141 agaaccaaca aaagcggcgg gcaagcgcat cattccggtg aaataccaca gcgacaccag
    25201 gtaaacaaaa tagggaataa tcgaccacat actaaaaatg atggttgcgc gtaaggcttc
    25261 aatgccgcgt tcgctggcaa caatataatg cgcgataagc gcaaaggtcg ggaaaagtgg
    25321 aatcagcccg gcgatataat aatttttcgt ttttgctaaa acaccaatca acagcactac
    25381 cagcgcaccg agcgcggctt tgattaccag ccccattttt taccttaaca cttccataac
    25441 aagtcatcag tagaatacct gatgaaaact tgtttagaaa cgattgatag taagtaaaaa
    25501 cagcgcggtg tattgtgacg tttttatatc taccgtgaat gttatgaaca ctatcgtatt
    25561 tgtggaagat gatgcggaag tcggttcact gattgccgcg tacctggcaa aacatgatat
    25621 gcaggttacc gtagagccgc gcggcgacca ggccgaagaa accattttgc gagaaaatcc
    25681 ggatttggtg ttactcgaca tcatgctacc aggcaaggac ggcatgacca tttgtcgtga
    25741 tttacgcgca aagtggtctg gaccgattgt tcttctaacc tctctcgata gcgatatgaa
    25801 ccacatcctg gcactggaaa tgggtgcctg cgactatatt ctcaaaacga tgccccctgc
    25861 tgttttgcta gcgcgtttac gtttgcattt gcgtcagaat gagcaagcca cactgaccaa
    25921 aggtcttcag gaaacgtctc tgacgtctct gactccctac aaagccctgc atttcggcac
    25981 gttgaccatc gatcccatca accgcgtagt caccctggct aacactgaaa tctcgctctc
    26041 gacagctgat ttcgaattat tgtgggaatt agctacccat gccgggcaaa tcatggaccg
    26101 cgatgcattg ctgaaaaatt tacgcggcgt cagttatgac ggactggatc gtaacgtgga
    26161 cgtggctatt tcgcggttaa gaaaaaaact gctcgataac gccgcagaac cttatcgcat
    26221 taaaactgtg cgtaacaaag gctatctttt tgcgcctcat gcatgggaat aagcgatgaa
    26281 aaaactgttt atccagtttt acctgttatt gtttgtctgc ttccttgtga tgtctctgct
    26341 ggttgggttg gtgtacaaat ttaccgccga acgcgcgggc aaacagtcgc tggatgattt
    26401 gatgaacagt ttgctgtatc tgatgcgcag cgaattgcgt gagatccccc cacacgactg
    26461 gggtaagacg ctgaaagaga tggatttaaa tctctctttc gatctgcgtg tcgagccact
    26521 gagtaaatac catcttgatg atatttccat gcacggactg cgtggcggcg aaattgtcgc
    26581 cctggacgat cagtacacgt ttttgcagcg tatcccgcgc agccactacg tgctggcagt
    26641 tggtcctgtt ccttatcttt attatctcca tcagatgcga ttgctggata tcgccctgat
    26701 cgcttttatt gctatttccc tcgcctttcc ggtgtttatc tggatgcgtc cgcactggca
    26761 ggatatgtta aaactggaag cagcggcgca acgatttggc gatgggcatc tctatgagcg
    26821 tatccacttt gatgagggtt cgagctttga acgacttggt atcgcattta accagatggc
    26881 ggacaatatc aacgccttga ttgccagcaa aaaacagctt attgacggta tcgctcacga
    26941 actgcgaaca ccgttagtgc gcctgtgtta tcgactggag atgagcgata acctgagcgc
    27001 cgccgagtcc caggcgttga atcgtgatat cagtcaactt gaagctttaa ttgaagagct
    27061 gctgacttat gcccgactcg atcgcccaca aaacgagctt catcttagcg aaccagacct
    27121 gccgttgtgg ctgtcaacgc atctggcaga tattcaggca gtaacgcccg ataaaacggt
    27181 acggataaaa acgctcgtgc aaggccatta tgcggcgttg gatatgcgct taatggagcg
    27241 cgtgctggat aatttgctca ataacgccct gcggtactgc cattcaacgg ttgaaaccag
    27301 cctgctactg tcggggaata gagcgacatt aattgttgag gatgatggcc cagggattgc
    27361 cccagaaaac cgcgaacata tctttgaacc ttttgttcgc ctcgatccca gccgggatcg
    27421 ctcaaccggc ggctgcgggc tggggctggc aattgtccac tctatagcac tggcaatggg
    27481 cggtacggtt aattgtgaca ccagcgaact gggtggtgct cgcttctcgt ttagctggcc
    27541 gttatggcat aacatcccgc aatttacctc tgcctgacac tacgcgcacg atggtgaagt
    27601 caccaccatt gtgctataaa ttaaggatgt tgtaactaaa gtggttaata ttatggcgcg
    27661 ttacgatctc gtagaccgac tcaacactac ctttcgccag atggaacaag agctggctgc
    27721 atttgccgct catcttgagc aacacaagct attggttgcc cgcgtgttct ctttgccgga
    27781 ggtaaaaaaa gaggatgagc ataatccgct taatcgtatt gaggtgaaac aacatctcgg
    27841 caacgacgcg cagtcgctgg cgttgcgtca tttccgccat ttatttattc aacaacagtc
    27901 cgaaaatcgc agcagcaaag ccgctgtccg tctgcctggc gtgttgtgtt accaggtcaa
    27961 taacctttcg caagcagcgt tggtcagtca tattcagcac atcaataaac tcaagaccac
    28021 gttcgagcat atcgtcacgg ttgagtcaga actccccacc gcggcacgtt ttgaatgggt
    28081 gcatcgtcat ttgccggggc tgatcaccct taatgcttac cgctcgctca ccgttctgca
    28141 cgaccccgcc actttacgtt ttggctgggc taataaacat atcattaaaa atttgcatcg
    28201 tgatgaagtc ctggcacagc tggaaaaaag cctgaaatca ccacgcagtg tcgcaccgtg
    28261 gacgcgcgag gagtggcaaa gaaaactgga gcgagagtat caggatatcg ctgccctgcc
    28321 acagaacgcg aagttaaaaa tcaaacgtcc ggtgaaggtg cagccgattg cccgcgtctg
    28381 gtacaaagga gatcaaaaac aagtgcaaca cgcctgccct acaccgctga ttgcactgat
    28441 taatcgggat aatggtgcgg gcgtgccgga cgttggtgag ttgttaaatt acgatgcaga
    28501 caatgtgcag caccgttata aacctcaggc gcagccgctt cgtttgatca ttccacggct
    28561 gcacctgtat gttgcagatt aacgcccggc tttcatactg ccgaccatct gttctggccg
    28621 tacccagctg tcaaactcgg cttcgctaag ataccccagc gcaagggccg cagcttttaa
    28681 ggtcagccct tctttatgcg cttttttggc gatctccgcg gctttgtcat aaccaatgtg
    28741 ggtgttaagc gcagtcacca gcatcagcga ttcattgagt aattgattga ttcgctcacg
    28801 attcggttca atacccactg cgcagtgttt gttaaaactt tccatgccat ctgccagcaa
    28861 gcgcaccgat tgcaggaaat tatggatcac catcggacgg aagacgttca gttcaaagtt
    28921 accagaagcg ccacccatgt tgatcgccac gtcgttcccc attacctgac agcagagcat
    28981 ggttaatgct tcacactggg ttgggttcac tttccccggc atgattgagc tgcccggctc
    29041 attttccggg attgagattt caccaattcc gcagcgcggg ccagaggcca gccagcggac
    29101 atcattggcg attttcatca gtgacgcagc caaccctttc aacgcgccgt gcgcctgaac
    29161 cagggcatca caggtcgcaa gcgcttcaaa tttgttcggc gcggtaacaa acggtgcaca
    29221 ggtaatgact gccagttcat ctgctacgcg acgcgcatac tccggatggg tatttagtcc
    29281 agtacccacc gctgtaccgc caagagccag ttccgctacg tgaggcaggc tgtattcgat
    29341 atgtttgaga ttatgctcga gcatcgctac ccagccggaa atctcctgcc ctagtgttag
    29401 cggcgtggcg tcctgcaagt gggttcgacc gattttgacg atatcggcaa atgcacgcga
    29461 tttttcactc agtgtctgtg tcagggtttt aagctgcgga atgagttgct tgcgcagcgc
    29521 cagcagcgcc gcaacgtgca tcgccgtcgg aaagacatcg ttggaacttt ggcttttgtt
    29581 cacgtcgtcg ttagggtgaa ctttacgttc catcccgcgc acgccgccga gtaattcact
    29641 ggcccggtta gccagcactt cgttcatgtt catgttactt tgcgtgccgg agccggtctg
    29701 ccagatagcc agcgggaatt cgtcgtcatg ctgtcctgcc agtacttcat ccgccgcctg
    29761 ccgaatggcg ctcgctttct cttcagacaa caagcctaaa tcttcattaa cttttgccgc
    29821 tgcgcgcttg gttagcgcca gcgcatgaat cagtgaggtg ggcattttct ccgtcgaaat
    29881 gcggaaatgc tccagcgagc gttgagtttg tgcgccccac agcttatctg ccgggacatc
    29941 aatcgccccc atcgaatctt tttcgctgcg tactgtattc atggcctgct cctcacctgt
    30001 ttaatttttt ctttctgttt tgctttcgtt aagcaacttt tagctcactt attatttact
    30061 atttgataac aaatgtttgg tctttcgtgc catgtaaaaa aaccgccccg aagggcggct
    30121 ctgtttattt cacacagcga gtgcactgtg tgagttgtat ctgctggaag aagtcatttc
    30181 ctttatcatc cacaaggata aacgccggga aatcttccac ttcaattttc cagatggctt
    30241 ccattcccag ttccggatat tcaacacatt ccaggctctt aatacttccc tgcgccaata
    30301 cagcggccgg accaccgata ctgccaaggt agaagccgcc gtgtttttta caggcatccg
    30361 tcacctgctg gctgcggttg cctttcgcca gcatgatcat acttccgccc tgcgcttgca
    30421 gttgatcgac ataagaatcc atccgtccgg cggtcgttgg gccaagagaa ccggaggcat
    30481 aaccttccgg cgttttggcc ggacccgcgt agtaaatcgg atgatcttta atgtactgcg
    30541 gcagcccttc accgttatcc atccgctctt tcagtttggc gtgagcaata tcacgaccga
    30601 cgataatcgt gccgttaagc gataagcgtg tagaaacggg atactgcgac aactgtgcga
    30661 ggatctcttt catcggacgg ttaaggtcaa cgcgcaccgc ttcgccttct cccgctttac
    30721 gcagctcttc agggatatat ttacctggat tatgttccag tttttcgatc cagatcccct
    30781 gacggttgat cttcgctttg atattacggt cagcagagca ggaaacaccc ataccaaccg
    30841 gacaggatgc gccgtgacgt ggcaggcgaa tcacgcgtat gtcgtgagcg aagtatttac
    30901 caccaaactg cgcacccaga ccgagatttt gcgcttcgat cagcaattct ttttccagtt
    30961 ccacatcgcg gaatgcctga ccgtgctcat tcccttccgt tggcagttcg tcatagtatt
    31021 tagcggaagc cagtttcact gttttaaggt tagtttctgc agaagttcca ccaattacga
    31081 acgcaatatg atacggagga caggccgccg tacccagcgt gcgcatcttc tcaaccaggt
    31141 aatttttcag tttccccggc gttagtaacg ctttggtttc ctgatagaga tacgtcttgt
    31201 ttgccgaacc accacctttg gcgatacaga ggaatttgta ctcgtcgcca tcaacggcat
    31261 aaagatcgat ctgcgctggc agattggtgc cggtattcac ctctttatac atatccagcg
    31321 gcgcgttttg cgagtagcgc aaattatctt cgatataagt gttatagaca ccgcgcgcca
    31381 gcgccgcttc atcacagcca ccggtccata cacgctgccc ttttttacca acaataatcg
    31441 cagtgccggt atcctgacag gttggcagaa cacctttcgc cgcgatgtcg gagttgcgca
    31501 ggaattgcag cgccacatat ttatcatttt cgctggcttc cgggtcacgc agaatgtcgg
    31561 ccacctgttg ttggtgagcc ggacgcagca taaatgacgc atcatgaaac gcctgacgcg
    31621 ccaacagagt taacgcttcg ggtgcgactt tcaaaatctc ctgcccttca aattcagata
    31681 cgctaacgtg ttcgctggtt agcaggtaat actcagtatc atcttttttg agtggaaaag
    31741 gagcctgata atgaaagggt ttgtttgaca ttgttctctc acttactgcc tggtttggtt
    31801 atgctctggg cgggtgttcc gttgccctgt taaaagcgag taacaatatc ctacacgctt
    31861 ttttaacaaa aactgagact agtacgactt tttgcggctc caggttactt cccgtaggat
    31921 tcttgcttta atagtgggat taatttccac attaaaacag ggattgatca tgcaaaaact
    31981 cattaactca gtgcaaaact atgcctgggg cagcaaaacg gcgttgactg aactttatgg
    32041 tatggaaaat ccgtccagcc agccgatggc cgagctgtgg atgggcgcac atccgaaaag
    32101 cagttcacga gtgcagaatg ccgccggaga tatcgtttca ctgcgtgatg tgattgagag
    32161 tgataaatcg actctgctcg gagaggccgt tgccaaacgc tttggcgaac tgcctttcct
    32221 gttcaaagta ttatgcgcag cacagccgct ctccattcag gttcatccaa acaaacgcaa
    32281 ttctgaaatc ggttttgcca aagaaaatgc cgcaggtatc ccgatggatg ccgccgagcg
    32341 taactataaa gatcctaacc acaagccgga gctggttttt gcgctgacgc ctttccttgc
    32401 gatgaacgcg tttcgtgagt tttccgagat tgtctcccta ctccagccag tcgcaggtgc
    32461 acatccggca attgctcact ttttacaaca gcctaatgcc gaacgtttaa gcgaactgtt
    32521 cgccagcctg ttgaatatgc agggtgaaga aaaatcccgc gcgctggcga ttttaaaatc
    32581 ggcgctcgac agtcagcagg gtgaaccgtg gcaaacgatt cgtttaattt ctgaatttta
    32641 cccggaagac agcggcctgt tctccccgct gttactgaat gtggtgaaat tgaatcctgg
    32701 cgaagcgatg ttcctgttcg ctgaaacacc gcacgcttac ctgcaaggcg tggcgctgga
    32761 agtgatggcg aactccgata acgtgctgcg tgcgggtctg acgcctaagt acattgatat
    32821 tccggaactg gttgccaatg taaaattcga agccaaaccg gctaaccagt tgttgaccca
    32881 gccggtgaaa caaggtgcag aactggactt cccgattcca gtggatgatt ttgccttctc
    32941 gctgcatgac cttagtgata aagaaaccac cattagccag cagagtgccg ccattttgtt
    33001 ctgcgtcgaa ggcgatgcaa cgttgtggaa aggttctcag cagttacagc ttaaaccggg
    33061 tgaatcagcg tttattgccg ccaacgaatc accggtgact gtcaaaggcc acggccgttt
    33121 agcgcgtgtt tacaacaagc tgtaagagct tactgaaaaa attaacatct cttgctaagc
    33181 ttattaaagg cttataacac cttcaggcgg ccagtccgcc tgatttcatt ttatggataa
    33241 tcattatgaa taaatcgctg gtagcggtag gcgtcattgt tgcgctaggc gtagtctgga
    33301 caggcggcgc atggtataca ggcaagaaga ttgaaaccca tctcgaagac atggtcgcgc
    33361 aggcgaacgc gcaactcaaa ctgacagctc ctgaatccaa cctggaagtg agttatcaaa
    33421 actatcatcg cggcgtattc agcagccagt tgcaactgtt ggtgaaaccc attgccggga
    33481 aagaaaatcc gtggattaaa agcggtcaga gcgtcatctt caacgaatcg gttgatcatg
    33541 gtcccttccc gcttgcccag cttaaaaaac tgaacctgat cccgtcgatg gcatcaattc
    33601 aaaccacgct ggttaataac gaagtaagca aaccactgtt tgatatggca aaaggtgaaa
    33661 cgccttttga gattaactcg cgcattggtt acagcggtga ttccagttcc gatatttcgc
    33721 tcaagccact gaattacgag caaaaggatg aaaaagtcgc ctttagcggc ggcgagttcc
    33781 agttaaatgc tgacagagac ggcaaagcca tctccctttc cggggaggcg caaagtggtc
    33841 ggatagacgc agttaacgaa tacaaccaga aagtgcagtt gacctttaat aatctgaaaa
    33901 ccgacggttc cagcacgctg gcaagttttg gtgagcgcgt aggaaaccaa aaactgtcac
    33961 tggaaaaaat gaccatttca gtggaaggca aagaactggc actgctggaa ggcatggaga
    34021 tcagcggtaa atcggatctg gtcaatgacg gtaaaacgat caatagccaa ctggattact
    34081 cgctaaacag cctgaaggta cagaatcagg atctgggcag cggcaagctg actttaaaag
    34141 tcggccagat tgatggtgaa gcctggcatc agttcagcca gcaatataac gcgcaaactc
    34201 aggcgctgct ggcacagcca gaaattgcca acaatcccga actttatcag gagaaagtga
    34261 cggaagcctt ctttagcgcc ctgccgctga tgttgaaagg cgatccggtg attactgtcg
    34321 cgccgctaag ctggaaaaac agtcagggtg aaagtgcgct gaatctgtcg ctgttcctga
    34381 aagatccggc aacgactaaa gaagcgccgc aaacgctggc gcaggaagta gatcgttcgg
    34441 ttaaatctct ggatgcgaaa ctgaccattc cggtggatat ggcaactgag tttatgactc
    34501 aggtagcgaa gctggaaggt tatcaggaag atcaagcgaa aaaactggcg aaacagcaag
    34561 ttgaaggtgc atcagcaatg gggcagatgt tccgtctgac caccttgcag gacaatacca
    34621 tcaccaccag cctgcaatat actaacggtc agataacgtt aaatgggcag aaaatgtcgt
    34681 tagaagattt tgttggcatg tttgcgatgc cagctcttaa cgttccggct gtaccggcaa
    34741 ttccgcagca gtaattcacg gccaaaacgc cggagaattt tcacttcggc gttttcatct
    34801 gaaaacaaac cagagattgc ctgatgcgct acgcttatca ggcctacctt ttcctgcaac
    34861 actttgaatt tatgagtt
//
LOCUS       DADMHC010000021        34691 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.021, whole genome shotgun sequence.
ACCESSION   DADMHC010000021 DADMHC010000000
VERSION     DADMHC010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 34691)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34691)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34691
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.021"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            191..2038
                     /gene="ldtD"
                     /locus_tag="JNZ57_000814"
     CDS             191..2038
                     /gene="ldtD"
                     /locus_tag="JNZ57_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HAY8827128.1"
                     /translation="MLLNMMCGRRLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAV
                     SEQGEALPQAQATAIMAGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARD
                     MQPMWENRDAVKAFQQQLAEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGY
                     LHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYA
                     AMHESLLALLSDTKPWPQLTGKATLRLGQWSNDVPALREILQRTGMLDGGPKITLPGD
                     DTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGL
                     GADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTELSTGIMVNIPAYSLVYYQNG
                     NQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESH
                     GYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYL
                     HDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDAGWNDKRISDALKQGDTRYVNI
                     RQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPARSSSQIVSKAEQLIR"
     gene            2219..2767
                     /locus_tag="JNZ57_000815"
     CDS             2219..2767
                     /locus_tag="JNZ57_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbK family protein"
                     /protein_id="HAY8827129.1"
                     /translation="MDKFDANRRKLLALGGVALGAAILPTPAFATLSTPRPRILTLNN
                     LHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQLYRLQGLLGTR
                     KPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNIRKAALSMRA
                     GGVGYYPRSNFVHIDTGPARHW"
     gene            2794..3441
                     /gene="gloC"
                     /locus_tag="JNZ57_000816"
     CDS             2794..3441
                     /gene="gloC"
                     /locus_tag="JNZ57_000816"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003035823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase GloC"
                     /protein_id="HAY8827130.1"
                     /translation="MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDD
                     SGLTLMQILLTHGHLDHVGAAAELAQHYGVPVFGPEKEDEFWLQGLPVQSRMFGLEEC
                     QPLTPDRWLNEGDTISIGNVTLQVLHCPGHTPGHVVFFDDRAKLLISGDVIFKGGVGR
                     SDFPRGDHNQLISSIKDKLLPLGDDVTFIPGHGPLSTLGYERLHNPFLQDEMPVW"
     gene            complement(3663..4853)
                     /locus_tag="JNZ57_000817"
     CDS             complement(3663..4853)
                     /locus_tag="JNZ57_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009653304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HAY8827131.1"
                     /translation="MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTP
                     VLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPG
                     GTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD
                     ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFA
                     RGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMK
                     AAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGA
                     NRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI
                     VAVL"
     gene            complement(5038..6126)
                     /gene="ompF"
                     /locus_tag="JNZ57_000818"
     CDS             complement(5038..6126)
                     /gene="ompF"
                     /locus_tag="JNZ57_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpF"
                     /protein_id="HAY8827132.1"
                     /translation="MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHY
                     FSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNK
                     TRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVAT
                     YRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADR
                     TNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKT
                     QDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVD
                     YIINQIDSDNKLGVGSDDTVAVGIVYQF"
     gene            complement(6727..8127)
                     /gene="asnS"
                     /locus_tag="JNZ57_000819"
     CDS             complement(6727..8127)
                     /gene="asnS"
                     /locus_tag="JNZ57_000819"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HAY8827133.1"
                     /translation="MSVVPVADVLQGRVAVDSEVTVRGWVRTRRDSKAGISFLAVYDG
                     SCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQFEIQASKVEVAGW
                     VEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWV
                     STPLITASDTEGAGEMFRVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGET
                     YACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKA
                     VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRKFENPVYWG
                     VDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIG
                     GSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQN
                     VRDVIPFPRTPRNASF"
     gene            complement(8296..9498)
                     /gene="pncB"
                     /locus_tag="JNZ57_000820"
     CDS             complement(8296..9498)
                     /gene="pncB"
                     /locus_tag="JNZ57_000820"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706850.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HAY8827134.1"
                     /translation="MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVHVAAEFRCRGD
                     DLLGIYADAIREQIQAMQHLRLQDDEYQWLSALPFFKADYLNWLREFRFNPEQVTVSN
                     DNGKLDIRLSGPWREVILWEVPLLAVISEMVHRYRSPQADVAQALDTLESKLVDFSAL
                     TAGLDMSRFHLMDFGTRRRFSREVQETIVKRLQQESWFVGTSNYDLARRLSLTPMGTQ
                     AHEWFQAHQQISPDLANSQRAALAAWLEEYPDQLGIALTDCITMDAFLRDFGVEFASR
                     YQGLRHDSGDPVEWGEKAIAHYKKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQL
                     SFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFD
                     LPHIKKAS"
     gene            9764..12376
                     /gene="pepN"
                     /locus_tag="JNZ57_000821"
     CDS             9764..12376
                     /gene="pepN"
                     /locus_tag="JNZ57_000821"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000193787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HAY8827135.1"
                     /translation="MTQQPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVR
                     HGASDAPLRLNGEDLKLVSVHINDEPWTAWKEEEGALVISNLPEHFTLKIVNEISPAA
                     NTALEGLYQSGDALCTQCEAEGFRHITYYLDRPDVLARFTTKIIADKTKYPFLLSNGN
                     RVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRG
                     NLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYV
                     LARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDL
                     GSRAVNRINNVRTMRGLQFAEDASPMAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIH
                     TLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQSGTPIVTV
                     KDDYNPETEQYTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVISLQKGGHPVNS
                     VLNVTQAEQTFVFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWD
                     AAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNE
                     MAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANYQSEYRVEHEDIAKRTLRN
                     ACLRFLAFGETHLADVLVSKQFHEANNMTDALAALSAAVAAQLPCRDALMQEYDDKWH
                     QDGLVMDKWFILQATSPAANVLETVRGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAFH
                     AEDGSGYQFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDAKRQEKMRAALEQLKGLEN
                     LSGDLYEKITKALA"
     gene            complement(12419..13170)
                     /gene="ssuB"
                     /locus_tag="JNZ57_000822"
                     /pseudo
     CDS             complement(12419..13170)
                     /gene="ssuB"
                     /locus_tag="JNZ57_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309043.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonates ABC transporter ATP-binding
                     protein"
     gene            complement(13167..13958)
                     /gene="ssuC"
                     /locus_tag="JNZ57_000823"
                     /pseudo
     CDS             complement(13167..13958)
                     /gene="ssuC"
                     /locus_tag="JNZ57_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415454.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonate ABC transporter permease
                     SsuC"
     gene            complement(13969..15114)
                     /gene="ssuD"
                     /locus_tag="JNZ57_000824"
                     /pseudo
     CDS             complement(13969..15114)
                     /gene="ssuD"
                     /locus_tag="JNZ57_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706856.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FMNH2-dependent alkanesulfonate monooxygenase"
     gene            complement(15111..16070)
                     /locus_tag="JNZ57_000825"
     CDS             complement(15111..16070)
                     /locus_tag="JNZ57_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonate ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8827136.1"
                     /translation="MRNIIKLALVGLLSVSTIAVAAESSPEALCIGYQKGSIGMVLAK
                     SHQLLEKRYPQSKISWVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVS
                     VEPPKPKAEVILVAENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQP
                     TYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPY
                     AEKNGAFIQGVLATFSEADALTRSQREQSIALLAKTMGLPAPVIASYLDHRPPTTIKP
                     VNAEVAALQQQTADLFYENRLVPKKVDIRQRIWQPTQLEGKQL"
     gene            complement(16063..16638)
                     /gene="ssuE"
                     /locus_tag="JNZ57_000826"
     CDS             complement(16063..16638)
                     /gene="ssuE"
                     /locus_tag="JNZ57_000826"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HAY8827137.1"
                     /translation="MRVITLAGSPRFPSRSSSLLEYAREKLNGLDVEVYHWNLQNFAP
                     EDLLYARFDSPALKTFTEQLQQADGLIVATPVYKAAYSGALKTLLDLLPERALQGKVV
                     LPLATGGTVAHLLAVDYALKPVLSALKAQEILHGVFADDSQVIDYHHRPQFTPNLQTR
                     LDTALETFWQALHRRDVQVPDLLSLRGNAHA"
     gene            16994..17536
                     /locus_tag="JNZ57_000827"
     CDS             16994..17536
                     /locus_tag="JNZ57_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415458.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8827138.1"
                     /translation="MKKSVLTAFITVVCATSSVMAADDNAITDGKVTFNGKVIAPACT
                     LVAATKDSVVTLPNVSATKLQTNGAVSGVKTDVPIALEGCDVTVTKNATFTFSGTADG
                     VQPTAFANQATTDAATNVALQMYLPDGSTSVTPGTETSNIQLADSAEQTVTFKVDYIA
                     TGKATSGNVNAVTNFHINYY"
     gene            17619..18327
                     /locus_tag="JNZ57_000828"
                     /pseudo
     CDS             17619..18327
                     /locus_tag="JNZ57_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415459.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
     gene            18352..20951
                     /locus_tag="JNZ57_000829"
                     /pseudo
     CDS             18352..20951
                     /locus_tag="JNZ57_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706863.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis usher protein"
     gene            20942..22012
                     /locus_tag="JNZ57_000830"
     CDS             20942..22012
                     /locus_tag="JNZ57_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8827139.1"
                     /translation="MQIIFGEKCVLLLRLFFAAVLMLWCAQTAAYSGQCHTTQGNPYI
                     GVNFGVKTLEEEENTAGVVKDKFYQWNESNDYYVSCDCDKDNVRSGRWAFAADSPLVY
                     LGDNWYKINDYLAAKVLLQVKGSSPTAVPFENVGTGADTRWHICDPGGQRLGGQGASG
                     NSGSFSLKILQPFVGSVVIPPMALARLFECYNIPAGDSCTTTGTPVLVYYLSGTINSL
                     GSCSVNAGETIEVDLGDVFAANFRVVGHKPLGARTAELAIPVRCNTGNAGLVNVNLSL
                     TATTDPSYPQAIKTSRPGVGVVVTDSQNNIISPAGGTLPLSIPDDADSIARMNVYPVS
                     TTGVPPETGRFEATATVRINFD"
     gene            22024..22566
                     /locus_tag="JNZ57_000831"
     CDS             22024..22566
                     /locus_tag="JNZ57_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8827140.1"
                     /translation="MKKKTIFQCVILFFSILNIHVGMAGPEQVSMHIYGNVVDQGCDV
                     ATKSALQNIHIGDFNISDFQAANTVSTAADLNIDITGCAAGITGADVLFSGEADTLAP
                     TLLKLTDTGGSGGMATGIAVQILDAQSQQEIPLNQVQPLTPLKAGDNTLKYQLRYKST
                     KAGATGGNATAVLYFDLVYQ"
     gene            22574..23089
                     /locus_tag="JNZ57_000832"
     CDS             22574..23089
                     /locus_tag="JNZ57_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415463.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HAY8827141.1"
                     /translation="MLKRIIWILFLLGLTGGCELFAHDGTVNISGSFRRNTCVLAQDS
                     KQINVQLGDVSLTRFFHGNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVQSEMLSI
                     ESGTDAASGLAIAILDDAKILIPLNQASKDYSLHSGKVPLTFYAQLRPVNSDVQSGKV
                     NASATFVLHYD"
     gene            23055..23793
                     /locus_tag="JNZ57_000833"
                     /pseudo
     CDS             23055..23793
                     /locus_tag="JNZ57_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706867.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
     gene            23904..24914
                     /gene="pyrD"
                     /locus_tag="JNZ57_000834"
     CDS             23904..24914
                     /gene="pyrD"
                     /locus_tag="JNZ57_000834"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HAY8827142.1"
                     /translation="MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPFEALVRQKVPA
                     KPVNCMGLTFKNPLGLAAGLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFR
                     LVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICME
                     KIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKI
                     APDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKST
                     EIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVT
                     HI"
     gene            25088..25630
                     /gene="zapC"
                     /locus_tag="JNZ57_000835"
     CDS             25088..25630
                     /gene="zapC"
                     /locus_tag="JNZ57_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415466.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapC"
                     /protein_id="HAY8827143.1"
                     /translation="MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAF
                     SPAGFCVDDAALYFSFEEKCRDFNLSKEQKAELVLNALVAIRYLKPQMPKSWHFVSHG
                     EMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKI
                     MNDRLKPQVNVDSFSLEQAV"
     gene            complement(25627..26736)
                     /gene="ycbX"
                     /locus_tag="JNZ57_000836"
     CDS             complement(25627..26736)
                     /gene="ycbX"
                     /locus_tag="JNZ57_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-N-hydroxylaminopurine resistance protein YcbX"
                     /protein_id="HAY8827144.1"
                     /translation="MATLTRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGT
                     FITARQFPQMVRFTPSPVHDGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIA
                     PDAINKWLSGFFSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQ
                     RCPASVKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQ
                     KHPAGEPLKTLQSFRTAQDNGDVDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAAA
                     ADDTANITQQPDANVDIDWQGQAFRGNNQQVLLEQLENQGIRIPYSCRAGICGSCRVQ
                     ILEGEVSPLKKSAMGDDGTILCCSCVPKTALKLAR"
     gene            26980..29088
                     /gene="rlmKL"
                     /locus_tag="JNZ57_000837"
     CDS             26980..29088
                     /gene="rlmKL"
                     /locus_tag="JNZ57_000837"
                     /EC_number="2.1.1.173"
                     /EC_number="2.1.1.264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 23S rRNA
                     (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA
                     (guanine(2445)-N(2))-methyltransferase RlmL"
                     /protein_id="HAY8827145.1"
                     /translation="MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLV
                     YQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTI
                     RNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLH
                     LRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGL
                     HRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNAR
                     LAGIAELITFEVKDVAQLTNPLLKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK
                     NQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVA
                     EDYANRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYSDWVVVQEYAPPKTI
                     DAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNA
                     HLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTT
                     VDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKR
                     MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKT
                     LSQDFARNRQIHNCWLITAA"
     gene            29100..31007
                     /locus_tag="JNZ57_000838"
     CDS             29100..31007
                     /locus_tag="JNZ57_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY8827146.1"
                     /translation="MSLISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKST
                     LMKILNREQGLDDGRIIYEQDLIVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYH
                     DISRLVMNDPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQLGLDPNVALSSLSGG
                     WLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFIRN
                     MATRIVDLDRGKLVTYPGNYDQYLLEKEEALRVEELQNAEFDRKLAQEEVWIRQGIKA
                     RRTRNEGRVRALKAMRRERGERREVMGTAKMQVEEASRSGKIVFEMEDVCYQVDGKQL
                     VKDFSAQVLRGDKIVLIGPNGCGKTTLLKLMLGQLQADSGRIHVGTKLEVAYFDQHRA
                     ELDPDKTVMDNIAEGKQEVMVNGKPRHVLGYLQDFLFHPKRAMTPVRALSGGERNRLL
                     LARLFLKPSNLLILDEPTNDLDVETLELLEELIDSYQGTVLLVSHDRQFVDNTVTECW
                     IFEGGGKIGRYVGGYHDARGQQEQYVALKQPAVKKTEEAAAAKAETVKRSSSKLSYKL
                     QRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFER
                     WEYLEALKNGG"
     gene            31137..32390
                     /gene="pqiA"
                     /locus_tag="JNZ57_000839"
     CDS             31137..32390
                     /gene="pqiA"
                     /locus_tag="JNZ57_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiA"
                     /protein_id="HAY8827147.1"
                     /translation="MCEHHHAAKHILCSQCDMLVALPRLEHGQKAACPRCGTTLTVAW
                     DAPRQRPTAYALAALFMLLLSNLFPFVNMNVAGVTSEITLLEIPGVLFSEDYASLGTF
                     FLLFVQLVPSFCLITILLLVNRAELPVRLKEQLARVLFQLKTWGMAEIFLAGVLVSFV
                     KLMAYGSIGVGSSFLPWCLFCVLQLRAFQCVDRRWLWDDIAPMPELRQPLKPGVTGIR
                     QGLRSCSCCTAILPADEPVCPRCSTKGYVRRRNSLQWTLALLVTSIMLYLPANILPIM
                     VTDLLGSKMPSTILAGVILLWSEGSYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHG
                     KRDSERMHLIYEVVEFVGRWSMIDVFVIAVLSALVRMGGLMSIYPAMGALMFALVVIM
                     TMFSAMTFDPRLSWDRQPESEHEES"
     gene            32395..34035
                     /gene="pqiB"
                     /locus_tag="JNZ57_000840"
     CDS             32395..34035
                     /gene="pqiB"
                     /locus_tag="JNZ57_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706874.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HAY8827148.1"
                     /translation="MESNNGEAKIQKVKNWSPVWIFPIVTALIGAWVLFYHYSHQGPE
                     VTLITANAEGIEGGKTTIKSRSVDVGVVESATLADDLTHVEIKARLNSGMEKLLHKDT
                     VFWVVKPQIGREGISGLGTLLSGVYIELQPGAKGSKMDKYDLLDSPPLAPPDAKGIRV
                     ILDSKKAGQLSPGDPVLFRGYRVGSVETSTFDTQKRNISYQLFINAPYDRLVTSNVRF
                     WKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPKTAFVLYDDQKS
                     IQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMRQTFNDDYR
                     IPVLIRIEPERLKMQLGENTDVVEHLGELLKRGLRGSLKTGNLVTGALYVDLDFYPNT
                     PAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTFSESQRT
                     MKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSAAYNKMVADMQRL
                     DQVLRELQPVLKTLNEKSNALVFEAKDKKDPEPKRAKQ"
     gene            34032..34595
                     /gene="pqiC"
                     /locus_tag="JNZ57_000841"
     CDS             34032..34595
                     /gene="pqiC"
                     /locus_tag="JNZ57_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HAY8827149.1"
                     /translation="MKKWLVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNR
                     LLWVEQVTVPDYLAGNGVVYQTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGW
                     VVASQPLGSVQDTLNVTVTEFNGRYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDG
                     YDEMVKVLAGVWSQEAASIAQEIKRLP"
BASE COUNT         8774 a         8429 c         9025 g         8463 t
ORIGIN      
        1 taacggcgcg cttttcttta aacttcttta cattaggtta tgtaaaaacg tatcggcgtt
       61 tatatactga agataagcct gatgagtaac aggcttgctc gtcatacttt cgtgagtatt
      121 ggcgttgtac aggcaagtcg taaaataaca gcctggctat tcagagtatg ataaaaacag
      181 ggggcaaggg atgttgctta atatgatgtg tggtcgtcgg ctgtcggcaa tcagtttgtg
      241 cctggccgta acattcgctc cactgttcaa tgcgcaggcc gatgagcctg aagtaatccc
      301 tggcgacagc ccggtggctg tcagtgaaca gggcgaggca ctgccgcagg cgcaagccac
      361 ggcaataatg gcggggatcc agccattgcc tgaaggtgcg gcagaaaaag cccgcacgca
      421 aatcgaatct caattacccg caggttacaa gccggtttat cttaaccagc ttcaactgtt
      481 gtatgccgca cgcgatatgc aacccatgtg ggaaaaccgt gatgctgtta aagccttcca
      541 gcaacagctg gcagaggtgg cgattgccgg tttccagccg cagtttaata aatgggtaga
      601 gttactgacc gatcctggtg ttaacgggat ggcacgcgac gtagtgctct ctgatgcgat
      661 gatgggctat ctccatttca ttgcaaatat tccggtcaaa ggcactcgct ggctatatag
      721 cagtaaacct tatgcacttg caacgccgcc gctctcggtg attaaccaat ggcagctggc
      781 gctggataaa ggtcaattgc ctacgtttgt tgcaggactg gcaccgcagc atccgcaata
      841 tgcggcgatg catgaatcgt tactggcctt actcagtgac accaaaccgt ggccccaact
      901 gaccggcaaa gcaacgttgc gcctagggca gtggagtaac gacgtaccgg cgttgcgcga
      961 aatattgcaa cgcacaggca tgttggacgg ggggccgaaa attactctac ctggcgatga
     1021 cacgccaact gacgcggtag tcagcccatc cgctgttact gttgaaacag cagaaactaa
     1081 gccgatggac aagcaaacga cgtctcgtag taaacctgcg cctgccgttc gcgccgccta
     1141 cgataatgaa ctggtggaag ccgttaaacg ttttcaggca tggcaaggat tgggggcaga
     1201 tggtgctatt ggcccggcaa cacgtgactg gttaaacgta acgcccgccc agcgtgctgg
     1261 cgtgttggct ctcaacatcc agcgattgcg cttgctgcca acagagcttt ctaccgggat
     1321 catggttaac attccggcct attcgctggt ctactatcag aacggcaatc aggtgctgga
     1381 ttcgcgagtc attgtcggtc gccccgatcg caaaacgccg atgatgagca gtgcccttaa
     1441 caacgtagtg gtaaacccgc cgtggaacgt acctccaact ctggcacgca aagatattct
     1501 gccaaaagtg cgcaacgatc cgggatatct cgaaagccat ggctatacgg tgatgcgtgg
     1561 ctggaacagc agagaagcga ttgacccatg gcaggttgac tggtctacaa tcacggcctc
     1621 gaatttaccg ttccgcttcc agcaggctcc aggcccacgg aactcgctgg ggcgctataa
     1681 attcaatatg ccgagttcag aggccattta tttgcatgac acgccgaacc acaatctgtt
     1741 caagcgtgat acacgcgcat tgagctcagg ctgtgtacga gtgaataaag cttccgatct
     1801 ggcgaatatg ctgttgcagg atgcaggctg gaatgacaaa cgtatttctg atgcgctgaa
     1861 gcagggtgat acacgttacg tcaatattcg gcagtcgatt ccggtgaatc tctactacct
     1921 gacggccttt gttggtgcag atggtcgtac ccagtatcgt acagatattt acaattatga
     1981 tctgcctgcg cgatccagct cgcaaatcgt atcgaaagcg gaacaattaa tcaggtaaat
     2041 gaagtagttc ggggaaatca gttgtcgtaa taattagcat gattgggggc gattctctgc
     2101 agcccccgtc actgctgggg ttgagtcatc ttgacgtctg ctttacgggc ggttaaggtg
     2161 cctcttgtgc gccagaagtg catataaacg ataacattga cctgtagact tgattatcat
     2221 ggacaaattc gacgctaatc gccgcaaatt gctggcgctt ggtggcgttg cactcggtgc
     2281 cgccatcctg ccaacccctg cgtttgcaac actctctacc ccacgcccgc gcattttgac
     2341 actcaataat cttcataccg gagagtcaat caaagcggag tttttcgatg gcagaggcta
     2401 tattcaggaa gaattggcaa aacttaacca ttttttccgc gattaccgcg cgaacaaaat
     2461 aaagtccatc gacccaggat tattcgacca gttgtatcgc ctgcaagggt tgttaggcac
     2521 gcgcaaaccg gtgcaactca tttccggtta tcgttccatt gataccaaca atgaactacg
     2581 cgcccgcagc cgtggagtag cgaagaaaag ctatcacact aaaggccagg cgatggattt
     2641 ccatattgaa ggtatcgcgt taagcaatat tcgcaaagcc gcgttatcta tgcgcgcagg
     2701 tggtgtagga tattacccac gtagtaactt tgtgcatatt gataccgggc cagcacggca
     2761 ctggtagcaa tcgcttaacg aaacaggggc agtatgaact atcgtattat tccggtcacc
     2821 gcattctccc agaactgttc attaatctgg tgtgaacaaa cccgtctggc cgcactggtc
     2881 gatcctggcg gcgatgcgga aaaaatcaaa caggaagttg atgacagcgg cctgacactg
     2941 atgcagatcc tgctgacgca tggtcatctg gaccacgttg gcgcagcggc ggaactggcg
     3001 caacattacg gcgtgccggt ttttggcccg gaaaaagaag atgagttctg gctgcaaggc
     3061 ttgcctgtgc aaagtcgtat gtttggtctg gaagagtgcc agccgctgac gccagatcgt
     3121 tggctgaacg aaggcgatac catcagcata ggaaatgtga ctttacaggt gttacattgc
     3181 cctgggcata cgccgggtca tgtcgtgttt tttgatgatc gggcaaagct gctgatttct
     3241 ggcgatgtta ttttcaaagg cggagtaggg cgcagtgact tcccgcgtgg cgatcataat
     3301 caactgattt cttcaatcaa agataaattg ctgccactgg gggatgacgt gacatttatt
     3361 ccgggtcacg gaccattatc cacacttggt tatgaacgcc tgcataatcc cttcctgcaa
     3421 gacgaaatgc ccgtctggta aggcacataa aaaagcccgc ttttaatgcg ggcctggatt
     3481 tctggcaaag tgcgctttgt ttatgccgga tgcggcacga gcgccttatc cggcctacaa
     3541 aatcgtgcaa attcaaaata ttgcagggga cgcgtaggcc tgataagcgt agcgcatcag
     3601 gcaatgttgc gtttgtcatc agtctcagcc cgcttttcag cgggcttcat tgtttttaat
     3661 gcttacagca ctgccacaat cgcttcgcac agcggagcca tgttatctgg tgtcatcccg
     3721 gccacattta cgcgaccaga agcaaccgca tatacgccaa actcttcgcg cagacgcagc
     3781 acttgttctt ttgtcaggcc actgaaggag aacatgccgt tctgtttgat gataaagctg
     3841 aagtcgcggt ttgcgccttt ttcctgcagc gtattgacga acaactgacg catacgctga
     3901 atacgctggc gcatatcagt cagctcttgt tcccaaatcg cacgtaacgc atcgttgctc
     3961 aggatggtgg caacaacaga agcgccgtgt gctggtgggt tagagtagtt agcgcgaatc
     4021 gccgctttca tttggctgaa tgcgcgatca acggtttcac tgtcggcagc aaccagagta
     4081 caagcgccaa cacgctcgtt gtacaggcca aagtttttag agtaggaact ggcaacaatc
     4141 agctctttat gcatagccgc gaaagcgcgc agtccttcag catcttcttc cagaccacgg
     4201 gcaaaaccct ggtaagcgaa gtcaaacagc ggtaaccagc ctttctcaac ggagagttgt
     4261 gccagtgtct gccattgttc cagtgtaggg tcgataccgg ttgggttatg gcagcagcca
     4321 tggaacagca ctacgtcgcc agcctgagct tcattcaggc tgttaatcag tgcatcgaag
     4381 tcaagagtgt gattttccgc atcataataa gcgtattcac gaacttccag acctgcagag
     4441 ttaaagacgc tcttatggtt cggccagctt gggttgctca cccacactcg cttaacgctg
     4501 gtattttttg ccaggaaatc ggcagctacg cgtagtgcgc cagtgccccc cggagtctgt
     4561 gccgtgcgag cacgtttgtc attgatcagg gcgctacctt taccaaacag cagttcctga
     4621 gtgcagcgac caaattcagg gatgccgtca atgccgaggt aatttttggt ggtttcattt
     4681 tcgagcagat actgttcagc ctttttcacg ctggtcagta ccggggtttt gcccgtctca
     4741 tctttataga caccaatccc gaggttaatt ttgccgggac gttcatcggc acgaaacaga
     4801 tcggccaggc ccagaatcgg gtcggcagga gcggcggtaa tgttctcaaa catgacgagg
     4861 ttccattatg gttacagaag ggaagtccgc tatcagggta acgggagatt tacaaaattc
     4921 caactattac tgatgaaaac gcaggctgtt tttgcaagac gtgagattgc tctggaaggt
     4981 ataaaaaaaa caggaccaaa gtcctgtttt ttcggcattt aacaaagagg tgtgctatta
     5041 gaactggtaa acgataccca cagcaacggt gtcgtctgaa cctacgccca gtttgttgtc
     5101 agaatcgatc tggttgatga tgtagtcaac ataggtggac atgtttttgt tgaagtagta
     5161 ggttgcgccc acttcaaagt agttcaccag atcaacatca ccgatacctt ctacgtcttt
     5221 cgctttagat ttggtgtaag cgatggacgg acgcagaccg aaatcgaact ggtattgtgc
     5281 aactaacaga acgtcttgcg ttttgttggc gaagccgctg gtgtttgtaa atttattagt
     5341 gatcggcgta gcgttacggg tttcaccgta gttcgctgcc aggtagatgt tgttcgcgtc
     5401 gtacttcaga ccagtagccc actgttcagc ttttttaccg ttgccaagag gttgagcttc
     5461 ttgcaggttg gtacggtcag ctgcaccata agcaccaacg ataccaaagc cttcgtattc
     5521 gtagctgata gaaccgccaa caccgtcgcc gttagaacgg cgtgcagtgt cacgctcgtt
     5581 tttacccagg tactgaacag cgaagttcag gccatcaacc agaccaaaga agttggagtt
     5641 acgataggta gcaacgccgc caacacgacc aacgaagaag tcatcgctgt atgcagtatc
     5701 accaccaaat tctggcagca tatcggtgta acccagtgca tcataaacca caccgtagtt
     5761 acggccgtaa tcgaaagaac caacgtcagc gtatttaaga cccgcgaatg ccagacgcgt
     5821 tttgttacca gtttgagcgt cagcgccttc agagttgtta ccttggaagt tatattccca
     5881 ctgaccataa ccggtcagat cggaattgat ttgagtttcc cctttaaaac caagacgggc
     5941 ataggtcatg tcgccattgc caccgtaact gttttcaccg ttacccttgg aaaaataatg
     6001 cagaccaaca gctttaccgt acagatctac tttgttgcca tctttgttat agatttctgc
     6061 agcgtttgca gtacctgcta ctaacagagc agggacgatc actgccagaa tattgcgctt
     6121 catcattatt tattaccctc atggtttttt ttatgacacc tgccactgcc gtcaataagt
     6181 tctgtcaata aaaatttacg gaactattga tgagagtttg gtgtctttat gtgtctgcag
     6241 gcatctttcc attcaaacta acgtttcgct accgtgaaag tgctgcaaag ataaagattt
     6301 agtttcaaaa agaaaaatat gtaatcaaaa gtaaaaatta aggaactttg tgaacaccgt
     6361 catatttcca tagaaacgtg atgatattta cagcaatttt tatctattta tatgatttac
     6421 ttatatttaa attaactaag cggaaatttt gtttctgatg gaaactttat cgacctggca
     6481 caaaatcctc tttcagacat ccagaatgcc aaaaaatagt atgaaaattg tgctatcagc
     6541 taagaaaaaa ctaatccgca ataagaatgc gggttatttt ttgtgcgtaa atgttgcaat
     6601 gtaatattcc gtaacaggat gatcgttatg gcggggttgc aaatagattg cttgacttaa
     6661 caaacagata acttgacaga aaggataaaa aagagccagc aggcgctggc tctttgagga
     6721 agaaaatcag aagctggcgt tgcgcggagt acgtgggaac ggaatcacat cacgcacgtt
     6781 ttgcacgcca gttacgtaag caatcaggcg ttcaaaacca agaccgaaac ctgaatgcgg
     6841 aacagtaccg tagcgacgca gatcgcgata ccaccagtaa tcttctttat tcaggcccat
     6901 ttccagcata cgctcgtcca gaacgtccag acgttcttca cgctgggagc caccaatgat
     6961 ctcaccgatg cccggagcca gaacgtccat agccgcaacg gttttaccgt cttcgttgag
     7021 gcgcatatag aacgctttaa tatctttcgg atagttttta accactaccg gtgctttaaa
     7081 gtgttcttcc gccagataac gctcatgctc agaagagaga tcgacgcccc agtaaaccgg
     7141 gttttcaaac ttcctgccgc agttttcgag aatggtcact gcgtcggtgt aatccacctg
     7201 cgcgaaatcg gcctcaatga agcgttccag acgtgaaacg gcatctttat ctacgcgttc
     7261 agcgaagaat ttcatgtcgt ctgcgcgttc ttcgagaacc gctttgaaga catatttcag
     7321 catggcttca gccagacccg cgatatcgtt caggttagca aacgccactt ccggctccag
     7381 catccagaat tccgccaggt gacggctggt gttggagttt tcagcacgga aagtcgggcc
     7441 gaaggtataa attttggata atgcgcaagc gtaggtttcg ccgttcaact ggccagatac
     7501 ggtcaggaaa gactctttac caaagaagtc tttgtcgaaa tccactttgc cctgatcgtt
     7561 acgcggcagg ttttccagat ccagcgtaga aacgcggaac atttcgcctg caccttcggt
     7621 atcagatgcg gtaatcagtg gcgttgaaac ccagaagaat ccctgctcgt taaagaagcg
     7681 atgcagcgcc tgcgccagcg tatggcgaac gcgcgcgacg gcaccaatca ggtttgtgcg
     7741 cggacgcagg tgagcgactt cacgcagata ctcaatgctg tggcgttttg ccgccatcgg
     7801 gtaagtgtct ggatcttcaa cccaaccagc aacttcaact ttgctggcct gaatttcaaa
     7861 ttgttgcccc tggcccggcg acgccacgac tttacccgtc acaatgaccg agcagccggt
     7921 ggtcagacgc aggacgtctt cattgtaatt gggcagagaa ttattgatga cagcctgtac
     7981 aggatcaaag caggaaccgt cataaacggc gaggaaggag atgccagctt ttgaatctcg
     8041 gcgggtacgt acccatccgc gtacggtgac ttcgctgtca acggctacgc ggccctggag
     8101 tacgtcggct acaggcacaa cgctcataat attctctctg ttaatagtcg gaaaaaataa
     8161 acacttgtcc acccgtaaat ggggggatac ctatgttacc tggcatctgc aatcagacaa
     8221 gcagaattcg caaatgcagc gcaagatttc ggaattaaag gtaaaaaaag ggagccgatt
     8281 agctccctga tgatattaac tggctttttt aatatgcgga aggtcgaacg ctttgcgcag
     8341 cgcccgaaca aacgctttat catggcagat agttttgcca gggctgtcag aaagtttcgc
     8401 caccggttta ccgttacact ctaccaactt aatcacaata ttcaggggtt ttacctgggg
     8461 gatatcgcag gtcaggcgag tcccaatacc aaaacttaat tgcacgcggg aagagaagtg
     8521 gcggtatagc tcaaccgctt tgcgtaaatc cagattgtca gagaaaacca gcgttttact
     8581 ctgtggatca attcccagct ttttataatg tgcaatggct ttttcacccc attcaaccgg
     8641 gtcgccagag tcatgacgca ggccctgata ccgactggcg aactcgacac cgaaatcacg
     8701 caggaaagca tccatagtga tgcagtcggt taatgcaatg ccaagttggt cgggatattc
     8761 ttccagccag gcagcaagtg cagctcgctg gctgttggct aggtccgggc tgatttgctg
     8821 atgtgcctgg aaccattcgt gcgcctgtgt tcccatcggc gtgagggaaa gccgacgcgc
     8881 cagatcgtag ttgctggtgc ccacgaacca ggattcctgt tgcagacgct taacgatggt
     8941 ttcttgtact tcgcgagaaa aacggcgacg ggtgccaaaa tccatcagat ggaagcgcga
     9001 catatcaaga ccggcggtta acgccgagaa gtcgactaat ttgctttcca gcgtgtcgag
     9061 ggcttgcgca acgtcggcct gcggtgagcg atagcgatgt accatttcac tgataaccgc
     9121 cagcaaagga acttcccaga ggatgacttc acgccacgga ccgcttaagc gaatatccag
     9181 cttgccatta tcgttggaca cggtgacttg ttccgggtta aagcggaatt cgcgtaacca
     9241 gttaagatag tcggccttaa agaaaggcag ggcagagagc cactgatatt catcatcctg
     9301 caggcgcagg tgctgcatcg cctgaatctg ttcacgaata gcatcggcat aaatacccag
     9361 cagatcgtca cctcggcaac gaaactccgc cgcgacatgc acatcgtaat agtgatgaaa
     9421 cacggcttgc tgcatatgca acttataagc atctgtatcc agcaacgagt gcagaacagg
     9481 agaagcgaat tgtgtcatag gtgcgcagta gcatcctcgt acaggagcgt ttagtacaat
     9541 aaacatcttc aggaactgct ggagtatacc ttgtttcgca atttattgaa ccccgatcac
     9601 accatatgcc acctttctgg tcgatggcat tacgcggtgt atgttataaa aatgtagcaa
     9661 taaaggcgtt tgtacctgaa aagatgaaga ttctgcatag cgcgatttac gcaacaggaa
     9721 tagactgaac accagactct ataaaagatg ctaaaggtta tttatgactc aacagccaca
     9781 agccaaatac cgtcacgatt atcgtgcgcc ggattaccag attactgata ttgacttgac
     9841 ctttgacctc gacgcgcaaa agacggtcgt taccgcggtc agccaggctg tccgtcatgg
     9901 tgcatcagat gctccgcttc gtctcaacgg cgaagacctc aaactggttt ctgttcatat
     9961 taatgatgag ccgtggaccg cctggaaaga agaagagggc gcactggtca tcagtaattt
    10021 gccggagcat tttacgctta agatcgttaa tgaaataagc ccggcggcga ataccgcgct
    10081 ggaagggctt tatcagtcag gcgatgcgct ttgcacccag tgtgaagccg aaggtttccg
    10141 ccatattacg tattatctcg accgcccgga cgtgctggcg cgttttacca ccaaaattat
    10201 tgccgataaa accaaatatc ccttcctgct ttccaacggt aaccgcgttg cgcaaggtga
    10261 actggaaaac ggacgccatt gggtacagtg gcaggacccg ttcccgaaac cgtgctacct
    10321 gtttgcgctg gtggcaggcg actttgatgt actgcgcgac acctttacca cgcgttctgg
    10381 tcgcgaagtg gcgctggagc tgtacgtcga tcgcggcaac cttgatcgcg cgccgtgggc
    10441 gatgacctcg ctgaaaaact caatgaaatg ggatgaagaa cgcttcggcc tggagtatga
    10501 cctcgacatc tatatgatcg tcgcggtgga tttcttcaat atgggcgcaa tggagaataa
    10561 gggtttgaat atctttaact ccaaatatgt gctggcccgc accgacaccg ccactgacaa
    10621 agattacctc gatattgaac gcgttatcgg ccatgaatat ttccataact ggaccggtaa
    10681 ccgagtcacc tgccgcgact ggttccagct cagcctgaaa gaaggtttaa ccgtcttccg
    10741 cgatcaggaa ttcagctctg accttggttc ccgtgcagtt aaccgcatca ataatgtgcg
    10801 caccatgcgc ggattgcagt ttgcggaaga cgccagcccg atggcgcacc cgatccgccc
    10861 ggacatggtc attgagatga acaacttcta taccctgacc gtttacgaga agggcgcgga
    10921 agtgatccgt atgatccaca ccctgctggg cgaagaaaac ttccagaaag ggatgcaact
    10981 ctatttcgag cgccatgatg gcagcgcggc aacctgcgac gactttgtgc aggcgatgga
    11041 agatgcgtcg aatgtcgatc tctcccattt ccgccgttgg tacagccagt ccggcacgcc
    11101 gattgtgacc gtcaaagacg actacaatcc ggaaaccgag cagtacaccc tgaccatcag
    11161 ccagcgcacg ccagccacgc cggatcaggc agaaaaacag ccgctgcata ttccgtttgc
    11221 catcgaattg tatgacaacg aaggcaaagt gatctcgttg cagaaaggcg gtcatccggt
    11281 gaattccgtg ctgaacgtca cccaggcgga acagaccttt gtttttgata atgtctactt
    11341 ccagccggtg cctgcgctgc tgtgcgaatt ctctgcgcca gtgaaactgg aatataagtg
    11401 gagcgatcag caactgacct tcctgatgcg tcatgcgcgt aatgatttct cccgctggga
    11461 tgcggcacaa agcctgctgg caacctacat caagctgaac gtcgcccgac atcagcaagg
    11521 gcagccgctg tctctgccgg tacatgtggc tgacgctttc cgcgcagtgc tgctcgatga
    11581 gaagattgat ccggcgctgg cggcagaaat cctgacgctg ccttctgtca atgaaatggc
    11641 tgaactgttc gatatcatcg acccgattgc tattgccgaa gtacgcgaag cactcactcg
    11701 tactctggcg actgaactgg cggatgagct gctggctatt tacaacgcga attaccagag
    11761 cgagtaccgt gttgagcatg aagatattgc gaaacgcact ctgcgtaatg cctgcctgcg
    11821 cttccttgct tttggtgaaa cgcatctggc tgacgtgctg gtgagcaagc agttccacga
    11881 agcgaacaat atgaccgatg cgctggcggc gctttctgcg gcggttgccg cacagctgcc
    11941 atgccgtgat gcgctgatgc aggaatacga cgataagtgg catcaggacg gtctggtgat
    12001 ggataaatgg tttatcctgc aagccaccag cccggcggcg aatgtgctgg agacggtgcg
    12061 cggtctgttg cagcatcgct catttaccat gagcaacccg aaccgtattc gttcgttgat
    12121 tggcgcgttt gcgggcagca atccggcagc gttccatgcc gaagatggga gcggttacca
    12181 gttcctggtg gaaatgctta ccgacctcaa cagccgtaac ccgcaggtgg cttcacgtct
    12241 gattgaaccg ctgattcgcc tgaaacgtta tgatgccaaa cgtcaggaga aaatgcgcgc
    12301 ggcgctggaa cagttgaaag ggctggaaaa tctctctggc gatctgtacg agaagatcac
    12361 caaagcactg gcttgataaa taaccgaatg gcggcaatag cgccgccatt cggggaattt
    12421 acccctgttt tctcaggcga atttcagatt caccacgctg catcaccctt tgcaacactt
    12481 ccgattccag ctccgctaat cgcaccgacc ctaatcgacg cggacggggg atatccactg
    12541 tcaaatccag accaattttt ccctcttcaa ttaataacac ccggtcagcc attgctaccg
    12601 cttcgctcac atcatgcgtc accaacagta cggtaaagcc gtgctcctgc caaagtgaca
    12661 caatcaaatc ctgcatctcg agtcgcgtta aggcgtccag tgccccgagc ggttcatcaa
    12721 gcaacaataa acccggtcga tgaatcaacg ctcttgccag cgccactcgc tgtttctgcc
    12781 cgcctgaaag tgcggcaggc cattccccgg cgcgattctc cagtcctacc gcagccaacg
    12841 cccgacgcgc ggcatcgcgc cactggcctt taaggcctaa cccaacgtta tcaatcaccg
    12901 atttccacgg tagcagacgc gcatcctgaa acatcattcg cgtgtcttcc tgaatttcag
    12961 ccagcggtgt ggtgcctgcc aacacatcgc ctgcggttgg cgtttccagc ccggccagca
    13021 ggcgcagcag ggtacttttg ccaccaccgc cacaaactga cctgccggaa tatgtaaatc
    13081 cagttggttc aggacgatat tttccgcgta atgtttgctt actgcattga gcaacaatgg
    13141 tgtgccctgg ttcagacgag cagtattcat accgtggcct ccttcaaatg ataagccggg
    13201 ttccagcgca accagaggcg ctctaacagc tgcgcgctga cgtcagcaag tttgccgagc
    13261 agggcgtaaa gaataatagc gactaccacc acgtccgttt gcaaaaactc tcgcgcattc
    13321 atcgccagat aaccaatgcc ggaattggca gaaatggttt cggcaacaat cagcgtcagc
    13381 cacatcaggc ccaacgcaaa acgcacgccg accataattg agggcagggc accaggcagg
    13441 atcacatgga taaacagcgg tatgccggat aacccatagc tacgcgtcat ctccaccagc
    13501 ccgcgatcga tattacggat gccatgccag gtgttgatat aaatgggaaa cagcgtaccg
    13561 agcgccacca gaaagatttt tgcggattca tcaatgccaa accacaaaat caccagcggg
    13621 atcagcgcca gatgcggcac gttgcgcaac atctgaattg aggtatccag cagccgttct
    13681 ccccagcgag atagcccgct aatcagtccc aaaatcaacc ccagcgatcc gccaattgaa
    13741 aagccaatca gcgcccgcta ggaactgatc gccagatgct gccacagttc gccgctggcg
    13801 gagagcgtcc agaacgccgt caccacccct tccggtgagg gcaaaatacg cgtcgacagc
    13861 cagccaactg aggaggccag ttgccacacc gccacgatgc ccaccggtaa aaaccagggg
    13921 gcaacgcgca ataaccactt cttcactggc gttgccatta tttcttcctt agctttgcgc
    13981 gactttacgg gggataaaat cattcgccac cgcttcgcct tgcggattca gcggctgcgg
    14041 ctggggaatt tccggaatgg cgacatccag atgtgggaac agcaactcgc cgacccgata
    14101 cgcttcttcc agatgcggat agcccgaaag cacaaagctg tcgatgccaa gcgcggcgta
    14161 ttcgttgatt cgcgcagcga ccgtaggacc atcgcccacc agcgccgttc cggcaccgcc
    14221 gcgcactaag ccaacgcccg cccataaatt ggggctgatc tccagattgt cgcgcttgcc
    14281 gttatgtaac gccgccattc gctgttgtcc tacggaatcc gtccgggcga atgcggcctg
    14341 tgctttggcg atagtttcat catcaagatg cgagattaac cgctcggcgg cctgccacgc
    14401 ttcgtcgtta gtttcacgaa caatcacatg cagacgaata ccgaaacgaa ttttgcgtcc
    14461 atgcgcggca gctttcgccc gcacttgttc gatcttctct tttactagtt ctggcggttc
    14521 gccccaggtg aggtagagat caacttgttc tgccgccagc tcctgggcga cgtctgacga
    14581 tccgccaaag taaagcggag gataaggctg ttgaatcggc gggaagagca gttttgctcc
    14641 gcgcacatga atatgtttac cgttgaaatt gacggtttcc cccagcaata agcgccgcca
    14701 gacctaggta aattccgccg aggcttcgta gcgctcgcta tgatcaagga acacgccgtc
    14761 gcctgccagc tcttgtggat cgctgcctgt gaccagatta aacaacgcac gaccatttga
    14821 gagacggtca agcgtggcgg cctggcgagc ggcaacggta ggtgaggtta cgctggggcg
    14881 cagggcgaca agaaacttca gccgctgcgt caccgggatc atcgacgccg ccaccagcca
    14941 cgcatcttca cacgatcgcc ccgttgggat cagcacaccg gtatagccca gacgatccgc
    15001 cgcttgcgca atttgttgca gataaccgtg atcaaccggg cgtgaacctt cttccgttcc
    15061 cagatagtgc ccgtcaccgt gggtcggtaa aaaccagaac atattcagac tcataattgt
    15121 tttccttcca gttgagtggg ctgccagatg cgctggcgaa tatcgacttt tttcggcacc
    15181 agacgatttt cataaaacag atctgccgtt tgctgctgta aggcggcaac ctcggcgtta
    15241 accggtttga tggtggtagg agggcgatga tctaagtaag aggcaatcac cggtgccggt
    15301 aagcccatcg tttttgccag taaagcgatg ctttgctcgc gctggctgcg ggttaacgca
    15361 tcggcctcac taaaggttgc cagtacgccc tgaataaaag cgccgttttt ttctgcatag
    15421 ggacgagctg ccagataaaa cgatccagtt tgattgagat cggtgccgtc tttcagcacc
    15481 cgcacgccgc cctgtaataa tgcagcagag tagtagggat cccagatagc ccaggcgtca
    15541 acgttacctt gctggaacgc ggcgcgggca tcagcgggcg ttaggtaagt gggttggata
    15601 tcggtaaact taagtccggc ctgacgcagt gcacgcagta aaaggttgtg tgaactggaa
    15661 cctttctgaa aggcaacttt gtgaccttta agatcggcta cggttttgat cgggctgttt
    15721 tctgccacca gaatcacttc ggctttgggc ttcggtggct cgacgctcac atataccaaa
    15781 tcagccccgg cagcctgggc aaagattggc ggaatatccc cggtactgcc gagatcaata
    15841 ctgccaacgt ttaaggcttc caacatttgc ggacccgcgg ggaactccac ccaggagatt
    15901 tttgattgcg gatagcgttt ttccagtaac tggtggcttt ttgccagtac cataccaata
    15961 ctgcctttct gatagcctat acataacgct tcaggcgagg attctgcagc aaccgcaatc
    16021 gtagagacgc taagcaatcc caccagcgcc agtttaatga tgttacgcat gggcattacc
    16081 tcgcagagac agaaggtcag gaacctgaac atcgcggcgg tgcaatgcct gccagaaagt
    16141 ttctagcgcg gtatcaagac gggtttgcag atttggcgtg aactggggtc tgtgatggta
    16201 atcaattact tgtgagtcat cggcaaacac gccgtgcagg atctcctgag ctttcagtgc
    16261 gcttaaaact ggtttaaggg cataatcgac cgccagcaga tgggccacgg taccgcccgt
    16321 cgccagcggt agcaccactt tgccttgcaa agcgcgctct ggcagcaggt cgagcagggt
    16381 tttcagcgcg ccggaatagg cggctttata cacaggtgta gcgactatca gtccatcagc
    16441 ctgttgcagc tgttcggtga aggtcttgag tgccggacta tcgaaacgag cataaagcag
    16501 atcttccggg gcgaagtttt gcagattcca gtgataaacc tctacatcca gtccatttag
    16561 tttttcccgc gcatattcca gcaaggagct ggagcgagaa ggaaagcgag gactacccgc
    16621 cagggtgatg acacgcatac tctctcctta taaccaattg ttcttttttt gttaacattg
    16681 ataacaattc ggtcagtctg tcggagagac aagaaaatgc caaatataaa ttttgtgtat
    16741 ctttttctga aaataaacta aagaaagggc tttatatatc acgcatattt atttgttgga
    16801 tagtcattag atgttgaatc aatgaattac tcgttcagtt aatatttaaa tattcatgaa
    16861 atctataaat taaagatttg tcacttattg gatttagtat gcttgattta aatggcggtc
    16921 aattattgtt attattaagt ctaatgtcat ttaaaggcat tatcatattt acgaagagat
    16981 caggatgatg acgatgaaaa aaagtgtatt gacggcgttt ataactgtgg tatgtgcaac
    17041 gtccagcgtt atggcagctg atgataatgc tatcacggat ggcaaagtaa catttaatgg
    17101 taaagttatt gctccagctt gtaccctggt agctgcgacg aaagattcag tagtcacatt
    17161 gccaaatgtc agcgccacca agttgcaaac taatggagca gtctctggcg ttaaaactga
    17221 tgtaccaatt gccttagaag gctgtgatgt tactgtaact aaaaatgcga cgtttacctt
    17281 tagtggtacg gctgacggcg tgcaacctac agcatttgcc aaccaggcta ccaccgatgc
    17341 agcgacgaat gttgctctac aaatgtatct gccagatggt tctacatcgg taactcccgg
    17401 taccgaaacg tcgaatattc agttagcgga ttctgctgag caaacagtga cctttaaagt
    17461 tgattatatc gctacgggga aagcgacttc tggtaatgtg aatgcggtaa caaatttcca
    17521 tattaactat tattaataga actcattaat tgttttatta attagtaccc ctctagtctt
    17581 ctggagggga tattcatatt ttttaagagt gactatttat gaaaacttgc ataacaaagg
    17641 gaattgtgac cgtaagttta acggcaatat tactcagctg ctcatccgca tgggcggcag
    17701 gtaaaggcgg gattggactt gcagcaacac gtcttgttta ttcagaaggt gaagagcaaa
    17761 tttcactggg tgtacgtaac accagtccgg atgttcctta tcttattcag tcatgggtga
    17821 tgaccccaga taataaaaaa tcagcagatt ttattattac accaccgcta tttgtgctga
    17881 atccggctaa tgagaatctg ttacgcatta tgtacattgg tgcgccgttg gcgaaagaca
    17941 gagaaaccct tttcttcact agcgtacggg cagtcccttc aacaacgaag cgggaagcgg
    18001 gaagagggaa ataccctgaa gattgccaca caaagcgtca tcaaactttt ctggcgacca
    18061 aaaggtttag cgtatccctt aggcgaggct ccggcgaaac tgcgttgcac ttcgtcagct
    18121 gacatggtta cggtcagtaa cccaacacct tatttcatta ccctgacaga cctgaaaata
    18181 ggtggaaaag tagttaaaaa taaaatgatt tccccctttg ataaatacca attttctctg
    18241 ccaaaggggg ccaaaaatag cagcgtaacg tgtcgaacca tcaatgacta cggggcggaa
    18301 acgccgcaac tcaactgtaa atcgtaagcc gtcttcagtt aagagagcga gatgtataga
    18361 actcatcgac aacacagcct gttaagctct ggtggagtgc catcgtttat tggggggctg
    18421 gtggtgtttg tgtcggcagc gttcaatgca caagctgaaa cctggttcga tcctgctttt
    18481 ttcaaagatg atccctcaat ggtggccgat ttgtctcgtt tcgaaaaagg acaaaaaata
    18541 acgccagggg tttatcgtgt cgatattgtt ctgaatcaga caattgtaga tacgcgcaac
    18601 gtcaattttg ttgagataac gccagagaag gggattgccg cctgtttgac gactgaaagc
    18661 ctggatgcaa tgggtgttaa tactgatgcg tttccggctt ttaaacaact ggacaaacaa
    18721 gcgtgtgtgc cattggcgga gattattccg gatgccagcg taacgtttaa tgtgaataaa
    18781 ctccgtctgg aaatttcagt accgcaaatc gccatcaaaa gtaatgcccg tggttatgtc
    18841 ccccctgaac gttgggatga agggatcaac gcgctattac tgggatattc gtttagcggg
    18901 gctaacagta ttcatagcag cgcagacagt gattctggcg acagctattt tctgaattta
    18961 aacagtggcg ttaatttagg cccatggaga ttgcgcaaca attcaacatg gagtcgcagt
    19021 agtggccaaa ccgcagaatg gaagaatctc agcagctatt tgcagcgggc ggttattcca
    19081 ctaaaaggcg aactgaccgt aggtgatgat tatactgcag gcgatttttt cgatagtgtc
    19141 agctttcgtg gtgtgcagct ggcgtcagat gacaacatgc tgccagacag cctgaaaggg
    19201 tttgcgcctg tggtgcgtgg tatcgccaaa agcaatgccc agataacgat taagcaaaat
    19261 ggttacacca tttaccaaac ttatgtatcg cctggtgctt ttgaaattag tgatctctat
    19321 tccacgtcgt cgagcggtga tttgttagtt gaaatcaaag aagcggacgg cagcgtcaat
    19381 agctacagcg taccgttttc cagcgtgcca ttactccagc gtcaggggcg aatcaaatac
    19441 gcggtgacac tggcgaaata cagaaccaat agtaatgaac agcaggagag caaatttgcc
    19501 caggccacgt tgcagtgggg cggaccgtgg ggaacgacat ggtatggtgg tggacaatat
    19561 gctgaatatt accgtgccgc catgtttggt ctgggattta accttggcga tttcggagca
    19621 atttcgttcg atgcgaccca ggcgaagagt acgctggcag accaaagcga acataaaggt
    19681 cagtcatatc gttttctgta tgccaaaacg ctcaaccaat tgggcactaa ttttcaactg
    19741 atgggctatc gctattcgac gtcgggtttc tacacccttt ccgacaccat gtataaacat
    19801 atggatggct acgaatttaa tgacggtgat gatgaagata cgccgatgtg gtcgcgttat
    19861 tacaatttgt tttacaccaa acgtggcaaa ctgcaggtca atatctccca gcaattaggc
    19921 gattacggtt cgttttattt aagtggtagc cagcaaactt actggcatac cgatcaacag
    19981 gatcggctat tacagtttgg ctacaacacg caaattaaag atctctcgct gggggtttcc
    20041 tggaactaca gtaagtcccg tggtcaacct gatgctgatc aggtgtttgc actaaatttt
    20101 tccctgccgc tcaatctgtt gctccccaga agtaatgata gctataccag gaaaaaaatt
    20161 acgcctggat gacctctaac accagtatcg ataacgaagg gcacattaca caaaacctgg
    20221 gtttaacgga gacactactc gatgacggta acctgagcta cagcgtgcaa cagggatata
    20281 acagcgaggg gaaaacggct aatggtagcg ccagcatgga ctacaaaggg gcgtttgcag
    20341 atgcccgagt gggctacaac tacagcgata acggcagtca acaacaactg aactacgctc
    20401 tttcaggcag tttagttgcc cattcacagg gcattaccct ggggcaatcg ctgggggaaa
    20461 ctaacgtgct gattgcagca ccaagcgcag agaatactcg tgtggcgaac agcaccgggc
    20521 tgaaaactga ctggcgcgga tataccgttg tcccctatgc cacttcttat cgggaaaatc
    20581 gaatcgcact tgatgcggca tcgttaaaac gtaacgtgga tcttgaaaat gcagtagtca
    20641 acgtggttcc caccaaaggg gcgttggttc tggcggagtt caatgcccat gcgggagcaa
    20701 gggtattaat gaaaacatca aagcagggta taccgctgcg ttttggcgcg atagcgacgc
    20761 tggacggcat acagactaat agcggcatta ttgatgatga tggctcgctc tatatgtccg
    20821 gtttgcccgc tcagggagcg ataactgtac gctggggcga agctcccgat caaatttgtc
    20881 atatcagtta ccagcttacc gaacaacaaa ttaactctgc gattacgcga atggatgcca
    20941 tatgcagata atctttggag aaaaatgcgt gttattacta cgactatttt ttgccgccgt
    21001 cttaatgcta tggtgcgctc aaactgctgc ttatagcggg cagtgtcata ccactcaggg
    21061 gaatccgtat attggcgtca attttggcgt taaaaccctg gaggaagaag aaaatacggc
    21121 tggagtagtt aaagacaaat tttatcagtg gaacgaatcg aatgattatt atgtttcctg
    21181 tgattgcgat aaagacaatg tcagaagtgg ccgatgggca ttcgccgcgg attcaccgtt
    21241 agtctattta ggcgacaact ggtacaaaat taatgactat cttgccgcca aagttttatt
    21301 gcaggttaaa ggcagttctc ctactgcggt tcctttcgaa aacgtgggca caggggcaga
    21361 tacacgatgg catatttgcg atcccggcgg tcaacgttta ggtggccagg gggctagcgg
    21421 taatagcggt agcttttccc tgaaaatatt gcagccgttc gttggttcgg tcgtcattcc
    21481 tcctatggcg ctggcgcgat tatttgaatg ctacaacata cccgcaggtg attcctgcac
    21541 gactacaggt acaccggttt tagtgtatta cctgtctggt actatcaatt cacttggctc
    21601 atgttccgtc aatgccggag aaacaatcga ggtcgatctg ggcgacgtat ttgcggctaa
    21661 ctttcgtgtt gtagggcata agcctcttgg ggccagaacg gcagaacttg caattccagt
    21721 caggtgtaac acgggaaacg cggggttagt taacgtcaac ctgagtctga cggcaactac
    21781 agaccccagc tatccccagg cgattaagac gtcacgtcct ggcgtgggcg tggtggtgac
    21841 cgatagccag aacaacatta tttcccctgc tggtggaaca ttaccgctct ctattcctga
    21901 tgatgcagac agtatcgcgc gaatgaatgt ctatccagtc agcacgacag gtgtaccacc
    21961 agaaaccggg cgatttgaag ccacggcaac ggtgagaata aattttgatt aacgcgtgaa
    22021 cgtatgaaga aaaaaacgat atttcagtgc gttatcttgt tctttagcat tcttaacatc
    22081 catgtcggga tggctgggcc tgaacaagtt agtatgcata tttatgggaa tgtggtcgat
    22141 cagggctgtg atgtcgccac caaaagtgca ttacaaaata ttcatattgg tgattttaat
    22201 atcagtgatt ttcaggctgc gaataccgta agcactgctg ctgatttgaa tatcgatatc
    22261 accggttgtg ccgctggtat tactggcgcg gacgtccttt ttagcggcga ggctgacacc
    22321 cttgcgccga cactgctcaa actaactgac acaggcggaa gcggtggtat ggcaacgggg
    22381 attgccgtgc aaattcttga tgcgcaaagt cagcaagaaa tcccgctcaa tcaggtccag
    22441 cctcttacgc ccttaaaagc cggggataac acactcaaat atcaacttcg ttataagtcc
    22501 acaaaggcgg gagcaacggg cggtaatgcg acggcggttc tctattttga tctggtttac
    22561 cagtgaagga gtgatgttga aacggataat ctggattctg ttcttactgg gattaacggg
    22621 gggctgtgag ctatttgccc atgatggcac ggtcaacatt agcggatcgt ttcgccgtaa
    22681 tacatgcgtg ctggcacagg atagcaagca aatcaatgtg cagttaggcg atgtctcgct
    22741 gacacgtttt tttcatggga attatggccc ggagaaatct ttcatcatta atttgcagga
    22801 ttgcggaaca gatgtcagca cggttgacgt caccttttca ggaacccccg acggagtgca
    22861 gagcgaaatg ctgtccattg aaagtggtac ggatgcagcc agtgggctgg caattgcgat
    22921 tctggatgat gcgaagatat tgattccgct taaccaggcg agtaaagact acagcctaca
    22981 tagcggtaag gtgccattaa ctttttatgc gcaattgcga cctgtcaata gcgatgtgca
    23041 gtcgggtaaa gtgaatgcca gcgcgacatt tgtacttcat tatgactaat acgtggaaca
    23101 gattggcgct cttgattttc gccgttttat cgctgctggt ggcgggtgaa ttgcgggcag
    23161 gagtggtggt cggcggaacg cgatttatct ttccggcaga cagagaatcg atatctattt
    23221 tactgactaa taccagtcag gaatcctggc tgattaacag taaaatcaac cgcccaacgc
    23281 gttgggccgg ggggggacgc gtcgacagtg ccagcaccat tactggccgc tccgccactt
    23341 attctcctga agcccggtac tacaggcacg ttgcgcttgc tgagaacgga aagcgacatc
    23401 ttgcctgtgg atcgcgaaac gctatttgag ttaagcattg ccagcgtgcc atccggcaaa
    23461 gttgaaaatc agagcgtaaa agtggcgatg cgctcggtat ttaaactgtt ctggcgaccc
    23521 gaaggtttgc cgggcgaccc gctggaagct tatcaacaat tacgctggac acggaattcg
    23581 cagggtgtac aactcactaa cccaacgcct tactacatta acctgattca ggtgagcgta
    23641 aatggtaaag cgttaagtaa tgcgggagtt gtgccgccta aaagccagcg tcagacaagc
    23701 tggtgtcagg caatcgcacc gtgtcatgtc gcctggcggg cgataaatga ttacgacggg
    23761 ttgagtgcaa agaaggagca aaatctgccc tgaaacaggt tcggaaaacg tttgcgtttt
    23821 ttttgccgca ggtcaattcc cttttggtcc gaactcgcac ataatacgcc cccggtttgc
    23881 acaccgggaa tccaggagag ttcatgtact accccttcgt tcgtaaagcc cttttccagc
    23941 tcgatccaga gcgcgctcat gagtttactt ttcagcaatt acgccgtatt acaggaacgc
    24001 cgtttgaagc actggtgcgg cagaaagtgc ctgcgaaacc tgttaactgc atgggcctga
    24061 cgtttaaaaa tccgcttggt ctggcagccg gtcttgataa agacggggag tgcattgacg
    24121 cgttaggcgc gatgggattt ggatcgatcg agatcggtac cgtcacgcca cgtccacagc
    24181 caggtaatga caagccgcgt ctctttcgtc tggtagatgc cgaaggtttg atcaaccgta
    24241 tgggctttaa taatcttggc gttgataacc tcgtagagaa cgtaaaaaag gcccattatg
    24301 acggcgtcct gggtattaac atcggcaaaa ataaagatac gccagtggag cagggcaaag
    24361 atgactatct gatttgtatg gaaaaaatct atgcctatgc gggatatatc gccatcaata
    24421 tttcatcgcc gaatacccca ggattacgca cgctgcaata tggtgaagcg ctggatgatc
    24481 tcttaaccgc gattaaaaat aagcaaaatg atttgcaagc gatgcaccat aaatatgtgc
    24541 cgatcgcagt gaagatcgcg ccggatcttt ctgaagaaga attgatccag gttgccgata
    24601 gtttagttcg ccataatatt gatggcgtta ttgcaaccaa taccacactc gatcgttctc
    24661 ttgttcaggg aatgaaaaat tgcgatcaaa ccggtggctt aagtggtcgt ccgcttcagt
    24721 taaaaagcac cgaaattatt cgccgcttgt cactggaatt aaacggtcgc ttaccgatca
    24781 tcggtgttgg cggcatcgac tcggttatcg ctgcgcgtga aaagattgct gcgggtgcct
    24841 cactggtgca aatttattct ggttttattt ttaaaggtcc gccgctgatt aaagaaatcg
    24901 ttacccatat ctaattattt cttcgaattc ctctttataa gataatcagg gctttatttt
    24961 cagccctggt tgttttatat tcatcgctgt tgcttattta gacattttgt acttttattg
    25021 ttgaggttat taagcgaagc gacaatggat tgtgttgctg cggttttata gggtagggga
    25081 gaggcagatg cgaattaaac cagacgataa ctggcgttgg tattacgatg aagagcacga
    25141 tcgaatgatg ctcgatttag ccaatggtat gctgtttcgc tcacgttttg cgcgcaagat
    25201 gttgactcca gatgcctttt ctcccgcagg cttttgcgtt gacgacgccg cgctctattt
    25261 ctcttttgaa gaaaagtgcc gcgattttaa tttatctaaa gaacaaaaag ccgaactggt
    25321 gctgaatgca ctggtagcaa ttcgctatct caaaccgcaa atgccgaaaa gctggcattt
    25381 tgtttcccat ggtgaaatgt gggtgcccat gccgggcgat gcggcctgcg tttggttgag
    25441 cgatactcac gagcaggtca atttgctggt cgttgaatct ggcgaaaatg ccgcactatg
    25501 cctgctggca caaccctgcg ttgttattgc gggtcgcgcg atgcagttgg gcgacgccat
    25561 taaaatcatg aacgacaggc tgaaaccgca ggttaatgtt gacagcttca gcctcgaaca
    25621 ggcagtctaa cgcgccaact taagtgcagt cttcggtaca cagctacagc aaagaatggt
    25681 gccatcatcg cccattgctg attttttcag cggcgagact tcgccttcta aaatctgaac
    25741 acggcaactt ccacaaatgc ccgcgcggca agaataaggg atacgaattc cctgattttc
    25801 taattgctcc agcaacacct gttggttatt tccacgaaat gcctgtccct gccagtcaat
    25861 atctacattt gcgtccggtt gttgcgtgat gttggcggta tcatcagcgg cagctgcgcc
    25921 gtaaattttt gccggagccg ttgccagaat ttccacctca tcgccaacgc gaatcacgcc
    25981 gctattacgg gcaattaaat tctgaccaaa atcgacatcg ccgttatcct gggcagtgcg
    26041 gaaagattgc aatgttttta atggttcgcc tgccggatgt ttttgccctt tttctgggct
    26101 gacggtggtg aaaatacagc ggctacaagg tttaaccaca tcaaacacca catcaccaat
    26161 gcgaatcact ttccagcgat cttcttccca ggctgacgcg ccggaaacca ccagattggg
    26221 gcggaattgc tccattttta cactggccgg acaacgttgt tggagatcac gtaacgaggc
    26281 ttcgttagca agaaggtaag gatagccatc agcaaatgac agaggtacag tgttgtggcg
    26341 tttcacgcgc cgggtcattt gtggccccac ccagcgtaat tgcacttcgc gggagaaaaa
    26401 tccacttagc catttgttga tcgcgtctgg cgcaattcgc gcggtaaaat gtgtgcccca
    26461 aacttcggtt ggtgcgtctt gtgtggcgaa atcagcaaaa cgaacatatg cgctactgcc
    26521 atctggtgcg gtgagatgca agccatcatg cacaggtgaa ggagtaaacc gtaccatctg
    26581 gggaaactgg cgagcggtaa taaacgtacc gtcaggttcc gtgatcataa agatgcgatc
    26641 gaaggccaga ccactgacat cagccagagc atgtgtaaga ccaatgccgc gcatcgattt
    26701 aacaggatga ataaaaagcc gggttaatgt cgccacggtg cggtcctcaa atgaaaataa
    26761 gccctcaact ttatgacatg acgtgcttat tagctataat gcgcaacaat tttcttagcg
    26821 cctgtcccat taggctattt tatttgtcag tttggccctg ggttgtgctc gaaatcctca
    26881 cgtacttgtg tacgctccgg tttctccgcg ctgtccatgt ccagactgac tgcaacaatt
    26941 acgcctactg cggtaggctc ttagagtaaa agtgacgata tgaattctct gtttgccagt
    27001 acggcccgtg ggctggaaga gctgttaaaa actgaactgg aaaacctggg ggccgttgaa
    27061 tgccaggtgg ttcagggtgg ggtccatttc aagggcgaca cacggcttgt ttaccagagc
    27121 ctgatgtgga gccgcctggc ctcgcgtatt atgttgccgc tgggcgagtg taaggtttac
    27181 agcgatttag acctctatct cggtgttcag gcgatcaact ggacagagat gtttaatcct
    27241 ggcgcgacct tcgctgtcca cttcagtggt ttgaatgaca ccatccgcaa cagtcagtac
    27301 ggcgcgatga aagtgaaaga cgcgatcgtc gatgctttca cgcggaaaaa tctgccgcgt
    27361 ccaaatgttg atcgcgatgc gccggatatc cgcgttaacg tctggctgca taaagaaacc
    27421 gccagtatcg ctcttgatct gagtggtgat ggtttacatc tgcgtggcta tcgcgatcgt
    27481 gctggtattg cgccgatcaa agaaaccctg gcagccgcta ttgtgatgcg atccggctgg
    27541 cagcctggaa caccgctgct cgatccgatg tgtggttccg gtacgttgct gattgaagcg
    27601 gcgatgctgg cgaccgatcg cgcacccggc ttgcaccgtg ggcgttgggg ctttagcggc
    27661 tgggcgcagc atgatgaagc tatctggcag gaagtgaaag cggaagcgca aactcgcgcc
    27721 cgtaaaggcc tggctgagta tagctctcat ttttacggtt cggacagcga cgcacgggtg
    27781 attcaacgtg cacgcactaa cgcccgtctt gcggggattg ctgaactgat cacctttgag
    27841 gtgaaagatg tcgcgcaact gaccaatccg ctgctgaaag ggccgtacgg cacagtgttg
    27901 agcaacccgc catacgggga acgtctggac agcgaaccgg cgctgattgc gctgcatagc
    27961 ctgctgggtc ggatcatgaa aaaccagttt ggtggctgga atctctcttt gtttagtgcc
    28021 tcgccggatc tgctaagctg cttgcagctg cgtgcagaca aacagtacaa ggcgaaaaac
    28081 ggcccgctgg actgcgtaca gaaaaattac cacgttgccg aaagcactcc tgacagcaaa
    28141 ccggcgatgg tagcggaaga ctacgccaac cgcctgcgta agaacctcaa aaaattcgag
    28201 aagtgggctc gccaggaagg aattgaatgt taccgcctgt atgacgccga tctgccggaa
    28261 tataacgttg ccgttgaccg ttattccgac tgggtggtgg tgcaggagta tgcaccgcca
    28321 aaaactattg atgctcacaa agcgcgtcag cgtctgttcg atattatcgc tgcaaccatt
    28381 tcggtactgg ggattgcgcc aaacaaactg gtgctgaaaa cccgtgaacg ccagaagggc
    28441 aaaaaccagt accagaaact gggcgagaag ggcgagtttc ttgaagttac cgaatataac
    28501 gctcacttgt gggtgaacct gacggattat ctcgatactg gtctgttcct cgatcaccgt
    28561 atcgcccgcc gtatgctcgg tcagatgagc aaaggcaaag atttcctcaa cctgttctct
    28621 tataccggta gcgccaccgt gcatgcggga ttaggcggcg cgcgcagcac caccaccgtg
    28681 gatatgtcgc gtacttatct ggagtgggca gaacgcaacc tgcgtctgaa tggcctaacc
    28741 gggcgtgcgc atcgcctgat tcaggccgat tgcctggcgt ggctgcgtga ggcaaatgaa
    28801 cagtttgatc tgatctttat cgatccgcca accttctcta actcaaaacg aatggaagat
    28861 gcgtttgatg ttcagcgcga tcatctggcg ctgatgaaag atttgaaacg tctgctgcgt
    28921 gcaggtggga cgatcatgtt ctcgaacaac aaacgtggct tccgtatgga tctcgacggc
    28981 ctggcaaaac tgggactgaa agcacaagaa attacgcaaa aaacgctctc ccaggatttc
    29041 gcccgtaacc gccagatcca caactgctgg ctgattaccg cagcctgaaa ggaatagtaa
    29101 tgtcattaat cagtatgcat ggcgcatggc tgtcgttcag cgacgcgccg cttctcgata
    29161 acgcagaact gcatatcgaa gataacgaac gtgtttgtct ggtgggccgc aacggcgcgg
    29221 gcaaatcgac gttaatgaaa atcctcaacc gtgaacaagg gctggatgac ggtcgcatta
    29281 tttacgagca agatttgatt gtagctcgtc tgcaacagga tccgccgcgt aacgttgagg
    29341 gtagcgttta tgatttcgtt gccgaaggca ttgaagaaca agcggaatat ctgaaacgct
    29401 atcacgatat ttcgcgcctg gtgatgaacg acccgagcga gaaaaatctc aacgaactgg
    29461 cgaaggttca ggaacagttg gatcaccaca acctgtggca gctggaaaac cgcatcaacg
    29521 aagtgctggc gcaactgggg ttagatccta atgttgcgct gtcgtcgctt tccggcggct
    29581 ggttgcgtaa agcggcatta ggacgcgcgc tggtgagtaa tccgcgcgtg ctgttgcttg
    29641 atgaaccgac aaaccacctg gatattgaaa ccatcgactg gctggaaggg ttccttaaaa
    29701 ccttcaatgg gacgattatt ttcatctccc acgaccgttc gtttatccgc aatatggcga
    29761 cgcgcattgt tgatctcgat cgcggcaagc tggtgaccta tccagggaat tacgaccagt
    29821 acctgcttga aaaagaagaa gccctgcgcg tggaagaact acaaaatgcc gagttcgatc
    29881 gcaaactggc gcaggaagag gtgtggatcc gccaggggat caaagcacgc cgtacccgta
    29941 atgaaggccg cgtacgcgcc ctgaaagcaa tgcgtcgcga gcgtggtgaa cgtcgcgaag
    30001 tgatgggtac cgcaaagatg caggtggaag aggccagccg ctccggtaag atcgttttcg
    30061 aaatggaaga cgtttgctac caggttgacg gtaagcaact ggtgaaagat ttttcggccc
    30121 aggttctacg tggcgacaaa attgtcctga ttggtccgaa tgggtgcggc aaaaccacgc
    30181 tgctgaaact gatgctcggt cagcttcaag cggacagcgg gcgtattcac gttggcacca
    30241 aactggaagt ggcttatttc gatcagcacc gcgcggaact ggatcccgat aaaacggtga
    30301 tggataacat tgccgaaggt aagcaagagg tgatggttaa cggcaagcca cgccacgtat
    30361 tgggctattt gcaggacttt ctgttccatc cgaaacgggc gatgacgccg gtacgtgcgc
    30421 tttctggcgg tgagcggaac cgcttgctgc tggcgcgttt gttcctcaaa ccaagcaact
    30481 tattgattct tgacgaaccg accaacgatc ttgatgtcga aacgctggaa ctgctggaag
    30541 aactgatcga cagctatcag ggcacggtat tgctggttag ccacgatcgt cagtttgtcg
    30601 ataacaccgt tacagaatgt tggatcttcg aaggcggcgg taaaattggt cgttatgtcg
    30661 gcggttatca tgatgcccgt ggtcagcaag agcagtatgt ggcgctcaaa cagcctgcgg
    30721 tgaaaaaaac cgaagaagcc gccgcggcaa aagcagaaac tgtaaaacgc agcagtagca
    30781 aactaagcta taaattgcag cgcgaactgg agcagctacc gcaattgctc gaagatctgg
    30841 aggcgaagct ggaagcccta cagacgcagg tggcggatgc ttccttcttc agtcagccac
    30901 atgagcagac acaaaaagtg ctcgccgata tggctgctgc agagcaggag ctggagcaag
    30961 cctttgaacg ctgggagtat cttgaagcgt taaaaaatgg tggctgatcg caaaatagtc
    31021 gatttaaaca gagacagctg acaacggtaa aattgcctga tgaactgggt ttatcaggca
    31081 tgaaaaccaa ctctttgtta gtcatctgta aaatagcgca tcattaagga gtaccaatgt
    31141 gcgaacatca tcatgccgcg aagcacatcc tgtgctcgca gtgtgacatg ctggtggcgt
    31201 taccgcgcct tgagcatggt cagaaagcgg catgtccccg gtgtggcaca acgttaaccg
    31261 tggcgtggga tgcccctcgg cagcgtccga ccgcctatgc gttggctgca ctgttcatgc
    31321 tgttgctgtc caacttgttt ccttttgtga atatgaacgt tgcaggagtt accagtgaaa
    31381 ttacattact ggaaattccc ggcgtgcttt tttctgagga ctacgccagc ctcggcacct
    31441 ttttcctgtt gtttgtgcaa ctggttccct cgttttgtct gataaccatt ctgttactgg
    31501 tgaatcgcgc ggaattaccg gtccgtttaa aagagcaact ggcacgggtg ctttttcaac
    31561 tcaaaacctg gggaatggcg gagattttcc tcgcgggtgt gctggtcagt ttcgttaaac
    31621 tgatggctta cggcagcatt ggggtaggca gcagctttct cccctggtgt ttattttgtg
    31681 tcctgcaact gcgcgctttt cagtgcgttg atcgtcgctg gttatgggac gacatcgccc
    31741 cgatgccaga actgcgccag ccgctaaaac caggcgtcac ggggatacgt caggggctgc
    31801 gttcgtgctc ctgttgtacg gcaatccttc ctgctgatga acccgtgtgc ccgcgttgta
    31861 gtaccaaagg gtacgttcgg cgtagaaaca gcctgcagtg gacactcgcg ctgcttgtaa
    31921 cgtccatcat gctgtatctt ccggctaata ttttgcccat catggtgacg gatttattag
    31981 gctcgaagat gccgtcgacg attctcgctg gggtcattct gttatggagc gaaggctctt
    32041 atcccgtcgc tgcggtgatc tttctggcca gtattatggt gccaacgtta aagatgatcg
    32101 ccatcgcgtg gctgtgttgg gatgccaaag ggcatggcaa gcgcgacagt gaaagaatgc
    32161 atttgattta tgaagttgtt gagtttgtag gccgctggtc gatgattgac gttttcgtta
    32221 tcgcggtgct ctcggcgctg gtgcgtatgg gaggtttaat gagtatttat ccggcaatgg
    32281 gtgcattaat gtttgcttta gtcgtcataa tgacaatgtt ttctgctatg acgtttgacc
    32341 cgcgtttgtc gtgggatcgt caacctgaat cagagcatga ggagtcctga cagtatggaa
    32401 tctaataatg gggaagccaa aatccagaaa gtgaagaact ggtctcccgt gtggatattt
    32461 cctatcgtca cggcgctcat tggggcctgg gttctatttt atcattacag ccatcaggga
    32521 ccggaagtga ccctgatcac cgcgaatgcg gaaggaattg aaggtggcaa aaccaccatt
    32581 aaaagccgta gcgttgacgt cggcgtggtt gaaagcgcca cactggctga tgatttgacg
    32641 cacgttgaaa tcaaagcgcg gctgaattcc ggtatggaaa aattgctgca taaagacacc
    32701 gtcttttggg tggtgaaacc gcagattggt cgcgaaggga ttagcggcct gggaacgctg
    32761 ctgtctggag tttatatcga actgcagcca ggcgcgaaag gcagcaaaat ggataaatac
    32821 gatttgctgg actcgccacc gttggccccg cctgatgcga aaggtatccg tgtgattctc
    32881 gatagcaaaa aagccgggca gctctcgcca ggagatccgg tgctgttccg tggctatcgg
    32941 gtaggttcgg ttgaaaccag caccttcgat acgcaaaaac gcaatatcag ttatcaactg
    33001 ttcatcaatg caccttatga ccgactggtg accagcaatg ttcgcttctg gaaagatagt
    33061 ggcattgcgg ttgatctgac gtcagcgggg atgcgtgtgg agatgggctc attgacaacg
    33121 ctgcttagtg gcggtgttag ctttgatgtg ccggaaggtc tggatttagg gcagccagtg
    33181 gcaccgaaaa cagctttcgt tttgtatgat gatcagaaga gcattcagga ttcgttgtac
    33241 accgatcaca ttgattatct gatgttcttt aaagattcgg tacgcggtct gcaaccggga
    33301 gctccggtag aattccgggg tattcgcctg ggtaccgtaa gcaaagtgcc attctttgcg
    33361 ccgaatatgc gtcagacatt taacgatgat taccgtattc cggtactgat tcgtatcgag
    33421 ccagagcggc tgaaaatgca gcttggcgaa aatacggatg ttgttgagca ccttggcgaa
    33481 ttgttgaaac gtggtttacg cggatcgctg aaaaccggaa acctggtcac tggtgcactg
    33541 tatgttgatc tcgatttcta tccaaatacg cctgcaataa ccggtattcg tgaatttaat
    33601 ggttatcaga ttatccctac tgttagcggc ggcctggcgc aaatccagca acgactgatg
    33661 gaagcgttgg ataagatcaa caaactgcca ttgaatccga tgattgaaca ggcaaccagt
    33721 acgttttctg aaagtcagcg cacaatgaaa aacctgcaaa cgacgctgga tagcatgaac
    33781 aagatcctcg ctagccagtc gatgcagcag ttgccgacgg atatgcagtc aacgttgcgt
    33841 gaattgaatc gcagcatgca gggcttccag cctggctccg cagcctacaa caagatggtg
    33901 gcggatatgc agcgccttga tcaggtgttg cgagaactgc aaccggtgct gaaaacgctc
    33961 aatgagaaga gtaacgcgct ggtatttgaa gcgaaggaca aaaaagatcc agagccgaag
    34021 agggcgaaac aatgaaaaag tggctagtga cgattgcagc actgtggctg gccggatgca
    34081 gctccggcga aattaataaa aactattacc agttacctgt ggtgcagagc ggtacacaaa
    34141 gtaccgccag ccagggcaat cgtctgttat gggtagagca ggtcactgtt cctgactatc
    34201 tggcggggaa tggtgtggtt tatcaaacca gtgatgtgaa gtatgtgatt gccaacaaca
    34261 acttgtgggc cagcccgttg gatcaacagt tgcgcaacac cctggttgcc aacctgagta
    34321 cgcaactgcc cggctgggtg gttgcctccc agcctctggg aagcgtccag gacacgctca
    34381 atgttaccgt aacggagttt aacggtcgct atgatggcaa ggtcattgtc agtggtgagt
    34441 ggctgttgaa ccaccaggga caactgatca aacgtccgtt ccgtctggaa ggagtgcaaa
    34501 ctcaggatgg ttacgatgag atggttaaag tgctggccgg tgtctggagt caggaagccg
    34561 cttctattgc acaagagata aagcgtctac cttaattata aagatttgta agtataaccg
    34621 tctccggtat gttgcctgag gcggtttttt tgtttctaac gtgcggaaaa atttgttcct
    34681 cttcacattt t
//
LOCUS       DADMHC010000022        34052 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.022, whole genome shotgun sequence.
ACCESSION   DADMHC010000022 DADMHC010000000
VERSION     DADMHC010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 34052)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34052)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34052
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.022"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            11..190
                     /locus_tag="JNZ57_000842"
     CDS             11..190
                     /locus_tag="JNZ57_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HAY8827150.1"
                     /translation="MNAPWFIPGIDFSDHLNYWQHDIPAVMITDTAFYRNKQYHLPGD
                     TADRLNYQKMAQMVL"
     gene            316..819
                     /locus_tag="JNZ57_000843"
     CDS             316..819
                     /locus_tag="JNZ57_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfbM family protein"
                     /protein_id="HAY8827151.1"
                     /translation="MGMIGYFAEIDSEKINQLLESTEKPLMDNIHDTLSGLRRLDIDK
                     RWDFLHFGLTGTPGFDPAKNDPLSRAVLGEHSLEDGIDGFLGLTWNQELAATIDRLES
                     LDRSKLRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNH
                     ALTVIVR"
     gene            complement(886..2343)
                     /gene="nuoN"
                     /locus_tag="JNZ57_000844"
     CDS             complement(886..2343)
                     /gene="nuoN"
                     /locus_tag="JNZ57_000844"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416779.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HAY8827152.1"
                     /translation="MTITPQNLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSVIG
                     LNAALVSLWFVGQAGAMDVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNK
                     DEFYLLVLIAALGGILLANANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYT
                     ILSAAASSFLLFGMALVYAQSGDLSFVALGKNLGDGMLNEPLLLAGFGMMIVGLGFKL
                     SLVPFHLWTPDVYQGAPAPVSTFLATASKIAIFGVVMRLFLYAPVGDSEAIRVVLAII
                     AFASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIALQTGEMSMEAVGGYLAGYL
                     FSSLGAFGVVSLMSSPYRGPDADSLFSYRGLFWHRPILAAVMTVMMLSLAGIPMTLGF
                     IGKFYVLAVGVQAHLWWLVGAVVVGSAIGLYYYLRVAVSLYLHAPEQPGRDAPSNWQY
                     SAGGIVVLISALLVLVLGVWPQPLISIVRLAMPLM"
     gene            complement(2350..3879)
                     /gene="nuoM"
                     /locus_tag="JNZ57_000845"
     CDS             complement(2350..3879)
                     /gene="nuoM"
                     /locus_tag="JNZ57_000845"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HAY8827153.1"
                     /translation="MLLPWLILIPFIGGFLCWQTERFDVKVPRWIALITMGLTLALSL
                     QLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAV
                     LCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHK
                     ASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSG
                     VEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSL
                     PLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS
                     QLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFA
                     VATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKS
                     QIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTR
                     P"
     gene            complement(4043..5884)
                     /gene="nuoL"
                     /locus_tag="JNZ57_000846"
     CDS             complement(4043..5884)
                     /gene="nuoL"
                     /locus_tag="JNZ57_000846"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HAY8827154.1"
                     /translation="MNMLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALV
                     TAFIGVDFFANGEQAYSQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMY
                     ASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTD
                     PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWA
                     TLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMT
                     PEILHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFH
                     LMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYFCFLVGGAALSALPLV
                     TAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKG
                     VTHSLPLIVLLILSTFVGALIVPPLQSVLPQTTELAHGSMLTLEITSGVVAVVGILLA
                     AWLWQGKRTLVTSIANSAPGRLLGTWWYNAWGFDWLYDKVFVKPFLGIAWLLKRDPLN
                     SMMNIPAVLSRFAGKGLLLSENGYLRWYVASMSIGAVVVLALLMVLR"
     gene            complement(5881..6183)
                     /gene="nuoK"
                     /locus_tag="JNZ57_000847"
     CDS             complement(5881..6183)
                     /gene="nuoK"
                     /locus_tag="JNZ57_000847"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015833671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HAY8827155.1"
                     /translation="MIPLQHGLILSAILFVLGLTGLVIRRNLLFMLIGLEIMINASAL
                     AFVVAGSYWGQTDGQVMYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSEMRG"
     gene            complement(6180..6734)
                     /gene="nuoJ"
                     /locus_tag="JNZ57_000848"
     CDS             complement(6180..6734)
                     /gene="nuoJ"
                     /locus_tag="JNZ57_000848"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HAY8827156.1"
                     /translation="MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFF
                     SLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAI
                     MLVVIVYAILGVNDQGIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGR
                     EERAGEVLSNRKDDSAKRKTEEHA"
     gene            complement(6746..7288)
                     /gene="nuoI"
                     /locus_tag="JNZ57_000849"
     CDS             complement(6746..7288)
                     /gene="nuoI"
                     /locus_tag="JNZ57_000849"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015959823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HAY8827157.1"
                     /translation="MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRY
                     RGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFC
                     GLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDG
                     KDKGEAENEAKPIDVKSLLP"
     gene            complement(7303..8280)
                     /gene="nuoH"
                     /locus_tag="JNZ57_000850"
     CDS             complement(7303..8280)
                     /gene="nuoH"
                     /locus_tag="JNZ57_000850"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015875065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HAY8827158.1"
                     /translation="MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQ
                     NRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVP
                     VSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFL
                     GLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAE
                     QELADGYHIEYSGMKFGLFFVGEYIGIVTISALMVTLFFGGWQGPLLPPFIWFALKTA
                     FFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVILWQAQ"
     gene            complement(8277..11003)
                     /gene="nuoG"
                     /locus_tag="JNZ57_000851"
     CDS             complement(8277..11003)
                     /gene="nuoG"
                     /locus_tag="JNZ57_000851"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311194.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HAY8827159.1"
                     /translation="MATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGA
                     CRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHD
                     CPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRY
                     YKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRK
                     WDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLK
                     DRPRQPVQRRGDDFITLNAEQAMQGAADILRQSKKVIGIGSPRASVESNFALRELVGE
                     ENFYTGIAHGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVALA
                     VRQAVKGKAREMAAAQKVADWQIAAILNIGQRAKHPLFVTNVDDTRLDDIAAWTYRAP
                     VEDQARLGFAIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSLE
                     VIQAAANVAKALKGRGADVGITMIARSVNSMGLGIMGGGSLEEALTELETGRADAVVV
                     LENDLHRHASATRVNAALAKAPLVMVVDHQRTAIMENAHLVLSAASFAESDGTVINNE
                     GRAQRFFQVYDPAYYDSKTVMLESWRWLHSLHSTLLSREVDWTQLDHVIDAVVAKIPE
                     LAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANISVHEPRQPQDIDTMFTFSMEG
                     NNQPTAHRSQVPFAWAPGWNSPQAWNKFQDEVGGKLRFGDPGVRLFETSENGLDYFTS
                     VPVRFQPQDGKWRIAPYYHLFGSDELSQRAPVFQSRMPQPYIKLNPADAAKLGVNAGT
                     RVSFSYDGNTVTLPVEIAEGLTAGQVGLPMGMSGIAPVLAGAHLEDLKEAQQ"
     gene            complement(11056..12393)
                     /gene="nuoF"
                     /locus_tag="JNZ57_000852"
     CDS             complement(11056..12393)
                     /gene="nuoF"
                     /locus_tag="JNZ57_000852"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HAY8827160.1"
                     /translation="MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTG
                     LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR
                     LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI
                     MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGVWGKPTCVNN
                     VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILED
                     YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIN
                     MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLG
                     PGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPNLLKERW"
     gene            complement(12390..12890)
                     /gene="nuoE"
                     /locus_tag="JNZ57_000853"
     CDS             complement(12390..12890)
                     /gene="nuoE"
                     /locus_tag="JNZ57_000853"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012124159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HAY8827161.1"
                     /translation="MHENQQPQTEAFELSAAEREAIEHEMHHYEDPRAASIEALKIVQ
                     KQRGWVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGY
                     QGIQAALEKKLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMIDEDTHAHLTPEAIPE
                     LLERYK"
     gene            complement(12893..14695)
                     /gene="nuoC"
                     /locus_tag="JNZ57_000854"
     CDS             complement(12893..14695)
                     /gene="nuoC"
                     /locus_tag="JNZ57_000854"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C/D"
                     /protein_id="HAY8827162.1"
                     /translation="MVNNMTDLTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATR
                     TGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHL
                     ISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMM
                     PQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFL
                     NLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE
                     YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT
                     PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA
                     SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF
                     DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERT
                     LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTISYRTRIRTPSY
                     AHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR"
     gene            complement(14789..15451)
                     /locus_tag="JNZ57_000855"
     CDS             complement(14789..15451)
                     /locus_tag="JNZ57_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017490251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HAY8827163.1"
                     /translation="MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLND
                     MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTC
                     FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPP
                     RPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPD
                     EI"
     gene            complement(15467..15910)
                     /gene="nuoA"
                     /locus_tag="JNZ57_000856"
     CDS             complement(15467..15910)
                     /gene="nuoA"
                     /locus_tag="JNZ57_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoA"
                     /protein_id="HAY8827164.1"
                     /translation="MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARAR
                     SKNVPFESGIDSVGSARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVE
                     AAIFIFVLLAGLVYLVRIGALDWTPARSRRERMNPETNSIANRQR"
     gene            complement(16541..17479)
                     /gene="lrhA"
                     /locus_tag="JNZ57_000857"
     CDS             complement(16541..17479)
                     /gene="lrhA"
                     /locus_tag="JNZ57_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LrhA"
                     /protein_id="HAY8827165.1"
                     /translation="MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQ
                     QMQRLEQLVGKELFARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLT
                     IGASDESADTILPFLLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA
                     FKALNLRTSPTHWYCAAEYVLQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYV
                     ASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNEL
                     AQVIYQAMESYHNPWQYSPMSAPEGDDSLLIERDIE"
     gene            18399..19616
                     /locus_tag="JNZ57_000858"
     CDS             18399..19616
                     /locus_tag="JNZ57_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HAY8827166.1"
                     /translation="MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPA
                     PFGFDAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGN
                     GVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDD
                     IRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDA
                     EHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRL
                     CANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCVKPRGALYM
                     FPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPRVDDIELSL
                     SKFARFLSGYHQL"
     gene            19700..20299
                     /gene="yfbR"
                     /locus_tag="JNZ57_000859"
     CDS             19700..20299
                     /gene="yfbR"
                     /locus_tag="JNZ57_000859"
                     /EC_number="3.1.3.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-deoxynucleotidase"
                     /protein_id="HAY8827167.1"
                     /translation="MKQSHFFAHLSRLKLINRWPLMRNVLTENVSEHSLQVAMVAHAL
                     AAIKNRKFGGNVNAERIALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQ
                     KLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAK
                     TRLEATLEARRSQEMDYFMEVFVPSFHLSLDEISQDSPL"
     gene            complement(20358..22190)
                     /locus_tag="JNZ57_000860"
     CDS             complement(20358..22190)
                     /locus_tag="JNZ57_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HAY8827168.1"
                     /translation="MNGELIWVLSLLAVAIVLFATGRVRMDAVALFVIVAFALSGTLT
                     VPEVFSGFSDPNVVLIAALFIIGDGLVRTGVATVMGTWLVKVAGNSEIKMLVLLMLTV
                     AGLGAFMSSTGVVAIFIPVVLSVAMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLV
                     VNSELLREGYHGFSFFSVTPVGLVVLVLGILYMLVMRFMLKGDTQTPQREGWTRRTFR
                     DLIREYRLTGRARRLAIRPGSAMIGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVN
                     GVSEFRARDVLLIDMSAADVDLRQFCSEQLLEPMVLRGEYFSDQALDVGMAEISLIPE
                     SELIGKSVREIGFRTRYGLNVVGLKRNGVALEGSLADEPLLLGDIILVVGNWKLIGML
                     AKQGRDFVALNLPEEVSEASPAHSQAPHAIFCLVLMVALMLTDEIPNPVAAIIACLLM
                     GKFRCIDAESAYKSIHWPSIILIVGMMPFAVALQKTGGVALAVKGLMDIGGGYGPHMM
                     LGCLFVLSAVIGLFISNTATAVLMAPIALAAAKTMGVSPYPFAMVVAMAASAAFMTPV
                     SSPVNTLVLGPGNYSFSDFVKLGVPFTIIVMAVCVVMIPMLFPF"
     gene            complement(22277..22927)
                     /gene="hxpA"
                     /locus_tag="JNZ57_000861"
     CDS             complement(22277..22927)
                     /gene="hxpA"
                     /locus_tag="JNZ57_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HpxA"
                     /protein_id="HAY8827169.1"
                     /translation="MRCKGFLFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVLAFIH
                     GKQAITSLRHFMAGKSEADIAAEFTRLEHIEATENEGITALPGAIALLNHLNKAGIPW
                     AIVTSGSMPVARARHKIAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVV
                     AEDAPAGVLSGLAAGCHVIAVNAPADTPRLNEVDLVLHSLEQITVTKQLNGDVIIQ"
     gene            complement(22938..23432)
                     /locus_tag="JNZ57_000862"
     CDS             complement(22938..23432)
                     /locus_tag="JNZ57_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007371080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfbU family protein"
                     /protein_id="HAY8827170.1"
                     /translation="MEMTNAQRLILSNQYKMMTMLDPANAERYRRLQTIIERGYGLQM
                     RELDREFGELKEETCRTIIDIMEMYHALHVSWSNLQDQQSIDERRVTFLGFDAATEAR
                     YLGYVRFMVNVEGRYTHFDAGTHGFNAQTPMWEKYQRMLNVWHACPRQYHLSANEINQ
                     IINA"
     gene            complement(23515..23970)
                     /locus_tag="JNZ57_000863"
     CDS             complement(23515..23970)
                     /locus_tag="JNZ57_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF412 domain-containing protein"
                     /protein_id="HAY8827171.1"
                     /translation="MSTPDNRSVNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMT
                     RYAIRFMPPIAVFTLCWQIALGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAI
                     LNWFYEVRGKLQESGQVLAPVEGKPDYQALADTLKRAFKQLDKTFLDDL"
     gene            24308..25510
                     /gene="ackA"
                     /locus_tag="JNZ57_000864"
     CDS             24308..25510
                     /gene="ackA"
                     /locus_tag="JNZ57_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HAY8827172.1"
                     /translation="MSSKLVLVLNCGSSSLKFAIIDAVNGEEYLSGLAECFHLPEARI
                     KWKMDGNKQEAALGAGAAHSEALNFIVNTILAQKPELSAQLTAIGHRIVHGGEKYTSS
                     VVIDESVIQGIKDAASFAPLHNPAHLIGIEEALKSFPQLKDKNVAVFDTAFHQTMPEE
                     SYLYALPYNLYKEHGIRRYGAHGTSHFYVTQEAAKMLNKPVEELNIITCHLGNGGSVS
                     AIRNGKCVDTSMGLTPLEGLVMGTRSGDIDPAIIFHLHDTLGMSVDAINKLLTKESGL
                     LGLTEVTSDCRYVEDNYATKEDAKRAMDVYCHRLAKYIGAYTALMDGRLDAVVFTGGI
                     GENAAMVRELSLGKLGVLGFEVDHERNLAARFGKSGFINKEGTRPAVVIPTNEELVIA
                     QDASRLTA"
     gene            25585..27729
                     /gene="pta"
                     /locus_tag="JNZ57_000865"
     CDS             25585..27729
                     /gene="pta"
                     /locus_tag="JNZ57_000865"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HAY8827173.1"
                     /translation="MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPR
                     TGGDAPDQTTTIVRANSSTTTAAEPLKMSYVEGLLSSNQKDVLMEEIVANYHANTKDA
                     EVVLVEGLVPTRKHQFAQSLNYEIAKTLNAEIVFVMSQGTDTPEQLKERIELTRNSFG
                     GAKNTNITGVIVNKLNAPVDEQGRTRPDLSEIFDDSSKAKVNNVDPAKLQESSPLPVL
                     GAVPWSFDLIATRAIDMARHLNATIINEGDINTRRVKSVTFCARSIPHMLEHFRAGSL
                     LVTSADRPDVLVAACLAAMNGVEIGALLLTGGYEMDARISKLCERAFATGLPVFMVNT
                     NTWQTSLSLQSFNLEVPVDDHERIEKVQEYVANYINADWIESLTATSERSRRLSPPAF
                     RYQLTELARKAGKRIVLPEGDEPRTVKAAAICAERGIATCVLLGNPAEINRVAASQGV
                     ELGAGIEIVDPEVVRESYVGRLVELRKNKGMTETVAREQLEDNVVLGTLMLEQDEVDG
                     LVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPEQVYVYGDCAINPDPTAEQL
                     AEIAIQSADSAAAFGIEPRVAMLSYSTGTSGAGSDVEKVREATRLAQEKRPDLMIDGP
                     LQYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTGNTTYKAVQRSADLISIGPMLQG
                     MRKPVNDLSRGALVDDIVYTIALTAIQSAQQQ"
     gene            27919..29439
                     /gene="yfcC"
                     /locus_tag="JNZ57_000866"
     CDS             27919..29439
                     /gene="yfcC"
                     /locus_tag="JNZ57_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416801.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative basic amino acid antiporter YfcC"
                     /protein_id="HAY8827174.1"
                     /translation="MSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQ
                     EVQYQVDGQTKTRKVVDPHSFRILTNEAGEPEYHRIQLFTTGDERPGLMNFPFEGLTS
                     GSKYGTAVGIIMFMQVIGGAFGIVMRTGTIDNGILALIRHTRGNEILFIPALFILFSL
                     GGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQ
                     GIAGVPVLSGSGLRIVVWVIATMIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQAD
                     VEQRPFTFGDWLVLIVLTAVMVWVIWGVIVNAWFIPEIASQFFTMGLVIGIIGVVFRL
                     NGMTVNTMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGDASVLNTILNSIANAI
                     SGLDNAVAAWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFG
                     DGFSHIIYPTSASLMATLGVCRVDFRNWLKVGAPLLGLLFIMSSVVVIGAQLMGYH"
     gene            complement(29472..30014)
                     /gene="yfcD"
                     /locus_tag="JNZ57_000867"
     CDS             complement(29472..30014)
                     /gene="yfcD"
                     /locus_tag="JNZ57_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase YfcD"
                     /protein_id="HAY8827175.1"
                     /translation="MEQRRLASTEWVDIVNEENEVIAQASREQMRAQCLRHRATYIVV
                     HDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAE
                     HGQFYFEDKNCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKA
                     LALWMKRNAKNEAVETETAE"
     gene            complement(30072..30623)
                     /gene="yfcE"
                     /locus_tag="JNZ57_000868"
     CDS             complement(30072..30623)
                     /gene="yfcE"
                     /locus_tag="JNZ57_000868"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311211.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase"
                     /protein_id="HAY8827176.1"
                     /translation="MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRN
                     ALPEGYAPAKVAERLNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFL
                     THGHLFGPENLPALNQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIPKGGNPASYGML
                     DNDVLSVIALNDQSIIAQVAINP"
     gene            complement(30679..31323)
                     /gene="yfcF"
                     /locus_tag="JNZ57_000869"
     CDS             complement(30679..31323)
                     /gene="yfcF"
                     /locus_tag="JNZ57_000869"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione transferase"
                     /protein_id="HAY8827177.1"
                     /translation="MSKPAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGE
                     HLQPTWQGYGQTRRVPLLQIDDFELSESSAIAEYLEDRFAPPTWERIYPLDLENRARA
                     RQIQAWLRSDLMPIREERPTDVVFAGAKKAPLTAEGKASAEKLFAMAEHLLALGQPNL
                     FGEWCIADTDLALMINRLVLHGDEVPERLVDYATFQWQRASVQRFIALSAKQSG"
     gene            31459..32106
                     /gene="yfcG"
                     /locus_tag="JNZ57_000870"
                     /pseudo
     CDS             31459..32106
                     /gene="yfcG"
                     /locus_tag="JNZ57_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416805.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GSH-dependent disulfide bond oxidoreductase"
     gene            32163..32525
                     /gene="folX"
                     /locus_tag="JNZ57_000871"
     CDS             32163..32525
                     /gene="folX"
                     /locus_tag="JNZ57_000871"
                     /EC_number="5.1.99.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate 2'-epimerase"
                     /protein_id="HAY8827178.1"
                     /translation="MAQPAAIIRIKNLRLRTFIGIKEEEINNRQDIVINVTIHYPADK
                     ARTSEDINDALNYRTVTKNIIQHVENNRFSLLEKLTQDVLDIAREHHWVTYAEVEIDK
                     LHALRYADSVSMTLSWQR"
     gene            32546..33439
                     /locus_tag="JNZ57_000872"
     CDS             32546..33439
                     /locus_tag="JNZ57_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family protein"
                     /protein_id="HAY8827179.1"
                     /translation="MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVLGPR
                     VTLWQGLADQSNLNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINAS
                     DTPPSVLISGSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCL
                     LRTGVLLAPDGGILGKMLPPFRLGLGGPIDSGRQYLAWIHIDDMVNGILWLLDNELRG
                     PFNMVSPSPVRNEQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRAMPKRL
                     EEAGFAFRWYDLEEALADVVR"
     gene            complement(33487..>34052)
                     /locus_tag="JNZ57_000873"
     CDS             complement(33487..>34052)
                     /locus_tag="JNZ57_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HAY8827180.1"
                     /translation="GYKELPLVIPMLFYHGCRSPYPYSLCWLDEFAEPAIARKIYSSA
                     FPLVDITVVPDDEIMQHRKMALLELIQKHIRQRDLLGLVDQIVSLLVTGNTNDRQLKA
                     LFNYVLQTGDAQRFRAFIGEIAERAPQEKEKLMTIADRLREEGAMQGKHEEALRIAQE
                     MLDRGLDRELVMMVTRLSPDDLIAQSH"
BASE COUNT         8513 a         9288 c         8554 g         7697 t
ORIGIN      
        1 tgtttattct atgaatgccc catggtttat tcccggtatt gatttctctg accacctgaa
       61 ttattggcaa cacgatattc ccgccgtaat gattactgac accgcttttt atcgtaataa
      121 acaataccac ttgcccggtg atacagcaga cagattgaat tatcagaaaa tggctcagat
      181 ggtgttataa ccttgttaca caacagtaaa taataaaaat ttctcgaggc gggtccagaa
      241 acagcgacat gtacatttta ttttccctcg tctgttttaa gatgcgaaac ataaaattca
      301 atggaggaaa aataaatggg aatgattggt tattttgcag aaattgactc agaaaagatt
      361 aaccaactgc ttgagtctac tgaaaaacct ttgatggata atatacatga cacgctttca
      421 ggattacgcc gactggatat tgataaacgc tgggattttt tacactttgg gctgacaggc
      481 acccctggtt ttgatcccgc gaagaatgat ccgctgagtc gtgccgtgct tggtgaacac
      541 agcctcgaag atggcataga tggcttcctg ggattgacct ggaatcagga attagccgcg
      601 acaatcgacc gactggaatc actggatcga agtaagctgc gtaaacagtt ttccattaag
      661 cgactcaatg aaatggagat ttatccggga gtgacctttt cagaagagtt agaggggcaa
      721 ctctttgcct cgatcatgct tgatatggaa aagctgatta gcgcgtatcg acgtatgctg
      781 cgacaaggga atcatgcgct gacggttatt gttcggtgat ggtgtcagag cgccaaaaaa
      841 aaccgccgaa catgtcggcg gctttctgac ttacaaacta acagattaca tcagcggcat
      901 tgctaaccgc acaatactaa tcagcggttg tggccataca cccagcacca gtaccaacag
      961 tgcagaaatc agcaccacga taccgcccgc gctgtactgc cagtttgacg gtgcatcgcg
     1021 acccggttgt tccggtgcgt gcaggtacag gctcaccgcc acgcgcaggt agtagtagag
     1081 gccgattgcc gaaccgacaa ccacggcacc caccagccac cacaagtgtg cctggacacc
     1141 gaccgccagc acgtagaact taccgataaa gcccagcgtc atcgggatac cggccagaga
     1201 cagcatcatc accgtcatca ctgccgcgag gatcggacga tgccagaaca gaccgcggta
     1261 agagaacagg gaatcagcat ccgggccacg atacgggctg gacatcaggc tgaccacgcc
     1321 gaacgcgccg aggctgctga acagataacc ggccaggtaa ccccctaccg cttccatcga
     1381 catctcgccg gtttgcagcg caatcagcgc caccagcaga tagccgaggt gagagataga
     1441 tgagtaaccg agcagacgtt tgatgttggt ctggctcaac gccatcaggt taccgaagat
     1501 gatggaggca aaggcgataa tcgccagtac tacgcgaatc gcttcgctgt cacccaccgg
     1561 tgcatagagg aacagacgca tcaccacacc gaagatagcg attttgctcg ccgtcgccag
     1621 gaaagtggaa accggcgcag gcgcgccttg gtatacgtct ggcgtccaca ggtggaacgg
     1681 caccagagag agtttgaagc cgaggccaac aatcatcatg ccgaaacctg ccagcaacag
     1741 cggctcgttg agcataccgt cgccgaggtt tttacccagc gcgacaaacg acaggtcgcc
     1801 agactgcgca tacaccagcg ccataccgaa cagcaggaaa gaagacgctg cggcagaaag
     1861 gatggtgtat ttgatactgg cttccagcga acgtttctgg cggaaagcgt aaccgaccag
     1921 gccaaacagc ggcaaagaga tcagttcaat accgaggaac agagacgcca gatggtttgc
     1981 attcgccagc aggatcccgc ccagcgcggc aattaacacc aacaggtaga actcatcctt
     2041 gttgtcgtta tagccttcaa gccacgggta ggcgaaagta caggtggcga ggctcgccaa
     2101 caataccagc ccggtgtaaa gcatggcgaa accatcaacg cgcatcagcg gcgtaacgtc
     2161 catagcgccc gcctggccaa caaaccagag cgaaaccagc gccgcgttaa gcccaataac
     2221 cgagagcgta gcgttgagga aatgattgcg tcgccacgca atggagagca tcacaaccac
     2281 caccgttaag ccgacgatca gcaacggtag cagtgcgatc aggttttgtg gagttattgt
     2341 catggcgatt tacggccttg tagtagtaac ggaattaaca aaccactgct ggatattgcc
     2401 aatcgcggag tgcgaggtat ccagaatcgg ctgcggatag aagcccagca gtaccagcag
     2461 caccaccagc aacaggatca taaacagctc acgcagcgac atccctggca gttcctggct
     2521 ggcaatctgg cttttcgctt taccgaagta agcgcgatgc aacatcgcca gcgaataaac
     2581 agatgcaaag accagcccaa aggtagagat aacggtaatc accgggacaa cctggaagct
     2641 gccgaacaga atcataaatt cgccgacgaa gttaccggtg ccaggcatcc caagcgttgc
     2701 caccgcaaag aacagcgaca atgctggcag ccatttcatc ttgctccaca gaccgcccat
     2761 catgcgcatg tcgcgggtat ggatacgttc ataaagctga ccacaaagaa taaacagacc
     2821 cgccgccgac aaaccgtgcg caatcatctg gattaccgcg ccctggtagg ccaactggct
     2881 gccggtgtag atagcaatca gcacgaagcc catgtgggaa accgaggtgt aggcgatcag
     2941 acgtttgata tcggtctggg cgaaggccat ccacgcaccg tagaagatgc cgataacacc
     3001 cagccacata gcaattggcg cgaactctgc cgacgcgttc gggaacagcg gcagggagaa
     3061 acgcagcaaa ccgtaagcgg cagttttcag caagatcccc gcgaggtcaa cggaaccggc
     3121 ggtcggagcc tgggagtgcg catccggcag ccagccatgc agcggaacca ccggcatttt
     3181 gactgcgaag gcgatgaaga agcccagcat taacaggtat tccacaccac tggacattgg
     3241 cgtattcagc agctcttcat agttgaaggt ccagacgccg gtcgcattgt agtgaacaaa
     3301 aaccagcgcc aggatggcaa tcaacatcac caggccactc gcctgggtgt aaatgaagaa
     3361 cttggttgcc gccgtgatac gcgttttacc gtcagaggct ttatgccccc acagtgcgat
     3421 caggaagtac atcggcacca gcatcatttc ccagaagaag aagaacagga acatgtcgat
     3481 ggcaaggaac acgccgataa cgccgcccag gatccacatc aggttgaggt ggaagaagcc
     3541 ctgatatttt tcgatctctt tccacgaaca gagtaccgcc agcacaccga gcagaccggt
     3601 cagcacgacc atcagcagcg acagaccgtc aatggcgaga tgaatagaga taccaaaacg
     3661 cgggatccac ggcatgtcga attcagactg ccactgcgga attccggcgg attgcgtcag
     3721 tgaataaccg ccctgcaacc acagttgcag cgacagcgcc agcgtcaatc ccatggtgat
     3781 cagcgcgatc cagcgtggca ccttgacgtc aaagcgttcg gtctgccagc acaggaagcc
     3841 gccaataaag ggaattaata ttagccaggg tagtaacatg gcgatcttta ttccttgtaa
     3901 aagtcccgtc aggaccggat tttcaacgaa ttctcacgac agaaaattct cttcggactg
     3961 ggggtagtgt cggatgcgcc gcgaaggcag cttatccgac ctacgttctt atatgcccag
     4021 gggcaatccc acaatcctta actcaacgca gtaccatcaa cagtgccagc accacgaccg
     4081 caccgatgct catggatgcc acataccagc gcagataacc gttctcgctt aacagcaggc
     4141 ctttacctgc aaagcgggaa agaaccgccg gaatgttcat cattgagttc agcggatcgc
     4201 gtttcagcaa ccaggcaata cccaggaacg gcttgacgaa cactttgtcg tacagccagt
     4261 caaagcccca ggcgttgtac caccaggtgc ccagcagacg gcccggcgca ctgttggcaa
     4321 tggaggtcac cagagtacgt ttaccctgcc acagccaggc tgccagcaga ataccgacca
     4381 ccgcgaccac gccagaggta atttccaggg tcaacatgct gccgtgcgcc agttccgtcg
     4441 tttgcggaag cacgctctgc agcggcggta caatcagtgc gccaacgaag gtggaaagga
     4501 tcagcagcac aatcagcggc aggctgtgag ttaccccttt cacggcgtga gcgtgaattt
     4561 gttcttttcc gtggaagacg atgaaaatca tacggaaggt gtagagcgag gtcataaacg
     4621 caccgaccag acctgccacc atcagattga tatgaccatt cgccatcgca cccgcgagga
     4681 tctcatcctt actgaagaag cccgcagtga ccagcggtag tgccgacagt gctgcgccgc
     4741 ccaccaggaa gcagaaataa accagcggaa tagatttacg cagaccgccc atcttgaaga
     4801 tgttctgttc gtgatggcag gccagaatga cggaaccgga tgccaggaac agcagcgctt
     4861 taaagaacgc gtgagtcatc aagtggaaaa tcgccgcatc ccatgcctgc acgccaagcg
     4921 cgaggaacat gtagccaatc tggctcatgg tagagtaagc gagaacacgt ttgatgtcgg
     4981 tctgtaccag cgcggcaaaa ccggccagca gcagcgtaac cgccccgaca atgcccacca
     5041 gatgcagaat ttccggcgtc atcaggaaca ggccgtgggt acgggcgatc aggtagacac
     5101 ccgcggttac catggttgcg gcgtggatca gcgcggagac aggcgtcggg cccgccatcg
     5161 cgtcggcaag ccatgtctgc aacggcaact gcgcagattt accgaccgca ccgcccagca
     5221 gcatcagcgt cgcccacatc agcatgttat tgccgtcagc aaagtgcgct ggtgccagtt
     5281 ccaccatttc gcggaagttc agggtgccca gttcgttgta aagaatgaac agcgcgaaag
     5341 cgaggaacac gtcacccaca cgggtcacga cgaacgcttt cattgccgct gcgccattct
     5401 tcggatcggt gtaatagaac ccgatcagca gataggagca caggcccacg ccttcccagc
     5461 cgaggtacat cagcagcagg ttatcggcga gaaccagaac taccatgctg gcgatgaaca
     5521 ggttggtgta ggcgaagaag cgagagtagc cctcttcacc gcgcatgtac caggaggcgt
     5581 acatgtgaat aaggaaaccc acaccagtga ccaccgagag catggtcagc gacaggccgt
     5641 ccagcaccag gttaaaaccg atgttaaagt cgcctaccga catccacgtc cacagcggct
     5701 ggctgtatgc ctgctcgccg ttagcgaaga aatcaacgcc gataaaggcg gttaccagcg
     5761 ccgccaggcc cacagagcca acgccgacga tcgccgaaac gttttcagac cagcgcccac
     5821 gggagaacgc cagcaggacg aagccaatca atggcaaaat aatagttaag gcaagcatgt
     5881 tcatccgcgc atctcactta ctgaatcgat gttcaggttc tggcgacgac ggtgaagttg
     5941 cagcagcagc gcaaggccga tactcgcttc tgccgccgcg aggctgatgg cgagaatgta
     6001 catcacctga ccgtcggtct gaccccagta gcttccggcg accacaaagg ccagcgcgga
     6061 ggcgttaatc atgatttcca gaccaatcag cataaacagc agattgcgac ggataaccag
     6121 accggttaag ccaagaacga ataagattgc cgagaggatc aatccatgtt gtaaggggat
     6181 catgcgtgct cctccgtttt tcttttcgcg ctgtcgtctt tacgattgct cagcacttca
     6241 cccgcacgct cttcacgacc gacgtggaag gccacaacca gacccgcgag cagcagcata
     6301 gaagccagtt ccaccgccag tacgtaaggc ccgaacagcg taatacccac tgctttagca
     6361 ctgattggcg taccgtcgat accctgatca ttaacaccaa ggatggcgta aacaatcacc
     6421 accagcatga tggccgacaa aattgccgga ccaatccaca cctgcggttt cagccactgg
     6481 cgttcctgtt cgatttctga accgcccagg ttgagcatca tcaccacgaa cacgaacagc
     6541 accataatgg cacccgcgta gacgataatt tccagcgcac cggcgaagta agcgcccagt
     6601 gagaagaaca ccccggaaat cgccagcagc gaaataatca ggtacagcag tgcgtgtacc
     6661 ggattggtat gggtgatcac tcgcaaggtc gcaagtatgg ctatcaggcc acagatataa
     6721 aaagcgaact ccattgcccc tctccttacg gtaacaggct cttgacgtcg ataggcttgg
     6781 cttcgttctc tgcttcgccc ttatctttgc cgtcgattgc catacctgcc atccggtaga
     6841 agttatattc cgggtatttg cccggaccgg agatcagcag atcctctttt tcgtaaacca
     6901 gatcctggcg cttgtattcc cccatttcga aatccggggt taactgaatc gccgtggtcg
     6961 gacaggcttc ttcgcacaga ccacagaaaa tgcagcgtga gaagttgatg cggaaaaatt
     7021 ccgggtacca gcgaccgtct ttggtttctg ctttttgcag cgagatacag ccgaccgggc
     7081 aggctaccgc gcagaggtta caggctacgc aacgctcttc gccgtccggg tcgcgggtca
     7141 gaacgatacg accacgataa cggggcggca gatagaccgg ctcttccggg tacattcgcg
     7201 tttcgcgttt ggcgaacgcg tgcaggccga tcatccagat actacgaacc tgggtgccga
     7261 aacctactaa caattctttt aaggtcatgg tcttattgcc ccttattgcg cctgccagag
     7321 aatgacagcc gccgttacca gcaagttgat cagcgtcagc ggcaggcaga ttttccagcc
     7381 gaaggacatt acctggtcat aacgcggacg cggtaacgac gcacgaatca aaatgaacat
     7441 catcataaag aacgcggttt tcagcgcgaa ccagatgaat ggcggtaaca acgggccttg
     7501 ccagccaccg aagaacagcg tcaccatcaa tgcagagatg gtcacaatcc cgatgtactc
     7561 acccacgaag aacagaccga acttcatacc ggaatattca atgtggtaac catccgccag
     7621 ttcctgctcg gcttccggct ggtcaaacgg gtgacggtga cataccgcca cgcccgcgat
     7681 ggcaaaggta ataaaaccaa agaattgcgg gataacgttc cacacatgcg cctggctgtt
     7741 gacgatgtcg gtcatgttga atgaaccggc ctgcgccacc acgcccatca gggaaagccc
     7801 gaggaacact tcgtagctca gggtctgcgc agaagcacgc atcgcaccca gcaacgagta
     7861 tttgttgtta cttgaccagc ccgcaaacag caccgcgtaa accgccagac ctgccatcat
     7921 caggaagaac aaaatcccga tgttcaggtc ggcaaccacc caacccggac tgactggcac
     7981 aatcgcaaag gccagcagca gcgaggtaaa ggcaatcatc ggtgccaggg taaagatgac
     8041 gcgatccgag aatttcggga tccagtcttc tttaaagaac attttgatca tgtccgcaac
     8101 cagctggagc gaaccgcccc agccaacacg gttaggtcca taacggttct ggaacagacc
     8161 cagcaggcga cgttcgccaa agctcatgaa tgccccacag gtgacaacca ccagcaggat
     8221 caccaccgct ttgaggatgg tcagcaggat ctcaatcagt tccggtgata tccaactcat
     8281 tgttgtgcct ccttgagatc ctcaagatgc gcgccagcca gcaccggagc aatgccggac
     8341 atacccatcg gcaagcccac ctgccctgcc gtcagtcctt cggcgatttc aaccggcagc
     8401 gtgaccgtgt tgccatcgta actaaaggag acgcgtgtac ctgcgttcac acccaacttc
     8461 gcggcatccg ctgggttgag tttgatgtac ggctgcggca tacggctctg gaagaccgga
     8521 gcacgctgtg acaattcatc gctgccaaac aggtggtaat acggcgcaat acgccatttc
     8581 ccgtcctgcg gctggaagcg taccggtacg ctggtgaagt aatccagacc attctcgctg
     8641 gtttcaaaca gacgcacgcc cggatcgcca aagcgcagtt tgccgcccac ttcgtcctgg
     8701 aatttgttcc acgcctgcgg ggagttccag cccggtgccc aggcaaacgg cacttgcgaa
     8761 cggtgcgcgg tcggctggtt gttaccttcc atcgagaagg tgaacatggt gtcaatatcc
     8821 tgcggctgac gcggctcatg aacgctgata ttggcgcgca tggcggtacg accgctgtaa
     8881 cggtgcggtt cacgggccag tttctgccca cgaatacgga atgtcgcatc cggcgcagca
     8941 tctttgatac ctgccagttc cgggattttc gccacaacag cgtcaatcac atggtcgagc
     9001 tgcgtccagt ccacttcacg gctcagcagg gtgctgtgca gcgagtgcag ccagcgccag
     9061 ctttccagca tgacagtttt gctgtcgtaa taagccggat cgtaaacctg gaagaaacgt
     9121 tgggcgcgac cttcattatt aattaccgta ccgtcgcttt cagcaaagct ggcggcggaa
     9181 agtaccagat gggcgttttc catgatcgct gtacgctgat ggtcaaccac catcaccagc
     9241 ggtgctttag ccagcgcagc attcacgcgg gtagcagaag cgtgacgatg cagatcgttt
     9301 tccaacacca ccaccgcgtc ggcgcgtccg gtttccagtt cggttaacgc ttcttcaagc
     9361 gaaccgccac ccataatgcc cagccccatg ctgttgacgg aacgggcaat catggtgata
     9421 ccgacgtcag cgccgcgacc tttcagggct ttcgcgacgt tagccgccgc ctgaatcacc
     9481 tctaagctac cggcgttcgt cccggagata atcaacggtt tcttcgcacc tgccagtgcc
     9541 tgcacgatga cgtcgatttt gctttgcagc tcaggttcga taccgtcaac cgctggtgca
     9601 gagttatcca gcgcatgggc gatggcaaaa cctaaacgcg cctgatcttc aaccggtgcg
     9661 cggtaagtcc acgccgcgat atcatccaga cgggtgtcat caacgttggt aacaaacagc
     9721 ggatgcttcg cacgttgacc gatgttaagg attgccgcaa tctgccagtc agccactttc
     9781 tgtgctgccg ccatttcgcg cgctttacct ttcaccgcct gacgcactgc cagcgcgacg
     9841 cgcgcgccgg tctgggtaac gtcttcgccc agcaccagta ccgcatcgta agattcgatt
     9901 tcgcgcagag ccggagtata aatgccgcct tcacgcagca ctttcagcgc cagttgcaga
     9961 cgttcctgct caccgtgagc gataccggtg tagaagtttt cttcgcccac cagttcacgc
    10021 agtgcaaagt tgctttccac gctggcacgc ggagaaccaa taccgatcac tttcttcgac
    10081 tgacgcagaa tatctgccgc gccctgcatt gcctgttcgg cgttgagggt aatgaaatca
    10141 tcgccacgac gctgtactgg ctgacgcgga cgatccttca ggttgacgta accgtaaccg
    10201 aaacgaccac ggtcgcagag gaagtagtgg tttaccgtac cgttgtaacg gttttcgata
    10261 cgacgcagtt cgccgtaacg ttcaccgggg ctgatgttac agccgatgga acattgctgg
    10321 cagatgctcg gcgcaaactg catatcccat ttacggttgt aacgctcgga gtgcgttttg
    10381 tcggtaaata cgccggtcgg gcaaatttcg accaggttac cggaaaattc gctttccagc
    10441 gtgccgtctt ccgggcgacc gaagtagacg ttgtcgtgcg cgccataaac gcccagatct
    10501 gtaccgtcag cgtaatcttt gtagtaacgc acacagcgat agcaggcgat gcagcggttc
    10561 atttcgtgag agatgaatgg ccccaaatcc tgattacggt gggtacgttt ggtgaaacgg
    10621 tagcgacgga agctgtgtcc ggtcatcacg gtcatatcct gaagatggca gttaccgcct
    10681 tcttcacata ccggacagtc gtgcgggtgg ttggtcatta accactcgac cacactttca
    10741 cggaactgtt tcgcttcttc gtcgtcaatg gaaataaagg tgccatcgga agccggtgtc
    10801 atacaggaca tcaccaggcg accacgcgtg tcttccgcgt tttggtattg cttcaccgca
    10861 cactggcggc aagcaccgac gcttcccagc gccggatgcc agcaaaagta aggaatatca
    10921 aggcccagag acagacaagc ttccagcagg ttgtccgctc cgttgacctc gtattctttg
    10981 ccgtctacat gaattgtagc cattagcatg cttccagttt tctcggtcag ggaccgagcg
    11041 ttaatcgaaa ttcggttacc agcgctcttt cagcaggttc ggctgaatcc cattaatcaa
    11101 atgggtattg ctgaacggct gtttgattcc cgcctcaaat tcttcgcgga aatatttgat
    11161 ggcgctctgt aacggctcca ctgcaccagg tgcgtgggca cagaaagttt tacccgggcc
    11221 taagaatcga cacagttgct caagtgtttc gatatcgccc ggctggcctt cgccacgctc
    11281 cagcgcacgc agaattttca cgctccacgg cagaccgtcg cggcacggcg tacaccagcc
    11341 gcaggactca cgggcgaaaa actcttccag gttacgcacc agcgacacca tgttgatctc
    11401 atggtcaacc gccatcgcca gcgccgtacc cagacggctg cccgctttac cgatactttc
    11461 gaattccatc ggcagatcaa ggtgcgcttc ggtcaggaag tcagtccccg cgccgcctgg
    11521 ctgccaggct ttaaatttca gaccatcacg cataccaccg gcgtaatctt cgaggatctc
    11581 gcgtgcggtg gtgccgaacg gcagttccca cagtcccgga tttttcaccc gaccggagaa
    11641 gcccatcagc ttggtgccag catctttact tttcgagatg ttctgatacc actccacgcc
    11701 gttagcgagg atcgccggaa cgttacacag ggtttcgacg ttgttgacac aggtcggttt
    11761 gccccatacg ccggaggttg ccgggaaggg gggtttcgag cgtgggttag cacgacgccc
    11821 ttccagggag ttgattaacg ctgtttcttc cccgcagatg tagcgccctg ccccggtatg
    11881 gacgaacagt tcgaagtcga aacctgttcc cataatgttt ttgccaagca agcccgcttc
    11941 agtggcttcg gcaatggcgc ggcgcagatt tactgccgct tcgatatatt cgccacgcag
    12001 gaagatgtag ccacggtaag ctttcagcgc aaacgcggag atgagcatac cttccaccag
    12061 caggtgcggc agttgctcca tcaacaggcg gtctttatag gtgcccggct ccatttcatc
    12121 ggcgttacac agcaggtaac ggatgttcat ggattcgtct ttcggcatca ggctccactt
    12181 caggccagtc gaaaagcccg ctccgccgcg ccctttcaga ccagcgtctt ttacctgatt
    12241 aacgatttcg tccggagaca gcccggtcag cgccttacgc gccccttcgt aaccgttttt
    12301 gctgcggtat tcgtccagcc acactggctg tttgtcatcg cgcagacgcc aagtcagcgg
    12361 atgcgtttcg ggagtacgga taatgttttt catttatacc gctccagcag ttcagggatc
    12421 gcttccgggg tcagatgcgc gtgagtgtcc tcatcgatca tcatgtttgg ccctttatca
    12481 cagttcccca ggcagcaagt tggcagcagc gtaaagcggc catcaaatgt cgtttgccct
    12541 ggtttgatgt tcagcttttt ctcgagcgcc gcctgaatac cctgataccc gttgatatga
    12601 cagaccacgc tgtcgcaata acggatcaca tggcgaccaa ccggctggcg gaagatctga
    12661 ctgtagaacg ttgccacacc ttcgacgtcg cttgccggaa tacccagcac atcggcgatc
    12721 gcgtggatcg caccatccgg cacccagcct cgctgcttct gaacgatttt cagcgcttca
    12781 atggacgccg cacgcgggtc ttcgtagtgg tgcatctcgt gctcaatcgc ttcacgctct
    12841 gccgcactca gctcaaaagc ctcggtttgt ggttgttgat tctcgtgcat aattagcggt
    12901 ccacatctga cataacaaaa tcgatactgc ccagataaac aatcaggtca gacaccaggc
    12961 tgccgcggat cgccgccgga atttgctgca aatgcgcata actcggcgtg cggatacgag
    13021 tgcgataact gatggtgcta ccgtcgctgg tcaggtagta actgttgatc cccttggtcg
    13081 cctcaatcat ctggaaagat tcattggcag gcatcaccgg cccccacgac acttgcagga
    13141 agtgggtgat cagggtttcg atatgttgca gcgtgcgctc tttcggcggc ggcgtggtca
    13201 gcgggtgatc cgctttgaac gggccttccg gcatgttgtt gaggcactgc tcaagaatgc
    13261 gcagactctg gcgcagctct tccactttca gcattacgcg ggtgtagcag tcagaaacac
    13321 caccaccaac cgggatttca aagtcgaagt tttcatagcc agaataagga cgcgccttac
    13381 gcacgtcgaa gtcgatcccg gtagcacgca ggcccgcgcc agtggtgccc cactccagcg
    13441 cctctttcgc gccataggcg gcaacgccct gggaacgacc tttcagaatg gtattttgca
    13501 gcgccgcttt ctcgtaagac gccagacgtt tcggcatcca gtcgaggaac tcacgcagca
    13561 ggcgatccca gccgcgcggc aggtcgtgcg ctacgccgcc aatacggaac cacgccgggt
    13621 gcatacggaa acccgtgatc gcttccacca gatcgtaaat tttctgacga tcggtaaagg
    13681 cgaagaacac gggcgtcatt gcgccgacgt cctgaataaa ggtcgagatg tacagcaggt
    13741 ggctgttgat acggaacagt tcggagagca taacgcgaat gacgttaacg cgatccggca
    13801 cggtgatccc ggccagtttc tctaccgcca gcacgtaagg catttcgtta acgcagccgc
    13861 cgaggtattc aatacggtcg gtatacggaa tgtagctgtg ccaggactgg cgctcgccca
    13921 ttttctccgc accacggtgg tggtagccga tgtctggtac gcagtcgaca atctcttcgc
    13981 cgtcgagttg taaaacgata cggaaagccc cgtgcgccga cgggtggttc ggaccgaggt
    14041 tgaggaacat gaagtcctcg ttttcggtgc cgcgcttcat cccccactct tccggtttga
    14101 aggtcagggc ttccatctcc agatcctgtt tggctttggt cagctcaaac ggcgagaatt
    14161 cggtagcgcg cgccgggtaa tctttacgca gcgggtgacc tttccaggtt tgcggcatca
    14221 tgatgcggcg caggttcggg tgaccgtcga aagtaatgcc aaacagatcc caggtttcac
    14281 gctcatacca gttagcgttc gggaacagtt tggtgaaggt cggtacgtgc aggtcgtttt
    14341 ctgccagcgc caccttcagc atgatgtcgc ggttacgatc gatagaaatc agatggtaga
    14401 aaacggaaaa atccgcggca ggtaaccctt cgcggtgtgt gcgcagacgt tcgtccatgc
    14461 cgtgtaagtc aaacagcatg acgtaaggtt tcggcagttt ctttaagaaa tcgccaactt
    14521 ccagtaattg ttcacgcttg atccacacaa cgggaacccc ggtgcgagtc gcctgaacag
    14581 taaaggcatc cggcccaaaa cggttgcgca gttcgccaat taccggatca tcaagatgat
    14641 cgcgggtctg ccaggcgggt tcttgcgcgg ttaagtcggt catattgttc accattgcaa
    14701 atggtccgtg gtgactgtcg gcgcagtaag cttcgcgaaa tagatttagg aataagcgaa
    14761 gaaaaatccc tttgccgaca ggcgcaaatt aaatctcgtc aggtgtacgc aggttggtta
    14821 cggcaatgcg ttcaccgcgc ttgcgttcgc gctctgattg catattggcg cgataaacgc
    14881 cctgatcgcc aaccacccag gagagcggac gacgttcttt gccgatagat tcctgcaaca
    14941 gcatcagtgc ctgcatgtac gcttcaggac gcggcgggca gcccgggata tacacatcaa
    15001 ccgggatgaa tttatcgacg ccctgcacaa cggaataaat atcgtacata ccaccagagt
    15061 tggcacaggc acccattgag ataacccatt ttggttccag catctggtca tacagacgct
    15121 gaataaccgg tgccattttg gtaaagcagg ttcctgcaac caccatcagg tcagcctgac
    15181 gcggcgaagc acgcaatact tctgcgccaa aacgcgccac gtcatgcacc gcggtaaacg
    15241 aagtcaccat ctcaacgtaa cagcaggaaa gaccgaagtt atacggccaa attgagtttt
    15301 tacgacccca gttaaccatg tcattgagct tgcccataaa cacgtttttg ttaacttctt
    15361 gctccagagg gtcggttacg atctcctgct tttgcagggg gtaacggtcg ttctcaccgt
    15421 tgggatctat gcgggtgagc gtataatcca tcttaatgcc tcgcggttag cgttgacgat
    15481 tagcgatact gttcgtttcc gggttcatac gctcgcggcg tgaacgcgcg ggcgtccagt
    15541 ccagcgcgcc aatacgcacc agataaacca gacctgccag taacacaaaa ataaaaattg
    15601 cagcttccac aaagcctacc cagccgcttt cgcggataga ggttgaccat gcgaacagat
    15661 acagcgcttc aacgtcgaag ataacgaaga acatggccac cagataaaac ttggcggaca
    15721 ggcgtaagcg ggcggagccg accgagtcga taccggattc aaacggcacg tttttcgacc
    15781 tcgcgcgtgc gcgaccgcct aaaaaccaac cgcctaccag cattaggcaa cacaggccaa
    15841 tggcaacgat aagaaagata gcgaatgccc agtgatgagc gatgacttca gtggatgttg
    15901 acatactcat tgcttactca tcaaaagtag cgccagattc actgctcttc acagcagatg
    15961 gacgccacat cgattcatgg ggaggaataa aaaaaacctt acaatcactg tagaaattct
    16021 tttatacagc taattgatgt ggtcttttac tcctttctat aaccttttgt caactttaac
    16081 aaaagtttct tcatattagt ttacataata tcaacaccat tagcatttaa tgccctttca
    16141 ccccagatcc ttgacgactc caggataatt agatgttgtt gaatcgtgtc cgttgtgaag
    16201 caatggaaaa aatacgggtc tattttgaca ggaatttgtg tcgattcctc cccccaaaag
    16261 agagtatttt cttgatctgt gacacgcttt tgtcattcca taacaaaaac gcagcaacaa
    16321 atttacgtat tttttaacat cattgtagca ggtgattttt ttcaggcgat tatttgtgcg
    16381 ttcgggacgt gaatctctgg agattgaaaa atgaacagtt ttgtacgttc tgcactatgc
    16441 gaggaaggat ttttactaaa aaaaagccgc tggggtttaa aacaccccca gcggctcgtt
    16501 ttttacacta ttgtctcagg aattatctat cgtccgtcga ttactcgata tccctttcaa
    16561 tcaacaatga atcatcccct tccggagcag acattgggct gtattgccac ggattatggt
    16621 agctctccat cgcctgatag atcacctggg ccagctcatt attactggac gggtcatagc
    16681 acagcaaata ttcggtatca ggtagcggcg gtaagccatc tactccactc agcacacgca
    16741 ggtccgggct catcatctca accggccttg ccgtcacgcc aagaccggct ttcactgccg
    16801 cacgaacggc cggaagcgtc gaggcgacat aagccagtcg ccatggaata tctgctttat
    16861 taagcgttgc cagcaccata tcgcgaaacg gacttggatc atccagcaat acaagaggga
    16921 tcggctcgcc tttttgcaat acgtattccg ctgcgcagta ccagtgtgtt ggcgaggtac
    16981 gcaggttcaa tgccttaaac gctgaaggac gatgggtggt taccatcaaa tccacttcct
    17041 gggattccag catttctgcc atataggcat tacgtttaac gcggacatcc agcgctaatt
    17101 tcggataaac cgaactcacg cgatttaaca ggaaaggtaa gatcgtatcg gcagattcat
    17161 ctgaagcacc gatagttaac acgccctgaa gattactgaa cattaatgat gagcaggcct
    17221 catcattaaa acgcaggatt ttcctggcgt aaccaagaag ttgaatgcca tgttcagtta
    17281 acagtttgtt gcgaccgtga cgagcgaaca gttctttccc aacgagttgt tccagacgct
    17341 gcatttgctg acttacggcg gactgagtac gacacacagc ggcagctgcg gcagcaaaag
    17401 tgttcagatc ggcaacagca acaaatgttc tcagcagatc gaggtcgagg ttaattatcg
    17461 gacgatttgc acttatcata tattatcact tactggcggc tcatactgag ctggttaatg
    17521 ctgtgcacac acaaacaagc aattccattt gtaatgtgcc tccctggcag tttcatccgg
    17581 aacccggacg aaagtaaaaa tgcatatgag ttgcactaaa aaagcgactc acattgttcc
    17641 gttataatgc ctgaagtaga tcacagaata tatcttcagg gatcgcatat ctattaagtt
    17701 actcactctt ttctatttat gacatgcgcg tgtttgtata aatgtaaatg tgagtccttg
    17761 ttccactctc gtgcagcatc gctggtcata cgcgaacacg tacaaacagc aatggtgagg
    17821 cggcatcaag agcagggatc cgtcatttat gcgagcattt taccccaaaa accttttatt
    17881 tataagggcc attgcgaatc atctgatgca aagttatgtt atgttaggca aagtaatctt
    17941 ctattattaa taagcacatc aaaacctttt tgaatattaa ataataatta attagcataa
    18001 tcctcattca ttaattccgc ttaacaatag tttcacacct tgcccccatt acgacacctc
    18061 ggaaatcatc acgctgttaa actctccgta atgcggaaat atcatcatcg cgtttcatta
    18121 gtgaattctt aaatgaggca ttttcacaca attatcttac agataaaaaa accagactta
    18181 caattaagaa tcagaataat tcactatata acattgcatg tgaagcatat acacctcgtt
    18241 attttgtcat tatcaagtta ttaacagcac aatcgagcct tcccctctgg caaaatctta
    18301 ttctgcagac cttcaaaaca ccgtcctggg ggagtacatt gttctaagct gacttccacg
    18361 gcagggagtg gcgataacag caaaaaaggt caagattcat gtcccccatt gaaaaatcca
    18421 gcaaattaga gaatgtctgt tatgacatcc gtggtccggt gctgaaagaa gcaaaacgcc
    18481 tggaagaaga aggtaacaag gtactgaaac tgaacatcgg caacccagcc ccgttcggtt
    18541 ttgacgcgcc agatgaaatc ctcgttgacg tgatacgcaa cctgcctacc gctcaagggt
    18601 attgcgattc caaaggtctt tactccgcgc gtaaagccat catgcagcac taccaggctc
    18661 gtggcatgcg tgatgttacc gtggaagata tttacatcgg caatggtgta tcggagctta
    18721 tcgttcaggc aatgcaggca ttgctgaaca gcggggacga aatgttggtt cctgcaccag
    18781 attacccact atggaccgcg gcggtttcgc tttccagcgg taaagcggtg cattatcttt
    18841 gcgatgaatc ctctgactgg ttcccggacc tcgatgatat tcgcgctaaa attacgcctc
    18901 gtacgcgtgg gatcgttatt atcaacccaa ataacccaac cggcgcggta tattccaaag
    18961 agcttttaat ggagattgtg gagattgcac gtcagcataa tctcattatc ttcgccgatg
    19021 aaatttatga caaaattctt tacgacgacg ctgagcatca ctcaattgcg ccgctggcac
    19081 ctgacctgct gaccattacc tttaacggac tgtcgaaaac gtaccgcgtt gcaggcttcc
    19141 gtcaggggtg gatggtgttg aacgggccga aaaaacacgc caaaggctac atcgaaggtc
    19201 tggaaatgct ggcttcaatg cgcctgtgtg ctaacgttcc tgcgcaacac gccattcaga
    19261 ccgcgctggg tggttatcag agcatcagtg aatttattac ccctggaggt cgtctttatg
    19321 agcagcgtaa ccgcgcgtgg gaactgatca acgatattcc gggcgtttcc tgcgtgaaac
    19381 ctcgtggtgc gctgtatatg ttcccgaaaa tcgacgccaa acgctttaac attcacgacg
    19441 atcagaaaat ggtgctggat ttcctgttgc aggaaaaagt tctgttggtg caagggacgg
    19501 cattcaactg gccgtggccg gatcacttcc gcattgtcac gctaccgcgt gtcgatgata
    19561 tcgagctgtc tttgagcaag ttcgcgcgtt tcctttctgg ttatcatcag ctgtaatctt
    19621 aatttcactg ccggagattg catccggcag cgttatcccg ccacaatgac ctgatgatgt
    19681 catcatacgt aaggtcacta tgaaacagag ccattttttt gcccatctct cccgcctgaa
    19741 actcattaac cgctggccgc taatgcgcaa cgtgctgacg gaaaatgtgt ccgaacacag
    19801 tttgcaggta gcgatggtcg cccatgcgct ggcagctatc aaaaatcgaa aatttggcgg
    19861 taatgtcaac gccgaacgta tcgctttact ggcgatgtac cacgatgcct cagaagtgct
    19921 caccggcgat ctccctactc cggtgaaata cttcaattcg caaatcgctc aggagtacaa
    19981 ggctattgaa aaaatcgctc agcaaaaact ggtcgatatg gttccggaag agctgcggga
    20041 tatctttgcg ccgttaattg acgagcatgc atatagcgat gaagaaaaat cgctggtgaa
    20101 acaggcagat gcactgtgtg catatctgaa atgtctggaa gaactcgcgg ccggaaataa
    20161 tgaattcttg ctggcaaaaa cgcgactgga agcgacgctt gaagcgcgtc gcagccagga
    20221 gatggactac ttcatggaag tatttgttcc cagcttccat ctttcgctcg atgagattag
    20281 ccaggattca ccgctgtaag cagccggagt ctgcgtcgca tcaggcaata agcgccggat
    20341 gcgacatcag gctcttgtca aaacggaaac agcatcggga tcatcaccac acaaaccgcc
    20401 atcacgataa tggtgaacgg tacccccaac ttcacaaagt cactgaagct gtaatttccc
    20461 ggacctaaaa ccagtgtgtt aacaggtgaa gaaaccggtg tcataaaggc ggcggatgct
    20521 gccatcgcca cgaccatcgc gaatggataa ggcgacaccc ccatcgtttt ggcagcagcc
    20581 agcgcaatcg gagccatcaa caccgccgtc gcggtattag agataaatag cccaataacc
    20641 gccgacaaga caaacaaaca ccccagcatc atatgtggcc cgtaaccacc gccaatgtcc
    20701 atcagccctt tcaccgccag cgcgacacct cccgttttct gtaatgccac agcaaacggc
    20761 atcatcccaa cgatcaaaat aatgctcggc cagtgaatgg atttataggc gctttcagca
    20821 tctatacagc ggaatttccc catcagcagg caggcgatga tagcggcaac aggattagga
    20881 atttcatctg tcagcattaa cgccaccatt agcaccagac agaaaatggc atggggtgcc
    20941 tggctgtgcg cgggcgatgc ttcactcacc tcttccggta agttcagcgc tacgaagtcg
    21001 cggccctgtt tggccagcat accgatcagt ttccagttac ccacaaccag gatgatatcg
    21061 cccagcagca gaggctcatc cgccagcgaa ccttccagcg ccacgccatt gcgctttagc
    21121 cccaccacat tcagtccgta gcgggtacga aaaccaattt cgcgcaccga tttaccaatc
    21181 agttctgact caggaattaa tgaaatctct gccatgccca catcaagggc ctggtcagaa
    21241 aaatactcgc cgcgcagtac catcggctcc agcaattgct cactacaaaa ttgccggaga
    21301 tcgacatcag ccgcagacat atcaataagc aaaacgtcac gcgcgcgaaa ctcagaaacc
    21361 ccattaacgt tcacgataac gcgacgaaaa cgccgccagc gttcaacacc gatgacgtta
    21421 gcgccataac gctcacgtaa tttgagatca tccagccgtt gaccaatcat tgccgatccg
    21481 gggcgaatag ccagacgtcg cgcacgcccg gtcagtcgat attcacggat aagatcgcga
    21541 aaggttcgac gcgtccagcc ttcgcgctgc ggggtctggg tatccccttt cagcatgaaa
    21601 cgcatcacta acatatacaa aatacccagc accagcacga ccaggccaac aggtgttacg
    21661 ctaaagaaac tgaagccgtg atagccttca cgcagcaatt cactgttgac taccaggttc
    21721 ggcggcgtcg ccaccagcgt catcatgccg ctaatcagcc cggcaaaact taacggcatc
    21781 atcagacgtg acggcgaagt ttgcatacgc atggcaacgc ttaacaccac gggaataaag
    21841 atagcgacaa cgccggttga actcataaac gcgccaagcc ccgcgacggt cagcatcaac
    21901 aaaaccaaca ttttgatttc actgttgccc gccactttga ccagccatgt tcccattacg
    21961 gtggcaacac cggtacggac caaaccatcg ccaataataa acaaggcggc aatcaggaca
    22021 acgttaggat cagaaaagcc ggaaaatact tcggggaccg tcagcgttcc gcttaatgca
    22081 aacgcgacaa taacaaacaa agcgaccgca tccatacgca ctctgcccgt cgcaaacaag
    22141 acgatggcaa cggccagtaa tgaaagaacc caaatcaatt caccgttcac aacttatcct
    22201 tgttaattga gggggatgac ttgattctgc cataaaaaag ccccgacgag acggggctaa
    22261 atcatgatca ggtgtttcac tgaataataa catcgccatt tagctgtttg gtcacagtaa
    22321 tttgctccag actgtggagg accaaatcga cctcattcag gcgcggggta tctgccggag
    22381 cgttaaccgc aatgacatgg caacccgccg ccaggccaga aagcacgcca gcgggagcat
    22441 cttccgccac cacacactcc tgcggcgcaa gccccagcag ctgcgcacct aacagatacg
    22501 catcaggttc tggttttccg cgcttcactc gctcagcggt tacaaacacc tctggtgcgg
    22561 gaagcccagc tattttatgg cgcgctcgcg ctaccggcat ggagccagaa gtcacaatgg
    22621 cccacggaat acctgcttta ttcaaatgat tgagtaaggc gattgccccc ggaagcgcgg
    22681 taataccttc gttttccgtg gcctcgatgt gctccagacg cgtaaactcg gcggcaatat
    22741 cagcctcgga tttgcccgcc ataaaatggc gcaaagaggt gatcgcctgt ttaccgtgaa
    22801 tgaaagccag cacctcttcc ggcgctaacc catgacgtct ggcccagttg ctccacgccc
    22861 gttctaccgc aggcagggaa tccaccagcg ttccatcaag atcaaacaga aaacctttgc
    22921 accgcacgcg ggcctcctca ggcgttgata atttgattaa tttcgttggc gctcaaatgg
    22981 tactgacgcg ggcaggcatg ccacacatta agcatgcgct gatatttttc ccacattggc
    23041 gtctgggcgt taaaaccatg agtcccagcg tcaaaatggg tatagcgccc ttccacatta
    23101 accataaagc ggacataacc gaggtaacgt gcttcagtgg cggcgtcaaa gccgaggaag
    23161 gtgacacgac gttcatcgat ggattgctgg tcctgcaaat tagaccagga aacatgcaac
    23221 gcatgataca tctccataat gtcgatgata gtgcggcagg tttcttcttt cagctcgcca
    23281 aactcgcgat ccaattcacg catctgtaat ccgtaaccac gctcaataat tgtttgcagg
    23341 cgacggtaac gttcagcatt tgccggatcg agcatagtca tcatcttgta ctgattagac
    23401 aaaataagac gttgcgcgtt ggtcatttcc attgttgact cctgtatcac tctactacgg
    23461 tgaaaaaaaa gaaggctgag tatgccttct tttatatgcg taatcagggg tcaattacaa
    23521 atcatcaagg aaagttttat ccagttgttt gaaggcgcgc ttaagcgtgt cagctaatgc
    23581 ctggtaatca ggcttgcctt caacgggtgc caacacctgt ccagactcct gcaatttacc
    23641 gcgaacttca taaaaccagt tgaggatagc agggggtaat ggcgttacag aacgcttgcc
    23701 cagccaccat aatccctgca tgggtaaact taaggcgaac agcgcagtgg caactgccgg
    23761 cccaagctga ccgcccaggg caatctgcca gcagagagta aatacggcga tcggcggcat
    23821 aaaacggatc gcataacgcg tcatcttgat aacgcgattt tcgacaaaga ccggggcaag
    23881 gcgtttttcc agcggccacg tctttgagta atgctgtccc cggcgaaaca agctaaaaaa
    23941 attaacagaa cgattatccg gcgttgacat gcttcacctc aacttcacat ataaagattc
    24001 aaaaatttgt gcaaattcac aactcagcgg gacaacattc aaaacatttt gtcttccata
    24061 cccactatca ggtatccttt agcagcctga aggcctaagt agtacatatt cattgagtcg
    24121 tcaaattcat atacattatg ccattggctg aaaattacgc aaaatggcat agactcaaga
    24181 tatttcttcc atcatgcaaa aaaaatttgc agtgcatgat gttaatcata aatgtcggtg
    24241 tcatcatgcg ctacgctcta tggctccctg acgttttttt agccacgtat caattatagg
    24301 tacttccatg tcgagtaagt tagtactggt tctgaactgc ggtagttctt cactgaaatt
    24361 tgccatcatc gatgcagtaa atggtgaaga gtacctttct ggtttagccg aatgtttcca
    24421 cctgcccgaa gcacgtatca aatggaaaat ggacggcaat aaacaggaag cggctttagg
    24481 tgcaggcgcc gctcacagcg aagcgctcaa ctttatcgtt aatactattc tggcacaaaa
    24541 accagaactg tctgcgcagc tgactgctat cggtcaccgt atcgtacacg gcggcgaaaa
    24601 gtataccagc tccgtagtga tcgatgagtc tgttattcag ggtatcaaag atgcagcttc
    24661 ttttgcaccg ctacacaacc cggctcacct gatcggtatc gaagaagctc tgaaatcttt
    24721 cccacagctg aaagacaaaa acgttgctgt atttgacacc gcgttccacc agactatgcc
    24781 ggaagagtct tacctctacg ccctgcctta caacctgtac aaagagcacg gcatccgtcg
    24841 ttacggcgcg cacggcacca gccacttcta tgtaacccag gaagcggcaa aaatgctgaa
    24901 caaaccggta gaagaactga acatcatcac ctgccacctg ggcaacggtg gttccgtttc
    24961 tgctatccgc aacggtaaat gcgttgacac ctctatgggc ctgaccccgc tggaaggtct
    25021 ggtcatgggt acccgttctg gtgatatcga tccggcgatc atcttccacc tgcacgacac
    25081 cctaggcatg agcgttgacg caatcaacaa actgctgacc aaagagtctg gcctgctggg
    25141 tctgaccgaa gtgaccagcg actgccgcta tgttgaagac aactacgcga cgaaagaaga
    25201 cgcgaagcgc gcaatggacg tttactgcca ccgcctggcg aaatacatcg gtgcctacac
    25261 tgcgctgatg gatggtcgtc tggacgctgt tgtattcact ggtggtatcg gtgaaaatgc
    25321 cgcgatggtt cgtgaactgt ctctgggcaa actgggcgtg ctgggctttg aagttgatca
    25381 tgaacgcaac ctggctgcac gtttcggcaa atctggtttc atcaacaaag aaggtacccg
    25441 tcctgcggtg gttatcccaa ccaacgaaga actggttatc gcgcaagacg cgagccgcct
    25501 gactgcctga tttcacaccg ccagctcagc tggcggtgct gttttgtaac ccgccaaatc
    25561 ggcggtaacg aaagaggata aaccgtgtcc cgtattatta tgctgatccc taccggaacc
    25621 agcgtcggtc tgaccagcgt cagccttggc gtgatccgtg caatggaacg caaaggcgtt
    25681 cgtctgagcg ttttcaaacc tatcgctcag ccgcgtaccg gtggcgatgc gcccgatcag
    25741 actacgacta tcgtgcgtgc gaactcttcc accacgacgg ccgctgaacc gctgaaaatg
    25801 agctacgttg aaggtctgct ttccagcaat cagaaagatg tgctgatgga agagatcgtc
    25861 gcaaactacc acgctaacac caaagacgct gaagtcgttc tggttgaagg tctggtcccg
    25921 acacgtaagc accagtttgc ccagtctctg aactacgaaa tcgctaaaac gctgaatgcg
    25981 gaaatcgtct tcgttatgtc tcagggcact gacaccccgg aacagctgaa agagcgtatc
    26041 gaactgaccc gcaacagctt cggcggtgcc aaaaacacca acatcaccgg cgttatcgtt
    26101 aacaaactga acgcaccggt tgatgaacag ggtcgtactc gcccggatct gtccgagatt
    26161 ttcgacgact cttccaaagc taaagtaaac aatgttgatc cggcgaagct gcaagaatcc
    26221 agcccgctgc cggttctcgg cgctgtgccg tggagctttg acctgatcgc gactcgtgcg
    26281 atcgatatgg ctcgccacct gaatgcgacc atcatcaacg aaggcgacat caatactcgc
    26341 cgcgttaaat ccgtcacttt ctgcgcacgc agcattccgc acatgctgga gcacttccgt
    26401 gccggttctc tgctggtgac ttccgcagac cgtcctgacg tgctggtcgc cgcttgcctg
    26461 gcagccatga acggcgtaga aatcggtgcc ctgctgctga ctggcggcta cgaaatggac
    26521 gcgcgcattt ctaaactgtg cgaacgtgct ttcgctaccg gcctgccggt atttatggtg
    26581 aacaccaaca cctggcagac ctctctgagc ctgcagagct tcaacctgga agttccggtt
    26641 gacgatcacg aacgtatcga gaaagttcag gaatacgttg ctaactacat caacgctgac
    26701 tggatcgaat ctctgactgc cacttctgag cgcagccgtc gtctgtctcc gcctgcgttc
    26761 cgttatcagc tgactgaact tgcgcgcaaa gcgggcaaac gtatcgtact gccggaaggt
    26821 gacgaaccgc gtaccgttaa agcagccgct atctgtgctg aacgtggtat cgcaacttgc
    26881 gtactgctgg gtaatccggc agagatcaac cgtgttgcag cgtctcaggg tgtagaactg
    26941 ggtgcaggga ttgaaatcgt tgatccagaa gtggttcgcg aaagctatgt tggtcgtctg
    27001 gtcgaactgc gtaagaacaa aggcatgacc gaaaccgttg cccgcgaaca gctggaagac
    27061 aacgtggtgc tcggtacgct gatgctggaa caggatgaag ttgatggtct ggtttccggt
    27121 gctgttcaca ctaccgcaaa caccatccgt ccgccgctgc agctgatcaa aactgcaccg
    27181 ggcagctccc tggtatcttc cgtgttcttc atgctgctgc cggaacaggt ttacgtttac
    27241 ggtgactgtg cgatcaaccc ggatccgacc gctgaacagc tggcagaaat cgcgattcag
    27301 tccgctgatt ccgctgcggc cttcggtatc gaaccgcgcg ttgctatgct ctcctactcc
    27361 accggtactt ctggtgcagg tagcgacgta gaaaaagttc gcgaagcaac tcgtctggcg
    27421 caggaaaaac gtcctgacct gatgatcgac ggtccgctgc agtacgacgc tgcggtaatg
    27481 gctgacgttg cgaaatccaa agcgccgaac tctccggttg caggtcgcgc taccgtgttt
    27541 atcttcccgg atctgaacac cggtaacacc acctacaaag cggtacagcg ttctgccgac
    27601 ctgatctcca tcgggccgat gctgcagggt atgcgcaagc cggttaacga cctgtcccgt
    27661 ggcgcactgg ttgacgatat cgtctacacc atcgcgctga ctgcgattca gtctgcacag
    27721 cagcagtaat ctcgtcatca tccgcagctt tgcgctgcgg atatctgaac cggaaataat
    27781 cactatttcc ggttttttat tctcttaatc tgcattaatc ctttctgatt atcttgctta
    27841 actgcgctgc atcaatgaat tgcgccattt cactttgcat acttaccact ttgttttgtg
    27901 caagggaata tttgcgctat gtccgcaatc actgaatcca aaccaacaag aagatgggca
    27961 atgcccgata cgttggtgat tatctttttt gttgctattt taaccagcct tgccacctgg
    28021 gtagttccgg tggggatgtt tgacagtcag gaagtgcagt atcaggttga tggtcaaaca
    28081 aaaacacgca aagtcgtaga tccacactca tttcgcattc tgactaacga agcaggcgaa
    28141 cctgagtatc accgcataca gctgttcacg acgggcgatg aacgcccggg cctgatgaac
    28201 ttcccgtttg aaggattaac ctcaggatcg aaatacggga cagctgttgg catcatcatg
    28261 tttatgcagg tgattggtgg cgcgtttggc attgtgatgc gtacaggaac cattgataac
    28321 ggtatcctgg cgcttattcg ccatacccgc gggaatgaaa ttctctttat tcctgcgctg
    28381 tttattctgt tttcacttgg cggcgcggta tttggtatgg gagaagaggc cgtcgccttt
    28441 gccattatca tcgcaccgct aatggtccgg ctgggctatg acagtattac caccgtcctg
    28501 gtgacctata ttgccacgca aatcggtttt gccagttcgt ggatgaaccc gttttgtgtg
    28561 gtcgttgctc aggggattgc cggcgttccg gtgctttctg gctccgggtt gcgcatcgtg
    28621 gtgtgggtta tcgccactat gattggcctg atctttacca tggtgtacgc ctcacgagtg
    28681 aaaaagaatc ctcttctgtc acgcgtgcat gagtccgacc gcttctttcg tgaaaagcag
    28741 gcggatgttg aacaacgtcc gtttaccttt ggtgactggc tggtattgat tgtcctgacc
    28801 gccgtaatgg tctgggtgat ttggggcgtg atcgttaatg cctggtttat tccagaaatt
    28861 gccagccagt tcttcaccat gggtctggtg attggcatca tcggcgttgt tttccgcctt
    28921 aacggcatga cggttaatac catggcttca tcctttaccg aaggggcgcg aatgatgatc
    28981 gcccctgccc tgctggtggg tttcgccaaa gggattttgc tgctggtcgg taatggtgaa
    29041 gcgggtgatg ccagcgtgtt aaataccatc ctcaacagca ttgccaatgc cattagcggt
    29101 ctggacaacg cggtcgcggc ctggtttatg ttgctcttcc aggcggtatt taatttcttc
    29161 gtgacgtccg gttctggtca ggcggcgtta accatgccgt tactggcacc gcttggcgat
    29221 ctggtcggtg ttaaccgtca ggttaccgtg ctggcattcc agtttggtga tggcttcagt
    29281 cacatcattt acccaacctc agcttcgtta atggcaactc tcggtgtgtg cagggtggac
    29341 ttccgtaact ggctgaaggt gggcgcgccc ctacttggac tgctgtttat tatgtccagc
    29401 gtcgtagtga tcggcgctca gttgatgggc taccactaaa aatgttaaga gccgcaattg
    29461 cggctctttt ttcattctgc cgtttcagtc tctacggctt catttttggc attgcgcttc
    29521 atccacaacg ccagcgcttt cagcgagtct ggagtgaact catcgcagcg tgcggtgatt
    29581 tcttccggcg tcagccagca aacttcactg acttcatctt cctgtagggc gaagggaccg
    29641 tgagagacgc agctgaacaa cgcgccccag acacggcaat ttttatcttc gaaatagaac
    29701 tgcccgtgct cggcaaaggg gacaccggca atgcccaact cttcttccgc ttcgcgacgc
    29761 gcggattcca gcagttgctc atcggcctga accacaccgc ctgcggtcgc atctaacatg
    29821 ccgggtaaaa agtcttttgt ctcggtacga cgctggacca gaattttgcc catgccatca
    29881 tgcacgacga tgtaagttgc acgatgacgc agacactgtg cccgcatttg ttcccggctg
    29941 gcttgtgcaa tgacttcgtt ctcttcattg acaatatcca cccattcagt acttgccaaa
    30001 cgacgctgtt ccattatcag gaaaccttct ttttctggcg ctcttacggc gcattttgag
    30061 ttgtgggtaa attacggatt aatcgcgacc tgcgcaatga tactttgatc attgagtgcg
    30121 attacactaa gtacgtcatt atccagcatg ccataactcg ccggattacc gcctttcgga
    30181 atactcaccg agccggggtt gaagtggaaa atctcccccc gctgttctgc cactggcaga
    30241 tgggtatgac cgtacaccag cacatcgttc tggtttaaag caggtagatt ttccgggcca
    30301 aaaagatgac catgcgtcaa aaacagacgt tgtttttcca gtaatacctg ttgccacggc
    30361 gcggttatcg ggaaatgcag cagcatttga tccacttcgc tgtcgcagtt gccgcgcaca
    30421 gcgataacct tatgtgccac ttcattaagc cgttcagcga ctttggctgg cgcgtaaccc
    30481 tccggtaaag cattacgcgg gccgtgattc aacacgtcgc caaggatcac cagccactgg
    30541 gcaccgcttt gggcaaacaa ctccagaaca cgttccgtcg ccggtaacga cccatgaatg
    30601 tccgatgcaa acatcagttt catcactcac tcctcgtcga aaaaacgtaa gttatgatac
    30661 tggattctgt cgttgctatc agccagattg cttcgccgaa agtgcaataa aacgctggac
    30721 agacgctcgc tgccactgga atgtcgcata atccaccagg cgttctggca cctcatcgcc
    30781 atgtagtacc aggcggttaa tcattagcgc cagatcagta tcagcaatgc accattcacc
    30841 aaataaattc ggctgaccca gtgctaacaa atgttctgcc atcgcgaaca gtttctctgc
    30901 actggctttt ccctcggccg ttagtggcgc ttttttcgcc cccgcaaaga caacatccgt
    30961 cggacgctct tcgcggatgg gcatcagatc gctgcgcagc caggcctgaa tctgtcgtgc
    31021 acgcgcacga ttttctaaat caagcggata aatacgttcc caggtcggtg gcgcaaatcg
    31081 atcttccaga tactccgcaa tggcagaaga ttcactcaac tcaaaatcat cgatttgtaa
    31141 taacggcaca cggcgtgtct gaccgtaacc ttgccacgtc ggctgcaaat gttcaccgct
    31201 gtcgaggtcg atggtcttga tatgaaacga caggcctttt tcctgcaacg ccacccaagc
    31261 ggataacaca taaggggaga aaaagtgggc atctgaccaa agcgtgatag cgggtttact
    31321 cattatgtcc tcggcaataa agggggctgg ctatcaaact atagagcctt tttgtcactg
    31381 tcacgtgacg aatactcacg taagtcgccg cgctttctat actggtggtg ttcagatgat
    31441 taaacaaccg gagctgcaat gatcgatctc tatttcgccc cgacacccaa tggtcacaaa
    31501 attacgctgt ttctcgaaga agcagagctt gattatcgct tgattaaggt agacctgggg
    31561 aaaggcggtc agtttcgtcc ggaatttttg cgcatttcgc ccaacaacaa aattccggca
    31621 attgttgatc attctcctgc cgatggcggc gaaccgctaa gcctctttga atctggtgcc
    31681 attttgttgt atctggctga gaaaacgggg ctctttttga gtcatgaaac gcgtgaacgc
    31741 gccgccacat tacagtggtt attctggcag gtaggcggac tggggccgat gcttgggcaa
    31801 aatcatcatt ttaatcacgc agccccccaa accattcctt acgctattga acgttatcag
    31861 gttgaaactc agcgtcttta ccatgtacta aacaagcggc tggaaaactc gccctagctg
    31921 ggaggcgaga actacagcat tgcggatatt gcctgctggc cgtgggttaa tgcctggact
    31981 cgccagcgaa ttgacctcgc aatgtatccg gcagtcaaga actggcatga gcggatccgt
    32041 tcgcgccctg ccaccgggca ggcactgcta aaagcacaac tcggtgatga gcgttcggat
    32101 agttaacaga aacaggttct cgtgtattat ttcatcctaa gtaaaacaac ggagaacctg
    32161 caatggcaca acctgccgct attattcgta taaagaacct tcgtttacgt acgtttatcg
    32221 gaattaagga agaagaaatt aacaaccgtc aggatattgt tatcaatgtg acgatccact
    32281 accccgccga taaagcgcgc actagcgaag atatcaacga tgcgctgaat tatcgcaccg
    32341 taacgaaaaa cattattcag catgtagaga ataaccgttt ctctttgttg gaaaaattaa
    32401 ctcaggatgt gctcgatatc gcacgtgaac atcactgggt gacgtatgct gaagtggaga
    32461 tcgataaact gcacgcgctg cgctacgccg attcggtatc catgacctta agctggcagc
    32521 gttaaccgcc atatcgggag gctgcatgaa catagtgatc accggaggga cgggattaat
    32581 tggtcgccat ttgattccgc gtttgctgga gctgggccat caaatcacgg tagtgacgcg
    32641 taacccacag aaagccagtt ccgttctcgg ccctcgggtg acgctatggc aagggctagc
    32701 cgatcaaagc aacctcaacg gcgttgatgc ggtaatcaac ctggccggag aaccgattgc
    32761 tgataaacgc tggactcacg agcaaaaaga gcgtctctgc caaagccgct ggaatatcac
    32821 gcaaaaactg gtcgatttga ttaatgccag cgacacgccg ccgtcggtac tcatttccgg
    32881 ctcggcaacg ggctattatg gcgacttagg tgaagtggtg gttaccgaag aggaaccgcc
    32941 gcataacgaa tttactcata aactctgcgc ccgctgggaa gagattgcct gccgggcgca
    33001 aagtgacaaa acgcgagtgt gcctgctgcg aaccggcgtg ctactggcac cggacggcgg
    33061 tattctcggt aaaatgctgc caccgtttcg tcttggcctg ggcgggccga ttgactctgg
    33121 tcggcagtat ctggcctgga ttcatattga tgatatggtc aacggtattc tctggctgct
    33181 ggataacgag ctgcgcgggc catttaatat ggtttcgccc tccccggtac gcaatgaaca
    33241 atttgcccat gcgctcggtc acgcgctgca tcgcccggcc attttgcgcg tccccgcgac
    33301 cgccattcga ctgttaatgg gcgaatcttc agtactggta ttaggtggac aacgcgcgat
    33361 gcctaaacgg ctggaagaag cgggttttgc gtttcgctgg tacgatttag aagaggcgct
    33421 ggcagatgtc gttcgctgat gtggtttaca gcaaacatcc gccagttaac tcccggtgtt
    33481 acaggattag tggctttgcg cgataagatc gtctggtgaa agtcgggtca ccatcataac
    33541 taactctctg tctaaacctc tatccagcat ctcctgagca atacgcaggg cttcttcgtg
    33601 tttgccctgc attgcgcctt cttcacgtaa tctgtcagca atggtcatca gtttctcctt
    33661 ttcttgtggt gcgcgttccg ctatctcacc aataaatgca cgaaaacgct gggcatcccc
    33721 tgtttgtaat acgtaattaa acagggcttt tagctgtctg tcattagtgt tccctgtaac
    33781 tagcagcgaa acaatttggt cgactaatcc caacagatcg cgctgacgaa tatgtttctg
    33841 aattaactcc aacagcgcca ttttgcggtg ttgcataatc tcgtcatccg gcaccacggt
    33901 aatatccacc aacggaaacg ctgatgaata tattttgcgg gctatagcag gctcggcaaa
    33961 ttcatcaagc cagcagagtg aataaggata aggacttctg caaccatgat aaaacagcat
    34021 cgggatcacc aatggaagct ctttatagcc cg
//
LOCUS       DADMHC010000023        32835 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.023, whole genome shotgun sequence.
ACCESSION   DADMHC010000023 DADMHC010000000
VERSION     DADMHC010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 32835)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32835)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32835
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.023"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(187..2508)
                     /locus_tag="JNZ57_000874"
     CDS             complement(187..2508)
                     /locus_tag="JNZ57_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HAY8827181.1"
                     /translation="MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEI
                     TGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELED
                     LYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVDADKGVADTKAALD
                     GARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTV
                     PSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRK
                     GVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDP
                     GLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASR
                     ETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRL
                     QDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTR
                     VAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDAS
                     TVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEK
                     PGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS
                     LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQ
                     NNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR"
     gene            complement(2605..3117)
                     /gene="greB"
                     /locus_tag="JNZ57_000875"
     CDS             complement(2605..3117)
                     /gene="greB"
                     /locus_tag="JNZ57_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709179.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HAY8827182.1"
                     /translation="MRIIKQTKGINEMKTPLVTREGYEKLKQELNYLWREERPEVTKK
                     VTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCMENLKIVDYSPQQEGKVFFGAW
                     VEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASW
                     YVNAIEYVKP"
     gene            3309..4028
                     /gene="ompR"
                     /locus_tag="JNZ57_000876"
     CDS             3309..4028
                     /gene="ompR"
                     /locus_tag="JNZ57_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018150685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator OmpR"
                     /protein_id="HAY8827183.1"
                     /translation="MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLL
                     TRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDY
                     IPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMP
                     LTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAH
                     PRYIQTVWGLGYVFVPDGSKA"
     gene            4025..5377
                     /gene="envZ"
                     /locus_tag="JNZ57_000877"
     CDS             4025..5377
                     /gene="envZ"
                     /locus_tag="JNZ57_000877"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     EnvZ"
                     /protein_id="HAY8827184.1"
                     /translation="MRRLRFSPRSSFARTLLLIVTLLFASLVTTYLVVLNFAILPSLQ
                     QFNKVLAYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLRWA
                     QHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPL
                     FRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTR
                     AFNHMAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMSEQDGYLAESINKDIEE
                     CNAIIEQFIDYLRTGQEMPMEMADLNAVLGEVIAAESGYEREIETALYPGSIEVKMHP
                     LSIKRAVANMVVNAARYGNGWIKLSSGTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVR
                     GDSARTISGTGLGLAIVQRIVDNHNGMLELGTSERGGLSIRAWLPVPVTRAQGTTKEG
                     "
     gene            complement(5453..7075)
                     /gene="pckA"
                     /locus_tag="JNZ57_000878"
     CDS             complement(5453..7075)
                     /gene="pckA"
                     /locus_tag="JNZ57_000878"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HAY8827185.1"
                     /translation="MRVNNGLTPQELEAYGISDVHDIVYNPSYDLLYQEELDPSLTGY
                     ERGVLTNLGAVAVDTGIFTGRSPKDKYIVRDDTTRDTFWWADKGKGKNDNKPLSPETW
                     QHLKGLVTRQLSGKRLFVVDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPSDEEL
                     AGFKPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSM
                     MNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDD
                     GVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGTIDFDDGSKTENTRV
                     SYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLA
                     GTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWNGTGKRI
                     SIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQE
                     KAETLAKLFIDNFDKYTDTPAGAALVAAGPKL"
     gene            7453..9177
                     /locus_tag="JNZ57_000879"
     CDS             7453..9177
                     /locus_tag="JNZ57_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4153 domain-containing protein"
                     /protein_id="HAY8827186.1"
                     /translation="MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGV
                     PATVAFSSVLLFSVISFKQKRLWGWLALVFIATTGMSGWLKWQTDGMNPWRAEKAIWD
                     FGCYLLLMAMLLLPWIQQSLRIRNGSSRYSYFYQSVWHNVLILLVIFLANGLTWLVLL
                     LWGELFKLVGIKFFNTLFFATDWFMYLTLGLVTALAVILARTQSRLIDSIQKLFTLIA
                     TGLLPLVSLLTLMFIITLPFTGLSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASL
                     PWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQGALAVLVLLVWSLGY
                     FVSIVWRNGQNPLVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKN
                     TPDQVTIYMLEQSGRYGRAALESLKSDAGFMKDPKRSRDLLMALDGEQHLQEQVSEKV
                     LAENVLIAPGSVKPDATFWSALIQDRYNVMTCIEKDACVLVEQDLNSDGQAERILFAF
                     NDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTRPKAWRDLTVDGE
                     TLEINLSK"
     gene            complement(9312..10190)
                     /gene="hslO"
                     /locus_tag="JNZ57_000880"
     CDS             complement(9312..10190)
                     /gene="hslO"
                     /locus_tag="JNZ57_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417860.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HAY8827187.1"
                     /translation="MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNV
                     LAELLVATSLLTATLKFDGDITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPENA
                     DLKTLVGNGYVVITITPSEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGD
                     VDGKPATGGMLLQVMPAQNAQQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEV
                     TVYDPQDVEFKCTCSREHCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMD
                     IAEIRNNASPADPQVH"
     gene            complement(10215..10616)
                     /gene="hslR"
                     /locus_tag="JNZ57_000881"
     CDS             complement(10215..10616)
                     /gene="hslR"
                     /locus_tag="JNZ57_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated heat shock protein Hsp15"
                     /protein_id="HAY8827188.1"
                     /translation="MKEKPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSK
                     PSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMAMAR
                     KLNALTMPHPDRRPDKKERRDLLRFKHGDSE"
     gene            complement(10627..11295)
                     /gene="yrfG"
                     /locus_tag="JNZ57_000882"
     CDS             complement(10627..11295)
                     /gene="yrfG"
                     /locus_tag="JNZ57_000882"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP/IMP nucleotidase"
                     /protein_id="HAY8827189.1"
                     /translation="MHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNG
                     VTPQEAMEYMRQQYHDVQHTLNWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFL
                     EALKASGKQRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAE
                     ATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLI
                     PSLM"
     gene            complement(11360..13495)
                     /gene="igaA"
                     /locus_tag="JNZ57_000883"
     CDS             complement(11360..13495)
                     /gene="igaA"
                     /locus_tag="JNZ57_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular growth attenuator protein IgaA"
                     /protein_id="HAY8827190.1"
                     /translation="MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRK
                     LTPEERSAVENYLESLTQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGIST
                     DDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETR
                     GYALQPVPSTQASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFF
                     CLITPDVFVPWLAGGALLLLGAGLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQE
                     QINNISLGIIDLVYPAHWQPYIAQDLDQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPL
                     QHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRV
                     GDTLRISGTGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDTRSLPLPESELVNKATAL
                     TEAVNRQLHPKPEDESRVSASLRSAIQKSGMVLLDDFGDIVLKTADLCSAKDDCVRLK
                     NALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFITHETARA
                     AQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPLQEQWNAFQKLAQMLMHTPFNA
                     EGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQR
                     HRTRMMEIQAYYESCLNPQLITPSESLIE"
     gene            13820..14380
                     /gene="nudE"
                     /locus_tag="JNZ57_000884"
     CDS             13820..14380
                     /gene="nudE"
                     /locus_tag="JNZ57_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP compounds hydrolase NudE"
                     /protein_id="HAY8827191.1"
                     /translation="MSKSLQKPTILNVETVARSRLFTVESVDLEFSNGVRRVYERMRP
                     TNREAVMIVPIVDDHLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGF
                     GANDLTFLKKLSMAPSYFSSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLLE
                     DPDFNEARNVSALFLVREWLKGQGRV"
     gene            complement(14545..17097)
                     /gene="mrcA"
                     /locus_tag="JNZ57_000885"
     CDS             complement(14545..17097)
                     /gene="mrcA"
                     /locus_tag="JNZ57_000885"
                     /EC_number="2.4.1.129"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312265.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase/peptidoglycan
                     DD-transpeptidase MrcA"
                     /protein_id="HAY8827192.1"
                     /translation="MKFVKYFLILAVCCILLGAGSIYGLYRYIEPQLPDVATLKDVRL
                     QIPMQIYSADGELIAQYGEKRRIPVTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIF
                     RAASVALFSGHASQGASTITQQLARNFFLSPERTLMRKIKEVFLAIRIEQLLTKDEIL
                     ELYLNKIYLGYRAYGVGAAAQVYFGKTVDQLTLNEMAVIAGLPKAPSTFNPLYSMDRA
                     VARRNVVLSRMLDEGYITQQQFDQTRTEAINANYHAPEIAFSAPYLSEMVRQEMYNRY
                     GESAYEDGYRIYTTITRKVQQAAQQAVRNNVLDYDMRHGYRGPANVLWKVGESAWDNN
                     KITDTLKALPTYGPLLPAAVTSANPQGATAMLADGSTVALSMEGVRWARPYRSDTQQG
                     PTPRKVTDVLQTGQQIWVRQVGDAWWLAQVPEVNSALVSINPQNGAVMALVGGFDFNQ
                     SKFNRATQALRQVGSNIKPFLYTAAMDKGLTLASMLNDVPISRWDAGAGSDWQPKNSP
                     PQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQNIVHTESLALGSA
                     SFTPMQVARGYAVMANGGFLVDPWFISKIENDQGGVIFEAKPKVACPECDIPVIYGDT
                     QKSNVLENNDVEDVAISREQQNVSVPMPQLEQANQALVAKTGAQEYAPHVINTPLAFL
                     IKSALNTNIFGEPGWQGTGWRAGRDLQRRDIGGKTGTTNSSKDAWFSGYGPGVVTSVW
                     IGFDDHRRNLGHTTASGAIKDQISGYEGGAKSAQPAWDAYMKAVLEGVPEQPLTPPPG
                     IVTVNIDRSTGQLANGGNSREEYFIEGTQPTQQAVHEVGTTIIDNGEAQELF"
     gene            17217..17996
                     /gene="hofM"
                     /locus_tag="JNZ57_000886"
     CDS             17217..17996
                     /gene="hofM"
                     /locus_tag="JNZ57_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofM"
                     /protein_id="HAY8827193.1"
                     /translation="MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDII
                     KDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWL
                     SGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPD
                     ASALQRFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALFVDPDS
                     VAICGEGGFDPWEAVSVRQPLLPPPGGDFAIALGLALGKAY"
     gene            17996..18535
                     /locus_tag="JNZ57_000887"
     CDS             17996..18535
                     /locus_tag="JNZ57_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofN"
                     /protein_id="HAY8827194.1"
                     /translation="MNPPINFLPWRQQRRTAFLRFWLLMFVAPLLLAVGITLILRLTG
                     SAEARIDAVLLQAEQQLARSLQITKPRLLEQQQLREQRSQRQRQRQFTRDWQSALEAL
                     AALLPEHAWLTTISWQQGTLEIKGLTTSITALNALETSLRQDASFHLNQRGATQQDAQ
                     GRWQFEYQLTRKVSDEHVL"
     gene            18519..18959
                     /gene="hofO"
                     /locus_tag="JNZ57_000888"
     CDS             18519..18959
                     /gene="hofO"
                     /locus_tag="JNZ57_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofO"
                     /protein_id="HAY8827195.1"
                     /translation="MNMFFDWWFATSPRLRQFCWAFWLLMLVTLIFLSSTHHEERDAL
                     IRLRASHHQQWATLYRLVDTTPFSEEKTLPFSPLDFQLPGAQLVSWHPSAQGGELALK
                     TLWEAVPSAFTRLAERNVSVSRFSLSVEGDDLLFTLQLETPHEG"
     gene            18949..19353
                     /gene="hofP"
                     /locus_tag="JNZ57_000889"
     CDS             18949..19353
                     /gene="hofP"
                     /locus_tag="JNZ57_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofP"
                     /protein_id="HAY8827196.1"
                     /translation="MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMV
                     GRGERIIGVIKDGQKKWRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQ
                     GDTNEAMDSRTTVDADTRRTGGKAAKSDADGG"
     gene            19265..20503
                     /gene="hofQ"
                     /locus_tag="JNZ57_000890"
     CDS             19265..20503
                     /gene="hofQ"
                     /locus_tag="JNZ57_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA uptake porin HofQ"
                     /protein_id="HAY8827197.1"
                     /translation="MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQE
                     KLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIA
                     RQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMIVDKRTNRLLLRDN
                     KTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTT
                     LGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIK
                     QGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA
                     DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG
                     KEYERRELVVFITPRLVSSE"
     gene            20904..21425
                     /gene="aroK"
                     /locus_tag="JNZ57_000891"
     CDS             20904..21425
                     /gene="aroK"
                     /locus_tag="JNZ57_000891"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004709337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroK"
                     /protein_id="HAY8827198.1"
                     /translation="MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTG
                     ADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVY
                     LETTIEKQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAK
                     VVANQIIHMLESN"
     gene            21482..22570
                     /gene="aroB"
                     /locus_tag="JNZ57_000892"
     CDS             21482..22570
                     /gene="aroB"
                     /locus_tag="JNZ57_000892"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HAY8827199.1"
                     /translation="MERIVVTLGERSYPITIASGLFNEPASFLPLKSGEQVMLVTNET
                     LAPLYLDKVRGVLEQAGVNVDSVILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVAL
                     GGGVVGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAANHPLGKNMIGAFYQP
                     ASVVVDLDCLKTLPPRELVSGLAEVIKYGIILDGAFFNWLEENLDALLRLDGPAMAYC
                     IRRCCELKAEVVAADERETGLRALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAA
                     RTSERLGQFSSAETQRIITLLKRAGLPVNGPREMSAQAYLPHMLRDKKVLAGEIRLIL
                     PLAIGKSEVRSGVSHELVLNAIADCQSA"
     gene            22662..23948
                     /gene="damX"
                     /locus_tag="JNZ57_000893"
     CDS             22662..23948
                     /gene="damX"
                     /locus_tag="JNZ57_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein DamX"
                     /protein_id="HAY8827200.1"
                     /translation="MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDI
                     ELDDTDDRRPTRAQKERNEEPEIEEEIDESEDETVDEERVERRPRKCKKAASKPASRQ
                     YMMMGVGILVLLLLIIGIGSALKAPSTSSSDQTASGEKSIDLAGNATDQANGVQPAPG
                     TTSAENTQQDVSLPPISSTPTQGQTPAATDGQQRVEVQGDLNNALTQPQNQQQLNNVA
                     VNSTLPTEPATVAPVRNGNASRDTAKTQTAERPSTTRLARQQAVIEPKKPQATVKTEP
                     KPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTA
                     GNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGV
                     YASKEEAKKAVSTLPADVQAKNPWAKPLRQVQADLK"
     gene            24055..24891
                     /gene="dam"
                     /locus_tag="JNZ57_000894"
     CDS             24055..24891
                     /gene="dam"
                     /locus_tag="JNZ57_000894"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine-specific DNA-methyltransferase"
                     /protein_id="HAY8827201.1"
                     /translation="MKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLN
                     TDFSRYILADINSDLISLYNIVKMRTDEYVQAARELFVPETNCAEVYYQFREEFNKSQ
                     DPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKAQNAFF
                     YCESYADSMARADDASVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVE
                     RHIPVLISNHDTMLTREWYQRAKLHVVKVRRSISSNGGTRKKVDELLALYKPGVVSPA
                     KK"
     gene            24909..25586
                     /gene="rpe"
                     /locus_tag="JNZ57_000895"
     CDS             24909..25586
                     /gene="rpe"
                     /locus_tag="JNZ57_000895"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HAY8827202.1"
                     /translation="MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVP
                     NLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRT
                     LQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLRE
                     VRRRIDESGFDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSE
                     LAKVSHE"
     gene            25579..26337
                     /gene="gph"
                     /locus_tag="JNZ57_000896"
     CDS             25579..26337
                     /gene="gph"
                     /locus_tag="JNZ57_000896"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HAY8827203.1"
                     /translation="MNKFEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEE
                     RVITWIGNGADVLMERALAWARQERATLRKTMGKPPVDDDIPAEEQVRILRKLFDRYY
                     SEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGG
                     DDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGE
                     AIDLSQPDVIYQSINDLLPALGLPHSENQESKND"
     gene            26330..27334
                     /gene="trpS"
                     /locus_tag="JNZ57_000897"
     CDS             26330..27334
                     /gene="trpS"
                     /locus_tag="JNZ57_000897"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HAY8827204.1"
                     /translation="MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQ
                     HAITVRQDAQKLRKATLDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFG
                     ELSRMTQFKDKSARYAENINAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRDI
                     AQRFNALYGEIFKVPEPFIPKSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVK
                     KIKRAVTDSDEPPVVHYDVQNKAGVSNLLDILSAVTGQSIPELEKQFEGKMYGHLKGE
                     VADAVSGMLTELQERYHRFRNDEAFLQQVMKDGAEKASVHASRTLKAVYEAIGFVAKP
                     "
     gene            27603..28508
                     /locus_tag="JNZ57_000898"
     CDS             27603..28508
                     /locus_tag="JNZ57_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709156.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827205.1"
                     /translation="MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELATECRSSVG
                     LTQAVLKTLESSGAIRIERRGRNGSYLVEMDNKALLSHVDINNVVCAMPLPYTRLYEG
                     LASGLKAQFDGIPFYYAHMRGADIRVECLLNGVYDMAVVSRLAAESYLSQNNLCIALE
                     LGPHTYVGEHQLICRKGESGNVKRVGLDSRSADQKIMTDVFFGDSDVERVDLSYHESL
                     QRIVKGDVDAVIWNVVAENELTMLGLEATPLTDDPRFLQATEAVVLTRVDDYPMQQLL
                     RAVVDKHALLAHQQRVVSGEQEPSY"
     gene            28525..28887
                     /locus_tag="JNZ57_000899"
     CDS             28525..28887
                     /locus_tag="JNZ57_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417841.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
                     /protein_id="HAY8827206.1"
                     /translation="METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTM
                     AMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEE
                     GYLLANLYGLWMAANEEV"
     gene            28971..30134
                     /locus_tag="JNZ57_000900"
     CDS             28971..30134
                     /locus_tag="JNZ57_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfX family PLP-dependent enzyme"
                     /protein_id="HAY8827207.1"
                     /translation="MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQVLENGKR
                     LIETARLYGIELYLMTKQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLSVAHQ
                     GHLVQIPCHQVADAVEQGTDVITVFTLDKAREVSAAAVKAGRVQFVLLKVYSDDDFLY
                     PGQESGFVQHSLHEVVAEIKKLPGLHLAGLTHFPCLLWDEAAGKVLPTPNLHTLIQAR
                     DQLAKSGIALEQLNAPSATSCTSLPLLAQYGVTHAEPGHALTGTIPANQQGDQSERIA
                     MLWLSEISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITETNLKTVDDSSIDYTL
                     SLAGEFPVSSAVVLCFRTQIFVTRSDVVLVSGIHRGEPKIVGRYDSLGNSLGA"
     gene            30134..31360
                     /locus_tag="JNZ57_000901"
     CDS             30134..31360
                     /locus_tag="JNZ57_000901"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HAY8827208.1"
                     /translation="MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQ
                     LPTLEKLGLINALGYAPGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRM
                     PFCDVIDRVEQALVSAGWQVERRGDELQFLWVNQAVAIGDNLEADLGQVYNITANLSV
                     ISFDDAIKIGRIVREQVQVGRVITFGGLLTDSQRILDAAESKEERFIGINAPRSGAYD
                     NGFQVVHMGYGVDKKVQVPQKLYEAGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMD
                     ITLDEFNTHPTAFICTNIQETDLAGHAEDVARYAERLQVVDRNLARLVDAMQPDDCLV
                     VMADHGNDPTIGHSHHTREVVPLLVYQQGLAATQLGVRTTLSDVGATVCEFFRAPPPQ
                     NGRSFLSSLRFAGDTL"
     gene            31357..32235
                     /locus_tag="JNZ57_000902"
     CDS             31357..32235
                     /locus_tag="JNZ57_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotriesterase-related protein"
                     /protein_id="HAY8827209.1"
                     /translation="MSFDPTGYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLM
                     TRGVRNVIEMTNRYMGRNAQFMLGVMRETGINVVACTGYYQDAFFPEHVVTRSVQELA
                     QEMVDEIEQGIDGTELKAGLIAEIGSSEGKITPLEEKIFIAAALAHNQTGRPISTHTS
                     FSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYP
                     DEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQLRQSGFSQ
                     ADVDVMLRETPYQFFQ"
     gene            32246..32599
                     /locus_tag="JNZ57_000903"
     CDS             32246..32599
                     /locus_tag="JNZ57_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417837.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2620 domain-containing protein"
                     /protein_id="HAY8827210.1"
                     /translation="MKKIGVAGLQREQIKKTIEATAPGSFEVFIHNDMEAAMKVKSGQ
                     LDYYIGACNTGAGAALSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSV
                     EHVEHAIPMLINHLK"
     gene            32611..>32835
                     /locus_tag="JNZ57_000904"
     CDS             32611..>32835
                     /locus_tag="JNZ57_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827211.1"
                     /translation="MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYM
                     NRREAGSIAFGLSIGFVASVGISFTLKTGLL"
BASE COUNT         7635 a         8251 c         8998 g         7951 t
ORIGIN      
        1 ggctaatgtt taattaaggt ttcagttgtt aatgaagtga taaatattgc cggaatatat
       61 tatgagtttg gttgtggaat aaaaaggccg gagatattct ccggcacttt tatgtcaggc
      121 aaggcgttcg ttgccagatg cggcgtgaac gccttatcgc gcaggtttag gggccagtcc
      181 gggcgtttaa cgttttttgc ccattgccgc cgccagcgca tccatcatcg cgctattacc
      241 ggcaggctgc gcttcacgac cgcgtggttt ggctgccggg cggttgtttt gcgggcgttc
      301 attaccgccg ccgcgacggg cgttggtttc gccaggctgc tcgtccagac gcatagtcag
      361 ggcgatacgt ttacgctgaa gatccacttc cagcactttc accttcacaa tgtcgcccgc
      421 tttcaccacg gtatgcggat cttccacaaa cttgttcgac aatgaagaga tgtgaaccag
      481 gccgtcctga tgcacgccga tatcgacaaa cgcgccaaag ttggtgacgt tggtcaccgc
      541 accttcgagg atcatacccg gttgcaggtc gttcattgtc tcgacgccat cggcaaactg
      601 agcggtttta aattccggac gcggatcgcg acccggtttt tccagctctt tgatgatgtc
      661 agttactgtc ggcacaccga atttttcatc agtaaagtca gacgctttca ggttacgcag
      721 ttcgctgctg ttacccatca gatctttcag tgcctgctgt gttgctgcca gaatgcgttc
      781 caccaccgga taggcttccg ggtggacggt agaagcatcc agcgggttat caccgtggtt
      841 aatgcgcaag aagcccgcgc actgctcgaa ggctttcggc cccagacggc tgactttcag
      901 cagttgctga cggttctgga actggccgtt ctcatcgcgc caggccacga tgttttgcgc
      961 catcatgcgc gtcaggcccg ccacgcgggt taacagcgga acagaagcag tgttgagatc
     1021 gacgccaacg gcgtttacgc agtcttctac tactgcgtcc agtttgcggg ccagttgcgt
     1081 ctggctgacg tcatgctgat actgacctac gccgatagat ttcggatcga ttttcaccag
     1141 ctccgccagc ggatcctgca aacggcgggc gatagacacc gcgccacgca gcgaaacgtc
     1201 gagatccggg aactcctgcg ctgccagctc ggaagctgag taaaccgacg cgccagcttc
     1261 gctgacgatc actttctgtg cggtcacttt cgggaactgc ttctgcacgt cgagatagaa
     1321 acgttcagtt tcgcgggaag ctgtaccgtt gccgatcgcc accagttcaa cgttatgttt
     1381 ttcacacaag gcagcaacgg tcatcgctgc ttttgcggct tgtccggtgt gcgggtaaat
     1441 ggtatcggtc gctaccagtt tgccagtggc atcgaccacc gccactttta ccccagtacg
     1501 cagacccgga tcgaggccca tcgttgcacg cagtccggca ggggccgcca tcagcagatc
     1561 gtgcaggtta cgggcaaaga cgttgattgc ttcatcttcc gcgcgttcgc gcacggtacc
     1621 catcagttcg gtttccagat gcatcagcac cttgatgcgc caggtccagc tcactacgcc
     1681 tttgcgccag ctatccgccg gggcattgtt caggcgcagg ccaaggtgat ccatgatgat
     1741 ttgctcgcaa tagctctctt tgggcggctc atcgaactgc ggatcggcat tcagcgaaag
     1801 ctggagtacg ccttcgttac gcccacggaa catcgccagc gcgcggtgag aaggcaccgt
     1861 ggacaacggt tcgtgatgat cgaaatagtc gcggaatttc gccccttcct cttctttacc
     1921 gctcaccacc gtagaaacca aatgcgcgtt cttccacaga taatcacgca ctttcgccag
     1981 cagcgcggca tcttcggcaa accgttccat caggatatag cgcgcgccat ccagcgcggc
     2041 tttggtatct gccacgcctt tatcggcatc aacatattgt gcagcggcga cttctggcgt
     2101 gtgtgacgga tcgctccaca gcaggtcagc caacggctca agccctgctt caatggcgat
     2161 ttgcccgcgg gtgcggcgtt taggtttgta gggcaggtag aggtcttcga gttcggtttt
     2221 gcttagggtg gcgttgatgg ccttcgccag atcatcggtg agtttgcctt gctcggaaat
     2281 ggacttgagg atcgcctgac gtctctcttc cagctcgcgc agatagctca gacgcgtttc
     2341 cagattacgc agctgcgtgt catccagacc gccggtgatt tccttacgat aacgtgcgat
     2401 aaacggcacg gtattccctt cgtcaagcag gcgaacggca gcgtcaacct gttccgggcg
     2461 cgcctgaatt tcacccgcaa taatgcggca gaacgaatca ttcatcatgg tttgagttca
     2521 tcttttcgga tcaaaaatca ggggatagtt atacggactg gctggcaaaa atgccagcca
     2581 tcggcaggag gttaagactc ttccttacgg tttcacgtac tcgatagcat taacatacca
     2641 gctcgcttcc ccggcagggg tattcaccac cgccagatcg ccgacttctt ttttcagcaa
     2701 tgcgcgggcc atcggggaat cgatagagat gtaatcttta cggccaaaaa tttcatcgta
     2761 gccgacaata cggaaacggt gagtcacgcc atcgtcgttt tcaatctcca cccacgcgcc
     2821 aaaaaagact ttgccttcct gctgagggga gtaatcgacg attttgagat tttccatgca
     2881 tttagtgaga tagcgcacgc gacggtcgat ttcacgcaga cgctttttat tatactgata
     2941 gtcagcattt tcgctgcggt cgcccagact tgcggcccag gtcacctttt ttgtgacctc
     3001 cgggcgttct tcacgccaga gataattaag ctcttgtttg agtttttcat acccttcccg
     3061 ggtaaccagg ggcgttttca tctcgttgat tccctttgtc tgtttgataa tgcgcacatt
     3121 gggtataacg tgatcatatc aacagaatca ataatgtttc gccgaataaa ttgtatactt
     3181 aagctgctgt ttaatatgct ttgtaacaat ttaggctgaa attcatacca gatttagctg
     3241 gtgacgaacg tgagcttttt taagaataca cgcttacaaa ttgttgcgaa cctttgggag
     3301 tacaaacaat gcaagagaac tacaagattc tggtggtcga tgacgacatg cgcctgcgtg
     3361 cgctgctgga acgttatctc accgaacaag gcttccaggt tcgaagcgtc gctaatgcag
     3421 aacagatgga tcgcctgctg actcgtgaat ctttccatct tatggtactg gatttaatgt
     3481 tacctggtga agatggcttg tcgatttgcc gacgtcttcg tagtcagagc aacccgatgc
     3541 cgatcattat ggtgacggca aaaggggaag aagtggaccg tatcgtaggc ctggagattg
     3601 gcgctgacga ctacattcca aaaccgttta acccgcgtga actgctggcc cgtattcgtg
     3661 cggtgctgcg tcgtcaggcg aacgaactgc caggcgcacc gtcacaggaa gaggcggtaa
     3721 ttgctttcgg taagttcaaa cttaacctcg gtacgcgcga aatgttccgc gaagatgagc
     3781 cgatgccgct caccagcggt gagtttgcgg tactgaaggc actggtcagc catccgcgtg
     3841 agccgctctc ccgcgataag ctgatgaacc ttgcccgtgg tcgtgaatat tccgcaatgg
     3901 aacgctccat cgacgtgcag atttcgcgtc tgcgccgcat ggtagaagaa gatccagcgc
     3961 atccgcgtta cattcagacc gtttggggcc tgggctacgt ctttgtaccg gacggctcta
     4021 aagcatgagg cgattgcgct tctcgccacg aagttcattt gcccgtacgt tattgctcat
     4081 cgtcaccttg ctgttcgcca gcctggtgac gacttatctg gtggtgctga acttcgcgat
     4141 tttgccgagc ctccagcagt ttaataaagt cctcgcgtac gaagtgcgta tgttgatgac
     4201 cgacaaactg caactggagg acggcacgca gttggttgtg cctcccgctt tccgtcggga
     4261 gatctaccgt gagctgggga tctctctcta ctccaacgag gctgccgaag aggcaggtct
     4321 gcgttgggcg caacactatg aattcttaag ccatcagatg gcacagcaac tgggcggccc
     4381 gacggaagtg cgcgttgagg tcaacaaaag ttcgcctgtc gtctggctga aaacctggct
     4441 gtcgcccaat atctgggtac gcgtgccgct gaccgaaatt catcagggcg atttctctcc
     4501 gctgttccgc tatacgctgg cgattatgct attggcgata ggcggggcgt ggctgtttat
     4561 tcgtatccag aaccgaccgt tggtcgatct cgaacatgct gctttgcagg tcggtaaagg
     4621 gattattcca ccgccgctgc gtgaatatgg cgcgtccgag gtacgttcgg ttacccgcgc
     4681 ctttaaccat atggcggctg gtgttaagca actggcggat gaccgcacgt tgctgatggc
     4741 gggggtaagt catgacttac gcacgccgct gacgcgtatt cgcctggcga ccgagatgat
     4801 gagcgaacag gatggctacc tggccgaatc gatcaataaa gatatcgaag agtgcaacgc
     4861 catcattgag cagtttatcg actacctgcg caccgggcag gagatgccga tggaaatggc
     4921 ggatctcaac gcagtactcg gtgaggttat tgctgccgaa agtggctatg agcgggaaat
     4981 tgaaaccgcg ctttaccccg gcagcattga agtgaaaatg cacccgctgt cgatcaaacg
     5041 cgcggtggcg aatatggtgg tcaacgccgc ccgttacggc aatggctgga tcaaactcag
     5101 cagcgggacg gagccgaatc gcgcctggtt ccaggtggaa gatgacggtc cgggaattgc
     5161 gccggaacaa cgtaagcacc tgttccagcc gtttgtccgc ggcgacagtg cacgcaccat
     5221 tagcggcacg ggattagggc tggcaattgt gcagcgtatc gtggataacc ataacgggat
     5281 gctggagctt ggcaccagcg agcggggcgg gctttccatt cgcgcctggc tgccagtgcc
     5341 ggtaacgcgg gcgcagggca cgacaaaaga agggtaaata aacgggaggc gaaggtgcct
     5401 cccgttttgc tttctataag atactggata gatattctcc agcttcaaat cattacagtt
     5461 tcggaccagc cgctaccagc gcggcacccg caggggtgtc ggtgtattta tcgaagttgt
     5521 cgataaacag tttcgccagg gtttcggctt tttcctgcca ctgttccgga gaagcgtagg
     5581 tgttacgcgg atcgagaatc ttcgtgtcta cgcccggcag ttcggttggg atcgccaggt
     5641 taaacatcgg cagagtgaag gtttctgcat tatccagcga accgttgagg atggcgtcga
     5701 taatggcgcg ggtatcttta atcgagatac gtttgcctgt gccgttccag ccagtgttaa
     5761 ccagataagc ctgcgcgccc gccgcctgca tacgtttcac cagcacttct gcgtactgag
     5821 tcgggtgcag cgacaggaat gccgcgccga agcaagcgga gaaggttggc gtcggttcgg
     5881 tgatgccacg ctcagtaccg gccagtttgg cggtgaagcc agagaggaag tgatactggg
     5941 tttgatcggc agtcaggcga gaaaccggcg gcaacacgcc gaaagcatca gcagtcagga
     6001 agataacctt agtcgcgtgg cccgctttgg aaaccggctt aacgatgtta tcgatgtgat
     6061 agattggata agaaacgcgg gtgttctcgg tttttgaacc atcatcaaag tcgatagtgc
     6121 catcttcacg cacggtgacg ttttccagca gcgcatcacg acggatagcg ttgtagattt
     6181 caggttccgc ttctttcgac agtttgatag tttttgcgta gcagccgcct tcgaaattaa
     6241 acacgccgtc atcgtcccag ccgtgttcgt catcgccaat caggcggcgt ttcgggtcgg
     6301 tggaaagggt ggttttaccg gtgccggaaa ggccgaagaa caccgcaaca tcgcctttct
     6361 cgccaacgtt ggcggagcag tgcatagaag cgataccttt cagcggcagc aggtagttca
     6421 tcatcgagaa catccctttc ttcatttcgc cgccgtacca ggtgccgcca atcagctgca
     6481 tgcgctcggt caggttaaac gccacgaagt tttcggagtt cagaccctgt tctttccact
     6541 gcgggttagt gcacttcgcg ccgttcataa cgataaagtc tggtttgaaa cctgccagct
     6601 cttcatcgct cgggcgaata aacatgtttt tgacaaaatg cgcctgccag gccacttcgg
     6661 tgatgaaacg gacggaaaga cgagtatccg ggttcgcacc acagaaagcg tcgacaacga
     6721 acagacgttt gccggaaagc tgcctggtca ccaggccttt cagatgctgc caggtttccg
     6781 gagagagagg tttgttgtcg ttcttacctt tgcctttgtc tgcccaccag aaagtatcgc
     6841 gagtggtatc gtcacggacg atatacttat cttttggtga acgaccggtg aagatcccgg
     6901 tatcgacggc aacggcaccc agattagtta acaccccgcg ctcataacct gtcaggctcg
     6961 gatcgagctc ttcctgatac agcaggtcgt agcttgggtt gtaaacgata tcatgtacgt
     7021 cactgatacc ataagcctcg agttcttgcg gggtcaaacc attgttaacg cgcatttcac
     7081 tgctccttag ccaatatgta ttgcctgaat agtaaagtct ttttggggtg ttaaccgcga
     7141 caaggctcat agatttacgt atctggagaa attcatattt gacaaaaaac tccgtgattc
     7201 ctgtcacgaa acggttgcta ttatcgcaga aatagcattt taggtgtgga aaatgttctc
     7261 aaaaggttaa atcttggttt atatggcggg aatattgtga gtggaatcgc attccttaat
     7321 gaaattgatg caaattcaat cggtaaagta tcgattcacc acgctaactt tttttgatta
     7381 ttttctgaaa aaagcaaaat actactgccc ggatgcgata attaacccac cttttgattc
     7441 tggataacca acatggataa cgttgaactt tcaccggcaa cacgctgggg gatgattgct
     7501 accggattac ttcaggggct ggtttgctac ctgttgatcg cctggcttgc cggaaaaaat
     7561 cacagttgga ttgtttatgg cgtgcctgcg accgttgcgt tttcatccgt tttactcttc
     7621 tccgtgatct cttttaaaca gaagcgcctt tggggatggc tggcgctggt gtttattgcc
     7681 acgacaggga tgagcggttg gctgaagtgg caaactgatg gcatgaaccc ctggagagct
     7741 gaaaaggcga tttgggattt tggctgctat ctgctgttga tggcaatgtt gttgctaccg
     7801 tggatacaac aaagccttcg tatccgcaat ggcagtagcc gctatagcta cttttaccag
     7861 tcagtatggc ataacgtact tatattactg gtgatttttc tcgccaatgg cctgacgtgg
     7921 ctggtgcttt tactgtgggg tgagttgttt aaacttgttg gcatcaagtt tttcaatacg
     7981 ctcttttttg caaccgactg gtttatgtat cttacattag gtctggttac cgcactggcg
     8041 gtgattctcg cgcgcacaca gtcacgttta atcgactcta ttcaaaagtt gttcacgtta
     8101 atcgccacgg ggttgctgcc gttagtatca ttgctaaccc tgatgtttat catcactctg
     8161 ccgtttacgg gcctgagcgc gatttctcgc cacatctccg ccgccgggtt gctgttaacg
     8221 ctggcctttt tgcaattgat cttaatggct attgtccgcg atccgcaaaa agcgtcactt
     8281 ccctggacgg ggccgttgcg ttgcctgatt aaaaccgctt tgctggttgc tccgctgtat
     8341 gtgttcgttg ccgcctgggc gttatggctg cgggtcgctc agtacggctg gactgtcgac
     8401 cgcttgcagg gcgcgctggc ggtgctggtg ttactggtgt ggtcgctggg gtattttgtc
     8461 agtatcgtct ggcgtaatgg gcaaaatccc cttgttcttc agggcaaagt gaaccttgcg
     8521 gtttcgttat tggtgttggt gatactggtg cttcttaatt cgccggtgct ggacagtatg
     8581 cgtattagcg tgaacagtca tatggcgcgt tatcagagcg gcaaaaacac gccagaccag
     8641 gtaactatct acatgctcga acagagcggt cgctatggac gtgcggcgct tgagtcgctg
     8701 aaaagcgatg ccgggtttat gaaagacccg aaacgctcgc gggatctgct gatggcgtta
     8761 gatggagagc aacatcttca ggaacaggta tcggaaaaag tattagccga aaatgtgtta
     8821 attgcccctg gttctgttaa accggatgcg acattctggt cggccttaat ccaggatcgc
     8881 tataacgtga tgacctgtat tgaaaaagac gcctgcgtcc tggtcgagca agatctgaat
     8941 agtgatggtc aggcggagcg gatcctgttt gcttttaatg atgacagagt cattgtctat
     9001 ggctttgact cagacagaaa agaatgggac gcgcttgata tgagtttact tccgaacgaa
     9061 ataacgaaag aaaaattact cacagctgcg aaggatggaa aactggggac gaggccgaaa
     9121 gcgtggcgcg atctgacggt agatggtgaa acgctggaaa taaacttaag taagtgacaa
     9181 cgcttttatc ggatacgacg ctgtatctga ccaaaataat ttgcgattta tttcataggc
     9241 gctggtaagc gcagcacatc aggccattaa gttgtaaaat ccggcagagc cctctctgcc
     9301 ggacatactc attaatgaac ttgcggatct gccggagacg cgttgttgcg gatttcagca
     9361 atatccatcg cattgaacag atagtggtta ccgcagtaat cacaatgcat gtcaatttcg
     9421 ccatcttccg ccaggatgct atcaacttct tcatcaggca gcgttttcag cgcatcggcg
     9481 caatgttcac gcgagcaggt gcatttgaac tccacatcct gcggatcgta aaccgtcacc
     9541 tcttcttcgt gatacaaacg ccacaacact tcgtttgccg gtaaggtcag cagttcttcg
     9601 gttttgatgg tttcggttag cgtcgccagg tggtcaaagt cgtcctgctg ggcattttgc
     9661 gcaggcatta cctgcaacaa cataccgcct gtagccggtt tgccgtctac gtcgccggtg
     9721 cgaataaaca ggcgcgtcgg cagctgttca gaacgcataa agtaatcttc caggcaggcc
     9781 gccagggtat caccttccag accaactacg ccctgatagc gttcgccttc gctcggggta
     9841 atggtgatca ccacgtaacc attgccgacc agcgttttca ggtcggcatt ttctggaatt
     9901 tcgccctgca cgcgcgccac accgcgcatt tgctggttat tgttaccgtt aataaccgcc
     9961 agattcatcg gaccgtcgcc ctgcagctgt acggtgatat caccatcaaa cttcagcgta
    10021 gcggttaaca ggctggtcgc aaccagcagt tctgccagca cgtttttaac gggctgcgga
    10081 taatcgtggt tctcaaggat ctgttgcagg gtttccgaaa cggttaccag ttcgccgcga
    10141 acggcaaaat tttcaaacag atagcgatgt aattggtcat gttgcggcat aatcatctct
    10201 cttgcaggtg acagttattc actgtcgccg tgtttaaatc gtaacaggtc gcggcgctct
    10261 tttttgtccg ggcgtcggtc cgggtgcggc atggttaagg cattaagttt acgtgccatc
    10321 gccatttttt cgcgtttctc tacactttcc gcagtctctt catacagcaa ggctgcctcg
    10381 ctggcggggc gacgctgttc agtaatcgcc tttacaatca ccgtgcgttc gtcatttccc
    10441 tggcgcagag tgagcgtggc attcagctcg acgattttgc tcggcttgct gcgctgcccg
    10501 ttgtaatgca ccttaccgcc ttcaatcatt tcacgggcca gcgcgcgggt tttataaaaa
    10561 cgggcagccc atagccattt atccagtcga acctcaacag caggtttctc tttcatggcg
    10621 tctccttcac attagcgagg ggatcaggcg gcggtagtca ttcagtgacg gatggcgttg
    10681 atactgtttc tcggcaatcc cggaatcagg attagtcacg ccgaggcagt aacgaatacc
    10741 aaattgcgcg gcagcatcga gaatcgcttc gctgtcatca ataaacagcg ttctttcagc
    10801 tttcagaccc gtagcttcgg ccaccgcatg ccataaccgc tgatcctctt tcggataacc
    10861 aaatgtgtgg gtggaaagta ataaatcaag gtgtgcgtcc agacccgtat gctcaagttt
    10921 taccgccagg ttgtgcggat gagcattggt gagcaaaatt cgctgcttac cgctggcttt
    10981 cagtgcctca agaaacggaa tggtatcttc acgcagtacg gcgcgcggtc ccatctcggt
    11041 ggtcattgca cagatatcca gacccagttg ctcactccag taatcaagac agtaccagtt
    11101 tagcgtatgc tgtacgtcgt gatattgctg gcgcatatat tccatcgctt cctgtggcgt
    11161 aaccccgttt ttcgcgcccc atgtttcagg caccagcttt tgccagaaat agttatcgaa
    11221 ggcgaggtcg agcaacgtgc cgtccatatc cagcagaacg gtatctacgt cctgccaggc
    11281 aatgttgata tgcatgaggg aaatctccag agtgaagcaa tttgcgcgac agggtagcat
    11341 aacctgccgc gcaaacgtgt tattcgataa ggctttctga aggggtgatc agttgcgggt
    11401 tcaggcagct ttcataatag gcctgaatct ccatcatgcg agtgcgatga cgctggtaac
    11461 gacgccaggc ctgtacgcca ttgtaaatgg cgctacccag catcgtcagt agcagcaatg
    11521 tggtgctgag atagcgccac aggccggaac gatccgggat cggatgaagg ccaatatgct
    11581 gcgtaccatt ggcgtcagtg aagatttttg tgacgatacc ttcggcgtta aacggcgtat
    11641 gcatcagcat ttgtgccagt ttctggaaag cgttccactg ttcttgcagc gggtagtcgt
    11701 aaagtgatgc cgaaggccag ggctgatcaa caaaatcgct gccttcgtcg ctgacaatca
    11761 ggaatccgcc gggggccgga ctgtttagtg attgtgccgc tcgcgccgtt tcatgcgtga
    11821 taaacggcgc ggtggaggtt gccaccaggt tatccagcga ttccgcactc accgggcgta
    11881 ataacacatt cacgccatcg agcttcccgg cgttggcgcg ttttaccagc gcgtcccagt
    11941 ctttactgtt gccgagattg accagcgcat ttttcagtcg cacacagtca tctttggcag
    12001 aacataaatc cgctgtcttc agtacaatgt cgccaaaatc atcaagcaat accatgccgg
    12061 atttttgaat cgctgaacgt aatgaggcac tgacgcgaga ttcatcttcc ggtttagggt
    12121 gcagctggcg attaactgct tcagtcaatg ccgtcgcttt gttgaccagt tcagattctg
    12181 gtaatggtaa tgagcgggtg tcattccaga tgatctgcga gcagtcaaac ggtaaaaaag
    12241 gtgaattggt tttcgcgctc caggttccgg aagtgcgaat attacacatt cccgtaccgc
    12301 taatacgcaa tgtatcgcct acccgcacgc cagcgtcagc cagttgtttt acgctggtgg
    12361 cttcaatggt ctgcgcgcct ttcatccatg agagagtgaa tttcagcggc atatccagcg
    12421 ggatccagaa taacagcata aacagcacca gcagcgagcc cgcagcgata atcgtactgc
    12481 gcagccagtg ctgtaacgga aagtttttta cttcatcatg cagcgaaaga tatcgcccct
    12541 gacgcactac gtggcggtcg agatagatat caatatcggt ttgttgatcg agatcctgag
    12601 caatgtatgg ctgccagtgt gcgggataga ccaggtcgat aataccgagt gaaatattgt
    12661 tgatctgttc ctgatcgttt tcgccaaaca atccccaacg acggggtgta ccgcgcagac
    12721 aatgaatttc ccgcagggag gattttgccg ggggcgcgaa tagcccccac agacctgcgc
    12781 ccagcagcag taatgcgccg cctgccagcc acggaacaaa tacatccggg gtaatcaggc
    12841 agaaaaagaa catcaggaag gaggcgacga tcagcaacgc ttcacgcagc ccgcgcggac
    12901 gactcagcgc atattcttca tgcgtttctt tgcgaatatt gagtagctcg atttgctcac
    12961 tctcttcccc gcgaatcgac gcctgcgtgg acggaacagg ttgcaaggca tagccgcgcg
    13021 tttcctgcat gtactcctgc agcgtatgac cgttgagtga aataaccaac ggcagcgaat
    13081 cggtatgaat cagttcaacg gtattctcat cgttgatgta ctgttcccag aaggggggca
    13141 ggtggacttc taccgaatcg aggtagtaac gccatttatt cggatcgtcg gtagagatgc
    13201 cgtaacgtgt gatagcgtgt gtcagcatca tgacgttgtt gctttcggca ttcagcgcca
    13261 gagagatcgg tgccgcgcta gctcccgttg ggccaggcac ctgtaatacc tgcgtcaggc
    13321 tctcaagata attttcaacg gcgctacgtt cttcaggtgt gagtttacgc gtttgcgcat
    13381 ccgcgaaggc gttggtccag ggcagctgac gccgtctgga tcgcactttt atcagccatc
    13441 ccgcaagtag tgagcaggcc agcaaagcag ctaaaaaaat cacaatggtg ctcatgcttt
    13501 ccccatctta cttagtctgt caggcgtggt cagtcgcacc agacacaata catgattctg
    13561 cggttggcta tcggcaagcg tggagtttaa cttgagcatc attaagcaca tcacagtaac
    13621 cgctgatcat agcaaaccct ctgaaggcgg aatatcagca aattcttgga gttatttcaa
    13681 cctattgact tttaatttaa tttgatttga ggacgattat ttattaagtt acataaatgt
    13741 aaataacatg caattcacat tgccgaaagc gtgtctgata tcgcacaata accgctgatt
    13801 tcacagcata gatcccacga tgagcaaatc attacaaaaa cccaccattc tgaatgttga
    13861 aactgtagcc cgttcccgac tgtttaccgt cgagagcgtg gatctggagt tcagcaatgg
    13921 cgtgcggcgt gtttatgaac gaatgcgtcc aaccaaccgg gaagcagtga tgattgtgcc
    13981 gattgtggac gatcacctga tcctgatccg cgaatacgca gtgggaactg aatcctacga
    14041 attaggtttt tcgaaaggat taattgatcc gggtgaaagc gtctacgaag ccgctaaccg
    14101 cgagctaaaa gaagaggttg gatttggtgc gaacgatctg acttttttga agaagctcag
    14161 catggcaccg tcttactttt ccagcaaaat gaatatcgtg gtcgcgcaag atctctaccc
    14221 ggaatcgctg gaaggcgatg agccagagcc gctaccacag gtgcgctggc cgctggcgca
    14281 tatgatggat ttgctggaag accctgactt caacgaagcg cgtaatgtca gcgcgctgtt
    14341 cctcgtgcgc gaatggttga aagggcaggg gcgagtgtaa atgcgtgaag tttgcctgat
    14401 gcacaacgct tatcaggctt atggggtttc tgcaatatat tgatttttca cgattttgtt
    14461 agccggataa cgcgttcacc cgcatccggc ataaacaaat gcactttgtc agccaactga
    14521 aaaggcgccg aagcgccttt ttaatcagaa caattcctgt gcctcaccat tatcgataat
    14581 ggtcgttccc acctcgtgca ccgcctgttg tgtcggctgc gtaccttcga tgaaatactc
    14641 ttcgcggctg ttgccaccat tagctaactg cccggtgctg cgatcgatat tcaccgtcac
    14701 aatacccggt ggcggcgtca gcggctgctc cggcacacct tcaagaacgg ctttcatata
    14761 agcgtcccat gcaggctggg cactcttggc tccgccttcg taacctgaga tctgatcttt
    14821 aatcgctccg gaagccgttg tatgaccgag attacgacgg tgatcatcaa agccaatcca
    14881 gaccgaggtc acaacgcccg gaccgtaacc cgagaaccac gcatctttcg aactgttagt
    14941 ggtaccggtt ttcccgccga tatcgcgacg ctgcaaatca cgacctgcac gccagccagt
    15001 accctgccag cctggctcac caaagatatt ggtgttcaaa gcactcttaa tcaggaatgc
    15061 cagcggagtg ttgatgacgt gcggtgcgta ctcctgcgcg ccagtcttcg ccactaacgc
    15121 ctgatttgcc tgctccagct gcggcattgg tacagaaaca ttctgctgct cgcgggagat
    15181 agcgacatct tcaacatcgt tattttccag cacgttcgat ttctgcgtat caccgtaaat
    15241 caccggaata tcgcattccg ggcaggctac tttcggtttc gcttcgaaaa tcacgccgcc
    15301 ctgatcgttt tcaattttgc tgataaacca cgggtccacc aggaagccgc cgttcgccat
    15361 gaccgcgtag ccgcgcgcca cctgcattgg ggtgaaggac gctgaaccca gcgccagcga
    15421 ttcggtgtgg acaatgtttt gcgccgggaa gccgaagcgt tgcagatatt ctgcagcgta
    15481 gtcgacgccc atagcccgca ttgcacgtac catcaccacg tttttcgact gacccagccc
    15541 ctgacgtaag cgaattggac cagcatattg tggcggcgag tttttcggct gccagtcaga
    15601 accggcacct gcgtcccagc gagaaattgg cacatcgttc aacatacttg ccagcgtcag
    15661 acctttatcc atcgccgcgg tgtagaggaa cggtttgatg ttggaaccca cctgacgcag
    15721 tgcctgggtg gcgcggttaa acttgctctg attgaaatca aagccaccga ccagcgccat
    15781 aacggcaccg ttttgcggat tgatcgacac cagcgccgag ttcacttccg gcacttgtgc
    15841 cagccaccat gcatcgccaa cctgacgaac ccagatttgc tgacccgttt gcagaacatc
    15901 ggtcacttta cgcggcgtcg gtccttgctg agtatccgaa cggtaaggac gcgcccagcg
    15961 aacgccttcc atactcaatg cgacggtcga cccgtccgcc agcatcgccg tcgctccctg
    16021 aggattggcg ctggtgactg cggcaggcag cagcggacca taggtcggca gcgccttcag
    16081 cgtatcggta atcttgttgt tatcccacgc cgactcgccc actttccaca gcacatttgc
    16141 cgggccgcga tagccgtggc gcatgtcgta gtccagcacg ttattacgta ccgcctgctg
    16201 tgcggcctgc tgcactttgc gggtgatggt ggtgtaaatg cgataaccgt cttcataggc
    16261 actttcgcca taacggttat acatctcctg gcgcaccatt tcgctcaggt acggcgcaga
    16321 gaaagcaatc tccggcgcgt gatagttagc gttaatcgcc tcagtgcgtg tctgatcgaa
    16381 ctgttgttgg gtgatatacc cttcatccag catccgcgac agtacgacgt tacgccgcgc
    16441 gacggcacga tccattgagt agagcggatt aaaggtggaa ggcgctttcg gcagcccggc
    16501 tatcacagcc atttcgttca gcgtcagttg gtcgaccgtt ttaccgaaat agacttgtgc
    16561 cgcagcaccg acaccatagg cgcggtaacc gaggtaaatc ttgttcagat aaagctcgag
    16621 gatctcgtct ttcgtcagca actgttcaat gcgaatcgcg aggaagactt ccttaatctt
    16681 acgcatcagc gtgcgttctg gactgaggaa gaagtttctc gccagctgct gggtaatggt
    16741 actcgcccct tgtgacgcgt ggccggagaa cagcgccaca cttgccgcac ggaagatccc
    16801 caccgggtca acgccgtgat gctcgtagaa gcgactgtct tccgtcgcga taaaggcttt
    16861 caccatctcc ggcgggattt gatccaacgt aaccggaata cgacgtttct caccgtattg
    16921 agcaatcagc tcgccatcgg cgctgtaaat ctgcatcgga atttgcaggc gaacatcttt
    16981 taatgtcgcc acatccggca gttgtggctc gatgtagcgg tataggccat aaatcgagcc
    17041 tgctcccagc agaatgcaac agactgcaag gatcaaaaaa tactttacga acttcactgg
    17101 aaatttccca tttagtttca tttgggcagt ttataaacaa acgcgcggta gtataaaggc
    17161 aagccagacg cattgatata cccgtcagag tgacgggtga taaggagatc atcacaatgg
    17221 catttaagat ctggcaaatt ggtttgcatt tacaacagca agaagcggta gcggttgcga
    17281 tcgtgcgggg cgcaaaagaa tgctttttgc aacgctggtg gcggttgccg ctggagaacg
    17341 acattatcaa agatgggcgg attgttgatg cgcagcagct ggctaaaacg ttgttacctt
    17401 ggagtcgcga actgccgcag cgtcatcaca ttatgttggc gtttcccgcc agtcgcacat
    17461 tacagcggtc atttccgcgc ccgtcgatgt cccttggtga gcgggagcaa acggcctggc
    17521 tgtcagggac gatggcccgc gagctggata tggatccgga ctccctgcgc ttcgattaca
    17581 gcgaagactc actcagtccc gcctataacg tgactgccgc gcaaagcaaa gagctggcaa
    17641 cgctgcttac tctggcagaa aggttgcgtg ttcatgttag tgcgatcacc ccggatgcca
    17701 gtgcattaca gcgattcctg ccttttttac cttctcatca gcaatgtctg gcctggcgtg
    17761 ataacgaaca gtggctgtgg gcgacgcgct atagctgggg gcgcaaactg gcggtgggga
    17821 tgactagcgc gaaggagctg gcggcagcgt tattcgttga tcccgacagc gtcgcgatat
    17881 gtggcgaagg cggatttgac ccctgggagg ccgtttctgt tcgtcagccg ctgctaccgc
    17941 cgcctggtgg agactttgcc atcgcgctgg ggctggcgct tgggaaggcg tactgatgaa
    18001 cccgccaatt aattttttgc cctggcgaca gcaacgccgg accgcttttc tgcgtttctg
    18061 gttgctgatg ttcgttgcgc ctctgctgct ggccgtcggg ataacgctaa tactgcgtct
    18121 gacaggcagc gccgaagcgc gcatagacgc agttttgctt caggcggaac aacaactcgc
    18181 ccgcagctta cagataacga agccacgttt gctggagcaa cagcagttac gcgaacagcg
    18241 ttcgcaacgg cagcgccagc gacaatttac ccgcgactgg caatctgcgc tggaagcact
    18301 ggcggcgctt ttacccgagc acgcctggct gacaacgata agctggcagc agggaacgct
    18361 ggagatcaag gggctgacaa caagcattac cgcgttaaac gcactagaaa cgtcactccg
    18421 ccaggatgcg tcttttcatc tcaatcagcg gggagccacg cagcaggatg cgcagggacg
    18481 ctggcaattt gagtatcagt taacaaggaa ggttagcgat gaacatgttc tttgactggt
    18541 ggttcgccac atcaccccgc ctccgccagt tttgctgggc attctggttg ctgatgttag
    18601 ttacgctcat ttttctgtca tcgacacacc atgaagagcg cgacgcatta attcgattac
    18661 gggcaagtca tcaccagcag tgggccacac tgtatcgcct ggttgacacc actcccttca
    18721 gtgaagaaaa aacgctgccc ttttcgccac tggattttca gttgcccggc gcgcaactgg
    18781 tttcctggca tccatccgcg cagggaggtg agttggcgtt gaaaacgctg tgggaagcag
    18841 tgccgtcggc attcacacgg ctggcagagc gcaacgtcag cgtgagccgt ttttcgttaa
    18901 gcgtggaagg tgatgatctt ttgttcacgc tacaactgga gacgccgcat gagggttaaa
    18961 cgctggttgt tggcaggtat tgcattgtgc cttttaaccg gtatgcgtga cccttttaaa
    19021 ccgccggaag atctatgccg gattagcgaa cttagccagt ggcgctatca ggggatggta
    19081 gggcgaggcg agcgcatcat cggtgtaata aaagacgggc aaaagaaatg gcgacgggtg
    19141 cagcaaaacg atgtgctgga aaacggctgg acaattttac agctgacgcc agacgtacta
    19201 acgctgggta ccgggacaaa ctgcgaaccg ccacaatggt tgtggcaacg gcaaggagat
    19261 acaaatgaag caatggatag ccgcactact gttgatgctg atacccggcg tacaggcggc
    19321 aaagccgcaa aaagtgacgc tgatggtgga tgacgttccg gtagctcagg tgttgcaggc
    19381 gctggctgaa caggagaagt tgaacctggt cgtgtcgcca gacgtcagcg gtacggtgtc
    19441 gttacatcta acagatgttc cctggaagca ggcactacaa actgtagtga aaagcgccgg
    19501 actgataacg cggcaggaag gcaacattct ctcagtgcat tccattgcct ggcagaataa
    19561 caatatcgcc cgccaggagg cggagcaggc gcgggcgcag gcaaatctgc cgctggaaaa
    19621 tcgcagtata accctgcaat acgccgacgc gggagaactg gcgaaagcgg gggagaagct
    19681 actgagtgcc aaagggagta tgatcgtcga taaacgcacc aatcgccttt tgctacgaga
    19741 taacaaaacg gcgttaagcg cgcttgaaca gtgggtagcg caaatggatc tgccggtcgg
    19801 gcaggttgag ctgtcggcgc atattgtcac cattaatgaa aaaagtttgc gtgagttagg
    19861 cgtgaaatgg acgctggccg atgcgcaaca cgctggtggc gttgggcaag tcaccacgct
    19921 tggtagcgac ctctccgtag cgacggcgac aacgcatgtc ggttttaaca ttgggcgcat
    19981 caacggacgc ttgctggatc ttgagctttc cgcgctcgaa caaaaacagc agctggatat
    20041 tatcgccagt ccgcgtctgc tggcctcaca tcttcagcct gccagcatta aacaggggag
    20101 cgaaattcca tatcaggttt ccagcgggga aagtggcgcg acgtcggtgg aatttaaaga
    20161 ggccgtcctg gggatggagg tcacgcccac ggtgttacaa aaaggtcgca tccggctgaa
    20221 attacacatc agccagaacg ttccggggca ggtgctacag caggccgatg gcgaagtgct
    20281 ggcgattgat aagcaggaga tcgaaacgca ggttgaggtc aaaagcggag aaacgttggc
    20341 gctgggcggc atttttaccc gtaaaaataa atcgggtcag gatagcgtac cgttgcttgg
    20401 cgacattccc tggttcgggc aattatttcg tcatgacgga aaagaatatg aacgacgcga
    20461 gttagtggtg tttatcacgc cacgactggt ttccagtgag taaacagccg taaaagcggt
    20521 aatgttttta tgctgaacgt gtttcatcta tttgacgcgc gcaggtattt agcatacaag
    20581 gagtaccgat ttgagagttg gtgctcttcg ctgcctgcgt tccatgatga tgatttatca
    20641 ttcaggcggc attttgctgt cttttttacg ctaatcttac ccggtgattt atcgccagag
    20701 cggtggtagc aaggcagcgc gcttgcagcg accagatatg cagagggatg ggtgatttat
    20761 tcagttgcca aacccgctgg agtattgaga taattttcag tctgactctc gcaatatctt
    20821 atgaggtttc agttcatgtc ctgcggcgct ctctgagcga agcgggttta tcattaacga
    20881 atagtcttag tagtaccgaa aaaatggcag agaaacgcaa tatctttctg gttgggccta
    20941 tgggtgccgg aaaaagcact attgggcgcc agttagctca acaactcaat atggaatttt
    21001 acgattccga tcaagagatt gagaaacgaa ccggagctga tgtgggctgg gttttcgatt
    21061 tagaaggtga agaaggcttc cgcgatcgcg aagaaaaggt catcaatgag ttgaccgaga
    21121 aacagggtat tgtgctggct actggcggcg gctctgtgaa atcccgtgaa acgcgtaacc
    21181 gtctttccgc tcgtggcgtt gtcgtttatc ttgaaacgac catcgaaaag caacttgcac
    21241 gcacgcagcg tgataaaaaa cgcccgttgc tgcacgttga aacaccgccg cgtgaagttc
    21301 tggaagcgtt ggccaatgaa cgcaatccgc tgtatgaaga gattgccgac gtgaccattc
    21361 gtactgatga tcaaagcgct aaagtggttg caaaccagat tattcacatg ctggaaagca
    21421 actaattctg gctttatata cactcgtctg cgggtacagt aattaaggtg gatgtcgcgt
    21481 tatggagagg attgtcgtta ctctcgggga acgtagttac ccaattacca tcgcatctgg
    21541 tttgtttaat gaaccagctt cattcttacc gctgaaatcg ggcgagcagg tcatgttggt
    21601 caccaacgaa accctggctc ctctgtatct cgataaggtt cgcggcgtac ttgaacaggc
    21661 gggtgttaac gtcgatagcg ttatcctccc tgacggcgag cagtataaaa gcctggctgt
    21721 actcgatacc gtctttacgg cgttgttaca aaagccgcat ggtcgcgata ctacgctggt
    21781 ggcgcttggc ggcggcgtag tgggcgatct gaccggcttc gcggcggcga gttatcagcg
    21841 cggtgttcgt ttcattcaag tcccgacgac gttactgtcg caggtcgatt cctccgttgg
    21901 cggcaaaact gcggccaacc atcccctcgg taaaaacatg attggcgcgt tctaccagcc
    21961 tgcttcagtg gtggtggatc tcgactgtct gaaaacgctt cccccgcgtg agttagtgtc
    22021 ggggctggca gaagtcatca aatacggcat tattcttgac ggtgcgtttt ttaactggct
    22081 ggaagagaat ctggatgcgt tgttgcgtct ggacggtccg gcaatggcgt actgtattcg
    22141 ccgttgttgt gaactgaagg cagaagttgt cgccgccgac gagcgcgaaa ccgggttacg
    22201 tgctttactg aatctgggac acacctttgg tcatgccatt gaagctgaaa tggggtatgg
    22261 caattggtta catggtgaag cggtcgctgc gggtatggtg atggcggcgc ggacgtcgga
    22321 acgtctcggg cagtttagtt ctgccgaaac gcagcgtatt ataaccctgc tcaagcgggc
    22381 tgggttaccg gtcaatgggc cgcgcgaaat gtccgcgcag gcgtatttac cgcatatgct
    22441 gcgtgacaag aaagtccttg cgggagagat acgcttaatt cttccgttgg caattggtaa
    22501 gagtgaagtt cgcagcggcg tttcgcacga gcttgttctt aacgccattg ccgattgtca
    22561 atcagcgtaa caacaagaaa ggtcaggccg cttatcaagc ggtctattag cttcaggtta
    22621 attgcaacgt ggtaagcatt aaccttttag tggggtgtta aatggatgaa ttcaaaccag
    22681 aagacgagct gaaacccgat cccagcgatc gtcgtactgg tcgttctcgt caatcttctg
    22741 aacgttctga gcgtactgaa cgtggcgaac cgcagatcaa ttttgatgat attgaacttg
    22801 atgacactga cgatcgccgt ccgactcgtg cgcaaaaaga gcgcaatgag gaaccggaaa
    22861 tcgaagaaga aattgacgaa tccgaagatg aaaccgtgga tgaagagcgc gtagagcgtc
    22921 gtccgcgtaa gtgcaaaaaa gcagccagta aacccgcttc tcgtcagtat atgatgatgg
    22981 gcgtcggcat tctggttcta ctgctgttga tcatcggtat cggttctgcg ctaaaagccc
    23041 cctcgacctc ttccagcgat caaaccgcgt ctggcgagaa gagtattgat cttgcaggca
    23101 atgcgaccga tcaggcgaat ggggtgcagc cagcgccggg aaccacgtct gcggaaaata
    23161 ctcagcagga tgtttctctg ccaccgatct cttctacgcc gactcaaggg caaaccccgg
    23221 cggcaacgga tggtcaacaa cgtgttgaag tgcagggtga cctgaacaat gcgctgactc
    23281 agccacaaaa tcagcaacag ttgaacaatg tggcggtcaa ttccacattg ccgaccgaac
    23341 cagcgactgt cgcgcctgtt cgcaatggca atgcatcgcg tgacacggcg aaaacgcaaa
    23401 ccgctgaacg tccgtccact acgcgcctag ctcgtcagca ggcggtgatt gaaccgaaaa
    23461 aaccgcaagc aaccgtgaaa acggagccga agccggtagc acagacgccg aagcgtactg
    23521 aaccagctgc ccctgtggcg agcacgaagg caccggctgc gacttctacg ccagcaccaa
    23581 aagagacggc gactacggct ccagtacaga cggcatcccc ggcgcaaacc acggcaacac
    23641 cagccgctgg agggaagacc gcaggtaatg ttggttcgtt gaaatcggca ccgtccagcc
    23701 attacactct gcagctgagc agttcctcta actacgacaa cctgaacggt tgggcgaaga
    23761 aagagaatct gaaaaactac gttgtctatg aaacgacgcg taatggtcag ccgtggtatg
    23821 tcctggtttc tggcgtgtac gcttcgaaag aagaggcgaa aaaagcggta tctacattgc
    23881 cagcagatgt tcaggccaaa aacccgtggg cgaaaccgct gcgtcaggta caggccgatc
    23941 tgaagtaatc aaggttatct cccgcaatgg tttatcgttg cgggagctgc ctgaagcgct
    24001 ggatgctgtc ggagctttct ccacagccgg agaaggtgta attagttagt cagcatgaag
    24061 aaaaatcgcg cttttttgaa gtgggcaggg ggcaagtatc ccctgcttga tgatattaaa
    24121 cggcatttgc ccaagggcga atgtctggtt gagccttttg taggtgccgg gtcggtgttt
    24181 ctcaacaccg acttttctcg ttatatcctt gccgatatca atagcgacct gatcagtctc
    24241 tataacattg tgaagatgcg tactgatgag tacgtacagg ccgcacgcga gctgtttgtt
    24301 cccgaaacaa attgcgccga ggtttactat cagttccgcg aagagttcaa caaaagccag
    24361 gatccgttcc gtcgggcggt actgttttta tatttgaacc gctacggtta caacggcctg
    24421 tgtcgttaca atctgcgcgg tgagtttaac gtgccgtttg gccgctacaa aaaaccctat
    24481 ttcccggaag cagagttgta tcacttcgct gaaaaagcgc agaatgcctt tttctattgt
    24541 gagtcttacg ccgatagcat ggcgcgcgca gatgatgcat ccgtcgtcta ttgcgatccg
    24601 ccttatgcac cgctgtctgc gaccgccaac tttacggcgt atcacacaaa cagttttacg
    24661 cttgaacaac aagcgcatct ggcggagatc gccgaaggtc tggttgagcg ccatattcca
    24721 gtgctgatct ccaatcacga tacgatgtta acgcgtgagt ggtatcagcg cgcaaaattg
    24781 catgtcgtca aagttcgacg cagtataagc agcaacggcg gcacacgtaa aaaggtggac
    24841 gaactgctgg ctttgtacaa accaggagtc gtttcacccg cgaaaaaata attctcaagg
    24901 agaagcggat gaaacagtat ttgattgccc cctcaattct gtcggctgat tttgcccgcc
    24961 tgggtgaaga taccgcaaaa gccctggcag ctggcgctga tgtcgtgcat tttgacgtca
    25021 tggataacca ctatgttccc aatctgacga ttgggccaat ggtgctgaaa tccttgcgta
    25081 actatggcat taccgcccct atcgatgtac atctgatggt gaaacccgtc gatcgcattg
    25141 tgcctgattt cgctgccgct ggtgccagca tcattacctt tcatccagaa gcctccgagc
    25201 atgttgaccg cacgctgcaa ctgattaaag aaaatggctg taaagcgggt ctggtattta
    25261 acccggcgac acctctgagc tatctggatt acgtgatgga taagctggat gtgatcctgc
    25321 tgatgtctgt taacccaggt tttggcggtc agtcgttcat tccacaaaca ctggataaac
    25381 tgcgcgaagt acgtcgtcgt atcgacgagt ctggttttga cattcgactg gaagtggacg
    25441 gtggcgtgaa ggtgaacaac attggcgaaa tcgctgcggc gggcgcggat atgttcgtcg
    25501 ccggttcggc aatcttcgac cagccagact acaaaaaagt cattgatgaa atgcgcagtg
    25561 aactggcaaa ggtaagtcat gaataagttt gaagatattc gcggcgtcgc ttttgatctc
    25621 gacggtacgc tggttgacag tgctcccggt cttgctgctg cggtagatat ggcgctgtat
    25681 gcgctggagt tacccgtcgc aggtgaagaa cgcgttatta cctggattgg taacggcgca
    25741 gatgttctga tggagcgtgc attggcctgg gcgcgtcagg aacgtgcgac tctgcgtaaa
    25801 acaatgggta aaccgcccgt tgatgacgac attccggcag aagaacaggt acgtattctg
    25861 cgtaaactgt tcgatcgcta ctatagcgag gttgccgaag aggggacgtt tttgttcccg
    25921 cacgttgccg atacgttggg cgcgttgcag gctaaaggcc tgccgctagg cctggtcacc
    25981 aacaaaccga cgccgttcgt cgcgccactg ctcgaagcct tagatattgc caaatacttt
    26041 agcgtggtta tcggcggcga tgatgtgcaa aacaaaaaac cgcatccgga cccgctgtta
    26101 ctggtggctg agcggatggg aattgcccca caacagatgc tgtttgtcgg cgactcacgc
    26161 aatgatattc aggcggcaaa agcggcaggt tgcccatcag ttggcttaac ctacggatat
    26221 aactacggcg aggctatcga tctcagccag cctgatgtaa tttatcagtc tataaatgac
    26281 cttctgcccg cattagggct tccgcatagc gaaaatcagg aatcgaaaaa tgactaagcc
    26341 catcgttttt agtggcgcac agccctcagg tgaattgacc attggtaact acatgggtgc
    26401 gctgcgtcag tgggtaaaca tgcaggatga ctaccattgc atttactgta tcgttgacca
    26461 acacgcgatc accgtgcgcc aggatgcaca gaagctgcgt aaagcgacgc tggatacgct
    26521 ggccttgtat ctggcttgtg gtatcgatcc tgagaaaagc accatttttg ttcagtccca
    26581 cgtaccagaa catgcgcagt taggctgggc actgaactgc tatacctact tcggcgaact
    26641 gagccgcatg acccagttta aagataaatc tgcgcgttat gccgagaaca tcaacgctgg
    26701 tctgtttgac tatccggtgc tgatggctgc ggacatcctg ctgtatcaaa ctaatctggt
    26761 accggtgggt gaagaccaga aacagcacct ggaactgagt cgcgatatcg cccagcgttt
    26821 caacgcgctg tatggcgaga tctttaaggt gccggagccg tttattccga aatctggcgc
    26881 gcgcgtaatg tcgctgctgg agccgaccaa gaagatgtcc aagtctgacg ataaccgcaa
    26941 taacgttatc ggcctgctgg aagatccgaa atcggtagtg aagaaaatca aacgcgcggt
    27001 cactgactcc gacgagccgc cggtagttca ctacgatgtg cagaacaaag cgggcgtttc
    27061 caacctgctg gatatccttt ctgcggtaac gggccagagc atcccagaac tggaaaaaca
    27121 gttcgaaggc aagatgtatg gtcatctgaa aggtgaagtg gctgatgccg tttccggtat
    27181 gctgactgaa ttgcaggaac gctatcaccg tttccgcaac gatgaagcct tcctgcaaca
    27241 ggtgatgaaa gacggcgcag aaaaagccag tgtacacgct tcccgtacgc tgaaagcggt
    27301 gtacgaagcg attggttttg tggcgaagcc gtaatatcaa aacgctcgga cggtcccctc
    27361 gcccctttgg ggagagggtt agggtgaggg gagcaggcaa gcgccagtgg gaattaccct
    27421 ttgctcgcat tgtcgaataa atcacttcgt catcactctg aaaccgggga aacccggttt
    27481 ttttatcctc atttgcaata atccgaaaaa atgtgaagcg cctcgccgtt tccacatctc
    27541 acagttgcca cttatcttca ttttaatgaa gatataaaca ttcattttat tgaaaatata
    27601 ttatgcgtcg aacgtttatc aaaaaagaag gcgtcgtcat cacgacgctg gcccgttatt
    27661 tgttggggga aaaatgcggt aatcgactga aaaccataga tgagctggca actgaatgcc
    27721 gttcatcggt tggcctgacg caggccgtgt tgaaaacgtt ggaatcaagt ggagcgatac
    27781 ggattgaacg ccgtgggcgc aatggcagtt atctggtcga aatggataat aaagcgctgc
    27841 tgagtcatgt ggatatcaat aacgttgtgt gtgccatgcc tttgccctat acccgcttgt
    27901 acgaaggttt agcaagcggg ctgaaagccc agtttgatgg cattcctttt tattatgcgc
    27961 atatgcgtgg cgcggatatt cgtgtggagt gtttgcttaa cggtgtctat gacatggcag
    28021 tagtttcccg cctggcggcg gaaagttatc tcagccaaaa caatttgtgc atcgccctcg
    28081 agcttggccc gcatacgtat gttggtgaac atcaactgat atgccgcaaa ggtgagtctg
    28141 gaaatgttaa gcgagtaggt ctcgatagtc gttcggcgga tcagaaaatc atgaccgatg
    28201 tcttttttgg cgatagtgat gtggaacgtg tcgatctctc ttatcacgag agtttacaac
    28261 gcattgttaa aggcgatgtc gatgcggtta tctggaacgt ggtggcggaa aacgaactga
    28321 ccatgctggg attagaggcg acgccgctca cagacgatcc gcgattttta caggccaccg
    28381 aagccgtggt cctgacgcga gtcgatgatt acccaatgca acaactgctg cgtgccgttg
    28441 tagataaaca cgccctgctc gcccatcaac aacgggtagt gagtggggaa caggaaccga
    28501 gttattaaac gaaaggcatc tgatatggaa accagactca acctgctttg cgaggcaggc
    28561 gttattgata aggacatctg caaaggcatg atgcaggtcg tcaacgtact ggaaacagag
    28621 tgccatctgc cggtgcgcag tgagcaagga acgatggcga tgacacatat ggcgagtgca
    28681 ctgatgcgca gtcgccgtgg tgaagaaata gagccgctgg ataacgaatt gctggcagag
    28741 ctggcgcaat ccagccactg gcaagccgtt gtgcaattgc atcaggtgtt gttgaaggaa
    28801 ttcgcactgg aagttaatcc gtgtgaagaa ggctatttgc tggccaacct ttatggatta
    28861 tggatggctg ctaacgaaga ggtttgaagc tcccgacaaa tccacgtcgc acaacctaaa
    28921 tattcaaaaa aatgaatatt taattcaagg aacagaaacg aggcaacaag atgtttgtag
    28981 aagcattgaa acgccagaac ccggcgctga tttccgccgc actaagtttg tggcagcagg
    29041 gcaagatcgc cccggacagc tgggtgatcg acgtggatca ggtactggaa aacggtaagc
    29101 gactgattga gacggcgcgg ctttacggca ttgaactgta tctgatgacc aagcagtttg
    29161 gccgtaaccc atggctggcg gaaaaattgc tggcattagg ttacagcggc attgtggcgg
    29221 tggattacaa agaggcgcga gtcatgcgcc gcgctggttt gtcggtggcg catcaggggc
    29281 atctggtaca aatcccttgt catcaggttg ctgacgccgt tgaacagggc accgacgtca
    29341 tcaccgtgtt tactctcgac aaagcgcggg aagtttctgc ggcagcggtg aaggccggac
    29401 gtgtgcagtt tgtgctgctc aaagtttata gcgacgatga ttttctttat ccggggcagg
    29461 agagcggttt tgtacagcat tcgctgcacg aggtggttgc tgaaattaag aaactgccgg
    29521 gtctgcattt agccggactt acccatttcc cttgcctgct ttgggatgag gctgccggaa
    29581 aagttttgcc gacaccgaat cttcacacgc tgatacaggc acgggatcaa ctggcgaaat
    29641 ctggtattgc acttgagcaa ctgaacgcgc cttcagcgac cagctgcact tcgctgccat
    29701 tactggcgca atacggtgtg actcatgccg aacccggtca tgcgctgacg ggcactattc
    29761 cggcaaacca gcagggcgat cagtctgaac gtatcgcgat gctctggttg agtgaaatct
    29821 cccatcattt ccgtggcgac agctactgct acggcggcgg ttactaccgt cgtggtcatg
    29881 cgcaacatgc gttggtgttt acgccagaaa atcaaaagat tactgaaacc aatctcaaaa
    29941 ctgtggatga cagcagtatc gactacaccc tgtcgctggc aggcgagttt ccggtaagca
    30001 gtgcagtggt gctctgtttc cgcacgcaga tttttgtcac ccgtagcgat gtggtgctgg
    30061 tgtccggtat tcaccgtggc gaaccgaaaa tcgttggtcg ttatgacagt cttggaaact
    30121 ctctgggggc gtaatggcgc gatttgtggt gttagtgatt gatagctttg gcgtaggggc
    30181 aatgaaagat gtcacgctgg tgcgtccgca agatgcggga gcgaatacat gtggtcacat
    30241 cctgagccag ttgccgcatt tgcagctacc aacgctggag aagctggggc taatcaacgc
    30301 attgggttat gcgccaggcg atatgcagcc gtcagattcc gcaacctggg gcgtggcaga
    30361 gctgcaacat gaaggtggcg atacctttat ggggcatcag gaaattttag gcacgcgccc
    30421 gttaccgccg ctgcggatgc ctttttgcga tgtgattgac cgtgttgagc aggcattagt
    30481 atccgccggt tggcaggtgg agcgccgtgg cgatgaactg caatttctgt gggtcaatca
    30541 ggcggttgcg attggcgata atctcgaggc ggatttaggc caagtctata acattaccgc
    30601 caatctctct gtgatctctt ttgacgacgc aatcaaaatt ggtcgtatcg tgcgtgagca
    30661 ggtacaggtc ggtcgggtca ttacatttgg tggcctgtta accgacagtc aacgcattct
    30721 cgatgccgca gaaagcaaag aagagcgctt tattggtatc aatgcgccgc gttctggcgc
    30781 ttatgacaac ggcttccagg tcgtgcatat gggctacggt gtcgataaaa aagtgcaggt
    30841 gccgcaaaaa ctgtatgagg cgggcgtgcc aaccgtgctg gtgggtaagg tggcagatat
    30901 cgtcagcaat ccttatggcg tgagctggca aaacctggtg gatagccagc ggattatgga
    30961 tatcaccctc gacgaattta acacccatcc gacggcgttt atttgcacca atatccagga
    31021 aaccgacctc gctggtcatg cagaagacgt cgcacgttat gccgaacgtt tgcaggtcgt
    31081 tgaccgtaac cttgcccggc ttgttgatgc gatgcagcca gatgattgcc tggtcgtgat
    31141 ggcggatcac ggcaacgatc cgaccattgg tcacagccac catacccgcg aagtggtgcc
    31201 gctgctggtt tatcagcaag gcctggctgc tacgcagctc ggtgtgcgca ccacgctttc
    31261 tgatgtggga gctaccgtgt gtgaattttt ccgtgcgcca ccgccacaaa atggtcgctc
    31321 ttttctttcc tccctccggt ttgcaggaga caccctatga gttttgatcc gacgggttac
    31381 accctggccc atgagcatct gcatattgat ctctccggct ttaaaaacaa cgtggactgc
    31441 cgccttgatc agtatgcgtt catttgccag gagatgaacg acctgatgac ccggggtgta
    31501 cgtaatgtga ttgagatgac caaccgttac atggggcgca atgcgcaatt tatgctcggt
    31561 gtaatgcgcg aaaccgggat caacgtggtg gcctgtactg gttattacca ggatgcgttt
    31621 ttcccggaac atgtggtgac ccgcagcgtg caggaactgg cgcaggagat ggtcgatgaa
    31681 attgaacagg gtatcgatgg cacggagctg aaagccgggc tcatcgcgga gatcggctcc
    31741 agcgaaggaa agattacgcc gctggaagag aagatattta ttgccgctgc gctggcgcat
    31801 aaccagaccg gacgcccgat ctccacgcat acgtcgttca gcaccatggg gctggaacaa
    31861 ctggctctgt tgcaagccca cggagttgat ctttcgcgcg tcaccgttgg tcactgcgat
    31921 ctgaaagaca acctcgacaa cattttgaag atgatcgatc tcggcgcgta cgtgcagttc
    31981 gacaccattg gtaagaacag ttactacccg gacgaaaagc gcattgcgat gctccacgcg
    32041 ctacgtgacc gtgggttgct gaaccgcgtc atgctgtcga tggatattac gcgccgctcc
    32101 catttaaaag ccaatggtgg ttatggctat gactatttat tgaccacctt tattccgcaa
    32161 ttgcgccagt caggattcag tcaggccgat gtggatgtga tgttacgtga aactccctat
    32221 caatttttcc aataaggaca gactcatgaa aaagattggc gttgcaggct tacagcgtga
    32281 gcagattaaa aaaaccattg aagcgacggc tcctggcagt tttgaagttt tcattcacaa
    32341 cgacatggaa gcggcaatga aagtgaaatc cgggcaactg gattactaca tcggtgcgtg
    32401 taataccggt gcgggcgcgg cattgtcgat tgccatcgcg gtgattggct ataacaaaag
    32461 ttgcaccatt gccaaaccag gcattaaagc gaaagacgag catatcgcca aaatgatcgc
    32521 tgaaggtaaa gtggcgtttg gcctttccgt tgagcacgtc gaacacgcga ttccgatgct
    32581 gattaaccat ctgaaataaa aggcacgact atggatctgt atattcagat tatcgtggtg
    32641 gcgtgcctga cgggtatgac atcgcttctg gcgcatcgct cggcggctgt ttttcatgac
    32701 ggcatccgcc cgatcctgcc gcaactgatt gaaggctata tgaaccgtcg cgaggcgggg
    32761 agtatcgctt ttggtctgag cattggtttt gtggcctcgg tggggatttc ttttaccctg
    32821 aaaaccgggc tgctc
//
LOCUS       DADMHC010000024        32625 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.024, whole genome shotgun sequence.
ACCESSION   DADMHC010000024 DADMHC010000000
VERSION     DADMHC010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 32625)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32625)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32625
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.024"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..268)
                     /locus_tag="JNZ57_000905"
     CDS             complement(<1..268)
                     /locus_tag="JNZ57_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827212.1"
                     /translation="METQWTRMTADEAAEIIQHNDMVAFSGFTPAGSPKALPTAIARR
                     ANEQHEAKKPYQIRLLTGASISAAADDVLSDADAVSWRAPYQTSS"
     gene            complement(292..1077)
                     /gene="scpB"
                     /locus_tag="JNZ57_000906"
     CDS             complement(292..1077)
                     /gene="scpB"
                     /locus_tag="JNZ57_000906"
                     /EC_number="7.2.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311816.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA decarboxylase"
                     /protein_id="HAY8827213.1"
                     /translation="MSYQYVNVATINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLN
                     RPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISM
                     VEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKEL
                     IFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELRVLGE
                     AHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRKPNFVGH"
     gene            complement(1088..2083)
                     /gene="meaB"
                     /locus_tag="JNZ57_000907"
     CDS             complement(1088..2083)
                     /gene="meaB"
                     /locus_tag="JNZ57_000907"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HAY8827214.1"
                     /translation="MINEATLAESIRRLRQGERATLAQAMTLVESRHPRHQALSTQLL
                     DAIMPYCGNTLRLGVTGTPSAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSIL
                     GDKIRMNDLARAEAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQS
                     ETEVARMVDCFISLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIARHMYE
                     SALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIEFKTALTASGRLQQVRQQQSVE
                     WLRKQTEEEVLNHLFANEDFDRYYRQTLLAVKNNTLSPRTGLRQLSEFIQTQYFD"
     gene            complement(2076..4219)
                     /gene="scpA"
                     /locus_tag="JNZ57_000908"
                     /pseudo
     CDS             complement(2076..4219)
                     /gene="scpA"
                     /locus_tag="JNZ57_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417392.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase"
     gene            complement(4423..5316)
                     /locus_tag="JNZ57_000909"
     CDS             complement(4423..5316)
                     /locus_tag="JNZ57_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator ArgP"
                     /protein_id="HAY8827215.1"
                     /translation="MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLEN
                     MFGQPLLVRTVPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSL
                     ATWLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLG
                     ALDYLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPC
                     HIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPES
                     RMMRKVTDALLDYGHKVLRQD"
     gene            5699..6358
                     /gene="rpiA"
                     /locus_tag="JNZ57_000910"
     CDS             5699..6358
                     /gene="rpiA"
                     /locus_tag="JNZ57_000910"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HAY8827216.1"
                     /translation="MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKG
                     QIEGAVSSSDASTEKLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTR
                     EKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYRQGV
                     VTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIV
                     K"
     gene            6613..7845
                     /locus_tag="JNZ57_000911"
     CDS             6613..7845
                     /locus_tag="JNZ57_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-3-phosphoglycerate dehydrogenase"
                     /protein_id="HAY8827217.1"
                     /translation="MAKVSLEKDKIKFLLVEGVHQKALESLRAAGYTNIEFHKGALDD
                     EQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPVF
                     NAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVWNKLAAGSFEARGKKLGIIGYG
                     HIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTK
                     NMMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDP
                     FTSPLCEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNFPEVSLPL
                     HGGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADEDVAEK
                     ALQAMKAIPGTIRARLLY"
     gene            8074..8133
                     /gene="ibsC"
                     /locus_tag="JNZ57_000912"
     CDS             8074..8133
                     /gene="ibsC"
                     /locus_tag="JNZ57_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin IbsC"
                     /protein_id="HAY8827218.1"
                     /translation="MMRLVIILIVLLLISFGAY"
     gene            8466..8525
                     /locus_tag="JNZ57_000913"
     CDS             8466..8525
                     /locus_tag="JNZ57_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HAY8827219.1"
                     /translation="MMRLAIILIVLLLISFPAY"
     gene            complement(8626..9228)
                     /locus_tag="JNZ57_000914"
     CDS             complement(8626..9228)
                     /locus_tag="JNZ57_000914"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HAY8827220.1"
                     /translation="MTQLPELPLTLSRQEIRKMIRQRRRALTPEQQLEMGQQAATRMM
                     TYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVCLPVLHPFSAGNLLFLNYHPQ
                     SELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQ
                     HYKTQPVGYAHDCQLVEKLPVEEWDIPLPAVVTPSKVWEW"
     gene            complement(9249..9432)
                     /gene="ssrS"
                     /locus_tag="JNZ57_000915"
     ncRNA           complement(9249..9432)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="JNZ57_000915"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(9474..9803)
                     /gene="zapA"
                     /locus_tag="JNZ57_000916"
     CDS             complement(9474..9803)
                     /gene="zapA"
                     /locus_tag="JNZ57_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HAY8827221.1"
                     /translation="MSAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKER
                     TRVTNTEQLVFIAALNISYELAQEKAKTRDYAASMEQRIRMLQQTIEQALLEQGRITE
                     KTNQNFE"
     gene            9971..10549
                     /gene="ygfB"
                     /locus_tag="JNZ57_000917"
     CDS             9971..10549
                     /gene="ygfB"
                     /locus_tag="JNZ57_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708672.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein YgfB"
                     /protein_id="HAY8827222.1"
                     /translation="MSIQNEMPGYNEMNQYLNQQGTGLTPAEMHGLISGMICGGNDDS
                     SWLPLLHDLTNEGMAFGHELAQALRKMHSATSDALQDDGFLFQLYLPDGDDVSVFDRA
                     DALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDEDEDQEELEMSLEE
                     IIEYVRVAALLCHDTFTHPQPTAPEVQKPTLH"
     gene            10575..11900
                     /gene="pepP"
                     /locus_tag="JNZ57_000918"
     CDS             10575..11900
                     /gene="pepP"
                     /locus_tag="JNZ57_000918"
                     /EC_number="3.4.11.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro aminopeptidase"
                     /protein_id="HAY8827223.1"
                     /translation="MSEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPY
                     RQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEK
                     LGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADEIMNSALEKLRKGSRQNLTAP
                     ATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHH
                     EFNRHGARYPSYNTIVGSGENGCILHYTENESELRDGDLVLIDAGCEYKGYAGDITRT
                     FPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKG
                     DVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPD
                     AEVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEEIEALMAAARKQ"
     gene            11897..13075
                     /gene="ubiH"
                     /locus_tag="JNZ57_000919"
                     /gene_synonym="visB"
     CDS             11897..13075
                     /gene="ubiH"
                     /locus_tag="JNZ57_000919"
                     /gene_synonym="visB"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-6-methoxyphenyl hydroxylase"
                     /protein_id="HAY8827224.1"
                     /translation="MSVIIVGGGMAGATLALAISRLSHGALPVHLIEATAPESHAHPG
                     FDGRAIALAAGTCQQLARIGVWQSLADCATAITTVHVSDRGHAGFVTLAAEDYQLAAL
                     GQVVELHNVGQRLFALLRKAPGVTLHCPDRVANVARTQSHVEVTLESGETLTGRVLVA
                     ADGTHSALATACGVDWQQEPYEQLAVIANVATSVAHEGRAFERFTQHGPLAMLPMSDG
                     RCSLVWCHPLERREEVLSWSDEKFCRELQSAFGWRLGKITHAGKRSAYPLALTRAARA
                     ITHRTVLVGNAAQTLHPIAGQGFNLGMRDVMSLAETLTQAHERGEDIGDYGILCRYQQ
                     RRQSDREATIGVTDSLVHLFANRWAPLVVGRNIGLMTMELFTPARDVLAQRTLGWVAR
                     "
     gene            13098..14300
                     /gene="ubiI"
                     /locus_tag="JNZ57_000920"
                     /gene_synonym="visC"
     CDS             13098..14300
                     /gene="ubiI"
                     /locus_tag="JNZ57_000920"
                     /gene_synonym="visC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent 2-octaprenylphenol hydroxylase"
                     /protein_id="HAY8827225.1"
                     /translation="MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVPEPLAADA
                     PPQLRVSAINAASEKLLTRLGVWQDILSRRASCYHGMEVWDKDSFGHISFDDQSMGYS
                     HLGHIVENSVIHYALWNKAQQSSDITLLAPAELQQVAWGENETFLTLKDGSMLTARLV
                     IGADGANSWLRNKADISLTFWDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLS
                     DPHLCSIVWSLSPEEAQRMQQASEDEFNRALNIAFDNRLGLCKVESARQVFPLTGRYA
                     RQFAAHRLVLVGDAAHTIHPLAGQGVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRR
                     YERSRKHSAALMLAGMQGFRDLFSGTNPAKKLLRDIGLKLADTLPGVKPQLIRQAMGL
                     NDLPEWLR"
     gene            complement(14374..14457)
                     /locus_tag="JNZ57_000921"
     CDS             complement(14374..14457)
                     /locus_tag="JNZ57_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827226.1"
                     /translation="MSKNTKSKNNDIRKYNAKTEVKLVYFK"
     gene            14747..15841
                     /gene="gcvT"
                     /locus_tag="JNZ57_000922"
     CDS             14747..15841
                     /gene="gcvT"
                     /locus_tag="JNZ57_000922"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HAY8827227.1"
                     /translation="MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRTDA
                     GMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVY
                     YFTEDLFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLF
                     NDAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKP
                     CGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIAWEPADRDFIGREALEVQREH
                     GTEKLVGLVMTEKGVLRNELPVRFTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI
                     GETAIVQIRNREMPVKVTKPVFVRNGKAVA"
     gene            15865..16254
                     /gene="gcvH"
                     /locus_tag="JNZ57_000923"
     CDS             15865..16254
                     /gene="gcvH"
                     /locus_tag="JNZ57_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HAY8827228.1"
                     /translation="MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVD
                     LPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWI
                     FKIKASDESELESLLDATAYEALLEDE"
     gene            16373..19246
                     /gene="gcvP"
                     /locus_tag="JNZ57_000924"
     CDS             16373..19246
                     /gene="gcvP"
                     /locus_tag="JNZ57_000924"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HAY8827229.1"
                     /translation="MTQTLSQLENSGAFIERHIGPDAAQQQEMLNAVGAQSLNALTGQ
                     IVPKDIQLATPPQVGAPATEYAALAELKAIASRNKRFTSYIGMGYTAVQLPPVILRNM
                     LENPGWYTAYTPYQPEVSQGRLEALLNFQQVTLDLTGLDMASASLLDEATAAAEAMAM
                     AKRVSKLKNSNRFFVASDVHPQTLDVVRTRAETFGFEVIVDDAQKVLDHQDVFGVLLQ
                     QVGTTGEIHDYTALISELKSRKIVVSVAADIMALVLLTAPGKQGADIVFGSAQRFGVP
                     MGYGGPHAAFFAAKDEYKRSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNI
                     CTSQVLLANIASLYAVYHGPVGLKRIANRIHRLTDILAAGLQQKGLKLRHAHYFDTLC
                     VEVADKAGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLEID
                     TLDKDVAHDSRSIQPAMLRDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIP
                     LGSCTMKLNSAAEMIPITWPEFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYDAVC
                     MQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVAC
                     DKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDG
                     ANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHSVV
                     QIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKKASQVAILNANYIASRLQD
                     AFPVLYTGRDGRVAHECILDIRPLKEETSISELDIAKRLIDYGFHAPTMSFPVAGTLM
                     VEPTESESKVELDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAEWAHP
                     YSREVAVFPAGVADKYWPTVKRLDDVYGDRNLFCSCVPISEYQ"
     gene            19512..20255
                     /locus_tag="JNZ57_000925"
     CDS             19512..20255
                     /locus_tag="JNZ57_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY8827230.1"
                     /translation="MAIALVTGGSRGIGRATALLLAKEEYTVAVNYQQNLHAAQEVVN
                     LITQAGGKAFVLQADISDENQVIAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAE
                     RINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASK
                     GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGELGRVDRVKSNIPMQRGGQA
                     EEVAQAIVWLLSDKASYVTGSFIDLAGGK"
     gene            complement(20312..21745)
                     /locus_tag="JNZ57_000926"
     CDS             complement(20312..21745)
                     /locus_tag="JNZ57_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708664.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HAY8827231.1"
                     /translation="MKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHG
                     VPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEA
                     QPNEEGLKFYDSLFDELLKYNIEPVITLSHFEIPLHLVQQYGSWTNRKVVDFFVRFAE
                     VVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHDNPEETMYQVLHHQFV
                     ASALAVKAARRINPEMKVGCMLAMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLRGY
                     YPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMINAVKAEGGTGDAISGFE
                     GSVPNPYVKASDWGWQIDPVGLRYALCELYERYQRPLFIVENGFGAYDKVEEDGCIND
                     DYRIDYLRAHIEEMKKAVTYDGVDLMGYTLWGCIDCVSFTTGQYSKRYGFIYVNKHDD
                     GTGDMSRSRKKSFNWYKEVIASNGEKL"
     gene            21790..22101
                     /locus_tag="JNZ57_000927"
     CDS             21790..22101
                     /locus_tag="JNZ57_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HAY8827232.1"
                     /translation="MQPNDITFFQRFQDDIMAGRKTITIRDESESHFKTGDVLRVGRF
                     EDDGYFCTIEVTATSTVTLDTLTEKHAEQENMTLTELIKVIADIYPGQTQFYVIEFKC
                     L"
     gene            22265..22924
                     /locus_tag="JNZ57_000928"
     CDS             22265..22924
                     /locus_tag="JNZ57_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HAY8827233.1"
                     /translation="MVQKPLIKQGYSLAEEIANSVSHGIGLVFGIVGLVLLLVQAVDL
                     NASATAITSYSLYGGSMILLFLASTLYHAIPHQRAKMWLKKFDHCAIYLLIAGTYTPF
                     LLVGLDSPLARGLMIVIWSLALLGILFKLTIAHRFKILSLVTYLAMGWLSLVVIYEMA
                     VKLAAGSVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYIGQ
                     A"
     gene            complement(23120..24100)
                     /gene="ygfZ"
                     /locus_tag="JNZ57_000929"
     CDS             complement(23120..24100)
                     /gene="ygfZ"
                     /locus_tag="JNZ57_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-modifying protein YgfZ"
                     /protein_id="HAY8827234.1"
                     /translation="MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQ
                     VTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYA
                     VFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSREKQVVKEGATTLLWFEHPAER
                     FLIVTDEATANMLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQA
                     LGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAGEDLELKMGENWRRT
                     GTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDANTLHIEPLPYSLEE"
     gene            24343..24609
                     /gene="sdhE"
                     /locus_tag="JNZ57_000930"
     CDS             24343..24609
                     /gene="sdhE"
                     /locus_tag="JNZ57_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000354044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD assembly factor SdhE"
                     /protein_id="HAY8827235.1"
                     /translation="MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFI
                     RLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNWERGPVAI"
     gene            24590..24997
                     /locus_tag="JNZ57_000931"
     CDS             24590..24997
                     /locus_tag="JNZ57_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin CptA"
                     /protein_id="HAY8827236.1"
                     /translation="MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMV
                     LLSLVVFDCVRSQRRINARQGEIRLLMDGRLRWQGQEWSIVKAPWMIKSGMMLRLRSD
                     GGKRQHLWLAADSMDEAEWRDLRRILLQQETQR"
     gene            complement(25037..25558)
                     /gene="fldB"
                     /locus_tag="JNZ57_000932"
     CDS             complement(25037..25558)
                     /gene="fldB"
                     /locus_tag="JNZ57_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldB"
                     /protein_id="HAY8827237.1"
                     /translation="MNMGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPKLME
                     QYDVLILGIPTWDFGEIQEDWEAVWDQLDDLNLEGKIVALYGLGDQLGYGEWFLDALG
                     MLHDKLSTKGVKFVGYWPTEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSW
                     CEQILNEMAEHYA"
     gene            25670..26566
                     /gene="xerD"
                     /locus_tag="JNZ57_000933"
     CDS             25670..26566
                     /gene="xerD"
                     /locus_tag="JNZ57_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HAY8827238.1"
                     /translation="MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRG
                     LTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLAS
                     PKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDI
                     SLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQM
                     TRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTT
                     QIYTHVATERLRQLHQQHHPRA"
     gene            26591..27301
                     /gene="dsbC"
                     /locus_tag="JNZ57_000934"
     CDS             26591..27301
                     /gene="dsbC"
                     /locus_tag="JNZ57_000934"
                     /EC_number="5.3.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000715205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional protein-disulfide
                     isomerase/oxidoreductase DsbC"
                     /protein_id="HAY8827239.1"
                     /translation="MKKGFMLFTLLAAFSGFAQADDAAIQQTLAKMGIKSSDIQPAPV
                     AGMKTVLTNSGVLYITDDGKHIIQGPMYDVSGAAPVNVTNKMLLKQLNALEKEMIVYK
                     APQEKHVITVFTDITCGYCHKLHEQMADYNALGITVRYLAFPRQGLESQAEQQMKAIW
                     CAKDKNKAFDDVMAGKAATPASCDIDIADHYALGVQLGVSGTPAIVLSNGTLVPGYQP
                     PKEMKEFLDEHQKMTSGN"
     gene            27307..29040
                     /gene="recJ"
                     /locus_tag="JNZ57_000935"
     CDS             27307..29040
                     /gene="recJ"
                     /locus_tag="JNZ57_000935"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HAY8827240.1"
                     /translation="MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERS
                     VKGMLPWQQLSGVEKAVEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRPLGCSN
                     IDYLVPNRFEDGYGLSPEVVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTD
                     HHLPGETLPAAEAIINPNLRDCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIA
                     IPNLAELLDLVALGTVADVVPLDANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQ
                     KLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNIGEARVLANELDALNQTRKEIEQ
                     GMQIEALTLCEKLERSRDTLPGGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAG
                     DGTLKGSGRSIQGLHMRDALERLDTLYPGMMLKFGGHAMAAGLSLEEDKFELFQQRFG
                     ELVTEWLDPSLLQGEVVSDGPLSPAEMTMEVAQLLRDAGPWGQMFPEPLFDGHFRLLQ
                     QRLVGERHLKVMVEPVGGGPLLDGIAFNVDTALWPDNGVREVQLAYKLDINEFRGNRS
                     LQIIIDNIWPI"
     gene            29131..30229
                     /gene="prfB"
                     /locus_tag="JNZ57_000936"
     CDS             join(29131..29205,29207..30229)
                     /gene="prfB"
                     /locus_tag="JNZ57_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311790.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HAY8827241.1"
                     /translation="MFEINPVNNRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQP
                     DVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETFNEAVAE
                     LDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRG
                     FKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFS
                     SAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQN
                     DRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSRIK
                     DLRTGVETRNTQAVLDGSLDQFIEASLKAGL"
     gene            30239..31756
                     /gene="lysS"
                     /locus_tag="JNZ57_000937"
     CDS             30239..31756
                     /gene="lysS"
                     /locus_tag="JNZ57_000937"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HAY8827242.1"
                     /translation="MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDH
                     TSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARD
                     DLPEGVYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL
                     QDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGA
                     AARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFT
                     MMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIK
                     KYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITE
                     YPAEVSPLARRNDINPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFLDQVAAKDAG
                     DDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMRPVK"
     gene            complement(31799..32347)
                     /gene="idi"
                     /locus_tag="JNZ57_000938"
     CDS             complement(31799..32347)
                     /gene="idi"
                     /locus_tag="JNZ57_000938"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HAY8827243.1"
                     /translation="MQTEHVILLNAQGVPTGTLEKYAAHTADTLLHLAFSSWLFNAKG
                     QLLVTRRALSKKAWPGVWTNSVCGHPQLGERNEDAVIRRCRYELGVEITPPESIYPDF
                     RYRATDPNGIVENEVCPVFAARTNSALQINDDEVMDYQWCDLADVLHGIDATPWAFSP
                     WMVMQAANSEARKLLSAFAQHN"
     gene            32402..32473
                     /locus_tag="JNZ57_000939"
     CDS             32402..32473
                     /locus_tag="JNZ57_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827244.1"
                     /translation="MINQVSVYRQPPVLSGCRQVKTI"
     gene            complement(32470..32595)
                     /locus_tag="JNZ57_000940"
     CDS             complement(32470..32595)
                     /locus_tag="JNZ57_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827245.1"
                     /translation="MNLLMRAIFSLLLLFTLSIPVISDCVAMAIESRFKYMMLLF"
BASE COUNT         7710 a         8241 c         8838 g         7836 t
ORIGIN      
        1 cggacgatgt ttgatatggc gcacgccagg aaacagcatc ggcgtcagaa agtacatcgt
       61 cagcggcggc gctgattgac gcccccgtca gcaggcgaat ttgatacggc tttttggcct
      121 catgctgttc gttagctctg cgggcaatcg cggtgggtag ggctttcggc gaacccgccg
      181 gggtaaagcc gctaaatgcc accatgtcgt tatgctggat aatttctgcc gcttcatcgg
      241 cggtcatcct tgtccactga gtttccattt ttactccttc gttcgcaggg attaatgacc
      301 aacgaaatta ggtttacgtt tttcgaggaa agcgttcatt ccttcctggt aatcttcgct
      361 gtcataaacc gcgcgtcgca tcccctgaat acgttcaaat tcatcggagt tcatggtgtg
      421 cgcttcgccc agtacacgca gctcttcttt gataacagca atggctaacg gcgctttctc
      481 agagatgtgg tgcgccattt gtaaggtgaa atcttccagt tcttccactt ccacaacatg
      541 gttgaggatg ccgacagcca gcgcgcgctg ggcggtgatt ggcgaagcgg taaaaatcag
      601 ctctttgaca atgtggaagc ccgcgtcgcg ggtcaggttg tgaatgccga ccaggttata
      661 cgggacgccg aggtttacag gcgtcattga gaaggttgag gtactggcgg cgatgatcag
      721 atcggaactc atgatcattt caaatgcgcc accccaaaca ctaccttcca ccatcgaaat
      781 gatcggtttc gggaattttt ggatcatgcg ggtgatttga cgcaatggat catcatagga
      841 gagcggatcg cgaccgccag acggcagttc gtgaatatcg tgacctgcgg agaagacttt
      901 ggatccactc ggcgcgcgca aaatgataca gcgaatttcc ggccggttga gatcgcttaa
      961 cgcctgcata agatcatcaa taaagacttt acttaaggca ttaagttttc ggccatagtt
     1021 aaactcaatg accgccactt tgttgatagt ggcaacgttc acatactgat aagacataaa
     1081 aattccttta atcaaaatat tgcgtctgga taaattcact gagctgccgc aggccggtgc
     1141 gcggtgagag cgtattgttt ttgaccgcta aaagcgtctg gcggtaatag cgatcgaaat
     1201 cttcattcgc gaacaggtga ttcagtactt cttcttcggt ctgcttacgc agccattcca
     1261 ccgattgttg ttgccgcact tgttgtaaac gaccactggc agttagcgcg gttttgaact
     1321 cgatgatggc gtgccagatc tcatcgattc cacgtttttc cagtgcgcta caagtcagaa
     1381 cccgtggctg ccattcgtcg tatttacgtc gcagaatatg cagggcactc tcgtacatat
     1441 gccgggcaat ggcgacattg gtatggttat cgccatcgtc tttgttgata acgatcagat
     1501 cagccacttc catcagccct tttttaatgc cctgcagatc atcgccgcca ccggcaattt
     1561 gcaacgagat aaaacagtcc accatgcggg cgacttctgt ttccgactgc ccgacgccaa
     1621 ccgtttcgac aatcactacg tcataacccg ccgcttcgca taacagcatt aattcccgcg
     1681 ctcgctgact ggcaccgccc agatgaccgg aggatggtac cgggcgaata aacgccgctt
     1741 cggcacgcgc caggtcattc atgcggattt tatccccgag aatgctaccg ccagtgaccg
     1801 ggctgctggg atcgaccgca ataaccgcga cctttaatcc ctctcgaatc aacaacatgc
     1861 caaaggcctc aagaaaggta cttttccccg cgctgggggt gccggtaacg cccagtcgca
     1921 gggtgttacc gcagtacggc ataatggcat caagcagctg cgtacttagt gcctgatgac
     1981 gcgggtgacg gctttccacc agcgtcatgg cctgggcgag tgtggcacgc tcaccctgac
     2041 gtaagcggcg aatactttct gccagcgtgg cttcattaat catgatgctg gcttatcaga
     2101 ttcagtacgt cgcgcacact gtcgagcata ggtgtacctg gaccataaat cgcgccacgc
     2161 cgcgctcttg caggaaggcg taatcctgcg gtggaatgac gccaccggcg actacgcaga
     2221 tatcttcgcg tccccatttt ttcagcgcct cgaccagttc cgggatcagc gttttatgac
     2281 cggcagccag tgaggatgcg cccactacgt gaacgtcatt ttctactgcc aggcgggcga
     2341 tctcttcagg tgtagagaac atcgggctta aatctacgtc gaaaccgaga tcggaatagg
     2401 cgctggcgat cactttcgag ccgcgatcgt gcccatcctg gcccattttg gcgatcagaa
     2461 tgcgcgggcg acgaccattg tcggcaagga actgctccgt ttgcgcaaca atggcatcga
     2521 actcggaggc cgatttctca gattgatgat agctttgcgc aatcacgccg gtaacacact
     2581 ggcttggcac cagataacgg tcgaaagcgg cttccagcgc atcggaaatt tcacccaggg
     2641 tggcgcgaac gcgagcggca ttaacagcgg cagccagcag gttttcgtta tgctgtgcgg
     2701 cgtgagtcag ggcgttcaac gcggcggtta cggcggcatc atcacgggtg gcgcgaatgc
     2761 gttccagcaa agcaatttgc tcgttacgca ccatcacgtt gtcgatctca agtacatcgg
     2821 tttcgtcttc gtgatccagt ttgtacttgt tgacaccaac gatgacacgt ttgccctggt
     2881 cgataagcga ctgttcgcgc gctgaggcct attcgatcat tcgttttggc agacctgctt
     2941 cgatcgcttt cgccatacca ccggcttcgt cgatctgttg gataatagct ctggcttgtt
     3001 tgacgatttg atcggtcagc gactcaatgt aataggatcc ggccagagga tcgacggtgc
     3061 ggcagagttc tgattcttcc tggatgatga tctgggtgtt gcgggcaatg cgtgctgaga
     3121 aatcggtagg caaaccaagc gcttcgtcaa aggcgttggt atgcagtgac tgagtaccgc
     3181 ccagcgtcgc agccagtgct tcaatggtgg tgcggataac gttgttatac ggatcctgtt
     3241 cagtcaggct ccagcctgag gtctggcagt gggtacgcag cgccagtgat ttcgggtcct
     3301 gtgcgccaaa tccactgacc gcttcgctcc ataaataacg tgccgcacgc aacatggcga
     3361 cgttcataaa cagatccatg ccgatgccga agaagaacga caggcgagga gcgaagtcat
     3421 caattttcag tccggcagag attgctgctt tgatgtactc aatcccatca gcgagcgtaa
     3481 atgctacctg ctgcacgcag ttggcacccg cttcacccat gtggtaaccg ctgatactga
     3541 tggtattaaa tcgcggcatg ttgccggaac accaggcgat gatgtcggcg ataatgcgca
     3601 ttgacggttt tggcgggtaa atataggtgt tgcggcagag gtactctttg aggatatcgt
     3661 tctgaatggt gccggtcagt ttatcaggtg taacaccttg ctcttccgcg gcgacgatat
     3721 aaaacgccag tactggtagc actgcgccat tcatggtcat cgaaaccgac attttatcca
     3781 gcgggatctg gtcgaacagg actttcatat cttccacggt gtcgatagcg acgcccgctt
     3841 tgccgacgtc gcccgccacg cgcgggttat cggagtcgta gcctcggtgg gtggcaaggt
     3901 caaacgcaac ggaaagacct ttttacccgg cggccaggtt acggcgataa aaagcgttgg
     3961 actcttttgc tgttgaaaaa ccagcatact gacggatggt ccacggttgg gcggtataca
     4021 tagtggcacg cgggccacga acgtagggcg gcaaaccagg aagggtacct gtcacctcca
     4081 gattatcgag atcggcttcg gtatacagcg gcttgatggt gatcccttcc gcggtttgct
     4141 gaaccagcga gtcgacagtt ttctcccgac ggctcaattc cttgttggca agctgttgcc
     4201 actcctgcac gttagacatt atttgctccg taaaacgcaa tcaaaatgag ggtatttgcg
     4261 cctacggtga gctttttacg tggggttgtc gccagcaaaa aaaatgcatt cagacgtcgt
     4321 tttttgccgc ctgagatttg tctattttgt gatgtgattc aaggaataca aaaagaagtg
     4381 aggacaacgc ctgatatgtg ctatcaggca ttatttgatg gattaatcct gacgaaggac
     4441 tttgtgacca taatcgagca acgcatcagt gactttacgc atcatgcggc tttcaggagc
     4501 aaagcggtgc cagtagagca tccggcgttg aaatagccct ggcgttaagt caatcagttc
     4561 accgctggct agttctttct cgatttgcag gtgcgggatc atacagcagg tggtgccctg
     4621 gcgagcaagt tgcacgaacg cttctgaaga attaacgata tggcagggca cgctgcctgg
     4681 aggcagatcg aagttttgct gcaaaaaggc ctggtgcata tcgtcaagat ggtcaaaggc
     4741 gaccacaggt gctttcaata atgccgaacg cgttacgccg ttagggaaat atttttcggc
     4801 aaacggtttt gagctgacga acagatagtc aagcgcaccg agcttatcga caaggcaact
     4861 cggcagcgcc tgatgttgaa tactcaccgc gccgaccact tcgccgcggc gcagacgttc
     4921 ctgagtacgg gtttcatctt ctacctgcaa gttgaggcgg ataggcgaat cagccaatac
     4981 aggagccagt gccggaagca accacgtcgc cagactgtcg gcgttgaccg ccagtgaaag
     5041 cagcagcgga gtcgaaccgg tttgttcatc gcccagccac tcttcttcca gcaactccac
     5101 ctggcgcagc agtgccagca gtttttgccc ttgttccgtc gggcgcggcg gtacggtacg
     5161 caccaacagc ggctgcccga acatattttc cagttgctta atgcgctgtg agacggctga
     5221 ttgtgtaatg cacagctttt gtgccgcgcg ctcaaatcct cgttcacgta tcaccgcatc
     5281 cagtgcctgt aatgttctgt agtccgggcg tttcattgct gttgtctgct cctggtaaat
     5341 gctttttcct gcactatgac acaattttgt gtcaggttgc atataccgca gccgtcggcg
     5401 ggtaacattt gtatcaatgg ttaaacgcgc agcttaaaag atcagggatt tgcgctattg
     5461 catttcgctt agcgacttcg cgccctggtt atgttgaatg gcgtggcgtt attgcctctg
     5521 tttgcaccgt ggagcggcat acccagaccg ttgtatgctt tatttgcggg gcgaaagggg
     5581 atgcccgcca ttgcgcgata ttttatggat gagttaacca cccggcttgc caacggggtc
     5641 tgaatcgctt tttttgtata taatgcgtgt gaaatttcat accacaggcg aaacgatcat
     5701 gacgcaggat gaattgaaaa aagcagtagg atgggcggca cttcagtatg ttcagcccgg
     5761 caccattgtt ggtgtaggta caggttccac cgccgcacac tttattgacg cgctcggcac
     5821 gatgaaaggc cagattgaag gggccgtttc cagttcagat gcttccactg aaaaactgaa
     5881 aagcctcggc attcacgttt ttgatctcaa cgaagtcgac agccttggca tctacgttga
     5941 tggcgcagat gaaatcaacg gccacatgca aatgatcaaa ggcggcggcg cggcgctgac
     6001 ccgtgaaaaa atcattgctt cggttgcgga aaaatttatc tgtattgccg acgcctccaa
     6061 gcaggttgat attctgggta aattcccgct gccagtagaa gttatcccga tggcacgtag
     6121 tgcagtggcg cgccagctgg tgaaactggg cggtcgtccg gaataccgtc agggcgtggt
     6181 gaccgataat ggcaacgtga tcctcgacgt ccacggcatg gaaatccttg acccgatagc
     6241 gatggaaaac gccataaatg cgattcctgg cgtggtgact gttggcttgt ttgctaaccg
     6301 tggcgcggac gttgcgctga ttggcacacc tgacggtgtc aaaaccattg tgaaatgatc
     6361 tgacggggga acctcccccg ttaaaaaaat tctcttcatt aaatttggtg acatgtgtca
     6421 cgtttttacc tggctattgt cgattgctct aaataaatcc tctaaaccag catattcaac
     6481 caagaaatac ctttgcgtga tatttcctca acatcgcgac gcaaacgttc atattgccgc
     6541 aatattattt tttgatatgt tgaaaggcgg atgcaaatcc gcacacaaca tttcaaagac
     6601 aggattgggt aaatggcaaa ggtatcgctg gagaaagaca agattaagtt tctgctggta
     6661 gaaggcgtgc accaaaaggc gctggaaagc cttcgtgcag ctggttacac caacatcgaa
     6721 tttcacaaag gcgcgctgga tgatgaacaa ttaaaagaat ccatccgcga tgcccacttc
     6781 atcggcctgc gatcccgtac ccatctgact gaagacgtga tcaacgccgc agaaaagctg
     6841 gtcgctattg gctgtttctg tataggaaca aaccaggttg atctggatgc ggcggcaaag
     6901 cgcgggatcc cggtatttaa cgcaccgttc tcaaatacgc gctctgttgc ggagctggtg
     6961 attggcgaac tgctgctgct attgcgcggc gtgccggaag ccaatgctaa agcgcaccgt
     7021 ggcgtgtgga acaaactggc ggcgggttct tttgaagcgc gcggcaaaaa gctgggtatc
     7081 atcggctacg gtcatattgg tacgcaattg ggcattctgg ctgaatcgct gggaatgtat
     7141 gtttactttt atgatattga aaataaactg ccgctgggca acgccactca ggtacagcat
     7201 ctttctgacc tgctgaatat gagcgatgtg gtgagtctgc atgtaccaga gaatccgtcc
     7261 accaaaaata tgatgggcgc gaaagaaatt tcactaatga agcccggctc gctgctgatt
     7321 aatgcttcgc gcggtactgt ggtggatatt ccggcgctgt gtgatgcgct ggcgagcaaa
     7381 catctggcgg gggcggcaat cgacgtattc ccgacggaac cggcgaccaa tagcgatcca
     7441 tttacctctc cactgtgtga attcgacaac gtacttctga cgccacacat tggcggttcg
     7501 actcaggaag cgcaggagaa tatcggcctg gaagttgcgg gtaaattgat caagtattct
     7561 gacaatggct caacgctctc tgcggtgaac ttcccggaag tctcgctgcc actgcatggt
     7621 ggtcgtcgtc tgatgcacat ccacgaaaac cgtccgggcg tgctaactgc gctgaacaaa
     7681 atcttcgccg agcagggcgt caacatcgcc gcgcaatatc tacaaacttc cgcccagatg
     7741 ggttatgtag ttattgatat tgaagctgac gaagacgttg ccgaaaaagc gctgcaggca
     7801 atgaaagcta ttccgggtac cattcgcgcc cgtctgctgt actaattccc cttctctgaa
     7861 aattaacggg caggtcactg acttgcccgt ttttttatcc cttctccaca ccgttgccgc
     7921 gttgcgcatt ctactttgcg agtctgctcc agaaaataaa tcaaagtcag atcaatgcgt
     7981 tgtgtttatt taatggggat ttacgatggc gggacagcat ggggctgtaa cggtaaagcc
     8041 ctcaccgaag cgagggctta aaggagaagg gttatgatgc gacttgtcat catactgatt
     8101 gtactgttac tgataagttt cggagcttat taacagtcag tctctgggga ggagtcatcc
     8161 tcccttaccc ttactcacta aattaggtca aagaatcaac gatgtcaatc agggcgatgc
     8221 ggggtgcatc gccctgaacc gaactttttg atagccactt catcgcccac gtttactgcc
     8281 gtaatagatc ctttttccca aaaattatct ctgttttgca tggggttttt cgaacacgct
     8341 cgaagaaaag atttaaaggt agatcaatgc gttgtggtta tttaaagaga gcttacgata
     8401 gctgggcagc atggggctgt aacggtaaag ccctcaccga agcgagggct tgaaggagaa
     8461 gggttatgat gcgacttgcc atcatactga ttgtactgtt actcataagt ttcccagctt
     8521 attaacagtc agtcacaggg gaggagcaat cctcccttac ccttactcac taaattaggt
     8581 taaagaatca acgatgtcaa tcagggcgat gcaggtgtat cgcccttacc actcccagac
     8641 tttcgacggt gtaaccaccg caggaagagg gatatcccac tcttcaacgg ggagtttttc
     8701 caccaactga caatcatgcg cataacccac cggttgcgtt ttatagtgct gccagttttg
     8761 taaggtccga tcataaaaac caccgcccat tcccaggcgc tgaccgtact catcaaaggc
     8821 gaccagcggt gtgatcagca cgtctaatcg ggaaaggggt agcacgtcac gcacatccag
     8881 ttttggctca tggattttca acctgttcat caccagttcg ctttgcggat ggtaattcag
     8941 gaacagcaaa ttaccagcac taaagggatg caaaactgga agacatacgc gcttaccggc
     9001 gcgccagagt tgttctatta gcggctgggt gtcgagttca ccatcaaaag agaggaatac
     9061 agcgaccgta tgcgccatca ccaccggggg ataagtcatc atccgggtag cggcttgttg
     9121 acccatttcc agctgttgtt ccggcgttaa cgcacgacga cgttgccgaa tcattttgcg
     9181 gatttcttgt cgggataatg tcagtgggag ttctggtagt tgcgtcatgg ctggtgccag
     9241 ataagaaggg aatctccgag atgccgccgc aggctgtaac ccttgaaccc ttggttcaag
     9301 gtgaatgtgt cgtcgcagtt ttaaggcttc tcggacggac cgagcatgct caccaaccgc
     9361 ggagcgccac attcttgtgg tatgaaatat cggctcaggg gactggcccg cttgcgaaca
     9421 tctcagagaa attttgtctt cacggttact ctaccacagt aaaccgaaaa gtgtcattca
     9481 aagttttggt tagttttttc ggtgatgcga ccttgttcaa gtaacgcttg ttctatggtc
     9541 tgctgcagca tccgaatacg ctgttccata cttgccgcgt agtcacgagt cttcgctttt
     9601 tcttgcgcta actcatagct gatattcaat gcggcaatga agaccaactg ttcagtattt
     9661 gtgactctag tgcgttcttt cagatcttgc aaccgttggt tcagatcgtc cgctgcctga
     9721 ttcaacgcat ccctttggtc aggcgggcag ttcacacgca gtgaacggcc aaaaatttgg
     9781 atatcgacgg gttgtgcaga catgccacct tcctgctgat tgactgcgct gccttcgtct
     9841 ttagacccat ggtctgcgaa ggggcgacac tatagctacc ctgatgagaa gagacaagcc
     9901 cttttctggt ccaccagggc ccaaagtggt agcatatcat gaatattcct ccctttgacg
     9961 acgaatgctt atgtctatac agaacgaaat gcctggttac aacgaaatga accagtatct
    10021 gaaccaacaa gggacgggtc tgacccctgc cgagatgcat ggtttaatca gtgggatgat
    10081 atgtggcggt aacgatgaca gctcatggct gccgctactt cacgacctga cgaacgaagg
    10141 catggctttc ggtcatgagc tggcacaggc actgcgtaaa atgcactctg ccaccagcga
    10201 tgccctgcag gatgacggct tcctttttca gctttatctg cctgatggcg atgatgtcag
    10261 cgttttcgat cgggctgatg cattggcagg ttgggtcaat cacttcctgc ttggtcttgg
    10321 cgttacgcaa ccgaagctgg ataaagtgac cggcgaaacc ggtgaagcta tcgacgatct
    10381 gcgtaacatt gcgcaactgg gttacgacga agacgaagat caggaagagc ttgaaatgtc
    10441 gcttgaagag atcatcgaat acgttcgtgt tgccgcgctg ttatgccacg acacctttac
    10501 tcatccgcaa ccgaccgcgc cagaagtaca aaaaccgact ctacactaaa aacaaaaaac
    10561 gtaaggagag tgttatgagt gagatatccc ggcaagagtt tcagcgtcgc cgtcaggccc
    10621 tggtggagca aatgcaaccc ggcagcgccg cgctgatttt tgctgcacca gaagtaacac
    10681 gtagcgccga cagcgaatac ccctatcgtc agaacagtga cttctggtac ttcaccggct
    10741 ttaacgaacc ggaagcggtg ctggtgctga ttaaaagcga tgacactcat aaccacagcg
    10801 ttctgtttaa ccgcgttcgc gacctgacgg cggagatctg gtttggccgt cgcttaggcc
    10861 aggatgccgc gccagagaaa ctgggcgttg accgcgcact ggcattcagc gaaatcaatc
    10921 agcaacttta tcaactactt aacggcctgg atgtggttta ccatgcccag ggcgaatatg
    10981 catatgctga tgaaatcatg aacagtgcgc tggaaaaact gcgtaaaggt tcgcggcaaa
    11041 atctcaccgc accggcaacg atgatcgact ggcgtcctgt tgttcatgaa atgcgcctgt
    11101 tcaaatcgcc agaagagatt gccgtactcc gccgcgcggg agaaatcacc gccatggcac
    11161 atacacgggc gatggaaaaa tgccgtccgg gaatgttcga gtaccatctg gaaggcgaaa
    11221 ttcaccacga atttaaccgc cacggtgcgc gctatccgtc ctataacacc attgtcggca
    11281 gcggtgaaaa cggctgcatt ctgcactaca ccgaaaacga gagtgaactg cgcgacggtg
    11341 acctggtgtt gattgacgcg ggttgtgaat acaaaggtta cgcgggcgat attacccgca
    11401 ccttcccggt caacggcaaa ttcacccagg cccagcgtga aatctacgac attgtgctgg
    11461 agtctctcga aaccagcctg cgcctgtatc gtccgggaac ttccattctg gaagtcactg
    11521 gtgaagtggt gcgcatcatg gttagcggcc tggtaaaact cggcattctg aaaggtgatg
    11581 ttgatgaact gatcgctcag aatgcccatc gtcctttctt tatgcatggc cttagccact
    11641 ggttagggct agatgtccat gacgttggcg tttatggtca ggatcgctcg cgcattctgg
    11701 aaccgggcat ggtactgacc gtagagccag ggctgtatat tgcgccggat gcagaagtgc
    11761 cagaacaata tcgcggtatc ggcattcgta ttgaagacga cattgtgatt accgaaaccg
    11821 gtaacgaaaa cctcaccgcc agcgtggtga aaaagccgga agaaatcgaa gcgttgatgg
    11881 ctgctgcgag aaagcaatga gcgtaatcat cgtcggtggc ggcatggcgg gcgcgacgct
    11941 ggcgctggct atttcccggt taagtcacgg ggcgctgccg gtacatttga ttgaagcgac
    12001 tgcgccagag tcacatgctc atccgggctt tgatggacga gcgatagcgc tggcggcggg
    12061 tacctgtcag caactggcgc gcatcggcgt ctggcaatct ctggcggatt gcgcaactgc
    12121 catcaccacc gtgcatgtca gcgatcgtgg tcacgctgga tttgtcaccc tcgccgcaga
    12181 agattaccaa ctggcggcgc tgggacaggt tgtcgaattg cacaatgtcg ggcaacggct
    12241 gtttgcattg ctgcgtaaag cacctggcgt aacgctgcat tgccctgatc gcgtggctaa
    12301 cgttgcccgt actcagagtc acgttgaagt gacgctggag agtggcgaga cgctgacggg
    12361 ccgcgtgctg gtagcagctg atggcaccca ttcagcgtta gccaccgcgt gcggcgttga
    12421 ctggcagcag gagccttacg aacaactggc cgtgattgcc aacgttgcga cttccgttgc
    12481 gcacgaaggc cgcgcttttg aacgcttcac gcaacatggc ccgctggcga tgttgccgat
    12541 gtctgacgga cgctgttcgc tggtctggtg tcatccactg gaacggcgcg aagaggtgct
    12601 gtcgtggagc gacgagaagt tttgccgtga actccagtcg gcctttggct ggcgacttgg
    12661 aaaaattacc cacgccggta aacgcagtgc ttatccgctg gcgttaaccc gcgccgccag
    12721 agctattacc catcgtaccg tgctggtggg caatgcggcg caaactctgc acccgattgc
    12781 cgggcaaggg tttaacctcg gtatgcgaga tgtcatgagc cttgcggaaa ccctgactca
    12841 ggcgcatgag cgcggagaag acatcggtga ttacggcata ttgtgccgct atcagcagcg
    12901 tcgacagagc gatcgcgaag caaccatcgg cgtcacggac agcctggtac atctttttgc
    12961 caaccgttgg gcaccgctgg ttgtcgggcg caacatcgga ctgatgacga tggaattatt
    13021 caccccggca cgcgatgtgc tggcgcagcg caccctcggt tgggtggcgc gttgaaggcg
    13081 gttttaagga ataaacaatg caaagtgttg atgtagccat tgttggtggc ggcatggtgg
    13141 ggctggcggt tgcctgcggc ttacagggga gcggcttacg cgttgccgta ctggagcagc
    13201 gcgtaccgga acctctggcg gcggatgcac caccacaact gcgcgtttcg gctatcaatg
    13261 ccgccagcga aaaattactc acccgtcttg gcgtctggca ggacattctc tctcgtaggg
    13321 ccagttgtta tcacggtatg gaagtgtggg acaaagacag ttttggtcac atttcgtttg
    13381 acgatcaaag catgggctat agccatcttg ggcatatcgt tgaaaactca gtgattcact
    13441 acgcgctgtg gaacaaagcg cagcagtcgt cagatatcac tctgttggcc cccgcagaat
    13501 tacagcaggt cgcctgggga gaaaatgaaa ctttcctgac gctgaaagat ggcagcatgt
    13561 taacggcgcg tctggtgatt ggcgcggacg gtgctaattc ctggttgcgc aacaaagcag
    13621 atatttcgct gactttctgg gattatcaac atcacgcgct ggtagcgacc attcgcacgg
    13681 aagaaccgca tgatgcggtg gcgcggcagg ttttccatgg cgaaggcatt ctggcctttt
    13741 taccgcttag cgatccgcat ctttgctcaa ttgtctggtc actgtcgcca gaggaagcgc
    13801 agcggatgca gcaggcaagt gaagatgaat ttaatcgcgc gttaaatatc gcttttgata
    13861 atcgcctggg cttatgcaag gttgagagcg cgcgtcaggt gttcccactg acggggcgtt
    13921 atgcgcgcca gtttgccgcg caccgtctgg tgctagtggg cgacgccgcg cataccattc
    13981 acccgctggc ggggcaggga gtaaatctcg gctttatgga tgctgcagag ctgattgctg
    14041 aactgaaacg gttgcatcgt caggggaaag acatcgggca gtacatttac ctgcgccggt
    14101 atgagcgtag ccgcaagcac agtgcggcgc tgatgctggc tggtatgcag ggattccgcg
    14161 atctgttttc cggtaccaat ccggcgaaaa aactgctgcg tgatattggt ttgaaactgg
    14221 ccgacacgct tcctggcgtt aaaccacaac ttatccgcca ggcaatggga ttaaacgatt
    14281 tgcctgaatg gctgcgttaa aaatttctct tctgctgttt atttgatacc catcacactt
    14341 tcatctcccg gttttttcgc cgggagattt tcctcatttg aaataaacta atttcacctc
    14401 cgttttcgca ttatattttc taatgtcatt attttttgat ttagtgtttt ttgacatttt
    14461 tttagctctt aatattgcct tattcaaatt agctttctaa tggcatcatc tttatataga
    14521 aactggtgtg ttttttggtt ttttattctg tcgcgatttt ggcgtttttt aaccataagc
    14581 taatgtgatg atcaatttta ccttatggtt aacagtctgt ttcggtggta agttcaggca
    14641 aaagagaacg attgcgttgg ggaccgggag tggctccgat gctgggtttc gtggtgataa
    14701 tttcaccatg aaaagttgtc agccccgctt attcaatgag gacaagatgg cacaacagac
    14761 tcctttgtac gaacaacaca cgctttgcgg cgctcgcatg gtggatttcc acggctggat
    14821 gatgccgctg cattacggtt cgcaaatcga cgaacatcat gcggtacgta ccgatgccgg
    14881 aatgtttgat gtgtcacata tgaccatcgt cgatctccgc ggcagccgca cccgggagtt
    14941 tctgcgttat ctgctggcga acgatgtggc gaagctcacc aaaagcggca aagcccttta
    15001 ctcggggatg ttgaatgcct ctggcggtgt gatagatgac ctcatcgtct actactttac
    15061 tgaagattta ttccgcctcg ttgttaactc cgccacccgc gaaaaagacc tctcctggat
    15121 tacccaacac gctgaacctt tcggcatcga aattaccgtt cgtgatgacc tttccatgat
    15181 tgccgtgcaa gggccgaatg cgcaggcaaa agctgccaca ctgtttaatg acgcccagcg
    15241 tcaggcggtg gaagggatga aaccgttctt tggcgtgcag gcgggcgatc tgtttattgc
    15301 caccactggt tataccggtg aagcgggcta tgaaattgcg ctgcccaatg aaaaagcggc
    15361 cgatttctgg cgtgcgctgg tggaagcggg tgttaagcca tgtggcttgg gcgcgcgtga
    15421 cacgctgcgt ctggaagcgg gcatgaatct ttatggtcag gagatggacg aaactatttc
    15481 tcctttagcc gccaacatgg gctggactat cgcctgggaa ccggcagatc gtgactttat
    15541 cggtcgtgaa gccctggaag tgcagcgtga gcatggtaca gaaaaactgg ttggtctggt
    15601 gatgaccgaa aaaggcgtgc tgcgtaatga actgccggta cgctttaccg atgcgcaggg
    15661 caaccagcat gaaggcatta tcaccagcgg tactttctcc ccgacgctgg gttacagcat
    15721 tgcgctggcg cgcgtgccgg aaggtattgg cgaaacggcg attgtgcaaa ttcgcaaccg
    15781 tgaaatgccg gttaaagtga caaaacctgt ttttgtgcgt aacggcaaag ccgtcgcgtg
    15841 atttactttt ttggagattg attgatgagc aacgtaccag cagaactgaa atacagcaaa
    15901 gaacacgaat ggctgcgtaa agaagccgac ggcacttaca ccgttggtat taccgaacat
    15961 gctcaggagc tgttaggcga tatggtgttt gttgacctgc cggaagtggg cgcaacggtt
    16021 agcgcgggcg atgactgcgc ggttgccgaa tcagtaaaag cggcgtcaga catttatgcg
    16081 ccagtaagcg gtgaaatcgt ggcggtaaac gacgcactga gcgattcccc ggaactggtg
    16141 aacagcgaac cgtatgcagg tggctggatc tttaaaatca aagccagcga tgaaagcgaa
    16201 ctggaatcac tgctggatgc gaccgcatac gaagcattgt tagaagacga gtaacggctt
    16261 tattcctctt ctgcgggaga ggatcagggt gaggaaaatt tatgcctcac cctcactctc
    16321 ttcgtaagga gagaggttca caattcactg cacgtttcag gaaccatcgc tcatgacaca
    16381 gacgttaagc cagcttgaaa acagcggcgc ttttattgaa cgccatatcg gaccggacgc
    16441 cgcgcaacag caagaaatgc tgaatgccgt tggcgcacaa tcgttaaacg cgctgaccgg
    16501 ccagattgta ccgaaagata ttcagcttgc gaccccgccg caggttggcg caccggcgac
    16561 cgaatacgcc gcactggcag aactcaaggc tattgccagt cgcaataaac gcttcacgtc
    16621 ttacatcggc atgggttaca ccgccgtgca gctaccgccg gttatcctgc gtaacatgct
    16681 ggaaaatccg ggctggtata ccgcgtacac tccgtatcaa cctgaagtct cccagggccg
    16741 ccttgaagca ctgctcaact tccagcaggt aacgctggat ttgactggac tggatatggc
    16801 ctctgcttct cttctggacg aggccaccgc tgccgccgaa gcaatggcga tggcgaaacg
    16861 cgtcagcaaa ctgaaaaatt ccaaccgctt cttcgtggct tccgatgtgc atccgcaaac
    16921 gctggatgtg gtccgtactc gtgccgaaac ctttggtttt gaagtgattg tcgatgacgc
    16981 gcaaaaagtg ctcgaccatc aggacgtctt cggcgtgctg ttacagcagg taggcactac
    17041 cggtgaaatt cacgactaca ctgcgcttat tagcgaactg aaatcacgca aaattgtggt
    17101 cagcgttgcc gccgatatta tggcgctggt gctgttaact gcgccgggta aacagggcgc
    17161 ggatattgtt tttggttcgg cgcaacgctt cggcgtgccg atgggctacg gtggcccaca
    17221 cgcggcattc tttgcggcga aagatgaata caaacgctca atgccgggcc gtattatcgg
    17281 tgtatcgaaa gatgcagctg gcaataccgc gctgcgcatg gcgatgcaga ctcgcgagca
    17341 acatatccgc cgtgagaaag cgaactccaa catttgtact tcccaggtac tgctggcaaa
    17401 catcgccagc ctgtatgccg tttatcacgg cccggttggc ctgaaacgta tcgctaaccg
    17461 cattcaccgt ttgaccgata tcctggcggc aggcctgcaa caaaaaggtc tgaagctgcg
    17521 ccatgcgcac tatttcgaca ctctgtgtgt ggaagtggcc gacaaggcgg gcgtactggc
    17581 gcgtgccgaa gcggctgaaa tcaacctgcg tagcgatatc ctgaacgcgg ttgggatcac
    17641 ccttgatgaa accaccacgc gtgaaaacgt aatgcagctt ttcagcgtgc tgctgggcga
    17701 taaccacggg ctggagatcg acacgctgga caaagacgtg gctcacgaca gccgctctat
    17761 tcagcctgcg atgctgcgcg acgacgaaat cctcactcat ccggtgttta atcgctacca
    17821 cagcgaaacc gaaatgatgc gctatatgca ctcgctggag cgtaaagatc tggcgctgaa
    17881 tcaggcgatg atcccgctgg gttcctgcac catgaaactg aactccgccg ccgagatgat
    17941 cccaatcacc tggccggaat ttgccgaact gcacccgttt tgcccgccgg aacaggctga
    18001 aggttatcag cagatgattg cgcagctggc tgactggctg gtgaaactga ccggttacga
    18061 cgccgtttgt atgcagccga actccggcgc acagggcgaa tacgcgggcc tgctggcgat
    18121 tcgtcattat catgaaagcc gcaacgaagg gcatcgcgat atctgcctga tcccggcttc
    18181 tgcgcacgga actaaccccg cttctgcaca tatggcagga atgcaggtgg tggttgtggc
    18241 gtgtgataaa aacggcaaca tcgatctgac tgatctgcgc gcgaaagcgg aacaggcggg
    18301 cgataacctc tcctgtatca tggtgactta tccctctacc cacggcgtgt atgaagaaac
    18361 gatccgtgaa gtgtgtgaag tcgtgcatca gttcggcggt caggtttacc ttgatggcgc
    18421 gaacatgaac gcccaggttg gcatcacctc gccgggcttt attggcgcgg acgtttcgca
    18481 cctcaacctg cataaaactt tctgcattcc gcacggcggt ggtggtccgg gtatgggacc
    18541 gatcggtgtg aaagcgcatc tggcaccgtt tgtaccgggt catagcgtgg tgcaaatcga
    18601 aggcatgtta acccgtcagg gcgcagtttc tgcggcaccg ttcggtagcg cctctatcct
    18661 gccaatcagc tggatgtaca tccgcatgat gggcgcagaa gggctgaaaa aagcaagcca
    18721 ggtggcaatc ctcaacgcca actatattgc cagccgcctg caggatgcct tcccggtgct
    18781 gtataccggt cgcgacggtc gcgtggcgca cgaatgtatt ctcgatattc gcccgctgaa
    18841 agaagaaacc agcatcagcg agctggatat tgccaagcgc ctgatcgact acggtttcca
    18901 cgcgccgacg atgtcgttcc cggtggcggg tacgctgatg gttgaaccga ctgaatctga
    18961 aagcaaagtg gaactggatc gctttatcga cgcgatgctg gctatccgcg cagaaattga
    19021 ccaggtgaaa gccggtgtct ggccgctgga agataacccg ctggtgaacg cgccgcacat
    19081 tcagagcgaa ctggtcgccg agtgggcgca tccgtacagc cgtgaagttg cggtattccc
    19141 ggcaggcgtg gcagacaaat actggccgac ggtgaaacgt ctggatgatg tttacggcga
    19201 ccgtaacctg ttctgctcct gcgtaccgat tagcgaatac cagtaattca ctgattcgac
    19261 tattttctaa aggagcttcg gcgccttttt agtcagatga caaagtacaa aagtgctcag
    19321 acagtcccct cgcccctttg gggagagggt tagggtgagg ggaacaggcc ggcactggcg
    19381 cgaatattta ccctcacccc ggccctctcc ctgaaagggc gaggggaaaa gcgtgccaac
    19441 attgaagatt gagccagttt gttagcaatc tcaaagatac gtcaacgaat taatttttct
    19501 cggaaaaaca aatggctata gcacttgtga ccggtggcag tcgcggcatc gggcgggcaa
    19561 ctgcattact gttggcgaaa gaagagtata cggtggcggt taattatcaa caaaacctcc
    19621 atgcggcgca ggaagtggtg aacttaatca cgcaagccgg tggcaaggca ttcgtgctcc
    19681 aggcggatat cagcgacgaa aatcaggtca tagcaatgtt tacagcaatc gatcagcacg
    19741 atgaaccgct agcagcgctg gtcaataacg ccgggatctt gtttacccag tgcaccgttg
    19801 aaaaccttac cgcagagcga atcaaccgag tactttccac caacgtgacg ggatattttc
    19861 tctgctgccg cgaggcggta aaacgcatgg cgcttaaaaa tggtggcagt ggcggcgcta
    19921 tcgtcaatgt ctcttcggtg gcctcacggt tgggttcgcc aggggaatat gttgattacg
    19981 cggcatcgaa aggggcgatt gatacgttaa ccaccggact atcgctggaa gtcgccgcgc
    20041 aggggatccg cgttaactgc gtgcggccag ggtttattta taccgaaatg cacgccagcg
    20101 gcggcgagct tggacgcgtc gatcgcgtta agtcgaacat ccccatgcag cgtggtggac
    20161 aggcagaaga ggtcgcgcag gccattgtct ggctactaag tgataaagcc tcttacgtca
    20221 cgggaagttt tatcgatttg gcgggcggga aataaaacag ggaagttgtc tgaccggatg
    20281 caacaagtat tgcatccggt acttcatcga cttaaagctt ctcgccgttg ctggcaatca
    20341 cctctttgta ccagttaaag ctcttcttac gtgaacgcga catatcgcca gtaccgtcgt
    20401 catgtttatt cacatagata aagccgtagc gtttgctgta ctgcccggta gtgaatgaca
    20461 cgcagtcgat gcagccccac agtgtgtagc ccatcagatc cacaccatcg taagtcactg
    20521 cttttttcat ctcttcaata tgggcgcgca ggtagtcaat gcggtagtcg tcgttgatgc
    20581 agccatcttc ttccactttg tcgtaagcgc caaaaccgtt ttcgacaata aacagcggcc
    20641 tctgataacg ctcatacagt tcgcaaaggg catagcgcag acctactgga tcaatctgcc
    20701 agccccagtc agacgcttta acatacgggt tcggtacgct gccttcaaaa ccagagatcg
    20761 catcgccggt gccgccttcg gccttcactg cgttgatcat gtaatagctg aaaccaagat
    20821 aatcgcaggt gccttcacgc agtacatcca gatcgccatc ttccattttg atgttaaatc
    20881 cgcgacgctc ccactcgttc aacacatagg acgggtaata gccgcgtagc tgcacatcgg
    20941 taaagacgta gcgttcgcgc atcgactcct gagcgaacat cacatcgtcc gggttacagg
    21001 agtaaggata gagcggcacc atcgccagca tacagccgac tttcatctcc gggttaatgc
    21061 gacgcgcggc tttcactgcc agggcgctgg cgacaaactg gtgatgcagc acctggtaca
    21121 tcgtctcttc cgggttgtca tgctcggtat acaccacgcc ggagcagcag taaccaaaca
    21181 gcggcgcacg ccagttacgc tggttgttta tttcgttgaa ggtcatccag tatttgactt
    21241 tatgcttgta gcgttcgaat accacttccg cgaaacggac aaagaaatca acgactttac
    21301 ggttggtcca gctaccgtat tgctgcacca gatgcagcgg tatttcaaag tgggagaggg
    21361 ttatcaccgg ttcgatgttg tatttcagca gttcatcgaa cagagagtcg taaaacttca
    21421 gcccttcttc gtttggctga gcttcatcac cttttggaaa aatacgcgtc caggcgatgg
    21481 aagtccgaaa acatttgaag cccatttcgg caaatagctt gatgtcttcc ttgtagtgac
    21541 cataaaaatc aacggcttca tggtttggat agtattttcc tggcaagact tctttggtga
    21601 tttcgcgcgg cacgccgtgt gcgccaccgg tcagaacgtc acaaatgctc ggtcctttgc
    21661 cgcctttgtt ccagccgcct tcgacctgat gagcggcaac ggcgccaccc cataagaaat
    21721 ctttcggtaa ggtgagtttt ttcactatca taggctccag atgagtcaat tcttacagga
    21781 aatagtacca tgcagccaaa cgacatcact ttttttcaac gtttccagga tgacattatg
    21841 gctgggcgta aaaccatcac catccgcgac gagtctgaat cgcacttcaa aacgggtgat
    21901 gtgcttcgtg tcggacgttt tgaagatgac ggttattttt gcacgattga agtcaccgca
    21961 acctcaaccg taacgctgga tacgctgacg gaaaaacatg cagagcagga aaatatgacc
    22021 ctgactgaac tgataaaggt cattgccgac atctatcccg gtcagacaca gttttatgtg
    22081 attgaattta aatgtcttta aattgaactc acgcctgtta gttgaaattt ctcatttaat
    22141 ttcatgattt ttaggagatt agtctcaaat cagaatttat tttagctaac aggtgttcac
    22201 tggaactatt ctcagttacg ctggagaggt atacatgtgc gtgtacgttt ctccggagta
    22261 agttatggtt cagaagcccc tcattaagca gggatattcg ctggcagagg aaattgccaa
    22321 cagcgtcagt cacggcattg ggttggtgtt tggtatcgtt gggctggtgt tgctactggt
    22381 tcaggcggtg gatctcaatg ccagcgccac agcgataacc agctacagcc tctatggcgg
    22441 cagtatgatc ctgctgttcc tcgcttcgac gctctatcac gccattcctc atcaacgggc
    22501 aaaaatgtgg ctgaagaaat ttgaccattg cgctatttac ctgttgattg ccggaaccta
    22561 cacgccgttt ttgctggtgg ggctggattc tccgttagcg cgcgggttga tgattgttat
    22621 ctggagcctg gcattgctgg ggattctgtt taaactgacc atcgcgcacc gattcaaaat
    22681 tttatctctg gtgacctatc tggcgatggg ctggctgtcg ctggtggtaa tttatgaaat
    22741 ggcagttaag ctcgcggcgg gcagcgttac cttactggcg gtaggcggcg tggtttattc
    22801 gctcggagtg attttctatg tctgcaaacg cattccctac aatcatgcca tctggcacgg
    22861 cttcgtgctc ggcggcagtg tgtgccactt tctggcgatc tatttgtata ttgggcaggc
    22921 gtaataggta tgcctttgta ggcctgataa gacgcgccag cgtcgcatca ggcatcggag
    22981 cgcaaccgcc ggatgcggcg tgaacgcctt atccgatcta cgggcctcgt ccctgttgtg
    23041 ataaaggcat caaatcccag acatgataag acgcgtcagc gtcgcatcag gcgataaatg
    23101 cctgatgcga tacagagatt tactcttcga gtgaatacgg cagcggctcg atatgcagtg
    23161 tattcgcatc gtcgcgtacg cggaagatgc tgtccggttc catatcgtta ttcatgacga
    23221 cctgtaccac gacctgacca tcttccagtt ttaccgcagc cagcaccgta ccggtacgac
    23281 gccagttctc gcccattttc agctctaagt cttcaccagc ttccggcagt cggctggcgc
    23341 tacctgccag caaccagagc gcacgtttat tggcaccacg gaattttgct cgcgccacca
    23401 tctcttgtcc ggtataacag cctttcttaa aactgatacc gcccagcgcc tggagattgg
    23461 tcgcctgtgg gataaactgc ccgctgttcg cggcatcaat caccgggaaa cccgcttcaa
    23521 tgtttaatgc cagccactgt tggctattgt tcagttccgc ttcaccgcgc agtttatcgg
    23581 tcagcatatt ggcagtagct tcatcggtta cgatcaggaa acgttctgcc gggtgttcaa
    23641 accatagcaa agtggtcgcg ccttctttaa ctacctgttt ttctctcgaa ggtagttcac
    23701 taaagagatt ggcgagcgcg gcgcgcgcct gaaaaccggc aacaccaagc agcacacgct
    23761 cgtcgtctgg cgcgatggtc actttagaga acaccgcata ttttttcagt tcagtcagct
    23821 gcggttcacg cacgctgcgc cgttcaatcc acgcaaagcc atcgccgtcg cggaacagac
    23881 gtaaattgct ccacatttta cctttggcgt cgcaatgggc ggcgagcagg tgctgatttt
    23941 ctgtcatctg gctgacatct gctgtcacct gaccctgcat atatttttcg ctgtccgcgc
    24001 cagtaatggt ggcaagcgcc cagtcatcaa gcgtcatcag cgtcagcggt aaacgggcag
    24061 aagccgtagg ctgacgggga ggaaaaggtg taaaagccat aatagagtcc tgagttgctt
    24121 aacggcgtat taataactaa tggtaaaaga gctatgaggc aatgcaagtg ctttcactac
    24181 gcgatctgtg ccttctgcga ggcgacttcc aaaaaaatga agctcttgaa ttgttgtgaa
    24241 ttaatttcgc gatcgcgatg gtgtttactg atattcccgt aaaagaagtc gaaaaacacg
    24301 ttacaatagc cgggtactgg attttcgtga gacaggaaga agatggacat taacaacaaa
    24361 gcccgcattc attgggcatg ccgccgtggt atgcgcgaac tcgatatttc aatcatgccg
    24421 tttttcgaac atgagtacga cagcttaagc gatgacgaaa aacgcatctt tattcgtctg
    24481 ctggaatgtg acgatccgga cctgtttaac tggctgatga atcacggtaa accggccgat
    24541 gcagaactgg aaatgatggt ccgactcatc cagacacgga actgggaacg tggtcctgtg
    24601 gcaatctgat ttgcgcgtct cctggcgcgc acagtggctt tccttgctga ttcatgggct
    24661 ggttgccgct gttattttac tcatgccctg gccgctcagt tacaccccgt tatggatggt
    24721 gttactttcg ctggtggtat ttgattgcgt tcgcagccag cggcgtatta atgctcgcca
    24781 gggggaaatt cgattgttga tggacgggcg tttgcgttgg caagggcagg agtggagcat
    24841 cgtcaaagca ccgtggatga ttaagagcgg catgatgctg cgtttacgtt ctgatggcgg
    24901 taaacggcaa catttatggc tggcagccga cagcatggac gaagctgaat ggcgggattt
    24961 acggcggatt ttgttgcaac aagagacgca aagataaata tgacggcaaa gcatatgcgc
    25021 taagccgtca gtgagatcag gcgtaatgct ctgccatttc gttgaggatt tgctcgcacc
    25081 agctctgaat acgctcgtcg ctaaggtcat actggttagt ttcatccagc gccagaccca
    25141 cgaacagttg cccgtcagca atcaccggtt tcgggctggt aaattcatat ccttccgttg
    25201 gccagtagcc gacgaacttc acgcctttgg tcgagagttt gtcatgcagc ataccgagcg
    25261 catcgaggaa ccactcgccg tatcccagtt gatcgccaag cccatacagt gcaacaattt
    25321 taccttcaag gttcaggtcg tcgagctgat cccagacggc ttcccagtct tcctggattt
    25381 cgccaaaatc ccaggtcggg atacccagaa tgagcacatc gtactgctcc attaatttcg
    25441 gggagtcgtc cttgaggtta tgtaaggtca ccagttctgg gccgataata tcgcggattt
    25501 tttctgccgc catttcggtg taacaggtgc tggaaccgta aaaaagaccc atattcataa
    25561 cgtaagcttc tcgattctgc tgtggctttt gcggctagtg tatcagaatc gctttagtca
    25621 cggcacaata aggcataatg gatcaaatga gtgaccataa ggggcgcaag tgaaacagga
    25681 tctggcacgc atcgagcagt ttcttgatgc tctgtggctg gaaaaaaatc tggctgaaaa
    25741 tacgttgaac gcttaccgtc gcgatctgtc aatgatggtg gagtggttgc atcaccgcgg
    25801 gttgacgctg gcgacggcgc aaagtgacga tttgcaggca ttactggcag aacggctaga
    25861 gggcgggtat aaagccacca gctcagcgcg tttgctgagt gcagtgcgcc gattgttcca
    25921 gtatctttat cgcgaaaagt ttcgtgaaga cgatcccagt gcgcatctcg cttcaccgaa
    25981 attgccacag cgtttgccaa aagatttaag cgaagcgcag gtcgaacgtt tattacaggc
    26041 accattaatt gatcagccac tggagctacg cgataaagcc atgcttgaag tgttgtatgc
    26101 taccgggctg cgtgtctctg aactggtcgg gctgacaatg agtgatatca gcctacgtca
    26161 gggcgtagtg cgggtcattg gtaaaggcaa caaagagcgc ctggtgccgt taggtgaaga
    26221 ggccgtttac tggctggaaa cctatctgga acatgggcgt ccgtggctgt tgaatggtgt
    26281 gtcaattgac gtgttgtttc ccagccagcg tgcgcagcag atgacgcgac agaccttctg
    26341 gcaccgcatt aaacattatg ccgtgctggc gggtatcgac agcgaaaagc tgtcaccgca
    26401 tgtgttgcgt cacgcttttg ccactcattt attaaatcat ggtgcggatt tacgcgtggt
    26461 gcagatgcta ctgggccaca gcgatctctc caccacgcaa atttatacgc atgtcgctac
    26521 cgagcgtctg cggcaacttc atcaacagca tcacccgcgg gcgtgatgtc tgaaaagaac
    26581 gggaagattt atgaagaaag gttttatgtt gtttactttg ttagcggcgt tttcaggctt
    26641 tgctcaggct gatgacgcgg caattcaaca aacgttagcc aaaatgggca ttaaaagcag
    26701 cgatattcag ccagcacccg tggctggcat gaagactgtg ctgactaaca gcggtgtgtt
    26761 gtacatcacc gatgacggta aacatatcat tcaggggcca atgtatgacg ttagtggcgc
    26821 ggctccggtc aatgtcacca ataaaatgct gctaaagcag ttgaatgcgc ttgaaaaaga
    26881 gatgatcgtt tataaagcgc cgcaggaaaa acacgtcatc accgtgttta ctgatattac
    26941 ctgtgggtac tgccacaaac tgcatgagca aatggcagac tacaacgcgc tggggatcac
    27001 cgtgcgttat cttgctttcc cgcgccaggg gctggagagc caggctgagc aacaaatgaa
    27061 agccatctgg tgtgcgaaag ataaaaacaa agcgtttgat gatgtgatgg ctggtaaagc
    27121 tgccactccg gcaagttgcg atatcgatat tgccgatcat tacgcacttg gcgtccagct
    27181 tggcgttagc ggcactccgg caattgtgct gagcaatggc acacttgttc cgggttacca
    27241 gccgccgaaa gagatgaaag aattcctcga cgaacaccaa aaaatgacca gcggtaatta
    27301 attcgcgtga aacaacagat acaacttcgt cgccgtgaag tcgatgaaac ggcagacttg
    27361 cccgctgaat tgcctccctt gctgcgccgt ttatacgcca gccggggagt acgcagtgcg
    27421 caagaactgg aacgcagtgt taaaggtatg ttgccctggc agcaactaag cggtgtcgaa
    27481 aaggccgttg agatccttta caacgctttt cgcgaaggaa cgcggattat tgtggtcggt
    27541 gatttcgacg ccgacggcgc gaccagcacg gctctaagcg tgctggcgat gcgcccgctt
    27601 ggttgcagca atatcgacta cctggtacca aaccgtttcg aagacggtta cggcttaagc
    27661 ccggaagtgg tcgatcaggc ccatgcccgt ggcgcgcagt taattgtcac ggtggataac
    27721 ggtatttcct cccatgcggg ggttgaacac gctcgctcgt tgggcattcc ggttattgtt
    27781 accgatcacc atttgccagg cgaaacatta cccgcggcgg aagcgatcat taaccctaac
    27841 ttgcgcgact gtaatttccc gtcgaaatca ctggcaggcg tgggtgtggc gttttatctg
    27901 atgctggcgc tgcgcacctt tttgcgcgat cagggctggt ttgatgagcg cggcatcgca
    27961 attcctaacc tggcagaact gctggatctg gtcgcgctgg ggacagtggc ggacgtcgtg
    28021 ccgctggacg ctaataatcg cattctgacc tggcagggga tgagtcgcat ccgtgccgga
    28081 aagtgccgtc cagggattaa agctctgctg gaagtggcaa accgtgatgc acaaaaactc
    28141 gccgccagcg atttaggttt tgcgctgggg ccacgtctca atgctgccgg gcgactggac
    28201 gatatgtccg tcggtgtggc gctgttgctg tgcgacaaca tcggcgaagc gcgcgtgctg
    28261 gcaaatgaac tcgatgcgct aaatcagacg cgaaaagaga tcgaacaagg aatgcagatt
    28321 gaagccttga ccctgtgcga gaaactggag cgaagtcgcg acacgctacc cggcgggctg
    28381 gcaatgtatc accccgaatg gcatcagggc gttgtcggta ttctggcttc gcgcatcaaa
    28441 gagcgttttc accgtccggt tatcgccttt gcgccagcag gtgatggtac gctgaaaggt
    28501 tccggtcgct ccattcaggg gctgcatatg cgtgatgcgc tggagcgatt agacacactc
    28561 taccccggta tgatgctgaa gtttggcggt catgcgatgg cggcgggttt gtcgctggaa
    28621 gaggataaat tcgaactctt tcaacaacgg tttggcgagc tggttaccga gtggctggac
    28681 ccttcgctat tgcaaggcga agtggtgtca gacggcccgt taagcccggc cgaaatgacc
    28741 atggaagtgg cgcagctgct gcgcgatgct ggcccgtggg ggcagatgtt cccggagccg
    28801 ctgtttgatg gtcatttccg tctgctgcaa cagcggctgg tgggcgaacg tcatttgaaa
    28861 gtcatggtcg aaccggtcgg cggcggtccg ctgctggatg gtattgcttt taatgtcgat
    28921 accgccctct ggccggataa cggcgtgcgc gaagtgcaac tggcttacaa gctcgatatc
    28981 aacgagtttc gcggcaaccg cagcctgcaa attatcatcg acaatatctg gccaatttag
    29041 cgtcatcttc tctataaaaa agagcgtgga ttgggtacaa tcccgctctt atcaccgcat
    29101 tttgactagc tcaataaaag aaatcagacc atgtttgaaa ttaatccggt aaataatcgc
    29161 attcaggacc tcacggaacg ctccgacgtt cttagggggt atctttgact acgacgccaa
    29221 gaaagagcgt ctggaagaag taaacgccga gctggaacag ccggatgtct ggaacgaacc
    29281 cgaacgcgca caggcgctgg gtaaagagcg ttcctccctc gaagccgttg tcgacaccct
    29341 cgaccaaatg aaacaggggc tggaagatgt ttctggtctg ctggaactgg ctgtagaagc
    29401 tgacgacgaa gaaaccttta acgaagccgt tgctgaactc gacgccctgg aagaaaaact
    29461 ggcgcagctt gagttccgcc gtatgttctc tggcgaatat gacagcgccg actgctacct
    29521 cgatattcag gcggggtctg gcggtacgga agcacaggac tgggcgagca tgcttgagcg
    29581 tatgtatttg cgctgggcag aatcgcgtgg tttcaaaact gaaatcatcg aagagtcgga
    29641 aggtgaagtg gcgggtatta aatccgtgac gatcaaaatc tccggcgatt acgcttacgg
    29701 ctggctgcgt acagaaactg gcgttcaccg cctggtgcgt aagagcccgt ttgactccgg
    29761 tggtcgtcgc cacacgtcgt tcagctccgc gtttgtttat ccggaagttg atgatgatat
    29821 tgatatcgaa atcaacccgg cggatctgcg cattgacgtt tatcgcgcgt ccggcgcggg
    29881 cggtcagcac gttaaccgta ccgaatctgc ggtgcgtatt acccacatcc cgaccgggat
    29941 cgtgacccag tgccagaacg accgttccca gcacaagaat aaagaccagg ccatgaagca
    30001 gatgaaagcg aagctttatg aactggagat gcagaagaaa aatgctgaga aacaggcgat
    30061 ggaagataac aaatccgaca tcggctgggg cagccagatt cgttcttatg tccttgatga
    30121 ctcccgcatt aaagatctgc gcaccggggt tgaaacccgc aatacgcagg ccgtgctgga
    30181 cggcagcctg gatcaattta tcgaagcaag tttgaaagca gggttatgag gaaccaacat
    30241 gtctgaacaa cacgcacagg gcgctgacgc ggtagtcgat cttaacaatg aactgaaaac
    30301 gcgtcgtgag aagctggcga acctgcgtga gcagggaatt gccttcccga acgatttccg
    30361 tcgcgatcat acctctgacc aattgcacgc agaattcgac ggtaaagaga acgaagaact
    30421 ggaagcgctg aacatcgaag tcgccgttgc tggccgcatg atgacccgcc gtattatggg
    30481 taaagcctct tttgttaccc tgcaggacgt tggcggtcgt attcagctgt acgttgcccg
    30541 tgacgatctt ccggaaggcg tttacaacga gcagttcaaa aaatgggatc tcggcgacat
    30601 cctcggcgcg aaaggtaaac tgttcaaaac caaaaccggc gaactgtcta tccactgcac
    30661 cgagctgcgt ctgctgacca aagcactgcg tccgctgccg gacaaattcc acggcttgca
    30721 ggatcaggaa gcgcgctatc gtcagcgtta tctggatctc atctctaacg atgaatcccg
    30781 caacaccttt aaagtgcgtt cgcagatcct ctctggcatt cgccagttca tggtaaatcg
    30841 cggctttatg gaagttgaaa cgccgatgat gcaggtgatc ccaggcggtg ccgctgcgcg
    30901 tccgtttatc acccatcata acgcgctgga tcttgacatg tacctgcgta tcgcgccgga
    30961 actgtacctc aagcgtctgg tggtcggtgg cttcgagcgt gtattcgaaa tcaaccgtaa
    31021 cttccgtaac gaaggtattt ccgtacgtca taacccagag ttcaccatga tggaactcta
    31081 tatggcttac gcagattaca aagatctgat cgagctgacc gaatcgctgt tccgtactct
    31141 ggcacaggat attctcggta agacggaagt cacctacggc gacgtgacgc tggacttcgg
    31201 taaaccgttc gaaaaactga ccatgcgtga agcgatcaag aaatatcgcc cggaaaccga
    31261 catggcggat ctggacaact tcgactctgc aaaagcgatt gctgaatcta tcggcatcca
    31321 cgttgagaag agctggggtc tgggccgtat cgttaccgag atcttcgaag aagtggcaga
    31381 agcacatctg attcagccga ccttcattac tgaatatccg gcagaagttt ctccgctggc
    31441 gcgtcgtaac gacattaacc cggaaatcac agaccgcttt gagttcttca tcggtggtcg
    31501 tgaaatcggt aacggcttta gcgagctgaa tgacgcggaa gatcaggcgc agcgcttcct
    31561 ggatcaggtt gccgcgaaag acgcaggtga cgacgaagcg atgttctacg acgaagatta
    31621 cgtcaccgca ctggaacacg gcttaccgcc gacagcaggt ctgggaattg gtatcgaccg
    31681 tatggtaatg ctgttcacca acagccatac catccgcgac gttattctgt tcccggcgat
    31741 gcgtccagta aaataagcat tacgttatgc taataacccc ggcaaatgtc ggggtttttt
    31801 aattgtgctg cgcgaaagca gacaacaatt ttcttgcttc actattggct gcctgcatta
    31861 ccatccacgg actgaacgcc cacggcgtgg catcaatacc gtgtaataca tctgctaaat
    31921 cacaccattg ataatccatc acttcatcat cgttgatctg taacgcactg ttggtgcgtg
    31981 cggcaaatac cggacacact tcattttcca caatgccatt cggatcggtg gcgcgatagc
    32041 gaaagtcagg atagatagat tcaggaggcg taatttccac gccaagctca taacggcaac
    32101 ggcggatcac tgcgtcttcg ttgcgttctc ccagttgtgg gtgcccacaa accgagttag
    32161 tccacacgcc aggccatgct tttttgctca gtgcgcggcg ggtaactaat aattgcccct
    32221 tggcattaaa cagccaactg gagaacgcga gatgtaagag ggtgtctgcc gtgtgtgcgg
    32281 catacttttc cagcgtaccc gtgggaactc cctgtgcatt caataaaatg acgtgttccg
    32341 tttgcataat ttctcacatg taattctgat cactcatcat tatagataat tgaagagtga
    32401 aatgattaac caagtgagcg tttatcgaca accgcccgtt ttgagcggat gccgacaggt
    32461 aaaaaccatt taaaaaagta gcatcatata tttgaagcga ctttcaatgg ccattgcaac
    32521 acagtcagaa atgacaggaa tagagagagt aaaaagcaac agcagactga atatagcgcg
    32581 cattaaaaga tttatattat tctccatgct catttttctt cagct
//
LOCUS       DADMHC010000025        32432 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.025, whole genome shotgun sequence.
ACCESSION   DADMHC010000025 DADMHC010000000
VERSION     DADMHC010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 32432)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32432)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32432
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.025"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            197..991
                     /gene="panB"
                     /locus_tag="JNZ57_000941"
     CDS             197..991
                     /gene="panB"
                     /locus_tag="JNZ57_000941"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HAY8827246.1"
                     /translation="MKPTTIASLQKCKQDKKRFATITAYDYSFAKLFADEGLNVMLVG
                     DSLGMTVQGHDSTLPVTVADIAYHTASVRRGAPNCLLLADLPFMAYATPEQAFENAAT
                     VMRAGANMVKIEGGEWLVETVKMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAG
                     DQLLSDALALEAAGAQLLVLECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDA
                     FGITGGHIPKFAKNFLAETGDIRAAVRQYMAEVESGVYPGEEHSFH"
     gene            1003..1854
                     /gene="panC"
                     /locus_tag="JNZ57_000942"
     CDS             1003..1854
                     /gene="panC"
                     /locus_tag="JNZ57_000942"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HAY8827247.1"
                     /translation="MLIIETLPLLRQQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEA
                     KARADVVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKRKVDLVFAPSVKEIYPNG
                     TETHTYVDVPGLSTMLEGASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIR
                     KMVADMGFDIEIVGVPIMRAKDGLALSSRNGYLTAEQRKIAPGLYKVLSSIADKLQAG
                     ERDLDEIIAIAGQELNEKGFRADDIQIRDADTLLEVSETSKRAVILVAAWLGDARLID
                     NKIVELA"
     gene            complement(2146..3042)
                     /locus_tag="JNZ57_000943"
     CDS             complement(2146..3042)
                     /locus_tag="JNZ57_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HAY8827248.1"
                     /translation="MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTL
                     HLESGSFIEESLKGHSTDVLYSVQMQGNPGYLHVVIEHQSKPDKKMAFRMMRYSIAAM
                     HRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDIFYSPELARRVYNSPFPLVDITI
                     TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQR
                     GHTEQADLFYGVLRDRETGGESMMTLAQWFEEKGIEKGIQQGRQEERQEFAQRFLSKG
                     MSREDVAEMTNLSLAEIDRLIN"
     gene            3316..3696
                     /gene="panD"
                     /locus_tag="JNZ57_000944"
     CDS             3316..3696
                     /gene="panD"
                     /locus_tag="JNZ57_000944"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HAY8827249.1"
                     /translation="MIRTMLQGKLHRVKVTHADLHYEGSCAIDQDFLDAAGILENEAI
                     DIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWR
                     PNVAYFEGDNEMKRTAKAIPVQVA"
     gene            complement(3700..4539)
                     /locus_tag="JNZ57_000945"
     CDS             complement(3700..4539)
                     /locus_tag="JNZ57_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HAY8827250.1"
                     /translation="MRYPILHKLKDRLNQTWYQIRIGDRLAYISALDAQPDNGLPVLT
                     YHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMVQLEGYVKNKINLPAR
                     AVVITFDDGLKSVSRYAYPVLKQYGMKATAFIVTSRIKRHPQKWDPKSLQFMSVSELN
                     EIRDVFDFQLHTHFLHRVDGYRRPILLSRSEHNILFDFARSRRALAQFNPHVWYLSYP
                     FGGFNDKAVKAANDAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMSRLVSNQ
                     PQG"
     gene            complement(4517..4886)
                     /locus_tag="JNZ57_000946"
                     /pseudo
     CDS             complement(4517..4886)
                     /locus_tag="JNZ57_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004980383.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase"
     gene            complement(4981..5421)
                     /locus_tag="JNZ57_000947"
     CDS             complement(4981..5421)
                     /locus_tag="JNZ57_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HAY8827251.1"
                     /translation="MLGWVITCHDDRAQEILDALEKKHGALLQCRAVNFWRGLSSNML
                     SRMMCDALHEADSGEGVIFLTDIAGAPPYRVASLLSHKHSRCEVISGVTLPLIEQMMA
                     CRETMTSSEFRERIVELGAPEVSSLWHQQQKNPPFVLKHNLYEY"
     gene            complement(5526..6296)
                     /locus_tag="JNZ57_000948"
     CDS             complement(5526..6296)
                     /locus_tag="JNZ57_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY8827252.1"
                     /translation="MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGN
                     LIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPT
                     HVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLN
                     GVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGF
                     LGINDVPLATTFGVLVVFIVVFYLICWSLIQRGRGLRS"
     gene            complement(6293..7219)
                     /locus_tag="JNZ57_000949"
     CDS             complement(6293..7219)
                     /locus_tag="JNZ57_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY8827253.1"
                     /translation="MTIALELQQLKKTYLGGVQALRGIDLQVEAGDFYALLGPNGAGK
                     STTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQ
                     AGYYGVERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLIL
                     DEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENT
                     SMKALLAKLKSETFILDLAPKSPLPKLDGYQYRLVDTATLEVEVLREQGINSVFTQLS
                     EQGIQVLSMRNKANRLEELFVSLVNEKQGDRA"
     gene            7328..7990
                     /gene="can"
                     /locus_tag="JNZ57_000950"
     CDS             7328..7990
                     /gene="can"
                     /locus_tag="JNZ57_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonate dehydratase"
                     /protein_id="HAY8827254.1"
                     /translation="MKDIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPHFLWIGCSD
                     SRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCG
                     GVQAAVENPELGLINNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGH
                     STIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLKHAN
                     HK"
     gene            complement(8031..8567)
                     /gene="hpt"
                     /locus_tag="JNZ57_000951"
     CDS             complement(8031..8567)
                     /gene="hpt"
                     /locus_tag="JNZ57_000951"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308156.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HAY8827255.1"
                     /translation="MKHTVEVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRG
                     SFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDII
                     DSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDY
                     AQRYRHLPYIGKVILLDE"
     gene            8773..11061
                     /locus_tag="JNZ57_000952"
     CDS             8773..11061
                     /locus_tag="JNZ57_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone-dependent
                     dehydrogenase"
                     /protein_id="HAY8827256.1"
                     /translation="MAINNTGSRRLLVTLTVLFAALCGLYLLIGGGWLVAIGGSWYYP
                     IAGLVMLGVAWMLWRSKRAALWLYAALLLGTMIWGVWEVGFDFWALTPRSDILVFFGI
                     WLILPFVWRRLVIPASGAVAALVVALLISGSILTWAGFNDPQEINGTLSADATPAEAI
                     SPVADQDWPAYGRNQEGQRFSPLKQINADNVHNLKEAWVFRTGDVKQPNDPGEITNEV
                     TPIKVGDTLYLCTAHQRLFALDAASGKEKWHYDPKLKTNESFQHVTCRGVSYHEAKAE
                     TASPEVMADCPRRIILPVNDGRLIAINAENGKLCETFANKGVLNLQSNMPDTKPGLYE
                     PTSPPIITDKTIVMAGSVTDNFSTRETSGVIRGFDVNTGELLWAFDPGAKDPNAIPSD
                     EHTFTFNSPNSWAPAAYDATLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNATT
                     GKLAWSYQTVHHDLWDMDLPAQPTLADITVNGQKVPVIYAPAKTGNIFVLDRRNGELV
                     VPAPEKPVPQGAAKGDYVTPTQPFSELSFRPKKDLSGADMWGATMFDQLVCRVMFHQM
                     RYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPNREVAIANPMALPFVSKLIPRGPGN
                     PMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPFGLPCKQPAWGYISALDLKTNEV
                     VWKKRIGTPQDSMPMLGGPISTAGNVLFIAATADNYLRAYNMSNGEKLWQGRLPAGGQ
                     ATPMTYEVNGKQYVVISAGGHG"
     gene            complement(11168..12718)
                     /gene="cueO"
                     /locus_tag="JNZ57_000953"
     CDS             complement(11168..12718)
                     /gene="cueO"
                     /locus_tag="JNZ57_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase CueO"
                     /protein_id="HAY8827257.1"
                     /translation="MQRRDFLKYSVALGVASALPLWSRAVFAAERPTLPIPDLLTTDA
                     RNRIQLTIGAGQSTFGEKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHW
                     HGLEVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLV
                     VIEDDEILKLMLPKQWGIDDVPVIVQDKKFNADGQIDYQLDVMTAAVGWFGDTLLTNG
                     AIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVL
                     MGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL
                     SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGN
                     MNHMNHGGKFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGT
                     QFRILSENGKPPAAHRAGWKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDT
                     GMMLGFTV"
     gene            12884..13231
                     /locus_tag="JNZ57_000954"
     CDS             12884..13231
                     /locus_tag="JNZ57_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacC family pilotin-like protein"
                     /protein_id="HAY8827258.1"
                     /translation="MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKND
                     CGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKA
                     LARDSLSLLAYVK"
     gene            13337..14203
                     /gene="speE"
                     /locus_tag="JNZ57_000955"
     CDS             13337..14203
                     /gene="speE"
                     /locus_tag="JNZ57_000955"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HAY8827259.1"
                     /translation="MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFG
                     RVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVE
                     SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCT
                     DPIGPGESLFTSAFYEGCKRCLNPSGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGF
                     YQTAIPTYYGGIMTFAWATDNDALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALP
                     QYLQDALASQPS"
     gene            14219..15013
                     /gene="speD"
                     /locus_tag="JNZ57_000956"
     CDS             14219..15013
                     /gene="speD"
                     /locus_tag="JNZ57_000956"
                     /EC_number="4.1.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine decarboxylase"
                     /protein_id="HAY8827260.1"
                     /translation="MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYN
                     ANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLP
                     ETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDI
                     VTIDYRVRGFTRDINGMKHFIDHEINSIQNFMSDDMKALYDMVDVNVYQENIFHTKML
                     LKEFDLKHYMFHTKPEDLTDSERQEITAALWKEMREIYYGRNMPAV"
     gene            complement(15050..15412)
                     /locus_tag="JNZ57_000957"
     CDS             complement(15050..15412)
                     /locus_tag="JNZ57_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414661.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacL family protein"
                     /protein_id="HAY8827261.1"
                     /translation="MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQ
                     AAHALKGSERSWQRAGHEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCG
                     VEDFLQVVAAYRNFVQQK"
     gene            complement(15587..18184)
                     /gene="acnB"
                     /locus_tag="JNZ57_000958"
     CDS             complement(15587..18184)
                     /gene="acnB"
                     /locus_tag="JNZ57_000958"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HAY8827262.1"
                     /translation="MLEEYRKHVAERAAEGIAPKPLDANQMAALVELLKNPPAGEEEF
                     LLDLLTNRVPPGVDEAAYVKAGFLAAIAKGEAKSPLLTPEKAIELLGTMQGGYNIHPL
                     IDALDDAKLAPIAAKALSHTLLIFDNFYDVEEKAKAGNEYAKQVMQSWADAEWFLNRP
                     ALAEKLTVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGVVG
                     PIKQIEALQQKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGG
                     KIAPIFFNTMEDAGALPIEVDVSNLNMGDVIDVYPYKGEVRNHETGELLATFELKTDV
                     LIDEVRAGGRIPLIIGRGLTTKAREALGLPHSDVFRQAKDVAESDRGFSLAQKMVGRA
                     CGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPK
                     PVDVNTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISF
                     PAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVE
                     KKGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYLNSNI
                     VLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEADADAEYAAVIDIDLADIKEPIL
                     CAPNDPDDARPLSAVQGEKIDEVFIGSCMTNIGHFRAAGKLLDAHKGQLPTRLWVAPP
                     TRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADGATVVSTSTRNFPNRLG
                     TGANVFLASAELAAVAALIGKLPTPEEYQTYVAQVDKTAVDTYRYLNFNQLSQYTEKA
                     DGVIFQTAV"
     gene            18539..20392
                     /locus_tag="JNZ57_000959"
     CDS             18539..20392
                     /locus_tag="JNZ57_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3300 domain-containing protein"
                     /protein_id="HAY8827263.1"
                     /translation="MKMTLPFKPHVLALICSAGLCAASAGLYIKSRTVEAAVETQSTQ
                     LAVSDAAAVTLPATVSAPPVTPAVVKSAFSTAQIDQWVAPVALYPDALLSQVLMASTY
                     PANVAQAVQWSHDNPLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNL
                     GDAFLAQPQDVMDSVQRLRQLAQQTGSLKSSNEQKVITTTKKAVPVKQTVTAPVIPSN
                     TVLTASPVITEPATTVISIEPANPDVVYIPNYNPTVVYGNWANTAYPPVYLPPPAGEP
                     FIDSFVRGFGYSMGVATTYALFSSIDWDDDDHDHHHHDDDDYHHHDGGHRDGNGWQHN
                     GDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRNGVPYHDQDMAKRFHQTDVNGGMSA
                     TQLPAPTRDSQRQAAASQFQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFRDFS
                     RRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPQIQQRREAARERIQPASPEQRQ
                     AVREKMQTNPQIQQRRDAARERIQSASPEQRQVFKEKVQQRPLNQQQRDNARQRVQSA
                     SPEQRQVFRERVQESRPQRLNDSNRTARLNNDQRSAVRERLSERGARRLER"
     gene            complement(20463..21887)
                     /gene="lpdA"
                     /locus_tag="JNZ57_000960"
     CDS             complement(20463..21887)
                     /gene="lpdA"
                     /locus_tag="JNZ57_000960"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HAY8827264.1"
                     /translation="MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGV
                     CLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLA
                     GMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDP
                     RIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDI
                     VKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPN
                     GKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEV
                     IAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASDC
                     ADGMTKLIFDKESHRVIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHE
                     SVGLAAEVFEGSITDLPNPKAKKK"
     gene            complement(22212..24104)
                     /gene="aceF"
                     /locus_tag="JNZ57_000961"
     CDS             complement(22212..24104)
                     /gene="aceF"
                     /locus_tag="JNZ57_000961"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex
                     dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HAY8827265.1"
                     /translation="MAIEIKVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASM
                     EVPSPQAGIVKEIKVSVGDKTQTGALIMIFDSADGAADAAPAQAEEKKEAAPAAAPAA
                     AAAKDVNVPDIGSDEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEI
                     KVNVGDKVSTGSLIMVFEVAGEAGAAAPAAKQEAAPAAAPAPAAGVKEVNVPDIGGDE
                     VEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIM
                     IFEVEGAAPAAAPAKQEAAAPAPAAKAEAPAAAPAAKAEGKSEFAENDAYVHATPLIR
                     RLAREFGVNLAKVKGTGRKGRILREDVQAYVKEAIKRAEAAPAATGGGIPGMLPWPKV
                     DFSKFGEIEEVELGRIQKISGANLSRNWVMIPHVTHFDKTDITELEAFRKQQNEEAAK
                     RKLDVKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPNGLVV
                     PVFKDVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVN
                     APEVAILGVSKSAMEPVWNGKEFVPRLMLPISLSFDHRVIDGADGARFITIINNTLSD
                     IRRLVM"
     gene            complement(24119..26782)
                     /gene="aceE"
                     /locus_tag="JNZ57_000962"
     CDS             complement(24119..26782)
                     /gene="aceE"
                     /locus_tag="JNZ57_000962"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HAY8827266.1"
                     /translation="MSERFPNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLAEA
                     RKGGVNVAAGTGISNYINTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDL
                     ELGGHMASFQSSATIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQ
                     EQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLK
                     DTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKII
                     NELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYV
                     REHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQETKGKATVILAHSI
                     KGYGMGDAAEGKNIAHQVKKMNMDGVRHIRDRFNVPVSDADIEKLPYITFPEGSEEHT
                     YLHAQRQKLHGYLPSRQPNFTEKLELPSLQDFGALLEEQSKEISTTIAFVRALNVMLK
                     NKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQIL
                     QEGINELGAGCSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFL
                     IGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEK
                     QENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETIEGSKGKVQLLGSGSILRHVR
                     EAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMNDAPA
                     VASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGE
                     LAKRGEIDKKVVADAIAKFNIDADKVNPRLA"
     gene            complement(26943..27707)
                     /gene="pdhR"
                     /locus_tag="JNZ57_000963"
     CDS             complement(26943..27707)
                     /gene="pdhR"
                     /locus_tag="JNZ57_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex transcriptional
                     repressor PdhR"
                     /protein_id="HAY8827267.1"
                     /translation="MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQF
                     DVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLE
                     TRHALEGIAAYYAALRSTDEDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEA
                     AHNVVLLHLLRCMEPMLAQNVRQNFELLYSRREMLPLVSSHRTRIFEAIMAGKPEEAR
                     EASHRHLAFIEEILLDRSREESRRERSLRRLEQRKN"
     gene            28248..29621
                     /gene="aroP"
                     /locus_tag="JNZ57_000964"
     CDS             28248..29621
                     /gene="aroP"
                     /locus_tag="JNZ57_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transporter AroP"
                     /protein_id="HAY8827268.1"
                     /translation="MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSA
                     GPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVL
                     YVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIK
                     VIAVVAMIIFGGWLLFSGNSGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLE
                     LVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIF
                     HELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPV
                     NTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQG
                     VVTRFPALLYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKT
                     AKAVKAH"
     gene            complement(29664..30518)
                     /gene="ampE"
                     /locus_tag="JNZ57_000965"
     CDS             complement(29664..30518)
                     /gene="ampE"
                     /locus_tag="JNZ57_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase regulator AmpE"
                     /protein_id="HAY8827269.1"
                     /translation="MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTL
                     GMTIIAMGVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRND
                     SHARVTMAGELTMINGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGIWGPV
                     TLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKAL
                     PAWFASLGDFHTSQYQVLTRLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIAL
                     LTIYGALV"
     gene            complement(30515..31066)
                     /gene="ampD"
                     /locus_tag="JNZ57_000966"
     CDS             complement(30515..31066)
                     /gene="ampD"
                     /locus_tag="JNZ57_000966"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HAY8827270.1"
                     /translation="MLLEQGGLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFG
                     GPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQY
                     QGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDRYPDIANNMTGHCDIAPD
                     RKTDPGPAFDWARFRALVSKETT"
     gene            31154..32047
                     /gene="nadC"
                     /locus_tag="JNZ57_000967"
     CDS             31154..32047
                     /gene="nadC"
                     /locus_tag="JNZ57_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HAY8827271.1"
                     /translation="MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANND
                     ITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQ
                     PLFELEGPSRVLLTGERTALNFVQTLSGAASKVRHYVELLEGTNTQLLDTRKTLPGLR
                     SALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVEN
                     LEELDEALKAGADIIMLDNFETEQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVD
                     FISVGALTKHVQALDLSMRFR"
     gene            32250..>32432
                     /locus_tag="JNZ57_000968"
     CDS             32250..>32432
                     /locus_tag="JNZ57_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HAY8827272.1"
                     /translation="MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQ
                     TFVPYRTAVELCALEHG"
BASE COUNT         7826 a         8812 c         7988 g         7806 t
ORIGIN      
        1 gccacgctac aacaggatgg aactatacca atagaagctg gtgagtttaa agccaccagt
       61 actttccagg taacctaccc ttaataagtc caccgcaccg ccatcatctg gcggtgcggt
      121 aattgataaa tcattgcccc caccaatgtg actgataaaa tgccaggcaa cacgacatca
      181 tttatcagga cacgttatga aaccgaccac cattgcttca cttcagaaat gtaagcagga
      241 taaaaagcgt ttcgcgacca tcaccgctta cgactacagc ttcgcgaaac tatttgctga
      301 tgaaggactt aacgtcatgc tggtaggcga ctcgctgggc atgacggttc agggtcacga
      361 ctccaccctg ccggtgaccg ttgccgatat cgcctaccac actgcctccg tacgtcgtgg
      421 tgcgccaaac tgcctgctgt tggctgacct gccgtttatg gcgtatgcca cgccggaaca
      481 agcctttgaa aacgccgcaa cggttatgcg tgccggtgcc aatatggtca aaattgaggg
      541 cggtgagtgg ctggtcgaaa ccgtaaaaat gctgaccgaa cgtgccgttc ctgtatgtgg
      601 tcacttaggt ttaaccccac agtcagtgaa tattttcggt ggctacaaag ttcaggggcg
      661 cggcgatgaa gcgggcgatc aactgctcag cgatgcatta gccttagaag ccgctggggc
      721 acagctgctg gtgctggaat gcgtgccggt tgaactggca aaacgtatta ccgaagcact
      781 ggcgatcccg gttattggca ttggcgcagg caacgtcact gacgggcaga tcctcgtgat
      841 gcacgacgcc ttcggcatta ccggcggtca cattcctaaa ttcgctaaaa atttcctcgc
      901 cgaaacgggc gacatccgcg cggctgtgcg gcagtatatg gctgaagtgg agtccggcgt
      961 ttatccgggc gaagaacaca gtttccatta aggagtcacg ttgtgttaat tatcgaaacc
     1021 ctgccgctgc tgcgtcagca aattcgccgc ctgcgtatgg aaggcaagcg cgtggcgctg
     1081 gtgcctacta tgggtaatct gcacgatggc catatgaagc tggtcgacga agccaaagcc
     1141 cgcgccgatg tggtcgtcgt cagtattttc gttaacccga tgcagttcga ccgcccggaa
     1201 gatctggcac gttatccacg gaccttgcag gaggactgcg agaagctaaa caaacgtaaa
     1261 gtggatttag ttttcgcccc ttcggtaaaa gagatctacc cgaacggtac tgaaacccat
     1321 acttacgttg acgttcccgg gctttcgacc atgctggaag gcgcgagccg tccggggcat
     1381 tttcgcggcg tttcgactat cgtcagcaag ctgtttaacc tggtccagcc ggacatcgcc
     1441 tgcttcggtg aaaaggactt tcagcaactg gcgctaatcc gcaaaatggt tgccgatatg
     1501 ggcttcgata ttgaaattgt cggcgtcccg attatgcgcg ccaaagatgg ccttgcgctc
     1561 agttcccgta atggttatct gacggcggaa caacgcaaaa ttgcgcccgg tctgtacaaa
     1621 gttttaagtt caattgccga caaattgcag gctggcgagc gggatcttga tgaaattatt
     1681 gccattgcag ggcaagaact gaatgaaaaa ggcttccgcg ccgatgatat tcagattcgc
     1741 gatgccgaca cgttgctgga agtctctgaa accagcaaac gagctgtaat tctggtagcc
     1801 gcctggcttg gcgatgcccg cctgatcgac aacaaaatcg tcgaactggc gtaatgcttt
     1861 tactctaaat aattcaagtt gcaggaaggt ggcaagcgag tgacaaattc gtcaggaacg
     1921 aatttgccca gccgcaggct ggccttcggt gagagacatg gatgtctctc attaatcccc
     1981 aggagcttac ataagtaagt gactggggtt agcgaacgca gacacagcac atgcaattta
     2041 aagtatgacg agtataactg gcgctacggc tgatggcgcc aattattaat ttgccccacg
     2101 tcatggcgat ggcgtctgta agcaattatt cataacgcag acaacttagt taatcagcct
     2161 atcaatctca gcaagagata aatttgtcat ctctgcaacg tcttcccgag acatcccttt
     2221 actcagaaaa cgctgggcga attcttgcct ttcctcctgt cttccctgct gaatcccctt
     2281 ctcaatccct ttctcttcaa accactgcgc cagcgtcatc atagactccc ctcccgtttc
     2341 cctgtctctc agcacaccat aaaacaaatc cgcttgttca gtatgaccgc gttgcagcat
     2401 atagttttgc atggcaacta actgacttcc gctagtgtac ccttcgtcaa tcagcgtgac
     2461 cagttgctcc agcaataaca ttaagtcgcg ctggcgaata tgtttttgca gtagttcgag
     2521 aatcgcaatc cgccgatgtt gcatgatttc gtcatccggt gtgatggtga tatccaccag
     2581 cgggaaagga ctgttataga cgcgtcgtgc cagctccggc gagtaaaata tatcaaacca
     2641 gcacattgag agcggataag gtgtggcctc gccctgataa aacagtatcg gcaccaccag
     2701 cggcagctta tcgtgatccg cctccagatg ccggtgcatg gcagcaatag aataacgcat
     2761 catgcgaaag gccattttct tatccggctt gctttggtgt tcaatcacaa catgcagata
     2821 accgggattg ccctgcattt gcacggaata gagcacgtcc gtgctgtgtc ctttcaggct
     2881 ctcttcaatg aaactccccg actctaaatg aagcgtgttg aggtcacaaa gttctcgtaa
     2941 ttccactggc aaatgtatct ccagaaagtc gcgagccgtc tccgcgtgca ttaaaaattg
     3001 tttaaacact gcatcatgcg gtgtggtact cggtgcatcc atcttccctg ccttccgtgt
     3061 tgtcttgcgt gaaggcagta tccagtcaag gcgtgccatc gtcagccacc tctttagtat
     3121 ttaccgagca gcgttcagag aaatttcaat tggttacagc cgttacatgg cacgcttcgg
     3181 cacggtacgc aaactgctga tgtaaatgcc gtcagatgag tagacactaa acaaaaatcg
     3241 ggcaatactg cgtgagaatt tcctcaaagc aggcatcgcc tgcttcgtta acgacagggt
     3301 agaaaggtag aagttatgat tcgcacgatg ctgcagggca aactccaccg cgtgaaagtg
     3361 actcatgcgg acctgcacta tgaaggttct tgcgccattg accaggattt tcttgacgca
     3421 gccggtattc tcgaaaacga agccattgat atctggaatg tcaccaacgg caagcgtttc
     3481 tccacttatg ccatcgcggc agaacgcggt tcgagaatta tttctgttaa cggtgcggcg
     3541 gcccactgcg ccagtgtcgg cgatattgtc atcatcgcca gcttcgttac catgccagat
     3601 gaagaagctc gcacctggcg acccaacgtc gcctattttg aaggcgacaa tgaaatgaaa
     3661 cgtaccgcga aagcgattcc ggtacaggtt gcttgattgt tatccctgcg gctggttact
     3721 caccagccgc gacatcgtct ccagcgaatc cgttcttaag atataaagtc gttttagtaa
     3781 caacggatta tcccccggtt ttactttgcc tttcatggtt gtcaccgcca ggtgaaatcc
     3841 ggcatcgttt gctgccttca cggctttgtc attaaatccg ccaaacggat acgaaagata
     3901 ccagacatgc ggattaaatt gcgccagagc gcggcgtgaa cgtgcaaaat caaacagaat
     3961 attgtgttca ctacggctca gtaatatggg gcggcgataa ccatccaccc gatgcaaaaa
     4021 atgggtatgt aactggaaat caaaaacatc gcgaatttcg ttaagttcag aaacgctcat
     4081 aaattgcagc gattttgggt cccacttctg cgggtgacgt ttgatgcgcg aggtaacaat
     4141 aaacgccgtc gccttcatgc catattgttt caacacggga tacgcatagc ggctcaccga
     4201 tttgaggcca tcatcaaagg taatcaccac cgctcgcgca gggagattga tcttattctt
     4261 cacgtaacct tccagctgca ccatgctcag tgtcgcgtat cccctgtcgc gcagccaggc
     4321 catctggtta ttgaaagcgc gtactgaggt ggtcgtcgaa gtatggcgaa aacgggtgtt
     4381 ttcttcatcg cgcagaatat ggtgataggt tagcaccggc aggccattat cgggttgggc
     4441 atccagcgcg ctgatatagg ccagtcgatc gccaatacgg atctgatacc aggtttgatt
     4501 taacctgtct ttcagtttat gcaaaatcgg gtagcgcaaa ttgtccgcca gtaccccaaa
     4561 gcactcggcg cgttatagac cggcgtatct ttccaggtaa ttaagttctg attactcagc
     4621 ggcttgttga ggtcacccaa accgtcttca actttttgtc gcccctgaac tggctcgaga
     4681 tgccctttat cgataaaccc tttaccaaag ccaaaattaa atgcgtaata acttgcggca
     4741 gtgggctcca cggcaatgat ttgcccggcc cgaatattcc ccacggtcac catcttgtcg
     4801 ccaatttgcg cccagatcgc agcattttcg atggtttgca tataacgggc aggtaacgcg
     4861 gcactaacgc ttgcggtaaa cagcatcagc aggatgaata acagcttgtt tatacatgaa
     4921 aaaataaccg agggtgaaac aacgcttgta ttgtagcaaa agcgccatca gaatcgcggg
     4981 ttaatactca tacaaattat gtttgaggac aaaaggcgga tttttttgtt gttggtgcca
     5041 aagactactc acctccggcg cacccagttc gacaatacgc tcgcgaaact ctgaactggt
     5101 catggtttca cggcaagcca tcatctgttc aattaacggt aacgtgacac cagaaatcac
     5161 ttcacaacgg gagtgtttat ggcttaataa tgaagccacg cggtacggtg gcgctccggc
     5221 tatatcggtt aagaagatga caccctcacc agagtccgct tcatgcagag catcgcacat
     5281 catgcggctg agcatattag agcttaatcc gcgccagaaa ttcacggccc ggcactgaag
     5341 aagtgcccca tgttttttct ccagcgcatc cagtatctct tgcgcccggt catcgtgaca
     5401 ggtaattacc caacctaaca tcgccttcct ccttagccga aaatcagtct atcctgacca
     5461 ttgttgataa agggtgatag ccgtcaaaac tcctctcccc cgaatccaga ggagaggaaa
     5521 tagccttagc tacgcaaacc acgtccacgt tggatcagcg accaacagat caaataaaac
     5581 accacaataa agaccaccag tacgccaaag gtagtggcca gcggcacatc atttataccg
     5641 aggaagccgt agcggaaacc actgatcata taaacgattg ggttcaggtg cgacagccct
     5701 tgccagaacg gcggcaacaa agtcagggag taaaacaccc cgcccaaata cgtgagtggc
     5761 gttaacacaa aggttggcac caggctgatg tcatcgaacg ttttggcaaa cacgccgttc
     5821 agcaaacccg caagggagaa tagcaccgcc gtgagcacca gggttaaggc aacgaatacc
     5881 cacgaatgca cctgaaacgg cacaaaaaac agtgaaattg ccgtcaccag aatgccaaca
     5941 aacagaccac gcgccacgcc accgccgaca tatccggcaa taatgacgtg agtcggaacc
     6001 ggcgctacca gcagctcttc aatattacgc tggaacttgg caccaaaaaa tgatgacgcg
     6061 acgttagcgt aggcattggt gatcaccgac atcatgatca gccccggtac gatgaactgc
     6121 atatagctga agccatgcat atcgccaata cgcgaaccta tcaggttacc gaagataata
     6181 aagtaaaggg tcatggtgat gactggcggc accagcgtct gcacccagat acgcataaag
     6241 cgatggatct ctttcgccca gatgcttttt agcgccaccc agtaaagatg catcatgcgc
     6301 gatctccttg tttttcatta accagtgaaa caaacagctc ttccagacgg ttagctttgt
     6361 tacgcatact taatacctga atgccctgct cacttaactg cgtaaatacg ctgttgatcc
     6421 cctgctcacg cagcacttca acttccagcg tcgcggtatc gaccagtcga tactgatagc
     6481 catcgagctt cggtaacggg cttttcggtg cgagatcgag aataaaggtt tccgatttca
     6541 gcttcgccag cagcgccttc atcgaggtat tttccaccag ctcaccgtgt tgaataatgc
     6601 cgatattgcg gcacagcatt tctgcttctt ccaggtagtg tgtagtgaga atgatggtgg
     6661 tgcctttgtc gtttaaatcc ttcaaaaagc cccacattga gcggcgaagt tcaatatcca
     6721 cgcctgcggt cggttcgtcg agaatcagta gtttaggttc atgcattaac gcacgggcaa
     6781 tcattaaacg gcgcttcatc ccgccagata acatacgcgc acgttcgttg cgttttcccc
     6841 ataaatcgag ttgtttgaga tatttttcgc tgcggatgta cgcttctttg cgctccacgc
     6901 cgtagtaccc tgcctgattc accacaattt gctgcacggt ttcaaacggg ttgaagttaa
     6961 attcctgcgg caccagtccc aactgacgtt tagcgttcac gacatccttc tcgagatcgt
     7021 aaccaaatac gctgacccgc ccggaggttt tatttaccag agagctgata ataccgatag
     7081 tggtcgattt cccggccccg ttcggcccga gaagcgcata aaaatcaccc gcttcgacct
     7141 gcaaatctat tccacgaagc gcctgaacgc cgcctagata ggttttttta agctgttgaa
     7201 gttccagtgc aatggtcata aatttttact taccttacgt tcttacactt tatctgtggt
     7261 ttaaatcgtc ccggagttgc cctatattag ccaaacgtaa ttatttggtt acaggtcgtt
     7321 aacctccatg aaagacatag atacactcat cagcaacaat gcactatggt caaaaatgct
     7381 ggtggaagag gatcccgggt tttttgagaa actggcacaa gcgcaaaaac cgcactttct
     7441 atggattgga tgttccgaca gtcgcgttcc tgcagaacgt ttaaccggtc ttgagccggg
     7501 cgaactcttt gttcaccgta atgttgctaa cctggtcatt cacaccgacc tgaactgcct
     7561 ttccgtggtt cagtatgcag tggatgtact agaagttgaa cacattatta tctgtggcca
     7621 ctacggttgc ggcggcgtac aagccgcagt tgaaaacccg gaactggggc ttatcaacaa
     7681 ctggctgctg catatccgcg atatctggtt caaacatagc tcattgctcg gcgaaatgcc
     7741 gcaagagcgc cgtctggata ccttgtgtga actgaacgtc atggaacagg tgtataacct
     7801 aggccactcc accattatgc aatcagcgtg gaaacgcggg cagaaagtta ccattcacgg
     7861 ctgggcctat ggcattcacg acggcttgct gcgtgatctg gatgttactg ccaccaaccg
     7921 cgaaaccctt gagcaacgtt accgtcacgg gatttccaac ctcaagctga aacacgccaa
     7981 ccacaaataa aaatgccatg ccggatgcaa cacatccggc aacttcacac ttactcgtcc
     8041 agcagaatca ctttgccgat atacggcaga tgacggtaac gctgtgcgta atcaatgccg
     8101 taacccacca caaactcatc cgggatcgag aaaccgataa attctaccgg gacgttcact
     8161 tcacgacggg acggtttatc cagcagcgta caaatcgcca gcgacttcgg ttcgcgcagg
     8221 cttaagatct cacgcacttt cgacagtgta ttccccgagt cgatgatatc ttcaacaatc
     8281 agcacgtcct tgccacggat atcttcatcc agatctttga ggattttcac atcacgggtg
     8341 gtggacatgc cgctaccgta gctggaggcg gtcataaagt cgacttcatg agatacctga
     8401 acttcacggc acaggtccgc cataaacata aatgagccac gcagcagacc caccagcacc
     8461 atatcgctgc cgctgtcttt gtaacgctca gtaatctgac gacccagttc ggcgatacgc
     8521 gctttaatct ccgcttcggg gatcattact tctacagtat gtttcatatc tctaaccata
     8581 tgatttaaaa acaaatcact tcgcacgggc aggttttggc accgcaacaa agcgcaagac
     8641 acgcagtata ccagtaaaac tattcattcg cggaatctgt taataaagct cgaattgtga
     8701 tgacgatcac acatgttaaa acctataatt aattgctact aaaatattaa tgaattgaaa
     8761 tggtgtctct ttatggcaat taacaataca ggctcgcgac gattactcgt cacgctaaca
     8821 gtcctttttg cagcgctttg cgggctgtat ctactcattg gcggaggctg gctggtcgcg
     8881 attggcggct cctggtacta ccctatcgct ggccttgtga tgctcggcgt cgcctggatg
     8941 ctgtggcgca gtaaacgtgc cgcgctttgg ctatacgccg ccctgctgct cggcaccatg
     9001 atttggggcg tctgggaagt tggtttcgac ttctgggcgc tgactccgcg cagcgatatt
     9061 ctggtcttct tcggcatctg gctgatcctg ccgtttgtct ggcgtcgcct ggtcattcct
     9121 gccagcggcg cagttgccgc actggtggtg gcactgctga ttagcggtag tatcctgacc
     9181 tgggccggat ttaacgatcc gcaggaaatc aacggcacct taagcgccga tgccacacct
     9241 gcggaagcta tctcacccgt tgccgatcag gactggcctg cctatggtcg caatcaggaa
     9301 ggtcaacgct tttcacctct gaaacaaatt aacgccgata acgtccataa tctgaaagaa
     9361 gcctgggtgt tccgtactgg cgatgtgaag cagcctaacg atccgggcga aatcaccaat
     9421 gaagtgacgc cgattaaagt gggcgacacc ctttacctgt gtaccgctca ccagcgcctg
     9481 tttgcgctcg atgccgccag cggcaaagag aaatggcatt acgatcctaa gctgaaaact
     9541 aacgagtctt tccagcacgt aacctgccgt ggcgtctctt atcatgaagc caaagcagaa
     9601 acggcttcgc cggaagtgat ggcggattgc ccgcgtcgta tcattcttcc ggtcaatgat
     9661 ggtcgactga ttgcgattaa cgctgaaaac ggcaaactgt gcgaaacctt cgccaataaa
     9721 ggcgtgctca atctgcaaag caatatgcca gacaccaaac cgggtctgta tgaaccgact
     9781 tcgccaccga ttatcaccga taaaaccatc gtgatggcag gttcagttac cgataacttc
     9841 tcaacccgcg aaacgtctgg cgtgatccgt ggttttgatg tcaacaccgg ggagctgctg
     9901 tgggcttttg atcccggcgc gaaagatccg aacgcaatcc cgtctgacga acacaccttt
     9961 acctttaact cgccaaactc ctgggcacca gcggcctatg acgcgacgct ggatctggtc
    10021 tatctgccga tgggcgtgac cacgccggat atctggggcg gtaaccgcac accggaacag
    10081 gaacgttatg ccagctcgat tctggcgctg aatgccacta ccgggaaact ggcgtggagc
    10141 taccagaccg ttcaccacga cctgtgggac atggatcttc cggcacagcc gacgctggcg
    10201 gacatcaccg ttaatggtca gaaagtgccg gttatttacg ctccggcgaa aaccggcaac
    10261 atttttgtgc tcgatcgtcg caatggcgaa ctggtggttc cggccccgga aaaaccggtg
    10321 ccgcaaggtg ctgcgaaagg cgattacgtt actccgaccc agccgttctc tgaactgagc
    10381 ttccgtccga agaaagattt gagcggtgcg gatatgtggg gagccaccat gtttgaccaa
    10441 ctggtgtgcc gcgtgatgtt ccaccagatg cgctatgaag gcattttcac gccgccatct
    10501 gaacagggca cgctggtctt cccgggtaac ctgggaatgt ttgaatgggg cgggatttcc
    10561 gttgatccaa atcgtgaagt ggcaattgcc aacccaatgg cactgccgtt tgtttcgaaa
    10621 ctgatcccac gcggtccggg taacccgatg gagcagccga aagatgccaa aggcacgggt
    10681 acggaatccg gcattcagcc acagtacggt gtaccgtatg gtgtcacgct caacccgttc
    10741 ctctcaccgt ttggtctgcc gtgtaaacag ccagcatggg gttatatctc ggcgctggat
    10801 ctgaaaacca atgaagtggt gtggaagaaa cgtattggta cgccgcagga cagtatgccg
    10861 atgctgggcg ggccaatctc cacggcgggt aacgtgctgt ttatcgccgc tacggcagat
    10921 aactacctgc gcgcttacaa catgagcaac ggtgaaaaac tgtggcaggg tcgtttacca
    10981 gcgggtggtc aggcgacgcc aatgacctat gaagtgaatg gtaagcagta tgtggtgatc
    11041 tccgcaggcg gtcacggtta atttggtacg aagatgggcg actatattgt ggcttatgcc
    11101 ctgccggatg atgtgaaata accataatgc ccggagagat ccgggcatat ttccgaatac
    11161 ggtcttttta taccgtaaac cctaacatca tccccgtatc ttcatgctcc agcagatggc
    11221 agtgcgccat ataagcatgt tctttcggtg cgtcgtgatt aaacttcacc agcacttcac
    11281 tgacattgcc ttctacctta acggtatctt tccagcccgc gcgatgagcc gctggcggtt
    11341 tgccattttc tgacaagata cggaactgcg tgccgtgaat atggaacgga tgcagcatca
    11401 tgtcgcccac gccagagata acccaacgtt cgtactgccc tttcgccgcc gcaaacatcg
    11461 gcttattcat atcaaacgcc tgaccgttga ttttattggc atggtggaaa tcgaacttcc
    11521 cgccgtggtt catatgattc atattaccgt gccccatatg gcccatcatc tggctgtgat
    11581 ccattccggc catcgcctga tcgccatatt tctccattag catctgcata cccatcatat
    11641 cgagcatcgg gtccatagaa agttgcagct tgcgtaccgt cagcccttcc agcgaaggta
    11701 acgcaggcag gctacttaat gtgtctggca aagcaccgga ggcactaata gcaatcggct
    11761 gaatccgcat taccggatgc ggcttgtcaa acggcgcaat cgccatcccc atctggctga
    11821 ccggtagcgt caccaggtca aagggtttgt tgtcgttaac ctccaccagc acttcaaaac
    11881 gctcgcccat cagcaccggc agctcgctca ccttcaccgg ttcaggtagc agaccaccgt
    11941 cgctggcaat cacatacagc gggcgattgt cgctggtggc gaaattgagc gagcgggcat
    12001 tacagccatt gagcaaacgc aggcgcagcc aaccacgcgg ggcagcgtgt tgtgggtaga
    12061 ttgcaccgtt ggtcagcagc gtatcgccaa accagcccac ggcggcggtc atcacatcca
    12121 gttgataatc aatctgccca tcagcgttaa attttttatc ctgaacaatc accggaacat
    12181 catcgatacc ccactgtttt ggcagcatta atttcaggat ctcgtcatct tcaattacca
    12241 ccagcccagc caaccccatc gccacctgtc gcccagtctt gccatgttga tgtggatgga
    12301 accagcaagt agcggcaggt tgatcaacgt tcaacgtcac cgagcgcttg ccacctggcg
    12361 gaataattcc ctgcgggccg ccgtcgactt cacccggtac ttccagcccg tgccagtgca
    12421 acgtcgtctc ttccgtcagt tggttataga tatcaaccgt taccgctttg ccgcgctgta
    12481 atttcaccgc cggccccagc agattgccgt tatagcccca ggtagttgca gttttctcgc
    12541 caaaggtaga ctgacctgcg ccaatagtta actgaatgcg attacgggca tcggtcgtga
    12601 gcaaatcagg gatcggtaac gttgggcgtt ccgccgcaaa gactgcgcgg ctccacagcg
    12661 gcaaggctga agccacaccc agcgcgacgg aatattttaa gaaatcacga cgttgcatag
    12721 ttatttcctt attcttaagc aggcgaaaca aaatcaaacg ttgagcatag tccttcccct
    12781 tacgggaagg tcaagccgca gacacaattt aatcgacaat aatggtcgtc gcctcgctcg
    12841 cagtgtgcta acgtttatct tctttaagcc cctggtagaa gcaatgaaga cgtttttcag
    12901 aacagtgtta ttcggcagcc tgatggccgt ttgcgcaaac agttacgcgc tcagcgagtc
    12961 tgaagccgaa gatatggccg atttaacggc agtttttgtc tttctgaaga acgattgtgg
    13021 ttaccagaac ttacctaacg ggcaaattcg tcgcgcactg gtctttttcg cccagcaaaa
    13081 ccagtgggat ctcagtaatt acgacacctt cgacatgaaa gccctcggtg aagacagcta
    13141 ccgcgatctc agcggcattg gcattcccgt cgctaaaaag tgcaaagccc tggcccgcga
    13201 ttccttaagc ctgcttgcct acgtcaaata atccctgata cctttttgta gaaatattga
    13261 ccgtgcatcc gcggtcaatg ttagctatta tgttgcgccc tttttttacg ggtgttaaca
    13321 aaggaggtat caacccatgg ccgaaaaaaa acagtggcat gaaacgctac acgaccagtt
    13381 tgggcagtac tttgcggtag ataacgttct gtatcatgaa aagaccgatc accaagatct
    13441 gatcattttt gagaacgctg catttggtcg cgtaatggcg ctggatggcg tagtacaaac
    13501 caccgagcgc gacgagttta tctatcatga gatgatgacc catgttccgc tactggccca
    13561 cggtcacgcg aaacatgtgc tgattatcgg cggcggcgac ggtgccatgc tgcgtgaagt
    13621 aacccgacat aaaaacgttg agtcaatcac gatggtggaa atcgatgcgg gtgtcgtgtc
    13681 gttctgccgt cagtatctgc ccaaccataa cgccggtagc tacgacgatc cgcgctttaa
    13741 gctggtgatc gacgatggcg tcaatttcgt taatcaaacc agccagacct ttgatgtcat
    13801 tatctccgac tgcaccgatc ctatcggtcc cggcgaaagt ctgttcacct cagcatttta
    13861 tgaaggctgc aaacgttgcc tgaatcctag cggtatcttc gtcgcacaaa acggcgtctg
    13921 ctttttacag caggaagaag ccatcgacag ccatcgcaaa ctcagccatt acttcagcga
    13981 cgttggcttt tatcagacgg cgatcccgac ctattacggc ggtatcatga cttttgcatg
    14041 ggcgacagat aacgacgcct tacgccatct ctcaaccgaa attattcagg cgcgttttct
    14101 cgcttctggc ctgaaatgcc gttattacaa tccggcaatc catacggcag cttttgcctt
    14161 acctcagtat ctgcaagatg cactggcttc acagccgtcc taaggagaag ataagaaatt
    14221 gaaaaaactg aaactgcatg gctttaataa tctgaccaaa agtctgagtt tttgtattta
    14281 cgatatctgc tacgccaaaa ctgccgaaga gcgcgacggt tatattgctt atatcgatga
    14341 actctataat gccaaccgtc tgaccgaaat cctgtcagaa acctgttcca ttatcggggc
    14401 caatattctt aacatcgccc gccaggatta cgaaccacag ggtgccagcg tcactattct
    14461 ggtgagtgaa gaaccggttg acccgaaact catcgacaaa acagaacacc ccggcccact
    14521 gccagaaacg gtcgttgccc atctcgataa aagtcatatt tgcgtacata cctacccgga
    14581 aagccatcct gaaggtggtt tatgtacctt ccgcgccgat attgaagtct ctacctgcgg
    14641 cgtgatttct ccgctgaagg cgctgaatta cctgatccac cagcttgagt ccgatatcgt
    14701 aaccattgat tatcgcgtgc gcggttttac ccgcgacatt aacggtatga agcactttat
    14761 cgaccatgag attaattcga ttcagaactt tatgtctgac gatatgaagg cgctgtatga
    14821 catggtggat gtaaacgtct atcaggaaaa tatcttccat accaagatgt tgcttaaaga
    14881 gttcgacctt aagcactaca tgttccacac caaaccggaa gatttaaccg acagcgagcg
    14941 ccaggaaatt accgctgcgc tgtggaaaga aatgcgcgag atttattacg ggcgcaatat
    15001 gccagctgtt taacggctct ggcggagctc caggctccgc cagatttatt tacttctgct
    15061 gcacgaaatt gcggtaagcc gccacgacct gcagaaaatc ctcaacgccg catagcgaca
    15121 ggctttcttc gtcgtagtag ttcatcccct cttccatttc atcgccagcg aattccagtt
    15181 gattggcgcg aaccatcacc tcttcaccgt ccatccacag ggtgtattca tgccctgccc
    15241 gttgccagga ccgttcgcta cctttcagtg cgtgcgctgc ttgttccact tcatcaagca
    15301 aggccaggtt ttctttcacc tcttcattaa accagtgccc gaccacttca tgccccatgg
    15361 acatacgcac ctttaccact ccggtaatat cgcgcagaaa ttcgtaatcc atagtgtgtt
    15421 cctctgctcc cggcaatgcg ccgaaatcgc attgcgccat tgatgtaatt atcgcagcct
    15481 taccggagaa aaacagcgga acggcgatgg tttagaaata aaaaatgccc gggaatctca
    15541 ttcaccgggc attgtgtcgt ttatgcgcag cgcgtgcgct tacttattac accgcagtct
    15601 ggaaaatcac cccatcggct ttttcggtgt actgagaaag ttggttgaag ttcagataac
    15661 gataagtatc aacggcagtt ttatctactt gcgcaacgta ggtctggtac tcttccggcg
    15721 tcggcagttt gccaatcagc gccgcaacag ccgccagttc tgcagaagcc aggaagacat
    15781 tcgcgccagt ccccagacgg ttcgggaagt tacgggtaga ggtggaaacc accgtcgcac
    15841 cgtctgctac acgcgcctgg ttacccatac acagagaaca gcccgggatc tcgatacgag
    15901 ccccgctctt accgaagacg ctgtagtagc cttcttcagt caactgtgcg gcgtccatac
    15961 gggttggcgg tgccacccac aggcgggtcg gcaactggcc tttatgcgca tccagcagtt
    16021 tacccgcagc acggaagtga ccgatgttag tcatgcaaga accgataaat acttcgtcga
    16081 tcttctcgcc ctgtaccgca gacagcggac gcgcgtcatc cgggtcgttc ggagcacaca
    16141 ggattggctc tttaatatcc gccagatcga tgtcaatcac tgccgcgtat tccgcatctg
    16201 catcggcttc cagcagctca ggattcgcca gccatttttc catgccctga atacgacgtt
    16261 ccagggtacg acgatcgccg taaccttccg cgatcatcca cttcagcagg acgatattag
    16321 agttaaggta ttcgatgatt ggttctttgt tcagcttgat agtacaacca gcggcagaac
    16381 gctcagcgga cgcatcggta agctcaaagg cctgctcaac tttcagatcc ggcagacctt
    16441 caatttccag aatgcggcca gagaagatgt ttttcttgcc tttcttctca acggtcagca
    16501 gaccttgttt gatggcatac agcggaatgg cgtgtaccag atcgcgcagg gtgatgcccg
    16561 gctgcatttt gcctttgaag cgcaccagaa cggattccgg catatccagc ggcattacgc
    16621 ctgttgcggc tgcaaatgcc accagaccag aacccgccgg gaaagagata ccgatcggga
    16681 aacgggtatg ggagtcacct ccggtaccga cggtatccgg cagcagcata cggttcagcc
    16741 aggagtggat tacgccgtca cccggacgca gcgacacacc gccacggttc ataatgaagt
    16801 ccggcagcgt gtggtgcgtg ttcacgtcaa ctggcttcgg atacgccgcg gtgtggcaga
    16861 aagactgcat caccaggtca gccgagaagc ccaggcacgc caggtctttc agttcatcac
    16921 gggtcatcgg gccggtagtg tcctgtgaac ctacagaagt cattttcggt tcgcagtacg
    16981 cgcccggacg aatgcctttc acgccacagg cacggcctac cattttctgc gccagcgaga
    17041 agccgcgatc gctctcagcg acatctttcg cctgacggaa cacatcactg tgcggcagac
    17101 caagtgcttc acgcgctttg gtggtcaggc cacgcccgat aatcagcggg atacggccgc
    17161 cagcacgcac ttcatcaatc agcacgtcgg ttttcagttc gaaggtcgcc agcagttcgc
    17221 ctgtttcgtg gttacgcact tcacctttgt acgggtaaac gtcaatcacg tcgcccatgt
    17281 tcaggttaga gacgtcgact tcgattggca gtgcacccgc gtcttccatc gtgttaaaga
    17341 agatgggtgc aattttaccg ccgaggcaca aaccaccgcc gcgtttgttc ggcacatgtg
    17401 gaatatcatc gcccataaac cacagaacgg agttcgtggc ggatttacgc gatgaacccg
    17461 tacccacaac gtcaccgacg tacgccagcg ggaaaccttt ctgttgcaga gcttcaatct
    17521 gtttgatcgg gccaacaaca cctggctggt ctggctcaat accttcacgg gcgtttttca
    17581 gcatcgccag cgcgtgcagt gggatatccg ggcgcgacca cgcatccggt gccggagaaa
    17641 ggtcatcggt gttggtttcg ccagtgactt tgaagacggt aacggtcagt ttttcagcca
    17701 gcgccgggcg attcagaaac cattcggcat ccgcccagga ctgcattacc tgcttcgcat
    17761 attcgttgcc tgctttcgct ttctcttcta cgtcatagaa gttatcgaat atcagcagtg
    17821 tgtgagaaag tgctttggca gcgatcggtg ccagtttggc atcatccagc gcgtcgatca
    17881 gcggatgaat gttgtaacca ccctgcatgg tgcccagcag ttcgatggct ttttccggag
    17941 tcagcagagg ggatttggct tcgcctttcg cgatagcagc caggaagcct gctttgacat
    18001 aggcggcttc atcgacgcca gggggaacac ggttggttaa cagatctaac aggaattctt
    18061 cttcgcccgc gggcgggttt ttcagcagct ctacaagtgc ggccatttgg tttgcatcca
    18121 ggggtttggg cgcaatcccc tcagcggcac gctcagctac gtgcttacgg tattcttcta
    18181 gcacgacggt tctcctcgct ctcattgtca tagtgcggca ggcgattctc ttcacgctcc
    18241 tgtgagacag cagtttgtag ggtaaatgcc cagtaccgca acgggcagaa tagcaggatt
    18301 ttgacgacgt gttaatctgt ttacaaaaaa gcaacataaa aaagtggctg aatcgttaag
    18361 gatggtctag agattgtttc cctacgtaaa aacttcgtta attcgcatgg tgataatcac
    18421 ctttctcaac gaatcccaag attagtcaaa atttaaacta ccgcctcttt atactcggat
    18481 taacagcacc tgcgggtggc agttcgccga ccattgcgat ttccttgaga tccgaattat
    18541 gaaaatgact ttgccgttta aaccccatgt gctggcacta atttgcagtg ccgggctttg
    18601 tgccgcctct gccgggctat atataaaaag ccgcacagtg gaagcggctg tggaaacgca
    18661 atcgacacaa ctggctgtgt ctgacgctgc cgcggttacg cttcctgcaa cggtttccgc
    18721 gcctcccgta acacccgccg tcgttaaatc cgcattcagc actgcacaaa tagatcaatg
    18781 ggtcgcgccc gtcgcgctgt atcccgacgc cctactttcg caggtgctga tggcatcaac
    18841 ctatccggca aacgttgctc aagcagtgca atggtcgcac gataatccac ttaaacaagg
    18901 cgatgctgct attcaggcgg tatctgacca gccgtgggac gccagcgtta aatcactggt
    18961 ggcctttcca caattgatgg cattgatggg cgaaaacccg caatgggtgc aaaacctggg
    19021 cgatgctttt ctggcgcagc cgcaggacgt gatggactcg gtacagcgat tgcggcaact
    19081 ggcgcaacaa accggttcgc tgaagtcatc aaacgaacaa aaagttatta ccacaacgaa
    19141 gaaagctgta ccggtaaaac agacagtcac ggcacccgtc ataccatcca ataccgtttt
    19201 aactgccagc cccgtcatta cagagcctgc aacaaccgtc atttccattg agcccgccaa
    19261 tcctgatgtg gtctatattc ccaactacaa cccaaccgtg gtttacggga actgggccaa
    19321 tactgcgtat ccgccggttt atctgccacc accagccgga gaaccgttta ttgacagctt
    19381 tgtgcgcgga ttcggctata gcatgggtgt tgctaccacg tacgcactat tcagcagcat
    19441 cgactgggat gacgacgatc atgaccatca tcatcatgac gatgatgatt atcatcacca
    19501 cgatggcggt catcgtgacg gtaatggctg gcaacacaac ggcgacaaca tcaatatcga
    19561 cgtcaacaat ttcaaccgta tcaccggtga gcatcttact gataagaata tggcatggcg
    19621 gcacaatcca aactaccgta atggtgtgcc ctatcatgat caggatatgg caaagcggtt
    19681 tcatcaaacc gatgtcaacg gcggaatgag tgccacgcag ctacctgctc caacacgcga
    19741 cagccagcgt caggcggcag caagtcagtt tcagcaacga acacacgccg cccccgtcat
    19801 tacacgagat acccaacgtc aggcagcggc acagcggttt aatgaagctg aacactatgg
    19861 gagctatgac gacttccgcg acttcagccg tcgccaaccc ctgacccagc aacaaaagga
    19921 cgccgctcgt cagcgttatc agtcagcttc tcctgagcag cgccaggcag ttcgcgagag
    19981 aatgcagact aacccgcaga tccagcagcg aagagaggca gcgcgtgagc gcattcagcc
    20041 cgcctcgcct gagcagcgcc aggcagtccg cgagaaaatg cagactaacc cacagatcca
    20101 gcagcgaaga gacgcagcgc gtgagcgtat tcagtcagcc tcgcctgagc agcgccaggt
    20161 gtttaaggaa aaagtacagc agcgcccact gaaccaacag caacgtgata acgcccgcca
    20221 gcgtgttcaa tcagcatcac ctgaacaacg tcaggttttt cgggagagag ttcaggagag
    20281 ccgcccacaa cgtctaaacg acagtaaccg tactgccaga ttgaataacg atcaacggtc
    20341 agcagtacgc gaacgtctct ctgagcgcgg agcaaggcga ctggaaaggt aaattacaga
    20401 cgtaaaaaaa gcggcgtggt tagccgcttt tttaattgcc ggatgttccg gcaaacgaaa
    20461 aattacttct tcttcgcttt cgggttcggc aggtcggtaa tgctaccttc gaacacttct
    20521 gccgccaggc ccacagactc gtgcagagtc gggtgcgcat ggatggtcag cgcgatgtct
    20581 tcagcgtcac aacccatttc gattgccaag ccgatttcac ccagcagctc gccgccgttg
    20641 gtaccgacaa tcgcaccacc gatcacacgg tgagattctt tgtcgaaaat cagcttggtc
    20701 ataccgtctg cgcagtcgga agcgatagca cgaccagaag cagcccacgg gaaggtggcg
    20761 gtttcatagc tgatgccttt ctctttcgct tctttctcag tcagacctac ccatgcaact
    20821 tctggttcgg tataggcgat agacgggata actttcggat cgaagtagtg ttttttaccg
    20881 gcgataactt cagcggcaac gtgaccttcg tgaacacctt tgtgtgccag catcggctga
    20941 ccaacgatat cgccgatagc aaagatgtgc ggtacgttgg tacgcagctg tttgtcaacg
    21001 cggatgaaac cacggtcgtc cacttccacg ccagctttgc ctgcgtcgag gtttttaccg
    21061 ttcggcacac gaccaattgc taccagcacg gcgtcgtaac gctgcggttc agcgggtgct
    21121 tttttgcctt ccatcgtcac ataaataccg tcttctttcg cttcaacggc ggtaactttg
    21181 gtttccaaca tcaggttgaa tttcttgctg atacgcttgg tgaagacttt aacgatgtct
    21241 ttgtcagctg ccgggataac ctggtcgaac atttcaacca cgtcaatctg tgaacccagc
    21301 gcgtggtata cggtgcccat ttccagaccg atgataccgc cacccattac cagcaggcgt
    21361 tctggtactt ctttcagttc cagcgcgtca gtggagtccc agatacgcgg atcttcatgc
    21421 ggaataaacg gcagttggat cgggcgagaa cccgctgcaa tgatcgcgtt gtcgaagttg
    21481 atcacggttt taccgttctc accttcaact tccagggtgt tagccccggt aaatttaccc
    21541 agaccgttga ccactttgac tttgcggcct ttcgccatac cagccagacc accggtcagc
    21601 tgattgatca ctttctcttt ccaggtacga atcttgtcaa tatcggtttt cggttcgccg
    21661 aagacgatac cgtgttcagc cagcgctttg gcttcttcga taacttttgc tacgtgcagc
    21721 agtgctttag aagggataca gccgacgttc aggcaaacac cgccaagggt gttgtaacgt
    21781 tctacgatta cggtttccag acctaaatca gcgcaacgga aggcagcgga gtaacctgcg
    21841 gggcctgccc caagtaccac gacctgagtt ttgatttcag tactcatcat gacctctata
    21901 tatttatctc cggcggtcat acccgtcgtc tttcaggccg cagcggcgtt agcttcacgc
    21961 cctcacccca gtcacttact tatgtaagcc cctggggatt ctggcgcttg ctaccttgct
    22021 gcacccagaa atccataggg tatgtgaagt aataccctaa ccaccaccgg gtcgttctat
    22081 ccgtcggtat tttataaaat tgttaacaat ttttaaacaa caaacggcaa ccgatttgtc
    22141 tattcgctaa taacctcaat acattcatga gattaccaga aaaaagccgg ccgttgggcc
    22201 ggctctttta cttacatcac cagacggcga atgtcagaca gcgtgttgtt aatgatggta
    22261 atgaaacggg caccatcagc accgtcgatc acgcggtggt cgaaggagag agaaatcggc
    22321 agcatcagac gcggcacgaa ctctttacca ttccacaccg gctccatcgc ggacttggaa
    22381 acgccgagga tagccacttc cggcgcgttc acaatcggcg cgaagtgggt agtacccagg
    22441 ccgccgatgc tggagatggt gaagcaaccg ccctgcattt cgcccgcagt cagcttaccg
    22501 tcacgcgctt tcttagaaat agtcatcagc tcgcgagaca gctcgatgat gcctttcttg
    22561 ttgacgtctt tgaataccgg aacaaccaga ccgttcgggg tatccaccgc cacaccgatg
    22621 ttgatgtatt tcttcagggt cagacgctga ccgtcttccg acagcgaact attgaagcga
    22681 ggcatctgct caagagctgc agcaacggct ttcatgatga agacaaccgg ggtgatcttc
    22741 acatccagct tacgtttcgc cgcttcttcg ttctgctgtt tacggaacgc ttccagctcg
    22801 gtgatatcgg ttttgtcgaa gtgggtaaca tgcgggatca tcacccagtt acggctcagg
    22861 ttagcaccag aaattttctg gatacggccc agttccactt cttcgatttc accaaacttg
    22921 ctgaagtcca ccttcggcca cggcagcatg cctgggatac cgccgccagt cgccgccgga
    22981 gctgcttctg cacgtttgat agcttctttc acgtaagcct gaacgtcttc gcgcaggata
    23041 cgacctttac ggccagtgcc cttcactttc gctaggttaa caccaaactc gcgtgccaga
    23101 cggcggatca gcggagtcgc gtgaacataa gcgtcgtttt cagcaaattc agatttgcct
    23161 tccgctttcg cagctggtgc tgctgccggg gcttcagctt ttgctgccgg tgccggcgct
    23221 gccgcttcct gtttcgcagg agctgccgca ggcgctgcgc cttcaacttc gaagatcata
    23281 atcagcgagc cagttttcac tttatcgcca acgttgactt tcagttcctt cacgacgcct
    23341 gcaaacggcg ccggaacttc catagaagct ttgtcgcctt ctacggtgat cagtgactgt
    23401 tcagcggcaa ctttgtcgcc cactttcacc atcacttcag tcacttcaac ttcgtcaccg
    23461 ccgatatccg gaacgttaac ttctttcacg ccagctgctg gtgcaggggc cgctgccgga
    23521 gccgcttcct gtttagccgc cggagctgcc gcgcctgctt cacccgcgac ttcgaagacc
    23581 ataatcagcg agccggtaga cactttgtca cccacgttca ctttgatctc tttcacggtg
    23641 ccagcaaacg gagccggaac ttccatagaa gctttatcgc cttctacggt gatcagcgac
    23701 tgttcagctt caactttatc gccaactttc accaggattt cggtcacttc aacttcgtcg
    23761 ctgccgatat ccggaacgtt aacgtctttt gccgccgcag ccgcgggtgc tgctgccgga
    23821 gctgcttctt tcttctcttc tgcctgagca ggtgcagcgt ctgctgcacc gtcggcggaa
    23881 tcgaaaatca taatcagtgc gccggtctgg gttttatcgc caacagagac tttgatctct
    23941 ttaacgatac ccgcctgcgg agacggaact tccatagagg ctttgtcgcc ttctacggtg
    24001 atcagcgact gttcggcttc aactttgtcg cccactttga ccaggatctc ggtgatttca
    24061 acttcatcag ccccgatgtc cggtactttg atttcgatag ccattattct tttacctctt
    24121 acgccagacg cgggttaact ttatctgcat cgatgttgaa tttggcgatt gcgtcagcaa
    24181 ccactttctt atcgatttcg ccacgtttag ccagttcgcc cagcgccgca accacgacat
    24241 aagaagcatc aacttcgaag tggtgacgca ggttctcacg gctgtcggaa cgaccgaagc
    24301 catcagtacc cagtacgcgg tagtcgtcag ccggtacgta agtacggacc tgctcagcga
    24361 acagtttcat atagtcggta gatgccactg ccggagcgtc gttcatcacc tgagcgatat
    24421 acggaacgcg cggagtttcc agcggatgaa gcatgttcca gcgttcacaa tcctgaccat
    24481 cacgcgccag ctcggtgaag gaggtcacgc tataaacgtc agaacctacg ccgtaatctt
    24541 tcgccaggat ctctgccgct tcacggacgt gacgcaggat agaaccggag cccagcagct
    24601 gaactttacc tttgctacct tcaatggttt cgagtttgta gataccttta cggatacctt
    24661 cctcagcacc ttccggcatt gccggcatgt ggtagttttc gttcagcgtg gtgatgtagt
    24721 agtaaacgtt ctcttgtttt tcaccgtaca tacgctccag accgtcatgc ataatgacag
    24781 caacttcgta agcgtaagcc gggtcgtaag agatacagtt cggaatagtc agcgactgaa
    24841 tgtggctgtg accatcttca tgctgcagac cttctccgtt cagggtggta cgaccggaag
    24901 taccgccgat caggaagcca cgcgcttgct ggtcgccagc cgcccagcac agatcgccaa
    24961 tacgctggaa gccgaacatc gagtaataga tgtagaacgg gatcatcggc agattgttgg
    25021 tgctgtaaga ggtcgccgct gccagccagg aacaacctgc gcccagctcg ttgatccctt
    25081 cctgcagaat ctgacctttc tcgtcttctt tatagtaagc aacctgctcg cggtcctgcg
    25141 gggtgtactg ctgaccgttc gggctgtaaa taccaatctg acggaacaga ccttccatac
    25201 cgaaagtacg cgcttcgtcg gcgatgatcg gtaccagacg atctttgatc gacttgttct
    25261 tcagcattac gttcagggca cgaacgaaag cgatagtggt agagatctct ttgctctgct
    25321 cttccagcag cgcgccgaag tcttgcaggc tcggcagctc aagcttctcg gtgaagttcg
    25381 gctgacggct tggcagataa ccgtgcagtt tctgacgctg tgcgtgcaga taggtatgct
    25441 cttcagaacc ttccgggaag gtgatgtacg gcagtttttc gatatctgca tcagacaccg
    25501 gcacattgaa acggtcgcgg atgtgacgca cgccgtccat gttcattttc ttaacctggt
    25561 gcgcgatgtt tttaccttca gccgcgtcgc ccatgccgta acctttaatg gaatgagcaa
    25621 ggattactgt cgctttgcct ttggtttcct gcgctttctt gaatgcagcg tagattttct
    25681 tcggatcgtg accaccacgg ttcagtgccc agatctgctc gtcagtccag tctgcaacca
    25741 gtgctgcggt ttcaggatat ttaccgaaga agtgttcacg aacgtacgca ccatctttcg
    25801 atttgaaggt ctggtagtcg ccgtcaacgg tttcgttcat cagctggatc agtttaccgc
    25861 tggtatcttt acgcagcagt tcatcccaac ggctacccca catcactttg atcacgttcc
    25921 agccagcacc ttcgaagatg ccttccagtt cgttgatgat cttgccgtta ccggtgaccg
    25981 ggccgtcaag acgctgcagg ttacagttga taacgaagac caggttatcc agtttttcac
    26041 gggtagcgat ggtgatcgca cctttggatt ccggttcgtc catttcaccg tcgccgagga
    26101 acgcgtaaac ggtctgttta gaggtatctt tcaggccacg gtgttccaga tatttcagga
    26161 atttagcctg gtaaatagca ccaatcggcc ccagccccat agatacggtc gggaactgcc
    26221 agaattccgg catcagtttc gggtgcggat aggaagagag gccattgccg tgaacttcct
    26281 gacggaagtt atccagctgc tcctgagtca gacgaccttc caggaaagca cgagcgtaca
    26341 cgcccgggga gatgtggccc tggaagtaaa ccaggtcgcc gccatcctgc tcgttgcgtg
    26401 cacggaagaa gtggttaaag cacacatcat aaatggttgc ggaagactgg aaggacgcca
    26461 tatggccgcc cagttcgagg tcttttttcg acgcacgcag caccgtcatg atggcgttcc
    26521 agcggatagc tgaacgaata cggcgttcca gttccagatt acccggatac tccggttgtt
    26581 cttcaacggg gatggtgttg atgtagttgc tgatacctgt gcctgcggct acgtttacac
    26641 cgcctttgcg ggcttcagca agcagttggt cgatcagata ctgagcacgc tcaacacctt
    26701 cttcacggat gaccgattcg atcgcctgga gccagtcgcg agtttcgatc ggatccacgt
    26761 catttgggaa acgttctgac atgggttatt ccttatctat ctaataacgt tgagttttct
    26821 ggaacctgtc ccattgaact ctcgccggaa agctcaataa gacaggttct acgtttagtt
    26881 gccgcgcttt tatatgcgct tgatttacaa catcttctgg ataattttta ccagaaaaat
    26941 cactaattct ttcgttgctc cagacgacgc agagaacgct cacggcggct ctcttcacga
    27001 cttctgtcga gcaaaatttc ttcgataaag gccagatggc gatgcgatgc ttcgcgcgct
    27061 tcttccggct taccggccat aatcgcttca aatatgcggg tgcggtgact actcaccagc
    27121 ggcagcatct cgcgacgcga atagagcaat tcgaagttct ggcggacatt ctgggccaac
    27181 atcggctcca tacaccttag cagatgaagc agaaccacat tgtgggccgc ttcagtgaca
    27241 gcaatctgat actggagtac ggcgtttgat tccgcgtcca gatcgccaga ctgctgcgcc
    27301 agttctatgg cgtgatggag ttcacggatg cgttccttgt cttcatcggt actacgcagc
    27361 gcggcgtaat aagcggcgat accttccagg gcgtgtcgtg tttcgagcaa gtcatactgt
    27421 gactcaggat ggtcggagag cagctccacc agcggatcgc tgaagctttg ccataggctg
    27481 ctctggacaa aagtgccgcc accctggcga cgaagcaaca agcccttcgc ttcgagacgt
    27541 tgaatcgcct cacgcaagga gggacgggag acgtcaaact gttttgccag ttcgcgttcc
    27601 ggtgggagtt tttcgcccgg gcggagagtg ccttcgagga tcaaaaactc cagttgctgc
    27661 tcaatcacat cggagagttt tggttggcgg attttgctgt aggccatgag ttcctgtctt
    27721 aagccacttg ccgaagtcaa ttggtcttac caatttcatg tctgtgacgc taaagtaaca
    27781 aagtattcac cttatgtcca tacaggtttt gattgaaatc atgaaactgt gcacatttta
    27841 acaacttgac atatataacg tttcaaagtt gtaaccatgc acaaatgtag actttacgta
    27901 ggaaagggat tttttaacga ttattaaact ataaaaatcc gaattgaacc gattcactta
    27961 ccaattttgt gatttttaat tcaattaaaa cgaatttaaa ttcattctac atattgagag
    28021 gggttgaggc tgagctttac aaacggtttc tttttaagca actcatcttc aaccatgcat
    28081 aaagcgggtg cattcgctgc cgcataccat tattcttgat ctgacggaag tctttttgta
    28141 acaattcaaa cttctttgat gtaaacaaat taatacaaca aacggaattg caaacttaca
    28201 cacgcatcac tgcgtagatc aaaaaaacaa ccaccgcacg aggtttcatg atggaaggtc
    28261 aacagcacgg cgagcagcta aagcgcggcc ttaaaaaccg ccatattcag cttatcgcgc
    28321 tgggtggcgc gatagggacc gggttattcc tgggtagcgc ctccgtaata cagtccgcag
    28381 ggccagggat tatcctgggt tacgccattg ctggttttat cgcctttctg atcatgcgtc
    28441 agctgggtga aatggtggtc gaagaacctg tcgcaggctc ctttagccac tttgcttata
    28501 aatactgggg cagttttgcc ggtttcgcct ctggctggaa ctactgggta ctgtacgttt
    28561 tagttgccat ggctgagctg actgccgtgg gtaaatacat tcagttctgg tatccggaaa
    28621 tccccacctg ggtttctgcc gccgtattct ttgtggtgat taacgccatc aacctgacca
    28681 acgttaaagt gtttggcgag atggagttct ggtttgccat tatcaaagtt atcgcggtgg
    28741 tagcgatgat catcttcggc ggctggctgc tattcagtgg caacagcggc ccgcaggcga
    28801 ccgttagcaa cctgtgggat cagggtggtt tcctgccgca cggcttcacc gggctggtga
    28861 tgatgatggc gattatcatg ttctcgttcg gtggtctgga actggtgggg atcaccgcag
    28921 cagaagctga taacccggag caaagtatac cgaaagcaac taaccaggtt atctaccgca
    28981 tcctgatttt ctatattggt tcgttagccg ttctgctctc actgatgccg tggacccgcg
    29041 ttaccgccga taccagtccg tttgtgctga tcttccacga gttaggcgat acctttgtgg
    29101 cgaatgcgct gaacatcgtg gtactgactg cggcgctctc cgtgtacaac agctgcgtat
    29161 attgcaacag ccgtatgctg tttggtctgg cacaacaggg taatgcgcca aaagcgctgg
    29221 cgtctgtcga taaacgtggt gtaccagtaa ataccattct ggtgtctgca ctggtaacgg
    29281 cgttgtgcgt actgattaac taccttgccc cagagtccgc tttcggactg ttaatggcgc
    29341 tggtggtatc tgcactggta atcaactggg cgatgattag cctggcgcat atgaaattcc
    29401 gtcgcgccaa gcaggaacaa ggcgtggtaa ctcgcttccc tgctctgctt tatccgctgg
    29461 gtaactggat ctgcctgctg tttatggcgg cggtactggt gattatgctg atgaccccag
    29521 gaatggcgat ttcggtatac ctgatcccgg tatggctgat cgtgttaggt atcggctatc
    29581 tgtttaaaga gaaaaccgcc aaagccgtaa aagcgcatta atctctctac gccctcaccc
    29641 gtacagggtg agggcaataa tctttacacc aacgccccgt aaatcgtcag tagtgcaatc
    29701 accaccacga ccacgaacga ggttttcttc gccattgaaa ccgctgcctt cggcgtctcc
    29761 accttatcga catgcggttc acgcgccaga gagaactgcg ccagacgcgt taacacctga
    29821 tactgcgaag tatggaagtc acccagcgaa gcaaaccagg ccggtaacgc tttctcccca
    29881 tgaccgatca aggcatatac cacacccgca agacgaaccg gcacccaatc cagtacatga
    29941 agcacggcat caatgccgga ctgtaaacga tgatgcggcg tctggtatcg cgccagccag
    30001 tattgccatg cacgcaaaaa cgcatacccc atcagcgtaa cgggtcccca gattcccccc
    30061 acaatcaacc agaacagcgg agcaagataa aaacgaaagt taatccacag caatgcattt
    30121 tgcagctcac gcaaatactc acgttcatcg cagcctgccg ggacgccgtt aatcatggtg
    30181 agttcgccag ccatcgtgac acgggcatgg ctatcattac gtgaagcagc tgtcagataa
    30241 gcatgataat gaagacgaac tttacctgcg ccaatacaca gcaaaccaat cagcagccac
    30301 accagcagcg tgggaacgtt gaacaatact ccctgcaatg cgcgtaacag taaaaaagtc
    30361 acgcccatcg caataatggt catgcctaac gtgcgcccga gagaaaaatg tttcacccgc
    30421 cgaaagaacg cttcaagacg atgatcaagc tgccagtgct cgcccaactt aaacaggcgc
    30481 tcgaaaatta acaccagtaa ggttgtaaat agcgtcatgt tgtctccttg ctgaccagcg
    30541 cacgaaaccg cgcccaatca aatgcagggc cgggatcggt tttccgatcc ggcgcaatat
    30601 cacaatggcc cgtcatgtta ttagcgatat ctggatagcg atcaatcagt gcccgcgtaa
    30661 ccgccgcaag ctgttgatac tgcgcatcgg tatacgccag cgtatcggtg ccttcaagct
    30721 caatcccaat agaaaaatca ttgcagcgtt cgcgcccctg atactgagag actcccgcat
    30781 gccatgcacg tttatcgaaa ggaacatact ggactatttc accatcacgg cgaatcaaac
    30841 agtgagcgga gacgcgcaaa tgggcgatct cagcaaagaa aggatgtgcc tgcggatcaa
    30901 tagttccagt gaataatgcg tcgatccacg gaccgccaaa ctcgcctggc ggcaggctaa
    30961 tattgtgcac caccagcagg gtgggtgttt cgtcatccgg gcggcaatcg taatgtggtg
    31021 agggaacgcg gcgcgcgcca accagccccc cctgttctaa caacatgcag gatctcctta
    31081 tatgtggtgc taatacccgg ttcagagtag catgtttcta ctttatgatt cgttagctat
    31141 ctggagtttt aacatgccgc ctcgccgcta taaccctgac acccgacgtg acgagctgct
    31201 ggaacgcatt aatctcgata tccccggcgc ggtggcccag gcgctgcggg aagatttagg
    31261 cggaacagtc gatgccaaca atgacattac ggcaaaactt ttaccggaaa actctcgctc
    31321 tcatgccacg gtgatcaccc gcgagaatgg cgtattttgc ggcaaacgct gggttgaaga
    31381 ggtgtttatt caactggcag gcgacgatgt caccataatc tggcatgtgg atgacggcga
    31441 tgtcatcaac gccaatcaac ccttgttcga acttgaaggc ccatcccgcg tgctgttaac
    31501 gggcgaacgc actgcgctta attttgtgca aaccctttca ggagctgcca gtaaggtacg
    31561 ccactatgtc gaattactgg aaggcaccaa cacgcagttg ttggatacgc gcaaaacctt
    31621 acctggcctg cgttcagctc tgaaatacgc ggtactttgc ggcggcggag cgaatcaccg
    31681 tctggggctt tctgatgcct tcctgatcaa agaaaatcat attattgcct ccggctcagt
    31741 gcgccaggcc gtcgaaaaag cgtcctggct gcacccggat gcgccagtag aagtcgaagt
    31801 agagaatctg gaagaacttg atgaagccct gaaagcagga gccgatatca tcatgctgga
    31861 taacttcgaa acagaacaga tgcgcgaagc cgtcaaacgc accaacggca aggcgctact
    31921 ggaagtgtct ggcaacgtca ctgacaaaac actgcgcgaa tttgccgaaa cgggcgtgga
    31981 ctttatctcc gtcggtgcgc taactaaaca cgtacaagca ctcgaccttt caatgcgttt
    32041 tcgctaattg ctgacagatt tatccgctcc atcgcgggcg gataatctcc ccttccccaa
    32101 ctttcttcgt aacgcctcgc aaatttcttg tctttcgctg caacgaaata aaaaacctcg
    32161 gaagctgctt tcccgtttcg ttttttgccc ctcgcttgtg ctgatggcgt ttgccaaagt
    32221 agcgccaacc aaatcaagga gcgaaacaga tggacaagca acgcggtttt acacttatcg
    32281 aactgatggt ggttattggc atcattgcca ttttaagcgc cattggtatt cccgcttatc
    32341 aaaactacct gcgcaaagct gcactcaccg acatgctaca aacctttgtg ccttaccgta
    32401 ccgccgtaga gttgtgcgcg ctggaacatg gt
//
LOCUS       DADMHC010000026        30079 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.026, whole genome shotgun sequence.
ACCESSION   DADMHC010000026 DADMHC010000000
VERSION     DADMHC010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 30079)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30079)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30079
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.026"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..255
                     /locus_tag="JNZ57_000969"
     CDS             <1..255
                     /locus_tag="JNZ57_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708736.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase"
                     /protein_id="HAY8827273.1"
                     /translation="IRGEVELVRIRDAEGRIAAEGALPYPPGVLCVVPGEVWGGAVQR
                     YFLALEEGVNLLPGFSPELQGVYSETDADGMKRLYGYVLK"
     gene            complement(305..1561)
                     /locus_tag="JNZ57_000970"
     CDS             complement(305..1561)
                     /locus_tag="JNZ57_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311867.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease"
                     /protein_id="HAY8827274.1"
                     /translation="MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVY
                     SSLGIAAVFMPALLGIVADKWLSAKWVYAICHTIGAITLFMAAQVTTPEAMFLVILIN
                     SFAYMPTLGLINTISYYRLQNAGMDIVTDFPPIRIWGTIGFIMAMWVVSLSGFELSHM
                     QLYIGAALSAILVLFTLTLPHIPVAKQQANQSWTTLLGLDAFALFKNKRMAIFFIFSM
                     LLGAELQITNMFGNTFLHSFDKDPMFASSFIVQHASIIMSISQISETLFILTIPFFLS
                     RYGIKNVMMISIVAWILRFALFAYGDPTPFGTVLLVLSMIVYGCAFDFFNISGSVFVE
                     KEVSPAIRASAQGMFLMMTNGFGCILGGIVSGKVVEMYTQNGITDWQTVWLIFAGYSV
                     VLAFAFMAMFKYKHVRVPTGTQTVSH"
     gene            complement(1763..2842)
                     /gene="mltC"
                     /locus_tag="JNZ57_000971"
     CDS             complement(1763..2842)
                     /gene="mltC"
                     /locus_tag="JNZ57_000971"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417438.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltC"
                     /protein_id="HAY8827275.1"
                     /translation="MKKYLALALIAPLLISCSTTKKGDTYNEAWVKDTNGFDILMGQF
                     AHNIENIWGFKEVVIAGPKDYVKYTDQYQTRSHINFDDGTITIETIAGTEPAAHLRRA
                     IIKTLLMGDDPSSVDLYSDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLLK
                     NRLQSRSNGLRIIYSVTINMVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTES
                     SFNPYAVSRSDALGLMQVVQHTAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLAM
                     LNNVYLGGIDNPTSRRYAVITAYNGGAGSVLRVFSNDKIQAANIINTMTPGDVYQTLT
                     TRHPSAESRRYLYKVNTAQKSYRRR"
     gene            complement(2907..3182)
                     /locus_tag="JNZ57_000972"
     CDS             complement(2907..3182)
                     /locus_tag="JNZ57_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HAY8827276.1"
                     /translation="MSRTIFCTFLQREAEGQDFQLYPGELGKRIYNEISKEAWAQWQH
                     KQTMLINEKKLNMMNAEHRKLLEQEMVNFLFEGKEVHIEGYTPEDKK"
     gene            complement(3210..4262)
                     /gene="mutY"
                     /locus_tag="JNZ57_000973"
     CDS             complement(3210..4262)
                     /gene="mutY"
                     /locus_tag="JNZ57_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HAY8827277.1"
                     /translation="MQASQFSAQILDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQ
                     VATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYARARNMHKAAQQVATLHGG
                     KFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEV
                     ENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWSL
                     YPGKKPKQTLPERTGYFLLLQHEDEVLLAQRPPSGLWGGLYCFPQFADEESLRQWLAQ
                     RQIAADNLTQLTAFRHTFSHFHLDIVPMWLPVSSFTGCMDEGNALWYNLAQPPSVGLA
                     APVERLLQQLRTGAPV"
     gene            4423..5142
                     /gene="trmB"
                     /locus_tag="JNZ57_000974"
     CDS             4423..5142
                     /gene="trmB"
                     /locus_tag="JNZ57_000974"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HAY8827278.1"
                     /translation="MKNDVISPEFDENGRPLRRIRSFVRRQGRLTKGQEHALENYWPV
                     MGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGA
                     CLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVP
                     FAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTK
                     FEQRGHRLGHGVWDLMFERVK"
     gene            5142..5468
                     /locus_tag="JNZ57_000975"
     CDS             5142..5468
                     /locus_tag="JNZ57_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF469 domain-containing protein"
                     /protein_id="HAY8827279.1"
                     /translation="MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDD
                     FINEVIEPNKLAFDGSGYLAWEGLICMQEIGKCTEEHQAIVRKWLEERKLDEVRTSEL
                     FDVWWD"
     gene            5652..6371
                     /locus_tag="JNZ57_000976"
     CDS             5652..6371
                     /locus_tag="JNZ57_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2884 domain-containing protein"
                     /protein_id="HAY8827280.1"
                     /translation="MMRKMLLAAALSVTAMTAHADYQCSVTPRDDVIVSPQTVQVKGE
                     NGNLVITPDGNVMYNGKQYSLNAAQREQAKDYQAELRSTLPWIDEGAKSRVEKARIAL
                     DKIIVQEMGESSKMRSRLTKLDAQLKEQMNRIIETRSDGLTFHYKAIDQVRAEGQQLV
                     NQAMGGILQDSINEMGAKAVLKSGGNPLQNVLGSLGGLQSSIQTEWKKQEKDFQQFGK
                     DVCSRVVTLEDSRKALVGNLK"
     gene            6547..7593
                     /gene="ansB"
                     /locus_tag="JNZ57_000977"
     CDS             6547..7593
                     /gene="ansB"
                     /locus_tag="JNZ57_000977"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparaginase 2"
                     /protein_id="HAY8827281.1"
                     /translation="MEFFKKTALAALVMGFSGAALALPNITILATGGTIAGGGDSATK
                     SNYTAGKVGVENLVNAVPQLKDIANVKGEQVVNIGSQDMNDNVWLTLAKKINTDCDKT
                     DGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAAD
                     KASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARK
                     HTSDTPFDVSKLNELPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKSVF
                     DTLATAAKNGTAVVRSSRVPTGATTQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQ
                     TKDPQQIQQIFNQY"
     gene            7710..8717
                     /locus_tag="JNZ57_000978"
     CDS             7710..8717
                     /locus_tag="JNZ57_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1202 family protein"
                     /protein_id="HAY8827282.1"
                     /translation="MKKQWIVGTALLMLMTGNAWADGEPPTENILKDQFKKQYHGILK
                     LDAITLKNLDAKGNQATWSAEGDVSSSDDLYTWVGQLADYELLEQTWTKDKPVKFSAM
                     LTSKGTPASGWSVNFYSFQAAASDRGRVVDDIKTNNKYLIVNSEDFNYRFSQLESALN
                     TQKNSIPALEKEVKALDKQMVAAQKAADAYWGKDANGKQMTREEAFKKIHQQRDEFNK
                     QNDSEAFAVKYDKEVYQPAIAACHKQSEECYEVPIQQKRDFDINEQRRQTFLQSQKLS
                     RKLQDDWVTLEKGQYPLTMKVSEINSKKVAILMKIDDINQANERWKKDTEQLRRNGVI
                     K"
     gene            complement(8781..9917)
                     /gene="hemW"
                     /locus_tag="JNZ57_000979"
     CDS             complement(8781..9917)
                     /gene="hemW"
                     /locus_tag="JNZ57_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HAY8827283.1"
                     /translation="MVKLPPLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLL
                     CDLDNDVAYAQGREVKTIFIGGGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANP
                     GTVEADRFVDYQRAGVNRISIGVQSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSF
                     NLDLMHGLPDQSLEEALGDLRQAIELNPPHLSWYQLTIEPNTLFGSRPPVLPDDDALW
                     DIFEQGHQLLTAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDG
                     RILRTTKTRHPRGFMQGRYLESQRDVEAADKPFEFFMNRFRLLEAAPRAEFSAYTGLC
                     EDVIRPQLDEAIAQGYLTECADYWQITEHGKLFLNSLLELFLAE"
     gene            complement(9910..10503)
                     /locus_tag="JNZ57_000980"
     CDS             complement(9910..10503)
                     /locus_tag="JNZ57_000980"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XTP/dITP diphosphatase"
                     /protein_id="HAY8827284.1"
                     /translation="MQKVVLATGNAGKVRELASLLSDFGLDIVAQTDLGVDSAEETGL
                     TFIENAILKARHAAKVTGLPAIADDSGLAVDALGGAPGIYSARYSGEDATDQKNLQKL
                     LETLKDVPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIF
                     FVPSEGKTAAELTREEKSAISHRGQALKLLLDALRNG"
     gene            complement(10511..10801)
                     /locus_tag="JNZ57_000981"
     CDS             complement(10511..10801)
                     /locus_tag="JNZ57_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417428.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggU family protein"
                     /protein_id="HAY8827285.1"
                     /translation="MNAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVD
                     GQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEIAALIN"
     gene            complement(10798..11364)
                     /gene="yggT"
                     /locus_tag="JNZ57_000982"
     CDS             complement(10798..11364)
                     /gene="yggT"
                     /locus_tag="JNZ57_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotic shock tolerance protein YggT"
                     /protein_id="HAY8827286.1"
                     /translation="MNTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVT
                     QPIIGPLRRVIPAMGPIDSASLLVAYILSFIKAIVLFKVVTFLPIIWIAGLLILLKTI
                     GLLIFWVLLVMAIMSWVSQGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVL
                     LLYVINMGVAEVLQATGNILLPGLWMAL"
     gene            complement(11382..12086)
                     /gene="yggS"
                     /locus_tag="JNZ57_000983"
     CDS             complement(11382..12086)
                     /gene="yggS"
                     /locus_tag="JNZ57_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate homeostasis protein"
                     /protein_id="HAY8827287.1"
                     /translation="MNDIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIA
                     EAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLVAEHFDWCHT
                     IDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRL
                     RGLMAIPAPESEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTM
                     VRIGTAIFGARDYSKK"
     gene            12104..13084
                     /locus_tag="JNZ57_000984"
     CDS             12104..13084
                     /locus_tag="JNZ57_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417425.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HAY8827288.1"
                     /translation="MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDV
                     EELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ
                     LEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
                     YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSEPIRLALTAAETG
                     HLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLLQKLEVDKQEGRVAL
                     FELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQQRVGEGRL"
     gene            complement(13260..13676)
                     /gene="ruvX"
                     /locus_tag="JNZ57_000985"
     CDS             complement(13260..13676)
                     /gene="ruvX"
                     /locus_tag="JNZ57_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HAY8827289.1"
                     /translation="MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNL
                     IERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVE
                     ARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY"
     gene            complement(13676..14311)
                     /locus_tag="JNZ57_000986"
     CDS             complement(13676..14311)
                     /locus_tag="JNZ57_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708713.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HAY8827290.1"
                     /translation="MTAPFFPRILGAVAFLNQETEPLTMNLQHHFLIAMPALQDPIFR
                     RSVVYICEHNTNGAMGIIVNKPLENLKIEGILEKLKITPEPRDESIRLDKPVMLGGPL
                     AEDRGFILHTPPSNFASSIRISDNTVMTTSRDVLETLGTDKQPSDVLVALGYASWEKG
                     QLEQEILDNAWLTAPADLNILFKTPIADRWREAAKLIGVDILTMPGVAGHA"
     gene            complement(14348..15298)
                     /gene="gshB"
                     /locus_tag="JNZ57_000987"
     CDS             complement(14348..15298)
                     /gene="gshB"
                     /locus_tag="JNZ57_000987"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HAY8827291.1"
                     /translation="MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLY
                     LINGEARAHTRTLNVKQNYEEWFSFVGEQDLPLADLDVLLMRKDPPFDTEFIYATYIL
                     ERAEEKGTLIVNKPQSLRDCNEKLFTAWFSDLTPETLVTRNKAQLKAFWEKHSDIILK
                     PLDGMGGASIFRVKEGDPNLGVIAETLTEHGTRYCMAQNYLPAIKDGDKRVLVVDGEP
                     VPYCLARIPQGGETRGNLAAGGRGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDIIG
                     DRLTEINVTSPTCIREIEAEFPVSITGMLMDAIEARLQQQ"
     gene            complement(15311..16042)
                     /gene="rsmE"
                     /locus_tag="JNZ57_000988"
     CDS             complement(15311..16042)
                     /gene="rsmE"
                     /locus_tag="JNZ57_000988"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311849.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HAY8827292.1"
                     /translation="MRIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFD
                     GSNQVFDAEITSASKKSVEVKVLEGKIDDRESPLHIHLGQVMSRGEKMEFTIQKSIEL
                     GVSLITPLFSERCGVKLDSERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWC
                     AEQDEGLKLNLHPRASNSINTLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLG
                     PRVLRTETTALTAITALQVRFGDLG"
     gene            complement(16122..16829)
                     /gene="endA"
                     /locus_tag="JNZ57_000989"
     CDS             complement(16122..16829)
                     /gene="endA"
                     /locus_tag="JNZ57_000989"
                     /EC_number="3.1.21.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease I"
                     /protein_id="HAY8827293.1"
                     /translation="MYRYLSIAAVVLSAAFSGPALAEGINSFSQAKAAAVKVHADAPG
                     TFYCGCKINWQGKKGVVDLQSCGYQVRKNENRASRVEWEHVVPAWQFGHQRQCWQDGG
                     RKNCAKDPVYRKMESDMHNLQPSVGEVNGDRGNFMYSQWNGGEGQYGQCAMKVDFKEK
                     AAEPPARARGAIARTYFYMRDQYNLTLSRQQTQLFNAWNKMYPVTDWECERDERIAKV
                     QGNHNPYVQRACQARKS"
     gene            complement(16924..17421)
                     /locus_tag="JNZ57_000990"
     CDS             complement(16924..17421)
                     /locus_tag="JNZ57_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HAY8827294.1"
                     /translation="MKTSRLPIAIQQAVMRRLREKLAQANLKLGRNYPEPKLSYTQRG
                     TSAGTAWLESYKIRLNPVLLLENSEAFIEEVVPHELAHLLVWKHFGRVAPHGKEWKWM
                     MENVLGVPARRTHQFELQSVRRNTFPYRCKCQEHQLTVRRHNRVVRGEAVYRCVHCGE
                     QLVAK"
     gene            complement(17498..18892)
                     /locus_tag="JNZ57_000991"
     CDS             complement(17498..18892)
                     /locus_tag="JNZ57_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
                     /protein_id="HAY8827295.1"
                     /translation="MPDAKKQGRSNKAMTFFVCFLAALAGLLFGLDIGVIAGALPFIA
                     DEFQITSHTQEWVVSSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAA
                     PNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLS
                     DTAFSYTGAWRWMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTS
                     AEAKRELDEIRESLQVKQSGWALFKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPK
                     IFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVL
                     GTMMHIGIHSPSAQYFAIAMLLMFIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTA
                     TNWIANMIVGATFLTMLNTLGNANTFWVYAALNVLFILLTLWLVPETKHVSLEHIERN
                     LMKGRKLREIGAHD"
     gene            complement(19328..20482)
                     /gene="metK"
                     /locus_tag="JNZ57_000992"
     CDS             complement(19328..20482)
                     /gene="metK"
                     /locus_tag="JNZ57_000992"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HAY8827296.1"
                     /translation="MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACET
                     YVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPD
                     INQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW
                     LRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLT
                     SATTFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAA
                     YAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFF
                     DLRPYGLIQMLDLLHPIYKETAAYGHFGREHFPWEKTDKAQLLRDAAGLK"
     gene            complement(20786..21001)
                     /locus_tag="JNZ57_000993"
     CDS             complement(20786..21001)
                     /locus_tag="JNZ57_000993"
                     /inference="COORDINATES: protein motif:HMM:NF037550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827297.1"
                     /translation="MGITSAGMQSRDAECGERIFTRTVRQVKQQTTVHYFVSPPRPPV
                     KTNPQAKTLISTRLEVATRKKRRVLFI"
     gene            21137..21268
                     /gene="yqgB"
                     /locus_tag="JNZ57_000994"
     CDS             21137..21268
                     /gene="yqgB"
                     /locus_tag="JNZ57_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417414.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid stress response protein YqgB"
                     /protein_id="HAY8827298.1"
                     /translation="MKKKPVAQLERQHSLLENPCAYGLLSQFQAAIVVNCFTLNKII"
     gene            21277..23253
                     /gene="speA"
                     /locus_tag="JNZ57_000995"
     CDS             21277..23253
                     /gene="speA"
                     /locus_tag="JNZ57_000995"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HAY8827299.1"
                     /translation="MSDDMSMGLPSSAGEHGVLRSMQEVAMSSQEASKMLRTYNIAWW
                     GNNYYDVNELGHISVCPDPDVPEARVDLAQLVKTREAQGQRLPALFCFPQILQHRLRS
                     INAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLGLEAGSKAELMAVLA
                     HAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLNVVPR
                     LGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGSQ
                     MANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNE
                     YANNIIWAIGDACEENGLPHPTVITESGRAVTAHHTVLVSNIIGVERNEYTVPTAPAE
                     DAPRALQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHIGYSSGTFSLQERAWAEQ
                     LYLSMCHEVQKQLDPQNRAHRPIIDELQERMADKMYVNFSLFQSMPDAWGIDQLFPVL
                     PLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEYDPENPPMLGFFMVG
                     AYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELSDEGDTVADMLQYVQLDPKTLLTQF
                     RDQVKKTDLDAELQQQFLEEFEAGLYGYTYLEDE"
     gene            23390..24310
                     /gene="speB"
                     /locus_tag="JNZ57_000996"
     CDS             23390..24310
                     /gene="speB"
                     /locus_tag="JNZ57_000996"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HAY8827300.1"
                     /translation="MSTLGNQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDM
                     ATSGRAGGRHGPAAIRQVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMS
                     EKLQAHAEKLLAAGKRMLSFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCE
                     FDHGTMFYTAPKEGLIDPNHSVQIGIRTEFDKDNGFTVLDACQVNDRSVDDVIAQVKQ
                     IVGDMPVYLTFDIDCLDPAFAPGTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVA
                     PAYDQSEITALAAATLALEMLYIQAAKKGE"
     gene            complement(24516..25274)
                     /locus_tag="JNZ57_000997"
     CDS             complement(24516..25274)
                     /locus_tag="JNZ57_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311838.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HAY8827301.1"
                     /translation="MKIRALLVAMSVATVLTGCQNMDSNGLLSSGAEAFQAYSLSDAQ
                     VKTLSDQACQEMDSKATIAPANSEYAKRLTTIANALGNNINGQPVNYKVYMAKDVNAF
                     AMANGCIRVYSGLMDMMTDNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASA
                     GGIVGSLSQSQLGDLGEKLVNSQFSQRQEAEADDYSYDLLRQRGISPAGLATSFEKLA
                     KLEEGRQSSMFDDHPASAERAQHIRDRMSADGIK"
     gene            25552..27543
                     /gene="tkt"
                     /locus_tag="JNZ57_000998"
     CDS             25552..27543
                     /gene="tkt"
                     /locus_tag="JNZ57_000998"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HAY8827302.1"
                     /translation="MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDF
                     LKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPE
                     VGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMME
                     GISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDG
                     HDAASIKRAVEEARAVTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQ
                     LGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMP
                     SDFDAKAKEFIAKLQANPAKIASRKASQNAIETFGPLLPEFLGGSADLAPSNLTLWSG
                     SKAINEDAAGNYIHYGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAAL
                     MKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVE
                     RQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCAGQPELIFIATGSEVELAVA
                     AYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVG
                     LNGAIIGMTTFGESAPAELLFKEFGFTVDNVVAKAKELL"
     gene            27857..28300
                     /gene="cmtB"
                     /locus_tag="JNZ57_000999"
     CDS             27857..28300
                     /gene="cmtB"
                     /locus_tag="JNZ57_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IIA"
                     /protein_id="HAY8827303.1"
                     /translation="MRLSDYFPESSISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQ
                     AIKDSTINNGPYYILAPGVAMPHARPECGALKTGMSLTLLEQGVYFPGNDEPIKLLIG
                     LSAADADSHIGAIQALSELLCEEEILEQLLTASPEKQLADIISRG"
     gene            28328..29716
                     /locus_tag="JNZ57_001000"
     CDS             28328..29716
                     /locus_tag="JNZ57_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICB"
                     /protein_id="HAY8827304.1"
                     /translation="MENKSARAKVQAFGGFLTAMVIPNIGAFIAWGFITALFIPTGWL
                     PNEHFAKIVGPMITYLLPVMIGSTGGHLVGGKRGAVMGGIGTIGVIVGAEIPMFLGSM
                     IMGPLGGLVIKYVDKALEKRIPAGFEMVINNFSLGIAGMLLCLLGFEVIGPAVLIANT
                     FVKECIEALVHAGYLPLLSVINEPAKVLFLNNAIDQGVYYPLGMQQASVNGKSIFFMV
                     ASNPGPGLGLLLAFTLFGKGMSKRSAPGAMIIHFLGGIHELYFPYVLMKPLTIIAMIA
                     GGMSGTWMFNLLDGGLVAGPSPGSIFAYLALTPKGSFLATIAGVTVGTLVSFAITSLI
                     LKMEKTVETESEDEFAQSANAVKAMKQEGAFSLSRVKRIAFVCDAGMGSSAMGATTFR
                     KRLEKAGLAIEVKHYAIENVPADADIVVTHASLEGRVKRVTDKPLILINNYIGDPKLD
                     TLFNQLTAEHKH"
     gene            29731..>30079
                     /locus_tag="JNZ57_001001"
     CDS             29731..>30079
                     /locus_tag="JNZ57_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HAY8827305.1"
                     /translation="MKTKVAAIYGKRDVRLREFELPEITDNELLVSVISDSVCLSTWK
                     AALLGSEHKRVPDDLENHPVITGHECAGVIVEVGKNLTGKYKKGQRFVLQPAMGLPSG
                     YSAGYSYEYFGGNA"
BASE COUNT         7371 a         7535 c         7936 g         7237 t
ORIGIN      
        1 attcgcggtg aagtggagtt ggtgcggatt cgtgatgccg aagggcgaat tgcggcagaa
       61 ggggcgttgc cttatccacc tggcgtgctt tgcgtggtac ccggggaagt ctggggtggg
      121 gcggttcaac gttatttcct tgcactggaa gaaggggtaa atttgttgcc gggattttcg
      181 ccggagctgc aaggtgttta tagcgaaacc gatgcggatg gcatgaaacg gttgtacggt
      241 tatgtgttga agtaagaata aaaaaaacgg gtcaccttct ggcgacccgt ttttctttgc
      301 gtaattagtg gctaaccgtc tgtgtgcctg tcgggacacg aacgtgttta tatttgaaca
      361 tcgccatgaa cgcgaaggcc agaaccacgg agtaaccagc gaaaatcaac catacggtct
      421 gccagtcggt aatgccgttt tgggtgtaca tctcaacaac tttaccgctc acgatgccgc
      481 cgaggataca gccgaagccg ttagtcatca tcaggaacat cccttgtgca ctggcgcgaa
      541 ttgccgggct aacttctttt tcgacaaaca ccgaaccaga gatgttgaag aagtcgaatg
      601 cgcaaccgta aacgatcatc gacagtacca gcagtacagt accgaacgga gtcgggtcgc
      661 cgtaagcaaa cagcgcaaaa cgcaggatcc acgccacaat actgatcatc attacgttct
      721 taataccgta gcggcttaag aagaacggga tggtcagaat gaacagggtt tcagagatct
      781 gcgaaatcga catgatgatt gacgcatgct gcacaataaa gctgctggca aacatcggat
      841 ctttgtcgaa gctgtgcagg aaggtattac cgaacatgtt ggtaatctgc agttccgcgc
      901 ccagcagcat tgagaagata aagaagattg ccatacgctt gtttttaaac agcgcgaatg
      961 catcgaggcc cagcagggtt gtccagctct gattcgcttg ctgtttagca accggaatat
     1021 gcggcagagt cagggtaaac agaaccagaa tggcggaaag tgctgcgcca atatacagct
     1081 gcatgtggct taattcgaag ccagacaggc tcaccaccca cattgccatg ataaagccga
     1141 tggtgcccca gatacggatt ggcgggaagt cagtaacgat atccatcccg gcattttgca
     1201 ggcgatagta agagatggtg ttgattaacc caagcgttgg catataagca aacgagttaa
     1261 tcaatatcac aaggaacatc gcctccggtg tcgtgacctg tgccgccatg aacagcgtga
     1321 tagcgccaat ggtgtggcaa atggcatata cccatttcgc acttaaccat ttgtcggcca
     1381 caatccccag cagcgcaggc ataaagaccg ctgcgatacc cagtgagcta taaactgcgc
     1441 caatagaagc accgtcaaac ttcagggtaa caaacatata ggagccgagg gtcgtcagcc
     1501 aacttcccca cagacagaac tgcagaaaag agaggatttt cagctgcagc ttaagattca
     1561 tgttaatttc ctcacatcgt gatgcggatg agtgtttgaa aaagcacatt tgaccgtgcg
     1621 agatgatggg attctatcaa cttcgcggac tggttttttg ttacctgtgg caaataattg
     1681 caaacattcc caatttgcaa aacgaaattg tgatgtggat aacatttttg cccctgagca
     1741 tcgtcagggg cggttaatgg aattatcggc ggcggtagga tttttgcgcg gtattcactt
     1801 tataaagata acggcgagat tccgcagagg gatggcgggt cgtcagcgtc tgataaacat
     1861 cgcccggcgt catggtgtta ataatattgg cagcctgaat cttatcattc gaaaagactc
     1921 gcagcacgct gcctgcgccg ccgttatagg cggtgatgac ggcataacgc cgcgatgttg
     1981 ggttatcaat tccgccgaga taaacattgt tcagcatcgc cagatacgcg gtgccggtat
     2041 caatattgct ggcaggatca aacaagaaac tgcggctcgg cgtgccggat ttcccctgcg
     2101 agcggaacac atctttcccg gcagtatgtt gtaccacctg cattaatccc agcgcatcgg
     2161 aacggctgac cgcatacggg ttaaaggaag attcggtctg cataattgcc agaatcagcg
     2221 actcatcaac gccatatttc cgtgacgcct ggcggaccat gccgagatat ttgtgcgcac
     2281 gtttatcaag gtggttcggt accatgttaa tggtgacgct gtagatgata cgcagcccgt
     2341 tactgcggct ttgcagacgg tttttcagca gataatccgc gaagttgctt gcgcgacctt
     2401 cccagcgaat cggctgcccg gtgttgtcca ccacctgacc gtaaaggaaa ggttctttcg
     2461 aaatcgtaat atcatcaacg tcggaataga gatcgaccga actcggatcg tcacccatca
     2521 gcaacgtttt gataattgcc cggcgcaaat gcgcggcagg ttctgtcccg gcgatagttt
     2581 cgatagtaat cgtaccgtca tcgaagttga tgtggctgcg ggtctgatat tgatcggtgt
     2641 atttcacgta gtccttagga ccggcgatca ccacctcttt gaatccccag atgttctcaa
     2701 tattgtgggc aaattgcccc atcagaatat caaaaccgtt ggtatctttg acccaggctt
     2761 cgttataggt atcgcctttt ttggtcgtcg aacaggagat gagcaacggc gcaatcaaag
     2821 ccagcgcgag atattttttc atcattcagg gtgcgtgttg tgtttgtttt tatgcaagtt
     2881 gccggaggcg tgctccggca ctgtttttat tttttatctt ccggcgtata gccctcgata
     2941 tgcacctctt taccctcgaa caggaagttg accatctcct gctcaagcag cttgcggtgc
     3001 tcggcattca tcatgttgag tttcttttca ttaatcagca tggtttgctt gtgctgccac
     3061 tgcgcccagg cttctttgga gatctcgtta tagatgcgtt ttcccagctc gccggggtac
     3121 agctgaaaat cctgaccttc tgcttctcgt tgcaggaaag tacaaaaaat cgttctgctc
     3181 ataaatcatc ctctttatcg actcacgcgc taaaccggcg cgccagtgcg taactgctgt
     3241 aacaaacgct ccacgggagc cgccaggcca actgacggcg gttgcgctaa gttataccag
     3301 agcgcattgc cttcatccat gcagccggtg aatgacgaca cgggaagcca cataggcaca
     3361 atatctaagt ggaaatggct gaaggtatgc cgaaacgcgg tcagttgcgt caggttatcg
     3421 gcagcaatct gccgttgcgc cagccactgc cgcaaacttt cttcgtcggc aaactgcggg
     3481 aaacagtata aaccgcccca caatccgctc ggcggacgct gcgccagcaa tacttcatct
     3541 tcgtgctgta acagcaaaaa gtagccggtg cgctccggca gcgtctgttt cggttttttg
     3601 cccggataaa gcgaccagct attattggcg gcggcaatac atccgttttg tagcggacag
     3661 agcgaacatt tcggcttcga gcgcgtacaa atcatcgcgc ccaaatccat catcgcctga
     3721 ttaaaccgtt ccacgccgac cgcgggcgtc acctgctcgc tcaaactcca taatttattc
     3781 tcgacctctt ttttcccagg ccagccgctt acagcatagc agcgcgccag cacgcgtttg
     3841 acgttaccgt cgagaatcgg aaagtgctta cccagagaaa gcgagagaat cgcgcctgcg
     3901 gtggaacgcc cgacgcccgg taacgccgcg acttcttcaa aggtttccgg gaatttaccg
     3961 ccgtgtaagg tcgccacttg ttgtgccgct ttatgcatat tgcgcgcgcg ggcgtaatag
     4021 ccaagcccgg tccacaagtg gagaacttcg tcgagcggcg cattggcgag atcggtcacc
     4081 gtcgggaagc gcgccataaa gcgttcaaaa taggggataa cggtcgcaac ctgagtttgt
     4141 tgcaacatca cttctgagag ccatactttg tagggcgtct tgtcaatttg ccagggcagc
     4201 gtttttcgcc cgtatttatc gtaccagtcc agaatctggg ctgaaaattg cgacgcttgc
     4261 atggtcaccg aattcactgt tgttgggggc aagattgcag cacagcgacg gcagggtgta
     4321 aaccggaact ttccgcagcc acggccttat catgcttgca tccggcaact aactttggat
     4381 aatgcccgtt ttcagaacac tttcacaagc gactaaatct ttatgaaaaa cgacgtcatt
     4441 tcaccggaat ttgatgaaaa cggccgccca ctgcgccgta tccgtagttt tgtgcgccgc
     4501 caggggcgac tgaccaaagg ccaggaacat gcgctggaaa actactggcc ggtgatgggc
     4561 gttgagttca gcgaagatat gctggatttc cccgcgcttt ttggccgtga agcgccggtg
     4621 acgcttgaga ttggttttgg catgggggcg tcgctggtgg caatggctaa agatcgccct
     4681 gagcaggact tcctcggcat tgaagtgcat tcaccgggcg ttggtgcgtg cctggcttct
     4741 gcgcatgaag aaggtttaag caacctgcga gtgatgtgtc acgatgcggt tgaagtgctg
     4801 cataaaatga ttcctgacaa ttcattgcgc atggtgcagc tctttttccc tgacccgtgg
     4861 cacaaagcgc gccataataa acgccgtatc gtacaggtgc cgtttgccga actggtaaaa
     4921 agcaaactgc agctgggggg cgtattccat atggcgaccg actgggaacc ttatgcggaa
     4981 catatgcttg aagtgatgtc ttctattgac ggttataaaa acctgtcaga gagcaatgat
     5041 tacgtaccgc gtccggcatc acgtccggtg acgaaatttg aacaacgtgg tcatcgtctt
     5101 ggtcacggag tatgggactt aatgttcgag agggtgaaat aatggcaaag aaccgtagcc
     5161 gtcgtctgcg taaaaaaatg cacatcgacg aattccagga attaggattt tcggtggcat
     5221 ggcgattccc ggaaggtaca tcggaagaac agattgataa aaccgttgat gattttatta
     5281 acgaggttat cgaaccgaac aaactggcct ttgacggcag cggttatctg gcctgggaag
     5341 gtctgatctg catgcaggaa atcggcaaat gcaccgaaga acatcaggcg attgtgcgta
     5401 agtggctgga agagcgcaaa ctggatgagg tacgcaccag cgaacttttc gacgtttggt
     5461 gggactaaga aagcatacgg gcgatgacaa atgcaaaact gcctgatgcg ctacgcttat
     5521 caggcctgga aagatgcacg atcgagtagg cgggataagg tgtttacgcc gcatccggca
     5581 tggaaaacgc gtactttgtt atcaatctgg ggccagcaaa tgctggcctg attttttctt
     5641 gagggaagac tatgatgcgc aaaatgctgc tggcggcagc actttcagtg acggcaatga
     5701 ccgctcacgc cgactaccag tgcagcgtca cgccgcgtga cgatgtgatt gtcagcccgc
     5761 aaaccgtgca ggtgaagggc gaaaacggca atctggtgat cacgccagac ggcaacgtga
     5821 tgtataacgg taagcaatat tccctgaatg ccgcccagcg cgagcaggcg aaggattatc
     5881 aggctgaact acgcagcacg ctgccgtgga ttgatgaagg cgcgaaaagc cgcgtcgaaa
     5941 aagcccgtat tgcgctggat aaaattatcg ttcaggagat gggcgaaagc agcaaaatgc
     6001 gcagccgtct gaccaaactt gatgcgcagc tgaaagagca gatgaaccgc attatcgaaa
     6061 cgcgcagcga tggcctgacg tttcactata aagccattga tcaggttcgc gccgaaggcc
     6121 agcaattagt gaatcaggca atgggtggaa ttttacagga cagcattaat gaaatgggcg
     6181 cgaaagcggt gctgaaaagc ggcggtaacc cattacagaa tgtgctggga agcctggggg
     6241 ggctgcaatc ctcaatccaa accgagtgga aaaagcagga aaaagatttc cagcagtttg
     6301 gcaaagatgt ttgtagccgc gttgtgactc tggaagatag ccgcaaagcc ctggtcggga
     6361 atttaaaata atcctctatt ttaagacggc ataatacttt tttatgccgt ttaattcttc
     6421 gttttgttac ctgcctctaa ctttgtagat ctccaaaata tattcacgtt gtaaattgtt
     6481 taacgtcaaa tttcccatac agagctaagg gataatgcgt agcgttcacg taactggagg
     6541 aatgaaatgg agtttttcaa aaagacggca cttgccgcac tggttatggg ttttagtggt
     6601 gcagcattgg cattacccaa tatcaccatt ttagcaaccg gcgggaccat tgccggtggt
     6661 ggtgactccg caaccaaatc taactacaca gcgggtaaag ttggcgtaga aaatctggtt
     6721 aatgcggtgc cgcaactaaa agacattgcg aacgttaaag gcgagcaggt agtgaatatc
     6781 ggctcccagg acatgaacga taatgtctgg ctgacactgg cgaaaaaaat taacaccgac
     6841 tgcgataaaa ccgacggctt cgtcattacc cacggtaccg acacgatgga agaaaccgct
     6901 tacttcctcg acctgacggt gaaatgcgac aaaccggtgg tgatggtcgg cgcaatgcgc
     6961 ccgtccacgt ccatgagcgc agacggtcca ttcaacctgt ataacgcggt agtgaccgca
     7021 gctgataaag catccgctaa tcgtggcgtg ctggtggtga tgaacgacac tgtactggac
     7081 ggtcgcgatg taaccaaaac caacaccacc gacgtagcga ccttcaagtc tgttaactac
     7141 ggtcctctgg gatacattca caacggtaag attgactacc aacgtacccc ggcacgtaag
     7201 cacaccagcg atacgccatt cgatgtctct aagctgaatg agctgccgaa agtcggcatc
     7261 gtttataact acgctaacgc atccgatctt ccggctaaag cactggtaga tgcgggctat
     7321 gatggcatcg ttagcgctgg tgtgggtaat ggtaacctgt ataaatccgt gttcgacacc
     7381 ctggcaaccg ccgcgaaaaa cggcactgca gtagtgcgtt cttcccgcgt accgacgggt
     7441 gctaccactc aggatgctga agtggatgat gcgaaatacg gcttcgtcgc ctctggcacg
     7501 ctgaacccgc aaaaagcgcg cgtcctgctg cagctggctc tgacgcaaac caaagatccg
     7561 cagcagatcc agcagatctt caatcagtac taatcacctc gccccggtat cgtgccgggg
     7621 ctttttcact tcagacttac gtccattgcc aattttcatt accctaatga taatcaccgg
     7681 aataaattat tccgcgtgag gtttttcggg tgaaaaagca atggattgtt ggcacggcac
     7741 tgcttatgtt gatgactggt aatgcctggg cagatggcga accgccaact gaaaatatct
     7801 taaaagatca attcaaaaag cagtatcacg gcattctcaa gcttgatgct atcaccttaa
     7861 aaaatcttga tgctaagggt aatcaggcca cctggtcagc ggaaggcgat gtctcttcca
     7921 gtgacgatct ctatacctgg gtcggtcagt tggcagatta cgaactgctc gaacagacct
     7981 ggacgaaaga taaaccggta aaattctcgg cgatgttaac cagtaaagga acgcccgcgt
     8041 ctggctggtc ggtgaacttt tactcttttc aggcggcagc cagcgatcgt gggcgggtgg
     8101 tcgacgatat caaaacgaat aataaatatc tgatcgtgaa tagcgaagat ttcaattatc
     8161 gctttagtca gcttgaatct gcgttgaata cccagaagaa ctcgattcct gcgctggaaa
     8221 aggaagtgaa agcgcttgat aagcaaatgg tggcggcgca gaaagcagcg gatgcatatt
     8281 ggggaaaaga tgcaaacggt aagcaaatga cccgcgaaga agcctttaaa aaaattcacc
     8341 aacagcgtga tgagtttaat aaacagaacg atagcgaggc gttcgcggtt aaatatgaca
     8401 aagaggttta tcaaccggcg attgcggcat gtcataaaca gagtgaagag tgttatgaag
     8461 tgccgattca gcagaaacga gatttcgata tcaacgaaca acggcgacag acttttctgc
     8521 aatcacaaaa actcagccgt aaattgcagg atgactgggt aacgctcgaa aaagggcaat
     8581 atccgttaac gatgaaagtt tcagaaataa acagtaaaaa agtcgcgatt ttgatgaaaa
     8641 ttgacgatat caaccaagct aatgaacgct ggaaaaaaga taccgaacaa ctgcggcgca
     8701 atggggtgat taagtaagtt tgatatagtg cacgatttgt agcaggatgc ggcgttgacc
     8761 ccgcatccgg caatacaagt ttactcagcc agaaaaagct ccagcagcga atttaaaaac
     8821 agcttcccat gttccgttat ctgccagtaa tccgcacatt ctgtgagata accctgggca
     8881 atcgcctcgt ctaactgtgg gcgaatcaca tcttcgcaaa gcccggtata cgcactaaac
     8941 tctgcgcgtg gcgcggcctc cagcaagcga aagcggttca taaagaactc aaacggctta
     9001 tctgcggctt cgacatcacg ctggctttcc agataccttc cttgcataaa accacgagga
     9061 tgacgcgttt tagtggtacg cagaatgcgc ccatccggga aggtgacttt gccgtgcgcg
     9121 ccgcagccaa taccgatgta gtcaccaaat cgccagtagt tgagattgtg ctggcactga
     9181 taaccgggtt tggcgtaagc ggaagtttca tattgctgat aacccgctgc ggttaataac
     9241 tgatgcccct gttcgaaaat atcccacagc gcgtcatcgt ccggcagcac cggtggtcgc
     9301 gaaccaaaca gcgtattggg ttcgatggtc agttgatacc aggaaagatg cggcggattc
     9361 agttcaatgg cctggcgtag atcgccaagc gcctcttcca gtgattgatc cggtagtcca
     9421 tgcatcaaat caaggttaaa gctacgtaac cctaaaccgc tcgccagctt tgccgctcgt
     9481 ttcgcttctt gcgggccatg aatgcgccca agtcgtttca gcttttcttc gctaaaactc
     9541 tgcacaccaa tagagatgcg gttcacacca gcacgctgat aatcgacaaa gcgatcggct
     9601 tctaccgtac cagggttcgc ttccatagta atttctgcat ccgctgccag cggcaaacgc
     9661 gcacgcacgc cgtccagcag cgtttgcatc gccgggccgg aaagcaggct cggcgtacca
     9721 ccgccaataa agattgtctt tacttcacgg ccctgagcgt aagccacatc attgtccaga
     9781 tcgcaaagca gatgctgaac ataatcgtcg tgcggcactt ctcctttcaa cgcgtgagag
     9841 ttgaaatcgc agtacgggca tttctgcacg caccacggga tgtgaatgta gagactcagc
     9901 ggcggtaatt taaccattac gtaaagcgtc cagcagcagt ttcaacgcct gaccacggtg
     9961 ggaaatggcg ctcttttctt cgcgggtcag ttcggcggcg gttttccctt cggaaggtac
    10021 gaagaagatt ggatcataac caaagccacc agtgcccgct ggttcgcgag taatcacgcc
    10081 cggccagctg ccgtggcata ccagcggagt cggatcttcc gcgtgacgca gatataccag
    10141 cacgcagtgg aaacgtgcct gacgttggtc gtccggtacg tctttcagtg tttccaacag
    10201 tttttgcaga ttcttttgat cggtcgcgtc ttcaccggaa taacgcgcgg agtaaatacc
    10261 cggcgcgcca cccagcgcat ctaccgccag accagagtcg tcggcaattg ccggtaaacc
    10321 ggtcactttt gccgcatggc gcgctttcag aatcgcgttt tcgataaagg ttaggccggt
    10381 ttcttcagcg gaatcaacgc cgaggtctgt ttgtgccacg atatcaagac caaagtcgct
    10441 aagcagcgac gccagctcac gcactttacc ggcattgccg gttgcgagga caactttttg
    10501 cataggatac ctaattaatt aacgccgcga tttctggcgg gatttgttgc ggattaatga
    10561 ttttaatttg tttgtggcgg ccaagttcgc ctttttcaat caccacctgg cttttggcaa
    10621 cccggaattg cttaccgaga aacttcacca gatgactgtt ggcctggccg tcaactggcg
    10681 gcgcggtaat ggcgacttta acttcgtcgc catgtaaacc gacaatagaa tcacggctgg
    10741 ctttcggctg aatatagagc cgtaaaacca gaccgtcatc attaactgtt acggcattca
    10801 taacgccatc cacagccccg gcagcaggat gtttccggtt gcctgtaata cttctgcgac
    10861 acccatattg atgacataca gcagcagaac gaggatcatc ggcgagaaat caatcccacc
    10921 cattgccggt agcaagcggc gaatcgggcg cagcagcgga tcggccagct gaatcagcac
    10981 gtattcaatc gggctacgac cctggcttac ccagctcata atcgccatca ccagcaggac
    11041 ccagaaaatc agcaagccga tggttttcag cagaatcagt aaaccggcaa tccagatgat
    11101 tggcaggaag gtcaccactt taaacagcac aatggctttg ataaaactga gaatataggc
    11161 aaccagcagc gaggcgctgt caatgggacc cattgccgga ataacgcggc gcagtggccc
    11221 gataattggc tgcgttacct tcactacaaa ctgtgagaag gggttgtaaa aatcacaatg
    11281 agcccactgc atccagatgc gtaataacag caccatggta tacagctcaa tgaccgttga
    11341 aagcaggaaa gtcaacgtat tcatggcgtt cctttaattc cttatttttt agagtaatca
    11401 cgcgcaccaa aaattgcagt gccgatacga accatcgtgc tacctgccgc aatggcggct
    11461 tccatatcgt ccgacattcc cagagagagc gtgtcgatat gcgggtagcg cgttttcagt
    11521 ccggcaaatg ctacagccat ttggcgtgca acttcaaact gccttacata ttctgactca
    11581 ggcgcaggga ttgccatcag cccgcgcaga cgtaaacgcg gtagttcagc gaccgccgct
    11641 gccagctcgt ccagttctgc cagttgaatc ccagacttac tgttttcatc actaatatta
    11701 atttgaatca gtacgttaag agggggaagt tctgccgggc gctgatcgtt gaggcgggta
    11761 gcaatgcgca aacggtcgat ggtatgacac cagtcgaaat gctctgccac caggcggctt
    11821 ttattagact gcaacgggcc aataaaatgc cattctaatc ctgttacgcc cagttcctga
    11881 aagtggcgaa ttttatctac cccttcctga acgtagtttt caccaaattg acgctgcccg
    11941 gcatcaatgg cttctgcgat ggcgctcgca ggttttgttt tactgactgc aagcagcgta
    12001 atttcttctg gagaacggcc gcaacgcgtt gcagccgctg agattttgtc ccggacctgt
    12061 gccaggttat gcgcaatatc gttcattttc cgaggatctt agtatgaata tggaagaaat
    12121 tgtggccctt agtgtaaagc ataacgtctc ggatctacat ctgtgcagcg cctggcccgc
    12181 acgatggcgc attcgcgggc taatggaagc tgcgccgttt gatgcgccgg acgtcgaaga
    12241 gctactgcgg gagtggctgg atgacgatca gcgggcaata ttgctggaaa atggccagct
    12301 ggattttgcc gtgtcgctgg cggaaaacca gcgattgcgt ggcagcgcat tcgcgcaacg
    12361 gcatggcatt tcgctggcgt tacggctgtt accttcgcac tgcccgcagc tcgaacagct
    12421 tggcgcacca acggtattgc cggaattact caagagcgag aatggcctga ttctggtgac
    12481 gggggcgacg gggagcggca aatctaccac gctggcggcg atggttggct atctcaatca
    12541 acatgccgat gcgcatattc tgacgctgga agatcctgtt gaatatatct atgccagcca
    12601 gcgatgtttg atccagcagc gggaaattgg tttgcactgt atgacgttcg catcgggatt
    12661 gcgggccgca ttgcgggaag atcctgatgt gattttgctc ggagagctgc gtgacagcga
    12721 gccaatccgt ctggcactga cggcggcaga aaccgggcat ttggtgctgg caacattaca
    12781 tacgcgtggt gccgcgcagg cagttgagcg actggtggat tcatttccgg cgcaggaaaa
    12841 agatcccgta cgtaatcaac tggcaggtag tttacgggcc gtgttgttac aaaagctgga
    12901 agtggataaa caggaaggac gcgtggcgct gtttgaatta ttgattaaca ctcccgcggt
    12961 ggggaatttg attcgcgaag ggaaaaccca ccagttaccg catgttattc aaaccgggca
    13021 gcaggtgggg atgataacgt ttcagcagag ttatcagcag cgggtggggg aagggcgttt
    13081 gtgacgttgc catgcccgat gcgcaagttt atagggccta taaaggcaat aaatgtctga
    13141 tgcgacgcta acgcgtctta tcagacctac agccgctgcc agatgtgtgc tggataaggc
    13201 gttcacgccg catccggcaa gatggcggta acgactatcc gccaggcttt tagatcgcct
    13261 taatatccct gctcgaaata gctttcgaga ataataaccg cagaggctga gtcgactttg
    13321 cctttgttga gcgcccgata gccgccctgt tcaaacagac cggaacgggc ttccacggtg
    13381 ctaagacgtt cgtcatggag ctttacttca acaccgaaac gaccatgaat acggttggca
    13441 aatttacgcg ctctggcagt caatggttgc tcggtgccgt ccatattcag cggcaaaccg
    13501 acgatgattt cgtccggctg ccactctttc agtaaacgtt cgatgaggtt ccagtccggc
    13561 gtaccgtcct gtgctttaat tgcaggcaaa gggcgagcag tgccggtaat gcgttggccg
    13621 accgctacgc caatgctttt ggtgccgaag tcgaaggcga gtaaggttcc actcatcagg
    13681 cgtgccctgc cacaccaggc atggtgagaa tatccacacc aatcagtttt gccgcctcgc
    13741 gccagcggtc ggcaatcggc gttttgaaca gaatattcag atccgccggg gccgttagcc
    13801 acgcgttatc gagaatttct tgttccagtt gacctttttc ccaggaggca tagcccagag
    13861 ccaccaatac gtcagacggt tgtttatcgg tgccgagcgt ttccagcaca tcgcgggaag
    13921 tggtcatcac cgtgttgtct gaaatgcgaa tgctggaagc aaaattggag ggcggagtat
    13981 gcaaaataaa cccgcgatct tcagccagtg ggccgccgag cataaccggt ttatccagac
    14041 ggattgattc atcacgcggc tccggcgtga tcttcagctt ttccagaatc ccttcaattt
    14101 tgagattttc cagcggcttg ttgacgatga tccccattgc accattggta ttatgttcgc
    14161 aaatgtagac cacggaacga cggaaaatcg gatcctggag agcaggcatg gcaataagaa
    14221 agtgatgctg taaattcatt gtcagaggtt ctgtttcctg gttcaaaaaa gcaacagcgc
    14281 ccagtatgcg tggaaagaag ggcgctgtca ctcagagtct caacgagatc cttctcgcta
    14341 aggtgggtta ctgctgctgt aaacgtgctt cgatggcatc cattaacatt ccggtgatcg
    14401 acaccggaaa ctctgcttca atctcacgaa tacaggttgg gctggtgacg ttaatttcag
    14461 tcagacggtc gccgatgata tccagaccaa caaaaatcag ccctttttct ttcagcgtcg
    14521 gcccgatctg acgggcgatt ttccagtcac tttccgtcag cggccgaggt tcaccgcgac
    14581 caccggcagc cagattgcca cgggtttcgc ccccctgcgg aatacgcgcc aggcagtacg
    14641 gtaccggctc gccatccacc accagcacgc gtttgtcgcc atctttaatg gctggcaggt
    14701 aattttgcgc catgcagtag cgagtgccat gctcagtcag ggtttcggca atcacgccga
    14761 ggtttggatc gccttctttc acgcggaaaa tcgacgcgcc gcccataccg tccagcggct
    14821 taagaatgat gtcgctgtgt ttctcccaga acgcttttag ctgcgcttta ttgcgcgtaa
    14881 ccagcgtttc tggcgttaag tcagagaacc aggcggtaaa cagtttctcg ttacagtcgc
    14941 gcaggctctg cggcttgtta acgatcagcg tccctttctc ttcggcacgt tccagaatat
    15001 aggtcgcgta gataaactcg gtatcaaacg gcgggtcttt acgcatcagg agcacatcga
    15061 gatcggccag cggcagatcc tgttcaccga cgaacgaaaa ccactcttcg tagttctgct
    15121 tcacgttcag cgtgcgggta tgggcgcggg cttcgccatt gatcagatac agatcgccca
    15181 tctccatata gtgaagttcg taaccacgac gctgtgcttc cagcaacata gcgaaactgg
    15241 aatctttctt gatgttgatg tttgcgatgg ggtccatcac gatgccgagc ttgatcatta
    15301 ttcttctccg ttagcccaaa tcgccaaatc gtacttgtag cgcggtaatg gcggtgagcg
    15361 cagttgtctc tgtacgcaaa acgcgaggtc ccaacaggat atcagtaaat tgatagcggg
    15421 cagtcatggc aatttcatct gccgataaac cgccttccgg gccaatcagc aggcggacgc
    15481 gttcaaccgg taacggcaac gtattgatgc tgttactggc gcgcgggtga agattcagtt
    15541 tcagtccttc atcctgctct gcacaccagg cttccagatc catcgctgga cggatttccg
    15601 gcacccggtt acgaccacac tgctcacagg cagcaattgc aatcttctgc cactgctgga
    15661 gcttcttgtt cagacgttca ctatccagtt taacgccgca gcgctcagaa aaaagtggcg
    15721 taatgaggct tacaccgagt tcgatcgatt tctggatcgt aaattccatt ttttcaccac
    15781 gcgacatcac ctgaccgagg tgaatatgca gcggagattc gcgatcgtcg atcttgcctt
    15841 ccagcacctt cacttccacg ctttttttgc tggcgctggt aatttcggcg tcaaagacct
    15901 ggttgctacc gtcaaacaat tgcaacgcct gccccggccc catgcgcagt acgcgcccga
    15961 tatggttggc ggcatcttcg caaagcgcga tgtgagaatg gctggtcagt ggttcaggat
    16021 gataaatgcg ggggatacgc atagttaaaa atccgcgtcg tctccccacg cggttgtacg
    16081 cgtggggtag gggttaacaa aaagagtccc gctagtgtag gttagctctt tcgcgcctgg
    16141 caagcgcgtt gcacatacgg gttatgattg ccttgcacct tcgcgatgcg ttcatcgcgc
    16201 tcgcactccc agtcggtaac cggatacatc ttgttccatg cgttgaacag ctgcgtttgc
    16261 tggcgagaga gtgtcaggtt gtattggtcg cgcatataga agtaggtgcg cgcaatggca
    16321 ccgcgtgcac gcgctggtgg ttcggcagct ttttctttga aatcgacctt catggcgcat
    16381 tgaccgtact ggccttcgcc gccattccac tggctgtaca taaagttgcc gcgatcgcca
    16441 ttcacctcac cgactgacgg ctgcaggtta tgcatatcgc tttccatctt gcgatagacc
    16501 ggatctttag cgcagttttt acgtccaccg tcctgccagc actggcgctg gtgaccgaac
    16561 tgccaggcgg gaacgacgtg ttcccactct acgcggctgg ctcggttttc atttttgcgc
    16621 acctgatagc cgcacgattg cagatcaaca acgccttttt tgccctgcca gttaatttta
    16681 catccgcaat aaaacgtacc gggcgcgtca gcgtggactt ttaccgccgc ggctttcgcc
    16741 tgagaaaaac tattgatacc ttcggccaac gccgggccgg aaaatgctgc gctcagtacc
    16801 accgcagcaa tagacaaata acggtacatc acttactccg tgttaaaacg agccagcaac
    16861 gtagcgaaag ttgttttggt atgcaatcag ccagatcagg aaagttcctg atagttcaga
    16921 tggttatttt gcgaccagtt gttcgccgca gtgaacacag cgatagacgg cttcgccacg
    16981 aactacgcga ttatggcggc gtacggtaag ctgatgctcc tggcacttgc agcggtaggg
    17041 gaaggtgttg cgacgcacgg attgcagttc gaactgatgc gtacgacggg cgggaacacc
    17101 cagcacgttt tccatcatcc acttccactc tttgccatgt ggtgctacgc gcccgaaatg
    17161 tttccatacc agcaaatgtg ccagttcgtg cggcaccact tcttcaataa aggcttcact
    17221 gttttccaac agcaaaacgg gattgaggcg gattttatag ctttccagcc aggctgttcc
    17281 ggcggaggtg ccgcgctggg tataagagag ttttggctcc gggtagttac gccccaattt
    17341 caggttagcc tgggcgagtt tttcccgcag gcgacgcata acggcctgtt ggatggcgat
    17401 agggagacgg gatgttttca tagcggcaga ggatagagcg aagaaaagat gactgcaaga
    17461 ggtggcttcc tccgcgatgg gaggaagctt ggggagatta atcgtgagcg cctatttcgc
    17521 gcagtttacg acctttcatc agattacgtt caatatgttc cagcgaaacg tgtttggttt
    17581 ccggtaccag ccacaatgtc agcaggataa acagtacgtt cagagccgca tacacccaga
    17641 aggtgttggc gttacccagt gtgttgagca tggtcaggaa cgttgcgcca acgatcatgt
    17701 tggcaatcca gttggtggcg gtggagcagg tgatgccaaa atcgcggcct ttcagcggct
    17761 gaatttcgga gcacagtacc caaatcagcg gaccggcact catggcaaaa ccgacaataa
    17821 acatcagcag catggcgatg gcgaaatact gcgctgacgg agagtgaata ccgatatgca
    17881 tcattgtacc gagtacgccc atgccagcag ccatcaccag gaagcccagc gttagcgttg
    17941 gtttacgtcc ccagcggtca acaaggccga ttgcgataaa ggtggcaagt acgttggtca
    18001 ggccgacaat cactgtcccc cacatttgct cggtagtgtt ggtataaccc gccagttcga
    18061 agattttcgg cgcgtaatac atgatgacgt tcatcccggt gaattgctgc attacctgta
    18121 acagtacgcc aaggaacacc gcgcggcgga agttgctatt ctctttaaac agcgcccagc
    18181 cactctgttt aacctgcaaa ctttcacgga tttcatccag ttcgcgtttc gcttccgcgc
    18241 tggtgtcacg caggcgtagc agcacgcgtt cggcatcaac aaaacggcgt ttggcggcaa
    18301 accaacgtgg gctgtctggc aggaagaaga caccaatcag cagcaaaatt gccgggatga
    18361 taatcacacc cagcatccag cgccatgcac cggtgtagct gaaggcggta tcagaaagat
    18421 aagcaccgag gatcccgata gtgatcatca actgatacat cgagatcata ctgccacgaa
    18481 ttttttccgg cgcaatttca gagaggtaca gcggtgcggt ataagaggcc acacccaccg
    18541 ccagccccag tagaacgcgg gaaagaatca gtacttcaac gtttggcgca gccgcagaga
    18601 acagcgaacc ggcaacaaac aaaattgcgc cgatcatcag gctctttttg cgcccgagtt
    18661 taaaggagag ccagccgctg cccaccgcac cgactgccgc accgaacatc atggagctta
    18721 cgacccattc ttgcgtgtgc gaagtaatct ggaattcatc tgcaataaac ggcagtgcgc
    18781 cagcaattac accgatatcc aggccaaaga gtaatcccgc cagagcggca aggaagcaga
    18841 cgaaaaacgt cattgccttg tttgaccgcc cctgtttttt agcgtcaggc atgatgccct
    18901 ccaatatggt tattttttat tgtgaattaa gataggtgag tatgacgtaa aaagatgtga
    18961 agcaaatcac attagtgtaa tcgcttacac taacatttat cttagttatg gtttaagtgc
    19021 atgaaaataa ttgagttata tcatcataga ttaaacgctg ttatctgcaa ttaagacttt
    19081 actgaaaaga aatgtaacaa ctgtgaaaac tgaataataa tatgaaaata ttacaaatat
    19141 ttggctggtg ttattggtgt aatcggtttc agtagtgatg ataatttgcg ataaaacgtg
    19201 ttgaggaaga atgatgttat tgtgcgggca gctttttgcc ggatgcggcg tgaatgccta
    19261 tccaccgcgg tgaggtaaaa gaaaaaggcc agcgcgaggc tggcctttga aagcaggtga
    19321 agaaagatta cttcagaccg gcagcatcgc gcagcagctg cgctttgtcg gttttttccc
    19381 acgggaaatg ttcacgacca aagtgaccgt atgctgcggt ttctttgtag atcgggtgca
    19441 gcagatccag catctgaatc agaccgtatg ggcgcaggtc gaagaactca cgtaccagca
    19501 gagtcagttg ttcagaaggc actttctcag taccgaaagt ttctaccatg atggaggtcg
    19561 gttcagccac gccgattgcg taggaaacct gaatttcaca acgatcggcc aggccagcag
    19621 caacgatgtt tttcgcgaca taacgtgctg cgtaggctgc ggaacggtcc acttttgatg
    19681 gatctttacc agagaatgct ccgccaccgt gacgtgccat gccgccgtag gtatcaacga
    19741 taattttacg accagtcaga ccgcagtcac ccatcgggcc accgataaca aaacgaccgg
    19801 tcgggttgat gaagaatgtg gtggcagaag tcagccattc agcgggcaga attggcttga
    19861 tgatctcttc cattaccgct tcttgcagcg atttctggtc gatctcttca gagtgctgag
    19921 tggaaagcac gacagcatca ataccaacga ttttgccgtc gtcatactgg aaagtcacct
    19981 ggcttttcgc gtccgggcgc agccacggca gagtgccgtt tttacgcact tcagcctgac
    20041 gctgtaccag acggtgtgca taggtgatag gtgctggcat cagcacgtcg gtttcattag
    20101 ttgcgtagcc aaacatcaga ccttggtcac ccgcgccctg ttccagcgga tcggcacggt
    20161 caacgccctg gttgatgtca ggagactgtt tgccgatagc gctcagaacc gcacaggagt
    20221 tagcgtcaaa gcccatgtcg gaatgcacat agccaatttc gcgaacggtg ttacgggtga
    20281 tctcttcgat gtctacccag gcgctggtgg tgatttcgcc gccaactaaa accattccgg
    20341 tttttacgta ggtttcgcaa gcaacgcgtg ctttcggatc ctgttcgagg atcgcgtcta
    20401 aaacggcatc agagatttgg tcagcaattt tgtcaggatg cccttcagag acggactcgg
    20461 acgtaaaaag gtgttttgcc atatttaata tcacctaaag agaatttggt tagctcaaac
    20521 tgttgtgtgg attttctgtg gtagcggatc ctaccacgac tctgcaggtt aaaaacactg
    20581 gcagtctgag tgttaatcgg tatggatgga ttaacatctg gatggctatt ttaggtcaat
    20641 tcttcacccg atttccactt ttttttgaat cgtgtctcat tctgttaaaa acgtggctgg
    20701 aaatttttcc tgacaatgcc ggcattctgc gtatttatat tttgcaattt tctgccattg
    20761 tggggtataa aacgcagcgc gcggcttaaa taaaaagcac acgacgtttc tttcgtgttg
    20821 ccacttccag ccgggttgaa atcagagttt tggcttgtgg gttcgtctta acaggcggcc
    20881 gtggaggtga tacgaaataa tgaaccgtag tctgctgctt aacctgtctc accgttctgg
    20941 tgaagattcg ttccccgcac tctgcatctc tgctttgcat acctgccgat gttataccca
    21001 tctcggcgct tctcaggatt caagagctgg ttacagttac tgaggactga acaagggcgc
    21061 tcttgtaaaa acaagagttt tctcgtggtt tcgccgaact gtcacactta cgttcggtta
    21121 tgtgcttaat aatgttatga aaaagaaacc ggttgcgcag ttggagcgtc agcattcact
    21181 gctggaaaat ccatgtgctt atgggttgtt atcgcagttc caggctgcga tagtcgttaa
    21241 ctgttttaca cttaataaaa taatttgagg ttcgctatgt ctgacgacat gtctatgggt
    21301 ttgccttcgt cagcgggcga acacggtgta ctacgctcca tgcaggaggt tgcaatgagc
    21361 tcccaggaag ccagcaagat gctgcgtact tacaatattg cctggtgggg caataactac
    21421 tatgacgtta acgagctggg ccacatcagc gtgtgcccgg acccggacgt cccggaagct
    21481 cgcgtcgatc tcgcgcagtt agtgaaaact cgtgaagcac agggtcagcg tctgcctgca
    21541 ctgttctgtt tcccacagat cctgcagcac cgtttgcgtt ccattaacgc cgcgttcaaa
    21601 cgtgcgaggg aatcctacgg ctataacggc gattacttcc ttgtttatcc gatcaaagtt
    21661 aaccagcacc gccgcgtgat tgagtccctg attcattcgg gcgaaccgct gggtctggaa
    21721 gccggttcca aagccgagtt gatggcagtg ctggcacatg ctggcatgac ccgtagcgtc
    21781 atcgtctgca acggttataa agaccgcgaa tatatccgcc tggcattaat tggcgagaag
    21841 atggggcaca aggtctatct ggtcattgag aagatgtcag aaatcgccat tgtgctggat
    21901 gaagcagaac gtctgaatgt cgttcctcgt ctgggcgtgc gtgcacgtct ggcttcgcag
    21961 ggctcgggta aatggcagtc ttccggcggg gaaaaatcga agttcggcct ggctgcgact
    22021 caggtactgc aactggttga aacgctgcgt gaagctgggc gtctcgacag cctgcaacta
    22081 ctgcacttcc acctcggttc gcagatggcg aatattcgcg atatcgccac gggcgttcgt
    22141 gaatccgcgc gtttctatgt ggaactgcac aagctgggcg tcaatattca gtgcttcgac
    22201 gtcggcggcg gtctgggcgt ggactatgaa ggcacccgtt cgcagtctga ctgctccgta
    22261 aactacggcc tcaatgaata tgccaacaac atcatctggg cgattggtga tgcgtgtgaa
    22321 gaaaacggtc tgccgcatcc gacggtaatc accgaatcgg gtcgtgcggt gactgcgcat
    22381 cacaccgtgc tggtgtctaa tatcatcggc gtggaacgta acgaatacac ggtgccgacc
    22441 gcgcctgcag aagatgcgcc gcgcgcgctg caaagcatgt gggaaacctg gcaggagatg
    22501 cacgaaccgg gaactcgccg ttctctgcgt gaatggttac acgacagtca gatggatctg
    22561 cacgacattc atatcggcta ctcttccggc acctttagcc tgcaagaacg tgcatgggca
    22621 gaacaactct atctgagcat gtgccatgaa gtgcagaagc aactggatcc gcaaaaccgt
    22681 gcgcatcgtc cgataatcga cgaactgcag gaacgtatgg cggacaaaat gtacgtcaat
    22741 ttctcgctgt tccagtcaat gccggacgca tgggggatcg accagttgtt cccggttctg
    22801 ccgctggaag ggctggatca agtgccggaa cgtcgcgctg tgctgctgga tattacctgt
    22861 gactctgacg gtgctatcga ccactatatt gatggtgatg gtattgccac gacaatgcca
    22921 atgccggagt acgatccaga gaatccgccg atgctcggtt tctttatggt cggcgcatat
    22981 caggagatcc tcggcaacat gcacaacctg ttcggtgata ccgaagcggt tgacgtgttc
    23041 gtcttccctg acggtagtgt agaagtggaa ctgtctgacg aaggcgatac cgttgcggat
    23101 atgctgcaat atgtgcagct cgatccgaaa acgctgttaa ctcagttccg cgatcaagtg
    23161 aagaaaaccg atcttgatgc tgaactgcaa caacagttcc ttgaagagtt cgaggcaggt
    23221 ttgtacggtt atacttatct ggaagatgag taagtccgta ttacttgaat ccgcttaatt
    23281 tagcggtgat aatccgccac aatttattgt gacaaatcca acccttcctc gtcgggccta
    23341 acgacgcgga agggtttttt tatatcgact ttgtaatagg agtccatcca tgagcacctt
    23401 aggtaatcaa tacgataact cactggtttc caacgccttt ggttttttac gcctgccgat
    23461 gaacttccag ccgtatgaca gcgatgctga ctgggtgatt actggtgtgc cgttcgatat
    23521 ggccacttct ggtcgtgcgg ggggacgcca cggtccggca gcgatccgtc aggtttcgac
    23581 gaatcttgcc tgggaacaca atcgcttccc gtggaatttc gacatgcgtg agcgcctgaa
    23641 cgtcgtggac tgcggcgatc tggtatatgc ctttggcgat gcccgtgaga tgagcgaaaa
    23701 actgcaggca cacgccgaga agctgctggc tgccggtaag cgtatgctct ctttcggtgg
    23761 tgaccacttt gttacgctgc cgctgctgcg tgctcatgcg aagcatttcg gcaaaatggc
    23821 gctggtacac tttgacgccc acaccgatac ctacgcgaac ggttgtgaat ttgaccacgg
    23881 caccatgttc tataccgcgc cgaaagaagg tctgatcgac ccgaatcatt ccgtgcagat
    23941 tggtattcgt accgagtttg ataaagacaa cggttttacc gtgctggacg cctgccaggt
    24001 gaacgatcgc agcgtggatg acgttatcgc ccaagtgaaa cagattgtgg gtgatatgcc
    24061 ggtttacctg acctttgata tcgactgcct ggatcctgct ttcgcgccgg gaaccggtac
    24121 gccagtgatt ggcggcctga cctccgatcg cgccattaaa ctggtacgcg gcctgaaaga
    24181 tctcaacatt gttgggatgg acgtagtgga agtggctccg gcatacgatc agtcggaaat
    24241 caccgctctg gctgcggcga cgctggcgct ggagatgctg tatattcagg cggcgaaaaa
    24301 gggcgagtaa gcaccagatg cgatgcgcac gggtaaaacg tgccattaat gtcggatgcg
    24361 gcgtgaacgc cttatccgac ctacgttcgg cacccgtagg ccggataaga tgcgccagca
    24421 tcgcatccgg caatgcgcac aaggtaacaa atgtgccatt aatgtcagat gcggcgtgaa
    24481 cgccttatct gacctacgtt cgacaccacc aggctttact taatcccatc cgcgctcatg
    24541 cgatcgcgaa tatgctgggc gcgttcggcg gatgccggat ggtcgtcaaa cattgagctt
    24601 tggcggcctt cttccagttt cgccagtttt tcaaagctgg tggcaagacc tgccgggctg
    24661 atgccgcgtt ggcgcagaag atcgtaagaa taatcatcgg cttctgcttc ctggcgctgg
    24721 gagaattgcg aattgactaa tttctcgccc agatcaccaa gttgtgattg agataaactg
    24781 ccgacaatcc cgcccgcaga ggccgcagct actcgcacgg catttgtacc aagcgccacc
    24841 tgcatccctt tcttcacatg gcctaacgcc acgtgcccca tctcgtgacc gatcaccgct
    24901 tcgacttcgt tatccgtcat catatccatc agcccgctat agacgcggat acagccgtta
    24961 gccattgcaa aggcgttcac atccttcgcc atatacactt tgtaattcac cggctgaccg
    25021 ttgatattgt tgcctagcgc attggcaata gttgtcagac gtttagcgta ttcgctattg
    25081 gctggcgcaa tcgtcgcctt gctgtccatc tcctgacatg cctgatcgct cagggttttc
    25141 acctgcgcat cactcaaact gtaagcctga aaagcttccg ctcctgatga gagcagtccg
    25201 ttggagtcca tattctggca accagtcagt accgttgcca cgctcattgc taccaataag
    25261 gcgcgaattt tcatgttttc tcttccgcac aaggtcagga ttattctaaa aatgcgccgt
    25321 ttgcaggtga atcgacgctc agtctcagta taaggaaaag cgcagcggac gggcgagtag
    25381 attgcgcaac atgcgagcat gatccagaga tttctgaagc ggcaaaagga tgttccatgt
    25441 acatgacgcg cggcttgcgg taaattgttg gcaaattttc cggcgtagcc caaaacgcgc
    25501 tgtcgtcaag tcgttaaggg cgtgcccttc atcatccgat ctggagtcaa aatgtcctca
    25561 cgtaaagagc ttgccaatgc tattcgtgcg ctgagcatgg acgcagtaca gaaagccaaa
    25621 tccggtcacc cgggtgcccc tatgggtatg gctgacattg ccgaagtcct gtggcgtgat
    25681 ttcctgaaac acaacccgca gaatccgtcc tgggctgacc gtgaccgctt cgtgctgtcc
    25741 aacggccacg gctccatgct gatctacagc ctgctgcacc tcaccggtta cgatctgccg
    25801 atggaagaac tgaaaaactt ccgtcagctg cactctaaaa ctccgggcca cccggaagtg
    25861 ggttacaccg ctggtgtgga aaccaccacc ggtccgctgg gtcagggtat tgccaacgca
    25921 gtcggtatgg cgattgcaga aaaaacgctg gcggcgcagt ttaaccgtcc gggccacgac
    25981 attgtcgacc actacaccta cgccttcatg ggcgacggct gcatgatgga aggcatctcc
    26041 cacgaagttt gctctctggc gggtacgctg aagctgggta aactgattgc gttctacgat
    26101 gacaacggta tctctattga tggtcacgtt gaaggctggt tcaccgacga caccgcaatg
    26161 cgtttcgaag cttacggctg gcacgttatt cgcgacatcg acggtcatga cgcggcatcc
    26221 atcaaacgcg cagtagaaga agcgcgcgca gtgactgaca aaccgtccct gctgatgtgc
    26281 aaaaccatca tcggtttcgg ttccccgaac aaagccggta ctcacgactc ccacggtgcg
    26341 ccgctgggcg acgctgaaat tgccctgacc cgcgaacagc tgggctggaa atatgcaccg
    26401 ttcgaaatcc cgtctgaaat ctatgctcag tgggatgcga aagaagcagg ccaggcgaaa
    26461 gaatccgcat ggaacgagaa attcgctgct tacgcgaaag cttatccgca ggaagccgct
    26521 gaatttaccc gccgtatgaa aggcgaaatg ccgtctgact tcgacgcgaa agcaaaagag
    26581 ttcattgcta aactgcaggc taacccggcg aaaatcgcca gccgtaaagc gtctcagaat
    26641 gctatcgaaa ctttcggtcc gctgttgccg gaattcctcg gcggttctgc tgacctggca
    26701 ccgtctaacc tgaccctgtg gtctggttct aaagcaatca acgaagatgc tgcgggtaac
    26761 tacatccact acggtgttcg cgagttcggt atgaccgcga ttgctaacgg tatctccctg
    26821 cacggtggtt tcctgccgta cacctccacc ttcctgatgt tcgtggaata cgcacgtaac
    26881 gccgtacgta tggctgcgct gatgaaacag cgtcaggtga tggtttacac ccacgactcc
    26941 atcggtctgg gcgaagatgg cccgactcac cagccggtag agcaggtcgc ttctctgcgc
    27001 gtaaccccga acatgtctac atggcgtccg tgtgaccagg ttgaatccgc ggtcgcgtgg
    27061 aaatacggtg ttgagcgtca ggacggcccg accgcactga tcctctcccg tcagaacctg
    27121 gcgcagcagg aacgaactga agagcaactg gcaaacatcg cgcgcggtgg ttatgtgctg
    27181 aaagactgcg ccggtcagcc ggaactgatt ttcatcgcta ccggttcaga agttgaactg
    27241 gctgttgctg cctacgaaaa actgactgcc gaaggcgtga aagcgcgcgt ggtgtccatg
    27301 ccgtctaccg acgcatttga caagcaggat gctgcttacc gtgaatccgt actgccgaaa
    27361 gcggttactg cacgcgttgc ggtagaagcg ggtattgctg actactggta caagtatgtt
    27421 ggcctgaatg gcgctatcat cggtatgacc accttcggtg agtcagctcc ggcagagttg
    27481 ctgttcaaag agttcggctt caccgtcgac aacgtcgttg cgaaagcaaa agaactgctg
    27541 taattagcat ttcgggtaaa aaggtcgctt cggcgacctt ttttattacc ttgatatgtc
    27601 cgtttgcgga caagcaatag ataaagcgtg ttgcagatca caaatatcta tatgcaataa
    27661 atatcaatta tgtaatatgc atcacgatat gcgtattgac atttgttgtt atatctataa
    27721 ctcaatgtta tataagaaat taataattca ctgttttcaa aacaccggtt tccctgctca
    27781 attgctttca ttaaaccgca cgagtatttt atttttaccg ccggacggta ccctaaaaat
    27841 aaaataagga taatttatgc ggcttagtga ctattttcca gaatcatcaa tctcagttat
    27901 acattcagca aaagattggc aggaagctat cgatttctcg atggtatcat tgctggataa
    27961 aaactatatc agcgagaatt acattcaggc aattaaagat tccaccatta acaatggccc
    28021 ttattatatt ctcgcaccag gcgtggcaat gcctcatgcg cgaccggaat gtggggcgct
    28081 taaaaccggg atgtctttga cattacttga acaaggtgtt tattttccgg ggaatgacga
    28141 accaattaaa ttactcatcg gactctctgc tgccgatgcc gattcgcaca ttggcgctat
    28201 tcaggcgtta agtgaattac tgtgcgaaga agaaatactc gaacaactct taacagcatc
    28261 accagaaaaa caattagcgg acattatcag ccgcggataa ttactctctc ctctacagga
    28321 taatattatg gaaaacaagt ctgctcgtgc aaaggtccag gcttttgggg gctttttgac
    28381 tgcaatggtc atccccaata ttggtgcttt tattgcctgg ggttttatta ctgcgttatt
    28441 tattcccacc ggttggctgc ctaacgaaca tttcgccaaa attgtcggcc cgatgattac
    28501 ctatttattg cccgtgatga ttggttctac aggtggtcat ctggtcggcg gtaaacgcgg
    28561 ggcggtcatg ggcggaatag gtactattgg tgtgatcgtt ggcgcagaga tcccgatgtt
    28621 ccttggctca atgatcatgg ggccgctcgg tgggttggtc ataaaatatg tcgataaggc
    28681 actggaaaaa cgcatacctg ccggttttga gatggttatc aataacttct cattaggtat
    28741 cgcggggatg ctcctttgtc tgctgggttt tgaagtgatc ggcccggcgg tgttaattgc
    28801 caatactttc gtcaaagagt gtatcgaggc gctggtacat gcgggttatc tgcctctgct
    28861 gtcagtcatc aatgaaccgg cgaaagtgct tttccttaat aatgcgatcg atcagggcgt
    28921 ctattatccg ctgggaatgc aacaggcttc ggttaacggt aaatccatct tctttatggt
    28981 ggcctctaac ccaggtccgg gcctggggct gctgctggcg tttaccttgt ttggtaaagg
    29041 gatgagtaaa cgttctgcgc ccggggcgat gattattcac ttcctcggtg ggatccacga
    29101 actgtatttc ccatatgtgc tgatgaagcc gctgactatt attgccatga ttgcgggcgg
    29161 tatgtctggt acctggatgt ttaacttact ggacggtggt ctggtggctg gcccaagtcc
    29221 ggggtctatc tttgcttacc tggcactgac gccgaaaggc tcgttcctgg cgacaattgc
    29281 cggtgttacg gtaggtaccc tggtgtcctt tgctattact tcgctgatac tgaagatgga
    29341 aaaaacggtg gaaacggaga gcgaagatga gtttgctcag tcagccaatg cggttaaggc
    29401 gatgaaacaa gagggtgcat tctcgttaag cagggttaag cgtatcgcct ttgtttgcga
    29461 tgcggggatg ggctccagtg cgatgggcgc gaccaccttc cgtaaacgcc tggaaaaagc
    29521 ggggctggca atagaagtaa aacattacgc gatagaaaac gtgcctgcgg atgccgatat
    29581 cgtcgtcact cacgccagtc tggaagggcg cgtgaaacgt gtgacggata aaccgctgat
    29641 attgattaat aactatattg gcgatccaaa actcgacact ttatttaatc aattaaccgc
    29701 cgaacataaa cactgattac agaggtaaaa atgaaaacca aagttgctgc tatttatggc
    29761 aagcgggatg tccgtctgcg cgaatttgaa ctgccagaaa ttaccgataa tgaactgtta
    29821 gtgagtgtaa tttctgacag cgtctgttta tcgacctgga aagcggcgtt actcggtagt
    29881 gaacataaac gcgtacccga cgatttagaa aatcatccgg tcattaccgg gcatgaatgt
    29941 gccggggtta ttgtcgaagt gggtaaaaat ctcactggca aatataaaaa aggccagcgt
    30001 tttgtattgc aaccggcgat ggggttacca agcggatatt cagcaggcta cagctacgaa
    30061 tattttggcg gtaacgcca
//
LOCUS       DADMHC010000027        29969 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.027, whole genome shotgun sequence.
ACCESSION   DADMHC010000027 DADMHC010000000
VERSION     DADMHC010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29969)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29969)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29969
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.027"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..877)
                     /locus_tag="JNZ57_001002"
     CDS             complement(<1..877)
                     /locus_tag="JNZ57_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalose-phosphate synthase"
                     /protein_id="HAY8827306.1"
                     /translation="MSRLVVVSNRIAPPDEHAASAGGLAVGILGALKAAGGLWFGWSG
                     ETGNEDQPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLMQFQRPA
                     WDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPT
                     PEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKA
                     FRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLA
                     YEALLEKYPQHHGKIR"
     gene            complement(852..1649)
                     /gene="otsB"
                     /locus_tag="JNZ57_001003"
     CDS             complement(852..1649)
                     /gene="otsB"
                     /locus_tag="JNZ57_001003"
                     /EC_number="3.1.3.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HAY8827307.1"
                     /translation="MTEPLTETPELSAKYAWFFDLDGTLEIKPHPDQVVVPDNILQGL
                     QLLATASDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIA
                     RDISVQLHTVIAQYPGAELEAKGMAFALHYRQAPQHEDALMTLAQRITQIWPQMALQQ
                     GKCVVEIKPRGTSKGEAIAAFMQEAPFIGRTPVFLGDDLTDESGFAVVNRLGGMSVKI
                     GTGATQASWRLAGVPDVWSRLEMITTALQQKRENNRSDDYESFSRSI"
     gene            complement(1816..2805)
                     /locus_tag="JNZ57_001004"
     CDS             complement(1816..2805)
                     /locus_tag="JNZ57_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose ABC transporter permease AraH"
                     /protein_id="HAY8827308.1"
                     /translation="MMSSVSTSGSGAPKSSFSFGRIWDQYGMLVVFAVLFIACAIFVP
                     NFATFINMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTES
                     LWIGVAAGLLLGILCGLVNGFVIAKLKINALITTLATMQIVRGLAYIISDGKAVGIED
                     ESFFALGYANWFGLPAPIWLTVACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPV
                     VRTKIIIFVLSGLVSAIAGIILASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGK
                     ISYVVAGILILGTVENAMNLLNISPFAQYVVRGLILLAAVIFDRYKQKAKRTV"
     gene            complement(2817..4331)
                     /locus_tag="JNZ57_001005"
     CDS             complement(2817..4331)
                     /locus_tag="JNZ57_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose ABC transporter ATP-binding protein
                     AraG"
                     /protein_id="HAY8827309.1"
                     /translation="MQQSTPYLSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGA
                     GKSTLLKILSGNYAPTTGSVVINGQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAEN
                     IYLGQLPHKGGIVNRSLLNYEAGLQLKHLGMDIDPDTPLKYLSIGQWQMVEIAKALAR
                     NAKIIAFDEPTSSLSAREIDNLFRVIRELRKEGRVILYVSHRMEEIFALSDAITVFKD
                     GRYVKTFTDMQQVDHDALVQAMVGRDIGDIYGWQPRSYGEERLRLDAVKALGVRTPIS
                     LAVRSGEIVGLFGLVGAGRSELMKGLFGGTQITAGQVYIDQQPIDIRKPSHAIAAGMM
                     LCPEDRKAEGIIPVHSVRDNINISARRKHVLGGCVINNGWEENNADQHIRSLNIKTPG
                     AEQLIMNLSGGNQQKAILGRWLSEEMKVILLDEPTRGIDVGAKHEIYNVIYALAAQGV
                     AVLFASSDLPEVLGVADRIVVMREGEIAGELLHEQADERQALSLAMPKVSQAVA"
     gene            complement(4401..5390)
                     /locus_tag="JNZ57_001006"
     CDS             complement(4401..5390)
                     /locus_tag="JNZ57_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001397210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8827310.1"
                     /translation="MHKFTKALAAIGLAAVMSQSAMAENLKLGFLVKQPEEPWFQTEW
                     KFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKAR
                     GYDMKVIAVDDQFVNAKGKPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVKESAV
                     MVITANELDTARRRTTGSMDALKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPE
                     VKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGINGVDAVSELSKVQATGFYGSLL
                     PSPDVHGYKSSEMLYNWVAKDVEPPKFTEVTDVVLITRDNFKEELEKKGLGGK"
     gene            6104..6607
                     /locus_tag="JNZ57_001007"
     CDS             6104..6607
                     /locus_tag="JNZ57_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin-like protein"
                     /protein_id="HAY8827311.1"
                     /translation="MATAGMLLKLNSQMNREFYASNLYLHLSNWCSEQSLNGTATFLR
                     AQAQSNVTQMMRMFNFMKSVGATPIVKAIDVPGEKLNSLEELFQKTMEEYEQRSSTLA
                     QLADEAKELNDDSTVNFLRDLEKEQQHDGLLLQTILDEVRSAKLAGMCPVQTDQHVLN
                     VVSHQLH"
     gene            complement(6686..6937)
                     /locus_tag="JNZ57_001008"
     CDS             complement(6686..6937)
                     /locus_tag="JNZ57_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2766 domain-containing protein"
                     /protein_id="HAY8827312.1"
                     /translation="MSQPLNADQELVSDVVACQLVIKQILDVLDVIAPVEVREKMSSQ
                     LKNIDFSNHPAAADPVTMRAIQKAIALIELKFTPQGESH"
     gene            complement(7052..7138)
                     /gene="azuC"
                     /locus_tag="JNZ57_001009"
     CDS             complement(7052..7138)
                     /gene="azuC"
                     /locus_tag="JNZ57_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein AzuC"
                     /protein_id="HAY8827313.1"
                     /translation="MKLRKILKSMFNNYCKTFKDVPPGNMFR"
     gene            7401..7724
                     /locus_tag="JNZ57_001010"
     CDS             7401..7724
                     /locus_tag="JNZ57_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827314.1"
                     /translation="MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQ
                     HAHTDRYVSRGIADRACQQEGYTHAIPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSA
                     FPVFL"
     gene            7895..8392
                     /gene="ftnA"
                     /locus_tag="JNZ57_001011"
     CDS             7895..8392
                     /gene="ftnA"
                     /locus_tag="JNZ57_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin"
                     /protein_id="HAY8827315.1"
                     /translation="MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLR
                     RHAQEEMTHMQHLFDYLTDTGNLPRINTVESPFAEYSSLDELFQETYKHEQLITQKIN
                     ELAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKELST
                     LDTQN"
     gene            complement(8430..8669)
                     /locus_tag="JNZ57_001012"
     CDS             complement(8430..8669)
                     /locus_tag="JNZ57_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecH family protein"
                     /protein_id="HAY8827316.1"
                     /translation="MDSIHGHEVLNMMIESGEQYTHASLEAAIKARFGEQARFHTCSA
                     EGMTAGELVAFLAAKGKFIPSKDGFSTDQSKICRH"
     gene            8860..10071
                     /gene="tyrP"
                     /locus_tag="JNZ57_001013"
     CDS             8860..10071
                     /gene="tyrP"
                     /locus_tag="JNZ57_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine transporter TyrP"
                     /protein_id="HAY8827317.1"
                     /translation="MKNRTLGSVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLW
                     ALMCYTALLLLEVYQHVPADTGLGTLAKRYLGRYGQWLTGFSMMFLMYALTAAYISGA
                     GELLASSISDWTGISMSATAGVLLFTFVAGGVVCVGTSLVDLFNRFLFSAKIIFLVVM
                     LVLLLPHIHKVNLLTLPLQQGLALSAIPVIFTSFGFHGSVPSIVSYMDGNVRKLRRVF
                     ITGSAIPLVAYIFWQVATLGSIDSTTFMGLLANHAGLNGLLQALREMVASPHVELAVH
                     LFADLALATSFLGVALGLFDYLADLFQRSNTVGGRLQTGAITFLPPLAFALFYPRGFV
                     MALGYAGVALAVLALIIPSLLTWQSRKHNPQAGYRVKGGRPALVVVFLCGIAVIGVQF
                     LIAAGLLPEVG"
     gene            complement(10133..10798)
                     /gene="yecA"
                     /locus_tag="JNZ57_001014"
     CDS             complement(10133..10798)
                     /gene="yecA"
                     /locus_tag="JNZ57_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein YecA"
                     /protein_id="HAY8827318.1"
                     /translation="MKTGPLNESELEWLDDILTKYNTNHAILDVAELDDLLTAVLSSP
                     QEIEPEQWLVAVWGGADYVPRWASEKEMTRFMNLAFQHMADTAARLNEFPEQFEPLFG
                     LREVDGSELTIVEEWCFGYMRGVALSDWSTLPDSLKPALEAIALHGTEENFERVEKMS
                     PEAFEERVDAIRLAALDLHAYWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKFKQC
                     CLH"
     gene            complement(10994..11080)
                     /locus_tag="JNZ57_001015"
     tRNA            complement(10994..11080)
                     /locus_tag="JNZ57_001015"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11044..11046),aa:Leu,seq:taa)
     gene            complement(11093..11166)
                     /locus_tag="JNZ57_001016"
     tRNA            complement(11093..11166)
                     /locus_tag="JNZ57_001016"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11132..11134),aa:Cys,seq:gca)
     gene            complement(11221..11296)
                     /locus_tag="JNZ57_001017"
     tRNA            complement(11221..11296)
                     /locus_tag="JNZ57_001017"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11261..11263),aa:Gly,seq:gcc)
     gene            complement(11448..11996)
                     /gene="pgsA"
                     /locus_tag="JNZ57_001018"
     CDS             complement(11448..11996)
                     /gene="pgsA"
                     /locus_tag="JNZ57_001018"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HAY8827319.1"
                     /translation="MQFNIPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAV
                     TDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEHYHSWWVTLPAATMIARE
                     IIISALREWMAELGKRSSVAVSWIGKVKTTAQMVALAWLLWRPNIWVEYAGIALFFVA
                     AVLTLWSMLQYLSAARADLLDQ"
     gene            complement(12053..13885)
                     /gene="uvrC"
                     /locus_tag="JNZ57_001019"
     CDS             complement(12053..13885)
                     /gene="uvrC"
                     /locus_tag="JNZ57_001019"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310678.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HAY8827320.1"
                     /translation="MSDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLS
                     SYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSY
                     PFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYR
                     NRSRPCLQYQIGRCLGPCVEGLVSEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETAS
                     QNLEFEEAARIRDQIQAVRRVTEKQFVSNTGNDLDVIGVAFDAGMACVHVLFIRQGKV
                     LGSRSYFPKVPGGTELSEVVETFVGQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLS
                     ELAGRKINVQTKPRGDRARYLKLARTNAATALISKLSQQSTVHQRLTALASVLKLPEV
                     KRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNITGITPGDDYAAMNQVLRRRY
                     GKAIDDSKIPDVILIDGGKGQLAQAKNVFAELDVSWDKNHPLLLGVAKGADRKAGLET
                     LFFEPEGEGFSLPPDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSSLETIEGVGP
                     KRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH"
     gene            complement(13882..14538)
                     /gene="uvrY"
                     /locus_tag="JNZ57_001020"
     CDS             complement(13882..14538)
                     /gene="uvrY"
                     /locus_tag="JNZ57_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrY/SirA/GacA family response regulator
                     transcription factor"
                     /protein_id="HAY8827321.1"
                     /translation="MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCR
                     TNAVDVVLMDMSMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYL
                     SKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLM
                     ITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ
                     "
     gene            14833..15009
                     /locus_tag="JNZ57_001021"
     CDS             14833..15009
                     /locus_tag="JNZ57_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827322.1"
                     /translation="MIKIFIGHYINVFYSTADITLKKQPLLFLAKLMVYSAALTFFTA
                     NFHCNMTRKINEYA"
     gene            14996..15220
                     /locus_tag="JNZ57_001022"
     CDS             14996..15220
                     /locus_tag="JNZ57_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2594 family protein"
                     /protein_id="HAY8827323.1"
                     /translation="MSTPDFSTAENNQELANEVSCLKAMLTLMLQAMGQADAGRVMLK
                     MEKQLALIEDETQAAVFSKTVKQIKQAYRQ"
     gene            complement(15287..16009)
                     /gene="sdiA"
                     /locus_tag="JNZ57_001023"
     CDS             complement(15287..16009)
                     /gene="sdiA"
                     /locus_tag="JNZ57_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator SdiA"
                     /protein_id="HAY8827324.1"
                     /translation="MQDTDFFSWRRTMLLRFQRMEAAEEVYHEIELQAQQLEYDYYSL
                     CVRHPVPFTRPKVAFYTNYPESWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE
                     AQPLWEAAHAHGLRRGVTQYLMLPNRALGFLSFSRCSTREIPILSDELQLKMQLLVRE
                     SLMALMRLNDEIVMTPEMNFSKREKEILKWTAEGKTSAEIAMILSISENTVNFHQKNM
                     QKKINAPNKTQVACYAAATGLI"
     gene            complement(16239..16991)
                     /gene="yecC"
                     /locus_tag="JNZ57_001024"
     CDS             complement(16239..16991)
                     /gene="yecC"
                     /locus_tag="JNZ57_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine ABC transporter ATP-binding protein
                     YecC"
                     /protein_id="HAY8827325.1"
                     /translation="MSAIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTT
                     LLRSINLLEQPEAGTITVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTV
                     LENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALA
                     MRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMD
                     LGRIVEQGAAKALFADPQQPRTRQFLEKFLLQ"
     gene            complement(16988..17656)
                     /gene="tcyL"
                     /locus_tag="JNZ57_001025"
     CDS             complement(16988..17656)
                     /gene="tcyL"
                     /locus_tag="JNZ57_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine ABC transporter permease"
                     /protein_id="HAY8827326.1"
                     /translation="MQESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALMR
                     LSPIWPVRWLARFYISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAY
                     AAETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVVLPPLSNSFISLVKDT
                     SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQE
                     REPK"
     gene            complement(17671..18657)
                     /gene="dcyD"
                     /locus_tag="JNZ57_001026"
     CDS             complement(17671..18657)
                     /gene="dcyD"
                     /locus_tag="JNZ57_001026"
                     /EC_number="4.4.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-cysteine desulfhydrase"
                     /protein_id="HAY8827327.1"
                     /translation="MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTP
                     MAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENP
                     IGTTAENYLTNGNRLLLNLFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGG
                     SNALGALGYVESALEIAQQCEGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGV
                     TVSRSVADQLPKVVNLQQAIAKELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLA
                     RLEGILLDPVYTGKAMAGLIDGISQKRFKDEGPILFIHTGGAPALFAYHPHV"
     gene            complement(18762..19562)
                     /gene="tcyJ"
                     /locus_tag="JNZ57_001027"
     CDS             complement(18762..19562)
                     /gene="tcyJ"
                     /locus_tag="JNZ57_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8827328.1"
                     /translation="MKLAHLGRQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLL
                     VGLEGTYPPFSFQGDDGKLTGFEVEFAQQLAKHLGVEASLKPTKWDGMLASLDSKRID
                     VVINQVTISDERKKKYDFSTPYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNY
                     EEWLRQNVQGVDVRTYDDDPTKYQDLRVGRIDAILVDRLAALDLVKKTNDTLAVTGEA
                     FSRQESGVALRKGNEDLLKAVNDAIAEMQKDGTLQALSEKWFGADVTK"
     gene            complement(19650..20201)
                     /gene="fliZ"
                     /locus_tag="JNZ57_001028"
     CDS             complement(19650..20201)
                     /gene="fliZ"
                     /locus_tag="JNZ57_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310687.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulatory protein FliZ"
                     /protein_id="HAY8827329.1"
                     /translation="MMVQHLKRRPLSRYLKDFKHSQAHCAHCRKLLDRITLVRDGKIV
                     NKIEISRLDTLLDENGWQVEQQSWAALCRFCGDLHCKTQSDFFDIIGFKQFLFEQTEM
                     SPGTVREYVVRLRRLGNHLHEQNISLDQLQDGFLDEILAPWLPTTSTNNYRIALRKYQ
                     HYQRQTCTGLVQKSSSLPASDIY"
     gene            complement(20247..20966)
                     /locus_tag="JNZ57_001029"
                     /pseudo
     CDS             complement(20247..20966)
                     /locus_tag="JNZ57_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310688.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FliA"
     gene            complement(21286..22992)
                     /locus_tag="JNZ57_001030"
     CDS             complement(21286..22992)
                     /locus_tag="JNZ57_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin FliC"
                     /protein_id="HAY8827330.1"
                     /translation="MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDD
                     AAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTG
                     TNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNALAKDGSMKIQVGANDGQTITIDL
                     KKIDSDTLGLNGFNVNGKGTIANKAATVSDLTAAGATGTGPYAVTTNNTVLSASDALS
                     RLKTGDTVTTTGSSAAIYTYDAAKGNFTTQATVADGDVVNFANTLKPAAGTTASGVYT
                     RSTGDVKFDVDANGDVTIGGKAAYLDATGNLSTNNAGIASSAKLSDLFASGSTLATTG
                     SIQLSGTTYNFGAAATSGVTYTKTVSADTVLSTVQSAATANTAVTGATIKYNTGIQSA
                     TASFGGANTNGAGNSNDTYTDADKELTTTASYTINYNVDKDTGTVTVASNGAGATGKF
                     AATVGAQAYVNSTGKLTTETTSAGTATKDPLAALDEAISSIDKFRSSLGAIQNRLDSA
                     VTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLL
                     QG"
     gene            23258..24664
                     /gene="fliD"
                     /locus_tag="JNZ57_001031"
     CDS             23258..24664
                     /gene="fliD"
                     /locus_tag="JNZ57_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HAY8827331.1"
                     /translation="MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKL
                     SAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHL
                     AQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA
                     KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEV
                     SVAAQNAQLTVNNVAIENSSNTISDALENITLNLHDVTTGNQTLTITQDTSKAQTAIK
                     DWVNAYNSLIDTFSSLTKYTAVDAEADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS
                     SSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGS
                     NLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKKQFTQLDVLMTSL
                     NSTSSYLTQQFENNSNSK"
     gene            24689..25099
                     /gene="fliS"
                     /locus_tag="JNZ57_001032"
     CDS             24689..25099
                     /gene="fliS"
                     /locus_tag="JNZ57_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HAY8827332.1"
                     /translation="MYAAKGTQAYAQIGVESAVMSASQQQLVTMLFDGVLSALVRARL
                     FMQDNNQQGKGVSLSKAINIIENGLRVSLDEESKDELTQNLIALYSYMVRRLLQANLR
                     NDVSAVEEVEALMRNIADAWKESLLSPSLIQDPV"
     gene            25099..25465
                     /gene="fliT"
                     /locus_tag="JNZ57_001033"
                     /pseudo
     CDS             25099..25465
                     /gene="fliT"
                     /locus_tag="JNZ57_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001015018.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulatory protein FliT"
     gene            25543..27030
                     /gene="amyA"
                     /locus_tag="JNZ57_001034"
     CDS             25543..27030
                     /gene="amyA"
                     /locus_tag="JNZ57_001034"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HAY8827333.1"
                     /translation="MRNPTLLQCFHWYYPEGGKLWPELAERADGFNDIGINMVWLPPA
                     YKGASGGYSVGYDSYDLFDLGEFDQKGSIPTKYGDKVQLLAAIDALKRNDIAVLLDVV
                     VNHKMGADEKEAIRVQRVNADDRTQIDEEIIECEGWTRYTFPARAGQYSQFIWDFKCF
                     SGIDHIENPDEDGIFKIVNDYTGEGWNDQVDDELGNFDYLMGENIDFRNHAVTEEIKY
                     WARWVMGQTQCDGFRLDAVKHIPAWFYKEWIEHVQEVAPKPLFIVAEYWSHEVDKLQT
                     YIDQVEGKTMLFDAPLQMKFHEASRMGRDYDMTQIFTGTLVEADPFHAVTLVANHDTQ
                     PLQALEAPVEPWFKPLAYALILLRENGVPSVFYPDLYGAHYEDVGGDGQTYPIDMPII
                     EQLDELILARQRFAHGVQTLFFDHPNCIAFSRSGTDEYPGCVVVMSNGDDGEKTIHLG
                     ENYGNKTWRDFLGNRQESVITDEHGEATFFCNGGSVSVWVIEEVI"
     gene            complement(27064..27477)
                     /locus_tag="JNZ57_001035"
     CDS             complement(27064..27477)
                     /locus_tag="JNZ57_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310694.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY8827334.1"
                     /translation="MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQ
                     RALVSPEAIGSLIVTKEGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERD
                     GNTIEYDGMTMERVDRPTAECAAALDKAPLPTPLP"
     gene            27664..28869
                     /gene="yedE"
                     /locus_tag="JNZ57_001036"
     CDS             27664..28869
                     /gene="yedE"
                     /locus_tag="JNZ57_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
                     /protein_id="HAY8827335.1"
                     /translation="MSWQQFKHAWLIKFWAPIPAVIAAGILSTYYFGITGTFWAVTGE
                     FTRWGGQLLQLFGVHAEEWGYFKIIHLEGSPLTRIDGMMILGMFGGCFAAALWANNVK
                     LRMPRSRIRIMQAIIGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAIATAIGSW
                     FGARFTLLPIFRIPVKMQKVSAASPLTQKPDQARRRFRLGMLVFFGMLGWALLTAMNQ
                     PKLGLAMLFGVGFGLLIERAQICFTSAFRDMWITGRTHMAKAIIIGMAVSAIGIFSYV
                     QLGVEPKIMWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQVHYWWVGLGNVIGS
                     TILAYYWDDFAPGLATDWDKINLLKTFGPMGGLLVTYLLLFTALMLIIGWEKRFFRRA
                     APQTAKEIA"
     gene            28866..29099
                     /gene="yedF"
                     /locus_tag="JNZ57_001037"
     CDS             28866..29099
                     /gene="yedF"
                     /locus_tag="JNZ57_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HAY8827336.1"
                     /translation="MKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCP
                     QSINNIPLDARNHGYTVRDIQQDGPTIRYLIQK"
     gene            29206..29877
                     /locus_tag="JNZ57_001038"
     CDS             29206..29877
                     /locus_tag="JNZ57_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016245363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase"
                     /protein_id="HAY8827337.1"
                     /translation="MCGRFAQSQTREDYLALLAEDIERDIPYDPEPIGRYNVAPGTKV
                     LLLSERDEHLHLDPVFWGYAPGWWDKPPLINARVETAATSRMFKPLWQHGRAICFADG
                     WFEWKKEGDKKQPFFIYRADGQPIFMAAIGSTPFEHGDEAEGFLIVTAAADQGLVDIH
                     DRRPLVLSPEAAQEWMRQEIGGKEASEIATNGCVPANQFTWHPVSRAVGNVKNQGAEL
                     IQPVC"
BASE COUNT         7443 a         7699 c         7182 g         7645 t
ORIGIN      
        1 aacgaatttt accatgatgc tgcggatatt tttccagcaa cgcttcatag gcgagaaaac
       61 gctctggcaa acctttggaa taatccagcc gttcgacaga aaagatattt tgtacgtttt
      121 tcagttccgc tttaagttgc gccagttttg gcggcagtgg cccggcagcc tgtttggcta
      181 tttctttcgg ttcaatgccg atcgggtaga cttctgttcg aaatgctttg ccccaggctg
      241 tatggctttt tgcgctacgt gtcgtgacgc gggtcaggtt agaaagacaa tccaggaacg
      301 ccagacgatc gttttctgtc tggaaaccca gcaaatcata atcacaaagc tgttcaagca
      361 aggtgtcata tgtcggcagc gcgttgaaga tttccggtgt cgggaaagga atatgcagaa
      421 agaaaccaat gcgattattc accccacgtt tgcgtaattc atgcgcaaag ggcaacaggt
      481 gataatcgtg gatccagata atgtcatcgt cttgcaacag cggcagtaat ttatctgcca
      541 gcaacgcatt tacgcgtaga tagccgtccc aggcaggacg ctgaaattgc atcagatcga
      601 gccgataatg aaaagcgggc cagagaacgg cattggagaa ttggttgtag tattcgtcaa
      661 ggtcctgttc gctgaggtta aaagaggccc acgtaatgtt accttttttc acctttttta
      721 gcggctgatc ctcattccct gtttcaccac tccagccaaa ccacagtccg cctgcggctt
      781 tcagtgcccc cagtatgcca acggcaaggc caccggcact ggcggcgtgc tcgtctggtg
      841 gtgcaatccg gttagatact acgactaaac gactcatagt catcactcct gttattttct
      901 cttttttgtt gtaatgcggt ggttatcatt tcaagcctgc tccagacatc cggcacaccc
      961 gccagtcgcc atgatgcctg agttgcacct gtgccaattt ttactgacat tccgcccagt
     1021 cggttaacga ctgcgaagcc agattcatcg gttaaatcat cgcccagaaa tacgggcgtt
     1081 cgcccgataa agggagcttc ctgcataaaa gctgcaattg cctcaccttt actggtacct
     1141 ctcggtttga tctcgacaac acactttccc tgctgtaacg ccatttgtgg ccagatctga
     1201 gtaatacgtt gcgctaatgt cattaatgcg tcttcatgct gcggagcctg acgataatgc
     1261 agcgcaaaag ccatcccttt cgcctccagc tccgcgccgg gatactgagc gataactgta
     1321 tgcagttgca cgctaatatc acgcgcaatc gcatccggca gatgaacgat atgcgtttta
     1381 ccattgatgt cacggcgctc cgccccatgc acgcccgcta acgggaagcg ataaggtttt
     1441 gccagtgcgt caagctccac cattgagcgc cctgatatca atgccaatgc accatcactt
     1501 gcggttgcca gtagctgtag tccttgcaga atattgtcag gcacgacgac ctgatcggga
     1561 tgcggtttga tttccagcgt tccatcgaga tcaaaaaacc aggcatattt cgcggatagt
     1621 tcaggggttt cggttaacgg ttctgtcacc cggttctcct acttctcttt tcttattgtt
     1681 ttgcgcagaa cgcgctttac agacatgtaa gtatagacag tgtgacgggg gtcgccattt
     1741 gcaacgaaga acagccaacc gttatggcgg ttggctgtgg tgggaaaaaa cgctaaattg
     1801 ttgcagaaaa aagcatcaga cagtgcgttt cgctttttgc ttgtaacggt cgaagatcac
     1861 cgctgccagc aggattaagc cgcgaaccac gtactgcgcg aaaggagaaa tattaagcag
     1921 gttcatggcg ttttccacgg tgcctaaaat taagataccc gccaccacat atgagatttt
     1981 tccgatgcct cctttcagag aaacgccacc taaaacgcag gcggagataa caatcagctc
     2041 gtaaccaatc gacgtcattg gctgcccact ggtcatacgt gaagccagaa taattccggc
     2101 tatcgcagat accaggccag agagaacaaa gataataatt ttggtgcgaa caaccggtac
     2161 acccgccaga cgcgcagcct cttcgttccc gccaatcgcc agggtgttac gaccaaaggt
     2221 ggttttattc agcaacaaac caaagataat cagacacgcg acggtgagcc agattggcgc
     2281 aggcagaccg aaccagttag cgtaaccaag ggcaaagaag ctttcatctt cgataccgac
     2341 cgctttaccg tctgaaatga tgtacgccag acctcgaaca atctgcatcg ttgccagtgt
     2401 tgtgatcaga gcatttattt tcagtttggc gataacaaag ccattgacca ggccacagag
     2461 aatgccaagc agcaaccccg ctgccacgcc aatccacagg ctttcagtca ggttgataac
     2521 caccgccgtg gtgacacccg cacaggcaat tacggaggcg acagaaaggt caaagtcacc
     2581 ggaagcaagg cagaacaaca tgccacacgc caccatcccc gacatggaaa ttgccaggcc
     2641 caaccctttc atattaatga aggtggcaaa atttgggaca aaaatggcac aggcgataaa
     2701 gagcaccgca aacaccacca gcatgccgta ctgatcccag atacgcccga agctgaatga
     2761 cgacttaggt gcgccagaac ccgatgtaga aacagaagac atcatactct ccttactcag
     2821 gcaactgcct ggctgacttt aggcatcgca aggctcagtg cctgacgctc atctgcctgc
     2881 tcgtgtaaca attcaccggc gatttcacct tcccgcatca ccacaatccg gtcggcaacg
     2941 ccgaggactt caggtaagtc gctggaggca aacagcaccg ccacaccctg cgccgccagc
     3001 gcataaatta cgttatatat ttcgtgctta gcaccaacat caatgccgcg cgtaggttca
     3061 tccagcaaaa tgaccttcat ctcttccgat aaccagcggc ccagaatggc tttttgctga
     3121 tttccgcctg agagattcat gatcagttgc tcagcgcccg gcgttttgat gttgagcgaa
     3181 cgaatgtgct gatcggcatt gttttcttcc caaccgttgt tgattacaca accgccgagc
     3241 acatgtttgc gtctggcact gatgttgata ttgtcgcgaa cggagtgcac gggaataatg
     3301 ccttccgctt tgcgatcttc cgggcagagc atcatgcctg cggcaatggc gtggctcggt
     3361 ttacgaatat cgatcggctg ttggtcgata taaacctgac cggcggtgat ttgcgtcccg
     3421 ccaaacaagc ctttcattaa ttcgctacgc cccgccccta ccagaccaaa cagcccaaca
     3481 atttcaccac tgcgaaccgc cagacttatt ggcgtacgca cgcctagtgc tttcacagca
     3541 tcaagacgca ggcgctcctc gccataacta cgaggttgcc agccgtagat atcgccaatg
     3601 tcgcgcccga ccatcgcctg caccagcgcg tcgtggtcaa cctgctgcat atcggtaaag
     3661 gttttgacat aacgtccatc tttaaagaca gtgatggcat cgctgagggc aaatatttct
     3721 tccatacggt gagaaacgta taagatcacc cgcccctctt ttcgcagttc acgaataacg
     3781 cggaaaagat tgtcgatttc gcgggcagaa agggagctgg ttggctcatc aaaggcgata
     3841 attttagcgt tacgcgccag cgccttggcg atttcaacca tctgccactg accaatggag
     3901 agatatttca gcggcgtgtc cgggtcaata tccataccaa gatgtttaag ttgtaaaccc
     3961 gcctcataat tcagcaatga gcgattcaca atgccgcctt tatgcggcag ctggccgaga
     4021 tagatgtttt ccgcgacggt catttccggc acgagatgca gttcctggta aataatcgcc
     4081 acacccgcgt taagtgctgc ggtcgtgtcg gaaaaggaca tttcctgccc attaatcact
     4141 acagaacccg tggttggcgc atagttgccg ctgaggattt ttaagagagt tgattttcct
     4201 gcgccatttt cacccatcaa cgcatgaacc tgaccggcat agcagtcaaa actaatatcc
     4261 gtcagcgcct taacgccggg aaacgtttta ccgatgccgc gaaatgagag atacggggta
     4321 gactgttgca taacgtctcc gtgaatcact ggtcgttcac accccctctg catcatgcag
     4381 aggggaattt ttccggcaaa ttacttaccg cctaaacctt ttttctccag ttcttcttta
     4441 aagttgtcac gcgtgatcag caccacgtcg gtaacttcgg taaattttgg cggttcaacg
     4501 tcttttgcta cccagttgta aagcatttcg ctggatttat agccatgtac gtccgggctt
     4561 ggcagcaggg aaccgtagaa gccggttgcc tgtactttag acagttcgct caccgcatcc
     4621 acaccgttaa tgccaatgcc gataatatca gcagctttaa agccctgacc ttccgtcgcg
     4681 cgtacgccgc ccagcacggt gctgtcgttc ataccgacga tcagccaatg tttaacttca
     4741 ggatgttgaa ccagcattga gttggcagcg tcaaatgccc ccgggatgtc gttagatttg
     4801 gtaggtacct gataaatttg tttttccggg aatccggccg ctttcagcgc atccatagat
     4861 cccgtagtac ggcggcgggc ggtatccagt tcgttggcgg taatcaccat caccgcgctt
     4921 tctttgacat cccagccacg tttctgcatc tctttataca gttcctgacc ctgacgttcg
     4981 ccaattttag tcgccgccat catcaccagc ggaacggtat ccattggctt acctttggcg
     5041 ttaacaaact gatcatccac ggcaatgact ttcatatcgt agccacgcgc tttcgcgacg
     5101 atggcagagc cgagtttggg gtccggagta caaataacga aaccttttgc gccactggca
     5161 gccaggctgt cgatcgcgtt caatgttttt tcgccatccg gcacggcaat cttaataacc
     5221 tcaaacccta aatccttccc ggctttatcg gcaaacttcc attcggtctg gaaccacggc
     5281 tcttccggtt gcttcaccag aaaaccgagc ttcaggttct ccgccatagc ggattgtgac
     5341 ataacggctg ccagaccaat ggctgccagg gctttagtaa atttgtgcat ggttctctcc
     5401 agctttagtg tcgttttgtg tagggcaaaa acgaatgaca ttcgttaaat taatcggaaa
     5461 acaaagcatt accttttaac taaaagataa gtgaccgtgt tgacatagtt ttagcgagaa
     5521 attaattctc cataggagag caatatcaca tcgcagaatt acagtgagaa cgtgcataaa
     5581 tttagcggga aaagacataa gggaaagcca atttgtcaga caaattgtcg aatgcacagc
     5641 agattaatcc ataagattag cttggaaatc cttgttgtct ttggtaccca tgcgggatgt
     5701 cttcttttta accagtcaat aggccacatt acctggcgtt gagtttttga aatggtgtaa
     5761 taaccgcaac tcaaagatgt ggaaaatgca cgtcattcat ttcgccatta attatcactg
     5821 tgctcattaa ttaacagaac acgtataatg agagccatct cgcaaaaatg aaaaaacgtt
     5881 ttataaaatc atcatttcat caatgaaatg taaaaatata taaacttgat gatttaagca
     5941 ttttcttata cccgttcaga cgttattctt atttcagatc atcgtcagaa ttgactccac
     6001 gatcacattt cggaccggca gaaaggaatt attctgcaaa cagtaattat ggtgttttga
     6061 tttatcttgc acctctccac ttctggatat aaggatatta ggtatggcaa ccgctggaat
     6121 gcttctcaaa ctcaactctc aaatgaaccg cgagttttac gcatccaatc tctaccttca
     6181 cctgagtaac tggtgttctg aacagagtct gaacggcacc gccactttcc ttcgcgccca
     6241 ggcacagagt aatgtgaccc aaatgatgcg catgtttaac tttatgaaga gtgtcggcgc
     6301 tacccccatc gttaaagcca ttgatgttcc cggtgaaaaa ctgaactctc tggaagaact
     6361 gttccaaaaa acgatggaag aatacgagca acgttctagt acgttggcac agttagccga
     6421 tgaagcgaaa gaactgaatg atgattcaac cgtcaatttc ctgcgcgatc tggaaaaaga
     6481 acagcagcat gatggtctgt tgctgcaaac cattcttgat gaagtgcgca gtgcgaaact
     6541 tgctggtatg tgcccagtgc agaccgacca acatgttctg aatgtcgtgt cgcatcagct
     6601 gcattgatca tacatcggcg ctaatgcatt gcgccgatga agtttttgag aaaccgctgc
     6661 ctcatctttt tgaagcagcg gttttttaat gggattcgcc ttgtggggta aacttgagtt
     6721 caatcagcgc gatggctttt tggattgccc gcatggtgac cgggtctgcg gcggcgggat
     6781 ggttactaaa gtcgatattc ttcagctgac tggacatttt ttcacgaact tcaacgggcg
     6841 cgattacatc gagaacatcc agaatttgtt tgataaccaa ctggcaagca accacatcag
     6901 aaaccagttc ctgatcggca ttcagcggct gggacatcgt aaactcctga tagcattttg
     6961 aaagccgtta tagtagcggc ttcacatctt cagcgatagt cacatccacc gtcatcagga
     7021 cacaaaaaaa cctgccggag caggtttttt gttatcggaa catattgcct ggcggtacgt
     7081 ctttgaacgt cttgcaatag ttattgaaca tacttttcag gattttgcgc agtttcatcg
     7141 cggcactccg accatttgtt atacatgtgt tattttcttt gcgcttataa tatgacagcc
     7201 atcacaaaaa tcaatcttta tgtgatgcaa atcacacaaa taccccctta atgttataaa
     7261 aatgataatc aaaaaacagc ccccccattt ctgacaccta cagatggcaa gaaatagcgc
     7321 ctgccaggcg tcttttccgg tcattgtcgc agcgctgtaa cgcgtaaaat agtgctttct
     7381 tttactcttc tggctggacc atgagacttc tgattctgac tctttcatta ataacgctgg
     7441 cggggtgtac ggttactcgc caagcccatg tgagcgaagt tgacgcggca acaggtattg
     7501 tacggttggt ttatgaccag gcttttttgc agcatgccca taccgatcgt tatgtcagtc
     7561 gcgggatcgc cgatcgcgca tgccagcagg aaggctatac ccacgcgatc ccctttggtc
     7621 agccagtagg caactgtagc ctttttgcgg gttccttatg tttgaatacg gaattcactt
     7681 tgtcatatca gtgccatcat tccgccttcc ctgtctttct ctaaatattt taatcagcga
     7741 ggggatcttc gctgattaaa gaaatagcgg taatgcgttt tattcccatt cgtattttta
     7801 ataattgaag tttatatttt accttttgca aataataaaa taacaaatta tagtgacgcc
     7861 acagcaacaa atataacctt tgtggagcac tatcatgctg aaaccagaaa tgattgaaaa
     7921 acttaatgag cagatgaacc tggaactgta ctcttcactg ctttatcagc aaatgagcgc
     7981 ctggtgcagc tatcatacct tcgaaggtgc tgccgcgttc ctgcgccgtc acgcccagga
     8041 agagatgacg catatgcagc atctgtttga ttacctgact gataccggca atttaccgcg
     8101 tattaatacc gttgaatctc cgtttgctga atattcctca cttgatgaat tattccagga
     8161 aacctataaa cacgaacaat taatcaccca gaaaattaac gaactggctc atgctgcaat
     8221 gaccaatcag gactacccaa catttaattt cctgcaatgg tatgtttctg agcagcatga
     8281 agaagagaaa ctgttcaaat cgattattga taaattaagc ctggcaggca aaagcggcga
     8341 aggtctgtat tttatcgaca aagaactctc taccctcgac acacaaaact aatgctctcc
     8401 ggcggcaggt ttactgccgc cgtttcaaat cagtgacggc aaatcttact ctgatcggtc
     8461 gaaaaaccgt ctttcgaagg tataaatttg ccttttgctg ccagaaacgc taccagctct
     8521 cccgctgtca tcccttctgc cgagcaggtg tgaaaacgtg cctgttcacc aaaacgcgct
     8581 ttaattgctg cttccagact ggcatgcgta tattgctcgc ctgattcaat catcatattt
     8641 aacacttcat gaccgtgaat agagtccatc gttcctcctc aaaaaaagcc tagcgtagcg
     8701 attgccgctt atgaagactt tgcgccagag cagaactgaa tgctttttat tgtacattta
     8761 tatttacacc atatgtaacg tcggtttgac gaagcagccg ttatgcctta acctgcgccg
     8821 cagatatcac tcataaagat cgtcaggaca gaagaaagcg tgaaaaacag aactctggga
     8881 agtgttttta tcgtggcggg aaccacaatt ggcgcaggca tgctggcaat gccgctggct
     8941 gcggcaggtg ttggttttag cgtcacgtta atcttgttga ttgggctttg ggcgttgatg
     9001 tgctacacgg cgctattact gctggaggtg taccagcatg ttccggcaga taccggtctg
     9061 ggcacgctgg caaaacgcta tctgggacgc tacggtcaat ggctgacggg cttcagtatg
     9121 atgttcttaa tgtatgctct gactgcggca tacatcagcg gtgccggtga attgttggcc
     9181 tccagcatca gcgactggac aggtatttca atgtcggcaa ccgctggcgt gctgttgttc
     9241 acttttgttg ccggtggcgt ggtttgtgtt ggaacatcgc tggtcgattt atttaaccgt
     9301 tttctgttca gcgccaaaat tatttttctg gtggtgatgc tggtattgct gctaccgcat
     9361 attcacaaag tgaatctttt aaccctgccg ttgcaacagg ggctggctct gtcagcaatc
     9421 ccggtgattt ttacctcatt tggttttcac ggtagcgtgc cgagtattgt cagctatatg
     9481 gatggcaacg ttcgtaagct acgcagggtg tttataaccg gtagtgcgat ccccctggtg
     9541 gcatatattt tctggcaggt ggcaacgctt ggcagcattg attcaacaac ctttatggga
     9601 ttgctggcta atcatgctgg attaaacggg ctgttacagg cgttacgcga aatggtggcc
     9661 tctccgcatg ttgagctggc agtgcattta tttgctgatt tagccctcgc cacgtcattt
     9721 ctcggcgttg cgttaggctt atttgattat ctggctgatt tatttcagcg ttcaaatacc
     9781 gttggtggac ggttgcaaac tggtgcaatt acctttctgc cgccgttggc gtttgcactg
     9841 ttttatccac gaggatttgt gatggcgctg ggttacgccg gtgtggcgct ggcggtactg
     9901 gcattgatta tcccttcgct gttgacctgg caaagcagaa agcacaatcc tcaggcgggt
     9961 taccgggtca aaggtggtcg tccggcgctg gtggtggtgt ttctctgtgg tattgctgtg
    10021 attggcgtgc aatttttgat tgcggcaggg ttgttaccag aagtggggtg atcagatagc
    10081 ctcaaattcc ttattgggtg ccagaattaa cgctgacacc caatttggcc tcttaatgca
    10141 ggcagcactg cttaaatttc ttaccactac cgcacgggca aggatcgtta cgccccggtt
    10201 tctcttctgc tttgatcggt tgctgaacag ctttttcctg cggatgcgcc atccagtacg
    10261 catgtagatc aagcgccgcc agtcgaatgg catctacgcg ctcttcaaac gcttctggcg
    10321 acatcttttc tacccgctcg aagttttcct cagtaccgtg cagcgcaatc gcctccagcg
    10381 ctggttttaa cgaatcgggc aacgttgacc agtcagaaag tgccacgccc cgcatatagc
    10441 caaagcacca ctcctcaaca atcgtcagct cgctgccatc aacttctcgc aagccgaata
    10501 acggctcaaa ctgctccggg aattcgttca gacgcgctgc ggtatcggcc atatgttgaa
    10561 aagccaggtt cataaagcgc gtcatctctt tctctgacgc ccagcgcggc acatagtcag
    10621 ccccacccca cacggcaacc agccactgtt ccggttcaat ctcttgcgga gaactcaaca
    10681 ccgccgtcaa taaatcgtcc agctccgcca catcaaggat ggcgtggtta gtgttgtatt
    10741 tggtcagaat atcgtccagc cattccaact cactttcgtt taacggtccc gttttcatac
    10801 gcttttcctt gtggatctca actcgccagc acctatctta catgccggtc cgtatcagag
    10861 atactttttg agtggctttg ccggtgatta aaaattaagg agggtgtaac gacaagttgc
    10921 aggcacaaaa aaaccacccg aaggtggttt cacgacactg cttattgctt tgattttatt
    10981 cttatctttc ccatggtacc cggagcggga cttgaacccg cacagcgcga acgccgaggg
    11041 attttaaatc ccttgtgtct accgattcca ccatccgggc tcgggaagaa agtggaggcg
    11101 cgttccggag tcgaaccgga ctagacggat ttgcaatccg ctacataacc gctttgttaa
    11161 cgcgccaaat tcttcaggcc tttcagccag acatccgctt gacgccgatg tcttttaaac
    11221 tggagcggga aacgagactc gaactcgcga ccccgacctt ggcaaggtcg tgctctacca
    11281 actgagctat tcccgcattc attaagcaat cagttaatca cttgatttta ttatcgcctg
    11341 gcaatcagtg ccgccgttcg atgcgttgca ttctacttac ctggagcgat gagtcaacga
    11401 tatttttcac cacttttgat cgtttgctga aaattacgcc gaaacgatca ctgatcaagc
    11461 aaatctgcac gcgcagcgct caaatattgc aacattgacc acagagtcag taccgcagcc
    11521 acaaagaaaa gtgcaatacc ggcgtactca acccaaatgt tcggacgcca cagcagccag
    11581 gccaacgcca ccatctgggc agtggttttc actttcccaa tccaggagac agccacgcta
    11641 ctgcgtttac ccaactccgc catccattcg cgtagcgcag aaataataat ttcacgggcg
    11701 atcatcgttg ccgccggtag ggtcacccac cagctgtgat aatgctcggt taccagcacc
    11761 atggcgatag ccacgagaac tttatctgct acagggtcaa ggaaagcacc aaaccgggta
    11821 ctctggttcc agcggcgtgc cagaaaacca tcgaaccagt cagtcaccgc cgcgacgcag
    11881 aaaatgagcg cggcggcaaa cggcgaccag gtgacaggca gataaaagac caatacaaag
    11941 aatgggataa ggatgacacg gaacagtgta agcaacgtag ggatattaaa ttgcataatg
    12001 acgggtaact atctgttgtc agtaagatta cccctatgtt gctacagaga catcaatgtt
    12061 tcaacgacca gaagatcttt tctgccagac cttgcgaaat acccggcact tttgcaattt
    12121 cctcgacgct ggcgttacgt aaaccttgca aaccgcccat atatttcaac aacatttgcc
    12181 gacgttttgg cccgacgcct tcaatggttt ccagggaact ggtatttttg accttcgccc
    12241 gttttttacg gtgcccgcca atcgcgtgat catgtgattc atcgcgaata tgctggataa
    12301 catgcagcgc gggtgaatct ggcggcaaac taaatccctc accttccggc tcaaagaaca
    12361 gcgtttccag tccagcctta cgatctgctc ctttggcaac gccaagtagc agcggatgat
    12421 ttttatccca tgagacatcc agttcggcga agacattttt cgcctgcgca agctggcctt
    12481 tgccgccgtc gataaggatc acatccggga tcttactgtc gtcaatggct ttaccataac
    12541 gccgacgcag cacctgattc atcgccgcat aatcatcgcc cggcgtgatg cctgtaatgt
    12601 tatagcgccg atactccgca cgcagcgggc cgttagcatc aaacaccaca caggaagcga
    12661 cggtttgttc gcccatggta tggctgatgt caaagcactc catccgcttc acttccggca
    12721 atttcaacac gctggcaagc gcggtcagtc gctggtgaac ggtagattgc tgcgaaagtt
    12781 tgctgattaa ggccgtcgcc gcattggtgc gcgcgagttt cagataacgc gccctatcgc
    12841 cgcgaggttt ggtttgaaca ttaatcttgc gtcccgccag ttctgaaagg gaatcggcga
    12901 gcagcgtttt atcgctaaga ttaaaatcga gcaggatctc acccggtaag gtgcgcatct
    12961 ggctgccttg taaatagaac tgacctacga aggtttctac cacctcgctc agttccgtac
    13021 cgccaggcac tttcgggaaa tagctgcggc tgccgagcac tttgccctga cgaatgaaca
    13081 atacgtggac acaagccatg cccgcatcga acgccacacc aataacgtca aggtcgttgc
    13141 cggtattgga aacaaactgt ttttcggtga cgcgtcgcac cgcctgaatt tggtcgcgaa
    13201 tacgtgccgc ttcttcaaac tccagattct gactggcagt ttccatacgg ctaatgagtt
    13261 gcgtaagcac ctgatcatct ttgccagaca aaaacaggcg cacatactcg acctgctgag
    13321 cgtattcttc ttcactcacc agtccttcaa cgcacggtcc cagacagcgc cctatctgat
    13381 attgcagaca cggacgcgag cgattgcgat aaacactatt ttcgcactgg cgaatgggga
    13441 aaatcttttg cagtagcgcc agagtttcac gtacggcata gccattcggg aacgggccga
    13501 aatattcacc tttggcatgc ttcgcaccac gatgcatcgc cagacgcggg tgggtatcgc
    13561 cactcaggaa gataaaagga taagatttat catcgcgtag caaaacgttg taacgcggct
    13621 gatagagttt gatgtagttg tgttccagca acagcgcttc ggtttctgta tgagtaaccg
    13681 ttacatcaat ttgctgaatc tgggcgacca gcgcttcggt tttgcgcgaa gcgaggttgc
    13741 tacggaaata gctggaaagc cgttttttca ggtctttcgc tttgcctaca tagataaccg
    13801 taccaccagc atcgtacatg cgataaacgc ctggctggct ggttacggtt tttaaaaacg
    13861 cttttgcgtc aaactgatca ctcactgact tgataatgtc tccgcattac acagaccatg
    13921 gcgaattgcc aggtgagtca gctcaacatc gccatgaatg tttagtttac tgaacatacg
    13981 atagcggtag ctgttcaccg ttttcggact gagattgagc tgttctgaga tctcattgac
    14041 cttctggccc ttggtgatca tcagcataat ctgcaattca cgttcagaca aactggcaaa
    14101 tgggctttct gttttttctg gttcgatctg gcttaacgcc atttgttgag cgatgtcaga
    14161 agcaatgtaa cgctgccctg aatagacaga acgaatcgca ctcacgactt cctgcggagc
    14221 cgcgcctttg ctgaggtagc ccgcagcacc ggcctgcatg actttcgctg gtaaagggtt
    14281 ttctgtatga acggtaagca tgatgatttt gacatcagct gtggaacgcg cgattttacg
    14341 cgtcgcctca agaccgccaa tgcccggcat actcatgtcc attagcacca cgtcaacggc
    14401 atttgtccgg caccacttaa cggcgtcttc accgcacgat gcctcaccga cgacttttat
    14461 accctttata tcttccagaa tgcgtcgtat ccctgcgcgc accagttcgt ggtcatcaac
    14521 aagtagaacg ttgatcaaag aaatatctcc agaaataggg ataacgctac tgatagttag
    14581 tcattcgtat attagcggtt tttattgcaa ctttgaaacg ttaaaaatgg tgggtattcg
    14641 atttttctct cgtttttgtc aattcgattg tccacagtta tggtcacgcc cgtcaccaac
    14701 ggcttaccag atcgtttcac agtaagccct acgatgaaat gtgacaaaaa ttgactttat
    14761 tcagcaaaaa tgaaaatcag cccgctgaat atgtaacatt aattaacccg aacaatacgg
    14821 gcaaaaacat tcatgataaa aatatttatt ggtcattata ttaacgtatt ttatagcact
    14881 gccgatatca cgctcaaaaa acaaccactg ctatttttag caaagcttat ggtatactcc
    14941 gccgccttaa catttttcac cgcaaatttt cattgcaaca tgacgaggaa aataaatgag
    15001 tacgcctgat ttttctactg ccgagaataa tcaagaactg gcaaatgaag tctcctgcct
    15061 gaaagcgatg ctgacgctga tgctgcaggc gatgggacaa gctgacgcgg gccgcgtgat
    15121 gttaaagatg gaaaaacagc ttgcgctgat cgaagacgaa acccaggctg cagtattttc
    15181 caaaacggtt aagcaaatta aacaagccta ccgtcagtaa tataaaaccg gctgagagcg
    15241 tgcctttcag ccggtttttg catctggcac gcagaaagaa aagcgatcaa attaagccag
    15301 tagcggccgc gtaacaggcc acctgggtct tatttggtgc attgattttt ttctgcatgt
    15361 ttttctgatg gaaattgacc gtattctcag agattgacaa aatcatcgct atctctgctg
    15421 atgtcttccc ttccgccgtc catttcagaa tttctttttc gcgcttgctg aaattcatct
    15481 ctggcgtcat cactatttca tcatttaaac gcatcagagc catcagactt tcgcgcacca
    15541 gtaactgcat ttttaattgc agttcatcac taagaatggg tatttcgcgc gtgctgcaac
    15601 gggaaaagga caaaaagccc agcgcccgat ttggcagcat taaatactga gtgacaccgc
    15661 ggcgtaaacc atgtgcgtgc gcggcttccc ataatggctg tgcttcgctg aataagtcat
    15721 cattccacat taaatggccc tgactaaagt tttcagggtt cagcacagga tcaattgcga
    15781 gaaaattttt tgcctgataa taactaaccc acgactcagg gtaattggtg tagaaagcca
    15841 ctttaggtcg cgtgaatggt accgggtggc gaacacataa cgaatagtaa tcgtactcca
    15901 gctgctgagc ctgaagctct atttcatggt agacctcttc tgcggcctcc atcctctgaa
    15961 aacgcaacag catcgtgcga cgccagctga aaaaatccgt atcctgcata gtaaaccgca
    16021 acgcccctga gagtgagtat catttataat gataattcaa actatcacat aaataagatt
    16081 tatatataat ttatattatt caggcaatga attacttttg caagccatcg cattctctta
    16141 tgttattaat gagttatgct gatttgttaa gcagttttat cacgcttgaa atggcgtccc
    16201 gccccgacag gtgaatcgtc ggggctgatt ttttcttatt attgcagcag aaacttctcg
    16261 aggaactgtc gggtgcgagg ctgctgggga tcggcaaata acgcttttgc tgccccctgc
    16321 tcgactatcc gccccaggtc cataaaaatc gcccggtccg caacatcccg ggcaaagctc
    16381 atttcgtgcg tcacaatcac catcgtgcgc ttttcctgcg ccagctggcg gattgtgttc
    16441 aggacttcgc ccaccagctc tggatccagc gctgacgttg gctcgtcaaa caaaatcacc
    16501 tcaggacgca ttgccagcgc acgcgcaatc gctacacgct gctgttgacc gccagacaaa
    16561 cgacgtggat agctggtttc tttaccggcc agcccaactt tcgccagcag ctcgcgagcg
    16621 cgcgccgtgg cctcttcttt cggttcgcct ttgacgatca ccggcccttc aataatgttt
    16681 tccagcaccg tacgatgcgg aaacaaatta aagttctgga agacaaaccc gacgtgctga
    16741 cgcaactggc gaatcagcga tttttgctga cttaatgaac gtgcagtatc aatagtgata
    16801 tcgccaacgg tgatcgttcc cgcttccggt tgttccagca gatttatgct gcgtagcaac
    16861 gtggttttgc cggaaccact cggaccgata attgccacca cttcgccagg ctttacctcg
    16921 aggtcgatac cgtgtagcac cgtctgaccg tggaattttt tcaccaggtt cttaacttca
    16981 atggcactca tttgggttct ctctcctggc gattaagttg attctcaaaa tggttctgca
    17041 acgtcgataa cacagtcgcc atgatccagt agatgagcga agccgccagg tacatggtga
    17101 acacctccag cgtgcgcgag gtaatcaact gcgcctgacg gaacagctcc ggcacctgga
    17161 ttgtcgcggc cagcgacgta tcttttacca gactgataaa gctgttcgac agcggcggca
    17221 acaccacccg cgccgcctgt ggcaaaatcg cgcgacgcat ggtctgccac ggcgtcatac
    17281 caatactggc agcggcttcc cactgacctt tatcaataga agaaatggcg gcgcgcagcg
    17341 tttcggcggc ataggcggca gtgttcagcg acagaccaat cattgctgac ggaatgggat
    17401 ctaattcgat accaaactgc ggcaggccgt aatagatcat aaacagttgt gcgatgagcg
    17461 gcgtaccacg aaaaatagag atataaaaac gcgccagcca gcgcacgggc cagattggcg
    17521 acaggcgcat cagcgcgaga ataaacccga gtagtaagcc aaaaaacatg ccgccgatac
    17581 tgagttgcag ggtataccca gcccctttca acaggaacgg caaggaatca ataaccagtt
    17641 gtatactttc ttgcatgagc gttcctggag ctaaacgtgg ggatgatagg cgaacagcgc
    17701 aggcgcgccg ccggtatgaa taaacagaat cggcccttca tctttgaagc gtttctgact
    17761 gataccgtca atcagccccg ccatcgcttt tccggtatac acaggatcaa gcagaatgcc
    17821 ttccagacgc gccagcaatt tcactgcttc catgccttcg tcgttcggca cgccgtagcc
    17881 aggtgcaaaa tagtcatccc agagtaaaat ttccgctgat gcggtcagct ccagttcttt
    17941 cgcaatcgcc tgttgtaggt taaccacttt cggcaattga tcggcaacgg aacgcgacac
    18001 ggtcacgcca atcagttcgc tttcaggcat caggtgttcc agcccaacag ccaatccggc
    18061 gtgagttccg gcactgcccg atgcgaccac caccgacgaa atattaaccg ccccttcaca
    18121 ctgttgcgcg atttccagcg cactctccac ataacccagc gcgcccagag cattagaacc
    18181 gccaaccgga atgacatacg ggcgaaagcc ttgtgcttcg actcgcgtcg ccagctcttc
    18241 cagttgggca ttgggatcgg tcagtgcgtc gcacatttca atctgggtat tgaacagatt
    18301 cagcaacaaa cgattgccgt tggttaaata gttttctgcg gttgtgccaa taggattttc
    18361 cagcagcgcc acgcagtgca ggccgagttt cgccgcaact gcggcagtct gccgcacatg
    18421 gttagactgg atcgcgccgg cagtaatcag cgtatcggca ccttcgcgca gggcatctgc
    18481 cgcgagaaat tccagcttac gtaatttatt gccgcccatt gccatgggtg tgacgtcatc
    18541 ccgtttgatg aaaatttccc gtccaagata atcagaaaag cgcggcagat attcgagcgg
    18601 cgttggcgcg ccgataaact ccagccgtgg aaaacgggtt aaattatgca gtggcataat
    18661 agcctccgat gtgtgttgtt gtgattttct tattatgcac gctgaaaacg cgtaaataaa
    18721 aaaggcgcta gtgaaagcgc ccttttttgt cattatgctg attatttggt cacatcagca
    18781 ccaaaccatt tttcggaaag ggcttgcaga gtgccatctt tttgcatttc cgcaattgca
    18841 tcgttcactg ctttcagcag gtcttcattt cctttacgca gcgccacgcc agactcctga
    18901 cgggagaatg cttcaccggt tactgccagc gtatcgttgg ttttcttcac cagatccagc
    18961 gccgccagac ggtcaacgag gatcgcatcg atacggccta cgcgcagatc ctgatatttg
    19021 gtcgggtcat catcataggt acgcacatcg acgccctgaa cattctgccg cagccactct
    19081 tcatagttgg tgcccagacc gacacccact tttttgcctt tcagatcagc agccgtttta
    19141 atggtgcctt cgttaccttt tttcaccagc gcctgaatac cagaaatggt gtacggggta
    19201 gagaaatcgt attttttctt gcgctcatca gaaatggtga cctgattaat caccacatca
    19261 atacgtttag agtccagcga cgctagcata ccgtcccatt tggtcggttt tagtgacgcc
    19321 tcaacgccaa gatgttttgc cagctgttgg gcaaattcca cttcaaaacc ggttaatttg
    19381 ccgtcatccc cctgaaaact gaacggcgga taagttcctt ccagccctac cagtagcgta
    19441 ccgcgctctt tgactttatt aagcagacct tcatctgcaa aacttttaac gctcatgccc
    19501 gcaaccagcg ccacggccat cacacccatc aatgcctgac gtcccagatg tgctaatttc
    19561 atattcaccc cgaatgttgt tatgtctgtt tgcagtgtag agccattgtt tgtaaacaca
    19621 aaaacaactc cgctacatct tattcttatt taatatatat cagaagcagg caggctggag
    19681 gatttctgca caagtccggt acacgtttga cgctgatagt gttgatactt ccgtaatgcg
    19741 atgcggtaat tgttggtgct ggtggtgggc agccacgggg cgaggatttc atcaaggaaa
    19801 ccgtcctgca gctgatcgag ggaaatattt tgctcatgta gatgattccc caaacggcgc
    19861 aaacgaacga catattcacg caccgtacct gggctcattt cagtttgctc aaaaagaaat
    19921 tgcttaaagc cgataatatc gaaaaaatca ctctgcgttt tgcaatgtaa atcaccgcaa
    19981 aatcggcaca atgccgccca tgactgttgt tccacttgcc agccattttc atcaagcagc
    20041 gtgtccaggc gggaaatctc gattttattc actattttgc cgtcgcgaac taaggtaatg
    20101 cgatcgagta atttacggca atgcgcgcaa tgggcctggc tgtgtttaaa gtctttaaga
    20161 tagcggctta atggccgtct tttcaggtgc tgcaccatca ttaagaactc ctggtagtca
    20221 aagttaaagt gcggcattta ctgacgttat aacttaccca gtttagtgct taaccgttta
    20281 atggcctggc tgtgtaactg actgacccgc gattccccga cctccagcac cgcgccaatc
    20341 tctttgagat tcagctcttc ctagtaatag agggttaata ccagtttttc gcgctccggc
    20401 aacgtttcga tagcttccat cacccgctgg cgcagattac tgtccagcag ttgttgtagc
    20461 gggttttctc gctgatgatc atcagtaacc agttcgatgc tatcgccgtg ctcttcgcgc
    20521 cactcatcgt aggagaaaag ctggctgtta ttggtgtcga gcaacatttg gcgataatcg
    20581 gcaatatcga tccctaaacg ttccgctacc tcagtttccg tggcgttgcg gccaagttcc
    20641 tgctccagtt accctattgc ctgtgccact tcacgcgcgt tgcgtcgcac gctgcgcggc
    20701 acccagtcac ggctgcgaag ttcatccagc atagcgccac ggatacgctg cactgcgtaa
    20761 gttgtaaatg ccgttccttg tagggcgtca tagcgttcga cggcattaag taacccaatg
    20821 ccgcccgcct gtagcagatc gtcaagttcc acgctcgcgg gcagtcgaac ctgcaggcgc
    20881 aatgcttcgt gacgcaccag cgggacataa cgctgccaca gcgagtgttt atccattaca
    20941 ccttcagcgg tatagagtga attcacgata aacagccctg cgttatatga gttatcggca
    21001 tgattatccg tttctgcagg gtttttaatc ggacgattag tgggtgaaat gaggggttat
    21061 ttgggggtta ccggtaaatt ccatgcagaa aaaaccccgc cggtggcggg gaagcacgtt
    21121 gctgacaaat tgcgctttat gttgccggat gcggcgtaaa cgccttatcc ggcctacaaa
    21181 aatgtgcaaa ttcaataaat tgcaattcac cttgtagacc tgataagtgc agcgcatcag
    21241 gcaatttggc gttgccgtca gtctcagtta atcaggttac gacgattaac cctgcagcag
    21301 agacagaacc tgctgcggta cctggttggc ttttgccagc acggagttac cggcctgctg
    21361 gatgatctgc gctttcgaca tgttggacac ttcggtcgca tagtcggcgt cctgaatacg
    21421 ggactgcgct tcagacaggt tggtagtggt gttgttcagg ttggtgactg cagaatccag
    21481 acggttctga atagcaccca gggatgaacg gaatttgtcg atggagctga tagcttcatc
    21541 cagggcagcc agaggatctt tggttgcagt gcctgcactg gtggtttcag tggtcagttt
    21601 gcctgtagag ttaacataag cctgtgcccc aacagtagct gcaaatttac cagttgcacc
    21661 tgcgccattt gaagctacag ttactgtacc ggtatcctta tcgacgttgt agttgatagt
    21721 gtaagatgcg gttgtggtga gctctttgtc tgcatcagta taggtgtcat tcgaattacc
    21781 agcaccatta gtattcgcac caccgaagga cgccgttgca gactgaatac ctgtattata
    21841 cttaattgtc gcaccagtaa ctgctgtgtt agccgttgca gcactctgca ctgtgctcag
    21901 tacagtatca gcgcttacag ttttggtgta ggttacgcca gaagttgccg ctgcaccaaa
    21961 gttataagtt gtgccagaca actggataga accagttgtc gctaaggtac taccgctagc
    22021 aaacagatcg gacaatttcg ctgaagatgc aatgccggcg ttgtttgtag ataggttacc
    22081 agtagcgtct aggtacgcgg ctttaccacc gatggtcaca tcgccattag catctacatc
    22141 aaacttcaca tcaccagtac tacgagtata aacacctgat gcagtagtgc cagccgctgg
    22201 tttcagagta ttcgcaaagt taacaacatc gccatctgca actgttgctt gagtggtgaa
    22261 gttcccttta gccgcatcat aagtatagat cgcagcactc gagccagtag tagtaactgt
    22321 atctccggtt ttcaggcgag acagtgcatc gctagcgctg agtactgtat tgtttgtggt
    22381 cacagcataa ggacctgttc ccgttgcacc agcagcggtc agatcgctga ctgtagcagc
    22441 tttgttcgca atagtgcctt tgccattcac gttaaaacca ttcagcccca gcgtatctga
    22501 gtcaattttc ttcagatcaa tcgtgatagt ctggccgtca ttcgcaccaa cctgaatttt
    22561 cattgaaccg tctttcgcca gtgcgttcac gccgttgaac tgggtctggc cagatacgcg
    22621 gtcaatttcg tccagacggg atttgatttc gtcctgaatg gagtccagat ccgaatcgga
    22681 gttagtcccg gtagaagcct gaaccgtcag ttcacgaata cgctgtaagt tgttgttgat
    22741 ttcggacagc gcgccttcag tggtctgcgc aacggagata ccgtcgttgg cgttacgggc
    22801 cgcctgagtc aggcctttaa tattagaagt aaaacggtta gcaatcgcct gacctgcggc
    22861 gtcatccttc gcgctgttaa tacgcaagcc agaagacaga cgctcgatag aactcgacag
    22921 cgcagactgg ttcttgttga tattattttg agtgatcagc gaaaggctgt tggtattaat
    22981 gacttgtgcc atgattcgtt atcctatatt gcaagtcatt gattacgtat tgggtttcca
    23041 cccgtcggct caatcgccgt caaccctgtt atcgtctgtc gtaaaacaac ctttagaatt
    23101 tttttcacaa acagccattt tttgttagtc gccgaaatac tcttttctct gccccttatt
    23161 cccgctatta aaaaaaacaa ttaaacgtaa actttgcgca attcaggccg ataaccccgg
    23221 tattcgtttt acgtgtcgaa agataaaagg aaatcgcatg gcaagtattt catcgctggg
    23281 agtcgggtca ggtctggatt taagttcaat ccttgatagc ctcaccgccg cgcaaaaagc
    23341 gacgctaacc cctatttcaa atcagcaatc gtcgtttacc gctaaactta gcgcctacgg
    23401 tacgctgaaa agcgcgctga cgactttcca gaccgccaat actgcattgt ctaaagccga
    23461 tcttttttcc gccaccagca ctaccagcag caccaccgcg ttcagtgcca ccactgcggg
    23521 taacgccatc gccgggaaat acaccatcag cgtcacccat ctggcgcagg cgcaaaccct
    23581 gaccacgcgc accaccagag atgatacgaa aacggcgatc gccaccagcg acagcaaact
    23641 caccattcaa caaggcggcg acaaagatcc gattaccatt gatatcagcg cggctaactc
    23701 atcgttaagc gggatccgtg atgctatcaa caacgcaaaa gcgggcgtaa gtgcgagcat
    23761 cattaacgtg ggtaacggtg aatatcgtct gtcagtcaca tcaaatgaca ccggccttga
    23821 taatgcgatg acactctcgg tcagcggtga tgatgcgcta caaagtttta tgggctatga
    23881 cgccagtgcc agcagcaacg gtatggaggt ctcggtcgcc gcccagaatg cgcagctgac
    23941 ggtcaacaac gtcgccattg agaacagcag caacaccatc agcgacgcgc tggaaaacat
    24001 caccctgaac ctgcacgatg tcaccacggg caaccagacg ctaaccatca ctcaggacac
    24061 ctccaaagcg caaacggcga ttaaagactg ggtgaatgcc tataactcgt taatagatac
    24121 cttcagtagc ctgaccaaat acaccgccgt agatgcggaa gctgatagcc agagttctag
    24181 caatggcgca ctgctcggcg actccacgct gcggacgatt cagacgcagt tgaagtcgat
    24241 gctgagtaat accgtcagtt cttccagcta taaaacgctg gcgcagattg gtatcacgac
    24301 cgatcccagc gatggcaaac tggaactgga tgccgacaaa ctcaccgctg cactgaaaaa
    24361 agatgccagc ggcgtaggtg cattgattgt tggcgatggt aaaaaaaccg gcatcacgac
    24421 caccatcggc agcaacctga ccagttggct ttcgacaacg ggcattatta aagccgctac
    24481 cgatggcgtt agtaagaccc tgaataagtt aactaaagac tacaacgccg ccagcgatcg
    24541 cattgatgcg caggtcgcgc gctacaaaaa acaatttacc caactggacg ttttaatgac
    24601 ctcgttaaac agcaccagca gctacttaac gcagcagttc gaaaacaaca gtaattccaa
    24661 gtaatcatta ttcatcggga gataggtcat gtacgcggca aaaggcaccc aggcctatgc
    24721 acaaattggc gtcgaaagcg ccgtaatgag cgccagccag cagcagctgg tcaccatgct
    24781 atttgatgga gtgctgagcg cactggttag agcgcgcctg tttatgcagg acaacaatca
    24841 gcaaggcaaa ggcgtctctt tgtcaaaagc gatcaacatc attgagaacg gactgcgggt
    24901 gagtcttgat gaagagagca aagacgaact aacccaaaac ttgattgctc tttatagcta
    24961 tatggtcagg cgcttgctgc aagccaattt acgcaacgat gtctccgcag tcgaagaagt
    25021 ggaagcatta atgcgcaata ttgccgatgc ctggaaagag tcgttactct ccccttcttt
    25081 gattcaggac ccagtctgat gaaccatgca ccgcatttgt atttcgcctg gcaacaactc
    25141 gtcgaaaaaa gccagctcat gttacgcctg gcaacggaag aacaatggga cgaactcatc
    25201 gccagcgaaa tggcgtatgt gaatgcggtg caggagtata gcacacctga ctgaagaggt
    25261 tgccccgtcc accacgatgc aggagcagct ccgcccgatg ctgcgcctga ttcccgacaa
    25321 cgaaagcaag gtaaagcagt tattacagat tcgtatggat gaactggcga aactggtcgg
    25381 tcagtcatcg gtgcaaaaat cggtgttaag tgcctatggc gatcagggcg gctttgtgct
    25441 ggctccgcaa gataacttct cgtgaatctt aacgagctaa tggttcgcga ataatccgat
    25501 tacggctacg cttctaatgt tccccttgaa tggagtcgaa gaatgcgtaa tcccacgctg
    25561 ttacaatgtt ttcactggta ttacccggaa ggcggtaagc tctggcctga actggccgag
    25621 cgcgccgacg gttttaatga tattggtatc aatatggtct ggttgccgcc cgcctataaa
    25681 ggcgcatcgg gcgggtattc ggtcggctac gactcctatg atttatttga tttaggcgag
    25741 tttgatcaga aaggcagcat ccctactaaa tatggcgata aagtacaatt gctggccgcc
    25801 attgacgccc tgaaacgtaa tgacattgcg gtgctgttgg acgtggtagt caaccacaaa
    25861 atgggcgcgg atgaaaaaga agctattcgc gtgcagcgtg taaatgctga cgaccgtacg
    25921 caaattgatg aagaaatcat tgagtgcgaa ggctggacgc gttacacctt ccccgcccgt
    25981 gccgggcaat actcacagtt tatctgggat ttcaaatgtt ttagcggtat cgaccatatc
    26041 gaaaaccctg atgaagatgg catatttaaa attgttaacg actacaccgg cgaaggctgg
    26101 aacgatcagg ttgatgatga attaggtaat ttcgattatc tgatgggcga gaatatcgat
    26161 tttcgcaatc atgccgtgac ggaagagatt aaatactggg cgcgctgggt gatgggacaa
    26221 acgcaatgcg acggttttcg tcttgatgcg gtcaaacata ttccggcgtg gttttataaa
    26281 gagtggatcg aacacgtaca ggaagttgcg ccaaagccgc tgtttattgt ggcggagtac
    26341 tggtcgcatg aagtcgataa actgcaaacg tatattgatc aggtggaagg caaaaccatg
    26401 ctgttcgatg cgccgctgca gatgaaattc catgaagcat cgcgcatggg gcgcgactac
    26461 gacatgacgc agattttcac gggtacatta gtggaagccg atcctttcca cgccgtgacg
    26521 ctcgttgcca atcacgacac ccaaccgttg caagccctcg aagcgccggt cgaaccgtgg
    26581 tttaaaccgc tggcgtatgc cttaattttg ttgcgggaaa atggcgttcc ttcggtattc
    26641 tatccggacc tctacggtgc gcattacgaa gatgtcggtg gtgacgggca aacctatccg
    26701 atagatatgc caataatcga acagcttgat gagttaattc tcgcccgtca gcgtttcgcc
    26761 cacggtgtac agacgttatt tttcgaccat ccgaactgca ttgcctttag ccgcagtggc
    26821 accgacgaat atcccggctg cgtggtggtc atgtcgaacg gggatgatgg cgaaaaaacc
    26881 attcatctgg gagagaatta cggcaataaa acctggcgtg attttctggg gaaccggcaa
    26941 gagagcgtaa taaccgacga acacggcgaa gcaaccttct tttgcaacgg cggcagcgtc
    27001 agcgtgtggg ttatcgaaga ggtgatttaa attcatcccc ggcggcaagc cggggagatt
    27061 tcattacggc agtggcgtcg gtaacggcgc tttatccagc gcggcggcac actctgccgt
    27121 cgggcgatcc acacgctcca tcgtcatacc atcgtactca atggtgttac cgtcacgctc
    27181 aacctcgtac agctcacgtt ttacggtaac gttagtgaga tcatcagaca tcaatgtcaa
    27241 cttacccggc acagcaatca cccgctgcca ctgacggcaa tccagagtat caccctcttt
    27301 agtgacaatc aggctgccta tcgcttccgg actgaccagc gcacgttgcg gccctttggt
    27361 ctgccagtag cccgccagcc agtccggcgc gggggttttc acgacattgt tatagttttc
    27421 gacttcggca cagcccgcca gcaacatgag cgcgcctgca attgcgagtt ttttcatcat
    27481 tcgtcctgca tgagaagaaa agaggattgt ggcattaaag ccctgatgtc gccagccttt
    27541 ccaggttcag agagaaattt gatctaacta ttatttttgt gaattattac cccgaaaata
    27601 aatttgcatg atgtatgatt cgcgactctt gtttcaaacc ttctgagttc agaggctaca
    27661 ttcatgtcat ggcagcaatt caaacacgcc tggttgatta aattctgggc acccatccct
    27721 gcggtcatcg cggcgggtat tctctccact tactattttg gcattactgg caccttttgg
    27781 gctgtcacgg gtgaatttac ccgttggggc ggccagctcc tgcagctgtt tggcgtccat
    27841 gctgaagagt ggggttattt taaaattatc catctggaag gatcgccatt aacccgcatc
    27901 gacgggatga tgatcctcgg catgtttggc ggctgctttg ccgcagcgct gtgggccaac
    27961 aatgtcaaac tgcgcatgcc acgcagccgt atccgcatta tgcaggccat tattggcggt
    28021 attatcgctg gttttggcgc gcgtctggca atgggctgta acctggcggc gttctttacc
    28081 ggtattcctc agttctcgct gcatgcctgg ttctttgcca tcgccactgc cattggttca
    28141 tggtttggcg cacgctttac cctgctgccc atcttccgta ttcccgtgaa aatgcagaaa
    28201 gtttctgccg cctcaccgct gacgcaaaaa ccggatcagg cgcggcgtcg ttttcgtctc
    28261 gggatgctgg tctttttcgg tatgctgggc tgggcgctgc tcacggcgat gaaccaacca
    28321 aaactggggc tggcaatgct gtttggcgtc ggctttggtt tactgattga acgtgcgcaa
    28381 atctgcttta cttcggcgtt ccgcgatatg tggatcaccg gacgtaccca tatggcgaaa
    28441 gcaatcatta tcggtatggc ggtgagtgcc atcgggatct tcagttacgt acagttaggc
    28501 gttgaaccca aaatcatgtg ggcgggacca aacgcggtaa ttggtggttt actgtttggt
    28561 tttggcatcg tgctggcagg cggctgcgaa accggctgga tgtaccgcgc ggtagaaggc
    28621 caggtgcact actggtgggt cggtctgggc aatgtgatcg gctcgacgat tctggcgtat
    28681 tactgggatg atttcgctcc ggggctggcc accgactggg acaaaatcaa cctgctgaaa
    28741 acctttggcc cgatgggtgg cctgctggtg acatatttgc tgttgtttac tgcgctgatg
    28801 ttgattatcg gctgggaaaa acgcttcttc cgccgtgcgg caccgcagac tgctaaggag
    28861 atcgcatgaa aaatatcgtt cctgattacc gccttgatat ggtgggtgaa ccctgccctt
    28921 atccggcagt cgcaaccctt gaggcgatgc cgcagttaaa aaaaggggaa atcctggaag
    28981 tggtgagcga ctgtccacag tcgatcaata atattccact ggatgcgcgt aatcacggct
    29041 atacggtgcg ggatattcag caagacgggc cgaccattcg ttatttaatt cagaagtaat
    29101 ccctcattcc cgctgtggcc cacagcggga acatcgttgc ctctgacaca tagattttac
    29161 ccgccccctc tcctattctt ttcagtatga tctcaggagg tttctatgtg tggacgcttt
    29221 gcccaatccc aaacgcgtga agattacctt gcgcttctcg cggaagatat tgaacgcgat
    29281 attccctacg atcccgaacc cattggcaga tacaacgtcg cgccgggaac caaagttctt
    29341 ctgctcagtg aacgtgatga acaccttcat ctggatccgg ttttctgggg atatgctccc
    29401 ggatggtggg ataaaccgcc gctgattaac gcccgcgtag aaactgccgc aaccagtcgc
    29461 atgtttaaac cgctctggca acatggtcgg gcaatctgtt ttgccgatgg ctggtttgag
    29521 tggaaaaaag aaggcgacaa aaaacagcct ttttttatct atcgtgctga tggacaacct
    29581 atttttatgg ccgcgatagg tagcacacca tttgagcatg gtgacgaagc cgaaggattt
    29641 ttaattgtca ctgctgcagc agaccagggt ctggtagaca ttcatgaccg ccgcccgctg
    29701 gttctgtcgc cagaagctgc acaggaatgg atgcggcaag agattggcgg taaagaagca
    29761 tcagaaattg ctaccaacgg ctgtgtgcca gcaaaccagt tcacctggca cccggtatcg
    29821 cgcgcggtag gtaatgtcaa aaaccagggc gcggagttaa ttcaacctgt ttgttgacat
    29881 cctccacgcc ctgaaggacg aggctccctg ctacgttcag gctgtcgcct gaatcatttc
    29941 ggtgggttcc tgcttcaacg ggcggcctg
//
LOCUS       DADMHC010000028        29705 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.028, whole genome shotgun sequence.
ACCESSION   DADMHC010000028 DADMHC010000000
VERSION     DADMHC010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29705)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29705)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29705
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.028"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..362
                     /gene="sxy"
                     /locus_tag="JNZ57_001039"
     CDS             <1..362
                     /gene="sxy"
                     /locus_tag="JNZ57_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CRP-S regulon transcriptional coactivator Sxy"
                     /protein_id="HAY8827338.1"
                     /translation="NQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILG
                     EVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQELA
                     EWADSLTPKQEFPAELE"
     gene            complement(325..2487)
                     /gene="yccS"
                     /locus_tag="JNZ57_001040"
     CDS             complement(325..2487)
                     /gene="yccS"
                     /locus_tag="JNZ57_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309071.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HAY8827339.1"
                     /translation="MAFMLSPLLKRYTWNSAWLYYARIFIALCGTTAFPWWLGDVKLT
                     IPLTLGMVAAALTDLDDRLAGRLRNLIITLFCFFIASASVELLFPWPWLFAIGLTLST
                     SGFILLGGLGQRYATIAFGALLIAIYTMLGTSLYEHWYQQPMYLLAGAVWYNVLTLIG
                     HLLFPVRPLQDNLARCYEQLARYLELKSRMFDPDIEDESQAPLYDLALANGLLMATLN
                     QTKLSLLTRLRGDRGQRGTRRTLHYYFVAQDIHERASSSHIQYQTLREHFRHSDVLFR
                     FQRLMSMQGQACQQLSRCILLRQPYQHDPHFERAFTHIDDALERMRDNGAPADLLKTL
                     GFLLNNLRAIDAQLATIESEQAQALPHNNDENELADDSPHGLSDIWLRLSRHFTPESA
                     LFRHAVRMSLVLCFGYAIIQITGMHHGFWILLTSLFVCQPNYNATRHRLKLRIIGTLV
                     GIAIGIPVLWFVPSLEGQLVLLVITGVLFFAFRNVQYAHATMFITLLVLLCFNLLGEG
                     FEVALPRVIDTLIGCAIAWAAVSYIWPDWQFRNLPRMLERATEANCRYLDAILEQYHQ
                     GRDNRLAYRIARRDAHNRDAELASVVSNMSSEPNVTPQIREAAFRLLCLNHTFTSYIS
                     ALGAHREQLTNPEILAFLDDAVCYVDDALHHQPADEERVNEALASLKQRMQQLEPRAD
                     SKEPLVVQQVGLLIALLPEIGRLQRQITQVPQETPVSA"
     gene            complement(2497..2943)
                     /locus_tag="JNZ57_001041"
     CDS             complement(2497..2943)
                     /locus_tag="JNZ57_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YccF domain-containing protein"
                     /protein_id="HAY8827340.1"
                     /translation="MRTVLNILNFVLGGFATTLGWLLATLVSIVLIFTLPLTRSCWEI
                     TKLSLVPYGNEAIHVDELNPAGKNVLLNTGGTVLNIFWLIFFGWWLCLMHIATGIAQC
                     ISIIGIPVGIANFKIAAIALWPVGRRVVSVETAQAAREANARRRFE"
     gene            3066..5120
                     /gene="helD"
                     /locus_tag="JNZ57_001042"
     CDS             3066..5120
                     /gene="helD"
                     /locus_tag="JNZ57_001042"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase IV"
                     /protein_id="HAY8827341.1"
                     /translation="MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLL
                     AIHCKRGLVWGELEFVLPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGV
                     LRQQLDLIATRTGENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQ
                     AWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGA
                     GSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFH
                     ALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQ
                     WSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLM
                     APLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALL
                     AALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRI
                     GKVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILIL
                     ARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARES
                     IMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPVAR
                     KP"
     gene            complement(5152..5610)
                     /gene="mgsA"
                     /locus_tag="JNZ57_001043"
     CDS             complement(5152..5610)
                     /gene="mgsA"
                     /locus_tag="JNZ57_001043"
                     /EC_number="4.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415483.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal synthase"
                     /protein_id="HAY8827342.1"
                     /translation="MELTTRTLPARKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA
                     TGTTGNLISRATGMNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDV
                     KALLRLATVWNIPVATNVATADFIIQSPHFNDAVDILIPDYQRYLADRLK"
     gene            complement(5706..6368)
                     /locus_tag="JNZ57_001044"
     CDS             complement(5706..6368)
                     /locus_tag="JNZ57_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2057 family protein"
                     /protein_id="HAY8827343.1"
                     /translation="MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLL
                     RGADSIELDNGPHQLVFRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLE
                     NEREANHFDAAPRLELLDGDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASL
                     PQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQP
                     SS"
     gene            6541..6954
                     /locus_tag="JNZ57_001045"
     CDS             6541..6954
                     /locus_tag="JNZ57_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HAY8827344.1"
                     /translation="MKETDIAGILTSTHTIALVGASDKPDRPSYRVMKYLLDQGYHVI
                     PVSPKVAGKTLLGQQGYGTLADVPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWMQL
                     GVINEQAAVLARDAGLNVVMDRCPAIEIPRLGLAK"
     gene            complement(6999..7316)
                     /gene="hspQ"
                     /locus_tag="JNZ57_001046"
     CDS             complement(6999..7316)
                     /gene="hspQ"
                     /locus_tag="JNZ57_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HspQ"
                     /protein_id="HAY8827345.1"
                     /translation="MIASKFGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVND
                     ELRAAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQLQAPR
                     LRN"
     gene            complement(7374..8564)
                     /gene="rlmI"
                     /locus_tag="JNZ57_001047"
     CDS             complement(7374..8564)
                     /gene="rlmI"
                     /locus_tag="JNZ57_001047"
                     /EC_number="2.1.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytosine(1962)-C(5))-methyltransferase
                     RlmI"
                     /protein_id="HAY8827346.1"
                     /translation="MSVRLVLAKGREKSLLRRHPWVFSGTVARMEGKASLGETIDIVD
                     HQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSY
                     RLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALVSALQTLYPECAIYDRSDVA
                     VRKKEGMELTLGLVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRY
                     VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFV
                     RDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGI
                     LLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFA
                     CRVM"
     gene            8659..8937
                     /gene="yccX"
                     /locus_tag="JNZ57_001048"
     CDS             8659..8937
                     /gene="yccX"
                     /locus_tag="JNZ57_001048"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HAY8827347.1"
                     /translation="MSKVCIIAWVYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSV
                     EVVACGEEGQVEKLMQWLKSGSPRSARVERVLSEPHHPSGELTDFRIR"
     gene            complement(8934..9263)
                     /gene="tusE"
                     /locus_tag="JNZ57_001049"
     CDS             complement(8934..9263)
                     /gene="tusE"
                     /locus_tag="JNZ57_001049"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309080.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusE"
                     /protein_id="HAY8827348.1"
                     /translation="MLIFEGKEIETDTEGYLKESSQWSEPLAVVIAENEGISLSPEHW
                     EVVRFVRDFYLEFNTSPAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGL
                     PKPVKCI"
     gene            complement(9354..10013)
                     /gene="yccA"
                     /locus_tag="JNZ57_001050"
     CDS             complement(9354..10013)
                     /gene="yccA"
                     /locus_tag="JNZ57_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000375124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease modulator YccA"
                     /protein_id="HAY8827349.1"
                     /translation="MDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTV
                     LMLPSPGLILTLVGMYGLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGM
                     GDVIAMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPAL
                     HLAISAVFILISSGAILFETSNIVHGGETNYIRATVSLYVSLYNIFVSLLSILGFASR
                     D"
     gene            complement(10220..10307)
                     /locus_tag="JNZ57_001051"
     tRNA            complement(10220..10307)
                     /locus_tag="JNZ57_001051"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10271..10273),aa:Ser,seq:tga)
     gene            10734..11852
                     /gene="hyaA"
                     /locus_tag="JNZ57_001052"
     CDS             10734..11852
                     /gene="hyaA"
                     /locus_tag="JNZ57_001052"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 1 small subunit"
                     /protein_id="HAY8827350.1"
                     /translation="MNNEETFYQAMRRQGVTRRSFLKYCSLAATSLGLGAGMAPKIAW
                     ALENKPRIPVVWIHGLECTCCTESFIRSAHPLAKDVILSLISLDYDDTLMAAAGTQAE
                     EVFEDIITQYNGKYILAVEGNPPLGEQGMFCISSGRPFIEKLKRAAAGASAIIAWGTC
                     ASWGCVQAARPNPTQATPIDKVITDKPIIKVPGCPPIPDVMSAIITYMVTFDRLPDVD
                     RMGRPLMFYGQRIHDKCYRRAHFDAGEFVQSWDDDAARKGYCLYKMGCKGPTTYNACS
                     STRWNDGVSFPIQSGHGCLGCAENGFWDRGSFYSRVVDIPQMGTHSTADTVGLTALGV
                     VAAAVGVHAVASAVDQRRRHNQQPTETEHQPGNEDKQA"
     gene            11849..13642
                     /gene="hyaB"
                     /locus_tag="JNZ57_001053"
     CDS             11849..13642
                     /gene="hyaB"
                     /locus_tag="JNZ57_001053"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase large subunit"
                     /protein_id="HAY8827351.1"
                     /translation="MSTQYETQGYTINNAGRRLVVDPITRIEGHMRCEVNINDQNVIT
                     NAVSCGTMFRGLEIILQGRDPRDAWAFVERICGVCTGVHALASVYAIEDAIGIKVPDN
                     ANIIRNIMLATLWCHDHLVHFYQLAGMDWIDVLDALKADPRKTSELAQSLSSWPKSSP
                     GYFFDVQNRLKKFVEGGQLGIFRNGYWGHPQYKLPPEANLMGFAHYLEALDFQREIVK
                     IHAVFGGKNPHPNWIVGGMPCAINIDESGAVGAVNMERLNLVQSIITRTADFINNVMI
                     PDALAIGQFNKPWSEIGTGLSDKCVLSYGAFPDIANDFGEKSLLMLGGAVINGDFNNV
                     LPVDLVDPQQVQEFVDHAWYRYPNDQVGRHPFDGITDPWYNPGDVKGSDTNIQQLNEQ
                     ERYSWIKAPRWRGNAMEVGPLARTLIAYHKGDAATVESVDRMMSALNLPLSGIQSTLG
                     RILCRAHEAQWAAGKLQYFFDKLMTNLKNGNLATASTEKWEPATWPTECRGVGFTEAP
                     RGALGHWAAIRDGKIDLYQCVVPTTWNASPRDPKGQIGAYEAALMNTKMAIPEQPLEI
                     LRTLHSFDPCLACSTHVLGDDGSELISVQVR"
     gene            13661..14368
                     /gene="hyaC"
                     /locus_tag="JNZ57_001054"
     CDS             13661..14368
                     /gene="hyaC"
                     /locus_tag="JNZ57_001054"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase b-type cytochrome subunit"
                     /protein_id="HAY8827352.1"
                     /translation="MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLP
                     SVSGEATYLFYMGYIRLIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWW
                     QGVWYEIRWYLFLAKRPSANIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIF
                     APFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDDTVISTMV
                     NGYRSHKFGKISNKECS"
     gene            14365..14952
                     /locus_tag="JNZ57_001055"
     CDS             14365..14952
                     /locus_tag="JNZ57_001055"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 1 maturation protease"
                     /protein_id="HAY8827353.1"
                     /translation="MSEQRVVVMGLGNLLWADEGFGVRVAERLYAHYHWPEYVEIVDG
                     GTQGLNLLGYVESASHLLILDAIDYGLEPGTLRTYAGERIPAYLSAKKMSLHQNSFSE
                     VLALADIRGHLPAHIALVGLQPAMLDDYGGSLSELAREQLLAAEQSALAQLAAWGSVP
                     QPANESRCLNYDCLSMENYEGVRLRQYRMTQEEQG"
     gene            14949..15347
                     /gene="hyaE"
                     /locus_tag="JNZ57_001056"
     CDS             14949..15347
                     /gene="hyaE"
                     /locus_tag="JNZ57_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-1 operon protein HyaE"
                     /protein_id="HAY8827354.1"
                     /translation="MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSD
                     PKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGVFRFPTTLVFTGGN
                     YRGVLNGIHPWAELINLMRGLVEPQQERAS"
     gene            15344..16201
                     /locus_tag="JNZ57_001057"
     CDS             15344..16201
                     /locus_tag="JNZ57_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein"
                     /protein_id="HAY8827355.1"
                     /translation="MSETFFHLLGPGTQPNDDSFSMNPLPITCQVNDEPSMAALEQCA
                     HSPQVIALLNELQHQLSERQPPLGEVLAVDLLNLNADDRHFINTLLGEGEVSVRIQQA
                     DDSKSEIQEAIFCGLWRVRRRRGEKLLEDKLEAGCAPLALWQAATQNLLPTDSLLPPP
                     IDGLMNGLPLAHELLAHVRNPDAQPHSINLTQLPISEADRLFLSRLCGPGNIQIRTIG
                     YGESYINATGLRHVWHLRCTDTLKGPLLESYEICPIPEVVLAAPEDLVDSAQRLSEVC
                     QWLAEAAPT"
     gene            16335..17879
                     /gene="appC"
                     /locus_tag="JNZ57_001058"
     CDS             16335..17879
                     /gene="appC"
                     /locus_tag="JNZ57_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-II oxidase subunit 1"
                     /protein_id="HAY8827356.1"
                     /translation="MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTG
                     KTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWAFYSNYVGDIFGAPLAMEALM
                     AFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFD
                     IDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERDVALR
                     SFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPE
                     QDQERNAFAIKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQG
                     NREPHVLQAFRELEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRI
                     MVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQP
                     WAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQ
                     PTQQQG"
     gene            17891..19027
                     /gene="appB"
                     /locus_tag="JNZ57_001059"
     CDS             17891..19027
                     /gene="appB"
                     /locus_tag="JNZ57_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HAY8827357.1"
                     /translation="MFDYETLRFIWWLLIGVILVVFMISDGFDMGIGCLLPLVARNDD
                     ERRIVINSVGAHWEGNQVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCSLFFRPL
                     AFDYRGKIADARWRKMWDAGLVIGSLVPPVVFGIAFGNLLLGVPFAFTPQLRVEYLGS
                     FWQLLTPFPLLCGLLSLGMVILQGGVWLQLKTVGVIHLRSQLATKRAALLVMLCFLLA
                     GYWLWVGIDGFVLLAQDANGPSNPLMKLVAVLPGAWMNNFVESPVLWIFPLLGFFCPL
                     LTVMAIYRGRPGWGFLMASLMQFGVIFTAGITLFPFVMPSSVSPISSLTLWDSSSSQL
                     TLSIMLVIVLIFLPIVLLYTLWSYYKMWGRMTTETLRRNENELY"
     gene            19040..19132
                     /gene="cbdX"
                     /locus_tag="JNZ57_001060"
     CDS             19040..19132
                     /gene="cbdX"
                     /locus_tag="JNZ57_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-II oxidase subunit CbdX"
                     /protein_id="HAY8827358.1"
                     /translation="MWYLLWFVGILLMCSLSTLVLVWLDPRLKS"
     gene            19212..20510
                     /locus_tag="JNZ57_001061"
     CDS             19212..20510
                     /locus_tag="JNZ57_001061"
                     /EC_number="3.1.3.2"
                     /EC_number="3.1.3.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AppA family phytase/histidine-type acid
                     phosphatase"
                     /protein_id="HAY8827359.1"
                     /translation="MKAILIPFLSLLIPLTSQSAFAQSEPELKLESVVIVSRHGVRAP
                     TKATQLMQDVTPDAWPTWPVKLGWLTPRGGELIAYFGHYQRQRLVADGLLAKKGCPQP
                     GQVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQADTSSPDPLFNPLKTGVCQLDNA
                     NVTDAILSKAGGSIADFTGHRQTAFRELERVLNFPQSNLCLKREKQDESCSLTQALPS
                     ELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDSHQWNTLLSLHNAQF
                     YLLQRTPEVARSRATPLLDLIMAALTPHPPQKQAYGVTLPTSVLFIAGHDTNLANLGG
                     ALELNWTLPGQPDNTPPGGELVFERWRRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNT
                     PPGEVKLTLAGCEERNAQGMCSLAGFTQIVNEARIPACSL"
     gene            complement(20625..22805)
                     /gene="etk"
                     /locus_tag="JNZ57_001062"
     CDS             complement(20625..22805)
                     /gene="etk"
                     /locus_tag="JNZ57_001062"
                     /EC_number="2.7.10.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein kinase"
                     /protein_id="HAY8827360.1"
                     /translation="MTTKNMNTPPGSTQENEIDLLRLVGELWDHRKFIISVTALFTLI
                     AVAYSLLSTPIYQADTLVQVEQKQGNAILSGLSDMIPNSSPESAPEIQLLQSRMILGK
                     TIAELNLRDIVEQKYFPIVGRGWARLTKEKPGELAISWMHIPQLNGQDQQLTLTVGEN
                     GHYTLEGEEFTVNGMVGQRLEKDGVALTIADIKAKPGTQFVLSQPTELEAINALQETF
                     TVSERSKESGMLELTMTGDDPQLITRILNSIANNYLQQNIARQAAQDSQSLEFLQRQL
                     PEVRSELDQAEEKLNVYRQQRDSVDLNLEAKAVLEQIVNVDNQLNELTFREAEISQLY
                     KKDHPTYRALLEKRQTLEQERKRLNKRVSAMPSTQQEVLRLSRDVEAGRAVYLQLLNR
                     QQELSISKSSAIGNVRIIDPAVTQPQPVKPKKALNVVLGFILGLFISVGAVLARAMLR
                     RGVEAPEQLEEHGISVYATIPMSEWLDKRTRLRKKNLFSNQQRHRTKNIPFLAVDNPA
                     DSAVEAVRALRTSLHFAMMETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFI
                     DADLRRGYSHNLFTVSNEHGLSEYLAGKDELNKVIQHFGKGGFDVITRGQVPPNPSEL
                     LMRDRMRQLLEWANDHYDLVIVDTPPMLAVSDAAVVGRSVGTSLLVARFGLNTAKEVS
                     LSMQRLEQAGVNIKGAILNGVIKRASTAYSYGYNYYGYSYSEKE"
     gene            complement(22825..23271)
                     /gene="etp"
                     /locus_tag="JNZ57_001063"
                     /gene_synonym="yccY"
     CDS             complement(22825..23271)
                     /gene="etp"
                     /locus_tag="JNZ57_001063"
                     /gene_synonym="yccY"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-tyrosine-phosphatase Etp"
                     /protein_id="HAY8827361.1"
                     /translation="MAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGL
                     VKHPADATAADVAANHGVSLEGHAGRKLTAEMARNYDLILAMESEHIAQVTAIAPEVR
                     GKTMLFGQWLEQKEIPDPYRKSQDAFEHVYGMLERASQEWAKRLSR"
     gene            complement(23259..24398)
                     /locus_tag="JNZ57_001064"
     CDS             complement(23259..24398)
                     /locus_tag="JNZ57_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HAY8827362.1"
                     /translation="MKKNIFKFSILTLAVLSLTACTLVPGQNLSTSNKDVIELPDNQY
                     DLDKMVNIYPVTPGLIDQLRAKPIMSQANPELEQQIANYEYRIGIGDVLMVTVWDHPE
                     LTTPAGQYRSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQ
                     VDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQN
                     GVKTKVNLYALMQRGDLRQNKLLHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGM
                     TLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIANIYQLNAKDASAMILGTEFQL
                     EPYDIVYVTTAPLARWNRVISLLVPTISGVHDLTETSRWIQTWPN"
     gene            complement(24444..26540)
                     /locus_tag="JNZ57_001065"
     CDS             complement(24444..26540)
                     /locus_tag="JNZ57_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbH domain-containing protein"
                     /protein_id="HAY8827363.1"
                     /translation="MKKNSYLLSCLAIAVSSACHAEVLTYPDPLGSSQSDFGGTGLLQ
                     MPNARIAPEGEFSVNYRDNDQYRFYSTSVALFPWLEGTIRYTDVRTRKYSQWEDFSGD
                     QSYKDKSFDFKLRLWEEGYWLPQVAFGKRDIAGTGLFDGEYLVASKQAGPFDFTLGMA
                     WGYAGNAGNITNPFCRVSDKYCHRAESHDAGDISFSDIFRGPASIFGGIEYQTPWNPL
                     RLKLEYDGNNYQNDFAGKLPQASHFNVGAVYRAASWADLNLSYERGNTLMFGFTLRTN
                     FNDLRPALRDTPKPAYQPAPESEGLQYTTVANQLTALKYNAGFEAPEIQLRDKTLYMS
                     GQQYKYRDSREAVDRANRILVNNLPQGVEKISVTQKREHMAMVTTETDVASLRKQLAG
                     TAPGQSEQLQQQRVEAEDLSAFGRGYRIREDRFSYSFNPTLSQSLGGPEDFYMFQLGL
                     MPSARYWFTDHLLLDGGIFTNIYNNYDKFKSSLLPADSTLPRVRTHIRDYVRNDVYLN
                     NLQANYFADLGNGFYGQVYGGYLETMYAGVGSELLYRPLDASWALGVDVNYVKQRDWD
                     NMMRFTDYSTPTGFVTAYWNPPTLNGVLMKLSVGQYLAKDKGATIDVAKRFDSGVAVG
                     VWAAISNVSKDDYGEGGFSKGFYISIPFDLMTIGPNRNRAVVSWTPLTRDGGQMLSRK
                     YQLYPMTAEREVPVGQ"
     gene            complement(26540..27286)
                     /locus_tag="JNZ57_001066"
     CDS             complement(26540..27286)
                     /locus_tag="JNZ57_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis GfcC family protein"
                     /protein_id="HAY8827364.1"
                     /translation="MNKLQSYFIASVLYVMTPHAFAQGTVTIYLPGEQQTLSVGPMEN
                     VVQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVMAQLASWEAEANDDVAATIKS
                     VRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAG
                     QLPWQAGRSVTDYLQDHPRLAGADKNNVMVITPEGETVVAPVALWNKRHVEPPPGSQL
                     WLGFSAHVLPEKYADLNDQIVSVLTQRVPD"
     gene            complement(27283..27927)
                     /locus_tag="JNZ57_001067"
     CDS             complement(27283..27927)
                     /locus_tag="JNZ57_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbF family lipoprotein"
                     /protein_id="HAY8827365.1"
                     /translation="MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQI
                     QALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLL
                     EVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNV
                     LCNVWQEEVTSTRPEKQWQNTFWVDSATGQVHQSRQMLGAGVIPVEMTFLKPAP"
     gene            complement(28034..28339)
                     /locus_tag="JNZ57_001068"
     CDS             complement(28034..28339)
                     /locus_tag="JNZ57_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine-rich inner membrane protein GfcA"
                     /protein_id="HAY8827366.1"
                     /translation="MKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTG
                     ATTTATTTGGVAAGAVGTATVVGVATAVGVATLAVVAANDSGDGGSHNTSTTTSTTR"
     gene            complement(28781..28993)
                     /gene="cspH"
                     /locus_tag="JNZ57_001069"
     CDS             complement(28781..28993)
                     /gene="cspH"
                     /locus_tag="JNZ57_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock-like protein CspH"
                     /protein_id="HAY8827367.1"
                     /translation="MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEV
                     LIPGLRVEFCRVNGLRGPTAANVYLS"
     gene            29279..29491
                     /gene="cspG"
                     /locus_tag="JNZ57_001070"
     CDS             29279..29491
                     /gene="cspG"
                     /locus_tag="JNZ57_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock protein CspG"
                     /protein_id="HAY8827368.1"
                     /translation="MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRT
                     LNENQKVEFSIEQGQRGPAAANVVTL"
     gene            29502..29690
                     /locus_tag="JNZ57_001071"
     CDS             29502..29690
                     /locus_tag="JNZ57_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HAY8827369.1"
                     /translation="MTQHLHFRCPCCHGSQYRTSAFDVTERNPLGAKCIFCKSTMITF
                     DNVALQIRTDHAPLDFTK"
BASE COUNT         7228 a         7533 c         7789 g         7155 t
ORIGIN      
        1 gaaatcaact gaagctggtg cgtctgtcga aatattctct cgatgcagcg ctgaaagaga
       61 aaagcacgcg caatacccgg gaaagactga aagatttgcc caatatgtct tttcatctgg
      121 aagcgattct cggggaggtg gggattaagg atgtacgggc gttacgtata cttggggcaa
      181 aaatgtgttg gttgcgactg cggcagcaaa acagtctggt gacagaaaag attctgttta
      241 tgcttgaagg tgccattatc ggcattcatg aagctgcgct cccggtggca cgccgccagg
      301 agcttgcaga atgggctgac tcacttacgc cgaaacagga gtttcctgcg gaacttgagt
      361 aatctggcgt tgcagacgac caatctcagg cagtaatgca atcaataatc caacttgttg
      421 tacgaccaga ggttctttgc tgtctgcccg tggttcaagt tgctgcatcc gctgtttcag
      481 gctagctaat gcctcattga cgcgttcttc atcagcaggt tgatgatgta acgcgtcatc
      541 aacatagcaa actgcgtcat caagaaacgc cagaatttca ggattagtta actgctcccg
      601 gtgagcaccg agggctgaga tatagctggt aaacgtatgg ttaaggcaca gcaaccgaaa
      661 cgcggcttcg cgaatttgcg gggtaacgtt cggctcgctg gacatatttg ataccaccga
      721 cgccagctca gcatcacggt tgtgtgcatc gcggcgggca atacgatacg ccagacggtt
      781 atcacgcccc tgatggtatt gctccagtat ggcatcgaga taccgacagt tggcctctgt
      841 ggcgcgttcg agcatgcgcg gcagattgcg aaactgccag tcaggccaga tgtagctcac
      901 tgccgcccac gcaatggcac aaccaatcag cgtatcgatt acgcgaggta acgctacttc
      961 aaaaccttca cccagtaagt taaaacacag tagcaccaaa agtgtgatga acatcgttgc
     1021 atgagcgtat tgcacgttac ggaaggcaaa aaagagcacg ccggtaataa ccagcagcac
     1081 cagctgccct tccagtgatg gcacaaacca cagcacagga atgccaatgg cgatacctac
     1141 cagcgtacca ataatcctta acttcaggcg gtggcgcgtg gcgttatagt ttggctggca
     1201 gacaaacaaa cttgtcagca agatccaaaa cccgtgatgc attccggtta tttgaatgat
     1261 ggcgtagccg aagcacaaca ccagcgacat tcttaccgca tgacggaaga gggcggattc
     1321 cggcgtgaag tgacggctaa gacgcagcca gatatcactc aacccgtgcg ggctgtcatc
     1381 agcgagctca ttttcgtcat tattatgggg tagtgcctgg gcctgttctg attcaattgt
     1441 tgccagttgg gcatcaatgg cgcgtaaatt gttcagcaaa aatcccagtg ttttgagtaa
     1501 atcggcgggt gcgccgttat cgcgcatccg ctccagcgca tcatcaatat gcgtaaaagc
     1561 gcgctcaaaa tgcggatcat gttgataagg ctgacgcaac aaaatacagc gtgacagttg
     1621 ctggcacgcc tggccctgca tcgacatcag ccgctgaaaa cggaacagca cgtcgctgtg
     1681 gcgaaaatgt tcacgcaatg tttgatactg aatatgagaa gagctggcac gctcgtgaat
     1741 atcctgtgcg acaaagtaat aatgcagcgt gcgacgcgtt ccccgttgac cacgatcgcc
     1801 acgtaagcgg gtcagcagcg agagtttcgt ctgattcaat gtcgccatca gcagaccgtt
     1861 ggcgagagcc aaatcgtaca gcggtgcctg gctttcatct tcaatatcag gatcaaacat
     1921 gcgcgacttg agctcaagat aacgcgccag ttgttcatag caacgcgcca ggttgtcctg
     1981 cagcgggcgg accgggaaca gcagatgacc aataagtgtc aggacgttgt accagacggc
     2041 accggccagc agatacatcg gctgctgata ccagtgctca tacagtgatg ttcccaacat
     2101 agtgtaaatg gcgatcagca atgcaccgaa ggcaattgtt gcatagcgtt gacccagacc
     2161 gccgagcaaa atgaagccgc tggtagagag cgttaagcca atcgcaaata gccagggcca
     2221 gggaaacagc aattctactg aggccgaggc gataaaaaag cagaacagcg taatgatgag
     2281 gttacgcaaa cgtcccgcca gtcggtcatc gagatcggtc agcgccgctg ccaccatccc
     2341 cagcgttagc ggaatcgtca gttttacatc acccagccac cacggaaacg ctgtggttcc
     2401 acaaagcgca ataaaaatac gcgcgtaata cagccaggcg ctgttccagg tatagcgttt
     2461 gagcaaagga cttagcataa aggccatatt agtggattat tcaaaacgac gacgtgcatt
     2521 ggcttcacgc gcagcttgcg ctgtttctac cgataccacg cgacgaccaa ccggccatag
     2581 tgcaatagcg gcaattttaa agttcgcaat gccgacagga atgccaatga ttgaaataca
     2641 ttgtgcgatg cccgttgcaa tgtgcatcag gcataaccac cagccaaaga aaatcagcca
     2701 gaaaatattc aataccgtac cgccagtatt cagcagcaca tttttgccag ccgggttcag
     2761 ttcatcgaca tgaatagctt cattgccata aggcaccaga gacagtttag tgatctccca
     2821 gcaggatcgt gtcagcggta aggtaaaaat cagcacaata ctgaccagag tcgccaacag
     2881 ccagcccaga gtggtggcaa atccgccaag cacaaagttc agaatgttca aaacggtacg
     2941 cataaaacct cgctttactg tggttttcag taatgggcgg caattgtaac gttttttggg
     3001 gctggagcac gttttctctg acggttacac tgataagaaa taatttcgtg tggatctaca
     3061 gagtcatgga actgaaagcg acaacgcttg gaaaacgtct ggcacagcac ccttacgatc
     3121 gggcggtgat cctcaatgcc gggattaaag tctccggcga tcgccacgaa taccttattc
     3181 ctttcaatca attactggcg attcactgta agcgtggtct ggtatggggc gagctggaat
     3241 ttgtactgcc ggacgaaaaa gtggtgcgtc tgcacggcac cgaatggggc gagacgcagc
     3301 gtttttacca tcatcttgat gctcactggc ggcggtggag tggcgagatg agcgaaattg
     3361 cgtctggtgt tttacgccag caactggatt tgattgccac gcgcactgga gaaaataaat
     3421 ggctgacgcg tgagcaaacc tctggcgttc agcaacaaat ccgccaggct ttgtcggcgt
     3481 tgccgttgcc ggttaaccga ctggaagaat tcgataactg ccgtgaggcg tggcgtaaat
     3541 gtcaggcctg gttgaaagat attgaaagcg ctcggttgca gcataaccag gcgtataccg
     3601 aagccatgct taccgagtat gcggattttt tccgccaggt cgagtcttca ccgctgaatc
     3661 cggcgcaggc ccgggcagtc gttaatggcg agcattctct gttagtgctg gcaggtgcag
     3721 gaagcggaaa aacgtcggtg ctggtggccc gtgcaggctg gttgctggca cgtggtgaag
     3781 cgtcccctga gcaaatttta ttgctggcgt ttggtcgcaa agccgctgaa gagatggacg
     3841 agcggattcg cgaacggcta cataccgaag acattaccgc acgcacgttt catgcgctgg
     3901 cgctgcatat tattcagcag ggcagcaaaa aagttccgat agtcagcaaa ctggaaaatg
     3961 ataccgctgc ccgtcatgaa ctctttattg ctgagtggcg caagcaatgc agcgaaaaga
     4021 aagcgcaggc gaagggctgg cggcaatggc tgacggaaga aatgcagtgg tcagtgccag
     4081 aaggtaactt ctgggatgat gaaaaattac agcgtcgcct tgcctctcgc ctcgatcgct
     4141 gggtaagtct gatgcggatg cacggtggtg cacaggcaga aatgattgcc agtgcacccg
     4201 aagagattcg cgatctgttc agtaaacgta tcaagttgat ggccccgtta ttaaaagcct
     4261 ggaaaggtgc gctgaaggca gaaaacgctg tcgatttttc gggccttatt catcaggcga
     4321 ttgtgattct ggagaaaggt cgctttatca gcccgtggaa gcatattctg gttgatgaat
     4381 ttcaggatat ctcgccgcag cgggcagcgt tgttagcggc attacgcaag caaaacagtc
     4441 agacgacgtt gttcgctgtt ggtgatgact ggcaggcgat ttaccgattc agcggtgcgc
     4501 aaatgtcgct caccaccgct ttccatgaaa actttggtga aggcgaacgt tgtgatttag
     4561 acacgactta ccgttttaac agtcgtatcg gtaaggtggc aaaccgtttt attcagcaga
     4621 acccaggcca gctgaaaaag ccgctaaaca gcttaaccaa tggagacaaa aaagccgtca
     4681 cgttattgga tgagagtcaa cttgacgctt tgctggataa gctctctggt tatgccaaac
     4741 cggaagagcg cattctgatc ctggcgcgtt accatcacat gaggcctgcc agcctggaaa
     4801 aagcggcaac acgctggccg aagttgcaaa tcgactttat gaccattcat gccagcaaag
     4861 ggcaacaggc tgattacgtc atcatcgttg gcttgcagga gggaagtgat ggttttccgg
     4921 ctgcggcgcg ggagtcgatt atggaagagg cgctactgcc accggttgag gatttcccgg
     4981 acgctgaaga acggcggtta atgtacgtgg cgctgacccg ggcacgccat cgggtatggg
     5041 cactgtttaa caaagagaat ccctctccct ttgttgaaat actgaaaaat ctggatgtgc
     5101 cggtggcgag aaaaccgtaa gaaacaggtg gcgtttgcca cctgtgcaat attacttcag
     5161 acggtccgcg agataacgct gataatcggg gatcagaata tcgaccgcgt cgttgaaatg
     5221 cggcgactgg attatgaagt ctgccgttgc cacgttggtg gcgaccggaa tgttccatac
     5281 cgtcgccaga cgcagcaagg ctttcacgtc aggatcgtgc ggcacggcat ttagtggatc
     5341 ccagaagaaa atcaatacat caattttccc ttctgagatc aatgcgccaa cctgctggtc
     5401 accccccatt gggccactca acatcgcgtt gacgttcatg ccggtcgcgc gggaaattaa
     5461 gttaccggta gtgcctgttg catacagtac gtgttgttcc agtaacggtt gatgccgttc
     5521 cacccagctc atcagcattt gtttgcagtg atcgtgtgcc accagcgcaa tatgtttccg
     5581 cgcaggtaaa gtgcgagtcg tcagttccat aatgtacatc cgtagtcaac tttcctacag
     5641 attactgtaa gcacttatcg ctgcaagata aagaccgaaa aagcctgcgc acaggcacaa
     5701 aaatctcagg aagatggttg tttttccgcc cactgcagga aagtatttcg cgtttgtggg
     5761 tcagccagtt taaaccaata cttcagccgt tgttctgtga gcacctgaga ctgcggtgga
     5821 atagcatcca gctcggaaac acccgaaagc agcgtactgt catctgccat catcgtggca
     5881 aattgcggta gtgaagcgcg tttcgcggat ttgttatagc gttcaacctc gacctcataa
     5941 tcaatcgttt ttgccgttga ggtaatggcg agaatatcca gctttaccgg aatcggcgtc
     6001 gcatcgccat ccaacaattc aaggcgcggc gcggcatcaa aatggttagc ttcccgctca
     6061 ttctccaggc gaggcaggcg aaaattgacc tggttgatga gctgggtatt aaaactgacc
     6121 accagcggtg gggagatata cagccgttct tcactattgg aaagatgaat cgtcttctca
     6181 acgcgaaaca ctaactgatg cggtccatta tccagttcaa tgctgtccgc accgcgtagc
     6241 agagagctgg aaaccttctt gccgtcgagt accagaagat cgacatcggt tgaaagccgc
     6301 agcgtggtgg caaaaacgga taccggcaaa cataatgcaa tcaaggtggt cacgatgccg
     6361 gttttcatag gtagctcctg tcaaaagacc gcccgaataa taatgtgtca aaatttttct
     6421 ttaatcatac ttactaacat atagacatat ttcccgcttt tgctctcatt cattcgtatt
     6481 agctgcatgg ttggcatgtc ggctttgtcg tacactttgt taaacagtct ggaggaaata
     6541 atgaaagaaa ccgatattgc aggcatttta acgtccactc acaccattgc gctggtgggg
     6601 gcaagcgaca aacccgatcg tcccagctat cgcgtgatga aatatctact cgaccagggg
     6661 tatcatgtca ttccggtttc gccaaaagtt gccggcaaaa cgctgctggg ccagcagggg
     6721 tatggcacgc tggcagacgt tccggaaaag gtcgatatgg tcgatgtttt ccgtaattca
     6781 gaagcggcgt ggggcgtggc acaggaagct attgccattg gcgcgaaaac cctctggatg
     6841 caactggggg tgattaatga gcaagcggca gtactggcac gggatgccgg gttgaatgtg
     6901 gtgatggatc gctgcccggc tattgagatc cctcgcctgg gcctggccaa ataaaaaatc
     6961 cccggaaggc aaaaaccttc cggggattcg ttcagggatc agttacgcag acgcggggcc
     7021 tggagttgtt tgcggatggt ctgcgccagc tcatccatgg atggctgttc aggatgttca
     7081 tcctgcaatt cgctacttag ctgggcttca gctaggtagg tatgaaccgg taggccgtta
     7141 tcgtcctcca tcactacgtg ataccacgga gcggcgcgaa gctcgtcatt taccgccagc
     7201 tcatcaggcg acggttcaga gagcgaataa accgggtcga tatccacgac cactccgaga
     7261 taacctaaca gggaatggcg gacctgctgg ccgataccga atttgctggc aatcatagtc
     7321 acctcccggg aaatctttac ctttgatata agggtaaaat tccacatttc aagttacatg
     7381 acgcgacagg caaacccttt cagatatagc ccttccggat aggtagcgat caccggatga
     7441 tcggctgcct gacggaactg ctctataaat tgtacatcac ggccggcatc aattgcggca
     7501 tccgcgatga ttttctgaaa taaatcgctg gtcatcagac cggaacagga gaaagtcagg
     7561 agaataccgc cttcattcag caactgaatc gccagcatgt tgatatcttt atagccacga
     7621 cacgcgccca tcaactggct tttattctca acaaacttcg gcgggtccat cacgataacg
     7681 tcaaattttt caccgcgatc gcgataagta cgcagcaatt taaagacatc atcacggaca
     7741 aactcagcct tgctcagatc cagtttgttc agctcaacgt tctgccgtgc aatatccagc
     7801 gcttcctggg aggtatcaac gctgacaacc tggctgcaac cgcccatcag tgccgatacg
     7861 gcgaaaccac cggtatagga gaaacagttc agcacacgtt tattttcaac gtagcggcgg
     7921 gtagccaggc ggctgtctcg ctggtccagg tagtagcccg ttttgtgccc gtgctgaata
     7981 tccaccagca gcttcatgcc gtgttcttca atcggcagca gggcaggcgg caactcgccg
     8041 gtgacgaggc ccagggtcag ctccatccct tcttttttac gtaccgcaac atcgctgcga
     8101 tcgtaaatcg cacattccgg gtacagcgtt tgcagggcac taactaatgc cgcgcgctga
     8161 tattctgccc cagcactcag cagttgcagc accagaaaat taccgaaacg atcgatagta
     8221 atacccggca ggccatcaga ttctccggcg attaaacgat agctgtcgag gccatctttt
     8281 tgcgccagcc agtcacgcca tttttgtgct tgttgcaaac ggcgggaaaa aaaagcaatg
     8341 tcgatagact cagacgggtc aaacgtccag acgcgcgccc ggatttgcga agctggcgaa
     8401 taagcgccgc gtgctaacca ttttccctga tgatcaacaa tatcgatggt ttcaccgagg
     8461 ctggctttac cttccatgcg ggcaacggtc ccggaaaaga cccacggatg gcgacgaagt
     8521 aatgattttt cgcgcccttt ggctaacact aaacgtacac tcataattta cttttctgtc
     8581 gatgcaaaga aatgggcgtc attgtccgga gttttccatg gatttgcaac gcgtccatta
     8641 aggataagga gagcagcaat gtcgaaagtc tgcataattg cctgggttta cgggcgagtt
     8701 cagggcgtag gatttcgcta caccacacag tacgaagcga aaagactggg tttaaccggg
     8761 tacgccaaaa atcttgacga tggcagcgtg gaagtggttg cctgcggtga agaagggcag
     8821 gtggaaaaat taatgcagtg gttaaagagt ggcagcccgc gttctgcgcg tgtagaacgg
     8881 gtgctcagcg agccgcatca tccctcgggg gaattaaccg attttcgtat ccgttaaata
     8941 cattttaccg gttttggcag gccagcaatt ttggtggctt gcttagccgg acctttcgga
     9001 aacagtcggt ataaatagcg gctgttacct ttttcttcgc caaatttatt cgccatcgct
     9061 tttaccagca tacgaatcgc cggagaagta ttgaattcca gatagaaatc acgcacaaaa
     9121 cgcaccactt cccagtgttc cggtgacagc gaaatccctt cgttctctgc aatcaccact
     9181 gccagcggct cactccactg gctgctttct ttgagatagc cttcggtatc cgtttctatc
     9241 tctttacctt cgaagatcag cataattatt actaccttaa tcagactggc ggcagtgtaa
     9301 caaaaaacaa agccccgcat aaagcgaggc tatgaaagtg ttagcgggtg agattaatcg
     9361 cggctggcga agcccagaat gctcagcagg ctgacgaaga tgttgtacag cgaaacatac
     9421 aggctaaccg tggcacgaat atagttcgtt tcaccgccat gaacgatgtt gctggtttca
     9481 aacaaaatag cgccagagga gatcaaaatg aagaccgcgc tgatcgccag atgcagagca
     9541 ggcagctgca ggaagatatt agcaaccata ccaatcagca ccaccacaat acccgccatc
     9601 agcataccgc cgaggaacga catatctttg cgggtggtca gcacatatgc agagcagcag
     9661 aagaacacta acgccgttcc gcccagtgcc atagcgatta cgtcacccat tccggcagac
     9721 agataggtgt tcagaatagg tccgaggata taacccagaa aaccggtaaa ggcgaatgcg
     9781 gagataatcc cggtcggctt attcgccgtt ttataggtca ggaacatcaa accatacata
     9841 cccaccagcg tcagaatcag acccggagat ggcagcatca gcaccgtact ggcagttgcg
     9901 gtaatcgccg aaaaggccag cgtcaggctc agcagaaaat aggtattacg cagcacctta
     9961 tgggtgctaa gcagtgatgt acggtcatgt gaagaactaa caatacgatc cattgagtca
    10021 ctctctatga cagatgtaat taattaagca gcataatgat aatgcgtaag ggcacccaga
    10081 agttttaccc atctttacgc atttgatctg gaacaggttt aacagcggat tatcaggtca
    10141 ttaagcaaat ataacgccct gagaatttcg acaggcaaaa gaaaaagggg ttagcattta
    10201 gctaacccct tatcttattt ggcggaagcg cagagattcg aactctggaa ccctttcggg
    10261 tcgccggttt tcaagaccgg tgccttcaac cgctcggcca cacttccgga ataacgcgca
    10321 ctataaacat cccgatgcgg cgtgtaaacc cctaatttgt ttgtttgcct gaaaaacagc
    10381 caaaagtgca ttgatagcgt gaaataacag cagattgatc atttcatcac catgaattcc
    10441 ttctctttta ctcgtttagc aaccggctaa acatccccac cgcccggcaa aaagaaaaat
    10501 aggtccattt ttatcgctaa aagataaatc cacacagttt gtattgtttt gtgcaaaagt
    10561 ttcactacgc tttattaaca atactttctg gcgacgtgcg ccagtgcaga aggatgagct
    10621 ttcgttttca gcatctcacg tgaagcgatg gtttgccttg ctacagggac gtcgcttgcc
    10681 gaccataagc gcccggtgtc ctgccggtgt cgcaaggaga agagacgtgc gatatgaata
    10741 acgaggaaac attttaccag gccatgcggc gtcagggcgt tacccggcgc agctttctca
    10801 aatattgtag tctggctgcc acgtcgctgg gattaggcgc gggaatggca ccaaagattg
    10861 cctgggcgct ggagaacaaa ccccgcattc cggtggtatg gatccacggt ctggaatgca
    10921 cctgctgtac cgaatctttt atccgctccg ctcacccact ggcgaaggac gtcatccttt
    10981 ccctgatttc cctcgattat gacgatactt tgatggctgc cgccggaacc caggcggaag
    11041 aagtcttcga agacatcatc acgcaataca atggcaaata tatcctcgca gtagaaggta
    11101 atccgccgct gggcgagcag gggatgttct gtatcagcag cggtcgaccg tttattgaga
    11161 aactcaaacg tgccgctgcc ggagccagcg cgattatcgc ctggggaacc tgcgcgtcct
    11221 ggggctgcgt gcaggccgcg cggcccaatc cgacgcaggc aacgcctatc gacaaagtca
    11281 tcaccgacaa acccattatc aaagtacctg gctgcccgcc gatcccggat gtgatgagcg
    11341 ccatcattac ttacatggtg acctttgatc gcttgccaga tgtcgacaga atgggccgtc
    11401 cgctgatgtt ctatggtcag cgaatccacg ataaatgcta tcgccgcgcc cacttcgacg
    11461 ccggagagtt cgtccagagt tgggatgatg acgctgcccg caaaggttac tgcctgtaca
    11521 aaatgggctg caaagggcct accacctata acgcctgttc ctccacacgc tggaatgatg
    11581 gcgtttcttt cccaatccag tctggtcacg gctgcctggg ctgtgcggaa aatggtttct
    11641 gggatcgcgg ttcgttctac agccgcgtgg tcgatattcc gcaaatgggt actcattcca
    11701 ccgccgatac cgtcggttta accgcgcttg gcgtggtggc agcggctgtt ggtgtgcacg
    11761 cagtcgccag cgccgttgac cagcgcagac gtcataacca gcaacctaca gaaaccgaac
    11821 atcagccagg caatgaggat aaacaggcat gagcactcag tacgaaactc agggatacac
    11881 catcaataat gccggacgcc gcctggtggt cgacccgatt acgcgcatcg aaggccacat
    11941 gcgctgcgaa gtgaatatta acgatcagaa tgtgatcacc aatgccgtct cctgcggcac
    12001 catgtttcgc gggctggaga tcatcctaca agggcgcgac ccgcgcgatg cgtgggcgtt
    12061 cgttgaacgt atctgcggcg tctgtactgg cgtacacgcc ctggcttcgg tttacgccat
    12121 cgaagatgct atcggtatta aagtgccgga caacgccaat atcatccgca acattatgct
    12181 ggcaacgctc tggtgccacg atcatctggt gcacttctat cagcttgccg ggatggactg
    12241 gatcgatgtg ttagatgcgc tgaaagccga cccgcggaaa acctccgaac tggcgcaaag
    12301 tctctcctct tggccgaaat catcccctgg ctatttcttc gacgtacaaa accgcctgaa
    12361 aaaatttgtt gaaggcgggc agttggggat cttccgcaat ggctactggg ggcacccgca
    12421 gtacaaactg ccgccagaag ctaacctgat gggctttgcc cactatctcg aagctctcga
    12481 tttccagcgt gaaattgtca aaatccacgc ggtctttggc ggtaaaaacc cgcatccaaa
    12541 ctggattgtc ggcgggatgc cttgcgccat caacattgac gaaagcggcg cggtcggggc
    12601 agtcaatatg gaacgcctga acctggtgca gtcaattatc acccgcacgg cggacttcat
    12661 taacaacgtg atgatccccg acgccttagc catcggtcag ttcaacaaac cgtggagcga
    12721 aatcggcact ggtctttctg ataaatgcgt tctcagctac ggcgcattcc cggatattgc
    12781 caacgacttt ggcgagaaaa gtctgctgat gcttggcggc gcggtgatta acggcgactt
    12841 caacaatgtg ctgccagtgg atttggttga tccgcagcag gtgcaggagt ttgtcgacca
    12901 cgcctggtat cgatatccca acgatcaggt cgggcgtcat ccgttcgatg gcatcaccga
    12961 cccgtggtac aaccccggcg atgtcaaagg cagcgatacc aacattcagc agctgaatga
    13021 acaggaacgc tactcgtgga tcaaagcgcc acgctggcgc ggtaacgcga tggaagtggg
    13081 gccgctggcg cgcacgttaa tcgcttatca caaaggcgat gctgcgaccg ttgagtcggt
    13141 cgatcgcatg atgtcggcgt tgaacctgcc gctttccggt atccagtcaa cgttaggccg
    13201 cattttgtgc cgcgcgcacg aagcgcagtg ggccgcaggt aagttgcagt atttcttcga
    13261 caagctgatg accaacctga aaaacggcaa tctcgccact gcttccacgg aaaaatggga
    13321 acctgcaacc tggccgacag agtgccgtgg tgtcggtttt accgaagcgc cgcgcggggc
    13381 gttaggccac tgggccgcca ttcgcgatgg caagattgat ctctaccagt gcgtggtgcc
    13441 gaccacctgg aacgccagcc cgcgcgatcc caaagggcag attggcgctt atgaagcggc
    13501 gctgatgaac accaaaatgg cgatccccga gcaaccgctg gagatcctgc gtactctgca
    13561 cagctttgac ccgtgcctcg cctgttcaac acacgtgctg ggcgacgacg gtagcgagct
    13621 gatctccgtg caggtgcgtt aacagcgaag gagaatcatc atgcaacaga aaagcgacaa
    13681 cgttgtcagc cactatgtct ttgaagcgcc agtccgcatc tggcactggt tgacggtgtt
    13741 atgcatggcg gtgttgatgg tcaccggata ctttatcggc aagccgctac cttccgtcag
    13801 cggcgaggcg acgtatctgt tctatatggg ctacatcagg ttaattcact tcagcgccgg
    13861 gatggttttt accgtggttt tgctgatgcg gatctactgg gcttttgttg gcaatcgata
    13921 ctcccgcgag ctgtttatcg tgccggtatg gcgtaaaagc tggtggcagg gcgtgtggta
    13981 tgaaatccgc tggtatctgt ttctggcaaa acgtccgagt gccaatatag gccataatcc
    14041 catcgcccag gcggcgatgt tcggctattt cctgatgtcg gtctttatga tcatcactgg
    14101 ttttgcgctg tacagcgaac acagccagta cgctattttt gcgccgttcc gttatgtggt
    14161 ggaatttttc tactggacgg gtggcaactc aatggacatt cacagctggc atcggctggg
    14221 gatgtggctg attggcgcgt ttgtgatcgg tcatgtctac atggcgctgc gtgaagacat
    14281 catgtccgac gacacggtga tctccaccat ggtcaacggc taccgtagcc acaaatttgg
    14341 caaaataagt aacaaggagt gttcatgagc gagcaacgcg tggtggtcat ggggctgggc
    14401 aacctgctgt gggccgatga aggcttcggc gtgcgggtgg cggaacggct gtatgcccat
    14461 taccactggc ccgagtatgt ggagattgtc gatggcggta ctcagggact gaacttgctg
    14521 gggtatgtcg aaagcgccag ccatctgttg attctcgatg ccattgacta cgggctggaa
    14581 cctggaacgc tgcgaaccta tgccggagaa cgcattccgg cttatctcag cgcgaagaaa
    14641 atgagcctgc atcagaacag tttctccgaa gtgctggcgc tggcagatat ccgcggacat
    14701 ctgccagcac atattgccct cgtcgggctg caacccgcga tgctcgacga ctacggcggc
    14761 agtctgagcg aactggcacg ggagcaactg ctcgctgcgg aacaatcggc tctggcgcag
    14821 ttggctgcgt ggggaagtgt gccgcaaccg gctaatgaat cgcgttgtct caattatgac
    14881 tgtctgtcga tggaaaatta cgaaggcgtt cgcttgcgcc agtaccggat gacacaggag
    14941 gagcagggat gagcaacgac acgccatttg atgcgttgtg gcaacgaatg ctggcgcgcg
    15001 gctggacgcc ggtcagtgaa tcccgtcttg acgactggct tacgcaagcg ccagacggcg
    15061 tggtgttatt aagcagtgac ccgaaacgca cgccagaggt cagcgataat ccggtaatga
    15121 ttggcgaatt actgcacgag tttcccgact atacatggca ggtggcgatt gctgaccttg
    15181 agcagagcga agccatcggc gatcgctttg gcgtctttcg ctttcctacc actttagtgt
    15241 ttaccggcgg aaactatcgc ggcgtgctga atggtattca cccgtgggcg gaactgataa
    15301 acctgatgcg cgggcttgtc gaaccgcagc aggagcgtgc ctcatgagcg aaactttttt
    15361 ccatctgctg gggccaggaa cgcaaccgaa cgatgacagt ttcagcatga atccactgcc
    15421 gatcacctgt caggtgaatg atgaaccgag tatggcggcc ctggagcaat gtgctcacag
    15481 cccgcaggtg attgcgctgt taaacgagtt acaacatcaa ctaagcgaac gccagccgcc
    15541 gttgggcgag gtgctggcag tcgatctgtt aaatctcaac gccgacgatc gtcactttat
    15601 caatacgctt ctcggggaag gggaagtgtc agtgcgcatt cagcaggctg acgacagtaa
    15661 aagtgaaata caggaggcga tcttctgcgg attatggcgg gtgcgcagac gtcgcggcga
    15721 aaagttgctg gaggacaaac tggaggctgg ctgcgcgccg ctggcgttgt ggcaggcggc
    15781 aacgcaaaat ctcttgccga cagattcgct gttaccgccg cccattgatg gcctgatgaa
    15841 tggcctaccg ttggcgcatg agttactggc acatgtacgt aaccccgacg cgcagccgca
    15901 cagcattaat ctgacgcaat tacccatcag cgaggctgat cggctttttc tctcacgtct
    15961 ctgtgggccg ggaaatattc agattcgtac cattggctat ggcgagagct atatcaacgc
    16021 cacggggtta cgccatgtct ggcatttacg ctgtacggac accttaaaag gcccgttact
    16081 ggaaagttat gaaatctgcc caataccgga agtggtgctg gcagcgccag aagatttggt
    16141 cgactctgcg cagcggctta gcgaggtatg tcagtggctg gcggaagctg caccgacgta
    16201 aaaagacggt aagtatcgct ttcagtctta tgaatatcgc aatcggcgaa tacctctggt
    16261 cgtagagttt caggataaag agggagatct aacattatcg ggttattttt ctctcttcgc
    16321 ctacaggagt gcgcatgtgg gatgtcattg atttatcgcg ctggcagttt gctctgaccg
    16381 cgctgtatca ctttttattt gtacccctta ccctggggct gatttttttg ctggctatca
    16441 tggaaaccat ttacgtggtc accggcaaaa caatctaccg cgatatgacg cgcttctggg
    16501 gtaagctctt cggtatcaat tttgctcttg gcgtggctac cggcctgacc atggagtttc
    16561 agtttggtac taactgggca ttctattcca actatgtggg cgatattttt ggcgcaccgc
    16621 tggcgatgga agcattaatg gccttcttcc tcgaatccac ctttgtcggg cttttcttct
    16681 tcggctggca gcggctgaat aaataccagc acctgctggt gacgtggctg gtggcgttcg
    16741 gttcaaatct ctctgcattg tggatattga atgccaacgg ttggatgcaa tacccgaccg
    16801 gtgcgcattt tgatatcgac accctacgta tggagatgac cagcttcagc gagctggtct
    16861 ttaacccggt cagccaggtg aaatttgtgc acaccgtaat ggcgggctac gtgaccgggg
    16921 ccatgtttat tatggcgatc agcgcctggt atttactgcg cggacgggag cgcgatgttg
    16981 cattacgctc gtttgccatc ggttccgtct tcggtactct ggcgattatc ggcacgctac
    17041 aactcggaga cagttctgcg tatgaagtcg cgcaagtaca accggtaaaa ctggcggcga
    17101 tggaagggga gtggcaaacg gaacctgctc ctgcaccgtt ccatgtggtt gcctggccgg
    17161 aacaggatca agagcgtaac gcctttgcca tcaaaattcc cgcgctgtta gggatcctcg
    17221 ccactcactc attagataaa cccgtgccgg gtctgaagaa tttgatggct gaaacctacc
    17281 cacgtttgca acgcggacgt atggcctggc tgttaatgca ggaaatatcg caaggcaatc
    17341 gtgagccgca tgtgttgcag gcattccggg aactggaagg tgacctgggc tacggcatgt
    17401 tgctctcccg ctatgcgccg gatatgaatc atgtcacagc cgcacagtac caggcggcga
    17461 tgcgtggcgc gatacctcag gttgcgccgg tattctggag tttccgcatc atggtgggct
    17521 gtggttccct gctgctactg gtgatgctga ttgcgcttgt ccagacgctg cgtggcaaaa
    17581 tcgaccagca tcgctgggtg ctgaaaatgg cgctctggag tttgccgttg ccgtggattg
    17641 cgattgaagc cgggtggttt atgaccgagt ttggtcgtca gccgtgggcg atacaggaca
    17701 tcttaccgac atactccgcg cactccgctt taaccacagg acaactggct ttctcactga
    17761 tcatgatcgt agggctttac accctgttct taatcgccga agtctacctg atgcagaaat
    17821 atgcccgtct ggggccgagc gcgatgcaga gtgaacaacc gacgcagcaa caggggtaaa
    17881 ggagaaaatc atgtttgatt atgaaacatt gcgcttcatc tggtggctgc tgattggcgt
    17941 gatcctggtg gtctttatga tctccgacgg atttgacatg gggatcggct gtctgctgcc
    18001 gctggtggcg cgtaatgatg atgaacgccg gatagtgata aacagcgttg gtgcacactg
    18061 ggaaggcaac caggtctggt tgatcctcgc tggtggggca ttatttgccg cctggcccag
    18121 agtgtatgca gcggcgtttt ccggctttta tgtggcgatg atcctggtgc tgtgctcact
    18181 gttcttccgc ccgctggcct ttgattatcg cggaaaaatc gccgatgcac gctggcgtaa
    18241 aatgtgggac gccggtctgg tcatcggcag tctggtgccg ccggtagtct tcggtatcgc
    18301 cttcggcaac ttgttgctcg gcgtgccgtt tgccttcaca ccgcaattac gcgtggagta
    18361 tctcggcagc ttctggcaac tgctgacgcc attcccttta ttgtgcggat tgctcagcct
    18421 tgggatggtg attttgcaag gtggcgtctg gttacaactg aaaactgttg gtgtgattca
    18481 tctgcgttca cagctggcca ccaaacgcgc tgcactgttg gtgatgctgt gctttttgct
    18541 ggcgggttac tggctgtggg tcggtattga tggctttgta ctgctcgccc aggatgctaa
    18601 cggtccttcc aatccgttaa tgaaactggt ggcagtgcta cctggtgcct ggatgaataa
    18661 tttcgtcgaa tcgcccgttt tgtggatctt cccgctgctg gggttcttct gcccattgct
    18721 gacggtgatg gcgatttatc gtggtcgccc aggttgggga tttttaatgg cgtcattgat
    18781 gcaatttggc gtgattttca cggcaggcat cacgctgttc cccttcgtca tgccgtcaag
    18841 cgtgagtccg atctccagcc tgacgttgtg ggacagctct tccagccagc tgacgctgag
    18901 cattatgttg gtaatcgtgc tgatattttt gcccattgtg ttgctctaca ctctctggag
    18961 ctactacaaa atgtgggggc gcatgacaac agaaactctc cgccgtaacg aaaacgagtt
    19021 gtactaagga gcaggaacaa tgtggtattt actttggttc gtcggcattt tgttgatgtg
    19081 ttcgctctcc acccttgtgt tggtatggct ggacccgcgt ctgaaaagtt aacgaacgta
    19141 ggcctgatgc ggcgcattag catcgcatca ggcaatcaat aatgtcagat atgaaaagcg
    19201 gaaacatatc gatgaaagcg atcttaatcc catttttatc tcttctgatt ccgttaacct
    19261 cgcaatctgc attcgctcag agtgagccgg agctgaagct ggaaagtgtg gtgattgtca
    19321 gtcgtcatgg tgtgcgtgct ccaaccaagg ccacgcaact gatgcaggat gtcaccccag
    19381 acgcatggcc aacctggccg gtaaaactgg gttggctgac accgcgcggt ggtgagctaa
    19441 tcgcctattt cggacattac caacgccagc gtctggtggc cgacggattg ctggcaaaaa
    19501 agggctgtcc gcagcctggt caggtcgcga ttattgctga tgtcgacgag cgtacccgta
    19561 aaacaggcga agccttcgcc gccgggctgg cacctgactg tgcaataacc gtacataccc
    19621 aggcagatac gtccagtccc gatccgttat ttaatcctct aaaaactggc gtttgccaac
    19681 tggataatgc gaacgtgact gacgcgatcc tcagcaaggc aggagggtca attgctgact
    19741 ttaccgggca tcggcaaacg gcgtttcgcg aactggaacg ggtgcttaat tttccgcaat
    19801 caaacttgtg ccttaaacgt gagaaacagg acgaaagctg ttcattaacg caggcattac
    19861 catcggaact caaggtgagc gccgacaatg tctcattaac cggtgcggta agcctcgcat
    19921 caatgctgac ggagatattt ctcctgcaac aagcacaggg aatgccagag ccggggtggg
    19981 gaaggatcac cgattcacac cagtggaaca ccttgctaag tttgcataac gcgcaatttt
    20041 atttgctaca acgcacgcca gaggttgccc gcagccgcgc caccccgtta ttggatttga
    20101 tcatggcagc gttgacgccc catccaccgc aaaaacaggc gtatggtgtg acattaccca
    20161 cttcagtact gtttattgcc ggacacgata ctaatctggc aaatctcggc ggcgcactgg
    20221 agctcaactg gacgcttccc ggtcagccgg ataacacgcc gccaggtggt gaactggtgt
    20281 ttgaacgctg gcgtcggcta agcgataaca gccagtggat tcaggtttcg ctggtcttcc
    20341 agactttaca gcagatgcgt gataaaacgc cgctgtcatt aaatacgccg cccggagagg
    20401 tgaaactgac cctggcagga tgtgaagagc gaaatgcgca gggcatgtgt tcgttggcag
    20461 gttttacgca aatcgtgaat gaagcacgca taccggcgtg cagtttgtaa tgcataaaaa
    20521 agagcattca gttacctgaa tgctctgagg ctgatgacaa acgaagaact gtctaatgcg
    20581 tagaccggaa aaggcgttca cgccgcatcc ggccactttc agttttactc tttctcggag
    20641 taactataac cgtaatagtt atagccgtaa ctgtaagcgg tgctggcgcg tttaatcaca
    20701 ccattgagga tagcgccttt aatattgacg cctgcctgtt ccagacgctg cattgacaaa
    20761 ctcacctctt tggcggtgtt caagccaaaa cgcgcaacca gcaggctggt gccaacagaa
    20821 cgccccacga ccgcggcatc actcaccgcc agcatcggcg gcgtatcgac aatcaccaga
    20881 tcgtaatggt cgttcgccca ttccagtaat tgacgcatcc gatcgcgcat cagcagttca
    20941 gacgggttag gtggcacctg accgcgagta atcacatcaa agcctccttt gccaaaatgc
    21001 tggatcactt tgttgagctc atctttacct gccagatatt ccgacaagcc atgttcatta
    21061 ctcacggtaa acaggttatg cgaataacca cggcgtaagt cggcatcaat aaataacact
    21121 ttttgatcgg actgggcgat caccgctgcc agagttgaac tgacaaacgt tttaccactg
    21181 tctggcgtcg caccggtgat catcagaatg ttattctccg tctccatcat agcgaagtgc
    21241 agactggttc gtagcgcacg tacggcttcc acagcagaat ccgccgggtt atccaccgcc
    21301 aggaagggga tatttttagt acgatggcgc tgctgattag aaaataaatt tttcttacgc
    21361 agacgggtac gtttatccag ccactcggac attgggatag tggcataaac gctgatgccg
    21421 tgctcttcca gttgttccgg ggcttctaca ccacgacgca acatcgcacg cgccagcacg
    21481 gcacccaccg aaataaacag gccaagaata aaaccaagca ccacgttcaa cgcttttttc
    21541 ggtttcactg gctgcggctg agtgactgcc gggtcgataa tccgcacgtt accaatggca
    21601 ctggatttcg aaatactcaa ctcctgctgg cggttaagta attgcagata taccgcacgg
    21661 cccgcttcta cgtcacggct taaacgtaac acttcctgtt gagtggaagg cattgccgat
    21721 acccgcttat tcaggcgttt gcgttcttgc tccagcgtct ggcgtttttc cagcagcgca
    21781 cgataagttg ggtgatcttt cttatacagc tgggagatct ctgcctcgcg gaaagtcagc
    21841 tcattgagtt gattatcaac gttcacaatc tgctcaagaa cggctttggc ttctaggtta
    21901 aggtcaaccg aatcgcgctg ctggcgataa acgttgagtt tttcttccgc ctggtccagc
    21961 tcgctgcgca cttcaggcaa ctggcgctgt aagaattcaa ggctttgtga atcctgcgcc
    22021 gcctggcgag cgatattctg ttgcaaatag ttgttagcga tgctgttcag aatacgagta
    22081 atcaactggg gatcatcacc agtcatggta agttccagca tcccgctttc tttactgcgt
    22141 tcgctaacgg taaaggtttc ctgcaatgcg ttaatcgctt ccagttcggt aggctggctc
    22201 aggacaaact gtgttcctgg tttggcctta atgtccgcga tagtcagcgc aacgccatct
    22261 ttttccagac gctggccgac cataccattg acggtgaact cttcaccttc cagtgtatag
    22321 tggccgtttt ccccaaccgt gagtgtcagt tgctgatcct gaccattcag ttgtggaata
    22381 tgcatccagc tgatcgccag ctcacctggt ttttctttgg ttaatctcgc ccagccgcga
    22441 cccacaatcg gaaaatactt ctgctcaact atgtcgcgca gattcagttc agcaatggtt
    22501 ttaccgagaa tcatgcgcga ttgcagcagt tgaatctccg gtgcagactc gggcgatgag
    22561 ttagggatca tatcgctcag gccgctgaga atggcgttgc cctgtttttg ctcaacctgg
    22621 accagagtat ctgcctgata aattggtgtg cttaacagcg agtaagcgac agcgatcagc
    22681 gtgaataacg cggtcacgct gataataaac ttacggtgat cccataactc gccgaccaga
    22741 cgaagcagat cgatctcatt ttcctgagta ctgcctggtg gcgtattcat atttttagtt
    22801 gtcatcgtat tttataaact caaattaccg gctgaggcgc ttcgcccatt cctgactggc
    22861 gcgctccaac ataccgtaga catgttcaaa tgcgtcctga cttttacgat agggatccgg
    22921 gatctctttc tgttccagcc attgcccaaa cagcattgtc ttcccgcgga cctcgggagc
    22981 gattgcggta acctgagcaa tatgctctga ctccattgcc agaatcagat cgtaatttcg
    23041 tgccatctca gcagtgagct tacgtccggc atgtccttca agagatacgc catgattagc
    23101 ggcaacatct gctgctgtcg catctgcagg gtgttttacc agaccatgaa cacctgccga
    23161 tttgactttt acgcctggca gacgtttacg cagcaagcgc tcgccaatgg gcgaacggca
    23221 aatgttgccg gtacaaacca ccaggattga gttaaatttt agttgggcca tgtttgaatc
    23281 caccgtgaag tctctgtcag gtcatgcacc ccggaaatcg tcggtaccag cagagaaatc
    23341 acacggttcc aacgagccag cggcgcggta gtgacataaa caatgtcgta aggttcaagc
    23401 tggaattccg ttccgagtat cattgccgat gcgtccttcg cattcagctg ataaatattg
    23461 gcgattttgc cattctgctt gttttgcgtt gcacgaataa caaaaatccc cgtcgcatca
    23521 gcgacatcct gattcatacc ctcagcgtta cccagcgctt ccgccagggt cataccgctg
    23581 cggtccattt tcagcgtgct ctgtttaccc acttcaccca tcacgaagac tttcagatca
    23641 tcgttgcgcg gaataaataa aatatcgccc gggtgcagca gtttgttctg gcgcaagtcg
    23701 ccacgctgca tcagcgcata gaggttcact ttggtcttta cgccattctg ggtgagcacc
    23761 acgttgcgcc agtctgcatc tgcggtcaga ccgcccgcgg cgttaatcgc atccatgatg
    23821 gtcagaggaa tattggtaat cggctgctga cccgatttgc tgacttcgcc ggtgacgtac
    23881 gctttttgcg atcggaacgc cgcgacgctg acatcgactt gcgggctttc aatgactgaa
    23941 tcgagacgcg ctgtaatctc gttgcgtacc tgggtaagtg ttttcccggc cactttcagg
    24001 cgaccaatat aggggtagaa aatcgcacca tcggcgttaa cccagttgcc ggtatcactg
    24061 gcgctacggt attgccctgc gggggtggtt agttccgggt gatcccagac cgtaaccatc
    24121 aacacatcac caatcccgat acgatattca tagtttgcga tttgctgctc cagctccggg
    24181 ttagcctgcg acataatcgg tttggcgcgc aactgatcaa tcaatcctgg cgtgacggga
    24241 tagatattga ccattttgtc caggtcatac tgattgtcag gtagttcaat gacatccttg
    24301 ttactggtcg ataaattctg accaggaaca agggtacatg ctgtcaaaga cagaacagcc
    24361 aatgtcagta tcgaaaactt aaaaatgttc tttttcattg gtttatattt atcagtcaat
    24421 gtaatgttat gaattacgtc aggttattgt ccaaccggta cttctcgctc tgccgtcatt
    24481 ggatagagct ggtatttgcg tgacagcatt tgtccaccat cacgcgtcaa tggtgtccac
    24541 gaaaccaccg cgcggttgcg gttaggtcca atggtcatca agtcgaatgg aatcgagata
    24601 taaaaacctt tactaaagcc gccttcgccg tagtcatctt tagatacgtt actgattgcc
    24661 gcccataccc ctaccgccac gccgctgtca aagcgtttgg cgacgtcgat cgttgcgcct
    24721 ttatcttttg ccagatattg cccaacgcta agtttcatca gtacgccatt gagcgtcggc
    24781 gggttccagt aagccgtcac gaaaccagtt ggcgtggaat aatcggtgaa gcgcatcatg
    24841 ttgtcccagt cacgttgctt cacgtagtta acgtccacac ccagcgccca gctggcatct
    24901 agcgggcgat aaagcagctc ggaaccgaca ccggcgtaca tcgtttccag ataaccgcca
    24961 tacacctggc catagaaacc attgcctaag tcggcaaagt agttcgcctg caagttgttg
    25021 agataaacgt cattgcgaac gtaatcacgg atatgcgtgc gcacgcgggg cagggtagag
    25081 tccgcgggca acagcgaaga cttaaacttg tcgtagttgt tgtaaatatt ggtgaaaata
    25141 ccgccatcaa gcagcaggtg gtcggtaaac cagtagcggg cactgggcat cagccccagc
    25201 tggaacatat agaaatcttc cgggccgccc agcgactgtg aaagtgttgg gttgaaagag
    25261 tagctaaagc gatcttcacg aatacggtag ccccgaccaa aggcagaaag atcttctgct
    25321 tcaacacgtt gttgttgaag ttgctctgat tgaccaggcg ctgtaccagc cagctgtttg
    25381 cgcaggctgg ctacgtcggt ttcggtagtc accatcgcca tatgctcgcg cttttgcgtc
    25441 acgctaatct tctcaacgcc ttgcggcagg ttattcacca gaatccggtt ggcacgatcg
    25501 accgcttcgc gagaatcacg gtatttgtat tgttgaccag acatatacag cgtcttatcg
    25561 cgcagctgaa tttccggtgc ttcaaaacct gcgttgtact tcagcgcggt aagttggttc
    25621 gctactgtgg tgtactgcaa tccttcagat tcaggcgcag gttgatatgc cggttttggc
    25681 gtatcgcgca gggcagggcg cagatcgttg aaattggtcc gtaacgtgaa gccaaacatc
    25741 aacgtgttac cgcgttcata actcaggttg agatctgccc agctggcagc gcgataaact
    25801 gcgccgacgt tgaaatggct tgcctgaggc agtttgccag cgaaatcatt ctggtaattg
    25861 ttgccatcgt attcgagttt cagacgcagg ggattccacg gcgtttgata ctcaatgccg
    25921 ccaaagatgg aagccgggcc acgaaagata tcgctaaagc tgatatcgcc cgcatcgtga
    25981 gactctgcgc gatgacaata tttatcgctc acccggcaaa acgggttggt aatattgccc
    26041 gcattaccgg cgtagcccca tgccatcccg agggtgaaat caaatggccc cgcttgcttg
    26101 ctggccacca gatactcacc gtcaaacaga cccgtaccag caatatcacg tttaccaaac
    26161 gccacttgcg gtagccagta accttcttcc cacaggcgaa gtttaaaatc gaatgatttg
    26221 tctttgtatg actgatcgcc gctgaaatct tcccactggc tatatttgcg tgtgcgcaca
    26281 tccgtataac gaatggtgcc ttccagccat gggaacagcg ccacggaggt ggagtagaac
    26341 cggtattgat cgttatcccg gtagttgacg ctgaattcac cttccggtgc gatgcgcgca
    26401 tttggcatct gcaacaatcc tgtgccgcca aagtctgatt gcgacgaacc cagcggatcc
    26461 gggtaggtta atacttcagc atgacaggca ctggagacgg caatggccag gcagcttaaa
    26521 agataagaat tcttcttcat cagtcaggaa cacgttgcgt taaaacagac acaatctggt
    26581 catttaaatc agcatatttt tcgggcagta catgcgcaga aaagcccaac caaagctggc
    26641 tgccaggcgg tggttccaca tgtcttttat tccacagggc aacaggggcg acgacagtct
    26701 caccctcagg cgtaatcacc ataacgttat tcttgtccgc gcctgcaagg cgggggtgat
    26761 cttgcagata atcggtaacg ctacggcctg cctgccaggg caattgcccg gccccagaaa
    26821 ccgcacccag cagagtaata gtcaccggac gctgtacggt atagagcgta tagtccccga
    26881 ccaacggggg attgctgttc tcatccactc gaacaaaatc agggtccagt ttgaccggta
    26941 agcgaccagt gatattgaga ttgagtaact gctggcgcac ggatttaatc gttgccgcca
    27001 catcgtcgtt agcttctgct tcccaggaag caagctgtgc catgacatgt tggtagtctt
    27061 taagcgcttt agctttcgcc gcagagtcgg tcagcaaggc accaggccac cagaggcgat
    27121 cgcgcagttg cggttgtgtc accaactgga caacattttc catggggcca acggaaagtg
    27181 tctgttgttc gccaggcaga taaatagtca ccgttccttg cgcaaaggca tggggtgtca
    27241 ttacgtaaag tacgctggca atgaaatacg actgtaattt attcatggtg cgggtttaag
    27301 aaacgtcatt tctacgggaa taacccctgc gcctaacatt tgccgacttt gatgaacctg
    27361 gccagtagcc gaatcgaccc agaatgtgtt ttgccactgt ttttctggcc gcgtggaagt
    27421 cacctcttcc tgccagacat tacacagcac attgcgaccc gcaatattca gcgtctctaa
    27481 tccagcaaag gaaaaagtag aactcagggt cgcagagcga aaatggttgt cttcactcca
    27541 gagaatatcg cgcgtccagc ggctgccatc ttttattgcc agcgcgttac gcagagggtc
    27601 ctgcccggaa tttgtcactt ccagcagatt attattaagt ttgacggttt ttaaaagacg
    27661 tccattgtgg gtaaccagca tggcgttatc ctgggataac catttgcttt gttcttgttc
    27721 tatatatccc agtaccacaa agattcgttg cccttcatta aggcgtaaat acatcgtgga
    27781 ataaggcaac gcctggatct gctgatccgc tacggtgata tcctgattat cgaaaaggct
    27841 ggcgcgaaat gtatcgacca tactttgctg gctgtgcgta catcccgcaa gaaatagtgc
    27901 gaaaatcgat aaaataagag ggcgcacctt taatccttga aaggttaatt aaaaaaatgc
    27961 aaatctttaa agcccggtac gaatatcgca accgggtatc atttaacttt aatttcgacg
    28021 cgttaaagca gtattagcgt gtagtggacg tggtggttga ggtgttatga gaaccgccat
    28081 cgccactgtc atttgctgca acaactgcca acgtcgccac accaacagcc gttgccacac
    28141 cgacaactgt cgccgtgccg acagcgccag cagccacgcc accagtggta gtagcagtcg
    28201 tggttgcgcc ggtagtggtc gttgtggtgc cagtagtacc cgtcgttgcc tcggtcccgt
    28261 ttgttgcttc aggggcagca aacgcagctg gcgtcgtcaa catgaaggcc ataaggattg
    28321 cagaaagctt gtgtttcata acttttcctt tattcatcgc atggacaata cgtacgcttg
    28381 agatcaggat tgtctacttt gagtataaca tccttgtgaa atctcccttt cctcataccg
    28441 cttgcactat atactgcggg taggaaaggc gcgcagaggg aaatataaga ttgttaacta
    28501 tccccctctg gaaatacgac ttgtgagcat aagataaatc ttagcaaaat acaaattaaa
    28561 gataaggaaa ttgttacgaa agctattaat tattgttggt aatatagttt caagtggtac
    28621 tataactggc tgttaaatgg catttataac tattaggtgc agagatattc gcttaaatgg
    28681 attagtttct ttgtggaaaa gtaactgatg ttataatata tgatgttgac tattgcacta
    28741 ttccaataaa accagtcagc tttaaacaag cagcgtcata ttaagagaga taaacatttg
    28801 ccgctgttgg tcctcgcagg ccatttacgc ggcaaaattc cacacgtaat cctggtataa
    28861 gcacttctgc gtcgcgggga gtgaatgcgg aaatatggac ctgaacttct ttacgaccgt
    28921 cggaggggat aatgaatcct ttgccgcttt tgcgatcaaa ggttttgaca attcctgtca
    28981 ttttacggga caaacaaatt ccttactgaa aatactgcgc tgcactatac ggggttaata
    29041 aaataaagcc agcgatattt aagaccgccg gacggctaaa ataaaatttg cttaatctca
    29101 attatcatgc gttaatagct gcgtcggttt gaaagacaga cagcatacaa agtagtttac
    29161 taaagcagtt ctcattatca ggcattatcc ccttcttttg agtctctctc ctgaacacta
    29221 agtagtttct gtattaaagc cctgtttgcc gaaaggccca aaatgaagga agtaaaatat
    29281 gtctaataaa atgactggtt tagtaaaatg gtttaacgca gataaaggtt ttggctttat
    29341 cactcctgat gatggcagca aagacgtttt cgtccatttc actgccatcc agagcaatga
    29401 attccgcacg ctgaacgaaa atcagaaagt tgaattttct attgagcagg ggcaacgtgg
    29461 ccccgcggca gcgaacgttg ttacgctcta aggttgccgt tattactcaa catctccatt
    29521 tccgctgtcc atgttgtcat ggttcacagt accgcacatc ggcattcgat gtgacggagc
    29581 gaaatccttt gggcgctaag tgtatttttt gtaaatcgac gatgatcacc tttgataacg
    29641 ttgcgctgca aatacgcact gaccatgcgc cgctggattt cacaaaataa tatcaggctc
    29701 cctcg
//
LOCUS       DADMHC010000029        29424 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.029, whole genome shotgun sequence.
ACCESSION   DADMHC010000029 DADMHC010000000
VERSION     DADMHC010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29424)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29424)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29424
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.029"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            1..183
                     /locus_tag="JNZ57_001072"
                     /pseudo
     CDS             1..183
                     /locus_tag="JNZ57_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001699175.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
     gene            180..740
                     /locus_tag="JNZ57_001073"
                     /pseudo
     CDS             180..740
                     /locus_tag="JNZ57_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000154988.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
     gene            complement(783..1643)
                     /gene="rsmI"
                     /locus_tag="JNZ57_001074"
     CDS             complement(783..1643)
                     /gene="rsmI"
                     /locus_tag="JNZ57_001074"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HAY8827370.1"
                     /translation="MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAE
                     DTRHTGLLLQHFGINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPG
                     YHLVRTCREAGIRVVPLPGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIE
                     AEPRTLIFYESTHRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVK
                     EDENRRKGEMVLIVEGHKAQEEDLPADALRTLALLQAELPLKKAAALVAEIHGVKKNA
                     LYKYALEQQG"
     gene            1707..3743
                     /locus_tag="JNZ57_001075"
     CDS             1707..3743
                     /locus_tag="JNZ57_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HAY8827371.1"
                     /translation="MVPSTFSRLKAARCLPVVLAALIFAGCGTHTLDQSTAYMQGTAQ
                     ADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTRQAVELFNQLPQELNDSQRREKT
                     LLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIA
                     QEPLLGAKEKKQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDP
                     DMMKAGIADWQKRYPNNPGAKMLPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGCTI
                     QQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTADGVASPAQASVSDLTGDQPAAQ
                     PVPVSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNV
                     EELLKSNTPLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIP
                     RSSLGDRVANAFAQEWQKLGGGTVLQQKFGSTSELRAGVNGGSGIALTGTPITPRATT
                     DSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQSGAML
                     YASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMG
                     VDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVINRKLSWLQYQQGQVVPAS"
     gene            3701..4096
                     /locus_tag="JNZ57_001076"
     CDS             3701..4096
                     /locus_tag="JNZ57_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HAY8827372.1"
                     /translation="MATVPTRSGSPRQLTTKQTGDAWEVQARRWLEGKGLRFVAANVN
                     ERGGEIDLIMREGWTTVFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGS
                     FDTVDCRFDVVAFTGNEVEWIKDAFNDHS"
     gene            4116..4706
                     /gene="diaA"
                     /locus_tag="JNZ57_001077"
     CDS             4116..4706
                     /gene="diaA"
                     /locus_tag="JNZ57_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA initiator-associating protein DiaA"
                     /protein_id="HAY8827373.1"
                     /translation="MQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKI
                     LCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQ
                     VRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVE
                     IRIPSHRSARIQEMHMLTVNCLCDLIDNTLFPHQDD"
     gene            4716..5291
                     /gene="yraP"
                     /locus_tag="JNZ57_001078"
     CDS             4716..5291
                     /gene="yraP"
                     /locus_tag="JNZ57_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divisome-associated lipoprotein YraP"
                     /protein_id="HAY8827374.1"
                     /translation="MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQ
                     VDDGTLEVRVNSALSKDEQIKKETRINVTAYQGKVLLVGQSPNAELSARAKQIAMGVD
                     GANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMG
                     LVTEREAKAAADIASRVSGVKRVTTAFTFIK"
     gene            complement(5405..6445)
                     /locus_tag="JNZ57_001079"
     CDS             complement(5405..6445)
                     /locus_tag="JNZ57_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HAY8827375.1"
                     /translation="MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWQHYYGKAFTA
                     AETHSIGKSILAQADANPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLR
                     TLGQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPAT
                     LVFMGFVLGWGFAAIRLVAGLVMVLLIATLVQKWVRETPQTQAPVEIDIPEAQSGFFS
                     RWGRALWTLFWSTIPVYILAVLVLGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVI
                     PTAAEIPIVQTMMLAGMGTAPALALLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAV
                     SGVIVGGLALLF"
     gene            complement(6518..7153)
                     /locus_tag="JNZ57_001080"
     CDS             complement(6518..7153)
                     /locus_tag="JNZ57_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417621.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HAY8827376.1"
                     /translation="MSQVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGDMPGV
                     FNPHDPQLSDALAQVTDPIDIVFCCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLG
                     AQHMLVVSAMGANAHSPFFYNRVKGEMEEALIAQNWPKLTIARPSMLLGDRSKQRMNE
                     TLFAPLFRLLPGNWKSIDARDVARVMLAEAMRPEHEGVTILSSSELRKRAE"
     gene            7281..7799
                     /gene="yhbO"
                     /locus_tag="JNZ57_001081"
     CDS             7281..7799
                     /gene="yhbO"
                     /locus_tag="JNZ57_001081"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417622.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein/nucleic acid deglycase"
                     /protein_id="HAY8827377.1"
                     /translation="MSKKIAVLISDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVK
                     GKKGEASVTIDKSIDEVTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFA
                     ICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLP
                     AFNREALRLLGA"
     gene            complement(7779..8222)
                     /locus_tag="JNZ57_001082"
     CDS             complement(7779..8222)
                     /locus_tag="JNZ57_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhbP family protein"
                     /protein_id="HAY8827378.1"
                     /translation="METLITISRWLAKQHVVTWCVQQEGELWCANAFYLFDAQKVAFY
                     ILTEEKTRHAQMSGPQAAVAGTVNGQPKTVALIRGVQFKGEIRRLEGEESDLARKAYN
                     RRFPVARMLSAPVWEIRLDEIKFTDNTLGFGKKMIWLRDSGTEQA"
     gene            8273..8575
                     /gene="yhbQ"
                     /locus_tag="JNZ57_001083"
     CDS             8273..8575
                     /gene="yhbQ"
                     /locus_tag="JNZ57_001083"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708956.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage response exodeoxyribonuclease YhbQ"
                     /protein_id="HAY8827379.1"
                     /translation="MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKG
                     ELTLAFSAPVGDRSLALRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPEIKSD"
     gene            complement(8562..9065)
                     /locus_tag="JNZ57_001084"
     CDS             complement(8562..9065)
                     /locus_tag="JNZ57_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HAY8827380.1"
                     /translation="MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGL
                     VATDDEGQVIGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARKLVYEGLDSLNE
                     FGYAAVVTLGDPALYSRFGFELAAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEY
                     HEHFNRF"
     gene            complement(9059..9583)
                     /locus_tag="JNZ57_001085"
     CDS             complement(9059..9583)
                     /locus_tag="JNZ57_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HAY8827381.1"
                     /translation="MLNKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQA
                     LDDGELEFLEGRRLSIHVRDIDLQWFTSVVNGKLVVSQNAQADVSFSADASDLLMIAA
                     RKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRMMLLQLADFVEAGMK
                     TAPETKQTSVGEPC"
     gene            9792..10772
                     /locus_tag="JNZ57_001086"
     CDS             9792..10772
                     /locus_tag="JNZ57_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017457364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HAY8827382.1"
                     /translation="MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTE
                     KKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEY
                     AAERYPNIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPL
                     EVFAFGSLCIMSEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLID
                     RYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQR
                     SPAYVSQVAKVWRQAIDRCKADPQSAWMETLGSMSEGTQTTLGAYHRKWQ"
     gene            10781..11659
                     /locus_tag="JNZ57_001087"
     CDS             10781..11659
                     /locus_tag="JNZ57_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312067.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HAY8827383.1"
                     /translation="MKYSLGPVLWYWPKETLEDFYQQAATSSADVIYLGEAVCSKRRA
                     TKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNM
                     CAERKLPFVAGHALNCYNAVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRN
                     QFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLN
                     GIQTMSGYVYNLGNELTSMQGLVDVVRLSPQGTDTFAMLDAFRANENGAAPLLLTANS
                     DCNGYWRRLAGLELQA"
     gene            11865..12872
                     /locus_tag="JNZ57_001088"
     CDS             11865..12872
                     /locus_tag="JNZ57_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HAY8827384.1"
                     /translation="MTDKTIAFSLLDLAPIPEGSSAREAFSHSLDLARLAEKRGYHRY
                     WLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLY
                     PGRIDLGLGRASGSDQRTMMALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPG
                     YGEKIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKP
                     YAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGV
                     QQALSMSLVGDKAKVRHGLQSILRETDADEIMVNGQIFDHQARLHSFELAMDVKEELL
                     G"
     gene            complement(12990..14234)
                     /gene="mtr"
                     /locus_tag="JNZ57_001089"
     CDS             complement(12990..14234)
                     /gene="mtr"
                     /locus_tag="JNZ57_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005131807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan permease"
                     /protein_id="HAY8827385.1"
                     /translation="MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWS
                     MAALIFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYIL
                     TYAYISASGSILHHTFAEMSLNVPARAAGFGFALLVAFVVWLSTKAVSRMTAIVLGAK
                     VITFFLTFGSLLGHVQPATLFNVAESNASYAPYLLMTLPFCLASFGYHGNVPSLMKYY
                     GKDPKTIVKCLVYGTLMALALYTIWLLATMGNIPRPEFIGIAEKGGNIDVLVQALSGV
                     LNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAMGRLKTALLTFAPPV
                     VGGLLFPNGFLYAIGYAGLAATIWAAIVPALLARASRKRFGSPKFRVWGGKPMITLIL
                     VFGVGNALVHILSSFNLLPVYQ"
     gene            complement(14388..16277)
                     /locus_tag="JNZ57_001090"
     CDS             complement(14388..16277)
                     /locus_tag="JNZ57_001090"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417631.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH family ATP-dependent RNA helicase"
                     /protein_id="HAY8827386.1"
                     /translation="MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGR
                     DVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMR
                     GVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADE
                     MLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRP
                     DISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALN
                     GDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIG
                     RTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQ
                     QQLESSDLDQYRALLSKIQPTAEGEELDLETLAAALLKMAQGERTLIVPPDAPMRPKR
                     EFRDRDDRGPRDRNDRGPRGDREDRPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAI
                     ANEGDISSRYIGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPH
                     TGGERRGGGRGFGGERREGGRNFSGERREGGRGDGRRFSGERREGRAPRRDDSTGRRR
                     FGGDA"
     gene            complement(16270..16350)
                     /gene="yrbN"
                     /locus_tag="JNZ57_001091"
     CDS             complement(16270..16350)
                     /gene="yrbN"
                     /locus_tag="JNZ57_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YrbN"
                     /protein_id="HAY8827387.1"
                     /translation="MKIADQFHDELCRLAAINFEAHVLHG"
     gene            complement(16457..17341)
                     /gene="nlpI"
                     /locus_tag="JNZ57_001092"
     CDS             complement(16457..17341)
                     /gene="nlpI"
                     /locus_tag="JNZ57_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020802045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein NlpI"
                     /protein_id="HAY8827388.1"
                     /translation="MKPFLRWCFVATALTLAGCSNTSWRKSEVLAVPLQPTLQQEVIL
                     ARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYL
                     GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD
                     PNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMER
                     LKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVVNNVHNFVEHRYALL
                     ELSLLGQDQDDLAESDQQ"
     gene            complement(17450..19585)
                     /gene="pnp"
                     /locus_tag="JNZ57_001093"
     CDS             complement(17450..19585)
                     /gene="pnp"
                     /locus_tag="JNZ57_001093"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312072.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HAY8827389.1"
                     /translation="MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTV
                     VGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPL
                     FPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQ
                     YVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQN
                     INELVKEAGKPRWDWQPEPVNEALNARVAALAEARLSDAYRITDKQERYAQVDVIKSE
                     TIATLLAEDETLDENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVL
                     PRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGETGM
                     VGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLAL
                     MDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSREGISALQMD
                     IKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKINPDKIK
                     DVIGKGGSVIRALTDETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEITAEIEVGRV
                     YTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQ
                     GRIRLSIKEATEQSQPAAAPEAPAAEQGE"
     gene            complement(19832..20101)
                     /gene="rpsO"
                     /locus_tag="JNZ57_001094"
     CDS             complement(19832..20101)
                     /gene="rpsO"
                     /locus_tag="JNZ57_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004933502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HAY8827390.1"
                     /translation="MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFA
                     EHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTQLIERLGLRR"
     gene            complement(20250..21194)
                     /gene="truB"
                     /locus_tag="JNZ57_001095"
     CDS             complement(20250..21194)
                     /gene="truB"
                     /locus_tag="JNZ57_001095"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HAY8827391.1"
                     /translation="MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHT
                     GALDPLATGMLPICFGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVT
                     FSAEQLAAALDTFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLF
                     IRHEGNELELEIHCSKGTYIRTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEH
                     LRELVEQAEQQDIPAAELLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAP
                     LEGLVRVTEGENGKFIGMGEIDDEGRVAPRRLVVEYPA"
     gene            complement(21194..21595)
                     /gene="rbfA"
                     /locus_tag="JNZ57_001096"
     CDS             complement(21194..21595)
                     /gene="rbfA"
                     /locus_tag="JNZ57_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001712908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HAY8827392.1"
                     /translation="MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMS
                     RDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNS
                     LVEGMRMSNLVTSVVKHDEERRVNPDDSKED"
     gene            complement(21759..24431)
                     /gene="infB"
                     /locus_tag="JNZ57_001097"
     CDS             complement(21759..24431)
                     /gene="infB"
                     /locus_tag="JNZ57_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HAY8827393.1"
                     /translation="MTDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAKEKQT
                     LIDHLNQKNSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERL
                     AAEEQAQREAEEQARREAEESAKREAQQKAEREAAEQAKREAAEQAKREAAEKDKVSN
                     QQDDMTKNAQAEKARREQEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTDN
                     AEPTEDSSDYHVTTSQHARQAEDESDREVEGGRGRGRNAKAARPKKGNKHAESKADRE
                     EARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIK
                     AMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAP
                     VVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAA
                     FTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPD
                     RVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMAS
                     GAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSI
                     PVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMT
                     EGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASN
                     AILVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLA
                     EVRDVFKSPKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVR
                     NGMECGIGVKNYNDVRTGDVIEVFEIIEIQRTIA"
     gene            complement(24456..25943)
                     /gene="nusA"
                     /locus_tag="JNZ57_001098"
     CDS             complement(24456..25943)
                     /gene="nusA"
                     /locus_tag="JNZ57_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005131833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HAY8827394.1"
                     /translation="MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEID
                     VRVQIDRKSGDFDTFRRWLVVDEVTQPTKEITLEAARYEDESLNLGDYVEDQIESVTF
                     DRITTQTAKQVIVQKVREAERAMVVDQFREHEGEIITGVVKKVNRDNISLELGNNAEA
                     VILREDMLPRENFRPGDRVRGVLYSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGE
                     EVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLW
                     DDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGW
                     ELNVMTVDDLQAKHQAEAHAAIDTFTKYLDIDEDFATVLVEEGFSTLEELAYVPMKEL
                     LEIEGLDEPTVEALRERAKNALATIAQAQEESLGDNKPADDLLNLEGIDRDLAFKLAA
                     RGVCTLEDLAEQGIDDLADIEGVTDEKAGALIMAARNICWFGDEA"
     gene            complement(25971..26423)
                     /gene="rimP"
                     /locus_tag="JNZ57_001099"
     CDS             complement(25971..26423)
                     /gene="rimP"
                     /locus_tag="JNZ57_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004125659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HAY8827395.1"
                     /translation="MSTLEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSED
                     GINVDDCADVSHQVSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLV
                     LRMAVQNRRKWQGVIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF"
     gene            complement(26630..26706)
                     /locus_tag="JNZ57_001100"
     tRNA            complement(26630..26706)
                     /locus_tag="JNZ57_001100"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(26670..26672),aa:Met,seq:cat)
     gene            27054..28397
                     /gene="argG"
                     /locus_tag="JNZ57_001101"
     CDS             27054..28397
                     /gene="argG"
                     /locus_tag="JNZ57_001101"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HAY8827396.1"
                     /translation="MTTILKHLPVGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTAN
                     LGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNT
                     TPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDT
                     DFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEYLNSSVKIVN
                     PIMGVKFWDESVKIPAEEVTVRFEQGHPVALNGKTFSNDVEMMLEANRIGGRHGLGMS
                     DQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHAHGRQLGRLLYQG
                     RWFDSQALMLRDSLQRWVASQITGEVTLELRRGNDYSILNTVSENLTYKPERLTMEKG
                     DSVFSPDDRIGQLTMRNLDITDTREKLFGYAKTGLLSSSATSGVPQVENMENKGQ"
     gene            complement(28405..>29424)
                     /locus_tag="JNZ57_001102"
     CDS             complement(28405..>29424)
                     /locus_tag="JNZ57_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HAY8827397.1"
                     /translation="LLSIANTVPYFQLSVRDTGIDTYVLIVGESVRVDNMSLYGYTRS
                     TTPQVEAQRKQIKLFNQAISGAPYTALSVPLSLTADSVLSHDIHNYPDNIINMANQAG
                     FQTFWLSSQSAFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQNTQQKKLIV
                     LHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYTDSLLGQVFELLKDRRASVMY
                     FADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFSTAYN
                     NYLINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMFRKEFTEDKQGNPP
                     PEGQG"
BASE COUNT         7031 a         8059 c         7380 g         6954 t
ORIGIN      
        1 tcacaaccga ccaggttgtc tctgttaaca cccgattcac acagataaaa agcagcaccg
       61 tatattctgc tgcaacccaa acgggtgttt gccagggtga cacgtctcgt tatggacccg
      121 ttaatattgg tgcaaatacc acctttaccc tgtatgtcac caagccattt ctcggctcga
      181 tgaccattcc gaaaacggat attgccgtca ttaaaggcgc gtgggtcgat ggaatgggaa
      241 gcccgtctac aggtgacttc catgatttag tcaagttatc gattcaggga aatctcaccg
      301 ccccacagtc atgcaaaatt aatcagggcg atgttattaa ggttaatttt ggattcatca
      361 atggtcagaa gtttaccacc cgtaatgcca tgccagacgg ttttactcca gtagactttg
      421 atatcactta tgactgtggt gatacttcaa agattaaaaa ctcgttgcaa atgcgcatcg
      481 acggtacaac tggggtagta gaccagtaca acctggtcgc caggcgaaga agttcagaca
      541 atgtgcccga tgtcggtatt cgtattgaaa atctcggcgg cggagttgca aatattcctt
      601 ttcagaacgg tatccttccc gttgatcctt ccgggcatgg caccgtcaat atgcgcgcct
      661 agccagttaa tctggtcggt ggtgagctgg aaacaggaaa atttcagggc acagccacca
      721 ttaccgtcat ggtgcggtaa aagaagacgt tgcgttttga ttaacgcaac gcttcggcac
      781 tgttacccct gctgctccag cgcatactta tacagcgcat ttttcttcac gccatgaatt
      841 tctgcgacca gcgccgccgc ttttttcagc ggcagttctg cctgtagcag cgccagcgtg
      901 cgcagggcat cggcgggtaa gtcttcttcc tgtgctttat gaccttcgac aatcagcacc
      961 atttcgcctt tgcgacggtt ttcatcttcc tttacccacg ccagcagttc gccaacgggc
     1021 gcgccgtgaa tggtttccca ggttttggtc agctcacgcg ccagaaccac gtagcgggat
     1081 tcgcctaata ccgcaacgat atcttccagg ctatctaaca gacggtgggt ggattcataa
     1141 aaaatcagcg tgcgcggctc cgcttcaatg gcttttagcg catcacggcg gccttttgat
     1201 ttggcaggta aaaagccttc gtaacagaaa cggtcagagg gtaaacccgc ggcgcttaac
     1261 gcagtgatag cagcacacgg cccgggtagc ggcaccacgc gaatccccgc ttcacggcag
     1321 gtacgcacca gatggtagcc aggatcgtta attagcggcg ttccggcatc ggaaaccagc
     1381 gcaatgtttt gcccctcttg cagcttcgcc agcagcgttt cggctttttg ttgttcgtta
     1441 tggtcgtgca gcgcaaacaa ccgggcatta atcccaaaat gttgcagcaa taaaccggtg
     1501 tgacgagtat cctcggcggc aatcagatca acggcctgta atacctctaa cgcacgctgg
     1561 gtgatatccg ccagattgcc gattggcgtc ggtacaatgt aaagctggcc ctgagaatta
     1621 tccgccgatt ggtgttgttt cattgtgtcg tccgtattgc cgatttaata ttgagcattg
     1681 cgtaaaaaaa tatcactgga tacattatgg taccctcaac attttctcgt ttgaaagccg
     1741 cgcgttgtct gcctgttgtt ctggcagccc tgattttcgc cggttgtggc acccatactc
     1801 tcgatcagtc cactgcttat atgcagggca cggcgcaggc tgattctgcc ttttatcttc
     1861 agcagatgca gcaaagctct gatgatacca ggatcaactg gcaattactc gccattcgtg
     1921 cactggtgaa agaaggtaaa accaggcagg cggttgagtt gtttaaccaa ctaccgcaag
     1981 aactgaacga ttctcagcgt cgcgagaaaa cactgctggc ggtagagatt aaactggcgc
     2041 agaaagattt tgctggcgcg caaaacttgc tggcgaaaat cacacctgcc gatttagaac
     2101 aaaaccagca agcgcgttac tggcaggcaa aaatcgatgc cagccagggg cgtccttcca
     2161 ttgatttact gcgcgcgtta attgctcagg aaccgctgct cggcgcgaaa gaaaaaaagc
     2221 agaatattga tgccacctgg caggcgctct cctccatgac tcaggaacag gcgaatacgc
     2281 tggtgatcaa cgccgacgaa aatattctgc aaggctggct ggatctgcag cgcgtctggt
     2341 ttgataaccg taacgatccc gatatgatga aagccgggat cgccgactgg cagaaacgtt
     2401 atccgaacaa tccgggcgcg aaaatgctgc caacgcagtt ggttaacgta aaagcgttta
     2461 aaccagcctc gaccaacaaa atcgccctgc tgttgccgct gaatggccag gcagcggtat
     2521 ttggttgcac tattcagcaa ggctttgaag cggcgaaaaa tatcggcact cagccagtgg
     2581 cggctcaggt agctgccgca cctgccgcag acgtagcaga acaacctcag ccgcaaactg
     2641 cggatggcgt tgccagcccg gcacaagcct cggttagcga tctgaccggt gatcagcctg
     2701 cggcccagcc ggtgcctgta agcgccccgg cgacaagcac cgcagcggta agcgcacccg
     2761 caaatccatc cgcagagctg aaaatctacg atacctcatc acaaccactt agccagatct
     2821 taagccaggt tcagcaggat ggcgcgagta ttgtggttgg tccgttgctg aaaaataacg
     2881 ttgaagagtt gcttaagagc aacaccccgc tgaacgtgct ggcactgaac cagccggaga
     2941 atatcgaaaa ccgcgtcaat atttgttact tcgcgctttc accggaagac gaagcgcgcg
     3001 atgcagcgcg tcatattcgt gaccagggta aacaagcgcc gctggtgctg atcccacgca
     3061 gttcattggg cgatcgcgta gccaatgcgt ttgcgcagga gtggcagaaa ctgggcggcg
     3121 gcaccgttct gcaacaaaaa tttggttcca ccagcgaatt acgcgcgggt gttaacggcg
     3181 gttctggtat cgctttaacg ggtaccccga ttactcccag agcgacaacc gactccggca
     3241 tgacgaccaa caatccaacg ctgcaaacca cgccaaccga tgaccagttc accaataatg
     3301 gcggtcgtgt cgatgcggtg tacattgtgg caacgccggg tgaaatcgct tttatcaaac
     3361 cgatgatcgc catgcgtaac ggtagccaga gcggtgcaat gctgtacgcc agctcccgca
     3421 gcgcacaagg caccgcaggc ccggatttcc gtctggagat ggaaggtttg cagtacagcg
     3481 aaatcccgat gctggcgggc ggtaatctgc cgttaatgca gcaggcactc agcgcggtga
     3541 ataacgatta ttcactggct cgcatgtatg cgatgggcgt cgatgcctgg tcgctggcaa
     3601 atcatttctc acaaatgcgc caggttcagg gttttgaaat caacggtaat accggaagcc
     3661 tgacggcaaa cccggattgc gtgattaaca ggaagttatc atggctacag taccaacaag
     3721 gtcaggtagt ccccgccagt taaccaccaa acagaccggc gatgcgtggg aagtacaagc
     3781 gcgtcgctgg ctggaaggca aaggactgcg atttgtcgcc gctaacgtga acgagcgtgg
     3841 cggtgagatc gatctgataa tgcgtgaagg ctggaccacc gtttttgtcg aggtgcgtta
     3901 ccgccgctct gcgctttatg gcggcgcggc agccagtgtg acccgcagca aacaacacaa
     3961 attattacag actgcccgct tgtggctcgc gcgtcataat gggagttttg atactgtgga
     4021 ttgccggttc gatgtggtag ccttcaccgg gaatgaggtt gagtggatta aggatgcctt
     4081 taatgaccac tcataattaa ggtttaagga ttagcgtgca agaaagaatt aaagcttgct
     4141 tcactgaaag cattcaaact caaattgcgg cggcagaggc gcttccggat gccatctccc
     4201 gtgcagccat gacgctggtt cagtctctgc tcaatggcaa caaaatcctc tgttgtggta
     4261 atggaacttc cgctgccaat gcacagcatt ttgctgccag catgatcaac cgtttcgaaa
     4321 cggagcggcc cagcttacct gccattgcac taaatactga taatgttgtc ttaacggcga
     4381 ttgccaacga tcgcttacat gatgaagtgt atgcaaaaca ggtgcgggcg ctgggtcatg
     4441 cgggagatgt attgttagcc atttccaccc gtggcaacag ccgcgatatt gttaaagcag
     4501 ttgaagccgc cgttacgcgt gatatgacca ttgtggcatt gaccggctat gacggcggcg
     4561 aacttgcagg tttgttaggg ccacaggatg tggagatccg cattccttcg catcgtagtg
     4621 ctcgcattca ggaaatgcat atgctgacgg taaattgcct gtgcgatctg atcgataaca
     4681 cgcttttccc tcaccaggat gattaaggag aatacatgaa ggcattatcg ccaatcgcag
     4741 tccttatttc cgcgctgctg ttgcaaggtt gtgttgccgc tgccgtagtg ggtaccgctg
     4801 ctgtgggtac caaagccgca actgacccac gcagtgtcgg cacccaggtg gacgatggta
     4861 ccctggaagt gcgcgtgaac agcgcattgt cgaaagacga acagattaag aaagaaaccc
     4921 gtattaatgt cacggcgtat cagggcaaag tgctgctggt tgggcagtca ccaaatgctg
     4981 aactttcggc tcgcgccaaa cagattgcta tgggcgtaga cggtgccaac gaagtgtata
     5041 acgagattcg tcagggccag ccgattggtc tgggcgaagc atctaacgat acgtggatca
     5101 ccaccaaagt gcgttcgcag ctcttaacca gcgacctggt gaaatcgtcc aacgtgaaag
     5161 tgaccaccga aaacggtgaa gtgttcctga tggggctggt gactgaacgt gaagcgaaag
     5221 cggcggcaga tattgccagc cgggtgagcg gcgtaaagcg ggtaaccaca gcgtttacgt
     5281 ttattaaata gcagcccctt gtaatgcctg atgcgacgct tgccgcgtct tatcaggcct
     5341 acaacgatgc aaaccgtagg tcggataagg cgtttacgcc gcatccgaca tgttttccct
     5401 caaatcagaa caacagcgcc agcccgccga caatcacacc agacactgcc accatcgccc
     5461 ctgtcagcca taaggctttc gccgggaacg ctttgcgcag cataatcagt gacggcaaac
     5521 tcactgccgg gagcgtcatc aacaatgcca gcgccggagc ggttcccata cctgccagca
     5581 tcatcgtttg tacaatcgga atttctgctg ccgtgggaat gacaaacaag catcctgcta
     5641 ccgccatcgc caccacccac atcaggctgt tatcgacagc accatcggca tgggggaata
     5701 accagacgcg tgcggcaccc aacaccagta ctgcaaggat gtaaaccggg atcgtactcc
     5761 agaaaagtgt ccatagcgcc ctgccccagc ggctaaaaaa accgctctgt gcttccggta
     5821 tgtcaatttc gaccggtgcc tgcgtttgcg gtgtttcacg cacccatttt tgcaccagcg
     5881 tcgcaatcag caacaccatc accagcccgg ccaccagacg aatcgccgca aaaccccagc
     5941 cgaggacaaa ccccataaac accagcgtcg ccgggtttaa caccggattg cccatccaga
     6001 atgccagcgc accgcccatc gatacctgtt ggcgacgcat ccccgccgcg accggagccg
     6061 cacagcaggt acacatcatg cccggcagcg aaaacagcgt tcccagcagc gtgccgcgaa
     6121 agcgcgattg cccaagcgta cgcaacaacc agtcacgcgg gatcagcacc tgaatcaacg
     6181 aaccgaggat cacccccagc accgccgctt tccatactgc gaggaaatag atcatcgcgt
     6241 aatccaacgc cgcttgccac ggattagcat ccgcctgcgc aaggatagat ttaccgatac
     6301 tgtgggtttc ggctgcagta aacgctttgc cgtagtaatg ttgccatttc acataccaga
     6361 gaccggcaat gacaacgaga aagaaaagcg cgggtttcca ccactgaatg ggcgttgccg
     6421 cctgagatga agactgacca gtcatagcat tccctaggaa taagttatga taattgagcg
     6481 cgtgaatatt acgctcacta tcaattcttg ggaataatta ttcagctctt ttgcgtaatt
     6541 ctgaagagct taaaatcgtc acgccttcat gctcaggccg catcgcctct gccagcatga
     6601 cccgcgccac gtctctcgca tcaatggatt tccagttacc tggtaacaaa cggaacagcg
     6661 gcgcaaaaag cgtttcgttc atccgctgtt tgctacgatc gcccagtaac atcgacgggc
     6721 gagcaatggt caatttcggc cagttctggg caattaatgc ttcttccatc tcccctttga
     6781 cgcggttata gaaaaacggc gagtgggcat tggcccccat agcactgacc accagcatat
     6841 gctgcgcgcc cagccgccgc ccggttaatg cggtatccac taccagcgtg taatcggcat
     6901 gaataaacgc ctctttgctc cccgcttctc gccgcgtggt gccgagacaa caaaacacaa
     6961 tgtcgatggg gtcggtgacc tgcgccaacg cgtcactcag ttgcggatca tggggattaa
     7021 acaccccggg catatcgccc aacggacgtc gcgtcggcgc agcaatggcg ttaactttcg
     7081 gttcattaat caacatccgc agcaggtgac cgcccaccag ccccgttgcg cctgtaatca
     7141 gtacctgact catcttcgct cctttacaga attgtctgcc ttgcgctcca cggctcatgc
     7201 accagtctta atagaccatg aggtaattat ccccgattgt gggaaattcg cctcatccaa
     7261 tgcaacaacg cggaggaagc atgagtaaga aaattgccgt tttaatcagt gatgaatttg
     7321 aggattcaga atttacttca cccgcagacg agttccgtaa agccggacac gaagtaatta
     7381 ccattgaaaa gcaagcgggt aaaacggtga aaggcaaaaa aggagaagcc agcgtgacca
     7441 tcgataaatc catcgatgaa gtgacgccag cggagttcga tgccctgctg ctaccgggcg
     7501 gccattcacc ggattatctg cgtggggaca accgttttgt cacctttacc cgtgattttg
     7561 tgaatagcgg caaacctgtt ttcgccatct gtcacggtcc gcagctgctg atcagcgccg
     7621 atgtgattcg ggggcgcaaa ctgaccgcag ttaaaccgat cattattgat gttaaaaatg
     7681 cgggcgcgga attttacgat caggaagtcg tggttgataa agatcagctg gttaccagcc
     7741 ggacaccgga cgatctgcca gcgtttaacc gcgaggcgtt acgcctgctc ggtgcctgag
     7801 tcgcgtagcc aaatcatttt tttaccaaag cccagcgtgt tgtcggtgaa tttgatttca
     7861 tcgagccgga tttcccacac cggggccgac agcattctgg caaccggaaa gcgacgattg
     7921 tacgccttgc gcgcgaggtc gctttcctca ccttccagcc tgcggatctc acctttaaac
     7981 tgcacaccgc gaattaacgc taccgttttc ggctgaccgt ttaccgttcc ggcaaccgca
     8041 gcctgcggcc cactcatctg cgcgtggcgc gttttttctt ccgtcaaaat gtagaaggcg
     8101 actttctgcg catcaaacag ataaaaagca ttagcgcacc acagttcccc ttcctgctgc
     8161 acacaccagg tgacaacatg ttgttttgcc aaccaacggc tgatggtgat gagtgtttcc
     8221 attgctgttc tcttttatac tgtgggcctg accttaacat gcgacgcaga cgatgacacc
     8281 ctggtttctt tacttgatcc gtaccgccga caataagctt tataccggga tcaccacgga
     8341 tgtcgaacgc cgctatcagc agcaccaaag cggcaaaggg gcgaaagcac tgcgcgggaa
     8401 aggagaactg acgctggcgt tttctgcgcc agtgggcgac cgttcgctgg cactacgggc
     8461 ggaatatcgc gttaagcaac tgaccaaacg gcaaaaagag cgtctggtag cggaaggcgc
     8521 agggtttgca gaactgttga gcagcctgca aaccccggag attaaaagcg attgaaatgc
     8581 tcgtgatact caaccagacc ggttacgcca ttcagcgcgt catccgctaa acgatgtacc
     8641 tggaaggcgc tttcagtgcc cggccagcgg caacgcagat cgtgatgcgc cgccagttca
     8701 aagccgaaac gactgtacag cgccggatcg cccagcgtca ccactgcggc atagccgaac
     8761 tcattaagcg aatcgagtcc ttcatagacc agtttgcgtg ccagcccctg tccacggtat
     8821 ttttcatcaa ccgccaacgg tgccatgccg acccattgca ggtcttcgcc ctgcacatca
     8881 accggactaa atgccacata gccaatgacc tgaccttcgt catctgtcgc caccagcccc
     8941 agcgtcagaa agccatcttc acgcagatcg tgaaccagct tcgcttccgc atcactttcg
     9001 aatgagcgac gcagcagggc atcaataccc ggcgcatcaa tgggaatttc tactcgaatt
     9061 agcatggttc acctaccgat gtctgtttgg tttcaggcgc ggttttcatt cccgcctcaa
     9121 caaaatccgc cagttgcagc agcatcatgc gtaaggcttt cggcatttgc tccagttcaa
     9181 tggcgtccat caggtttttc acatacagcc ccagctccgt atcgccttca atcaccagcc
     9241 gacgctggaa gaagagcgta tctggatctt gtttacgcgc cgcaatcatc agcagatcgc
     9301 tggcgtcggc actaaaactc acatcagctt gcgcgttctg gctgaccacc agtttgccat
     9361 tcaccaccga ggtaaaccat tgcaggtcaa tatcacgcac atgaatactt aacctgcggc
     9421 cttcaagaaa ctccagctcg ccatcatcca gcgcctgacg gaattgccag cttaagacct
     9481 gctcaagaac ctggcgtttt agcgcaaatg gcgtcagttt taccggtaca ctcaacagag
     9541 atggccccaa atgcacaata cgggaacgca gtttattcaa cacgagtttt actccctgtt
     9601 tcaacaatca tcctattttg ccatatcaga aaaataacat agcggtataa atcaacaatt
     9661 ccatatgaaa ttgctgctac caccaataca actttaactg ccttaaatca aaaattgtcg
     9721 cagcaaggtt aactaaaatc ccagttcgtt aacatttttg cgttttgata gcgcaacctt
     9781 caggaaaaat tatggagctg ctctgccctg ccggaaatct cccggcgctt aaggcggcca
     9841 tcgaaaacgg cgcagatgct gtttatatcg ggctaaaaga tgataccaat gcccgtcact
     9901 tcgccggcct taactttacc gagaaaaaat tgcaggaagc ggtgagtttt gtccatcaac
     9961 atcgccgcaa acttcacatc gcgattaaca cttttgcgca tccggacggt tacgcccgtt
    10021 ggcagcgcgc cgtggatatg gcggcgcagc tgggtgccga cgcgctgatc ctcgccgacc
    10081 tcgccatgct ggaatacgcc gccgagcgtt atccgaatat tgagcgccac gtatcggtgc
    10141 aggcttcggc gaccaatgaa gaggcgatta acttttatca tcgccatttt gacgttgccc
    10201 gcgtggtgct gccgcgcgtg ttgtcgattc atcaggtgaa acagctggca cgggtcacac
    10261 ctgtaccact ggaagtgttt gctttcggca gcctgtgcat tatgtcggaa ggccgttgct
    10321 atctgtcgtc gtatctgacg ggtgagtcgc ctaacaccgt gggcgcgtgt tctccggccc
    10381 gtttcgtgcg ctggcaacaa acgccgcagg ggctggaatc ccgcctgaac gaagtgctga
    10441 tcgaccgtta tcaggacggc gaaaacgcag gttatccgac gctgtgtaaa gggcgttatc
    10501 tggtggacgg cgagcgctat cacgcgctgg aagaaccaac cagtctcaat accctggaac
    10561 tgctgccgga gttaatggcg gcgaatattg cttcggtgaa aattgaaggc cgccagcgta
    10621 gcccggcgta tgtcagccag gtggcgaaag tctggcgtca ggctatcgac cgttgtaagg
    10681 ccgatccgca aagcgcgtgg atggagacgc tcgggtcgat gtccgaaggc acgcagacca
    10741 cccttggcgc gtatcaccgt aaatggcagt gagaagagca atgaaatatt ccttagggcc
    10801 agtgctgtgg tactggccaa aagagacgct ggaagatttt tatcagcagg ccgccaccag
    10861 cagcgccgac gtgatttatc ttggtgaagc ggtatgcagc aagcgccggg caaccaaagt
    10921 tggcgactgg ctggagatgg caaaatcgct cgccggaagt ggcaagcaga ttgtgctctc
    10981 cacgctggcg ctggtgcagg catcctctga actgggcgaa ctgaaacgct atgttgagaa
    11041 cggtgagttt ctgattgaag ccagcgatct cggcgtggtg aatatgtgcg ctgaacgcaa
    11101 actgccgttc gtcgccgggc acgcgctgaa ctgctacaac gcggtgacgc tgaaaatatt
    11161 gctcaaacag ggcatgatgc gctggtgtat gccggtggag ctttcccgcg actggctggt
    11221 gaatctgctt aatcagtgcg atgagctggg cattcgcaac cagtttgaag tggaagtcct
    11281 gagctacggt catctaccgc tggcctactc cgctcgctgc tttaccgcgc gttcggaaga
    11341 ccgcccgaaa gatgagtgtg aaacctgctg cattaagtat ccgaacgggc gcaacgtgct
    11401 gtcgcaggaa aaccaacaag tgtttgtact caatggcatt cagaccatga gcggctacgt
    11461 ttacaacctc ggtaacgagc tgacatccat gcagggattg gttgatgtgg tccgcctgtc
    11521 accgcagggt actgacactt tcgcgatgct cgacgccttc cgcgctaatg aaaatggcgc
    11581 tgcgccacta ttgttgacgg caaacagcga ctgtaacggc tactggcggc ggctggcagg
    11641 actggagctg caagcctaag taaatatgct cgtcatactt caagttgcat gtgctgcatc
    11701 tgcattcgtt caccccagtc acttacttat gtaagctcct ggagattcac tctcttgtcg
    11761 ccttcctgca actcgaatta tttagagcac agctcacttt gttaacaact ttaactactc
    11821 tttaatgcag tattaaagat taatcggtaa caaagtgagc tgttatgact gataaaacca
    11881 ttgcgttttc gctactcgat ctggccccca ttcccgaagg ttcttcagcg cgagaagcat
    11941 tctcccactc tctcgatctc gcccgtctgg ctgaaaagcg cggctatcat cgctactggc
    12001 tggcagaaca ccacaatatg actggcattg ccagtgctgc cacgtcggta ttgattggct
    12061 atctggcggc gaataccacc acgctgcatc tggggtctgg cggcgtgatg ttgcctaacc
    12121 actcaccgtt ggtcattgcc gaacagttcg gcacgctcaa tacactctat ccggggcgaa
    12181 tcgatttggg gctggggcgt gcgtcaggta gtgaccaacg gacaatgatg gcgctgcgtc
    12241 gccatatgag cggcgatatt gataatttcc cccgcgatgt cgcggagctg gtggactggt
    12301 ttgacgcccg cgatcccaat ccgcatgtgc gcccggtacc aggctatggc gagaaaatcc
    12361 ccgtgtggtt gttaggctcc agcctttaca gcgcgcaact ggcggcgcag cttggtctgc
    12421 cgttcgcgtt tgcctcacac ttcgcgccgg atatgttgtt ccaggcgctg catctttatc
    12481 gcagcaactt caaaccgtcg gcacgactgg aaaaaccata cgcgatggtg tgcatcaata
    12541 ttatcgccgc cgacagcaac cgcgatgccg aattcctgtt tacctcaatg cagcaagcct
    12601 ttgtgaagct gcgccgcggc gaaaccgggc aactgccgcc accgattcaa aatatggatc
    12661 agttctggtc gccgtccgaa cagtatggtg tgcagcaggc gctgagtatg tcgttggtag
    12721 gtgataaagc gaaagtgcgt catggcttgc agtcgatcct gcgcgaaacc gacgctgatg
    12781 agattatggt caacgggcag attttcgacc accaggcgcg gctgcattcg tttgagctgg
    12841 cgatggatgt taaggaagag ttgttgggat agtgtgtctt aacgcgggaa gccttatccg
    12901 agctggcaac gctgtcctac gtagacctga taagcgaagc gcatcaggca ttgtgtaggc
    12961 agcagaaatg ttggataagg caccgctgat tactgataca ccggcagtaa attaaagctc
    13021 gataaaatat gtaccaatgc gttgccgacg ccaaacacca gaatcagcgt aatcatcggc
    13081 ttgccgcccc agacgcggaa tttcgggctg ccaaagcgtt tacgcgatgc gcgggccagc
    13141 agtgccggaa caattgccgc ccagatggta gccgctaaac cagcataacc aatggcgtac
    13201 aggaatccat tcgggaacag cagaccaccc acaacaggcg gtgcaaaggt caacaatgct
    13261 gttttcaagc ggcccatagc cgagtcatcg aaaccaaaca gatctgccag atagtcaaac
    13321 aaacccagcg ttacgccaag gaacgaactc gctaccgcaa agtttgagaa cacgaccagc
    13381 agaaggtcca ggctacggct gttcagcacg ccgcttaatg cctgtaccag cacatcaata
    13441 ttaccgccct tctctgcaat accgataaac tccggacgcg ggatgttacc catcgtcgcc
    13501 agcaaccaga tggtatacag cgccagtgcc atcagcgtac cgtacaccag gcatttcacg
    13561 atggttttcg gatctttgcc gtaatacttc atcaggcttg gcacgttacc gtgataacca
    13621 aacgacgcca ggcagaacgg caatgtcatc agcagatacg gcgcataaga tgcattgctt
    13681 tctgcaacgt tgaacaatgt cgcaggctgc acatgcccca acaggctgcc aaaggtgagg
    13741 aagaaggtaa tgactttcgc ccccagcaca atcgccgtca tgcggctgac ggccttagta
    13801 ctcaaccaca ccacaaacgc taccagcagt gcaaaaccaa aacccgccgc ccgtgccggg
    13861 acgtttagcg acatctctgc gaaggtgtga tgcagaattg aaccactggc agaaatatag
    13921 gcataggtca ggatatagag cacaaaggca atggaaatac cgttgaccac gttccagcct
    13981 ttgcccagca aatctttggt gatggtgtca aaactcgaac cgattcggta attcaggtta
    14041 gcttccagaa tcatcaagcc ggaatgcagc atacagaacc aggtaaagat cagcgccgcc
    14101 attgaccaga aaaaccacgc cccggacatg accactggca gagaaaacat ccctgcgcca
    14161 ataatggtgc cgccgataat caccacgccg ccaagcagcg acggtgacgt ttgggtggtg
    14221 gttagtgttg ccatgagggc ttctctccag tgaaaaatag tgcgactgcg ttgttatgca
    14281 ttgcactgta ccagtacgcg agtacaaaag acagaaaaaa agccccgatg gtaaaaatcg
    14341 gggctgtata tattatttta cagattgtgt tcgctgttca gcgatgatta cgcatcacca
    14401 ccgaaacgac gacgaccggt agagtcatca cgacgcggag cgcggccttc acgacgttcg
    14461 ccgctaaaac gacgaccatc accacggcca ccttcacggc gttcaccgct gaagttacga
    14521 ccgccttcac gacgttcgcc accgaaacca cgaccaccgc cacgacgctc accgccagta
    14581 tgcggctgtg catcgcccag taactgcatg ttcatcggct tgttgagaat gcgagtgcgc
    14641 gtaaagtgtt gcagcacttc acccggcata cctttcggca gttcgatggt ggagtgagaa
    14701 gcaaacagct tgatgttacc aatgtaacgg ctgctgatgt cgccttcgtt agcaatcgca
    14761 ccaacgatat gacgaacttc aacaccatca tcacggccca cttcaatgcg gtacagctgc
    14821 atatcgccaa catcacgacg ttcacgacgc ggacgatctt cacggtcacc acgcgggcca
    14881 cggtcgttac gatcgcgcgg accacggtca tcacggtcac ggaattcacg tttcggacgc
    14941 atcggcgcat ctggcggtac gatcagagta cgttcaccct gtgccatttt cagcagtgcc
    15001 gcagccagag tttcgagatc cagctcttca ccttctgcag tcggctgaat tttgctcagc
    15061 agtgcgcggt attgatccag atcgctgctt tccagctgct gctgtacttt agcggcgaat
    15121 ttttccagac ggcgtttgcc cagcagttct gcgttcggca gttctacttc cggaatagtc
    15181 agcttcatag tacgttcaat gttgcgcagc agacgacgct cgcggttctc aacgaacagc
    15241 agcgcgcggc cagcacgacc cgcacgaccg gtacgaccga tacggtgaac gtaagactca
    15301 gaatccatcg ggatatcgta gttaactacc aggctgatac gctcaacgtc caggccacgg
    15361 gctgcaacgt cggtcgcaat caggatgtcc agacgaccat ctttcaggcg ttccagtgtc
    15421 tgttcacgca gcgcctggtt catgtcaccg ttcagcgcgg cgctgttgta gccgttacgc
    15481 tcaagagctt cagccacttc cagagtcgcg tttttggtac gaacgaagat aatcgccgca
    15541 tcaaaatctt ccgcttccag gaaacgtacc agtgcttcgt ttttgcgcat accccagaca
    15601 gtccagtagc tctggctgat gtcaggacgg gtagtcacgc tggactgaat gcgcacttcc
    15661 tgcggctctt tcataaagcg gcgggtaatg cgacgaatcg cttccggcat ggttgcagag
    15721 aacagagcgg tctgatgacc ttccgggatc tgcgccataa tggtttcaac gtcttcgatg
    15781 aagcccatgc gcagcatttc gtcagcttca tccagaacca gaccgctcag tttagagagg
    15841 tccagagtgc cacgtttcag gtggtccagc agacggcccg gagtaccgac aacgatctgc
    15901 ggcccctgac gcagggcgcg taattgcacg tcataacgct ggccgccgta cagagcaacc
    15961 acatttacgc cgcgcatgtg tttagagaaa tccgtcattg cttcagcaac ctgtaccgcc
    16021 agttcgcggg tcggtgccag caccagaatc tgtggtgctt tcagctcagg atcaagattc
    16081 tgcaacagag gtaaagagaa tgctgcagtt tttccgctcc ccgtctgggc catacccaga
    16141 acgtcgcggc cattcagcag atgtggaata cactctgcct gaattggaga tggtttttcg
    16201 taacccagat cgttaagggc ttcaaggata ggagccttca ggcccagatc tgcaaaagtg
    16261 gtttcgaatt cagccatgta gtacgtgtgc ctcaaaatta atggcggcca gtctacataa
    16321 ctcatcatga aattgatcag caattttcat tgaaaagtgt gaaccggctc aaagtaggtg
    16381 tattaacgaa caacaacgcc ctcacccgtt aaggtgatgg caatcaaaaa agattacggg
    16441 ctgatgtgta cgtcagctat tgctggtccg attctgccag gtcatcttgg tcctggccca
    16501 ggagcgataa ttccaacaat gcgtatcggt gctcaacaaa gttatgaacg ttgttgacaa
    16561 ccgccagttt gaacagggcc gtggcgctgt ccaaatcccc cagacttagg tagtacttac
    16621 ctaaatagaa gttggtttca ctgagatgct cagcgagcga ggtgttatcc gttgcgtccg
    16681 ccttgagcct ttccattaac gtttgttcgc taatgttgcc caggtagaac tcgacaatgt
    16741 tccatcccca ctgttcctta tccgattttt cgaagtgctg tttcaacact tctttagcct
    16801 gcttctcatc gagcttctgc tcggcgagat aaagccacag actacggaaa ggatcattgg
    16861 gatcgtcttg ataaaacgcc agcagatcat cttgcgctaa cttgtcacga ccgccgtaat
    16921 ataatgcgat cccgcgattc aagtgcgcgt agttgtaagt tggatcaagc tcaagtacag
    16981 aatcaaacgc ttcataggca gcatcaaaat tgcctgcctg cgttaaatat atgcctaagt
    17041 aattgaacac ttcaggcata tccggtcgga ttgccagcgc ttgcgaaaaa tcgttacgcg
    17101 ctaatgccct cagaccgaga ctatcataca acactccgcg ctcatataaa agctgtgcgc
    17161 gttcgtcatc ggttaaagcc cgactggcaa ggatttgttc catacgtgcc agaatcactt
    17221 cctgctgtaa agtcggttgc aatggtaccg cgaggacttc acttttacgc caggaagtat
    17281 tactgcatcc tgcaagcgta agtgctgtcg caacgaaaca ccagcgcaaa aaaggcttca
    17341 tttcccactc ccgaagacca cggttgaatg aacgtcctgt tcccggttgc taacaaggcg
    17401 tcctgcccgg ttaaaagccc cccgccgcag cggagggcaa atggcaacct tactcgccct
    17461 gttcagcagc cggagcttcc ggtgctgcag caggttgaga ctgctcagtc gcttctttaa
    17521 tgctcagacg gatacggccc tggcgatcaa cttccagaac tttcaccggt acttcctgac
    17581 ccatctgcag gtaatcggtc actttctcaa cgcgtttgtc agcgatttga gagatgtgga
    17641 ccagaccttc tttaccgccg ccgatggcaa caaatgcgcc aaagtcaacg atacgggtca
    17701 ctttaccagt gtagacgcgg cccacttcga tttctgcagt gatctcttcg atacgacgaa
    17761 tagcatgttt cgctttctcg ccgtcggtcg ctgcgatctt cacagtaccg tcatcttcga
    17821 tttcgatggt agtgccagtt tcgtcggtca gggcacggat aacagagccg cctttaccga
    17881 taacgtcttt gatcttgtcc gggttgatct tgatggtatg gatacgcggt gcgaactcag
    17941 agatatcgcc acgcggcgcg ttgatcgcct gttccattac gcccaggata tgcagacgcg
    18001 cacctttagc ctggttcagc gcaacctgca tgatctcttt ggtgatacct tcaattttga
    18061 tatccatctg caatgcagag ataccctcgc gggaacccgc aactttgaag tccatatcgc
    18121 ccaggtgatc ttcgtcgccc aaaatgtcag acagtacaac gtagttgtcg ccttctttca
    18181 ccagacccat tgcgataccc gcaacggcag ctttgatcgg cacacctgcg tccatcagcg
    18241 ccagagacgc gccgcacacg gaagccatag aagaggaacc gttggattca gtgatttcag
    18301 acacaacacg tacggtgtac gggaatttgt ccatatccgg catgactgcc agcacgccgc
    18361 gcttcgccag acgaccgtga ccaatttcac gacgcttcgg agaaccgacc atgccggttt
    18421 cgcctacgga gtacggaggg aagttgtagt ggaacaggaa ggtatcggta cgttcgccca
    18481 tcagttcatc aagaacctgc gcgtcacgag cagtacccag cgttgcggta accagcgcct
    18541 gcgtttcacc acgggtgaac agcgcagaac cgtgagtacg cggcagcacg ccagtacgca
    18601 catccagacc acggatcata tctttttcac gaccgtcgat acgcggttcg cctgccagta
    18661 cgcggctacg aacaacgttt ttctcgatag cgtgcagaat ttcacccagt tcgttttcgt
    18721 ccagggtttc gtcttcagca agcagcgtcg cgatggtttc agatttgatg acatcaacct
    18781 gcgcataacg ctcttgtttg tcggtgatgc ggtaagcatc gctcaggcga gcttcagcca
    18841 gtgcagcaac gcgcgcgttc agcgcttcgt ttaccggctc cggctgccag tcccaacgtg
    18901 gtttaccggc ttctttcacc agttcattga tgttctgaat aacaacctgc tgttgttcat
    18961 gaccgaacac tactgcgccc agcatctggt cttcgctcag cagttcagct tcagattcaa
    19021 ccatcagaac agcggcttca gtaccggcaa caaccagatc cagtttgctc tctttcagct
    19081 cgtcctgagt cgggttcagt acgtactggt cattgatgta acctacgcga gcagcaccaa
    19141 tcggaccatt gaacggaata ccagacagag acagtgctgc ggaagcacca atcatcgcga
    19201 cgatatccgg gttaacttgc gggttaacag aaaccacggt ggcgataacc tgaacttcgt
    19261 tgacgaagcc ttccgggaac agcgggcgaa tcgggcggtc aatcagacgc gcgatcaggg
    19321 tttcgccttc gcttggacga ccttcacgac ggaagaagct acccgggata cgaccagcag
    19381 cgtaggtacg ctcctgatag ttaacggtca gtgggaagaa gtcctgacct ggtttggctt
    19441 ttttctggcc aacaacggta acaaataccg cggtgtcatc catgctaacc ataacagcgg
    19501 cagtagcctg acgagccatc atgccggttt ccagagtcac ggtgtgttgg ccgtactgga
    19561 atttacgaac gatcggatta agcaatgtaa tatcctttct ctttcttaga cagtacctta
    19621 cggcactggt gttaataccc gatcttctgc gcatcctcgc gactaatgac aaccctaacc
    19681 cagctctatg tgggtaaagc ctctcattag ccgcgcgaac ctctgcaacg gaagatcatt
    19741 catagcaaca atacattagt ttccagtgaa ttgctgccgt cagcttgaaa aaaggggcca
    19801 ctcaggcccc cttttctgaa actcgcagga attagcgacg cagacccagg cgctcgatga
    19861 gctgggtgta acgtgctacg tctttacgtt tcaggtagtc gagcagttta cgacgctgag
    19921 aaaccatgcg cagcagacca cgacggctgt ggtgatcttt tttgtgctct gcaaagtggc
    19981 cctgcaggtg gttgatctgt gcagtcagca gtgctacctg aacttcggta gaaccggtgt
    20041 cgtttgcgtc acgaccaaac tcagaaacga ttttagctgt tgcttcagta cttagagaca
    20101 ttttaaaact ccaaagtata tagaatgaaa ggacgccgat ctctaattca gcgatcccag
    20161 tgtacgttac gcaaagtgtt aaacaattta cgcgacgtta agcggcagta ttctactcgt
    20221 agcgacctgt tatcgcaaga cggttaacat tacgccgggt attcaaccac caggcgacga
    20281 ggcgcgacgc ggccttcatc gtcaatttcg cccataccga taaacttgcc gttctcacct
    20341 tctgtaacgc gaaccagtcc ttccagcggc gcaccggatg tacgaactgg gttaccattt
    20401 ttgaagtaaa cagaagacgt taacggaaga ttcaccaccg ggtagtccga agctggactg
    20461 tccattggca tcagtaatgg atcaagtaac tccgcagccg gaatatcctg ctgttcggct
    20521 tgttcgacca gttcacgcag atgttccagg gtcaccatcc gttcaaccgg atatttactt
    20581 accgccagac gacgcaggta aataacatgc gcgccacaac cgagtttttc acccaggtca
    20641 tcaatgatgg tgcggatata agtgcctttt gagcagtgaa tttccagctc cagctcattg
    20701 ccttcgtggc gaataaacag caattcataa acggtaatcg ggcgcgcttc acgcggtact
    20761 tcaatgccct gacgcgcata ttcgtacagt tttttaccct gatatttcag tgctgaatac
    20821 atcgaaggga tctgttcgat atcgccacgg aaagtatcca gcgccgccgc cagttgctct
    20881 gcgctaaagg ttaccggacg ttcttcaacg atttgtccgt cggcatcaga agtatcggta
    20941 cgctgtccaa gacgcgcaat gacccgatag cgtttgtcgg agtccagcag atactgggaa
    21001 aacttcgtcg cttccccgaa gcaaattggc aacatgccag ttgccagcgg gtccagagca
    21061 ccggtatgcc cggcacggtt ggcgttataa atccgtttca ctttttgcag cgcatcattg
    21121 ctggacatac cctgcggttt atccagcaac aaaacgccgt taatgtcgcg accgcgacga
    21181 cgaggacgac tcattagtcc tccttgctgt cgtccgggtt aacacgacgt tcttcgtcat
    21241 gtttgaccac gctggtcacc aggtttgaca tgcgcatccc ttcaaccaga gagttgtcgt
    21301 agaagaaggt cagttccggc acgatacgca ggcgcatcgc tttccccagc aggctgcgga
    21361 tgaaaccaga agcttcttgc aacgctttga tgcccgcttt aaccgcgtct tcatctttgt
    21421 cgttgaggaa cgtcacatat actttggcat acgccaggtc gcgagacatt tcgacaccgg
    21481 aaacggtggt catcatgccc aggcgaggat ctttaatttc acgctgcagg atgagagcga
    21541 tctctttttg catttcctgc gctacgcgct gcgggcgacc aaattctttc gccataataa
    21601 attctcctga caaaaaaggg gctgttagcc cctttttaaa attaatttca ggtggaaggg
    21661 ctgttcacgt tggcctgata agacgcgcca gcgtcacatc aggcaatcca tgccggatgc
    21721 ggcgtaaacg ccttatcccg catggaaccc taaaaacctt aagcgatggt acgttggatc
    21781 tcgatgattt cgaatacttc gatcacatcg ccagtgcgga cgtcgttgta gttcttaacg
    21841 ccgataccac attccatacc gttacggact tcgttaacgt catctttgaa gcggcgcagg
    21901 gactccagct cgccttcgta gataaccacg ttgtcacgca gaacgcggat cgggttgtga
    21961 cgtttaacca caccttcggt aaccatacag cctgcgatgg caccaaattt cggcgatttg
    22021 aacacgtcac gaacttccgc cagaccgata atctgctgtt tcagttccgg agacagcata
    22081 ccgctcatcg ccgctttcac ttcgtcaatc aggttataga tgacggagta gtaacgcaga
    22141 tccaggcttt ccgcttcaat cactttacgt gcagaggcat cagcacgtac gttgaagcca
    22201 accaggatgg cgttggacgc cgcagccagg gtggcgtcgg tttcggtgat accacctacg
    22261 ccagaaccga tgatcttcac tttaacttcg tcagtagaca gtttcagcaa ggagtcggag
    22321 atcgcttcca cagaaccctg tacgtctgcc ttcaggacga tgttcacttc gtgaacttcg
    22381 ccttcggtca tgttggcgaa catgttctcg agtttagatt tctgctgacg cgccagttta
    22441 acttcgcgga atttaccctg acgatacagt gcaacttcac gcgctttctt ctcgtcacgt
    22501 acaacggtaa cttcatcacc cgcagccggt acgccggaca ggccgaggat ttccaccgga
    22561 atggacggac ccgcttccag cacttcctga cccagttcgt tacgcatcgc acgaacacga
    22621 ccgtattcga agccacacag aacgatatcg cccttgtgca gagtaccttc acgtaccaga
    22681 acggtagcaa ccggaccacg acctttatcg aggaaggatt cgataaccgc accgctcgcc
    22741 atacctttac gtaccgcttt cagctccaga acttccgcct gcagcaggat agcgtccagc
    22801 agttcatcga tgccggtacc cgctttcgca gatacgtgta cgaactggct ttcaccgccc
    22861 cactcttctg gcaggatgcc atactgggag agttcgttct taacacgatc cggatcggct
    22921 tctggtttat caatcttgtt cactgcaacc accaccggta cctgcgccgc tttcgcgtgc
    22981 tggattgctt cgatggtctg cggcatcacg ccgtcgtcgg cagcaacaac caggactacg
    23041 atgtccgttg cctgcgcacc acgagcacgc attgaagtaa acgcggcgtg ccctggggtg
    23101 tccaggaagg tgatcatgcc gttttcagtt tcaacgtggt atgcaccaat gtgctgggta
    23161 atgccgcccg cttcgccaga ggccactttc gttgaacgaa tgtagtccag cagagaggtt
    23221 ttaccgtggt caacgtgacc catgatggtc acaaccggcg cgcgcggttc agccgcagcc
    23281 cccgtgtcac ggtcgctcat taccgcctct tccagctcgt tttcacgacg caggataact
    23341 ttgtggccca tctcttcagc aaccagctgt gcggtttcct gatcgataac ctggttgatg
    23401 gttgccattg cgcccagttt catcatcgct ttgatgacct gagagccttt aaccgccatc
    23461 ttgttcgcca gttcgccaac ggtgatggtt tcgccgatca caacgtcacg gttaacggcc
    23521 tgagctggct tctggaagcc ttgctgcagg gaagaacctt tacgttttcc gcctttacct
    23581 ccacgtactg ctgcgcgagc ttcttcacga tcagcttttg attcagcgtg tttgttgcct
    23641 ttcttcggac gcgctgcttt cgcgttacga ccacggccac ggccgccttc gacttcacga
    23701 tcgctttcgt cttctgcctg gcgagcatgt tgagaagtag tgacgtgata atcgctggaa
    23761 tcttcagtcg gttccgcgtt atcagtccat ttgttttctt ccgccatacg acgtgcttct
    23821 tcagcaacgc gacgtgcttc ttcttcgagt ttacgacgcg cttcttcttc agctttacgc
    23881 ttgagctctg cagcttcctg ctcacggcgg gctttttcag cctgggcgtt tttagtcata
    23941 tcgtcttgtt gattgctcac tttgtctttt tccgcagctt cacgtttcgc ttgttcagca
    24001 gcttcacgct tagcttgttc tgcggcctca cgttcagctt tttgttgcgc ctcgcgttta
    24061 gccgattctt ctgcctcacg acgggcttgc tcttccgctt cacgctgcgc ttgctcttcc
    24121 gctgcaaggc gttcagcctc ttgcggatcg cgtttcacaa aggtgcgttt cttgcggact
    24181 tcgatttgta ccgatttgct ttttccaccg gtaccaggaa tgttaagggt gctgcgtgtt
    24241 ttacgttgca gcgtcaattt gtccgggcct gaatttttct gattcaggtg gtcaatcaaa
    24301 gtctgtttct cttttgcgga cacagagtcg tcagcagact tccggatacc tgcatcagca
    24361 aattgctgta ccaggcgttc cacggaggtc tgtcgctctg cggccagcgt tttaatcgtt
    24421 acatctgtca tgctgttcct tcctgctaca gtttattacg cttcgtcacc gaaccagcaa
    24481 atattacggg cagccataat cagtgctccg gctttttcgt cggtcacccc ttcgatatca
    24541 gccagatcat caatgccctg ttcggcgaga tcttccagcg tacaaacgcc acgggcggcc
    24601 agtttgaatg ccaaatcacg atctatccct tcaaggttca gcagatcgtc agccggtttg
    24661 ttatcaccga ggctttcttc ctgggcctgt gcaatggtgg ccagtgcatt tttagcacgc
    24721 tcgcgcagtg cttcaacggt cggctcatca aggccttcga tttccaacag ctctttcatc
    24781 ggcacatagg ccagttcttc cagcgtcgag aagccttctt ctaccagaac agtcgcgaag
    24841 tcttcgtcga tgtcgagata tttggtgaag gtgtcgatcg ctgcgtgcgc ttccgcctga
    24901 tgcttagcct gcaggtcgtc aacggtcatc acgttgagtt cccaaccgct cagctgcgaa
    24961 gccagacgca cgttctgacc gttacggcca atcgcctgcg ccaggttacc ggcttcaacg
    25021 gcgatatcca tggtgtgttt atcttcatcc accacgatag aagcaacgtc tgccggtgcc
    25081 attgcgttaa tcacaaactg cgccgggtta tcatcccaca ggacgatatc gatacgctcg
    25141 ccgcccagtt cagtagaaac cgcctgaaca cgcgcgccac gcatacctac acaggcacct
    25201 accggatcga tacgtttatc gttggttttc accgcgattt tcgcacgaga acccggatcg
    25261 cgagccgctg ctttaatttc aatcacttct tcgccgattt ctggcacttc aatacggaac
    25321 agttcgatca gcatttccgg cttggaacga gtgacgaaca gttgcgcgcc acgcgcttcc
    25381 gggcgaacgg aatagagcac gccacgaacg cggtcgccag ggcggaagtt ttcacgcggc
    25441 agcatatctt cgcgcaggat cacggcttca gcattgttgc ccagctccag agagatgttg
    25501 tcgcggttta cttttttcac cacgccggtg atgatttcac cttcgtgttc acggaactga
    25561 tcaaccacca tcgcacgttc ggcttcacgc actttctgca cgataacctg ttttgccgtc
    25621 tgggtagtga tacggtcaaa ggtaacagac tcaatctgat cttcaacgta atcgcccagg
    25681 ttcaggcttt catcttcata acgtgcggct tcaagggtga tttccttggt cggctgggtg
    25741 acttcatcaa caactaacca gcgacggaag gtgtcaaaat caccgctttt gcgatcgatc
    25801 tgtacgcgga cgtcgatctc ttgttcatat tttttctttg ttgctgtcgc cagcgcgctt
    25861 tccaatgctt cgaaaatctt ctcgcgaggt agcgcctttt cattggatac ggcttcaact
    25921 acagccaaaa tttctttgtt catcgcgggc ttttcacctc atccagacta ttaaaagtgg
    25981 ggaaccaggt tcgccttctg gatattactc agcgcgaaca cttcatcttt accttcgacg
    26041 gtaactgtga tcatttcacc gtctaccgct ttgataacgc cctgccattt acgacggttt
    26101 tgtaccgcca tacggagaac cagagtcacc tcttctccga caaaacgggc gtagtgttca
    26161 gccgtgaaca gtgggcgatc gagacccggt gaggagactt ccaggttata agcaacggtg
    26221 atgggatctt caacatccag cacagcactt acctggtggc tcacatcagc acaatcatca
    26281 acattgatgc catcttcact atcaatatag atgcgcagtg tggatgtgcg accgcgaata
    26341 aattcgatgc caaccagttc aaaacccagg gcctcaactg gcgcagtaat catctctgtt
    26401 aatttttgct ctaatgtgga caagcccacc cccaagacat aaaaaaaggg cctaaagccc
    26461 agttattctg tagtcagata acaaaaaacc ccgataaatc ggggctttat ataactgaac
    26521 cctataaccg caactgcggt ctggagcact ttccagaagg attttttcaa atcccactac
    26581 gaaggccgaa gtcttcacag tatatttgaa aaaggactct aagggaaagt ggttgcgggg
    26641 gccggatttg aaccgacgac cttcgggtta tgagcccgac gagctaccag gctgctccac
    26701 cccgcgcctg aaacgcggca aattctactc gttttgggta aaagatgcaa atactgctgg
    26761 gatttggtgt accgagacgg gacgtaaaat ctgcaggcat tatagtgatc catgccacat
    26821 tttgtcaacg tttattgcta atcacgtgaa tgaatatcca gttcactttc atttgttgaa
    26881 tacttttgcc ttctcctgct ctcccttaag cgcattattt tacaaaaaac acactaaact
    26941 cttcctgtct ccgataaaag atgattaaat gaaaactcat ttattttgca taaaaattca
    27001 gtgagagcgg aaatccaggc tcatcatcag ttaattaagc agggtgttat tttatgacga
    27061 cgattctcaa gcatctcccg gtaggtcaac gtattggtat cgctttttct ggcggtctgg
    27121 acaccagtgc cgcactgctg tggatgcgac aaaagggagc ggttccttat gcatatactg
    27181 caaacctagg ccagccagac gaagaggatt atgatgcgat ccctcgtcgt gccatggaat
    27241 acggcgcgga gaacgcacgt ctgatcgact gccgcaaaca actggtggcc gaaggtattg
    27301 ccgctattca gtgtggcgca tttcataaca ccaccggcgg cctgacctat ttcaacacga
    27361 cgccgctggg ccgcgccgtg actggtacca tgctggttgc tgcgatgaaa gaagatggcg
    27421 tgaatatctg gggtgacggt agcacctata aaggaaacga tatcgaacgt ttctatcgtt
    27481 atggtctgct gaccaatgct gaactgcaga tttacaaacc gtggcttgat actgacttta
    27541 ttgatgaact gggcggccgt catgagatgt ctgaatttat gattgcctgc ggtttcgact
    27601 acaaaatgtc tgtcgaaaaa gcctactcca cagactccaa catgcttggt gcaacgcatg
    27661 aagcgaagga tctggaatac ctcaactcca gcgtcaaaat cgtcaacccg attatgggcg
    27721 tgaaattctg ggatgagagc gtgaagatcc cggcagaaga agtcacagta cgctttgagc
    27781 aaggtcatcc ggtggcgctg aacggtaaaa cctttagcaa cgacgtagaa atgatgctgg
    27841 aagctaaccg catcggcggt cgtcacggcc tgggcatgag cgaccagatt gagaaccgta
    27901 tcatcgaagc gaaaagccgt ggtatttacg aagctccggg gatggcactg ctgcacattg
    27961 cgtatgaacg tctgttgacc ggtattcaca acgaagacac cattgagcag tatcacgcgc
    28021 atggtcgtca gttgggccgt ctactgtacc aggggcgttg gtttgactcc caggcgctga
    28081 tgctgcgtga ctctctgcaa cgctgggttg ccagccagat cactggtgaa gttaccctgg
    28141 agctgcgccg tgggaacgat tattcaatcc tgaataccgt ctcagagaac ctgacctaca
    28201 agccagagcg tctgacgatg gaaaaaggcg actcggtgtt ctcgccagat gatcgtattg
    28261 gtcaattgac catgcgtaat ctggatatca ctgatacccg agagaaactt tttggttatg
    28321 ccaaaactgg cctgctctcc tcctctgcca cttcaggcgt gccgcaggtg gagaatatgg
    28381 aaaacaaagg ccagtaattc gacatcaacc ctgcccttca gggggggggt taccttgctt
    28441 atcctctgta aactcctttc tgaacatcac ataatcgaaa acatcatggt ttgcatccac
    28501 aacccgtgag tctcctttat agtgtgcaat cacttcctca agcgtttgcg gctgttccgg
    28561 ctttgttacc cccatccacg cattaataag gtaattattg taagctgtcg aaaagatgtt
    28621 gttttccgtt gtgcgatcca cgccatcccc aagaacgggg ctataccaga taaacatcgg
    28681 gacatgatat gcctgctggc tagcctccct gcctccatga aaatagacgt tcttcttcgt
    28741 agggtcacgt tccaggccgt ggtcggcaaa atacatgacc gaggcgcggc gatcttttaa
    28801 taattcaaaa acctgaccta gcaaactatc tgtgtaatga atggagttgt catagcaggc
    28861 atcctgatcg tcctgcggtt gaaacacggc gctggattgc ggataggcgc tacaagccgg
    28921 ttcatggctt ccatttaaat gaagaacaat cagtttcttt tgctgcgtat tttgctgtaa
    28981 tgcttgcgat aaatgcggca acaacaattc atcaaatcct ctgacataaa ctgtttccat
    29041 ggcgcgcatg gcgatactgg taactgctgt accattctgc cgaaaagcgg attgcgagct
    29101 tagccagaaa gtctgaaatc ctgcttgatt agccatatta ataatgttgt cggggtaatt
    29161 atgaatgtca tgactcaaaa cagaatcagc agttaaagaa aggggaaccg acagcgcagt
    29221 gtaaggtgcg ccgcttattg cttgattaaa cagtttgatc tgttttcttt gtgcttcaac
    29281 ttgcggtgtc gtagagcgtg tatatccata caaagacata ttgtcgacac gtacagactc
    29341 ccccacaatc aacacgtagg tatcaatacc tgtatccctg actgataatt gaaaatacgg
    29401 caccgtgttt gcaattgaga gtaa
//
LOCUS       DADMHC010000030        29306 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.030, whole genome shotgun sequence.
ACCESSION   DADMHC010000030 DADMHC010000000
VERSION     DADMHC010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29306)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29306)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29306
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.030"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            285..1943
                     /locus_tag="JNZ57_001103"
     CDS             285..1943
                     /locus_tag="JNZ57_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent endonuclease"
                     /protein_id="HAY8827398.1"
                     /translation="MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTL
                     LLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP
                     CTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR
                     DARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH
                     YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQA
                     KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVE
                     HVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV
                     INELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATV
                     RSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRVAQIPENVPMNLRKIISKAI
                     HRSSKPDLAIEVAIEAGRRGVDSVPTLLKKMFSRVLWLARGRAD"
     gene            complement(1940..2896)
                     /locus_tag="JNZ57_001104"
     CDS             complement(1940..2896)
                     /locus_tag="JNZ57_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001322270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF535 domain-containing protein"
                     /protein_id="HAY8827399.1"
                     /translation="MNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQ
                     KFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEAL
                     RYHYALLRGCMSAEEFSLYLNTPGMQLAKLEGKNGEQFTLELTMMISMDKEGDSTILF
                     RNSEGIPLAEITFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVM
                     EAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHY
                     RLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFRG"
     gene            3047..4162
                     /gene="macA"
                     /locus_tag="JNZ57_001105"
     CDS             3047..4162
                     /gene="macA"
                     /locus_tag="JNZ57_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308991.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrolide transporter subunit MacA"
                     /protein_id="HAY8827400.1"
                     /translation="MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPG
                     DLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIK
                     EVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQI
                     GTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA
                     DMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYY
                     ARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETR
                     EREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ"
     gene            4159..6105
                     /gene="macB"
                     /locus_tag="JNZ57_001106"
     CDS             4159..6105
                     /gene="macB"
                     /locus_tag="JNZ57_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrolide ABC transporter ATP-binding
                     protein/permease MacB"
                     /protein_id="HAY8827401.1"
                     /translation="MTPLLELKDIRRSYPAGDEQVEVLKGITLDIYAGEMVAIVGASG
                     SGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLT
                     AEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALM
                     NGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRD
                     GEIVRNPPAIEKVNVAGGTEPVVNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTM
                     LGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYD
                     DLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQ
                     EQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVL
                     RVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMD
                     GVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARAS
                     DVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTAT
                     GILFGWLPARNAARLDPVDALARE"
     gene            complement(6178..6402)
                     /gene="cspD"
                     /locus_tag="JNZ57_001107"
     CDS             complement(6178..6402)
                     /gene="cspD"
                     /locus_tag="JNZ57_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock-like protein CspD"
                     /protein_id="HAY8827402.1"
                     /translation="MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKA
                     GQSVQFDVHQGPKGNHASVIVPVEVEAAVA"
     gene            6725..7045
                     /gene="clpS"
                     /locus_tag="JNZ57_001108"
     CDS             6725..7045
                     /gene="clpS"
                     /locus_tag="JNZ57_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HAY8827403.1"
                     /translation="MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVI
                     DVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCT
                     LEKA"
     gene            7076..9352
                     /gene="clpA"
                     /locus_tag="JNZ57_001109"
     CDS             7076..9352
                     /gene="clpA"
                     /locus_tag="JNZ57_001109"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HAY8827404.1"
                     /translation="MLNQELELSLNMAFARAREHRQEFMTVEHLLLALLSNPSAREAL
                     EACSVDLVALCQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNE
                     VTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE
                     EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV
                     GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ
                     DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKD
                     RALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDR
                     HLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLK
                     NLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL
                     SKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI
                     EKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN
                     STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV
                     SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVERDKEKN
                     ELTYGFQSAQKHKAEAAH"
     gene            complement(9696..9783)
                     /locus_tag="JNZ57_001110"
     tRNA            complement(9696..9783)
                     /locus_tag="JNZ57_001110"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9747..9749),aa:Ser,seq:gga)
     gene            complement(10037..10255)
                     /gene="infA"
                     /locus_tag="JNZ57_001111"
     CDS             complement(10037..10255)
                     /gene="infA"
                     /locus_tag="JNZ57_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001040186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HAY8827405.1"
                     /translation="MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNY
                     IRILTGDKVTVELTPYDLSKGRIVFRSR"
     gene            complement(10540..11244)
                     /gene="aat"
                     /locus_tag="JNZ57_001112"
     CDS             complement(10540..11244)
                     /gene="aat"
                     /locus_tag="JNZ57_001112"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HAY8827406.1"
                     /translation="MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQR
                     GIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGC
                     ASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFS
                     RMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGR
                     LPNNFWVPRCLFSPQE"
     gene            complement(11286..13007)
                     /gene="cydC"
                     /locus_tag="JNZ57_001113"
     CDS             complement(11286..13007)
                     /gene="cydC"
                     /locus_tag="JNZ57_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter ATP-binding
                     protein/permease CydC"
                     /protein_id="HAY8827407.1"
                     /translation="MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLS
                     ASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSK
                     LLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMMVTIGLSFLDF
                     TLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGA
                     SDRYRTQLENTEIQWLEAQRRQSELTALSQVIMLLIGALAVILMLWMASGGVGGNAQP
                     GALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPEVTFPDTQTRVA
                     DRVSLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDP
                     QQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALAESL
                     RRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDAT
                     TESQILELLAEMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRY
                     YQFKQGL"
     gene            complement(13008..14774)
                     /gene="cydD"
                     /locus_tag="JNZ57_001114"
     CDS             complement(13008..14774)
                     /gene="cydD"
                     /locus_tag="JNZ57_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter
                     permease/ATP-binding protein CydD"
                     /protein_id="HAY8827408.1"
                     /translation="MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWF
                     MARILQHMIMENIPREALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQV
                     LDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFP
                     SNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIF
                     GRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGEL
                     DFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAH
                     PQRGEVELASTDPVTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSL
                     LNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDA
                     SEHELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARVLLNPCSLLL
                     LDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGRIIEQGR
                     YAELSVAGGPFATLLAHRQEEI"
     gene            complement(14897..15862)
                     /gene="trxB"
                     /locus_tag="JNZ57_001115"
     CDS             complement(14897..15862)
                     /gene="trxB"
                     /locus_tag="JNZ57_001115"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HAY8827409.1"
                     /translation="MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQL
                     TTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNG
                     EYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVE
                     EALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRMLEEVTGDQMGV
                     TGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQ
                     TSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK"
     gene            16407..16901
                     /gene="lrp"
                     /locus_tag="JNZ57_001116"
     CDS             16407..16901
                     /gene="lrp"
                     /locus_tag="JNZ57_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001591745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-responsive transcriptional regulator
                     Lrp"
                     /protein_id="HAY8827410.1"
                     /translation="MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTP
                     CLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEE
                     IQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLV
                     IKTR"
     gene            17036..21007
                     /gene="ftsK"
                     /locus_tag="JNZ57_001117"
     CDS             17036..21007
                     /gene="ftsK"
                     /locus_tag="JNZ57_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HAY8827411.1"
                     /translation="MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSF
                     NPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWCHQS
                     SDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHS
                     SGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYE
                     DDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDEE
                     EIIYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWA
                     APVEPVTQTPPVTSVDVPPSQPTVAWQPVPGPQTGEPVIAPAPEGYPQQPQYAQPAVQ
                     YNEPLQQPYYAPAAEQPVQQPYYATAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTF
                     APQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEEVEE
                     KRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKAT
                     LATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQ
                     RAAEEKAREARRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNA
                     EDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFT
                     PIVEPVQQPQQLVAPQQQYQQPQLPVAPQQQYQQPQQPVAPQQQYQQPQQQVAPQPQY
                     QQPQQPVAPQQQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALE
                     QMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTV
                     AVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVV
                     ADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIP
                     HLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPD
                     PYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHL
                     VLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPN
                     STLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGAEELDPL
                     FDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPP
                     PFD"
     gene            21162..21773
                     /gene="lolA"
                     /locus_tag="JNZ57_001118"
     CDS             21162..21773
                     /gene="lolA"
                     /locus_tag="JNZ57_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010354356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HAY8827412.1"
                     /translation="MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQK
                     VTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWL
                     KDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQ
                     FSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK"
     gene            21784..23127
                     /locus_tag="JNZ57_001119"
     CDS             21784..23127
                     /locus_tag="JNZ57_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HAY8827413.1"
                     /translation="MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRA
                     IEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR
                     NAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVY
                     LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMM
                     ADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALY
                     WYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIA
                     QAIVYLACAPKSNAVYTAFKAALADVRERPDYDVPVHLRNAPTKLMKEMGYGQEYRYA
                     HDEANAYAAGEVYFPREIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR"
     gene            23218..24510
                     /gene="serS"
                     /locus_tag="JNZ57_001120"
     CDS             23218..24510
                     /gene="serS"
                     /locus_tag="JNZ57_001120"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000887397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HAY8827414.1"
                     /translation="MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKT
                     ENLQAERNSRSKSIGQAKARGEDIESLRLEVNKLGEELDAAKAELDALQAEIRDIALT
                     IPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGS
                     RFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLF
                     HTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGR
                     DTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMG
                     FGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSG
                     LAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG"
     gene            24749..27193
                     /gene="dmsA"
                     /locus_tag="JNZ57_001121"
                     /pseudo
     CDS             24749..27193
                     /gene="dmsA"
                     /locus_tag="JNZ57_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415414.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit A"
     gene            27204..27821
                     /gene="dmsB"
                     /locus_tag="JNZ57_001122"
     CDS             27204..27821
                     /gene="dmsB"
                     /locus_tag="JNZ57_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit B"
                     /protein_id="HAY8827415.1"
                     /translation="MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPEVSFRRIYEYAG
                     GDWQEDNGVWHQNVFAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGC
                     RYCHMACPYGAPQYNETKGHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDELRK
                     KHGDLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPKEV"
     gene            27823..28686
                     /locus_tag="JNZ57_001123"
     CDS             27823..28686
                     /locus_tag="JNZ57_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit"
                     /protein_id="HAY8827416.1"
                     /translation="MGSGWHEWPLMIFTVFGQCVAGGFIVLALALLKGDLRAEAQQRV
                     IACMFGLWVLMGIGFIASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGW
                     LLAMLKKLSPALRTLWLIVTMVLGVIFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMF
                     MGGPLLGYLLLSLAGVDGWAMRLLPAISVLALVVSGVVSVMQGAELATIHSSVQQAAA
                     LVPDYGALMSWRIVLLAVALCLWIAPQLKGYQPAVPLLSVSFILLLAGELIGRGVFYG
                     LHMTVGMAVAS"
     gene            complement(28721..29302)
                     /locus_tag="JNZ57_001124"
                     /pseudo
     CDS             complement(28721..29302)
                     /locus_tag="JNZ57_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005135793.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
BASE COUNT         7261 a         7211 c         7913 g         6921 t
ORIGIN      
        1 tgatttaggg caacagcggg ttgccccata tagtcatttg tctgattgac agtgtagtgc
       61 acgcaaaaga tttaatcctt taggcgtaat aaaaaataat atatcatgct aattatttga
      121 ttttgttgtt tttgcagact tatcagcaag agggagtata acgcgattat tcgctcattt
      181 ttcagacatt tgccatgctt aaatgtgatg tcatcacgta ttagcaaggc ctttcccgtt
      241 atactgccag cgtaaaggat aagtcacata tttctggagg ggatatgatt cttgagcgcg
      301 ttgaaattgt gggttttcgc ggtatcaacc gtttgtcgtt gatgctggaa caaaacaacg
      361 tcctgattgg ggagaacgcg tggggtaaat ccagcttgct ggacgcctta accctgctgc
      421 tatcgccaga atcagatctc taccattttg agcgcgacga tttctggttc ccgccgggag
      481 atatcaacgg gcgagaacat catctgcata ttattttgac cttccgcgaa tcgctgccag
      541 gccgacatcg ggttcgccgt tatcggccgc tggaagcgtg ctggacgcca tgcaccgatg
      601 gctatcaccg tattttttat cgtctggaag gggagagtgc ggaagacggc agcgtgatga
      661 cactgcgcag ttttctcgat aaagacggac atccgattga tgtcgaggat attaacgatc
      721 aggcacgcca tctggtgcgt ttaatgccgg tgctgcgctt gcgtgatgcc cgttttatgc
      781 gccgtattcg taacggcacg gtgccaaatg tccctaatgt ggaagtcacc gcgcgccagc
      841 tcgatttcct cgcccgtgag ttatcctcac atccgcaaaa tctctctgat gggcagattc
      901 gtcagggact ttccgcaatg gtacagctgc ttgagcatta tttctctgag cagggggccg
      961 gacaggcgcg atatcgttta atgcggcggc gggccagcaa tgagcaacga agctggcgct
     1021 atctggacat catcaaccgg atgattgacc gacctggagg gcgctcgtat cgggttattt
     1081 tgctcggcct gtttgctact ttattgcagg caaaaggcac attgagactg gataaagacg
     1141 cgcgtccatt gttgctgatc gaagatccag aaacccgttt acaccccatt atgctttcag
     1201 ttgcctggca tctgttgaat cttctgccat tgcagcgcat tgccaccacc aactcgggtg
     1261 agttgctttc gttaacgccg gtagagcatg tttgccgact ggtacgtgag tcctcgcgcg
     1321 ttgccgcctg gcgtctgggg ccgagtggct tgagtaccga agatagccga cgcatatcct
     1381 ttcacattcg ttttaaccgt ccgtcatcgc tgtttgcacg ctgctggttg ctggtggaag
     1441 gggaaacgga aacctgggtt atcaatgaac tggcgcgtca gtgcggacat cattttgatg
     1501 ccgaagggat caaggtcatt gagtttgccc agtccgggct aaagccactg gttaaatttg
     1561 cccgccgaat ggggattgaa tggcatgtac tggtcgatgg cgatgaagca gggaagaaat
     1621 atgccgctac ggtacgcagc ctgttgaata acgatcggga agccgaacga gaacatttaa
     1681 cggcgttacc ggcgctggat atggaacatt ttatgtatcg ccagggattt tccgatgtgt
     1741 tccaccgcgt ggcgcaaatc ccggaaaatg taccgatgaa tctacgcaaa attatctcga
     1801 aagcgatcca tcgctcttcc aaacccgatc ttgccattga agtggcaata gaggcaggac
     1861 gtcgtggtgt ggactccgta ccgacgctgc tgaaaaaaat gttctcacgc gtgctgtggc
     1921 tggcgcgcgg tcgcgcggat taaccgcgaa acatcgtggc catttgtggc tgaatagcgt
     1981 cgagcatctc atagcgccga cggtattcag cccgtttttt actggcgatt tcggcaatct
     2041 cttttcgtgc tatctgtgct ggaaggcggt aatggcgttc agcatcacat acgccgccaa
     2101 ccgattccca gaaagcgttg taatcagcgt ggatcttgcc ttctttatcg cgataacgca
     2161 ggctgcggta aatatgcgtt tcattgctga cggcaataat ctgctctacc tgcaaacgtt
     2221 gggcaaacag acaggccgct tccatcacga ggcgtttggg aaatagcccg tggcaggctt
     2281 tcgtcgcatt ctggatttcc tgatgtggaa tttcccattt tgcgccttgc agtccgccaa
     2341 taaacatcgt tcttttcccc tgatattcac acagggtaaa cgtgatctct gccagaggaa
     2401 taccttcgct gttgcgaaac aggattgtgc tgtcaccttc tttatccatt gagatcatca
     2461 tggtcagctc aagcgtgaac tgctcgccgt ttttgccttc cagcttcgcc agttgcatcc
     2521 cgggggtatt caaatataag ctgaattctt ccgccgacat acatccgcgg agtaacgcat
     2581 aatggtaacg taacgcctcc agcaattgct tacggctaag attcgccgca aggtaagggc
     2641 gatgcagacg cacaggcagt cgcggctggc gcgttaacaa cacattgaga ttaggccagt
     2701 gggaaagttc gttcatccac tcaacgctta aacgcggcat aatcaacgag cgcagcaaaa
     2761 atttctggcg aaaactacgg cgatgccaga atttacccgg ccgacactgt ccacgtgcca
     2821 gactaagaaa aagtgacagg ctgctgagag attcagatgg cgtaaaggtc cgttcagtta
     2881 gctgcgacat attcatgaaa tcaatggtta tacatgacgt cgatttcacc attgcgtatc
     2941 ttaaccaaac atcaatagtg tgattactaa cgtaaatttt agggttttgt tgatatttcg
     3001 ttgaagttaa tgacccggat tggcatatgg agtattcaga atatttatga aaaagcggaa
     3061 aaccgtgaag aagcgttacg ttattgcgct ggtgatagtc atcgccggac tgattacgtt
     3121 atggagaatt cttaacgcac ccgtgccgac ttatcagaca ctgattgtgc gccccggtga
     3181 tttacagcaa agcgtgctgg cgaccggaaa gctggacgcg ctgcgtaagg ttgatgtggg
     3241 cgcgcaggtc agcggtcagt tgaaaactct gtcggtggcg attggcgata aagtaaaaaa
     3301 agaccagctt ttaggggtta ttgatcctga acaggctgaa aaccagatta aggaggtcga
     3361 agcaacgctg atggagctac gtgcgcagcg gcagcaggcg gaagcggagc tgaaactggc
     3421 gcgggtgacg tattcccgtc agcaacgtct ggcacaaacg caggcggttt cacagcagga
     3481 tctcgacacc gccgcgacgg agatggctgt gaaacaggcg caaattggca ccattgacgc
     3541 gcaaatcaag cgcaatcagg cttctctcga tacggctaaa accaatctcg attacactcg
     3601 catcgttgcc ccgatggccg gggaagtcac gcaaatcacc actctgcaag gccagacggt
     3661 gattgccgca caacaagcac cgaacattct gacgctggca gatatgagca ccatgctggt
     3721 aaaagcgcag gtttctgaag cggatgtaat ccacctgaag ccggggcaaa aagcttggtt
     3781 tacggtgctt ggcgatccac tgacgcgcta cgaggggcaa atcaaggatg tactaccgac
     3841 gccggaaaag gttaacgacg ctattttcta ttacgcccgt tttgaagtcc ccaaccccaa
     3901 tggtttgctg cggctggata tgactgcgca agtgcatatt cagctcaccg atgtgaaaaa
     3961 tgtgctgacg atccctctgt cggcgttagg cgatccggtt ggcgataatc gttataaagt
     4021 caaattgttg cgtaatggtg aaacacgcga gcgtgaagtg acgattggcg cacgtaacga
     4081 taccgatgtt gagattgtca aagggctgga agcgggcgat gaagtggtga ttggtgaggc
     4141 caaaccagga gctgcacaat gacgcctttg ctcgaattaa aggatattcg tcgcagctat
     4201 cctgccggtg atgagcaggt tgaggtgctg aagggcatca ccctcgatat ttatgccggt
     4261 gagatggtag cgattgttgg cgcttcaggt tccggtaaat cgaccctgat gaatattctc
     4321 ggctgtctgg ataaggccac cagcggcacc tatcgcgtcg ccggtcagga tgttgccaca
     4381 ctggacgccg atgcgctggc gcaactgcgc cgcgagcatt tcggctttat tttccagcgt
     4441 taccatttac tttcgcattt aaccgccgag cagaacgttg aagtacccgc cgtctatgcc
     4501 ggtcttgagc ggaaacagcg gctgcttcgc gcccaggagt tactgcaacg actggggctg
     4561 gaagaccgta cagagtatta tccggcacag ctttcgggtg gtcagcaaca gcgcgtcagc
     4621 atcgcgcggg cattgatgaa cggcggtcag gtaattcttg ccgatgaacc aaccggcgca
     4681 ctggacagcc attctggcga agaggtgatg gcgatcctgc atcagctgcg cgatcgcggg
     4741 catacggtga ttatcgtcac ccacgatccg caggtcgctg ctcaggccga gcgggtgatc
     4801 gaaattcgcg acggcgaaat tgtgcgcaat cctcccgcca ttgaaaaagt gaatgttgct
     4861 ggcgggacgg agcctgttgt caacacggtg tctggctggc ggcagtttgt cagcggtttt
     4921 aacgaggcgc tgacgatggc atggcgggcg ctggcagcga ataaaatgcg tactttactg
     4981 accatgctgg ggattattat cggtattgcg tcggtggttt ccattgtcgt ggtgggtgac
     5041 gccgccaaac aaatggtgct ggcggatatt cgttctattg gtacgaatac tattgatgtc
     5101 tatcccggga aagattttgg cgatgacgat ccgcaatatc agcaggcgct gaagtacgac
     5161 gacttaatcg ccatccaaaa acaaccgtgg gtcgcctcag ccacacctgc cgtctcgcaa
     5221 aacctgcgcc tgcgttataa caatgttgat gttgctgcca gtgccaatgg cgtgagcggc
     5281 gattatttta atgtctatgg catgaccttc agtgaaggaa acacctttaa tcaggagcag
     5341 ctgaacggtc gtgcgcaggt cgtggttctc gacagtaata ctcgccgcca gcttttcccc
     5401 cataaagcag atgtggttgg cgaggtgatt ctggtcggca atatgcccgc cagagtcatt
     5461 ggtgtggcgg aagaaaaaca gtcgatgttt ggtagcagta aagtgctgcg tgtctggcta
     5521 ccttacagca cgatgtccgg gcgagttatg ggccagtcgt ggctgaactc cattactgtc
     5581 agggtaaaag aaggatttga cagcgccgag gcggaacagc aactcacgcg tttactttca
     5641 ctgcgccacg gaaagaagga tttctttacc tggaacatgg acggcgtctt gaaaactgtt
     5701 gaaaagacca cacgtacttt acaactgttt ctgacgctgg tggcggtgat ttcgctggtg
     5761 gtgggcggta ttggtgtaat gaatattatg ctggtgtcag tgaccgagcg gacgcgggaa
     5821 attggcattc gcatggctgt aggtgcgcga gcaagcgatg ttttgcaaca gttcctgatc
     5881 gaagccgtac tggtttgcct ggtcggtggc gcgttgggaa taacgctgtc actgttaatt
     5941 gctttcacct tgcagctttt cttacccggc tgggagattg gtttttcacc gttggcactg
     6001 ctgctggcgt ttctctgctc gacggccacc gggattttat ttggatggtt acccgcacga
     6061 aatgcggcac gactggatcc agtagatgct ctggcacgag agtaattttt gagataaaaa
     6121 tgccagccga tcgggctggc attttgcctt taggatgtac acaatgagac agaagagcta
     6181 tgcgactgcc gcttctactt cgacgggcac aataacactg gcgtgattgc cttttggccc
     6241 ctggtggaca tcaaactgaa cggattgtcc agcttttagc gttctgtaac catccatctg
     6301 aatggtggaa taatgagcga aaatatcttc gccgccgcct tcagggcaga tgaaaccaaa
     6361 ccctttggca ttgttgaacc acttaacagt acccttttcc atgcttcgac atccttcgca
     6421 aatcttatac aagtaagatg gaataaaccg gggtcagaga gggggctgtt caaaacctcg
     6481 ccaactctgg aaatacaatt tagagaatta gggcgagccg tcaagcgttt gacaggggcc
     6541 agggggcagg tatgaatcaa aaatttgaag cagttaacgc tattgacagg aatgtgacag
     6601 atgtcgctga tgccaacgat agatgatagt tatctatcat gtggagtaga ttggtcaggc
     6661 aaataagctc ttgtcagcgg cagggcgttc tgccgataac cgtaaccgaa gatgataact
     6721 gacaatgggt aaaacgaacg actggctgga ctttgatcaa ctggcggaag aaaaagttcg
     6781 cgacgcgcta aaaccgccat ctatgtataa agtgatatta gtcaatgatg attacactcc
     6841 gatggagttt gttattgacg tgttacaaaa attcttttct tatgatgtag aacgtgcaac
     6901 gcaattgatg ctcgctgttc actaccaggg gaaggccatt tgcggagtct ttaccgccga
     6961 ggttgcagaa accaaagtgg cgatggtgaa caagtacgcg agggagaatg agcatccatt
     7021 gctgtgtacg ctagaaaaag cctgaatgca ggcataaaaa ttgggggagg tgcctatgct
     7081 caatcaagaa ctggaactca gtttaaatat ggctttcgcc agagcgcgcg agcaccgtca
     7141 ggagtttatg accgtcgagc acttgttact ggcgctgctc agtaacccat ctgcccggga
     7201 ggcgctggaa gcgtgttctg tggatttggt tgcgctctgt caggaactgg aagcctttat
     7261 tgaacaaacc acacccgttc tgcctgccag tgaagaggag cgcgacacac agccgacgct
     7321 gagttttcag cgtgtactgc aacgtgcggt cttccatgtc cagtcctccg gtcgcaatga
     7381 ggtaaccggt gcaaacgttc tggtcgctat ctttagcgaa caggagtcgc aggcggcata
     7441 tctgttgcgt aaacatgaag tcagccgtct cgatgtggtg aactttatct ctcatggcac
     7501 gcgtaaagac gagccgacac agtcttctga tcctggcagc cagccaaaca gcgaagaaca
     7561 agctggtggg gaggaacgta tggagaattt cacgacgaac ctgaatcagc ttgcgcgcgt
     7621 gggcggaatc gacccactga ttggtcgtga gaaggagctg gagcgtgcta ttcaggttct
     7681 ctgccgtcgc cgtaaaaaca acccgctgct ggtgggggaa tctggtgtcg gtaaaaccgc
     7741 gattgcggaa ggtcttgcct ggcgaattgt tcagggcgat gtgccggaag tgatggctga
     7801 ctgtacgatt tactctctcg atatcggttc tctgttagcg ggcactaaat atcgcggcga
     7861 ctttgaaaaa cgttttaaag cgttgctcaa gcagctggag caggacacta acagcatcct
     7921 gtttattgat gagatccaca ccattatcgg tgcgggtgca gcgtctggtg gccaggtcga
     7981 tgcggctaac ctgatcaaac cgttgctctc cagcggtaaa attcgcgtaa ttggttcgac
     8041 aacctatcag gagttcagca acattttcga gaaagaccgt gctctggcgc gtcgcttcca
     8101 gaaaattgat attactgaac cgtcgatcga agaaactgtt caaatcatca atggcctgaa
     8161 accgaagtat gaagcgcacc acgacgtgcg ttatactgca aaagcggtgc gtgcagcggt
     8221 agagctggcg gtgaaataca ttaacgatcg tcatctgccg gataaagcca ttgacgttat
     8281 cgacgaagcg ggcgctcgcg cacgcctgat gccggtaagc aaacgcaaga aaaccgttaa
     8341 tgtggcggat attgagtccg tggtggcccg tattgcgcgc attccagaga agagtgtttc
     8401 tcagagtgac cgcgataccc tgaaaaacct cggcgatcgc ctgaaaatgc tggtcttcgg
     8461 tcaggataaa gccattgagg cgctgactga agccattaag atggcgcgtg caggtttagg
     8521 tcacgaacat aaaccggttg gttcgttcct gtttgccggc cctaccgggg tcgggaaaac
     8581 agaggtgacg gtacagcttt cgaaagcgtt gggcattgag ctgctgcgct ttgatatgtc
     8641 cgagtatatg gaacgccata ccgtcagccg tctgattggt gcgcctccgg gatacgttgg
     8701 ttttgatcag ggaggtttgc tgactgatgc ggtcatcaag catccacatg cggtgctgtt
     8761 gctggacgaa atcgagaaag cgcatccgga cgtgttcaat attctgttgc aggtgatgga
     8821 caacggtacg ctgaccgata acaacggacg caaagcggac ttccgtaacg tggtgctggt
     8881 gatgaccacc aacgccgggg tacgtgaaac tgagcgtaaa tccattggtc ttatccacca
     8941 ggataacagc accgatgcga tggaagagat caagaagatc tttacaccgg aattccgtaa
     9001 ccgtctcgac aacattatct ggttcgatca tctgtcaact gacgtgatcc atcaggtggt
     9061 ggataaattc atcgtcgagt tgcaggttca gctggatcag aaaggtgttt ctctggaagt
     9121 gagccaggaa gcgcgtaact ggctggccga gaaaggttac gaccgggcaa tgggcgcacg
     9181 tccgatggcg cgtgtcatcc aggacaacct gaaaaaaccg ctcgccaacg aactgctgtt
     9241 tggttcgctg gtggacggcg gtcaggtcac cgtcgagcgg gataaagaga aaaatgagct
     9301 gacttacgga ttccagagtg cacaaaagca caaggcggaa gcagcgcatt aatctgattg
     9361 ttaggtaggt tggtcaagtc cgtaatctcg aaagaggtta cggacttttt gtttatgggg
     9421 tggaggaggt tcagaccctt tttttaatga tgatggtaag ttgttgataa ttagtgctgc
     9481 gggaaggtaa ggataaaaaa gggtgctgca ggagaatggg atggttttgc tttattaaca
     9541 acgggctaaa cgtgtagtat ttgagttcac tgccgtacag gcagcttaga aattcacagg
     9601 taacatactc cacccgccca ccatgttcac tgccgtacag acagataaaa tgcgaaaaaa
     9661 aagctcgcac tttcgtacga gctcttcttt aaatatggcg gtgagggggg gattcgaacc
     9721 cccgatacgt tgccgtatac acactttcca ggcgtgctcc ttcagccact cggacacctc
     9781 accaaattgt tttgctacca aacctcatgg gtggcaacgg ggcgctacta tagggagttg
     9841 gagtaaaacg gtcaagaaga attttaatga taattattgt ttgctcatac tgtaaacaag
     9901 ttgtgcagta tatctacatc gagacaagtt acggacttat acttccaaag tacttcatac
     9961 atatcacaaa ataaaaaggc cggttaaacc gaccttttac tcgttctttc tcttcgccca
    10021 tcaggcggta aaacaatcag cgactacgga agacaatgcg gcctttgctc aggtcgtacg
    10081 gggtcagttc aacagtcact ttgtcgcccg tcaggatgcg gatgtagttt ttgcgcattt
    10141 taccggagat gtgtgcagta accacgtgac cgttttctaa ctctacgcgg aacatggtat
    10201 taggcaacgt ttcaagaacg gtaccttgca tttcaatatt gtcttctttg gccatctaat
    10261 cctctggggt atcactaccg taatttgaac cggcaagata atgccgaagt tctgtaaata
    10321 agtaaagatt tgcgcgctaa atcgcaacaa acaggttcgg cacattactc cgaaaacaca
    10381 cggttaagcc gcaccaaaag cgcaacgtat aagggagcgg tgagataaac gatgggcgtt
    10441 acctgacgcg aaaaattcct tatcggcagc ggggtaatga gcgtaaccaa ctctgcgacc
    10501 gcaattataa cactctgggg agaaatgtgc cgaaaacatt cattcttgtg gtgaaaacaa
    10561 gcatcgtggt acccagaaat tattcggcaa tcgtccgagg cgcatttgat tgagataatt
    10621 aaggtaatcc cggcggggaa tttcgcaggc accaagcgat gctgtgtgat cgttaaggac
    10681 ctggcagtcg ataagcttac cgccatgacc gataaattcc tcacagaata ccagaagcgc
    10741 cgttttagac gcattttcca tccggctgaa catggactcg ccacaaaata gcgttccctg
    10801 ggccacgccg tacataccgc cgacaagctc atcttcacgc cagacttcaa tggagtgggc
    10861 atggccgagt tcgtgaaggc gatggtaggc ttcgaccacg ccacgcgtga tccaggttcc
    10921 ttcttcgcga tcgctggcac agccttcaat gacctgacca aaagcgtaat tcatcgtgac
    10981 acgatagggc gagcgtttat gaaatcgctt catactacgg ctgatatgca gtgattctgg
    11041 ccatagcacc gcgcggggat cgggcgacca ccagaggatg gggtcgcctg gagaaaacca
    11101 cggaaaaata ccacgctggt aagccattaa caggcgcgca gggctaagat cgcccccaag
    11161 tgccagcagg ccgttaggct cacgtaatgc gccttccggg gaagggaagg ctattgaatg
    11221 gcgagaaagc tgaaccaggc gcatgaccgc aaaactccac gcaagtcgga tcgttcaata
    11281 atagcttaca aaccctgctt gaactggtaa taacgcccct gtctggcaag cagctctgcg
    11341 tgagtacctt gctcaataat ttgcccgttg tccatcacta ttatttgttg gaaacgagag
    11401 agtccgcgaa gtcgatgggt gaccattaac accgttttct cacgcatcat ttctgcaagc
    11461 aattcaagga tctggctttc ggttgtggca tctaagcctt cggtaggttc atccagcaac
    11521 accagtggcg catcatgtaa cagcgcacgg gcgatagcca gacggcgcag ttcaccaccg
    11581 gagagctggc gtccgccttc acctaaccaa ctgttgagac ctgcatcctc gagcagcttc
    11641 tccagaccaa cgcgacgcaa gctctccgcc agagcctcat cactactgcc aggcgaggcg
    11701 agtaacagat tatcacgcag cgtggcgcta aacagatgca ctcgctgagg aacaacgctg
    11761 atggtctgtc gtagagccgc ttcattcagg ctggctatgg ggctatcgtt aagcaaaatc
    11821 tcgccctgtt gcgggtccca agcgcgggtc agcagttgta acagtgttga tttgccgcat
    11881 ccggttcgcc cgagaatcgc aatatgttcc ccggcgttta cctgaagaga aatcccttta
    11941 agtgcctgtt gggattgctc cggataagtg aactgaacat cccgtaatgt cagcgaaacg
    12001 cgatcggcaa cacgagtttg ggtatcaggg aaggtgactt ccggtttttg atccgttaaa
    12061 tcagtgatcc gaacggcaga ggcaatgact tgccccagat gctgaaatgc acccgttact
    12121 ggtgccagtg cttcaaacgc ggctaacgcg cagaagacaa acagggcaat taacgcgccg
    12181 ggttgagcat tgccgccaac gccgccagac gccatccaca gcatcaggat caccgctaac
    12241 gcgccaatga gcagcattat cacttgcgac aatgcggtca gttcagattg acggcgttgc
    12301 gcttccagcc attgaatttc tgtattctct agttgcgtgc gataacgatc gctggcacca
    12361 aaaatggtca gctcagcttg cccttgcagc caggccgtca gttgttggcg atactgtccg
    12421 cgaagatgag tcagattttg cccggtgctt tttcccgcac gataaaacag cggtggcatc
    12481 aggaaaagcg tcagtaacat aatgccgccc agcgtaaagg cgagggtgaa atcaaggaaa
    12541 cttaacccga ttgtcaccat cataatcacc acaaaagcgc ccaccagcgg cgagataacg
    12601 cgcaggtaaa gatgatcgag cgtatcaaca tccgccacca cgcgattgag caattcgccc
    12661 tgacgatagc gcgccagtcc ggcaggggag aggggcaaca atttgctgaa ggtgtaaatg
    12721 cgcagatgct gcaacacgcg gaaagtcgcg tcgtgactta ccagacgttc aaaataacgc
    12781 ccggcagtac gggtgattgc ggcaccacgc acgcccgcag cgggtagcat atagttgaag
    12841 ctgtacagtc cggcaacccc cgcaaccgct gaggccgaga ggaaccagcc ggaaagtgtc
    12901 aacagtccga tactggcgag cagcgtcaca attgccagca caataccaag acttaacatc
    12961 catttatgac gtttatacag tgctagatag ggtagcaaag cgcgcattta aatctcctcc
    13021 tgacgatggg ccagtaatgt ggcgaatggg ccaccagcca cacttaattc cgcgtaacgt
    13081 ccttgctcaa taatccggcc atcctgcata acccaaatga catcccagtc agcaagatct
    13141 tctaactggt gggtgaccat taacgttgtc tggcgcagag aggcggcatt cagcgcctcc
    13201 attacgcgct gttcactgtg agcatcaagg ctggcagcgg gttcatccaa cagtaatagc
    13261 gaacagggat ttagtaacac acgggccacc gccacgcgct gcgcctgccc cacggaaagg
    13321 cgggcagcct ggtcgccaac aggcgtatca acgccttgtg gcaggagcgg tagaaactcg
    13381 ctgacccagg cgttatccag cgctgcttgt aattcatgtt cgctggcatc aggtcgcgcc
    13441 agtagtacgt tatcccgtaa tgttgctgcc ggtaattgtg gattttgccc aacccaggag
    13501 agatgtttac gccatgattc tggtgataaa tcgcgtaatt ctatcccgtt gattcgtagc
    13561 gatccctgat atgagagaaa accagaaagc gcgttcaaca gtgaactttt acctgaaccg
    13621 ctgcgaccaa ccaacacggc acgttggcct gctggcaaag taaagttcag cggtccggcc
    13681 agcgttttac cttccggcga cgtgataaac agatcctcgg cctcaatggt caccggatcg
    13741 gtcgatgcta attccacctc gccacgctgc ggatgggcga gcggggtttc cataaatgtt
    13801 ttcagactgt cagctgcacc aacagcctgg gctttagcat gataaaacgt accgagatcg
    13861 cgtaatggct ggaaaaactc tggcgcaagg atcagggcca gaaaacccgc agccagcgtc
    13921 acgccagtat cgtagtgacc aaaatccagc tcgccgagat aggaaaaacc aaagtagacc
    13981 gccaccagag caattgacag cgaggtaaaa aattcgagaa tgccggagga taaaaatgcc
    14041 agccgtagca cttccattgt ccgttggcgg aaatcttccg aagcagaacg aatactttca
    14101 atttcagctt caccacgacc aaaaatacgc aatgtttcca tgccgcgcag gcgatcgagg
    14161 aaatgcccac ttaagcgagc aagagcgaga aagttacgtc ggttagcatc ggcagccccc
    14221 attccaacca gcgccataaa caacggaatt aacggtgcag tgcccagcag aatgagcgcc
    14281 gcagcccagt ttgaggggaa gattgccacc acaatcagca acggcaccga cactgccagc
    14341 gccatttgcg gcaggtagcg tgcatagtaa tcatgcatat cgtcaatttg ctcgagtacc
    14401 agcgtcgccc agctccccgc aggtttaccc tgaatccacg ctggccctgc ttgttgcaga
    14461 cggtcgagaa cctgccggcg gatggcaaag cggatatgct gcccggcgtg ataacccacc
    14521 cgttcgcgta accagaccac ccatgcgcgc agtacaaagg tcagaaccag taacgtaaag
    14581 ggaagcagca gggcttcacg gggaatattc tccataatca tatgttgcag aattcgcgcc
    14641 atgaaccagg cctgggcaat gatcaatatg ccactcacaa agcccagcag acgagaaata
    14701 ttcagccaac gttgggagat gacgctttgc tgttttaacc agcgggttaa ctctttttga
    14761 cgagatttat tcattgcacg cttagcaggt gagttatcag aattatttgc agagcaatgt
    14821 tacaacgggg aaaaaataaa ggcgacccat agtcgcaagg tgtcgccttc tttacttttg
    14881 ttactgattt gtaaaattat tttgcgtcag ctaaaccatc gaggtagcgt tccgcatcaa
    14941 gtgctgccat gcagcctgta ccggccgaag taatggcctg acgataaata tgatccatca
    15001 cgtcacccgc ggcaaagacg ccaggaatgc tggtctgggt ggcattacca tgaatacccg
    15061 actgtacttt gatgtagccg ttttccagtt ccagctgccc ttcgaaaatg gcagtattcg
    15121 ggctgtgacc gatagcaaca aacagaccgg caacgtcgag tgattcgatg ttatcgctgt
    15181 tttgcgtatc gcgcagacga acgccagtga cacccatttg atcgccggtc acttcttcca
    15241 gcatccggtt ggtgtgcaga atgatgttgc cgttctccac tttatccatc agacgcttaa
    15301 tgaggatttt ttccgcgcgg aaaccgtcac ggcggtgaat cagatgtact tccgaagcga
    15361 tgttagacag atacaacgcc tcttcaaccg cggtattgcc gccgccgatg accgcaactt
    15421 tctggttgcg atagaagaaa ccgtcgcagg ttgcacaagc agaaacccca cggcctttaa
    15481 aggcttcttc agagggcagg ccgagatagc gtgcagaagc tccggtggca ataatcagcg
    15541 cgtcgcaagt gtattcgccg ttatcgccat tcagacggaa cggacggttt tgcagatcca
    15601 ccttgttgat atgatcaaaa atgatttcag tttcaaattt ggtggcatgt tcgtgcatgc
    15661 gctccattaa taacggaccg gtcagatcgt ttggatcgcc aggccagttt tccacttctg
    15721 tggtggtggt cagttggccg cctttttcca tgccggtaat cagcacaggt tgcaggttgg
    15781 cgcgcgccgc atagacagca gcggtgtatc ccgccgggcc tgaacccagg ataagcagtt
    15841 tactgtgttt ggtcgtgccc atgagatccc catagttgtt ggcagacaat gggcaggatt
    15901 gtagggaatt tactgacgta aaaaaagagt atgacgattt tgttaacaat ttgtgcaatc
    15961 ggcagcatcg ataagcaggt caaattctcc cgtcattatc acctctgcta cttaaatttc
    16021 ccgctttata agctgattaa atgatgaata aacgcccctg ttaatgaata tctggcatgt
    16081 tgtactaaaa atcgatgttt tgctttgaca atcccctggt gttttgcgaa aacattcgag
    16141 gaagaaaaaa aacagtattc ttatatgcgc ataaccatgc atgtaaatac catgtttacc
    16201 gtgctagtga aatctacgta tggcgtggac agacgccatt cgtgatgtcg atagctgcca
    16261 caaggcaacg gtcttctcac cgtagaccca ggcattgcgc gccgtgaatc ttcatgattt
    16321 cggtctatcg tgacgggtag cgactctgaa cagtgatgtt tcagggtcag acaggagtag
    16381 ggaaggaata cagagagaca ataataatgg tagatagcaa gaagcgccct ggcaaagatc
    16441 tcgaccgtat cgatcgtaac attcttaatg agttgcaaaa ggatgggcgt atttctaacg
    16501 tcgagctttc taaacgtgtg ggactttccc caacgccgtg ccttgagcgt gtgcgtcggc
    16561 tggaaagaca agggtttatt cagggctata cggcgctgct taacccccat tatctggatg
    16621 catcacttct ggtattcgtt gagattactc tgaatcgtgg cgcaccggat gtgtttgaac
    16681 aattcaatac cgctgtacaa aaacttgaag aaattcagga gtgtcattta gtatctggtg
    16741 atttcgacta cctgttgaaa acacgcgtgc cggatatgtc agcttaccgt aagttgctgg
    16801 gggaaaccct gctgcgtctg cctggcgtca atgacacacg gacatacgtt gttatggaag
    16861 aagtcaagca gagtaatcgt ctggttatta agacgcgcta acacggaaca ggtgcaaaat
    16921 cggcgtattt tgattacact cctgttaatc catacagcaa cagtactggg gtaacctggt
    16981 actgttgtcc gttttagcat cgggcaggaa aagcctgtaa cctggagagc ctttcttgag
    17041 ccaggaatac actgaagaca aagaagtcac attgacaaag ttaagtagcg gccgtcgcct
    17101 tctggaagcg ttgctgatcc ttattgtcct gtttgccgtc tggttgatgg ctgccttact
    17161 aagctttaac ccttcggacc ccagctggtc gcaaacggcc tggcatgaac ctatccataa
    17221 tttaggtggg atgcccggtg cgtggctggc agatacgctg ttctttattt ttggcgtgat
    17281 ggcttacacc attcccgtca ttattgtcgg cggttgttgg tttgcctggt gtcatcagtc
    17341 cagtgacgaa tacattgatt attttgccgt ttcgttacgc atcattggcg ttttggcgct
    17401 catccttacc tcctgtggtc tggcggcaat caacgctgac gatatctggt attttgcctc
    17461 cggtggcgtc attggcagct tactaagcac tacgttacaa ccactgctac acagtagcgg
    17521 gggaactatt gcgctgctct gcgtttgggc tgcgggcctg acgctgttca ccggttggtc
    17581 atgggtgacc attgctgaaa aactcggcgg ctggatttta aacattctca ccttcgccag
    17641 taatcgtacc cgtcgcgatg atacctgggt cgatgaagat gaatatgaag atgacgaaga
    17701 gtatgaagat gaaaaccacg gcaaacagca tgaatcacgc cgtgcccgta ttcttcgcgg
    17761 cgcgctagcg cgtcgtaaac ggttggcgga aaaattcatt aatccgatgg ggcggcaaac
    17821 agacgctgcg ttgttctccg gtaagcggat ggatgatgaa gaagagatta tctacactgc
    17881 acgcggtgtg gctgccgacc cggacgacgt cctattttcg ggcaatcgtg caacgcagcc
    17941 agaatatgac gaatacgatc cattattaaa cggtgcgcca attaccgaac ctgttgctgt
    18001 agcagctgct gctaccacgg cgacacaaag ctgggctgcg ccggttgaac ctgtgaccca
    18061 gacgccgcct gttacttctg ttgatgttcc accttcgcaa cctacagtag cctggcagcc
    18121 tgtaccgggt ccacaaacgg gagagccggt tattgctcct gcaccggaag gttacccaca
    18181 gcagccacaa tatgcgcagc ctgcagtgca atataatgag ccgctgcaac aaccttacta
    18241 cgctcctgcg gcggaacaac ctgttcagca accgtattac gcaactgcgc cggaacagcc
    18301 tgcgcaacag ccgtattatg cccctgcgcc agaacaaccg gtggcaggta acgcctggca
    18361 agccgaagag cagcaatcca cttttgctcc acagtctaca taccagactg agcaaactta
    18421 tcagcagcca gccgctcagg agccgttgta ccaacagccg caacccgttg aacagcagcc
    18481 tgttgtggag cctgaacccg ttgtagaaga gacaaaaccc gcgcgtccgc cgctttacta
    18541 ttttgaagaa gtggaagaga agcgagcccg tgaacgtgaa caacttgcgg cctggtatca
    18601 accgattcca gaaccggtta aagaaccaga accgatcaaa tcttcgttga aagcgccttc
    18661 tgttgcagca gtacctccag tagaagccgc tgccgctgtt tctccgctgg catctggcgt
    18721 gaaaaaagcg acactggcga cgggggctgc cgcaaccgtt gccgcgccag tcttcagtct
    18781 ggcaaatagc ggtggaccgc gtccgcaagt caaagaggga attggcccgc agttgccacg
    18841 accgaaacgt atccgcgtgc caactcgtcg tgaactggcg tcttacggta ttaagctgcc
    18901 ctcacagcgt gcggcggaag agaaagcccg tgaagcccgg cgcaatcagt atgattctgg
    18961 cgatcagtat aacgatgatg aaatcgatgc gatgcagcag gatgaactgg cacgtcagtt
    19021 cgcccagaca cagcagcaac gctatggcga acagtatcaa catgatgtgc ccgtaaacgc
    19081 agaagatgca gatgctgcgg cagaggctga actggctcgt cagtttgcgc aaactcaaca
    19141 acaacgttat tccggcgaac aaccggctgg ggcgaatccg ttctcgctgg atgattttga
    19201 attttcgcca atgaaagcgt tgctggatga tggtccacac gaaccgttgt ttacgccaat
    19261 tgttgaacct gtacagcagc cgcaacaact ggttgcaccg cagcagcagt atcagcagcc
    19321 acaactgccg gttgcgccac agcagcaata tcagcagccg caacagccgg ttgcgccgca
    19381 gcagcagtat cagcagccac aacagcaggt tgcgccgcag ccacaatatc agcagccgca
    19441 acaaccggtt gcaccgcagc agcaggatac cctgcttcat ccgctgttga tgcgtaatgg
    19501 cgacagccgt ccgttgcata aaccgacgac gccgctgcct tctctggatt tgctgacacc
    19561 gccgccgagc gaagtggagc cggtagatac ctttgcgctt gaacaaatgg ctcgcctggt
    19621 ggaagcgcgt ctggctgatt tccgtattaa agccgatgtc gtcaattact ctccggggcc
    19681 ggttatcact cgctttgaac ttaacctggc tcctggcgta aaagcggcgc gcatttctaa
    19741 cttgtcacgg gaccttgccc gttcactttc gacggtggcg gtgcgtgtcg ttgaagttat
    19801 tcctggcaaa ccctatgtag gtctggagtt accaaataaa aaacgacaaa ccgtttatct
    19861 gcgcgaagtt ttggataacg ctaaattccg cgataatccg tcgccattaa ccgtggtgct
    19921 gggtaaagat atcgccggtg agccggtggt tgccgatctg gcgaaaatgc cgcacttgtt
    19981 ggttgcgggg actaccggtt ccggtaaatc tgtcggtgtg aacgcgatga tcctgagcat
    20041 gctttataaa gcacagccag aagatgtgcg tttcatcatg atcgacccga aaatgctgga
    20101 gctttcggtt tatgaaggca ttccgcatct gttaacggaa gtcgttactg atatgaaaga
    20161 tgccgccaac gcgctgcgct ggtgtgttaa cgagatggag cgtcgttata aactgatgtc
    20221 tgcgctgggt gtgcgtaatc tggcgggtta taacgaaaaa attgctgaag ccgatcgcat
    20281 gatgcgtccg attccagacc cgtactggaa gccgggtgac agtatggatg cccagcatcc
    20341 ggtgctgaaa aaagaaccat acattgtggt gttggttgac gaatttgccg acctgatgat
    20401 gacggtaggt aaaaaagtgg aagagctgat agcacgtctg gcgcaaaaag cccgtgccgc
    20461 gggtatccac ctcgtactgg caactcagcg tccatcggtt gatgttatta ctggtctgat
    20521 taaagcgaat attccgaccc gtatcgcctt taccgtatcc agtaagattg actcacgtac
    20581 cattcttgat caggctggcg cggaatcact gctggggatg ggggatatgc tctactctgg
    20641 gccgaactcc acgttgccgg tacgtgtcca tggtgctttt gttcgcgatc aggaagttca
    20701 tgccgtggtg caggactgga aagcgcgtgg tcgcccacag tatgttgatg gcatcacttc
    20761 cgacagtgaa agcgaaggtg gcgcgggcgg tttcgatggc gctgaagaac tggatccgtt
    20821 gttcgatcag gcggtgcagt ttgtcactga aaaacgcaaa gcgtcaattt ctggcgtaca
    20881 gcgtcagttc cgcattggtt ataaccgtgc agcgcgtatt atcgaacaga tggaagcgca
    20941 ggggattgtc agcgaacagg ggcacaacgg taatcgtgaa gtgctggccc caccgccgtt
    21001 tgactaatta atgcattgcc ggataaggcg cggtagcgtc gcatccggca ctctatcaac
    21061 tgaaaattca gtattttctt ttttcctcaa gctgattatt agcctggaat agagagtaga
    21121 gggaactccc gatcgggagt gacgtaattt gaggaataat gatgaaaaaa attgccatca
    21181 cctgtgcatt actctcaagc ttagtagcaa gcagcgtttg ggctgatgcc gcaagcgatc
    21241 tgaaaagccg cctggataaa gtcagcagct tccacgccag cttcacacaa aaagtgactg
    21301 acggtagcgg cgcggcggtg caggaaggtc agggcgatct gtgggtgaaa cgtccaaact
    21361 tattcaactg gcatatgaca caacctgatg aaagcattct ggtttctgac ggtaaaacac
    21421 tgtggttcta taacccgttc gttgagcaag ctacggcaac ttggctgaaa gatgccaccg
    21481 gtaatacgcc gtttatgctg attgcccgca accagtccag cgactggcag cagtacaata
    21541 tcaaacagaa tggcgatgac tttgtcctga cgccgaaagc cagcaatggc aatctgaagc
    21601 agttcaccat taacgtggga cgtgatggca caatccatca gtttagcgcg gtggagcagg
    21661 acgatcagcg cagcagttat caactgaaat cccagcaaaa tggggctgtg gatgcagcga
    21721 aatttacctt caccccgccg caaggcgtca cggtagatga tcaacgtaag tagaggcacc
    21781 tgagtgagca atctgtcgct cgatttttcg gataatactt ttcaacctct ggccgcgcgt
    21841 atgcggccag aaaatttagc acagtatatc ggccagcaac atttgctggc tgcggggaag
    21901 ccgttgccgc gcgctatcga agccgggcat ctgcattcta tgatcctctg ggggccaccg
    21961 ggtaccggca aaacaactct cgctgaagtg attgcccgct atgcgaacgc tgatgtggaa
    22021 cgtatttctg ccgtcacctc tggcgtgaaa gagattcgcg aggcgatcga gcgcgcccgg
    22081 caaaaccgca atgcaggtcg ccgcactatt ctttttgttg acgaagttca ccgtttcaac
    22141 aaaagccagc aggatgcatt tctgccacat attgaagacg gcaccatcac ttttattggc
    22201 gcaaccactg aaaacccgtc gtttgagctt aattcggcac tgctttcccg tgcccgtgtc
    22261 tatctgttga aatccctgag tacagaggat attgagcaag tactaactca ggcgatggaa
    22321 gacaaaaccc gtggctatgg tggtcaggat attgttctgc cagatgaaac acgacgcgcc
    22381 attgctgaac tggtgaatgg cgacgcgcgc cgggcgttaa atacgctgga aatgatggcg
    22441 gatatggccg aagtcgatga tagcggtaag cgggtcctga agcctgaatt actgaccgaa
    22501 atcgcaggtg aacgtagtgc ccgctttgat aacaaaggtg atcgctttta cgatctcatt
    22561 tccgcactgc ataaatcggt acgtggtagc gcacccgatg cggcgctgta ctggtatgcg
    22621 cgaattatta ctgccggtgg cgatccgtta tatgttgcgc gtcgctgtct ggcgattgcg
    22681 tctgaagatg tgggtaatgc tgatccacga gcgatgcagg tggcaattgc agcctgggat
    22741 tgctttactc gcgttggccc ggcggaaggt gaacgcgcca ttgctcaggc gattgtttac
    22801 ctggcctgcg cgccaaaaag caacgctgtc tacactgcgt ttaaagctgc gctggcggat
    22861 gttcgcgaac gtccggatta tgacgtgccg gttcatttgc gtaatgcgcc gacgaaatta
    22921 atgaaggaaa tgggctacgg gcaggaatat cgttacgctc atgatgaagc aaacgcttat
    22981 gctgccggtg aggtttactt cccgcgggaa atagcacaaa cacgctatta tttcccgaca
    23041 aacaggggcc ttgaaggcaa gattggcgaa aagctcgcct ggctggctga acaggatcaa
    23101 aatagcccca taaaacgcta ccgttaatgt tatcgttgcg gtaatgttgt tactgtatcc
    23161 ctgtggtcgc aggctgtggc cacatctccc atttaattcg ataagcacag gataagcatg
    23221 ctcgatccca atctgctgcg taatgagcca gacgcagtcg ctgaaaaact ggcacgccgg
    23281 ggctttaagc tggatgtaga taagctgggc gctctcgaag agcgtcgtaa agtattgcag
    23341 gtcaaaacgg aaaacctgca agcggagcgt aactcccgat cgaaatccat tggccaggcg
    23401 aaagcgcgcg gggaagatat cgagtcttta cgtctggaag tgaacaaact gggcgaagag
    23461 ctggatgcag caaaagccga gctggatgct ttacaggctg aaattcgcga tatcgcgctg
    23521 accatcccta acctgcctgc agatgaagtg ccggtaggta aagacgaaaa tgacaacgtt
    23581 gaagtcagcc gctggggtac cccgcgtgag tttgactttg aagttcgtga ccacgtgacg
    23641 ctgggtgaaa tgcactctgg cctcgacttt gcagctgcag ttaagctgac tggttcccgc
    23701 tttgtggtaa tgaaagggca gattgctcgc atgcaccgcg cactgtcgca gtttatgctg
    23761 gatctgcata ccgaacagca tggctacagt gagaactatg ttccgtacct ggttaaccag
    23821 gacacgctgt acggtacggg tcagctgccg aaatttgctg gcgatctgtt ccatactcgt
    23881 ccgctggaag aagaagcaga caccagtaac tatgcgctga tcccaacggc agaagttccg
    23941 ctgactaacc tggtgcgcgg tgaaatcatc gatgaagatg atctgccaat taagatgacc
    24001 gcccacaccc catgcttccg ttctgaagcc ggttcatatg gtcgtgacac ccgtggtctg
    24061 atccgtatgc accagttcga caaagttgaa atggtgcaga tcgtgcgccc ggaagactca
    24121 atggcggcgc tggaagagat gactggtcat gcagaaaaag tcctgcagct gctgggcctg
    24181 ccgtaccgta aaatcatcct ttgtaccggc gacatgggct ttggcgcttg caaaacctat
    24241 gacctggaag tatggatccc ggcacagaac acctaccgtg agatctcttc ctgctccaac
    24301 gtttgggatt tccaggcacg tcgtatgcag gcacgttgcc gcagcaagtc ggacaagaaa
    24361 acccgtctgg ttcataccct gaacggttct ggtctggctg ttggtcgtac gctggttgca
    24421 gtaatggaaa actatcagca ggctgatggt cgtattgaag taccagaagt tctgcgtccg
    24481 tatatgaacg gactggaata tattggctaa tacccaattt ttctgaatct aaaaagcgcc
    24541 tgcgggcgct ttttttgtct ccctttgata ccgaacaata attactcctc acttacacgt
    24601 aatactactt tcgagtgaaa atctacctat ctctttgatt ttcaaattat tctatgtata
    24661 caagcctata tagcgagctg ctatagaaat aattacacaa tacggtttgt tactggaatc
    24721 aatcgtgagc aagcttgagt gagccattat gaaaacgaaa atccctgatg cggtattggc
    24781 tgctgaggtg agtcgccgtg gtttggtaaa aacgacagcg atcggcggcc tggcaatggc
    24841 cagcagcgca ttaacattac cttttagtcg gattgcgcat gctgtcgata gcgccattcc
    24901 aacaaaatca gacgaaaagg ttatctggag cgcctgtaca gttaactgtg gtagtcgctg
    24961 cccgctacgt atgcacgtcg tggacggtga aatcaaatat gtcgaaacgg acaataccgg
    25021 cgatgacaat tacgacggcc tgcactaggt tcgcgcctgc ctgcgtgggc gttccatgcg
    25081 tcgccgtgtc tacaatccgg accgcctgaa atatccgatg aaacgagtcg gggcgcgcgg
    25141 tgaaggcaaa ttcgagcgca ttagctggga agaagcctac gacatcatcg cgaccaatat
    25201 gcagcgcctg atcaaagagt acggcaacga gtctatctat ctgaactatg gcaccggtac
    25261 gctgggcggc accatgaccc gctcctggcc gccgggaaat accctggtcg cgcggctgat
    25321 gaactgctgc ggcggctatc tgaaccatta cggcgactac tcctccgcgc aaattgcgga
    25381 aggtttgaac tatacctacg gcggctgggc agatggcaac agcccgtcgg atatcgaaaa
    25441 cagtaagctg gtagtgctgt ttggtaataa ccctggcgaa acgcgaatga gtggcagtgg
    25501 ggtgacttac tatcttgaac aggcacgcca gaaatctaat gcccgcatga tcatcatcga
    25561 tccgcgctat accgacaccg gtgccgggcg cgaagatgag tggatcccta ttcgtccggg
    25621 aacagatgcc gcactggtta acggtctggc gtacgtcatg atcactgaaa acctggtgga
    25681 tcaggcattc ctcgataaat attgcgttgg ctacgatgag aaaaccctgc cagccagtgc
    25741 gccgaaaaat ggccactata aagcttatat tctgggtgaa gggccagatg gcgtggctaa
    25801 aacaccggaa tgggcctcac aaatcaccgg tgttccggca gacaaaatca tcaaactggc
    25861 tcgtgaaatc ggcagtacca aaccggcgtt tatcagccag ggatggggcc cgcagcgtca
    25921 cgctaacggt gaaatcgcaa cccgtgctat ctcgatgctg gcgattctga ccggtaacgt
    25981 tggtattaac ggaggcaaca gcggcgcgcg tgaaggttca tacagcttac cgtttgtccg
    26041 tatgccgacc ttggaaaacc cgatccagac cagcatttcg atgtttatgt ggaccgatgc
    26101 cattgaacgt ggcccggaaa tgacggcgct gcgtgatggt gtacgcggga aagataagct
    26161 ggatgtgccg atcaaaatga tctggaacta tgccggtaac tgcctgatta accagcattc
    26221 tgaaatcaac cgtacccatg aaatccttca ggatgataag aagtgcgagc tgattgtggt
    26281 tatcgactgc cacatgacct catcggcgaa atatgctgac atcctgctgc ctgactgcac
    26341 cgcttccgaa cagatggact ttgcgctgga tgcatcctgc gggaatatgt cttacgtgat
    26401 tttcaacgat caggtgatta aaccgcgctt tgaatgtaag accatctatg aaatgaccag
    26461 cgaactggca aaacgtcttg gcgttgagca acagtttact gaaggccgta cacaggaaga
    26521 gtggatgcgg catctgtatg cccagtcgcg ggaagcgatt cctgaactgc caacgtttga
    26581 agagttccgc aagcagggga tctttaaaaa gcgcgaccca caagggcacc acgttgctta
    26641 taaagctttc cgtgaagatc ctcaggcaaa tccactgacc acgccatcgg gcaaaattga
    26701 gatttattcg caggcgctgg ctgacattgc cgctacctgg gaattgccag aaggcgatgt
    26761 gatcgatcca ctgccgatct acacgccggg ctttgaaagt tatcaggatc cgttgaacaa
    26821 acagtatccg ctgcagctta cgggtttcca ctataaatct cgcgttcact caacttacgg
    26881 cgacgttgat gtgctgaaag cagcttgccg tcaggaaatg tggatcaacc cgcttgatgc
    26941 gcaaaaacgc ggtatcaaca acggcgataa agtcaggatc tttaacgatc gtggtgaggt
    27001 tcatattgag gcgaaagtga cgccacgaat gatgccgggt gtggtcgcac tgggtgaagg
    27061 tgcctggtat gacccggata caaaacgtgt cgataagggc ggttgtatca acgtactgac
    27121 cactcaacgt ccgtctcctc tcgctaaggg gaatccgtca catacaaacc ttgttcaggt
    27181 tgaaaaggtg taaggagtaa ccgatgacaa cccagtatgg attttttatt gattccagcc
    27241 gttgcaccgg ttgcaaaacc tgcgagctgg cctgtaaaga ctacaaagat ttgacgccag
    27301 aagtcagctt ccgccgcatt tatgaatatg ctggcggcga ctggcaggaa gataacggtg
    27361 tctggcacca gaacgtgttt gcctactatc tgtcgatttc atgtaaccac tgcgaagatc
    27421 cggcttgtac taaagtctgc ccgagcggtg cgatgcataa acgtgaagat ggttttgttg
    27481 tggtcgatga agatgtgtgc attggctgcc gctactgcca tatggcttgc ccgtatggcg
    27541 caccgcaata taacgaaacg aaaggccata tgaccaaatg cgatggttgt tatgaccgtg
    27601 ttgcggaggg taaaaagccg atctgtgttg aatcttgtcc gctgcgggcg ctggatttcg
    27661 gccctatcga cgagctgcgt aaaaaacatg gcgatctggc ggccgttgcg ccgttgccgc
    27721 gagctcactt taccaaaccg aatattgtga tcaaacccaa tgccaatagc cgcccgaccg
    27781 gggataccac tggctatctg gcaaacccga aggaggtgtg agatgggaag tggatggcat
    27841 gaatggccgc tgatgatctt cacggtcttc gggcaatgtg tagcaggtgg ttttatcgtt
    27901 ctggctttgg cgctgctcaa aggcgacctg cgagcagaag cccagcagcg tgttatcgcc
    27961 tgcatgtttg gtttatgggt gctgatgggc attggcttta tcgcctctat gctccatctt
    28021 ggttcaccaa tgcgcgcttt taactcgctc aaccgggtag gggcttcagc actcagtaac
    28081 gaaatcgcca gcggttcgat cttttttgcc gtaggcggca tcggctggtt gctggcaatg
    28141 ctgaaaaagc tgtcaccggc attgcgtacg ctgtggctga tagtgacgat ggttcttggc
    28201 gtcatctttg tctggatgat ggtgcgtgtg tataacagca ttgataccgt tccgacctgg
    28261 tacagcatct ggacgccgat gggcttcttc ctgacgatgt ttatgggcgg cccgttactg
    28321 ggttacctgt tgttgagtct ggctggcgtc gatggctggg cgatgcgtct gctgccagca
    28381 atttctgtac tggcactggt agtgagtggc gtggtgtcag tgatgcaggg cgcagagctg
    28441 gcgactattc atagttctgt gcagcaggcc gcagcgctgg tgccggacta tggtgcgctg
    28501 atgtcctggc ggatcgtgct tttggccgtt gccctgtgct tgtggattgc accacagcta
    28561 aaaggttatc agcctgcggt tccgctactt tctgtatcat tcattctgct tctggcaggg
    28621 gaattaatcg gtcgcggcgt attctatggt ttgcatatga ccgtggggat ggccgtcgca
    28681 agctaatcat aacaaccggg gtttcggccc cggttttctt ttatttctgc ttcgttaacg
    28741 tgtcataact ggtcatcaaa ttacgataat caggaatgtg gttagagaac aacgtcgcca
    28801 gtccttcaat atcattatgc cagtcgcgat gcagctcgca cgccacgccg aatcatgtca
    28861 tcaattgcgc accagcttgc gacatgcgat cccatgccga atgccgggta atttcattaa
    28921 aggtccctga cgcgtcagtc acgacaaaga cgtcaaaccc ttcttcaatg gctgaaagcg
    28981 ccgggaatgc cacgcaaact tcggttacca caccggcaat aattaactgt tttttacctg
    29041 tcgctttgac agcttttaca aaatcttcgt tatcccaggc gttaatattt cccgggcgag
    29101 caatgtaagg tgcatcgggg aattgtgctt tcagttctgg aactaatggg ccgttaggac
    29161 cggtttcaaa actggtggta agaatagttg gtaagttgaa atacttagcc tggtcaccca
    29221 gcgccagcac gttattttta aacttatcgg gttcgatatc ccgtacaagg gaaagtaaac
    29281 cagcctggtg atcaacaagc aaaacg
//
LOCUS       DADMHC010000031        29235 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.031, whole genome shotgun sequence.
ACCESSION   DADMHC010000031 DADMHC010000000
VERSION     DADMHC010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29235)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29235)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29235
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.031"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..527)
                     /gene="acpT"
                     /locus_tag="JNZ57_001125"
     CDS             complement(<1..527)
                     /gene="acpT"
                     /locus_tag="JNZ57_001125"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase AcpT"
                     /protein_id="HAY8827417.1"
                     /translation="MYRIVLGKVSTLSAAPLPPGLREQAPQGPRRERWLAGRALLSHT
                     LSPLPEIIYGEQGKPAFAPETPLWFNLSHSGDDIALLLSDEGEVGCDIEVIRPRANWR
                     WLANAVFSLGEHAEMDAVHPDQQLEMFWRIWTRKEAIVKQRGGSAWQIVSVDSTYHSS
                     LSVSHCQLENLSLAI"
     gene            complement(582..1631)
                     /locus_tag="JNZ57_001126"
     CDS             complement(582..1631)
                     /locus_tag="JNZ57_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HAY8827418.1"
                     /translation="METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFA
                     IVLNPLVTWFIRRGVQRPVAITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKELT
                     RKLFKLQEMLPFLNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVF
                     MLFEVRHVPYKMRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGVIVWLGLALM
                     GVQFALMWAVLAFLLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIG
                     NILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKL
                     AILLGPGRPKSRLPG"
     gene            1763..2980
                     /locus_tag="JNZ57_001127"
     CDS             1763..2980
                     /locus_tag="JNZ57_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417930.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8827419.1"
                     /translation="MPEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYV
                     HDVMGFSAFWAGLVISLQYFATLLSRPHAGRYADLLGPKKIVVFGLCGCFLSGLGYLT
                     AGLTASLPVISLLLLCLGRVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTY
                     GAMAMGAPLGVVFYHWGGLQALALIIMGVALVAILLAIPRPTVKASKGKPLPFRAVLG
                     RVWLYGMALALASAGFGVIATFITLFYDAKSWDGAAFALTLFSCAFVGTRLLFPNGIN
                     RIGGLNVAMICFSVEIIGLLLVGVATMPWMAKIGVLLAGAGFSLVFPALGVVAVKAVP
                     QQNQGAALATYTVFMDLSLGVTGPLAGLVMSWAGVPVIYLAAAGLVAIALLLTWRLKK
                     RPPEHVPEAASSS"
     gene            complement(2984..3541)
                     /gene="dcrB"
                     /locus_tag="JNZ57_001128"
     CDS             complement(2984..3541)
                     /gene="dcrB"
                     /locus_tag="JNZ57_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417929.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage sensitivity protein DcrB"
                     /protein_id="HAY8827420.1"
                     /translation="MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVN
                     LLDGKLSFSLPADMTDQSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKR
                     LEDQQRSRDPQLQVVTNKAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQ
                     ITLPADDQQKAQTTAENIINTLVIQ"
     gene            complement(3614..4279)
                     /locus_tag="JNZ57_001129"
     CDS             complement(3614..4279)
                     /locus_tag="JNZ57_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HAY8827421.1"
                     /translation="MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSILGFHTTW
                     GAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALA
                     HFNLFVARIATASFMAYALGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFF
                     IAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINAL
                     QAS"
     gene            4500..4745
                     /gene="tusA"
                     /locus_tag="JNZ57_001130"
     CDS             4500..4745
                     /gene="tusA"
                     /locus_tag="JNZ57_001130"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA"
                     /protein_id="HAY8827422.1"
                     /translation="MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIAD
                     DPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRKGG"
     gene            complement(4847..7045)
                     /gene="zntA"
                     /locus_tag="JNZ57_001131"
     CDS             complement(4847..7045)
                     /gene="zntA"
                     /locus_tag="JNZ57_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase
                     ZntA"
                     /protein_id="HAY8827423.1"
                     /translation="MSTPDNHGKKAPQFAAFKPLTTVQNANDCCCDGACSSSPTLSEN
                     VSGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVES
                     AVQKAGYSLRDEQAADEPQASRLKENLPLITLIVMMAISWGLEQFNHPFGQLAFIATT
                     LVGLYPIAHQALRLIKSGSYFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEG
                     WAASRARQGVSALMALKPETATRLRNGEREEVAINSLRPGDVIEVAAGGRLPADGKLL
                     SPFASFDESDLTGESIPVERATGDKVPAGATSVDRLVTLEVLSEPGASAIDRILKLIE
                     EAEERRAPIERFIDRFSRIYTPAIMAVALLVTLVPPLLFAASWQEWIYKGLTLLLIGC
                     PCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTQVAFDKTGTLTVGKPRVTA
                     IHPATGISESELLTLAAAVEQSATHPLAQAIVREAQVAALAIPAAESQRALVGSGIEA
                     QVNGERVLICAAGKHPADAFAGLINELESAGQTVVLVVRNDDVLGIIALQDTLRADAA
                     TAISELNALGVKGVILTGDNPRAAAAIAGELGLEFKAGLLPEDKVKAVTELNQHAPLA
                     MVGDGINDAPAMKAAAIGIAMGSGTDVALETADAALTHNHLRGLVQMIELARATHANI
                     RQNITIALGLKGIFLVTTLLGMTGLWLAVLADTGATVLVTANALRLLRRR"
     gene            complement(7119..7745)
                     /locus_tag="JNZ57_001132"
     CDS             complement(7119..7745)
                     /locus_tag="JNZ57_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysoplasmalogenase"
                     /protein_id="HAY8827424.1"
                     /translation="MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQ
                     APMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSF
                     FWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALS
                     AFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL"
     gene            7886..8245
                     /locus_tag="JNZ57_001133"
     CDS             7886..8245
                     /locus_tag="JNZ57_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2500 domain-containing protein"
                     /protein_id="HAY8827425.1"
                     /translation="MSKPPLFFIVIIGLIVVAASFRFMQQRREKADNDMAPLQQKLVV
                     VSNKREKPINDRRSRQQEVTPAGASMRYEASFKPQSGGMEQTFRLDAQQYHALTVGDK
                     GTLSYKGTRFVSFVGEQ"
     gene            complement(8248..8517)
                     /locus_tag="JNZ57_001134"
     CDS             complement(8248..8517)
                     /locus_tag="JNZ57_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1145 family protein"
                     /protein_id="HAY8827426.1"
                     /translation="MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMH
                     GMQLALLKSTLPKDGPQMTTAEKVRIFLFGVFELLVWQKKFKVKK"
     gene            complement(8507..9103)
                     /gene="rsmD"
                     /locus_tag="JNZ57_001135"
     CDS             complement(8507..9103)
                     /gene="rsmD"
                     /locus_tag="JNZ57_001135"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase"
                     /protein_id="HAY8827427.1"
                     /translation="MKKTNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLF
                     NWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGN
                     ARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEV
                     ENGLPTVPANWSLHREKVAGQVAYRLYQREAQGESDAD"
     gene            9253..10746
                     /gene="ftsY"
                     /locus_tag="JNZ57_001136"
     CDS             9253..10746
                     /gene="ftsY"
                     /locus_tag="JNZ57_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HAY8827428.1"
                     /translation="MAKEKKRGFFSWLGFGQKEQTPEKETEVQNEQPVVEEIVQAQEP
                     AKASEQAVEEQPQAHTEAEAETFAADVVEVTEQVAESEKAQPEAEVVAQPEPVVEETP
                     EPVAIEREELPLPEDVNAEEVSPEEWQAEAETVEIVEAAEEEAAKEEITDEELEAQAL
                     AAEAAEEAVMVVPPVEEQPVEEIAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLF
                     RGKKIDDDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMG
                     EILAKVDEPLNVEGKTPFVILMVGVNGVGKTTTIGKLARQFELQGKSVMLAAGDTFRA
                     AAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSH
                     LMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDG
                     TAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFARED"
     gene            10749..11417
                     /gene="ftsE"
                     /locus_tag="JNZ57_001137"
     CDS             10749..11417
                     /gene="ftsE"
                     /locus_tag="JNZ57_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HAY8827429.1"
                     /translation="MIRFEHVSKAYLGGRQALQGVTFHMQPGEMAFLTGHSGAGKSTL
                     LKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAI
                     PLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLL
                     ADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDINLISRRSYRMLTLSDGHLHGG
                     VGHE"
     gene            11410..12468
                     /gene="ftsX"
                     /locus_tag="JNZ57_001138"
     CDS             11410..12468
                     /gene="ftsX"
                     /locus_tag="JNZ57_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HAY8827430.1"
                     /translation="MNKRDAINHIRQFGGRLDRFRKSVGGSGDGGRNAPKRAKSSPKP
                     VNRKTNVFNEQVRYAFHGALQDLKSKPFATFLTVMVIAISLTLPSVCYMVYKNVNQAA
                     TQYYPSPQITVYLQKTLDDDAAAGVVAQLQAEQGVEKVNYLSREDALGEFRNWSGFGG
                     ALDMLEENPLPAVAVVIPKLDFQGTESLNTLRDRITQINGIDEVRMDDSWFARLAALT
                     GLVGRVSAMIGVLMVAAVFLVIGNSVRLSIFARRDSINVQKLIGATDGFILRPFLYGG
                     ALLGFSGALLSLILSEILVLRLSSAVAEVAQVFGTNFDINGLSFDECLLLLLVCSMIG
                     WVAAWLATVQHLRHFTPE"
     gene            12713..13567
                     /gene="rpoH"
                     /locus_tag="JNZ57_001139"
     CDS             12713..13567
                     /gene="rpoH"
                     /locus_tag="JNZ57_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007899894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HAY8827431.1"
                     /translation="MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYH
                     GDLEAAKTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLV
                     SFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARE
                     LGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWE
                     EQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMK
                     KLRAAIEA"
     gene            13838..14941
                     /locus_tag="JNZ57_001140"
     CDS             13838..14941
                     /locus_tag="JNZ57_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HAY8827432.1"
                     /translation="MNIKGKALLAGCIALAFSNMALAEDIKVAVVGAMSGPVAQYGDQ
                     EFTGAEQAVADINAKGGIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCS
                     SSTQPASDIYEDEGILMITPAATSPELTARGYQLILRTTGLDSDQGPTAAKYILEKVK
                     PQRIAIVHDKQQYGEGLARAVQDGLKKGNANVVFFDGITAGEKDFSTLVARLKKENID
                     FVYYGGYHPEMGQILRQARAAGLKTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYD
                     QVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQSDDPAEIAKYLKANSVDT
                     VMGPLTWDEKGDLKGFEFGVFDWHANGTATDAK"
     gene            complement(15140..15523)
                     /gene="panM"
                     /locus_tag="JNZ57_001141"
     CDS             complement(15140..15523)
                     /gene="panM"
                     /locus_tag="JNZ57_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase autocleavage activator
                     PanM"
                     /protein_id="HAY8827433.1"
                     /translation="MTLTIIRLENFSDQDRIDLQKIWPEYSPSSLQVDDNHRIYAARF
                     NERLLAAVRVTLSGTEGALDSLRVREVTRRRGVGQYLLEEVLRNNPGVSCWWMADAGV
                     EDRGVMTAFMQALGFTAQQGGWEKR"
     gene            15947..17056
                     /gene="livk"
                     /locus_tag="JNZ57_001142"
     CDS             15947..17056
                     /gene="livk"
                     /locus_tag="JNZ57_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter substrate-binding protein LivK"
                     /protein_id="HAY8827434.1"
                     /translation="MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDM
                     EFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCS
                     SSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVK
                     PQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENID
                     FVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD
                     QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGA
                     NTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK"
     gene            17104..18030
                     /gene="livH"
                     /locus_tag="JNZ57_001143"
     CDS             17104..18030
                     /gene="livH"
                     /locus_tag="JNZ57_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010436488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter permease LivH"
                     /protein_id="HAY8827435.1"
                     /translation="MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHG
                     EVYMIGSYVSFMIIAALMMMGIDTGWLLVAAGFVGAIVIASAYGWSIERVAYRPVRNS
                     KRLIALISAIGMSIFLQNYVSLTEGSRDVALPSLFNGQWVVGHSENFSASITTMQAVI
                     WIVTFLAMLALTIFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAV
                     AGVLLGQFYGVINPYIGFMAGMKAFTAAVLGGIGSIPGAMIGGLILGIAEALSSAYLS
                     TEYKDVVSFALLILVLLVMPTGILGRPEVEKV"
     gene            18027..19304
                     /locus_tag="JNZ57_001144"
     CDS             18027..19304
                     /locus_tag="JNZ57_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter permease LivM"
                     /protein_id="HAY8827436.1"
                     /translation="MKPMHIAMALLSAAMFFVLAGVFMGVQLELDGTKLVVDTASDIR
                     WQWVFIGTAVVFFFQLLRPAFQKGLKSVSGPKFILPAIDGSTVKQKLFLVALLVLAVA
                     WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYY
                     GLGFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGG
                     PNGISQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSL
                     FVINRLLRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQ
                     GFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEYSMLMLGG
                     LMVLMMIWRPQGLLPMTRPQLKLKNGAAKGEQA"
     gene            19301..20068
                     /gene="livG"
                     /locus_tag="JNZ57_001145"
     CDS             19301..20068
                     /gene="livG"
                     /locus_tag="JNZ57_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000084170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter ATP-binding protein LivG"
                     /protein_id="HAY8827437.1"
                     /translation="MSQPLLSVNGLMMRFGGLLAVNNVNLELYPQEIVSLIGPNGAGK
                     TTVFNCLTGFYKPTGGTILLRDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLL
                     VAQHQQLKTGLFSGLLKTPSFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQR
                     RLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVM
                     GISDRIYVVNQGTPLANGTPEQIRNNPDVIRAYLGEA"
     gene            20070..20783
                     /gene="livF"
                     /locus_tag="JNZ57_001146"
     CDS             20070..20783
                     /gene="livF"
                     /locus_tag="JNZ57_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312328.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter ATP-binding protein LivF"
                     /protein_id="HAY8827438.1"
                     /translation="MEKVMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGK
                     TTLLGTLCGDPRAASGRIVFDDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLA
                     MGGFFAERDQFQERIKWVYELFPRLHERRVQRAGTMSGGEQQMLAIGRALMSNPRLLL
                     LDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLS
                     DTGDALLANEAVRSAYLGG"
     gene            21180..22496
                     /gene="ugpB"
                     /locus_tag="JNZ57_001147"
     CDS             21180..22496
                     /gene="ugpB"
                     /locus_tag="JNZ57_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     substrate-binding protein UgpB"
                     /protein_id="HAY8827439.1"
                     /translation="MKPLHYTASALALGLALMGNAQAVTTIPFWHSMEGELGKEVDSL
                     AQRFNAENPDYKIVPTYKGNYEQNLSAGIAAFRTGNAPAILQVYEVGTATMMASKAIK
                     PVYDVFKEAGIQFDESQFVPTVSGYYSDSKTGHLLSQPFNSSTPVLYYNKDAFKKAGL
                     DPEQPPKTWQDLADYAAKLKASGMKCGYASGWQGWIQLENFSAWNGLPFASKNNGFDG
                     TDAVLEFNKPEQVKHIAMLEEMNKKGDFSYVGRKDESTEKFYNGDCAMTTASSGSLAN
                     IREYAKFNYGVGMMPYDGDAKDAPQNAIIGGASLWVMQGKDKETYTGVAKFLDFLAKP
                     ENAAEWHQKTGYLPITKAAYDLTREQGFYEKNPGADTATRQMLNKPPLPFTKGLRLGN
                     MPQIRVIVDEELESVWTGKKTPQQALDTAVERGNQLLRRFEKSTKS"
     gene            22594..23481
                     /gene="ugpA"
                     /locus_tag="JNZ57_001148"
     CDS             22594..23481
                     /gene="ugpA"
                     /locus_tag="JNZ57_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000099274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter permease
                     UgpA"
                     /protein_id="HAY8827440.1"
                     /translation="MSSSRPVFRSRWLPYLLVAPQLIITVIFFIWPAGEALWYSLQSV
                     DPFGFSSQFVGLDNFVTLFHDSYYLDSFWTTIKFSTFVTVSGLLVSLFFAALVEYIVR
                     GSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFL
                     VVFASVWKQISYNFLFFYAALHSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFL
                     LVVNLVYAFFDTFPVIDAATSGGPVQATTTLIYKIYREGFTGLDLASSAAQSVVLMFL
                     VIVLTVVQFRYVESKVRYQ"
     gene            23478..24323
                     /gene="ugpE"
                     /locus_tag="JNZ57_001149"
     CDS             23478..24323
                     /gene="ugpE"
                     /locus_tag="JNZ57_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000572177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter permease
                     UgpE"
                     /protein_id="HAY8827441.1"
                     /translation="MIENRPWLTIFSHTMLILGIAVILFPLYVAFVAATLDKQAVYAA
                     PMTLIPGTHLLENIHNIWVNGVGTNSAPFWRMLLNSFVMAFSITLGKITVSMLSAFAI
                     VWFRFPLRNLFFWMIFITLMLPVEVRIFPTVEVIANLKMLDSYAGLTLPLMASATATF
                     LFRQFFMTLPDELVEAARIDGASPMRFFCDIVFPLSKTNLAALFVITFIYGWNQYLWP
                     LLIITDVDLGTTVAGIKGMIATGEGTTEWNSVMAAMLLTLIPPVVIVLVMQRAFVRGL
                     VDSEK"
     gene            24325..25395
                     /locus_tag="JNZ57_001150"
     CDS             24325..25395
                     /locus_tag="JNZ57_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417907.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate import ATP-binding
                     protein UgpC"
                     /protein_id="HAY8827442.1"
                     /translation="MAGLKLQAVTKSWDGKTQVIKPLTLDVADGEFIVMVGPSGCGKS
                     TLLRMVAGLERVTEGDIWINDQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLK
                     IRGMGKQQIAERVKEAARILVLDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDE
                     PLSNLDAKLRVQMRLELQQLHRRLKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGT
                     PVEVYEKPASLFVASFIGSPAMNLLTGRVNNEGTHFELDGGIELPLNGGYRQYAGRKM
                     TLGIRPEHIVLSSQAEGGVPLVMDTLEILGADNLAHGRWGEQKLVVRLAHQERPTAGS
                     TLWLHLAENQLHLFDGETGQRV"
     gene            25392..26135
                     /gene="ugpQ"
                     /locus_tag="JNZ57_001151"
     CDS             25392..26135
                     /gene="ugpQ"
                     /locus_tag="JNZ57_001151"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HAY8827443.1"
                     /translation="MSNWPYPRIVAHRGGGKLAPENTLAAIDVGAKYGHKMIEFDAKL
                     SKDGEIFLLHDDNLERTSNGWGVAGELNWQDLLRVDAGSWYSKAFKGEPLPLLSQVAE
                     RCREHGMMANIEIKPTTGTGPLTGKMVALAARQLWAGMTPPLLSSFEIDALEAAQLAA
                     PELPRGLLLDEWRDDWRELTARLGCVSIHLNHKLLDKARVMQLKDAGLRILVYTVNKP
                     QRAAELLRWGVDCICTDAIDVIGPNFTAQ"
     gene            complement(26122..26562)
                     /locus_tag="JNZ57_001152"
     CDS             complement(26122..26562)
                     /locus_tag="JNZ57_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2756 family protein"
                     /protein_id="HAY8827444.1"
                     /translation="MKRLLILTALLPFVGFAQPINTLNNPNQPGYQIPSQQRMQTQMQ
                     TQQIQQKGMLNQQLKTQTQLQQQHLENQINNNSQRVLQSQPGERNPARQQMLPNTNGG
                     MLNSNRNPDSSLNQQHMLPERRNGDMLNQPSTPQPDIPLKTIGP"
     gene            26682..28415
                     /gene="ggt"
                     /locus_tag="JNZ57_001153"
     CDS             26682..28415
                     /gene="ggt"
                     /locus_tag="JNZ57_001153"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HAY8827445.1"
                     /translation="MIKPTFLRRVAIAALLSGSCFSAVAAPPVSYGVEEDIFHPVRAK
                     QGMVASVDATATQVGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRSKN
                     GNTTAIDFREMAPAKATRDMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDKYGT
                     MPLNKVVQPAFKLARDGFIVNDALADDLKTYGSEVLPNHENSKAIFWKEGEPLKKGDK
                     LVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERTPIS
                     GDYRGYQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADR
                     SEYLGDPDFVKVPWQALTNKAYAKSIADQIDINKAKPSSEIRPGKLAPYESNQTTHYS
                     VVDKDGNAVAVTYTLNTTFGTGIVAGESGILLNNQMDDFSAKPGVPNVYGLVGGDANA
                     VGPNKRPLSSMSPTIVVKDGKTWLVTGSPGGSRIITTVLQMVVNSIDYGMNVAEATNA
                     PRFHHQWLPDELRVEKGFSPDTLKLLEAKGQKVALKEAMGSTQSIMVGPDGELYGASD
                     PRSVDDLTAGY"
     gene            complement(28453..28737)
                     /locus_tag="JNZ57_001154"
     CDS             complement(28453..28737)
                     /locus_tag="JNZ57_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827446.1"
                     /translation="MITYHDAFAKANHYLDDADLPVVITLHGRFSQGWYFCFEAREFL
                     ETGDEAARLAGNAPFIIDKDSGEIHSLGTAKPLEEYLQDYEIKKATFGLP"
     gene            complement(28937..29092)
                     /locus_tag="JNZ57_001155"
     CDS             complement(28937..29092)
                     /locus_tag="JNZ57_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827447.1"
                     /translation="MEKLTTELHSLSEMDRRHVVSILAEIANGYDDFNDILIYLEFYP
                     NHKILIS"
BASE COUNT         6837 a         7454 c         8096 g         6848 t
ORIGIN      
        1 cagatcgcaa ggcttaaatt ttctagctga caatggctga ctgacagcga ggagtgatag
       61 gtgctatcta cgctgacgat ttgccaggcg ctgccgccac gctgtttaac gatggcttct
      121 ttgcgcgtcc agatgcgcca gaacatttcc agttgctgat caggatgcac ggcgtccatt
      181 tcagcgtgtt ccccgaggct gaacacggcg ttcgccagcc agcgccagtt ggcgcgcggg
      241 cgaatcactt cgatatcgca gccgacttcg ccttcatcgc tcaacagcag agcgatatcg
      301 tcaccgctat ggcttaagtt gaaccatagc ggcgtttccg gcgcgaatgc aggtttgcct
      361 tgttcgccat agatgatctc cggtagcggg gaaagcgtgt gcgaaagcaa tgcacgcccc
      421 gccagccagc gttcgcgtcg tggaccttgc ggtgcttgct cgcgtaaacc cggtggcagt
      481 ggagctgcgc ttaaggtcga aactttcccc agaactatcc gatacatatc agggccaacg
      541 tttaatggaa aatgaaagtg cgtatcgtat cacttgtcgc ctcatcccgg taaccgactt
      601 ttcggtctgc ctggccccag taaaatcgcc agtttgctac cgcctttggt ggtttccatc
      661 cagattttac acacgctggt taatggcacc gaaagtagca tccctaccgg gccgagcagc
      721 catccccaaa ttaacaatga aagaaatacc accatggtgg acatccccag gcgatggccc
      781 atcatccgtg gttctaaaat attgccgatg accatatgga ccactaaaaa caatgcgccg
      841 accagaatac attcgtaaac accattaaac agcagcacct gaatcattgg cggtacggcg
      901 gaaattaccg cgccgatatt gggcacgtag ttgagcaaaa acgccagtac tgcccacatc
      961 agcgcaaact gtacgcccat tagcgccagc cccagccaga cgatgacacc tgtccataaa
     1021 ctgagtagcg tctttaacgc cagataatgc gaaacgcctt taagtgcgcg gtgtaatcct
     1081 gcgatgtgaa tctgtgggtt attcagcgca aaacgcattt tgtaagggac gtggcgcact
     1141 tcaaacagca taaaaactac ggtcatcacc agcaaaagca cgctcgccat tgccccggaa
     1201 agcccggtca ttagcgctgt ggtgaaggta accacttttt ccgagtccat ccgctgcagc
     1261 attcgctccg gcgacatatg caaattaaga aaaggcaaca tctcctgcaa tttaaaaagt
     1321 ttgcgcgtca gctccttatt aaacttcggc agcatagaga taaattcgtt aaacgatgcc
     1381 gccagtacgc cgaccagcgc ggttagtgcg atcagcatca ccaccactac aatcgtaatg
     1441 gcaacggggc gttgtactcc ccgacgaata aaccaggtaa cgagcgggtt gaggacgatg
     1501 gcaaaaaaca gcgccagtaa cagctgcaca atgatatctg ccgctgcgtg aatgcccgcg
     1561 aggatcacta ccagcgaggc caacttgagc agaatgtgca tgcccgtttt atcgggttga
     1621 ggggtttcca ttggggcttc cttgtgactt tttgtgttaa gtgtagcggg agtcacgcca
     1681 gcaatattct gattcttact gctgattttc acgtcagcac gtggtaaaaa tgaaacactg
     1741 ttgtaaaaat gtggtgatcc tcatgcccga acccgtagcc gaacccgcgc taaacggatt
     1801 gcgcctgaat ttgcgcattg tctccattgt catgtttaac ttcgccagct acctcaccat
     1861 cgggttgccg ctcgctgtat taccgggcta tgtccatgat gtgatgggct ttagcgcttt
     1921 ctgggcagga ttggttatca gcctgcaata tttcgccacc ttgctgagcc gtcctcatgc
     1981 cggacgttac gccgatttgc tgggccccaa aaagattgtc gtcttcggtt tatgcggctg
     2041 ctttttgagc ggtctgggat atctgacggc aggattaacc gccagtctgc ccgtcatcag
     2101 cctgttatta ctttgcctgg gacgcgtgat ccttgggatt gggcaaagtt ttgccggaac
     2161 gggatcgacc ctgtggggcg ttggcgtggt tggctcgctg catatcgggc gagtgatttc
     2221 gtggaacggc attgtcactt acggggcgat ggcgatgggt gcgccgttag gcgtcgtgtt
     2281 ttatcactgg ggcggcttgc aggcgttagc gttaatcatt atgggcgtgg cgctggtggc
     2341 cattttgttg gcgatcccgc gtccgacggt aaaagccagt aaaggcaaac cgctgccgtt
     2401 tcgcgcggtg cttgggcgcg tctggctgta cggtatggca ctggcactgg cttctgccgg
     2461 atttggcgtc atcgccacct ttatcacgct gttttatgac gctaaaagtt gggacggtgc
     2521 ggctttcgcg ctgacgctgt ttagctgtgc gtttgtcggt acgcgtttgt tattccctaa
     2581 cggcattaac cgtatcggcg gcttaaacgt agcgatgatt tgctttagcg ttgagataat
     2641 cggcctgcta ctggttggcg tggcgactat gccgtggatg gcgaaaatcg gcgtcttact
     2701 ggcgggggca gggttttcgc tggtgttccc ggcattaggt gtagtggcgg taaaagcggt
     2761 tccgcagcaa aatcaggggg cggcgctggc aacttacacc gtatttatgg atttatcgct
     2821 tggcgtgacc ggaccactgg ctgggctggt gatgagctgg gcgggcgtac cggtgattta
     2881 tctggcggcg gcgggactgg tcgcaatcgc gttattactg acgtggcgat taaaaaaacg
     2941 gcctccggaa cacgtccctg aggccgcctc atcatcttaa aacttactga ataaccagcg
     3001 tattaatgat gttttctgcg gtggtctgcg ctttttgctg atcgtcagcg ggcagcgtaa
     3061 tttgcatggt cagcagttga ttacccacgt tacccagaat aacggaagag tacgccgtct
     3121 ggcctttcgc ggagataata ctgtctaact gctgcatttt gtgacctttc agctcaatgg
     3181 ctttattggt taccacttgc agctgcggat cgcggctacg ttgctgatct tccagacgct
     3241 tcgccagcac cgccagatct tctttcggat catcgcccat gatgacgatg actgctttct
     3301 gcccggtggc gtcggaccag acatgcatgt tattggcctg cgttcccagc ttaccgctct
     3361 ggtcggtcat atccgctggc agcgagaaac ttaacttgcc atcaagcagg ttgacgggat
     3421 tcccggtagc gttactttcc gcgaccgaac cctgcgccgt agcgttagtg tctttatcat
     3481 cacaggccgc aagccccata accagcaggc caattccgac atatttaacc agattgcgca
     3541 ttgacttctt cctttcgata aacggccata acggctcatt catccatctt atcacaactc
     3601 tgataacgaa cctttaactc gcctgcaaag cgttgatttc ggatttatct gccagtcttt
     3661 tcaacagcat attgagtaat acgccataca ttggcaggaa gaaaacgata ctgattaaca
     3721 ctttgaaaca gtaatcgacc agcgcgattt ccatccagtg ttcagccata aaggcatccg
     3781 ggctacgcca gaaggcaatg aagaaaaagg ccagcgtgtc gctgacgtta ccgaacagtg
     3841 tggacgctgt cggtgccagc caccagcggc gactctgacg caggcggtta aaaacgtgca
     3901 cgtcgaggat ctgtcccagc gcgtaggcca tgaaactggc ggtggcgata cgggcgacaa
     3961 acaggttgaa gtgggcgagt gcgccgaatc cctgccagga acccatatag aatagcgacg
     4021 agatgacgta ggagatcagc aacgccggga tcatcaccgc aaagatgata cgacgggcca
     4081 gcggtgcgcc aaaaatacgc acggtcaggt cggtagcaag gaaaataaac gggaagctaa
     4141 acgcgcccca ggtggtatgg aaacccaaaa tggagacggg aagctgaacc agatagttac
     4201 tggaggtgat caccagcaga tgaaataacg ataaccagaa caacgcctta tagcgttgag
     4261 tttgcgagaa aacgttcata ttgtaccttt ttgattaacc attggggtga gggaacccaa
     4321 tacgtacgac acgtctgtta ccttaacata ataacgtgct tacccttttt tcgagccgcc
     4381 gcatgatact gctttacgtt gacaatgcaa tggttaattt tcacgcaatc gttaacctgg
     4441 tttgcttacg gactcacagg gcgtaaacta gcgccgtttt tttatgtgat gagaagaaaa
     4501 tgaccgatct cttttccagc cctgaccaca cactcgacgc acttggcctg cgctgcccgg
     4561 aacccgtaat gatggtgcgc aaaactgtgc gcaatatgca gcccggcgaa acgttgctga
     4621 ttatcgccga cgatccggcc actacccgcg atattcctgg gttttgtacc tttatggaac
     4681 acgaactggt tgcgaaagag acggatggac tgccttatcg ttatttgatt cgtaaaggcg
     4741 gttgatgggg gctgattggc ttcgatgccg ccttttcccc tcaccctaac cctctcccca
     4801 gaggggcgag gggaccgatc gcgctcaata ttgcgatcgg tttgccttat ctcctgcgca
     4861 acaatcttaa cgcattcgct gtcaccagca ccgtcgcacc cgtatctgcc agcaccgcca
     4921 gccatagtcc ggtcatccct aaaagcgtgg tgacgaggaa gatccctttc agtcccagcg
     4981 caatggtgat gttctggcgg atattggcgt gagtggcgcg tgccagttca atcatttgca
     5041 ccaggccgcg caggtggtta tgggttaatg ctgcatcagc ggtttccagc gccacgtctg
     5101 tgccactgcc cattgcaatc ccaatggcgg cagctttcat cgctggcgcg tcgttaatac
     5161 cgtcaccgac catcgccagc ggcgcatgtt gattcagctc ggtcaccgct ttgactttat
     5221 cttccggcaa caggcccgct ttaaactcca gccccagctc cccggcaatt gccgccgctg
     5281 cgcgtggatt atcgccggtg aggatcaccc ctttgacgcc cagcgcgttc agttcactga
     5341 tggcagttgc agcatcggcg cgcagggtat cctgcaatgc aatgataccc agcacgtcat
     5401 cattacgtac taccagcaca accgtttgcc cggcgctttc cagttcatta atcaaaccag
     5461 caaatgcatc agcgggatgt ttcccggcag cgcatatcaa cacgcgctca ccgttaacct
     5521 gcgcttcaat gccagacccg accagcgccc gctgtgattc ggcggcggga atggcgagtg
     5581 cagcaacctg tgcttcgcgc acgatggcct gcgccagtgg atgcgtcgcg ctttgctcga
     5641 ccgccgccgc cagtgtcagc agttcagatt cactaatacc cgttgccgga tgaatcgcgg
     5701 taacgcgcgg tttaccgacg gtcagcgtac cggttttatc aaacgccacc tgagtaacac
     5761 gacctagttg ttccagcgcc gctccgcctt taatcaacgc cccacgacgc gctgctgccg
     5821 ccagcccgga ggtaatcgcc gcgggcgtgg agataactaa cgcacacggg cagccaatca
     5881 gcagcagcgt caggccttta taaatccact cctgccagct ggcggcaaac agcagcggtg
     5941 gcaccagcgt caccagcagg gcgacggcca taatcgctgg cgtataaata cggctgaaac
     6001 ggtcgataaa ccgctcaatg ggggcgcggc gctcttcggc ttcttcgatc agtttcagaa
     6061 tccggtcaat ggcgctggca cccggttctg acagcacttc cagcgttacc agacggtcta
     6121 cgctggtggc tcctgcagga actttatcgc ccgtcgcgcg ctccaccgga atggattctc
     6181 cggtcaggtc gctttcatca aaactggcaa acggtgagag cagtttaccg tcggcaggca
     6241 aacgcccacc tgcggcgact tcaatcacat cgccaggccg caggctgtta atcgccacct
     6301 cttcccgctc accgttacgc aggcgcgtgg cggtttctgg tttcagcgcc attaacgcgc
     6361 taacgccctg acgcgcgcgg ctggcggccc agccttccag tcgttcacca atcaaaaaca
     6421 gcagcaacac catcgcagct tcagccgttg cgccaataaa cagtgcacca atagcggcta
     6481 cgctcattaa ggtttcaatg gcgaagtagc tgccggattt gatcagccgt aatgcctgat
     6541 gagcaatcgg gtacagccca accagcgtgg tcgcgataaa cgccagttgc ccgaacggat
     6601 gattgaactg ctccagaccc cagctgattg ccatcatcac gattagtgta atcagcggca
     6661 gattctcttt caggcgcgat gcttgtggct cgtcggcggc ctgctcatcg cgcagggaat
     6721 agcccgcttt ttgcaccgca gattcaactt gtgcacgaat gtcattgtcg gcatcaacca
     6781 ccagtttttc ggtggcgaac aacacctgca cctgattcac acctgcaagc tggcgcacgg
     6841 cattttctac cttgcgcgca caggcggcgc agtccatgcc actgactttc cagctatagc
     6901 gggtgccgga gacgttttca gagagcgttg gcgagctgga gcatgcgccg tcgcagcaac
     6961 agtcgttggc gttctgtacc gtggttagcg gtttgaacgc agcaaattga ggggctttct
     7021 tgccgtgatt gtcaggtgtc gacatggcat actccggtta agttttttct cattaaccga
     7081 aggatacact ctggagtcga ctccagagtc aagttttatc agagatacag tgagcggacg
     7141 atgaggaagt gaccggcaaa gtagcaggcc gcagcaatcg cgttatccgc acggaagcgt
     7201 cggcgatagt ggctccccag ccagacaaag ttactgataa acagcaacga agcgccaaca
     7261 aacgcagaga gcgccggagc ggtcggacgg aagaaccaca gttcacctgc cagccacacc
     7321 atcaccagcg tcatgccgat aaacgtgcag ataggccaac gatactcttc cagccgcgtc
     7381 cagataatcg ccagtaacag cgcacccaga accagcaaca ccagtggcag aggccagaag
     7441 aaagagagcg tcatctgact ggcgaaatag atggtgtaca gcaggtgcga gaggaaaaac
     7501 gcgccgatgg cgtacatcag acgttgacgt ggcaacaggg ttagcgcatc gcccagcagt
     7561 gaggcgcaca gccctgccag caccagatag ctaatggcgt cgaacatcgg cgcttgccag
     7621 gccagtaaca gcaggagaag aagggttaac ggtttaaaca cccagcgttg ccaggttggc
     7681 ccacgatacg atgcatccac agatagccat gcggaaagac agacagcgat aaacgaccaa
     7741 agcatcttag ttccttgaat tcgttatttt ttcgtaagcg gaatgcctac ggtcttgctt
     7801 ccagtttagt ggcgagggtg gacggatgac aacaccataa ctggcagggt atgcttattt
     7861 ccgcattttc cgatgaggga taaagatgag caaaccacct cttttcttta ttgttatcat
     7921 tggcttaatt gtcgtcgccg catcgtttcg ttttatgcaa cagcgacggg aaaaagctga
     7981 taatgatatg gctccgctcc agcaaaagct ggtggtggtg agcaacaagc gggaaaaacc
     8041 gattaacgat cgccgttcgc gccagcagga agtgactccg gcaggcgcca gtatgcgcta
     8101 tgaggcaagc ttcaaaccgc aaagcggagg aatggagcag acgtttcgcc tcgacgccca
     8161 gcagtaccat gccctgacag tgggcgataa aggtacgctg agctataaag gaacgcgctt
     8221 tgttagcttt gttggcgaac aataaggtta ttttttaact ttaaatttct tctgccagac
     8281 cagcagttca aacacgccga aaaggaaaat ccgcaccttt tcggcggtgg tcatctgcgg
     8341 gccatctttc ggtaaagtgg atttcaatag cgccagctgc ataccatgca tcagcacggt
     8401 aaaaatcagc gccacgttaa cgaaaatatt cagcgggcgc gggaagggat gcaccagatt
     8461 gaggattaaa aatccccaaa cgcagagcat taacaaacga ccaatattaa tcagcatcac
     8521 tttctccttg tgcttcgcgt tgatacagcc gataagccac ctgacccgcc actttttccc
     8581 gatgtaatga ccagtttgcc ggaacagtgg gcagaccgtt ttcgacttcg ctttcgacat
     8641 aaatcagggc ttcgtcagcc agccagccgt tatcttccag taaatttatc gtctcttcta
     8701 acaagccacg gcggaacggt ggatcgacaa acacgatatt atgcggtgta cctttttgcg
     8761 ccaggaatga catcgcgttg ctgttcacca cgcgtgcatt gcctgctttt agtgtcgcca
     8821 gattcttaat taactgctga gaaaccgcgc gatccatctc aatcaacgtg gcccccgcag
     8881 cgtagcgcga taacgcttcc agtcccagcg cgccgctccc ggcgaagcaa tccagacatt
     8941 gggcgtcaac aatgaccgga gccagccagt taaacaacgt ttcgcgtacg cggtcggtgg
     9001 tggggcgcag acctgggcta tcaggaaccg ggagtttacg gcctcgccac tgcccgccaa
     9061 taatgcggat ttggccgctg ccggaatgat tcgttttttt catgataaat tgctcaatcc
     9121 gccagataac acatacttgc aggcggtgat gtgaattaag ttaagtgata gactatttca
     9181 tcattttttt agctgctatg tacatagcgt taacgctgtg ccatgaagca acagcgagga
     9241 gtgtagtcgc aaatggcgaa agaaaaaaaa cgtggctttt tttcctggct gggctttggt
     9301 caaaaagagc agaccccgga aaaagagaca gaagttcaga atgaacaacc ggttgtagaa
     9361 gaaatcgttc aggcgcaaga gcctgcgaag gcttctgaac aagccgtcga agagcaaccg
     9421 caggcgcata ctgaagccga ggcggaaact tttgctgccg acgttgtgga agtcactgaa
     9481 caggttgctg aaagtgaaaa agcgcagcct gaagcggaag tcgttgcaca gccggaaccg
     9541 gtcgtagaag aaacgccgga gccagtggct atcgaacgtg aagagctgcc gttgccggaa
     9601 gacgtcaacg ccgaagaggt ttcgccagaa gagtggcagg ctgaagcgga aaccgtagag
     9661 attgtcgaag cggcggaaga agaagcggct aaagaagaaa tcaccgacga agagctggaa
     9721 gcacaggcgc tggctgccga agcggcagaa gaggcggtga tggtggttcc tccggtagaa
     9781 gagcagccgg tggaagaaat cgctcaggag caggaaaaac cgaccaaaga aggtttcttc
     9841 gcgcgcctga aacgcagcct gttaaaaacc aaagaaaatc tcggttccgg atttatcagc
     9901 ctgttccgcg gtaaaaaaat cgacgatgat ctgtttgagg agctggaaga acagctgttg
     9961 atcgccgatg tgggcgtgga aaccacacgt aaaattatca ccaatctgac ggaaggcgca
    10021 tcccgcaagc agcttcgtga tgccgaggcg ctctatggcc tgctgaaaga agagatgggc
    10081 gagattctgg cgaaagtcga tgagccgctg aatgttgaag gtaaaacgcc gttcgtgatc
    10141 ctgatggtgg gcgtcaacgg tgtgggtaaa actacgacga ttggtaagct ggcacgtcag
    10201 tttgagctgc agggtaaatc ggtgatgctg gcggcgggcg atactttccg tgcagcagcg
    10261 gttgaacagc ttcaggtctg gggtcagcgc aacaatattc cggtgattgc ccagcatacc
    10321 ggtgcggatt ccgcctctgt tatcttcgac gccattcagg cagctaaagc gcgtaatatc
    10381 gacgtcctga ttgccgatac cgccggacgc ctgcagaaca aatcgcacct gatggaagag
    10441 ttgaagaaaa tcgtccgcgt gatgaagaaa ctcgacgttg aagcgccgca tgaagttatg
    10501 ctgactattg atgccagtac cgggcagaat gcggtaagcc aggccaaact gttccacgaa
    10561 gccgttggct taaccggcat cacgctaacg aaactggacg gcacggcgaa aggcggggta
    10621 attttctcgg tggctgacca gtttggtatc cctatccgct acattggtgt cggcgaacgt
    10681 attgaggatt tgcgtccgtt taaggcggac gactttatag aggcactttt tgcccgagag
    10741 gattaacaat gattcgcttt gaacatgtca gcaaggctta tctcggtggg agacaggcgc
    10801 tgcagggcgt tacgttccat atgcagccgg gtgagatggc gtttctgacc ggtcattccg
    10861 gcgcagggaa aagtaccctc ctgaagctga tctgtgggat tgagcggccc agcgccggga
    10921 aaatctggtt tagcggccat gacatcacgc gtctgaaaaa ccgtgaagtt ccgtttctgc
    10981 gccgccagat tggcatgatt ttccaggatc accatctact gatggaccgt actgtctacg
    11041 ataacgtggc gatcccgctg attatcgctg gtgccagcgg tgacgatatt cgtcgccggg
    11101 tgtcggcggc actggataaa gtcgggctac tggacaaagc gaagaacttc cctattcagc
    11161 tttccggcgg tgaacaacag cgtgttggca ttgcccgcgc ggtggtgaat aagcccgcgg
    11221 tactgctggc ggacgaaccg accggtaacc tggacgacgc gttgtcggaa gggattctac
    11281 gtctgtttga agagtttaac cgcgttgggg taaccgtatt gatggcaacg cacgacatca
    11341 acctgatttc acggcgttcc tatcgcatgc tcaccctgag cgatggtcac ttgcatggag
    11401 gcgtgggcca tgaataagcg cgatgcaatc aatcatattc ggcagtttgg tgggcgtctg
    11461 gatcgcttcc gtaaatcggt cggcggctca ggcgacggcg gtcgtaacgc accgaaacgc
    11521 gcgaaatcct cgccaaaacc ggtaaatcgc aaaaccaacg ttttcaacga acaggtgcgc
    11581 tatgccttcc acggcgcatt gcaggatctg aaaagcaaac cgttcgccac gtttttaacg
    11641 gtgatggtta tcgccatctc cctgacgctg cccagcgtct gttatatggt gtacaaaaac
    11701 gttaatcagg cggcgacgca gtattatccg tcaccgcaaa tcactgttta cttgcaaaaa
    11761 acgctggacg atgacgccgc tgcgggcgtg gtggcacagt tgcaggccga gcaaggcgtg
    11821 gagaaagtga actatctttc tcgtgaagac gcactgggcg agttccgtaa ctggtctggt
    11881 tttggtggtg cgctggatat gctggaagaa aacccgcttc cggcagtggc ggtggtgatc
    11941 ccgaaactcg attttcaggg gacggaatca ctcaatacgc tgcgtgatcg tatcacgcag
    12001 attaacggca ttgacgaagt gcggatggat gacagctggt ttgcccgtct ggcggcgttg
    12061 accgggctgg tcgggcgcgt ttcggcgatg atcggcgtgt tgatggtggc ggcagtgttc
    12121 ctcgtcatcg gcaacagcgt acgtctgagc atctttgctc gccgtgactc catcaacgtg
    12181 cagaaactga ttggtgcgac ggatggtttc atccttcgcc cgttcctgta tggtggcgca
    12241 ctgctgggat tttctggcgc attgttgtca ttaattttgt cagaaattct ggtgctgcga
    12301 ttgtcatcgg cggttgcgga agtggcacag gttttcggaa cgaattttga tatcaatggt
    12361 ttatcgttcg atgaatgcct gctattgctg ctggtatgct cgatgattgg ctgggtggca
    12421 gcgtggcttg ccacggtaca acatttacgc cactttacgc ctgaataata aaagcgtgtt
    12481 atactctttc cctgcaatgg gttccgtagc agggaaagag atcccgttgt ctcttcccgg
    12541 tatttcatct ctatgtcaca ttttgtgcgt aatttattca caagcttgca ttgaacttgt
    12601 ggataaaatc acggtctgat aaaacagtga atgataacct cgttgctctt aagctctggc
    12661 acagttgttg ctaccactga agcgccagaa gatatcgatt gagaggattt gaatgactga
    12721 caaaatgcaa agtttagctt tagccccagt tggcaacctg gattcctaca tccgggcagc
    12781 taacgcgtgg ccgatgttgt cggctgacga ggagcgggcg ctggctgaaa agctgcatta
    12841 ccatggcgat ctggaagcag ctaaaacgct gatcctgtct cacctgcggt ttgttgttca
    12901 tattgctcgt aattatgcgg gctatggcct gccacaggcg gatttgattc aggaaggtaa
    12961 catcggcctg atgaaagcag tgcgccgttt caacccggaa gtgggtgtgc gcttggtctc
    13021 cttcgccgtt cactggatca aagcagagat ccacgaatac gttctgcgta actggcgtat
    13081 cgtcaaagtt gcgaccacca aagcgcagcg caaactgttc ttcaacctgc gtaaaactaa
    13141 gcagcgtctg ggctggttta accaggatga agtcgaaatg gtggcccgtg aactgggcgt
    13201 aaccagcaaa gacgttcgtg agatggaatc acgtatggcg gcacaggaca tgacctttga
    13261 cctgtcttcc gacgacgatt ccgacagcca gccgatggca ccggtgctct atctgcagga
    13321 taaatcatct aactttgccg acggcatcga agatgataac tgggaagagc aggcggcaaa
    13381 ccgtctgacc gacgcgatgc aaggtctgga cgaacgcagc caggacatca tccgcgcgcg
    13441 ctggctggac gaagacaaca agtccacgtt gcaggaactg gctgaccgtt acggtgtttc
    13501 cgctgaacgt gtacgccagc tggaaaagaa cgcgatgaaa aaactgcgcg ctgctataga
    13561 agcgtaattt ccgctattaa gcagagaacc ctggatgaga gtccggggtt tttgtttttt
    13621 gggcctctac aataatcaat tccccctccg gcaaaacgtc aatccccacg cagattgtta
    13681 ataaactgtc aaaatagcta ttccaatatc ataaaaatgg ggtatgtttt agcagagtat
    13741 gctgctaaag cacgggtagt tatgcataaa acgaaataaa gtgctgaatc acaacgccac
    13801 aacacacgta ataaccagaa gaatggggat tctcaggatg aatataaagg gtaaagcgtt
    13861 actggcagga tgtatcgcgc tggcattcag caatatggct ctggcagaag atattaaagt
    13921 cgcggtcgtg ggcgcaatgt ccggtccggt tgcgcagtac ggtgaccagg agtttaccgg
    13981 cgcagagcag gcggttgcgg atatcaacgc taaaggcggc attaaaggca acaaactgca
    14041 aatcgtaaaa tatgacgatg cctgtgaccc gaaacaggcg gttgcggtgg cgaacaaagt
    14101 cgttaacgac ggcattaaat atgtgattgg tcacctctgt tcttcatcaa cgcagcctgc
    14161 gtctgatatc tacgaagacg aaggcatttt aatgatcacc ccagcggcaa cctcgccgga
    14221 gctgaccgcc cgtggctatc agctgatcct gcgcaccacc ggcctggact ccgaccaggg
    14281 gccgacggcg gcgaaatata ttcttgagaa agtgaaaccg cagcgtattg ctatcgttca
    14341 cgacaaacag caatacggcg aaggtctggc gcgagcggtg caggacggcc tgaagaaagg
    14401 caatgctaac gtggtgttct ttgatggtat caccgccggg gaaaaagatt tctcaacgct
    14461 ggtggcgcgt ctgaaaaaag agaatatcga cttcgtttac tacggcggtt atcacccgga
    14521 aatggggcaa atcctgcgtc aggcacgcgc ggcagggctg aaaactcagt ttatggggcc
    14581 ggaaggtgtg gctaacgttt cgctgtctaa cattgcgggc gaatcagcgg aagggctgct
    14641 ggtgaccaag ccgaagaact acgatcaggt tccggcgaac aaacccattg ttgacgccat
    14701 caaagcgaaa aaacaggacc caagcggcgc attcgtttgg accacctacg ccgcgctgca
    14761 atctttgcag gcgggcctga atcagtctga cgatccggct gagatcgcca aatacctgaa
    14821 agcgaactcc gtggataccg tgatgggtcc gctgacgtgg gatgagaaag gtgatctgaa
    14881 aggctttgag ttcggcgtat ttgactggca cgccaacggc acggcgaccg atgcgaagta
    14941 atcattaatc ggcaactttg ggttgccgcc aaattgctaa tatcgagtac gttgcttcat
    15001 gccggatgcg gcgtaaacgc cttatccggc ctacaagatc caaagaaatc agtaaattgc
    15061 aacacacatt gtaggcctga taagcgtagc gcatcaggca atttctcgtt ggtcatcact
    15121 tttgaaatca acttgacgat taacgcttct cccagccgcc ctgttgcgcc gtaaatccca
    15181 gtgcctgcat aaacgccgtc atcacaccgc gatcttccac gcctgcatcc gccatccacc
    15241 agcatgaaac gccaggattg ttacgcaaaa cctcttccag cagatattgc cccacaccgc
    15301 gacgtcgggt gacttcccgc acacgcaggg aatccagtgc tccctcggtg ccgcttaagg
    15361 ttacccgtac ggcagcgagc aggcgctcgt taaaacgcgc ggcgtagata cggtggttat
    15421 cgtcaacctg taaagaggaa ggggaatact ccggccagat cttttgcagg tcaatccggt
    15481 cctggtcgct aaagttttct aatcgaatga tagtcagcgt catgggtaac ccgtgtaaat
    15541 cacaaaagtg gaaccagtgt agcgaaataa tttaatcgga ggctttctct tttttatttc
    15601 ttttggcagg tgattaattt tttaacagca ataattacaa agttaaaaca ttagagaatg
    15661 aaaaataccc agcataatcc cctgaatggt agtgaattat tccgcccttt gtgccgttat
    15721 tttatgctga caaaggcact tttttctgtt tatctatcaa taaattcaga atattatctg
    15781 ttcttaatcg actgaaagat agggatttta atcactatta tcacaaaata ctgcgctaaa
    15841 cccttaatca gacaggcaaa aacagtgcag tataaaaaaa gaacagtctg atttgttaac
    15901 acataaaaac aaagcaacac aacatcacga atggggattt ttgactatga aacggaatgc
    15961 gaaaactatc atcgcaggga tgattgcact ggcaatttca cacaccgcta tggctgacga
    16021 tattaaagtc gccgttgtcg gcgcgatgtc cggcccgatt gcccagtggg gcgatatgga
    16081 atttaacggc gcgcgtcagg cgattaaaga cattaatgcc aaagggggaa ttaagggcga
    16141 caagctggtt ggcgtggaat atgacgacgc ctgcgacccg aaacaagccg ttgcggtcgc
    16201 caacaaaatc gttaatgacg gcattaaata cgttattggt catctgtgtt cttcttctac
    16261 ccaacctgca tcagatatct acgaagacga aggtattctg atgatctcac cgggagcgac
    16321 caacccggag ctgacccaac gcggttatca acacattatg cgtactgccg ggctggactc
    16381 ttcccagggg ccaacggcgg caaaatacat tcttgagacg gtgaagcccc agcgcatcgc
    16441 catcattcac gacaaacaac agtatggcga agggctggcg cgttcggtgc aggacgggct
    16501 gaaagcggct aacgccaacg tcgtcttctt cgacggtatt accgccgggg agaaagattt
    16561 ctccgcgctg atcgcccgcc tgaaaaaaga aaacatcgac ttcgtttact acggcggtta
    16621 ctacccggaa atggggcaga tgctgcgcca ggcccgttcc gttggcctga aaactcagtt
    16681 tatggggccg gaaggtgtgg gtaacgcatc attgtcgaat attgccggtg atgctgccga
    16741 aggcatgttg gtcactatgc caaaacgcta tgaccaggat ccggcaaacc agggcatcgt
    16801 tgatgcgctg aaagcagaca agaaagatcc gtccgggcct tatgtctgga tcacctacgc
    16861 ggcggtgcaa tctctggcga ctgcccttga gcgtactggc agcgatgagc cgctggcgct
    16921 ggtgaaagat ttaaaagcta acggtgcaaa caccgtgatt gggccgctga actgggatga
    16981 aaaaggcgat cttaagggat ttgattttgg tgtcttccag tggcacgccg acggttcatc
    17041 cacggcagcc aagtgatcat cccaccgccc gtaaaatgcg ggcgggttta gaaaggttac
    17101 cttatgtctg agcagttttt gtatttcttg cagcagatgt ttaacggcgt cacgctgggc
    17161 agtacctacg cgctgatagc catcggctac accatggttt acggcattat cggcatgatc
    17221 aacttcgccc acggcgaggt ttatatgatt ggcagctacg tctcatttat gatcatcgcc
    17281 gcgctgatga tgatgggcat tgataccggc tggctgctgg tggcggcggg attcgtcggc
    17341 gcaatcgtca ttgccagcgc ctacggctgg agtatcgaac gggtagccta tcgcccggtg
    17401 cgtaactcta agcgcctgat tgcgctcatc tcggcaatcg gcatgtccat cttcctgcaa
    17461 aactacgtta gcctgactga aggttcgcgt gacgtggcgc tgcccagtct gtttaacggt
    17521 cagtgggtgg tggggcatag cgaaaacttc tctgcctcta ttaccaccat gcaggcagtg
    17581 atctggattg ttactttcct cgccatgctg gcgctgacga ttttcattcg ttattcccgt
    17641 atggggcgcg cctgccgtgc ctgcgcggaa gatctgaaaa tggcgagcct gcttggcatc
    17701 aacaccgacc gggtgattgc tttgaccttt gttattggcg cggcgatggc ggcagtggct
    17761 ggcgtactgc tcggtcagtt ctacggcgtc attaacccct atatcggctt tatggccggg
    17821 atgaaagcct ttaccgctgc ggtgctcggt gggattggca gcattccagg ggcgatgatt
    17881 ggtgggctga tcctggggat tgcggaggcg ctctcttctg cctatctgag tacggaatat
    17941 aaggatgtgg tttcatttgc cctgctgatt ctggtgctgc tggtgatgcc gaccggtatt
    18001 ctgggtcgcc cggaggtaga gaaagtatga aaccgatgca tattgcaatg gcgctgctct
    18061 ctgccgcgat gttttttgtt ctggcgggcg tctttatggg cgtgcaactg gagctggatg
    18121 gcaccaaact ggtggtcgac acggcttcag acatccgttg gcagtgggtg tttatcggca
    18181 cggcggtggt ctttttcttc cagcttttgc gaccggcttt ccagaaaggg ctaaaaagcg
    18241 tttccggacc gaagtttatt ctgcccgcga ttgatggctc cacggtgaag cagaaactgt
    18301 tcctcgtggc gctgttggtg cttgcggtgg cgtggccgtt tatggtgtca cgtgggacgg
    18361 tggatatcgc cactctgacc atgatctaca ttatcctcgg tctcgggctg aatgtggttg
    18421 ttggtctttc tggtctgctg gtgctggggt acggcggttt ttacgccatc ggcgcttaca
    18481 cctttgcgct gctcaatcac tattacggct tgggcttctg gacttgtctg ccgattgccg
    18541 ggttaatggc agcggcggcg ggcttcctgc tcggctttcc ggtgctgcgt ctgcgcggtg
    18601 attatctggc gatcgttacc ctcggcttcg gcgaaattgt gcgcatattg ctgctcaata
    18661 acaccgaaat taccggcggc ccgaacggaa tcagtcagat cccgaaaccg actttcttcg
    18721 gccttgagtt cagccgtacc gcccgtgaag gcggttggga cacgttcagt aatttctttg
    18781 gcctgaaata cgatccctcc gatcgcgtca tcttcctgta tctggtggcg ttgctgctgg
    18841 tggtgctaag cctgtttgtc attaaccgcc tgctgcggat gccgctgggg cgtgcgtggg
    18901 aagcgttgcg tgaagatgag atcgcctgcc gttcgctggg cttaagcccg cgtcgtatca
    18961 agctgaccgc ttttaccatc agtgccgcgt ttgccggttt tgccggaacg ctgtttgctg
    19021 cgcgccaggg ctttgtcagc ccggaatcct tcacctttgc tgaatcggcg tttgtactgg
    19081 cgatagtggt gctcggcggt atgggatcgc agtttgcggt gattctggcg gcaattttgc
    19141 tggtagtgtc gcgcgagttg atgcgtgatt tcaacgaata cagcatgtta atgctcggtg
    19201 gtttgatggt gctgatgatg atctggcgtc cgcagggctt gctgcccatg acgcgcccgc
    19261 aactgaagct gaaaaatggc gcagcgaaag gagagcaggc atgagtcagc cattattatc
    19321 tgtgaacggc ctgatgatgc gcttcggcgg cctgctggcg gtgaacaacg tcaatcttga
    19381 actgtacccg caggagatcg tctcgttaat cggtcctaac ggtgccggaa aaaccacggt
    19441 ctttaactgc ctgaccggat tctacaaacc cactggaggc accattttac tgcgcgatca
    19501 gcatctggaa ggtttaccgg ggcagcaaat tgcccgcatg ggcgtggtgc gtaccttcca
    19561 gcatgtgcgt ctgttccgtg aaatgacggt gattgaaaac ctgctggtgg cgcagcatca
    19621 gcaactgaaa accgggctgt tctctggcct gttgaaaacg ccatccttcc gtcgcgccca
    19681 gagcgaagcg ctcgatcgcg ccgcgacctg gcttgagcgc attggtttgc tggaacacgc
    19741 caaccgtcag gcgagtaacc tggcctatgg tgaccagcgc cgtcttgaga ttgcccgctg
    19801 catggtgacg cagccggaga ttttaatgct cgacgaacct gcggcaggtc ttaacccgaa
    19861 agagacgaaa gagctggatg agctgattgc cgaactgcgc aatcatcaca acaccactat
    19921 cttgttgatt gaacacgata tgaagctggt gatgggaatt tcggaccgaa tttacgtggt
    19981 caatcagggg acgccactgg caaacggtac gccggagcaa atccgtaata acccggacgt
    20041 gatccgtgcc tatttaggtg aggcataaga tggaaaaagt catgttgtcc tttgacaaag
    20101 tcagcgccca ctacggcaaa atccaggcgc tgcatgaggt gagcctgcat atcaatcagg
    20161 gcgagattgt cacgctgatt ggcgcgaacg gggcggggaa aaccaccttg ctcggcacgt
    20221 tatgcggcga tccgcgcgcc gccagcgggc gaattgtgtt tgatgataaa gacattaccg
    20281 actggcagac ggcgaaaatc atgcgcgaag cggtagcgat tgtcccggaa gggcgtcgcg
    20341 tcttctcgcg gatgacggtg gaagagaacc tggcgatggg cggctttttt gccgaacgcg
    20401 accagttcca ggagcgcata aagtgggtgt atgaactgtt tccacgtctg catgagcgcc
    20461 gtgttcagcg ggcaggcacc atgtccggcg gtgagcaaca aatgctggcg attggtcgcg
    20521 cgctgatgag caacccgcgt ttgctgctac ttgatgagcc atcgctcggt cttgcgccga
    20581 ttatcatcca gcaaattttc gacaccatcg agcagctgcg cgagcagggg atgactatct
    20641 tcctcgtcga gcagaacgcc aaccaggcgc taaagctggc ggatcgcggc tacgtgctgg
    20701 aaaacggcca tgtggtgctc tccgataccg gcgacgcgct gctggcgaac gaggcagtga
    20761 gaagtgcgta tttaggcggg taataacacg ttgattgata aggagtcaaa agactccttt
    20821 gagacaggtg acaaatgtaa aattgcctga tgcgctgcgc ttatcaggcc tactgggtga
    20881 gttgcaatat attgaatttg cacgatcttg taggccggat aaggcgttta cgccgcatcc
    20941 ggcatgaaac gatgagtaat ctgtagagtt tgattcagac cttctatttt tccgcttatc
    21001 cgtgccccat ctcccatttt ccctcaccca cgccgtcacc gccttgtcat ctttctgaca
    21061 ccttactatc ttacaaatgt aacaaaaaag ttatttttct gtaattcgag catgtcatgt
    21121 taccccgcga gcataaaacg cgtgaattcg cgcattcggt acaacaagag agataaacga
    21181 tgaaaccgtt acattataca gcttcagcac tggcgctcgg actggcgtta atggggaatg
    21241 cacaggcagt gacgaccatt ccgttctggc attctatgga aggggaactg ggtaaagagg
    21301 tggattctct ggcccaacgt tttaacgccg aaaatccgga ttacaaaatt gtaccgacct
    21361 ataaaggcaa ctacgaacag aatttaagcg cggggattgc cgcatttcgt accggcaacg
    21421 ctccggctat tttgcaggtt tatgaagttg gcaccgccac catgatggca tcgaaagcca
    21481 ttaaaccggt atatgacgtg tttaaagagg cggggattca attcgatgag tcgcagtttg
    21541 tgccgacggt ttccggttac tactccgaca gcaaaacggg ccacttactc tcccagccat
    21601 tcaacagctc gactcccgtt ctctattaca acaaagacgc cttcaagaaa gcggggttag
    21661 acccggaaca gccgccgaaa acctggcagg atctggcgga ctatgccgcg aaactgaaag
    21721 cctccggcat gaagtgcggc tacgccagcg gctggcaggg ctggatccaa ctggaaaact
    21781 ttagcgcttg gaacggtctg ccgtttgcca gcaaaaacaa cggctttgac ggcacagatg
    21841 cggtgctgga gttcaacaag ccggagcagg tgaaacacat cgccatgctc gaggagatga
    21901 acaagaaggg cgacttcagc tacgtcggtc gtaaggatga atccaccgag aagttctata
    21961 acggtgattg cgcgatgacc accgcctctt ccggttctct tgccaacatt cgcgagtacg
    22021 ccaaatttaa ctacggcgta ggcatgatgc cttacgacgg cgatgcgaaa gatgcgccac
    22081 aaaacgccat tatcggcgga gccagcctgt gggtgatgca gggtaaagat aaagaaacgt
    22141 ataccggtgt ggcgaagttc ctcgatttcc tcgcgaagcc agaaaacgct gccgagtggc
    22201 atcagaaaac cggttatctg ccaatcacca aagcagcgta tgacctgacc cgtgagcagg
    22261 gcttttatga gaaaaaccca ggggcggata ccgcgacgcg tcagatgctg aataagccgc
    22321 cgttgccgtt caccaaaggg ctgcgtctgg gcaacatgcc gcagatccgc gtgattgtgg
    22381 atgaagagct ggagagcgtg tggaccggta agaagacacc acagcaggca ctggataccg
    22441 ccgttgagcg tgggaaccag ttactgcgcc gctttgagaa atcgacgaag tcttaatcag
    22501 tgtaatgtcg gatgcgtttc gcttatctga cctggcatcg cgtgtaggcc ggataagcga
    22561 agcgcatccg gcacagttca ggaattaacc gtaatgtcat catcccgtcc ggtgttccgc
    22621 tcgcgctggc tgccttatct gctggtcgcg ccgcagctca tcatcaccgt tatctttttt
    22681 atctggcctg cgggcgaagc gttgtggtac tcgctgcaaa gcgtcgatcc gtttggtttc
    22741 tccagccagt ttgtcggtct ggataacttc gtcacgctgt tccatgacag ctactatcta
    22801 gactccttct ggacgacgat aaaattcagc acctttgtca ccgtcagcgg tttgctggta
    22861 tcgctgttct ttgcggcgct ggtggagtac atcgtgcgcg gcagccgttt ctatcaaacc
    22921 ttgatgctgc tgccgtatgc cgtggctccc gccgttgccg ccgtattgtg gatcttcctg
    22981 tttaaccccg gtcgcgggct gatcacccat tttctcgctg agttcggcta cgactggaac
    23041 cacgcgcaaa acagcggtca ggcaatgttt ctggtggtgt ttgcctcggt gtggaagcaa
    23101 atcagctaca actttctgtt cttctatgcc gcgctgcact ccattccccg ttcgttgatc
    23161 gaagccgcag ccatcgacgg tgcagggccg attcgccgct tctttaagat tgcgctgccg
    23221 cttatcgccc cggtgagttt cttcctgctg gtagtgaacc tggtgtatgc cttcttcgac
    23281 accttcccgg tgatcgacgc cgccacgtcc ggcgggccgg ttcaggccac cacgacgctg
    23341 atttataaga tctaccgcga aggttttacc ggactggatc tggcttcgtc tgccgcacag
    23401 tcggtggtgt tgatgttcct cgtcatcgtg ctgacggtgg tgcagttccg ctatgttgaa
    23461 agcaaggtgc gttaccaatg attgagaacc gtccgtggct gacgatattc agccatacca
    23521 tgctgatcct cgggatcgcg gtgatcctct tcccgctgta cgtggcgttt gtcgcggcga
    23581 cgctggataa acaggccgtc tatgccgcgc cgatgacgct catccccggc acacatctgc
    23641 tggaaaatat ccacaacatc tgggttaacg gggtaggtac gaatagcgcg ccgttctggc
    23701 ggatgttgct taacagcttt gtgatggcgt tcagcattac gctcggcaaa attaccgtct
    23761 cgatgctctc ggcatttgcc attgtctggt ttcgttttcc gctacgtaac ctcttcttct
    23821 ggatgatttt tatcaccctg atgctgccgg ttgaagtacg tatcttcccg acggtggaag
    23881 tcatcgccaa cctgaagatg ctcgacagct acgccggttt aacgctgccg ctgatggcct
    23941 cggcgaccgc cacgtttctg tttcgccagt tctttatgac gctgccggat gaactggtgg
    24001 aagcggcgcg gatcgacggc gcatcgccaa tgcgcttctt ttgcgacatc gtttttccgc
    24061 tctccaaaac taatctggcg gcgctgtttg tgatcacctt tatttacggc tggaaccagt
    24121 atttgtggcc gttgttgatt attaccgacg tggatctcgg caccaccgtg gcagggatca
    24181 aagggatgat cgccactggc gaaggcacca cggaatggaa ctcagtgatg gcggcgatgt
    24241 tgttaaccct gatcccacca gtagtgattg ttttagtgat gcagcgtgcc ttcgtgcgcg
    24301 gcctggtcga tagtgagaaa taagatggca ggactgaaat tacaggcagt aaccaaaagc
    24361 tgggatggca aaacccaggt cattaaaccg ctgacccttg atgtggctga tggcgaattt
    24421 atcgtgatgg tcgggccgtc tggctgcggg aaatcgacgc tgctgcgtat ggttgccggg
    24481 ctggagcggg tgaccgaagg cgatatctgg atcaacgacc agcgcgtgac tgaaatggag
    24541 ccgaaagatc gcgggattgc gatggtgttc cagaactacg cgctttatcc gcatatgagc
    24601 gtcgaagaaa acatggcgtg ggggcttaaa attcgcggca tgggcaagca gcaaattgcc
    24661 gagcgcgtta aagaagcggc gcgcattctg gtgctggacg gtctgctcaa acgtcgcccg
    24721 cgtgagctat ccggcggtca gcgtcagcgt gtagcgatgg gccgcgcgat tgtgcgcgat
    24781 ccggcggtgt tcctgtttga tgagccgctc tctaacctcg atgccaagct gcgcgtgcag
    24841 atgcgtcttg aactgcaaca gttgcaccgt cgcctgaaaa cgacttcact ctacgttact
    24901 cacgatcagg ttgaagcgat gacgctcgcc cagcgagtaa tggtgatgaa cggcggcgtt
    24961 gccgaacaga ttggcacacc agttgaagtc tacgaaaagc ccgccagcct gtttgtagcg
    25021 agttttatcg gcagtccggc gatgaacctg ctgacaggcc gcgtgaataa cgaaggcacg
    25081 catttcgaac tggacggcgg tattgagctg ccgctaaacg gtggctaccg tcagtatgcc
    25141 gggcgtaaaa tgactctcgg cattcgcccg gaacatattg tgctaagctc gcaggcagaa
    25201 ggcggcgtac cgctggtgat ggacacgctg gagatcctcg gcgcagataa cctggcgcac
    25261 ggacgctggg gcgagcagaa gctggtggtg cgactggcgc atcaggagcg cccgacggca
    25321 ggcagcacgc tgtggctgca tctggcggaa aatcagctgc atctttttga tggtgaaaca
    25381 ggacaacgag tatgagtaac tggccttatc cccgcatcgt cgctcatcgt ggcggcggta
    25441 agctggcccc ggaaaacacc ctggcggcaa tcgacgtcgg ggcaaaatac ggtcataaga
    25501 tgatcgaatt tgacgcgaag ttatcgaaag atggcgagat cttcctgctc catgacgaca
    25561 atctcgaacg caccagcaac ggctggggcg tcgcgggtga actgaactgg caggatttac
    25621 tgcgcgtgga tgcgggcagt tggtacagca aagcgtttaa aggtgagccg ctgccgttgc
    25681 tttcgcaggt ggcggaacgc tgtcgcgaac acgggatgat ggcgaatatc gaaatcaaac
    25741 ccaccactgg cactggacca ttaacgggca aaatggtggc gctggcggca cgccaactgt
    25801 gggccggtat gacgccgccg ctgctgtcat cgtttgagat tgatgcttta gaagctgcac
    25861 agctggcggc accggaactg ccgcgtggtt tattgcttga tgagtggcgc gacgactggc
    25921 gcgaactgac cgcgcggctg ggctgcgtct ctattcatct caatcataag ttactcgata
    25981 aagcgcgagt gatgcagttg aaagacgccg gattacggat tctggtttat accgtcaata
    26041 aaccccagcg cgcggcagag ttgctgcgct ggggcgtgga ttgcatctgt accgatgcga
    26101 ttgacgtgat tggtccgaac tttacggccc aatagttttc aacggaatgt caggctgcgg
    26161 cgtgctgggc tgattcagca tgtcgccgtt tctcctctcc ggcagcatat gctgctgatt
    26221 caacgaacta tccggattac ggttgctgtt taacatcccg ccgttggtgt tgggcagcat
    26281 ttgctgccgg gcgggatttc gctcccccgg ctgtgactgc aacacccgct gagaattatt
    26341 gtttatctgg ttttctaaat gctgctgttg caactgagtt tgcgttttca gttgctgatt
    26401 cagcatccct ttttgctgga tttgctgagt ttgcatctgg gtttgcatcc gctgctggct
    26461 gggtatctga taccccggct ggttagggtt gttcagagta ttaatgggct gtgcaaagcc
    26521 gacaaacggc aggagtgccg taagaatcag aagtcgtttc atcgcgtatc ctcctctgaa
    26581 gatatccttt aagtttactc gcttcccgac aaaacgatga ttaattcaga gttatatacc
    26641 aggcttagct ggggttgccc cttaatctct ggagaataac gatgataaaa ccgacgtttt
    26701 tacgccgggt agccattgct gctctgctct caggaagttg ttttagcgcc gtcgccgcgc
    26761 ctcctgtttc ttacggcgtg gaggaagata tcttccatcc ggtacgcgcg aaacagggga
    26821 tggtggcgtc tgtcgatgcc actgccaccc aagtgggggt agatattcta aaggagggcg
    26881 ggaatgccgt tgatgccgcc gtggcggtgg gctacgcgct ggcggtaacg catccgcagg
    26941 cagggaatct gggcggtggt ggttttatgc tgatccgctc gaaaaatggc aataccaccg
    27001 ctatcgattt ccgcgagatg gcacccgcta aagcgacccg cgatatgttc cttgatgacc
    27061 agggcaaccc ggacagcaaa aaatcactca cttcgcatct ggcttccggc acgcccggta
    27121 cggtcgctgg tttctcgctg gcgttggata agtacggcac tatgccgttg aacaaagtgg
    27181 tgcagcccgc gttcaaactg gcacgcgatg gttttatcgt taacgatgct ttggcagacg
    27241 atctcaaaac ctacggtagc gaagtgttgc cgaatcacga aaacagcaaa gctatcttct
    27301 ggaaagaggg cgaaccgctg aaaaagggcg acaagctggt gcaggcgaac ctggcaaaga
    27361 gcctggagat gattgccgaa aacggcccgg acgaattcta taaaggcacg atagcggaac
    27421 agattgccca ggagatgcag aaaaacggtg gcttgatcac taaagaagat ttagcggcgt
    27481 ataaagcggt cgaacgcaca ccgataagtg gcgattatcg cgggtatcag gtttactcca
    27541 tgccaccgcc atcctccggc gggatccata tcgtacaaat cctcaatatt ctggaaaact
    27601 tcgatatgaa gaaatacgga tttggcagcg ccgatgcgat gcaaatcatg gcagaagcgg
    27661 agaaatacgc ctacgccgac cgctcggaat atcttggcga cccggatttt gtcaaagtac
    27721 cgtggcaggc gctgaccaat aaagcctatg ccaaatctat tgccgatcaa attgatatca
    27781 ataaagcgaa gccatccagc gaaattcgcc ccggcaagct tgcgccttat gagagtaatc
    27841 aaactaccca ttactcagtg gtggataaag atggtaacgc ggtggcggtg acctatacgc
    27901 tgaacaccac cttcggtacg ggcattgtcg cgggcgagag cggtattctg cttaataatc
    27961 agatggatga tttctccgct aaaccgggcg taccgaacgt ttacgggctg gtgggcggtg
    28021 atgccaacgc cgtcgggccg aataaacgtc cgctgtcgtc aatgtcacca acgattgtgg
    28081 tgaaagacgg taaaacctgg ctggtcaccg gtagccctgg cgggagccgg atcatcacta
    28141 cagtgctgca aatggtggtg aatagcatcg attatggcat gaacgtcgcc gaagcgacca
    28201 atgcgccgcg tttccaccat cagtggttgc cggacgagct gcgtgtcgaa aaagggttta
    28261 gcccggatac gctcaagctg ctggaagcaa aaggtcagaa agtggcgctg aaagaggcga
    28321 tgggcagtac acaaagcatt atggttgggc cggacggtga gttgtacggc gcatccgacc
    28381 cgcgctcggt ggatgattta acggcggggt actaaggtta gcggccctct tcgtgggaag
    28441 agggctattt tgtcagggca agccgaaggt agcctttttt atttcgtaat cctgtagata
    28501 ttcttccagc ggctttgccg ttcccagaga atgaatttca ccactgtctt tatcaataat
    28561 aaaaggtgcg ttaccagcta agcgcgcggc ctcatctcca gtttcgagaa attctcgtgc
    28621 ttcgaaacag aaataccagc cctggctaaa gcgtccatgt agagtaatga cgaccgggag
    28681 atctgcatca tcaaggtaat ggttcgcttt cgcgaatgcg tcgtgataag taatcataat
    28741 tataataaat attattgttg agtgttatat tattattcct gtgtgataca ttgagcaaag
    28801 acgtgttcat cttcgtcaaa gatattatta aatgctggtt ttgaaaaaag ttcatcggat
    28861 aagatatagt cacgaaataa gtatctgcta atattttata atttcttttt cagaacgtcg
    28921 aacgggattt tcttatttaa gatatcagaa tcttatgatt cgggtaaaat tctaaataaa
    28981 tcaatatgtc attaaaatca tcatagccat tagctatttc ggctaaaata gagactacat
    29041 gtcttcggtc catctcactt aaggagtgta gttccgttgt aagtttttcc atagcttgca
    29101 ctgctaaatt tcgaacaagg aattttctgc tggtaatctc taaaaagatg gcatggttta
    29161 caatgatttt tgtttccttt tgattattat gaacaactgt ccatgatttc gtttaagaat
    29221 gaagagaaat cacta
//
LOCUS       DADMHC010000032        29218 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.032, whole genome shotgun sequence.
ACCESSION   DADMHC010000032 DADMHC010000000
VERSION     DADMHC010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29218)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29218)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29218
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.032"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(444..1115)
                     /gene="queE"
                     /locus_tag="JNZ57_001156"
     CDS             complement(444..1115)
                     /gene="queE"
                     /locus_tag="JNZ57_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001199960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HAY8827448.1"
                     /translation="MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTW
                     EKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLL
                     PLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYDVLSQALERANEIKH
                     PVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHK
                     YLNIA"
     gene            1254..1394
                     /locus_tag="JNZ57_001157"
     CDS             1254..1394
                     /locus_tag="JNZ57_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827449.1"
                     /translation="MSEENKENGFNHVKTFTKIIFIFSVLVFNDNESKITDAAVNLFI
                     QI"
     gene            1408..2280
                     /locus_tag="JNZ57_001158"
                     /pseudo
     CDS             1408..2280
                     /locus_tag="JNZ57_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417258.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YgcG family protein"
     gene            complement(2340..3638)
                     /gene="eno"
                     /locus_tag="JNZ57_001159"
     CDS             complement(2340..3638)
                     /gene="eno"
                     /locus_tag="JNZ57_001159"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HAY8827450.1"
                     /translation="MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTG
                     SREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTEN
                     KSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHA
                     DNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGS
                     NAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHF
                     LEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKG
                     IANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQI
                     KTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA"
     gene            complement(3726..5363)
                     /gene="pyrG"
                     /locus_tag="JNZ57_001160"
     CDS             complement(3726..5363)
                     /gene="pyrG"
                     /locus_tag="JNZ57_001160"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase (glutamine hydrolyzing)"
                     /protein_id="HAY8827451.1"
                     /translation="MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPY
                     INVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRK
                     ERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQM
                     AVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPA
                     NERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEW
                     EQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVE
                     TRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARH
                     VANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVD
                     DSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPW
                     FVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK"
     gene            complement(5591..6382)
                     /gene="mazG"
                     /locus_tag="JNZ57_001161"
     CDS             complement(5591..6382)
                     /gene="mazG"
                     /locus_tag="JNZ57_001161"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HAY8827452.1"
                     /translation="MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVL
                     DAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFAD
                     SSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWT
                     TLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQK
                     ANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL"
     gene            complement(6453..6788)
                     /gene="mazF"
                     /locus_tag="JNZ57_001162"
     CDS             complement(6453..6788)
                     /gene="mazF"
                     /locus_tag="JNZ57_001162"
                     /EC_number="3.1.27.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endoribonuclease MazF"
                     /protein_id="HAY8827453.1"
                     /translation="MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTG
                     MCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKRIAWRARGATKKGTVAPEELQLI
                     KAKINVLIG"
     gene            complement(6788..7036)
                     /gene="mazE"
                     /locus_tag="JNZ57_001163"
     CDS             complement(6788..7036)
                     /gene="mazE"
                     /locus_tag="JNZ57_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin MazE"
                     /protein_id="HAY8827454.1"
                     /translation="MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLII
                     EPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW"
     gene            complement(7114..9348)
                     /gene="relA"
                     /locus_tag="JNZ57_001164"
     CDS             complement(7114..9348)
                     /gene="relA"
                     /locus_tag="JNZ57_001164"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP diphosphokinase"
                     /protein_id="HAY8827455.1"
                     /translation="MVAVRSAHINKAGGFDPEKWIASLGITSQKSCECLAETWAYCLQ
                     QTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKS
                     VVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHL
                     REVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLL
                     HERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDV
                     RAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTV
                     EIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGE
                     MLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVP
                     FTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAG
                     RQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNK
                     PSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGF
                     ITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRD
                     ITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARR
                     LHGS"
     gene            complement(9396..10697)
                     /gene="rlmD"
                     /locus_tag="JNZ57_001165"
     CDS             complement(9396..10697)
                     /gene="rlmD"
                     /locus_tag="JNZ57_001165"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HAY8827456.1"
                     /translation="MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGL
                     LPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQR
                     SKSAALARLMKHEVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGLRKAGSSDIVDVK
                     QCPILVPQLEALLPKVRACLGSLQAMRHLGHVELVQATSSTLMILRHTAPLSSADREK
                     LERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVA
                     SALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQ
                     NVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPA
                     TLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK"
     gene            10754..13510
                     /gene="barA"
                     /locus_tag="JNZ57_001166"
     CDS             10754..13510
                     /gene="barA"
                     /locus_tag="JNZ57_001166"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase BarA"
                     /protein_id="HAY8827457.1"
                     /translation="MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDA
                     GASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFH
                     LDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYI
                     ALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRR
                     GQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQN
                     VELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTI
                     ERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTL
                     NIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIR
                     DTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNR
                     GSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYS
                     PTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKL
                     KQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKL
                     IGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQ
                     QTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPE
                     VNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGL
                     VDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREAS
                     KILG"
     gene            complement(13742..15082)
                     /gene="gudD"
                     /locus_tag="JNZ57_001167"
     CDS             complement(13742..15082)
                     /gene="gudD"
                     /locus_tag="JNZ57_001167"
                     /EC_number="4.2.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucarate dehydratase"
                     /protein_id="HAY8827458.1"
                     /translation="MSSQFTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIMIIK
                     DNSGHTGVGEIPGGEKIRKTLEDAIPLVVGKTLGEYKNVLTLVRNTFADRDAGGRGLQ
                     TFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGDRKAT
                     PLPYQSQPDDSCDWYRLRHEEAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAE
                     SIVALAQRFPQARITLDPNGAWSLNEAIKIGKYLKGSLAYAEDPCGAEQGFSGREVMA
                     EFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGL
                     TWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGLVQV
                     PEKPGLGVEIDMDQVMKAHELYQKHGLCARDDAMGMQYLIPGWTFDNKRPCMVR"
     gene            complement(15103..16443)
                     /locus_tag="JNZ57_001168"
                     /pseudo
     CDS             complement(15103..16443)
                     /locus_tag="JNZ57_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708582.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glucarate dehydratase"
     gene            complement(16445..17815)
                     /locus_tag="JNZ57_001169"
     CDS             complement(16445..17815)
                     /locus_tag="JNZ57_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8827459.1"
                     /translation="MFRSATTSSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRAT
                     LSIAGSEMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWS
                     MFTLLQGFVDIFSGFGIIVALFTLRFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSI
                     FNSAQYFATVIFAPIMGWLTHEVGWSHVFFFMGGLGIVISFIWLKVIHEPNQHPGVNQ
                     KELEYIAAGGALINMDQQNTKVKVPFSVKWGQIKQLLGSRMMIGVYIGQYCINALTYF
                     FITWFPVYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTGSLNIARKT
                     PIVMGMLLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGALGWAVMADTAPKEISGLSG
                     GLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIYVGVHALIAVLSYLVLVGDIKRIEL
                     KPVAGQ"
     gene            complement(18232..18681)
                     /locus_tag="JNZ57_001170"
     CDS             complement(18232..18681)
                     /locus_tag="JNZ57_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin"
                     /protein_id="HAY8827460.1"
                     /translation="MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDW
                     LPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCN
                     GGKQFDALLQEQSAQRVGEMLLIDASENPEPETESNPWVEQWGTLLS"
     gene            complement(18699..19481)
                     /gene="truC"
                     /locus_tag="JNZ57_001171"
     CDS             complement(18699..19481)
                     /gene="truC"
                     /locus_tag="JNZ57_001171"
                     /EC_number="5.4.99.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(65) synthase TruC"
                     /protein_id="HAY8827461.1"
                     /translation="MLEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIG
                     QHVFTAHRLDRPTSGVLLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDY
                     PLVEELDKIADKFAREDKGPQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGR
                     KHQLRRHLAHLRHPIIGDSKHGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLT
                     IHAGLDDTWMQALSQFGWRGLLPENERVEFSAPSGQDGEISS"
     gene            complement(19481..19810)
                     /locus_tag="JNZ57_001172"
     CDS             complement(19481..19810)
                     /locus_tag="JNZ57_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqcC family protein"
                     /protein_id="HAY8827462.1"
                     /translation="MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDT
                     MEPLEWLQWVLIPRMHDLLNNNQPLPGAFAVAPYYEMALATDHPQHALILAELEKLDA
                     LFADDAS"
     gene            complement(20432..20977)
                     /gene="syd"
                     /locus_tag="JNZ57_001173"
     CDS             complement(20432..20977)
                     /gene="syd"
                     /locus_tag="JNZ57_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SecY-interacting protein"
                     /protein_id="HAY8827463.1"
                     /translation="MDDLTAQALKDFTARYCDAWHEEHKSWPLSEELYGVPSPCIIST
                     TEDAVYWQPQPFTGEQNVNAVERAFDIVIQPTIHTFYTTQFAGDMHAQFGDIKLTLLQ
                     TWSEDDFRRVQENLIGHLVTQKRLKLPPTLFIATLEEELEVISVCNLSGEVCKETLGT
                     RKRTHLASNLAEFLNQLKPLL"
     gene            21045..21893
                     /gene="queF"
                     /locus_tag="JNZ57_001174"
     CDS             21045..21893
                     /gene="queF"
                     /locus_tag="JNZ57_001174"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HAY8827464.1"
                     /translation="MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGL
                     KADNLPFHGTDIWTLYELSWLNAKGLPQVAVGHVELDYTSVNLIESKSFKLYLNSFNQ
                     TRFNNWDEVRQTLERDLSTCAQGKISVALYRLDELEGQPIGHFNGTCIDDQDITIDNY
                     EFTTDYLENATCGEKVVEETLVSHLLKSNCLITHQPDWGSIQIQYRGRQIDREKLLRY
                     LVSFRHHNEFHEQCVERIFNDLLRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPST
                     TRLVRQ"
     gene            22005..23369
                     /gene="ppnN"
                     /locus_tag="JNZ57_001175"
     CDS             22005..23369
                     /gene="ppnN"
                     /locus_tag="JNZ57_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide 5'-monophosphate nucleosidase"
                     /protein_id="HAY8827465.1"
                     /translation="MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNS
                     GSLTDNSKELLSRFENFDINVLRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLR
                     DILFVYGQIHNTVRFPNLNLDNSVHITNLVFSILRNARALHVGEAPNMVVCWGGHSIN
                     ENEYLYARRVGNQLGLRELNICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPS
                     IIAAEPPNPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPA
                     NKDQVLPLILTGPKESADYFRVLDEFVVHTLGENARRHYRIIIDDAAEVARQMKKSMP
                     LVKENRRDTGDAYSFNWSMRIAPDLQMPFEPSHENMANLKLYPDQPVEVLAADLRRVF
                     SGIVAGNVKEVGIRAIEEFGPYKINGDKEIMRRMDDLLQGFVAQHRMKLPGSAYIPCY
                     EICT"
     gene            23926..25215
                     /locus_tag="JNZ57_001176"
     CDS             23926..25215
                     /locus_tag="JNZ57_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
                     /protein_id="HAY8827466.1"
                     /translation="METTQTSTIASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPIN
                     AGVGGMIPLIIMAILAFPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLIT
                     LLYFFAIYPILLVYSVAITNTVESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQM
                     IVKAMSILVFPFVGVLMLLALYLIPQWNGAALETLSLDTASATGNGLWMTLWLAIPVM
                     VFSFNHSPIISSFAVAKREEYGDMAEQKCSKILAFAHIMMVLTVMFFVFSCVLSLTPA
                     DLAAAKEQNISILSYLANHFNVPVIAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIK
                     SLRGKGKSIEINKLNRITALFMLVTTWIVATLNPSILGMIETLGGPIIAMILFLMPMY
                     AIQKVPAMRKYSGHISNVFVVVMGLIAISAIFYSLFS"
     gene            25273..26640
                     /gene="sdaB"
                     /locus_tag="JNZ57_001177"
     CDS             25273..26640
                     /gene="sdaB"
                     /locus_tag="JNZ57_001177"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase II"
                     /protein_id="HAY8827467.1"
                     /translation="MISVFDIFKIGIGPSSSHTVGPMKAGKQFTDDLIARNLLKDVTR
                     VVVDVYGSLSLTGKGHHTDIAIIMGLAGNLPDTVDIDSIPGFIQDVNTHGRLMLANGQ
                     HEVEFPVDQCMNFHADNLSLHENGMRITALAGDKVVYSQTYYSIGGGFIVDEEHFGQQ
                     DSAPVEVPYPYSSAADLQKHCQETGLSLSGLMMKNELALHSKEELEQHLANVWEVMRG
                     GIERGISTEGVLPGKLRVPRRAAALRRMLVSQDKTTTDPMAVVDWINMFALAVNEENA
                     AGGRVVTAPTNGACGIIPAVLAYYDKFIREVNANSLARYLLVASAIGSLYKMNASISG
                     AEVGCQGEVGVACSMAAAGLAELLGASPAQVCIAAEIAMEHNLGLTCDPVAGQVQVPC
                     IERNAIAAVKAVNAARMALRRTSEPRVCLDKVIETMYETGKDMNAKYRETSRGGLAMK
                     IVACD"
     gene            26662..27507
                     /gene="xni"
                     /locus_tag="JNZ57_001178"
     CDS             26662..27507
                     /gene="xni"
                     /locus_tag="JNZ57_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311685.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flap endonuclease Xni"
                     /protein_id="HAY8827468.1"
                     /translation="MRGLFPISHPAVACSGIECYPYRLIFKGVIVAVHLLIVDALNLI
                     RRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPP
                     MPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGY
                     CQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPK
                     SATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQ
                     LRLVR"
     gene            complement(27612..28749)
                     /gene="fucO"
                     /locus_tag="JNZ57_001179"
                     /pseudo
     CDS             complement(27612..28749)
                     /gene="fucO"
                     /locus_tag="JNZ57_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417279.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lactaldehyde reductase"
     gene            complement(28777..>29218)
                     /locus_tag="JNZ57_001180"
     CDS             complement(28777..>29218)
                     /locus_tag="JNZ57_001180"
                     /EC_number="4.1.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="L-fuculose-phosphate aldolase"
                     /protein_id="HAY8827469.1"
                     /translation="PSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILNRPIPAIHY
                     MIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLA
                     HEVEVLAQLYLTTLAITDPVPVLSDEEIAVVLEKFKTYGLRIEE"
BASE COUNT         7183 a         7705 c         6952 g         7378 t
ORIGIN      
        1 gtgttacgtg gatatgttgc ttattacaag tactgctaat ataaaaactt gagaaagaga
       61 taacgggtta tatggtggtt tatccccgct ggcgcgggga actctgtaaa cataacctat
      121 tattaattaa tgatttttta agccagtcac aatctaccaa ctttacagta tcacacaaac
      181 aacacatcca ttatgttaaa gagtacttaa ttcattgatt aaaaaggtaa atatttaaaa
      241 taactctata caaattaaaa tctaccaaac tttaccgcaa taattttcac tccagcgaaa
      301 aattaatgcc acagaatttg tagagaatgc taatgattag ccctggatgg gtaaaatgga
      361 ggagttttca gaggcgacaa acaatataaa tgagtagaag tctttacagg ttccacccat
      421 ttataacgct tataaatgtt taatcaggca atatttagat atttatgtgt ttgcatcgac
      481 aaacgccaat tacgcgcaat gcaggtttca atgcacaaac gtgtggcatc atccttttgg
      541 ctaatcggct gcagtgcaat gactcgcggt ttatcatcgg tcagcgttgc caatagttca
      601 tccagtgctt caatatcgcg tacgcgcccc actggatgct tgatttcgtt ggctcgctcc
      661 agtgcctgtg acaacacgtc atagccgccg cgcatgttca gctttggcga tacggtaacc
      721 caggtattcg gtgtgcagcg tacttcatga gttccactgg tttcgatctg gcagctaaaa
      781 ccgttctttt cgagcaggtc agtcagtggc agcaaatcat gaatgcaagg ctcaccaccc
      841 gtaatcacca catgccgcgc ggtatatccc tgccgaccaa tgacagccag caaatcttca
      901 ctgctcgccg ccccccactt atcactctct ttggtcttcg ccagaatgct gaaaagggag
      961 acttcccgat cctcaagctt ttcccaggtg tgtttggtgt cgcaccaggc acagccaacc
     1021 gggcatccct gtaaacgaat aaaaatggcg gggacgccgg taaagtaacc ctcaccttgc
     1081 agggtctgga acatctcgtt aatcgggtac tgcatagcat tctctgtgaa gtggataatt
     1141 gttaattatt gcagatcctg ccgcaacaat catgtcttat taacattctg ttacatgcag
     1201 atttaaagaa aaatgcgaaa catatcgtta ataattaaag ggagtaacgt attatgtcag
     1261 aagaaaataa agaaaatgga tttaatcatg tcaaaacatt caccaaaatt atatttattt
     1321 tttctgtatt agtttttaat gataacgagt ctaaaattac cgatgccgcc gtcaatttat
     1381 ttatccagat ttaatgagaa atttataatg cgctatttca tactaatgtt cactttcgta
     1441 tgttcctttg ttgcagccca accaactatt gtcccacaat tacagtaaca agttacggat
     1501 cttacgagta gcttaaactc acaagaaaag aaagaactga cgcacaagtt agaatctatt
     1561 ttcaataata cccaagtgca aattgctgta ttaattgttc ccacaaccaa agacgagaca
     1621 attgaacaat atgctacaag agtttttgac aattggcgtt taggagatgc caaacgtaat
     1681 gatgggatac tgatcattgt tgcctggtca gatcgtactg tccgcatcca ggtaggttat
     1741 gggctggaag aaaaggtaac cgatgctctg gctggagata tcatccgtag caacatgata
     1801 cccgcattta aacaacaaaa atttgctcag ggattagagc tagctataaa cgctttgaat
     1861 aaccaactca cttcacaaca ccaatatccg actaatcctt cagaaagtga atcagcgtct
     1921 tccagtgatc attattactt tgctattttt tgggtatttg cagtgatgtt cttccctttc
     1981 tggttttttc atcaaggcag taatttttgt cgcgcatgta aaagtggagt ctgtatttca
     2041 gcaatctatc ttttagattt attcctgttc tccgataaaa ttttttccat tgctgtattt
     2101 tccttctttt ttactttcac catatttatg gtctttacct gtttatgtgt acttcagaaa
     2161 agagcatcag gtaaaagtta tcattcagac aacagcggtt ccggtggagg ctcaagtggc
     2221 ggcggattta gcggcggtgg cggttcttct ggaggtggcg gcgcatccgg ccgctggtaa
     2281 ctcaaccata aaaaatgcca tcccggaggc tggcattttt aaatcagata aagtcagtct
     2341 tatgcctggc ctttgatctc tttacgaccg ttgtacggtg ctttttcgcc cagagcttct
     2401 tcgatacgaa tcagctggtt gtatttagca acacggtcag aacggctcat agaaccagtt
     2461 ttgatctggc ctgcagcagt accaacagcc aggtcagcga tggtagcgtc ttcagtttcg
     2521 ccagaacggt gagagataac tgcagtgtag ccagcatctt tcgccatctt gattgcagcc
     2581 agagtttcgg tcagagaacc gatctggttg aatttgatca ggatggagtt agcgatacct
     2641 ttttcgatac cttctttcag gatcttggtg ttggttacga acaggtcgtc accaaccagc
     2701 tggattttgt cgcccagaac tttggtctgg tatgcgaaac cgtcccagtc agattcgtcc
     2761 agaccgtctt cgatagaaac gatcgggtac tgtttggtca gttcttccag gaagtgagtg
     2821 aattcttcag aggtgaacgc tttgttgcct tcgccagcca gaacgtattt accatctttg
     2881 tagaattcag aagctgcgca gtccatcgcc agagtgatgt ctttgcccag ttcataacca
     2941 gcagctttaa cagcttcagc gataacagcc agagcttcag cgttggaacc caggttcggc
     3001 gcatagccac cttcgtcacc aacagcagtg ttcatgcctt tcgctttcag aacttttgcc
     3061 aggtgatgga aaacttcaga acccatgcgg atggcttctt tcacagtttt cgcgccaacc
     3121 ggctgaatca tgaattcctg gatatcaacg ttgttgtcag cgtgctcacc accgttgatt
     3181 atgttcatca tcggaaccgg catagagtat ttgcccggag taccgttcag ttcagcgatg
     3241 tgctcgtaca gcggcatacc tttagcagct gcagcagctt tggcgttagc cagagataca
     3301 gccaggattg cgttcgcgcc gaatttggat ttgttttcgg tgccgtccag gtcgatcatg
     3361 atcttgtcaa tgccagcctg atctttagca tctttgccaa tcagcgcctg agcgatcggg
     3421 ccgtttaccg cagcaacagc tttggttacg cctttaccca ggaaacggga tttgtcgcca
     3481 tcgcgcagtt ccagagcttc acgggaacca gtagaagcac ctgacggagc agctgccata
     3541 ccgacgaaac caccctccag atgtacttcg gcttcaacag tcgggttacc acgggagtcg
     3601 atgatttcac gaccgatgat ttttacgatt ttggacatta ggttttcctc aagtcactag
     3661 ttaaactgaa actccagaca aacaacgcgt acccagggta cgcgttgccg ttctaacttt
     3721 tttacttact tcgcctgacg tttctggaac tcgctggcgg ctttcacaaa gcctgcaaac
     3781 agcgggtgac catcacgtgg agtagaagta aactccggat ggaactggca agccacgaac
     3841 cacgggtgat tcggaacttc gatgatctcg accaactgat catccccgga acggcccgca
     3901 acgcgcagac ctgcatcttc aatctgtttc aacagcatgt tgttgacttc gtaacggtga
     3961 cgatgacgct caacaattgt cggcgcattg tacagctggc gaaccaggct atcgtcaacc
     4021 aactggcact gctgtgcgcc gagacgcatg gtaccgccga gatcgctctt ctcgctacga
     4081 acttcaacgt tgccgttttc atcgcgccac tcggtaatca gcgccacaac cgggtactta
     4141 cagtctggca caaattccgt agagttggcg ttctccatgt tggcaacatg gcgagcgtaa
     4201 tcaattaacg ccacctgcat acccaggcaa atgcccagat aaggaatatt gttctcacgc
     4261 gcaaaacgcg cggtcgtaat catgccttct acgccacgat agccgaaacc gccaggtacg
     4321 aggattgcgt ccagaccttt aaggatttca acgccgcgcg tttcaacatc ttgtgaatcg
     4381 atcagtttga tgttgacgct gacacgattc ttcagcccac cgtgtttcag tgcttcgatc
     4441 actgatttat aagcatccgg cagttcaatg tacttgccga ccataccgat ggtgacttca
     4501 cttaccgggt tcgcttcttc gaagataacc tgttcccatt cggacagatt cgcttccggg
     4561 cagtttaagc tgaatcgttt acaaatataa tcgtccagcc cctgagattt caacaggccc
     4621 ggaattttat agatggaatc gacgtctttc agagaaataa ccgctttttc cggaacatta
     4681 cagaacaatg caatcttcgc acgttcgttc gccggaacag cgcgatctga acgacaaatc
     4741 aggatgtcag gctggatacc gatggagagc agctctttta cagagtgctg agtcggtttg
     4801 gttttgactt caccagacgc tgccatgtac ggcaccagcg tcaggtgcat aaacagagtg
     4861 tgctcacggc caatttcaac agccatctgg cgaatcgctt cgaggaacgg caaggattcg
     4921 atatcaccta ctgtaccgcc gatttctacc agtactacgt catgaccttc gccaccttcc
     4981 agcacgcgct ctttgattgc gttagtgatg tgcggaataa cctgcacggt tgcgccgagg
     5041 tagtcaccgc ggcgttcttt acgcagaacg tcagagtaga tacgacccgt ggtgaagttg
     5101 ttgcggcggc tcattttggt acgaatgaaa cgctcgtagt gccccaggtc caggtcggtt
     5161 tcagcgccgt cttcagtaac gaacacttcc ccgtgttgga ttgggctcat agtacctgga
     5221 tcgacgttga tgtacggatc cagtttcatg atggtcacat tgaggccacg ggcttcaaga
     5281 atggctgcga gggaggctgc ggcaatgcct ttacccagag aggatacgac cccgccggtc
     5341 acaaaaatat agttcgttgt catgctgaac ctgagaagtt aggttgaaaa gacgatggaa
     5401 taacctggac gggaaagcag tatacccgaa catgacctgt gccacaaact ttcattatcc
     5461 ctcctcttcg ccagcgcact attgaaatca ggagtgagaa aatagcccct ttggggtaaa
     5521 tgtttttgac gcaaatcaag cgcttgtcat taaaaaaatg acacaaatgg cgcttgaccg
     5581 cgtaattccc ttagagatca atttcctgcc gttttacctg ttgccagact tcttccattg
     5641 tttcgaggtc aacacctgtc atttccagtc cacgcgcggc aacaatacgc tccacttcgc
     5701 gaaaacgacg ctcgaatttt tcgttcgctt tttgcaatgc gatttctgct ttcgtcccta
     5761 aatggcgagc cagattaacc gtggcaaaca gcaggtcccc catttcctcc tccagtttag
     5821 cctggtcgac aacagcctgc cgcgcctcgt acatcacctc gtcgatctct tcgtagactt
     5881 tatcaaccac cgggccaagc gtcgtccagt cgaagccaac gttggcgcaa cgtttctgga
     5941 ttttttgcgc ccgcattaaa gccggtaaac tacgaggaat atcgtccagc gccgaatgct
     6001 gcgctttctg cgcgcgctct tcggttttga tttgctccca acgggcaagc acttcactac
     6061 tgttttcggc agaactatca gcaaaaacat gcggatggcg acgctctaat ttatcgctaa
     6121 tagcagcgca aatatcatta aagtcaaagc gcccttcttc ctgagccatt tgcgcgtaaa
     6181 acaccacctg gaatagcaga tcgcccagtt caccgcgaag atcgtcaaaa tcttcacggg
     6241 cgatggcgtc cagcacttcg taggtttctt caagggtgta aggcgcaatg gtggcaaatg
     6301 tctgctcttt atcccacggg cagccgtttt ccggatcgcg caggcgctgc ataatagtga
     6361 gcaaacgatc gatttgattc attgaattgt cctgaaaatt gcgggtctgt caggtggaaa
     6421 cctgtgacca gaatagaagt gagttagtaa cactacccaa tcagtacgtt aattttggct
     6481 ttaatgagtt gtaattcctc tggggcaact gttcctttct tcgttgctcc tcttgcccgc
     6541 caggcgattc tttttacctg atcagctaac gctacgccat cacgttcctg accggataaa
     6601 acaacttcga acggatatcc ttttgattgc gttgtacaag gaacacacag acacatacct
     6661 gttttgttgt tgtacatgaa aggactcagg acaacagctg gacgatgtcc agcttgctcg
     6721 ctaccttttg tcgggtcaaa atcaacccaa atcagatcgc ccatatcggg tacgtatcgg
     6781 cttaccatta ccagacttcc ttatctttcg gctctcccca gtcgatattc tcgtggaggt
     6841 tttccggcgt gatgtcgttg accagttcag caagcgtaaa tacgggctct ttacgcactg
     6901 gctcaataat taatttgcca tccaccaggt caatcttcac ttcatcatca atattcagat
     6961 tgagcgcctg cattaacgta gccgggatcc gcaccgccgg tgaatttccc caacgcttta
     7021 cgctactgtg gatcataacc cttttctcaa accgctatca tatgtagata cagtatatat
     7081 caatctatat tgtagatacg agcaaatttc tgcctaactc ccgtgcaacc gacgcgcgtc
     7141 gataacatcc ggcacctggt tgagtttacc cagcacgcgg cccagcacct gcaggttgta
     7201 aatctcaatg gtcatgtcga tggtcgccag ttgctgtttg gtgtcgctac ggctggcaac
     7261 gccaagtacg ttcaccttct cgttggcgag aatggtcgtg atatcacgta acaacccact
     7321 acgatcatta gccaccacgc ggaccaccag cgaatatccg gcggagtagc tctcacccca
     7381 taccgcgtca acaatgcgtt ctggcgcatg agagcgcagt tccgccagtt gttcgcaatc
     7441 ggcgcggtgt actgaaatac cgcgcccctg ggtaatgaag ccgacaatct catctccagg
     7501 aatcggctgg cagcagcgcg cgatgtggtg catcaggttg ccaacacctt cgactaccac
     7561 gcgaccgtta tctttactgc ggttttgcgg cgtgtagctt ttttgctgaa gttgcttcag
     7621 cgcggcggcg tcctgctctt cggcactcgg cttattaaat tgcgattgca ggaagttcac
     7681 catctgattg agacggatat ccccgccacc aatcgccgcc agcaactcgt cgacatcatt
     7741 aaagttgtaa cgcggcagca gatgtttttc tgcttctttc aggctgatcc ccagatgttc
     7801 cagctcgtcg tcaaggattt gccgcccagc cagaatgttt ttgtcacggt cctgtttacg
     7861 gaaccaggcg tgaattttcg aacgcccacg gctggttgtg acgtaaccga ggtttgggtt
     7921 taaccagtca cggctggggt tcggctgttt ctgggtgata atttcaatct ggtcgcccat
     7981 ctgcagctgg taggtgaacg gcacaatgcg cccgccaatt tttgccccga tgcagcggtg
     8041 tccgacatca ctgtggatgt ggtaagcgaa gtccagcggc gttgatcccg caggcaaatc
     8101 aacgacatca cctttcggcg taaagacata cacccggtcg tcaaagacct ggctgcgtac
     8161 ttcgtcgagc atttcgccgg aatcagccat ctcttcctgc cacgcaatca gtttacgcag
     8221 ccaggcaatc cggtcttcat gtcccgaacg tgcgccgcca gctgccgcgc cctctttata
     8281 tttccagtgc gcagcaacac ccaactctgc atcttcatgc atctgtttgg tgcggatttg
     8341 gatctcaacg gttttgccac ctggccccag aaccacggta tgaatagact gataaccgtt
     8401 tggtttcggg ttagcgacat aatcgtcaaa ctcatccggc aggtggcgat agtgagtgtg
     8461 cactatcccc agtgcggcat aacaatcctg taaacgctcg gcgacaatac gtaccgcacg
     8521 cacatcaaac agctcatcga aggcgaggtt ctttttctgc attttgcgcc agatgctgta
     8581 gatgtgtttc ggacggccat acacttcagc tttaacgcct tcagctttca tctcagcgcg
     8641 cagatgaccg acaaactctt cgatatagtg ttcgcggtcg agacggcgtt catgcagcag
     8701 ttttgcgatg cgtttgtatt cggtcgggtg cagataacgg aagcagtaat cttccagctc
     8761 ccatttcagt tgcccaatcc caagacggtt cgccaacggc gcgtagatat tggtgcactc
     8821 ttttgccgcc agtacgcgtt catcttccgg cgcatctttt acttcgcgca gatgagcaat
     8881 acgctccgcc agtttgatga ccacgcagcg aaaatcatcg accatcgcca ataacatccg
     8941 gcgaacgtta tcgacctgtt cggaggaaac agaatcagtg tgcgtcgctt tcagctggcg
     9001 gatcgccgcc atatcacgca cgccgtgaat aaggttaacg acagacttac cgacgctctc
     9061 acgcagcaca tcttcgctga ctacgttggc atcggccaga gggaacagca gcgccgcccg
     9121 cagcgtgtca atgtccatac ttaatgtcga gaggatctcc accatctcaa caccacgcca
     9181 caataacaga ctggcatccg gatgcccctg cgtctgctgc agacaatacg cccaggtttc
     9241 ggctaagcac tcacacgact tctggctggt aatacccaga cttgcgatcc atttttccgg
     9301 atcaaatcca ccagccttat tgatatgtgc acttcttacc gcaaccattg tcctctcctt
     9361 tagggaccag acctgccgaa atcggcaaat cgtaactatt taacgcgcga gaaaagtacc
     9421 atcgattcca gatgtcccgt gtgtgggaac atatccagca tcgccagtcg cgcaatggta
     9481 tatcctgctt ttaataacgc ttcgctatcc cgagccagcg ttgcagggtt acaggataca
     9541 taaactatac gaataggttc cagttttata atttgctgca taacacctgc ggcacctgct
     9601 cgcgccgggt ccagcaacac tttatcgaag ccgtttttcg cccacggctg ctttgtgaca
     9661 tcttcttcaa gattttcgtg ataaaacgtc acattctgta agccattaag acgcgcattc
     9721 tgctggcctt tttccaccag cgccggaaca ccttctacac cgaccacact ggcagcttgt
     9781 gtcgccaatg gcagtgtaaa gttgcccata ccgcagaaca gatccagtac gcgatcttca
     9841 ggttgcacat ccagccattc caacgcactc gctaccattt tttggttcac acccgcattg
     9901 acctgaataa aatcgcgcgg gctaaaagtt aagcgcaacc cgttagagtc ataccagggc
     9961 atctcaccag agacggtttc gagtatctca ctatcggggg cgagatacag atccaggcct
    10021 tcagaatgcg aaaagcgttc cagtttttcg cgatctgccg aacttagcgg tgcggtatgg
    10081 cgcaaaatca tcagcgtgct gctggttgcc tgtaccagtt caacatgacc aagatggcgc
    10141 attgcttgta agctgcccag gcatgccctg actttgggca gcaatgcttc aagttggggc
    10201 actaaaatgg gacattgttt aacgtcgaca atgtcactgg agcccgcttt gcgaagcccc
    10261 atctgaagtt gctgtgtttt cggtaagtag ttcagactta aacgcgcgcg acggcgatag
    10321 ccccagggaa catcggcgat cacttcagag acttcgtgtt tcattaatcg ggcgagtgcc
    10381 gcacttttgc ttcgctgctg taaatccacg ctggcgtgtt gttgctgaca gccgccgcat
    10441 actccaaaat gaggacagcg tggcgtttcg cgttccgggc tatcgcttaa ccggcgtacg
    10501 actttagcgc gggcatactg ttttttatct tcagtaacag taacttccgc gttttcctgc
    10561 ggcaataatc cggggataaa tagcgttttg ccgttatgtc gcgccacgcc ctgaccaaaa
    10621 gagtcgaggt cgttgactga aacggttatg atctgacgcg tcgtcgtgcg tcgttttgca
    10681 gagtagaatt gcgccattgg cgagactttc tcaatttaac agtgtgacct taattgtccc
    10741 ataacggaac tccatgacca actacagcct gcgcgcacgc atgatgattc tgatcctggc
    10801 accgaccgtc cttattggtt tattgctgag tatctttttc gtcgtgcatc gctataacga
    10861 cttgcagcgt caactggaag atgccggtgc cagcattatt gagccgcttg cagtttctac
    10921 tgaatatggc atgagcctgc aaaatcgcga atctatcggt cagttaataa gcgtactgca
    10981 tcgtcgccat tccgatattg ttcgcgcgat ttcggtttat gatgaaaata accgactctt
    11041 tgtcacctcc aattttcatc ttgatccctc atcaatgcag ctcggcagca acgtgccgtt
    11101 tcctcgccag ctcactgtca ctcgtgacgg cgatattatg atcctccgca cgccgattat
    11161 ttctgagagt tactcccccg acgaatcgcc cagtagcgat gccaaaaata gtcaaaatat
    11221 gttgggatat attgcgcttg agctggatct taaatcggtt cgcttgcagc aatataaaga
    11281 gatctttatt tccagcgtga tgatgctgtt ttgtatcggt attgcgctta tttttggctg
    11341 gcgcttaatg cgcgatgtaa ccggtccgat tcgcaacatg gtgaataccg tcgaccgcat
    11401 ccgtcgcggg caactcgaca gccgggtgga aggatttatg ctcggcgagc tggatatgct
    11461 gaaaaacggt atcaactcga tggcaatgtc gctggctgct tatcacgaag agatgcagca
    11521 caatatcgac caggcgacgt ccgatctgcg tgaaacgctg gagcagatgg aaattcagaa
    11581 cgttgagttg gatctggcga aaaagcgcgc ccaggaagcg gcgcgtatta aatccgagtt
    11641 tctggcaaat atgtcacacg agctgcgtac accactgaat ggtgttattg gctttacccg
    11701 cctgacgctg aaaacagaat taacaccaac gcagcgcgat cacctgaata cgattgaacg
    11761 ttcggcaaat aatttgctgg caattattaa tgatgttctc gacttctcga aactggaagc
    11821 aggtaagctg attctggaaa gtattccatt cccactacgc agcacgctgg atgaagtcgt
    11881 tactctgctg gcacattctt ctcacgataa agggttggaa ctgacgctca atattaaaag
    11941 cgacgtgcct gataacgtga tcggcgaccc actgcgatta cagcaaatca tcactaacct
    12001 ggtggggaat gcaattaaat tcaccgagaa tggcaacatt gatattctgg tagaaaaacg
    12061 tgcgctgagt aataccaaag tgcagattga agtgcagatt cgggataccg gcattggtat
    12121 tcctgaacgc gatcaatcgc gcttattcca ggccttccga caggctgatg ccagtatttc
    12181 ccgccgtcat ggtggcaccg ggctggggct ggtgattaca caaaaactgg ttaatgaaat
    12241 gggcggcgat atttcgttcc atagccagcc gaatcgcggt tcaactttct ggttccacat
    12301 taatctcgat ctgaacccga acattattat cgaagggcca tccacccagt gcctcgcagg
    12361 taagcgcctg gcctatgtcg aaccaaactc cgcagcagcg caatgcacgc tggatatttt
    12421 aagtgaaacg ccgctggaag tggtttatag cccaacgttc tccgcgctgc ctcccgcgca
    12481 ttacgacatg atgttgttag gcatcgcggt gaccttccgc gagccgctaa caatgcaaca
    12541 tgagcgatta gcgaaagcgg tatcgatgac cgatttcctg atgctggcac ttccttgcca
    12601 tgcacaagtc aatgctgaaa aactcaagca agatggtatc ggcgcgtgtc tgctgaaacc
    12661 attaacacct acacgcctgt tgcctgccct gacggaattt tgtcatcaca aacaaaacac
    12721 gcttttgcct gtaaccgatg aaagtaagct ggcaatgaca gtcatggcgg ttgatgacaa
    12781 ccccgctaac ctgaaactta tcggcgcatt gctggaagat atggtgcaac atgtggaact
    12841 ttgcgatagc gggcatcagg cggttgaacg ggcgaaacag atgccgttcg atttgatctt
    12901 aatggatatt caaatgccgg acatggatgg cattcgggcc tgcgaactca tccaccagct
    12961 cccccatcag caacaaacgc cggttatcgc ggtaacggcg catgcaatgg ccgggcaaaa
    13021 agagaagctg cttggcgcag ggatgagcga ttatctggcg aaaccgattg aagaagagcg
    13081 attgcataat ttgttgttgc gctacaagcc tggcagcggt atttcctctc gcgtcgtgac
    13141 gcccgaagtc aacgaaattg tggtgaaccc gaatgcgacc ctcgactggc aactggcact
    13201 acggcaggca gcaggaaaaa ccgatttagc gcgcgatatg ctgcaaatgt tactcgattt
    13261 cctgcctgaa gttcgcaaca aagttgagga acagctggtt ggagaaaacc cggaaggcct
    13321 ggttgatttg attcataaac tgcatggcag ttgcggctat agcggtgtgc cgcgtatgaa
    13381 gaatctctgc caactgatcg aacaacagct acgtagcggt actaaagaag aagatttgga
    13441 gccggagctg ctggaactgt tggacgagat ggataatgtc gcgcgcgaag ccagcaaaat
    13501 tctcgggtaa cggacgtctt gtcgagtagc aatcggcttt ttatgacgct ggtttcagat
    13561 tggtgacaaa gtgcctgtgt ttatgccgga tgcggcgtta acgccttatc cggcctacaa
    13621 aaccaattaa attcaatgaa ttaaaaaatg atgtagacct gatacatagc acaacaggct
    13681 attttgcgtt tagcatcagt ctcaagccgg ctccagatag agccggtttt gtttttctgt
    13741 cttaacgcac catgcacggg cgcttgttat cgaacgtcca gccaggaatc agatactgca
    13801 ttcccatcgc atcgtcacgc gcgcaaagcc cgtgtttctg atacagctca tgggctttca
    13861 tcacttgatc catatcgatt tctacaccca gccccggttt ttccggcacc tgaaccagac
    13921 cgcctttgat ctcaaacggt tctttggtca agcgctgatt gccttcctgc caaatccagt
    13981 gcgtatcaat cgcggtgatt ttacccggtg cagcggcggc aacatgggta aacatcgcca
    14041 gggaaatatc gaagtggttg tttgagtgtg aaccccaggt caggccaaat tcatggcaca
    14101 tttgcgccac acgtaccgaa ccttgcatcg tccagaaatg cggatccgcc agcgggatat
    14161 caacggattg cagggagagc gtatggccca tctgccgcca gtcggtggcg atcatattgg
    14221 ttgcggtcgg caggccagtt gcgcgacgga actctgccat cacttcacgc ccggagaaac
    14281 cttgctccgc accacacgga tcttctgcat aagccagcga ccctttcagg tatttaccaa
    14341 ttttaatcgc ttcgttcagc gaccaggcac cgttaggatc gagcgtaata cgcgcctgcg
    14401 ggaagcgttg cgccagtgcc acaatagact cggcctcttc ttccccggcc agtacaccgc
    14461 ctttcagttt gaaatcgttg aagccatatt tttcatacgc cgcttccgcc aggcgcacca
    14521 ccgcatccgg cgtcatcgct tcttcatgac gcaggcgata ccagtcgcat gagtcatccg
    14581 gctggctttg atacggcagc ggtgtggctt tgcgatcacc gacgaagaac agataaccga
    14641 gcatttcgac ttcgctacgc tgttgaccat cgcccagcag ggatgccacg tttaccccca
    14701 gatgctgccc cagcagatcc agcattgccg cttctatccc ggtaactaca tgaatagtgg
    14761 tacgcaaatc aaatgtctgc aaaccgcgcc caccagcatc acgatcggca aaagtattac
    14821 gcaccagcgt cagaacgttt ttgtattcac ccagcgtttt acctaccacc agcggaatcg
    14881 catcttccag cgttttacgg attttctcgc cgccgggaat ttcccctacg ccagtgtgac
    14941 cagaattatc tttgataatc ataatattac gcgtaaagaa cggtgcgtgt gcaccactca
    15001 gattcatcag catactgtca tgacccgcca ccgggatgac ctgcatttca gtaacaacag
    15061 gcgtcgtaaa ttgagaactc atatttatgt cctttttcag aatcaatgac ggccgaaaac
    15121 gggacgttta cggtcaaagg tccagccggg gatcaggtac tgcatcggac ctgcgtcgtt
    15181 acgcgcaccg ccaggcagac gtttataggc ctcatgtgcc ttttgtacct gtttccagtc
    15241 cagttccacg cccagaccgg gcgcatcagg aacggcaatt tttccgtttt taatctccag
    15301 cggatttttg gtcaggcgac aatcgccctc ctgccaaatc cagtgggtat cgatagcggt
    15361 aggattaccc ggtgccgccg cgcccacatg ggtaaacatc gccagagaga tatcgaaatg
    15421 gttattagaa tggcagcccc aggtcagccc ccagtcgtcg caaagctgcg ccacacggac
    15481 tgcaccggaa agcgtccaga agtgcggatc ggcaagtgga atatctaccg cattgagcat
    15541 caccgcatga cccatttcgc gccagttggt ggcgatcatg ttagtcgcga cgggcaagcc
    15601 ggtcgcccgc cgaaactccg ccataacttc acgaccggag aaaccctgtt ctgcgccgca
    15661 tggatcttcg gcataggtaa gaacatcatt cagccctttg catagagaaa tggcttcatc
    15721 aagtagccag gcaccgttgg gatcaacggt aatccgcgca tcagggaagc gtttcttcaa
    15781 tgcacgaaca gtgttgattt cttgctcgcc aggtaacacc ccgcccttaa gtttgaaatc
    15841 tttaaagcca tagcgatcct gtgaggcttc cgccagacgc acaacggctt cgctgttcat
    15901 cgctttctga tggcgcaact gataccactc atggttgccc ggcgtatttt ccagataagg
    15961 aagatcggtt ttggtccgat caccgatata aaacagataa ccgaggacgg taatagtctc
    16021 gcgttgcttg cctggcccca acagttcgca gaccggaaca ttcagcgcct tacctagcag
    16081 gtcaagcaag gcggcttcca gcgccgccac ggcattaacg cgcaattcaa aagtctaggc
    16141 acctttgccg aaggtatcaa aatcggctgc ctgattacct ttatgcacct gctgaaccac
    16201 tttattcagg cgcgcaactt cctggcccag aaccatcgga atagcatcga ccagtgtttg
    16261 ataaatcacc tctccgcccg gcgcttcacc aatgccggta tgcccggcgt tatcggtgag
    16321 taccacaata ttgcgggtga aatatgcgtt atgtgcccca ccaatattaa gcaacatgct
    16381 atcgtgcccg gcgaccggaa tgactttcat atcagtaata acaggactgg attgtgtcgt
    16441 catcttattg ccccgcgaca ggtttcagct cgatacgctt gatatcgccc accagcacca
    16501 ggtagctcag taccgcgatt aaggcatgaa caccaacata aatcagcgcc ccattaaagg
    16561 agccagtcgt gccaacgata taaccaattg cgattggcgt gacgatgcca gaaatgttac
    16621 cgaacatgtt gaacaggcca ccggaaagac cgctgatctc ttttggcgcg gtatctgcca
    16681 ttactgccca acccagcgcc ccgatgccct taccgaagaa ggccagcgcc ataaagccga
    16741 tgatcatcca ctcaacgttg acgtagttgc agaacaccat caccatcgac agcaacatgc
    16801 ccattacgat cggtgtttta cgcgcaatgt tcagcgatcc cgtgcggcgc atcagccagt
    16861 cggaaataat cccacccagc acaccgccga taaaaccgca aaccgccgga acggaagcca
    16921 caaagcccgc tttcagaatc gacatcccac gcgcctgcac cagataaacc ggaaaccagg
    16981 taatgaaaaa gtaagtcagg gcgttgatac agtactgacc gatataaacg ccgatcatca
    17041 tccgtgaccc gagcagttgt ttgatctgcc cccacttcac gctgaacggc actttaactt
    17101 tggtgttttg ctgatccata ttgatcagcg cgccacccgc ggcgatgtac tccagctctt
    17161 tctgatttac ccccggatgt tgatttggct cgtggatgac tttcaaccag ataaagctga
    17221 tgacaatccc cagaccgccc ataaagaaga agacgtgtga ccagcccact tcatgcgtca
    17281 gccagcccat aatcggcgcg aagatcaccg ttgcgaagta ttgagcggag ttaaaaatcg
    17341 acaccgccgt tcccctttcc tgcgccggaa accaggccgc aacaatgcga ctgttgccgg
    17401 ggaaagatgg cgcttcagca agcccgacca ggaagcgcag agtaaacagg gcaacgataa
    17461 tgccgaatcc actaaagata tcgacgaagc cttgcagcaa ggtaaacatc gaccagataa
    17521 agatcgacca gaagtagacg cgttttgaac caaaacgatc cagcaaccaa ccaccaggga
    17581 tctgcccgat aacataagcc catgagaagg cagagaacac atagcccatt cccacgggat
    17641 caaggccgat atctttggcc atttccgaac cggcaataga aagcgtagcg cggtcgccgt
    17701 agttgaagga tgtgacgata aacaacatca ccactatcca gtaacgagca ttcgtgcgtt
    17761 tttccacact gctcgcagcc tgacttaaag aactcgttgt tgcactcctg aaaattcgcg
    17821 ttagccacgc tcactctgga ctgcgacata gccaggaaat cagaggtgac gtagggtgtt
    17881 ttttgccgtt tttataggtc gttcgccgaa tacggcgcgt gtttatatct ggcaatagca
    17941 gtataaaaag cgcgccatag cggctcaccg tgcaacaaca caacattaat gcgttcaatg
    18001 aggcccgatt ttggcattag ccctggacgg tggaatccac ttcacggaaa tgaaaacaag
    18061 aacaagaaag gaagggttaa aacaaagaaa taaagaagag tatgaaatgg atcgcttgac
    18121 tccaggcaaa cgccagtaaa aatccgcgct atgaagcagt ttttactggc atttgcctga
    18181 aaagattcga ttcagcaccg ctaaaacgac atttaccgct cgctgaacat atcaggacaa
    18241 cagcgtgccc cactgttcga cccacggatt tgattccgtt tccggttccg ggttctcact
    18301 ggcgtcaatc aacagcattt cgccaacccg ctgagcgctc tgttcctgca acaaggcatc
    18361 gaactgtttg ccgccattgc agaaatttac ataactgctg tcgccgagcg caatcacgcc
    18421 ataacgcaga ttcggctgga agcccagact atctttgatt ccctgaaaga gcggcacaat
    18481 gctatcagga aggtcgccct gcccggtcgt ggacgtaacc accagaacat acttatcctg
    18541 ataaggcagc cagtcgctta attcaggatc ttcaaatacc gttgctttgt ggccctgtgc
    18601 ggtcagaatt gcttctgctt cttccgccac taacagcgaa tttccgtaca tggtgccgac
    18661 aaaaatacca atttccgcca taccgttttc tccctggatt aggaacttat ctctccatcc
    18721 tgacccgatg gcgcactgaa ctcaaccctt tcattttcag gaagcagacc gcgccagcca
    18781 aattgtgata acgcctgcat ccaggtgtcg tccaggcccg cgtgaatagt cagcggctcg
    18841 ccagtaaaag gatgcgtcaa tgacaactga ctggcatgta gcattaaccg ctggaggcca
    18901 aaatgctcag caccgctgcg attctggcgt aaatcgccat gtttgctatc gccaataatc
    18961 ggatgacgca aatgggcaag atgtcggcga agctgatgtt tgcgtccggt tttcggctcc
    19021 agttccacca ggccgtagcg cgtggtcggg taacgtccgg tcgctaccgg catttctacg
    19081 gtcgccagac cgcgataatg cgtcactgct ggctgcgggc ctttatcttc gcgggcaaat
    19141 ttatcagcga ttttgtccag ttcttccacc agtggataat ccagcaccgc ttcttccatc
    19201 aaccatccgc gcacaatcgc atggtaacgt ttctggattt ggtgctgttc aaactgttgt
    19261 gccagcagcc gtccggcctc gctggataat cccatcaaca acacaccaga agtgggtcgg
    19321 tccagacgat gagcagtaaa aacatgctgt cctatctggt cacgcacggt ttgcatgacc
    19381 actactttct cgtcgcgatc cagccagcta cggtgaacca gccagccgga gggtttattt
    19441 accgcaacca gccattcatc ctgatagagt atttccagca ttagctcgca tcatccgcaa
    19501 aaagagcatc cagtttttcc aactcagcca gaataagcgc gtgttgcgga tggtccgtcg
    19561 ccagcgccat ttcataatag ggtgcaacag caaaagcgcc cggtaacggc tggttgttat
    19621 ttaacaaatc gtgcattcgc gggatcagca cccactgcaa ccactccagt ggttccatgg
    19681 tgtccataaa gaacggttgg gtactattaa attgatgcgg ctggggttca tcgtttcgcc
    19741 agtgctgatg ttcacgcagt aacgcttcaa gcgcctgcaa ctggagacga acgcggtcat
    19801 gagtggtcat aaagcaacct caataagaaa aactgccgcg aaggatagca ggaataaaaa
    19861 aagggagcac tgtattcaca gcgctcccgg ttcgtttcgc agcattccag ctacttttgt
    19921 tgctccctgc tcatccttga caacttttcc tctggccttg cggccaatcg ttcatcctga
    19981 actattgctt cctgctcaca ccaccccgat gtgatacttc atcctgaagt gtccttggcc
    20041 ttcctgacca gccgaatcat cctgaccggt tctcattctc catcctggag gtgtccttta
    20101 acgcgtcctg cgtcatcctc ttcgcttcat ccagaagcct ttccctgaaa caccatcttg
    20161 gtgtgtcctg cagaagtgtc atcatcctga tgttcacttc gttgtctgac tccctgtcga
    20221 cgaagataga atcgtctttt tcgcgaagtc ttacaaggcg cttacagaca atggcttaag
    20281 gaaaatttca tatgaaagtt aagaattaac aatcaacatt ttgattttaa atgaaaataa
    20341 cgattcttat ctttttaagt attcgcttat ttcctggcga tctcctacag agtctgtaag
    20401 agatctctca caaccagatg gggtatttgg attacagaag aggcttaagt tgattaagga
    20461 attccgcaag atttgaggct aaatgcgtcc gtttacgtgt tcccagcgtc tctttgcaca
    20521 cttcaccgga gagattacac accgagatga cctctaactc ttcttccagc gtcgcgataa
    20581 atagcgtggg cggcagtttt agccttttct gagtcaccag atgaccaatc agattttcct
    20641 gcacccgacg gaagtcgtct tcactccagg tttgcagcaa tgtcagtttg atatcgccaa
    20701 actgcgcgtg catatccccg gcaaactgag tcgtataaaa ggtatgaatt gtgggttgta
    20761 tcacaatatc aaaagcgcgt tcaaccgcgt ttacattttg ttccccggta aacggctggg
    20821 gttgccagta tacggcatct tcggtagttg aaataatgca cggtgaagga acaccgtaca
    20881 gttcctcact taacggccag cttttatgct cttcatgcca cgcatcgcag tagcgtgcag
    20941 taaaatcttt cagggcttgt gcggtcaaat cgtccactaa tttctctctt cacttaaacc
    21001 agatacactt gtcgtttagt ttatctggtt tatgacggtg aaacatgtct tcttatgcaa
    21061 accatcaggc acttgcgggc ctgactcttg gaaaatcaac cgattaccgg gatacctatg
    21121 acgccagcct cctgcaaggc gttccacgca gcctgaatcg cgacccgctg ggtctgaaag
    21181 cggataacct gccttttcac ggtacggata tctggacgct gtatgaactt tcctggctga
    21241 atgcgaaagg tttgccgcag gtcgctgtcg gtcatgttga acttgattac accagcgtaa
    21301 atctgattga gtcgaagagt tttaagctct atctcaacag ttttaaccag acgcgtttta
    21361 ataactggga tgaggtgcgc cagacgctgg agcgcgactt aagcacttgc gctcagggta
    21421 agattagcgt ggcgttatat cgtcttgatg aactggaagg ccagccgata ggtcatttta
    21481 atggcacttg cattgatgac caggatatca ctatcgataa ctatgaattc actactgact
    21541 atctggagaa tgccacctgt ggtgaaaaag tagtggaaga gacgcttgtc agccacctgc
    21601 tgaaatcaaa ctgcctgatc acccatcaac cagattgggg ttcgatccaa attcagtatc
    21661 gtggacgcca aattgacaga gaaaaactgc tgcgttacct ggtctcattc cgtcatcaca
    21721 acgagttcca cgaacagtgc gtggaacgca tctttaatga cctgttacgc ttctgccagc
    21781 cagaaaaatt gagcgtttac gcacgttata cccgtcgtgg cggtctggac attaacccgt
    21841 ggcgcagtaa tagcgatttt gttccatcga ccacaagact ggttcggcaa taaatttttt
    21901 ctcaattttg cgtgctggat tcacgcagaa ggttgtgaaa ggtcatcagg cagggctatt
    21961 gtaatcaaag ggaatgacga tattcgtccc ataaggagtt tttcttgatt acacatatta
    22021 gcccgcttgg ctccatggat atgttgtcgc agctggaagt ggatatgctt aaacgcaccg
    22081 ccagcagcga cctctatcaa ctgtttcgca actgttcact tgccgtactg aactccggta
    22141 gtttgaccga taacagcaaa gaattgctgt ctcgttttga aaatttcgat attaacgtct
    22201 tgcgccgtga acgcggcgta aagctggaac tgattaatcc cccggaagag gcttttgtcg
    22261 atgggcgaat tattcgcgct ttgcaggcca acttgttcgc ggtcctgcgt gacattctct
    22321 tcgtttacgg gcaaatccat aacaccgttc gttttcccaa cctgaatctc gacaactccg
    22381 tccacatcac taacctggtc ttttccatct tgcgtaacgc tcgcgcgctg catgtgggtg
    22441 aagcgccaaa tatggtggtc tgctggggcg gtcactcaat taacgaaaac gagtatttgt
    22501 atgcccgtcg cgtcggaaac cagctgggcc tgcgtgagct gaatatctgc accggctgtg
    22561 gtccgggagc gatggaagcg ccgatgaaag gtgctgcggt cggacacgcg cagcagcgtt
    22621 acaaagacag tcgttttatt ggtatgacag agccgtcgat tatcgccgct gaaccgccta
    22681 acccgctggt caacgaattg atcatcatgc cagatatcga aaaacgtctg gaagcgtttg
    22741 tccgtatcgc tcacggtatc attatcttcc ctggcggtgt gggtacggca gaagagttgc
    22801 tgtatttgct gggaatttta atgaacccgg ccaacaaaga tcaggtttta ccattgatcc
    22861 tcaccggccc gaaagagagc gccgactact tccgcgtact ggacgagttt gtcgtgcata
    22921 cgctgggtga aaacgcgcgc cgccattacc gcatcatcat tgatgacgcc gctgaagtcg
    22981 ctcgtcagat gaaaaaatcg atgccgctgg tgaaagaaaa tcgccgcgac acaggcgatg
    23041 cctacagctt taactggtca atgcgcattg cgccagattt gcaaatgccg tttgagccgt
    23101 ctcacgagaa tatggctaat ctgaagcttt acccggatca acccgttgaa gtgctagctg
    23161 ccgacctgcg ccgtgtgttc tccggtattg tggcgggtaa cgtaaaagaa gtcggtattc
    23221 gcgccattga agagtttggt ccttacaaaa tcaacggcga taaagagatt atgcgtcgta
    23281 tggacgacct gctacagggt tttgttgccc agcatcgtat gaagttgcca ggctcagcct
    23341 acatcccttg ctacgaaatc tgcacgtaat ctcccctccc ccggtgacgt ttgttgccgg
    23401 gttttctcgt ttttggtcac ttactcatca actcatttca tttgttatat gaatgtttct
    23461 taccaccctc acgcgacaaa tatcatcaca gttaatatgt catacaattt atgttgcaac
    23521 gcaaacgttt ccctattttc ataaaccgta ttttatcgct atgaaaaaga aattatcgcc
    23581 atgattaact aaaagtattg attttttcag ttcaacctac atatattgcg cgccccggaa
    23641 gaagtcagat gtcgtttaat gggcaaatat tgcccttaaa ttctctttta cttttgattt
    23701 acagagtaaa gcgttgggat aatctatctt ccaagtagat tattgtattt gagatcaaga
    23761 tcactgatag atacataact tgtgtgtatc tttccgccct caaattatta cggcggtaaa
    23821 tgattaagcc atcgccgata gacagatttc atttttacgg tcaggcacct tcccgggctg
    23881 aactggctaa aagctgaatt atttgcattc ctccaggaga aatagatgga aacgactcaa
    23941 accagcacga ttgcgtcgaa agactctcgt agtgcctggc gcaagacaga caccatgtgg
    24001 atgctgggcc tttacggcac ggcaatcggc gcgggcgtgc tgttcctgcc aatcaacgcc
    24061 ggtgttggcg gtatgatccc gctgatcatc atggctatcc ttgcgttccc gatgacgttt
    24121 tttgctcacc gcggcctgac tcgcttcgta ctgtctggta aaaacccggg cgaagacatc
    24181 accgaggttg tagaagaaca ctttggtatt ggcgcaggta aactgattac cctgctctac
    24241 ttcttcgcta tctacccgat cctgctggtt tatagcgtgg caatcaccaa tacagttgaa
    24301 agcttcatgt ctcaccagct gggtatgacg ccaccgccgc gtgcgattct gtcgctgatc
    24361 ctgatcgtgg gtatgatgac catcgttcgc ttcggtgagc agatgatcgt taaagcgatg
    24421 agtattctgg tgttcccgtt tgttggcgta ttgatgctgc tggctctgta cctgatcccg
    24481 cagtggaacg gcgcagcact ggaaacgctg tctctggaca ctgcatctgc aaccggaaac
    24541 ggtctgtgga tgaccctgtg gctggcaatt ccggtaatgg tgttctcgtt caaccactct
    24601 ccgatcatct cttctttcgc cgttgcgaag cgtgaagagt acggcgatat ggcagaacag
    24661 aaatgctcga agatcctggc attcgcacac atcatgatgg tgctgaccgt aatgttcttc
    24721 gtcttcagct gtgtactgag cctgactccg gcagacctgg ctgcggctaa agagcagaac
    24781 atctcgattc tgtcttacct ggctaaccac tttaacgtac cggttatcgc gtggatggct
    24841 ccgattatcg cgattatcgc tatcaccaaa tccttcctcg gccactacct gggcgcacgt
    24901 gaaggcttca acggtatggt gattaaatct ctgcgtggta aaggtaagtc tatcgaaatc
    24961 aacaagctga accgtatcac tgcgctgttc atgctggtaa cgacctggat tgttgccacc
    25021 ctgaacccga gcatcctggg tatgattgaa accctgggcg gtccaatcat cgcgatgatc
    25081 ctgttcctga tgccgatgta cgcaattcag aaagtaccgg caatgcgtaa gtacagcggt
    25141 cacatcagca acgtattcgt tgtcgtgatg ggtctgattg caatctccgc aatcttctac
    25201 tctctgttca gctaagtcct ttcgcgccac tttcgggcgg cgcttcctcc gttttaacgc
    25261 gatgtatttc ctatgattag cgtattcgat attttcaaaa tcggcattgg cccttccagt
    25321 tctcataccg ttggaccaat gaaagcgggt aaacaattta ccgacgatct gattgcccgt
    25381 aacctgctta aagacgtgac ccgcgtggtg gttgacgtgt acggctcgct ctctctgacc
    25441 ggtaaaggcc accacactga tatcgccatt attatgggcc tggcgggtaa cctgccggat
    25501 accgtggata tcgattccat ccctggtttt attcaggatg tgaatactca tggtcgcctg
    25561 atgctggcaa acggtcagca tgaagtggag ttcccggttg atcagtgcat gaacttccac
    25621 gccgacaacc tttctctgca tgaaaacggt atgcgcatta ccgcgctggc aggcgataaa
    25681 gtcgtttaca gccagactta ctactctatt ggcggtggct ttatcgttga tgaagagcat
    25741 tttggccagc aggatagcgc accggttgaa gttccttatc cgtacagttc agcagccgat
    25801 ctgcaaaaac attgtcagga aaccgggctg tcactctctg gcctgatgat gaaaaacgag
    25861 ctagcgctgc acagcaaaga agagctggaa cagcacctgg cgaacgtatg ggaagtcatg
    25921 cgtggcggta ttgagcgcgg tatttccacc gaaggcgtgt tgcctggcaa actgcgcgtt
    25981 ccacgccgtg ctgcggcact acgccggatg ctggtcagcc aggataaaac caccactgac
    26041 ccgatggcgg ttgttgactg gatcaacatg tttgcactgg cagtgaacga agagaacgct
    26101 gctggcggac gcgtggtgac tgcgccgact aacggtgcgt gcgggattat cccggcagtg
    26161 ctggcgtact acgacaagtt tatccgcgaa gtgaacgcta actcactggc tcgttacctg
    26221 ctggtagcca gtgccattgg ttctctttat aagatgaacg cgtcaatttc tggtgctgaa
    26281 gtcggctgcc agggtgaagt tggtgtggcg tgctcaatgg cggcggctgg tctggcagaa
    26341 ctgttaggtg caagcccggc gcaggtgtgc atcgcggcgg aaatcgccat ggagcacaac
    26401 ctcggtctga cgtgtgaccc ggtcgccgga caggtccagg tgccatgcat cgagcgtaac
    26461 gccattgcgg cagtaaaagc ggtgaacgcc gcacgtatgg cgctacgccg taccagcgag
    26521 ccgcgcgtct gcctcgataa agttatcgaa accatgtacg aaacaggtaa agatatgaac
    26581 gccaagtacc gcgaaacctc tcgcggcggc ctggcaatga agatcgttgc ctgcgattaa
    26641 tcgctctcca gaggcctcgt tttgcgaggc ctcttcccga tttctcatcc agccgtagcc
    26701 tgttccggca tcgaatgtta cccttatcgc ctgatcttta agggggttat cgtggctgtt
    26761 catttgctta ttgtcgatgc actgaatctt attcgtcgca ttcatgccgt tcagggatcg
    26821 ccctgtgtcg aaacctgcca gcatgcgctc gatcagctca ttatgcacag ccagccaacc
    26881 cacgcggtcg ccgtttttga tgatgaaaac cgcagtagcg gctggcgtca tcagcgttta
    26941 ccagattaca aagcgggtcg accgccaatg ccggaagagt tgcacgacga gatgcctgca
    27001 ttacgcgccg cctttgagca acgcggcgtc ccgtgctggt caaccagcgg caacgaagcc
    27061 gatgacttag ccgccacgct ggcggtcaaa gtgacacagg ccgggcatca ggcaacgatt
    27121 gtttcgacag ataaaggcta ctgtcagtta ctttcaccga cattacgtat tcgtgattac
    27181 ttccagaaac gttggctgga tgcgccattt atcgataaag aatttggcgt tcaaccgcag
    27241 cagttgcccg attactgggg acttgcgggg atcagcagtt caaaggtacc gggtgttgcg
    27301 ggaatcggac caaaaagcgc cacgcagctg ctggtcgagt ttcagagtct ggaagggata
    27361 tatgagaatc tggatgcggt tgccgaaaag tggcgcaaaa aattagaaac ccataaagag
    27421 atggcgtttc tgtgccgcga tattgcccgc ttacaaaccg atttgcatat cgacggcaat
    27481 ttacagcaat tgcggttggt acggtaacag cgagccggat gcaaacgatt atcaacacat
    27541 tgaatttaat gcacttatat accggataag acgcggctag cgtcgtatcc ggcattatca
    27601 catcagcgca tttaccaggc ggtatggtaa agctctacaa tatcctcaag cgttgcttca
    27661 cgcgggttgc caccggtaca aacatcatcc agtgccgcct gcgccagtgc cggaatgtct
    27721 tccttgcgta caccaacatc acgcaaatgt ggcggaatac cgacatcacg gttgagagca
    27781 aacaccgctt caacagcggc attacgcgcc tcttccagcc actttcacgc tcataacgcg
    27841 cgcgatatcg cggtacttct caccggtaaa gtcagcgtta tagctcatga catgcggtaa
    27901 caggatggcg ttcgcaacac cgtgtggagt gttgtaaaac gcgcccagtg gatgcgccat
    27961 accatgcacc aaccctaacc caacattcga gaagcccata cccgcaacat actgcccgag
    28021 cgccatttct tctccggcat ccttatcacc agcaaccgat cctcgcagcg ccccagcaat
    28081 gatttcaatc gctttaatgt gcagtgcatc ggttagcgcc cacgcgccac gggtaatata
    28141 cccctcaata gcatgagtga gcgcatcgac acccgtcgca gctttcagcg ctggaggcat
    28201 accatccatc atgtcagcgt caataaacgc cacctgcggg atatcatgcg gatcaacgca
    28261 aacaaacttg cgccgtttct cttcgtcagt gatcacgtag ttaatggtca cttctgccgc
    28321 agtacctgct gtggtaggaa ttgccagaat cggtacactg ggtttattgg tcggggaaag
    28381 cccttccagg ctacgcacat cggcaaactc cgggttgttg ctgataatgc caatcgcttt
    28441 acaagtatcc tgtggagaac caccaccaat agcgatcagg taatccgcgc cgctattctg
    28501 gaatacaccg agcccttctt tgacgacagt aattgttggg ttgggcacta cgccgtcgta
    28561 aatcgcccat gccagccctg cagcatccat cttatcggtc actttcgcca ccacgccgca
    28621 ttgcaccagc gttttatcgg tgacgatcag cgccttctga taaccacggc gtttcacctc
    28681 atcggttaaa gccccaacag caccccgacc aaaccatgcc gtttcgttca gaatcattct
    28741 gttagccatc atccttctcc ttgttgcttt acgaaattac tcttcaatcc gtaacccata
    28801 ggttttgaat ttctccagca ctacggcaat ctcttcatcg ctcagcactg gcaccgggtc
    28861 cgtaatcgcc agggtcgtca ggtaaagttg cgccagcact tcaacttcat gcgccagcca
    28921 taacgctttt tccagattca cctcacaagc gataagccca tgatgttgta acaaagttgc
    28981 cttacgattt ttgagagcca gcgcaacatg ttcagaaagt tcgcgtgttc caaaggtcgc
    29041 ataaggcgcg caaggaatag aattaccacc tgccgccgca atcatgtagt gaatagcggg
    29101 gatcggtcgg ttaagaatgg aaactgctgt gcaatgaacg gcatgattgt gaacaaccgc
    29161 gttggcatcc ggtctgcttt gataggccgc catatggaaa cgccattcgc ttgagggg
//
LOCUS       DADMHC010000033        29200 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.033, whole genome shotgun sequence.
ACCESSION   DADMHC010000033 DADMHC010000000
VERSION     DADMHC010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29200)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29200)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29200
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.033"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(1..1499)
                     /locus_tag="JNZ57_001181"
                     /pseudo
     CDS             complement(1..1499)
                     /locus_tag="JNZ57_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001343926.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
     gene            complement(1535..1837)
                     /locus_tag="JNZ57_001182"
     CDS             complement(1535..1837)
                     /locus_tag="JNZ57_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000239457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827470.1"
                     /translation="MVKKPQQGTIFAAAQRSDSYFVKCINMLSLYEKIKIRLIILFLL
                     AALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKDIERSALTLKDSLYL"
     gene            complement(1937..2848)
                     /gene="gsiD"
                     /locus_tag="JNZ57_001183"
     CDS             complement(1937..2848)
                     /gene="gsiD"
                     /locus_tag="JNZ57_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001236035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter permease GsiD"
                     /protein_id="HAY8827471.1"
                     /translation="MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAA
                     LFVILLIVVAIFARWIAPYDAENYFDYDNLNNGPSLQHWFGVDSLGRDIFSRVLVGAQ
                     ISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAVL
                     GSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDMTILLRHILPGT
                     VSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPA
                     LAIFLTVLAFNLLGDGLRDALDPKIKG"
     gene            complement(2851..3771)
                     /gene="gsiC"
                     /locus_tag="JNZ57_001184"
     CDS             complement(2851..3771)
                     /gene="gsiC"
                     /locus_tag="JNZ57_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter permease GsiC"
                     /protein_id="HAY8827472.1"
                     /translation="MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEAD
                     AQVIELVRQQLGLDQPLYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLT
                     ITSMVWAVIFGMAAGIIAAVWRNRWPDRLSMTIAVSGISFPAFALGMLLIQVFSVELG
                     WLPTVGADSWQHYILSSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWV
                     VLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQA
                     EILLFSLEFILINLVVDVLYAAINPAIRYK"
     gene            complement(3789..5327)
                     /gene="gsiB"
                     /locus_tag="JNZ57_001185"
     CDS             complement(3789..5327)
                     /gene="gsiB"
                     /locus_tag="JNZ57_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter substrate-binding
                     protein GsiB"
                     /protein_id="HAY8827473.1"
                     /translation="MARAVHRSGLVALGIATALMASCAFAAKDVVVAVGSNFTTLDPY
                     DANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAESYTVSDDGITYTVKLREGIKFQDGT
                     DFNAAAVKANLDRASDPANHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAH
                     PATAMISPAALEKYGKEIGFHPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSI
                     TWRPVADNNTRAAMLQTGEAQFAFPIPYEQAALLEKNKNIELMASPSIMQRYISMNVT
                     QKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKA
                     RELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEV
                     EGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQ
                     ALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFED
                     ADLQ"
     gene            complement(5347..7218)
                     /gene="gsiA"
                     /locus_tag="JNZ57_001186"
     CDS             complement(5347..7218)
                     /gene="gsiA"
                     /locus_tag="JNZ57_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415350.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter ATP-binding protein
                     GsiA"
                     /protein_id="HAY8827474.1"
                     /translation="MPHSDELDAGNVLAVENLNIAFMQDQQKIAAVRNLSFSLQRGET
                     LAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLQRRSREVIELSEQSAAQMRHVR
                     GADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQT
                     ILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM
                     SMGVIFITHDMGVVAEIADRVLVMYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQLG
                     AMKGLDYPRRFPLISLEHPAKQDPPIEQKTVVDGEPVLRVRNLVTRFPLRSGLLNRVT
                     REVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLS
                     PGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLRVHGLLPGKDAAARVAWLLERV
                     GLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLD
                     LQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLLAA
                     VPVAEPSRQRPQRVLLSDDLPSNIHLRGEEVAAVSLQCVGPGHYVAQPQSEYAFMRR"
     gene            complement(7205..8170)
                     /gene="iaaA"
                     /locus_tag="JNZ57_001187"
     CDS             complement(7205..8170)
                     /gene="iaaA"
                     /locus_tag="JNZ57_001187"
                     /EC_number="3.4.19.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-aspartyl-peptidase"
                     /protein_id="HAY8827475.1"
                     /translation="MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLE
                     AGESALDVVTEAVRLLEECPLFNAGIGAVFTRDETHELDACMMDGNTLKTGAVAGVSH
                     LRNPVLAARLVMEQSPHVMMIGEGAENFAFARGMERVSPEIFSTPLRYEQLLAARKEG
                     ATVLDHSGAPLDEKQKMGTVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGC
                     YANNASVAVSCTGTGEVFIRALAAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGG
                     LIAIGHEGNVALPFNTEGMYRAWGYAGDTPTTGIYREKGDTVATQ"
     gene            8374..9609
                     /gene="moeA"
                     /locus_tag="JNZ57_001188"
     CDS             8374..9609
                     /gene="moeA"
                     /locus_tag="JNZ57_001188"
                     /EC_number="2.10.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HAY8827476.1"
                     /translation="MEFTTGLMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDV
                     VSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGA
                     PVPEGCEAVVMQEQTEQTDNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAE
                     LPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGC
                     EVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKL
                     AIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVR
                     TASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGN
                     VDVGEWVEVEPFNALFGGL"
     gene            9609..10358
                     /gene="moeB"
                     /locus_tag="JNZ57_001189"
     CDS             9609..10358
                     /gene="moeB"
                     /locus_tag="JNZ57_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HAY8827477.1"
                     /translation="MAELSDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGC
                     AASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIA
                     ITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQ
                     ITVFTYQDGEPCYRCLSRLFGENALTCVEAGVMAPLIGVIGSLQAMEAIKLLAGYGKP
                     ASGKIVMYDAMTCQFREMKLMRNPGCEVCGQ"
     gene            complement(10434..11096)
                     /gene="fsa"
                     /locus_tag="JNZ57_001190"
     CDS             complement(10434..11096)
                     /gene="fsa"
                     /locus_tag="JNZ57_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HAY8827478.1"
                     /translation="MELYLDTSDVVAVKALSRIFPLAGVTTNPSIIAAGKKPLDVVLP
                     QLHEAMGGQGRLFAQVMATTAEGMVNDARKLRSIIADIVVKVPVTAEGLAAIKMLKAE
                     GIPTLGTAVYGAAQGLLSALAGAEYVAPYVNRIDAQGGSGIQTVTDLHQLLKMHAPQA
                     KVLAASFKNPRQALDCLLAGCESITLPLDVAQQMISYPAVDAAVAKFEQDWLGAFGRT
                     SI"
     gene            11227..12126
                     /locus_tag="JNZ57_001191"
     CDS             11227..12126
                     /locus_tag="JNZ57_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415345.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl-radical enzyme activating protein"
                     /protein_id="HAY8827479.1"
                     /translation="MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARTQDL
                     LYDARLCLEGCELCAKAAPEVIERALNGLLIHREKLTPEHLTALTDCCPTQALTVCGE
                     VKSVEEIMATVLRDKPFYDRSGGGLTLSGGEPFMQPEIATALLQACHEAGIHTAVETC
                     LHVPWKYIAPSLPYIDLFLADLKHIADAPFKQWTDGNAAKVLDNLKKLAAAGKKIIIR
                     VPLIQGFNADETSVKAITDFAADELHVGEIHFLPYHTLGINKYHLLNLPYDAPEKPLD
                     APDLLDFAQQYACQKGLTATLRG"
     gene            12132..14564
                     /locus_tag="JNZ57_001192"
     CDS             12132..14564
                     /locus_tag="JNZ57_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl radical protein"
                     /protein_id="HAY8827480.1"
                     /translation="MTTLKLDTLSDRIKAHKNALVHIVKPPVCTERAQHYTEMYQQHL
                     DKPIPVRRALALAHHLANRTIWIKHDELIIGNQASEVRAAPIFPEYTVSWIEKEIDDL
                     ADRPGAGFAVSEENKRVLHEVCPWWRGQTVQDRCYGMFTDEQKGLLATGIIKAEGNMT
                     SGDAHLAVNFPLLLEKGLDGLREKVAERRSRINLTVLEDLHGEQFLKAIDIVLVAVSE
                     HIERFAALAREMAATETRESRRDELLAIAENCDLIAHQPPQTFWQALQLCYFIQLILQ
                     IESNGHSVSFGRMDQYLYPYYRRDVELNQTLDREHAIELLHSCWLKLLEVNKIRSGSH
                     SKASAGSPLYQNVTIGGQTLVDGQPMDAVNPLSYAILESCGRLRSTQPNLSVRYHAGM
                     SNDFLDACVQVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKW
                     GYRCTGMSFINFARVMLAALEGGRDATSGNVFLPQEKALSAGNFNNFDEVMDAWDTQI
                     RYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSGLQVGI
                     ANLGNSLAAVKKLVFEQGTIGQQQLAAALADDFDGLTHEQLRQRLINGAPKYGNDDDT
                     VDTLLARAYQTYIDELKQYHNPRYGRGPVGGNYYAGTSSISANVPFGAQTMATPDGRK
                     AHTPLAEGASPASGTDHLGPTAVIGSVGKLPTAAILGGVLLNQKLNPATLENESDKQK
                     LMILLRTFFEVHKGWHIQYNIVSRETLLEAKKHPDQYRDLVVRVAGYSAFFTALSPDA
                     QDDIIARTEHML"
     gene            14710..15525
                     /gene="ybiV"
                     /locus_tag="JNZ57_001193"
     CDS             14710..15525
                     /gene="ybiV"
                     /locus_tag="JNZ57_001193"
                     /EC_number="3.1.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-phosphatase YbiV"
                     /protein_id="HAY8827481.1"
                     /translation="MSVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIEFVVAS
                     GNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQL
                     NFVACGLQSAYVSENAPEAFVALMAKHYHRLKAVKDYQEIDDVLFKFSLNLPDEQIPL
                     VIDKLHIAFDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGN
                     DAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTSPFNS"
     gene            15677..16942
                     /locus_tag="JNZ57_001194"
     CDS             15677..16942
                     /locus_tag="JNZ57_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1479 domain-containing protein"
                     /protein_id="HAY8827482.1"
                     /translation="MASTFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIA
                     TRVAEINALKAQGDAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGHFPREQALGW
                     DQSMLDYLDRNRFDEVYKGPGDNFFGTLSASRPEIYPIYWSQTQMQARQSEEMANAQS
                     FLNRLWTFESDGKQWFNPDMSVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQ
                     RVFANVFNGNLAQYDPWHAAHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLL
                     HVVPIPEAMAYVLLRTLLDDVPEDELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEAG
                     DSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCKKNLAYAHKVKAALEKGASPGDFP
                     REDYETNWEGRFTLADLNIHGKRALGMDV"
     gene            complement(17183..18775)
                     /locus_tag="JNZ57_001195"
     CDS             complement(17183..18775)
                     /locus_tag="JNZ57_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HAY8827483.1"
                     /translation="MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFM
                     KILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRI
                     YALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGW
                     KLRVLLAQALFADPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMV
                     CTHMADLDYGELRVYPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSANA
                     SKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNALEVEGLTKGFDNGPL
                     FKNLNLLLEVGEKLAVLGTNGVGKSTLMKTLVGDLQPDSGTVKWSENARIGYYAQDHE
                     YEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFG
                     KLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEI
                     TPERVIDFSGNYEDYLRSKGIE"
     gene            18994..19914
                     /gene="ldtB"
                     /locus_tag="JNZ57_001196"
     CDS             18994..19914
                     /gene="ldtB"
                     /locus_tag="JNZ57_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HAY8827484.1"
                     /translation="MNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVIT
                     IPEGNTQPLEYFAAEYQMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIV
                     INSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE
                     YRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDI
                     KFLFEKVPVGTRVQFIDEPVKATTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKS
                     VQTVTGQPDVDQVVLDEAIKNRSGMPVRLN"
     gene            complement(19973..21091)
                     /locus_tag="JNZ57_001197"
     CDS             complement(19973..21091)
                     /locus_tag="JNZ57_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion transporter"
                     /protein_id="HAY8827485.1"
                     /translation="MSLPFLRTLQGDRFFQLLILVGIGLSFFVPFAPKSWPAAIDWHT
                     IITLSGLMLLTKGVELSGYFDVLGRKMVRRFATERRLAMFMVLAAALLSTFLTNDVAL
                     FIVVPLTITLKRLCEIPVNRLIIFEALAVNAGSLLTPIGNPQNILIWGRSGLSFAGFI
                     AQMAPLAGAMMLTLLLLCWCCFPGKVLQYHTGVQTPEWKPRLVWSCLGLYIVFLTALE
                     FKQELWGLVIVAAGFALLARRVVLSVDWTLLLVFMAMFIDVHLLTQLPALQGVLGNVS
                     HLSEPGLWLTAIGLSQVISNVPSTILLLNYVPPSLLLAWAVNVGGFGLLPGSLASLIA
                     LRMANDRRIWWRFHLYSIPMLLWAALVGYVLLVILPAN"
     gene            complement(21088..21555)
                     /locus_tag="JNZ57_001198"
     CDS             complement(21088..21555)
                     /locus_tag="JNZ57_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator MntR"
                     /protein_id="HAY8827486.1"
                     /translation="MSRRAGTPTAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVEL
                     ISDLIREVGEARQVDMAARLGVSQPTVAKMLKRLATMGLIEMIPWRGVFLTAEGEKLA
                     QESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDAFRLFTQKHGAK"
     gene            21741..21869
                     /gene="mntS"
                     /locus_tag="JNZ57_001199"
     CDS             21741..21869
                     /gene="mntS"
                     /locus_tag="JNZ57_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganase accumulation protein MntS"
                     /protein_id="HAY8827487.1"
                     /translation="MNEFKRCMRVFSHSPFKVRLILLSMLCDMVNNKPQQDKPSDK"
     gene            22141..23724
                     /locus_tag="JNZ57_001200"
     CDS             22141..23724
                     /locus_tag="JNZ57_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HAY8827488.1"
                     /translation="MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTA
                     AFTAILLLLWRTLPRVQKVLVGVSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEEST
                     EILTIFPWYSYLVGLFIFALGVIAIRRKKENEKARWNTFDSLCLVFSVATFFVAPVQN
                     LAWGGVFKLKDTGYPVFRFAKDVIVNNNEVIEEQERMAKLSGMKDTWTVTAVKPKYQT
                     YVVVIGESARRDALGAFGGHWDNTPFASSVNGLIFADYIAASGSTQKSLGLTLNRVVD
                     GKPQFQDNFVTLANRAGFQTWWFSNQGQIGEYDTAIASIAKRADEVYFLKEGNFEADK
                     NTKDEALLDMTAQVLAQEHSQPQLIVLHLMGSHPQACDRTQGKYETFVQSKETSCYLY
                     TMTQTDDLLRKLYDQLRNSGSSFSLVYFSDHGLAFKERGKDVQYLAHDDKYQQNFQVP
                     FMVISSDDKAHRVIKARRSANDFLGFFSQWTGIKAKEINIKYPFISEKKAGPIYITNF
                     QLQKVDYNHLGTDIFDPKP"
     gene            complement(23773..24288)
                     /gene="ompX"
                     /locus_tag="JNZ57_001201"
     CDS             complement(23773..24288)
                     /gene="ompX"
                     /locus_tag="JNZ57_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein OmpX"
                     /protein_id="HAY8827489.1"
                     /translation="MKKIACLSALAAVLAFTAGTSVAATSTVTGGYAQSDAQGQMNKM
                     GGFNLKYRYEEDNSPLGVIGSFTYTEKSRTASSGDYNKNQYYGITAGPAYRINDWASI
                     YGVVGVGYGKFQTTEYPTYKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDV
                     GTWIAGVGYRF"
     gene            complement(24341..24406)
                     /locus_tag="JNZ57_001202"
     CDS             complement(24341..24406)
                     /locus_tag="JNZ57_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827490.1"
                     /translation="METFCYMKWPVRHHKSRRVSH"
     gene            24641..25528
                     /gene="rhtA"
                     /locus_tag="JNZ57_001203"
     CDS             24641..25528
                     /gene="rhtA"
                     /locus_tag="JNZ57_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/homoserine exporter RhtA"
                     /protein_id="HAY8827491.1"
                     /translation="MPGSLRKMPVWLPIVILLVAMASIQGGASLAKSLFPLVGAPGVT
                     ALRLALGTLILIAFFKPWRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVA
                     LEFTGPLAVALFSSRRPVDFVWVVLAVLGLWFLLPLGQDVSHVDLTGCALALGAGACW
                     AIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSVIPLGLAVAILS
                     TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTPIQLLALGAIIAAS
                     MGSTLTVRKESKIKELDIN"
     gene            25827..26330
                     /gene="dps"
                     /locus_tag="JNZ57_001204"
                     /gene_synonym="pexB"
     CDS             25827..26330
                     /gene="dps"
                     /locus_tag="JNZ57_001204"
                     /gene_synonym="pexB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001730644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein Dps"
                     /protein_id="HAY8827492.1"
                     /translation="MSTAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLS
                     LITKQAHWNMRGANFIAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKT
                     PLKSYPLDIHNVQDHLKELADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLW
                     FIESNIE"
     gene            26734..27480
                     /gene="glnH"
                     /locus_tag="JNZ57_001205"
     CDS             26734..27480
                     /gene="glnH"
                     /locus_tag="JNZ57_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter substrate-binding
                     protein GlnH"
                     /protein_id="HAY8827493.1"
                     /translation="MKSVLKVSLAALTLVFAVSSHAADKKLVVATDTAFVPFEFKQGD
                     KYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKAID
                     FSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPN
                     IDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKGCDEL
                     RDKVNGALKTLRENGTYNEIYKKWFGTEPK"
     gene            27619..28278
                     /gene="glnP"
                     /locus_tag="JNZ57_001206"
     CDS             27619..28278
                     /gene="glnP"
                     /locus_tag="JNZ57_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015367581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter permease GlnP"
                     /protein_id="HAY8827494.1"
                     /translation="MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFAR
                     TFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSG
                     AYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYIILPLALRRMLPPLGNQWIISIK
                     DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI
                     L"
     gene            28275..28997
                     /gene="glnQ"
                     /locus_tag="JNZ57_001207"
     CDS             28275..28997
                     /gene="glnQ"
                     /locus_tag="JNZ57_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017491583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter ATP-binding protein
                     GlnQ"
                     /protein_id="HAY8827495.1"
                     /translation="MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLL
                     RCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGP
                     LRVRGANKEEAEKLARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLF
                     DEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDG
                     NPQVLIKNPPSQRLQEFLQHVS"
BASE COUNT         7262 a         7771 c         7169 g         6998 t
ORIGIN      
        1 tcagcaatgg taatgaactt cagcggtgaa atgatccccc tctccgcaga aacccaacgg
       61 cacaacgcct ccgcgcccag aatggcgcgg gtgttaatat caacgatcgg ttgatagacg
      121 aggaatagtt cgccaatttc cattgcatgg cgaatattac gcgcaatcca gatattctct
      181 tctatttcgt tgagtttcgc gtcatcacag aaaataaact cggagaacat atggtcacgg
      241 atactggaaa tcgccagttt cagtttttct gcgtaactcc aggcgttttc cccctgcaaa
      301 ggttcacaaa tggcagactt atggatgcgc agattgcggt agccaaagct gctgtcaaaa
      361 tcgtttacca tcgctatttt acgggtaaat gtctgtacat tttcccgaca cagaagtaaa
      421 tagagatcgg cattgaatgt cacgatatcg cagcattgcg catatttctc ggcaattcgc
      481 tgacacaatt tcctgacgat tttattgcgt tcatcaacac caaacaccgc ttccacggct
      541 tccacggctt ccagaccaca cagtttgatg atccccacag ccagatactg attattgttg
      601 gactcaataa tcgccatatt tttaataaaa ccgctttcct gatcgtaaga gatcagtgag
      661 agcaatttat ttgaccgttc aatttcggca tctttcattt ccgcgatcga atttttgatg
      721 ctgataatct ctttcgcatc gccttagcga attttcagag cctcgatctg atccgttgag
      781 tcgggcaaaa atgccagcgt attaaccagc tcggtcattt cagaaaattg ccgacggaac
      841 acacgagtgg tcatgaaata taccaccagc aacacgataa taatgaacgc aaacggtaga
      901 taaaaaagtt tatctgatgc gttcaataaa ttaccgccag gataataaaa atagatttcg
      961 aacaatgcat tatttggcac tgctgatgtc tttgcaatat actccgtatc gacagaatca
     1021 ataatatgat aattaccttc gctattataa ataatcagtt tttcacgagc gagttgattc
     1081 ttggcaatga tctcatgacc ttgtttcaaa aatagaactt catcattagc gctgatttga
     1141 tcaagatact cgttcaaata ccgccagttt aaatcgacat gaattttatc taccgctaac
     1201 aaatcgtgat ctttgccgtt gatacgtagc gtaaaagaga tacatttttt acccggacga
     1261 tcaaagcaat tgtatgccgg attccagctg ttgttagagt catctgaagc caccgaccac
     1321 ggtcgtttcg atgggttaaa atcggcaaaa ataacccgcc ctgactcgtc gacaagcggt
     1381 ccatttactt gttcctgatg ataaacaacg attttatcat tcgccctccg tgaaaagaga
     1441 taatatttat tatcatcaag taccagtccc accgagtcta aaaatggcat catttccatt
     1501 ttcagaatca cggcgcgttg aatctcctct gtatttataa atacagtgag tcctttaatg
     1561 tcagggccga acgttcaata tctttaaaga aatagccaac gtttttctga ataagttcaa
     1621 agcggctatc ggcacgtttt accgcgcgtt ccgataccag ttgatagtta atgatgaaaa
     1681 aaagaccaat aaatgacagt gctgccaata aaaataaaat tatcagcctt atctttatct
     1741 tttcgtataa actcagcatg ttaatacatt taacaaaata actatctgaa cgctgtgccg
     1801 ctgcaaaaat agtcccttgc tgcggctttt taaccaaatt acccgattct acaaaatcag
     1861 cagaaagtta caacacttgc ttagggcaat aatttcctgt gaggtgatta ccctttcaag
     1921 caatattcaa acgtaactat cctttaattt tcggatccag cgcatcgcgt aaaccatcgc
     1981 ccaacaaatt gaacgccagt acggtcagaa aaatagccag ggccggaaaa acagcgacat
     2041 gcggcgcgat aaccatatcc gctcgtgcct cattgagcat tgctccccac tctggtgtcg
     2101 gcggctgcgc accgaggccg agaaatgaca ggctggcggc agagataatc gaggtgccaa
     2161 tgcgcatggt gaaaaacacc acgatagacg agacggtccc aggcaagata tgacgcaata
     2221 aaatggtcat atcgctggca ccaatactgc gtgctgactc aataaaggtt tgctgtttca
     2281 acaccagcgt gttgccgcgc accagtcggg caaacgcggg gatggaaaaa atggcgactg
     2341 cgataatcac gttagcaatg ccgcttccca acaccgcaac aacagcgatc gccagtaaaa
     2401 tacccgggaa ggcaaacagc acatcgcaaa tgcgcatgat cagccgatcc caccagcctt
     2461 cataatatcc agccaacaag cccagcaacg tcccgatcgc cgcaccgata aacacggcaa
     2521 acacgcccgc cgccagcgag atttgcgcac caaccaggac acggctgaaa atgtcgcgcc
     2581 ccagtgaatc gacgccaaac cagtgctgca aagaaggtcc gttattcaga ttgtcataat
     2641 caaaataatt ttcggcgtca tagggagcga tccagcgtgc aaaaatggcc accacaatca
     2701 ataaaataac gaataatgcg gcggtcatcg ccatatgctg acggcgaaat cgtcgccaga
     2761 attcatgcca cggtgtacgc acctggtcag gtttgaccag tggcatggcg tttaacaccg
     2821 cctgacgtcg ccagttaaat agtcgcatcc ttacttgtac ctgatagccg ggttaatggc
     2881 ggcgtaaagc acatccacca ctaagttgat aagaataaat tccagcgaga aaagcagaat
     2941 ttccgcctga atcaccgggt aatcgcgcat ttctacggag tcaacgagta agcgtccaag
     3001 tccgggccag ttgaaaactt tctccaccac gatagaacca ccgagcaaaa agccaaactg
     3061 taagcccatc atggtcacta ccgggatcat cgcgttacgt agcccgtgtt tgaggacaac
     3121 ccaggtttcg ctcacccctt tcgccctcgc ggtacgcata taatcttcgc ttaaaacatc
     3181 gacaaacgac gcgcgggtaa agcgcgccat cacggctgcc actgccgcgc cgagcgtcag
     3241 ggaggataaa atgtagtgct gccaactgtc tgctcccacg gtaggcagcc agcccagttc
     3301 aacggagaat acctgaatta aaagcatccc cagcgcaaat gccggaaacg agatccccga
     3361 caccgcaatg gtcatactca atcgatccgg ccaacgatta cgccagacgg cggcgataat
     3421 tcccgccgcc ataccaaata tcaccgccca gaccatactg gttatggtca gccacagcgt
     3481 tggcataaag cggctggcaa tctcatcggc aaccggacga cgcgacacca tcgacaggcc
     3541 aaaatccccc tgcacagcat tgctgatata gtgccagaac tggtgataca gcggctgatc
     3601 caaccccagc tgctgacgca ccagttctat aacctgcgca tcagcttcgg gcccggcaat
     3661 caatcgcgcc ggatcgccgg gcagcatatg cacaaataaa aacaccagca ccgagacgat
     3721 aaacagcgtc ggaatcaacc ccagtaagcg tttgataacg taattaagca ttccactccc
     3781 tgcgttgctt attgcaaatc cgcgtcttca aagctgaagc cggtgtctgg catgatccaa
     3841 aaaccggtca ggtttttact gtgtgccgac accagttttt ctaccaccag cgggatccac
     3901 ggcgactctt gccagatgat atcctgcgcc gccttataca agcgggtctt ttccgccgga
     3961 tcattagttt tcagtgcctg agccaggaag tcgtccacct gtttattgct gtaaaatgcg
     4021 gtattaaaca gcgtcggtgg ccagttttgc gaggcgaaca gtggcgatag cgcccagtcc
     4081 gcttcgccgg ttgaagccga ccagccagtg tagaacatcc gcacgccgct ctctttttgc
     4141 cctttacctt caacttctgc cgcccgctgt ccggcatcca tcgcggtcac ctgggcttta
     4201 atcccgacct gcgctaactg ctgctgggta aattgcagca ctttctgcgc ggtgctgtgg
     4261 ttatgtgacg accacagcgt ggtactgaaa ccgttgggat atcccgcctc tttcagtaat
     4321 tcgcgcgctt tcactggatc gtaaggccac ggtttataac tttgcgcgta ggcgatactt
     4381 ggcggtacca caccagtagc tggcgttgca tagcccgcaa aggcaacttt caccagcgcc
     4441 ggacggttaa tggcgtaatt cagcgcctca cggaccttcg ggttatcgaa cggcttttgc
     4501 gtcacgttca tactgatata acgctgcata attgacggac tggccatcaa ctcgatattt
     4561 ttgtttttct ccagcagtgc ggcctgctcg tagggaatgg ggaaagcaaa ctgcgcttca
     4621 ccggtttgca gcattgccgc gcgggtgttg ttatccgcca ccggacgcca ggttatgctg
     4681 tccagtttgg gcaatcctgg ctgccagtaa cccgcgaatt ttttcacctt cacaaaatcg
     4741 gtctgattcc aggtatccag ttcatacggt ccggttccca ccggatgaaa accaatctcc
     4801 ttgccatatt tttccagcgc tgccggtgaa atcatcgcgg tcgccggatg ggcaagaata
     4861 ttaataaacg ctgagaacgg ctgtttgagg gtaatcttta ccgttgtcgg atcgatcgcc
     4921 tccgttttgg caatattctt atacaggtta tagcgtttaa gatgattcgc cggatcgctg
     4981 gcccggtcca gattcgcttt caccgccgcg gcgttgaaat cggtgccatc ctggaattta
     5041 attccttccc gcaatttcac ggtgtaagta atgccgtcat cggaaacggt ataactctcc
     5101 gccagcacgt ttttcagttt catctcttta tccagaccga acagcccctg gtaaaacgat
     5161 ttcgctacgg cctgagataa cgtgtcattc gcgtcatacg gatcgagcgt ggtgaaattc
     5221 gatcctaccg ccaccaccac atctttggca gcgaatgcac aagatgccat caacgctgtc
     5281 gcaatgccca gcgccactaa cccactacgg tgtacagctc ttgccatttt attctccgcc
     5341 tgaatgttat ctacgcatga atgcgtattc tgattgtggt tgtgcgacgt aatgccccgg
     5401 cccgacgcat tgcaacgaga cggctgccac ctcttcgcca cgcagatgaa tattgctggg
     5461 aagatcgtcc gacagcagta cacgctgcgg tcgttgtcgg gacggttcag cgaccggaac
     5521 tgccgccagt aatttacgcg tataaggatg ctgcgggttt tcgaagaccg cgcgccgtgg
     5581 accaatttca acaatttgcc cgagatacat caccgccaca cgatgactaa tccgctctac
     5641 cacggccata tcgtgggaga taaacagata cgcaatgccg aaatcacgct ggagatcgag
     5701 caacaagttg ataatctgcc cgcgaataga aacatccagc gccgaaacgg cttcgtcggc
     5761 aatgatcact tttggattca atgccaacgc gcgagcaatg cagatgcgct ggcgctgacc
     5821 gccggaaaac tcatgcgggt aacgccaggc atgttcaggt aacaggccca cgcgctccag
     5881 caaccacgca acgcgtgcag ccgcgtcttt acctggcaat aaaccgtgta cacgcagcgg
     5941 ttcgataatc gaatcaccga tggtctgacg tgggtccagc gaagcgtaag ggtcctgaaa
     6001 aataaactga atatcccggc gcaatgcctg aagtttgcca ggtgacaagg tatcgattcg
     6061 ctgaccgtta aagataattt cgccgccctg cgattcgacc aggcgcagca acgcccgccc
     6121 ggtagtggat ttaccgctgc cagactcgcc caccagcgat agcgtttcgc caggccagag
     6181 atcaaaactg actttctcaa cggcatgcac ttcccgcgtt acgcgattca acaaaccgct
     6241 gcgcaaaggg aaacgggtga caagattacg cactcgtaaa acaggttcgc catccaccac
     6301 cgttttctgc tcgatggggg ggtcctgttt cgctggatgt tcaagcgata tcaatgggaa
     6361 acgtcgggga taatctaacc ctttcatcgc accaagttgc ggaacagcag ctaacagcgc
     6421 acgggtgtaa ggatgttgcg gtgcatgaaa aatctgttcg acggtacccg tttccaccgc
     6481 ctcgccctga tacatcacca gtacccgatc ggctatctct gccaccacgc ccatatcgtg
     6541 cgtgataaag ataacgccca tcgacatctc tttttgcaat actttgatta attgcaggat
     6601 ctgcgcctga atagtgacat ccagcgcggt ggttggctca tcggcaatca gcaccgccgg
     6661 gcggcatgac agcgccatcg caatcatcac tcgctggcgc atcccgccag agagttgatg
     6721 cggataacgt gaaagaatgg tttgtgcctc aggaatgcgt acctgatcca gcatccgctt
     6781 cgcctcgacc atcgcttctt cacgactggc gttctgatgc agacgaattg attcagcaat
     6841 ctgttcaccc acagtaaata ccgggttcag cgatgtcatc ggctcctgaa atatcatcgc
     6901 catatccgca ccgcgaacat ggcgcatttg tgcagcgctc tgctcgctaa gttcaatcac
     6961 ttcgcgactg cgccgctgca acagcatttt atcgcactgt actaaaccgc ccgcctgttc
     7021 caacaggcgc atcaatgcca acgcagtcac tgacttaccg gagccggatt cgccaacaat
     7081 tgccagcgtc tcaccgcgtt gcagactaaa agagagattg cggaccgcag ctattttctg
     7141 ctggtcctgc ataaaggcaa tattcagatt ttcaaccgcc agcacattac cggcatcaag
     7201 ttcatcactg tgtggcaacg gtgtcccctt tttcacggta gataccggtg gttggcgtat
     7261 cgcctgcgta gccccaggcg cgatacattc cttcggtgtt aaacggtagc gcgacattcc
     7321 cttcatggcc gatagcgatt aagccaccgc taccgccaag cgcagggagt ttttccatta
     7381 ctacccgctc gcaggcttcc gcgagactta atccgccgta atccattaac gcggcgatgt
     7441 catatgccgc cagcgcgcgg atgaagactt cgcccgtgcc ggtacaagaa accgccacac
     7501 tggcgttatt ggcgtagcat ccggcaccca ctaagggact atcgccaact cgtccgggta
     7561 atttattggt cattccgcct gtggacgtgg ctgccgccaa attgccgtct aaatccaacg
     7621 ccacggcccc cacggtgccc attttctgtt tttcatccag tggcgcaccg ctatggtcga
     7681 ggacggttgc cccttccttg cgcgctgcca gtagttgttc ataacgcaaa ggcgtggaga
     7741 aaatctccgg cgagacgcgc tccatgccac gagcaaacgc aaaattttct gccccttcgc
     7801 caatcatcat cacatgcggg ctttgctcca tcaccagccg ggcggcaaga accggattac
     7861 gcagatgact aacgcccgcc accgcaccgg ttttcagggt gttaccatcc atcatacagg
     7921 cgtccagttc atgggtttca tcacgcgtaa agacagcgcc aattccggcg ttaaacagtg
     7981 gacactcttc cagcagacgc accgcttccg tcaccacatc cagcgcactt tcgcccgctt
     8041 ccagcatttt ctgcccggtt tcaacaatgg cagacaacgc ctcaatgtag cgtaattcct
     8101 gttgcagact catctgcgcg cggctaattg cacctgcgcc accatgaatt gcaatgactg
     8161 ctttgcccat agtattcgtc cattaagggt ggctcgccac ttttgctata aatatcagaa
     8221 tttttatgaa ttactcattc aatttttgaa tatagaaaga tggatatggc atgtaaaggc
     8281 aggagccaac gctacgcccg aggtggcata cagtctgtgg cgtttttctg acataatagg
     8341 caaattcgat tttgcctccg caggagtgtt ttcatggaat ttaccaccgg attgatgtcg
     8401 ctcgacaccg cgcttaatga gatgctttct cgcgtcaccc cactgaccgc ccaggaaacg
     8461 ctgccactgg tacagtgttt tggtcgtatt ctggcgagcg atgtcgtttc gccgcttgat
     8521 gttccggggt ttgataactc cgcaatggac ggctacgcgg tgcgtttagc cgatattgcc
     8581 tccgggcaac cgctgcccgt tgccggtaaa tcctttgccg gtcagccgta tcatggtgaa
     8641 tggcctgcgg gcacctgcat tcgtattatg accggtgcgc cggtgccgga aggctgcgaa
     8701 gcggtggtga tgcaggagca gactgaacaa acggacaatg gcgtgcgttt tactgctgaa
     8761 gtgcgtagcg ggcaaaatat tcgccgtcgc ggtgaagata tctctgcagg tgcggttgtt
     8821 ttcccggcgg gaactcgcct gactaccgca gagctgccag taattgcttc actggggatt
     8881 gccgaagttc cggtgattcg taaagtgcgt gtagcgcttt tttctaccgg tgatgaactc
     8941 cagttgcccg gtcagccgct gggcgacggc caaatctacg acaccaaccg tctcgccgta
     9001 cacctgatgt tagaacagct gggttgcgag gtaatcaact tagggattat ccgcgacgat
     9061 ccccatgccc tgcgcgccgc atttattgaa gccgacagcc aggcggatgt agtgatcagt
     9121 tccggcggtg tttcagtggg tgaagcggat tacaccaaaa cgattcttga agagctgggg
     9181 gagatcgcct tctggaagct ggcgattaaa ccaggtaaac cgttcgcgtt cggtaaactc
     9241 agcaatagct ggttctgcgg cctgccgggc aacccggttt cagcgacgct gaccttctat
     9301 caactggtac agcctttgct ggcaaaacta agcggcaaca ccgccagcgg cctgcccgcg
     9361 cgccagcgcg tacgcacagc gtcccgcctg aaaaaaacgc caggacgtct tgatttccag
     9421 cgcggcgtgc tgcaacgcaa cgccgacggt gaacttgaag tgacgaccac cggacatcag
     9481 ggttcacata tatttagctc ctttagtctc ggcaactgct ttatcgtgct ggaacgcgat
     9541 cgcggcaatg tggacgtggg cgaatgggtg gaagtagaac cgtttaacgc gttgttcgga
     9601 ggcctgtaat ggcggaactc agcgatcagg agatgctgcg ctacaaccgg caaatcattc
     9661 tgcgcggttt tgattttgac ggtcaggagg cgctaaaaga ttctcgtgtg ctgatcgtcg
     9721 gcctcggtgg actcggctgc gcagcttcgc agtatctggc aagcgccggt gtcggcaacc
     9781 tgacgctgct cgacttcgac acggtttcgc tctcgaatct gcaacgccag acactgcaca
     9841 gtgatgccac ggtcgggcaa ccgaaggtgg aatccgcccg tgacgccctg acgcggatca
     9901 acccacatat cgcgattacg ccagtcaatg cactgctaga tgacgcagaa cttgcagcat
     9961 tgattgctga acacgatctg gtgctcgact gtacggataa cgttgcggta cgtaatcaac
    10021 tgaacgcagg ctgttttgcc gcgaaggtgc cgctggtttc cggcgcggca attcgtatgg
    10081 aagggcaaat cacggtcttc acttatcagg acggcgaacc gtgctatcgc tgccttagcc
    10141 gtttgtttgg cgagaacgcg ttaacctgcg tagaagcagg cgtgatggca ccgttgatcg
    10201 gagtaattgg ttcgttgcag gcaatggaag cgatcaaact gctggcaggt tatggcaaac
    10261 cggccagcgg gaaaatcgtc atgtacgatg cgatgacctg tcagtttcgc gaaatgaaac
    10321 tgatgcgtaa tccggggtgt gaggtgtgcg ggcagtaatt gccacctcca agccagataa
    10381 gacgcggcac tccgccacgt catcagcaat ttatgaggat gcagaacgtc cggttaaatc
    10441 gacgttctgc caaacgctcc cagccagtcc tgttcaaact tcgccacagc ggcatcaacc
    10501 gccggatagc taatcatctg ttgtgccaca tccagtggca gcgtaattga ttcacatcct
    10561 gccagtaagc agtccagcgc ctgacgcggg tttttgaaac tcgctgccag cactttcgcc
    10621 tgcggcgcat gcattttcaa taactggtgt aagtcggtca cagtctgaat gccgctaccg
    10681 ccctgagcat caatacgatt aacgtaaggc gcaacatatt ccgcacctgc cagcgccgac
    10741 agcagccctt gtgctgcgcc atataccgcg gttcccagcg ttggaatccc ttccgctttt
    10801 aacatcttaa tagctgccag cccctcggcg gtcaccggaa ctttcaccac gatatccgca
    10861 ataatagaac gcaatttacg tgcgtcattc accatccctt cagcagtggt agccattacc
    10921 tgggcaaaca gacgcccctg accgcccatc gcttcatgaa gttgcggaag cacaacatcc
    10981 agcggttttt tacccgcggc gataatgctt gggttagtgg tcacacccgc cagcggaaaa
    11041 atacgtgaca gcgccttcac cgcaacaacg tctgaagtat ccagatacag ttccataacc
    11101 atcctcaaaa tgtacttttt gtctgaatgt agactatcac gggaaaactc tctgaacagt
    11161 tgacgcacat caacccaact ttcattcgaa agtattttaa tgtttgaacg aaacagagag
    11221 gcaactatga ttttcaatat tcagcgctac tcgacccatg atggccccgg tatccgcacg
    11281 gtcgtatttc taaaaggctg ttcgctgggc tgccgctggt gtcagaaccc ggaaagccgc
    11341 gcccgcacgc aggatctgct gtatgacgca cgactgtgtc tggaaggctg cgagctgtgc
    11401 gctaaggcag cgccggaagt gattgagcgc gcattgaatg gtttgcttat tcatcgggaa
    11461 aagttaaccc cggagcatct gacggcgcta accgactgct gcccgacaca ggcgttaacc
    11521 gtgtgtgggg aagtgaaaag cgttgaggag atcatggcga ccgttctgcg cgataaaccg
    11581 ttttacgatc gcagcggcgg cggcttaacg ctttcgggtg gtgaaccctt tatgcagccg
    11641 gaaatagcga cggcgctact gcaagcctgc cacgaggcag gcattcatac tgcggtagaa
    11701 acctgtctgc atgtgccgtg gaaatatatc gccccttctc tgccctatat cgatctgttt
    11761 cttgccgatt taaaacacat tgccgacgcg ccgtttaaac agtggaccga cggtaacgcc
    11821 gccaaggtgc tggataacct gaaaaaactc gccgcagcgg gcaaaaaaat cattatccgc
    11881 gtgccgctga ttcagggctt taatgccgac gaaacctctg taaaagccat taccgatttt
    11941 gccgccgacg agctgcacgt tggcgaaatt cattttctgc cctaccacac gctgggcatc
    12001 aacaaatatc acttacttaa tctgccctat gacgccccgg aaaaaccgct tgatgcgcca
    12061 gacctgctcg actttgccca gcagtatgcc tgccagaaag ggttaaccgc gaccttacga
    12121 ggataacaac catgaccaca ctgaaactgg acacgctcag cgaccgcatt aaagcgcaca
    12181 aaaatgcgct ggtgcatatt gtgaaaccgc cggtctgtac cgagcgcgcg cagcactata
    12241 ccgagatgta tcaacaacat ctcgataagc cgatcccggt acgtcgcgcg ctggctctgg
    12301 cgcatcacct ggcgaatcgc accatctgga tcaagcacga tgagttgatc atcggcaacc
    12361 aggcaagcga ggttcgcgct gcgccgatct tcccggaata taccgtctcg tggatcgaaa
    12421 aagagattga tgatctggca gatcgtcccg gtgctggttt tgcggtgagc gaagagaaca
    12481 aacgcgttct gcatgaagtg tgcccgtggt ggcgcggtca gacggtacag gatcgctgct
    12541 acggcatgtt taccgatgag caaaaaggtc tgctggcgac cggaatcatt aaagcggaag
    12601 gcaatatgac ctccggcgat gcgcacctgg cggtgaattt cccgctgctg ctggaaaaag
    12661 gtcttgatgg tctgcgcgag aaagtagcgg aacgtcgctc gcgcatcaat ctgacggtac
    12721 tggaagattt gcacggcgaa cagttcctga aagcgattga tatcgtgctg gtggcagtca
    12781 gcgaacacat tgaacgtttt gcagccctgg cgcgtgaaat ggccgcgacc gaaacccgcg
    12841 aaagccgtcg cgatgaactg ctggcgatag cagaaaactg cgatcttatc gcccaccagc
    12901 cgccgcagac tttctggcag gcgctgcaac tgtgttactt catccagttg atattgcaga
    12961 tcgaatctaa cggtcactcg gtatcgtttg gtcgtatgga ccagtatctc tacccgtact
    13021 atcgccgcga cgttgaactc aaccagacac tggatcgcga acacgccatc gaattgctgc
    13081 atagctgctg gctgaaactg ctggaagtga acaagatccg ctccggctca cactcaaaag
    13141 cctctgcggg aagtcctctg tatcagaacg tcaccattgg cggacaaact ctggttgatg
    13201 gtcaaccaat ggacgcggtg aatccactct cttacgcgat cctcgaatcc tgcggtcgcc
    13261 tgcgttccac tcagcctaac ctcagcgtgc gttaccatgc aggaatgagt aatgatttcc
    13321 tcgacgcctg cgtacaggtg atccgttgcg gcttcgggat gccggcgttc aacaacgacg
    13381 aaatcgtgat cccggaattt attaaactcg gtattgaacc gcaggacgct tacgactacg
    13441 cagcgattgg ttgtatcgaa accgccgttg gtggcaaatg gggctatcgc tgtaccggca
    13501 tgagctttat caacttcgcc cgcgtgatgc tggcggcgct ggaaggcggg cgtgatgcca
    13561 ccagcggcaa cgtgttcctg ccacaagaaa aagcgttgtc ggcaggcaac tttaacaatt
    13621 tcgatgaagt aatggacgcg tgggatacgc aaatccgtta ttacacgcgt aaatcaatcg
    13681 aaatcgaata tgtcgtcgac accatgctgg aagagaacgt gcacgatatt ctctgctcgg
    13741 cgctggtgga tgactgtatt gagcgagcga aaagtatcaa gcaaggcggc gcgaaatatg
    13801 actgggtttc tggcctgcag gttggcattg ccaacctcgg caacagcctg gcggcagtga
    13861 agaaactggt atttgaacag ggcacgattg gtcagcaaca gctggctgcc gcactggcgg
    13921 atgacttcga tggcctgact catgagcaac tgcgtcagcg gctgattaac ggtgcgccga
    13981 agtacggcaa cgacgatgat actgtcgata cgctgctggc tcgcgcttat cagacctata
    14041 tcgacgaact gaaacagtac cataatccgc gctatggtcg tggtccggtt ggcggcaact
    14101 attacgcggg tacgtcatct atctccgcta acgtaccgtt tggtgcgcaa actatggcaa
    14161 cgccggacgg gcgtaaagcc cacaccccgc tggcagaagg cgctagtccg gcctctggta
    14221 ctgaccatct cggccctact gcggtcattg gctcggtggg taaactgcct acggcagcga
    14281 ttctcggcgg cgtgttgctc aaccagaaac tgaatccggc aacgctggag aacgaatctg
    14341 acaagcagaa gctgatgatc ctgctgcgca ccttcttcga ggtgcataaa ggctggcata
    14401 ttcagtacaa catcgtttcc cgcgaaacgc tgctggaggc gaaaaaacat ccggatcagt
    14461 accgcgatct ggtagtgcgt gtcgcgggtt attccgcctt cttcaccgcg ctctctccag
    14521 acgctcagga cgatatcatc gctcgtactg aacatatgct gtaatctctt cggcccggct
    14581 gcggcgtcgc cgggctaaat cattcacatc atcaatttca tccttacttt cattcgaaat
    14641 ataatttgtg ctctgcgtca cattgttatt acactgttac ggtttcattt tcgagccagg
    14701 agcacaccta tgagcgtaaa agttatcgtc acagacatgg acggtacttt tcttaacgac
    14761 gccaaaacgt acaaccaacc acgttttatg gcgcaatatc aggaactgaa aaagcgcggc
    14821 attgagttcg ttgtcgccag cggtaatcag tattaccagc ttatttcgtt ctttcctgag
    14881 ctaaaggatg agatctcttt tgtcgcggaa aacggcgcac tggtttacga acatggcaag
    14941 caactgttcc acggcgaact gacccgacat gaatcgcgga ttgttattgg cgagttgcta
    15001 aaagataagc aactcaattt tgtcgcctgc ggtctgcaaa gtgcatatgt cagcgaaaat
    15061 gcccccgaag catttgtcgc actgatggca aaacactacc atcgcctgaa agctgtaaaa
    15121 gattatcagg agattgacga cgtactgttc aagttttcgc tcaacctgcc agatgaacaa
    15181 atcccgttag tgatcgacaa actgcacata gcgttcgatg gcattatgaa acccgtcacc
    15241 agtggttttg gctttatcga cctgattatt cccggtctac ataaagcaaa cggtatttcg
    15301 cggttactga aacgctggga tctgtcaccg caaaatgtgg tagcgattgg cgacagcggt
    15361 aacgatgcgg agatgctgaa aatggcgcgt tattcctttg cgatgggcaa tgctgcggaa
    15421 aacattaaac aaatcgcccg ttacgctacc gatgataata atcatgaagg cgcgctgaat
    15481 gtgattcagg cggtgctgga taacacatcc ccttttaaca gctgacctct ctaccggagc
    15541 cgtgcgctcc ggttttccct tctttttaca tcctgtacat cacatcaaat cattaaactt
    15601 gcattaactt atttataact tatattgtca catacaaatc ataatggttt cgaatgaaag
    15661 ttagtgagag gtggttatgg cttctacttt taccagcgac acattgccag ccgatcacaa
    15721 agcagctatc cgtcagatga agcacgcgct gcgggcgcag cttggcgacg tccagcagat
    15781 ctttaatcag ctaagcgatg acattgccac gcgagtggct gaaatcaacg cactcaaagc
    15841 acagggcgat gccgtctggc cggtgctgtc ttatgccgat atcaaagcag gtcatgttac
    15901 tgcagagcag cgcgaacaga ttaaacgtcg cggttgtgcg gtgataaaag gccatttccc
    15961 ccgcgaacaa gcgctaggct gggatcagtc gatgctggac tatctggacc gcaaccgctt
    16021 tgacgaggtc tacaaaggcc ccggcgataa tttcttcggg acgctcagcg cttcacgtcc
    16081 cgagatttac cccatctact ggtcgcagac gcaaatgcag gcccgccaga gtgaagaaat
    16141 ggcgaatgcg cagtcgtttc tcaatcgtct gtggacattt gaaagtgatg gaaagcaatg
    16201 gtttaacccg gatatgagcg tcatctaccc tgaccgtatc cgccgccgtc cgcccggaac
    16261 gacctccaaa ggtcttggag cgcataccga ctccggggcg ctggaacgct ggctgcttcc
    16321 agcgtatcag cgcgttttcg ccaacgtctt taatggcaat ctggcgcaat atgatccctg
    16381 gcatgcggca catcgtacgg aagttgaaga gtacacggtg gacaacacca ccaaatgttc
    16441 cgtgtttcgg acattccagg gctggacagc gctctctgat atgctgcctg gtcaggggtt
    16501 gctgcacgtt gtgcccattc ctgaagccat ggcgtacgta ctgttacgta cgctgcttga
    16561 tgatgtgccg gaggatgaac tgtgcggcgt agcgcccgga agagtgttgc cggtatcaga
    16621 gcaatggcat ccactgttaa ttgaggcgtt aaccagcatt ccaaaactcg aggccggaga
    16681 ctccgtctgg tggcactgcg acgtcatcca ttccgttgcc cccgttgaaa atcaacaggg
    16741 ttggggcaac gtgatgtaca ttcctgcggc accgatgtgc aagaaaaatc ttgcctacgc
    16801 gcacaaggtg aaggccgcac tggaaaaagg cgcatcgccg ggcgacttcc cgcgcgagga
    16861 ctatgaaaca aactgggaag gacgctttac gcttgccgac ctcaacattc acggtaagcg
    16921 agcgttgggc atggatgttt gagagttaat ggaagtgaat tgatgtggga ttaagaaaat
    16981 cgattcgacg ttactcagat tgctgacaag tgcgctttct taatgcctga tgcggcgtta
    17041 acgccttatc tggcctacaa agtcctgcag attcaatata ttacaggtac tgcgtaggcc
    17101 tgataagcgt agcgcatcag gctattttgc atttgtcatc agccgccgtc accccgacag
    17161 tatcggggtg acggataatc acttactcga tccctttact acgcaggtaa tcttcgtaat
    17221 taccgctaaa gtcgatcacg cgttccgggg tgatttccag aatgcgggtc gccagggagc
    17281 ttacgaactc acggtcgtgt gaaacaaaga tcagcgtgcc ctgatacagt tccagcgcca
    17341 tgttcagtga ctcgatggat tccatatcca ggtggttggt cggttcgtcc atgatcagaa
    17401 tgttcggctt ctgcatcatt aacttaccaa acagcatccg ccctttttcc ccaccggaaa
    17461 gcactttagc tggctttttg atgtcgtcct ggctgaacag caaacgaccg agaatgctgc
    17521 gtaccgcctg ctcgtcatcg ccttcctgct tccactgact catccattcg aacacggtca
    17581 gatcattttc aaactcatat tcgtggtcct gggcgtagta accaatgcgc gcgttttcag
    17641 accattttac ggtgccgctg tccggttgca gatcgcccac cagcgttttc atcagcgttg
    17701 atttaccgac gccgttggta cccagtaccg caagtttttc accgacctcc agcagcaggt
    17761 tgagattttt aaacagtgga ccgttatcaa accctttggt cagaccttcc acttccagcg
    17821 cgttacggaa cagtttctta tcctgttcaa aacggatgaa cgggttctga cggctggagg
    17881 ctttcacctc ttccagtttg attttatcaa tctggcgcgc gcgcgaagtt gcctggcgag
    17941 atttcgaggc gttggcgcta aagcggctaa cgaaagattg caactcagca atctgcgctt
    18001 tcttcttggc gttatcggcc agcagacgtt cacgcgcctg ggtcgccgcc gtcatgtact
    18061 catcgtagtt acccggataa acgcgcagct cgccgtaatc cagatccgcc atgtgggtac
    18121 agaccatgtt aaggaagtga cggtcgtgcg agatgatgat catggtgctg tcacgctcgt
    18181 tcagcacctg ttccagccag cgaatggtgt cgatgtcgag gttgttggtc ggttcgtcga
    18241 gcaggagaat atccggatca gcaaacagcg cctgcgccag aagcacacgc agcttccagc
    18301 caggagcaac ttcactcatc gggccgtagt gctgttccac tggaattccc acgccaagca
    18361 acaattcacc ggcgcgagct tccgcagagt aaccgtccat ttcgccgtat ttaacttcca
    18421 gatcggccac tttatagccg tcttcctcac tcatttccgg caaagcatag atgcggtcac
    18481 gctcctgctt cacttcccac aactctttat gccccatgat caccgtatcc agcacagtga
    18541 actcttcaaa ggcaaactga tcctgacgca gcttaccaat gcgctcgttg ggatcgaggg
    18601 aaacgttacc caaagtcggc tctaagtcgc cgccgaggat cttcataaag gtggatttac
    18661 cactaccgtt cgcgccaatc aggccgtaac ggttgccgcc gccaaatttg acggaaatgt
    18721 tttcaaacaa cggcttactg ccgaactgca tggtgacgtt actggaaact aacacaggcg
    18781 tatcctgaaa agagatatga caaaccgcgc attatgccat aagtctgaaa gaagatcctg
    18841 ctcctcgctt aaggtctaca ctcaagccaa aggcaaaaaa tgtgatttcg tacacatctg
    18901 atttcactgt gagctggaat gaacttataa tgcgcttcca atactctaat attctcaacc
    18961 caatggcctg ccaggcacaa aatctcgctt aacatgaata tgaaattgaa aacattattc
    19021 gcagcggcct tcgctgttgt cggcttttgc agtaccgcct ctgcggtaac ttatcctctg
    19081 ccaaccgacg ggagtcgcct ggttggtcag aatcaggtga tcaccattcc tgaaggtaac
    19141 actcagccgc tggagtattt tgccgcggag taccagatgg ggctttccaa tatgatggaa
    19201 gcgaacccgg gtgtggatac cttcctgccg aaaggcggta ctgtactgaa cattccgcag
    19261 cagctgatcc tgccggatac cgttcatgaa ggcatcgtca ttaacagtgc agagatgcgt
    19321 ctgtattact atccgaaagg gaccaacacc gttatcgtgc tgccgatcgg cattggtcag
    19381 ttaggcaaag atacgcctat caactggacc accaaagttg agcgtaagaa agcaggcccg
    19441 acctggacgc cgaccgccaa aatgcacgca gagtaccgcg ctgcgggcga accgcttccg
    19501 gctgtcgttc cggcaggtcc ggataacccg atgggtctgt atgcactcta catcggtcgc
    19561 ctgtatgcta tccatggcac caacgccaac ttcggtatcg gcctgcgtgt aagtcatggt
    19621 tgtgtgcgtc tgcgtaacga agacatcaaa ttcctgttcg agaaagtacc ggtcggtacc
    19681 cgcgtacagt ttattgatga gccggtaaaa gcgaccaccg agccagacgg cagccgttat
    19741 attgaagtcc ataacccgct gtctaccacc gaagcccagt ttgaaggtca ggaaattgtg
    19801 ccaattaccc tgacgaagag cgtgcagaca gtgaccggtc agccagatgt tgaccaggtt
    19861 gttcttgatg aagcgattaa aaaccgctcc gggatgccgg ttcgtctgaa ttaatcttca
    19921 aaacttaaag caaaaggcgg actcataatc cgcctttttt atttgccaga ccctagttgg
    19981 ccgggagtat aactaacaaa acatatccca ccaacgccgc ccacaacagc atcggtattg
    20041 aatagagatg gaaacgccac cagatgcggc gatcgttcgc catacgtagc gcaatcaaac
    20101 ttgccagcga tccgggtaat aacccaaagc cacctacgtt taccgcccat gccagtaata
    20161 aagacggcgg cacatagttc agcaacaata tggtactcgg cacgttactg atcacctgcg
    20221 ataaaccgat tgccgttaac cataacccgg gttcagatag atgactcacg ttacccaaca
    20281 cgccttgcaa cgctggaagc tgggtcagta aatggacgtc gataaacatc gccataaaca
    20341 ccagcagcag cgtccagtcc acactgagca ccacgcgacg tgccagcagc gcaaagcctg
    20401 ccgccacaat caccagtccc cacagctctt gtttgaactc cagcgccgtt agaaagacga
    20461 tatacagccc cagacaactc cacaccagcc gcggtttcca ctccggtgtt tgcacccccg
    20521 tatggtattg cagcaccttt ccagggaaac aacaccagca caggagcagg agcgtcagca
    20581 tcattgcgcc agccagcggt gccatttggg caataaatcc ggcaaacgaa agaccagaac
    20641 gtccccagat aagaatattt tgcgggttgc caattggcgt cagtagcgaa ccagcattga
    20701 ctgccagcgc ctcaaaaata atcagccgat taaccgggat ctcacacagt ctttttagcg
    20761 tgatagtcag cggaacaaca ataaacagcg cgacatcgtt ggtcagaaag gtagaaagca
    20821 gcgccgccgc cagcaccata aacatcgcca gccgacgctc cgtagcaaag cggcgcacca
    20881 ttttgcgccc cagcacatca aaataaccgc ttaactccac acctttggtc agcagcatca
    20941 ggccgcttaa ggtgatgatg gtgtgccagt cgatagcagc aggccaggat ttcggtgcaa
    21001 agggcacgaa aaagcttaat ccgataccaa caagaattaa taactgaaaa aaacgatcgc
    21061 cttgcagcgt gcgtaaaaaa ggcaggctca tttggcaccg tgtttctggg taaacaaacg
    21121 aaaagcgtcg agcgtctctt cactaacatg gtgctccatg ccttccgcgt cgcgacgggc
    21181 gatttccgga ctgacgccca acaccaacaa gaaattttcg actatctgat gtcgctcgcg
    21241 gctttcctgc gccagcttct ctccttctgc cgttaaaaac acgccacgcc aggggatcat
    21301 ttcaatcagc cccatggttg ccagccgctt aagcatttta gccaccgtcg gttgcgaaac
    21361 tcccagacga gcagccatgt ccacctgacg agcttccccc acttccctga tcaagtcaga
    21421 aatcagctca acgtaatcat caataagctc gcgccgatgc gcctctctga cctggcggaa
    21481 cccttcaacg tgctcttcca cgttcactaa ctgcgtcact ttttttgctg ttggcgtacc
    21541 tgcgcgacga ctcattgtgc ttcctcatta tggtgacgca tacatagcgt tctcatttcg
    21601 tgcgcacatt gtaaaccaga gttgcgaagg tacaaaaaat taacgtttta gcaatagcta
    21661 tataatatag cctgtgctat atctgtatgt aatgcaatca tccctcaagg atcgacggga
    21721 ttagcaagtc aggaggtctt atgaatgagt tcaagaggtg tatgcgcgtg tttagtcatt
    21781 ctccctttaa agtacggtta atactgctct ctatgttgtg cgatatggtc aacaacaaac
    21841 cgcagcaaga taaaccttcc gataaatagc ggcgtcgcgg tacgccgctt cactcctgct
    21901 ttcatgcagg cataacgcgt tttggtctga aaaaacccac tttttgtcgg atttgcaatc
    21961 cccttcgcaa aagatttgtt cgtcagtagt tgacctgaac ggcggctcgc tctatcttct
    22021 tgcagccctg cgtatattgc ggctcgcgga tgcggacccc tttccactct tcacgcactc
    22081 ttgcaggtat tgacccttga cgccagggta agcacatggc gtttgttacg atagtggcat
    22141 atgaatttaa ccctcaaaga atcgcttgtt acccgtagcc gggtatttag cccgtggact
    22201 gcgttctact ttttacagtc gctattaatt aacctcggct taggttaccc cttcagtttg
    22261 ctctacaccg ctgcgtttac ggctattttg cttttgctat ggcgaacatt gcctcgcgta
    22321 caaaaagttc tggtcggtgt cagttcgctg gtggcggctt gttatttccc ttttgctcag
    22381 gcctacggcg cgcctaattt caatacattg ctggcattgc actccaccaa tatggaagag
    22441 tcgaccgaaa tcctgacgat ttttccgtgg tacagctacc tggtcggctt atttattttt
    22501 gcgctcggcg taatagcaat caggcgaaaa aaagagaatg aaaaagcgcg ctggaatacc
    22561 ttcgacagcc tgtgtctggt attcagtgtg gcgacatttt ttgttgctcc cgtgcaaaac
    22621 ctggcctggg gtggcgtatt taaactgaaa gatactggct atccggtatt tcgttttgct
    22681 aaggatgtca tcgtcaataa taacgaggtg attgaagagc aagaacggat ggcaaaactt
    22741 tccggaatga aagatacctg gacggtcact gccgttaagc cgaagtatca gacctatgtg
    22801 gtggtgatcg gtgaaagcgc gcgtcgcgat gccctcggtg cctttggcgg tcactgggac
    22861 aataccccgt ttgccagcag cgttaacggt ttgatatttg ctgactacat tgccgccagt
    22921 ggctccacgc agaaatcgct tggcttaacg ctcaatcgcg tagtcgatgg caaaccacag
    22981 tttcaggata actttgtcac cctggcaaat cgcgcgggct tccagacctg gtggttttcc
    23041 aaccagggcc aaatcggcga atacgatact gctatcgcca gcatcgccaa acgtgcagat
    23101 gaagtgtact tcctgaaaga aggtaatttt gaagcagata aaaacacgaa agacgaagcg
    23161 ttactggata tgaccgctca agtgctggcg caagagcact cgcaaccgca gctgattgtt
    23221 ctgcatctga tgggctcgca tccgcaggcc tgcgacagga cacaaggcaa atacgaaacc
    23281 tttgtgcaat cgaaagaaac gtcgtgctat ctctatacca tgacgcaaac ggacgattta
    23341 ctgcgcaagc tgtacgatca gttacgcaac agcggcagca gcttctctct ggtttacttt
    23401 tctgaccacg gtctggcctt taaagagcgc ggcaaagacg tgcaatacct tgcccatgat
    23461 gataaatatc agcaaaattt ccaggtgcct tttatggtca tttccagcga cgataaagcg
    23521 catcgggtga ttaaagcccg ccgctcagcc aatgacttct taggcttttt ctcgcagtgg
    23581 acgggaatta aagcgaagga aataaatatc aaatacccgt ttatatctga gaagaaagcc
    23641 gggccgatat acatcaccaa cttccagtta cagaaggtgg attacaacca tctcggaacc
    23701 gatattttcg acccgaaacc ttaaaaacaa aaatccgccc cgagaggcgg attttttata
    23761 tcaccaaagt gattagaagc ggtaaccaac accggcaatc caggtgccta cgtcaacgct
    23821 acgaatacgg ctctgctcgt aagagaagtc cagagcaacg ttttccatcg ggttgaactg
    23881 cagaccagca ccgtaggaga aaccgtagtc gctggtgtcg tgtttgtagg tcgggtattc
    23941 agtggtctgg aatttaccat aacccacacc cactacaccg tagatgcttg cccagtcgtt
    24001 aatgcggtaa gccggaccag cagtgatgcc gtagtactgg tttttgttgt agtcaccaga
    24061 gcttgcagta cgacttttct cggtgtaagt gaaagaaccg atcacaccca gcgggctgtt
    24121 gtcttcttca tagcggtatt tcaggttgaa accgcccatt ttgttcattt ggccctgagc
    24181 gtcgctctgt gcgtaaccgc cagttacggt agaagtcgca gctacggaag tacctgcggt
    24241 gaaagccaga actgcggcca gtgctgaaag acatgcaatt tttttcataa ccacctcaaa
    24301 tgtgattcaa ataagtccta agttttaaat atatcaaaaa ttaatgggaa actcttcgcg
    24361 atttgtgatg tctaacgggc catttcatgt aacagaacgt ttccatacac cgctatccat
    24421 ctaaatttaa atcacttttt cagagaactg cgtaagtatt acgcatgttt tccctgtcat
    24481 tcatccagat tattcctaat caccagacta atgattccat caatcctggc gcattttagt
    24541 caaaacgggg gaaaattttt tcaacaaatg ctcaaccagc attgggtata tccagtacac
    24601 tccacgcttt acttaagtct agatatttgt gggagaaagg atgcctggtt cattacgtaa
    24661 aatgccggtc tggttaccaa tagtcatatt gctcgttgcc atggcgtcta ttcagggtgg
    24721 agcctcgtta gctaagtcac tttttcctct ggtgggcgca ccgggtgtca ctgcgctgcg
    24781 tctggcatta ggaacgctga tcctcatcgc gttctttaag ccatggcgac tgcgctttgc
    24841 caaagagcaa cggttaccgc tgttgtttta cggcgtttcg ctgggtggga tgaattatct
    24901 tttttatctt tctattcaga cagtaccgct gggtattgcg gtggcgctgg agttcaccgg
    24961 accactggcg gtggcgctgt tctcttctcg tcgcccggta gatttcgtct gggttgtgct
    25021 ggcggttctt ggtctgtggt tcctgctacc gctggggcaa gacgtttccc atgtcgattt
    25081 aaccggctgt gcgctggcac tgggggccgg ggcttgttgg gctatttaca ttttaagtgg
    25141 gcaacgcgca ggagcggaac atggccctgc gacggtggca attggttcgt tgattgcagc
    25201 attaattttc gtgccaattg gagcgcttca ggctggtgaa gcactctggc actggtcggt
    25261 tattccattg ggtctggctg tcgctattct ctcgaccgct ctgccttatt cgctggaaat
    25321 gattgccctc acccgtttgc caacacggac atttggtacg ctgatgagca tggaaccggc
    25381 gctggctgcc gtttccggga tgattttcct cggagaaaca ctgacaccca tacagctgct
    25441 ggcgctcggc gctatcatcg ccgcttcaat ggggtctacg ctgacagtac gcaaagagag
    25501 caaaataaaa gaattagaca ttaattaaat ttacatttct gcatggttat gcataaccat
    25561 gcagaattta tcgctacttt tcctctacac cgtctttata tatcgaatta tgcaaaagca
    25621 tatttattcc gaaaattcct ggcgagcaga taaataagaa ttgttcttat caatatatct
    25681 aactcattga atctttatta gttttgtttt tcacgcttgt taccactatt agtgtgatag
    25741 gaacagccag aatagcggaa cacatagccg gtgctatact tagtctcgtt aattactggg
    25801 acataacatc aagaggatat gaaattatga gtaccgctaa attagttaaa tcaaaagcga
    25861 ccaatctgct ttatacccgc aacgatgtct ccgacagcga gaaaaaagca acagtagagt
    25921 tgctgaatcg ccaggttatc cagtttattg atctttcttt gattaccaaa caagcgcact
    25981 ggaacatgcg cggcgctaac ttcattgccg tacatgaaat gctggatggc ttccgcaccg
    26041 cactgatcga tcatctggat accatggcag aacgtgcagt gcagctgggc ggtgtagctc
    26101 tggggaccac tcaagttatc aacagcaaaa ccccgctgaa aagttacccg ctggacatcc
    26161 acaacgttca ggatcacctg aaagaactgg ctgaccgtta cgcaatcgtc gctaatgacg
    26221 tacgcaaagc gattggcgaa gcgaaagatg acgacaccgc agatatcctg accgccgcgt
    26281 ctcgcgacct ggataaattc ctgtggttta tcgagtctaa catcgaataa atccatcgct
    26341 gatggtgcag aactttagta cccgataaaa gcggcttcct gacaggaggc cgttttgttt
    26401 tgcagcccac ctcaacgcac ttatttagtg catccatctg ctatctccag ctgattaagt
    26461 aaattttttg tatccacatc atcacacaat cgttacataa agattgtttt ttcatcaggt
    26521 tttacgctaa ataatcactg tgttgagtgc acaattttag cgcaccagat tggtgcccca
    26581 gaatggtgca tcttcagggt attgccctat aaatcgtgca tcacgttttt gccgcatctc
    26641 taaaaatcaa tgagttgcaa aactggcacg attttttcat atatgtgaat gtcacgcagg
    26701 ggatcgtccc gtggatagaa aaaaggaaat gctatgaagt ctgtattaaa agtttcactg
    26761 gctgcactga ccctggtttt tgcggtttct tctcatgccg cggataaaaa attagttgtc
    26821 gcgacggata ccgccttcgt tccgtttgaa tttaaacagg gcgataaata tgtgggcttt
    26881 gacgttgatc tgtgggctgc catcgctaaa gagctgaagc tggattacga actgaagccg
    26941 atggatttca gtgggatcat tccggcactg caaaccaaaa acgtcgatct ggcgctggcg
    27001 ggcattacca tcaccgacga gcgtaaaaaa gcgatcgatt tctctgacgg ctactacaaa
    27061 agcggcctgt tagtgatggt gaaagctaac aataacgatg tgaaaagcgt gaaagatctc
    27121 gacgggaaag tggttgctgt gaagagcggt actggctccg ttgattacgc gaaagcaaac
    27181 atcaaaacta aagatctgcg tcagttcccg aacatcgata acgcctatat ggaactgggc
    27241 accaaccgcg cagacgccgt tctgcacgat acgccaaaca ttctgtactt catcaaaacc
    27301 gccggtaacg gtcagttcaa agcggtaggt gactctctgg aagcgcagca atacggtatt
    27361 gcgttcccga aaggttgcga cgagctgcgt gacaaagtca acggcgcgtt gaaaaccctg
    27421 cgcgagaacg gaacttacaa cgaaatctac aaaaaatggt tcggtactga accgaaataa
    27481 taacgctaca cctgtaaagc gcactggcag ttccctctcc cctctgggga gaggattagg
    27541 gtgaggggcg caaacccgct ccggggccat taattaccct gaatttgatt atttacacca
    27601 cggtaacagg aacaacatat gcagtttgac tggagtgcca tctggcctgc cattccgctt
    27661 ctgattgaag gtgccaaaat gaccctgtgg atttcggtcc tcggtctggc tggcggtctg
    27721 gtaatcggat tgctggcagg ttttgcacgc accttcggtg gttggatagc caaccacgtc
    27781 gcgctggtct ttattgaagt gatccgcggc acacctatcg tcgtccaggt gatgtttatc
    27841 tatttcgccc tgccgatggc gtttaacgac ttacgcatcg acccatttac tgcggcggtg
    27901 gtcaccatca tgatcaactc cggcgcgtac attgcggaaa tcacgcgtgg tgcggtgctg
    27961 tctattcaca aaggttttcg tgaagcagga ctggcgctcg gtctttcacg ttgggaaacc
    28021 attcgctaca tcattttacc gctggcactg cgtcgtatgc tgccgccgct gggtaaccag
    28081 tggatcatca gcattaaaga cacctcgctg tttattgtta tcggcgtggc ggaactgacc
    28141 cgtcaggggc aagaaattat tgccggtaac ttccgcgccc ttgagatctg gagcgccgtg
    28201 gcggtgttct atctgattat taccctggtg ctgagcttta ttctgcgtcg tctggaaaga
    28261 aggatgaaaa tcctgtgatt gaatttaaaa acgtctccaa gcactttggc ccaacccagg
    28321 tgctgcacaa tatcgatttg aacattgccc agggcgaagt cgtggtgatt atcgggccgt
    28381 ccggttccgg taaatcgacc ctgctgcgct gcatcaacaa actggaagaa atcacctccg
    28441 gcgatctgat tgtcgatggc ctgaaggtta acgatccgaa agttgacgag cgcctgattc
    28501 gccaggaagc aggtatggtg ttccagcagt tttacctctt cccgcatctg acggcgctgg
    28561 aaaacgtcat gtttggtccg ctacgcgtgc gtggcgcgaa caaagaagag gcggaaaaac
    28621 tggcgcgtga gctgctggcg aaagtcggtc tggcagaacg tgcacatcac tacccttccg
    28681 aactttctgg tggtcaacag cagcgtgtgg cgattgcccg cgcgctggcg gtgaagccga
    28741 aaatgatgct gtttgatgaa ccgacttccg ctcttgaccc ggaactgcgc catgaagtgc
    28801 tgaaggttat gcaggatctg gctgaagaag ggatgacgat ggtgatcgtg acccacgaaa
    28861 tcggttttgc cgagaaagta gcttcgcggc tgatctttat cgacaaaggc cggattgcgg
    28921 aagatggcaa tccgcaggtg ttgatcaaga acccgccgag ccagcgcttg caggaatttt
    28981 tgcagcacgt ctcttaataa gacacattgc ctgatgcgct acgcttatca ggcctacagg
    29041 atatctggca acttattaaa attgcatgaa cttgtaggac ggataaggcg ttcacgccgc
    29101 atccggcaaa aaagcccgca cgttgtcagc aatctgctta atatcccttc ctccctttca
    29161 cccgaaaggg aggcacacca gattcctctc atttaaaatc
//
LOCUS       DADMHC010000034        29161 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.034, whole genome shotgun sequence.
ACCESSION   DADMHC010000034 DADMHC010000000
VERSION     DADMHC010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29161)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29161)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29161
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.034"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            162..605
                     /locus_tag="JNZ57_001208"
     CDS             162..605
                     /locus_tag="JNZ57_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004997737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY8827496.1"
                     /translation="MDLALVTGQREGDLAAMRWEDIRDGRLYVEQQKTGAKIRISLPT
                     TISRLNLTLTDVLDNLKKINGKNEKLLGGKTARTIAAQFRIARDTSGLKWEGDPPPFH
                     EIRSLSGRLHSAEKGSDFTQALLGHRSSSMTDKYRDGRGREWKDI"
     gene            841..1659
                     /locus_tag="JNZ57_001209"
     CDS             841..1659
                     /locus_tag="JNZ57_001209"
                     /EC_number="3.1.3.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphatase"
                     /protein_id="HAY8827497.1"
                     /translation="MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIITG
                     RHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHI
                     HGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFAL
                     THDDMPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENV
                     VAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI"
     gene            complement(1660..2718)
                     /gene="modC"
                     /locus_tag="JNZ57_001210"
     CDS             complement(1660..2718)
                     /gene="modC"
                     /locus_tag="JNZ57_001210"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein
                     ModC"
                     /protein_id="HAY8827498.1"
                     /translation="MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAI
                     SGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMA
                     KSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLD
                     IPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWG
                     SSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQ
                     ASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELA
                     IKPGLWLYAQIKSVSITA"
     gene            complement(2721..3410)
                     /gene="modB"
                     /locus_tag="JNZ57_001211"
     CDS             complement(2721..3410)
                     /gene="modB"
                     /locus_tag="JNZ57_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HAY8827499.1"
                     /translation="MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGK
                     ALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVM
                     SFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARS
                     LGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEW
                     LARISRERAGR"
     gene            complement(3410..4183)
                     /gene="modA"
                     /locus_tag="JNZ57_001212"
     CDS             complement(3410..4183)
                     /gene="modA"
                     /locus_tag="JNZ57_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8827500.1"
                     /translation="MARKWLNLFAGAALSFAVAGNTLADEGKITVFAAASLTNAMQDI
                     ATQYKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTASRQ
                     TLLGNSLVVVAPKASEQKDFIIDSTTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKL
                     GAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVVSKGVKVVATFPEDSHKKV
                     EYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTTK"
     gene            complement(4349..4498)
                     /locus_tag="JNZ57_001213"
     CDS             complement(4349..4498)
                     /locus_tag="JNZ57_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux pump-associated protein, AcrZ
                     family"
                     /protein_id="HAY8827501.1"
                     /translation="MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQ
                     PGQNH"
     gene            4627..5415
                     /gene="modE"
                     /locus_tag="JNZ57_001214"
     CDS             4627..5415
                     /gene="modE"
                     /locus_tag="JNZ57_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum-dependent transcriptional regulator"
                     /protein_id="HAY8827502.1"
                     /translation="MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGIS
                     YKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDV
                     LSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKV
                     AITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNANNQLPGIISHIERGAEQCE
                     VLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC"
     gene            5483..6955
                     /gene="modF"
                     /locus_tag="JNZ57_001215"
     CDS             5483..6955
                     /gene="modF"
                     /locus_tag="JNZ57_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter ATP-binding protein
                     ModF"
                     /protein_id="HAY8827503.1"
                     /translation="MSSLQILQGTFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSA
                     LARALAGELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTGRTT
                     AEIIQDEVKDAPRCMQLAQQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILD
                     EPFDGLDVASRQQLAERLASLHQSGITLVLVLNRFDEIPEFVQFAGVLADCTLAETGA
                     KEELLQQALVAQLAHSEQLEGVQLPEPDEPSARHALPANEPRIVLNNGVVSYNDRPIL
                     NNLSWQVNPGEHWQIVGPNGAGKSTLLSLVTGDHPQGYSNDLTLFGRRRGSGETIWDI
                     KKHIGYVSSSLHLDYRVSTTVRNVILSGYFDSIGIYQAVSDRQQKLVQQWLDILGIDK
                     RTADAPFHSLSWGQQHLALIVRALVKHPTLLILDEPLQGLDPLNRQLIRRFVDVLISE
                     GETQLLFVSHHAEDAPACITHRLEFVPDGGLYRYVLTKIY"
     gene            7216..8232
                     /gene="galE"
                     /locus_tag="JNZ57_001216"
     CDS             7216..8232
                     /gene="galE"
                     /locus_tag="JNZ57_001216"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308814.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HAY8827504.1"
                     /translation="MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI
                     ERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVN
                     GTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL
                     TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIF
                     GNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGIGSSVLDVVNAF
                     SKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQ
                     GYPD"
     gene            8242..9288
                     /gene="galT"
                     /locus_tag="JNZ57_001217"
     CDS             8242..9288
                     /gene="galT"
                     /locus_tag="JNZ57_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-phosphate uridylyltransferase"
                     /protein_id="HAY8827505.1"
                     /translation="MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQV
                     LPAHDPDCFLCAGNVRVTGDKNHDYTGTYVFTNDFAALMSDTPDAPESNDPLMRCQSA
                     HGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGC
                     SNPHPHGQIWANSFLPNEAEREDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEH
                     WLAVVPYWAAWPFETLLLPKAHVLRITDLTDALRSDLALALKKLTSRYDNLFQCSFPY
                     SMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAER
                     LRAVSDIHFRESGV"
     gene            9292..10440
                     /gene="galK"
                     /locus_tag="JNZ57_001218"
     CDS             9292..10440
                     /gene="galK"
                     /locus_tag="JNZ57_001218"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001713229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HAY8827506.1"
                     /translation="MSLKEKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVL
                     PCAIDYQTVISCAPRDDRKVRVMAADYENQLDEFSLNAPIVAHENYQWANYVRGVVKH
                     LQLRNNSFGGVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQE
                     AENQFVGCNCGIMDQLISALGKKDHSLLIDCRSLGTKAVSMPKGVAVVIINSNFKRTL
                     VGSEYNTRREQCETGARFFQQPALRDVTIEEFNAVAHELDPIVAKRVRHILTENARTV
                     EAASALEQGDLKRMGELMAESHASMRDDFEITVPQIDTLVEIVKAVIGDKGGVRMTGG
                     GFGGCIVALIPEELVPAVQQAVAEQYEAKIGIKETFYVCKPSQGAGQC"
     gene            10434..11474
                     /gene="galM"
                     /locus_tag="JNZ57_001219"
     CDS             10434..11474
                     /gene="galM"
                     /locus_tag="JNZ57_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-epimerase"
                     /protein_id="HAY8827507.1"
                     /translation="MLNETPALAPDGQPYRLLTLRNNAGMVVTLMDWGATLLSARIPL
                     SDGSVREALLGCASPECYQDQAAFLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQ
                     LHGGPEGFDKRRWQIVNQNDRQVLFALSSDDGDQGFPGNLGATVQYRLTDDNRISITY
                     RATVDKPCPVNMTNHVYFNLDGEQSDVRNHKLQILADEYLPVDEGGIPHDGLKSVAGT
                     SFDFRSAKIIASEFLADDDQRKVKGYDHAFLLQAKGDGKKVAAHVWSADEKLQLKVYT
                     TAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFLPDSPNHPEWPQPDCFLRPGEE
                     YSSLTEYQFIAE"
     gene            11676..12428
                     /gene="gpmA"
                     /locus_tag="JNZ57_001220"
     CDS             11676..12428
                     /gene="gpmA"
                     /locus_tag="JNZ57_001220"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000301556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HAY8827508.1"
                     /translation="MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKL
                     LKEEGYSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAE
                     TAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDR
                     VIPYWNETILPRMKSGERVIIAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEF
                     DENFKPLKRYYLGNADEIAAKAAAVANQGKAK"
     gene            complement(12586..13638)
                     /gene="aroG"
                     /locus_tag="JNZ57_001221"
     CDS             complement(12586..13638)
                     /gene="aroG"
                     /locus_tag="JNZ57_001221"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001109196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HAY8827509.1"
                     /translation="MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIH
                     KILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTV
                     GWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWG
                     AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHS
                     AIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFK
                     KQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDT
                     DALLRQLANAVKARRG"
     gene            13954..14334
                     /locus_tag="JNZ57_001222"
     CDS             13954..14334
                     /locus_tag="JNZ57_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827510.1"
                     /translation="MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAATDAGQ
                     VAPDARENVAPNNVDNNGVNTGSGGTMLHSDGSSMNNDGMTKDEEHKNTMCKDGRCPD
                     INKKVQTGDGINNDVDTKTDGTTQ"
     gene            14448..15389
                     /gene="zitB"
                     /locus_tag="JNZ57_001223"
     CDS             14448..15389
                     /gene="zitB"
                     /locus_tag="JNZ57_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family zinc transporter ZitB"
                     /protein_id="HAY8827511.1"
                     /translation="MAHSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVVGGFLSGS
                     LALLADAGHMLTDTAALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVIT
                     ILIVWEAIERFRTPRPVEGGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHV
                     LGDLLGSVGAIIAALIIIWTGWTPADPILSIVVSLLVLRSAWRLLKDSVNELLEGAPV
                     SLDIAELKRRMCREIPEVRNVHHVHVWMVGEKPVMTLHVQVIPPHDHDALLDQIQHYL
                     MAHYQIEHATIQMEYQPCHGPDCHLNEGVSGHSHHHH"
     gene            complement(15386..16105)
                     /locus_tag="JNZ57_001224"
     CDS             complement(15386..16105)
                     /locus_tag="JNZ57_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide riboside transporter PnuC"
                     /protein_id="HAY8827512.1"
                     /translation="MDFFSVQNILVHIPIGAGGYDLSWIEAVGTIAGLLCIGLASLEK
                     ISNYFFGLINVTLFGIIFFQIQLYASLLLQVFFFAANIYGWYAWSRQTSQNEAELKIR
                     WLPLPKALSWLAVCVVSIGLMTVFINPVFAFLTRVAVMIMQALGLQVVMPELQPDAFP
                     FWDSCMMVLSIVAMLLMTRKYVENWLLWVIINVISVVIFALQGVYAMSLEYIILTFIA
                     LNGSRMWINSARERGSCALSH"
     gene            complement(16143..17186)
                     /gene="nadA"
                     /locus_tag="JNZ57_001225"
     CDS             complement(16143..17186)
                     /gene="nadA"
                     /locus_tag="JNZ57_001225"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HAY8827513.1"
                     /translation="MSVMFDPDTAIYPFPPKPTPLSIDEKAYYREKIKRLLKERNAMM
                     VAHYYTDPEIQQLAEETGGCISDSLEMARFGAKHPASTLLVAGVRFMGETAKILSPEK
                     TILMPTLQAECSLDLGCPVEEFNAFCDAHPDRTVVVYANTSAAVKVRADWVVTSSIAV
                     ELIDHLDSLGEKIIWAPDKHLGRYVQKQTGGDILCWQGACIVHDEFKTQALTRLQEEY
                     PDAAILVHPESPQAIVDMADAVGSTSQLIAAAKTLPHQRLIVATDRGIFYKMQQAVPD
                     KELLEAPTAGEGATCRSCAHCPWMAMNGLQAIAEALEQEGSNHEVHVDERLRERALVP
                     LNRMLDFAATLRG"
     gene            complement(17435..17510)
                     /locus_tag="JNZ57_001226"
     tRNA            complement(17435..17510)
                     /locus_tag="JNZ57_001226"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17475..17477),aa:Lys,seq:ttt)
     gene            complement(17657..17732)
                     /locus_tag="JNZ57_001227"
     tRNA            complement(17657..17732)
                     /locus_tag="JNZ57_001227"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17697..17699),aa:Lys,seq:ttt)
     gene            complement(17736..17811)
                     /locus_tag="JNZ57_001228"
     tRNA            complement(17736..17811)
                     /locus_tag="JNZ57_001228"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17776..17778),aa:Val,seq:tac)
     gene            complement(17961..18036)
                     /locus_tag="JNZ57_001229"
     tRNA            complement(17961..18036)
                     /locus_tag="JNZ57_001229"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(18001..18003),aa:Lys,seq:ttt)
     gene            complement(18039..18114)
                     /locus_tag="JNZ57_001230"
     tRNA            complement(18039..18114)
                     /locus_tag="JNZ57_001230"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(18079..18081),aa:Val,seq:tac)
     gene            complement(18150..18225)
                     /locus_tag="JNZ57_001231"
     tRNA            complement(18150..18225)
                     /locus_tag="JNZ57_001231"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(18190..18192),aa:Lys,seq:ttt)
     gene            complement(18390..19181)
                     /gene="cpoB"
                     /locus_tag="JNZ57_001232"
     CDS             complement(18390..19181)
                     /gene="cpoB"
                     /locus_tag="JNZ57_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein CpoB"
                     /protein_id="HAY8827514.1"
                     /translation="MSSNFRHQLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQ
                     LERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLS
                     SGGAAAQSTSSDQSGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQD
                     DAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAAD
                     AMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM"
     gene            complement(19191..19712)
                     /gene="pal"
                     /locus_tag="JNZ57_001233"
     CDS             complement(19191..19712)
                     /gene="pal"
                     /locus_tag="JNZ57_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HAY8827515.1"
                     /translation="MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMD
                     ANGGNGNMSSEEQARLQMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYK
                     VTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDE
                     AAYSKNRRAVLVY"
     gene            complement(19747..21039)
                     /gene="tolB"
                     /locus_tag="JNZ57_001234"
     CDS             complement(19747..21039)
                     /gene="tolB"
                     /locus_tag="JNZ57_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001646851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HAY8827516.1"
                     /translation="MKQALRVAFGFLILWASVLHAEVRIVIDSGVDSGRPIGVVPFQW
                     AGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEVQPSAWSALGIDAVVVG
                     QVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK
                     GAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVT
                     FESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA
                     SGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQN
                     QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYS
                     SSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL"
     gene            complement(21172..22359)
                     /gene="tolA"
                     /locus_tag="JNZ57_001235"
     CDS             complement(21172..22359)
                     /gene="tolA"
                     /locus_tag="JNZ57_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HAY8827517.1"
                     /translation="MSKATEQNDKLKRAIIISAVLHVILFAALIWSSFDENIEASAGG
                     GGGSSIDAVMVDSGAVVEQYKRMQSQESSAKRSDEQRKMKEQQAAEELREKQAAEQER
                     LKQLEKERLAAQEQKKQAEEAAKQAELKQKQAEEAAAKAAADAKAKAEADAKAKAEAD
                     AKAAEEAAKKAAADAKKKAEAEAAKAAAQKKAEAAAAALKKKAEAAEAAAAEARKKAA
                     TEAAEKAKAEAEKKAAAEKAAADKKAAEKAAAEKAAADKKAAAEKAAAEADDIFGELS
                     SGKNAPKTGGGAKGNNASPAGSGNTKNNGASGADINNYAGQIKSAIESKFYDASSYAG
                     KTCTLRIKLAPDGMLLDIKPEGGDPALCQAALAAAKLAKIPKPPSQAVYEVFKNAPLD
                     FKP"
     gene            complement(22424..22852)
                     /gene="tolR"
                     /locus_tag="JNZ57_001236"
     CDS             complement(22424..22852)
                     /gene="tolR"
                     /locus_tag="JNZ57_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin uptake protein TolR"
                     /protein_id="HAY8827518.1"
                     /translation="MARARGRGRRELKSEINIVPLLDVLLVLLLIFMATAPIITQSVE
                     VDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKAN
                     PKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI"
     gene            complement(22856..23548)
                     /gene="tolQ"
                     /locus_tag="JNZ57_001237"
     CDS             complement(22856..23548)
                     /gene="tolQ"
                     /locus_tag="JNZ57_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolQ"
                     /protein_id="HAY8827519.1"
                     /translation="MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNA
                     AAREAEAFEDKFWSGIELSRLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPE
                     AVVEGASRAMRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVK
                     QATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILH
                     RQAFTVSESNKG"
     gene            complement(23545..23949)
                     /gene="ybgC"
                     /locus_tag="JNZ57_001238"
     CDS             complement(23545..23949)
                     /gene="ybgC"
                     /locus_tag="JNZ57_001238"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HAY8827520.1"
                     /translation="MNTTLFRWLVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHH
                     FSQQALMAERVAFVVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQRIVNAENT
                     LLNEAEVLVVCVDPLKMKPRALPKSIVAEFKQ"
     gene            complement(24099..24392)
                     /gene="ybgE"
                     /locus_tag="JNZ57_001239"
     CDS             complement(24099..24392)
                     /gene="ybgE"
                     /locus_tag="JNZ57_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyd operon protein YbgE"
                     /protein_id="HAY8827521.1"
                     /translation="MSKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTS
                     ELEIWHGLLLMWAVCAGVIHGVGFRPQKVLWQGIFCPLLADIVLIIGLIFFFF"
     gene            complement(24392..24505)
                     /gene="cydX"
                     /locus_tag="JNZ57_001240"
     CDS             complement(24392..24505)
                     /gene="cydX"
                     /locus_tag="JNZ57_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-I oxidase subunit CydX"
                     /protein_id="HAY8827522.1"
                     /translation="MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI"
     gene            complement(24520..25659)
                     /gene="cydB"
                     /locus_tag="JNZ57_001241"
     CDS             complement(24520..25659)
                     /gene="cydB"
                     /locus_tag="JNZ57_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000568269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HAY8827523.1"
                     /translation="MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDT
                     ERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPV
                     GFDYRSKIEETRWRNMWDWGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGN
                     FFQLLNPFGLLAGVVSVGMIITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALA
                     GVWVMYGIDGYVVKSTMDHYAASNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLP
                     LLTILTARMDKAAWAFVFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQ
                     LTLNVMTWVAVVLVPIILLYTAWCYWKMFGRITKEDIERNTHSLY"
     gene            complement(25675..27243)
                     /gene="cydA"
                     /locus_tag="JNZ57_001242"
     CDS             complement(25675..27243)
                     /gene="cydA"
                     /locus_tag="JNZ57_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HAY8827524.1"
                     /translation="MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSG
                     KQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLM
                     AFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFN
                     FETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKR
                     SFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPD
                     QEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSG
                     STDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRI
                     MVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQP
                     WAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGR
                     YHFEQSSTTTQPAR"
     gene            complement(28091..>29161)
                     /locus_tag="JNZ57_001243"
     CDS             complement(28091..>29161)
                     /locus_tag="JNZ57_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HAY8827525.1"
                     /translation="IEESSDDGDEYDYSPAKEEWVITAANAKPQCDIIHEVWQSRAVI
                     RYDMAVPLNLSERSARQSTGRVGVVLVVTLSHNSRRIDVDINLDNQADDHRLRVLVPT
                     PFNTDSVLADTQFGSLTRPVNDSAMNNWQQEGWKEAPVPVWNMLNYVALQEGRNGMAV
                     FSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRPGRPSGIKMPVPDSQLRGLLS
                     CRLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDAMKLNKAGFNVPESYSLLKMP
                     PVGCLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVISCSETMMDEHITTEEN
                     QGSNLSGPFLPGQSRTFSYRLA"
BASE COUNT         7362 a         7666 c         7104 g         7029 t
ORIGIN      
        1 acatttttaa aacagctata gcttctggtc ttgccgaaga agatccagct tctgcaacca
       61 ggccattcag aactgaagtg aagcgcagtc gactgttaat tgacgagtat ctgttaatca
      121 ggaaaatagc agacgtccag aacgaatggt tcggcctttg catggatctt gcactggtaa
      181 caggacagcg cgaaggagat ctggcggcta tgagatggga ggatataaga gatggcaggc
      241 tatacgtgga acaacaaaaa acaggggcaa aaattcgcat ttctctcccc accacgattt
      301 ccagattgaa tttaacactt accgatgtac tggataactt gaaaaaaata aacggtaaaa
      361 acgaaaagtt actcggaggg aagacagcca ggacaatcgc agcacagttc aggattgccc
      421 gagacacatc cggattgaaa tgggaaggtg acccaccgcc atttcatgaa atccgaagtt
      481 tatccggtcg cctgcactca gcagaaaaag gcagtgattt cactcaggcg ctccttggac
      541 atcgttcatc cagcatgacg gataaatacc gtgacggacg agggagggaa tggaaagaca
      601 tttagaatta atttcgaacg atttcgaaac accacttgta attaattgat tataaaggat
      661 taattcctaa gaggcatttg cttcatgaat gctcctttgc atttagcaac tgactgtaac
      721 agctaaaatt agtcgctttt ggcggtgaat gctgaattaa aacgcagaat tttgtccgat
      781 agtggtatcg gtgtaccatt cgcgcagacg aaaattctta accttaatct ggaatacgcc
      841 atgaccacac gcgtgattgc tctcgactta gacggcacct tattgacccc gaaaaagacc
      901 ctgcttcctt catcgataga agccctggcc cgcgctcgcg aagcaggcta tcaattaatc
      961 atcatcacag gtcgccatca cgtcgctatt catccttttt atcaggcgct ggcgctggat
     1021 acacctgcta tttgctgtaa tggcacctat ttgtatgatt atcatgcaaa aaccgtgctg
     1081 gaagcggacc caatgcccgt taataaagcc ctgcaactca ttgagatgct gaatgaacac
     1141 cacattcacg gtctgatgta tgtggatgat gcaatggtct atgagcaccc gaccgggcat
     1201 gtcattcgca cgtctaactg ggcgcaaacc ctgccgccgg aacagcgtcc gactttcaca
     1261 caagtcgctt ctctggctga aacggcgcaa caagttaacg ccgtatggaa gttcgccctg
     1321 acgcacgatg acatgccgca attgcagcat tttggtaagc atgtcgaaca tgaactggga
     1381 ctggagtgtg aatggtcctg gcacgatcag gttgatattg cacgcggcgg caacagcaaa
     1441 ggtaaacgtt tgacgaaatg ggttgaggcg caaggctggt cgatggaaaa cgtcgtggcg
     1501 ttcggcgata actttaatga tatcagtatg ctggaggccg ctggtacagg cgtggcgatg
     1561 ggcaacgccg atgacgcggt aaaagcgcgc gccaacattg tgattggtga taacaccacc
     1621 gacagcattg cccagttcat ttatagccac ctgatttaat caggcggtta tcgacacact
     1681 tttaatttgc gcgtacagcc acaggcctgg tttgatcgcc agttcatccc tggcccacgg
     1741 gctgatacgc gcccacagcg ttttaccgcc gacttccagc tccacttcca cctgaccgtt
     1801 gtcgtcataa ctattaacaa cttttgcccg caatacgtta cgaatgctgg tttgctgcgg
     1861 cggttgtaaa accagagaaa catcggaagc ctgaatgcgg atacgtagcg cagcttgcag
     1921 cggttcgtcc agcttattga cccacaaatg ctgatcgccc agcgccagcg cggtcatcgc
     1981 gtaatgcgga tgatgctcaa gcaccgtcac tttcagaatg ctactttgtt gctctttcgg
     2041 cagccacgga ttcatcacgc tactacccca gacttcttcc agtgcgccaa aggctttcac
     2101 ctgaccgttt tccagtacca tcactctgtc tgccagatgg aggatctcat ccagcgaatg
     2161 gctgacatac aacatcggga tgttgatttc ccgcgtcaga cgttgcagat aaggcaacag
     2221 ttcgcgttta cgcggaatat ccagtgacgc cagcggttca tccagcaaca gcaattctgg
     2281 tgccgtcagc aaagcccgcc caatcgctac gcgctgtttt tcgcctccgg acaggctgcc
     2341 tggtaaacgg tcaagcaacg gttcaatgcc taaaagcgcc accagcttat cgaactgatc
     2401 gaccatgctt ttcgccatgc cgtagcgcag attgccacgc actttgtaat gcggaaacag
     2461 ccgcgcatcc tgaaaaacat agccaacgcg acgcttttct ggcgtcaggc agataccttt
     2521 ttcggcatca tttagtaccc gaccattgag gacaatcctc cctttttgcg ggcgcgtcag
     2581 tccactgatg gcgttaatca gcgaagtttt tccggcaccg gagacgccaa aaatagcagt
     2641 gatgccattg gcgggcagcg tttcattaat agtcaggcaa tggttgccca acgtctggga
     2701 aaaattcagt tccagcatga ttagcgcccc gcccgttcac ggctgattct ggccagccat
     2761 tctgaaatca acagggagat catcgccagc gcaatagaaa taatgcacag tctcgccgcg
     2821 ccactttccc cgccgggggt ctggatcagg gtatacatgg cagagggaat ggttcgcgtt
     2881 tcgccaggaa tgttcgacac aaaggtgatg gttgcaccaa actcaccgag agaacgagca
     2941 aaagccagta ccgtaccaac aataattccc ggtaaggtca gcggtaacgt gatagtaaag
     3001 aaaacgcgcc agcgcccggc acctagtgtt cttgcggcct gttcgagttt gacatcaacc
     3061 ccttccagcg ccagacgaat tgcccgcacc atcagcggaa acgacatgac ggcggcagcg
     3121 agaaccgcgc cgcgccagct aaaggcgaag gtaataccaa accagtcata cagacgttca
     3181 ccgataaatc cgcgccgtcc catcgaaact aataataagt aaccgacgac cacgggcggt
     3241 aacaccagcg gtagatgcag tacgctgtcg agcagagctt tgcccggaaa cgtgcaacgc
     3301 actagtaacc aggcaaaaaa gatcccaaac ggcaggctaa acagcacagc cagggaagaa
     3361 actttcaggc ttaataaaac tgcctgccat tctggatcgg tcagtatcat tacttggttg
     3421 taaatccgta acgtttaaag atttccgctg cctgcggtcc cttcagataa tcataaaatg
     3481 ctttcactgt cgcattgtta tgcccttcca caacagcaac cggatattcc acttttttat
     3541 gtgaatcttc cgggaaggtg gcaaccactt ttaccccttt gctgacaact gcgtcagaac
     3601 cgtaaacaat gcccaacggc gcttcattgc gttcgaccaa cgccagcgcg ccacgaacat
     3661 cttccgccgg agccaatttc ggggagagcg tatcccatgc gcccagtttt tgcagtgctt
     3721 cttttgcata aatgccagca gggacatgtt ccggatcgcc aaccgcgagg cgaccgccat
     3781 tcagcagcga agtccagtta gttgtgctgt cgatgatgaa atctttctgc tcgctggctt
     3841 tcggtgctac aacgaccagg ctattgccga gcagtgtctg ccgcgaagcc gtatcgatcg
     3901 cttttttatc aaccgcataa tccatccatt tctgatcggc agagataaac agatccgcag
     3961 gcgctcccgc ttcaatctga cgggccagag tagatgacga agcgaaagaa gaaaccacat
     4021 ccacgccttt ttctttttta tactgcgtag caatgtcctg cattgcgtta gtcagtgatg
     4081 cggcggcgaa caccgtgatt ttcccttcat ctgccagtgt attgccagca acagcgaaag
     4141 agagtgccgc cccggcaaac aagttcaacc atttacgagc cattggtaac cccttaatgt
     4201 aacgttatat aggtgacaac ataacggcta gctcagaatt ttcccagcag ttattgctaa
     4261 cctttgtgag gtagataaga aaaaatatcg gctggaaaag caggaagttg agaaaaagaa
     4321 atgcccgact aagtgggcat tcagggaatc aatgattttg tccgggctgg tcttttttac
     4381 caacaccaga aaagatgttg aatacttcac caagaccgta aatcagaccc aggatgatgg
     4441 ccatcacgac aggtaccatg attacggcga ataccagact ttttaataac tctaacatgg
     4501 tcaactccag atatagtcat gagactattc taaccgctaa gcacagaaaa gcactcccct
     4561 tttgtgcggt cagctttgcg tggcgttcgt tttccgtcac aataagactt ttgccaggac
     4621 attgttatgc aggccgaaat ccttctcacc cttaagctcc aacaaaaatt attcgccgac
     4681 ccgcgccgga tttcgctact aaaacacatt gcgctttccg gttccattag ccagggagcg
     4741 aaagatgccg gtatcagcta taaaagcgcc tgggatgcca ttaacgagat gaatcagtta
     4801 agcgagcata ttctggttga gcgcgcaaca ggcggtaaag gtggcggcgg cgcagtactg
     4861 acccgctatg gtcagcgact gattcagctc tatgacttac tggcgcaaat ccagcaaaaa
     4921 gcctttgatg tgttaagtga cgatgacgcc ctgccgctga acagcctgct ggccgcgatc
     4981 tcacgttttt cactgcaaac cagcgcccgt aaccagtggt tcggtaccat caccgcccgc
     5041 gatcatgatg acgttcaaca gcatgttgat gtcttactgg ctgacggaaa aacacgcctg
     5101 aaagtcgcaa ttaccgcaca aagcggcgca cgtctggggc tggatgaagg caaagaagtg
     5161 ttgatattgc taaaagcgcc gtgggtaggc attactcagg acgaagcggt cgcacaaaac
     5221 gccaacaacc aattaccggg tattattagt catattgagc gcggcgcaga gcagtgcgaa
     5281 gtattaatgg cgctacccga cgggcaaaca ctgtgcgcca cagtgccggt aaatgaagcg
     5341 acttctcttc agcaagggca gaatgtcacg gcctacttta atgccgacag cgtgattatc
     5401 gccacgctgt gctaagcgtg ttgacaattt gttatgaaac acgtatccct gtcagtaatc
     5461 gctgcacaaa atgggatata atatgtcatc gttgcaaatt ttgcaaggca cgtttcgtct
     5521 tagcgacaca aaaacgctgc aattgcctca gctaacgtta aacgcgggtg atagttgggc
     5581 gtttgtcggt tcgaatggaa gcgggaaatc ggccctggcc cgcgcgctgg cgggggaact
     5641 tccgcttttg aaaggtgaac ggcaaagcca gttttcccac atcactcgtc tctccttcga
     5701 gcaattgcaa aaactcgtca gcgacgaatg gcagcggaat aacaccgata tgctcggccc
     5761 tggcgaagat gacaccggac gcactacggc tgagatcatt caggatgaag taaaggatgc
     5821 accgcgttgc atgcaactgg cgcagcagtt cggtattacc gccctcctcg accgacgctt
     5881 taaatacctt tccactggcg agacgcgaaa aaccctgctg tgtcaggcgc tgatgtcgga
     5941 gcctgacttg ttgattcttg atgagccgtt cgatggcctg gatgttgcct cacgtcagca
     6001 gctggctgag cgactcgcct cgttacatca gtccggtatt actctggtac tggtgctcaa
     6061 tcgcttcgat gagatcccgg agtttgtcca gtttgctggc gtgctggcgg attgcacgtt
     6121 agcggaaact ggcgctaaag aggaactgct ccaacaagca ctcgtcgcgc aactggcaca
     6181 tagtgaacag cttgaaggtg tgcaactgcc ggagccggat gaaccttcag cacgtcacgc
     6241 cttacccgcc aacgaaccgc gcattgtgct gaacaatggc gtggtttctt ataacgatcg
     6301 ccccattctt aataacctta gctggcaggt gaatccaggt gaacactggc aaattgtcgg
     6361 gccaaatggt gcaggaaaat cgacgttatt aagcctggtt actggcgatc atccgcaagg
     6421 ttacagcaac gatttgacgc ttttcggacg acgtcgcggc agcggcgaaa ccatctggga
     6481 tatcaaaaag catatcggtt acgtcagcag tagtttgcat ctggattacc gggtcagcac
     6541 taccgtgcgt aatgtgattc tttctggcta ttttgattcg attggcattt atcaggccgt
     6601 ttcggatcgc cagcaaaaac tggtgcagca gtggctggat attctcggca ttgataaacg
     6661 tacggctgac gctccgttcc atagtctttc ctggggacag cagcatctgg cgctgatcgt
     6721 ccgcgcactg gtgaaacatc cgacgttgct tattctcgat gaaccactac aggggcttga
     6781 tccgctcaat cgccagctta tccgccgttt tgttgatgtg ctgattagcg aaggtgaaac
     6841 gcaattgttg tttgtttcgc accacgctga agatgcgcct gcctgtatta cccatcgcct
     6901 tgagttcgtg ccggacggtg gactctatcg ctatgtgctg acaaaaatat attgagtcgg
     6961 taatgctgac cttgccggag gcggcctaag cgccctctcc ggccaacggt tcgacgcatg
     7021 caggcatgaa accgcttctt ttttcagata aaaagcgcaa tcattcataa accctctgtt
     7081 ttataatcac ttaatcgcgc ataaaaaacg gctaaattct tgtgtaaacg attccactaa
     7141 tttattccat gtcacacttt tcgcatcttt gttatgctat ggttatttca taccataagc
     7201 ctaatggagc gaattatgag agttctggtt accggtggta gcggttacat tggaagtcat
     7261 acctgcgtgc aattactgca aaacggtcat gatgtcatca ttcttgataa cctctgtaac
     7321 agtaagcgca gcgtactgcc tgttatcgag cgtttaggcg gcaaacatcc aacgtttgtt
     7381 gaaggcgata ttcgtaacga agcgttgatg accgagatcc tgcacgatca cgctatcgac
     7441 accgtgatcc acttcgccgg gctgaaagcc gttggcgaat cggtacaaaa accgctggaa
     7501 tattacgaca acaatgtcaa cggtactctg cgcctgatta gcgccatgcg cgccgctaac
     7561 gtcaaaaact ttatttttag ctcctccgcc accgtttatg gcgatcagcc caaaattcca
     7621 tacgttgaaa gcttcccgac cggcacaccg caaagccctt acggcaaaag caagctgatg
     7681 gtggaacaga tcctcaccga tctgcaaaaa gcccagccgg actggagcat tgccctgctg
     7741 cgctacttca acccggttgg cgcgcatccg tcgggcgata tgggcgaaga tccgcaaggc
     7801 attccgaata acctgatgcc atacatcgcc caggttgctg taggccgtcg cgactcgctg
     7861 gcgatttttg gtaacgatta tccgaccgaa gatggtactg gcgtacgcga ttacatccac
     7921 gtaatggatc tggcggacgg tcacgtcgtg gcgatggaaa aactggcgaa caagccaggc
     7981 gtacacatct acaacctcgg cgctggcata ggcagcagcg tgctggacgt ggttaatgcc
     8041 ttcagcaaag cctgcggcaa accggttaac tatcattttg caccgcgtcg cgagggcgac
     8101 cttccggcct actgggcgga cgccagcaaa gccgaccgtg aactgaactg gcgcgtaacg
     8161 cgcacactcg atgaaatggc gcaggacacc tggcactggc agtcacgcca tccacaggga
     8221 tatcccgatt aaggaacgac catgacgcaa tttaatcccg ttgatcatcc acatcgccgc
     8281 tacaacccgc tcaccgggca atggattctg gtttcaccgc accgcgctaa gcgcccctgg
     8341 cagggggcgc aggaaacgcc agccaaacag gtgttacctg cgcacgatcc agattgcttc
     8401 ctctgcgcag gtaatgtgcg ggtgacaggc gataaaaacc acgattacac cgggacttac
     8461 gttttcacta atgactttgc ggccttgatg tctgacacgc cagatgcgcc agaaagcaac
     8521 gatcctttga tgcgttgcca gagcgcgcac ggtaccagcc gggtgatctg cttttcaccg
     8581 gatcacagta aaacgttgcc agaactgagc gttgcggcat tgacggaaat cgtcaaaacc
     8641 tggcaggagc aaaccgcaga gctgggaaaa acgtacccgt gggtgcaggt ctttgaaaac
     8701 aaaggtgcgg cgatgggctg ctctaacccg catccgcacg gacagatttg ggcaaatagc
     8761 ttcctgccta acgaagctga gcgcgaagac cgcctgcaaa aagaatattt tgccgaacag
     8821 aaatcaccaa tgctggtgga ttatgttcag cgcgagctgg cagacggtag ccgtaccgtt
     8881 gtcgaaaccg aacactggtt agccgttgtg ccttactggg ctgcctggcc gttcgaaacg
     8941 ctactgctgc ccaaagccca cgttttgcgg atcaccgatt tgaccgacgc cctgcgcagc
     9001 gatttggcgc tggcgttgaa aaagctgacc agtcgttatg acaacctctt ccagtgctcc
     9061 ttcccctact ctatgggctg gcacggcgca ccatttaatg gcgaagagaa tcaacactgg
     9121 cagctgcacg cgcactttta tccgcctctg ctgcgctccg ccaccgtacg taaatttatg
     9181 gttggttatg aaatgctggc agagacccag cgagacctga ccgcagaaca ggcagcagag
     9241 cgtttgcgcg cagtcagcga tatccatttt cgcgaatccg gagtgtaaga aatgagtctg
     9301 aaagaaaaaa cacaatctct gtttgccaac gcatttggct accctgccac tcacaccatt
     9361 caggcgcctg gccgcgtgaa tttgattggt gaacacacgg actacaacga cggtttcgtt
     9421 ctgccctgcg cgattgatta tcaaaccgtg atcagctgtg caccacgcga tgaccgtaaa
     9481 gttcgcgtga tggcagccga ttatgaaaat cagctcgacg agttttccct caatgcgccc
     9541 attgtcgcgc atgaaaacta tcaatgggcg aactacgttc gtggcgtggt gaaacatctg
     9601 caactgcgta acaacagctt cggcggtgtg gacatggtga tcagcggcaa tgtgccgcag
     9661 ggtgccgggt taagttcttc cgcttcactg gaagtcgcgg tcggaaccgt attgcagcag
     9721 ctttatcatc tgccgctgga cggcgcacaa atcgcgctta acggtcagga agcagaaaac
     9781 cagtttgttg gctgtaactg cgggatcatg gatcagctaa tttccgcact cggcaagaaa
     9841 gatcattcct tgctgattga ctgtcgttca ctggggacca aagcagtttc catgccgaaa
     9901 ggtgtggctg tcgtcatcat caacagtaac ttcaaacgta ccctggttgg cagcgaatac
     9961 aacacccgtc gtgaacagtg cgaaaccggt gcgcgtttct tccagcagcc agccctgcgc
    10021 gatgtcacca ttgaagagtt caatgctgtt gcacatgagc tggacccaat cgtggcgaaa
    10081 cgcgtgcggc atatcctgac tgaaaacgcc cgcaccgttg aagctgccag cgcgctggag
    10141 cagggcgacc tgaaacgtat gggcgagttg atggcggagt ctcatgcctc tatgcgcgat
    10201 gatttcgaaa tcaccgtgcc gcaaattgac actctggtag aaatcgtcaa agctgtgatt
    10261 ggcgacaaag gtggcgtacg catgaccggc ggcggatttg gcggctgtat cgtcgcgttg
    10321 atcccggaag agctggtgcc tgccgtacag caagctgtcg ctgaacaata tgaagcaaaa
    10381 ataggtatta aagagacttt ttacgtttgt aaaccatcac aaggagcagg acagtgctga
    10441 acgaaactcc cgcactggca cccgatggtc agccgtaccg actgttaact ttgcgtaaca
    10501 acgcagggat ggtagtcacg ctgatggact ggggtgcgac tttactttca gcccgtattc
    10561 cgctttccga tggcagcgtc cgcgaggcgc tgctcggctg tgccagcccg gaatgctatc
    10621 aggatcaggc cgcgtttctg ggggcctcta ttggtcgtta tgccaaccgc atcgccaata
    10681 gccgttatac ctttgacggt gaaaccgtga ccctttcgcc aagtcagggc gttaaccagc
    10741 tgcacggcgg cccggaaggg ttcgacaaac gtcgctggca gattgtgaac cagaacgatc
    10801 gtcaggtgct gtttgccctg agttcagatg atggcgatca gggcttcccg ggtaatctcg
    10861 gcgcaacggt gcaatatcgt ctgaccgacg ataaccgtat ctccattact tatcgcgcca
    10921 cagttgataa accttgcccg gtgaatatga ctaatcacgt ctatttcaat cttgacggcg
    10981 agcagtctga cgtgcgcaat cacaagttgc agattctggc ggacgaatat ctgccggttg
    11041 atgaaggcgg cattccgcac gacggcctga aatctgtcgc cggaacgtct tttgatttcc
    11101 gcagcgccaa aatcatcgcc agtgagtttc ttgccgacga cgatcagcgc aaagtgaaag
    11161 gttacgatca cgcattcttg ttacaggcca aaggcgatgg caagaaagtg gcggcgcatg
    11221 tctggtcagc agatgaaaaa ttgcagctga aggtctacac caccgctccg gctctgcaat
    11281 tctactccgg caacttcctc ggcggcacac cgtcgcgggg aacagaacct tacgccgact
    11341 ggcaagggct ggcgttggaa agcgagtttc tgccggacag cccgaaccac cctgaatggc
    11401 cgcaaccgga ctgcttcctg cgtcctggcg aagagtattc cagcctgacg gaatatcagt
    11461 ttattgctga gtaatgttaa gccctcgtca tgagggcttt atctcatatt gttcaaatca
    11521 ccagcaaaca ccgacatatt tgcaactcaa tattcacaac aaccttacac tgcgccacta
    11581 ttttcgctat ggttatgcgt aagcattgct gttgcttcgt cgcggcaata taatgagaat
    11641 tattatcatt aaaagatgat ttgaggagta agtatatggc tgtaactaag ctggttctgg
    11701 ttcgtcatgg cgaaagtcag tggaacaaag aaaaccgttt caccggttgg tacgacgtgg
    11761 atctgtctga gaaaggcgta agcgaagcaa aagcagcagg taagctgctg aaagaggaag
    11821 gttacagctt tgactttgct tacacttctg tgctgaaacg cgctatccat accctgtgga
    11881 atgtgctgga cgaactggat caggcatggc tgcccgttga gaaatcctgg aaactgaacg
    11941 aacgtcacta cggtgcgttg cagggtctga acaaagcgga aactgctgaa aagtatggcg
    12001 acgagcaggt gaaacagtgg cgtcgtggtt ttgcagtgac tccgccggaa ctgactaaag
    12061 atgatgagcg ttatccgggt cacgatccgc gttacgcgaa actgagcgag aaagaactgc
    12121 cgctgacgga aagcctggcg ctgaccattg accgcgtgat cccttactgg aatgaaacta
    12181 ttctaccgcg tatgaagagc ggtgagcgcg taatcatcgc cgcacacggt aactccctgc
    12241 gtgcgctggt gaaatatctt gataacatga gcgaagaaga gattcttgag ctgaatatcc
    12301 cgactggcgt gccgctggtg tatgagttcg acgagaattt caaaccgctg aaacgctatt
    12361 atctgggtaa tgctgacgag atcgcagcga aagcagcggc ggttgcaaac cagggtaaag
    12421 cgaagtaaac gtcattcgtt taaaatgaga aagccgactg caagtgagtc ggcttttttg
    12481 ttgctaacaa tggagcacat tgcctgatgc gacgctgcgc gacttatcag gcctgtggtg
    12541 attcatcgga tacgccactc tgacggcgca tccgacaatt aaaccttacc cgcgacgcgc
    12601 ttttactgca ttcgccagtt gacgtaacag agcatcggta tcttcccagc cgatgcaggc
    12661 atcggtgatg ctcttaccgt aggccagcgg ctccccgctc tcgaggctct gattgccttc
    12721 caccagatgg ctttccacca tcacgccaat aatggccttt tcgccaccgg caatctgctg
    12781 gcaaacgtca gcacaaacat ccatctgctt tttgaattgt ttggacgagt tagcatggct
    12841 gaaatcgatc atcacctgtg ctggcaggcc tgctttgttc agcccttctt tcacttcagc
    12901 aacgtgcttc gcgctgtagt taggctcttt accgccgcgc agaatgatat ggcaatcgcc
    12961 gttaccgctg gtattcacaa tcgccgaatg cccccatttc gttacggaca ggaagcagtg
    13021 cggcgcaccg gcggcattaa tggcatcgat agccacttta atcgtaccgt cggtgccatt
    13081 tttgaagccg actggacaag aaagccctga tgccagttcg cggtgcacct gcgattcggt
    13141 ggtacgtgcg ccaattgcgc cccagctcat caggtcagcg agatattgtg gggtgatcat
    13201 atcgagaaac tcacccgccg ctggcagacc gctgtcgtta atatcaagca gcaatttacg
    13261 ggctatacga agaccgtcgt tgatctggaa gctgttatcc atatgcggat cgttaatcag
    13321 ccctttccag cccaccgtgg tacgcggctt ttcaaaatag acgcgcatta cgatttccag
    13381 ctcatctttc agctcttcac gcagcgccag caagcgagtg gcatactctt tagccgcgac
    13441 aggatcatga attgagcacg ggccaatcac caccaacagg cgatcatcat tacctttcag
    13501 gatcttatgg atcgcttttc gggcatgggc aaccgtattc gcggcatttt cagtagcggg
    13561 gaatttttcc agcaatgcga caggaggaag taactctttg atttctttga tgcgtaaatc
    13621 gtcgttctga taattcatgt ctgttccagt gttgccatac ttatcttagt gaatgcaata
    13681 cttccaatct atatcttccg tcagaatgtg taaacggagt tttacattat gaacggatta
    13741 atcctggaat tagcaagaaa aacgccagat tgtcgcgaaa aacgagatct ctcctacaat
    13801 ttctaactgt aactcctttg tttgttaatt atttcaagat tctctgctgc gtttcataaa
    13861 ctggctgaaa tcttaaacca atgccttata ttcacctgca aatgcactgt tggaagaggt
    13921 tatccgacat aacgaccata acaggagcat cctatgaaaa tgacaaaact ggccacatta
    13981 tttctgactg ccactctaag ccttgccagc ggtgccgcac tggctgccga tagcggagcg
    14041 caaactaata acggccaggc aaacgccgca actgatgcgg gccaggtagc ccctgacgcc
    14101 cgtgaaaatg tcgcgccaaa taacgtcgac aataacgggg taaataccgg ttctggcggc
    14161 acaatgctgc attcggatgg ttcttcaatg aacaatgacg gaatgaccaa agatgaagag
    14221 cacaagaaca ccatgtgcaa agatggtcga tgtccggata tcaataaaaa ggtacaaacc
    14281 ggtgatggca tcaataatga tgtcgatacc aaaaccgacg gtaccacgca gtaaccctgc
    14341 aaaatagcca ataatgggag agcggagtct ctccctttta atttttcact tctaaaagca
    14401 gtatgatgtc ataaagttaa gtgagaataa ttaagggatg actcgtcatg gcgcactcac
    14461 actcacacac gtcctcacac ctgccagaag ataataatgc tcgtcgcttg ttgtatgctt
    14521 tcggcgtgac tgccgggttt atgctggtag aagtcgttgg tggttttctt tctggttctc
    14581 tggcattgct ggccgatgcg ggtcatatgt tgaccgatac tgccgccctg cttttcgccc
    14641 tactcgccgt gcaattttca cgtcgtcctc ccaccattcg ccacactttc ggttggctaa
    14701 gactgaccac gctcgcggcg tttgtgaatg ccatcgccct cgtggtaatt accattttga
    14761 ttgtctggga ggcgatagaa cgcttccgca cgccgcgtcc ggtcgagggc ggcatgatga
    14821 tggcaattgc cgtggctggg ttgctggcaa atatactttc tttctggtta cttcatcacg
    14881 gcagcgaaga gaaaaacctc aacgtacgag cagcggcatt gcatgtgctc ggggacctgt
    14941 tgggttcggt tggggctatt attgccgcgt tgattattat ctggaccggc tggacacctg
    15001 ctgaccccat tctctcgata gtggtgtcgc ttctggttct gcgtagcgcg tggcgactgt
    15061 tgaaagatag cgtgaatgaa ttacttgaag gtgcaccggt atcgctggat atcgctgaac
    15121 tgaagcgtcg tatgtgccgg gaaatcccgg aagtccgcaa tgtgcaccat gtacatgtat
    15181 ggatggtagg tgagaagccg gtgatgacgc tgcatgtgca ggtgatcccg ccacacgatc
    15241 acgatgcctt gttggatcag atccaacact acctgatggc tcactatcag attgagcacg
    15301 ccaccattca gatggaatat caaccttgtc atgggccaga ctgccacctg aatgaagggg
    15361 tgtctggcca ttcacatcat caccattaat gggacagcgc gcatgagcct ctttcacgtg
    15421 cgctgttgat ccacatccga ctgccgttga gcgcaataaa ggtcaggatg atgtactcca
    15481 gagacatggc gtaaacgccc tgaagtgcaa aaataacgac gctaatcacg ttaataatca
    15541 cccacaacag ccagttttcc acatacttac gcgtcatcag aagcattgcc acgatagata
    15601 acaccatcat gcatgaatcc cagaacggga aagcgtccgg ttgcagttca ggcatcacaa
    15661 cctgtaatcc taatgcttgc atgatcatga ctgccacgcg ggtcaaaaat gcaaacaccg
    15721 gattgataaa taccgtcatc agaccaatcg aaacaacgca aaccgccaac cagctgagcg
    15781 ccttcggcaa tggtaaccag cgaattttca actccgcctc gttctgactg gtttgtcgcg
    15841 accacgcata ccaaccgtaa atattcgcgg caaagaaaaa cacctgtaat agcaggctgg
    15901 catacagctg aatctgaaag aaaataatgc caaacaaggt gacgttgatc aggccaaaga
    15961 agtagttgct gatcttctcc agactggcaa ggccaataca cagcaacccg gcgatcgtgc
    16021 ctaccgcttc gatccatgag agatcataac cgcctgctcc tattggtata tgtaccagga
    16081 tattctgcac actaaaaaaa tccatctttc ccccaaagcg taacgttacg ccttattatt
    16141 cgttatccac gtagtgtagc cgcaaaatcc agcatacgat tgagcggcac cagcgccctc
    16201 tctcgcagcc tttcatcaac atgaacctcg tgattgcttc cttcctgttc taatgcctct
    16261 gcgatggcct gaaggccatt catggccatc cacggacaat gcgcgcagct gcggcaggtt
    16321 gcaccctcac ctgcggttgg tgcttccagt aactctttat ctggcaccgc ctgctgcatt
    16381 ttgtagaaaa taccccgatc ggttgccaca ataagcctct gatgtggcaa tgttttcgca
    16441 gcagcgatca gttgactggt ggaaccgacc gcatccgcca tatcgacaat agcttgtggt
    16501 gattctggat gcaccagtat ggcagcatcc gggtattctt cttgcaagcg ggttaacgcc
    16561 tgagtcttaa attcatcatg cacaatacag gcaccctgcc agcatagaat gtctccaccc
    16621 gtctgttttt gcacgtaacg ccccagatgt ttgtcgggtg cccagatgat tttttcaccc
    16681 aaactatcaa gatgatcaat aagttcgacg gcaatgcttg aagttaccac ccaatctgcg
    16741 cgcactttta ccgcagcaga agtgttggcg tagacgacga cagtacgatc gggatgggca
    16801 tcgcaaaatg cgttaaattc ttcaacaggg cagccgagat ccagtgaaca ttcagcctga
    16861 agtgtcggca tcagaattgt tttttccgga ctgagaattt tggcggtttc tcccataaat
    16921 ctcaccccag cgactaacaa agtagaagcg ggatgctttg caccgaagcg cgccatttcc
    16981 agagaatcag aaatacagcc accggtttct tctgccagtt gttgaatttc gggatcggta
    17041 tagtagtggg caaccatcat cgcattacgt tcttttagca gacgttttat cttctcgcgg
    17101 taatacgctt tttcatcaat gcttaacggc gtcggcttcg gggggaaagg ataaatcgcc
    17161 gtgtctggat caaacattac gctcatctta ccatctcgtt ttacaggctt aacgttaaaa
    17221 ccgacattag cgtaatattc gctgttatcg gtgtaatttg ttttatatgc taaacaagat
    17281 agtcgaatgg tggggaaaag tcactcgaat tacgcctaat tccaccgacg tagagttgct
    17341 tgcacagtaa gctctgacga tgtcatcagg tttacaaagt aaaattgagg atgcctgaat
    17401 agcaaaaaag cgcctttagg gcgctttttt acattggtgg gtcgtgcagg attcgaacct
    17461 gcgaccaatt gattaaaagt caactgctct accaactgag ctaacgaccc atacgggtgt
    17521 tacctgaaag atttctactc ggggccaatc tttaagattg gtgtgtcgtg caggatgact
    17581 cgcttcgctt gccctacggg ccgttgctgg cgcaacgtta tccttcacgc ttaacatctg
    17641 agtttgatgt taaaattggt gggtcgtgca ggattcgaac ctgcgaccaa ttgattaaaa
    17701 gtcaactgct ctaccaactg agctaacgac ccgagtggtg ggtgatgacg ggatcgaacc
    17761 gccgaccccc tccttgtaag ggaggtgctc tcccagctga gctaatcacc cgatactgcg
    17821 ctggatacta caaactactt ccaccgaacc catcgtaatt agtggtgggt cgggcaggat
    17881 gactcgcttc gctcgcccta cgggccgttg ctgatgcaac gttatcctac acgcttgaca
    17941 tctgtcttcg atgctaaaac tggtgggtcg tgcaggattc gaacctgcga ccaattgatt
    18001 aaaagtcaac tgctctaccg actgagctaa cgacccgctg gtgggtgatg acgggatcga
    18061 accgccgacc ccctccttgt aagggaggtg ctctcccagc tgagctaatc acccaatact
    18121 acgctggata ctacaactaa ctatgttagt ggtgggtcgt gcaggattcg aacctgcgac
    18181 caattgatta aaagtcaact gctctaccaa ctgagctaac gacccacttt ttcgttgctt
    18241 tcggtttgtt tgatatcccg tggcaacggc ggcatatatt actgatttca gacttgagcg
    18301 caacaaaaat ttcgatgcag atcactcaac tgcttatgat tcgcacgaca cgaccagaaa
    18361 taatgcaact tctggtcgtg tgttatgcat tacatcgcgt tcagacgttt ttgtgcctgt
    18421 ttagcgccat cagtaccagg gtatttactg ataacctgct ggtatacggc tttcgctttt
    18481 gcggtgtcac ctttgtcctg catgatgacg ccgactttaa acatcgcatc agcagccttt
    18541 ggtgacttcg gatagttttt cactaccgaa gcaaaatagt acgccgcatc atctttttta
    18601 cccttgttgt agtttaactg acccagccaa taattggcgt ttggcaggta agttgaatca
    18661 gggtaatttt tgatgaaatt ctgaaatgcc accattgcgt catcctggcg ggatttatcc
    18721 tgcaccagcg caatagctgc attgtaatcc gtgtttgcat cgccgctttt caccggcgcg
    18781 ccagcattcg cagtaccagc atcagctgtc ggcgtcgttg atgccgccgc accgctttga
    18841 tcgctgctgg ttgattgcgc cgctgcacca ccgctgctga ggctgtcgat ctgcaacagg
    18901 atctgctttt gccgctccac gacctgattc agttgatact gattttcctg aatctgacca
    18961 cgcagggaat caatatcgga ttgattatca gaaagttgtt gctggagttg ggttaaaagc
    19021 tggctgtgag cattagaaat acgctcaagt tgagtgacgc ggtcttcgac cgagcctgag
    19081 ccgacactac tgattggtgc ctgagcaaaa gcggcccagg gggccgctat accaaccagt
    19141 aacgacagac tcaatagttg atgtctgaag ttactgctca tgcaattctc ttagtaaacc
    19201 agtaccgcac gacggttttt ggagtatgcc gcttcgtcat gacccagtac tgcaggtttt
    19261 tctttaccgt aagaaacgat ggagatctgg tctgcagaaa cgcctttacc ctgcaggtac
    19321 atcttaacgg cgttcgcacg acgttcaccc agggagatgt tgtattccgg agtaccacgt
    19381 tcgtccgcgt gaccttctac ggtgactttg taagacgggt tgctacgcag gaagtttgca
    19441 tgtgcatcca gcatttgagc gaagtcagaa cggatatcgt acttgtccag atcgaagtaa
    19501 acgatgttgt tctgctgcag ctgttgcatt tgcagacgag cctgctcttc ggaagacatg
    19561 ttgccgttgc cgccgttcgc atccatacca gtgccggcac ccagcatgcc ttcgctgccg
    19621 tcattgctgg cgttcttgtt ggaagaacat gccgcaattg ccataacagg cagagcaatc
    19681 atcagccctt tcagcacttt gttcagttgc atttcaatga ttcctttact attcaattaa
    19741 ttattatcac agatacggcg accaggcagg gaatttgacc tgtccatcag ttgccggaag
    19801 acgcgctttg aaacgcccat ctgtagaaac caaattcagc acggatccca tcccctgaga
    19861 agagctgtag attaccatag tgccattagg tgccagactt ggcgtttcat ccaggaacgt
    19921 ggacgacaga acttgtacgc ctcccgttgc cagatcttgt ttggcaatgt gctgctgccc
    19981 accattggag ctgaccatta ccataaattt accgtcgctg ctgacatccg catcctggtt
    20041 ctgcgaacct tcccaggtaa tacgttgtgg cgcaccgccg ttgatattca ctttataaac
    20101 ctgcggacga ccggcctggt cagaagtaaa tgccaggttc tggctatccg ggaaccaggt
    20161 cggttcggta ttgttactgc gaccatcagt cacctggcgg atctgaccag aagccaaatc
    20221 cattacgtac aggttcagac taccggtttt cgacaaggcg aatgccagtt tgctgccgtc
    20281 tggcgagaat gcaggtgcac cgttgtgacg cgggaatgaa gccacctgac gtacagcgcc
    20341 atttgccagc gtctgaataa ccagcgcgga acgaccgctt tcgaaggtca cataagccag
    20401 tttagaaccg tctggtgacc acgccggaga catcagcggc tgcggtgaac ggtgaacgac
    20461 aaactggttg taaccgtcat agtcagatac gcgcagttca tacgggaact gaccgccgtt
    20521 ggtctgaaca acgtaggcaa tacgggtacg gaacgcacct ttaatgccgg tcagtttttc
    20581 aaacacttca tcactggcgg tatgaccagc ataacgcagc cactgcttgt tcactttgta
    20641 cgagttctga gcaagtacag tacccggtgc gccgccagtg tcaacaagtt gataagcaac
    20701 attgtaagaa ccatccggat tcggagtgac ctgaccgaca actacagcgt caatgcccag
    20761 tgcggaccat gcagatggtt gtacttcctg cgcactaccc ggctgctgtg gcagacgagc
    20821 gcgatctaac ggattaaatt taccgctgtt acgcaagtca gcagcaacga tgccgccaat
    20881 atcttcaggt gccgcaccag gccccgccca ctggaaagga acaacaccaa taggacgacc
    20941 ggaatctaca ccgctgtcga tcacaatgcg gacttcagca tgcagaactg atgcccacag
    21001 tatgagaaaa ccaaatgcta ctcgtaatgc ctgcttcatc atatctccct tatctggacc
    21061 gatggcccac gataatttag cagaatgtta acaaactaaa atacacaaaa ctaccagaac
    21121 cccgtggcaa ccggtgcctg atgttgaccg tccgaacagt caacatcgcg attacggttt
    21181 gaagtccaat ggcgcgtttt tgaacacttc atatactgcc tggcttggtg gtttcgggat
    21241 cttcgcaagt ttagctgctg ccaacgcagc ctgacaaagt gcgggatcgc caccttcagg
    21301 tttgatatcc agtaacatac catcgggtgc cagttttatg cgcagcgtac aggttttgcc
    21361 tgcataggac gatgcgtcat agaacttact ttcgatagca gatttaatct gcccggcata
    21421 gttattgata tcggcccctg atgcgccatt gtttttagta ttaccactcc cggcaggcga
    21481 agcattgttc cctttcgccc ctccccccgt tttcggtgca ttcttaccag agcttagctc
    21541 accgaaaata tcatctgcct ctgcggcggc tttttctgcc gctgctttct tatcagctgc
    21601 tgccttttca gcagccgctt tttctgctgc ttttttatcg gctgcagctt tctctgctgc
    21661 cgctttcttc tcagcttctg ctttggcttt ttcagcagct tcagttgccg ctttctttct
    21721 tgcttcagct gcagctgctt ctgccgcttc cgctttcttc ttcagtgccg cagcggctgc
    21781 ctcggctttt ttctgcgctg cggctttggc ggcttctgct tctgcttttt tctttgcgtc
    21841 tgcagccgct ttcttcgctg cttcttccgc agctttagca tctgcttcgg ccttcgcttt
    21901 agcatctgct tcggccttcg ctttagcatc tgccgccgct ttcgctgccg cctcttcagc
    21961 ttgcttctgc tttaactcgg cctgttttgc agcttcttca gcctgctttt tctgctcctg
    22021 agccgctaac cgctctttct caagttgctt caggcgttcc tgttcagccg cttgtttctc
    22081 acgcagttct tcagcagcct gctgttcctt catcttgcgc tgttcatcag aacgcttcgc
    22141 gcttgattcc tggctttgca tgcgtttgta ctgctcaact accgcacctg aatcaaccat
    22201 gacagcgtcg atggacgaac caccgccacc tccggctgaa gcttctatat tctcatcgaa
    22261 cgaactccag atcagcgccg caaataagat gacatgcagc actgctgaaa taattatcgc
    22321 ccgcttgagc ttgtcgtttt gttcggttgc ctttgacact ctcggtttcc aaaaactgtt
    22381 cgcctgttac ccgctctctt tcaagcaagg gaaacgcaga tgtttagata ggctgcgtca
    22441 ttaaaccaac cgatttcaca cccgcactat gtaacaagtt cagtgcttta attatttcat
    22501 cgtaaggcac atcttttgcg ccaccgatca gaaagaccgt tttcgggttg gccttgaaac
    22561 ggctggacac ttccgccacc acctgctctg gtggtaaacg ctccaggcga tctttctcaa
    22621 ccaccacggt gtactgacca ataccagaca cttcaacaat cactggcgga ttatcgttac
    22681 tgctcaccgc ctgtgattca gtagcgtctg gcagatcgac ctccacgctc tgggtgatga
    22741 tgggcgctgt cgccatgaag atcagcaaca gcaccagcag tacgtccagc aacggtacaa
    22801 tgttgatttc ggacttaagt tcgcgacgac ctcgtccacg cgctctggcc atgacttacc
    22861 ccttattgct ctcgctaacg gtaaacgcct ggcggtgcag aatcgcggta aactcttcca
    22921 taaagttgtc gtaattcagt tccagtttgt ttacgcgctg gttgaggcgg ttgtaggcca
    22981 taactgccgg gatagcggca aacagaccaa ttgcagtcgc aatcaacgct tctgcgatac
    23041 cgggcgcaac catttgcagt gttgcttgtt ttaccgcccc gagggcgata aaggcgtgca
    23101 tgatccccca gaccgtacca aacagaccaa tatacgggct gatggagcca accgtaccga
    23161 ggaacggaat gtgcgtttcc agattttcaa gttcacggtt catggagata cgcatagcac
    23221 gcgacgcccc ttccactacg gcttccggcg catggctatt ggcacgatgc aggcgcacaa
    23281 actctttgaa cccgctgtaa aatatttgtt ccgaaccagt cagattatcc cgtttcccct
    23341 gactctcttg atagaggcga gagagttcga ttccagacca gaatttatct tcaaacgctt
    23401 cggcttcgcg cgccgctgcg ttaagaatac gggtccgctg gataataatg gcccaggatg
    23461 cgattgaaaa accaatcaaa atcaacatga taagtttaac cagaaggcta gccttcagga
    23521 acaaatcaag gatattcatg tcagtcactg cttaaactcc gcgacaatag acttgggaag
    23581 cgcacgaggc ttcattttga gtgggtcaac gcaaacaacc agaacctctg cttcattcag
    23641 caaagtattc tcggcgttga caatacgttg cgtgaaaacc aaagaggtgc cacgcattga
    23701 tgttatttca gtctgtattt cgagcatatc gtcgagccgc gcaggtgcgt aatattccac
    23761 cgtcatttta cgtaccacaa aggcaacgcg ttcagccatc agcgcctgct gactgaagtg
    23821 atgatgacgc agcatctctg tgcgtgctct ttcataaaaa gcgacgtaac tggcgtggta
    23881 caccacacca ccggcatcgg tatcttcata gtagacgcga accagccatc gaaacagcgt
    23941 tgtattcact ttacatcccg gtaatgcaac aaaagttaga gcttttaaac gctgctacta
    24001 tacgcgcgcg attgaggttt gggaatgagg gcaagttaag ggagcgtaaa aatttatggg
    24061 cctggagcgg cccataattt tttaaagaga attctgattt aaaagaagaa gaaaatcagc
    24121 ccgataatga gaacaatatc ggcaagcaat gggcaaaaaa tcccttgcca aagaaccttc
    24181 tgcggacgaa agcccacgcc gtgaatcaca ccagcacaga cggcccacat cagcaataaa
    24241 ccatgccaga tttccagttc actggtcttc gcggcaaaac gagatgggtc ccaaaacata
    24301 catcctgcta acagaagcgc catcacgaag gaaagcgccc gcagggggcg cttgtccatt
    24361 accgcataca aggtcgcgat aatcttactc atcagatgtc ttcttgaccg gctttgcctg
    24421 attcgacgtg ttcaagcgcc agcgcggtga ttaccccaaa cgaacaggca agaagcgttc
    24481 ccagaatcca tgcgaaatac cacattttta gctccttact tagtacagag agtgggtgtt
    24541 acgttcaata tcttctttgg tgatacgacc gaacattttc cagtaacacc aggcggtgta
    24601 gagcagaatg atcggtacca gaaccaccgc aacccaggtc atgacgttaa gcgtcagctg
    24661 gctggaagtt gcatcccaca ttgtcagact tgcgttcatc atggtgctgg acggcatcac
    24721 aaacgggaac attgcgatac cggctgtcag gatgatgcag gccagcgtca gggaggagaa
    24781 cacaaacgcc cacgcggctt tatccatacg tgcagtcagg atggtcagca gcggcagaac
    24841 cacacccagt gccggaatag cccacagaat tggcgtgttg ttgaagttaa ccagccatgc
    24901 gccagcttca cgaaccactt ctttattcag tgggttagag gctgcgtaat ggtccattgt
    24961 cgatttcacg acataaccat cgataccgta catcacccat acgccagcca gtgcgaaaca
    25021 gaccagtgtc accagcgcag ccacctgagc cgttgcacgg gtacgcaggt gcagttcacc
    25081 cacggtacgc atttgcagat aggttgcgcc ctgagtaatg atcatcccta cgctcaccac
    25141 gcctgccagc aggccgaacg ggttaagcaa ctggaagaag ttaccggtgt agtacagacg
    25201 cagatattca tcaacgttga acggtacgcc ctgcaacagg ttaccgaacg caacaccaat
    25261 taccagcggc ggaacgaagc taccaatgaa gatgccccag tcccacatgt tacgccagcg
    25321 ggtttcttca atcttggagc ggtagtcaaa accgaccgga cggaagaaca aagacgccag
    25381 cacgaggatc atcgccacat agaagccgga gaacgcagcg gcatagacca tcggccaggc
    25441 agcaaagagt gcgccgcccg cggtgatcag ccaaacctgg ttaccgtccc agtgtggtgc
    25501 aatggagtta atcataattc gacgctcggt gtcgttacga ccgaggaaac gggtgagcat
    25561 gcccaccccc atgtcgaaac cgtcagtgac tgcaaaacca atcagcagaa cgccaaccag
    25621 cagccaccag ataaaacgca atacttcata atcgatcatt tgacgactcc tgtcttagcg
    25681 tgccggctga gtagtcgtgg aagactgctc aaagtgatag cgaccggttt tcaggctgct
    25741 tgggccgagg cgtgcaaatt tgaacattaa gaacaattct gccaccagga acagggtata
    25801 caggccgcaa atcagcacca ttgagaagat gagatcgcct gcggtcagtg acgaattcgc
    25861 cacagctgtc ggcagcactt caccgatagc ccacggttgg cggccatatt cagccacgaa
    25921 ccagcccgct tctacagcaa tccacggcag cggaataccg tacagcgcgg cgcgcagcag
    25981 ccattttttc tcgccaatgc ggttgcggat gacactccag aaagagagcg cgatgattgc
    26041 cagcagcagg aagccacacg ccaccataat acggaacgcg aagtacagcg gcgctacacg
    26101 cggaatggag tctttggttg cctgttgaat ctgcgcttca gtcgcatcag ccacgtttgg
    26161 cgtatagcgt ttcagcagca gaccgtaacc gaggtctttc ttcatgctat tgaactggtc
    26221 acgaaccgcc tggtcggtag aaccagaacg cagttgttcg agcagagagt acgccttcat
    26281 cccgttacga atgcgttctt catgctgcac catcagctct ttcaggccga taaccggggt
    26341 atccacggaa cgcgttgcaa tgatgcccag tgcgtaaggg atctgaatcg caaatttgtt
    26401 cgtctcctct tcctgatcag gaatgccgaa cagagtaaag gcagcaggcg caggttgcgt
    26461 ttcccactcg gcttcaatag cagccagttt ggttttctgc acgtcgccca tttcgtagcc
    26521 ggattcatca cccagaacaa taacagacag aacagcagcc ataccgaagc tggcagcgat
    26581 agcaaaggag cgtttagcga aggcgaagtc acgacctttc agcatatacc atgcgctgat
    26641 accgaggatg aacatcgcgc cagtcacata accagacgct acagtgtgaa cgaatttcac
    26701 ctgagcaacc gggttaagca ccagctcgga gaagctcacc atctccatac gcatagtttc
    26761 aaagttgaaa tcggacgcga ttgggttttg catccagccg ttcgcaacca gaatccacag
    26821 tgcggacagg tttgaaccga gcgccaccag ccaggtgaca cacatatgct gaactttacc
    26881 cagacgatcc caaccgaaga agaacagacc tacaaaggtg gattcgagga agaaggccat
    26941 cagaccttcg attgccagcg gcgcaccgaa gatatcccct acatagtggg aatagtaaga
    27001 ccagttagtc ccgaactgga actccatggt cagaccggta gccacaccca gagcgaagtt
    27061 gataccaaac aacttgcccc agaacttggt catatcttta taaatctgtt tgccggagag
    27121 gacgtagacc gtttccataa tggccagcag gaacgccata ccgagcgtca gtggcacaaa
    27181 aaggaagtgg tacatcgcgg tcaaggcaaa ctgtaagcgc gacagttcga ctatatctaa
    27241 catcatgact ccttgctcat cgcatgaaga ctccgagagt gaaccccgtt agaaagggtc
    27301 acacgcatgc cccaatagaa atttgtttga acactttcat cataccatgt gaatgcacac
    27361 aaaaacggcg taaagaaagg ttgcaaacat gttaataaaa actcaaattg atcccacgta
    27421 tatattacgc cgcaaaatcc ttacaataaa caggtttttg ttgaagcaaa tttgcatttt
    27481 tcgacggtga tcaatttata gctaaattac cgcctttcag ccaatttgat cgagaacaat
    27541 ttatctcttt ttgatgccca tttccaagac ttatacattg ataaatatca attcctacaa
    27601 attatgttaa tcatgtttca ataaggtaac tttagtgaca tttatgttta aaatgtgtga
    27661 gttataaggc tgaaattagt ttcggttggc aattaaagat aaaaagagac gaagcaaaaa
    27721 cagcacggtt gaccttaatt ctttttttgg tcactggcta atacgacgca gagtttcagg
    27781 attactaata aaggcataaa tccacccccg ccgatgttaa catttaatta acttataatt
    27841 atattataat taactcaccc agggttatta ttttgttaaa aataaagcca catatacgtg
    27901 gcttgagagt gaagataaac gcaaaattac ctgatgcgct acgcttgcca gtgtctacat
    27961 catctctgca atatattgaa tttgcctgct tttgtagacc gaataaagcg ttcatgccgt
    28021 atccggcatg aacaaagcgc cctttgtcaa caatctggcc gcgcatatgt ggcttcggtt
    28081 tgattgctat tcaggcaagc cggtaactga acgtccgtga ctggccgggt aaaaaaggcc
    28141 ccgatagatt tgaaccttga ttttcctcgg tggtaatgtg ttcatccatc atcgtttctg
    28201 agcaagaaat cacctcgcga ctgaaagcaa cagtcgcatc acaggttgct gattcagccg
    28261 gattaaacag ccgtaaaatc acttcttgtc ggtcttcagc tttcttaagt gcgcttatca
    28321 ggcatcccac tgggggcatt ttcaacaaac tataactttc cggcacgttg aatccggctt
    28381 tgttgagctt catcgcatcc catgggattt tgttgtaaca ctgtactgga gtcagccatg
    28441 ctcgcgcctg ctgagctaca ccagcggcgg ttggcgtacc ggtataactc aataaactta
    28501 ggcgacaaga aagcagacca cgtagttgtg agtccgggac tggcatttta attcccgaag
    28561 gccgcccagg ccttaaaagc agatcttctt tgcccagtaa gcccacgcca cgcagcaacg
    28621 taatggcaaa ggttttcttc tcttcaccga tgacttcaaa ttcacgtaac ccttcgctaa
    28681 agacagccat gccgttacgc ccttcctgta aggcaacata gttgagcata ttccataccg
    28741 gaaccggcgc ttctttccag ccttcttgct gccagttgtt cattgcactg tcgttcacgg
    28801 ggcgcgttag cgaaccaaac tgcgtatctg ccagaacact gtcggtgtta aaaggtgtag
    28861 ggaccaggac acgaaggcga tgatcgtcag cctggttatc aaggttgata tccacatcaa
    28921 tacgcctgct gttatgacta agagtgacaa ccaacaccac ccctactctg ccagtggatt
    28981 gccgggcgct gcgttctgac aaattgagcg gcactgccat gtcatagcgg ataacagccc
    29041 tgctctgcca gacttcatga ataatatcgc attgcggttt cgcgttcgct gcggtaatta
    29101 cccactcttc ttttgcgggt gaatagtcat attcatcacc atcatcagag ctttcttcaa
    29161 t
//
LOCUS       DADMHC010000035        29135 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.035, whole genome shotgun sequence.
ACCESSION   DADMHC010000035 DADMHC010000000
VERSION     DADMHC010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29135)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29135)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29135
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.035"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..152
                     /locus_tag="JNZ57_001244"
     CDS             <1..152
                     /locus_tag="JNZ57_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2135 domain-containing protein"
                     /protein_id="HAY8827526.1"
                     /translation="YYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLV
                     KSFDW"
     gene            427..3276
                     /gene="rcsC"
                     /locus_tag="JNZ57_001245"
     CDS             427..3276
                     /gene="rcsC"
                     /locus_tag="JNZ57_001245"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416722.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     RcsC"
                     /protein_id="HAY8827527.1"
                     /translation="MKYLASFRTTLKASRYMFRALALVLWLLIAFSSVFYIVNALHQR
                     ESEIRQEFNLSSDQAQRFIQRTSDVMKELKYIAENRLSAENGVLSPRGRETQADVPAF
                     EPLFADSDCSAMSNTWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGL
                     RDMPVERDTALKALHERINKYRNAPQDDSGSNLYWISEGPRPGIGYFYALTPVYLANR
                     LQALLGVEQTIRMENFFLPGTLPMGVTILDENGHTLISLTGPESKIKGDPRWMQERSW
                     FGYTEGFRELVLKKNLPPSSLSIVYSVPVDKVRERIRMLILNAILLNVLAGAALFTLA
                     RMYERRIFIPAESDALRLEEHEQFNRKIVASAPVGICILRTADGVNILSNELAHTYLN
                     MLTHEDRQRLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSSRV
                     KMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLV
                     TAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLG
                     LYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKFTDTGCIVLHVRADGDYLSIRVRDT
                     GVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGS
                     QFTVRIPLYGAQYPQKKGVEGLSGKRCWLAVRNASLCQFLETSLQRSGIVVTTYEGQE
                     PTPEDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAPGEWVHSVAAPHELPALLARI
                     YLIEMESDDPANALPSTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTAND
                     GVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRC
                     LESGMDSCLSKPVTLDVIKQTLTVYAERVRKSRES"
     gene            complement(3362..4012)
                     /gene="rcsB"
                     /locus_tag="JNZ57_001246"
     CDS             complement(3362..4012)
                     /gene="rcsB"
                     /locus_tag="JNZ57_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator RcsB"
                     /protein_id="HAY8827528.1"
                     /translation="MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINN
                     LPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLD
                     IEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLR
                     LFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD"
     gene            complement(4029..6689)
                     /gene="rcsD"
                     /locus_tag="JNZ57_001247"
     CDS             complement(4029..6689)
                     /gene="rcsD"
                     /locus_tag="JNZ57_001247"
                     /EC_number="2.7.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase RcsD"
                     /protein_id="HAY8827529.1"
                     /translation="MRQKETTATTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNA
                     WLKDKSYQIVDITHAIQKRVNTWRYVTWQIYDNIAATTSPSSGEGFLKQDVYYLEKPR
                     RKTEALIFGSHDNSTLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLVLISTLPLK
                     DLTSGFKESTVSDIVDSRRAEMLQQANALDERESFSNMRRLAWQNGHYFTLRTTFNQP
                     GHLATVVAFDLPINDLIPPGMPLDSFRLEPDATATGDNDNEKEGTDSVSIHFNSTKIE
                     ISSALNSTDVRLVWQVPYGTLLLDTLQNILLPLLLNIGLLALALFGYTTFRHFSSRST
                     ESLPSTAVNNELRILRAINEEIVSLLPLGLLVHDQESNRTVISNKIADHLLPHLNLQN
                     ITTMAEQHQGIIQATINNELYEIRMFRSQVAPRTQIFIIRDQDREVLVNKKLKQAQRL
                     YEKNQQGRMTFMKNIGDALKEPAQSLAESAAKLNAPESKQLANQADVLVRLVDEIQLA
                     NMLADDSWKSETVLFSVQDLIDEVVPSVLPAIKRKGLQLLINNHLKAHDMRRGDRDAL
                     RRILLLLMQYAVTSTQLGKITLEVDQDESSEDRLTFRILDTGEGVSIHEMDNLHFPFI
                     NQPQNDRYGKADPLAFWLSDQLARKLGGHLNIKTRDGLGTRYSVHIKMLAADPEVEEE
                     EERLLDDVCVMVDVTSAEIRNIVTRQLENWGATCITPDERLISQDYDIFLTDNPSNLT
                     ASGLLLSDDESGVREIGPGQLCVNFNMSNAMQEAVLQLIEVQLAQEEVTESPLGGDEN
                     AQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPGKQLC
                     ETLEHLIREKDVPGIEKYISDIDSYVKSLL"
     gene            7428..8558
                     /gene="ompC"
                     /locus_tag="JNZ57_001248"
     CDS             7428..8558
                     /gene="ompC"
                     /locus_tag="JNZ57_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpC"
                     /protein_id="HAY8827530.1"
                     /translation="MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYF
                     SDNKSEDGDQTYVRLGFKGETQVTDQLTGYGQWEYQIQGNTSEDNKENSWTRVAFAGL
                     KFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNTDFFG
                     LVDGLNFAVQYQGKNGSVSGEGMTNNGRGALRQNGDGVGGSITYDYEGFGIGAAVSSS
                     KRTDDQNGSYISNGVVRNYIGTGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSL
                     GWANKAQNFEAVAQYQFDFGLRPSVAYLQSKGKNLGVINGRNYDDEDILKYVDVGATY
                     YFNKNMSTYVDYKINLLDDNQFTRDAGINTDNIVALGLVYQF"
     gene            8670..9725
                     /gene="apbE"
                     /locus_tag="JNZ57_001249"
     CDS             8670..9725
                     /gene="apbE"
                     /locus_tag="JNZ57_001249"
                     /EC_number="2.7.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase ApbE"
                     /protein_id="HAY8827531.1"
                     /translation="MEISFTRVALLAAALFFVGCDQKPQPAKTHATEVTVLEGKTMGT
                     FWRASIPGIDAKRSAELKEKIQTQLDADDQLLSTYKKDSALMRFNDSQSLSPWPVSEA
                     MAEIVTTSLRIGAKTDGAMDITVGPLVNLWGFGPEQQPVQIPSQEQIDEMKAKTGLQH
                     LTVINQSHQQYLQKDLPDLYVDLSTVGEGYAADHLARLMEQEGISRYLVSVGGALNSR
                     GMNGEGLPWRVAIQKPTDKENAVQAVVDINGHGISTSGSYRNYYELDGKRLSHVIDPQ
                     TGRPIEHNLVSVTVIAPTALEADAWDTGLMVLGPEKAKEVVRREGLAVYMITKEGDSF
                     KTWMSPQFKSFLVSEKN"
     gene            9799..10863
                     /gene="ada"
                     /locus_tag="JNZ57_001250"
     CDS             9799..10863
                     /gene="ada"
                     /locus_tag="JNZ57_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-binding transcriptional
                     regulator/O6-methylguanine-DNA methyltransferase Ada"
                     /protein_id="HAY8827532.1"
                     /translation="MKNATCLTDDQRWQSVLARDPNADGEFVFAVRTTGIFCRPSCRA
                     RHALRENVSFYANASEALAAGFRPCKRCQPDKANAQQHRLDKITHACRLLEQETPVTL
                     EALADQVAMSPFHLHRLFKATTGMTPKAWQQAWRARRLRESLAKGESVTTSILNAGFP
                     DSSSYYRKADETLGMTAKQFRHGGENLAVRYALADCALGRCLVAESERGICAILLGDD
                     DATLISELQQMFPAADNAPADLTFQQHVREVIASLNQRDTPLTLPLDIRGTAFQQQVW
                     QALRTIPCGETVSYQQLANAIGKPKAVRAVASACAANKLAIVIPCHRVVRGDGTLSGY
                     RWGVSRKAQLLRREAENEER"
     gene            10863..11513
                     /gene="alkB"
                     /locus_tag="JNZ57_001251"
     CDS             10863..11513
                     /gene="alkB"
                     /locus_tag="JNZ57_001251"
                     /EC_number="1.14.11.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA oxidative demethylase AlkB"
                     /protein_id="HAY8827533.1"
                     /translation="MLDLFADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDVASQS
                     PFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHDLCQR
                     AATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLK
                     RNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTTDCRYNLTFRQAGKKE"
     gene            11589..13232
                     /gene="yojI"
                     /locus_tag="JNZ57_001252"
     CDS             11589..13232
                     /gene="yojI"
                     /locus_tag="JNZ57_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin J25 efflux ABC transporter YojI"
                     /protein_id="HAY8827534.1"
                     /translation="MELLVLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIEMA
                     DTSLLVLPEFLGLLLLLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQL
                     GSASLLAGLTSDVRNITIAFVRLPELVQGIILTIGSAAYLWMLSGKMLLVTAIWMAIT
                     IWGGFVLVARVYKHMATLRETEDKLYTDFQTVLEGRKELTLNRERAEYVFNNLYIPDA
                     QEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFWMANSLGWADTNVAATYSLTLLFLR
                     TPLLSAVGALPTLLTAQVAFNKLNKFALAPFKAEFPRPQAFPNWQTLELRNVTFSYQD
                     NAFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSGEQP
                     EDYRKLFSAVFTDVWLFDQLLGPEGKPANPQLVEKWLAQLKMAHKLELSNGRIVNLKL
                     SKGQKKRVALLLALAEERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISH
                     DDHYFIHADRLLEMRNGQLSELTGEERDAASRDAVARTA"
     gene            13450..15096
                     /gene="mqo"
                     /locus_tag="JNZ57_001253"
     CDS             13450..15096
                     /gene="mqo"
                     /locus_tag="JNZ57_001253"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase (quinone)"
                     /protein_id="HAY8827535.1"
                     /translation="MKKVTAMLFSMAVGLNAVSMAAKAKASEEQETDVLLIGGGIMSA
                     TLGTYLRELEPEWSMTMLERLEGVAQESSNGWNNAGTGHSALMELNYTPQNADGSISI
                     EKAVAINEAFQISRQFWAHQVERGVLRTPRSFINTVPHMSFVWGEDNVNFLRARYAAL
                     QQSSLFRGMRYSEDHAQIKEWAPLVMEGRDPQQKVAATRTEIGTDVNYGEITRQLIAS
                     LQKKSNFSLQLSSEVRALKRNDDNTWTVTVADLKNGTAQNIRAKFVFIGAGGAALKLL
                     QESGIPEAKDYAGFPVGGQFLVSENPDVVNHHLAKVYGKASVGAPPMSVPHIDTRVLD
                     GKRVVLFGPFATFSTKFLKNGSLWDLMSSTTTSNVMPMMHVGLDNFDLVKYLVSQVML
                     SEEDRFEALKEYYPQAKKEDWRLWQAGQRVQIIKRDADKGGVLRLGTEVVSDQQGTIA
                     ALLGASPGASTAAPIMLDLLEKVFGDRVSSPQWQATLKAIVPSYGRKLNGDVAATERE
                     LQYTSEVLGLKYDKPQAADSTPKPQLKPQPVQKEVADIAL"
     gene            complement(15246..15734)
                     /gene="eco"
                     /locus_tag="JNZ57_001254"
     CDS             complement(15246..15734)
                     /gene="eco"
                     /locus_tag="JNZ57_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease inhibitor ecotin"
                     /protein_id="HAY8827536.1"
                     /translation="MKTILPAVLFAAFATTSAWAAESVQPLEKIAPYPQAEKGMKRQV
                     IQLTPQEDESTLKVELLIGQTLEVDCNLHRLGGKLESKTLEGWGYDYYVFDKVSSPVS
                     TMMACPDGKKEKKFVTAYLGDAGMLRYNSKLPIVVYTPDNVDVKYRVWKAEEKIDNAE
                     VR"
     gene            complement(15869..16033)
                     /locus_tag="JNZ57_001255"
     CDS             complement(15869..16033)
                     /locus_tag="JNZ57_001255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827537.1"
                     /translation="MHTPIGVKPVAGSKEWREAWQKRAFAHISNGYKHIYIAINSPEI
                     FLLVCSLIRI"
     gene            16142..16636
                     /gene="napF"
                     /locus_tag="JNZ57_001256"
     CDS             16142..16636
                     /gene="napF"
                     /locus_tag="JNZ57_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapF"
                     /protein_id="HAY8827538.1"
                     /translation="MKIDASRRGILTGRWRKASNGIRPPWSGDESHFLTHCTRCDACI
                     NACENNILQRGAGGYPSVNFKNNECSFCYACAQACPESLFSLRHTRAWDLQFTIGDAC
                     LAYQSVECRRCQDSCEPMAIIFRPTLSGIYQPQLNSQLCNGCGACAASCPVSAITAEY
                     LHAH"
     gene            16626..16889
                     /gene="napD"
                     /locus_tag="JNZ57_001257"
     CDS             16626..16889
                     /gene="napD"
                     /locus_tag="JNZ57_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HAY8827539.1"
                     /translation="MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQL
                     IVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP"
     gene            16886..19372
                     /gene="napA"
                     /locus_tag="JNZ57_001258"
     CDS             16886..19372
                     /gene="napA"
                     /locus_tag="JNZ57_001258"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic nitrate reductase subunit alpha"
                     /protein_id="HAY8827540.1"
                     /translation="MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKA
                     PCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPLL
                     RMKNGKYDKEGEFTLITWDQAFDVMEEKFKTALKEKGPESIGMFGSGQWTIWEGYAAS
                     KLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGANMAE
                     MHPILWSRITNRRLSNQNVTVAVLSTYQHRSFELADNGIIFTPQSDLVILNYIANYII
                     QNNAINQDFFSKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFEDYKAFVA
                     EYTLEKTAEMTGVPKDQLEQLAQLYADPNKKVISYWTMGFNQHTRGVWANNLVYNLHL
                     LTGKISQPGCGPFSLTGQPSACGTAREVGTFAHRLPADMVVTNEKHRDICEKKWNIPS
                     GTIPAKIGLHAVAQDRALKDGKLNVYWTMCTNNMQAGPNINEERMPGWRDPRNFIIVS
                     DPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKSDLWQLVQFS
                     RRFKTEEVWPEDLLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLNDESRELGFY
                     LQKGLFEEYAWFGRGHGHDLAPFDDYHKARGLRWPVVNGKETQWRYSEGNDPYVKAGE
                     GYKFYGKPDGKAVIFALPFEPAAEAPDEEYDLWLSTGRVLEHWHTGSMTRRVPELHRA
                     FPEAVLFIHPLDAKARDLRRGDKVKVVSRRGEVISIVETRGRNRPPQGLVYMPFFDAA
                     QLVNKLTLDATDPLSKETDFKKCAVKLEKV"
     gene            19379..20074
                     /gene="napG"
                     /locus_tag="JNZ57_001259"
     CDS             19379..20074
                     /gene="napG"
                     /locus_tag="JNZ57_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HAY8827541.1"
                     /translation="MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGV
                     RLRPPGAINENAFASACVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMC
                     EDIPCAKVCPSGALDREIESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEA
                     ITLELERNTRTGKHARFLPTVHRDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHH
                     YRFGWLEGNNGKS"
     gene            20061..20924
                     /gene="napH"
                     /locus_tag="JNZ57_001260"
     CDS             20061..20924
                     /gene="napH"
                     /locus_tag="JNZ57_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HAY8827542.1"
                     /translation="MANRKRDAGREALEKKGWWRSHRWLVLRRLCQFFVLGMFLSGPW
                     FGVWILHGNYSSSLLFDTVPLTDPLMTLQSLASGHLPATVALTGAVIITVLYALAGKR
                     LFCSWVCPLNPITDLANWLRRRFDLNQSATIPRHIRYVLLVVILLGSALTGTLIWEWI
                     NPVSLMGRSLVMGFGSGALLILALFLFDLLVVEHGWCGHICPVGALYGVLGSKGVITV
                     AATDRQKCNRCMDCFHVCPEPRVLRAPVLDEQSPVQVTSRDCMTCGRCVDVCSEDVFT
                     ITTRWSSGAKS"
     gene            20921..21370
                     /gene="napB"
                     /locus_tag="JNZ57_001261"
     CDS             20921..21370
                     /gene="napB"
                     /locus_tag="JNZ57_001261"
                     /EC_number="1.9.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311119.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HAY8827543.1"
                     /translation="MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQE
                     GAIRMPKEQERMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISP
                     THFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK"
     gene            21380..21982
                     /gene="napC"
                     /locus_tag="JNZ57_001262"
     CDS             21380..21982
                     /gene="napC"
                     /locus_tag="JNZ57_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type protein NapC"
                     /protein_id="HAY8827544.1"
                     /translation="MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGF
                     NTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIR
                     KLKASKELYGKIFGVIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDTTA
                     QKSVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMREVEPGF"
     gene            22001..22618
                     /gene="ccmA"
                     /locus_tag="JNZ57_001263"
     CDS             22001..22618
                     /gene="ccmA"
                     /locus_tag="JNZ57_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis heme-transporting ATPase
                     CcmA"
                     /protein_id="HAY8827545.1"
                     /translation="MLEARELLCERDERTLFSGLSFTLNAGEWVQITGSNGAGKTTLL
                     RLLTGLSRPDAGEVLWQGQPLHQVRDSYHQNLLWIGHQPGIKTRLTALENLHFYHRDG
                     DTAQCLEALAQAGLAGFEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVN
                     GVDRLTQRMAQHTEQGGIVILTTHQPLNVAESKIRRISLTQTRAA"
     gene            22615..23277
                     /gene="ccmB"
                     /locus_tag="JNZ57_001264"
     CDS             22615..23277
                     /gene="ccmB"
                     /locus_tag="JNZ57_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HAY8827546.1"
                     /translation="MMFWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQ
                     LLARIAPGIIWVAALLSSLLALERLFRDDLQDGSLEQLMLLPLPLPAVVLAKVMAHWM
                     VTGLPLLILSPLVAMLLGMDVYGWQVMALTLLLGTPTLGFLGAPGVALTVGLKRGGVL
                     LSILVLPLTIPLLIFATAAMDAASMHLPVDGYLAILGALLAGTATLSPFATAAALRIS
                     IQ"
     gene            23319..24056
                     /gene="ccmC"
                     /locus_tag="JNZ57_001265"
     CDS             23319..24056
                     /gene="ccmC"
                     /locus_tag="JNZ57_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmC"
                     /protein_id="HAY8827547.1"
                     /translation="MWKTLHQLAIPPRLYQICGWFIPWLAIASVVVLTVGWIWGFGFA
                     PADYQQGNSYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIGAV
                     FTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYVGVIALWHAFDDRRLAGRAAG
                     ILVLIGVVNLPIIHYSVEWWNTLHQGSTRMQQSIDPAMRSPLRWSIFGFLLLSATLTL
                     MRMRNLILLMEKRRPWVSELILKRGRK"
     gene            24053..24262
                     /gene="ccmD"
                     /locus_tag="JNZ57_001266"
     CDS             24053..24262
                     /gene="ccmD"
                     /locus_tag="JNZ57_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HAY8827548.1"
                     /translation="MTPAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHR
                     AILCGVEQQRAREARLRAAQQQEAA"
     gene            24259..24738
                     /gene="ccmE"
                     /locus_tag="JNZ57_001267"
     CDS             24259..24738
                     /gene="ccmE"
                     /locus_tag="JNZ57_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HAY8827549.1"
                     /translation="MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEIL
                     YGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDL
                     FREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS"
     gene            24735..26678
                     /locus_tag="JNZ57_001268"
     CDS             24735..26678
                     /locus_tag="JNZ57_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HAY8827550.1"
                     /translation="MMPEIGNGLLCLALGIALLLSVYPLWGVARGDARMMASSRLFAW
                     LLFMSVAGAFLVLVNAFVVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLL
                     MSGWTFAVAIFSQRIPLDIVARVLAIMGMVSVGFLLFILFTSNPFSRTLPNFPIEGRD
                     LNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIASLLSGRLDSTYARFTRPWTLAAWIF
                     LTLGIVLGSAWAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWT
                     LLLAISAFSLCLLGTFLVRSGVLVSVHAFASDSARGMFILAFMVLVIGGSLLLFAARG
                     HKVRSRVNNALWSRESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFN
                     TMFTWLMVPFALLLGVGPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVA
                     MTVLGLAMACWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYS
                     VERDVRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKPETVLYAEKRY
                     YNTAGSMMTEAAIDGGITRDLYAALGEELENGAWAVRLYYKPFVRWIWAGGLMMALGG
                     LLCLFDPRYRKRVSPQKTAPEAV"
     gene            26675..27232
                     /gene="dsbE"
                     /locus_tag="JNZ57_001269"
     CDS             26675..27232
                     /gene="dsbE"
                     /locus_tag="JNZ57_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbE"
                     /protein_id="HAY8827551.1"
                     /translation="MKRKVLLIPLIIFLAIAAALLWQLARNAEGDDPTNLESALIGKP
                     VPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVG
                     MNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHA
                     GDLNPRVWEEEIKPLWEKYSKEAAQ"
     gene            27229..28281
                     /locus_tag="JNZ57_001270"
     CDS             27229..28281
                     /locus_tag="JNZ57_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HAY8827552.1"
                     /translation="MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCP
                     KCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTPLTV
                     LLWVLPVVAIGIGGWVIYARSRRRVRVVPDAFPEQSVPEGKRAGYIVYLPGIVVALIV
                     AGVSYYQTGNYQQVKIWQQATAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKN
                     PGDIEGWIMLGRVGMALGNASIATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNR
                     LGGELLRQLVRTDHSNIRVLSMYAFNAFEQQRFGEAVAAWEMMLKLLSANDTRRAVIE
                     RSIAQAMQHLSPQESK"
     gene            complement(28316..28963)
                     /gene="narP"
                     /locus_tag="JNZ57_001271"
     CDS             complement(28316..28963)
                     /gene="narP"
                     /locus_tag="JNZ57_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite response regulator protein NarP"
                     /protein_id="HAY8827553.1"
                     /translation="MPEATPFQVMIVDDHPLMRRGVRQLLELDPGFEVVAEAGDGASA
                     IDLANRLDIDVILLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAG
                     ADGYLLKDSDPEVLLEAIRAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELD
                     VLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ"
BASE COUNT         6651 a         7197 c         8076 g         7211 t
ORIGIN      
        1 actactatgg tgggcgcagc gaaacggaat taaccaccgc ccaactgacg ctgatcaccg
       61 atgaaggatc ggtcaatgag aaacaggaaa catttattgt accgatgcgt aatgctggcg
      121 agctgacgct ggtgaaaagt tttgactggt gatccatccc ttcacacaac ctggctctct
      181 cttttttcag ataagactgc tgggcgatct gccgacgcca ggatataacc attaacaagc
      241 gtcggcagat tggtcatttc ttatttttcg tactgagaac tgtccatcta ctccggcttt
      301 cctggttaag gcaatggttt ctaagcgata cgcattattg caataatgac agaacattgc
      361 ggtaacacgc ttttaccgct accttaacca cactccatcg gtcacctgag gcggagcttc
      421 gcccctttga aataccttgc ttcttttcgt acaaccctga aagcctcgcg ctacatgttc
      481 agagcattgg cgttagtgct ctggctgttg attgcttttt catccgtttt ttacatcgtt
      541 aatgcgttac atcagcgaga atcggaaatt cgtcaggaat ttaatctgag ttccgatcag
      601 gctcagcgct ttattcaacg cacctctgat gtgatgaaag agctgaagta catcgccgaa
      661 aatcgcttat cggcagaaaa cggtgtgctt tccccgcgtg gacgagaaac gcaggcggat
      721 gtgcctgcgt ttgaaccgct gtttgccgac tccgattgtt ccgcaatgag taacacctgg
      781 cgaggttctc tggagtcatt ggcgtggttt atgcgctact ggcgcgataa tttttctgcg
      841 gcttacgatc taaaccgggt atttttaatc ggcagcgata acctctgcat ggccaatttc
      901 ggtctgcgtg atatgccagt ggaacgcgat accgcgttga aagctttgca tgaacgcatc
      961 aataaatatc gaaatgcacc acaagatgat agcggcagta acctctactg gatcagcgaa
     1021 ggtccgcgcc ctggcatcgg gtatttttac gcgttgacgc cagtttatct ggcgaaccgg
     1081 ttgcaggcgc ttttgggggt cgagcagacc atccggatgg agaacttttt cttaccgggt
     1141 acgttgccga tgggggttac cattcttgat gaaaatggtc ataccctgat ttcgcttacc
     1201 ggaccagaaa gtaaaattaa gggcgatcct cgctggatgc aggaacgctc ctggtttggc
     1261 tatacggaag ggttccggga gctggtgctg aagaaaaatc tgccaccctc atcgctaagc
     1321 atcgtgtatt cggtgccggt tgataaggtg cgggaacgca ttcgcatgtt gatccttaac
     1381 gcaattttgc tgaatgtgct tgccggagct gcattgttta ctctcgcacg gatgtacgag
     1441 cgacgtattt tcattccggc ggaaagcgac gccctgcgac tggaagaaca tgagcagttc
     1501 aatcgcaaga ttgtcgcctc cgcgccagtg ggtatctgca ttttgcgtac cgctgatggc
     1561 gtcaatattt taagtaacga actggcgcat acctatctca atatgcttac gcatgaggac
     1621 cgccaacgac tgacgcaaat tatctgtggg cagcaggtca attttgttga tgtcctgacc
     1681 agcaacaata ccaatctgca aatcagcttc gtccattcgc gctatcgtaa tgaaaacgtg
     1741 gccatttgtg tgctggtgga tgtttcttcg cgcgtgaaga tggaagagtc gttgcaggag
     1801 atggcacaag cagcggaaca ggcgagccag tcaaaatcga tgttccttgc caccgtcagt
     1861 catgagctgc gaacgccgct gtatggcatt atcggtaacc tggatctgtt gcaaaccaaa
     1921 gagttaccga aaggcgtcga tcggctggtg acggcaatga acaactcttc cagcctgttg
     1981 ttgaaaatta tcagcgatat tctcgatttc tcgaagattg aatcggaaca gttgaagatc
     2041 gaaccgcgtg agttttcacc gcgtgaagtg atgaaccaca tcaccgccaa ctatttaccg
     2101 ctggtggtac gcaagcagtt aggcttgtac tgctttattg aaccggatgt gccagtggcc
     2161 ttaaatggcg acccgatgcg tttacagcag gtcatctcca acctgttgag taacgccata
     2221 aaattcaccg ataccggctg tatagttttg catgtccgcg ctgatggcga ttatctctct
     2281 atccgtgttc gcgataccgg cgtggggatt ccggcgaaag aagtggtgcg cttgtttgat
     2341 cccttcttcc aggtcggaac gggcgtacag cgaaacttcc aggggaccgg tctgggtctg
     2401 gcgatttgtg aaaaactgat cagcatgatg gacggcgata tctcggtaga ttcagaaccg
     2461 ggaatgggca gccagtttac cgtgcgtatt ccgttgtacg gcgctcagta cccgcagaaa
     2521 aaaggcgtgg aagggttgag tggtaaacgc tgctggctgg cggtccgcaa tgcgtcgctc
     2581 tgtcagttcc tggaaactag tttgcagcgc agcggcatcg tcgttacaac atacgaaggg
     2641 caggaaccga ctcccgaaga tgtgttaatt actgacgagg tagtgagtaa aaaatggcag
     2701 ggtagagcgg tagtgacctt ctgtcgtcgc catattggta ttccgctgga gaaagcgcca
     2761 ggggagtggg tacacagtgt ggctgccccg catgagctac cggcattgtt ggcgcgtatt
     2821 tatttgatcg agatggagag cgacgatcct gctaacgctc tgccgtcgac ggacaaagcg
     2881 gtcagcgata atgacgatat gatgattctg gtcgtggatg atcatccgat taaccgacgt
     2941 ctgctggcag atcagttggg atcgttgggc tatcaatgta aaaccgcgaa tgatggtgtc
     3001 gatgcgctta atgtacttag caagaatcat attgatatcg tgcttagcga cgtcaacatg
     3061 ccaaatatgg atggttaccg cttgacgcaa cgcattcgtc agttgggact gacgttgccg
     3121 gtaatcggag taactgctaa tgcgttggct gaagagaagc agcggtgtct ggagtccggt
     3181 atggacagct gcctgtcgaa gccggtaacg ctggatgtga taaaacagac gctgacggta
     3241 tatgccgaga gggtcaggaa atcgcgggaa tcgtaggacg gataaggtgt ttatgtcgca
     3301 tctggcattc agtgcaaatg ccagatgcga cgctgacgcg tcttatctgg cctacaggtg
     3361 attagtcttt atctgccgga cttaacgtca ctgaagagag ataattcagc agggcgatat
     3421 cgttctcgac acccagcttc atcatcgcag atttcttctg gctactgatg gttttaatac
     3481 tgcggttcag ctttttagcg atctcggtca ccaagaagcc ttccgcaaac aggcgcagaa
     3541 cttcactctc ttttggcgag agacgcttgt caccgtaacc accagcactg attttttcca
     3601 acaggcgaga aacgctttcc ggggtaaatt tcttcccttt ctgcagcgcg gcgagagctt
     3661 tcggcagatc ggtcggtgca ccttgtttca gcacgatccc ttcgatatcc agatccaata
     3721 ccgcactaag aatcgccggg ttgttgttca tagtcagaac aatgatcgac aggcttggga
     3781 aatggcgctt gatgtacttg attaaggtaa tgccatcgcc gtacttatcg ccaggcatgg
     3841 agagatcggt aatcaacaca tgcgcatcca gtttcggcag gttgttgatc agtgctgtag
     3901 agtcttcaaa ttcgccgaca acattcaccc actcaatttg ctcaagtgat ttgcgaatac
     3961 cgaacaagac tatcggatgg tcatcggcaa taattacgtt catattgttc atgtaatagg
     4021 ctaccttgct acagcaagct cttgacataa ctgtcaatgt cgctgatgta tttttctatt
     4081 cctggaacat ccttctcacg aatcagatgt tccagcgttt cacataactg cttgccgggt
     4141 accagattta gcatggcaaa tacgccttta agacgatgag ccgtttgggc taacgcagca
     4201 aagtcactgg ttgctgcttc agtatacagc ctcttaacat catccggtac tgtgtctaca
     4261 aagagcgcat aatagccgct ggcatggagt tgcgcatttt catctccgcc cagaggcgat
     4321 tctgtcacct cttcctgcgc cagttgcact tcaattaatt gtaagaccgc ttcctgcata
     4381 gcgttgctca tattgaagtt gacgcacaat tgaccaggcc caatttctcg tacgccagac
     4441 tcatcatcgc ttaaaagcaa gccagaggca gtaagattag acggattatc cgttaaaaag
     4501 atatcataat cttgactaat taatctttca tcgggtgtga tacaggttgc accccaattt
     4561 tctaactggc gagtgacaat attccgaatt tctgccgaag taacatccac cattacgcag
     4621 acatcatcca gtaaacgctc ttcttcctct tcaacttccg ggtcagcggc gagcattttg
     4681 atatgcacag agtagcgtgt accaagccca tcccgcgttt tgatgtttaa atgaccgccc
     4741 agtttacgcg ccagttgatc gctcagccag aatgccagcg ggtccgcctt gccatagcga
     4801 tcgttttggg gctggttgat aaacgggaag tgcaaattat ccatttcatg aatacttacg
     4861 ccttctcccg tgtccagaat gcggaatgtc aggcggtctt cagaggactc atcctgatca
     4921 acctcaaggg tgatttttcc caattgcgtt gaggtcacgg catattgcat cagtagcagc
     4981 aaaatacgtc gtaaggcatc gcgatcgccg cggcgcatat cgtgtgcttt cagatgattg
     5041 ttaatcagca gttgcagacc tttacgcttg atggcaggca acactgaagg cacaacttca
     5101 tcaattaaat cctgcacgga gaacagcacc gtctcacttt tccagctatc gtccgcaagc
     5161 atgttcgcta actgtatttc atcgaccagc cgcaccagca catctgcctg attcgccagt
     5221 tgtttgcttt ccggggcgtt gagtttagcc gcgctctccg ccagggactg tgcgggttct
     5281 ttcagcgcat cgccaatgtt tttcataaag gtcatccgcc cctgctggtt tttctcatac
     5341 agacgctgcg cctgcttgag tttcttgttt accagcactt cgcgatcctg atcgcgaata
     5401 atgaaaattt gtgtgcgcgg cgcgacctgg ctgcggaaca tgcggatctc atacagctcg
     5461 ttattgatcg tcgcctgaat aatcccctga tgctgttccg ccatggtggt gatgttttgc
     5521 agattcaaat gcggcagcaa atgatcggca attttgttac ttatgacagt gcggttcgat
     5581 tcctgatcgt gaaccagcag gccgagcggc agcagtgaga ctatctcttc attaattgcc
     5641 cgtaaaatgc gcaattcgtt attgaccgcc gtgctgggta gactttctgt actgcggctg
     5701 gagaaatggc ggaatgtggt atagccaaat aacgccagcg ccagcaaacc gatgttcagc
     5761 agcagtggca gcagaatgtt ttgcaacgta tccagcaata aggtgccata aggaacctgc
     5821 cagaccaggc gcacatcggt agagttgagt gccgaggaga tttcaatctt cgtactgtta
     5881 aagtggatac tgacgctatc cgtcccttct ttctcattat cattgtctcc cgttgccgtc
     5941 gcgtctggct caaggcggaa actgtccagc ggcatacccg gtgggatcaa atcattaatc
     6001 ggtagatcaa aagctacgac cgttgccaga tgtcccggct ggttgaacgt ggtacgcaag
     6061 gtaaagtaat gaccgttctg ccaggccagg cggcgcatgt tagaaaaact ttcgcgttca
     6121 tcgagggcgt tggcctgttg caacatctct gcacgacgtg aatcaacaat gtcgctgacg
     6181 gtcgattctt taaatccgga ggtgagatct ttgaggggca gggttgagat cagcaccaga
     6241 ctgttatcct gaccattcag gtaatacatc gaccacggta cattttctgc gccccacaat
     6301 gtgtccagat aggtggacat ccgctgagtc atctcaagcg ttgagttgtc gtgagagcca
     6361 aagattaacg cttccgtttt gcggcgcggt ttctccagat agtagacatc ctgtttcagg
     6421 aaaccttcgc cggaggaggg ggaggtcgtc gcggcaatgt tgtcgtagat ctgccaggtc
     6481 acgtaacgcc aggtattgac gcgcttttgg atagcgtggg taatgtcgac aatctggtaa
     6541 cttttatctt tcagccatgc gttaacggcg ctttgtacca ttacacccat cgtcaccagt
     6601 aacacaatga tcaacagtaa aaagaagcgg gtaatgctcc ccggtaggag tgaaaagcgg
     6661 gtcgtggccg ttgtctcttt ctgacgcatt cgtgtttatg atctgttaaa acttcgcgaa
     6721 gtgatagggc agtataaagg gtacagtgtg aaattccaga ctcttacctg attgatgatt
     6781 ctctattctc ccgtgatatt tatcatcctg cattggggga aatagatgta caagctccat
     6841 tttgctgtac aaataaccta caaaaagccc aacgaaatta attgcaaata aacgatgatt
     6901 gctggaaatt atgctgatgt taattatttg tgaaatagtt aacaagcgtt atagtttttc
     6961 tgtggtagca cagaataatg aaaagtgtgt aaagaagggt aaaaaaaacc ggatgcgagg
     7021 catccggttg aaataggggt aaacagacat tcagaaatga atgacggtaa taaataaagt
     7081 taatgatgat agcgggagtt attctagttg cgagtgaagg ttttgttttg acattcagtg
     7141 ctgtcaaata cttaagaata agttattgat tttaaccttg aattattatt gcttgatgtt
     7201 aggtgcttat ttcgccattc cacaataatc ttaaaaagtt cccttgcatt tacattttga
     7261 aacatctaca gcgataaatg aaacatctta aaggttttag tatcatattc gtgttggatt
     7321 attctgcatt tttggggaga atggacttgc cgactgatta atgagggtta atcagtatgc
     7381 agtggcataa aaaagcaaat aaaggcatat aacagagggt taataacatg aaagttaaag
     7441 tactgtccct cctggtccca gctctgctgg tagcaggcgc agcaaacgct gctgaagttt
     7501 acaacaaaga cggcaacaaa ttagatctgt acggtaaagt agacggcctg cactatttct
     7561 ctgacaacaa gtcagaagac ggcgaccaga cctatgtacg tcttggtttc aaaggcgaaa
     7621 ctcaggttac tgaccagctg accggttacg gccagtggga atatcagatc cagggcaata
     7681 cctctgaaga caacaaagaa aactcctgga cccgtgtggc attcgcaggt ctgaaattcc
     7741 aggatgtagg ttctttcgac tacggtcgta actacggcgt tgtttacgac gtaacttcct
     7801 ggaccgacgt actgccagaa ttcggtggcg acacctacgg ttctgacaac ttcatgcagc
     7861 agcgtggtaa cggcttcgcg acctaccgta acaccgactt cttcggtctg gttgacggtc
     7921 tgaactttgc tgttcagtac cagggcaaaa acggtagcgt aagcggcgaa ggcatgacca
     7981 acaacggtcg tggcgctctg cgtcagaacg gcgacggtgt cggcggttct atcacttatg
     8041 attacgaagg cttcggtatc ggtgctgcag tttccagctc caaacgtact gatgatcaaa
     8101 atggtagcta catcagcaat ggtgtagttc gtaactacat cggtactggc gaccgtgctg
     8161 aaacctacac tggtggtctg aaatacgacg ctaacaacat ctacttggct gctcagtaca
     8221 cccagaccta caacgcaact cgcgtaggtt ccctgggttg ggcgaacaaa gcacagaact
     8281 tcgaagctgt tgctcagtac cagttcgact tcggtctgcg tccgtctgta gcatacctgc
     8341 agtctaaagg taaaaacctg ggtgtcatca atggtcgtaa ctacgacgac gaagatatcc
     8401 tgaaatatgt tgatgttggc gcgacctact acttcaacaa aaacatgtcc acctatgttg
     8461 actacaaaat caacctgctg gacgacaacc agttcactcg tgacgctggc atcaacactg
     8521 ataacatcgt agctctgggt ctggtttacc agttctaatc tcgattgata tcgaaaaaag
     8581 ggcctgcggg cccttttttc attgttttca gcgtacaaac tcagtttttt ggtgtactct
     8641 tgcgaccgtt cgcatgagga taatcacgta tggaaataag ctttacccgc gtggcactgc
     8701 tggctgccgc gctcttcttt gttggttgcg atcaaaaacc acaacccgcc aaaacccacg
     8761 ctactgaagt taccgttctt gaaggcaaaa ccatgggtac cttctggcgt gccagcatcc
     8821 cgggcattga tgccaaacgc agtgccgaac ttaaagaaaa gattcagacc cagctggacg
     8881 ccgacgatca gctgctttcg acctataaaa aagattccgc gctgatgcgc tttaacgact
     8941 cgcaaagttt gtcgccgtgg ccagtaagtg aagcgatggc cgaaatcgtc actacctcgc
     9001 tgcgcattgg cgcgaagacc gatggtgcga tggatattac cgtcgggccg ctggtaaatc
     9061 tgtggggctt tggcccggaa caacagccgg ttcaaattcc gagccaggaa cagatcgacg
     9121 agatgaaagc caaaactggt ttacagcacc ttacggtcat taatcagtcg catcagcaat
     9181 atctgcaaaa agacctgccg gatttatatg tcgatctctc taccgtcggc gaaggttatg
     9241 cggcggatca cttggcacgc ttgatggagc aggaagggat ttcccgctat ctggtgtcgg
     9301 tgggcggcgc gctgaacagc cgtggtatga acggtgaagg cctgccgtgg cgggtagcga
     9361 ttcaaaaacc aaccgataaa gaaaacgcag ttcaggctgt ggtggatatc aacggtcatg
     9421 ggattagcac ctctggcagc taccgtaact attacgaact ggacggcaaa cgtctttctc
     9481 atgttatcga tccgcaaacc gggcgtccca tcgaacacaa tctggtatcc gtgacggtga
     9541 ttgctccgac ggcgctggaa gccgatgcct gggatactgg cttgatggta ctcgggccgg
     9601 agaaagccaa agaggttgtt cgccgggaag ggctggcggt ttatatgatc accaaagaag
     9661 gcgatagctt taaaacctgg atgtcaccac agtttaaaag cttccttgtc agcgaaaaaa
     9721 attaaagcgc aagattgttg gtttttgcgt gatggtgacc gggcagacta aaggctatcc
     9781 ttaaccaggg agctgattat gaaaaacgcc acatgcttaa ctgacgatca acgctggcaa
     9841 tctgtcttag cccgcgaccc gaatgccgac ggcgaattcg ttttcgccgt gcgcaccaca
     9901 ggcatctttt gccgtccgtc ttgccgcgcc agacatgcct tgcgggaaaa tgtctccttc
     9961 tacgcaaatg ccagcgaggc actcgccgcc ggatttcgcc cctgcaaacg ctgccaacct
    10021 gataaagcca atgcccagca acatcggttg gataaaatca cccacgcgtg tcgactgctg
    10081 gaacaggaaa cgcctgtaac gttggaagcc ttagccgacc aggtggcgat gagtccattt
    10141 catctacatc ggttgtttaa agcgactacc ggaatgacgc ctaaagcctg gcaacaggcc
    10201 tggcgcgctc gccgtttgcg cgaatcgctg gcgaaagggg agagcgtgac gacgtctatt
    10261 cttaacgccg gattccccga cagcagcagt tactaccgca aagccgatga aacgctgggc
    10321 atgacggcta aacaattccg tcacggtggc gaaaatctgg cggtgcgtta cgcgctggct
    10381 gattgtgcgc tgggtcgttg cctggtggca gaaagcgagc gggggatttg cgcgatattg
    10441 ctgggcgatg atgacgcgac attaatcagc gagttgcagc agatgtttcc cgctgccgac
    10501 aacgcgcctg ccgatctgac gtttcagcaa catgtgcgtg aagtgatcgc cagcctcaat
    10561 caacgcgata cgccgctgac gttaccgctg gatattcgcg gcactgcttt tcagcaacaa
    10621 gtctggcagg cactgcgcac gataccttgc ggtgaaaccg tcagttatca gcaactggct
    10681 aacgccatcg gcaaaccgaa agcggtacgg gccgttgcca gcgcctgtgc cgccaacaag
    10741 ctggctatcg taataccctg tcatcgagtg gtccgtggtg atggcacact ttccggttac
    10801 cgctggggcg tgtcgcgtaa agcgcaactg ctgcgccgcg aagctgaaaa tgaggagagg
    10861 taatgttgga tctgtttgcc gatgctgaac cgtggcaaga gccactggcg gctggtgcgg
    10921 taattttacg gcgttttgct tttaacgctg cggagcaact gatccgcgat attaatgacg
    10981 ttgccagcca gtcgccgttt cgccagatgg tcacccccgg gggatatacc atgtcggtgg
    11041 cgatgaccaa ctgtgggcat ctgggctgga cgacccatcg gcaaggttat ctctattcgc
    11101 ccattgatcc gcaaacaaat aaaccgtggc ccgccatgcc acaaagcttt catgatttat
    11161 gtcaacgtgc ggctacggcg gcgggctatc cagatttcca gccagatgct tgtcttatca
    11221 accgctacgc tcctggcgcg aaactgtcgc tgcatcagga taaagacgaa ccggatctgc
    11281 gcgcgccaat tgtttctgtt tctctgggct tacccgcgat ttttcaattt ggtggcctga
    11341 aacgtaatga tccgctcaaa cgtttgttgt tggaacatgg cgatgtggtg gtatggggcg
    11401 gtgaatcgcg gctgttttat cacggtattc aaccgttgaa agcggggttt catccactca
    11461 ccaccgactg ccgctacaac ctgacattcc gtcaggcagg taaaaaagaa taaaaataag
    11521 aattattatt gctgtgcgcg cgaagatgtt taaactgcgg gctgtaattc attgtccggg
    11581 ttttctgcat ggaacttctt gtacttgtct ggcggcagta tcgctggcca tttatcagtg
    11641 tgatggcgct aagcctcgcc agtgcggcat taggcattgg cttaattgct tttatcaatc
    11701 agcgccttat cgaaatggcg gataccagtc tgctggtatt gccggagttt ctgggattat
    11761 tgctgctgtt gatggcagtc actctcggat cgcaactggc gctcaccact ttggggcatc
    11821 acttcgttta ccgactgcgt agtgaattta tcaagcggat tctggatacc cacgtcgagc
    11881 gcattgaaca actcggtagc gcctcgttgc tggcgggatt aaccagcgat gtgcgcaata
    11941 tcaccattgc ttttgtgcgt cttccggaac tggtgcaggg gatcattctc actatcggtt
    12001 ccgcggcgta tctgtggatg ctgtcgggca aaatgttgct ggtaacggct atctggatgg
    12061 cgatcaccat ctggggtggt tttgtactgg tggcgcgggt gtacaaacat atggcgaccc
    12121 tacgtgaaac cgaagacaag ctgtacacgg attttcaaac tgtacttgaa gggcgcaaag
    12181 agctgactct gaaccgggaa cgcgccgagt atgtgtttaa caacctctac atccccgatg
    12241 cgcaagagta tcgccatcat attattcgcg cagacacctt ccatcttagt gccgtgaact
    12301 ggtcaaacat catgatgctg ggcgctatcg gcctggtgtt ctggatggcg aacagtctcg
    12361 gttgggctga taccaacgtt gctgcgacct attcgttgac gcttttattc ctgcgtacgc
    12421 cgctgctttc ggcggttggc gcattgccga cgctgctgac ggcgcaggtg gcgtttaaca
    12481 agctgaacaa attcgcgctc gcgcctttca aagcagagtt tccgcgcccg caggcgtttc
    12541 ccaactggca aacgctggag ctgcgtaatg tgacgtttag ctatcaggat aacgcgtttt
    12601 ccgttggtcc gattaatctc accatcaaac gtggcgagct actgtttctg attggtggta
    12661 acggtagtgg aaaatcgacg ctggcgatgt tgttgacggg cttgtatcag ccacaaagcg
    12721 gcgaaatctt gctggatggc aaacctgtca gcggcgaaca accggaagat tatcgcaaac
    12781 tgttttcggc agtgtttacc gatgtctggc tgtttgatca actgctgggg ccggagggta
    12841 aacccgctaa cccgcaactg gttgagaagt ggctggcgca gctgaaaatg gctcataagc
    12901 ttgagttaag caacgggcgt attgttaacc tgaagttatc aaaagggcag aaaaaacgcg
    12961 tggcgctgtt gctggcgctg gcagaagaac gcgatattat cctgctggat gaatgggcgg
    13021 cggatcagga tccacacttc cgtcgtgagt tttatcaggt gttgctgccg ctgatgcagg
    13081 agatgggtaa aactattttc gctatcagtc atgatgatca ttactttatc cacgccgacc
    13141 gcctgctgga aatgcgcaat gggcaactta gcgagctgac gggcgaagag cgcgatgccg
    13201 cttcgcgtga tgccgttgcc cggacggcat aatattacga cgctgacctg gcggactgct
    13261 gccgtcaggt caatatgcta aaaatccctt catttctaat aaccctataa ttaatcaacg
    13321 aaattataat gtttctaaaa ttagaatata atttataaac attatttaaa tgttgttact
    13381 taagtgttac ctttgatgcc gcgcaaatct cacctgcaat aaagcgacta aaagtaaggc
    13441 attaacaaga tgaaaaaagt gactgccatg ctcttctcga tggccgtggg gcttaatgcc
    13501 gtttcgatgg cggcaaaagc gaaagcgtcc gaggagcagg aaactgatgt actgttgatt
    13561 ggcggcggca ttatgagcgc cacgttgggg acctatttac gcgagctgga gcctgaatgg
    13621 tcgatgacca tgctggagcg cctggagggt gtcgcgcagg agagttcgaa cggctggaat
    13681 aacgccggaa ccgggcattc tgcactgatg gaactgaact acaccccgca aaacgccgat
    13741 ggcagtatca gtattgaaaa agcagtcgcc attaacgaag catttcagat ttcccgccag
    13801 ttctgggcgc accaggtcga gcgcggcgtg ctgcgtactc cgcgttcatt tatcaatacc
    13861 gttccgcata tgagctttgt ctggggcgag gataacgtta atttcctgcg cgcccgttac
    13921 gccgcgttgc aacaaagctc gctgtttcgc ggtatgcgtt actctgaaga tcacgcgcag
    13981 atcaaagagt gggcaccgtt agtgatggaa gggcgcgatc cgcaacagaa agtggcagcc
    14041 acgcgtacgg aaattggtac cgatgtgaac tacggcgaga tcacccgcca gttaattgct
    14101 tccttgcaga agaaatctaa cttctcgctg caactcagca gcgaagtccg cgccctaaag
    14161 cgtaatgacg ataacacctg gaccgttacc gttgccgatc tgaaaaatgg cactgcacag
    14221 aacattcgtg ccaaatttgt ctttatcggc gcgggcggtg cggcgctgaa gctgttacag
    14281 gaatcgggga ttccggaagc gaaagactac gccggtttcc cggtgggcgg acagttcctt
    14341 gtttcggaaa acccggacgt ggttaatcac catctggcga aggtttacgg taaagcatcc
    14401 gttggcgcac caccgatgtc ggttccgcat atcgataccc gcgttctgga cggtaaacgc
    14461 gtagtgctgt ttgggccatt tgccaccttc tcaaccaaat tcctcaaaaa cggttcattg
    14521 tgggatctga tgagttccac caccacctct aacgtgatgc cgatgatgca cgtcgggctg
    14581 gataatttcg atctggtgaa atatctggtg agtcaggtga tgttgagtga agaggatcgt
    14641 tttgaagcgt tgaaagagta ctatccgcag gcgaaaaaag aggactggcg tttgtggcaa
    14701 gcggggcagc gtgtgcagat tatcaagcgt gatgccgata aaggtggtgt actgcgtctg
    14761 ggtactgaag tggtcagtga ccagcaaggg accattgccg cgctcctggg agcatcgcca
    14821 ggggcgtcaa ccgccgcgcc gattatgttg gatctgctgg aaaaagtatt tggcgatcgc
    14881 gtttccagcc cgcaatggca ggctacgttg aaagcgatcg ttccgtctta tggacgcaag
    14941 ctgaacggtg atgtagcggc aacagaacgc gagttgcagt acaccagcga agtgctgggg
    15001 ctgaaatacg acaagccgca ggcagcagat agtacgccaa aaccgcagtt gaaaccgcaa
    15061 cccgttcaaa aagaagtggc ggatattgcg ttgtaatgat gtgccacatc cggcatggta
    15121 tgccggatgt ggcgtatact gataagacgc gccagcgtcg catcaggcaa ccggctcggg
    15181 cgttagatgt tggatgcggc gtaaccgcct tatccaacca acggggtgcc gtacttcaca
    15241 acagtttagc gaacttctgc gttgtcaatt ttctcttccg ccttccagac gcggtatttc
    15301 acatctacat tgtctggcgt atacaccacg atcggcagct tgctgttgta acgcagcatt
    15361 ccagcatcgc ccagatacgc ggtgacaaat ttcttctctt tcttgccatc cgggcaggcc
    15421 atcatcgtgg aaaccggcga gctaacttta tcaaagacat aataatcata gccccagcct
    15481 tccagcgttt tgctttccag cttcccgccg agacgatgca aattgcaatc gacttccagc
    15541 gtctgaccga ttaacagttc tactttcagg gtagattcat cttcttgcgg ggttaactga
    15601 atcacctgac gcttcatccc tttttcagct tgtggataag gcgcgatttt ttccagtggc
    15661 tggacgcttt ctgccgccca ggcggaagtg gtagcgaaag cggcaaacaa tactgcaggt
    15721 agaatggtct tcattttttt gctttccttc ttcatttata ggttttcacc gatgatgtcg
    15781 ctgaaggtta acatattcat aagatttatt aatttgcttt atgaataact taaagaatat
    15841 tcagacaatt ttacctgctc ttttagtgtt aaattctgat gagagaacaa accagcagaa
    15901 atatctctgg tgaattaatc gctatataaa tatgtttata accatttgaa atgtgagcaa
    15961 aagcccgttt ttgccacgct tcccgccact cttttgatcc tgctacaggt tttaccccga
    16021 tcggggtatg catctttgac acatccttta atatcttagc ggttataaaa atggcttatt
    16081 aattatgcgg tttatttggt cgctctcaat tttcagagcg cgttaatgat ggaaggtcaa
    16141 tgtgaagatt gatgcatccc gtcggggcat actcactggt cgctggcgca aagccagtaa
    16201 cggtatccgt ccgccctggt ccggtgatga atctcatttt ctgacccatt gcacccgttg
    16261 cgacgcctgt attaatgctt gtgaaaacaa cattctgcaa cgcggcgcgg gcggctatcc
    16321 gagcgttaat ttcaaaaata acgagtgcag cttctgttac gcttgcgcgc aggcttgccc
    16381 cgaatcgcta ttttctctgc gccacactag ggcctgggat ttgcagttca ccattgggga
    16441 cgcgtgcctg gcgtatcagt cagttgaatg ccgccgctgt caggatagct gtgagccaat
    16501 ggcaattatc tttcgcccga cgctctccgg gatctaccag ccgcaactta atagccaact
    16561 ttgcaacgga tgtggagcat gtgcagccag ctgtccggta tcagccataa ctgcggagta
    16621 tctccatgca cactaactgg caagtttgca gcctggtcgt gcaggccaaa agcgaacgaa
    16681 tttcagacat cagcacccaa ctgaacgcct ttcccggctg tgaagttgct gtcagcgacg
    16741 cgccgagcgg tcagttgatt gtggtggtgg aagcagaaga cagcgaaacg ctgatccaaa
    16801 ccattgagtc agtacgcaac gtagagggcg tgctggcggt gtcgctggtt tatcaccagc
    16861 aggaagagca aggtgaggaa acaccatgaa actcagtcgt cgtagcttta tgaaagctaa
    16921 cgccgttgcg gccgctgcgg cggctgccgg tctcagcgtg ccgggcgttg cccgcgccgt
    16981 tgttggtcag caggaagcca tcaaatggga taaagcgccg tgccgtttct gcggtactgg
    17041 ttgcggcgtt ctggtcggaa cgcagcaggg acgtgtggtg gcctgtcagg gcgacccaga
    17101 cgcaccggtt aaccgtggcc tgaactgcat taagggctat ttcctgccca agatcatgta
    17161 cggtaaagac cgtttgacgc agccgctgct gcgtatgaaa aacggtaaat atgacaaaga
    17221 aggcgaattt accctaatca cctgggatca ggccttcgat gtgatggaag agaaattcaa
    17281 aaccgccctg aaagaaaaag ggccggaatc gatcggtatg ttcggttctg gtcagtggac
    17341 tatctgggaa ggttatgccg cgtccaagct gtttaaagcg ggcttccgtt cgaacaacat
    17401 cgacccgaac gcgcgtcact gtatggcgtc ggcagtagtt ggctttatgc gtacctttgg
    17461 tatggatgag ccgatgggct gctatgacga catcgagcag gctgacgcgt ttgtgctgtg
    17521 gggcgcaaac atggcggaga tgcacccgat cctctggtcg cgcatcacta accgtcgtct
    17581 ctctaatcag aacgtcaccg tggcggtgct ttctacctac cagcatcgta gcttcgagct
    17641 ggcggataac ggcatcatct ttacgccaca gtctgacctg gtgatcctga actacatcgc
    17701 caactatatc attcaaaaca atgcgataaa tcaggacttc ttcagcaaac acgttaacct
    17761 gcgcaaaggg gcgacggaca ttggctacgg tttacgtccg acccatccgc tggaaaaagc
    17821 agcgaagaat ccaggttctg acgcctccga accgatgagc tttgaagatt acaaagcctt
    17881 cgttgccgag tatacgctgg aaaaaactgc cgaaatgacc ggcgtgccga aagaccagtt
    17941 agaacaactg gcgcagctgt atgccgatcc gaacaagaaa gtcatctcct actggacgat
    18001 gggcttcaac cagcatactc gtggcgtgtg ggctaacaac ctggtctaca acctgcacct
    18061 gctgaccggc aaaatttccc agccgggttg cggtccgttc tccctgaccg ggcaaccttc
    18121 tgcgtgtggt actgcgcgtg aagtgggcac ctttgctcac cgtctgcctg cggacatggt
    18181 ggtgaccaac gagaaacacc gtgatatctg cgagaagaag tggaatatcc cgagcggcac
    18241 cattccggcg aaaatcggtc tgcacgcggt ggcacaagac cgtgcgctga aagacggcaa
    18301 actgaatgtt tactggacca tgtgtaccaa caacatgcag gccgggccga acatcaatga
    18361 agagcgtatg ccgggctggc gcgatccgcg caacttcatc atcgtctccg atccgtatcc
    18421 gacagtcagt gcgctggccg ccgacttgat cctgccgacc gcaatgtggg tagagaaaga
    18481 gggcgcttac ggtaacgccg aacgccgtac tcagttctgg cgtcaacagg tacaggcacc
    18541 gggcgaagcg aaatcggatc tctggcagtt agtccagttc tcccgccgct tcaaaactga
    18601 agaagtatgg ccggaagatc tgctggcgaa gaaaccggaa ctgcgtggca aaacgctgta
    18661 cgaagtgctg tatgccacac cggaagtgag caaattcccg gtatccgaac tggcggaaga
    18721 tcagctgaac gatgaatccc gcgagctggg cttctatctg caaaaagggc tgttcgaaga
    18781 gtacgcatgg tttggtcgcg gtcacggtca cgatctggca ccgttcgatg actaccacaa
    18841 agcgcgcggt ctgcgctggc cggtggtgaa cggtaaagaa acgcagtggc gttacagcga
    18901 aggtaacgac ccgtacgtga aagcgggcga aggctataag ttctacggca aaccggatgg
    18961 caaagcggtg atcttcgcac tgccattcga accggcggcg gaagcaccgg atgaagagta
    19021 cgacctgtgg ctctctaccg gacgcgttct ggagcactgg cacaccggca gtatgactcg
    19081 ccgtgtacca gaactgcacc gcgccttccc ggaagcggtc ctgtttattc acccgctgga
    19141 tgcgaaagcg cgcgatctgc gtcgtggcga caaagtgaaa gtggtttctc gccgtggcga
    19201 agtgatctcg attgtcgaaa cgcgcggtcg taaccgtccg ccgcagggcc tggtgtacat
    19261 gccgttcttc gacgccgcac agctggttaa caaactaacg ctggacgcga ccgatccgct
    19321 ctcgaaagag acggacttca agaagtgcgc agtcaaactg gagaaggtgt aagccattat
    19381 gtcccggtca gcgaaacctc aaaatggtcg ccgccgcttt ctgcgcgatg ttgttcgcac
    19441 agcaggcggg ctggctgccg tgggtgtggc gctggggtta caacagcaaa ccgcacgcgc
    19501 atctggcgtg cggttgcgcc cgcccggagc cataaacgag aacgcctttg ccagtgcctg
    19561 tgtgcgttgc ggtcagtgtg ttcaggcttg cccttacgac accttaaaac tggcgacgct
    19621 ggcctctggt ctgtcggcgg gcacgccata ttttgtcgca cgggatattc cttgcgaaat
    19681 gtgtgaggac attccgtgcg ccaaagtgtg cccgagcggt gcgctggatc gtgagatcga
    19741 atcgatcgac gacgcgcgga tggggctggc ggtactggtg gaccaggaaa actgtctcaa
    19801 ctttcagggg ctgcgctgcg atgtttgtta tcgcgaatgc ccgaaaattg atgaggccat
    19861 caccctggag ctggagcgca acacgcgtac cggtaagcac gcccgctttc tgccgacggt
    19921 tcacagagac gcctgtaccg gttgcggtaa gtgcgaaaaa gtgtgcgtgc tggaacaacc
    19981 ggcaatcaag gtgttaccgc tgtcactggc taaaggggag ttaggtcacc attaccgctt
    20041 cggctggctg gaggggaaca atggcaaatc gtaaacgtga cgccgggcgc gaggcgctgg
    20101 agaaaaaagg ctggtggcgc agtcaccgtt ggctggtgtt acgtcgcctt tgtcagttct
    20161 tcgtgctggg gatgtttttg agcggtccgt ggtttggtgt gtggatctta cacggtaact
    20221 acagcagtag cctgttattc gacaccgttc cgctgaccga tccgctgatg acgctgcaaa
    20281 gtcttgccag cggtcatctg cctgccacgg tggcgttgac cggtgcggtg attatcaccg
    20341 tgctctacgc cctggcagga aagcgattat tttgcagctg ggtctgcccg ctgaatccga
    20401 ttaccgactt agcgaactgg ttacgcaggc gctttgacct caatcagtct gcgacgatcc
    20461 ctcgccacat tcgctacgtg ctgttggtgg tcattctgct gggatcggcc ttaactggca
    20521 cgctcatctg ggaatggatc aaccccgtat ctctgatggg gcgcagcctg gtaatgggct
    20581 tcggcagcgg cgcgctgctt attctcgcgc tgtttttatt tgatctactg gtcgttgaac
    20641 acggctggtg cgggcacatt tgtccggttg gcgcgctgta tggcgtgctg ggtagcaaag
    20701 gtgtgattac cgttgcggcc accgatcggc agaaatgtaa ccgctgtatg gattgttttc
    20761 atgtttgccc ggaaccgcgt gtgctacgtg ccccggtgct ggatgaacaa agcccggtgc
    20821 aggtcaccag ccgcgattgc atgacgtgcg gtcgctgcgt ggatgtctgt tctgaggatg
    20881 tatttacaat aactacacga tggagttcgg gagcgaaatc atgaaaagcc atgacctgaa
    20941 gaaagcgctg tgtcaatgga cggcgatgct ggccctggtg gtaagcggcg cggtttgggc
    21001 ggctaatggc gtcgatttta gccagtcgcc ggaagtatcc gggacacagg aaggggccat
    21061 tcgaatgcca aaagagcagg aacggatgcc gctgaactat gtgaatcagc cgccaatgat
    21121 cccgcatagc gttgaaggtt atcaggtaac gaccaatacc aaccgctgct tgcagtgcca
    21181 cggtgtcgaa agttatcgca ccactggcgc gccgcgcatt agtcctactc actttatgga
    21241 cagcgacggc aaagtgggcg cggaagtggc tccgcgtcgt tatttctgtc tgcaatgtca
    21301 cgtaccgcag gccgataccg cgccaatcgt ggggaatacc tttaccccat caaaaggtta
    21361 cgggaaataa gaggttatta tgggaaattc tgaccgtaag cctggtctga ttaagcgcct
    21421 gtggaaatgg tggcgtaccc ccagccgtct ggcgctgggg acgctgctgt tgatcggttt
    21481 tgttggcggc atcgtcttct ggggtggctt taacactggg atggaaaaag ccaataccga
    21541 agagttctgc attagctgcc acgaaatgcg caacacggtg tatcaggaat acatggattc
    21601 cgtgcactac aacaaccgta gcggcgtccg tgcgacctgt ccggattgtc acgttccgca
    21661 cgagtttgtg ccgaagatga tacgcaagct caaagcaagt aaagagctgt atggtaaaat
    21721 ttttggcgtt attgacacgc cgcagaaatt tgaagctcat cgtctgacga tggcacagaa
    21781 tgagtggcgg cgcatgaagg acaataactc gcaggagtgc cgtaactgtc acaacttcga
    21841 gtatatggat acaaccgccc agaaatcggt tgccgcgaag atgcatgacc aggcggtgaa
    21901 agatgggcaa acctgtattg attgccataa agggatagcg cacaagctgc ccgatatgcg
    21961 tgaagtcgag ccaggttttt aacagggtta ttgcgtgggt atgcttgaag ccagagagtt
    22021 actttgtgag cgggatgaac gaaccttatt tagtggcttg tcatttacgc tgaacgcagg
    22081 agagtgggta caaatcaccg gtagcaacgg cgcggggaag acaacgcttc tccgtttgct
    22141 gacggggttg tctcgccctg acgcaggcga ggttctctgg caagggcagc ccttgcatca
    22201 ggtacgcgac agctaccatc aaaacctgtt atggataggc catcagccgg ggatcaaaac
    22261 ccggctgacg gcgttagaaa atctgcactt ttatcatcgc gatggcgata ccgcacaatg
    22321 tctggaagcc ctggcgcagg ccgggcttgc cggattcgaa gatattcctg taaatcagct
    22381 ctcggccggg caacaacgcc gcgtcgcttt agcgcgtctg tggctgaccc gtgccacgtt
    22441 atggatcctc gacgagcctt ttaccgcgat tgacgttaac ggcgtcgatc gtctgaccca
    22501 gcgtatggcg cagcatacgg agcagggggg gattgtgatt ctgactaccc accagccgct
    22561 caacgttgct gaaagtaaaa ttcgccgcat ttcactgacg caaacgaggg ccgcatgatg
    22621 ttctggcgca ttttccgtct tgagctgcgt gtagcgtttc gccatagcgc cgaaatcgcc
    22681 aacccgctgt ggttcttcct gattgtaatt accctttttc cgctcagtat cggtccggag
    22741 ccgcaactgc tggcgcgtat tgcaccgggc attatctggg ttgctgcgct gctttcatcc
    22801 ttgctggcgc tggaacgact gttccgtgac gatttgcagg acggcagtct tgaacaattg
    22861 atgttgttgc cgttaccctt gcccgccgtt gtgctggcga aggtgatggc gcactggatg
    22921 gtaaccggtc tgccgttact catcctttcg ccactggtag caatgctact gggaatggat
    22981 gtttatggct ggcaagtgat ggcgctgacg ctgctgctgg gaacgcctac gcttggcttt
    23041 ctcggtgcac cgggtgtggc gttgacagtg ggacttaagc gcggtggtgt gctgctcagc
    23101 atactggtgt taccgctgac tatcccatta ctcatctttg ccaccgccgc gatggacgcg
    23161 gcttccatgc atttgcccgt tgacgggtat ctggcaattt taggcgcgtt gctggcaggc
    23221 accgcgacat taagtccttt tgcgacggcg gcagcgttac gaatcagcat tcaataacgc
    23281 tggattactg atttttgttc gagtctggta tcgaaactat gtggaaaaca ctgcatcaac
    23341 tggcgatccc accacggctg tatcaaatct gtggctggtt tataccgtgg ctggcaattg
    23401 ccagtgtggt cgtgcttacc gtcggctgga tctggggatt cggctttgct ccggctgatt
    23461 atcagcaggg aaatagctac cgcattatct acctgcatgt gcctgcggcg atctggtcga
    23521 tgggtattta tgcatcaatg gcggtggcgg cgtttattgg ccttgtctgg cagatgaaaa
    23581 tggccaacct ggcggtggcg gcgatggccc ccattggtgc cgtgtttacc tttattgccc
    23641 tggttaccgg ctctgcatgg ggaaaaccga tgtggggcac ctggtgggta tgggatgcac
    23701 gtctgacttc tgaactggtg ctgctgtttt tgtatgtggg tgtgattgcc ctgtggcacg
    23761 ccttcgacga ccgccgtctg gcgggccgtg cggcaggtat cctggtgctg attggcgtgg
    23821 tgaatctgcc gattattcat tactccgtgg agtggtggaa caccctgcat cagggatcaa
    23881 cgcggatgca gcaaagtatc gatccggcga tgcgttcgcc gctgcgctgg tcgatttttg
    23941 gcttcctgct cctgtctgcc acgctgacgc tgatgcggat gcgtaatttg attttgctga
    24001 tggaaaaacg ccgtccgtgg gtgagtgaac tgatactgaa aagaggccgt aaatgacccc
    24061 tgcatttgct tcctggaatg aatttttcgc aatgggcggt tacgcctttt ttgtctggct
    24121 ggcggtggtg atgaccgtta ttccgctggt ggttttggtc gtgcactcgg tgatgcagca
    24181 tcgcgcaatt ctgtgtggtg tggagcaaca gcgggcgcgt gaggcgcgtt tacgtgctgc
    24241 gcaacagcag gaggctgcat gaatattcgc cgtaaaaacc gcttgtggat tgcctgtgct
    24301 gtgttggcag gtttggcgct gaccatcggt ctggtgctgt atgcgctgcg ctcgaatatc
    24361 gatctctttt atacgccggg ggaaattctc tacggcaagc gtgaaactca gcaaatgccg
    24421 gaagtcggtc agcgtctgcg cgttggcggg atggtgatgc cgggtagtgt gcagcgcgat
    24481 cccaattcgc tgaaagtgac cttcaccatt tacgacgctg aaggctcagt ggatgtctct
    24541 tacgaaggca ttttgccgga tctgttccgt gaagggcagg gcgttgtggt gcagggcgag
    24601 ctggaaaaag gcaatcatat cctcgcgaaa gaagtgctgg cgaaacacga cgaaaactac
    24661 acgccgccag aagttgagaa agcgatggaa gctaaccacc gtcgcccggc gagtgtttat
    24721 aaggacccag catcatgatg ccggaaattg gaaacgggct gctgtgcctg gcgctgggaa
    24781 ttgcgctgct gctgtccgtg tatccgctat ggggcgtggc gcgcggagat gcgcgcatga
    24841 tggcgtcttc ccgcttgttt gcctggctgc tgtttatgtc tgtggctggc gcatttctgg
    24901 tgctggtcaa tgctttcgtg gtcaacgact ttaccgtcac ctatgttgcc agcaactcca
    24961 atacccagct tccggtgtgg tatcgcgtgg cggctacctg gggcgcgcat gaaggttcgc
    25021 ttctgctgtg ggtgctgctg atgagcggct ggacctttgc ggtggcgatt tttagtcagc
    25081 gtattccgct ggatattgtg gcccgtgtac tggcgataat ggggatggtc agcgtcggct
    25141 ttttgctgtt cattctcttt acctctaacc cgttctcacg cacgctgccg aacttcccaa
    25201 ttgaagggcg cgatcttaac ccgctgttac aggatccggg gctgatcttc catccgcctc
    25261 tgctttatat ggggtacgtg ggtttctcgg tggcgtttgc ttttgccatt gcttctttgc
    25321 tgagcgggcg tctggacagc acttatgcgc gttttactcg cccgtggacg ctggcggcgt
    25381 ggattttcct gacgctcggc attgtgctcg gttccgcatg ggcctattac gaactcggct
    25441 gggggggctg gtggttctgg gatccggtag aaaacgcctc gtttatgccg tggctggtgg
    25501 ggactgcgct gatgcactca ctggcggtca ctgaacaacg cgccagcttc aaagcgtgga
    25561 cattactgct ggcaatcagt gccttctcgt tgtgtctgct ggggactttc ctggtgcgtt
    25621 ccggcgtgct ggtatcggta cacgcgtttg cctctgattc ggcacgcggt atgtttatcc
    25681 tcgcctttat ggtactggtg attggtggtt cgctgctgct gtttgccgcg cgtggacaca
    25741 aagttcgctc acgcgtaaac aatgcgctgt ggtcgcggga atctctgctg ttagcgaaca
    25801 acgttttgtt ggtcgccgcg atgctggtgg tattactggg gacgctgctg ccgctggtgc
    25861 acaagcaact gggactgggc agtatttcga ttggcgaacc gttcttcaac accatgttta
    25921 cctggctgat ggtgccgttt gcgctgctgc ttggtgtcgg tcctctggtg cgctgggggc
    25981 gcgatcgccc acgtaaaatc cgcaatttat tgattatcgc cttcatctca acgctggtgc
    26041 tgtcgctgct gctgccgtgg ctgttcgaaa gcaaagttgt ggcgatgacg gtgctcggcc
    26101 tggcaatggc ctgctggatt gctgtgctgg caattgcgga agctgcgctg cgtatttcac
    26161 gtggcacgaa aaccaccttc agttattggg gaatggtggc ggctcacctg gggctggcag
    26221 tgacaattgt tggtattgcc tttagccaga actatagcgt tgagcgtgat gtgcgcatga
    26281 agtccggcga tagcgtcgat attcatgaat atcgcttcac cttccgtgat gtcaaagagg
    26341 tgactggccc gaactggcgc ggcggtgtgg cgactattgg cgtaacgcga gagggtaaac
    26401 cggaaacggt gctgtatgcg gaaaaacgtt attacaacac tgccgggtcg atgatgaccg
    26461 aagcggcgat tgacggcggc atcacgcgtg acctgtacgc cgcgctcggt gaagagctgg
    26521 aaaacggcgc gtgggccgtg cgtctttact acaaaccgtt tgttcgctgg atttgggcgg
    26581 gcgggctgat gatggcgttg ggcggactgc tgtgtctgtt tgatcctcgc tatcgtaagc
    26641 gcgtgagtcc gcaaaaaact gcgccggagg ctgtatgaag cgcaaagtat tgttaattcc
    26701 gttgattatc ttcctggcga ttgccgcggc gctgctgtgg cagctggcgc gtaatgccga
    26761 aggggatgat ccgaccaatc tggaatcggc gctcattggc aagccagtgc cgaagtttcg
    26821 cctcgaatca ctggacaatc cggggcagtt ttatcaggcg gatgtgctga ctcagggcaa
    26881 acctgtgctg cttaacgtct gggctacctg gtgtccgacc tgccgtgcgg aacatcaata
    26941 tctgaatcag ctttctgcgc agggcattcg cgtggtcggc atgaactata aagacgatcg
    27001 ccagaaggca ataagctggc tgaaagagct gggcaatcct tacgcgctaa gcctgtttga
    27061 tggcgatggc atgttagggc tggatctcgg tgtctatggc gcgccagaaa cgttcctcat
    27121 cgacggcaac ggcatcattc gctatcgcca tgcgggcgat ctcaatcctc gcgtctggga
    27181 agaagagatc aagccgctgt gggagaaata cagtaaggag gccgcacaat gaggttttta
    27241 ttgggcgtgc tgatgctgat gatctccggc tcagcgctgg cgaccatcga cgtgttgcag
    27301 tttaaggatg aagcgcagga gcagcagttc cgccaactca ctgaagaact acgctgcccg
    27361 aaatgccaga acaacagcat tgccgattcc aactcgatga ttgccaccga cctgcgccag
    27421 aaagtgtatg aactgatgca ggaaggtaaa agtaaaaaag agattgtcga ttatatggtg
    27481 gcgcgttacg gcaacttcgt cacttacgat ccgccgttaa cgccgctgac cgtgctgctg
    27541 tgggtgcttc cggtagtggc tattggcatt ggcggttggg tcatttacgc ccgttcgcgg
    27601 cgtcgggtac gcgtggtgcc ggacgcgttt cctgaacaaa gcgtgccgga aggtaagcgt
    27661 gccggatata ttgtttatct gccgggtatt gtggtggcgt taattgtggc tggcgtcagc
    27721 tactaccaga ctggcaatta tcagcaggtg aaaatctggc agcaggccac ggcacaggct
    27781 ccggcgttgc tggacagggc gctggatccg aaagccgatc cgctcaacga agaagagatg
    27841 tcgcgtcttg cgctggggat gcgtactcaa ctgcaaaaaa atccgggaga tatagaaggc
    27901 tggattatgt tgggccgcgt tggcatggcg ctgggtaacg ccagtatcgc caccgatgca
    27961 tacgctactg cgtatcgcct cgatccgaaa aacagtgatg cagcactggg ttatgctgaa
    28021 gcgttgacac gttcatctga tcccaacgac aaccgcctcg gtggtgaact gctgcgccag
    28081 ttggtgagaa cggaccatag caatatccgt gtgttaagca tgtatgcgtt taatgccttt
    28141 gagcagcagc gatttggcga agccgttgcc gcgtgggaga tgatgttgaa actcttatct
    28201 gccaacgata ctcgccgtgc ggtgattgaa cgtagtatcg cgcaggcgat gcaacatttg
    28261 tcgccgcagg agagtaaata aaaagaggcc cgatggtgat gccatcgggc tatttttatt
    28321 gtgccccgcg ttgttgcagg aacagaatgg tggctgccac gcgtgagcgg acattgagtt
    28381 tgcgcagcag attgcgaata tgtactttta ctgtctgctc tgaaatattc aacaccgagg
    28441 caatctgttt atttgacagc ccctgtgcca gctcgtgcag aacatccagc tcgcgctccg
    28501 tcagcacgct gaagggatct tcttccgcgc caaacatttc acgttcacgt aagtactgat
    28561 tgacgcgttc gctaaagact ttgctgcctt tcgctccagc acgaattgct tccagcaata
    28621 cttccgggtc gctgtctttc aacagataac cgtctgcgcc tgcgtctatc agcgcaaaga
    28681 catcgctgga ggcatctgat acggtcagga taataatttg cgcggtaacg ccatccctgc
    28741 gcaaggcatt gagggtatcc aggccactca tacctttcat attgagatcc agcaagatca
    28801 cgtcgatatc cagtctattc gccagatcga tcgcgctcgc gccgtcgccc gcttcggcga
    28861 ccacttcaaa gccaggatca agctccagta actgacgaac accgcgtcgc ataagtggat
    28921 gatcatccac aatcatcacc tgaaaaggcg ttgcttcagg catagtagtc tcctggggtt
    28981 ttattagaat cattatgttt gagcgtagcg ttggtaacgc taccaggcgc gtgaatgtta
    29041 ccccatttta tgtatggaca tgtagtgaaa actacaacct tgtcgttcgc tttggcatca
    29101 ttttcattat aaagacggaa ttttgcatca gcttc
//
LOCUS       DADMHC010000036        27582 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.036, whole genome shotgun sequence.
ACCESSION   DADMHC010000036 DADMHC010000000
VERSION     DADMHC010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 27582)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27582)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27582
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.036"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            436..3621
                     /gene="rne"
                     /locus_tag="JNZ57_001272"
     CDS             436..3621
                     /gene="rne"
                     /locus_tag="JNZ57_001272"
                     /EC_number="3.1.26.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E"
                     /protein_id="HAY8827554.1"
                     /translation="MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKG
                     KITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIV
                     QIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALANLEL
                     PEGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAF
                     RDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIE
                     SAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQL
                     RLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRL
                     SPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASY
                     LLNEKRSAVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPTLSYMLPKLHEE
                     AMALPSEEEFAERKRPEQPALATFAMPDVPPAPTPAEPAAPVVAPAPKAAPATPAAPA
                     QPGLLSRFFGALKALFSGSEETKPTEQPAPKAEAKPERQQDRRKPRQNNRRDRNERRD
                     TRSERTEGSDNREENRRNRRQAQQQTAETRESRQQAEVTEKARTTDEQQAPRRERSRR
                     RNDDKRQAQQEAKALNVEEQSVQETEQEERVRPVQPRRKQRQLNQKVRYEQSVAEEAV
                     VAPVVEETAAAEPIVQEAPAPRTELVKVPLPVVAQTAPEQQEENNADNRDNGGMPRRS
                     RRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPELASGKVWIRYPIVRPQDVQV
                     EEQREQEEVQVQPMVTEVPVAAAVEPVVSAPVVEEMAEVVEAPVPVAEPQPEVVETTH
                     PEVIAAAVTEQPQVITESDVAVAQEVAEHAEPVVEPQEETADIEEVAETAEVVVAEPE
                     VVAQPAAPVVAEVAAEVETVAAVEPEITVEHNHATAPMTRAPAPEYVPEAPHHSDWQR
                     PTFAFEGKGAAGGHTATHHASAAPARPQPVE"
     gene            complement(3818..4771)
                     /gene="flgL"
                     /locus_tag="JNZ57_001273"
     CDS             complement(3818..4771)
                     /gene="flgL"
                     /locus_tag="JNZ57_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-filament junction protein FlgL"
                     /protein_id="HAY8827555.1"
                     /translation="MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPI
                     AASQAVVLSQAQAQNSQYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTL
                     SDDDRASLATDIQGIRDQLLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESI
                     KQQVDASRSMVIGHTGDKIFDSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADS
                     EADKEIAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMS
                     DLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSLFQLNK"
     gene            complement(4783..6426)
                     /gene="flgK"
                     /locus_tag="JNZ57_001274"
     CDS             complement(4783..6426)
                     /gene="flgK"
                     /locus_tag="JNZ57_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HAY8827556.1"
                     /translation="MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQA
                     NSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTS
                     TSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNI
                     AIGASVDQINNYAKQIASLNDQISRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVS
                     VQDGGTYNITMANGYSLVQGSTARQLAAVPSSADPSRMTVAYVDGTAGNIEIPEKLLN
                     TGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNTQHKAGFDANGDAGEDFFAIGKPA
                     VLQNTKNKGDVAIGATVTDASAVLATDYKISFDNNQWQVTRLASNTTFTVTPDANGKV
                     AFDGLELTFTGTPAVNDSFTLKPVSDAIVNMDVLITDEAKIAMASEKDAGDSDNRNGQ
                     ALLDLQSNSKTVGGAKSFNDAYASLVSDIGNKTATLKTSSATQGNVVTQLSNQQQSIS
                     GVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINIR"
     gene            complement(6492..7445)
                     /gene="flgJ"
                     /locus_tag="JNZ57_001275"
                     /pseudo
     CDS             complement(6492..7445)
                     /gene="flgJ"
                     /locus_tag="JNZ57_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415599.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly peptidoglycan hydrolase FlgJ"
     gene            complement(7445..8541)
                     /locus_tag="JNZ57_001276"
                     /pseudo
     CDS             complement(7445..8541)
                     /locus_tag="JNZ57_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415598.3"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
     gene            complement(8553..9251)
                     /gene="flgH"
                     /locus_tag="JNZ57_001277"
     CDS             complement(8553..9251)
                     /gene="flgH"
                     /locus_tag="JNZ57_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HAY8827557.1"
                     /translation="MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPT
                     PVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSVNASRDGKT
                     NFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGN
                     LHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVSSTQVVDARIEYVGNGYINEAQN
                     MGWLQRFFLNLSPM"
     gene            complement(9304..10086)
                     /gene="flgG"
                     /locus_tag="JNZ57_001278"
                     /pseudo
     CDS             complement(9304..10086)
                     /gene="flgG"
                     /locus_tag="JNZ57_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006819466.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
     gene            complement(10224..10979)
                     /locus_tag="JNZ57_001279"
     CDS             complement(10224..10979)
                     /locus_tag="JNZ57_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgF"
                     /protein_id="HAY8827558.1"
                     /translation="MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV
                     PVEGLSLPTRTLVTASTPGADMTPGKIDYTSRPLDVALQQDGWLAVQTADGSEGYTRN
                     GSIQVDPTGQLTIQGHQVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGR
                     LKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMS
                     DMIASARRFEMQMKVISSVDDNAGRANQLLSMS"
     gene            complement(10999..12927)
                     /gene="flgD"
                     /locus_tag="JNZ57_001280"
                     /pseudo
     CDS             complement(10999..12927)
                     /gene="flgD"
                     /locus_tag="JNZ57_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706995.3"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook assembly protein FlgD"
     gene            complement(12939..13343)
                     /gene="flgC"
                     /locus_tag="JNZ57_001281"
     CDS             complement(12939..13343)
                     /gene="flgC"
                     /locus_tag="JNZ57_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HAY8827559.1"
                     /translation="MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRA
                     KQVVFQVNAAPGAATGGVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEM
                     VNTMSASRSYQANVEVLNTVKSMMLKTLTLGQ"
     gene            complement(13347..13763)
                     /gene="flgB"
                     /locus_tag="JNZ57_001282"
     CDS             complement(13347..13763)
                     /gene="flgB"
                     /locus_tag="JNZ57_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HAY8827560.1"
                     /translation="MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTPGYQARDID
                     FASELKKVMQRGRDATSVVALTMTSTQHIPAQALTPPTAELQYRIPDQPSLDGNTVDM
                     DRERTQFADNSLQYQMSLSALSGQIKGMMNVLQSGN"
     gene            13919..14578
                     /gene="flgA"
                     /locus_tag="JNZ57_001283"
     CDS             13919..14578
                     /gene="flgA"
                     /locus_tag="JNZ57_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation protein
                     FlgA"
                     /protein_id="HAY8827561.1"
                     /translation="MLAIKRSVAIIAILFSPLSAASNLTSQLHTFFSAQLVGVSDEVR
                     VSIRTAPNLLPPCEQPLLSMSNNSRLWGNVNVLARCGNDKRYLQVNVQATGNYVVAAM
                     PIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPDQPIQLTHFRQAW
                     RVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVRMVSGLVVSGVVDADGNILIN
                     L"
     gene            14654..14953
                     /gene="flgM"
                     /locus_tag="JNZ57_001284"
     CDS             14654..14953
                     /gene="flgM"
                     /locus_tag="JNZ57_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma-28 factor FlgM"
                     /protein_id="HAY8827562.1"
                     /translation="MSIDRTSPLNPVSTVQPRETTDAPVTNTRAAKTTDSTSTSTSVT
                     LSDAQAKLMQPGSSDINLERVEALKLAIRNGELKMDIGKIADALINEAQQDLQSN"
     gene            14958..15374
                     /gene="flgN"
                     /locus_tag="JNZ57_001285"
     CDS             14958..15374
                     /gene="flgN"
                     /locus_tag="JNZ57_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis chaperone FlgN"
                     /protein_id="HAY8827563.1"
                     /translation="MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITE
                     QKSSLLATLDYLEQLRKKEPNTANSVDISQRWQEITVKTQQLRQMNQHNGWLLEGQIE
                     RNQQALEMLKPHQEPTLYGANGQTSTTHRGGKKISI"
     gene            complement(15414..16949)
                     /gene="murJ"
                     /locus_tag="JNZ57_001286"
     CDS             complement(15414..16949)
                     /gene="murJ"
                     /locus_tag="JNZ57_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706990.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HAY8827564.1"
                     /translation="MNLLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATDAFFVA
                     FKLPNLLRRIFAEGAFSQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAG
                     MLAAPWVIMVTAPGFADTADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIP
                     AFAPTLLNISMIGFALFAAPYFNPPVLALAWAVTVGGILQLVYQLPHLKKIGMLVLPR
                     INFHDAGAMRVVKQMGPAILGVSVSQISLIINTIFASFLASGSVSWMYYADRLMEFPS
                     GVLGVALGTILLPSLSKSFASGNHDEYNRLMDWGLRLCFLLALPSAVALGILSGPLTV
                     SLFQYGKFTAFDALMTQRALIAYSVGLIGLIVVKVLAPGFYSRQDIKTPVKIAIVTLI
                     LTQLMNLAFIGPLKHAGLSLSIGLAACLNASLLYWQLRKQKIFTPQPGWMAFLLRLVV
                     AVLVMSGVLLGMLHIMPEWSLGTMPWRLLRLMAVVLAGIAAYFAALAVLGFKVKEFAR
                     RTV"
     gene            complement(17155..17982)
                     /locus_tag="JNZ57_001287"
     CDS             complement(17155..17982)
                     /locus_tag="JNZ57_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000736136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HAY8827565.1"
                     /translation="MKKLRIGVVGLGGIAQKAWLPVLAAASDWMLQGAWSPTRAKALP
                     ICESWRIPYADSLSSLAASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRD
                     AERLVELAARKKQTLMVGFNRRFAPLYGELKTQLATAASLRMDKHRSNSVGPHDLYFT
                     LLDDYLHVVDTALWLSGGKASLDGGTLLTNDAGEMLFAEHHFSAGPLQITTCMHRRAG
                     SQRETVQAVTDGALIDITDMREWREERGQGVVHKPIPGWQSTLEQRGFVGCARHFIE"
     gene            complement(17984..18631)
                     /locus_tag="JNZ57_001288"
     CDS             complement(17984..18631)
                     /locus_tag="JNZ57_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF480 domain-containing protein"
                     /protein_id="HAY8827566.1"
                     /translation="MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNR
                     EPVMNLSESEVQEQLDNLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVAL
                     ITTLLLRGAQTPGELRSRAARMYEFSDMAEVESTLEQLANREDGPFVVRLAREPGKRE
                     SRYMHLFSGEVEDQPAVTDMSNAVDGDLQARVEALEIEVAELKPRLDSLLAHLGD"
     gene            complement(18642..19226)
                     /gene="rimJ"
                     /locus_tag="JNZ57_001289"
     CDS             complement(18642..19226)
                     /gene="rimJ"
                     /locus_tag="JNZ57_001289"
                     /EC_number="2.3.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S5-alanine
                     N-acetyltransferase"
                     /protein_id="HAY8827567.1"
                     /translation="MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKP
                     WEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSF
                     HACYLGYSIGQKWQGKGLMFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLG
                     FEKEGYAKDYLLIDGQWRDHVLTALTTPDWTPGR"
     gene            19462..20670
                     /gene="mdtH"
                     /locus_tag="JNZ57_001290"
     CDS             19462..20670
                     /gene="mdtH"
                     /locus_tag="JNZ57_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtH"
                     /protein_id="HAY8827568.1"
                     /translation="MSRVSQARNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWA
                     AVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMGIAHEPWLL
                     WFSCLLSGLGGTLFDPPRSALVVKLIRPQQRGRFFSLLMMQDSAGAVIGALLGSWLLQ
                     YDFRLVCATGAVLFVLCAAFNAWLLPAWKLSTVRTPVREGMTRVMRDKRFVTYVLTLA
                     GYYMLAVQVMLMLPIMVNDVAGAPSAVKWMYAIEACLSLTLLYPIARWSEKHFRLEHR
                     LMAGLLIMSLSMMPVGMVSGLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSY
                     MGFSRLGLAIGGAIGYIGGGWLFDLGKSAHQPELPWMMLGIIGIFTFLALGWQFSQKR
                     AARRLLERDA"
     gene            20734..21381
                     /gene="grxB"
                     /locus_tag="JNZ57_001291"
     CDS             20734..21381
                     /gene="grxB"
                     /locus_tag="JNZ57_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 2"
                     /protein_id="HAY8827569.1"
                     /translation="MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVG
                     QKQVPILQKDDSRYMPESMDIVHYVDKLDGKPLLTGKRSPAIEEWLRKVNGYANKLLL
                     PRFAKSAFDEFSTPAARKYFVDKKEASAGNFADLLAHSDGLIKNISDDLRALDKLIVK
                     PNAVNGELSEDDIQLFPLLRNLTLVAGINWPSRVADYRDNMAKQTQINLLSSMAI"
     gene            21515..22075
                     /locus_tag="JNZ57_001292"
     CDS             21515..22075
                     /locus_tag="JNZ57_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY8827570.1"
                     /translation="MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSK
                     DIGLPGVADAHIVLTNLTSQIGREEPNKVTLTGDANLDMNSLFGSQKATMKLKLKALP
                     VFDKEKGAIFLKEMEVVDATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLREDGS
                     QGEAMAKKLAKGIEVKPGEIVIPFTD"
     gene            22181..23227
                     /gene="pyrC"
                     /locus_tag="JNZ57_001293"
     CDS             22181..23227
                     /gene="pyrC"
                     /locus_tag="JNZ57_001293"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HAY8827571.1"
                     /translation="MTAPSQVLKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMP
                     NLAPPVTTVEAAVAYRQRILDAVPAGHNFTPLMTCYLTDSLDPNELERGFNEGVFTAA
                     KLYPANATTNSSHGVTSIDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREAHFIES
                     VMEPLRQRLTALKVVFEHITTKDAADYVHDGNERLAATITPQHLMFNRNHMLVGGVRP
                     HLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTAL
                     GSYATVFEEMNALQHFEAFCSVNGPQFYGLPVNDTFIELVREEQQVAESIALTDDTLV
                     PFLAGETVRWSVKQ"
     gene            23301..23546
                     /gene="dinI"
                     /locus_tag="JNZ57_001294"
     CDS             23301..23546
                     /gene="dinI"
                     /locus_tag="JNZ57_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein I"
                     /protein_id="HAY8827572.1"
                     /translation="MRIEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVRY
                     AAANNLSVIGVTKEDKQRISEILQETWESADDWFVSE"
     gene            23836..24090
                     /gene="bssS"
                     /locus_tag="JNZ57_001295"
     CDS             23836..24090
                     /gene="bssS"
                     /locus_tag="JNZ57_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309465.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator BssS"
                     /protein_id="HAY8827573.1"
                     /translation="MEKNNEVIQTHPLVGWDISTVDSYDALMLRLHYQTPNKSEQEGT
                     EVGQTLWLTTDVARQFISILEAGIAKIESGDFPVNEYRRH"
     gene            24205..25323
                     /gene="solA"
                     /locus_tag="JNZ57_001296"
     CDS             24205..25323
                     /gene="solA"
                     /locus_tag="JNZ57_001296"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HAY8827574.1"
                     /translation="MKYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHH
                     GDTRLIRHAYGEGEKYVPLVLRAQTLWDELSRHNEDDPIFVRSGVINLGPADSAFLAN
                     VAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAK
                     EAGCAQLFNCPVTAIRHDDDGVTIETVDGEYQAKKAIVCAGTWVKDLLPELPVQPVRK
                     VFAWYQADGRYSVKNKFPAFTGELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERV
                     PFAEVVSDGSEAFPFLRNVLPGIGCCLYGAACTYDNSPDEDFIIDTLPGHDNTLLITG
                     LSGHGFKFASVLGEIAADFAQDKKSDFDLTPFRLSRFQ"
     gene            25371..25484
                     /locus_tag="JNZ57_001297"
     CDS             25371..25484
                     /locus_tag="JNZ57_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706980.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2770 domain-containing protein"
                     /protein_id="HAY8827575.1"
                     /translation="MRRLLHYLINNIREHLMLYLFLWGLLAIMDLIYVFYF"
     gene            25744..26310
                     /locus_tag="JNZ57_001298"
     CDS             25744..26310
                     /locus_tag="JNZ57_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HAY8827576.1"
                     /translation="MSFTNTPERYGVISAAFHWLSAIIVYGMFALGLWMVTLSYYDGW
                     YHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLPSYSPMTRLAAKAGHLALYLLLF
                     AIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHG
                     FMALKHHFIDKDDTLKRMLGKSSSDYGV"
     gene            26314..26889
                     /locus_tag="JNZ57_001299"
     CDS             26314..26889
                     /locus_tag="JNZ57_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HAY8827577.1"
                     /translation="MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLG
                     YSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKY
                     PQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGK
                     IKLKDFNIKTDLGPASQEVDLIISVEGVQQK"
     gene            complement(26931..27521)
                     /locus_tag="JNZ57_001300"
                     /pseudo
     CDS             complement(26931..27521)
                     /locus_tag="JNZ57_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309460.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
BASE COUNT         6608 a         7333 c         6961 g         6680 t
ORIGIN      
        1 aactgtgagt aagcgggtga taaatggtaa aagtcatctt gctataacaa ggcttgcagt
       61 ggaataatga agccgtttcc gtgtccatcc ttgttaaaac aagaaatttt acggaataac
      121 ccattttgcc cgaccgatca tccacgcagc aatggcgtaa gacgtattga tctttcaggc
      181 agttagcggg ctgcgggttg cagtccttac cggtagatgg aaatatttct ggagagtaat
      241 acccagtctg tttctttgat aattgcgctg tttttccgca tgaaaaacgg gcaaccgaca
      301 ctctgcgcct ctttgagctg acgataaccg tgaggttggc gacgcgacta gacacgaggc
      361 catcggttca cacccggaaa ggcgttactt tgcccgcagc ttagtcgtca atgtaagaat
      421 aatgagtaag ttacgatgaa aagaatgtta atcaacgcaa ctcagcagga agagttgcgc
      481 gttgcccttg tagatgggca gcgtctgtat gacctggata tcgaaagtcc agggcacgag
      541 cagaaaaagg caaacatcta caaaggtaaa atcacccgca ttgaaccgag tctggaagct
      601 gcttttgttg attacggcgc tgaacgtcac ggtttcctcc cactaaaaga aattgcccgc
      661 gaatatttcc ctgctaacta cagtgctcat ggtcgtccca acattaaaga tgtgttgcgt
      721 gaaggtcagg aagtcattgt tcagatcgat aaagaagagc gcggcaacaa aggcgcggca
      781 ttaaccacct ttatcagtct ggcgggtagc tatctggttc tgatgccgaa caacccgcgc
      841 gcgggtggca tttctcgccg tatcgaaggc gacgaccgta ccgaattaaa agaagcactg
      901 gcaaaccttg aactgccgga aggcatgggg cttatcgtgc gcaccgctgg cgtcggcaaa
      961 tctgctgagg cgctgcaatg ggatttaagc ttccgtctga aacactggga agccatcaaa
     1021 aaagccgctg aaagccgccc ggccccgttc ctgattcatc aggagagcaa cgtaatcgtt
     1081 cgcgctttcc gcgattactt acgccaggac atcggcgaaa tccttatcga taacccgaaa
     1141 gtgctcgaac tggcacgtca gcatatcgct gcattaggtc gcccggattt cagcagcaaa
     1201 atcaaactgt acaccggcga gatcccgctg ttcagccact accagatcga gtcgcagatc
     1261 gagtccgcct tccagcgtga agtccgtctg ccgtccggtg gttcgattgt tatcgacagt
     1321 accgaagcgt taactgccat cgacatcaac tccgcacgcg cgacccgcgg cggcgatatc
     1381 gaagaaaccg catttaacac caacctcgaa gctgccgatg agattgctcg tcagctgcgc
     1441 ctgcgtgacc tcggcggcct gattgttatc gacttcatcg acatgacgcc tgtacgccac
     1501 cagcgtgcgg tagaaaaccg tctgcgtgaa gcggtgcgtc aggaccgtgc gcgtattcaa
     1561 atcagccata tttctcgctt tggcctgctg gaaatgtccc gtcagcgcct gagcccatca
     1621 ctgggtgaat ccagtcatca cgtttgtccg cgttgttctg gtactggcac cgtgcgtgac
     1681 aacgaatcgc tgtcgctctc tattctgcgt ctgatcgaag aagaagcgct gaaagagaac
     1741 acccaggaag ttcacgccat tgttcctgta ccaatcgctt cttacctgct gaatgaaaaa
     1801 cgttctgcgg taaatgccat tgaaactcgt caggacggtg tgcgctgcgt gattgtgcca
     1861 aacgatcaga tggaaacccc gcactaccac gtgctgcgcg tgcgtaaagg ggaagaaacc
     1921 ccaaccttaa gctacatgct gccgaagctg catgaagaag cgatggcgct gccgtctgaa
     1981 gaagagttcg ctgaacgtaa gcgtccggaa caacctgcgc tggcaacctt tgccatgccg
     2041 gatgtgccgc cagcgccaac gccagctgaa cctgccgcgc ctgttgtagc tccagcaccg
     2101 aaagctgcac cggcaacacc agcagctcct gcacaacctg ggctgttgag ccgcttcttc
     2161 ggcgcactga aagcgctgtt cagcggtagt gaagaaacca aaccgaccga gcaaccagca
     2221 ccgaaagcag aagcgaaacc ggaacgtcaa caggatcgtc gcaagcctcg tcagaacaac
     2281 cgccgtgacc gtaatgagcg ccgcgacacc cgtagtgaac gtactgaagg cagcgataat
     2341 cgcgaagaaa accgtcgtaa tcgtcgccag gcacagcagc agactgccga gacgcgtgag
     2401 agccgtcagc aagctgaggt aacggaaaaa gcacgtacca ccgacgagca gcaagcgccg
     2461 cgtcgtgaac gtagccgccg ccgtaacgat gataaacgtc aggcgcaaca agaagcgaag
     2521 gcgctgaatg ttgaagagca atctgttcag gaaaccgaac aggaagaacg tgtacgtccg
     2581 gttcagccgc gtcgtaaaca gcgtcagctc aatcagaaag tgcgttacga gcaaagcgta
     2641 gccgaagaag cggtagtcgc accggtggtt gaagaaactg ccgctgccga accaattgtt
     2701 caggaagctc cagctccacg cacagaactg gtgaaagtcc cgctgccagt cgtagcgcaa
     2761 actgcaccag aacagcaaga agagaacaat gctgataacc gtgacaacgg tggcatgccg
     2821 cgtcgttctc gccgctcgcc tcgtcacctg cgcgtgagtg gtcagcgtcg tcgtcgctat
     2881 cgtgacgagc gttatccaac ccagtcgcca atgccgttga ccgtagcgtg cgcgtctccg
     2941 gaactggcct ctggcaaagt ctggatccgc tatccaattg tacgtccgca agatgtacaa
     3001 gttgaagagc agcgcgaaca ggaagaagta caagtgcagc cgatggtgac tgaggtccct
     3061 gtcgccgccg ctgtcgaacc ggttgttagc gcgccagttg ttgaagaaat ggctgaagtc
     3121 gtagaagccc ccgtaccggt tgccgaaccg caaccggaag tggttgaaac gacgcatcct
     3181 gaagtgattg ccgccgcggt aactgaacag ccgcaggtga ttaccgagtc tgatgttgcc
     3241 gtagcccagg aagttgcaga acacgcagaa ccggtggttg aaccgcagga agagacggca
     3301 gatattgaag aagttgccga aactgctgag gttgtggttg cagaacctga agttgttgct
     3361 caacctgccg cgccagtcgt cgctgaagtc gcagcagaag ttgaaacggt agccgcggtt
     3421 gaaccagaga tcaccgttga gcataaccac gctaccgcgc caatgacgcg cgctccggca
     3481 ccggaatatg ttccggaggc accgcatcac agtgactggc agcgccctac ttttgccttc
     3541 gaaggtaaag gtgccgcagg tggtcatacg gcaacgcatc atgcctctgc cgctcctgcg
     3601 cgtccgcaac ctgttgagta ataattagct caaagtaatc aagccctggt aactgccagg
     3661 gcttttttat ttcatgtttg aatcaacata ttaaaattca tcaaatggca tccttgctaa
     3721 ccaacaatgc aaaataggca aaaaaaatgc ccgccccggc gatccctgag cgggcagaca
     3781 aaacataccc agtttcatga tatgttttaa agcgagctta tttgttgagc tggaagagcg
     3841 acaatccctg catatcggta aatgctttat acgatgcctg caatgccgtt tgctgcatga
     3901 tgtaagatga aatagttgca ttccagtcca catcaaccag atcgctcatc tgctgcgttt
     3961 gccctaaagc gcgatcgcta cctaaggaat ccagcgactc cagttcgttc agctgcgtgc
     4021 ctaattccgc gcgaacggta aggacattat tcagcgagtt tttcagtcca cggttggttt
     4081 tatccaatgc cgcagcggcg atttctttat ccgcttcgct atccgcgacc ggcgttttca
     4141 gggctgcgat ggcgctatcc agcatggcaa aaagattggt ttcagaagcg ctaccgtctg
     4201 gctccgcaac tgcgttgctg gtaatactgt cgaaaatttt gtcacccgtg tgccctatca
     4261 ccatcgaacg cgaagcatcg acctgttgct taatactttc tgctccaccg acgtatttcc
     4321 ctttctcttc gctaaacggc gcagtctctg ttttataacc ggcaaaaatg tagcgcccgt
     4381 taccgtcagt ggtgttcgcc agattcagca actggtcacg aatcccctga atatccgtag
     4441 ccagcgaggc ccggtcatcg tcactcaagg tgccattgct ggcgtagaca attttttcct
     4501 gagcattctg gatagcagtg gtgacctggc taagtacact ctcttccagt gacacttttt
     4561 gagtggcgaa agtacgcgcc agcgtgtact ggctgttttg cgcctgtgcc tgggagagaa
     4621 ctacggcttg tgatgctgca atgggatcgt cagaagggtt aacgactcgc ttacctgtcg
     4681 acatctgctc gccgtacttc atccattccg cctgagaatt ggtgatgcca cgcatgtttt
     4741 gctggtacat catctgggta ctgaaacgca tcttatctcc ccttagcgaa tgttaatcag
     4801 cgcatcaaaa atcgcgtttg ccgtctgcag aacctgcgca ttcgccaggt aatactgctg
     4861 aaaacgttgc agatttccgt actcttcgtc gagattgacg ccagagatag actgctgctg
     4921 attggaaagc tgcgtcacca cattaccttg cgtggcgcta ctggttttca acgtcgcggt
     4981 tttattaccg atatcactca ctaacgaggc ataagcgtcg ttaaaggatt tcgcaccgcc
     5041 caccgtttta ctgttgcttt gcagatccag cagggcctga ccgttgcggt tatcgctatc
     5101 acccgcatct ttttcgctcg ccatcgctat tttcgcttcg tcggtgatta atacatccat
     5161 gttgacgatg gcgtcactta ctggtttcag cgtgaagctg tcgttaacgg caggcgttcc
     5221 tgtaaacgtc aactccagac catcaaatgc cactttaccg ttggcatccg gcgtcaccgt
     5281 aaaagtggta ttgctggcaa ggcgggtgac ctgccactga ttattatcga acgagatttt
     5341 gtaatctgtc gccagtaccg cggaggcatc agttaccgtg gcaccgatcg caacgtcacc
     5401 tttgtttttc gtgttttgca aaaccgcggg cttaccgata gcaaagaaat cttcaccagc
     5461 atcgccgttg gcatcaaatc cggctttgtg ttgggtgttg aaagcctcgg caaatgccag
     5521 cgccagttgt ccaagcgtat tacgcgtctg gtccagatcc tgagaacgga atgtcagaat
     5581 gccgcccagc gacccggtat tcagtaattt ctccgggatc tcaatattgc ctgccgtccc
     5641 atcaacgtaa gcgacagtca tacgagaagg gtcggcgctg gaaggaactg ccgccagttg
     5701 ccgcgccgta cttccctgaa ccagtgagta accattggcc atcgtgatgt tataagtgcc
     5761 gccatcctga acgctgactt ctacaccaac aatctggttt aattcgctca ccagttgatc
     5821 gcgttgatcc agcagattgt taggtgacgc ccctgccccc acgcctgtca ggcgggagat
     5881 ttggtcgttc aggctggcga tttgtttagc gtaattgttg atctgatcaa cgctggcacc
     5941 tatcgcgata ttgacctgtt tgtcctggtc gcgaagatac tgatcggtgg ttttaaactg
     6001 attcaccaac ccttctgatt tcccaatcag cgcctggcgc gctgccgggt cttccgcgtt
     6061 actcaccagc gtttgcaggc tggtgaagaa atcctgcatc tgtgttgcca gcgaagaggt
     6121 actggtggag agcatattgt cgattttcga catctgctca tagcgggcag tcaggccgct
     6181 actttgcgtc tgcgccgcac gtaactggtt ggtgataaac gcatcatact cacgctgcac
     6241 accagaaacg tagacaccat tgccaaccca gccgccagcg cccaacgtgc tattggcctg
     6301 cgccataata gtggtttggc gggtatatcc ggcaacgtta tagctggaga tattattact
     6361 tgccgtattt aacgccgcct gggccgcgtt cagtccgctc atggcgttat taatcaagct
     6421 ggacatggag gttccttata agccttcaat tacagagtat tatcggcagc gacccgccgg
     6481 acttgagtta ttcagaacag attatcaatg ttcatactgt aggttttgct caccttgtcg
     6541 cttatcgatt tcatctgctg aatcatgttg gtgagtttgc gggcatagtg aggatcggtg
     6601 gcatagcccg cgtcctgtag ggcctgcgcc ccctgctccg cactcgtggc ggtggtcacg
     6661 gcggcgtagc gcgggttacg cgttaacagc ccaacgtaat ccgactatgc ttccagatac
     6721 gagctgtaga cccgaaactt cgcttttact ttcttcgctt cgccgttttc atattcagtc
     6781 gtggtgattt cagtaactgg ccctttccag ttgccagagg ctttgacacc aaacaggtta
     6841 tagctcggct cgccgttttc gcggcggatt tgccgttgcc cccaaccaga ttccagcgcc
     6901 gcctgagcga ggatcaaatg atgtggcaca ccgctttgct ggcttgccag ttgggcgggc
     6961 agcgagagtt gcgcgaggaa tgctttactg tcacccggca gcgaatcatc gtagttacgt
     7021 ggcacggcct tttgcaccag ctgcgaaagc gcctgatttt gataacgcac cacagtttcg
     7081 agcgggaatt tcatcggtgc tgctggcgtg gactcctctg gcaatggttg ttctggcgtc
     7141 atctgtttaa ccatcatctc tgcaagcccc agacctttgc ccgccgtcat ctgttgggca
     7201 atctgctggt catacatact ggtatacagg cgagtgtgct cgctgctgaa caggccatct
     7261 tttggtaaag cgtcgcgcat gcttttcaac atcatctgca cgaacatccc ttccacctga
     7321 cgggccaccg gacgggccac cggacggata tttgccgccg gatcttcgcc cgctttcgcc
     7381 tttagttcgt tgagtgattg cgcatcccag gccgcacttg ccagtagttt gctgtcgctg
     7441 atcatcagat gatttccagt tttgcccgca gacatcccgc actttgcatt gattgcagta
     7501 tggacatcag atccatcggc gtagcgccca gcgcattgag cgcgcgcacc acgttattga
     7561 gcctggcgct ggaacgtacg ctttgcagcg aaccgccgct ctggcgtaaa tcgatctgcg
     7621 tttgtggagt aaccacagtc tgtccaccac caaacggtgt atctggctgg ctgacattgg
     7681 cctgacgatt aactgttact gagagattcc cctgcgctac cgcgcagctg tcgagggtca
     7741 cttcgcgatt catcaccacc gaaccggtgc gcgagttaat cactacttta gcgtcctgcg
     7801 gggtgacatt aacctgcata ttctggatat cggcaaggaa gcggacctgg gaactgttgc
     7861 cactcggtac gcgcacctga atagtccgcg catctaacgc ggtggcgctg ccatatccac
     7921 gcacgcggtt gatggtgtca gcgatttgct gcgccatgct gaaatcttcg tcgttaagtt
     7981 gcaaattaag ggtattcccg acgccaaact ggctgggcaa ttcacgttca ataaccgcac
     8041 cattggtgat ccgtccaccg ttcagttggt taacctgaac actgctaccg ccagcggagg
     8101 ctcctgcgcc gccaaccaga atattgccct gcgccagcgc atacacctga ctgtcaacgc
     8161 ccttaagcgg tgtcatcaac aacgtacctc cacgcaagct tttggcatta cccatggaag
     8221 aaaccaccac atcgatggtt tgcccctgac gtccaaacgg aggaagtgac gctgtcacca
     8281 ttaccgcagc gacgtttttt agctgcatat tggtgcccgt cggaacggta attcccagct
     8341 gtgagagcat gttattaagc gtttgtgtgg taaacggcgt ctgggttgtc tggtcaccgg
     8401 tgccatccag cccaccacca gaccatagcc tatcagtgag ttttgcctta ccccctgaac
     8461 actggtgaga tcgcgaatac gctcagcctg agccgccgtc gtgaccagta gaagaattaa
     8521 tgcagagaga aatttaatca ccacagcctc acttacattg gcgacaggtt aaggaagaaa
     8581 cgctgcaacc agcccatatt ttgcgcttcg ttaatgtagc cattgcctac gtattcaatg
     8641 cgcgcatcca ccacctgagt agacgatacg gtattgctgc cgctgatagt gcgtggatta
     8701 accacgccag agaagcgaat aaattcggta ccctgattaa tggcaatctg tttttcaccc
     8761 accacatgca ggttgccgtt gaccagtacc tggtcaaccg tcaccgtcaa cgtgccgcta
     8821 aaggtattgc tggcattggc cccgcccttt ccgttgaacg tgttaccacc ggaggcttcg
     8881 acatcggcac gagcgttacc aaacagcccc tgcaaatagc gcggcacagt atcaaagcca
     8941 aaattagttt taccgtcacg gctggcattc acagaggagc ttttgctggc gctgacgttc
     9001 tcctgcaaca cgatggtcag cgtatcgcca atattgcgtg gtcgacgatc ttcaaacagc
     9061 ggttgatagc catagttaat cggctgagca gactggaaaa tagaaccgtt ggcgacgggc
     9121 gtcggaccgg gaaccggttg tgcactggtc gccccctgca ccagcggcgt ggagggtatc
     9181 caggcgcagc cggttagtga aagcaccaac aagctggaaa tggcataagt atgcgcagcg
     9241 tttttttgca tggctatcat cttcaaaaat cagtaaaccg gtgaacctgc caccggttaa
     9301 gccttagagt tgcgtcagtt tttgcagcat ctgatcggtg gtggacaccg ctttactgtt
     9361 gatttcgtaa gcgcgttgca cctgaatcat attgaccagt tcttccgcca cgttgacgtt
     9421 agacgtttca acataccctt gatacagcaa tcccgcgccg ttcaggcccg gcgtgctttc
     9481 gttcggtgca ccagaggatt gcgtttcggt gtagaggttt tcgccaatgc tctacagccc
     9541 ggtgtcattc ataaaggtgg tgagattgag ctgcccaacc tgaaccggag ctgcctggcc
     9601 ttgttgggtt acgctgacca cgccatcacg accgatggtg atacttaacg cattcgccgg
     9661 aatggtgatc gctggctgca cctgaaaacc accagccgtc accagctgcc cgttctgatc
     9721 cacctggaaa gagccgtcac gggtataggc tgatgaacca tctggcaaca tcacctggaa
     9781 aaagccctgc cctttaatcg cgacatcttt gctgttgttg gtctgcgaca ggtttccctg
     9841 gctgtgtaag cgttcagtgg cgaccgggcg tacccccgtg ccgatttgta atccggaggg
     9901 taaggtggtt tgttcggaag actgtgcccc cggctggcga atggtttgat aaagcagatc
     9961 ttcaaacacc gcgcgctgac gcttaaaacc gttagtactg acgtttgcca ggttgttggc
    10021 aatgacgtcc atattggttt gctgggcgtc aaggcccgtt ttggcgatcc ataatgaact
    10081 gatcataaaa tgtcctgtag tggattagtg acaagcagag cagaagcacg cgacagtgtg
    10141 aatttcccct caccctaacc ctctccccaa aggggcgagg gaatagtccg cgcgctttta
    10201 ttgcaatgtc atcaatcgtt caattaactc atcgacagca gttggttggc acggcctgcg
    10261 ttatcatcga cgctgctgat caccttcatc tgcatttcaa aacgccgcgc gctggcaatc
    10321 atgtcgctca ttgccgcaac ggcattgacg ttactgcctt ccagaacccc cgacatcaca
    10381 cgcaaggttg gatctgcctg cagtaccggc cctcgcgtgg cctgggtttc tgcgcttaaa
    10441 cgaaaaatgc cgtcgtcacc gcgctgcact tcgctgcccg tggctttcac cagtttcaga
    10501 cgccctactg gcgcaactgt atttgccgga tcgcccggat tgagcgccga gattgtgcca
    10561 tcggcagcaa tagtgatttc cgctccttcc ggcacagcaa ttggccccgc ctcgcctatc
    10621 acctgatgcc cctgaattgt cagttgcccg gtgggatcaa cctgaatgct gccattacgc
    10681 gtataccctt cgctgccgtc agcggtctgc acggccagcc agccatcctg ctgcaacgca
    10741 acgtccagcg ggcgcgaggt gtaatctatc ttgccgggcg tcatgtctgc acccggtgtt
    10801 gacgccgtta ccagcgtgcg cgtgggcagt gaaagccctt ccaccggcac tgcgcgcaag
    10861 gcgtttaact gcgcgcgaaa accgggcgta gaggcattgg ccagattact ggcggttacc
    10921 gcctgttgat tcagcgtctg gctggctgct cccatcgcag tataaattgc gtgatccatt
    10981 gagctatccc gtcagcgatt agcgtaagtt aaccagcgtg ttgaggatct ggtcctgggt
    11041 tttgatggtc tgggcgttag actgatagtt acgctgggca acgatcatat tgaccagttc
    11101 tttactgaga tcgacgttgg acgcttccag cgcaccgttg gtcagggtgc caaagtttcc
    11161 cgtcccggct gtccccaaca gcgccacgcc agaagattgc gtcgcagacc agacgttgtc
    11221 gccttcggat gccagacctt cgttgttggc aaagttcgcc agtacaatct gccccagcag
    11281 ttgagtttgt tcgttggaat agttgccgac aaccgtaccg tcatcattga tttgataact
    11341 caccagatca cccggtttgt agccgttctg gggggttgcc acaatattgt tagcgccggt
    11401 attttgctgc atggagttga ggaagctcag actaaacgtg gcggggtctg caccgttaat
    11461 tgcgccggtt gcgatattat tcgccatcgc accatccact aatgtgccat tagcattaaa
    11521 ttccagtgtt gtcgctgtct tcgcaatgct gtttggatca ctgctatcct gggtgtagac
    11581 ctgccagtta ttatccccgg tcttcacaaa gtagacgctc atgtcatgag cattaccctg
    11641 actgtcgaaa acagtcaccg aacctttttt gttatagcta tccgcattgc tggcgctgaa
    11701 tggcgtaaca gtaggaagcg gatcactgga attcaggttg atctgcatcg acgccgtggt
    11761 ggtagttttc gctgccatca gggtattcgg gatcgaaata ttggtcggat tcgccccttg
    11821 ctgaatagtc ggcggcgtac cggttgccgg gtaacccgtc agctgtaaac cttgcatatt
    11881 caccaggtta cggttttcat ccagcttaaa ttgtccgtta cggctgtaga acaccgaacc
    11941 gttgctgtct accagacgga aaaaaccgtt ctggctgata gcaacgtcca gacctcgccc
    12001 ggtgttggtg gtcgtgccat ctgtaaagtc ctgagtgata ccggcaactt ttacccccag
    12061 tcccactttc gaaccggcaa acatatcggc aaaagaggcc gtgcctgatt taaagccgta
    12121 ggtggcggag ttgacgatat tgttgccaat aacatcgagg ttagtggcgg cagcgtttaa
    12181 tccgctaacc gcttgagaaa aggccatgac tgactcctga aatgtgaagg cttaaattat
    12241 ctgccgtact tcgtcgaggg tggtggtgcc gtaagtgccg agatccagcg tattaccgct
    12301 gttgccgcgg atcacaccct gcaccagagc aaactgcagc ggctgggcaa ccagttgtgt
    12361 accaccgtta ctggcggtaa tcgctacatt gtaagaaccg ttcggcgcag tgctgccatc
    12421 agtcaacgta ccgtcccagg tgaaactgtg aactccggcg gtcagttcac caatatcaat
    12481 ggtgcgcaca accgcgccat ttttatcggt gatggtggcc gtaactttgt ctgccgcctg
    12541 ttgcagctca acaccaaacg gcgtggtcgt ggtcacagcc ccttcttcac tgccggttcc
    12601 cgcaagaaca gttgtgccgg ggatcatcac gccgtgaccg atcaggttac tggcctgtaa
    12661 cgactggctg ttatcaatct gtccggaaat agatccgagc gtggtattga gtttttcaat
    12721 cccgctgacc gtgctgattt gtgccaattg cgacgtcagc tcgttgtttt ccattggatt
    12781 ggtcgggtcc tggtttttca gctgcgccac cagcaaagtc agaaaactgc tttgtaaatc
    12841 tgcggcgttg ctgcccgtga gcgaactact gctggtggta ctgacgccgg tatttgtcgg
    12901 atcggtggtg gttaccgcaa tggacatagc tttctccttt attgaccgag cgtaagggtt
    12961 ttcagcatca tgcttttcac cgtgttgagc acttcaacat tggcctgata gctgcgtgac
    13021 gccgacatgg tgttaaccat ctctccgaca acatcaacgt tcggcatttt tacgtagccc
    13081 tttgcatccg ccagcggatt acccggttca taaaccagtt tgtccggggc ctgactttct
    13141 ataacatcgg caacctttac gccgcctgtc gcagcacctg gtgcagcgtt aacctggaat
    13201 accacctgtt ttgcccgata tggctgtcca tcgggaccgg tcacgctatc agcattcgcc
    13261 agattactgg ccgccacgtt caggcgctgg gactgggcag ttaacgccga cccggcgata
    13321 tcaaaaatat tcagcagtgc catccgttaa tttccgctct gtaaaacgtt catcatgcct
    13381 ttgatttgcc cgctcaacgc actaaggctc atctggtatt gcaggctgtt atcggcaaac
    13441 tgggtgcgtt cgcgatccat atcgacggta ttaccgtcaa gcgaaggctg gtccggaatg
    13501 cggtattgca gttctgcggt aggaggcgtc agcgcctgcg ccggaatgtg ttgcgttgag
    13561 gtcatcgtca gagcaaccac actggttgca tcccgtccac gttgcatgac ttttttaagt
    13621 tcactggcaa aatcgatatc gcgcgcctga taaccagggg tatcggcatt ggcgatgttt
    13681 gctgccagca cttcctgacg ctgggcgcgc agattgagcg cctcttgttg aaaacgtaag
    13741 gcggcgtcga gcttatcgag catatctcct ccgcaggtat caaaattctg ccatcagctt
    13801 aaatgccttt acgcgcgcgt tatcggcgga ataaacgcaa aatgggtcgc tatttatgcc
    13861 gttgatgacc attggggacg ggtacaattc acgttgtaga aatagctggg gggcgaaaat
    13921 gctggcaata aaacgtagcg tggcgatcat cgcgatactg ttcagtccgt taagtgcggc
    13981 gagcaatctc acatcgcaat tgcacacctt ttttagcgcc cagctcgtgg gggtaagtga
    14041 tgaggttcgt gtttctattc gtacagcccc caatctacta ccgccgtgcg agcagccatt
    14101 gctttcgatg agcaataatt cccgcctgtg gggcaatgtg aatgtgttgg cacgctgcgg
    14161 taacgacaaa cgatatttac aggttaatgt gcaggccaca ggaaattatg tggttgccgc
    14221 gatgcccatt gtgcggggag gaaagctgga agctggcaat gtcaaactaa aacgcggacg
    14281 actggatacc ctgccaccgc gtacggtgct ggatatcaat caacttgttg atgccattag
    14341 cctacgcgat ctatcacccg atcaaccaat ccaattaacc cattttcgcc aggcatggcg
    14401 ggtaaaagcg ggacaacgcg tcaacgtgat cgccagcggt gacgggttta gcgccaacgc
    14461 agaaggtcag gcgctgaaca atgcagccgt cgcacagaat gcgcgggtgc gcatggtatc
    14521 gggactggtg gtcagcggcg ttgttgatgc agatgggaat attcttataa acctgtaagc
    14581 tgttaaagat tacccgtccc ttgccgataa ataagcaaca catgataaaa gcgccctcaa
    14641 tgaggaataa accatgagta ttgatcgcac ttcgcctctg aatcccgtaa gcaccgttca
    14701 accgcgcgaa accactgacg cgccggtaac gaacacccgg gcggcaaaaa caaccgactc
    14761 caccagcacc agcaccagtg tgacgttaag cgacgcgcaa gcaaaactga tgcaacccgg
    14821 cagcagtgat atcaatcttg aacgtgtcga agcgttaaaa ctggcgattc gtaacggtga
    14881 actaaaaatg gacatcggca aaattgccga tgcgctgatc aacgaagctc agcaagactt
    14941 gcagagtaac tgatcgtatg acacgtcttg cagagatcct tgaccagatg tccgctgtgc
    15001 ttaacgatct caaaacggta atggatcaag agcagcaaca tctctctatg gggcagatca
    15061 acggcagcca gttgcaatgg attacagaac aaaaaagctc actgctggcg acgctggatt
    15121 acctcgaaca gttacgcaag aaagaaccca atacagcaaa tagcgttgat attagtcaac
    15181 gctggcagga aattactgtg aaaacgcagc aactacgcca aatgaatcaa cataacggtt
    15241 ggttactgga aggacagatt gagcgcaatc aacaggcgct ggaaatgttg aaaccgcatc
    15301 aggaaccgac gctatatggg gcgaacggtc agacctcaac aacccatcgc ggcggtaaaa
    15361 agatttcgat ctgaagatta tctccggcct gcactgcagg ccggaatgca ttgttacacc
    15421 gtccggcggg caaattcttt aactttgaag cccagtaccg ccagtgcagc gaagtacgcg
    15481 gcaatccccg ccagcacgac cgccattaaa cgcagtaagc gccagggcat ggtacccaat
    15541 gaccactccg gcatgatatg taacatacct aaaagcacgc cagacatcac cagtaccgcc
    15601 accaccagac gcaacagaaa cgccatccag ccgggttgcg gagtaaagat tttctgctta
    15661 cgcaactgcc agtaaagcag cgaagcattc agacacgccg ccagaccaat agaaagtgac
    15721 agcccggcat gtttcaacgg accaataaac gccaggttca tcaattgcgt taaaatcagc
    15781 gtaacgatgg caattttcac tggcgtttta atgtcctggc gggaataaaa gccaggagcc
    15841 aacactttca ctacaatcag gccaatcaaa cccaccgagt aggcaattaa cgcccgctgg
    15901 gtcatcagcg catcaaacgc ggtaaattta ccgtactgga acagcgaaac ggttaacgga
    15961 cctgaaagaa tgcccaacgc aaccgcactc ggcagcgcca acaggaaaca aagacgcaac
    16021 ccccagtcca tcaaacggtt gtattcatca tgattgccac tggcaaaact tttcgacagc
    16081 gacggcagca aaatggtgcc aagcgccacg cccagcacac cggacggaaa ctccattaag
    16141 cggtcggcgt aatacatcca agacaccgaa ccggaagcaa gaaacgaggc aaaaatggtg
    16201 ttgatgatta aggagatctg gctcacagag acgccaagga tcgccggtcc catctgtttc
    16261 accacgcgca ttgctccggc atcgtggaag ttaatgcgcg gcaggaccag catgccgatc
    16321 ttcttcaggt gcggtagctg atacaccagc tgcaggatgc cgccgaccgt aacagcccac
    16381 gccagcgcca gcaccggtgg gttaaagtac ggtgcggcaa acagcgcgaa accaatcatg
    16441 ctgatgttaa gcagtgttgg cgcaaacgcc ggaatcgaga agcggttcca cgtattcaga
    16501 atcgctccca ccagcgacgc cagggagatc agcaagatat agggaaaggt aatctttagt
    16561 agctggctgg tcagggcaaa tttgtcagct gtgtcagcga agcctggcgc ggtcaccatg
    16621 atcacccacg gtgcggcgag catgccagcg accgtcacaa ccgccagcgc aagtgtcagc
    16681 aggccagaaa cataagagac aaagacccgc gtggcgtctt caccctgctt acttttatat
    16741 tccgccagaa tcggtacaaa tgcctgggaa aatgcccctt cggcaaagat acggcgtaac
    16801 aagttaggaa gtttaaaagc gacgaaaaag gcgtcggttg ccatccctgc gccaaagatt
    16861 ctggcgacaa ttgcgtctcg tgcgaagcca agcacacgcg aaaacatggt catcgagctg
    16921 acggcggcca gcgattttaa taaattcatc ggtgttctaa tccagaccaa cgggcaaaac
    16981 gcctgcaaga caggcgctga aagaggcgaa tagtctacct ggattatggt gaattgctac
    17041 cgccagatgt tacagggttt attcactcat cgcatcgcgc cagatcttgt caacgatacg
    17101 ttgcgccagc acggcctatt cgccggcggt ttgcggaact gtctgatttt gcactcattc
    17161 aatgaagtgc cgcgcacagc cgacaaatcc acgttgttca agagtgctct gccaaccagg
    17221 aatcggttta tgcactacgc cctgcccgcg ctcctcacgc cattcgcgca tatccgtaat
    17281 gtcgatgagc gcaccgtcag tcacggcctg cacggtttca cgctgacttc cggcacggcg
    17341 atgcatacag gtggtgatct gcaaaggacc ggccgaaaaa tggtgctcgg caaacagcat
    17401 ttcgccagcg tcgttagtca gtagcgtacc gccatccaga gaggctttgc cgcccgacaa
    17461 ccacagcgcg gtatccacca catgcagata atcatccagc aacgtgaaat aaagatcgtg
    17521 tggcccgaca ctattgctac gatgtttatc cattcttagc gaagctgcgg tagcgagttg
    17581 cgtttttaac tcaccgtaga gtggtgcgaa acgacggtta aaaccgacca tcaacgtctg
    17641 ttttttccgc gccgccagtt ccaccagccg ttcagcatcg cgcagatttt ctgccagcgg
    17701 tttatcgaca cagacatgta cacccgcatt gagtaacgta ctgaccacgt caaagtggct
    17761 ggcggtgctg gaatgcacaa aaaccgcatc gcaactggcg gcaaggctgg ataacgaatc
    17821 ggcataagga atgcgccagc tttcacaaat tggcagggct ttcgcgcgcg taggcgacca
    17881 ggctccttgt aacatccagt cagacgctgc cgccagcacc ggtaaccacg ctttttgcgc
    17941 aatgccgcct aatcccacaa cgccgatacg taattttttc actttaatct cccagatggg
    18001 ccagcaacga atcaagacgc ggtttcagtt ctgccacttc gatttccagg gcttcgacgc
    18061 gggcctgtaa atcaccatca accgcgttcg acatatccgt taccgccggc tgatcctcta
    18121 cctcaccact gaaaagatgc atgtagcggc tttcgcgttt acccggttcg cgggccagac
    18181 gcaccacaaa aggaccatct tcgcgatttg ccagttgttc cagcgtcgac tccacttccg
    18241 ccatatcgct gaattcatac attcgcgcgg cgcggctgcg cagttcaccc ggcgtctggg
    18301 caccacgcaa taacaacgtg gtgattaacg ccacttccgc tgcgctcagt ttcagatcgc
    18361 caaattctga attacaaaaa cgttgttcat atttggtgac ccgattacca aagccactca
    18421 ccgtgcgcag ataatggcgt ttgaccagat tatccagttg ctcctgcact tcagattcac
    18481 tcagattcat gaccggttca cggttcgttt tctgattaca ggccgtgact acaccattga
    18541 ctgagagcgg gtattgctcc ggcgtggtca cctgcttttc cagcaagcaa ccaatcacgc
    18601 gagcttcaag ggcagtaagt tgatatttca tgagattctc cttagcggcc gggcgtccag
    18661 tctggggtag ttaatgccgt cagtacgtga tcgcgccatt gtccatcaat caacagatag
    18721 tctttcgcat agccttcttt ttcaaaaccc agtcgcgcca gtaaatcacc gctgcgttta
    18781 ttgtgcggca tataattagc cataatgcga tgaatatgtt gggtgcgctg catataacga
    18841 atggctgcgg tcagggcttc aaacatgagt cctttgccct gccatttttg cccaatcgaa
    18901 taaccgagat agcaggcatg aaaagagcca cgaacaacat tggaaaaatt ggcaacgcca
    18961 ataatctctt tttcgtccgg gtcgaataag ccaaagtaga aagctgaacc ttgtttatga
    19021 aattcgttaa tcatccccag cctggcctgc cagcctgatg gataacagtg gctttcgtcg
    19081 cgcactggct cccagggctt gaggaaatgg cgattctctg cgtaataatc cgcaagacgc
    19141 caggcatcac gatcatgcac cagacgcacg accagtcggt ctgtggttaa gcgcactttt
    19201 ggcacgttac tgcgatagcc aaacattcta tacctactcc ttcccgtaac gtctttaata
    19261 cgctgtaagt attactatac ctgcgcaacc agaccctgtg aaaagtccaa aatgccattt
    19321 tctgcattat tcacatattt gataaaaact ctctatcaaa gcgacgtttt gataaaaaaa
    19381 tattgtcccc gaagtgatgg gaaaagtctt agcggcaatg cagaatagaa agtgctcatc
    19441 ttttatttcc cgggagggga aatgtcccgc gtatcgcagg cgaggaacct gggtaaatat
    19501 ttcctgctca tcgataatat gctggtcgtg ctggggttct ttgttgtctt cccgctgatc
    19561 tctatccgct tcgttgatca aatgggctgg gccgccgtca tggtcggtat tgctctcggt
    19621 ctacgccagt ttattcagca aggtctgggt attttcggcg gcgcaattgc cgaccgcttt
    19681 ggtgccaaac cgatgattgt taccggtatg ctgatgcgcg ccgccggatt cgcaacaatg
    19741 ggtatcgccc acgaaccgtg gctattgtgg ttttcatgcc tgctctcggg actcggcggc
    19801 acgttgtttg atccgccgcg ttcggcgctg gtggtgaaac taatccgtcc acaacaacgt
    19861 ggtcgttttt tctcgctgtt gatgatgcag gacagtgccg gtgcggtcat tggcgcattg
    19921 ttggggagct ggctgttgca atacgacttt cgcctggtct gcgccacagg ggccgttttg
    19981 tttgtgctgt gtgcggcgtt caatgcgtgg ttgttaccgg catggaaact ctccaccgta
    20041 cgcacgcccg ttcgcgaagg catgacccgc gtgatgcgtg acaagcgttt tgtcacctat
    20101 gtcctgacgc tggcgggtta ctacatgctg gctgtacaag tgatgctgat gctgccaatt
    20161 atggtcaacg acgtggctgg cgcgccctct gccgttaaat ggatgtatgc cattgaagcg
    20221 tgtctgtcgt taacgttgct ctaccctatc gcccgctgga gtgaaaagca ttttcgtctg
    20281 gaacaccggt tgatggctgg gctgttgata atgtcattaa gcatgatgcc ggtgggcatg
    20341 gtcagcggcc tgcaacaact tttcaccctg atttgtctgt tttatatcgg gtcgatcatt
    20401 gccgagcctg cgcgtgaaac cttaagtgct tcgctggcgg acgcaagagc tcgcggcagc
    20461 tatatggggt ttagccgtct gggtctggcg attggcggcg ctattggtta tatcggtggt
    20521 ggctggctgt ttgacctggg caaatcggcg caccagccag agcttccgtg gatgatgctg
    20581 ggaattattg gcatcttcac tttccttgcg ctgggttggc agtttagtca gaaacgcgcc
    20641 gcgcgtcgtt tgctggaacg cgacgcctga tttgatactc ccccctgact cctccatact
    20701 gaaagtgaac tgacagccaa atggaggagt cacgtgaagc tatacattta cgatcactgc
    20761 ccttactgcc tcaaagcccg catgattttc ggcctgaaaa atatccccgt cgaattacat
    20821 gttctgctca acgacgacgc agaaacaccc acccggatgg tcggtcaaaa acaggttccc
    20881 attctgcaaa aagatgacag ccgctatatg ccagaaagca tggatatcgt tcactatgtc
    20941 gataaactcg acggcaaacc gttactgacc ggcaaacgtt cccctgccat tgaagagtgg
    21001 ctgcgcaagg tcaatggcta cgccaacaaa ctgctgttgc cgcgttttgc caaatcggca
    21061 tttgatgagt tttctactcc cgccgcgcgc aaatatttcg tcgacaagaa agaggccagc
    21121 gcgggtaatt ttgccgacct gctggcccac tctgacggtc tgattaagaa tatcagcgat
    21181 gatttgcgtg cgctggacaa actgatcgtc aaaccgaacg ccgtgaatgg cgaactttcg
    21241 gaagatgata ttcagctatt tccgctactg cgtaatctga cgttggtagc cggaatcaac
    21301 tggccaagcc gcgttgctga ttaccgcgat aatatggcga aacagacaca aatcaatttg
    21361 ttatcatcaa tggcgattta atcctgaccc gccgcggcag cctgtattcg cgggttgccg
    21421 ccgttttcag ttttttctgc tggcgagttt atcgctggtg acacatgctg cgttgtgtca
    21481 ggatattgac gcagatttca tgtcgaggac taccatgaac aagtttttat ttgccgctgc
    21541 attgatcgtc agtggcctgc tcgttggctg taatcaactc acccaataca ccatcaccga
    21601 acaagaaatt aaccagtcgc ttgcgaaaca taataatttc tcaaaagata tcggtttacc
    21661 cggcgtggct gacgcccata ttgttctgac aaacttgacc agccaaattg gtcgcgaaga
    21721 gccgaataag gttaccctaa ccggagacgc caatctggac atgaactccc tgttcggtag
    21781 tcagaaagcg accatgaaac tgaagctgaa agcgctgccc gtgtttgata aagaaaaagg
    21841 tgcgatcttc ctgaaagaga tggaagtggt cgatgcgacg gtacaaccgg aaaaaatgca
    21901 aacggtgatg caaacgttgc ttccctattt gaaccaggca ttacgcaatt actttaacca
    21961 gcaacctgct tacgtcctgc gcgaagatgg cagtcagggc gaagcaatgg cgaaaaaact
    22021 ggcgaaaggc attgaagtga agccaggcga aattgtcatt ccgtttacgg attaatgacg
    22081 agggcgcatt cgcgcccttt atttttcgtg caaaggaaaa cgtttccgct tatcctttgt
    22141 gtccggcaaa aacatccctt cagccggagc atagagatta atgactgcac catcccaggt
    22201 attaaagatc cgccgcccag acgactggca ccttcacctc cgcgatggcg acatgttaaa
    22261 aactgtcgtg ccgtatacca gcgaaattta tggacgggct attgtaatgc ccaatctggc
    22321 tccgcccgtg accactgttg aggctgccgt ggcgtatcgc cagcgtattc ttgatgccgt
    22381 acctgccggg cacaatttca ccccattgat gacctgttat ttaacagatt cgctggatcc
    22441 taatgagctg gagcgcggat ttaacgaagg cgtgttcacc gctgcaaaac tttatccagc
    22501 aaacgcaacc actaactcca gccacggcgt gacgtcaatt gacgcaatca tgccggtact
    22561 tgagcgcatg gaaaaaatcg gtatgccgct actggtgcat ggtgaagtga cacatgcaga
    22621 tatcgacatt tttgatcgtg aagcgcactt tatagaaagc gtgatggaac ctctgcgcca
    22681 gcgcctgact gcgctgaaag tcgtttttga gcacatcacc accaaagatg ctgccgacta
    22741 tgtccatgac ggaaatgaac ggctggctgc caccatcact ccgcagcatc tgatgtttaa
    22801 ccgcaaccat atgctggttg gtggcgtgcg tccgcacctg tattgtttac ccatcctcaa
    22861 acgcaatatt caccaacagg cattgcgtga actggtcgcc agcggtttta atcgagtatt
    22921 cctcggtacg gattctgcgc cacatgcacg tcatcgcaaa gagagcagtt gtggctgcgc
    22981 gggctgcttc aacgccccaa ccgcgctggg cagttacgct accgtctttg aagagatgaa
    23041 tgctctgcag cactttgaag cattctgttc tgtaaacggc ccgcagttct atggcttgcc
    23101 ggtcaacgat acattcatcg aactggtacg tgaagagcaa caggttgctg aaagcatcgc
    23161 actgactgat gacaccctgg tgccattcct cgccggggaa acggtacgct ggtccgttaa
    23221 acaataaaaa tcgtagcttc ctgttgtcat taggttattt taactgtata aataaccagt
    23281 atattcaaca gggggctatt atgcgaattg aagtcaccat agcgaaaact tctccattgc
    23341 cagctggggc tattgacgcc ctggctggcg aactttcccg ccgtattcag tatgcgtttc
    23401 ctgataatga aggccacgta tcggtacgtt atgccgcagc gaataattta tcggttattg
    23461 gcgtaacaaa agaagataaa cagcgcatta gcgaaattct ccaggaaacg tgggaaagcg
    23521 ccgatgactg gtttgtcagc gaataatatg cagtgatttt tgtttttgcc gggtcgcccc
    23581 ggctttttta ttttacttac aaattttgag tacaaaattt ctacacttcc tcaaaataat
    23641 tgcacaatat gctaaaaaaa tatgaatgac atgctgtttt attgttcata taaatcttaa
    23701 aagcagaaat ttatctgttc ccccctttaa aaattcggtg aataccctta cttattggta
    23761 tactgaagtt gcttcagata aaaacgcatt gaacctcgaa taacgttgtc tagtaacacg
    23821 aattaggggg ccatgatgga aaaaaataat gaagtcattc agactcatcc gctcgtaggg
    23881 tgggacatca gcaccgttga tagctatgat gcgctgatgt tgcgtttgca ctaccagacc
    23941 ccaaataagt ccgagcagga agggactgaa gttggtcaga cgctctggtt aaccactgat
    24001 gttgccagac aatttatttc gatattagaa gcaggaatcg ccaaaattga atccggtgat
    24061 ttcccggtaa acgagtatcg gcgtcattaa catgacatga ccatccaccc aaaaggcacc
    24121 tcaccggtgc ctttaccatt tctgggttgt atatctgcat tcagttaatt actctgctta
    24181 aaccatgaga gcagagagaa aaaaatgaaa tacgatctca tcattattgg cagcggttcc
    24241 gtaggcgctg ccgccgggta ttatgcaacc cgcgccggtt taaacgtgct aatgaccgac
    24301 gcccatatgc caccgcatca acacggcagc caccacggcg atacgcgatt aattcgccat
    24361 gcttatggtg aaggcgaaaa gtatgtcccg ttggtcctcc gcgcgcaaac gctgtgggat
    24421 gaactttccc gccacaacga agatgatccc atttttgtac gctctggtgt cattaacctc
    24481 ggcccggctg actccgcatt tctcgccaac gtcgcccaca gcgccgaaca gtggcaactc
    24541 aacgttgaaa agctcgatgc gcaagggatt atggcccgct ggccagaaat acgcgtcccg
    24601 gacaactaca tcggcttatt tgagactgat tccggttttt tgcgcagcga actggcgatt
    24661 aaaacctgga tccaactggc gaaggaagcg ggctgtgcgc aactgttcaa ctgcccggtc
    24721 accgcaattc gtcatgacga tgatggcgta actattgaaa ccgttgacgg tgagtatcag
    24781 gcgaaaaaag cgattgtctg cgcgggaaca tgggtaaaag acctgctccc ggagctgcct
    24841 gtccagcctg tacgtaaagt atttgcctgg tatcaggccg atggccgcta tagcgtgaag
    24901 aataaattcc cggcgtttac cggtgaactg cccaatggcg atcaatatta tggttttccg
    24961 gcagaaaacg acgcgttgaa gattggcaaa cataacggag gccaggttat ccattcagcg
    25021 gatgaacgtg ttccgtttgc ggaagtggtc agcgatggtt cggaagcctt cccgttcttg
    25081 cgcaatgtat tgccgggtat cggttgctgc ctgtacggcg ctgcctgcac ctatgataat
    25141 tcgcctgacg aagattttat tatcgatacc ctacccggcc acgataatac actgctcatt
    25201 accggcctga gtgggcacgg ttttaaattt gcgtcagttt taggggaaat agctgccgat
    25261 tttgcgcaag acaaaaaaag cgattttgat ttgacgccat tcaggctttc ccgcttccaa
    25321 taatcatcat tacggcctcc agaatgaggc cgtttttaca ggagtattta atgcgtcggc
    25381 tgttgcacta tctcatcaat aatattcgcg agcatctgat gctttatctt tttctctggg
    25441 gattgttggc aattatggat ctgatctatg tgttttattt ttagttttcc gcactgacat
    25501 aaactgacaa atatttaatc tccctttctt ttagcgtgaa aattgaatga gattattcct
    25561 gcttctacag cacttaccag acatctctga tgctgaaccc actaaactta tgaagattct
    25621 ttcattatta attcaaaatt attgaaataa aaataaatat cattcaattt gttatttttg
    25681 tgttgcaatt cattctccga cacgccattt tctttctctc gcaaattcgt attggatgca
    25741 cttatgtcat tcacaaatac ccctgaacgc tatggtgtta tatctgcggc cttccattgg
    25801 ctaagcgcaa ttattgtcta cggcatgttt gctttaggtc tgtggatggt cacgctcagt
    25861 tattacgatg gctggtatca caaagcaccc gaactgcata aaagcatcgg tattttgtta
    25921 atgatggggc tggttattcg cgttctgtgg cgtgtcatat ctccaccgcc gggtccgctg
    25981 ccgagttatt cgcccatgac tcgtcttgcc gcaaaggctg gacatctcgc attgtaccta
    26041 ttgctgttcg ccatcggcat cagcggctat ctgatctcaa ctgccgatgg taaaccgatc
    26101 agcgtttttg gctggtttga cgtccccgcg acccttgccg acgctggcgc acaggcagac
    26161 tttgccggtg ccctgcattt ttggctcgcg tggagcgtcg tagtactgtc cgttatgcac
    26221 ggatttatgg ccctgaagca tcatttcatc gataaagacg acactctgaa gcgcatgctg
    26281 ggaaagtcgt catctgacta tggagtataa aaaatgaaaa aaagcctgct tggtttaacc
    26341 ttcgcgtccc tgatgttctc tgccggttca gcggttgccg ccgattacaa aattgacaaa
    26401 gaaggtcagc acgcctttgt taatttccgc atccagcacc ttggctatag ctggttatac
    26461 ggcaccttta aagatttcga cggtactttt acctttgacg aaaaaaatcc ggctgccgat
    26521 aaagtgaatg tgacaattaa caccaccagc gtcgatacta atcacgccga acgcgataaa
    26581 catcttcgca gtgcagattt cctcaatacc gcaaaatatc cacaggcaac attcacctcc
    26641 accagcgtga agaaagacgg tgacgaactg gatattaccg gcgatctgac gctgaatggc
    26701 gtaaccaaac ccgtcacgct ggaagcgaaa ttaattggtc agggcgacga cccatggggt
    26761 ggtaaacgtg caggcttcga ggccgaaggc aaaattaagc tcaaggactt caatatcaag
    26821 acagatttag gtccagcttc tcaggaagtg gatctgatta tttcagtgga aggcgtacag
    26881 cagaagtaag cgtgaaatgt tgccggatgg cacgcatccg gcaatgatat ttattctgtt
    26941 ggatcaggaa tgcccagtgt tgtattcaga cgtccacgag acttattaaa gatcttattg
    27001 ccattttcac gtcctgcccg acggcgtcgc tgttcttctg gcggtaacgc gctttcttcg
    27061 cagcaaatct cactacaaca acctttgtat ttttccgcgc atactggaca ctgaataaac
    27121 agcaggtggc agccatcatt tttacagttg gtatggctgt cgcacggcgc gccgcactgg
    27181 tggcaatgcg cgataatctc atccgatata cgttcgccca tccgctcgtc aaaaacaaaa
    27241 tttttgccaa taaaacgcac cggcaagccc tgctcgcgcg ccttacgggc gtattcaata
    27301 attccgccct cgatatgcca gactttgttg aatccgttat gtttcatcca agcactggcc
    27361 ttttcacaac gaatgccgcc ggtgcagtac atgacgattt ttttatcttt atgtgcctgc
    27421 atcatctcga ctgcttttgg cagctgctca cggaaggtat ctgccggaat ttcgagcgcg
    27481 ttttcaaagt gccccacttc atactcatag tggttacgca tgaagtggca cactgaattt
    27541 ggccacctga acagaggtga tatgctcacc tcagaacaac ac
//
LOCUS       DADMHC010000037        26807 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.037, whole genome shotgun sequence.
ACCESSION   DADMHC010000037 DADMHC010000000
VERSION     DADMHC010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 26807)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26807)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26807
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.037"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..325)
                     /locus_tag="JNZ57_001301"
     CDS             complement(<1..325)
                     /locus_tag="JNZ57_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HAY8827578.1"
                     /translation="MTISTTSTPHDAVFKSFLRHPDTARDFIDIHLPAPLRKLCDLTT
                     LKLEPNSFIDEDLRQYYSDLLWSVKTQEGVGYIYVVIEHQSKPEELMAFRMMRYSIAA
                     MQNHLD"
     gene            complement(522..1295)
                     /gene="hisP"
                     /locus_tag="JNZ57_001302"
     CDS             complement(522..1295)
                     /gene="hisP"
                     /locus_tag="JNZ57_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter ATP-binding protein
                     HisP"
                     /protein_id="HAY8827579.1"
                     /translation="MSENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGK
                     STFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFN
                     LWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQR
                     VSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHV
                     STHVIFLHQGKIEEEGAPEQLFGNPQSPRLQQFLKGSLK"
     gene            complement(1303..2019)
                     /locus_tag="JNZ57_001303"
     CDS             complement(1303..2019)
                     /locus_tag="JNZ57_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY8827580.1"
                     /translation="MIEILHEYWKPLLWTDGYRFTGVAITLWLLILSVVIGGVLALFL
                     AIGRVSSNKYIQFPIWLFTYIFRGTPLYVQLLVFYSGMYTLEIVKGTEFLNAFFRSGL
                     NCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIAL
                     PAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLI
                     SLFRRAEKRWLQHVKPSSTH"
     gene            complement(2016..2702)
                     /locus_tag="JNZ57_001304"
     CDS             complement(2016..2702)
                     /locus_tag="JNZ57_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311219.1"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HAY8827581.1"
                     /translation="MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRL
                     SELIFEGYTTLIRGVPDLVLMLLIFFGLQIALNTVTEAMGVGQIDIDPMVAGIITLGF
                     IYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQV
                     ILKSTALVSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERR
                     YSVGVKRADL"
     gene            complement(2792..3574)
                     /gene="hisJ"
                     /locus_tag="JNZ57_001305"
     CDS             complement(2792..3574)
                     /gene="hisJ"
                     /locus_tag="JNZ57_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter substrate-binding
                     protein HisJ"
                     /protein_id="HAY8827582.1"
                     /translation="MKKLVLSLSLVLAFSSATAAFAAIPQNIRIGTDPTYAPFESKNS
                     QGELVGFDIDLAKELCKRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQE
                     IAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGIEIV
                     SYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTG
                     MGLRKEDNELREALNKAFAEMRADGTYEKLAKKYFDFDVYGG"
     gene            complement(3795..4577)
                     /gene="argT"
                     /locus_tag="JNZ57_001306"
     CDS             complement(3795..4577)
                     /gene="argT"
                     /locus_tag="JNZ57_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine/arginine/ornithine ABC transporter
                     substrate-binding protein ArgT"
                     /protein_id="HAY8827583.1"
                     /translation="MKKSILALSLLVGLSAAASSYAALPETVRIGTDTTYAPFSSKDA
                     KGDFVGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQE
                     IAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVV
                     AYANQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTG
                     VGLRKDDAELTAAFNKALGELRQDGTYDKMAKKYFDFNVYGD"
     gene            complement(4843..5412)
                     /locus_tag="JNZ57_001307"
     CDS             complement(4843..5412)
                     /locus_tag="JNZ57_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HAY8827584.1"
                     /translation="MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTL
                     SLETDFSLREVQALADVTHDARDISASISSGSFQTLGMVILPCSIKTLSGIVHSYTDG
                     LLTRAADVVLKERRPLVLCVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLD
                     DVINQTVNRVLDQFAITLPEDLFARWQGA"
     gene            complement(5507..7024)
                     /gene="purF"
                     /locus_tag="JNZ57_001308"
     CDS             complement(5507..7024)
                     /gene="purF"
                     /locus_tag="JNZ57_001308"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006820991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HAY8827585.1"
                     /translation="MCGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFR
                     LRKANGLVSDVFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHN
                     GNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAAT
                     NRLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLG
                     FDFLRDVAPGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSAR
                     VNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRT
                     FIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVY
                     LASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAE
                     NPDIQQFECSVFNGVYVTKDVDQGYLDFLDTLRNDDAKAVQRQNEVENLEMHNEG"
     gene            complement(7061..7549)
                     /gene="cvpA"
                     /locus_tag="JNZ57_001309"
     CDS             complement(7061..7549)
                     /gene="cvpA"
                     /locus_tag="JNZ57_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin V production protein"
                     /protein_id="HAY8827586.1"
                     /translation="MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHY
                     YTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGV
                     CFGALRGVLIVAAILFFLDSFTGVSKSEDWSKSQLIPQFSFIIRCFFDYLQSSSSFLP
                     RA"
     gene            complement(7808..8470)
                     /gene="dedD"
                     /locus_tag="JNZ57_001310"
     CDS             complement(7808..8470)
                     /gene="dedD"
                     /locus_tag="JNZ57_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416817.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein DedD"
                     /protein_id="HAY8827587.1"
                     /translation="MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLV
                     PKAGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFEPEPA
                     PVAPPKPKPVEPPKPKVEAPPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEI
                     VGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYT
                     PN"
     gene            complement(8460..9728)
                     /gene="folC"
                     /locus_tag="JNZ57_001311"
     CDS             complement(8460..9728)
                     /gene="folC"
                     /locus_tag="JNZ57_001311"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HAY8827588.1"
                     /translation="MIIKRTPQAASPLASWLSYLENLHSKTIDLGLERVSQVAARLGV
                     LKPAPFVFTVAGTNGKGTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGQELPE
                     SAHTASFAEIESARGDISLTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIVD
                     ADVAVVTSIALDHTDWLGPDRESIGREKAGIFRSAKPAIVGEPEMPSTIADVAQEKGA
                     LLQRRGVEWNYSVTDHDWAFSDAHGTLENLPLPLVPQPNAATALAALRASGLEVSENA
                     IRDGIASAILPGRFQIVSESPRVIFDVAHNPHAAEYLTGRMKALPKNGRVLAVIGMLH
                     DKDIAGTLAWLKSVVDDWYCAPLEGPRGATAEQLLEHLGNGKSFDSVAQAWDAAMADA
                     KAEDTVLVCGSFHTVAHVMEVIDARRSGGK"
     gene            complement(9798..10712)
                     /gene="accD"
                     /locus_tag="JNZ57_001312"
     CDS             complement(9798..10712)
                     /gene="accD"
                     /locus_tag="JNZ57_001312"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HAY8827589.1"
                     /translation="MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLE
                     VCPKCDHHMRMTARNRLHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKET
                     GEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFS
                     ASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNI
                     AEPKALIGFAGPRVIEQTVREKLPLGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAK
                     LMNLPAPNPEAPREGVVVPPVPDQEPEA"
     gene            complement(10868..11527)
                     /locus_tag="JNZ57_001313"
     CDS             complement(10868..11527)
                     /locus_tag="JNZ57_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY8827590.1"
                     /translation="MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLV
                     VTPFLPGDSLLFVAGALASLETNDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGDKLFS
                     NPDSKIFRCSYLDKTHQFYERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
                     VIGALLWVLIFTYAGYFFGTLPFIQSNLKLMIVGIIFVSILPGVFEFIRHKRAAARAA
                     K"
     gene            complement(11610..12422)
                     /gene="truA"
                     /locus_tag="JNZ57_001314"
     CDS             complement(11610..12422)
                     /gene="truA"
                     /locus_tag="JNZ57_001314"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HAY8827591.1"
                     /translation="MSDQQQLPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALS
                     QVANEPITVFCAGRTDAGVHGTGQVVHFETTAQRKDAAWTLGVNANLPGDIAVRWVKA
                     VPDDFHARFSATARRYRYIIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGEND
                     FTSFRAVQCQSRTPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHN
                     QPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPDRYDLPKPPMGPLFLAD"
     gene            complement(12422..13435)
                     /locus_tag="JNZ57_001315"
     CDS             complement(12422..13435)
                     /locus_tag="JNZ57_001315"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HAY8827592.1"
                     /translation="MSEGWNIAVLGATGAVGEALLETLAERQFPVGEIYALARNESAG
                     EQLRFGGKTITVQDAAEFDWTQAQLAFFVAGKEATAAWVEEATNSGCLVIDSSGLFAL
                     EPDVPLVVPEVNPFVLTDYRNRNVIAVPDSLTSQLLAALKPLIDQGGLSRISVTSLIS
                     ASAQGKKAVDALAGQSAKLLNGIPIDEEDFFGRQLAFNMLPLLPDSEGSVREERRIVD
                     EVRKILQDEGLMISASVVQAPVFYGHAQMVNFEALRPLAAEEARDAFAQGEDIVLSEE
                     NEFPTQVGDASGTPHLSVGCVRNDYGMPEQVQFWSVADNVRFGGALMAVKIAEKLVQE
                     YLY"
     gene            complement(13501..14637)
                     /gene="pdxB"
                     /locus_tag="JNZ57_001316"
     CDS             complement(13501..14637)
                     /gene="pdxB"
                     /locus_tag="JNZ57_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-phosphoerythronate dehydrogenase PdxB"
                     /protein_id="HAY8827593.1"
                     /translation="MKILVDENMPYARDLFSRLGEVTAVPGRPIPVAQLADADALMVR
                     SVTKVNESLLAGKPIKFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSS
                     LLMLAERDGFSLHDRTVGIVGVGNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRS
                     LDELVQHADILTFHTPLFKDGPYKTLHLADEKLIRSLKPGAILINACRGAVVDNTALL
                     TCLNEGQKLSVVLDVWEGEPELNVELLTKVDIGTPHIAGYTLEGKARGTTQVFEAYSK
                     FIGHEQHVALDTLLPAPEFGRITLHGPLDQPTLKRLVHLVYDVRRDDAPLRKVAGIPG
                     EFDKLRKNYLERREWSSLYVICDDASAASLLCKLGFNAVHHPAR"
     gene            14736..15731
                     /locus_tag="JNZ57_001317"
     CDS             14736..15731
                     /locus_tag="JNZ57_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulator Flk"
                     /protein_id="HAY8827594.1"
                     /translation="MIQPISGPPPGQPPGQGDNLPSGAGNQPLSSQQRTSLESLMTKV
                     TSLTQQQRAELWAGIRHDIGLSGDSPLLSRHFPAAEHNLAQRLLAAQKSHSARQLLAQ
                     LGEYLRLGNNRQAVTDYIRHNFGQTPLNQLSPEQLKTILTLLQEGKMVIPQPQQREAT
                     DRPLLPAEHNALKQLVTKLTAATGEPSKQIWQSMLELSGVKDGELIPAKLFNHLVTWL
                     QARQTLSQQNTPTLESLQMALKQPLDASELAALSAYIQQKYGLSAQSSLSSAQAEDIL
                     NQLYQRRVKGIDPRDMQPLLNPFPPMMDTLQNMATRPVLWILLVAIILMLVWLVR"
     gene            complement(15728..16906)
                     /locus_tag="JNZ57_001318"
     CDS             complement(15728..16906)
                     /locus_tag="JNZ57_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8827595.1"
                     /translation="MTAVSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHH
                     DLGYGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGGALLLAA
                     ILPVSAPLKFALLVVGRLILGFGESQLLTGALTWGLGIVGAKHSGKVMSWNGMAIYGA
                     LAVGAPLGLLIHSHYGFAALAITTMVLPLLAWACNGTVRKVPALAGERPSLWSVVGLI
                     WKPGLGLALQGVGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVVMRVMFGWMPDRF
                     GGVKVAIVSLLVETVGLLLLWQAPGAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQ
                     VRGTALGGYAAFQDIALGVSGPLAGMLATTFGYSSVFLAGAISAVLGIIVTILSFRRG
                     "
     gene            complement(17199..18419)
                     /gene="fabB"
                     /locus_tag="JNZ57_001319"
     CDS             complement(17199..18419)
                     /gene="fabB"
                     /locus_tag="JNZ57_001319"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HAY8827596.1"
                     /translation="MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGM
                     RSHVWGNVKLDTTGLIDRKVVRFMSDASIYAFLSMEQAIADTGLSPEAYQNNPRVGLI
                     AGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSIS
                     SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKA
                     SRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEG
                     AVRCMKMAMHGVDTPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISATKAMTGHS
                     LGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGF
                     GGTNATLVMRKLKD"
     gene            18578..20584
                     /gene="mnmC"
                     /locus_tag="JNZ57_001320"
     CDS             18578..20584
                     /gene="mnmC"
                     /locus_tag="JNZ57_001320"
                     /EC_number="1.5.-.-"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HAY8827597.1"
                     /translation="MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLG
                     GNQLEVRFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEK
                     FPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINEL
                     TSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRR
                     GLQDAGFTMQKRKGFGRKREMLCGVMEQTLPLPCSAPWFNRTGSSKREAAIIGGGIAC
                     ALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFAR
                     RFYDQLPVKFDHDWCGVTQLGWDEKSQHKITQMLSMDLPAELAVAVEANAVEQITGVA
                     TNCSGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNLSRKDDCWLLNFAGDQ
                     QATHSVVVLANGHQISRFSQTSTLPVYSVAGQVSHIPTTPELAELKQVLCYDGYLTPQ
                     NPANQHHCIGASYHRGSEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDVSDKEARCGV
                     RCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRGLCSAP
                     LCAEILAAQMSDEPIPMDASTLAALNPNRLWVRKLLKGKAVKAG"
     gene            complement(20705..20983)
                     /locus_tag="JNZ57_001321"
     CDS             complement(20705..20983)
                     /locus_tag="JNZ57_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcL family protein"
                     /protein_id="HAY8827598.1"
                     /translation="MIAEFESRILALIDGMIDHASDDELFASGYLRGHLTLAIAELES
                     GDDHSAQAVHTTVSQSLEKAIGAGELSPRDQALVTDMWENLFQQASQQ"
     gene            complement(21017..21565)
                     /locus_tag="JNZ57_001322"
     CDS             complement(21017..21565)
                     /locus_tag="JNZ57_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P hydroxylase"
                     /protein_id="HAY8827599.1"
                     /translation="MNSTHHYEQLIEIFNSCFADEFNTRLIKGDDEPIYLPADAEVPY
                     NRIVFAHGFYASAIHEISHWCIAGKARRELVDFGYWYCPDGRDAQTQSQFEGVEVKPQ
                     ALDWLFCVAAGYPFNVSCDNLEGDFEPDRVVFQRRVHAQVMDYLTNGIPERPARFIKA
                     LQNYYHTLELTAEQFPWPEALN"
     gene            complement(21565..22374)
                     /locus_tag="JNZ57_001323"
     CDS             complement(21565..22374)
                     /locus_tag="JNZ57_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HAY8827600.1"
                     /translation="METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALM
                     AAGMSPANALATNKLQACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQ
                     YVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFG
                     PAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVG
                     QFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN"
     gene            complement(22374..23198)
                     /gene="mepA"
                     /locus_tag="JNZ57_001324"
     CDS             complement(22374..23198)
                     /gene="mepA"
                     /locus_tag="JNZ57_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HAY8827601.1"
                     /translation="MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGC
                     IVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPA
                     GGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEI
                     FSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPA
                     DSLECEDQPLPPPGDGCGAELQSWFAPPKPGTTKPEKKTPPPLPPSCQALLDEHVI"
     gene            complement(23202..24287)
                     /gene="aroC"
                     /locus_tag="JNZ57_001325"
     CDS             complement(23202..24287)
                     /gene="aroC"
                     /locus_tag="JNZ57_001325"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HAY8827602.1"
                     /translation="MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGILLTEADLQHD
                     LDRRRPGTSRYTTQRREPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYSAIKDVF
                     RPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQM
                     GDIPLEIKDWSLVEQNPFFCPDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGL
                     GEPVFDRLDADIAHALMSINAVKGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGI
                     LGGISSGQQIIAHMALKPTSSITVPGRTINRFGEEVEMITKGRHDPCVGIRAVPIAEA
                     MLAIVLMDHLLRQRAQNADVKTDIPRW"
     gene            complement(24322..25254)
                     /gene="prmB"
                     /locus_tag="JNZ57_001326"
     CDS             complement(24322..25254)
                     /gene="prmB"
                     /locus_tag="JNZ57_001326"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HAY8827603.1"
                     /translation="MDKIFVDEAVNELQTIQDMLRWSVSRFSAANIWYGHGTDNPWDE
                     AVQLVLPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGH
                     EFYVDERVLVPRSPIGELINNKFAGLISKQPQHILDMCTGSGCIAIACAYAFPDAEVD
                     AVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSD
                     LPNEYRHEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVGNSMVHLMEQYPDV
                     PFTWLEFDNGGDGVFMLTKEQLLAAREYFAIYKD"
     gene            25420..25971
                     /gene="smrB"
                     /locus_tag="JNZ57_001327"
     CDS             25420..25971
                     /gene="smrB"
                     /locus_tag="JNZ57_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease SmrB"
                     /protein_id="HAY8827604.1"
                     /translation="MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPV
                     KRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHG
                     LTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK
                     EYGGDAALLVLIEVEEWLPPELP"
     gene            complement(26028..26792)
                     /locus_tag="JNZ57_001328"
     CDS             complement(26028..26792)
                     /locus_tag="JNZ57_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004985136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2544 domain-containing protein"
                     /protein_id="HAY8827605.1"
                     /translation="MSGDSGGQSTEFEFHLIIATPDSVNYAIFKATFMPNSQPDLVSW
                     TGDSSTQPSMSKISDSRVSMSACPGLEQYDSQTKTGWTCNELKMFVYYDGNLHGCPWI
                     VSSFVKSRDPFAKTYDDDFPDYIGPTKVSSSCPAVPLASYDVSWNENYVVHNKVVRLQ
                     STGGVIEQTLPTFLMENGKLCNGNNFDERGVYCRFIAQQMTFSTSGCDNAKVTVTPEP
                     QPITSRQLHDMKLRVDTTSRQPIDSTCRFTYILNMY"
BASE COUNT         6617 a         7330 c         6753 g         6107 t
ORIGIN      
        1 catcaagatg gttttgcatt gccgcaatgg aataacgcat catgcgaaaa gccattaatt
       61 cttccggctt actttggtgc tctatcacta cataaatata acccactccc tcctgcgttt
      121 tcacagacca caagaggtcg gaataatatt gccgcaggtc ttcatcaata aaactgtttg
      181 gttccagttt aagcgtcgtt aaatcacaca gtttgcgcag cggcgcggga agatgaatat
      241 caataaaatc ccgcgcggtg tctggatggc gtaaaaaaga tttaaatacc gcatcatgcg
      301 gcgtggaagt tgtcgatatt gtcatggcgt tccgtcaccc ctcaaattta agatgacgcg
      361 acaataacca cgattaacac ccaatgcagc aggcagtttt tatctttgga cagcgaattc
      421 agaagtattt ttagcggact gcaactttta catttcagcg gaagctgact cgcaaattcc
      481 ccatgaaaat actccggcag cgttagccac cggagaggaa attatttcag cgatccctta
      541 aggaactgtt gcagacgagg gctttgcggg ttgccaaata actgctccgg cgcgccctct
      601 tcttctattt tcccctgatg gaggaaaatg acatgagtag aaacatggcg agcaaagccc
      661 atttcgtgag tcactaccac catggttttc ccctcttctg ccagttgctg cataatacgc
      721 aacacttcgc ctaccagttc aggatcgagc gccgaggtag gttcatcaaa cagtaaaact
      781 tccggttcca tcgccagcgc ccgcgcgata gaaacacgct gttgctgacc gccggaaaga
      841 tgcaccggat atttcccctg cgcacgttcg tctatcccga cttttgccag atacttgacc
      901 gcccgctcgc gcgcttcctg cttgctcagg cccaacacct gaatcggcgc ttccatgacg
      961 ttttccagca ccgtcatatg gctccagaga ttgaagtgct ggaataccat cgtcaggcgt
     1021 gtgcgcagta agcgcagttg atttttatcg gcgactttga gttgaccgtc tttgtcgcgc
     1081 accagattga tcgtctggcc attgaccacg atcgaccctt cactcggttt ttcgaggaag
     1141 ttaatgcagc gcagaaaggt acttttcccc gatcccgacg atccgatgat gcttattaca
     1201 tctccggcat tcgcttgcag tgagacccct ttcagcactt catgttcgcc gtagcgtttg
     1261 tgcaaatcga taacgtttaa tttattctcg gacatcgtat tctcagtgcg ttgaagaagg
     1321 tttcacatgc tgcaaccagc gtttttccgc tctgcgaaag aggctgatca ggacataaga
     1381 gatgattaaa tagagcaccg cggcaatgcc gaaggcggta aaaggttgat acgtggcggc
     1441 gttaatatcg cgggctattt tcagcagatc cggcacagtg gccgtaaacg ccagcgcagt
     1501 agagtgcagc atcaggatca cttcgttgct gtatgccggt aacgcaatac gcagcgcaga
     1561 aggcaaaata atgcaacgat acattttaaa agtcgagaag ccataggctc tggcggcttc
     1621 aatttcccca tgcggaaccg aacggattgc cccagcaaaa atctcggtag tgtaagcgca
     1681 ggtgttaagc gtcagcgcca gcacggtaca gttcaggcca ctgcggaaga aagcgttaag
     1741 gaattcggtt cccttaacaa tctcaagcgt gtacatgccg gaatagaaca ccagcaactg
     1801 aacatacagc ggcgtaccgc gaaaaatata ggtaaataac cagattggaa actggatgta
     1861 tttattactg gagacacgac caatcgccag aaacagcgcc aggactccgc ctatcactac
     1921 cgacaaaata agcagccaca gagtgatcgc cacaccagta aagcgataac cgtcggtcca
     1981 cagcagcggt ttccagtatt catgtaagat ttcgatcaca ggtcagccct cttcacaccc
     2041 acggagtagc ggcgctcaag gaacagcagc acaccattgg aaacagtggt gaaaaccagg
     2101 taaatcacgc cacagacgat ggcgaaatag aacggttccc aggtactttt gcctgccagt
     2161 tgggtggctt tgaccacatc ttccaggccg agtaacgaaa ccagtgcggt agatttgagg
     2221 atcacctgcc agttgttgcc aatgcctggc agggcgtaac gcatcatcgc cggaaacatg
     2281 atccgccgaa acacttgccc acgagtaaaa ccgaacgccg tcgccgcctc tatatgtcct
     2341 ttcggcactg ccataaaagc accacggaac gtttcggtaa aataagcacc gtagataaaa
     2401 ccgagagtga taataccagc gaccatcgga tcgatatcaa tctgcccgac gcccatcgcc
     2461 tccgtcaccg tgtttagcgc aatctgcaaa ccgaagaaaa tcagcagcat caacactaag
     2521 tccggcacgc cacgaatcag cgtggtgtac ccttcgaaaa tcagctccga aagccgattt
     2581 tgcgagagct taccgccagc gccaattaaa ccgatgatta cagcgagcac tacagagctg
     2641 atagccagct ccagcgtgac gagcgcaccc tgtaaaataa cacctgaaaa cccatacaac
     2701 atgctgcctg tcctgtcgtg tgtggtgaat taccgcctct tgtctccctc cggttacccg
     2761 aagggagcgg gctttctttc accgatggcg attagccacc ataaacatca aaatcgaagt
     2821 actttttcgc taatttctcg taagtaccgt cagcgcgcat ttcggcaaag gctttgttca
     2881 gtgcttcgcg cagttcgtta tcttctttac gcaggcccat gccggtccct acgccaaaca
     2941 gtttttcatc tttaacagac gggccaccga atttgtaatc tttaccgaca ggttgtttga
     3001 ggaaaccttc gctggcagcg acctcatcct ggaacgcggc atcaatacgt ccggcagtca
     3061 ggtcagaata aatgttgtcc tgcccctgat acgagacgat ttcaatgcct tttggtgccc
     3121 aatgttcatt accgaacgtc tcctgggtgg tgccctgcaa tacgcctacc cgtttgcctt
     3181 tcagcgactc gactgtcggc tgaatgtcag aatttttcgc caccaccaaa cgagaatcgg
     3241 cagcgtacag tttgtcggtg aaggctattt cttgctgacg tttttccgta atggaaagcg
     3301 atgacatgat ggcgtcaatc ttcttcgctt ttaaggacgg gattaacgca tccagcggat
     3361 tttcgacaaa cgtacattgc gtattgatgc gtttgcataa ttcctttgcc agatcgatat
     3421 cgaagccaac cagttcgcct tgtgaatttt ttgattcaaa tggcgcatag gtcgggtcgg
     3481 taccgatgcg gatgttttgc ggaatcgcag caaatgccgc agttgcgctg gagaaggcca
     3541 gaaccagaga gagcgatagc accagttttt tcataatgtc ctcaactgac agtcttttta
     3601 tagggaatat ttacaggttt gttacactta tcgtgccata aaattgacca tcaaggcaaa
     3661 atatcccgcc ccgttagacg tattattttt cattaaaaat gcttaagtat gcatttcaat
     3721 gcaccacgat agtgcaacaa acctagcgtg caccatgatg atcattccat caggtacagc
     3781 ttcccagcga cgtatcagtc accgtagaca ttaaagtcga aatacttttt cgccatcttg
     3841 tcgtaggtgc cgtcctgacg cagctcgcca agcgccttat tgaaggcagc cgtcagttca
     3901 gcatcatctt tacgtagccc tacaccggtg ccatcaccga agtatttttt gtcttttact
     3961 gatgagccag caaaggcgaa atctttacca gcaggttgct tgaggaatcc ttcgctggca
     4021 gcaacttcat cttgtaacgc agcatccaga cgtcctgcag ccagatcgga atagaccaaa
     4081 tcctggttgg cataggccac cacatccacg cctttgctac gccaggtctc gttagcgtaa
     4141 gcttcctggg ttgatccctg cagcacacca acatgtttac ctttcagtga atccagcgtt
     4201 ggctgaatcg gtgaaccttt ggcagcaatc aaacgagaat ctgcggcgta cagcttgtcg
     4261 gagaaagcaa tctcctgctg acgtttatcg gtaatggaaa gcgacgaaat aatggcgtcg
     4321 atttttttcg ctttcagtga ggggatcagc gcgtcaaagt cactggcaac ccaggtacat
     4381 ttcacctgca tccgtttgca catctcgtta ccgagatcga tatcaaagcc aacaaaatca
     4441 cctttagcat ctttcgacga gaacggcgca taggtggtat cggttccgat acgtaccgtc
     4501 tccggtagcg ccgcatagct ggaagccgct gcggagagac cgactaacaa agacagagcg
     4561 agaatcgact tcttcataca taaccctcaa gtgaaaatgg cttttttatg ttgtgtattg
     4621 tgttgtgtgt ttgcaggctc tttcatgcag gtcttatgcc atcttgacga caacagtaac
     4681 attcaacgtt aaatatgtta ataagacgtt gcattattgt cctgaagttg aagatagcag
     4741 gtatagcggt tgaatcgcag cgtttcgatt gaatggcaga aacaaaatgt cgaggatttg
     4801 atcgcggttg caaaattgcc ctgaaacagg gcaacagcgg agttatgcgc cctgccagcg
     4861 ggcaaagaga tcttcaggaa gggttattgc aaactggtca agaacacgat taaccgtctg
     4921 atttatcaca tcatcaaggg attgcgggcg atgataaaac gccggaacag gaggcataat
     4981 caccgcaccg atttctgccg cctgagtcat taaacgcaga tggcctaagt gcaatggtgt
     5041 ttcacgcacg cagagcacca acgggcgacg ctctttcagc accacatctg ccgcacgggt
     5101 cagtaagcca tcagtatagc tatggacaat gccggaaagg gttttgattg aacagggtaa
     5161 aatcaccatc cccagcgtct ggaaagaacc ggaagagatg ctggcggaaa tatcgcgcgc
     5221 atcgtgcgtg acatcagcta atgcctgcac ttcgcgcagg gaaaaatccg tttcgaggga
     5281 taaggtctgg cgcgccgcct ggctcatcac cagatgcgtt tcgatatctg tgacatcgcg
     5341 cagaacctgt aataagcgca cgccataaat cgcgccgctg gcaccgctga tgcctacaat
     5401 gagtcgtttc ataaatagtt gccctgtcag acttgcaggc agactttgca gtatttcggc
     5461 gggagttgca agtcagggtg ccagaccggc accctcagcg aaggcatcat ccttcgttat
     5521 gcatttcgag attttccact tcgttctgac gttgcactgc tttggcgtca tcattacgta
     5581 acgtatcgag gaaatcgagg tagccctgat caacatcttt ggtgacgtag acgccgttga
     5641 acaccgagca ttcaaactgc tggatatccg gattttcagc gcgaacggcg tcgatcagat
     5701 cgttcagatc ctggaaaatc aacccgtcag caccgatgat ctggcgaatt tcatcaactt
     5761 cgcgaccgtg agcgatcagt tccgtggcgc tcggcatatc aataccataa acgttcggga
     5821 agcgaatttc cggtgccgca gaagcgaggt acactttctt cgctccggct tcgcgtgcca
     5881 tctcgataat ctgctcagaa gtggtgccac ggacgatgga gtcgtcgacc agcaggacgt
     5941 ttttatcgcg gaactcggcg cggttggcgt tcagtttacg gcgcacggac ttacgacgca
     6001 gctgctggcc cggcatgatg aaggtgcggc caacatagcg gtttttaacg aagccctggc
     6061 ggtacggctt gcccagaata cgagcaattt ccagcgcgat atcacacgag gtttccggga
     6121 tcgggatcac cacgtcgata tccagatctt cccattcgcg ggcaattttc tcacccagtt
     6181 tcgtgcccat attcacacgc gcgctgtaaa cggaaatttt gtcgataaac gagtccgggc
     6241 gggcaaagta tacatactca aacaggcacg gattgctgac cggattgtca gcacattgac
     6301 gggtaaacaa ctgcccttct tcagtgatgt aaatcgcttc gcccggcgcg acgtcacgca
     6361 ggaaatcaaa gcccagcgta tcgagcgcta cgctttcgga agcgaccata tattctgtac
     6421 ggttctcgtc aatatcacgt tttcccagta ccagcggacg aatcccgttt ggatcgcgga
     6481 aagcaaccat accgtggccg ataatcatcg ccacacaggc atatgcgccg cggattaagc
     6541 ggtttgtggc agcaatggca gcgaaaatat tgtcggcttc cagcgggtag tggcggaagt
     6601 tgtccagctc gctagcgaag atattaagca gaatttccga gtcggaagtg gtgttgatgt
     6661 ggcggcgttt ttcttcaaac agttttttac gcaactcgtg agcgttggtc agattgccgt
     6721 tgtgggcaag cgtaatacca tacggggagt taacgtaaaa cggctgcgct tcagaggcgc
     6781 tggagctgcc agccgtaggg taacgcacat gaccaatgcc catattgccc tgcaaacgct
     6841 gcatatggcg agcttcaaat acatcgctca ccagcccgtt cgctttacgc aaacggaagc
     6901 agttattggc atctatggtg atgatgccgg cggcatcctg accgcgatgc tgaagcaccg
     6961 ttaaggcatc ataaatcgac tggttaaccg gcataacacc ggcgataccg acaataccgc
     7021 acatacgtct ttttcctcgt taagccacat ctcagagcac ttacgctctg ggcaagaaac
     7081 ttgacgagct ttgcagataa tcaaaaaaac atctgatgat aaaactgaac tgcgggatca
     7141 gctgtgattt gctccagtct tcgcttttcg acaccccggt aaaggagtcg agaaagaaga
     7201 gaatggcggc aacaatcaac acaccgcgca acgcaccgaa acagacgccc agcacccgat
     7261 cggtgcctga caaccccgtt ttctccacca actggcctat cacgaagttc acgatagcac
     7321 caacgatcag ggtagcgata aacagtaccg cgatggcaat tccatttcga accagttcgt
     7381 cttcaaagcc cgtaaaccag actgacaggt aagtgtagta atgactggca acaaagaaag
     7441 cacaacccca tgtcaccagc gataacgctt cacgaacaaa gccgcggatc aggctaacca
     7501 gagaggaaaa agcaatcacc gcgattatgg cgtaatcaat ccagaccata tgtgtcccac
     7561 gattttacgc cctgtcatcc tgttcggggc gcattctaac agaaaaagaa aacgtttgcg
     7621 tagggatttc cttcccacgc atcaataaaa atggcgctga aaaaatattc aacgccatcg
     7681 actttttatg cctttgcggc atcgtgcaat gcgtgtcgga tgcggcgtaa acgccttatc
     7741 cgacctacgg ttctaacact gcccaggcct gataagacgc gccagcgtcg catcaggcaa
     7801 gactgtatta attcggcgta tagcccatta ccacgccact taagccagaa agttgcttca
     7861 actcacccag cgaacctttc agcttatctt tcgaggcatc cggcccaacc agaatacggg
     7921 taattttacc ctgcactggc gtggatggcg acgtataaac ccgataaccg gcaccgcgca
     7981 gcttaccgac aatctcattc actttatcgg catttttcag cgcacccagt tgcacaacat
     8041 aggctttacc cgttggcgct gctttttctt ccacgaccgg cttcggttct ggcttcggcg
     8101 caggtggtgc ttcaaccttc ggtttaggcg gctccaccgg tttcggcttc ggtggggcga
     8161 ccggtgcagg ttccggttca aactcggtgt tattggctgc aatagtggcc ggatcgagcg
     8221 acggtgctgc ggcatcacct gcccgcacct cttccgctgc gccttccggc ggctgcgtcg
     8281 gcaacgcctg ggtggcggct ggcatcatat caggctcatc gcgatcgccc gcttttggaa
     8341 ccagcgggat agccgcaaac tcatcctgat aatgtttttt ctgcccgtcc agcagccctg
     8401 gaagtacaat cacccccagc gccaccagca cgatcgtgcc cactaaccga ttctgaaact
     8461 tacttgccac cgcttctcct cgcgtcaatc acttccatga catgtgcgac cgtgtggaaa
     8521 gaaccacaca ccagcacggt gtcttccgct ttagcgtccg ccattgcggc atcccatgcc
     8581 tgcgcaacgc tatcaaatga tttgccgtta cccaaatgct caagcagttg ttctgccgtg
     8641 gcaccgcgcg gcccttccag tggcgcacaa taccagtcat caaccacgct tttcaaccag
     8701 gccagagttc cggcaatatc tttatcatgt agcataccga taaccgccag cacgcgcccg
     8761 tttttcggta gcgctttcat acgcccggtg agatattccg ccgcatgtgg attatgcgcg
     8821 acatcaaaaa taacgcgtgg cgactcgctc acaatctgga aacgtcccgg caaaattgcg
     8881 ctggcaatcc cgtcgcgaat ggcattttca ctgacttcca gcccgctggc acgcagtgcc
     8941 gccagcgctg ttgcggcatt cggttgcggg acaagcggca acggcagatt ttccagcgtg
     9001 ccgtgagcat cgctaaacgc ccagtcatga tcggtgacgg aatagttcca ctcaacgccc
     9061 cgacgttgta acagtgcacc tttttcctgc gccacatcag caatggtaga aggcatttcc
     9121 ggctcaccga caattgccgg ttttgcgctg cgaaagatgc ctgctttctc gcgaccaata
     9181 ctttcgcgat ctggccccag ccagtcggta tgatccagcg caatactggt tactaccgcg
     9241 acatcggcat cgacaatatt ggttgcgtcc agacgaccgc ccagccctac ttccagaatc
     9301 accacgtcaa gttgtgcctg tttgaacagc cacaacgccg acagcgtacc gtactcgaaa
     9361 taggtcaggg aaatatcacc gcgtgccgat tcaatctccg caaaagaggc ggtgtgggcc
     9421 gattccggca attcctgacc ctgcacacgt acgcgctcgg tataacgcac cagatgcggc
     9481 gaactgtaga cgcccacttt gtaccctgcc gccatcagaa tcgactccag cgtacggcag
     9541 gtggtgcctt tgccattcgt acccgcaacg gtaaacacaa atggcgctgg tttcagaacg
     9601 ccaagacgag ccgcgacctg gctcacgcgc tcaaggccga gatcgatagt tttactgtgc
     9661 aggttttcca gataagaaag ccacgaagcc agaggcgacg cggcttgagg agtgcgtttg
     9721 ataatcatgg tatccgctga ttcgttacgg tgagaatagc aaaagggcag agccagtggc
     9781 cctgccctta tcagttatca ggcctcaggt tcctgatccg gtaccggggg taccactacg
     9841 ccttcacgcg gcgcttcagg attcggcgct ggcagattca tcaacttcgc cagaatgctc
     9901 gccagtttca ggcgcatttc cggacgacgg acgatcatgt cgatcgcgcc tttctcgatc
     9961 aggaattcac tgcgctggaa tcctagcggc agtttttcgc gaacggtctg ttcgataaca
    10021 cgcggaccgg caaagccaat taacgctttc ggttcagcga tgttgagatc gcccagcatg
    10081 gcgaaacttg cagaaacacc gcccatcgtc gggtcggtca gcacggagat gtacggcaag
    10141 ccgcgctcct gcatttttgc cagtgccgca gaggttttcg ccatctgcat cagcgacatc
    10201 agtgcttcct gcatacgtgc gccaccagag gcggagaagc agatcagcgg gcagttatct
    10261 tccagcgcct gctcaacggc acgcacgaaa cgtgcaccca caacagaccc cattgaaccg
    10321 cccataaagg cgaactcgaa tgccgcagcg acaaccggca ttccatacag agtgcctttc
    10381 atcaccacca gcgcatcttt ttcgccggtt tctttctgcg cagaagccag acggtcttta
    10441 tacttcttgg agtcacgaaa cttcagcaca tctttcggct caagctcgct acccagctcc
    10501 acaaggcttc cttcatctaa caggctatgc aggcgattac gcgctgtcat acgcatgtga
    10561 tggtcacact tcggacagac ctcaagatta cgttccagct cagcgcggta taaaacctga
    10621 ccgcagctat cacacttagt ccacacccct tcaggaatgc tcgccttgcg ggtgggagta
    10681 atgttgcttt taattcgttc aatccagctc attagggacc tttctgtctg aacctggttc
    10741 gatgccagtt ttatctttgg ggacgcataa tgccattttt gcccccaaca gaccatgaat
    10801 gttgcacatt aaaacataac agcccgaaac tttggataaa aaagtggtcg aaccgcggag
    10861 ttacttttta ttttgcggcg cgtgccgcag cgcgtttgtg acgaataaat tcgaaaaccc
    10921 caggcaatat tgaaacaaaa ataatgccaa caatcatcag cttaaggttg ctctgaatga
    10981 aggggagcgt gccgaagaaa taacccgcgt aggtaaaaat cagtacccac aacagtgcgc
    11041 cgatcacgtt ataagcggcg aaatgacggt acgacatgtg gcccattccc gcaacaaacg
    11101 gcgcgaacgt tctgacgatc ggtacaaaac gggcgagaat aatcgttttg ccgccatgtc
    11161 tctcgtaaaa ctgatgagtc ttatcaagat aactgcaacg aaagattttc gaatccgggt
    11221 tactgaacag tttgtcacca aataaccgtc caatggtata gttcactgca tcaccgacaa
    11281 tagcggcaat caacataagc accaccatca tatggacatt gagatcgtta gtttccagcg
    11341 acgccaatgc accagcaaca aacagcagcg aatcaccagg caggaatggc gttaccacca
    11401 gccccgtttc gcagaacaga atcaaaaaca gaatggcata aacccagacg ccgtactccg
    11461 cgaccagctc tgccagatgc acgtcaatgt gcaggataaa atcgatgagg aaataaatca
    11521 ggtccatatt tgcctatgcc ttgtactcgt catctttcag gctgtaacta cgttggctac
    11581 agcctgaaat gttccgagca ttattctcgt tagtccgcca gaaatagcgg gcccattggc
    11641 ggttttggaa gatcataccg gtcagggtaa tccaccgcga ccagatacag cccttccgct
    11701 tttgccgttg ctgccgccag cgttctgtcc tttgccgcca gcaactctgc tatccagctc
    11761 tccggctggt tgtgggcacc gacttccatc aggctgccga caatattcct gaccatatga
    11821 tgtacaaagg cattcgcttt gatatctacc accacataag gaccgtgacg cgtgacatta
    11881 atatgcataa cgttgcgcca cggggttcgg gactggcact gcaccgcacg gaacgaggtg
    11941 aaatcattct cgcccagcaa gcattgcgca gcccgatgca tccgttcagc gtccagcggt
    12001 tcgtaaaaat gggttacccc tttactcagt accgccgggc gcagccgatg attgtagatg
    12061 atgtagcgat aacggcgagc cgtggcgcta aatcgggcat gaaaatcatc aggtacagct
    12121 ttaacccaac gcacggcgat gtcaccaggt aaattcgcat ttacgcccaa ggtccacgcc
    12181 gcgtctttgc gctgcgcggt tgtttcgaaa tgcaccacct gcccggtacc gtgtacccct
    12241 gcgtcagtac gcccggcgca gaagacggtg atgggttcgt tcgccacctg ggagagcgcc
    12301 ttttccagct tctcctgcac actgcggact tcattctgcc gttgccagcc gtaatactta
    12361 ctgccgtcgt actcaatgcc cagcgcaatt ttataaactg gcagttgttg ctggtcggac
    12421 attagtacag atactcctgc accagtttct cggcgatttt tactgccatc agcgcgccgc
    12481 caaagcgaac gttatcggcc accgaccaga actggacttg ctccggcata ccgtagtcat
    12541 tacgcacgca gccaacagaa agatgcggcg tacccgaagc atcccctacc tgagtcggga
    12601 attcgttctc ttcagagagc acaatatctt cgccctgagc aaacgcatca cgcgcttctt
    12661 ctgccgccag cggacgcagt gcttcaaagt tgaccatctg ggcatgaccg tagaataccg
    12721 gtgcctggac gacgcttgcc gaaatcatca gcccttcgtc ctgcaggatt ttgcgtactt
    12781 cgtcaacgat acgacgttct tcacgcacgc taccttcgct atccggcaac aacggcagca
    12841 tattgaacgc cagttgacga ccgaagaaat cttcttcgtc aatcggaatg ccgttgagca
    12901 atttcgcact ctgccccgct aacgcatcga ccgctttttt gccctgggcg gaggctgaaa
    12961 tcaggctggt aacactgata cgcgacaaac cgccctgatc gattaacggt ttcagtgccg
    13021 ccagcagctg gctggtcaga ctgtctggta cggcgatgac attccggttg cggtaatcgg
    13081 tcagtacaaa cgggtttact tccggcacca ccagcggtac gtcgggttcg agagcaaaca
    13141 gtccgctgct gtcgatcacc aggcaacctg agttggtcgc ttcttcaacc caggcagcgg
    13201 tagcttcttt gcctgcgaca aaaaatgcca gctgcgcctg cgtccagtcg aattcagcgg
    13261 catcctgcac ggtgattgtt ttaccaccaa agcgcagttg ttcgcctgcg ctttcgttac
    13321 gtgccagtgc ataaatttcc ccaaccggga actgacgttc agccagcgtt tcaagcaggg
    13381 cttcgcccac agcgccagtt gcgcccagga cggcaatgtt ccagccttca gacatggtgg
    13441 tttactccag aaatagcaaa gctccctgcc aatgttacag cagagagcat gaagaagaga
    13501 ttaacgtgcc ggatgatgaa cggcgttaaa acccagttta cacagcaatg atgccgcact
    13561 ggcgtcatca caaattacat acagagatga ccattcacgg cgctcaagat agtttttgcg
    13621 cagtttatcg aactcacccg gtatcccggc gactttacgc agcggtgcgt catcgcggcg
    13681 cacatcatac accaaatgca ccagcctttt cagcgtcggt tgatcgagcg ggccatgcag
    13741 cgtaatgcga ccaaactctg gcgcgggcag taatgtatcc agcgcaacgt gctgttcatg
    13801 cccaataaac ttgctatagg cttcaaacac ttgcgtagta ccgcgtgctt taccttccag
    13861 ggtataacct gcgatatgcg gcgtgccgat atccactttt gtcagcaact ccacgttaag
    13921 ttccggttcg ccttcccaga catccagcac tacgcttaac ttctggcctt cattcaggca
    13981 ggtcagcaac gcagtattat cgacgactgc gccacggcaa gcgttaatca gaatcgctcc
    14041 cggcttcagg ctacggatca gtttttcatc cgccagatgc agcgttttgt acggcccatc
    14101 tttgaagagt ggcgtatgga aagtcagaat atccgcatgc tgaactaatt catccagcga
    14161 gcggaaatca ccctcatccc cacggtcagc gcgaggcgga tcgcaaagca atgttttaat
    14221 ccctaacgct tccagtcgcg cctgcaatcg acgtccaacg ttaccaacgc ccacgatccc
    14281 caccgtacgg tcgtgcagtg aaaatccatc gcgttcggca agcatcagta gtgaggagaa
    14341 aacatattcc accaccgcaa tcgcattaca gccaggtgca gcggaaaaac caattcccgc
    14401 ctgcttcaac catgcttcat cgacatggtc ggtcccagca gtggcagtgc caacaaattt
    14461 aatgggtttt cctgccagca aagattcatt cactttcgtg accgaacgca ccatcagcgc
    14521 atccgcgtct gccagttgag cgacggggat tggacgcccg ggaaccgcgg tcacctcacc
    14581 caaacggcta aataagtcgc gggcataagg catattttca tcaacaagga ttttcacgtt
    14641 tgtgttacct gtatgagacg agagttaacc ggacaagtgt gccataatct cgcggccagg
    14701 catacttgcg aagatttcag gtataaggat acgtaatgat acaacctatt tccggccctc
    14761 ctcctgggca accaccaggt cagggagata acctgccgtc tggcgcgggc aatcagcctt
    14821 tatccagtca gcaacgtact tcgctggaaa gcttaatgac gaaagtgacc tcactgacgc
    14881 aacagcaaag agcagaactg tgggcgggta tcaggcacga tattggtctg tcgggagatt
    14941 caccgctgct ttcgcgtcac ttccctgccg ctgagcataa tctggcgcaa cgtctgctgg
    15001 ccgcgcaaaa aagccattct gcccgccagc ttttagcgca attaggggag tatttacgtc
    15061 tggggaataa tcgtcaggcg gtcacggatt atatccgtca taactttggt cagacgccgc
    15121 tgaatcagct ctcaccggag caattaaaaa ccattctcac cctattgcag gaagggaaga
    15181 tggttattcc gcaaccgcag cagcgcgagg cgaccgaccg tcctttatta ccggcggagc
    15241 acaatgcgct aaaacagctg gtgaccaaac ttacggcggc aacgggggaa cccagcaaac
    15301 agatctggca atcgatgctg gaactttccg gggtgaaaga tggcgagtta attccagcga
    15361 aactgtttaa ccatctggtg acctggctac aggcgcgtca gacgctaagc cagcaaaata
    15421 cgccgacgct ggaatcacta cagatggcgc taaaacaacc tttagatgcc agtgaactgg
    15481 cggcgttatc ggcatatatc cagcaaaaat atggcctttc tgcgcaatca tcgctttctt
    15541 ctgcccaggc cgaggatatt cttaatcagc tttatcaacg gcgggttaaa gggattgatc
    15601 cgcgtgatat gcaaccgctg cttaatcctt ttccaccgat gatggacacg ttgcaaaata
    15661 tggcaacgcg tcccgtgctg tggatactgt tagtcgcgat tatcctgatg ctggtctggc
    15721 tggttcgtta accccgacga aatgacagta tcgtgacaat aatacccagc accgcagaga
    15781 tcgccccggc aagaaatacc gaagagtaac caaacgtggt cgccagcatt cccgccagcg
    15841 gcccggagac gccgagggcg atatcctgaa acgcggcgta accgcccagt gcggtgccgc
    15901 gaacttgtga ggggacgcgt ttaaccacct ccacgcccag cgcaggaaag ataagcgaac
    15961 atccggctcc ggttaacgcc gcgcccgcta atgcgaccca tgcacctggg gcttgccaga
    16021 gcagcaacaa gcccaccgtt tctacaagca gagagacaat cgccactttc acgccgccaa
    16081 aacggtccgg catccagcca aacatgacgc gcatcacgac aaatgcgccg ccaaacgcgg
    16141 taagagtaaa gcccgccatc gcccatcctt tgctggcaaa gtagagcgaa acgaaagtcc
    16201 cgataaccgc aaaaccaacg ccttgtagtg ccagccctaa ccctggtttc cagataagcc
    16261 cgacaacgct ccacagcgat ggacgttctc ccgccagggc cggtactttg cgcactgtgc
    16321 cgttacaggc ccacgccagt aagggtaata ccattgtggt gatcgccagt gcggcaaaac
    16381 cgtaatggct atgaatcaac aggccaagcg gcgcaccaac agcgagggca ccgtaaatcg
    16441 ccattccgtt ccatgacatc actttgccag agtgttttgc ccctacgatg cctaatcccc
    16501 aggtcagagc gcctgtcagt aactggcttt caccaaagcc aagaatcaaa cgcccgacga
    16561 ccaacagggc aaatttcaac ggtgcggaga caggcaaaat cgccgccagc agcaacgcgc
    16621 cgccagccag accacaagct aacatcccct gaagcgccga acgttttgca ccatattgat
    16681 cggccagtcg cccggcatag ccacgcgtca gcaccgtagc cagaaactga atcccgacgg
    16741 caatcccgac catggtattg ccatagccca gatcatgatg aacaaacagc gggataaccg
    16801 gcaacggcag ccctacggtc atgtaggtga gaaaaaccgc aaaagcgatg cggaagagcg
    16861 aaaaattggc agaagatcgt gtttcggttt ggcttacagc agtcatgcat tactccagaa
    16921 tgcagcgcaa ggcgaggagt atccccgtct catctctctg gtttcagggt tacagtgcgt
    16981 tggcaggatt taacgcgtac gtcttttcag aaggaaatcg acaaagcggg aagtttgcct
    17041 ggaactggcg gcgattgtca atgatgtgaa aaagggaacc atcaggttcc cttttgcgtt
    17101 agtgccggag gccgcattgg cgcgtaacgt cggatgcgac gctggcgcgt cttatccgac
    17161 ctactccgac tactccgact actccgacct actgcgaatt aatctttcag cttgcgcatt
    17221 accagcgtgg cgttggtgcc gccgaagccg aagctgttag acataacggt ggtcagttcg
    17281 cgatcggtcg tttcggtcac gatgttcaga cctgccgcct gctcgtccag ctcttcaatg
    17341 ttgatgctcg gggcgataaa gccgtgttcc agcatcagca gagagtagat agcttcctgt
    17401 acgccagcag cgcccagaga gtgaccggtc atggctttgg ttgcagaaat cgccgggctc
    17461 ttatcgccga acacttcacg gatagctgcc agttctttca cgtcgccaac cggagtcgaa
    17521 gtaccatgag agttcaggta atcgattggg gtatcaacgc cgtgcatcgc catcttcatg
    17581 cagcgtactg cgccttcgcc agacggagca accatgtctg caccatcaga ggttgcgccg
    17641 tagccaacga tttcagcata gatgtgagca ccacgcgcca gcgcgtgttc cagctcttca
    17701 accactacca taccgccgcc gccagcgata acgaaaccgt cacggtgagc gtcgtaagta
    17761 cgggaggctt tttccggggt gtcgttgtat ttagtagaca gcgcacccat cgcgtcgaat
    17821 tcgcaggcca tttcccagca cagctcttcg ccgccgccag caaacacgat gtcctgtttg
    17881 cccagttgga tctgctctac tgcgttaccg atacagtgtg cggaagtcgc acacgcggag
    17941 ctgatggagt agttaacgcc atgaatttta aacggcgtgg cgaggcaggc agaaacgccg
    18001 gatgccatcg ctttggtgac cacatacggg ccaaccgctt tcaggccgcg cgggccgcgc
    18061 attgcgtcag cgccgaatac ctggaaacgc ggggaaccgc cgccagaacc tgcaatcagg
    18121 ccaacgcgtg ggttattctg gtaagcttcc ggagaaaggc ccgtatctgc gattgcctgc
    18181 tccatagaaa ggaatgcata aatggatgcg tcgctcataa agcgcacaac tttgcggtca
    18241 atgaggccag tggtatccag ttttacgttg ccccagacgt ggctacgcat gccggaatcc
    18301 ttcagctcct gagagaaagt gatccctgaa cgtccttcac gcagagatgc caggacttcc
    18361 tgctggttat taccgatgct ggaaacaatg cccaggccag taatcactgc acgtttcatt
    18421 caatacctct gtaagtcgca catagagtaa gtttcgaatg cacaatagcg tacacttgta
    18481 cgccgaacaa gtccgatcag ccatttaata gagaaatttg cgcagcctta cacacatcgc
    18541 taagatcgag ccaccgcctg taagacgagt aacttacgtg aaacactact ccatacaacc
    18601 tgccaacctc gaatttaatg ctgagggtac acctgtttcc cgagattttg acgatgtcta
    18661 tttttccaac gataacgggc tggaagagac gcgttatgtt tttctgggag gcaaccaatt
    18721 agaggtacgc tttcctgagc atccacatcc tctgtttgtg gtagcagaga gcggcttcgg
    18781 caccggatta aacttcctga cgctatggca ggcatttgat cagtttcgcg aagcgcatcc
    18841 gcaagcgcaa ttacaacgct tacatttcat tagttttgag aaatttcccc tcacccgtgc
    18901 ggatttagcc ttagcgcatc aacactggcc ggaactggct ccgtgggcag aacaacttca
    18961 ggcgcagtgg ccaatgccct tgcccggttg ccatcgttta ttgctcgatg aaggccgcgt
    19021 gacgctggat ttatggtttg gcgatattaa cgaactgacc agccaactgg acgattcgct
    19081 aaatcaaaaa gtagatgcct ggtttctgga cggctttgcg ccagcgaaaa acccggatat
    19141 gtggacgcaa aatctgttta acgccatggc aaggttggcg cgtccgggcg gcacgctggc
    19201 gacatttacg tctgccggtt ttgtccgccg cggtttgcag gacgccggat tcacgatgca
    19261 aaaacgtaag ggctttgggc gcaaacggga aatgctttgc ggggtgatgg aacagacatt
    19321 accgctcccc tgctccgcgc cgtggtttaa ccgcacgggc agcagcaaac gggaagcggc
    19381 gattatcggc ggtggtattg cctgcgcgtt gttgtcgctg gcgctattac ggcgcggctg
    19441 gcaggtaacg ctttattgcg cggatgaggc ccccgcactg ggtgcttccg gcaatcgcca
    19501 gggggcgctg tatccgttat taagcaaaca cgatgaggcg ctaaaccgct ttttctctaa
    19561 tgcgtttact tttgctcgtc ggttttacga ccaattaccc gttaaatttg atcatgactg
    19621 gtgcggcgtc acgcagttag gctgggatga gaaaagccag cataaaatca cacagatgtt
    19681 gtcaatggat ttacccgcag aactggctgt agccgttgag gcaaatgcgg ttgaacaaat
    19741 tacgggcgtt gcgacaaatt gcagcggcat tacttatccg caaggtggtt ggctgtgccc
    19801 agcagaactg acccgtaatg tgctggaact ggcgcaacag cagggtttgc agatttatta
    19861 tcaatatcag ttacagaatt tatcccgtaa ggatgactgt tggttgttga attttgcagg
    19921 agatcagcaa gcaacacaca gcgtagtggt actggcgaac gggcatcaaa tcagccgatt
    19981 cagccaaacg tcgactctcc cggtgtattc ggttgccggg caggtcagcc atattccgac
    20041 aacgccggaa ttggcagagc tgaagcaggt gctgtgctat gacggttatc tcacgccaca
    20101 aaatccggcg aatcaacatc attgtattgg tgccagttat catcgcggca gcgaagatac
    20161 ggcgtacagt gaggacgatc agcagcagaa tcgccagcgg ttgattgatt gtttcccgca
    20221 ggcacagtgg gcaaaagagg ttgatgtcag tgataaagag gcgcgctgcg gtgtgcgttg
    20281 tgccacccgc gatcatctgc caatggtagg caatgttccc gattatgagg caacactcgt
    20341 ggaatatgcg tcgttggcgg agcagaaaga tgaggcggta agcgcgccgg tttttgacga
    20401 tctctttatg tttgcggctt taggttctcg cggtttgtgt tctgccccgc tgtgtgccga
    20461 gattctggcg gcgcagatga gcgacgaacc gattccgatg gatgccagta cgctggcggc
    20521 gttaaacccg aatcggttat gggtgcggaa attgttgaag ggtaaagcgg ttaaggcggg
    20581 gtaatctgct ctcgcagtgt ttgccggatg cggcgtgaac gccttatccg acctacgtgt
    20641 gacgtgtagg cctgataaga cgcgataagc gtcgcatcag gcatggtgct ccagacgccg
    20701 caacttactg ctgtgacgcc tgctgaaaca ggttttccca catatcggtc accagcgcct
    20761 ggtcacgcgg cgacaattca ccggcaccaa tggctttttc cagactctgg ctaacggtcg
    20821 tatgcaccgc ctgagcggag tggtcatcac cactttccag ttctgcgatg gctaatgtca
    20881 ggtggccacg caaataccca ctggcaaaca actcatcatc actggcatgg tcaatcatgc
    20941 cgtcgattaa tgccagaatg cgtgattcaa actccgcgat catcttcttt cctcattgta
    21001 aaacgtggca ccggcttcag ttgagcgctt ccggccacgg gaactgttcc gccgtaagtt
    21061 ccagcgtgtg ataataattt tgtagtgctt taatgaagcg tgccggacgc tcgggaatgc
    21121 catttgtcag ataatccatc acctgcgcat gtacccgccg ttgaaacacc acacgatccg
    21181 gttcgaagtc gccttccaga ttgtcgcaac tgacgttaaa cggatatccc gccgccacac
    21241 agaacaacca gtcgagtgcc tgcggcttca cttcaacacc ttcaaactgg ctttgcgttt
    21301 gggcatcacg cccatccggg caataccagt agccgaaatc aaccagctca cggcgcgctt
    21361 ttccggcaat acaccagtgc gaaatctcat gaattgcgct ggcataaaag ccgtgggcaa
    21421 agacaattcg gttatacggt acttccgcat cagcaggaag atagatcggt tcgtcgtcgc
    21481 ctttaatcag acgggtatta aattcatcgg caaagcagct attaaaaatt tcaatcaact
    21541 gctcatagtg gtgtgtactg ttcattagtt catccccaac cagtggagga tctcctgtcc
    21601 gtggctatcg taaagtaatt tggcactcat caccgccgag acgataacga tcatcgggcg
    21661 gatcagtttt tgtcctttgc tcagcaccag tcttgaaccc atgcgcgcgc cgaggaactg
    21721 ccccaccagc atgacaaagc ccgtcgccca aatcactttg ccgccgagaa taaacagcag
    21781 cagaccgcca atgtttgacg ttgcgttgag taatttggcg tgagccgtgg ctttggcgag
    21841 gttgaatccg cacagcgtaa cgaaggccag cgcgtaaaac gatccggcag ccgggccaaa
    21901 gaatccgtca taaaaaccga cgcagccacc ggcaattaac gcgaagggta aaccgtacat
    21961 ccggcgctgg cgatcttctt cacccagctt tggcatcagc aagaaataga ggccgataca
    22021 aattaccaga atgggcaaaa tctgccgtaa gacatcagcc tgaacgtatt gcaccagcag
    22081 tgcgccgctc attgagccga caaaggtcat ggcgatattg agtttctgat cgcttaaact
    22141 aaccactttg cggcgaataa agtagatagt ggcggaaata gagccgccgc aggcttgcag
    22201 tttattggtt gccagcgcgt tagcgggaga cattcccgca gccatcaatg ccggaatggt
    22261 gagtaaccca ccgccaccgg caatcgagtc gataaatccc gccagcatgg cgacaaaaaa
    22321 gagaactccc agcaacagcg gggaaaccat aaacaggcta ttaaacgttt ccattagatc
    22381 acgtgctcat ccagtagcgc ctggcaggaa ggcggcaacg gaggcggtgt cttcttctca
    22441 ggctttgttg ttcctggttt tggaggtgca aaccagcttt gcagttctgc cccgcaacca
    22501 tcgcctggtg gcggtaaagg ttgatcttca cactccagac tatcggcagg gcaacgtaat
    22561 cgtacatgca tatgcgcgcg atgctggaac cagggtcgca ctttgcgcaa ccagtcgcga
    22621 tcggtgcccg catcaaggca aagttgttgt ttaatcgccg gattaacaaa aatgcgcgtg
    22681 acgtctttgt cctgggcggc gagtttgatc aagctgaaaa tttctggctt ccacagcgtg
    22741 gagacaacgt gtttaccgtc gcgggaaact aagtccagtg cttgcgggcg caagagctgc
    22801 gcggaggtcc agcgagtttt cggcagttgc agaaagatat cgacatccag tccggtctgg
    22861 tggctggcat gaccgccgtt gaaacgccca ccagcgggca tccccatatc gccaatcagc
    22921 accgtaccca tgcccagatt gctcacctgg ctactcagac gctggataaa catcaccaga
    22981 tccgggtgac cgaaatagcg acgctgatcg gtacgcatga cctgataatg ttcggactgt
    23041 atcggcaacg tgtcagcgcc gacaatacag ccattagaaa aactgcctat cgattgtgcg
    23101 ctacccggca caggttgggt tattttttgc cacggcgtcg ctgccaagct agcgctactg
    23161 gcaagcagag ccagcagcgc aatcgcggtt ttgttcattt tttaccagcg tggaatatca
    23221 gtcttcacat cggcattttg cgcccgctgc cgtaacaggt gatccattaa aacgatcgcc
    23281 agcatcgctt cagcgatcgg cactgcacgg atcccgacac agggatcgtg acggcctttg
    23341 gtgatcatct caacttcttc gccaaagcgg ttaatagtgc gccccggcac ggtaatgctg
    23401 gaggtcggtt tcagcgccat atgagcaatg atttgctgcc cgctgctgat accgccgaga
    23461 atgccgcccg catggttgct ctggaaaccg tctttggtga tttcgtcgcg gttctggctg
    23521 ccgcgcagcg ccactacgtc aaagccgtcg ccaatttcca cgcctttcac cgcgttgatg
    23581 ctcatcagcg catgggcgat gtcggcatcc aggcggtcaa ataccggctc gccaagtccg
    23641 gcggggacgc cactggcaac aacggtgact ttcgcgccga tggagtcgcc ctcttttttc
    23701 agcgcgcgca tcagttcatc taacgcgtcg attttgtccg gatccgggca gaagaacgga
    23761 ttttgttcaa ccagcgacca gtctttgatt tccagcggaa tgtcgcccat ctgggtcaag
    23821 cagccgcgga tttcaatacc aaatttctcg gcgagatatt ttttggcaat cgcccctgcc
    23881 gccacgcgca tggcagtttc gcgggcggaa gaacgtccac cgccgcgata atcgcgcaga
    23941 ccgtattttt gttcgtaggt gtaatcagca tggcctgggc ggaaaacgtc tttaattgcg
    24001 ctgtaatcct gagagcgctg gtcagtgttt tcgatcaaca agccaatgct ggtgccagta
    24061 gtaacgcctt caaaaacacc ggagagaatt ttgacctgat ccggctcgcg gcgctgggtg
    24121 gtatagcgcg atgtcccagg gcgacgacgg tcgaggtcat gttgcaggtc cgcttccgtc
    24181 agcagaatgc ctggcggaac accatcgacg atgcagccga gcgccagccc atgcgattcg
    24241 ccgaaggtgg ttacgcgaaa gagttgtcca attgtgtttc cagccatcac ggctccgtta
    24301 ttgttgtgtt tgcgtgttta cttaatcttt ataaatcgcg aaatattcac gggccgccag
    24361 cagctgctct ttggtgagca taaacacacc atcgccgccg ttatcaaact ccagccaggt
    24421 gaacggaaca tccggatatt gttccataag atgtaccatg ctgttgccga cttcacaaat
    24481 caacacgcca tcatcagcaa ggtaatctgc cgcgtttcca agaatgcgac gcgtcagttt
    24541 aaggccgtcg gtgccagatg ccaggcccag ttccggctcg tgacggtatt cgtttggcag
    24601 gtcggacata tcttccgcgt cgacatacgg cgggttagtg acaatcagat cgtactgcac
    24661 tttcggcaag tcgcggaaca gatcggaacg aatcggaatg acgttgtgga tcagaccgtg
    24721 ttcttcgatg ttctgttcag caaccgccag cgcgtcggga gagatatcca ccgcgtcgac
    24781 ttctgcatcc gggaaggcat aagcacaggc aatggcgatg cagccgctac cggtacacat
    24841 atctaaaata tgctgcggtt gtttgctgat gagtccggca aatttattgt tgatcagttc
    24901 accaatcggc gagcgcggca ccagcacgcg ttcatcgacg taaaattcat gaccgcagaa
    24961 ccaggctttg ttggtcaggt aagccaccgg aatgcgctcg ttgacgcggc ggatcacgcg
    25021 ttcaacaata cgatgttttt cgctggaggt cagacgcgcg gtgcgcatat cttccgggat
    25081 atccagcggc aggtagagcg atggtaacac cagctgtacg gcttcatccc acgggttatc
    25141 ggtgccgtga ccgtaccaga tatttgccgc gctgaagcgg ctcactgacc agcgcaacat
    25201 gtcctgaatg gtttgcagct catttactgc ttcatcaacg aaaattttat ccacgtattc
    25261 ctccagggca tgatcgcaat aatttcggcg gctagtttgc catgaagatg acgataaatc
    25321 agcattcacg cgcggtgagt gaggaaaaat acgtttaaaa cgatcgattg tgctacgagt
    25381 cgggtaaact gtaggaaaat tagaaataga gacagataaa tgaaaaagaa aacaacactt
    25441 agcgaggagg accaggctct gtttcgccag ttgatggcgg ggactcgcaa gattaagcag
    25501 gacacgattg tccaccgacc gcagcgtaaa aaaatcagcg aagtgccggt gaaacgcttg
    25561 atccaggagc aggctgatgc cagccattat ttctccgatg agtttcagcc gttattaaat
    25621 accgaaggtc cggtgaaata tgttcgcccg gatgtcagcc atttcgaggc gaagaaactg
    25681 cgccgcggcg attattcacc ggaattgttt ttggatttac acggtctgac gcagctgcag
    25741 gccaagcagg aactgggcgc gttgattgcc gcctgtcgcc gcgaacatgt gttttgtgcc
    25801 tgcgtgatgc atgggcacgg gaagcatatt ttgaagcaac aaacaccgct gtggctggca
    25861 caacatccgc atgtgatggc atttcaccag gcaccgaaag agtacggcgg tgatgcggct
    25921 ttgttggtgt tgattgaagt ggaagagtgg ttgccgccgg agttgccctg aggagttgag
    25981 cgtgttgtgg caggagcgaa tgaccctgcc aggtgagaaa aggtgcgcta atacatattc
    26041 agtatgtaag tgaatcggca ggtagaatct atgggctgtc gagatgtcgt gtccacgcgt
    26101 agcttcatat catgcagttg cctggacgta atcggttgcg gctcaggcgt caccgtcact
    26161 ttggcattat cacagccgga agtcgagaag gtcatctgct gtgcgataaa acggcagtag
    26221 acaccacgct catcaaaatt attcccgtta cacagtttgc cattttccat caggaaagtg
    26281 ggcagtgttt gctcaataac accacctgtt gactgcaacc tgacgacttt gttatgtaca
    26341 acataatttt cattccagga aacatcatac gatgccaggg gcaccgccgg acatgaagaa
    26401 ctcaccttcg ttgggccaat atagtcagga aaatcatcat catacgtttt agcgaaggga
    26461 tctctactct taacaaacga cgacacaatc cacggacaac catgtaaatt cccatcgtaa
    26521 taaacaaaca tctttaattc attacatgtc catcccgttt tggtctggct atcatactgc
    26581 tctaatccag gacaggctga catggatacc ctgctgtccg aaattttcga catagatggt
    26641 tgagtagaac tatcgccagt ccacgaaact aaatccggct gtgaattggg catgaatgta
    26701 gccttaaata tagcgtaatt aactgaatct ggcgtcgcta taatcagatg aaactcaaac
    26761 tctgtagact ggccccctga atctccagac aaccagtatc acttaaa
//
LOCUS       DADMHC010000038        25651 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.038, whole genome shotgun sequence.
ACCESSION   DADMHC010000038 DADMHC010000000
VERSION     DADMHC010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 25651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25651
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.038"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..318
                     /locus_tag="JNZ57_001329"
     CDS             <1..318
                     /locus_tag="JNZ57_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis acetyltransferase
                     WcaF"
                     /protein_id="HAY8827606.1"
                     /translation="AWVGDDVNLYTLGEITIGAHSVISQKSYLCTGSHDHASRHFTIN
                     ATPIVIGEKCWLATDVFVAPGVTIGDGTVVGARSSVFKSLPANRVCRGNPAVVIRERV
                     ETE"
     gene            345..1466
                     /gene="gmd"
                     /locus_tag="JNZ57_001330"
     CDS             345..1466
                     /gene="gmd"
                     /locus_tag="JNZ57_001330"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HAY8827607.1"
                     /translation="MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERV
                     DHIYQDPHTCNPKFHLHYGDLSDTSNLTCILREVQPDEVYNLGAMSHVAVSFESPEYT
                     ADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA
                     KLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYL
                     GNMDSLRDWGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRF
                     EGSGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPAKAHEKLGWK
                     PEITLREMVSEMVANDLEAAKKHSLLKSHGYDVAIALES"
     gene            1469..2435
                     /gene="fcl"
                     /locus_tag="JNZ57_001331"
                     /gene_synonym="wcaG"
                     /gene_synonym="yefB"
                     /pseudo
     CDS             1469..2435
                     /gene="fcl"
                     /locus_tag="JNZ57_001331"
                     /gene_synonym="wcaG"
                     /gene_synonym="yefB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310884.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
     gene            2438..2917
                     /locus_tag="JNZ57_001332"
     CDS             2438..2917
                     /locus_tag="JNZ57_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707946.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose mannosyl hydrolase"
                     /protein_id="HAY8827608.1"
                     /translation="MFLRQEDFATVVRSTPLVSLDFIVENSRGEFLLGKRTNRPAQGY
                     WFVPGGRVQKDETLEAAFERLTMAELGLRLPMTAGQFYGVWQHFYDDNFSGTDFTTHY
                     VVLGFRFRVAEEELLLPDEQHDDYRWLTPDALLASDDVHANNRAYFLAEKRAGVPGL"
     gene            2914..4137
                     /gene="wcaI"
                     /locus_tag="JNZ57_001333"
     CDS             2914..4137
                     /gene="wcaI"
                     /locus_tag="JNZ57_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis fucosyltransferase
                     WcaI"
                     /protein_id="HAY8827609.1"
                     /translation="MKILVYGINYSPELTGIGKYTGEMVEWLAAQGHEVRVITAPPYY
                     PQWQVGENYSAWRYKREEGAATVWRCPLYVPKQPSTLKRLLHLGSFAASSFFPLMAQR
                     RWKPDRIIGVVPTLFCTPGMRLLAKLSGARTVLHIQDYEVDAMLGLGLAGKGKGGKVA
                     QLATAFERSGLHNVDNVSTISRSMMNKAVEKGVAAENVIFFPNWSEIARFQHVADADV
                     AALRNQLGLPDNKKIILYSGNIGEKQGLENVIEAADRLRDEPLIFAIVGQGGGKARLE
                     KMAQQRGLRNMQFFPLQSYDALPALLKMGDCHLVVQKRGAADAVLPSKLTNILAVGGN
                     AVITAEAHTELGQLCETFSGIAVCVEPESVEALVAGIRQALLLPKHNTVAREYAERTL
                     DKENVLRQFIHDIRG"
     gene            4140..5576
                     /gene="cpsB"
                     /locus_tag="JNZ57_001334"
     CDS             4140..5576
                     /gene="cpsB"
                     /locus_tag="JNZ57_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate guanyltransferase"
                     /protein_id="HAY8827610.1"
                     /translation="MSQSKLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQTT
                     ICRLNGVECESPVVICNEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAALAA
                     KRHSPDSDPLMLVLAADHVIADEDAFRAAVRNAMPYAEAGKLVTFGIVPDLPETGYGY
                     IRRGEVSAGEQDTVAFEVAQFVEKPNLETAQAYVASGEYYWNSGMFLFRAGRYLEELK
                     KYRPDILDACEKAMSAVDPDLDFIRVDEEAFLACPEESVDYAVMERTADAVVVPMDAG
                     WSDVGSWSSLWEISAHTAEGNVCHGDVINHKTENSYVYAESGLVTTVGVKDLVVVQTK
                     DAVLIADRNAVQDVKKVVEQIKADGRHEHRVHREVYRPWGKYDSIDAGDRYQVKRITV
                     KPGEGLSVQMHHHRAEHWVVVAGTAKVTIDGDIKLLGENESIYIPLGAKHCLENPGKI
                     PLDLIEVRSGSYLEEDDVVRFADRYGRV"
     gene            5678..7048
                     /gene="cpsG"
                     /locus_tag="JNZ57_001335"
     CDS             5678..7048
                     /gene="cpsG"
                     /locus_tag="JNZ57_001335"
                     /EC_number="5.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase CpsG"
                     /protein_id="HAY8827611.1"
                     /translation="MKKLTCFKAYDIRGKLGEELNEDITWRIGRAYGEFLKPKTIVLG
                     GDVRLTSETLKLALAKGLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPM
                     DYNGMKLVREGARPISGDTGLRDVQRLAEANDFPPVDETKRGRYRQINLRDAYVDHLF
                     CYINVKNLTPLKLVINSGNGAVGPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGIP
                     NPLLPECRDDTRNAVIKHGADMGIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLE
                     KNPGAKIIHDPRLSWNTVDVVTAAGGTPVMSKTGHAFIKERMRKEDAIYGGEMSAHHY
                     FRYFAYCDSGMIPWLLVAELVCIKGKTLGELVRDRMAAFPASGEINSKLAQPVEAINR
                     VEQHFSREALAVDRTDGISMTFADWRFNLRSSNTEPVVRLNVESRGDVPLMEARTRTL
                     LTLLNE"
     gene            7103..8497
                     /gene="wcaJ"
                     /locus_tag="JNZ57_001336"
     CDS             7103..8497
                     /gene="wcaJ"
                     /locus_tag="JNZ57_001336"
                     /EC_number="2.7.8.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate glucose
                     phosphotransferase"
                     /protein_id="HAY8827612.1"
                     /translation="MTNLKKRERAKTNASLISMVQRFSDITIMFAGLWLVCEVSGLSF
                     LYMHLLVALITLVVFQMLDGITDFYRSWRGVRATTEFALLLQNWTLSVIFSAGLVAFN
                     NDFDTQLKIWLAWYGLTSIGLVACRSCIRIGAGWLRNHGYNKRMVAVAGDLAAGQMLM
                     ESFRNQPWLGFEVVGVYHDPKPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMQMCDGA
                     RVKKLVHQLADTTCSVLLIPDVFTFNILHSRLEEMNGVPVVPLYDTPLSGVNRLIKRA
                     EDIVLATLILLLISPVLCCIALAVKLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKVME
                     NDKVVTQATQNDPRVTKVGNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYR
                     QLIEGYMLRHKVKPGITGWAQINGRRGETDTLEKMEKRVEFDLEYIREWSVWFDIKIV
                     FLTVFKGFVNKAAY"
     gene            8499..9977
                     /gene="wzxC"
                     /locus_tag="JNZ57_001337"
     CDS             8499..9977
                     /gene="wzxC"
                     /locus_tag="JNZ57_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M-antigen undecaprenyl disphosphate flippase"
                     /protein_id="HAY8827613.1"
                     /translation="MSLREKTISGAKWSAIATVIIIGLGLVQMTVLARIIDNHQFGLL
                     TVSLVIIALADTLSDFGIANSIIQRKEISHLELTTLYWLNVGLGLVVCVAVFLLSDAI
                     GDVLNNPDLAPLIKTLSLAFVVIPHGQQFRALMQKELEFNKIGMIETSAVLAGFTFTV
                     VSAHFWPLAMTAILGYLVNSAVRTLLFGYFGRKIYRPGLHFSLASVAPNLRFGAWLTA
                     DSIINYLNTNLSTLVLARILGAGVAGGYNLAYNVAVVPPMKLNPIITRVLFPAFAKIQ
                     DDTEKLRVNFYKLLSVVGIINFPALLGLMVVSNNFVPLVFGEKWNSIIPVLQLLCIVG
                     LLRSVGNPIGSLLMAKARVDISFKFNVFKTFLFIPAIVIGGQMAGAIGVTLGFLLVQI
                     INTILSYFVMIKPVLGSSYRQYILSLWLPFYLSLPTLVVSYALGIVLKGQLALGMLLA
                     VQIATGVLAFVVMIVLSRHPLVVEVKRQFCRSEKMKMLLRAG"
     gene            10241..11521
                     /gene="wcaK"
                     /locus_tag="JNZ57_001338"
     CDS             10241..11521
                     /gene="wcaK"
                     /locus_tag="JNZ57_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis pyruvyl transferase
                     WcaK"
                     /protein_id="HAY8827614.1"
                     /translation="MKLLILGNHTCGNRGDSAILRGFLDAINILNPHAEVDVMSRYPV
                     SSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSRVTDTGKLRNI
                     AIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGP
                     FQDEQFNQLANYVFGHCDALILRESVSLDLMKRSNITTAKVEHGVDTAWLVDHHTEDF
                     TASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQV
                     IALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLEMGKILGACELTVGT
                     RLHSAIISMNFSTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQ
                     LPELNTRLNEAVSRERQAGMQMVQSVLERIGEAK"
     gene            11518..12738
                     /gene="wcaL"
                     /locus_tag="JNZ57_001339"
     CDS             11518..12738
                     /gene="wcaL"
                     /locus_tag="JNZ57_001339"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaL"
                     /protein_id="HAY8827615.1"
                     /translation="MKVGFFLLKFPLSSETFVLNQITAFIDMGFEVEIVALQKGDTQN
                     THAAWTKYNLAARTRWLQDEPTGKVAKLRHRASQTLRGIHRKNTWQALNLKRYGAESR
                     NLILSAICGQVATPFHADVFIAHFGPAGVTAAKLRELGVIRGKIATIFHGIDISSREV
                     LNHYTPEYQQLFRRGDLMLPISDLWAGRLQKMGCPREKIAVSRMGVDMTRFSPRPVKP
                     PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQ
                     LEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVST
                     LHSGIPELVEADKSGWLVPENDARALAQRLVAFSQLDTDELAPVVKRAREKVEHDFNQ
                     QVINRELASLLQAL"
     gene            12749..14143
                     /gene="wcaM"
                     /locus_tag="JNZ57_001340"
     CDS             12749..14143
                     /gene="wcaM"
                     /locus_tag="JNZ57_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis protein WcaM"
                     /protein_id="HAY8827616.1"
                     /translation="MPFKKLSRRTFLTASSALAFLHTPFARALPARQSVNINDYNPHD
                     WIASFKQAFSEGQTVVVPGGLVCDNINTGIFIPPGKTLHILGSLRGNGRGRFVLQDGS
                     QVTGEEGGSMNNITLDVRGSDCTIKGLAMSGFGPVTQIYIGGKNKRVMRNLTIDNLTV
                     SHANYAILRQGFHNQIIGANITNCKFSDLQGDAIEWNVAINDSDILISDHVIERINCT
                     NGKINWGIGIGLAGSTYDNNYPEDQAVKNVVVANITGSDCRQLIHVENGKHFVIRNIK
                     ARNITPDFSKKAGIDNATVAIYGCDNFVIDNIEMINSAGMLIGYGVIKGKYLSIPQNF
                     RVNNIQLDNTHLAYKLRGIQISAGNAVSFVALTNIEMKRASLELHNKPQHLFMRNIKV
                     MQKSSVGPALSMNFDMRKDVRGVFMAKKETLLSLANVHAVNERGQSSVDIDRINHHIV
                     NVEKINFRLPERRE"
     gene            14318..15211
                     /gene="galF"
                     /locus_tag="JNZ57_001341"
     CDS             14318..15211
                     /gene="galF"
                     /locus_tag="JNZ57_001341"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalF"
                     /protein_id="HAY8827617.1"
                     /translation="MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEI
                     VAAGIKEILLVTHASKNAVENHFDTSYELESLLELRVKRQLLAEVQSICPPGVTIMNV
                     RQGEPLGLGHSILCARPAIGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRS
                     QVLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLS
                     ADIWPELERTQPGAWGRIQLTDAIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKY
                     GLRNLKEGAKFRKGIEKLLSE"
     gene            15583..16668
                     /gene="rfbB"
                     /locus_tag="JNZ57_001342"
     CDS             15583..16668
                     /gene="rfbB"
                     /locus_tag="JNZ57_001342"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HAY8827618.1"
                     /translation="MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA
                     DVSDSERYVFEHADICDAAAMARIFSQHQPDAVMHLAAESHVDRSITGPAAFIETNIV
                     GTYVLLEAARNYWSALDSDKKNSFRFHHISTDEVYGDLPHPDEVNNKEKLPLFIETTA
                     YAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEG
                     KMLPIYGKGDQIRDWLYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDL
                     LDEIVPKEKSYREQITYVADRPGHDRRYAINAEKIGRELGWKPQETFESGIRKTVEWY
                     LANAKWVENMKSGAYQSWIEQNYEGRQ"
     gene            16668..17567
                     /gene="rfbD"
                     /locus_tag="JNZ57_001343"
     CDS             16668..17567
                     /gene="rfbD"
                     /locus_tag="JNZ57_001343"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HAY8827619.1"
                     /translation="MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPE
                     GVAETVRSIRPDIIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHY
                     STDYVFPGTGEIPWQETDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGN
                     NFAKTMLRLAKEREELAVINDQFGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAS
                     GTTTWYDYAALVFEEAREAGIPLALNKLNAVPTTAYPTLARRPHNSRLDTEKFQQNFA
                     LVLPDWQIGVKRMLNELFTTTAI"
     gene            17625..18503
                     /gene="rfbA"
                     /locus_tag="JNZ57_001344"
     CDS             17625..18503
                     /gene="rfbA"
                     /locus_tag="JNZ57_001344"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HAY8827620.1"
                     /translation="MKTRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTL
                     MLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQASPDGLAQAFIIGEEFIGG
                     DDCALILGDNIFYGHDLPKLMDAAVNKESGATVFAYHVNDPERYGVVEFDNNGTAISL
                     EEKPLEPKSNYAVTGLYFYDNDVVEMAKNLKPSARGELEITDINRIYMEQGRLSVAMM
                     GRGYAWLDTGTHQSLIEASNFIATIEERQGLKVSCPEEIAYRKGFIDAEQVKVLAEPL
                     KKNAYGQYLLKMIKGY"
     gene            18508..19053
                     /gene="rfbC"
                     /locus_tag="JNZ57_001345"
     CDS             18508..19053
                     /gene="rfbC"
                     /locus_tag="JNZ57_001345"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001100791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HAY8827621.1"
                     /translation="MNVIKTEIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVE
                     FVQDNHSKSSKGVLRGLHYQLEPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVN
                     LSAENKRQLWIPEGFAHGFLVLSETAEFLYKTTNYYHPISERGVKWDDPCIDIKWPLV
                     SSPLLSEKDKCYSWLTKQNEQ"
     gene            19043..20225
                     /gene="wzx"
                     /locus_tag="JNZ57_001346"
                     /pseudo
     CDS             19043..20225
                     /gene="wzx"
                     /locus_tag="JNZ57_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032167161.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="O149 family O-antigen flippase"
     gene            20209..21045
                     /locus_tag="JNZ57_001347"
     CDS             20209..21045
                     /locus_tag="JNZ57_001347"
                     /inference="COORDINATES: protein motif:HMM:NF016145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide pyruvyl transferase family
                     protein"
                     /protein_id="HAY8827622.1"
                     /translation="MGRIIEALYGISTELKERILNMGEKTVPVNYYTRHNNWGDQLNK
                     YLIEKITNKKVVKNNFKKLPHILAIGSVLSSASNKSIVWGSGFISKDAPLRETAPDIR
                     AVRGVLTRNKLQKDFSIDCPDVLGDPAVLLPLFYKAKHRSKKYKVGIIPHYKDKQRAV
                     VQDFLHKGCVLVDIQDDIEVFIDKINECEVVISSSLHGLIAADTYGIPNLWVSFGDQV
                     LGGDFKFLDYYSTTNNINPKMIRLDNDHKYSIDDLVRISRCNKFIRSSEELLEAFPRE
                     YI"
     gene            21076..22140
                     /gene="wzy"
                     /locus_tag="JNZ57_001348"
     CDS             21076..22140
                     /gene="wzy"
                     /locus_tag="JNZ57_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000961623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O149 family O-antigen polymerase"
                     /protein_id="HAY8827623.1"
                     /translation="MLVTILALFLFIQLLYLISYKRNFNTKSINDILSFIIFLFLIVL
                     FFFRNEDFGADTQNYLNEFDEYCSNPSGYIGVDYTYKYIFDLINFLMLDSCHISWLIW
                     IWPIFVIGCIFLAITIFRVDKIYIIALFSSFIGIELLTNALRQGFSIAVLLLSFCLFI
                     KRRYFLFLIAVTISFLFHQASILIVSIFIISRCSIRIVVPSIVVGVFLLFATNILDVV
                     PWVIEFKKLIYKYLPYADEDFIIRIISIINTLCLCVLYLIVMIKSHCKDKIINNIVIN
                     ATFVCCIASIVPYLGFRIIYGVYPLLLLLTYCSIRNYIGRVSSYNYLSLSICINIFIS
                     IMWLCGSSHMNKIPFVSIII"
     gene            22137..22958
                     /locus_tag="JNZ57_001349"
     CDS             22137..22958
                     /locus_tag="JNZ57_001349"
                     /inference="COORDINATES: protein motif:HMM:NF025025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HAY8827624.1"
                     /translation="MKKRSFGISVVVPVYNRKEKLIRAIDSVDTLSPHLVEIIVIDDC
                     SDLAPDTFLEKSNKYGVNVHIYRNKYNKGPQICRNIGIRRAKFNYIAFLDSDDYFCMG
                     KIDWLLNILKDEDIDFLYHAVNGCEKYNRISSYWFNTVGKFIHFRWFLIFLNPCVTPS
                     VVIKRKVCLFNPCLRYSEDYAYFLSYINSKTKVKYFESIYTTVPREIGTRGGISHNII
                     KMRKGEFYGKKNILRKRRNISNYIRFLISLGMACLRVFFDIVRKRYKVNNLFKDI"
     gene            23000..24082
                     /locus_tag="JNZ57_001350"
     CDS             23000..24082
                     /locus_tag="JNZ57_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000139178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HAY8827625.1"
                     /translation="MTEQFSEKKIDVVGIVGLPACYGGFESLVQNLVDYQSQNIKYNV
                     YCSRKKYKNTPKKYKRADLKYIPFDANGSSSILYDIYSLFLSLFNKVDVVLILGVSGC
                     VFLPIYRFFSSSKVIVNIDGLEWKRAKWKGIAKWYLKNSEKIAVKYSDVVVADNEAIA
                     KYVLKKYGLEAKIIAYGGDHSLVKKPISVIKEDYFFTVCRIEPENNIRMILEAFKNTT
                     HSLKIVGNWDSSLYGRRLKEEFGNYNNIEIIDPIYDSDILFNFRSLCRGYIHGHSAGG
                     TNPSLVEAMHFQIPIIAFDCDFNRFTTDNYAFYFKNKNELSFIVNDILNGNQNEQAEI
                     CAKKMKEIATKKYTWDTIAKMYEELY"
     gene            24166..25572
                     /gene="gndA"
                     /locus_tag="JNZ57_001351"
     CDS             24166..25572
                     /gene="gndA"
                     /locus_tag="JNZ57_001351"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HAY8827626.1"
                     /translation="MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIA
                     ENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGN
                     TFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIA
                     AVAEDGEPCVTYIGTDGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAQT
                     FTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEP
                     LSLITESVFARYISSLKDQRVAASKVLSGPQAQPAGDKAEFIEKVRRALYLGKIVSYA
                     QGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPY
                     FKQIADDYQQALRDVVAYAVQNGIPVPTFAAAVAYYDSYRAAVLPANLIQAQRDYFGA
                     HTYKRIDKEGVFHTEWLD"
BASE COUNT         6762 a         5542 c         6450 g         6897 t
ORIGIN      
        1 gcgtgggtcg gcgatgacgt caatttatat accctcggtg aaataaccat tggcgcacat
       61 tcggtgatat cgcaaaaaag ttatttatgc accgggagcc acgaccatgc aagtcgacat
      121 ttcaccataa acgccacgcc cattgtgatt ggcgagaaat gctggctggc aaccgatgtt
      181 tttgttgctc ctggcgtcac gatcggcgac ggcaccgtcg tgggtgcgcg aagcagtgtt
      241 tttaaatcgc ttccggcaaa tagagtttgt cgggggaatc ccgcagtggt gatacgcgaa
      301 cgcgttgaaa ctgaataaat tcaaaaaata cagaggaata agacatgtca aaagtcgctc
      361 tcatcaccgg tgtaaccgga caagacggtt cttacctggc agagtttctg ctggaaaaag
      421 gttacgaggt gcatggtatt aagcgtcgtg catcgtcatt caacaccgag cgcgtggatc
      481 atatttatca ggatccgcat acctgtaacc cgaaattcca tctgcattat ggcgacctga
      541 gtgatacctc caacctgacg tgtattttgc gtgaagtgca gccggatgaa gtgtacaacc
      601 tgggcgcaat gagccacgtt gcggtttctt ttgagtcacc ggaatatacc gcagacgttg
      661 atgcgatggg cacactgcgt ctgctggagg cgatccgctt ccttggtctg gaaaagaaaa
      721 cccgtttcta tcaggcttcc acttctgaac tgtacggtct ggtgcaggaa attccgcaga
      781 aagaaaccac gccgttctat ccgcgatctc catatgcggt cgccaagctg tatgcctact
      841 ggatcaccgt taactaccgc gaatcctacg gcatgtacgc ctgtaacggc attctcttta
      901 accatgaatc cccgcgccgt ggcgaaacct tcgttacccg caaaatcacc cgcgctatcg
      961 ccaatatcgc tcaagggctg gagtcgtgtc tgtacctcgg caatatggat tccctgcgtg
     1021 actggggcca cgccaaagac tacgtaaaaa tgcagtggat gatgctgcaa caggaacagc
     1081 cagaagattt cgttattgcc accggcgttc agtactccgt gcgtcagttc gtggaaatgg
     1141 cggcagcaca gctgggcatc aaactgcgct ttgaaggctc gggcgttgaa gagaagggca
     1201 ttgtggtttc cgtcaccggg catgacgcgc cgggcgttaa accgggcgat gtgattatcg
     1261 ccgttgaccc gcgttacttc cgtcctgctg aagtagaaac gctgctcggc gacccggcca
     1321 aagcgcacga aaagctgggc tggaaaccgg aaatcaccct cagagagatg gtatctgaaa
     1381 tggtggctaa tgacctcgaa gcggcgaaaa aacactctct gctgaaatct cacggctacg
     1441 acgtggcgat cgcgctggag tcataagcat gagtaaacaa cgtattttta tcgctggcca
     1501 tcgcgggatg gtcggttctg ccatcaagcg acagctcgaa cagcgcggtg atgtggaact
     1561 ggtattacgc acccgcgacg aactgaacct gctggacagc cgcgcggtgc atgatttctt
     1621 tgccagcgag cgcattgact aggtctatct ggcggcggcg aaagtgggcg ggattgtcgc
     1681 caacaacacg tatccggcgg atttcatcta ccagaatatg atgattgaga gcaacatcat
     1741 tcacgctgcg catcagaacg acgtgaacaa actgctgttt ctcggatcgt cctgcatcta
     1801 cccaaaactg gcaaaacagc cgatggcaga aggcgagctg ttacagggca cgctggagcc
     1861 gaccaacgag ccatacgcca ttgccaaaat cgccgggatc aaactgtgcg aatcttacaa
     1921 ccgccagtat ggatgcgatt atcgctctgt catgccgacc aacctgtacg ggccgcacga
     1981 caacttccat ccgaataatt cgcatgtgat ccccgcattg ctgcgccgct tccacgaggc
     2041 gacagcacag aatgcaccgg acgtggtggt gtggggccag cggtacgccg atgcgcgaat
     2101 ttctgcatgt cgatgatatg gcggtggcaa gcattcatgt catggagctg gcgcacgaag
     2161 tctggctgga gaacacccag ccgatgctgt cgcacattaa cgtcggcacg ggtgttgact
     2221 gcactatccg cgagctggcg caaaccatcg ccaaagtggt gggttacaaa ggccgggtgg
     2281 ttttcgatgc cagtaaaccg gatggcacac cgcgcaaact gctggatgtg acgcgcctgc
     2341 atcagcttgg ctggtatcac gaaatctcac tggaagcggg gcttgccagc acttaccagt
     2401 ggttccttga gaatcaagac cgctttcggg ggtaatgatg tttttacgtc aggaagactt
     2461 tgccacggta gtgcgctcca ctccgcttgt ctctctcgac tttattgtcg agaacagccg
     2521 cggcgagttt ctgcttggca aaagaaccaa ccgcccggca cagggttact ggtttgtgcc
     2581 gggagggcgc gtgcagaagg acgaaacgct ggaagccgca tttgagcggc tgacgatggc
     2641 ggaactgggg ctgcgtctgc cgatgacagc gggccagttt tacggtgtct ggcagcactt
     2701 ttatgacgat aacttctccg gcacggattt caccacgcac tatgtagtgc tcggttttcg
     2761 cttcagagtc gcggaagagg aactattact gccggatgag cagcatgacg attaccgctg
     2821 gctgacgccg gacgcgctgc tcgccagtga cgatgttcac gctaacaacc gcgcctattt
     2881 tctcgctgag aagcgtgccg gagtacccgg attatgaaaa tactggtcta cggcattaac
     2941 tactcgccgg agttaaccgg catcggcaaa tacaccggcg agatggtgga atggctggca
     3001 gcacaaggtc atgaggtgcg ggtcattacc gcaccgccgt actacccgca gtggcaggtg
     3061 ggcgagaact attccgcctg gcggtacaaa cgagaagagg gggccgccac ggtgtggcgc
     3121 tgcccgctgt atgtgccaaa acagccgagc accctgaaac gcctgttaca tctcggcagc
     3181 tttgccgcca gcagtttttt tcccctgatg gcgcaacgtc gctggaagcc ggatcgcatt
     3241 atcggcgtag taccaacgct gttttgcacg ccgggaatgc gcctgctggc gaaactctct
     3301 ggtgcgcgta ccgtgctgca tattcaggat tacgaagtag atgccatgct ggggctgggc
     3361 cttgccggaa aaggtaaagg cggcaaagtg gcacagctgg cgacagcctt cgaacgtagc
     3421 ggactgcata acgtcgataa cgtctccacg atttcgcgtt cgatgatgaa taaagccgtt
     3481 gaaaaaggcg tggcggcgga aaacgtcatt ttcttcccca actggtcgga aatcgcccgt
     3541 tttcagcatg tcgcagacgc cgatgttgct gcacttcgta accaacttgg cctgccggat
     3601 aacaaaaaaa tcattcttta ctccggcaat attggtgaaa agcaggggct ggaaaacgtt
     3661 attgaagctg ccgatcgcct gcgcgatgaa ccgctgattt ttgccattgt cgggcagggc
     3721 ggcggcaaag cgcggctgga aaaaatggcg cagcagcgcg gactgcgcaa tatgcaattt
     3781 ttcccgctgc aatcgtatga cgctttaccc gcactgctga agatgggcga ttgccatctg
     3841 gtggtgcaaa aacgcggtgc ggcagatgcc gtattgccgt cgaaactgac caatattctg
     3901 gcggtaggcg gtaacgcggt gattaccgca gaagcccaca cagaactggg gcagctttgc
     3961 gaaaccttct caggaattgc ggtttgcgta gaaccagaat cggtcgaggc gctggtggcg
     4021 gggatccgtc aggcgctcct gctgcccaaa cacaacacgg tggcacgtga atatgctgaa
     4081 cgcacgctcg ataaagagaa cgtgttacgt caatttatac atgatattcg gggataatta
     4141 tgtcgcagtc gaaactctat ccagttgtga tggcaggtgg ctccggtagc cgcttatggc
     4201 cgctttcccg cgtactttat cccaagcagt ttttatgcct gaaaggcgat cttaccatgc
     4261 tgcaaaccac catctgccgc ctgaacggcg tggagtgcga aagcccggtg gtgatttgca
     4321 atgagcagca ccgctttatt gtcgcggaac agctgcgtca actgaacaaa ctcaccgaga
     4381 acattattct cgaaccggca gggcgtaaca ctgcacctgc cattgcgttg gcggcgctgg
     4441 cggcaaaacg tcatagtccg gacagcgatc cgttaatgtt ggtcctggcg gcagatcatg
     4501 tgattgccga cgaagacgcg ttccgcgccg ccgtgcgtaa tgccatgccg tatgccgaag
     4561 cgggcaagct ggtcaccttc ggcattgtgc cggatctacc agaaaccggt tatggctata
     4621 ttcgtcgcgg tgaagtgtct gcgggcgagc aggatacggt ggcctttgaa gtggcgcagt
     4681 ttgtcgaaaa accgaatctg gaaaccgccc aggcctatgt ggcaagcggt gaatattact
     4741 ggaacagcgg catgttcctg ttccgcgccg gacgctatct cgaagaactg aaaaaatatc
     4801 gcccggatat tctcgacgcc tgcgaaaaag cgatgagcgc cgtcgatccg gatctcgatt
     4861 ttattcgtgt ggatgaagag gcgtttcttg cctgcccgga agagtcggtg gattacgcgg
     4921 tcatggaacg tacggcagat gccgttgtgg tgccgatgga tgcgggctgg agcgatgtcg
     4981 gttcctggtc ctctttatgg gagatcagcg cccacaccgc ggaaggcaac gtttgccacg
     5041 gcgatgtgat taatcacaaa accgaaaaca gctacgtgta tgccgaatct ggcctggtca
     5101 ccaccgtcgg ggtgaaagat ctggtagtgg tgcagaccaa agacgcggtg ctgattgcag
     5161 atcgtaacgc ggtgcaggat gtgaaaaaag tggtcgagca gatcaaagcc gatggtcgcc
     5221 atgagcatcg ggtgcatcgc gaagtgtatc gcccgtgggg caaatatgac tctatcgacg
     5281 cgggcgaccg ctaccaggtg aaacgcatca ccgtgaaacc gggcgagggc ttgtcggtac
     5341 agatgcacca tcaccgcgcg gaacactggg tagtggtcgc gggaacggca aaagtcacca
     5401 ttgacggtga tatcaaactg cttggtgaaa acgagtccat ttatattccg ctgggggcga
     5461 agcactgcct ggaaaacccg gggaaaattc cgctcgattt aattgaagtg cgctccggct
     5521 cttatctcga agaggatgat gtggtgcgct tcgcggatcg ctacggacgg gtgtagtagt
     5581 tgaataatca accggaataa atctccggta aataacgaca aaaacaaaat tggccgtttc
     5641 ggtcagggcc aactattgcc tgaaaaaggg taacgatatg aaaaaattaa cctgctttaa
     5701 agcctatgat attcgcggaa aattaggcga agaactgaat gaagatatca cctggcgtat
     5761 tgggcgtgcc tatggcgaat ttctcaaacc gaaaaccatt gttttaggcg gtgatgtccg
     5821 tctcaccagc gaaaccttaa aactggcgct ggcgaaaggt ttacaggatg cgggcgtcga
     5881 tgtgctggat attggcatgt ccggcaccga agagatctat ttcgccacgt tccatctcgg
     5941 tgtggatggc ggcatcgaag ttaccgccag ccataatccg atggattaca acggcatgaa
     6001 actggtgcgc gaaggggctc gcccgatcag cggtgatacc ggactgcgcg acgtccagcg
     6061 tctggcagaa gccaacgatt ttcctcccgt cgatgaaacc aaacgcggtc gctatcggca
     6121 aatcaacctg cgcgacgctt acgttgatca tctgttctgt tatatcaacg tcaaaaacct
     6181 tacgccgctc aagctggtga tcaactccgg gaacggcgcg gtgggtccgg tggtggatgc
     6241 catcgaagcc cgctttaaag ccctcggcgc acccgtggaa ttgatcaaag tgcacaacac
     6301 gccggacggc aatttcccca acggtattcc taacccgctg ctaccggaat gtcgcgatga
     6361 cacccgtaat gcggtcatca aacacggcgc ggatatgggc attgcttttg atggcgattt
     6421 tgaccgctgt ttcctgtttg acgaaaaagg gcagtttatc gagggctact acattgtcgg
     6481 tttactggca gaagcgttcc tcgaaaaaaa tcccggcgcg aagatcatcc acgatccacg
     6541 tctctcctgg aacaccgttg atgtggtgac tgccgcaggt ggcacgccag taatgtcgaa
     6601 aaccggacac gcctttatta aagaacgtat gcgcaaggaa gacgccatct acggtggcga
     6661 aatgagcgcc caccattact tccgttattt cgcttactgc gacagcggca tgatcccgtg
     6721 gctgctggtc gccgaactgg tgtgcattaa agggaaaacg ctgggcgaac tggtgcgcga
     6781 ccgcatggcg gcattcccgg caagcggtga gatcaacagc aaactggcgc aacccgttga
     6841 ggcgattaat cgcgtcgaac agcattttag ccgcgaggcg ctggcggtgg atcgcaccga
     6901 tggtatcagc atgacctttg ccgactggcg ctttaacctg cgctcctcca acaccgaacc
     6961 ggtggtacgc ctgaatgtgg aatcgcgcgg tgatgtgccg ctgatggaag cgcgaacgcg
     7021 aactctgctg acgttgctga acgagtaatg tcggatcttc ccttacccca ttgcgggtaa
     7081 ggggctaata acaggaacaa cgatgacaaa tctaaaaaag cgcgagcgag cgaaaaccaa
     7141 tgcatcgtta atctctatgg tgcaacgctt ttcagatatc accatcatgt ttgccgggct
     7201 atggctggtt tgcgaagtca gcggactgtc attcctctac atgcacctgt tggtggcgct
     7261 gattacgctg gtggtgttcc agatgttgga cggcatcacc gatttttatc gctcatggcg
     7321 aggtgttcgg gcaacgacag aatttgccct gctgctgcaa aactggacct taagcgtgat
     7381 ttttagcgcc ggactggtgg cgttcaacaa tgatttcgac acgcaactga aaatctggct
     7441 ggcgtggtat gggctgacca gcatcgggtt ggtggcgtgt cgttcgtgta ttcgcattgg
     7501 tgcgggctgg ttgcgtaatc atggctataa caagcgtatg gttgccgtgg cgggggattt
     7561 agctgccggg caaatgctga tggagagctt ccgtaatcag ccgtggttag ggtttgaagt
     7621 ggtgggcgtt taccatgacc caaaaccggg cggcgtttct aacgactggg cgggcaatct
     7681 gcaacagctg gtcgaggatg caaaagcggg caagattcac aacgtctata tcgcgatgca
     7741 aatgtgcgac ggcgcacgag tgaaaaaact ggtccatcaa ctggcggaca ccacctgttc
     7801 ggtgctgctg atccccgacg tctttacctt caacattctc cattcacgcc tcgaagagat
     7861 gaacggcgtt ccggtggtgc cgctgtacga cacgccactt tccggggtta accgcctgat
     7921 aaaacgtgcg gaagacattg tgctggcaac gctgatcttg ctgctgatct ccccggtgct
     7981 gtgctgtatt gcgctggcgg tgaaactcag ttcaccaggg ccggttattt tccgccagac
     8041 tcgctacggc atggatggca agccgatcaa agtgtggaag ttccgttcca tgaaagtgat
     8101 ggagaacgac aaagtggtga ctcaggcgac gcagaacgat ccgcgcgtca ccaaagtggg
     8161 gaactttctg cgccgcacct cgctggatga attgccgcag tttatcaatg tgctgaccgg
     8221 ggggatgtcg attgtgggcc cacgtccgca cgcggtggcg cataacgaac aatatcgcca
     8281 gctcattgaa ggctacatgc tgcgccacaa agtgaaaccg ggcattaccg gttgggcgca
     8341 gattaacggc cggcgcggcg aaaccgacac gctggagaaa atggaaaaac gcgtcgagtt
     8401 cgaccttgag tacatccgtg aatggagcgt ctggttcgat atcaaaatcg ttttcctgac
     8461 ggtattcaaa ggcttcgtta acaaagcggc atattgatat gagcttacgt gaaaaaacca
     8521 ttagcggcgc gaagtggtcg gcgattgcta cggtgatcat catcggcctc gggctagtgc
     8581 agatgaccgt gctggcgcgg attatcgaca accaccagtt cggtttgctt accgtgtcgc
     8641 tggtgattat cgcgctggca gatacactct ctgacttcgg catcgctaac tcgattattc
     8701 agcgaaaaga aatcagccat cttgaactca ccacgctgta ctggctgaac gtcgggttgg
     8761 ggcttgtggt gtgcgtggcg gtgtttttgt tgagtgatgc cattggtgac gtgctgaata
     8821 acccggatct ggcgccgttg attaaaacat tgtcgctggc gtttgtggtg atcccccacg
     8881 ggcaacagtt ccgcgcgttg atgcaaaagg agctggagtt caacaaaatc ggcatgatcg
     8941 aaactagcgc ggtgctggcg ggctttactt ttacagtggt tagcgcccat ttctggccgt
     9001 tggcgatgac cgcgatcctc ggttatctgg tcaatagtgc ggtgagaacg ctgctgtttg
     9061 gctactttgg ccgcaaaatt tatcgccctg gtctgcattt ctcgctggct tcggtggcac
     9121 cgaacttacg ctttggtgca tggctgacgg cggacagcat catcaactat ctcaacacca
     9181 acctttcgac gctggtgctg gcgcgtattc tcggcgcggg cgtggcaggg ggatacaacc
     9241 tggcgtacaa cgtggccgtt gtgccgccga tgaaattgaa cccgatcatc acccgcgtgt
     9301 tgtttccggc gtttgccaaa attcaggacg acaccgaaaa gctgcgcgtt aacttctaca
     9361 agctgctgtc ggtggtgggg attatcaatt ttccggcgct gctggggctg atggtggtgt
     9421 cgaataactt tgtaccgctg gtctttggcg aaaagtggaa cagcattatt ccggtgctgc
     9481 aattgctgtg tattgtgggg ctactgcgct cagtgggtaa cccgattggc tcgctgctga
     9541 tggcgaaagc gcgggtggat atcagcttta aattcaacgt attcaaaacc tttctgttta
     9601 ttcctgcgat tgttattggc ggacagatgg cgggtgcaat cggcgtcacg cttggtttcc
     9661 tgctggtgca gattatcaac accattctga gttacttcgt gatgattaaa ccggtgctcg
     9721 gttccagtta tcgccagtac atcctgagtt tgtggctgcc gttttatctc tcgctgccga
     9781 cgctggtggt tagttatgcg ctgggcattg tgctgaaagg ccaactggcg ctggggatgc
     9841 tgctggcggt gcaaatagcc acaggcgtgc tggcgtttgt ggtgatgatt gtgttgtcgc
     9901 gccatccgct ggtggtggaa gtgaagcgtc agttttgtcg cagcgaaaaa atgaaaatgc
     9961 ttttgcgggc cgggtgaatg gttgttttcg gttccgacaa tagttgccgg atgcggcgtg
    10021 aacgccttat ccggcctacg gctctgtgct cggggcttgt aggtctgata agacgcgtca
    10081 gcgtcgcatc aggcactgaa tgccggatgc ggcgtgaacg ccttatccgt cctacggttc
    10141 tgtgctcgga ccttgtaggc ctgataagac gcgccaggca aaaagcggca acgaacacaa
    10201 caaacacagc ctcacctggc atcaaattta tgaggaaaaa atgaaattat tgattctggg
    10261 caaccacact tgcggcaatc gcggcgacag cgccatcttg cgcggcttcc ttgatgccat
    10321 caacatcctc aatccacacg ccgaagtgga cgtaatgagc cgctatccgg tcagttcttc
    10381 ctggctgctc aaccgtccgg taatgggcga tccgctgttc ctgcaaatga aacaacacaa
    10441 cagcgcggcg ggtgttgtcg ggcgcgtaaa aaaagtcctc cgtcgccgct accagcacca
    10501 ggtattgctc tcacgcgtca ccgatactgg caagctgcgt aatatcgcca ttgcccaggg
    10561 atttactgac tttgttcgcc tgctttcagg ttacgatgcc attatccagg tcggcggttc
    10621 gttttttgtt gatctctacg gcgtgccgca gtttgaacac gcgctttgca cgtttatggc
    10681 gaaaaagccg ctgtttatga ttggtcacag cgtcggcccg ttccaggatg agcaatttaa
    10741 ccaactggca aactacgtat tcgggcactg cgacgcgctg atcctgcgcg aatcggtcag
    10801 cctggatcta atgaaacgca gcaatatcac taccgcaaaa gttgaacatg gcgtcgatac
    10861 cgcgtggctg gtcgatcacc acaccgaaga tttcaccgcc agctatgccg tccaacactg
    10921 gctggacgtt gccgcacaac agaaaacggt ggccattacc ctgcgcgaac tggcaccgtt
    10981 cgacaaacgt ctcggcacca ctcaacaagc gtatgaaaaa gcctttgccg gggtggtcaa
    11041 tcgcattctc gatgaagggt atcaggtgat tgcgctctcc acctgtacgg gtatcgacag
    11101 ctataacaaa gacgaccgca tggtggcgct caacctgcgt cagcacatca gcgatcctgc
    11161 ccgttatcac gtggtgatgg atgaactcaa cgatctggaa atgggcaaaa tcctcggtgc
    11221 ctgtgaactc accgtcggta cgcgcctgca ctctgccatt atctcgatga atttctccac
    11281 tccggcaatt gccatcaact acgaacacaa atccgccggg attatgcagc agcttgggct
    11341 acctgagatg gcgattgata tccgtcattt attagacggc agcctgcaag cgatggttgc
    11401 ggatacctta ggccagcttc cggagctgaa tacacgactt aacgaagccg tcagtcgcga
    11461 acgccaggca ggaatgcaga tggtgcaatc tgtgcttgag cgtatcgggg aggcgaaatg
    11521 aaggtcggct tctttttact taaatttccg ctgtcgtcgg aaaccttcgt tctcaaccaa
    11581 atcactgcgt ttattgatat gggctttgag gtggagattg tcgcgctgca aaaaggcgat
    11641 acgcaaaaca cccacgcggc atggacgaaa tataaccttg ccgccagaac ccgctggtta
    11701 caggacgaac ctacgggcaa agtggcgaaa ctgcgccacc gcgccagcca gaccttacgc
    11761 ggcattcatc gtaaaaatac ctggcaggcg ctcaacctca aacgctatgg tgccgagtcg
    11821 cggaacctga ttttgtctgc catttgcggc caggtcgcaa caccatttca tgccgatgta
    11881 tttatcgctc attttggccc ggcgggggta accgcagcaa aactacgcga actgggtgtc
    11941 attcgcggca aaattgctac tatcttccac ggcattgata tctccagtcg ggaagtgctc
    12001 aaccattaca ctcccgaata tcaacaactg tttcgccgtg gcgatttgat gctaccgata
    12061 agcgatctgt gggccggaag gctgcaaaaa atgggctgcc ccagagaaaa aatcgccgta
    12121 tcgcgtatgg gcgtggacat gacgcgcttt agcccgcgtc cggtaaaacc gcccgcaacg
    12181 ccgctggaaa tcatttccgt cgcacgctta accgagaaaa aaggcctgca tgtggcgatt
    12241 gaagcctgcc gtcagttgaa agagcagggc gtggcatttc gctatcgcat cctcggcatt
    12301 ggcccgtggg aacgacgcct gcgcaccctc atcgaacaat atcaactgga agatgttgta
    12361 gagatgccgg gctttaaacc aagccacgaa gtgaaggcga tgctcgacga cgcggatgtc
    12421 ttcctgttgc catcggttac aggtgcggat ggcgatatgg aaggtattcc ggtggcgcta
    12481 atggaagcga tggcggtcgg tattccggtg gtttctactc tgcatagcgg aattccggaa
    12541 ctggtggagg ccgacaaatc cggctggctg gtgcctgaga acgatgctcg tgcactggcg
    12601 caacgactgg tggcgtttag ccaactggac accgacgaac tggctccggt cgtcaaacgt
    12661 gcgcgcgaaa aagtcgaaca cgattttaac cagcaggtga tcaatcgaga actcgccagc
    12721 ttgctgcagg ctttatagag gagaacgcat gccatttaaa aaactctccc gacgcacctt
    12781 cctgacggca agctcggcgc ttgccttcct ccatacccct ttcgctcgcg cacttcctgc
    12841 ccgacaaagc gtcaatatca acgactacaa tccacacgac tggatcgcct catttaaaca
    12901 agccttcagc gaagggcaaa cggtcgtcgt gcctggcgga ttggtttgcg acaatatcaa
    12961 cactggcatc ttcatccccc ctggcaaaac gttacacatc ctgggaagcc tgcgcggcaa
    13021 cggcagaggg cgatttgtct tacaggacgg cagccaggtg acaggggagg agggcggcag
    13081 tatgaataac atcaccctgg atgtgcgtgg ttctgactgc accatcaaag ggctggcgat
    13141 gagcggcttt ggtccggtaa cgcagattta tatcggcggc aaaaacaaac gggtcatgcg
    13201 caacctgacc atcgataacc tgaccgttag ccacgctaat tacgccatct tacgccaggg
    13261 atttcataac cagataatcg gtgccaacat caccaactgt aagttcagcg acttacaggg
    13321 cgacgccatt gaatggaacg tggcaattaa cgacagtgat attttgatct ccgaccatgt
    13381 catcgagcgc atcaactgta ctaacggcaa aatcaactgg ggcattggca taggccttgc
    13441 gggaagcact tacgataata attacccgga agatcaggca gtgaaaaacg ttgtcgtggc
    13501 gaatatcacg ggatcggatt gtcggcagtt gatacatgtt gaaaatggta aacattttgt
    13561 tattcgtaat atcaaagccc gcaatatcac gccggatttc agtaagaaag caggcattga
    13621 taacgccaca gtcgctattt acggttgtga caatttcgtg attgataata ttgaaatgat
    13681 taatagcgcc gggatgttaa ttggctatgg ggtaattaaa ggcaaatatc tctcgatacc
    13741 gcaaaatttc cgagtgaata atattcaact ggataacact caccttgctt ataaattgcg
    13801 cggcatccaa atctccgccg ggaatgctgt ctcctttgtg gcactgacta acattgagat
    13861 gaagcgtgcc tcgcttgagc tacacaataa accgcaacac ctttttatgc gtaatatcaa
    13921 ggtgatgcag aaatcctctg ttggaccagc attgagcatg aactttgaca tgcgcaaaga
    13981 cgttcgcggc gtctttatgg cgaaaaaaga aacactgcta tctcttgcaa atgttcatgc
    14041 ggtgaatgaa agagggcaaa gctccgtcga tatcgacagg ataaatcacc atattgttaa
    14101 tgtggaaaag attaacttta gattgccgga acggagggag tagatttgcg accattcctg
    14161 gaaaaatgga gccatactta ggaacaatgc tactgcaatc cacaacgaag cggcgtaaca
    14221 tcacaagtaa ttcagtaatc aattcagggt aattgatgct ggcgaaaaaa atcgaacaag
    14281 ctataattca gcaaccattt tacaggtgga tgaaataatg acgaatttaa aagcagttat
    14341 tcctgtagcg ggtctaggga tgcatatgtt gcctgctact aaggcgattc ccaaagagat
    14401 gctaccgatc gtcgacaagc caatgattca gtacattgtt gacgagattg tggctgcagg
    14461 gatcaaagaa atcctcctgg taactcacgc gtccaaaaac gcggtcgaaa accacttcga
    14521 cacctcttat gaattagaat ctctccttga actgcgcgtg aagcgtcagc tgctggcgga
    14581 agtacagtcc atctgtccgc cgggcgtgac cattatgaac gtgcgtcagg gcgaaccttt
    14641 aggtttaggc cactccattt tgtgtgcacg acccgccatt ggtgacaacc catttgttgt
    14701 ggtattgccg gacgttgtga tcgacgacgc cagtgccgac ccgctgcgct acaaccttgc
    14761 tgccatgatt gcgcgcttca atgaaacggg ccgcagccag gtgctggcaa aacgtatgcc
    14821 gggtgacctc tctgaatact ccgtcattca gaccaaagaa ccactggatc gtgaaggtaa
    14881 agtcagccgc atcgtcgaat ttatcgaaaa accggatcag ccgcagacgc tggactcaga
    14941 catcatggcc gttggtcgct atgtgctttc tgccgatatt tggccggaac tggaacgtac
    15001 tcagcctggt gcatggggac gtattcagct gactgatgct attgccgagc tggcgaaaaa
    15061 acagtccgtt gatgccatgc tgatgactgg ggacagttac gactgcggta aaaaaatggg
    15121 ttatatgcag gcatttgtga agtatggact acgcaacctc aaagaagggg cgaagttccg
    15181 taaagggatt gagaagctgt taagcgaata atgaaaatct gaccggatgt aacggttgat
    15241 aagaaaatta taacggcagt gaagattcgt ggcgaaagta atttgttgcg aatattcctg
    15301 ccgttgtttt atataaacaa tcagaataac aacgagttag caataggatt ttagtcaaag
    15361 ttttccagga ttttccttgt ttccagagcg gattggtaag acaattagcg tttgaatttt
    15421 tcgggtttag cgcgagtggg taacgctcgt cacatcgtag acatgcatgt agtgctctgg
    15481 tagctgtaaa gccaggggcg gtagcgtgca ttaacacctc tattaatcaa cctaagagcc
    15541 gcttatttca ccgcatgctc tgaagttata tggaataaat aagtgaagat acttgttact
    15601 ggtggcgcag gatttattgg ttctgctgta gttcgtcaca ttataaataa tacgcaggat
    15661 agtgttgtta atgtcgataa attaacgtac gccggaaacc tggaatcact tgctgatgtt
    15721 tctgattctg aacgctatgt ttttgaacat gcggatattt gcgatgctgc tgcaatggcg
    15781 cgaatttttt ctcagcatca gccggatgca gtgatgcacc tggctgctga aagccatgtt
    15841 gaccgttcaa ttacaggccc tgcggcattt attgaaacca atattgttgg tacttatgtc
    15901 cttttggaag ctgctcgcaa ttactggtct gctcttgata gcgacaagaa aaatagcttc
    15961 cgttttcatc atatttctac tgacgaagtc tatggtgatt tgcctcatcc tgacgaagta
    16021 aataataaag aaaaattacc cttatttatt gagacaacag cttacgcacc aagcagccct
    16081 tattccgcat ccaaagcatc cagcgatcat ttagtccgcg cgtggaaacg tacctatggt
    16141 ttaccgacca ttgtgactaa ttgctctaac aattatggcc cttatcattt cccggaaaaa
    16201 ttgattccat tggttattct gaatgctctg gaaggtaaga tgttgcctat ttatggcaaa
    16261 ggggatcaaa ttcgtgattg gctgtatgta gaggatcatg ctcgagcgtt atatacagtt
    16321 gttactgaag gtaaagcagg tgaaacctat aatattggtg gacacaacga aaagaaaaac
    16381 atcgatgtag tgctcactat ttgtgatttg ttggatgaga ttgtcccgaa agagaaatct
    16441 taccgcgagc aaattactta tgttgccgat cgtccgggac acgatcgccg ttatgcgatt
    16501 aatgctgaga agattggtcg cgaattgggc tggaaaccac aggaaacgtt tgagagcggg
    16561 attcgtaaaa cagtggaatg gtaccttgct aatgcaaaat gggtcgaaaa tatgaaaagt
    16621 ggtgcctatc aatcgtggat tgaacagaac tatgagggcc gccagtaatg aatattctcc
    16681 ttttcggcaa aacagggcag gtaggttggg aactacagcg tgctctggca cctctgggta
    16741 atttgattgc tcttgatgtt cactccactg attattgtgg tgattttagt aatcctgaag
    16801 gtgtagctga aaccgtaaga agcattcggc ctgatattat tgtcaacgca gccgctcaca
    16861 ccgcagtaga caaagcagaa tcagaaccgg agtttgcaca attacttaac gcgacaagtg
    16921 tcgaagcgat tgcgaaagca gccaatgaag tcggcgcctg ggttattcac tactctactg
    16981 actacgtatt tccggggacc ggtgaaatac catggcagga gacggatgca accgcaccgc
    17041 taaatgtgta cggtgaaacc aagttagctg gagaaaaagc attacaagag cattgtgcga
    17101 agcaccttat tttccgtacc agctgggtat atgcaggtaa aggaaacaat tttgccaaga
    17161 caatgttacg tctggcaaaa gagcgcgaag aattagctgt cattaacgat cagtttggtg
    17221 caccaacagg tgctgagttg ctggctgatt gtacggcaca tgccattcgt gttgcactga
    17281 ataaaccaga agtcgcaggc ttataccatc tggtagccag tggtaccaca acctggtacg
    17341 attatgctgc gctggttttt gaagaggcgc gcgaagcagg cattcccctt gcactcaaca
    17401 agctcaacgc agtaccaaca acagcctatc ctacactagc tcgtcgtccg cataactctc
    17461 gccttgatac agaaaaattt cagcagaact ttgcgcttgt cttgcctgac tggcagattg
    17521 gcgtgaaacg catgctcaac gaattattta cgactacagc tatttaatag tttttgcatc
    17581 ttgtttgtga tggtggagca agatgaatta aaaggaatga tgaaatgaaa acgcgtaaag
    17641 gtattatttt agcgggtggt tctggtactc gtctttatcc tgtgactatg gcagtcagta
    17701 aacagctgct accgatttat gataaaccga tgatctatta tccgctctct acactgatgt
    17761 tggcgggtat tcgcgatatt ttgattatca gtacgccaca ggatactcct cgttttcaac
    17821 aactgttggg tgacggtagc cagtgggggc tgaatcttca gtacaaagtg caagcgagtc
    17881 cggatggtct tgcgcaggcg tttattatcg gtgaagagtt tattggtggt gatgattgtg
    17941 ctttgattct tggtgataat atcttttacg gtcacgatct gccgaagtta atggatgccg
    18001 ctgttaacaa agaaagtggt gcaacggtat ttgcatatca cgtaaatgat cctgaacgct
    18061 atggtgtcgt ggagtttgat aataacggaa cagccattag ccttgaagaa aaaccgttag
    18121 agccaaaaag caattatgct gtaaccggac tttatttcta tgacaatgat gttgtagaaa
    18181 tggcgaaaaa ccttaagcct tctgcccgtg gcgaactgga aattaccgat attaaccgta
    18241 tttatatgga gcagggacgt ttatctgttg ccatgatggg acgtggatat gcatggttgg
    18301 acacggggac acatcaaagt cttattgagg caagcaattt tatcgcaaca atagaagaac
    18361 gtcaggggct gaaagtttcc tgcccggaag aaattgctta ccgtaaaggg tttatcgatg
    18421 ctgagcaggt gaaagtatta gctgaaccgt tgaagaaaaa tgcttatggt cagtatctgc
    18481 tgaaaatgat taaaggttat taataaaatg aacgtaatta aaactgaaat tcctgatgtg
    18541 ttaattttcg agccgaaagt ttttggtgat gagcgtggtt tctttatgga aagctttaat
    18601 cagaaagttt tcgaagaggc tgtagggcgt aaggttgaat ttgttcagga taatcattcg
    18661 aagtctagta aaggcgtttt acgtgggctg cactatcagt tagaacctta tgcgcaagga
    18721 aaactggtac gctgcgttgt tggtgaagtt tttgacgtag cggttgatat tcgtaaatcg
    18781 tcaccaactt ttggcaaatg ggttggggtg aatttatctg ctgagaataa gcgccagttg
    18841 tggatccctg aaggatttgc acatggtttt ttggtgctga gtgaaacggc ggagtttttg
    18901 tataagacga ctaattatta tcatccgata agtgaaagag gggttaaatg ggatgatccc
    18961 tgtattgata ttaagtggcc tctagtatcg tctcccctgt tatcagaaaa agataagtgt
    19021 tattcatggc taacgaaaca aaatgaacag taataagaga caaactttat tcttttcgct
    19081 tgatcaaata atagattctg gacttgtttt tatttttatt gctattggcg gtaatttact
    19141 tgacaaatca gatatggcta atgttgtgtt attccaatct gttgcattag tatctgtatt
    19201 gttttgttcc tgttttacaa cgcaatattt actgttgcgc tataaaaaac aatcttcact
    19261 tttttggcta aagttatttt tatttttttg tattattact atgttgattg tatcattatg
    19321 gtttcaatcg gcagaaatat tattcttgtt ttttgttgga atatcttcag aatacataaa
    19381 acgatactgc ttttatatta ataattcttg tctctctttc ttttcaacga taataacggc
    19441 atttattttt tttgttttta tattgatgtg ttggctgaat ttcatgcgca ttaattcgac
    19501 tatatatata tatatatagc ggtgcaaagt taattccgct aacgataata tgttgttttc
    19561 tttttattaa aacaaagttc aatagtgatg gtgaatatga aatgccatct ttatggtatg
    19621 caattactga ttcattaaga tttggaggcg tgttttctgt tattaccatt atttattgga
    19681 ttacaaatca aggtttcttt atattctttc atgacagaat gcctgcagca gagttggtag
    19741 aaattagagt tacgcagaat gtgtttggtg tagttacaat gctaattgca ttgtacgact
    19801 ctatgttttt aaagaaaaac atagagaata aaaataaaat atttgattgg cgatcttatt
    19861 ttaaattcct tgtaatttca attgttttga ttacatttaa ttttatttta ttatatatat
    19921 tatcaataac aatatataaa catttggatg tttttaaata ttcgatatgt cttgcactgg
    19981 cccaattttt ttatctttcc gcaaggatgc ctgtacttat tttgaaattg cgctatagtt
    20041 taagtattat tctgtggtta tacgtgtgtt cgcttttttt gtcctcgtgt tacttattct
    20101 tgaaacataa tgattatgat tttcaatata tagtgcaatc tataacatta tctaacttct
    20161 ttatttttct attttcatta ttaatagtgt tttacaaaga gaggatttat gggaagaatt
    20221 attgaagctc tgtatgggat atcaacggaa ctgaaagagc gaatcttgaa tatgggagag
    20281 aaaacagttc cggtgaatta ctatacaaga cataataact ggggtgatca attaaataaa
    20341 tatttaattg aaaaaattac caataaaaag gtagtaaaga acaacttcaa aaagctacct
    20401 catatattag ctataggaag cgttctttca agtgcatcaa ataaaagtat cgtatggggg
    20461 agtggtttta tatctaaaga tgcgccatta cgagaaacag cccctgatat tagggctgtt
    20521 cgaggtgttt tgactagaaa taaacttcag aaagattttt caattgactg ccctgatgtg
    20581 ttgggagacc cggccgttct tttgccttta ttttataaag caaaacatag aagtaaaaaa
    20641 tacaaagtcg gtattattcc acactataaa gataagcaac gagctgttgt acaggatttt
    20701 ttacataaag gatgtgttct tgttgatatt caagatgaca ttgaagtttt tattgataaa
    20761 attaacgaat gtgaggttgt aatttcatcg tcacttcatg gattaattgc tgcagatact
    20821 tatggtatac ctaatttatg ggtttcattt ggtgaccaag tattaggtgg tgattttaag
    20881 tttttggact attatagtac tactaataat ataaatccta aaatgatacg actagataat
    20941 gatcataaat attctattga tgatttggtt agaatttcta gatgtaataa atttattaga
    21001 agttctgaag agttacttga agcgtttcct agggagtaca tatgaattac tattatataa
    21061 ttgtgtaggt gaaaaatgct agttacaatc ctggctttat ttctgtttat acaattactc
    21121 tatttaatat cgtataaacg taatttcaat acaaaaagta taaatgacat tttgtcattt
    21181 ataatttttc tatttttaat tgtattgttt ttctttagga atgaagattt tggtgcagat
    21241 actcagaact atttaaatga atttgatgaa tattgttcta atcctagtgg atatatagga
    21301 gtggattaca catataaata tatatttgat ttaattaatt ttctaatgtt ggatagttgc
    21361 catattagtt ggttaatttg gatatggcca atatttgtta ttggttgcat ctttttagca
    21421 ataacaatat ttagagttga taaaatttat atcattgctt tgttttcttc atttataggc
    21481 attgagttgt taactaatgc tctgaggcag ggattctcaa tagcagtact gttattatcg
    21541 ttctgtttgt ttataaagag gcgatatttt ttattcttga tagctgtaac catttctttt
    21601 ctttttcatc aagcttcgat tctgatcgtt tctattttta ttatttctag atgtagcatt
    21661 agaattgtag ttcctagtat tgttgtaggt gtgtttttgt tgtttgcgac aaatattcta
    21721 gatgttgtgc cttgggttat tgagtttaaa aagttaatat ataaatattt gccgtatgca
    21781 gatgaggact ttattattcg aatcataagt ataattaata ctttatgtct ttgtgtatta
    21841 tatttaattg tcatgattaa atcacattgt aaggataaaa taataaacaa tattgttatt
    21901 aatgctacct ttgtttgttg tatcgcatct attgttccgt atcttggttt tcgaattata
    21961 tatggcgtat atccattatt attactttta acctactgta gcataagaaa ttatatcggc
    22021 agagtgtctt catataatta tttatcgctt tcgatatgta ttaatatctt tatctcaatt
    22081 atgtggttgt gtggttcctc ccatatgaac aaaataccat ttgtgagcat tattatatga
    22141 aaaaaaggag tttcggtatt tctgttgttg tacctgtgta taacaggaaa gaaaagttaa
    22201 tcagggctat tgactcagtt gatactttat ccccacatct tgtggagatt attgtaattg
    22261 atgattgttc agatttggct cctgacacat ttttagagaa gagtaataag tatggggtta
    22321 atgttcacat ttatcgcaat aaatataata aggggccgca aatttgtagg aacattggga
    22381 ttaggagagc taaatttaat tatattgcct ttttagattc agatgattat ttttgcatgg
    22441 gaaaaataga ttggctattg aatattctga aggatgagga tatagatttt ctctaccatg
    22501 cagtaaatgg atgtgaaaaa tataatcgaa tttcatcata ttggtttaat acagtaggta
    22561 agtttattca ttttagatgg tttttgattt ttttgaatcc ttgtgttaca ccaagtgtag
    22621 tgattaaaag gaaagtttgt ttatttaatc catgtttgag atattcagag gattatgcat
    22681 attttttatc ttatattaat tcaaaaacta aagttaaata ttttgaaagc atatatacaa
    22741 cagttcctcg agaaataggc acaagaggtg gtatttcgca taatattata aaaatgagaa
    22801 agggagaatt ttatggaaaa aaaaatatat taaggaagag gcgaaatata tcgaattata
    22861 ttcggtttct gatatcttta ggcatggctt gtcttagagt tttctttgat atagtgagaa
    22921 aacggtataa agtgaataat ttatttaaag atatatagtt aaatttctaa tattagcaag
    22981 ataaattaag gtcatcagta tgacagaaca attttcagag aaaaaaatag atgttgttgg
    23041 aattgttgga ttgccagcat gttatggtgg atttgaatca ttagttcaaa atttagttga
    23101 ttatcaaagt caaaatataa aatacaatgt atattgttca cgaaaaaaat ataaaaacac
    23161 cccaaaaaaa tacaagcgtg ctgacttgaa gtatatacca tttgacgcca atggtagttc
    23221 tagtatcttg tatgatatct attcgttatt tttgtcattg tttaacaagg tagatgttgt
    23281 cctaattctc ggggtttcag ggtgtgtttt tctaccaatt tacagatttt tttcgtcatc
    23341 aaaggttatt gtaaatattg atggattaga atggaaaaga gcaaaatgga agggtattgc
    23401 taagtggtat ttaaaaaatt cagagaaaat agctgttaaa tattcagatg ttgttgtggc
    23461 tgataatgaa gctattgcta aatatgtctt aaaaaaatac ggtttagaag ctaaaattat
    23521 tgcttatggt ggtgatcatt cattggttaa gaagccaata tcagttataa aagaggacta
    23581 tttttttact gtctgcagga ttgaaccaga aaataacata agaatgatat tagaagcatt
    23641 taaaaataca acacacagtc taaaaattgt tggtaattgg gattccagtt tgtatgggcg
    23701 acgactaaaa gaagaatttg ggaattataa taatattgaa attatagacc ctatatatga
    23761 ttctgatatc ctttttaact ttaggtcttt atgccgtggc tatattcatg ggcattcagc
    23821 tggtgggaca aatccttctt tagtcgaggc tatgcatttt caaattccta ttattgcctt
    23881 tgattgtgat ttcaatcggt ttacaactga caactatgcg ttttatttta aaaataaaaa
    23941 tgagctatct tttatcgtca atgatatatt aaatggcaat cagaatgaac aggcagaaat
    24001 ctgcgcaaaa aaaatgaagg aaattgctac aaaaaaatac acgtgggata ccatagccaa
    24061 aatgtatgaa gaactttatt gatatttaat aaatgaacga ttatttaaag attggcatat
    24121 aatttagttc agaagcaagc cataaccccc tgacaggagt aaacaatgtc aaagcaacag
    24181 atcggcgtcg tcggtatggc agtgatgggg cgcaaccttg cgctcaacat cgaaagccgt
    24241 ggttataccg tctctatttt caaccgttcc cgtgaaaaaa cggaagaagt gattgccgaa
    24301 aatccaggca aaaaactggt tccttactat acggtgaaag agtttgttga atctctggaa
    24361 acgcctcgtc gcatcctgtt aatggtgaaa gcaggtgcag gcacggatgc tgctattgat
    24421 tccctcaagc catacctcga taaaggtgac atcatcattg atggtggtaa caccttcttc
    24481 caggacacca ttcgtcgtaa ccgtgagctt tctgccgaag gttttaactt tatcggtacc
    24541 ggtgtttccg gaggcgaaga aggcgcgttg aaaggtcctt ccattatgcc tggtgggcag
    24601 aaagaagcct atgaactggt tgcgccgatc ctgaccaaaa tcgccgccgt tgctgaagac
    24661 ggcgagccat gcgttaccta tattggtacc gatggtgcag gtcactatgt gaagatggtt
    24721 cacaacggta ttgaatacgg cgatatgcaa ctgattgctg aagcctattc tctcctgaaa
    24781 ggcggcctga atctctctaa cgaagaactg gcacagacct ttaccgagtg gaataacggt
    24841 gaactgagta gctacctgat cgacatcacc aaagacatct tcaccaaaaa agatgaagac
    24901 ggtaactacc tggttgatgt gatcctggat gaagcagcaa acaaaggtac gggcaaatgg
    24961 accagccaga gcgcgctgga tctcggcgaa ccgctgtcgc tgattaccga gtctgtgttt
    25021 gcacgttata tctcgtctct gaaagatcag cgtgttgccg cgtctaaagt tctctctggt
    25081 ccgcaagcgc agccagcagg cgacaaggct gagtttatcg agaaagttcg tcgtgcgctg
    25141 tatctgggca aaatcgtttc ttatgctcag ggcttctctc aactgcgtgc tgcgtctgaa
    25201 gagtacaact gggatctgaa ctacggcgag atcgcgaaga ttttccgtgc tggttgcatc
    25261 atccgtgcgc agttcctgca gaaaatcacc gatgcttatg ccgaaaatcc gcaaatcgct
    25321 aacctgctgc tggctccgta cttcaagcaa attgcagatg actaccagca ggctctgcgt
    25381 gatgtcgttg cttatgcagt acagaacggt atcccggttc cgaccttcgc cgctgcggtt
    25441 gcctattacg atagctaccg tgccgctgtt ctgcctgcga acctgatcca ggcacagcgt
    25501 gactatttcg gtgcacatac ctataagcgc attgataaag aaggtgtgtt ccatactgaa
    25561 tggctggatt aatctgattt aaccaacaat aaaattgaag cccggcgtat attgcatcgg
    25621 gctttttttt gccaattatc ttatagacta a
//
LOCUS       DADMHC010000039        25638 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.039, whole genome shotgun sequence.
ACCESSION   DADMHC010000039 DADMHC010000000
VERSION     DADMHC010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 25638)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25638)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25638
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.039"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(76..696)
                     /gene="entD"
                     /locus_tag="JNZ57_001352"
     CDS             complement(76..696)
                     /gene="entD"
                     /locus_tag="JNZ57_001352"
                     /EC_number="6.3.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415115.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin synthase subunit EntD"
                     /protein_id="HAY8827627.1"
                     /translation="MKTTHTSLPFAGHTLHFVEFDPANFCEQDLLWLPHYAQLQHAGR
                     KRKAEHLAGRIAAIYALREYGYKCVPAIGELRQPVWPAEVYGSISHCGATALAVVSRQ
                     PIGVDIEEIFSAQTATELTDNIITPAEHERLADCGLAFSLALTLAFSAKESAFKASEI
                     QTDAGFLDYQIISWNKQQVIIHRENEMFAVHWQIKEKIAITLCQHD"
     gene            complement(866..3106)
                     /gene="fepA"
                     /locus_tag="JNZ57_001353"
     CDS             complement(866..3106)
                     /gene="fepA"
                     /locus_tag="JNZ57_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore enterobactin receptor FepA"
                     /protein_id="HAY8827628.1"
                     /translation="MNKKIHSLALLVNLGIYGVAQAQEPTDTPVSHDDTIVVTAAEQN
                     LQAPGVSTITADEIRKNPVARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGIGPE
                     NTLILIDGKPVSSRNSVRQGWRGERDTRGDTSWVPPEMIERIEVLRGPAAARYGNGAA
                     GGVVNIITKKGSGEWHGSWDAYFNAPEHKEEGATKRTNFSLTGPLGDEFSFRLYGNLD
                     KTQADAWDINQGHQSARAGTYATTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYS
                     RQGNLYAGDTQNTNSDAYTRSKYGDETNRLYRQNYSLTWNGGWDNGVTTSNWVQYEHT
                     RNSRIPEGLAGGTEGKFNEKATQDFVDIDLDDVMLHSEVNLPIDFLVNQTLTLGTEWN
                     QQRMKDLSSNTQALTGANTGGAIDGVSATDRSPYSKAEIFSLFAENNMELTDSTIVTP
                     GLRFDHHSIVGNNWSPALNISQGLGDDFTLKMGIARAYKAPSLYQTNPNYILYSKGQG
                     CYASAGGCYLQGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRNKIEAGYVAVG
                     QNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETVMWTNNITYMLKSENKTTGDRLSII
                     PEYTLNSTLSWQAREDLSMQTTFTWYGKQQPKKYNYKGQPAVGPETKEISPYSIVGLS
                     ATWDVTKNVSLTGGVDNLFDKRLWRAGNAQTTGDLAGANYIAGAGAYTYNEPGRTWYM
                     SVNTHF"
     gene            3349..4551
                     /gene="fes"
                     /locus_tag="JNZ57_001354"
     CDS             3349..4551
                     /gene="fes"
                     /locus_tag="JNZ57_001354"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterochelin esterase"
                     /protein_id="HAY8827629.1"
                     /translation="MTALKVGSESWWQSKHGPEWQRLNDEMFEVTFWWRDPQGSEEYS
                     PIKRVWVYITGVTDHHQNSQPQSMQRIAGTDVWQWTTQLNANWRGSYCFIPTERDDIF
                     SAPSPDRLELREGWRKLLPQAIADPLNPQSWKGGRGHAVSALEMPQAPLQPGWDCPQA
                     PEIPAKEIIWKSERLKNSRRVWIFTTGDATAEERPLAVLLDGEFWAQSMPVWPVLTSL
                     THRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKAIAPFSDRADRTV
                     VAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEG
                     LRIVLEAGIREPMIMRANQALYAQLHPIKESIFWRQVDGGHDALCWRGGLMQGLIDLW
                     QPLFHDRS"
     gene            4554..4772
                     /locus_tag="JNZ57_001355"
     CDS             4554..4772
                     /locus_tag="JNZ57_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MbtH family protein"
                     /protein_id="HAY8827630.1"
                     /translation="MAFSNPFDDPQGAFYILRNAQGQFSLWPQQCALPAGWDIVCQPQ
                     SQESCQQWLEAHWRTLTPANFTQLQEAQ"
     gene            4769..8650
                     /gene="entF"
                     /locus_tag="JNZ57_001356"
     CDS             4769..8650
                     /gene="entF"
                     /locus_tag="JNZ57_001356"
                     /EC_number="6.3.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin non-ribosomal peptide synthetase
                     EntF"
                     /protein_id="HAY8827631.1"
                     /translation="MSQHLPLVAAQPGIWMAEKLSDLPSAWSVAHYVELTGEVDAPLL
                     ARAVVDGLAQADTLRMRFTEDNGEVWQWVDDALTFELPEIIDLRTNIDPHGTAQALMQ
                     ADLQQDLRVDSGKPLVFHQLIQVADNRWYWYQRYHHLLVDGFSFPAITRQIANIYCTW
                     LRGEPTPASPFTPFADVVEEYQQYRESEAWQRDAAFWAEQRRQLPPPASLSPAPLPGR
                     SASADILRLKMEFTDGEFRQLATQLSGVQRTDLALALTALWLGRLCNRMDYAAGFIFM
                     RRLGSAALTATGPVLNVLPLGIHIAAQETLPELATRLAAQLKKMRRHQRYDAEQIVRD
                     SGRAAGDEPLFGPVLNIKVFDYQLDIPGVQAQTHTLATGPVNDLELALFPDEHGDLSI
                     EILANKQRYDEPTLIQHAERLKMLIAQFAADPALLCGDVDIMLPGEYAQLAQINATQV
                     EIPETTLSALVAEQAAKTPDAPALADARYQFSYREMREQVVALANLLRERGVKPGDSV
                     AVALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTDDQLPRF
                     ADVPDLTNLCYNAPLKPQGSAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRL
                     LWMQNHYLLTGEDVVAQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFF
                     AEYGVTTTHFVPSMLAAFVASLTPQTARQSCATLKQVFCSGEALPADLCREWQQLTSV
                     PLHNLYGPTEAAVDVSWYPAFGEELAQVRGSSVPIGYPVWNTDLRILDAMMHPVPPGV
                     AGDLYLTGIQLAQGYLGRPDLTASRFIADPFVPSERMYRTGDVARWLDNGAVEYLGRS
                     DDQLKIRGQRIELGEIDRVMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSG
                     LPLDTSALQAQLRETLPPHMVPVVLLQLPLLPLSANGKLDRKALPLPELKAQAPGRAP
                     KAGSETIIAAAFASLLGCEVQDADADFFALGGHSLLAMKLAAQLSRQVARQVTPGQVM
                     VASTVAKLATIIDAEEDSTRRMGFETILPLREGNGPTLFCFHPASGFAWQFSVLSRYI
                     DPQWSIIGIQSPRPNGPMHTAANLDEVCEAHLATLLEQQPHGPYYLLGYSLGGTLAQG
                     IAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGS
                     TSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAEL
                     DIYRQDCAHVDIISPGAFVKIGPIIRATLNR"
     gene            8866..9999
                     /gene="fepE"
                     /locus_tag="JNZ57_001357"
     CDS             8866..9999
                     /gene="fepE"
                     /locus_tag="JNZ57_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS O-antigen length regulator"
                     /protein_id="HAY8827632.1"
                     /translation="MSSLNIKQGSDAHFSEYPLASPSSNEIDLLNLIEVLWRAKKTVM
                     AVVFAFACAGLLISFILPQKWTSSAVITPAEAIQWQDLEKTFTKLRVLDLDVNIDRGG
                     AFNLFIKKFQSVSLLEEYLRSSPYVMDQLKEAKIDELDLHRAIVALSEKMKAVDDNAS
                     KKKDEPSLYTSWTLSFTAPTSKEAQTVLSGYIDYISALVVKESIENIRNKLEIKTQFE
                     KEKLAQDRIKTKNQLDANIQRLNYSLDIANAAGIKKPVYSNGQAVKDDPDFSISLGAD
                     GIERKLEIEKAVTDVAELNGELRNRQYLVEQLTKANVNDVNFTPFKYQLSPSLPVKKD
                     GPGKAIIVILSALIGGMVACGSVLLRYAMASRKQDAMMADHLV"
     gene            complement(9996..10811)
                     /gene="fepC"
                     /locus_tag="JNZ57_001358"
     CDS             complement(9996..10811)
                     /gene="fepC"
                     /locus_tag="JNZ57_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-enterobactin ABC transporter ATP-binding
                     protein"
                     /protein_id="HAY8827633.1"
                     /translation="MTESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGC
                     GKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELV
                     ARGRYPHQPLFTHWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQ
                     ETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALR
                     EGKIVAQGAPKEIVTAELIERIYGLRCMIIDDPVAGTPLVVPLERTAPSTANS"
     gene            complement(10808..11800)
                     /gene="fepG"
                     /locus_tag="JNZ57_001359"
     CDS             complement(10808..11800)
                     /gene="fepG"
                     /locus_tag="JNZ57_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-enterobactin ABC transporter permease"
                     /protein_id="HAY8827634.1"
                     /translation="MIYVSRRLLITCLLLISACVVAGIWGLRSGAVTLETSQVFAALM
                     GDAPRSMTMVVTEWRLPRVLMALLIGAALGVSGAIFQSLMRNPLGSPDVMGFNTGAWS
                     GVLVAMVLFGQDLTAIALAAMVGGIVTSLLVWLLAWRNGIDTFRLIIIGIGVRAMLVA
                     FNTWLLLKASLETALTAGLWNAGSLNGLTWAKTSPSAPIIILMLIAAALLVRRMRLLE
                     MGDDTACALGVSVERSRLLMMLVAVVLTAAATALAGPISFIALVAPHIARRISGTARW
                     GLTQAALCGALLLLAADLCAQQLFMPYQLPVGVVTVSLGGIYLIVLLIQESRKK"
     gene            complement(11797..12801)
                     /gene="fepD"
                     /locus_tag="JNZ57_001360"
     CDS             complement(11797..12801)
                     /gene="fepD"
                     /locus_tag="JNZ57_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-siderophore ABC transporter permease"
                     /protein_id="HAY8827635.1"
                     /translation="MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAF
                     SGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVNAGAS
                     FAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAA
                     VLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALN
                     SLSLGSDTATALGSRVARTQLIGLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGA
                     DHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAPVLIFLVRRKTRGGA
                     "
     gene            12912..14162
                     /gene="entS"
                     /locus_tag="JNZ57_001361"
     CDS             12912..14162
                     /gene="entS"
                     /locus_tag="JNZ57_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin transporter EntS"
                     /protein_id="HAY8827636.1"
                     /translation="MNKQSWLLNLSLLKTHPAFRAVFLARFISIVSLGLLGVAVPVQI
                     QMMTHSTWQVGLSVTLTGGAMFVGLMVGGVLADRYERKKVILLARGTCGIGFIGLCLN
                     ALLPEPSLLAIYLLGLWDGFFASLGVTALLAATPALVGRENLMQAGALTMLTVRLGSV
                     ISPMIGGLLLATGGVAWNYGLAAAGTFITLLPLLSLPALPPPPQPREHPLKSLLAGFR
                     FLLASPLVGGIALLGGLLTMASAVRVLYPALADNWQMSAAEIGFLYAAIPLGAAIGAL
                     TSGKLAHSARPGLLMLLSTLGSFLAIGLFGLMPMWILGVVCLALFGWLSAVSSLLQYT
                     MLQTQTPEAMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGV
                     LLLLVLVELRRFRQTPPQVTASDS"
     gene            complement(14166..15122)
                     /gene="fepB"
                     /locus_tag="JNZ57_001362"
     CDS             complement(14166..15122)
                     /gene="fepB"
                     /locus_tag="JNZ57_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe2+-enterobactin ABC transporter
                     substrate-binding protein"
                     /protein_id="HAY8827637.1"
                     /translation="MRLAPLYRNALLLTGLLLSGIAAVQAADWPRQITDSRGTHTLES
                     QPQRIVSTSVTLTGSLLAIDAPVIASGATTPNNRVADDQGFLRQWSKVAKERKLQRLY
                     IGEPSAEAVAAQMPDLILISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLG
                     EITGHEKQAAERIAQFDKQLAAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQM
                     LEQLGFTLAKLPTGLNASQSQGKRHDIIQLGGENLAAGLNGESLFLFAGDQKDADAIY
                     ANPLLAHLPAVQNKQVYALGTETFRLDYYSAMQVLERLKALF"
     gene            15497..16672
                     /gene="entC"
                     /locus_tag="JNZ57_001363"
     CDS             15497..16672
                     /gene="entC"
                     /locus_tag="JNZ57_001363"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase EntC"
                     /protein_id="HAY8827638.1"
                     /translation="MDTSLAEEVQQTMATLAPNRFFFMSPYRSFTTSGCFARFDEPAV
                     NGDSPDSPFQQKLAALFADAKVQGIKNPVMVGAIPFDPRQPSSLYIPESWQSFSRQEK
                     QASARRFTRSQSLNVVERQAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDA
                     AIDSGVLLERLIAQNPVSYNFHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARR
                     QPDEVLDREAGNRLLASEKDRHEHELVTQAMKEVLRERSSELHVPSSPQLITTPTLWH
                     LATPFEGKANSQENALTLACLLHPTPALSGFPHQAATQVIAELEPFDRELFGGIVGWC
                     DSEGNGEWVVTIRCAKLRENQVRLFAGAGIVPASSPLGEWRETGVKLSTMLNVFGLH"
     gene            16682..18292
                     /gene="entE"
                     /locus_tag="JNZ57_001364"
     CDS             16682..18292
                     /gene="entE"
                     /locus_tag="JNZ57_001364"
                     /EC_number="2.7.7.58"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2,3-dihydroxybenzoyl)adenylate synthase"
                     /protein_id="HAY8827639.1"
                     /translation="MSIPFTRWPEEFARRYREKGYWQDLPLTDILTRHAASDSIAVID
                     GELQLSYRELNQAADNLACTLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVL
                     ALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLHNDSGE
                     HNLQDAINHPADGFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEIC
                     QFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVT
                     ALVPPAVSLWLQALAEGESRAQLASLKLLQVGGARLSATLAARIPAEIGCQLQQVFGM
                     AEGLVNYTRLDDSAEKIIHTQGYPMCPDDEVWVADAEGNPLPQGEVGRLMTRGPYTFR
                     GYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEEIENL
                     LLRHPAVIYAALVSMEDELMGEKSCAYLVVKEPLRAVQVRRFLREQGIAEFKLPDRVE
                     CVDSLPLTAVGKVDKKQLSQWLASRASA"
     gene            18306..19163
                     /gene="entB"
                     /locus_tag="JNZ57_001365"
     CDS             18306..19163
                     /gene="entB"
                     /locus_tag="JNZ57_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin biosynthesis bifunctional
                     isochorismatase/aryl carrier protein EntB"
                     /protein_id="HAY8827640.1"
                     /translation="MAIPKLQAYALPESHDIPQNKVDWAFELQRAALLIHDMQDYFVS
                     FWGENCPMMEQVIANIAALRDYCKQHNIPVYYTVQPKEQSDEDRALLNDMWGPGLTRS
                     PEQQKVVDRLTPDADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTT
                     ATDAFMRDIKPFMVADALADFSRDEHLMSLKYVAGRSGRVVMTEELLPAPVPASKAAL
                     REVILPLLDESDEPFDDDNLIDYGLDSVRMMALAARWRKVHGDIDFVMLAKKPTIDAW
                     WKLLSREVK"
     gene            19163..19909
                     /gene="dhbA"
                     /locus_tag="JNZ57_001366"
     CDS             19163..19909
                     /gene="dhbA"
                     /locus_tag="JNZ57_001366"
                     /EC_number="1.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706451.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase"
                     /protein_id="HAY8827641.1"
                     /translation="MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQY
                     PFATEVMDVADAGQVAQVCQRLLAETERLDVLINAAGILRMGATDQLSKEDWQQTFAV
                     NVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGL
                     ELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEI
                     ANTILFLASDLASHITLQDIVVDGGSTLGA"
     gene            19912..20325
                     /gene="entH"
                     /locus_tag="JNZ57_001367"
     CDS             19912..20325
                     /gene="entH"
                     /locus_tag="JNZ57_001367"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proofreading thioesterase EntH"
                     /protein_id="HAY8827642.1"
                     /translation="MIWKRHLTLDELNATSDNTMVAHLGIVYTRLGDDVLEAEMPVDT
                     RTHQPFGLLHGGASAALAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGKVRGVC
                     QPLHLGRQNQSWEIVVFDEQGRRCCTCRLGTAVLG"
     gene            20506..22611
                     /gene="cstA"
                     /locus_tag="JNZ57_001368"
     CDS             20506..22611
                     /gene="cstA"
                     /locus_tag="JNZ57_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein CstA"
                     /protein_id="HAY8827643.1"
                     /translation="MNKSGKYLVWTVLSVMGAFALGYIALNRGEQINALWIVVASVCI
                     YLIAYRFYGLYIAKNVLAVDPKRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGMIWLLAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAG
                     VIALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLALFMGIYLRYLRLGRI
                     GEVSVIGLVFLIFAIISGGRVAESPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLL
                     APRDYLSTFLKIGTIVGLAVGILIMRPTLTMPALTKFVDGTGPVWTGNLFPFLFITIA
                     CGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVSACIIDPGVYFA
                     MNSPMAVLAPAGTADVVASVAQVVSSWGFSITPDTLNQIASEVGEQSIISRAGGAPTL
                     AVGMAYILHGALGGMMDVAFWYHFAILFEALFILTAVDAGTRAARFMLQDLLGVVSPG
                     LKRTDSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAGMALMLC
                     AVVLFKMKRQRYAWAALVPTAWLLICTLTAGWQKAFSPDAKVGFLAIANKFQAMIDSG
                     NIPSQYTESQLAQLVFNNRLDAGLTIFFMVVVVVLALFSIKTALAALKDPKPTAKETP
                     YEPMPENVEEIVAQAKGAH"
     gene            22793..22990
                     /locus_tag="JNZ57_001369"
     CDS             22793..22990
                     /locus_tag="JNZ57_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HAY8827644.1"
                     /translation="MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTY
                     EEFFRERQDARYGGKGGARCC"
     gene            complement(23000..24088)
                     /gene="hcxA"
                     /locus_tag="JNZ57_001370"
     CDS             complement(23000..24088)
                     /gene="hcxA"
                     /locus_tag="JNZ57_001370"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxycarboxylate dehydrogenase HcxA"
                     /protein_id="HAY8827645.1"
                     /translation="MPHNPIRVVVGPANYFSHPRSFNHLNDFFTDEQLSRAVWIYGKR
                     AIAVAQTKLPPAFGLPGAKHILFRGHCSESDVQQLAAESGDDRSVVIGVGGGALLDTA
                     KALARRLGLPFVAVPTIAATCAAWTPLSVWYNDAGQALHYEIFDDANFMVLVEPEIIL
                     NAPQQYLLAGIGDTLAKWYEAVVLAPQPETLPLTVRLGINNAQAIHDVLLNSSEQALA
                     DQQNQQLTQSFCDVVDAIIAGGGMVGGLGDRFTRVAAAHAVHNGLTVLPQTEKFLHGT
                     KVAYGILVQSALLGQDDVLAQLTGAYQRFHLPTTLAELEVDINNQAEIDKVIAHTLRP
                     VESIHYLPVTLTPDTLRAAFEKVESFKA"
     gene            24197..25346
                     /gene="ybdL"
                     /locus_tag="JNZ57_001371"
                     /pseudo
     CDS             24197..25346
                     /gene="ybdL"
                     /locus_tag="JNZ57_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308666.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methionine-oxo-acid transaminase"
     gene            complement(25347..>25638)
                     /locus_tag="JNZ57_001372"
     CDS             complement(25347..>25638)
                     /locus_tag="JNZ57_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HAY8827646.1"
                     /translation="SSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGRHQITAMS
                     EIVRELSQLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQYSRAWTVK"
BASE COUNT         5619 a         6731 c         7253 g         6035 t
ORIGIN      
        1 gtggtaaggc acctgcttta cactttcgcc cgcggtcagt gatggctgcg ggcgaatcgt
       61 accagatgtt gtcaattaat cgtgttggca cagagttatg gctatttttt cttttatctg
      121 ccagtgcaca gcaaacatct cattctcacg atgaatgatg acctgctgtt tattccagct
      181 aattatctga tagtccagaa aacctgcatc agtttggatc tcacttgcct taaatgcgct
      241 ctctttggcg gaaaatgcca gtgtcagcgc cagagaaaag gctaaaccgc agtctgcgag
      301 tcgctcgtgt tctgctggtg taataatgtt gtctgtcaat tcggtcgctg tttgcgcaga
      361 aaaaatttct tcgatatcaa cgccaatcgg ttgacgggaa accacggcca atgccgtagc
      421 cccgcagtgg ctaatactgc cgtatacctc cgcaggccac accggttggc gtagctcgcc
      481 gattgcgggc acacatttat agccatattc ccgcagcgca taaattgcag cgatccgccc
      541 ggctaaatgt tcggctttgc gcttccgtcc agcgtgttgc agttgcgcgt aatgcggcag
      601 ccagagtaaa tcctgctcac aaaaattcgc cggatcgaac tcaacaaaat gcagcgtatg
      661 tccggcaaag gggagggagg tatgcgtagt tttcatgtcg accatattag agactgatga
      721 caaacgctaa actgcctgat gcgctacgct tatcaggcct acatggtcct gcaatatatt
      781 gaattggcaa gatttttgta ggccggataa gcgtagcgca tccggcatga acgacgcgca
      841 ctttgtcaac aatctgacgt tagcatcaga agtgagtgtt tacgctcatg taccacgtac
      901 gtcccggctc gttataggta tacgccccgg cacccgcgat atagttggcc cctgccagat
      961 cgcccgtggt ctgggcatta cccgcacgcc acaaacgttt gtcgaacagg ttgtccacgc
     1021 cgccggtcag actgacattc ttcgtcacat cccaggtcgc gctcagaccc acaatgctgt
     1081 aaggactgat ttctttggtt tccgggccaa ccgctggctg acctttgtag ttgtattttt
     1141 tcggctgctg cttaccgtac caggtgaagg tcgtttgcat cgacaaatct tcccgcgcct
     1201 gccagctcag cgttgagttc aacgtgtact ccgggatgat cgacaaacgg tcgcccgtgg
     1261 ttttgttttc actcttcagc atataagtga tgttattggt ccacatcacc gtttcgctaa
     1321 ctggtacgtt taacgatcct tccagacctt caaccactgc tttcggcacg ttatcccact
     1381 gatagagatc ggtgccgact gcgttttgcc ctacagccac atagcccgct tcaatcttat
     1441 tgcgataatc gttacggaac caggtgacgc ccgccagcca gccgtcgcgt ttgaactcca
     1501 gaccaatctc tttgttgatg ctggtttctg ctttcaggtc atcgttacct tgcagatagc
     1561 agccgcccgc gctggcatag cagccctgac ctttactgta gagaatgtag ttcgggttag
     1621 tctggtacag gctcggcgct ttataggcgc gggcaatgcc cattttcagc gtgaagtcat
     1681 cgcctaaacc ttgcgatatg ttcagcgccg ggctccagtt attgccgaca atactgtgat
     1741 gatcgaaacg cagccccggc gttacgatgg tgctgtcagt cagctccatg ttgttttcgg
     1801 caaatagcga gaaaatttct gcttttgaat acgggctacg gtcggtggca ctcacaccat
     1861 caatagcgcc gccggtgttc gccccggtca gcgcctgggt attggaactc aagtccttca
     1921 tccgttgctg attccactcc gtacccagcg tcagcgtttg gttaacgagg aaatcaatcg
     1981 gcaggttaac ttcgctgtgc agcatcacgt catcaagatc gatatcgacg aaatcctgtg
     2041 tcgctttttc gttaaatttc ccttcggtac cgcccgccag accttccgga atacgcgagt
     2101 tacgggtgtg ttcatactgc acccagttgc tggtggtcac tccgttatcc cagccaccgt
     2161 tccaggtcag cgagtagttc tggcgataca ggcggttggt ttcatcgcca tatttcgagc
     2221 gagtgtaagc gtcagagttg gtgttctggg tatcgcccgc atacaggtta ccctggcggc
     2281 tgtaacccgc ttccagttcg agtgattgca gaggcgcgaa gtcccagcgc accacgccat
     2341 taatatcttt gttgatcacc ccttcgcgcc cggctggtaa cgtcgtggca tacgttccgg
     2401 cacgcgcgga ctgatggccc tggttgatat cccacgcgtc agcctgggtt ttgtcgaggt
     2461 tgccatacaa gcggaagctg aattcgtcgc ccagcgggcc ggtcagactg aagttggtgc
     2521 gtttagtggc accttcctct ttatgttctg gcgcattgaa ataagcgtcc caggaaccgt
     2581 gccactcacc gctgcctttt ttggtaatga tgttaactac gccacccgcc gcgccgttgc
     2641 cataacgcgc tgcagccgga ccacgcagaa cttcaatacg ttcaatcatt tcaggcggca
     2701 cccaggaagt atcaccacgg gtatcgcgct cgccacgcca gccctgacgc accgagttac
     2761 ggctgctgac cggtttgccg tcaattaaaa tcagcgtgtt ttccggacct ataccgcgaa
     2821 tatcaatctg tcggttattc ccacgctgac cactggtgga gttaccggtc aggttaacgc
     2881 ctggcatggt acggatgatc tccgacacat cgcgggcaac cgggtttttg cggatttcat
     2941 ctgcggtgat ggtcgaaacg ccaggtgcct gcaagttctg ctcggcggcg gtaacgacaa
     3001 tggtatcgtc atgtgaaaca ggagtatcgg tcggctcttg tgcctgcgct accccataaa
     3061 tccccagatt gaccaacaag gccagggaat gaatcttctt gttcattgtt ttattcctgc
     3121 atttttgcca cgaattgcaa ctgtcgggca tggtcgtcct caacacgacg catcccgcta
     3181 ccgcgaaaac ctttgatcct gaaagacacg cagtgcagtt ggttaattaa tgtccgcgct
     3241 tcccacggcg cgccattacg ctattgcaaa tgcaaatagt tatcaataat attatcaata
     3301 tatttctgca atcaatgaaa aattgcacag taaacatggg gttatggtgt gacggcgtta
     3361 aaagtaggaa gtgagagctg gtggcagtcg aaacatggcc cggaatggca gcgtctgaat
     3421 gacgaaatgt ttgaggtcac tttctggtgg cgtgatcccc aaggttctga agaatactcg
     3481 ccgataaagc gcgtatgggt ctacatcact ggtgtgaccg atcatcatca gaacagccag
     3541 ccccagtcga tgcagcgcat tgcaggtact gatgtctggc agtggacgac acaactcaat
     3601 gccaactggc gcggcagcta ctgctttatt cccaccgaac gcgatgacat tttttctgca
     3661 ccatcccccg atcgcctcga attacgtgaa ggctggcgaa aactattacc ccaggcaata
     3721 gccgatccgc tgaatccaca aagctggaaa ggcgggcgag ggcacgctgt ttctgcactc
     3781 gaaatgccgc aagcgcctct gcaaccggga tgggattgtc cgcaagcgcc agaaatacca
     3841 gccaaagaaa ttatctggaa aagtgaacgg ttgaaaaatt cacgtcgtgt atggattttt
     3901 accaccggcg atgcaacagc agaagaacgc ccgctggcag ttttgctcga tggcgaattt
     3961 tgggcgcaaa gtatgcccgt ctggccagtg ctgacttcgc tgacccatcg tcagcaactt
     4021 cctcccgccg tgtatgtgtt gatcgacgct atcgacacca cgcaccgcgc tcacgaactg
     4081 ccgtgtaatg cggatttctg gctcgcagta cagcaagagt tattacccct ggtgaaagct
     4141 attgcccctt ttagcgatcg cgccgatcgc accgtggttg ccgggcagag ttttggtgga
     4201 ctttccgcgc tgtatgccgg actgcactgg cctgaacgtt ttggttgtgt attaagccag
     4261 tcaggatcgt actggtggcc gcatcggggc gggcagcaag agggcgtgtt acttgaaaag
     4321 cttaaagctg gtgaagttag cgccgaaggt ctgcgcattg tgctggaagc gggtattcgc
     4381 gagccgatga ttatgcgggc caatcaggcg ctgtatgcgc aattacaccc cataaaagaa
     4441 tccattttct ggcgtcaggt tgacggcgga catgatgcgc tttgttggcg cggtggcttg
     4501 atgcaggggc taatcgacct ctggcaacca cttttccatg acaggagttg aatatggcat
     4561 tcagtaatcc cttcgatgat ccacagggag cgttttacat tttgcgcaat gcgcaggggc
     4621 aattcagtct gtggccgcaa caatgcgcct taccggcagg ctgggacatt gtgtgtcagc
     4681 cgcagtcaca agagtcctgc cagcagtggc ttgaagccca ctggcgtact ctgacaccgg
     4741 cgaatttcac ccagttgcag gaggcgcaat gagccagcat ttacctttgg tcgccgcaca
     4801 gcccggcatc tggatggcag aaaaactgtc ggatttaccc tccgcctgga gcgtagcgca
     4861 ttacgttgag ttaaccggag aggttgatgc gccattactg gcccgcgcgg tggttgacgg
     4921 actagcgcaa gcagatacgc tgcggatgcg ttttacggaa gataacggcg aagtctggca
     4981 gtgggtcgat gatgcgctga cgttcgaact gccagaaatt atcgacctgc gaaccaacat
     5041 tgatccgcac ggtactgcgc aggcattaat gcaggcggat ttgcaacaag atctgcgcgt
     5101 cgatagcggt aaaccactgg tctttcatca gctgatacag gtggcggata accgctggta
     5161 ctggtatcag cgttatcacc atttgctggt cgatggcttc agtttcccgg ccattacccg
     5221 ccagatcgcc aatatttact gcacatggct gcgtggcgaa ccaacgcctg cttcgccgtt
     5281 tacgcctttc gctgatgtag tggaagagta ccagcaatac cgcgaaagcg aagcctggca
     5341 gcgtgatgcg gcattctggg cagaacagcg tcgtcaactg ccgccgcccg cgtcactttc
     5401 tccggcacct ttaccggggc gcagcgcttc ggcagatatt ttacgtctga aaatggaatt
     5461 taccgacggg gaattccgcc agttggctac gcaactttca ggtgtgcagc gtaccgattt
     5521 agcccttgcg ctgacggctt tgtggctggg gcgattgtgc aatcgcatgg actacgccgc
     5581 tggatttatc tttatgcgtc gactgggctc ggcggcgctg acggctaccg gacccgtgct
     5641 caacgttttg ccgttgggta ttcacattgc ggcgcaagaa acgctgccgg aactggcaac
     5701 ccgactggca gcacaactga aaaaaatgcg tcgtcatcaa cgttacgatg ccgaacaaat
     5761 tgtccgtgac agcgggcgag cggcaggtga tgaaccgctg tttggtccgg tactcaatat
     5821 caaggtattt gattaccaac tggatattcc tggtgttcag gcgcaaaccc ataccttggc
     5881 aaccggtccg gttaatgacc ttgaactggc cctgttcccg gatgaacacg gtgatttgag
     5941 tattgagatc ctcgccaata aacagcgtta cgatgagcca acgttaatcc agcatgctga
     6001 acgcctgaaa atgctgattg cccagttcgc cgcggatccg gcgctgttgt gcggcgatgt
     6061 cgatattatg ctgccaggtg agtatgcgca gctggcgcag atcaacgcca ctcaggttga
     6121 gattccagaa accacgctga gcgcgctggt ggcagaacaa gcggcaaaaa caccggatgc
     6181 tccggcgctg gcagatgcgc gttaccagtt cagctatcgg gaaatgcgcg agcaggtggt
     6241 ggcgctggcg aatctgctgc gtgagcgtgg cgttaaaccg ggcgacagcg tggcggtggc
     6301 gctaccgcgc tcggtctttt tgaccctggc gctacatgcg atagttgaag ctggcgcggc
     6361 ctggctaccg ctggataccg gctatccgga cgatcgcctg aaaatgatgc tggaagatgc
     6421 gcgtccgtcg ctgttaatca ccaccgacga tcaactgccg cgctttgccg atgttccaga
     6481 tttaaccaac ctttgctata acgccccgct taaaccgcag ggcagtgcgc cgctgcaact
     6541 ttcacaaccg catcacacgg cttatatcat ctttacctct ggctccaccg gcaggccgaa
     6601 aggggtaatg gtcgggcaga cggctatcgt taaccgcctg ttgtggatgc aaaatcatta
     6661 tctgcttaca ggcgaagatg tcgttgccca aaaaacgccg tgcagttttg atgtctcggt
     6721 gtgggagttt ttctggccgt ttattgccgg ggctaaactg gtgatggctg aaccggaagc
     6781 gcaccgcgac ccgctcgcta tgcagcaatt ctttgccgaa tatggcgtaa cgaccacgca
     6841 ctttgtgccg tcgatgctgg cagcatttgt tgcatcgctg acgccgcaaa ccgctcgcca
     6901 gagttgcgcg acgttgaaac aggttttctg tagtggtgag gccttaccgg ctgatttatg
     6961 ccgcgaatgg caacagttaa ccagcgtgcc gttgcataat ctatatggcc cgacggaagc
     7021 ggcggtagat gtcagctggt atccggcttt tggcgaggaa ctggcacagg tgcgcggcag
     7081 cagtgtgccg attggttatc cggtatggaa tacggatctg cgtattcttg atgcgatgat
     7141 gcatccggtg ccgccgggtg tggcgggtga tctctatctc accggcattc aactggcgca
     7201 ggggtatctt ggacgacccg atctgaccgc cagccgcttt attgccgatc cttttgtccc
     7261 tagtgaacgg atgtaccgta ccggagacgt tgcccgctgg ctggataacg gcgcggtgga
     7321 gtacctcggg cgcagtgacg atcagctaaa aattcgcggg cagcgtattg aactgggcga
     7381 aatcgatcgc gtgatgcagg cgctgccgga tgtcgaacaa gccgttaccc acgcctgtgt
     7441 gattaaccag gcggcagcca ccggtggtga tgcgcgtcag ttggtgggct atctggtgtc
     7501 gcaatcaggt ctgccgttgg ataccagcgc attacaggcg cagcttcgcg aaacattgcc
     7561 accacatatg gtgcccgtgg ttctgctgca acttccactg ttacctctta gcgccaacgg
     7621 caagctggat cgcaaagcct taccgttgcc tgaactgaag gcacaagcgc cggggcgtgc
     7681 gccaaaagcg ggcagtgaaa cgattattgc cgcggcattc gcgtcgttgc tgggttgtga
     7741 ggtgcaggat gccgatgctg atttctttgc gcttggcggt cattcgctac tggcaatgaa
     7801 actggcagcg cagttaagtc ggcaggttgc ccgccaggtg acgccggggc aagtgatggt
     7861 cgcgtcaacc gtcgctaaac tggcaacgat tattgatgct gaagaagaca gcacccggcg
     7921 tatgggattc gaaaccattc tgccgttgcg tgaaggtaat ggcccgacgc tgttttgttt
     7981 ccatccggca tccggttttg cctggcagtt tagcgtgctc tcgcgttata tcgatccaca
     8041 atggtcgatt atcggcattc agtcgccgcg ccccaatggc cccatgcata ccgcggcaaa
     8101 tctggatgaa gtctgtgaag cgcatctggc aacgttactt gaacaacaac cgcacggccc
     8161 ttattacctg ctggggtatt cccttggcgg tacgctggcg cagggcattg cggcgcgact
     8221 gcgtgcccgt ggcgaacagg tggcatttct tggtttgctg gatacctggc cgccagaaac
     8281 gcaaaactgg caggaaaaag aggctaatgg tctggacccg gaagtgctgg cggagattaa
     8341 ccgcgaacgc gaggccttcc tggcggcaca gcagggaagt acttcaacgg agttgtttac
     8401 caccattgaa ggcaactacg ctgatgctgt gcgtctgctg acgactgctc atagcgtacc
     8461 gtttgatggt aaagcgacgc tgtttgttgc tgaacgcacg cttcaggaag gtatgagccc
     8521 cgaacgcgct tggtcgccct ggattgccga gctggatatc tatcgtcagg attgtgcgca
     8581 tgtggatatt atctctccag gggcgtttgt aaaaattggg ccgattattc gcgcaacgct
     8641 aaacaggtaa attaatatta tctataaacc cataattaca gaaaataatt atgggttttt
     8701 tatttgtttg atttataggt ttgatgaata tttctcttaa atagagtgag tgttgcattc
     8761 agtggaagga atttacaaac ttcagcttcg gataatttct caccaactgg taaagtgagc
     8821 gccgtggaga tttcccccta ttggactcat tttcaggtta tacccatgtc atcactgaat
     8881 attaaacagg gaagtgacgc tcatttttcc gagtatcctc tggcgtcgcc cagtagtaat
     8941 gaaattgatt tacttaatct aatcgaagtt ttatggcggg ccaaaaaaac ggtcatggcg
     9001 gtcgtttttg catttgcctg cgcaggttta ctgatctctt tcatcctgcc gcaaaaatgg
     9061 accagctcag ccgttattac tcccgccgaa gccattcagt ggcaggacct ggagaaaacc
     9121 tttaccaaac tccgcgttct tgatctcgat gttaatatcg accgtggcgg tgcatttaac
     9181 ctgtttatca agaagtttca gtccgttagc ttgctggaag agtacctgcg ttcatcacct
     9241 tatgtgatgg accaattaaa agaggcgaaa atcgatgaac tggatttgca tcgcgctatt
     9301 gttgcattga gcgaaaaaat gaaagcggtt gatgacaatg ccagtaagaa aaaagatgaa
     9361 ccgtcactgt atacctcctg gacgctaagt tttaccgcgc caaccagtaa agaggcgcag
     9421 accgttttga gcgggtatat cgattatatc tctgcgttgg tggtgaaaga gtcgatagaa
     9481 aacatccgta ataaactgga gatcaaaacc cagtttgaaa aagaaaaact ggctcaggat
     9541 cgcattaaaa cgaaaaatca acttgatgca aacattcagc gcctcaatta ttctctcgac
     9601 attgccaacg cggcaggaat taaaaagccc gtatacagta atggtcaggc cgttaaagat
     9661 gaccccgatt tctctatttc tctcggcgca gacggtattg aacgcaaact ggaaattgaa
     9721 aaagcggtta ctgacgttgc ggaactgaac ggtgaattac gtaatcggca gtatcttgtc
     9781 gagcaattaa caaaagcaaa tgtcaacgat gtgaatttta cgccgtttaa atatcagtta
     9841 agcccgtcat tgccagtgaa aaaagacggt ccgggtaagg cgattattgt gatcctttcc
     9901 gcgctgatcg gcgggatggt ggcttgtggt agcgtgttat tgcgctatgc gatggcatcc
     9961 agaaaacagg atgccatgat ggcagaccac ttagtttaac tatttgcggt tgaaggtgcc
    10021 gttcgttcga gcggcaccac aagcggcgtt ccggctaccg gatcgtcaat gatcatgcat
    10081 cgcagaccat aaatgcgctc aatcagttca gcagtgacaa tctccttcgg cgctccctga
    10141 gcaacaattt tcccttcccg caatgcaatc aaatggctgg cgtaacgaca ggcctgatta
    10201 agatcgtgca gcaccgccgc cagggtatag cctttctcgc ggttcagttc gcttaacagt
    10261 tccagtagat caatctgatg actgatatcc agccaggtcg tgggttcgtc gagcagcata
    10321 attgccgttt cctgggccag caccatcgcg atccacgctc gctggcgttg tccgccagaa
    10381 agggtatcca cgctttgatc tgccagatga gttattcccg tggcctgcat cgctttcgtt
    10441 accgcttctt catcctcttt gcgccagtgg gtaaacagcg gttgatgcgg ataacgtcca
    10501 cgcgccacca gctcctgcac ggtgatatcg cccggcgtgg tagcattttg cgccaacaga
    10561 ccaatccggc gtgcaacttc tttactggcg taatgttgaa tgtgctcgcc atccagccag
    10621 acatgcccgt gagcaggcgt catcaggcgg cttaaggtac gcagtaacgt ggatttacca
    10681 cagccatttg gtccgataat tgccgtgaag tgaccatcag gaatttctac agtcagattt
    10741 tccgcaacgg tatatttgcc atatcccagg gttaactgtt cgccgcgcaa acgggctact
    10801 gattcggtca ttttttgcga gactcctgaa ttaacaagac gataaggtaa ataccgccga
    10861 ggctgacggt aacgacgcca accggaagtt gatacggcat aaacagttgt tgggcgcaga
    10921 gatcggccgc cagcagtaac agcgctccgc acagcgccgc ctgggtcagc ccccagcgag
    10981 cggtgccgct aatgcgtcgg gcaatgtgcg gcgcgactaa agcaataaag gaaatcggcc
    11041 cggcaagcgc cgttgccgca gcggtaagca ccactgcaac cagcatcatt aacagacgcg
    11101 aacgctcgac gctgacgccc agcgcgcagg cggtatcatc gcccatctcc agcaagcgca
    11161 ttcgccgcac cagcaaggcg gcggcaatga gcatcaatat aatgatgggt gcggaaggcg
    11221 aagtttttgc ccacgtcagg ccattgagcg atccggcatt ccacaaaccc gctgttagcg
    11281 ccgtttctaa agacgctttc agcaacagcc aagtattaaa ggccaccagc atggcgcgaa
    11341 cgccgatgcc gataataatc aaccgaaagg tgtcgatacc gttacgccag gcgagcagcc
    11401 agaccaacag agaagtgaca atgccgccca ccattgctgc cagcgcgata gccgtcaggt
    11461 cctgaccaaa cagcaccatc gccaccagca cgccgctcca cgccccggtg ttaaagccca
    11521 ttacgtcagg gctgccgagc gggttacgca tcagcgactg aaaaatcgca ccgctgacgc
    11581 ccagtgccgc gccaatcaac agcgccatca gcacgcgtgg taaacgccat tcggtgacca
    11641 ccatcgtcat actgcgcggc gcatcgccca tcagcgcggc gaatacctgc gaggtttcca
    11701 gcgtgacggc accgctgcgt aatccccaga tacctgcaac cacacaggcg gaaataagca
    11761 gcaaacaggt gatgagtaat cggcgagaga cgtaaatcat gcaccacctc gcgttttacg
    11821 tcgcacgagg aagatcagca ccggtgcacc aataaaggca ctgaccacag aaacgcgcag
    11881 ttcaccgggc acaatcaccc gcccgatgat atcggcaaac agcagcaggg caggggtagc
    11941 aagcagcgtt acgggcagcg accagcgatg atcggcaccc accagccaac gcgccatatg
    12001 cggcatcatc aggccaataa aggcaatcgg gccaactacc gctgtcgcac taccacaaag
    12061 cacggtaatc gccagcagac caattaactg tgtgcgcgcc acgcgactgc ccagcgccgt
    12121 cgcggtgtcg ctgccgaggc ttaaactgtt cagcgcgcgg ctcagtaata gcgcggttgc
    12181 tccggcgatc agcaccggga tcagcaccac ttttaaggta tgtagattgc gaatatccag
    12241 cgaaccggct tgccagaaac gcagttgatc gtagacgtca ggattaagca gggcgatgcc
    12301 gctggtcagc ccttccagca ctgccgccag cgccacgccc gccagggtta aacgcaccgg
    12361 acttaactgc ccgccgccct gactgccggt aaaggcaaca atcaatgagg ccaccagcgc
    12421 cccggcgaag gccatcgcca gttgttcctg cgcggatgag taaccaaaca gcgccgcacc
    12481 cagcacaatg gcaaagctgg ctccggcgtt cacgccaagc aagccggggt cggcaagtgg
    12541 atttcgggtg agggtttgca tcaacgcccc ggcaaggcca agcgcgccgc ctgccagtaa
    12601 accggcaagg gtgcgcggca gtcgcgcgtc gagcacgatg gtgcagtcgg cgctctggca
    12661 ggtgccggag aaggcctcca gcactacgga agcggggagt gattttgctc caatgagcag
    12721 gcttaatgcc gtcgcgataa tcagtaataa cagcaatccg ggcacggcaa tggcgcgtgt
    12781 cacggcaaca gaaccagaca tatgaacttc catgataatg aaattaatta tcgttatcga
    12841 tcttatttgg atatgttagc atgtgcagcc taagaatagg tatttaaaat atttgatggc
    12901 aaggcattgt aatgaataaa caatcctggc tgcttaacct cagcctgttg aaaacgcacc
    12961 cggcgtttcg cgcagtattc ctcgctcgtt ttatctcaat tgtgtctctg ggtttgctcg
    13021 gcgtcgcggt gccggtgcag atccagatga tgacgcattc tacctggcag gtggggcttt
    13081 cggtgacgct gaccggcggc gcgatgtttg ttggcctgat ggttggcggt gtgctggcgg
    13141 atcgctatga gcgcaaaaaa gtgattttgc tggcgcgcgg cacctgtggc attggcttca
    13201 ttggactgtg ccttaatgca ctgctgccgg agccgtcatt gctggcaatc tatttacttg
    13261 gtttatggga tggttttttc gcatcgcttg gcgttacggc gctattggcg gcgacaccag
    13321 cactggtagg gcgtgaaaac ttaatgcagg ccggggcgct caccatgttg accgtgcgtc
    13381 tggggtcggt gatttcgccc atgattggcg gtttattgct ggcgaccggt ggcgtagcct
    13441 ggaactacgg gctggcggcg gcgggcacgt ttattacctt gctaccgttg ttaagccttc
    13501 cggcgttgcc accgccaccg cagccgcgcg agcatccgtt gaaatcatta ctggcaggat
    13561 ttcgttttct gctcgccagc ccgctggtgg gcgggattgc gttgctgggt ggtttattga
    13621 cgatggcgag cgcggtgcgg gtactgtatc cggcgctggc tgacaactgg cagatgtcgg
    13681 cggcagagat tggttttctc tatgcggcga tcccgctcgg tgcggctatt ggcgcattaa
    13741 ccagtgggaa actggcgcat agcgcgcgac caggattgtt gatgttgctc tccacgttgg
    13801 gatcgttcct cgccattggt ttatttggcc tgatgccgat gtggatttta ggcgtggttt
    13861 gtctggcgct gttcggctgg ctgagtgcgg tcagttcgtt gctgcaatat acaatgctgc
    13921 aaacgcaaac gccggaagca atgttagggc gaattaacgg tttgtggacg gcacaaaacg
    13981 tgacgggcga tgccataggc gcggcgctgt taggcggtct gggagcgatg atgacaccgg
    14041 ttgcttccgc aagcgcgagc ggttttggtt tgttgattat cggcgtgttg ttattgctgg
    14101 tgctggtgga gttgcgacgt tttcgccaga cgccgccgca ggtgacagcg tccgacagtt
    14161 aatgcttaaa acagcgcctt aagtcgttcc agcacttgca tggcgctgta gtaatccagg
    14221 cggaacgtct cggttcccag cgcataaacc tgcttgtttt gtactgcggg caggtgcgcg
    14281 agcagtggat tggcataaat cgcatcggcg tctttctgat caccggcgaa caggaatagt
    14341 gactcgccat ttaaccctgc agccagattt tctccaccaa gctgaatgat gtcatggcgt
    14401 ttgccctggc tttggctggc gtttaaccct gtgggcaatt tcgccagcgt aaagccgagt
    14461 tgttccagca tctgcccttg tgctgattcc ggcgtccaga gattggcact gtgtgcagcg
    14521 gcggtataga caatagcagt gaccggctgc ggcggtaatt tgatttgctc tttcgccgct
    14581 gccagttgct tatcaaactg tgcaatccgc tctgccgctt gtttctcatg cccggtaatt
    14641 tcgccaagct gcgttaacag cgactgccag cttttgtcgt cgtaattgat gattaatgtc
    14701 ggggcgatgg tggaaagctg atcatacagc gccagcgccg aatccccgcc ggttgcgcta
    14761 attaaaatca gatccggcat ttgcgcggca acggcttcgg cgctcggttc gccgatatag
    14821 agccgttgta gtttgcgttc tttcgccacc ttgctccact ggcgtaaaaa gccctggtca
    14881 tccgcgacgc ggttatttgg cgtggtcgcg ccgctggcaa tcaccggagc atcaatcgcc
    14941 agcagtgagc cggtcagggt gacgctggtg gaaacaatac gctgcggctg gctttccagg
    15001 gtatgagtgc cccggctgtc agtaatctga cgcggccagt cggcggcctg aactgcggct
    15061 attccggaaa gcaaaagtcc tgttaataga agggcgttgc ggtagagcgg ggcgagtctc
    15121 acaaatcagc ttcctgttat taataaggtt aagggcgtaa tgacaaattc gacaaagcgc
    15181 actatccgta ccctctcccc tttggggaga gggttagggg gatgggaaca gccagcactg
    15241 gtgcgaatat tgaccctcac cccagccctc tccctggaag ggagaggggg aagaacggcg
    15301 caggacatca cattgcgctt atgcgaatcc atcaataatg cttctcattt tcattgtaac
    15361 cacaaccaga tgcaaccccg agttgcagat tgcgttacct caagagttga catagtgcgc
    15421 gtttgctttt aggttagcga ccgaaaatat aaatgataat cattattaaa gcctttatca
    15481 ttttgtggag gatgatatgg atacgtcact ggctgaggaa gtacagcaga ccatggcaac
    15541 acttgcgccc aatcgctttt tctttatgtc gccgtaccgc agttttacga cgtcaggatg
    15601 tttcgcccgc tttgatgaac cggctgtgaa cggggattcg cccgacagtc ccttccagca
    15661 aaaactcgcc gcgctgtttg ccgatgccaa agtgcagggc atcaaaaatc cggtgatggt
    15721 cggggcgatt cccttcgatc cacgtcagcc ttcgtcgctg tatattcctg aatcctggca
    15781 gtcgttctcc cgtcaggaaa aacaagcttc cgcccgccgt ttcacccgca gccagtcgct
    15841 gaatgtggtg gaacgccagg caattccgga acaaaccacg tttgaacaga tggttgcccg
    15901 cgctgccgca cttaccgcca cgccgcaggt cgacaaagtg gtgttgtcac ggttgattga
    15961 tatcaccact gacgccgcca ttgatagtgg cgtattgctg gaacggttga ttgcgcaaaa
    16021 cccggttagt tacaacttcc atgtcccgct ggctgatggt ggcgtcctgc tgggggccag
    16081 cccggaactg ctgctacgta aagacggcga gcgttttagc tccattccgt tagccggttc
    16141 cgcgcgtcgt cagccggatg aagtgctcga tcgcgaagcg ggtaatcgtc tgctggcgtc
    16201 agaaaaagat cgccatgaac atgaactggt gactcaggcg atgaaagagg tactgcgcga
    16261 acgcagtagt gagttacacg ttccctcctc tccacaattg attaccacgc cgacgctgtg
    16321 gcatctcgca actccctttg aaggtaaagc gaattcgcaa gaaaacgcac tgactctggc
    16381 ctgtctgctg catccgaccc ccgcgctgag cggtttcccg catcaggccg cgactcaggt
    16441 tattgctgaa ctggagccgt tcgaccgcga actgtttggc ggcattgtgg gttggtgtga
    16501 cagcgaaggt aacggcgaat gggtggtgac catccgctgc gcgaagctgc gggaaaatca
    16561 ggtgcgtctg tttgccggag cggggattgt gcctgcgtcg tcaccgttgg gtgagtggcg
    16621 cgaaacaggc gtcaaacttt ctaccatgtt gaatgttttt ggattgcatt aaggagcgag
    16681 gatgagcatt ccattcaccc gctggccgga agagtttgcc cgtcgctatc gggaaaaagg
    16741 ctactggcag gatttgccgc tgaccgacat tctgactcgc cacgctgcga gtgacagcat
    16801 cgcggttatc gacggcgagc tacagttgag ttaccgggag ctgaatcagg cggcggataa
    16861 cctcgcgtgt actttacgcc gtcagggcat taaacctggt gaaaccgcgc tggtacaact
    16921 gggtaacgtc gctgaattgt atattacctt tttcgcgctg ctgaaactgg gcgttgcgcc
    16981 ggtgctggcg ttgttcagcc atcagcgtag tgaactgaac gcctatgcca gccagattga
    17041 acccgcattg ctgattgccg atcgccaaca tgcgttgttt agcggggatg atttcctcaa
    17101 tactttcgtc acagaacatt cctccattcg cgtggtgcaa ctgcacaacg acagcggtga
    17161 gcataacttg caggatgcga ttaaccatcc ggcagacggt tttactgcca cgccatcacc
    17221 tgctgatgaa gtggcctatt tccagctttc cggcggcacc accggtacac cgaagctgat
    17281 cccgcgcact cataacgact actactacag cgtgcgtcgt agcgtcgaga tttgtcagtt
    17341 cacacaacag acgcgctacc tgtgcgcgat cccggcggct cataactacg ccatgagttc
    17401 gccaggatcg ctgggcgtct ttcttgccgg aggaacggtt gttctggcgg ccgatcccag
    17461 cgctacgctt tgcttcccat tgattgaaaa acatcaggtg aacgtcaccg cgctggtgcc
    17521 gccggcagtc agcctgtggt tgcaggcgct ggctgaaggc gaaagccggg cgcagcttgc
    17581 ctcgctgaaa ctgttacagg tcggcggcgc acgtctttct gccacccttg cggcgcgtat
    17641 tcccgctgag attggctgcc agttgcagca ggtgtttggc atggcggaag ggctggtgaa
    17701 ctacacccgt cttgatgata gcgcggagaa aattatccat acccagggtt acccaatgtg
    17761 tccggacgat gaagtgtggg ttgccgatgc cgaaggaaat ccactgccgc aaggggaagt
    17821 cggacgcctg atgacgcgcg ggccgtacac cttccgcggt tattacaaaa gtccgcagca
    17881 caatgccagc gcctttgatg ccaacggttt ttactgttcc ggcgatctga tctctattga
    17941 tccagagggt tacatcaccg tgcaggggcg cgagaaagat cagatcaacc gtggcggcga
    18001 gaagatcgct gccgaagaga tcgaaaacct gctgctgcgc catccggcgg tgatctatgc
    18061 cgcactggtg agcatggaag atgagctgat gggcgaaaaa agctgtgctt atctggtggt
    18121 aaaagagccg ctgcgcgcgg tgcaggtgcg tcgtttcctg cgtgaacagg gtattgccga
    18181 atttaaatta ccggatcgcg tggagtgtgt agattcactt ccgctgacgg cggtcgggaa
    18241 agtcgataaa aaacaattaa gtcagtggct ggcgtcacgc gcatcagcct gaaggagaga
    18301 acacgatggc tattccaaaa ttacaggctt acgcactgcc ggagtctcac gatattccgc
    18361 agaataaagt tgactgggcc tttgaactgc aacgtgccgc gttgttaatc catgatatgc
    18421 aggactattt tgtcagcttc tggggcgaga actgcccgat gatggagcag gtgatcgcga
    18481 atattgctgc gctgcgcgac tactgcaaac agcacaatat cccggtttat tacaccgtcc
    18541 agccgaaaga gcagagcgat gaagatcggg cgctgttgaa tgatatgtgg gggccgggcc
    18601 tgacccgttc gccggaacag caaaaggtgg tggatcgcct gacgccagat gccgacgaca
    18661 cggtgctggt gaagtggcgc tacagcgcgt ttcatcgttc tccgctggag caaatgctca
    18721 aagagagtgg acgtaaccag ctgattatta ccggggtata tgcccacatt ggctgtatga
    18781 ccaccgcaac cgacgcattt atgcgcgata ttaaaccgtt tatggtggcg gatgcgctgg
    18841 ccgatttcag ccgtgacgag catttgatgt cgctgaaata tgtggccggg cggtctggcc
    18901 gggtggtgat gactgaagaa ttactgccag cacctgtccc cgccagcaaa gcggcgctgc
    18961 gtgaggttat cctgccgttg ctggacgagt ccgatgaacc gttcgatgac gacaacctga
    19021 tcgactacgg tctggattcg gtgcgcatga tggcgctggc ggcgcgctgg cgcaaagtgc
    19081 atggtgatat cgactttgtc atgctggcga aaaaaccgac catcgacgcc tggtggaagc
    19141 tactctcccg cgaggttaaa taatggattt cagcggtaaa aatgtctggg taaccggcgc
    19201 aggtaaaggt atcggctacg ccacggcgct ggcgtttgtt gaggcgggag cgaaagttac
    19261 aggttttgat caagcgttca ctcaggagca atatcccttt gcgaccgaag taatggatgt
    19321 tgccgacgcc gggcaggtgg cgcaggtatg tcagcgactg ttagctgaaa cggagcgact
    19381 ggacgtgctg atcaatgcgg cgggaatttt gcgcatgggc gcgaccgatc agctcagtaa
    19441 agaggactgg cagcagactt ttgcggttaa cgtcggcggt gcgtttaacc tgttccagca
    19501 aaccatgaac cagtttcgcc gtcagcgggg cggggcgatt gtcactgtgg cgtccgacgc
    19561 cgcacacacg ccgcgtattg gtatgagtgc ttatggcgca tcgaaagcgg cgctgaaaag
    19621 cctggcgttg agcgtcgggc tggaactggc gggtagcggc gtgcgctgta atgtggtttc
    19681 gcctggctcc accgacaccg atatgcaacg cacgctgtgg gtgagcgatg acgccgaaga
    19741 acagcgtatt cgcggctttg gcgagcagtt taaactcggc attccgctgg ggaaaatcgc
    19801 ccgtccacaa gagatcgcca acacgatttt gttcctcgcc tctgacctcg ccagccatat
    19861 caccctacag gatattgtgg tcgatggcgg ctcaacgctg ggggcataag catgatctgg
    19921 aaacgccatt taacgctcga cgaactgaac gccaccagcg ataacacaat ggtggcgcat
    19981 ctgggaattg tgtatacccg tctgggagat gatgtgctgg aagccgaaat gccggttgat
    20041 acccgtactc atcagccgtt tggcctgctg catggcggcg cgtcggcggc gctggctgaa
    20101 acgctgggat cgatggccgg atttatgatg acccgtgacg ggcagtgtgt ggtgggcacg
    20161 gaacttaacg ccacccatca tcgcccggtg tctgaaggca aggtacgcgg cgtctgccag
    20221 ccgctgcatc ttgggcggca aaatcagagc tgggaaatcg tcgttttcga tgaacagggg
    20281 cggcgttgct gcacttgtcg gctgggtacg gcagttttgg gatgagcccg acagaattaa
    20341 atgagattgc aggaaaactc ggttaacgga gtgatcgagt taacattgtt aagttaaata
    20401 ttggtttcaa ctccgattta catagttacc gtgttgttaa atcgtacaaa gatgttatag
    20461 aaacaaaatg taacatctct atggacacgc atacggataa caactatgaa caaatcaggg
    20521 aaatacctcg tctggacagt gctctctgta atgggagcat ttgctctggg atacattgct
    20581 ttaaatcgtg gggaacagat caacgcgctg tggattgtgg tggcgtcggt ctgtatctat
    20641 ctgatcgctt accgttttta tgggttgtat atcgccaaaa atgtgctggc ggttgacccg
    20701 aagcgtatga cgccagcggt gcgccataac gacgggctgg actatgtgcc gacggacaag
    20761 aaagtgctgt tcggtcacca ttttgcggcc atcgccggag caggtccgtt ggttgggccg
    20821 gtgctggcag cgcaaatggg ctacctgccg gggatgatct ggctactcgc cggggtggtt
    20881 ctcgccggtg cggtgcagga tttcatggtg ctgtttgttt ctacgcgccg tgacggtcga
    20941 tcgctgggtg agctggtcaa agaagagatg gggccaaccg ccggggtgat agcgctggtg
    21001 gcctgcttta tgatcatggt cattatcctt gcagtactgg cgatgatcgt ggtgaaagcc
    21061 ctgactcata gcccgtgggg aacgtatacc gttgcgttca ccattccgct ggcgctgttt
    21121 atggggatct acctgcgcta tctgcgtctg gggcgtattg gtgaagtgtc ggtcatcggt
    21181 ctggtattcc tgattttcgc cattatctct ggcggcaggg tggcagaaag tccgacctgg
    21241 gcaccgtact ttgactttac cggcgtgcag ctgacctgga tgctggtggg ttacggtttt
    21301 gtggcggcgg tgctgccggt gtggttgctg ctggccccgc gtgactacct ctctaccttc
    21361 ctgaaaatcg ggacgatcgt cggtctggcg gtaggcattt tgattatgcg cccgacgctg
    21421 accatgcctg cgctgaccaa atttgtcgat ggcactggcc cggtatggac cggtaacctg
    21481 ttcccgttcc tgtttatcac catcgcctgt ggcgcggtgt ctggcttcca tgcgctgatc
    21541 tcttccggca ccacgccgaa gatgctggcg aacgaagggc aggcttgttt tatcggctac
    21601 ggtggaatgt taatggaatc cttcgtggcg attatggcgc tggtttccgc ctgtatcatc
    21661 gatccgggcg tttactttgc catgaacagc ccaatggcgg tgctggctcc ggcagggacg
    21721 gcggatgtgg tcgcttctgt cgcgcaggtg gtgagtagct ggggctttag cattacacca
    21781 gatacgctca accagattgc cagcgaagtg ggtgaacagt cgatcatttc ccgtgcgggc
    21841 ggtgcgccga cgttggcggt ggggatggct tacatcctgc acggtgcgct gggtggtatg
    21901 atggatgtgg cgttctggta tcacttcgcc attctgtttg aagctctgtt tattctgacg
    21961 gcggtagatg cgggtacgcg tgctgcgcgc tttatgttgc aggatctgct gggcgtggtg
    22021 tctcctggcc tgaagcggac cgattcactg cctgctaacc tgctggcaac ggcgctgtgc
    22081 gtactggcgt ggggctactt cctccatcag ggcgtggtcg atccgctggg cggtattaac
    22141 actctgtggc cgctgtttgg tattgccaac cagatgctgg cagggatggc gctgatgctc
    22201 tgtgccgtgg tgttgttcaa gatgaaacgt caacgttacg cctgggcggc gctggtacca
    22261 acggcctggc tgctgatttg taccctgacc gctggctggc agaaagcgtt tagcccggat
    22321 gcgaaagtcg gcttcctagc cattgctaac aagttccagg caatgatcga cagcggcaat
    22381 attccgtcgc agtatactga gtcacagctg gcgcaactgg tgttcaacaa ccgtctggat
    22441 gccgggttaa ccatcttctt tatggtggtc gtggtggttc tggcactgtt ctcgattaag
    22501 acggcacttg cggcattgaa agatccgaag ccaacggcga aagaaacgcc gtatgagccg
    22561 atgccggaaa atgtcgagga gatcgtagcg caggcgaaag gcgcgcacta aagtcagagt
    22621 gaggggggat gttggcgaat gttggcatag tgccgagggt tccccctcac cctaaccctc
    22681 tccccgatgg ggcgagggga ctgaccgagt gcgttgatag catttgtagg ccggataaag
    22741 cgttcacgcc gcatccggca ctctttcagc aacatggtta gcggaggcca agatgtttga
    22801 ttcactggca aaagccggaa aatatttagg tcaggcggcg aagctgatga ttggtatgcc
    22861 tgattacgac aactatgtcg aacatatgcg ggttaaccat cccgatcaaa cgccgatgac
    22921 ctacgaggag tttttccgtg agcggcagga cgcgcgctac ggtggaaaag gcggcgcgcg
    22981 ctgctgctaa atttgcacgt caggctttaa acgattccac tttttcgaac gctgcacgca
    23041 acgtatctgg tgtcagcgtg actggcaggt aatgaatgga ctccaccggg cgcaaggtgt
    23101 gggcaatcac tttgtcgatc tccgcctgat tattgatatc cacttccagc tccgccagcg
    23161 tagtcggcag atgaaaacgc tgatacgccc cggttaattg cgccagcaca tcatcctgac
    23221 ccagcaaggc gctttgcacc agaattccgt aagcgacttt ggtgccgtga agaaacttct
    23281 cggtttgcgg caggacagtc agaccgttat gcacggcatg agccgccgcc acacgcgtaa
    23341 aacgatcgcc cagaccaccg accatcccac caccagcaat aatagcatcc accacatcgc
    23401 aaaatgattg cgttaactgc tgattttgct gatcggcaag tgcctgttcg ctactgttta
    23461 acaagacgtc gtgaatggcc tgcgcattat tgatccccag ccgcacggtt agcggcaacg
    23521 tttctggttg cggagccagc accaccgctt cataccattt cgccagcgtg tcaccgatcc
    23581 ccgccagcag atattgttgc ggtgcattga ggataatctc cggttccacc agcaccataa
    23641 aattggcgtc gtcgaaaatc tcataatgca gcgcctgtcc ggcatcgtta taccagacgg
    23701 agagcggtgt ccaggcggcg caggtagcgg cgatcgtcgg aacggcaaca aatggcagac
    23761 cgagacggcg ggcgagggct ttcgcggtgt cgagcagtgc gccgccgccg acgccaatca
    23821 ccacgctgcg atcgtcaccg gactcagccg ccagttgctg tacatcgctt tcgctgcaat
    23881 gaccacgaaa caaaatatgc tttgcccctg gaagtccaaa cgctggcgga agtttggttt
    23941 gcgccacagc aatggcgcgt ttgccgtaga tccacaccgc gcgagaaagt tgttcatcag
    24001 tgaaaaaatc gttcaggtga ttgaaacttc ttggatgtga aaagtagtta gccgggccga
    24061 cgaccacgcg gataggattg tgaggcatgt tgtgttgtcc ttattgtttt atttagacat
    24121 ctaaacgtct tgattgccaa atactagcat cgtgttatag tgccttcaac acgcaacttc
    24181 gtcaggtaca ataaaaatga caaataaccc tctgattcca caaagcaaac ttccacaact
    24241 tggcaccact attttcaccc agatgagcgc gctggcgcag caacaccagg cgattaacct
    24301 gtcgcaaggc tttcctgatt ttgatggtcc gcgctattta caggagcggc tggcgtacca
    24361 cgttgcccag ggggcaaacc aatacgcgcc catgaccggc gtgcaggcct tgcgcgaggc
    24421 gattgctcag aaaacggaac gtttgtatgg ctatcaacca gatgccgata gcgatatcac
    24481 cgtaacggca ggggcgacgg aagcgttata cgcggcgatt accgcactgg tgcgcaatgg
    24541 cgatgaagtg atttgttttg atcccagcta tgacagttac gcccccgcca tcgcgctttc
    24601 tgggggaata gtgaagcgta tggcactgca accaccttga ctggcaggaa tttgccgcat
    24661 tattaagcga gcgcaccaga ctggtgatcc tcaacactcc gcataacccc agtgcaactg
    24721 tctggcagca ggctgatttc gccgctttgt ggcaggcgat cgccgggcac gagatttttg
    24781 tcattagcga tgaagtctac gagcacatca acttttcaca acagggccat gccagtgtgc
    24841 tggcgcatcc gcagctgcgt gagcgggcag tggcggtttc ttcatttggc aagatctatc
    24901 atatgaccgg ctggaaagtg ggttattgtg ttgcgccagc gcccatcagc gccgaaattc
    24961 gcaaggtaca tcagtatctg accttttcgg tgaatacccc ggcacagctg gcgcttgctg
    25021 atatgctacg tgcagaacct gagcattatc ttgcgttacc ggacttttat cgccagaagc
    25081 gcgatattct ggtgaatgct ttaaatgaaa gccggctgga gattttaccg tgtgaaggta
    25141 catacttttt gctggtggat tacagcgagg tttctaccct ggatgatgtt gagttttgcc
    25201 agtggctgac gcgggagcac ggcgtggcgg cgattccgct gtcggtgttt tgcgccgatc
    25261 ccttcccaca taaactgatt cgtctctgtt ttgccaagaa ggaatcgacg ttgctggcag
    25321 cagctgaacg cctgcgccag ctttagctat ttaaccgtcc aggcgcggga atattgacgg
    25381 tcggcaaaca actcttgcag gccgttaatt tgcttcaggc gcagcacttc gtcgctgtcc
    25441 attcccagct ctttgccaat tttattatcg tcccatccca actggctaag ttcacggacg
    25501 atttccgaca tggcggtgat ttgatggcgt ccacgagcgc gattatgacg aatagtcgcg
    25561 gcgatgcgtt gattacgcgt accttccaga caggtcaccg gcaaataacc ttttaagcgt
    25621 aattttaatg atgatgag
//
LOCUS       DADMHC010000040        25288 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.040, whole genome shotgun sequence.
ACCESSION   DADMHC010000040 DADMHC010000000
VERSION     DADMHC010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 25288)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25288)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25288
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.040"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(221..691)
                     /locus_tag="JNZ57_001373"
     CDS             complement(221..691)
                     /locus_tag="JNZ57_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308538.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827647.1"
                     /translation="MTEIQRLLTETIESLNTREKRDNKPRFSISFIRKHPGLFIGMYV
                     AFFATLAVMLQSETLSGSVWLLVVLFILLNGFFFFDVYPRYRYEDIDVLDFRVCYNGE
                     WYNTRFVPAALVEAILNSPRVADVHKEQLQKMIVRKGELSFYDIFTLARAESTS"
     gene            complement(807..1358)
                     /gene="maa"
                     /locus_tag="JNZ57_001374"
     CDS             complement(807..1358)
                     /gene="maa"
                     /locus_tag="JNZ57_001374"
                     /EC_number="2.3.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose O-acetyltransferase"
                     /protein_id="HAY8827648.1"
                     /translation="MSTEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHT
                     LRQQILADLFGQVTEAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCML
                     APGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGA
                     VVTKGVPDNVVVGGNPARIIKKL"
     gene            complement(1530..1748)
                     /gene="hha"
                     /locus_tag="JNZ57_001375"
     CDS             complement(1530..1748)
                     /gene="hha"
                     /locus_tag="JNZ57_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin expression modulator Hha"
                     /protein_id="HAY8827649.1"
                     /translation="MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFY
                     SAADHRLAELTMNKLYDKIPSSVWKFIR"
     gene            complement(1774..2148)
                     /gene="tomB"
                     /locus_tag="JNZ57_001376"
                     /pseudo
     CDS             complement(1774..2148)
                     /gene="tomB"
                     /locus_tag="JNZ57_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001741190.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Hha toxicity modulator TomB"
     gene            complement(2694..5843)
                     /locus_tag="JNZ57_001377"
     CDS             complement(2694..5843)
                     /locus_tag="JNZ57_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HAY8827650.1"
                     /translation="MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVT
                     ISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADI
                     AQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAA
                     NMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQ
                     LGGTPPVKGQQLNASIIAQTRLTSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYD
                     IIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVK
                     ISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLS
                     AVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATMLKPIAKGDHGEG
                     KKGFFGWFNRMFEKSTHHYTDSVGGILRSTGRYLVLYLIIVVGMAYLFVRLPSSFLPD
                     EDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLTKEKNNVESVFAVNGFGFAGRGQNT
                     GIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKDAMVFAFNLPAIVELGTATGFDF
                     ELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNGLEDTPQFKIDIDQEKAQALG
                     VSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQM
                     VPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMELMEQLASKLPTGVG
                     YDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALL
                     AATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRL
                     RPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVVR
                     RRFSRKNEDIEHSHTVDHH"
     gene            complement(5866..7059)
                     /gene="acrA"
                     /locus_tag="JNZ57_001378"
     CDS             complement(5866..7059)
                     /gene="acrA"
                     /locus_tag="JNZ57_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit AcrA"
                     /protein_id="HAY8827651.1"
                     /translation="MNKNRGFTPLAVVLMLSGSLALTGCDDKQAQQGGQQMPAVGVVT
                     VKTEPLQITTELPGRTSAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQ
                     ATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAA
                     KAAVETARINLAYTKVTAPISGRIGKSNVTEGALVQNGQATALATVQQLDPIYVDVTQ
                     SSNDFLRLKQELANGTLKQENGKAKVSLITSDGIKFPQDGTLEFSDVTVDQTTGSITL
                     RAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVTRTPRGDATVLVVGADDKVET
                     RPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQVKAQEVTADNNQQAASGAQP
                     EQSKS"
     gene            7201..7848
                     /gene="acrR"
                     /locus_tag="JNZ57_001379"
     CDS             7201..7848
                     /gene="acrR"
                     /locus_tag="JNZ57_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter transcriptional
                     repressor AcrR"
                     /protein_id="HAY8827652.1"
                     /translation="MARKTKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVT
                     RGAIYWHFKDKSDLFSEIWELSESNIGELELEYQAKFPGDPLSVLREILIHVLESTVT
                     EERRRLLMEIIFHKCEFVGEMAVVQQAQRNLCLESYDRIEQTLKHCIEAKMLPADLMT
                     RRAAIIMRGYISGLMENWLFAPQSFDLKKEARDYVAILLEMYLLCPTLRNPATNE"
     gene            7976..11338
                     /gene="mscK"
                     /locus_tag="JNZ57_001380"
     CDS             7976..11338
                     /gene="mscK"
                     /locus_tag="JNZ57_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel MscK"
                     /protein_id="HAY8827653.1"
                     /translation="MTMFQYYKRSRHFVFSAFIAFVFVLLCQNTAFARASSNGDLPTK
                     ADLQAQLDSLNKQKDLSAQDKLEQQDLTDTLATLDKIDRIKEETVQLRQKVAEAPEKM
                     RQATAALTALSDVDNDEETRKILSTLSLRQLETRVAQALDDLQNAQNDLASYNSQLVS
                     LQTQPERVQNAMYNASQQLQQIRSRLDGTDVGETALRPSQKVLMQAQQALLNAEIDQQ
                     RKSLEGNTVLQDTLQKQRDYVTANSARLEHQLQLLQEAVNSKRLTLTEKTAQEAVSPD
                     EAARIQANPLVKQELEINQQLSQRLITATENGNQLMQQNIKVKNWLERALQSERNIKE
                     QIAVLKGSLLLSRILYQQQQTLPSADELENMTNRIADLRLEQFEVNQQRDALFQSDAF
                     VNKLEEGHTNEVNSEVHDALLQVVDMRRELLDQLNKQLGNQLMMAINLQINQQQLMSV
                     SKNLKSILTQQIFWVNSNRPMDWDWIKAFPQSLKDEFKSMKITVNWEKAWPAVFIAFL
                     AGLPLLLIAGLIHWRLGWLKAYQQKLASAVGSLRNDSQLNTPKAILIDLIRALPVCLI
                     ILAVGLILLTMQLNISELLWSFSKKLAIFWLVFGLCWKVLEKNGVAVRHFGMPEQQTS
                     HWRRQIVRISLALLPIHFWSVVAELSPLHLMDDVLGQAMIFFNLLLIAFLVWPMCRES
                     WRDKESHTMRLVTITVLSIIPIALMVLTATGYFYTTLRLSGRWIETVYLVIIWNLLYQ
                     TVLRGLSVAARRIAWRRALARRQNLVKEGAEGAEPPEEPTIALEQVNQQTLRITMLLM
                     FALFGVMFWAIWSDLITVFSYLDSITLWHYNGTEAGAAVVKNVTMGSLLFAIIASMVA
                     WALIRNLPGLLEVLVLSRLNMRQGASYAITTILNYIIIAVGAMTVFGSLGVSWDKLQW
                     LAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGSFSGTVSKIRIRATTIT
                     DFDRKEVIIPNKAFVTERLINWSLTDTTTRLVIRLGVAYGSDLEKVRKVLLKAATEHP
                     RVMHEPMPEVFFTAFGASTLDHELRLYVRELRDRSRTVDELNRTIDQLCRENDINIAF
                     NQLEVHLHNEKGDEVTEVKRDYKGDDPTPAVG"
     gene            complement(11550..11711)
                     /gene="rsmS"
                     /locus_tag="JNZ57_001381"
     CDS             complement(11550..11711)
                     /gene="rsmS"
                     /locus_tag="JNZ57_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pleiotropic regulatory protein RsmS"
                     /protein_id="HAY8827654.1"
                     /translation="MSLENAPDDVKLAVDLIVLLEENQIPARTVLRALDIVKRDYEKK
                     LTRDDEAEK"
     gene            complement(11725..12252)
                     /gene="priC"
                     /locus_tag="JNZ57_001382"
     CDS             complement(11725..12252)
                     /gene="priC"
                     /locus_tag="JNZ57_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N''"
                     /protein_id="HAY8827655.1"
                     /translation="MKTALLLEKLEGQLATLRQRCAPVAQFATLSARFDRHLFQTRAT
                     TLQACLDEAGDNLAALRHAVEQQQLPQVAWLAEHLAAQLEAIAREASAWSLREWDSAP
                     PKIARWQRKRIQHQDFERRLREMVAERRARLARVTDLVEQQTLHREVEAYEARLARCR
                     HALEKIENRLARLTR"
     gene            12322..12699
                     /locus_tag="JNZ57_001383"
                     /pseudo
     CDS             12322..12699
                     /locus_tag="JNZ57_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308548.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF454 family protein"
     gene            12852..13403
                     /gene="apt"
                     /locus_tag="JNZ57_001384"
     CDS             12852..13403
                     /gene="apt"
                     /locus_tag="JNZ57_001384"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HAY8827656.1"
                     /translation="MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALS
                     IDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDL
                     EYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFD
                     LGGEQRLEKQGITSYSLVPFPGH"
     gene            13532..15463
                     /gene="dnaX"
                     /locus_tag="JNZ57_001385"
     CDS             13532..15463
                     /gene="dnaX"
                     /locus_tag="JNZ57_001385"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HAY8827657.1"
                     /translation="MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFS
                     GTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVE
                     DTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQ
                     KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDAL
                     SLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGI
                     EWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLI
                     GRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEPEVLRQSFAPVAPTAVMTPTQVPPQ
                     PQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERL
                     ASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPE
                     LAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNR
                     GAQQKLAEALSTLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNI
                     QTLRRFFDAELDEESIRPI"
     gene            15516..15845
                     /locus_tag="JNZ57_001386"
     CDS             15516..15845
                     /locus_tag="JNZ57_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001364632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HAY8827658.1"
                     /translation="MFGKGGLGNLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKV
                     TINGAHNCRRVEIDPSLLEDDKEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLP
                     PGFKMPF"
     gene            15845..16450
                     /gene="recR"
                     /locus_tag="JNZ57_001387"
     CDS             15845..16450
                     /gene="recR"
                     /locus_tag="JNZ57_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HAY8827659.1"
                     /translation="MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLA
                     QALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFS
                     GRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAEL
                     CAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKIRF"
     gene            16560..18434
                     /gene="htpG"
                     /locus_tag="JNZ57_001388"
     CDS             16560..18434
                     /gene="htpG"
                     /locus_tag="JNZ57_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003903109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HAY8827660.1"
                     /translation="MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAAD
                     KLRFRALSNPDLYEGDGELCVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGT
                     KSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEG
                     EYTVADITKEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDG
                     ETVISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTS
                     LLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNV
                     SREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPAEDFAN
                     QEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELL
                     RKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKAL
                     TPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEVKY
                     IFELNPDHVLVKRAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLVS
                     "
     gene            18615..19259
                     /gene="adk"
                     /locus_tag="JNZ57_001389"
     CDS             18615..19259
                     /gene="adk"
                     /locus_tag="JNZ57_001389"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HAY8827661.1"
                     /translation="MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSE
                     LGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGIN
                     VDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQ
                     EETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKILG"
     gene            19391..20353
                     /gene="hemH"
                     /locus_tag="JNZ57_001390"
     CDS             19391..20353
                     /gene="hemH"
                     /locus_tag="JNZ57_001390"
                     /EC_number="4.99.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HAY8827662.1"
                     /translation="MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLL
                     WWPLLRGVILPLRSPRVAKLYASVWMEGGSPLMVYSRQQQQALAQRLPETPVALGMSY
                     GSPSLESAVDELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIR
                     DYADNHDYINALANSVRASFAKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTREL
                     ASALGMAPEKVMMTFQSRFGREPWLMPYTDETLKMLGEKGVGYIQVMCPGFAADCLET
                     LEEIAEQNREVFLGAGGKKYEYIPALNATPEHIEMMANLVAAYR"
     gene            complement(20350..21309)
                     /gene="aes"
                     /locus_tag="JNZ57_001391"
     CDS             complement(20350..21309)
                     /gene="aes"
                     /locus_tag="JNZ57_001391"
                     /EC_number="3.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl esterase"
                     /protein_id="HAY8827663.1"
                     /translation="MKPENKLPVLDLISAEMKTVVNTLQPDLPSWPATGTIAEQRQYY
                     TLERRFWNAGAPEMATRAYMVPTKYGQVETRLFCPQPDSPATLFYLHGGGFILGNLDT
                     HDRIMRLLASYSQCTVIGIDYPLSPEARFPQAIEEIVAACCYFHQQAEDYQINMSRIG
                     FAGDSAGAMLALASALWLRDKQIDCGKIAGVLLWYGLYGLRDSVTRRLLGGVWDGLTQ
                     QDLQMYEEAYLSNDADRESPYYCLFNNDLTREVPPCFIAGAEFDPLLDDSRLLYQTLA
                     AHQQPCEFKLYPGTLHVFLHYSRMMKTADEALRDGAQFFTAQL"
     gene            21461..22765
                     /locus_tag="JNZ57_001392"
     CDS             21461..22765
                     /locus_tag="JNZ57_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inosine/guanosine kinase"
                     /protein_id="HAY8827664.1"
                     /translation="MKFPGKRKSKHYFPVNARDPLLQQFQPENETSAAWVVGIDQTLV
                     DIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNLITHQFAGGTIGNTMHNY
                     SVLADDRSVLLGVMCSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLIGESG
                     ERTFAISPGHMNQLRAESIPEDVIAGASALVLTSYLVRCKPGEPMPEATMKAIEYAKK
                     YNVPVVLTLGTKFVIAENPQWWQQFLKDHVSILAMNEDEAEALTGESDPLLASDKALD
                     WVDLVLCTAGPIGLYMAGFTEDEAKRKTQHPLLPGAIAEFNQYEFSRAMRHKDCQNPL
                     RVYSHIAPYMGGPEKIMNTNGAGDGALAALLHDITANSYHRSNVPNSSKHKFTWLTYS
                     SLAQVCKYANRVSYQVLNQHSPRLTRGLPEREDSLEESYWDR"
     gene            complement(22898..24574)
                     /locus_tag="JNZ57_001393"
     CDS             complement(22898..24574)
                     /locus_tag="JNZ57_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Kef family K(+) transporter"
                     /protein_id="HAY8827665.1"
                     /translation="MHHATPLITTIVGGLVLAFILGMLANKLRISPLVGYLLAGVLAG
                     PFTPGFVADTKLAPELAELGVILLMFGVGLHFSLKDLMAVKAIAIPGAIAQIAVATLL
                     GMALSAVLGWSLMPGIVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLV
                     MVLTLVLLPAVAGMMEQGDVGFATLAVDMGITIGKVIAFIAIMMLVGRRLVPWIMARS
                     AATGSRELFTLSVLALALGIAFGAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLP
                     LRDAFAVLFFVSVGMLFDPLILIQQPLAVLATLAIILFGKSLAAFFLVRLFGHSQRTA
                     LTIAASLAQIGEFAFILAGLGMALNLLPQAGQNLVLAGAILSIMLNPVLFALLEKYLA
                     KTKTLEEQTLEEAIEEEKQIPVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR
                     TRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPD
                     IEIIARAHYDDEVAYITERGANQVVMGEREIARTMLELLETPPAGEVVTG"
     gene            complement(24812..>25288)
                     /locus_tag="JNZ57_001394"
     CDS             complement(24812..>25288)
                     /locus_tag="JNZ57_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8827666.1"
                     /translation="YYTFYLMQKFGLSIQNAQLHLFAFLFAVAAGTVIGGPVGDKIGR
                     KYVIWGSILGVAPFTLILPYASLHWTGVLTVIIGFILASALSAILVYAQELLPGRIGM
                     VSGLFFGFAFGMGGLGAAVLGLIADHTSIELVYKICAFLPLLGMLTIFLPDNRHKD"
BASE COUNT         6333 a         6571 c         6496 g         5888 t
ORIGIN      
        1 caatactgaa agaatcagta ctcccgaaat aaggccgacc agatgtcgtg ttctcaccag
       61 catatcctta ttaacacagt gtagggaaag tatatctgat tgtggaaaaa ggctggcagg
      121 agataaggag gtagagctgg tatttcatga agtgatgggt ggaaacgatc attgtcattt
      181 gaccaagcgc agagctttac gcctggtatg taaccctaac ttaagatgtt gattcggcgc
      241 gagcgagggt aaaaatatcg taaaaagaca gttcaccttt acggacgatc attttttgca
      301 gttgttcctt atgaacatcc gcgacacgcg gagagttcaa gatggcttca accagcgcgg
      361 caggtacaaa gcgcgtgttg taccattcgc cgttatagca aacgcggaaa tccagcacgt
      421 cgatatcttc atagcggtag cgtgggtaga catcgaaaaa gaagaaacca ttaagcagga
      481 taaataatac aaccagtagc cagacagagc ctgacagcgt ttcggactgc aacatcaccg
      541 ccagggtggc aaaaaaagca acgtacatac cgataaacag ccccggatgt ttacggataa
      601 aactgatact aaagcggggt ttgttgtcgc gtttttcgcg ggtattcaga gactcaatcg
      661 tttcggtcag caggcgttgt atttcggtca tcgtttgcct tcgtggtatc tgcaactttc
      721 cagggaacac cctattttaa cgtgggaata gtagagggga agtaacagat ctaccacaat
      781 tttgcataac agttgcgaaa aaccgattac aattttttaa ttattctggc tggattaccg
      841 cccacgacaa cgttgtccgg gacacctttt gtgacaactg cacctgaagc taccacgacg
      901 ttatcaccaa tggtcacacc agggttaatg accgcgcgtc cgccaatcca gacgttatta
      961 ccgatggtga cgggtttccc cagttcagca ccgctattac gtgctacagg gtcgatggga
     1021 tgtgttgccg tgtagatatg aacgcctggt gccaacatac agttatcacc gatgcgaata
     1081 gggcagacat caagcatcac gcaatcgaag ttggcgaaaa aattattgcc gagaaaaatg
     1141 ttatagccat aatcacagcg aaacgttggc tcaatataag cctctgtcac ctgaccgaat
     1201 aaatcagcga gaatttgctg gcgtaatgtg tgctcttccg ccagggaatg attgtatcgg
     1261 tgaataagct gacgagcgcg caggcgatcg cgagataacg tctcatctgc cgagcgatac
     1321 aactcaccag caatcatctt ttctttttct gtgctcatta ctgacctccg gttgctgaaa
     1381 atgcggcaac acagtaagac gaaaagtcag tgaacagaac gttcccatta catctgtgtg
     1441 ataaagatca catagggtat gtcttcatgg tgaaaaagta taaaattctt aataaacagc
     1501 cggttatagc tccgaaagcg aattatttat tagcgaataa atttccatac tgaggaaggg
     1561 atcttgtcgt atagtttatt catggtcaat tcggcgaggc ggtgatctgc ggctgagtaa
     1621 aataccgcca gttcattatc tgataattcg tatttatttt tctcgataac acgctccagc
     1681 gtgtcaattg tctggcaacg acgtaaacgc attaaataat cggttttcgt taaaggtttt
     1741 tcggacatac ttctacccat ggttgtaata attctaacaa gataaactcg caggattctc
     1801 tttcgtcgca ttgacaaaac aacggaatag tcgattacct gacttccgcc atttctgaag
     1861 atcctgcata ttaataccat aactactgaa caacataaag gtgtcatcca gatattcgtc
     1921 gatctgctca atgagcttat tgtcttcatt atacttaatt ttgtaattaa gtgcgaaggt
     1981 cgcaatatgc tcaatcagtt cattcaactg gaggttgatc gcctaggttg ggtcgttaac
     2041 ccagccataa ttgctttctt caaggtttgc aaggcagtca tgatacaggg tttcacagag
     2101 aaacttaagc tgtgcgatat catgtctttt gggtgagtat tcatccataa cgcgtcccct
     2161 tcttagcggt tgaactaacg gacacctttc gggatggaaa aaacttactg acctggactt
     2221 gccctctcgt ttgttagctt aactataagc cactctttgc aggttttcat cgcattatta
     2281 cgaaaaatta caattaggaa ggaatcggga caggacttac tttttcatac tagcactaac
     2341 ccgcagcagg taaaagcagt ttgctcgaac tgttcataac atttcaggat tatcgccaga
     2401 tgaaattggt gacactaata ccaggattgc tctgaatatg acgtaataac cgaggaatga
     2461 ataaagaatt accgcaaata attaagaata gcctctaaat gattatggat tattaaatct
     2521 attagcgcta cttaatataa attaactaac aatcagtatt ttttatgaat tttatccgtg
     2581 gttaatactg gttttcgtat gagatcctga gttggtggtt caattactcc ttaatgttcg
     2641 taggttatgc ataaaaaagg ccgcttgcgc ggccttagtg attacacgtt gtatcaatga
     2701 tgatcgacag tatggctgtg ctcgatatct tcattcttgc ggctaaagcg gcggcgaacc
     2761 accacaaaga ataccggaac gaagaagatt gccagtaccg ttgcggtcac catcccgccc
     2821 attacaccgg tacctactgc gttctgcgcg ccggaaccag caccagtact gataaccagc
     2881 ggcataacgc cgaggataaa cgccagcgag gtcatcagga tcggacgtaa acgcatccgc
     2941 actgcatcaa gcgtcgcttc aatcagacct ttaccttctt tatccatcaa gtctttggcg
     3001 aattcgacga taagtatcgc gttcttcgcc gacaacccaa tggttgtgag caggcctacc
     3061 tggaagtaaa cgtcattggt caggccacgg aaggtggcag ccagcaacgc accgataacc
     3121 cccagcggaa cgaccagcat aacggagaac ggaatcgacc agctctcgta cagcgccgcc
     3181 agacacagga atacgacaat caacgaaatc gcgtacagtg aaggtgcctg gttgccggag
     3241 aggcgttcct gataggacat ccccgtccag tcatagccaa caccggtagg cagtttgctc
     3301 gccagttgtt ccattagctc cattgcttca ccggtacttt tacccggtgc cgcctggcct
     3361 aagatttcca tggatggcag gccattgtaa cgttccagac gcggcgaacc gtactcccaa
     3421 cgagaagagg agaatgccga gaacggcacc atctgaccat cagcagcacg aacataccag
     3481 tcgccgatat catccggcag catacggtat ttcgcttctg acatgacgta aactttcttc
     3541 acacgaccgc ggtcgataaa gtcgttcaca tagctaccgc cccatgcagc gcccagagtg
     3601 gtgttaatgt cgttgataga aacacccagc gcctgcgctt tttcctggtc gatatcaatc
     3661 ttaaactgcg gggtatcttc cagaccgttt ggacgtacgc tggtcaacat atcaggatgc
     3721 tttgctgctt ctgcaagcag ctggttacgc gcctgagtca gtttttcgtg accaaggcca
     3781 gcctggtcaa tcagctcaaa gtcaaagccg gttgcagtac ccagttccac gattgcgggc
     3841 aggttaaagg cgaaaaccat cgcatctttg atttgcgaga aagcgcgtgt tgcacgcatg
     3901 gtaatcgctt caactttgtt ttcttcgccc ggacgatcgg cccagtcctt caaggaaacg
     3961 aacgcaatac cggtattctg accacgtccc gcaaagccga agccgttaac ggcgaacacc
     4021 gactcaacgt tgttcttttc tttggtcaga tagtaatgcg ttacctcatt gagcactttc
     4081 tgcgtacgtt cctgcgttgc acctgctggc agctgaacca tggtcataaa tacgccctgg
     4141 tcctcatctg gcaagaagga gcttggcaga cgcacgaaca gataggccat gccgaccacg
     4201 atgatcagat acagcaccag gtaacgcccc gtactgcgca gaataccgcc tacgctgtcg
     4261 gtgtagtggt gcgtgctctt ctcgaacatg cggttaaacc agccgaagaa gcctttttta
     4321 ccttccccgt gatcgccttt ggcaatcggt ttcagcatgg tggcacaaag agccggagtc
     4381 aggatcaacg ctaccagtac cgacagcgcc attgctgaaa caatggtaat agagaactga
     4441 cgatagatag caccagtaga accgccaaag aaggccatcg gtacgaatac cgctgacagt
     4501 accatcgcga taccgaccag agcgccctga atctgcccca tcgacttacg ggtagcttct
     4561 tttggcggca aaccttcttc cgccataaca cgctccacgt tttctaccac aacgatagcg
     4621 tcatccacca acaagccgat ggcgagcacc atcccgaaca ttgttagcgt gtttatcgag
     4681 aagccaaagg cggcaaggac ggcaaaggtc ccgagcaata ccaccggtac ggcaatggtc
     4741 ggaatcaacg tcgcgcggaa gttctgcagg aacagataca taaccaggaa cacgaggatg
     4801 atcgcttcga ccagcgtttt aaccacttcg tgaatagaga ttttcacgaa cggcgtggtg
     4861 tcgtacgggt aaacaatttt cagacccgac gggaagaacg gttccatctt cgccagttca
     4921 gcacggattg ccgcagcggt atccagcgca tttgcaccgg tcgccagctt gatccccaga
     4981 ccggaagccg gttggccgtt aaactctgcg atgatgtcgt agttctcacc acccagctca
     5041 atcttcgcca catcacgcag caggacgcgg gaaccatcct gattcacttt cagcaggatt
     5101 ttgccgaact cttcagtaga ggtcagacgc gtctgagcaa taatagaggc gttaagctgt
     5161 tggcctttca ccggcggcgt accaccgagc tgacccgccg caacctgggc gttctgcgct
     5221 ttgatggcgg taatgacatc aaccggcgtt agctggaatt tgttcagctc attcgggttc
     5281 atccagatac gcatcgcgta ctgtgaaccg aacaactgaa catcacccac gcccgacgta
     5341 cggctgatgg catctttcat attcgccgct acgtagtcag agatatcctc ctgcgtcatg
     5401 gtgccatcgg tgttgataac gccgacaacc atcaggaagc tgctggatga tttctcaacg
     5461 ctcacccctt gctgctgaac ttcttgcggc agcaacggca tcgccagctg cagtttgttc
     5521 tgcacctgaa cctgcgcgat atccgcatca gtaccagact caaaggtcag ggtgatctgc
     5581 acggtacccg tggagtcact gttagaggac atgtacatca ggttatcgat accgttcata
     5641 ttctgttcga taacctgtgt caccgtgtcc tgcactgttt tcgcatcagc gccggggtag
     5701 gaggcggaga tcgttactgc cggcggtgca atcgtaggat attgcgccac cggcagtttg
     5761 aggatcgcca gcccccctgc caacatgatg ataatggcga tcacccacgc aaaaatcggg
     5821 cgatcgataa agaaattagg catgtcttaa cggctcctgt ttaagttaag acttggactg
     5881 ttcaggctga gcaccgcttg cggcttgctg gttattatca gcggtaactt cttgtgcttt
     5941 tacctggaca ccaggacgca ctttctgcag cccacttatt actacgcgat cgcctgcttt
     6001 cagaccttct gtcaccagcc acttatcgcc aatagcctgg cttgcaacga tcggacgggt
     6061 ttccactttg tcatccgcgc caactaccag tacggtggca tcaccacgcg gcgtacgggt
     6121 tacgccctgt tgcgggacta aaatagcgtt tggattaagc ccttcttcca gacgtgcgcg
     6181 cacgaacata cccggcagca gagtgtgatc cgggttcggg aagatagcgc gtagggtgat
     6241 agacccagtg gtctgatcaa cggtaacgtc agagaattcc agcgtaccgt cctgcgggaa
     6301 cttaatgccg tcactggtga tcagcgacac tttggctttg ccgttctctt gtttcagcgt
     6361 gccattcgcc agttcctgtt tcaggcgcag gaagtcgttg ctggactggg tcacatcaac
     6421 gtagatcgga tcaagttgct gcacggttgc cagcgcagtc gcctgaccgt tctgtaccaa
     6481 tgcgccttcc gtcacgttcg acttaccaat gcgaccgcta atcggagcgg tgactttggt
     6541 gtaagccaga ttgatccgcg cagtttcaac ggcagctttc gccgcagtta ccgcagcatt
     6601 cgcctgttgc gcatcagcca gagcctgatc gtactcttgc ttactgatgt actgagtacc
     6661 gagcagtttc tgataacgat tcaccgtcaa ttgcgcgata ttggctgcag cctgggcttt
     6721 cgccagatca cctttcgcac tgtcgtatgt cgcctgatag gtcgcaggat caatctgata
     6781 gagagagaca ccagcttcga tgtcgctacc ttctttgaaa ttacgcttca ggataatccc
     6841 gctaacttga ggacgaactt ctgcgatccg gtaggcactg gtgcgacccg gaagctcggt
     6901 tgtgatctgc agaggttcag ttttgactgt tactacgcca acggcgggca tctgctggcc
     6961 accttgttgg gcctgtttgt cgtcacatcc tgttagggct aagctgcctg agagcatcag
     7021 aacgaccgcc agaggcgtaa accctctgtt tttgttcata tgtaaacctc gagtgtccga
     7081 tttcaaattg gtcaatggtc aaaagttaat aaacctattg ctgcgtttat attatcgtcg
     7141 tgctatggta catacattca caaatgtatg taaatctaac gcctgtaaat tcacgaacat
     7201 atggcacgaa aaaccaaaca agaagcgcaa gaaacgcgcc aacacatcct cgatgtggct
     7261 ctacgtcttt tctcacagca gggggtatca tccacctcgc tgggtgagat tgcaaaagca
     7321 gctggcgtta cgcgcggtgc aatctactgg cattttaaag acaagtcgga tttgttcagt
     7381 gagatctggg aactgtcaga atccaatatt ggtgaactag agcttgagta tcaggcaaaa
     7441 ttccctggcg atccactctc agtattaaga gagatattaa ttcatgttct tgaatccacg
     7501 gtgacagaag aacgacgtcg attattgatg gagattatat tccacaaatg cgaatttgtc
     7561 ggagaaatgg ctgttgtgca acaggcacaa cgtaatctct gtctggaaag ttatgaccgt
     7621 atagaacaaa cgttaaaaca ttgtattgaa gcgaaaatgt tgcctgcgga tttaatgacg
     7681 cgtcgggcag caattattat gcgcggctat atttccggcc tgatggaaaa ctggctcttt
     7741 gccccgcaat cttttgatct taaaaaagaa gcccgcgatt acgtcgccat cttactggag
     7801 atgtatctcc tgtgccccac gcttcgtaat cctgccacta acgaataacc ctgaatctga
     7861 ctccaggatt tttcctggac attttcgtcg ttgctattct ggttcactgc gtcgtgatat
     7921 tcttgcggtt tgactttttc aggtcgttct tcaggttcag aaaccttcat tcatcatgac
     7981 tatgttccag tattacaaac gatcacggca ttttgttttt tcagcattta ttgcttttgt
     8041 ttttgtcttg ttatgccaga acacggcgtt tgcgcgggcg tcatcgaatg gtgatctgcc
     8101 gacaaaagcg gacctgcagg cgcaacttga ctcactaaat aaacaaaaag atctttctgc
     8161 tcaggacaaa ctggagcagc aggatctgac agatacatta gccaccctcg ataaaatcga
     8221 tcgcataaaa gaagagacag ttcagctacg gcaaaaagtc gctgaagcgc cggaaaaaat
     8281 gcgccaggcg accgcggcgt taacagcact tagcgatgtc gataacgacg aagaaacgcg
     8341 caaaattctg agtacgcttt cgttgcgcca gctggaaact cgcgttgccc aggcgctgga
     8401 cgatttgcaa aacgcacaaa acgatctggc gtcttataac agccagctgg tttcgttaca
     8461 gacgcagccc gaacgcgtgc aaaatgcgat gtataacgct tcgcagcagc tgcaacaaat
     8521 tcgcagtcgt ctggatggga ctgatgtcgg cgagactgcc ttacgtccca gccagaaagt
     8581 gttaatgcag gctcagcagg cgttgctgaa tgcggagatt gaccagcagc gtaaaagcct
     8641 ggaagggaac accgtcttgc aggatacctt gcaaaagcaa cgtgattacg tgacggcgaa
     8701 cagcgcccgt ctggagcacc agttgcagct gttgcaagaa gcggtaaaca gcaagcgcct
     8761 gactttaact gaaaaaacgg cgcaggaagc cgtctccccg gatgaagccg cgcgtattca
     8821 ggctaatccg ctggtgaaac aggaactgga aattaaccag cagttaagtc agcgtctgat
     8881 taccgcgact gaaaacggta atcagttgat gcagcaaaac attaaagtca aaaactggct
     8941 ggagcgggcg ctgcaatcgg aacgcaatat taaagagcag attgccgtcc tgaagggcag
     9001 cctgctgttg tctcgtatcc tttaccagca acaacaaacg ctgccctcgg cggatgaact
     9061 ggaaaacatg accaaccgca tcgcggattt gcgtctcgaa cagtttgaag ttaaccagca
     9121 gcgtgatgca ctcttccaga gcgatgcgtt cgtcaacaaa ctggaagaag gtcacaccaa
     9181 cgaagtcaac agcgaagttc acgatgcgtt attgcaagtg gttgatatgc gtcgcgaatt
     9241 gctggatcaa ctcaacaaac agttgggtaa ccagctgatg atggccatta acctgcaaat
     9301 caaccagcag cagttaatga gcgtatcgaa aaacctgaaa tccatcctga ctcagcaaat
     9361 cttttgggtg aacagtaacc gtccaatgga ctgggactgg atcaaagcgt tcccgcaaag
     9421 cctgaaagat gaatttaagt cgatgaaaat cacggtgaac tgggaaaaag cctggcctgc
     9481 cgtttttatc gctttcctcg ccggtttgcc gctgctgttg attgccgggc tgatccactg
     9541 gcgtctgggc tggctgaaag cgtatcaaca aaaactggct tccgctgtgg gttccctgcg
     9601 taacgatagc cagctcaaca caccaaaagc gatccttatc gacctgatcc gcgcgctgcc
     9661 ggtgtgcctg attattctcg cggttggcct gattctgttg accatgcagc tcaacatcag
     9721 cgaactgcta tggtcgttca gcaaaaaact ggcgattttc tggctggtgt ttggcctgtg
     9781 ctggaaggta ctggagaaga acggcgttgc cgtgcgtcac ttcggcatgc cggaacagca
     9841 gaccagccac tggcgtcggc aaattgtccg catcagtctc gcattgctgc ctatccattt
     9901 ctggtctgtg gtggcagaac tttccccgct gcatctgatg gatgatgtgc tggggcaagc
     9961 gatgattttc ttcaacctgc tgctgattgc cttcctggta tggccaatgt gccgcgaaag
    10021 ctggcgtgat aaagagtcgc acaccatgcg actggtcacc attaccgtgc tgtcgattat
    10081 cccgattgca ttgatggtgc tgactgccac gggttatttc tacaccacgc tgcgcctctc
    10141 cgggcgttgg attgaaaccg tttatctggt gatcatctgg aacttgctct accagacggt
    10201 attgcgcggc ttaagcgtag cggcgcggcg tatcgcctgg cgtcgtgcgc tggcgcgtcg
    10261 gcagaatctg gtgaaagagg gcgcagaagg tgccgaaccg ccggaagaac ccaccattgc
    10321 actggaacag gttaaccagc agacgctgcg tattaccatg ttgctgatgt ttgcgctgtt
    10381 cggtgtcatg ttctgggcaa tttggtccga tttgatcacc gtgttcagct atctcgacag
    10441 cattacgctc tggcattaca acggtactga agctggcgct gcggtggtga aaaacgtcac
    10501 catgggcagt ctgttgtttg cgattatcgc ctcaatggtg gcctgggcgt tgattcgcaa
    10561 cctgcctggt ttgctggaag tgctggtgct ctcgcgactg aatatgcgcc agggcgcgtc
    10621 gtatgccatt actaccatcc ttaactacat cattattgcc gttggtgcga tgacggtgtt
    10681 cggatcgctg ggcgtctctt gggataaact ccagtggctg gcggcagcat tatccgtagg
    10741 tcttggtttt ggtttacaag aaattttcgg taacttcgtc tccggtttga tcattctgtt
    10801 cgaacgtccg gtgcgtattg gcgatacggt aaccattggt agcttctcgg ggacggtaag
    10861 taagatccgt attcgtgcga caacgattac cgatttcgat cgcaaagaag tgatcatccc
    10921 gaacaaagcg tttgttaccg agcgtctgat caactggtcg ttgactgaca ctactacgcg
    10981 tctggtgatc cgtctcggcg tggcctatgg ctccgatctg gaaaaagtgc gtaaagtgtt
    11041 actgaaggcg gcgactgagc acccaagggt gatgcacgaa ccaatgccgg aagtcttctt
    11101 tacggcgttt ggtgccagca cgttggatca tgagctgcgt ctgtatgtgc gtgaactgcg
    11161 tgaccgtagt cgtactgtcg atgagctgaa ccgtactatc gatcagctgt gccgtgaaaa
    11221 cgacatcaac attgccttta accagcttga agtgcatctg cacaacgaga agggcgatga
    11281 ggtgacggaa gtaaaacgcg actacaaagg cgatgacccg acgccagcgg tagggtaata
    11341 accaaagggg gcgacattta gttgccccga gattactgac aaagtgcgcg ttgttcatgc
    11401 cggatgcggc gtgaccgcct tatccggcct acgaaaccgc aagaattcaa tgtattgcag
    11461 gagcggtgta ggcctgataa gcgtagcgca tcaggcagtt ttgcgtttgc ccacaatctt
    11521 aggggacatt tagcggcccc atttatttct cacttttccg cctcatcatc gcgcgttaat
    11581 ttcttttcat aatcgcgttt tacaatatcc agcgcgcgca gcacggtgcg ggctgggatc
    11641 tgattttctt ccagcagcac aatcaaatcg acagccagtt tgacatcgtc aggggcattt
    11701 tccagtgaca tactctctcc attgctagcg ggttaagcgc gctagcctgt tttcgatttt
    11761 ttccagcgca tggcggcagc gtgccaggcg cgcttcatag gcttccactt cacgatgcag
    11821 cgtttgctgt tccacgagat cggtcacccg cgccaggcgg gctctgcgtt cggcaaccat
    11881 ctcacgtagc cgccgctcaa aatcctgatg ctgaatacgt ttacgctgcc agcgggcaat
    11941 tttcggtggc gcactgtccc actcgcgcaa tgaccaggcg gaggcttcac gcgcgatggc
    12001 ttccagttgt gccgccagat gttccgccag ccaggccact tgcggcagct gttgctgctc
    12061 aactgcatga cgaagcgcag ccagattatc gcccgcctca tcgagacaag cctgcagtgt
    12121 tgtcgcacgg gtttgaaaaa ggtgtctgtc aaaacgggca cttagcgtgg caaattgcgc
    12181 taccggggca caacgctgac gcagcgtagc gagctgtcct tccagttttt ccagcagcag
    12241 ggcggttttc acgataagac ctcaatgaaa atgataattg ttatgctaaa gtagccactc
    12301 tgtaagctga caacactcaa tatgcaacga atcattttaa tcatcattgg ctggctggcg
    12361 gtagtgctgg gtacgctggg cgtggtatta ccggtattac cgacgacgcc gtttatcctg
    12421 ctggcggcct ggtgctttgc ccgttcttcc ccgcgctttc acgcctggtt gctgtaccgc
    12481 tgatggtttg gcagctatct acgtttctgg cagaaacatc atgcgatgcc gcgcggcgtc
    12541 aaaccgcggg cgattttgct tattttgctc acgtttgcca tttctctgtg gttcgtccag
    12601 atgccatggg tgcgcatcat gttgctggta attctcgcct gtttgctttt ctatatgtgg
    12661 cgaattccgg tgattgatga aaagcaagaa aagcactgaa gcacaacaat cgcagttgca
    12721 attattgcgt acagccagta cattctggcg ttttcgagca caggcgcagg cggtcaaagg
    12781 ttaaacaact gttacttttg atacgtttaa aacgcgccgt gagtaccacc gtaacaagca
    12841 ggcatacact tatgaccgcg actgcacagc agcttgagta tctcaaaaat agcatcaaaa
    12901 gcattcagga ctacccaaaa cccggcattc ttttccgcga tgtcaccagc ttactggaag
    12961 acccgaaagc ttacgctctc agcatcgact tgctggttga gcgttacaaa aatgcgggca
    13021 ttaccaaagt tgtcggcacc gaagcgcgtg gcttcttgtt tggcgctccg gtagctctgg
    13081 gtctgggcgt tggctttgta ccggtccgta aaccgggcaa actgccgcgt gaaaccatca
    13141 gtgaaactta cgacctggaa tacggcaccg atcagctgga gatccacgtt gatgccatca
    13201 aaccgggcga caaagttctg gtggtggacg atctgctggc aaccggcggc actatcgaag
    13261 cgaccgttaa actgatccgt cgtctgggtg gtgaagtggc tgacgctgcg ttcattatca
    13321 acctgttcga tctcggcggc gaacagcgtc tcgaaaaaca gggcattacc agctacagcc
    13381 ttgtcccgtt cccgggccat taattatcgc cagtcttgtg ctgcccacgc tacggacagc
    13441 acaagatgtg cattcagcct cgccgttctg acggggctgt gttagcatta ccccttcgtg
    13501 aatccacctt ccagcgtttc agagcctgcc aatgagttat caggtcttag cccgaaaatg
    13561 gcgcccacaa acctttgctg acgtcgtcgg ccaggaacat gtgctgaccg cactggcgaa
    13621 cggcttgtcg ttagggcgta ttcatcatgc ttatcttttt tccggtaccc gtggcgtcgg
    13681 aaaaacctct atcgcccgac tgctggcgaa ggggctaaac tgcgaaaccg gcattaccgc
    13741 gacgccgtgc ggcgtgtgcg ataactgtcg tgaaatcgag caggggcgct ttgtcgatct
    13801 gattgaaatc gacgccgcct cgcgcaccaa agttgaagat acccgcgacc tgctggataa
    13861 cgtccagtac gctccggcgc gtggtcgttt caaagtttat ctgatcgacg aagtgcatat
    13921 gctgtcgcgc cacagcttta acgcactgtt aaaaaccctt gaagagccgc cggagcacgt
    13981 taagtttctg ctggcgacga ccgatccaca gaaattgccg gtgacgattt tgtcgcgctg
    14041 tttgcaattt catctcaagg cgctggatgt cgagcaaatt cgccatcaac ttgagcacat
    14101 cctcaacgaa gaacatatcg ctcacgagcc gcgggcgttg caattgctgg cgcgcgccgc
    14161 tgaaggcagc ctgcgagatg ccttaagtct gaccgaccag gcgattgcca gcggtgacgg
    14221 ccaggtttca acccaggcag tcagtgcgat gctgggtacg cttgatgacg atcaggcgct
    14281 gtcgctggtt gaagcgatgg tcgaggccaa cggcgagcgc gtaatggcgc tgattaatga
    14341 agccgctgcc cgtggtatcg agtgggaagc gttgctggtg gaaatgctcg gcctgttgca
    14401 tcgtattgcg atggtacaac tttcgcctgc tgcacttggc aacgacatgg ccgccattga
    14461 gctgcggatg cgtgaactgg cgcgcaccat accgccgacg gatattcagc tttactatca
    14521 gacgctgttg attggtcgca aagaattacc gtatgcgccg gaccgccgca tgggcgttga
    14581 gatgacgctg ctgcgcgcgc tggcgttcca tccacgtatg cctctgcctg agccagaagt
    14641 gctgcgccag tcctttgcac ccgtcgcccc aacggcagta atgacgccaa cccaggtgcc
    14701 gccgcaaccg caatcagcgc cgcagcaggc accgactgta ccgctcccgg aaaccaccag
    14761 ccaggtgctg gcggcgcgcc agcagttgca gcgcgtgcag ggagcaacca aagcaaaaaa
    14821 gagtgaaccg gcagccgcta cccgcgcgcg gccggtgaat aacgctgcgc tggaaagact
    14881 ggcttcggtc accgatcgcg ttcaggcgcg tccggtgcca tcggcgctgg aaaaagcgcc
    14941 agccaaaaaa gaagcgtatc gctggaaggc gaccactccg gtgatgcagc aaaaagaagt
    15001 ggtcgccacg ccgaaggcgc tgaaaaaagc gctggaacat gaaaaaacgc cggaactggc
    15061 ggcgaagcta gcggcagaag ccattgagcg cgacccgtgg gcggcacagg tgagtcaact
    15121 ttcgctacca aaactggtcg aacaggtggc cttaaatgcc tggaaagagg agagcgacaa
    15181 cgcagtatgt ctgcatttgc gctcctctca gcggcatttg aacaaccgcg gtgcacagca
    15241 aaaactggct gaagcgttga gcacgttaaa aggttcaacg gttgaactga ctatcgttga
    15301 agatgataat cccgcggtgc gtacgccgct ggaatggcgt caggcgatat acgaagaaaa
    15361 acttgcgcag gcgcgcgagt ccattattgc ggataataat attcagaccc tgcgtcggtt
    15421 cttcgatgcg gagctggatg aagaaagtat ccgccccatt tgatcgtaag cacagcttac
    15481 gttcgtcatc cttaacgtga ttgagagaga aacctatgtt tggtaaaggc ggtctgggta
    15541 acctgatgaa gcaagcccag cagatgcaag aaaaaatgca gaaaatgcag gaagagatcg
    15601 cgcagctgga agtcaccggc gaatctggcg caggtctggt aaaagtgacc atcaacggtg
    15661 cacacaactg ccgtcgcgta gagatcgacc cgagcctgct ggaagacgac aaagagatgc
    15721 tggaagacct ggtggctgca gcattcaacg acgcagcacg tcgtattgaa gaaacgcaga
    15781 aagaaaaaat ggcctctgta tcctccggaa tgcagctgcc gcctggcttt aagatgccgt
    15841 tctgatgcaa accagcccgc tgttaacaca gcttatggaa gcactgcgct gtctgccggg
    15901 cgttggcccg aagtcggcgc agcgtatggc gttcacgctg cttcagcgcg atcgtagcgg
    15961 cgggatgcgt ctggcgcagg cgctcacccg ggcgatgtcg gaaatcggcc actgcgccga
    16021 ttgccgcact ttcaccgaac aggaagtctg taacatctgt tcgaatccgc gtcgtcagga
    16081 aaacggtcaa atctgtgtgg tggagagtcc ggcggacatc tacgccattg agcagacggg
    16141 gcagttttct ggtcgttatt ttgtgttgat ggggcatctg tcaccgctgg acggcatcgg
    16201 tccggatgat atcgggcttg accgtctgga acagcgtctg gcagaggaaa aaatcactga
    16261 agtgatcctc gccaccaatc ccacggttga aggtgaagct accgctaact acattgccga
    16321 gctttgcgcg caatatgacg tggaagccag ccgaatcgct catggcgtac cggttggcgg
    16381 cgaactggaa atggtcgatg gcaccacgct gtcacactcc cttgccgggc gtcataagat
    16441 tcgtttttaa gcaaacgaga gcaggatcac ctgctctcgc ttgaaattat tctcccttgt
    16501 ccccatctct ccctcatcct gtttttaacc ttaaaatggc attattgagg tagacctaca
    16561 tgaaaggaca agaaactcgt ggttttcagt cagaagtgaa acagcttctg cacctgatga
    16621 tccattctct ctattccaat aaagaaatct tcctgcgtga gcttatctct aacgcctccg
    16681 atgcggcgga caagctgcgt ttccgtgcgc tatctaaccc ggacctgtac gaaggtgatg
    16741 gcgaactgtg cgttcgtgtc tctttcgata aagacaagcg cacgctgacc atctccgata
    16801 acggcgtggg gatgacccgc gacgaagtga ttgaccatct ggggactatc gctaaatccg
    16861 gtaccaaatc attcctcgaa tccctgggtt ctgaccaggc gaaagacagc cagctgatcg
    16921 gtcagtttgg tgttggtttc tactctgcgt ttatcgtggc cgacaaagtg actgtgcgta
    16981 ctcgcgcggc aggcgaaaaa ccagaaaacg gcgtcttctg ggaatcggct ggcgaaggtg
    17041 aatataccgt tgccgacatc accaaagaag atcgtggtac tgaaatcacc ctgcatctgc
    17101 gtgaaggcga agacgagttc ctcgatgact ggcgcgtgcg ttccatcatc agcaaatact
    17161 ccgaccatat cgcgctgccg gtagagatcg aaaaacgcga agagaaagac ggcgaaaccg
    17221 ttatctcctg ggagaaaatc aacaaagcgc aggcgctgtg gactcgtaac aagtcggaaa
    17281 tcaccgatga agagtacaaa gagttctaca aacacatcgc ccacgacttt aatgatccgc
    17341 tgacctggag ccacaaccgc gttgaaggta agcaggagta caccagcctg ctgtacatcc
    17401 cgtcccaggc tccgtgggat atgtggaacc gtgatcataa acacggcctg aaactgtacg
    17461 tccagcgtgt gttcatcatg gacgacgcag aacagttcat gccgaactat ctgcgcttcg
    17521 tgcgtggtct gattgactcc agcgatctgc cgctgaacgt ttcccgtgaa atcctccagg
    17581 acagcacggt aacgcgtaac ctgcgcaatg cgctgaccaa gcgtgtgctg caaatgctgg
    17641 aaaaactggc gaaagacgac gcggaaaaat accagacctt ctggcaacag tttggcctgg
    17701 tactgaaaga aggtccggcg gaagatttcg ctaaccagga agcgatcgcc aaactgctgc
    17761 gttttgcttc tacccatacc gattcttctg cgcagaccgt atctctggaa gactacgttt
    17821 cccgcatgaa agaagggcag gagaaaatct actacatcac cgcagacagc tatgcggcag
    17881 cgaagagcag cccgcacctg gaactgctgc gtaagaaagg catcgaagtt ctgctgcttt
    17941 ccgaccgcat cgatgagtgg atgatgaact atctgactga gttcgacggt aaaccgttcc
    18001 agtcggtgtc taaagttgac gagtcgctgg aaaaactggc tgacgaagtt gatgagagcg
    18061 cgaaagaagc ggagaaagca ctgactccgt tcatcgaccg tgtgaaagcc ttgctcggcg
    18121 agcgcgtgaa agatgtccgt ctgactcacc gtctgaccga tacgccagcg atcgtttcga
    18181 ccgacgcgga cgaaatgagc actcagatgg cgaaactgtt cgctgcggcg ggccagaaag
    18241 tgccagaagt gaaatacatc ttcgaactga acccggatca cgtactggtg aaacgtgcgg
    18301 cagatactga agatgaagcg aagttcagcg agtgggtaga actgctgctg gatcaggcgc
    18361 tgctggcaga acgcggcacg ctggaagatc cgaacctgtt tattcgtcgt atgaaccagc
    18421 tgctggtttc ctgatgtcat gccggatgac ctttgtgtca tccggcattt ttcttttcat
    18481 catctgcact ttccgcaaat tatctcgcca ttaaccgttt cagcctcagg tgcctttctt
    18541 gaggcaatcg cctgttggtg gtatcgttta tcgctttttc aaaaaattcg acacatttta
    18601 aggggatttt cgcaatgcgt atcattctgc ttggcgctcc gggcgcgggg aaagggactc
    18661 aggctcagtt catcatggag aaatatggta ttccgcaaat ctccactggc gatatgctgc
    18721 gtgctgcggt caaatctggc tccgagctgg gtaaacaagc aaaagacatt atggatgctg
    18781 gcaaactggt caccgacgaa ctggtgatcg cgctggttaa agagcgcatt gctcaggaag
    18841 actgccgtaa tggtttcctg ttggacggct tcccgcgtac cattccgcag gcagacgcga
    18901 tgaaagaagc gggcatcaat gttgattacg ttctggaatt cgacgtaccg gacgaactga
    18961 ttgttgatcg tatcgtaggc cgccgcgttc atgcgccgtc tggtcgtgtt tatcacgtta
    19021 aattcaatcc gccgaaagta gaaggcaaag acgacgttac cggtgaagaa ctgactaccc
    19081 gtaaagacga tcaggaagaa accgtacgta aacgtctggt tgaataccat cagatgactg
    19141 caccgctgat cggctactac tccaaagaag cggaagcggg taacaccaaa tacgcgaaag
    19201 ttgacggcac caagccggtt gctgaagttc gcgctgatct ggaaaaaatc ctcggctaat
    19261 caagccgcag cagatctgct ttcgggcagg tctgctcatc cacctcaggc aatacctctc
    19321 acagcaatta gttcttcttc ctcacttttc cgctacaatt atcaacaagt tgaatcgata
    19381 agaggcggta atgcgtcaga ctaaaaccgg tatcctgctg gcaaacctgg gtacgcccga
    19441 tgcccccaca cctgaagcgg taaaacgcta tctgaaacaa tttttaagcg acagacgcgt
    19501 ggttgatacc tcacggttgt tatggtggcc attgctgcgc ggcgttattt tgccgctgcg
    19561 ctcgccgcgt gtggcgaagc tgtatgcctc tgtctggatg gaaggtggct cgccgctgat
    19621 ggtttacagc cgccagcaac agcaggcgct ggcacaacgt ttaccggaga cgcccgtagc
    19681 gctgggaatg agctacggct cgccatcact ggaaagcgcc gtcgatgaac tcctggcaga
    19741 gcatgtagat catattgtgg tgctgccgct ttatccgcaa ttctcctgtt ctacggtcgg
    19801 tgcggtatgg gatgaactgg cacgcattct ggcgcgcaaa cgtagcattc cggggatatc
    19861 gtttattcgt gattacgccg ataaccacga ttacattaat gcactggcga acagcgtacg
    19921 cgcttctttt gccaaacatg gcgaaccgga tctgctgctg ctctcttatc atggcattcc
    19981 ccagcgttat gcagatgaag gcgatgatta cccgcaacgt tgccgcacaa cgactcgcga
    20041 actggcttcc gcactgggga tggcaccgga aaaagtgatg atgacctttc agtcgcgctt
    20101 tggccgggaa ccctggctga tgccttatac cgacgaaacg ctgaaaatgc tcggagaaaa
    20161 aggcgtaggt tatatacagg tgatgtgccc gggctttgct gcggattgtc tggagacgct
    20221 ggaagagatt gccgagcaaa accgtgaggt cttcctcggt gccggtggga aaaaatatga
    20281 atatattcca gcgcttaatg ccacgccaga acatatcgaa atgatggcta atcttgttgc
    20341 cgcgtatcgc taaagctgag cggtaaagaa ctgagcgccg tcgcgaagag cctcgtcggc
    20401 ggttttcatc attcgtgaat aatgcaaaaa gacatgcagc gtacctgggt agagtttgaa
    20461 ctcacagggc tgctgatgcg ccgctaacgt ctggtaaagc agacggctgt catccagcag
    20521 cggatcgaac tccgccccgg caataaaaca gggcggaact tcgcgagtga gatcattatt
    20581 aaacagacag taatacggtg actcgcggtc cgcgtcgttg cttaaatacg cctcttcata
    20641 catctgcaaa tcctgttgcg ttaagccatc ccagacaccg cccaacagac gacgagtcac
    20701 ggaatcccgt aatccgtaaa gcccatacca cagcaaaaca cccgcaattt taccgcaatc
    20761 gatctgttta tcacgcaacc acaacgcact ggcgagcgcc agcatggcac ctgcggaatc
    20821 accggcaaag ccaatgcggg acatattgat ttgataatcc tccgcctgct ggtggaaata
    20881 acaacaagca gccacaattt cctctatcgc ttgcggaaaa cgcgcttcag gtgaaagggg
    20941 gtaatcaata ccaatcaccg tacattggct gtagcttgcc agcaggcgca tgatgcgatc
    21001 gtgggtatcg agattgccga gaataaaacc gcctccatgc aaataaaata gcgtcgccgg
    21061 gctatctggc tgcggacaaa agagacgtgt ttccacctgc ccatattttg ttggaaccat
    21121 gtaagctctg gttgccattt ctggagcgcc cgcattccag aatcggcgct caagcgtgta
    21181 atactgtcgt tgctcagcaa tcgttcccgt tgcgggccag gacggtaaat ccggctgaag
    21241 agtattcaca acggtcttca tttcagcaga aataaggtcc agaacaggta gtttgttttc
    21301 cggcttcata caaaaactcc tttcaaatta cgtcattgta aggaaccact gccatgaaaa
    21361 tgcgatcccg cctgctgata ttgaaactgg ctgcgtctcg cgcgctcccg tcagattgtg
    21421 ttaacattcg ccgctcagtt aaccacccgt aaaaacaacc atgaaatttc ccggtaaacg
    21481 taaatccaaa cattacttcc ctgtaaatgc acgcgatccg ctgcttcagc aattccagcc
    21541 agaaaacgaa accagcgccg cctgggtcgt aggtattgac cagacgctgg tcgatattga
    21601 agcgaaagtg gatgatgaat tcattgagcg ttatggatta agcgccgggc attcactggt
    21661 gattgaggat gacgtagccg aagcgcttta tcaggagcta aaacagaaaa acctgattac
    21721 ccatcagttt gcgggtggca ccattggtaa caccatgcac aactactcgg tgctcgcgga
    21781 cgaccgttcg gtgctgctgg gcgtcatgtg cagcaatatt gaaattggca gttatgccta
    21841 tcgttacctg tgtaacactt ccagccgtac cgatcttaac tatctacaag gcgtggatgg
    21901 cccgattggt cgttgcttta cgctgattgg cgagtccggg gaacgtacct ttgctatcag
    21961 tccaggccac atgaaccagc tgcgggctga aagcattccg gaagatgtga ttgccggagc
    22021 ctcggcactg gttctcacct cttatctggt gcgttgcaaa ccgggtgaac ccatgccgga
    22081 agcaaccatg aaagccattg agtacgcgaa gaaatataac gtaccggtgg tgctgacgct
    22141 gggcaccaag tttgtcattg ccgagaatcc gcagtggtgg cagcaattcc tcaaagatca
    22201 cgtctctatc cttgcgatga acgaagatga agccgaagcg ttgaccggag aaagcgatcc
    22261 gttgttggca tctgacaagg cgctggactg ggtagatctg gtgctgtgca ccgccgggcc
    22321 aatcggcttg tatatggcgg gctttaccga agacgaagcg aaacgtaaaa cccagcatcc
    22381 gctgctgccg ggcgctatag cggaattcaa ccagtatgag tttagccgcg ccatgcgcca
    22441 caaggattgc cagaatccgc tgcgtgtata ttcgcacatt gcgccgtaca tgggagggcc
    22501 ggaaaaaatc atgaacacta atggagcggg ggatggcgca ttggcagcgt tgctgcatga
    22561 cattaccgcc aacagctacc atcgtagcaa cgtaccaaac tccagcaaac ataaattcac
    22621 ctggttaact tattcatcgt tagcgcaggt gtgtaaatat gctaaccgtg tgagctatca
    22681 ggtactgaac cagcattcac ctcgtttaac gcgcggcttg ccggagcgtg aagacagcct
    22741 ggaagagtct tactgggatc gttaagttat cgtcggttcg taggccagat aaggcgttca
    22801 cgccgcatct ggcatttggc tctcgatgcc tgatgcgacg ctggcgcgtc ttatcatgcc
    22861 tacatatttt tcatatttta catccggcaa ccaccgttta ccccgtcacc acctcacccg
    22921 ccggtggcgt ttccagcagt tccagcatgg tacgggcgat ttcacgctcg cccatcacta
    22981 cctgattcgc accacgttcg gtgatatacg ccacttcatc gtcataatgg gcgcgggcaa
    23041 taatctcaat atccggattt ttcgcgcggg cagatgccac aatctcaccc gcttcataac
    23101 cgttgggaat cgtcaggatc agccattttg cacattccag atgcgccagt tgcataattt
    23161 cttcgttcgc cgcattgccc aatactgcgc ggaccccgcg ctctcgcagc tcatcaacac
    23221 gggttcgtga cgtctcaatc accaccagcg gaatatcaga ggcgagcaat ttctccccca
    23281 gcaggctgcc tacacgaccg taacccacca gtagcgcatg gttgcaaata tccactggga
    23341 tctgcttctc ttcttcgatt gcctcttcca gcgtctgctc ttccagcgtt ttggtcttcg
    23401 ccagatattt ctccagtagt gcgaacagta ccgggttgag cataatcgac aggatcgccc
    23461 ctgccagtac caggttttgt ccggcctgcg gcagtaaatt caatgccatt cccagtcccg
    23521 ccaggataaa cgcgaactca ccaatctgcg ccaggctggc ggcgatggtt aatgccgtac
    23581 gttgggagtg accaaacagt cgcaccagga aaaatgcggc taacgactta ccaaacagaa
    23641 taatcgccag cgtcgccagc actgccagcg gttgctgaat cagaattaac ggatcaaaca
    23701 acatcccgac ggagacaaaa aacagcaccg caaacgcgtc gcgcaatggc agcgtatcgt
    23761 gggcggcacg gtgactcagt tcagactcgt tcagtaccat cccggcaaag aacgcaccga
    23821 gtgcaaagga gacatcaaac agctctaccg caccaaaggc aatccctaac gccagcgcca
    23881 gcaccgacag ggtaaacagc tcgcgagaac cggttgccgc gctgcgtgcc ataatccacg
    23941 gcaccagacg gcgacctacc agcatcataa tggcgataaa tgcgatcact ttgccgatgg
    24001 tgatccccat atcgactgca agagtggcaa agcccacatc gccctgttcc atcattcctg
    24061 ccactgcggg cagcaacacc agcgtcagaa ccattaccag gtcttccaca atcaaccaac
    24121 cgatggcgat ttgcccacgc tgactgtcaa ttaattgccg ttcttcaagt gcgcgcagta
    24181 acaccacggt actggcggtg gaaagacata aaccgaacac gataccgggc attaacgacc
    24241 agcccagcac ggcagagagc gccataccca gcagcgtcgc cacggctatc tgggcgatcg
    24301 caccgggaat ggcgatggcc tttaccgcca tcaaatcctt cagcgaaaag tgcaaaccga
    24361 cgccaaacat caacagaatg acgcccagtt cagccagttc cggcgcaagc ttggtatcgg
    24421 caacaaagcc cggagtgaat ggtcctgcca gcacacccgc taacagatat cccaccagag
    24481 gagaaatacg tagtttattg gccagcatgc cgaggataaa ggcgagcaca aggccgccaa
    24541 caatggtggt gataagcggg gtggcgtgat gcattccgtc tccttttcct ggtggttatt
    24601 gtccattttt ggccgggaaa accaaaatta caggtaatag tttatgacaa tttcattgat
    24661 gatgttcatg aataattatt gaattttgca gaaaaatgga attagctgca aaaaaagcac
    24721 ggttcggaaa acagaaggcg gtttaacaga ggaaaggctt atggcgactg taaaacgatg
    24781 cagccaaagt ttgcctttgg ctgcaatgaa atcagtcttt atgccggtta tcaggcagga
    24841 atatggtcaa catccccaat agtggcagga aagcacagat tttatagact aactcgatgc
    24901 tggtgtgatc ggcgataagc cccagaactg ccgctcccag acctcccatg ccaaaagcaa
    24961 aaccgaaaaa gagtccagaa accataccga tacgtcccgg aagtagctcc tgagcgtaga
    25021 ccagaatggc agataatgcc gaagcgagga taaatccaat aatcaccgtt aaaacccccg
    25081 tccagtgcag gctggcgtag ggtaaaatca gcgtaaacgg cgcaacgccg aggatagagc
    25141 cccaaatcac atatttccgt ccaattttat cccctacagg cccgccgatc actgtacctg
    25201 ccgcaacggc aaacaggaag gcaaacagat gaagctgggc attctggata gataatccga
    25261 atttttgcat cagataaaag gtgtaata
//
LOCUS       DADMHC010000041        25140 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.041, whole genome shotgun sequence.
ACCESSION   DADMHC010000041 DADMHC010000000
VERSION     DADMHC010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 25140)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25140)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25140
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.041"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..402)
                     /locus_tag="JNZ57_001395"
     CDS             complement(<1..402)
                     /locus_tag="JNZ57_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HAY8827667.1"
                     /translation="MDTTLPFLILYACLSALLFFWDAKHGLLPDRFTCPLLWSGLLFY
                     QVCHPDGLADALWGTIVGYGTFAVIYWGYRILRHKEGLGYGDVKFLAALGAWHSWAFL
                     PRLVFLAASFACGAVVIGLLMRGKESLKNPLP"
     gene            781..1092
                     /gene="rpsJ"
                     /locus_tag="JNZ57_001396"
     CDS             781..1092
                     /gene="rpsJ"
                     /locus_tag="JNZ57_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014268624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HAY8827668.1"
                     /translation="MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPT
                     RKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISL
                     G"
     gene            1125..1754
                     /gene="rplC"
                     /locus_tag="JNZ57_001397"
     CDS             1125..1754
                     /gene="rplC"
                     /locus_tag="JNZ57_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000579825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HAY8827669.1"
                     /translation="MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDG
                     YRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFA
                     DVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKK
                     MAGQMGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAVKA"
     gene            1765..2370
                     /gene="rplD"
                     /locus_tag="JNZ57_001398"
     CDS             1765..2370
                     /gene="rplD"
                     /locus_tag="JNZ57_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010304939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HAY8827670.1"
                     /translation="MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTR
                     AQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYR
                     GALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLA
                     ARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA"
     gene            2367..2669
                     /gene="rplW"
                     /locus_tag="JNZ57_001399"
     CDS             2367..2669
                     /gene="rplW"
                     /locus_tag="JNZ57_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007891652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HAY8827671.1"
                     /translation="MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIK
                     AAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE"
     gene            2687..3508
                     /gene="rplB"
                     /locus_tag="JNZ57_001400"
     CDS             2687..3508
                     /gene="rplB"
                     /locus_tag="JNZ57_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HAY8827672.1"
                     /translation="MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRN
                     NNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERR
                     YILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGT
                     YVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRP
                     TVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK"
     gene            3525..3803
                     /gene="rpsS"
                     /locus_tag="JNZ57_001401"
     CDS             3525..3803
                     /gene="rpsS"
                     /locus_tag="JNZ57_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HAY8827673.1"
                     /translation="MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNM
                     IGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPTRTYRGHAADKKAKKK"
     gene            3818..4150
                     /gene="rplV"
                     /locus_tag="JNZ57_001402"
     CDS             3818..4150
                     /gene="rplV"
                     /locus_tag="JNZ57_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000447526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HAY8827674.1"
                     /translation="METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAA
                     VLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSH
                     ITVVVSDR"
     gene            4168..4869
                     /gene="rpsC"
                     /locus_tag="JNZ57_001403"
     CDS             4168..4869
                     /gene="rpsC"
                     /locus_tag="JNZ57_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000529946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HAY8827675.1"
                     /translation="MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLT
                     KELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN
                     IAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGA
                     EIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPE
                     KPAAQPKKQQRKGRK"
     gene            4882..5292
                     /gene="rplP"
                     /locus_tag="JNZ57_001404"
     CDS             4882..5292
                     /gene="rplP"
                     /locus_tag="JNZ57_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HAY8827676.1"
                     /translation="MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTAR
                     QIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVL
                     YEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM"
     gene            5292..5483
                     /gene="rpmC"
                     /locus_tag="JNZ57_001405"
     CDS             5292..5483
                     /gene="rpmC"
                     /locus_tag="JNZ57_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000644743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HAY8827677.1"
                     /translation="MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLK
                     QVRRDVARVKTLLNEKAGA"
     gene            5483..5737
                     /gene="rpsQ"
                     /locus_tag="JNZ57_001406"
     CDS             5483..5737
                     /gene="rpsQ"
                     /locus_tag="JNZ57_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006817275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HAY8827678.1"
                     /translation="MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKL
                     HVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL"
     gene            5902..6273
                     /gene="rplN"
                     /locus_tag="JNZ57_001407"
     CDS             5902..6273
                     /gene="rplN"
                     /locus_tag="JNZ57_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013975775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HAY8827679.1"
                     /translation="MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIK
                     EAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGP
                     VTRELRSEKFMKIISLAPEVL"
     gene            6284..6598
                     /gene="rplX"
                     /locus_tag="JNZ57_001408"
     CDS             6284..6598
                     /gene="rplX"
                     /locus_tag="JNZ57_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000729185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HAY8827680.1"
                     /translation="MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKK
                     HQKPVPALNQPGGIVEKEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSET
                     IK"
     gene            6613..7152
                     /gene="rplE"
                     /locus_tag="JNZ57_001409"
     CDS             6613..7152
                     /gene="rplE"
                     /locus_tag="JNZ57_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HAY8827681.1"
                     /translation="MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAI
                     ADKKLLDNAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFER
                     LITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTA
                     KSDEEGRALLAAFDFPFRK"
     gene            7167..7472
                     /gene="rpsN"
                     /locus_tag="JNZ57_001410"
     CDS             7167..7472
                     /gene="rpsN"
                     /locus_tag="JNZ57_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HAY8827682.1"
                     /translation="MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNA
                     VLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW"
     gene            7506..7898
                     /gene="rpsH"
                     /locus_tag="JNZ57_001411"
     CDS             7506..7898
                     /gene="rpsH"
                     /locus_tag="JNZ57_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HAY8827683.1"
                     /translation="MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEG
                     FIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIA
                     VVSTSKGVMTDRAARQAGLGGEIICYVA"
     gene            7911..8444
                     /gene="rplF"
                     /locus_tag="JNZ57_001412"
     CDS             7911..8444
                     /gene="rplF"
                     /locus_tag="JNZ57_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HAY8827684.1"
                     /translation="MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVK
                     HADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNV
                     INLSLGFSHPVDHQLPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGK
                     GVRYADEVVRTKEAKKK"
     gene            8454..8807
                     /gene="rplR"
                     /locus_tag="JNZ57_001413"
     CDS             8454..8807
                     /gene="rplR"
                     /locus_tag="JNZ57_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HAY8827685.1"
                     /translation="MDKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNG
                     SEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGR
                     VQALADAAREAGLQF"
     gene            8822..9325
                     /gene="rpsE"
                     /locus_tag="JNZ57_001414"
     CDS             8822..9325
                     /gene="rpsE"
                     /locus_tag="JNZ57_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004106339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HAY8827686.1"
                     /translation="MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNG
                     RVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEG
                     TGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKS
                     VEEILGK"
     gene            9329..9508
                     /gene="rpmD"
                     /locus_tag="JNZ57_001415"
     CDS             9329..9508
                     /gene="rpmD"
                     /locus_tag="JNZ57_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012147215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HAY8827687.1"
                     /translation="MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAI
                     RGMINAVSFMVKVEE"
     gene            9512..9946
                     /gene="rplO"
                     /locus_tag="JNZ57_001416"
     CDS             9512..9946
                     /gene="rplO"
                     /locus_tag="JNZ57_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011095501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HAY8827688.1"
                     /translation="MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGG
                     GVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEVRLSDLAKVEGGVVDLNTLKAANIIG
                     IQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIEE"
     gene            9954..11285
                     /gene="secY"
                     /locus_tag="JNZ57_001417"
     CDS             9954..11285
                     /gene="secY"
                     /locus_tag="JNZ57_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004868351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HAY8827689.1"
                     /translation="MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGI
                     DAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTL
                     AEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTA
                     VVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFL
                     VLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIP
                     AIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTA
                     LVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMR
                     DAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKANLKGYGR"
     gene            11317..11433
                     /gene="rpmJ"
                     /locus_tag="JNZ57_001418"
     CDS             11317..11433
                     /gene="rpmJ"
                     /locus_tag="JNZ57_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020322760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HAY8827690.1"
                     /translation="MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG"
     gene            11580..11936
                     /gene="rpsM"
                     /locus_tag="JNZ57_001419"
     CDS             11580..11936
                     /gene="rpsM"
                     /locus_tag="JNZ57_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018356918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HAY8827691.1"
                     /translation="MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVK
                     ISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRT
                     KTNARTRKGPRKPIKK"
     gene            11953..12342
                     /gene="rpsK"
                     /locus_tag="JNZ57_001420"
     CDS             11953..12342
                     /gene="rpsK"
                     /locus_tag="JNZ57_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HAY8827692.1"
                     /translation="MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGW
                     ATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNA
                     AGFRITNITDVTPIPHNGCRPPKKRRV"
     gene            12376..12996
                     /gene="rpsD"
                     /locus_tag="JNZ57_001421"
     CDS             12376..12996
                     /gene="rpsD"
                     /locus_tag="JNZ57_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HAY8827693.1"
                     /translation="MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGAR
                     KPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVV
                     YRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALE
                     LAEQREKPTWLEVDAGKMEGTFKRKPERSDLSADINEHLIVELYSK"
     gene            13022..14011
                     /gene="rpoA"
                     /locus_tag="JNZ57_001422"
     CDS             13022..14011
                     /gene="rpoA"
                     /locus_tag="JNZ57_001422"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HAY8827694.1"
                     /translation="MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALR
                     RILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTL
                     NKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIH
                     SEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIR
                     RAATILAEQLEAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIH
                     YIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIADE"
     gene            14052..14435
                     /gene="rplQ"
                     /locus_tag="JNZ57_001423"
     CDS             14052..14435
                     /gene="rplQ"
                     /locus_tag="JNZ57_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HAY8827695.1"
                     /translation="MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKEL
                     RRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGF
                     RAGDNAPMAYIELVDRSEKAEAAAE"
     gene            14542..14910
                     /locus_tag="JNZ57_001424"
     CDS             14542..14910
                     /locus_tag="JNZ57_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1992 domain-containing protein"
                     /protein_id="HAY8827696.1"
                     /translation="MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELR
                     AGYRLLKNAGCLPPELEQRREAIQLLDILRGIRHDDPQYQEVSRRLSLLELKLRQAGL
                     STDFLRGDYADKLLDKINDN"
     gene            14921..15346
                     /gene="zntR"
                     /locus_tag="JNZ57_001425"
     CDS             14921..15346
                     /gene="zntR"
                     /locus_tag="JNZ57_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn(2+)-responsive transcriptional regulator"
                     /protein_id="HAY8827697.1"
                     /translation="MYRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESD
                     LQRLKFIRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQS
                     MQRSLQRLNDACCGTAHSSVYCSILEALEQGASGVKSGC"
     gene            15402..15620
                     /gene="arfA"
                     /locus_tag="JNZ57_001426"
     CDS             15402..15620
                     /gene="arfA"
                     /locus_tag="JNZ57_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome alternative rescue factor ArfA"
                     /protein_id="HAY8827698.1"
                     /translation="MSRYQHTKGQIRDNAIEALLHDPLFRQRVEKNKKGKGSYMRKGK
                     HGNRGNWEASGKKVNHFFTTGLLLSGAC"
     gene            complement(15617..16027)
                     /gene="mscL"
                     /locus_tag="JNZ57_001427"
     CDS             complement(15617..16027)
                     /gene="mscL"
                     /locus_tag="JNZ57_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HAY8827699.1"
                     /translation="MSIIKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPP
                     LGLLIGGIDFKQFAVTLRDAQGDIPAVVMHYGVFIQNVFDFLIVAFAIFMAIKLINKL
                     NRKKEEPAAAPAPTKEEVLLAEIRDLLKEQNNRS"
     gene            complement(16157..17533)
                     /gene="trkA"
                     /locus_tag="JNZ57_001428"
     CDS             complement(16157..17533)
                     /gene="trkA"
                     /locus_tag="JNZ57_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004125888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HAY8827700.1"
                     /translation="MKIIILGAGQVGGTLAENLVGENNDITVVDTNGERLRTLQDKFD
                     LRVVQGHGSHPRVLREAGADDADMLVAVTSSDETNMVACQVAYSLFNTPNRIARIRSP
                     DYVRDADKLFHSDAVPIDHLIAPEQLVIDNIYRLIEYPGALQVVNFAEGKVSLAVVKA
                     YYGGPLIGNALSTMREHMPHIDTRVAAIFRHDRPIRPQGSTIVEAGDEVFFIAASQHI
                     RAVMSELQRLEKPYKRIMLVGGGNIGAGLARRLEKDYSVKLIERNQQRAAELAEKLQN
                     TIVFFGDASDQELLAEEHIDQVDLFIAVTNDDEANIMSAMLAKRMGAKKVMVLIQRRA
                     YVDLVQGSVIDIAISPQQATISALLSHVRKADIVGVSSLRRGVAEAIEAVAHGDESTS
                     RVVGRVIDEIKLPPGTIIGAVVRGNDVMIANDNLRIEQGDHVIMFLTDKKFITDVERL
                     FQPSPFFL"
     gene            complement(17555..18844)
                     /gene="rsmB"
                     /locus_tag="JNZ57_001429"
     CDS             complement(17555..18844)
                     /gene="rsmB"
                     /locus_tag="JNZ57_001429"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HAY8827701.1"
                     /translation="MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALL
                     QELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAET
                     VEGAIAIKRPQLKGLINGVLRQFQRQQEELLAKFNASDARYLHPSWLLKRLQKAYPEQ
                     WQSIVEANNQRPPMWLRVNRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVH
                     ALPGFEDGWVTVQDASAQGCMTWLAPQNSEHILDLCAAPGGKTTHILEVAPEAQVVAV
                     DIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRHH
                     PDIKWLRRDRDIPELAQLQSEILDAIWPHLKSGGTLVYATCSVLPEENSLQIKAFLQR
                     TADAELCETGAPEQPGKQNLPGAEEGDGFFYAKLIKK"
     gene            complement(18890..19837)
                     /gene="fmt"
                     /locus_tag="JNZ57_001430"
     CDS             complement(18890..19837)
                     /gene="fmt"
                     /locus_tag="JNZ57_001430"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HAY8827702.1"
                     /translation="MSESLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRG
                     KKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEM
                     PRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPIT
                     AEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDKTLVTYAEKLSKEEARIDWS
                     LSAAQLERCIRAFNPWPMSWLEIERQPVKVWKASVIDTATNAAPGTILEANKQGIQVA
                     TGDGILNLLSLQPAGKKAMSAQDLLNSRREWFVPGNRLA"
     gene            complement(19852..20361)
                     /gene="def"
                     /locus_tag="JNZ57_001431"
     CDS             complement(19852..20361)
                     /gene="def"
                     /locus_tag="JNZ57_001431"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HAY8827703.1"
                     /translation="MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG
                     IGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPKQRALVP
                     RAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE
                     KLDRLKARA"
     gene            20491..21615
                     /gene="dprA"
                     /locus_tag="JNZ57_001432"
     CDS             20491..21615
                     /gene="dprA"
                     /locus_tag="JNZ57_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HAY8827704.1"
                     /translation="MVDTDIWLRLMSISSLYGDDMVRIAHWLAKQSHIDAVVLQQTGL
                     TLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL
                     HALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN
                     GVSIAVLGNGLNTIHPRRHARLATSLLEHGGALVSEFPLDVPPLAYNFPRRNRIISGL
                     SKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP
                     EEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQP
                     VPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRTNVFV"
     gene            21587..22060
                     /locus_tag="JNZ57_001433"
     CDS             21587..22060
                     /locus_tag="JNZ57_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 domain-containing protein"
                     /protein_id="HAY8827705.1"
                     /translation="MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFDREDIYNAL
                     LWLEKLADYQEGLTEPMQLASDPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLEI
                     REMVIERVLALDTAEFDLEDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH"
     gene            22089..22631
                     /locus_tag="JNZ57_001434"
     CDS             22089..22631
                     /locus_tag="JNZ57_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827706.1"
                     /translation="MAKSALFTVRNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYV
                     RPLKSSADGHIVKVLEGQVCPACGANLVLRQGRFGMFIGCSNYPECEHTELIDKPDET
                     AITCPQCRTGHLVQRRSRYGKTFHSCDRYPECQFAINFKPIAGECPECHYPLLIEKKT
                     AQGVKHFCASKQCGKPVSAE"
     gene            22636..23208
                     /gene="tsaC"
                     /locus_tag="JNZ57_001435"
     CDS             22636..23208
                     /gene="tsaC"
                     /locus_tag="JNZ57_001435"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase type 1
                     TsaC"
                     /protein_id="HAY8827707.1"
                     /translation="MNNNLQGDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVM
                     RLLELKQRPVDKGLILIAANYEQLKPYIDDTMLTDAQRETIFSRWPGPVTFVFPAPAT
                     TPRWLTGRFDSLAVRVTDHPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGA
                     AFPVVPGETGGRLNPSEIRDALTGELFRQG"
     gene            23213..24031
                     /gene="aroE"
                     /locus_tag="JNZ57_001436"
     CDS             23213..24031
                     /gene="aroE"
                     /locus_tag="JNZ57_001436"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709069.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HAY8827708.1"
                     /translation="METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFI
                     NTLNAFFSAGGKGANVTVPFKEEAFARADELTERAALAGAVNTLKRLEDGRLQGDNTD
                     GIGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAK
                     LFAHTGSIQALGMDELEGHEFDLIINATSSGISGDIPAIPSSLIHLGIYCYDMFYQKG
                     KTPFLAWCEQRGSKRNVDGLGMLVAQAAHAFLLWHGVLPDVEPVIKQLQEELSA"
     gene            24028..24285
                     /locus_tag="JNZ57_001437"
     CDS             24028..24285
                     /locus_tag="JNZ57_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1488 domain-containing protein"
                     /protein_id="HAY8827709.1"
                     /translation="MNQAIQFPDREEWDENKKCVCFPALVNGMQLTCAISGESLAYRF
                     TGDTPEQWLASFRQHRWDLEEEAENLIQEQSEDDQGWVWLP"
     gene            complement(24261..24815)
                     /locus_tag="JNZ57_001438"
     CDS             complement(24261..24815)
                     /locus_tag="JNZ57_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HAY8827710.1"
                     /translation="MSDVLRPYRDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVV
                     IRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGN
                     RVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAG
                     LLYSANNYVKWKDEYLDQGNQTQP"
BASE COUNT         6419 a         5976 c         6554 g         6191 t
ORIGIN      
        1 aggcagcggg ttttttaatg attcttttcc tctcatgagc agaccaataa ctacggctcc
       61 gcaagcgaat gaggcagcaa ggaaaaccag tcgtggtaag aaggcccatg aatgccaggc
      121 gccaagggcg gcgagaaact tcacatcacc atagcctaat ccttctttat gtcgcagtat
      181 gcgatacccc cagtaaatga cagcgaatgt gccgtaacca acaattgtcc cccataacgc
      241 atcggctaaa ccatcaggat gacaaacttg atagaacaaa agacctgacc agagtaacgg
      301 gcacgtaaat ctgtcaggta acaagccatg ctttgcatcc cagaaaaaaa gtagggctga
      361 taaacaagcg tacaaaatca gaaagggaag ggtagtgtcc ataaaacatc ctctgtaatt
      421 ggagtatcac catcgaataa ctccggatgc tcagcaacag agagagcgct gatttgttaa
      481 cctgattccg gtgaaaaacg ctatcttcac aaccttacaa atttcgtgga atgcagctcg
      541 caatctgcgc gttgcgatta atttctaccc gatgcttgcg tcaggctcag atttgcgtat
      601 aatgcgcggg cttgtcgtag ttgacagcag gttcaatctg aacctcagtt agccgaattt
      661 ggctacctaa caatgctccc aatcggggag ctacgtaaga acggttacac tctcccatca
      721 atcgtaatgg gtctgaggag taatcatttt cgtttataaa ataattggag ctctggtctc
      781 atgcagaacc aaagaatccg tatccgcctg aaagcgtttg atcatcgtct gatcgatcaa
      841 gcaaccgcgg aaatcgtcga gactgccaag cgcactggtg cgcaggtccg tggtccgatc
      901 ccgctgccga cacgcaaaga gcgcttcact gttctgatct ccccgcacgt caacaaagac
      961 gcgcgcgatc agtacgaaat ccgtactcac ttgcgtctgg ttgacatcgt tgagccaacc
     1021 gagaaaaccg ttgatgctct gatgcgtctg gatctggctg ccggtgtaga cgtgcagatc
     1081 agcctgggtt aatcaggtca ttgagcgatt gagaggttga aacaatgatt ggtttagtcg
     1141 gtaaaaaagt gggtatgacc cgtatcttca cagaagacgg cgtttctatc ccagtaaccg
     1201 taatcgaagt tgaagcaaac cgcgttactc aggttaaaga cctggctaac gatggctacc
     1261 gtgctattca ggtgaccacc ggtgctaaaa aagctaaccg tgtgaccaag cctgaagctg
     1321 gccacttcgc taaagctggc gtagaagctg gccgtggtct gtgggaattc cgcctggctg
     1381 aaggcgaaga gttcactgta ggtcagagca ttagcgttga actgtttgct gacgttaaaa
     1441 aagttgacgt aactggcacc tctaaaggta aaggtttcgc aggtaccgtt aagcgctgga
     1501 acttccgtac ccaggacgct actcacggta actccttgtc tcaccgcgtt ccgggttcta
     1561 tcggtcagaa ccagactccg ggcaaagtgt tcaaaggcaa gaaaatggca ggtcagatgg
     1621 gtaacgaacg tgtaaccgtt cagagccttg acgtagtacg cgttgacgct gagcgcaacc
     1681 tgctgctggt taaaggtgct gtcccgggtg caaccggtag cgacctgatc gttaaaccag
     1741 ctgtgaaggc gtaaggagat agcaatggaa ttagtattga aagacgcgca gagcgcgctg
     1801 actgtttccg aaactacctt cggtcgtgat ttcaacgaag cgctggttca ccaggttgtt
     1861 gttgcttatg cagctggtgc tcgtcagggt actcgtgctc agaagactcg tgctgaagta
     1921 actggttccg gtaaaaaacc gtggcgccag aaaggcaccg gccgtgcgcg ttctggttct
     1981 atcaagagcc cgatctggcg ttctggtggc gtgacctttg ctgctcgtcc gcaggaccac
     2041 agtcaaaaag ttaacaagaa gatgtaccgc ggcgcgctga aaagcatcct gtccgaactg
     2101 gtacgtcagg atcgtctgat cgttgtcgag aagttctctg tagaagcgcc gaaaactaag
     2161 ctgctggcac agaaactgaa agacatggct ctggaagatg tgctgatcat caccggtgag
     2221 ctggacgaaa acctgttcct ggctgcgcgc aacctgcaca aggttgacgt acgcgatgca
     2281 actggtatcg acccggttag cctgatcgcc ttcgacaaag tcgtaatgac tgctgatgct
     2341 gttaagcaag ttgaggagat gctggcatga ttcgtgaaga acgtctgctg aaggtgctgc
     2401 gtgcaccgca cgtttctgaa aaagcgtcta ctgcgatgga aaaatccaac accatcgtac
     2461 tcaaagttgc taaagacgcg accaaagcag aaatcaaagc tgctgtgcag aaactgtttg
     2521 aagtcgaagt cgaagtcgtt aacaccctgg tagttaaagg gaaagttaaa cgtcacggac
     2581 agcgtatcgg tcgtcgtagc gactggaaaa aagcttacgt caccctgaaa gaaggccaga
     2641 atctggactt cgttggcggc gctgagtaag tcggaggagt aatacaatgg cagttgttaa
     2701 atgtaaaccg acatctccgg gtcgtcgcca cgtagttaaa gtggttaacc ctgagctgca
     2761 caagggcaaa ccttttgctc cgttgctgga aaaaaacagc aaatccggtg gtcgtaacaa
     2821 caatggccgt atcaccactc gtcatatcgg tggtggccac aagcaggctt accgtattgt
     2881 tgacttcaaa cgcaacaaag acggtatccc ggcagttgtt gaacgtcttg agtacgatcc
     2941 gaaccgttcc gcgaacatcg cgctggttct gtacaaagac ggtgaacgcc gttacatcct
     3001 ggcccctaaa ggcctgaaag ctggcgacca gattcagtct ggcgttgatg ctgcaatcaa
     3061 accaggtaac accctgccga tgcgcaacat cccggttggt tctactgttc ataacgtaga
     3121 aatgaaacca ggtaaaggcg gtcagctggc acgttccgct ggtacttacg ttcagatcgt
     3181 tgctcgtgat ggtgcttatg tcaccctgcg tctgcgttct ggtgaaatgc gtaaagtaga
     3241 agcagactgc cgtgcaactc tgggcgaagt tggcaatgct gagcatatgc tgcgcgttct
     3301 gggtaaagca ggtgctgcac gctggcgtgg tgttcgtccg accgttcgcg gtaccgcgat
     3361 gaacccggta gaccacccac atggtggtgg tgaaggtcgt aactttggta agcacccggt
     3421 aactccgtgg ggcgttcaga ccaaaggtaa gaagacccgc agcaacaagc gtactgataa
     3481 attcatcgta cgtcgccgta gcaaataatt ttagaggata agccatgcca cgttctctca
     3541 agaaaggtcc ttttattgac ctgcacttgc tgaagaaggt agagaaagcg gtggaaagcg
     3601 gagacaagaa gcccctgcgc acttggtccc gtcgttcaac gatctttcct aacatgatcg
     3661 gtttgaccat cgctgtccat aatggtcgtc agcacgttcc ggtatttgta accgacgaaa
     3721 tggtcggtca caaactgggt gaattcgcac cgactcgtac ttatcgcggc cacgctgctg
     3781 ataaaaaagc gaagaagaaa taaggtagga ggaagagatg gaaactatcg ctaaacatcg
     3841 ccatgctcgt tcttctgctc agaaggttcg ccttgttgct gacctgattc gcggtaagaa
     3901 agtgtcgcag gctctggata ttttgaccta caccaacaag aaagcggctg tactggtcaa
     3961 gaaagttctg gaatctgcca ttgctaacgc tgaacacaac gatggcgctg acattgacga
     4021 tctgaaagtt acgaaaattt tcgtagacga aggcccgagc atgaagcgca ttatgccgcg
     4081 tgcaaaaggt cgtgcagatc gcatcctgaa gcgcaccagc cacatcactg tggttgtgtc
     4141 cgatcgctga gactctggag actagcaatg ggtcagaaag tacatcctaa tggtattcgc
     4201 ctgggtattg taaaaccatg gaactctacc tggtttgcga acaccaaaga attcgctgac
     4261 aacctggaca gcgattttaa agtacgtcag tacctgacta aggaactggc taaagcgtcc
     4321 gtatctcgta tcgttatcga gcgtccggct aagagcatcc gtgtaaccat tcacactgct
     4381 cgcccgggta tcgttatcgg taaaaaaggt gaagacgtag aaaaactgcg taaggtcgta
     4441 gcggacatcg ctggcgttcc tgcacagatc aacatcgccg aagttcgtaa gcctgaactg
     4501 gacgcaaaac tggttgctga cagcatcact tctcagctgg aacgtcgcgt tatgttccgt
     4561 cgtgctatga agcgtgctgt acagaacgca atgcgtctgg gcgctaaagg tattaaagtt
     4621 gaagttagcg gccgtctggg cggcgcggaa atcgcacgta ccgaatggta ccgcgaaggt
     4681 cgcgtaccgc tgcacactct gcgtgctgac atcgactaca acacctctga agcgcacacc
     4741 acttacggtg taatcggcgt taaagtgtgg atcttcaaag gcgagatcct gggtggtatg
     4801 gctgctgttg aacaaccgga aaaaccggct gctcagccta aaaagcagca gcgtaaaggc
     4861 cgtaaataag gagcgtcgct gatgttacaa ccaaagcgta caaaattccg taaaatgcac
     4921 aaaggccgta accgcggtct ggcgcagggt acggatgtta gcttcggcag cttcggtctg
     4981 aaagctgttg gccgtggtcg tctgactgcc cgtcagatcg aagcagcacg tcgtgctatg
     5041 acccgtgcag ttaagcgtca aggtaagatc tggatccgtg tgttcccgga caaaccgatc
     5101 actgaaaagc cgctggcagt gcgtatgggt aaaggtaaag gtaacgtgga gtattgggtt
     5161 gccttgattc agccgggtaa agtcctgtat gaaatggacg gtgttccgga agagctggcc
     5221 cgtgaagcat tcaagctggc agcagcgaaa ctgccgatta aaaccacctt tgtaactaag
     5281 acggtgatgt aatgaaagca aaagagctgc gtgagaagag cgttgaagag ctgaacaccg
     5341 agctgctgaa cctgctgcgt gagcagttca acctgcgtat gcaggctgca agtggccagc
     5401 tgcaacagtc tcacctgttg aagcaagtgc gtcgcgatgt cgcacgcgtt aagactttac
     5461 tgaacgagaa ggcgggtgcg taatgaccga taaaatccgt actctgcaag gtcgcgttgt
     5521 tagcgacaaa atggagaaat ccattgttgt tgctatcgaa cgttttgtga aacacccgat
     5581 ctacggtaaa ttcatcaagc gtacgaccaa actgcacgta catgacgaga acaacgaatg
     5641 cggtatcggt gacgtggttg aaatccgcga atgccgtccg ctgtccaaga ctaaatcctg
     5701 gacgctggtt cgcgttgtag agaaagcggt tctgtaatac agtacactct ctcgatacga
     5761 ataaacggct cagaaatgag ccgtttattt tttctatcca tatccttgaa gcggtgttat
     5821 aatgccgcgc cctcgatatg gggattttta acgacctgat tttcgggtct cagtagtagt
     5881 tgacattagc ggagcactaa aatgatccaa gaacagacta tgctgaacgt cgccgacaac
     5941 tccggtgcac gtcgcgtaat gtgtatcaag gttctgggtg gctcgcaccg tcgctacgca
     6001 ggcgtaggcg acatcatcaa gatcaccatc aaagaagcaa ttccgcgtgg taaggtcaaa
     6061 aaaggtgatg tgctgaaggc ggtagtggtg cgcaccaaga agggtgttcg tcgcccggac
     6121 ggttctgtca ttcgcttcga tggtaatgct tgtgttcttc tgaacaacaa cagcgagcag
     6181 cctatcggta cgcgtatttt tgggccggta actcgtgagc ttcgtagtga gaagttcatg
     6241 aaaattatct ctctggcacc agaagtactc taaggagcga atcatggcag cgaaaatccg
     6301 tcgtgatgac gaagttatcg tgttgaccgg taaagataaa ggtaaacgcg gtaaagttaa
     6361 gaatgtcctg tcttccggca aggtcattgt tgaaggtatc aacctggtta agaaacatca
     6421 gaagccggtt ccggccctga accaaccggg tggcatcgtt gaaaaagaag ccgctattca
     6481 ggtttccaac gtagcaatct tcaatgcggc aaccggcaag gctgaccgtg taggctttag
     6541 attcgaagac ggcaaaaaag tccgtttctt caagtctaac agcgaaacta tcaagtaatt
     6601 tggagtagta cgatggcgaa actgcatgat tactacaaag acgaagtagt taaaaaactc
     6661 atgactgagt ttaactacaa ttctgtcatg caagtccctc gggtcgagaa gatcaccctg
     6721 aacatgggtg ttggtgaagc gatcgctgac aaaaaactgc tggataacgc agcagcagac
     6781 ctggcagcaa tctccggtca aaaaccgctg atcaccaaag cacgcaaatc tgttgcaggc
     6841 ttcaaaatcc gtcagggcta tccgatcggc tgtaaagtaa ctctgcgtgg cgaacgcatg
     6901 tgggagttct ttgagcgcct gatcactatt gctgtacctc gtatccgtga cttccgtggc
     6961 ctgtccgcta agtctttcga cggtcgtggt aactacagca tgggtgtccg tgagcagatc
     7021 atcttcccag aaatcgacta cgataaagtc gaccgcgttc gtggtttgga tattaccatt
     7081 accactactg cgaaatctga cgaagaaggc cgcgctctgc tggctgcctt tgacttcccg
     7141 ttccgcaagt aaggtagggt tactaaatgg ctaagcaatc aatgaaagca cgcgaagtaa
     7201 aacgcgtagc tttagctgat aaatacttcg cgaaacgcgc tgaactgaaa gcgatcatct
     7261 ctgatgtgaa cgcttccgac gaagatcgtt ggaacgctgt tctcaagctg cagactctgc
     7321 cgcgtgattc cagcccgtct cgtcagcgta accgctgccg tcaaacaggt cgtccgcatg
     7381 gtttcctgcg gaagttcggg ttgagccgta ttaaggtccg tgaagccgct atgcgcggtg
     7441 aaatcccggg tctgaaaaag gctagctggt aattgtcacc aattgaatca cgggagtaaa
     7501 gacagatgag catgcaagat ccgatcgcgg atatgctgac ccgtatccgt aacggtcagg
     7561 ccgcgaacaa agctgcggtc accatgcctt cctccaagct gaaagtggca atcgccaacg
     7621 tgctgaagga agaaggtttt attgaagatt ttaaagttga aggcgacacc aagcctgaac
     7681 tggaacttac tctgaagtat ttccagggca aagctgttgt agaaagcatt cagcgtgtca
     7741 gccgcccagg tctgcgcatc tataaacgta aagatgagct gccgaaagtt atggcgggtc
     7801 tgggtatcgc agttgtttct acctctaaag gtgttatgac tgatcgtgca gcgcgccagg
     7861 ctggtcttgg tggcgaaatt atctgctacg tagcctaatc ggaggaaaaa atgtctcgtg
     7921 ttgctaaagc accggtcgtt gttcctgccg gcgttgacgt aaaaatcaac ggtcaggtta
     7981 ttacgatcaa aggtaaaaac ggcgagctga ctcgtactct caacgatgct gttgaagtta
     8041 aacatgcaga taataccctg accttcggtc cgcgtgatgg ttacgcagac ggttgggcac
     8101 aggctggtac cgcgcgtgcc ctgctgaact caatggttat cggtgttacc gaaggcttca
     8161 ctaagaagct gcagctggtt ggtgtaggtt accgtgcagc ggttaaaggt aatgtgatta
     8221 acctgtctct gggtttctct catcctgttg accatcagct gcctgcgggt atcactgctg
     8281 aatgtccgac tcagactgaa atcgtgctga aaggcgctga taagcaggtg atcggccagg
     8341 ttgcagcgga tctgcgcgcc taccgtcgtc ctgagcctta taaaggcaag ggtgttcgtt
     8401 acgccgacga agtcgtgcgt accaaagagg ctaagaagaa gtaaggtaac actatggata
     8461 agaaatctgc tcgtatccgt cgtgcgaccc gcgcacgccg caagctccag gagctgggcg
     8521 caactcgcct ggtggtacat cgtaccccgc gtcacattta cgcacaggta attgcaccga
     8581 acggttctga agttctggta gctgcttcta ctgtagaaaa agctatcgct gaacaactga
     8641 agtacaccgg taacaaagac gcggctgcag ctgtgggtaa agctgtcgct gaacgcgctc
     8701 tggaaaaagg catcaaagat gtatcctttg accgttccgg gttccaatat catggtcgtg
     8761 tccaggcact ggcagatgct gcccgtgaag ctggccttca gttctaaggt agaggtgtaa
     8821 gatggctcac atcgaaaaac aagctggcga actgcaggaa aagctgatcg cggtaaaccg
     8881 cgtatctaaa accgttaaag gtggtcgtat tttctccttc acagctctga ctgtagttgg
     8941 cgatggtaac ggtcgcgttg gttttggtta cggtaaagcg cgtgaagttc cagcagcgat
     9001 ccagaaagcg atggaaaaag cccgtcgcaa tatgattaac gtcgcgctga ataacggcac
     9061 tctgcaacac cctgttaaag gtgttcacac gggttctcgc gtattcatgc agccggcttc
     9121 cgaaggtacc ggtatcatcg ccggtggtgc aatgcgcgcc gttctggaag tcgctggggt
     9181 tcataacgtt ctggctaaag catatggttc caccaacccg atcaacgtgg ttcgtgcaac
     9241 tattgatggc ctggaaaata tgaattctcc agaaatggtc gctgccaagc gtggtaaatc
     9301 cgttgaagaa attctgggga aataaaccat ggcaaagact attaaaatta ctcaaacccg
     9361 cagtgcaatc ggtcgtctgc cgaaacacaa ggcaacgctg cttggcctgg gtctgcgtcg
     9421 tattggtcac accgtagagc gcgaggatac tcctgctatt cgcggtatga tcaacgcggt
     9481 ttccttcatg gttaaagttg aggagtaaga gatgcgttta aatactctgt ctccggccga
     9541 aggctccaaa aaggcgggta aacgcttggg tcgtggtatc ggttctggcc tcggtaaaac
     9601 cggtggtcgt ggtcacaaag gtcagaagtc tcgttctggc ggtggcgtac gtcgcggttt
     9661 cgagggtggt cagatgcctc tgtaccgtcg tctgccgaaa ttcggcttca cttctcgtaa
     9721 agcagcgatt acagccgaag ttcgtctgtc tgacctggct aaagtagaag gcggtgttgt
     9781 agacctgaac acgctgaaag cggctaacat tatcggtatc cagatcgagt tcgcgaaagt
     9841 gatcctggct ggcgaagtaa cgactccggt aactgttcgt ggcctgcgtg ttactaaagg
     9901 cgctcgtgct gctatcgaag ctgctggcgg taaaatcgag gaataagtag cagatggcta
     9961 aacaaccggg attagatttt caaagtgcca aaggtggctt aggcgagctg aaacgcagac
    10021 tgctgtttgt tatcggtgcg ctgattgtgt tccgtattgg ctcttttatt ccgatccctg
    10081 gtattgatgc cgctgtactt gccaaactgc ttgagcaaca gcgaggcacc atcattgaga
    10141 tgtttaacat gttctctggt ggtgctctca gccgtgcttc tatctttgct ctggggatca
    10201 tgccgtatat ttcggcgtcg atcattatcc agctgctgac ggtggttcac ccaacgttgg
    10261 cggaaattaa gaaagaaggg gagtctggtc gtcgtaagat cagccagtac acccgctacg
    10321 gtactctggt gctggcaata ttccagtcga tcggtattgc taccggtctg ccgaatatgc
    10381 ctggtatgca aggcctggtg attaacccgg gctttgcatt ctacttcacc gctgttgtaa
    10441 gtctggtcac aggaacgatg ttcctgatgt ggttgggcga acagatcact gaacgaggta
    10501 tcggcaacgg tatttcaatc attatcttcg ccggtattgt cgcgggactc ccgccagcca
    10561 ttgcccatac tatcgagcaa gcgcgtcaag gcgacctgca cttcctcgtg ttgctgttgg
    10621 ttgcagtatt agtatttgca gtgacgttct ttgtcgtatt tgttgagcgt ggtcaacgcc
    10681 gcattgtggt aaactacgcg aaacgtcagc aaggtcgtcg tgtctatgct gcacagagca
    10741 cacatttacc gctgaaagtg aatatggcgg gggtaatccc ggcaatcttc gcttccagta
    10801 ttattctgtt cccggcgacc atcgcgtcat ggttcggggg cggtactggt tggaactggc
    10861 tgacaacaat ttcgctgtat ttgcagcctg ggcaaccgct ttatgtgtta ctctatgcgt
    10921 ctgcaatcat cttcttctgt ttcttctaca cggcgttggt tttcaacccg cgtgaaacag
    10981 cagataacct gaagaagtcc ggtgcatttg taccaggaat tcgtccggga gagcaaacgg
    11041 cgaagtatat cgataaagta atgacccgcc tgaccctggt tggtgcgctg tatattacct
    11101 ttatctgcct gatcccggag ttcatgcgtg atgcaatgaa agtaccgttc tacttcggtg
    11161 ggacctcact gcttatcgtt gttgtcgtga ttatggactt tatggctcaa gtgcaaactc
    11221 tgatgatgtc cagtcagtat gagtctgcat tgaagaaggc gaacctgaaa ggctacggcc
    11281 gataattggt cgcccgagaa gttacggaga gtaaaaatga aagttcgtgc ttccgtcaag
    11341 aaattatgcc gtaactgcaa aatcgttaag cgtgatggtg tcatccgtgt gatttgcagt
    11401 gccgagccga agcataaaca gcgccaaggc tgattttttc gcatattttt cttgcaaagt
    11461 tgggttgagc tggctagatt agccagccaa tcttttgtat gtctgtgcgt ttccatttga
    11521 gtatcctgaa aacgggcttt tcagcatgga acgtacatat taaatagtag gagtgcatag
    11581 tggcccgtat agcaggcatt aacattcctg atcataagca tgccgtaatc gcattaactt
    11641 cgatttatgg cgtcggcaag acccgttcta aagccatctt ggctgcagcg ggtatcgctg
    11701 aagatgttaa gatcagtgag ctgtctgaag gacaaatcga cacgctgcgt gacgaagttg
    11761 ccaaatttgt cgttgaaggt gatctgcgcc gtgaaatcag catgagcatc aagcgcctga
    11821 tggatcttgg ttgctatcgc ggtttgcgtc atcgtcgtgg tctcccggtt cgcggtcagc
    11881 gtaccaagac caacgcacgt acccgtaagg gtccgcgcaa accgatcaag aaataatcgg
    11941 ggtgattgaa taatggcaaa ggcaccaatt cgtgcacgta aacgtgtaag aaaacaagtc
    12001 tctgacggcg tggctcatat ccatgcttct ttcaacaaca ccatcgtgac tatcactgat
    12061 cgtcagggta acgcgttggg ttgggcaaca gccggtggtt ccggtttccg tggttctcgc
    12121 aaatccactc cgtttgcagc tcaggttgca gcagagcgtt gcgctgacgc cgtgaaagaa
    12181 tacggcatca agaatctgga agttatggtt aaaggtccgg gtccaggccg cgaatctact
    12241 attcgtgctc tgaacgccgc aggtttccgc atcactaaca ttactgatgt gactccgatc
    12301 cctcataacg gttgtcgtcc gccgaaaaaa cgtcgcgtat aacgcctcgt tttccaggtt
    12361 tgttggagaa agaaaatggc aagatatttg ggtcctaagc tcaagctgag ccgtcgtgag
    12421 ggcaccgact tattccttaa gtctggcgtt cgcgcgatcg ataccaagtg taaaattgaa
    12481 caagctcctg gccagcacgg tgcgcgtaaa ccgcgtctgt ctgactatgg tgtgcagttg
    12541 cgtgaaaagc aaaaagttcg ccgtatctat ggtgtgctgg agcgtcagtt ccgtaactac
    12601 tacaaagaag cagcacgtct gaaaggcaac accggtgaaa acctgttggc tctgctggaa
    12661 ggtcgtctgg acaacgttgt ataccgtatg ggcttcggtg ccactcgtgc agaagcacgt
    12721 cagctggtta gccataaagc aattatggta aacggtcgtg ttgttaacat cgcttcttat
    12781 caggttagtc cgaatgacgt tgtaagcatt cgtgagaaag cgaagaagca gtctcgcgtg
    12841 aaagccgctc tggagctggc tgagcagcgt gaaaagccaa cttggctgga agttgatgct
    12901 ggcaagatgg aaggtacgtt taagcgtaag ccggagcgtt ctgatctgtc tgcggacatt
    12961 aacgaacacc tgatcgtcga gctttactcc aagtaaagct tagtaccaaa gagaggacac
    13021 aatgcagggt tctgtgacag agtttctaaa accgcgcctg gttgatatcg agcaagtgag
    13081 ttcgacgcac gccaaggtga cccttgagcc tttagagcgt ggctttggcc atactctggg
    13141 taacgcactg cgccgtattc tgctctcatc gatgccgggt tgcgcggtga ccgaggttga
    13201 gattgatggt gtactacatg agtacagcac caaagaaggc gttcaggaag atatcctgga
    13261 aatcctgctc aacctgaaag ggctggcggt gagagttcag ggcaaagatg aagttattct
    13321 taccttgaat aaatctggca ttggccctgt gactgcagcc gatatcaccc acgacggtga
    13381 tgtcgaaatc gtcaagccgc agcacgtgat ctgccacctg accgatgaga acgcgtctat
    13441 tagcatgcgt atcaaagttc agcgcggtcg tggttatgtg ccggcttcta cccgaattca
    13501 ttcggaagaa gatgagcgcc caatcggccg tctgctggtc gacgcatgct acagccctgt
    13561 ggagcgtatt gcctacaatg ttgaagcagc gcgtgtagaa cagcgtaccg acctggacaa
    13621 gctggtcatc gaaatggaaa ccaacggcac aatcgatcct gaagaggcga ttcgtcgtgc
    13681 ggcaaccatt ctggctgaac aactggaagc tttcgttgac ttacgtgatg tacgtcagcc
    13741 tgaagtgaaa gaagagaaac cagagttcga tccgatcctg ctgcgccctg ttgacgatct
    13801 ggaattgact gtccgctctg ctaactgcct taaagcagaa gctatccact atatcggtga
    13861 tctggtacaa cgtaccgagg ttgagctcct taaaacgcct aaccttggta aaaaatctct
    13921 tactgagatt aaagacgtgc tggcttcccg tggactgtct ctgggcatgc gcctggaaaa
    13981 ctggccaccg gcaagcatcg ctgacgagta accggatcac aggttaaggt tttactgaga
    14041 aggataaggt catgcgccat cgtaagagtg gtcgtcaact gaaccgcaac agcagccatc
    14101 gccaggctat gttccgcaat atggcaggtt cactggttcg tcatgaaatc atcaagacga
    14161 ctctgcctaa agcgaaagag ctgcgccgcg tagttgagcc gctgattact cttgccaaga
    14221 ctgatagcgt tgctaatcgt cgtctggcat tcgcccgtac tcgtgataac gagatcgtgg
    14281 caaaactgtt taacgaactg ggcccgcgtt tcgcgagccg tgccggtggt tacactcgta
    14341 ttctgaagtg tggcttccgt gcaggcgaca acgcgccgat ggcttacatc gagctggttg
    14401 atcgttcaga gaaagcagaa gctgctgcag agtaatctga agcaacgtaa aaaaacccgc
    14461 cccggcgggt ttttttatac ccgtagcatc cccacttatc tacaatagct gtactctttt
    14521 tgttcatccc ctggagtatt tatgtggtta cttgaccagt gggcagagcg tcatatagca
    14581 gaagcgcaag cgaaaggtga gtttgataac ctggcaggta gcggcgaacc attgatactg
    14641 gatgatgatt ctcatgtgcc accggaatta cgtgcggggt atcgcttgct gaagaatgcc
    14701 ggttgcttac cgccagaact tgagcagcgg agggaagcaa ttcagcttct ggatatcctg
    14761 agaggtatcc gtcacgatga tccgcaatat caagaggtta gccgtcgatt gtcattactg
    14821 gaattgaagc tgcgacaagc tggattgagt accgattttt tacgcggcga ttatgctgac
    14881 aagttgttgg acaaaatcaa cgataactag tggagtatgt atgtatcgca ttggtgagct
    14941 ggcaaaaatg gcggaagtaa cacctgacac gattcgttat tacgaaaaac agcagatgat
    15001 ggagcatgaa gtgcgtactg aaggcgggtt tcgcctgtat accgaaagcg atctccagcg
    15061 attgaaattt atccgccatg ccagacaact aggtttcagt ctggagtcga tccgcgagtt
    15121 gctgtcgatc cgcatcgatc ctgaacacca tacctgtcag gagtcaaaag gcattgtgca
    15181 ggaaagattg caggaagtcg aagcacggat agccgagttg cagagtatgc agcgttcctt
    15241 gcaacgcctt aacgatgcct gttgtgggac cgcccatagc agtgtttatt gttcgattct
    15301 tgaagctctt gaacaagggg cgagtggcgt taagagtggc tgttgatttt ttgcactggc
    15361 aggattacac tcgcgccgta aaataaccaa ttggagtttt tatgagccga tatcagcata
    15421 ctaaagggca gataagggat aatgcgatag aagcattact acatgatccc ttattccgac
    15481 agcgcgtaga gaaaaataag aaggggaaag gcagttacat gcgaaaagga aaacatggca
    15541 atcgggggaa ctgggaggcc agtggcaaga aagtaaatca cttttttacc actggtcttc
    15601 tgctttcagg cgcttgttaa gagcggttat tctgctcttt cagcaaatca cgaatttctg
    15661 ccagtaatac ttcttcttta gttggtgcag gtgcggcagc tggttcttct tttttccgat
    15721 tcagtttgtt gattagctta atcgccataa agatggcaaa ggccacaatc agaaaatcaa
    15781 agacgttttg aatgaagaca ccgtaatgca tcacaacagc agggatatcc ccctgcgcat
    15841 cgcgtagcgt gacagcaaac tgtttaaagt cgatcccgcc aattaataag cccagaggtg
    15901 gcatgatgat atcggcaacc agtgaagata caatcttccc gaatgccgca ccgataatga
    15961 cacccaccgc caaatccacc acgttcccgc gcatcgcaaa ttcgcgaaat tctttaataa
    16021 tgctcatgtt attctcccta tgaagccgac aaccataagt ctaacaaatg ttaagccatt
    16081 ttcctgccag gaatgaattt aattaatcct tgataatcaa agggaaataa taaggcgtca
    16141 ttagacgcct tattaattac aagaagaaag ggcttggctg gaagagtctt tcgacgtcgg
    16201 taataaactt tttatctgtg aggaacataa ttacgtgatc gccttgctca atgcgcagat
    16261 tgtcattggc aatcatcacg tcgtttccac gtaccaccgc tccaataatc gttcctggcg
    16321 gtagcttgat ttcgtcaatg actctgccga caacgcgtga ggtgctttca tcaccgtgag
    16381 caacggcttc aatagcttct gctacgccgc ggcgcaatga ggaaacacca acaatatctg
    16441 cttttcgcac atggctaagc aacgcagaaa tagttgcttg ttgtggtgaa attgcaatat
    16501 cgatcacgct cccctgaacc agatccacat aagcgcgacg ctggatcaat accatcacct
    16561 ttttcgcacc catacgtttg gcaagcatgg cggacatgat attggcctcg tcatcgttgg
    16621 tgacggcaat aaacagatca acttgatcga tatgttcttc ggccagcagt tcttgatccg
    16681 acgcatcacc aaaaaagacg atcgtattct gcaacttttc cgccagttcg gcagcgcgct
    16741 gctgattacg ttcgatgagt ttaacgctgt aatctttttc cagacgacgc gccagccctg
    16801 caccgatatt accgccacca accagcatga tccgcttata cggtttttcc agtcgctgta
    16861 attcactcat caccgcgcgg atatgctgtg aagcggcaat aaagaacact tcatcaccag
    16921 cttcaacaat ggtcgaacct tgtggacgaa tggggcgatc gtggcggaaa attgctgcca
    16981 cacgagtatc gatatgtggc atatgttcgc gcatggtcga aagtgcatta ccaatcagcg
    17041 ggccgccata ataggcttta actacagcga ggctgacttt accctcagcg aagttcacca
    17101 cctgcaatgc gcctggatac tcaatcagtc ggtaaatatt atcgataacc aactgctctg
    17161 gtgcgatcag atgatcaatc ggtacagcat ctgaatgaaa tagcttatcg gcatcgcgta
    17221 cgtagtctgg tgagcggatg cgagcgatgc gattaggggt gttgaaaagt gagtaggcta
    17281 cctggcaggc aaccatattg gtttcatctg aactggttac agcaaccagc atatcggcgt
    17341 cgtcggcacc tgcctcccgc aatacgcgtg gatgagagcc atgcccctgc acgactcgca
    17401 ggtcaaattt atcctgcaag gtccgcagac gctcaccgtt ggtatcgaca acagtaatat
    17461 cgttgttctc gccaaccagg ttttccgcca gtgtgccgcc aacctggccg gcacccagaa
    17521 tgataatttt catcagtctc gacccgttat ctcatcactt tttgattagc ttagcgtaaa
    17581 agaagccgtc gccctcttcg gcaccaggca gattttgttt acccggttgc tctggtgctc
    17641 ctgtttcgca aagttcggca tcagcggtac gttgcaaaaa agctttaatc tgcaggctat
    17701 tctcttccgg taacaccgaa caggtggcat agaccagggt tccaccggat tttaaatgcg
    17761 gccaaatggc gtcgagaatt tcagactgca attgcgcgag ttccgggata tcgcgatcgc
    17821 gacgtaacca tttaatatcc ggatggtgac gaatcacccc cgttgctgaa caaggcgcat
    17881 ctaataaaat gcgatcaaac tgttgctcgc cacaccattg ggaagggtaa cggccatcac
    17941 cttgtttcac ggttgccttc ataccaaggc gttttaaatt gtcgtaaacg cgagagaggc
    18001 gctgttcgtc aatatcaacc gcaacaacct gcgcttctgg tgccacctca aggatatgcg
    18061 ttgttttacc gccgggggcg gcacaaagat ccagaatgtg ttcactgttt tgtggcgcaa
    18121 gccaggtcat gcaaccttgt gctgatgcat cctgaacggt aacccatccg tcttcaaaac
    18181 caggtagcgc atgaacaggt gcaggtgttt ccagacgtac agcatcaggg taatccgcat
    18241 gcgggaaacc tttcattcct gcttcatcca gcaatgcaag ccagctgtcg cgggaatgat
    18301 gcgtacgatt aacgcgcagc cacattggcg gacgctggtt attggcttcg acgatggatt
    18361 gccactgctc tggatacgct ttttgcagac gcttcagcaa ccaggaagga tgcagataac
    18421 gtgcatcact ggcattaaac ttggctaata actcttcttg ctgacgctgg aactggcgta
    18481 atacaccgtt aatcaaccct ttaagttgcg gacgcttaat tgcgatagcg ccttcaaccg
    18541 tttcagccag cgcagcatga ggtggaatgc gggtataaag cagttgatac aaaccaacca
    18601 taatcaggta atgcacagtg cgctgtttgc cggtcatcgg acgggccatt aacttattaa
    18661 tcagccagtc taactgcgaa agcgtacgca gtacgccaaa gcacaactct tgaagaagtg
    18721 ctttgtcttt atcagaaact ttttgctgga gcggtggcag aatgttgctt aatgattgcc
    18781 cttgctcgac gacttgttca acggcctggg ccgccatgct acgtaaatta cgttgttttt
    18841 tcataagtat aaaaatgccc ggtaagaccg ggcttagaag agtggactat caggccagac
    18901 ggttgcccgg aacaaaccat tcccgacgag aattcaggag gtcttgcgcg ctcatcgctt
    18961 tcttacccgc aggttgtaac gagagcagat tcaggattcc atcaccagtt gcaacctgaa
    19021 tgccttgttt gttggcttca aggatcgttc ctggtgcagc gttggttgcc gtatcaatga
    19081 ccgacgcttt ccagacttta accggctgtc tttcaatttc cagccagctc attggccatg
    19141 gattgaaagc gcgaatgcag cgttcaagct gtgctgccga aagtgaccag tcaatacgcg
    19201 cttcttcttt actcaacttt tcggcgtaag tgacaagagt tttgtcctga acttctggtt
    19261 tcgccgtgcc gtctgccagt tgtttcaacg tggtgataag cccttgtggg ccaagctctg
    19321 ccagcttgtc gtacagcgta ccactggtat cttctgcagt aatcgggcag gagagcttat
    19381 agagcatgtc accggtgtct aaaccgacat ccatttgcat aatggtcaca ccagtttctg
    19441 catcacccgc ccatagtgag cgttggattg gtgcagcacc gcgccagcgt ggcagcagtg
    19501 aaccatgaac gttgatacag ccaagacgcg gcatctccag cactgcttta ggcagaatta
    19561 agccataggc gacgacgacc ataacatcag cctgcagatc ggcgaccagt tgctggtttt
    19621 cttgtggacg cagggaaaca ggttgaaaaa cgggcagacc tttttcctca gccagaactt
    19681 taaccgggct gggcatcagt tttttaccgc gtcctgccgg tcggtctggc tgggtgaaca
    19741 cgccaacgac gttatgacca gaagacaaca gcgcgtcgag atgacgcgct gcaaagtcag
    19801 gtgtacccgc aaaaataata cgtagtgatt ctgacacgtt agttcttatc cttaagcccg
    19861 ggctttcaga cgatccagtt tttcaacttt ctgacgaata cgttgttgtt tcaacggtga
    19921 cagataatcc ataaacagtt tgccgaccag gtgatccatc tcatgctgaa tacagatggc
    19981 taacagaccg tctgcttcca attcaaatgg tttaccgtcg cggtccaggg cgcgaatttt
    20041 aactttctct gcgcgtggca ctaaagcacg ttgtttaggg atcgacaggc aaccttcttc
    20101 aatgcctgtt tcgccgcttt tttctaaaag ctccggattg attaacacca gccgttcgtc
    20161 acggttttcc gaaacatcaa taacaatgat acgttgatgg atatcaacct gggttgccgc
    20221 caggccaata ccttcttctg cgtacatcgt ctcgaacata tcatcgacga tacgctgaat
    20281 ttctgcattc acttcttcta ccggtttagc aactttgcga agccgctcgt ccggaatatg
    20341 taacacttgc aaaactgaca taaatctcca gagatgtgtt caggagttag aaagattatt
    20401 tcttctattc tagacaaatc cccctctgat tgacagcatc actgaccaat cgcaaagatt
    20461 gctaaggctg cttatggcag ggagataagg atggtcgata cagatatttg gctgcgttta
    20521 atgagcatca gcagcttgta cggcgatgat atggtccgta tagctcactg gctggcaaaa
    20581 cagtcgcata ttgatgcggt tgtattgcag caaacagggc ttacattgcg gcaggcacaa
    20641 cgctttcttt catttccgcg aaagagtatc gaaagctcac tttgttggtt ggagcaaccc
    20701 aatcatcatt taatccctgc ggacagcgaa ttttatcctc ctcaacttct ggcgacgaca
    20761 gattaccccg gcgcactgtt tgttgaagga gaactgcacg cgctgcattc atttcagctt
    20821 gccgtagtgg ggagtcgggc gcattcatgg tatggcgagc gatggggacg attattttgc
    20881 gaaactctgg ccacgcgtgg agtgacaatt acgagtggac tggcgcgtgg aatcgatggt
    20941 gtggcgcata aagcggcctt acaggtaaat ggcgtcagca ttgctgtatt ggggaacgga
    21001 cttaatacca ttcatccgcg ccgccatgcc cgactggcta ccagtttgct tgaacatggt
    21061 ggggcacttg tctcggaatt tcccctcgat gttccacccc ttgcttacaa tttcccacga
    21121 agaaatcgca ttatcagtgg tctaagtaaa ggtgtactgg tggtggaagc ggctttgcgc
    21181 agtggttcgt tggtgacagc acgttgtgcg cttgagcagg ggcgtgaagt ttttgccttg
    21241 ccaggaccaa tagggaatcc gggaagcgaa gggcctcact ggttaataaa acaaggtgcg
    21301 attcttgtga cggaaccgga agaaattctg gaaaacttgc aatttggatt gcactggttg
    21361 ccagacgccc ctgaaaattc attttattca ccagatcagc aagacgtggc attgccattt
    21421 cctgagctcc tggctaacgt aggagatgag gtaacacctg ttgacgtcgt cgctgaacgt
    21481 gccggccaac ctgtgccaga ggtagttact caactactcg aactggagtt agcaggatgg
    21541 atcgcagctg tacccggcgg ctatgtccga ttgaggaggg catgccatgt tcgacgtact
    21601 aatgtatttg tttgaaacct atattcacac agaagctgag ttgcgtgtgg atcaagacaa
    21661 acttgaacag gatcttaccg acgcaggatt tgatcgagaa gatatctaca atgccctgct
    21721 ttggctggaa aagcttgcgg attatcagga aggactgaca gaaccgatgc aactggcctc
    21781 tgatccactc tccatgcgta tttatacccc tgaggagtgt gaaagactgg atgccagctg
    21841 tcgtggtttt ctgcttttcc ttgagcaaat tcaggtgctt aaccttgaaa tccgtgaaat
    21901 ggtgatagag cgagtgctcg cgctggatac cgcagagttc gacctggaag acctgaaatg
    21961 ggtaatcctg atggtgttgt tcaatattcc gggctgcgaa aatgcgtacc agcaaatgga
    22021 agaattactc tttgaagtga atgaaggtat gctgcattaa tcattccttt aattcagcat
    22081 aagttgttat ggcgaaatca gcactgttca cggtgcgtaa taatgagtcc tgcccaaagt
    22141 gcggggctga actggttatt cgatccggga aacacggtcc gtttcttgga tgctcacagt
    22201 atccggcgtg tgactacgtc cgtcctctga aatcttcagc ggatggacat attgtcaaag
    22261 ttctggaggg gcaggtttgc cctgcatgtg gcgcaaatct ggtattacgc cagggacgct
    22321 ttggtatgtt tattggttgc agtaactacc ctgaatgcga acataccgaa cttatcgata
    22381 aaccggacga aacagcaatt acatgccccc aatgtcggac gggccatctg gtccagcgcc
    22441 gctcccgtta tggcaaaaca tttcactcct gtgatcgcta cccggagtgt caatttgcca
    22501 ttaacttcaa acccatagct ggagaatgcc ctgagtgtca ttatccacta ctcatcgaaa
    22561 agaaaaccgc gcagggtgta aaacactttt gtgccagtaa acaatgtgga aagccggttt
    22621 cggcggaata ataacgtgaa taataacctg caaggagacg ctatcgcagc tgcgatagat
    22681 gtcctcaatg aagaacgtgt catcgcctat ccaacggaag ccgttttcgg tgttgggtgc
    22741 gatcctgata gcgaaacagc agtgatgaga ctgttggagt taaaacagcg tccggttgat
    22801 aaggggctga ttttaatcgc ggcaaattac gagcagctta aaccctatat tgatgacacc
    22861 atgctgactg atgcgcagcg tgaaaccatt ttttcccgct ggccaggtcc tgtcaccttt
    22921 gtctttcccg cgcctgcgac aacaccgcgc tggttgacgg gccgctttga ttcgcttgct
    22981 gtacgagtca ccgaccatcc gttggtggtt gctttgtgcc aggcttatgg taaaccgctg
    23041 gtttctacca gtgccaactt gagtggattg ccaccttgtc gaacagtaga cgaagttcgc
    23101 gcacaatttg gcgcggcgtt cccggttgtg cctggtgaaa cgggggggcg tttaaatcct
    23161 tcagaaatcc gcgatgccct gacgggtgaa ctgtttcgac aggggtaaca taatggaaac
    23221 ctatgctgtt tttggtaatc cgatagccca cagcaaatcg ccattcattc atcagcaatt
    23281 tgctcagcaa ctgaatattg aacatcccta tgggcgcgtg ttggcaccca tcaatgattt
    23341 catcaacaca ctgaacgctt tctttagtgc tggtggtaaa ggtgcgaatg tgacggtacc
    23401 ttttaaagaa gaggcttttg ccagagcgga tgagcttact gaacgggcag cgttggctgg
    23461 tgctgttaat accctcaagc ggttagaaga tggacgcttg cagggtgaca ataccgatgg
    23521 tataggtttg ttaagcgatc tggaacgtct gtcttttatc cgtccgggtt tacgtattct
    23581 gcttatcggc gctggtggag catctcgcgg cgtactacta ccactccttt ccctggactg
    23641 tgcggtgaca atcactaatc ggacggtatc ccgtgcggaa gagttggcta aattgtttgc
    23701 gcacactggc agtattcagg cgttgggtat ggacgaactg gaaggtcatg agtttgatct
    23761 cattattaat gcaacatcca gtggcatcag tggtgatatt ccggcgatcc cgtcatcgct
    23821 cattcatcta ggcatttatt gctatgacat gttctatcag aaaggaaaaa ctccttttct
    23881 ggcatggtgt gagcagcgag gctcaaagcg taatgttgat ggtttaggaa tgctggtggc
    23941 acaggcggct catgcctttc ttctctggca cggtgttctg cctgacgtag aaccagttat
    24001 aaagcaattg caggaggaat tgtccgcgtg aatcaggcca tccagtttcc ggacagggaa
    24061 gagtgggacg agaataaaaa atgtgtatgt tttcccgctc tcgtgaatgg tatgcaactg
    24121 acatgcgcga tctctggcga gagtctggcg tatcgcttta ctggagatac gccagaacag
    24181 tggttagcga gttttcgtca gcatcgctgg gacctggaag aagaagcgga aaacttaatt
    24241 caggaacaaa gtgaagatga tcaaggctgg gtctggttac cctgatccag atattcgtcc
    24301 ttccatttca cgtaattatt cgcggaatag agtaacccag ccttctcttc atcacttaac
    24361 gggcggatct gtttgacggg gctaccgaga tacagatatc cgctctccag ccgtttattt
    24421 tgtgggacca gactacccgc accaatcatc acatcatctt ctactattgc gccatcaagt
    24481 aaaattgagc ccatcccaac caaaactcga ttgccaatgg tgcagccgtg gagcatcacc
    24541 ttgtgaccaa cagtgacatc ttcgccaatg gttaatgggt tgccatctgg gttgtacgag
    24601 gatttatgag tgacatgcaa catactgcca tcctggatat tggtgcgtgc tccgatctgt
    24661 acataatgta catctccacg aatcacaacg agcggccaga tccccacatc atcagccaga
    24721 cgaacgtcac caatcacgac actgctatcg tcgatcatta cgcgctgacc gatttgtgga
    24781 aaaagatcgc ggtatgggcg taaaacatca gacatactta cctcagcaat aaatgattta
    24841 ctaatgactt tgggggcatt attggccttg tgcaagtctt ttagtatgca aaaaagcacc
    24901 gttttgtgtg cgattgcagc aaaaagggtg aaaaaacaac aaacagaaaa aaagatcaaa
    24961 aaaatacttg tgcaaaatat tgggatccct ataatgcgcc tccgttgaga cgacaacgtg
    25021 aaacacttca caggatggtc ggaacaacga agagaaaaaa tcctgaaatt caggggtgac
    25081 tctgaaagag gaaagcgtaa tatacgccac ctcgcgacag tgagctgaaa gccgcgtcgc
//
LOCUS       DADMHC010000042        25110 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.042, whole genome shotgun sequence.
ACCESSION   DADMHC010000042 DADMHC010000000
VERSION     DADMHC010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 25110)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25110)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25110
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.042"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..602)
                     /locus_tag="JNZ57_001439"
     CDS             complement(<1..602)
                     /locus_tag="JNZ57_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HAY8827711.1"
                     /translation="MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLES
                     YPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVP
                     RDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNK
                     EIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNISS"
     gene            1122..2021
                     /locus_tag="JNZ57_001440"
     CDS             1122..2021
                     /locus_tag="JNZ57_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417978.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8827712.1"
                     /translation="MDKIHAMQLFIKVAELESFSRAADFFALPKGSVSRQIQALEHQL
                     GTQLLQRTTRRVKLTPEGMTYYQRAKDVLSNLNELDGLFQQDATSISGKLRIDIPPGI
                     AKNLLLPRLSEFLYLHPGIELELSSHDRPVDILHDGFDCVIRTGALPEDGVIARPLGK
                     LTMVNCASPHYLTRFGYPQSPDDLTSHAIVRYTPHLGVHPLGFEVASVNGVQWFKSGG
                     MLTVNSSENYLAAGLAGLGIIQIPRIAVREALRAGRLIEVLPGYRAEPLSLSLVYPQR
                     RELSRRVNLFMQWLAGVMKEHLD"
     gene            2070..3083
                     /gene="yhjD"
                     /locus_tag="JNZ57_001441"
     CDS             2070..3083
                     /gene="yhjD"
                     /locus_tag="JNZ57_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YhjD"
                     /protein_id="HAY8827713.1"
                     /translation="MTQENEIKRPTQDLEHEPIKQLDNSEKGGKVSQALETVTTTAEK
                     VQRQPVIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPML
                     LQDIFDKILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAI
                     RAQSRDVWERSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH
                     LNSIEWLKPTWRLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVI
                     KIVMTYTLPSLMKSPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMPGK
                     TQP"
     gene            3494..4816
                     /locus_tag="JNZ57_001442"
     CDS             3494..4816
                     /locus_tag="JNZ57_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter"
                     /protein_id="HAY8827714.1"
                     /translation="MQATATTLDHEQEYTPINSRNKVLVASLIGTAIEFFDFYIYATA
                     AVIVFPHIFFPQGDPTAATLQSLATFAIAFVARPIGSAVFGHFGDRVGRKATLVASLL
                     TMGISTVVIGLLPGYATIGIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRA
                     LYGSFPQLGAPIGFFFANGTFLLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVS
                     LHESPVFEKVAKAKKQVKIPLGTLLTKHVRVTVLGTFIMLATYTLFYIMTVYSMTFST
                     AAAPVGLGLPRNEVLWMLMMAVIGFGVMVPVAGLLADAFGRRKSMVIITTLIILFALF
                     AFNPLLGSGNPILVFAFLLLGLSLMGLTFGPMGALLPELFPTEVRYTGASFSYNVSSI
                     LGASVAPYIAAWLQTNYGLGAVGLYLAAMAGLTLIALLLTHETRHQSL"
     gene            complement(5050..7110)
                     /locus_tag="JNZ57_001443"
     CDS             complement(5050..7110)
                     /locus_tag="JNZ57_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417981.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HAY8827715.1"
                     /translation="MSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSA
                     ELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRV
                     EATLAPLALLTKTVWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWS
                     FRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFG
                     LKAQGRYNGEPLTGTGKIGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGG
                     VDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKIDTEKSSVFDYRGFNGRIGD
                     SDIHGSLVYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKS
                     VQPAGKVLPYDRFETDKWDVMDADVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQP
                     LKFGMAGGSIAANIHLEGDKKPMQGRADIQARRLKLKELMPDVELMQKTLGEMNGDAE
                     LRGSGNSVAALLGNSNGNLKLLMNDGLVSRNLMEIVGLNVGNYIVGAIFGDDEVRVNC
                     AAANLNIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSP
                     LYVRGTFKNPQAGVKAGPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILS
                     QMKK"
     gene            complement(7180..7947)
                     /gene="pdeH"
                     /locus_tag="JNZ57_001444"
     CDS             complement(7180..7947)
                     /gene="pdeH"
                     /locus_tag="JNZ57_001444"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417982.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase"
                     /protein_id="HAY8827716.1"
                     /translation="MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRL
                     MAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLA
                     SVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLGDF
                     GTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVE
                     TPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLAL"
     gene            7960..9108
                     /locus_tag="JNZ57_001445"
     CDS             7960..9108
                     /locus_tag="JNZ57_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709304.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY8827717.1"
                     /translation="MFKSDAARTRQRLSARKGRTLPPGRGKFPHSTTESFRNTFWLKK
                     IMEHCFNIVDQQTTTAQTNANFLQIRFTTMSKKIAVIGECMIELSEKGADVKRGFGGD
                     TLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGENVDISLTQRMENRLPGL
                     YYIETDSTGERTFYYWRNEAAAKFWLESEPSAAICEELANFDYLYLSGISLAILSPTS
                     REKLLSLLRECRANGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDA
                     LWGQQPVEDVIARTHNAGVKEVVVKRGADSCLVSIAGEGLVDVPAVKLPKEKVIDTTA
                     AGDSFSAGYLAVRLTGGSAENAAKRGHLTASTVIQYRGAIIPREAMPA"
     gene            complement(9204..10700)
                     /locus_tag="JNZ57_001446"
     CDS             complement(9204..10700)
                     /locus_tag="JNZ57_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HAY8827718.1"
                     /translation="MQGTKIRLLAGGLLMMATAGYVQADALQPDPAWQQGTLSNGLQW
                     QVLTTPQRPSDRVEIRLLVNTGSLAESTQQSGYSHAIPRIALTQSGGLDAAQARSLWQ
                     QGIDPKRPMPPVIVSYDTTLFNLSLPNNRNDLLKEALSYLANATGKLTITPETINHAL
                     QSQDMVATWPADTKEGWWRYRLKGSTLLGHDPADPLKQPVEAEKIKDFYQKWYTPDAM
                     TLLVVGNVDARSVVDQINKTFGELKGKRETPAPVPTLSPLRAEAVSIMTDAVRQDRLS
                     IMWDTPWQPIREAAALLRYWRADLAREALFWHVQQALSASNSKDIGLGFDCRVLYLRA
                     QCAINIESPNDKLNSNLNLVARELAKVRDKGLPEEEFNALVAQKKLELQKLFAAYARA
                     DTDILMGQRMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLNQDLRQQLSNDMALILL
                     QPKGEPEFNMKALQAAWDQIMAPSTAAAATSVATDDVHPEVTDIPPAQ"
     gene            complement(10921..12207)
                     /locus_tag="JNZ57_001447"
     CDS             complement(10921..12207)
                     /locus_tag="JNZ57_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="HAY8827719.1"
                     /translation="MKTSLFKSLYFQVLTAIAIGILLGHFYPEIGEQMKPLGDGFVKL
                     IKMIIAPVIFCTVVTGIAGMESMKAVGRTGAVALLYFEIVSTIALIIGLIIVNVVQPG
                     AGMNVDPATLDAKAVAVYADQAKDQGIVAFIMDVIPASVIGAFASGNILQVLLFAVLF
                     GFALHRLGSKGQLIFNVIESFSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQ
                     LGQLIICFYITCILFVVLVLGSIAKATGFSIFKFIRYIREELLIVLGTSSSESALPRM
                     LDKMEKLGCRKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNSQMDIVHQITLLI
                     VLLLSSKGAAGVTGSGFIVLAATLSAVGHLPVAGLALILGIDRFMSEARALTNLVGNG
                     VATIVVAKWVKELDHKKLDDVLNNRAPDGKTHELSS"
     gene            complement(12390..14378)
                     /gene="hmsP"
                     /locus_tag="JNZ57_001448"
     CDS             complement(12390..14378)
                     /gene="hmsP"
                     /locus_tag="JNZ57_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator HmsP"
                     /protein_id="HAY8827720.1"
                     /translation="MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTAT
                     QLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIP
                     ERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLV
                     TIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAQELVGHQLALPRLHQDDEIG
                     MLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIIT
                     CETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHA
                     ITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGK
                     NQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ
                     QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQL
                     MHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF
                     GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPEDSSMIAAIIMLAQSLNLQMIAEGVE
                     TEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK"
     gene            complement(14460..17920)
                     /gene="bcsC"
                     /locus_tag="JNZ57_001449"
                     /pseudo
     CDS             complement(14460..17920)
                     /gene="bcsC"
                     /locus_tag="JNZ57_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026226.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsC"
     gene            complement(17902..19008)
                     /gene="bcsZ"
                     /locus_tag="JNZ57_001450"
     CDS             complement(17902..19008)
                     /gene="bcsZ"
                     /locus_tag="JNZ57_001450"
                     /EC_number="3.2.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase"
                     /protein_id="HAY8827721.1"
                     /translation="MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVID
                     PSDARKITTSEGQSYGMFFALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKE
                     NSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLG
                     SMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFS
                     PDWVRYEKDKGWQLKAEKTLISSYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTE
                     KNGYPPEKVDVATGKAQGKGPVGFSAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNY
                     VLTLFGQGWDQHRFRFSTKGELLPDWGQECANSH"
     gene            complement(19015..21345)
                     /gene="bcsB"
                     /locus_tag="JNZ57_001451"
     CDS             complement(19015..21345)
                     /gene="bcsB"
                     /locus_tag="JNZ57_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis cyclic di-GMP-binding
                     regulatory protein BcsB"
                     /protein_id="HAY8827722.1"
                     /translation="MKRKLFWICAVAMGMSAFPSFMTQATPATQPLINAEPAVAAQTE
                     QNPQVGQVMPGVQGADAPVVAQNGPSRDVKLTFAQIAPPPGSMVLRGINPNGSIEFGM
                     RSDEVVTKAMLNLEYMPSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQMPIN
                     PLFITDFNRVRLEFVGHYQDVCENPASTTLWLDVGRSSGLDLTYQTLNVKNDLSHFPV
                     PFFDPRDNRTNTLPMVFAGAPDVGLQQASAIVASWFGSRSGWRGQNFPVLYNQLPDRN
                     AIVFATNDKRPDFLRDHPAVKAPVIEMINHPQNPYVKLLVVFGRDDKDLLQAAKGIAQ
                     GNILFRGESVVVNEVKPLLPRKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAAI
                     NVSLNLPPDLYLMRSTGIDMDINYRYTMPPVKDSSRMDISLNNQFLQSFNLSSKQEAN
                     RLLLRIPVLQGLLDGKTDVSIPALKLGATNQLRFDFEYMNPMPGGSVDNCITFQPVQN
                     HVVIGDDSTIDFSKYYHFIPMPDLRAFANAGFPFSRMADLSQTITVMPKAPNEAQMET
                     LLNTVGFIGAQTGFPAINLTVTDDGSTIQGKDADIMIIGGIPDKLKDDKQIDLLVQAT
                     ESWVKTPMRQTPFPGIVPDESDRAAETRSTLTSSGAMAAVIGFQSPYNDQRSVIALLA
                     DSPRGYEMLNDAVNDSGKRATMFGSVAVIRESGINSLRVGDVYYVGHLPWFERVWYAL
                     ANHPILLAAISVILLAWILWRLLRIISRRRLNPDNE"
     gene            complement(21356..23974)
                     /gene="bcsA"
                     /locus_tag="JNZ57_001452"
     CDS             complement(21356..23974)
                     /gene="bcsA"
                     /locus_tag="JNZ57_001452"
                     /EC_number="2.4.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417990.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-forming cellulose synthase catalytic
                     subunit"
                     /protein_id="HAY8827723.1"
                     /translation="MSILTRWLLIPPVNARLIGRYRDYRRHGASAFSATLGCFWMILA
                     WIFIPLEHPRWQRIRAEHKNLYPHINASRPRPLDPVRYLIQTCWLLIGTSRKETPKPR
                     RRAFSGLQNIRGRYHQWMNELPERVSHKTQHLDEKKELGHLSAGARRLILGIIVTFSL
                     ILALICVTQPFNPLAQFIFLMLLWGVALIVRRMPGRFSALMLIVLSLTVSCRYIWWRY
                     TSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVPLPKDMSLWPSVD
                     IFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQNVGVKYIART
                     THEHAKAGNINNALKYAKGEFVSIFDCDHVPTRSFLQMTMGWFLKEKQLAMMQTPHHI
                     FSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEIGGIA
                     VETVTEDAHTSLRLHCRGYTSAYMRIPQAAGLATESLSAHIGQRIRWARGMVQIFRLD
                     NPLTGKGLKFAQRLCYVNAMFHFLSGIPRLIFLTAPLAFLLLHAYIIYAPALMIALFV
                     LSHMIHASLTNSKIQGKYRHSFWSEIYETVLAWYIAPPTLVALINPHKGKFNVTAKGG
                     LVEEEYVDWVISRPYIFLVLLNLVGVAVGIWRYFYGPPTEMLTVVVSMVWVFYNLIVL
                     GGAVAVSVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQIL
                     EGQKVNLLLKRGQQEYVFPTQVARVMGNEVGLKLMPLTTQQHIDFVQCTFARADTWAL
                     WQDSYPEDKPLESLLDILKLGFRGYRHLAEFAPSSVKGIFRVLTSLVSWVVSFILRRP
                     ERSETAQPSDQALAQQ"
     gene            complement(23971..24723)
                     /gene="bcsQ"
                     /locus_tag="JNZ57_001453"
     CDS             complement(23971..24723)
                     /gene="bcsQ"
                     /locus_tag="JNZ57_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsQ"
                     /protein_id="HAY8827724.1"
                     /translation="MAVLGLQGVRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLL
                     RLSFNVDFTHRQGWARAMLDGQDWRDAGLRYTSQLDLLPFGQLSIEEQENPQHWQTRL
                     SDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQ
                     ALPDGAHILINDFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAMAECLAAKQPVGEY
                     RSDALAAEEILTLANWCLLNYSGLKTPVGSAS"
     gene            complement(24735..24923)
                     /locus_tag="JNZ57_001454"
     CDS             complement(24735..24923)
                     /locus_tag="JNZ57_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827725.1"
                     /translation="MNNNEPDTLPDPAIGYIFQNDIVALKQVFSLPDIDYADISQREQ
                     LAAALKRWPLLAEFAQQK"
BASE COUNT         5847 a         7012 c         6365 g         5886 t
ORIGIN      
        1 caggaggaga tatttaacat cattgccgcc tgggtgcgat ttttcacttc cagacggcga
       61 tacagggatt ccagatgcgc ttttaccgtt ccggtactga tattcagcgc tctgccgatc
      121 tccttatttg actcgcccgc cgctaacatg gttaaaatct cccgctggcg ggcgcttaac
      181 gatttgagat ctttaatgtc cttttccggc gtcgtccgcc agtctccagg cagaaacatc
      241 atccccatcg ccgcactatt taccgccaac gcaaatgtct cgacggttga atcacgaggc
      301 acaatggcca gcacattaaa atggataact tcctgtaacc accgtttatt gcaatccgtc
      361 gccgtgatta acaccttaac ctcaggaaac tgcaccacgg ttttttgcag caaccagtag
      421 caaaactcac catcctgatc gccatcgagc ataactaagg cttcagggta actttccagc
      481 ttttgccata actcgtctgc ctgactggcc ccctgaatac tcacccctgg aatacgctgc
      541 tgtaaactga ttttcattcc atgaataaat attgactgcc tgtcaaacat gactatttgc
      601 ataactgaat ctccacctga atatgttaaa aagacttaag tagtggaagg gtattacccg
      661 cgagaaaaaa taagaattcg ccatttggcg gtggccattc tacagagatg acgcgtagaa
      721 aatagttacc gatataaata gttacagcta aacgcctgaa attacatgtc gagggcacta
      781 tttaaaacaa ttttgaggat ttccttatat tggtggttag tacgcatgca attaaaaatg
      841 aaattccgcg actacaagcc aaaataacaa atggcaatga gacaaaaata agcacaaata
      901 gccaatacgt cctctattca ctttaaaggg aatcactgaa aaatacgctc tgtttaaggg
      961 gattcacctt tctcataaag ctattccgcc cttttcctgc tgagaaatcg ccacattcgt
     1021 catgacaaca ttgtgaaacc cggcattaga ggttagaaaa aacaataaac aatgcgatat
     1081 gcgcgttact gtttcgctgt gaacagcaat cggtcaaaga aatggataaa attcacgcaa
     1141 tgcagttgtt catcaaagtc gcggagctgg aaagtttttc ccgcgcagcg gatttctttg
     1201 ctttgccaaa gggaagtgtt tcgcgccaga tacaggcact ggaacatcaa cttggcaccc
     1261 agcttctcca gcgcaccacg cgacgggtca aactcacgcc agaaggcatg acctattatc
     1321 aacgggcaaa agatgtgttg agtaatctca acgaactgga cggtctgttt caacaggatg
     1381 ccaccagtat cagcggtaaa ttacgcatcg acatcccgcc aggaatcgcg aaaaacctgt
     1441 tactgccgcg cctgtcggaa tttctctatc tgcatccggg aattgagctg gaactgagta
     1501 gccatgaccg tccggtagat attcttcatg atggttttga ttgcgtgata cgcactggcg
     1561 cgttaccgga agatggcgtt atcgcccgtc ccctcggcaa actgaccatg gtcaactgtg
     1621 ccagtccgca ctatctgacg cgctttggtt atccgcaaag ccccgatgat ctgacttcac
     1681 acgcaatagt gcgttataca ccgcacctgg gtgtacatcc gttaggtttt gaggttgcca
     1741 gcgttaatgg cgtccagtgg tttaagtctg gcggcatgtt gacggtaaat agtagcgaaa
     1801 actatctcgc cgccggtctt gccggtctgg ggattattca gatcccgcgc attgccgtgc
     1861 gcgaagccct gcgtgccggg cggcttattg aagtattacc tggctaccgt gccgagccgc
     1921 tctccctttc gctggtttac ccgcagcgtc gggagctttc ccggcgtgta aacctgttta
     1981 tgcagtggct ggctggcgta atgaaagagc acctggactg accgactata ctttttaaga
     2041 atgaccacga cagaaggaca aaagagcgga tgacgcagga aaacgagatc aaacgtccca
     2101 cccaggatct ggagcacgag ccgattaagc agttggataa tagcgagaaa ggcggcaaag
     2161 ttagccaggc gctggaaacc gtcaccacca ctgccgaaaa agtccaacgc caaccggtta
     2221 ttgcgcacct gattcgcgcg acagaacgct ttaacgatcg gctgggtaac cagtttggtg
     2281 cggctatcac ctatttctca tttttgtcga tgatcccgat tttgatggtg tcgtttgccg
     2341 cagggggctt tgtgctggcc tcccatccga tgttgctaca ggatatcttc gacaaaattc
     2401 tgcaaaacat cagcgatccg acactagccg ccacgttgaa aaacaccatc aacaccgccg
     2461 ttcagcagcg tacgactgta gggcttgtcg gcctggcggt ggcactttat tccggcatca
     2521 actggatggg taacctgcgt gaagcgattc gtgcccagtc gcgcgatgtc tgggaacgct
     2581 cgccgcaaga tcaggagaag ttctgggtaa aatatctgcg tgattttatt tcactgattg
     2641 gtttgttgat tgcgctgatt gtgacgcttt cgatcacctc ggttgccggt tcggcgcagc
     2701 aaatgattat tagcgccctg cacctgaaca gcattgagtg gctgaaaccg acgtggcgat
     2761 tgattggcct ggcgatttcc atcttcgcca actatctgct tttcttctgg atcttctggc
     2821 ggttgccgcg ccaccgtccg cgcaaaaaag ccctgattcg cggaacattt ctggctgcta
     2881 ttggttttga agtgattaaa atcgtgatga cctacaccct gccatcgctg atgaaatccc
     2941 cctctggcgc agcatttggt tccgtgctgg ggctgatggc atttttctac ttcttcgccc
     3001 gtttgacgct gttttgcgcg gcgtggattg ccaccgccga atataaagac gacccgcgaa
     3061 tgccagggaa aacgcagcct taaaataggc cggatgcggc gtaaacgcct tatccggcat
     3121 acgattttat tcggcctggc tccccgtagg ccggataaga tgcgccagca tcacatccgg
     3181 ctataatgcg cacataacct cttgaaactc gtccccagag cctcttcagc catctattta
     3241 ggagcaaaca atttcattct aactcataac cccagcatat aaatccagtt ggtaactttt
     3301 atttaacctg aaaccagttt tatccactat ttataaagtt atgtgaagca tttcatagaa
     3361 gaaaaatcac tggcctaaac attatcccct ttttgcctgg tttttgacca ttcccgcgat
     3421 ttgttacaca ttgaaatatc acttttgctg tgcgtaatat ggctattcgt tagccaaaaa
     3481 ataagaaaag attatgcaag caacagccac aacactcgac cacgagcaag aatacacgcc
     3541 gatcaactcg cgtaataaag tccttgtcgc ctctctcatt ggcacagcca ttgagttctt
     3601 cgacttttac atttacgcca ctgcggccgt tattgtgttt ccgcatatct tcttcccgca
     3661 gggcgatcct acggcagcaa cgctacagtc gctcgccacc ttcgccatcg ccttcgtcgc
     3721 gcgccccatt ggctctgccg tttttggtca ttttggcgat cgcgttgggc gtaaagcgac
     3781 gctggtcgcc tcgttgctaa cgatggggat ttcgaccgtg gtgattggtc tgctgccagg
     3841 ctatgccacg attggtattt tcgccccgct gctgctggcg ctggctcgat ttggtcaggg
     3901 tctgggctta ggtggtgaat ggggcggcgc ggcgctgctg gcgactgaaa acgccccacc
     3961 gcgcaaacgt gcattgtacg gctccttccc gcagctgggc gcaccgattg gcttcttctt
     4021 tgccaacggc actttcttgc tgctttcctg gctactgacc gacgagcagt ttatgagctg
     4081 gggctggcgt gtgccattta tcttctcggc ggtgctggtc attatcggcc tgtatgttcg
     4141 cgtgtcgctg catgagtcgc cggtgtttga gaaagtcgct aaagcgaaaa aacaggtgaa
     4201 gatcccgctg ggtacgctgc tgaccaaaca tgttcgcgta accgtactgg gtacgttcat
     4261 tatgctggca acctatacgc tgttttacat catgacggtc tactctatga cctttagtac
     4321 cgccgccgcg ccagttgggc ttggcctgcc gcgtaacgaa gtgttgtgga tgttgatgat
     4381 ggcagttatt ggttttggcg tgatggtgcc agtcgctgga ttactggctg atgcctttgg
     4441 tcgccgtaaa agcatggtaa tcatcaccac gctgatcatc ctattcgcgc tattcgcctt
     4501 taaccctttg ctcggttctg gcaacccgat tctggttttt gccttcctgc tgctggggtt
     4561 aagtctgatg gggctgacct tcggtccgat gggcgcgctg ttaccagagc tgttcccgac
     4621 agaagtgcgt tacaccggag catcgttctc ttacaacgta tcgtcgattc tcggggcttc
     4681 cgttgcgccg tatatcgcag cctggttgca gactaactac gggttaggtg cggtggggtt
     4741 atatctggcg gcgatggctg gcttgacgtt aatcgccctg ctgctgaccc atgagacgcg
     4801 acatcagtcg ttgtaagtat cgtgtgggca gccaccctca ccccagccct ctccctgaaa
     4861 gggagaggga gaaaagcgga gcgagatgtt atatcgcgaa cataacagcc ctcccccaga
     4921 aagtgaacgg aaaagcggta ctcgttgttt caacacgcac aaaacagtcc cctcgcccct
     4981 ttggggagag gattagggtg aggggaacac gctgctcccg aactcaccag caaacacaat
     5041 ccaacctcat cacttcttca tctgcgacaa tatcgtccga cactgattag cctccccttc
     5101 ggaaggtgag atcagtgcca ataacgccgc cgccggtgtt accagcgttg ccagtgccgc
     5161 cgcaacggca ccacgggcaa tcagcggtcc ggctttcacc ccagcctgcg gatttttaaa
     5221 cgtcccacgc acatacagcg gcgaacgcag tgtgataatc cgaatccctt tactctccgg
     5281 atcaatagtc aaatccagct gttccgaagc aaaacttgcc gtgccggtaa cattaatcaa
     5341 cgcgttctca gtatcgaaag caaaaatctg cgggcgcgct acgccgttgg caatattcag
     5401 attcgccgcc gcgcagttca cccgcacctc atcgtcacca aatatcgcac cgacaatgta
     5461 gttgccgaca ttcagcccaa caatctccat caggttgcgg ctcaccagcc cgtcattcat
     5521 caacagtttc aggttgccgt tactgttgcc taaaagcgcc gccaccgagt taccgctacc
     5581 gcgtagttcc gcgtcaccgt tcatttcccc cagcgtcttc tgcatcagtt ccacatcggg
     5641 catcagttct ttcagtttca gtcgacgagc ctgaatatct gcccgcccct gcatcggctt
     5701 tttatcgcct tccagatgga tattcgccgc aatgctgccg cccgccatgc caaatttcag
     5761 cggttgcagg cgcaggtcag catttttgag gatgatatga gtagaaagat cgctaatcgg
     5821 caggctactg ccatgctcga tacgtcggcc tttgaagcga acatcggcat ccataacgtc
     5881 ccatttatcg gtttcgaagc ggtcataagg cagcactttg cccgcaggct gaacgctttt
     5941 ttcgcccttc ttctgttcag accgtttcga cttttctgcc cctttccccg aatcaacgcc
     6001 aatcaacggt cccaggtccg ccagccgcaa ttgccgcgac tcgacatcac cttccagttt
     6061 tggtcgtggc tttccggtgg tgtagaccag agaaccgtgg atatcgctat cgccaattcg
     6121 tccattaaaa ccgcgataat caaagaccga cgatttttca gtgtcgattt tcgctaccag
     6181 ccgaccatcc gtttcaaacg gcggggtatc gggcagcaga acgcccgtca gttcatagag
     6241 atcacccagt gaatcgccag aaaatttaag ccgtaaatcg acaccgccca tcttcattgg
     6301 gtcattcacg acgccatcaa aagcaacacg ggtattacct gaacggaaat cagcctgtac
     6361 cggaaacggc gtcccttcgc cacgcagcgc cagcataccg cctatttttc ccgtacccgt
     6421 gagcggttca ccgttataac gtccctgcgc cttcaggcca aaaacgtaat cgcccacctt
     6481 ttctttatcc gctttacctt tcgatccagt aacttcgctg aacggcagcg gcttgcctaa
     6541 cggatcaaca aaaatttcca gatccgcttt gcttactttg tcatcaatgg cgatccgccc
     6601 ttgatcgaaa agaatattat ccagccgaaa cgaccatgcc gacggctttg cattcgcgtc
     6661 tttgttatca tcgttggcga gattaaacgt ccagttattg ttcttttcgg agaggcgaat
     6721 caggcgcgcg tcgggctttt cgagcttgat ccacggcagc cagaccgttt tggtcagcag
     6781 cgccagcggt gccagcgttg cctctactcg cggcaaatgc accatcgtga cttcgggaat
     6841 atccggtgga ttgccaagaa tgatgtcttc tgcatgtaca tgaggccacg gcacccagct
     6901 gcgccagcca gtttcttgtt tttgccgctc ccacaccacg cccagatcgc cacggatagc
     6961 gaacggacga ttcaactccg cagagacttt ctggttgatg gtcggtttga gtcgattcca
     7021 gtcaaaagtt gcaatcaaaa tgatcgccac gacaatcaac aacaagaaag cccctgaaat
     7081 cgcagcggtt attttgcctg ccttgctcat cgttcgcttc ctcatattct tcctgtgcca
     7141 gtcctaaaga tagtccagcc aggcggaaaa tgaggcagct tatagcgcca gaaccgccgt
     7201 attcagcgtt tctatcggtg ccgggcgtga aagaaaccag ccttgtgcgg cgaatgcggg
     7261 cgagttctgt acatcacgcc actcttccgg cgtttctacg ccctcaacaa tcaccccgcg
     7321 acaatagcga ttcattagat gtaaaagctg agaaaagagt gtgcgtcctt ccggcgactg
     7381 acgcagcatc acaaacagtt ctcgcgcgat tttgatgtag tcataacgca cttcacttag
     7441 tgcagagaaa tttgccatcc cggtaccaaa atcacccagc cacagcgggc caaattcaca
     7501 catcgaggca aaggttgaat ctttcggcag acggatatgc tccaccagtt cgaaacgcag
     7561 ccagggaaga cgctcaattt ggcgcaggat ttttggttgc tgacgcaggg cgatgagcgt
     7621 agggccatca atattgaccg atgccagcag gccgtgctct ataaagaagt cggctttttg
     7681 cgccagcaaa tcaatctgct ctttcacaac ctccatccga tggctgacgg tgatttcagt
     7741 aaaatagcga tccggcggca ggcgttgcga agggttcaag ggatgcgtga ccaccgttaa
     7801 tagctccacg gccattaacc gcccgcatgt ttgatagatc ggctgccagg tgtaagcacg
     7861 ctcacactgc aaccaaaaac gccgttcctg caagctctcg atgcttgctt cagggttgct
     7921 tattcgctgg ataacctgcc ttatcatcaa agatgtcctg tgtttaaaag tgatgctgcc
     7981 cggactcgac aaagattatc ggcgcgtaag ggcagaactt taccgcctgg ccggggtaaa
     8041 tttcctcact ccacaacgga atctttcagg aatacgttct ggctcaaaaa aataatggaa
     8101 cactgtttta atattgttga ccagcaaacc accacagcgc aaactaacgc taatttttta
     8161 cagatcaggt tcacgactat gtccaaaaag attgccgtga ttggcgaatg catgattgag
     8221 ctttccgaga aaggcgcgga cgttaagcgc ggtttcggcg gcgataccct gaacacttcc
     8281 gtctatatcg cccgtcaggt cgatcctgcg gcattaaccg ttcattacgt aacggcgctg
     8341 ggaacggaca gttttagcca gcagatgctg gacgcctggc acggcgagaa cgttgatatt
     8401 tccctgaccc aacggatgga aaaccgtctg ccgggccttt actacattga aaccgacagc
     8461 accggcgagc gtacgttcta ctactggcgg aacgaagccg ccgccaaatt ctggctggag
     8521 agtgagccgt ctgcggcgat ttgcgaagag ctggcgaatt tcgattatct ctacctgagc
     8581 gggattagcc tggcgatctt aagcccgacc agccgcgaaa agctgctttc cctgctgcgc
     8641 gaatgccgcg ccaacggcgg aaaagtgatt ttcgacaata actatcgtcc gcgcctgtgg
     8701 gccagcaaag aagagacaca gcaggtgtac caacaaatgc tggaatgcac ggatatcgcc
     8761 ttcctgacgc tggacgatga agacgcgctg tggggtcaac agccggtgga agacgtcatt
     8821 gcgcgcaccc ataacgcggg cgtgaaagaa gtggtggtga aacgcggggc ggattcttgc
     8881 ctggtgtcca ttgctggcga agggttagtg gatgttccgg cggtgaaact gccgaaagaa
     8941 aaagtgatcg ataccaccgc agctggcgac tctttcagcg ccggttatct ggcggtacgt
     9001 ttgacgggcg gcagtgcgga aaacgcggcg aaacgcgggc acctgaccgc aagtaccgtt
     9061 attcagtatc gcggcgcgat tatcccgcgt gaggcgatgc cagcgtaaac gcagcatatg
     9121 caaaaggctg gataaagtgt tacccctcta tccagctcat ccataaatac ctgatggttg
     9181 tgctaactca tcaccatcag gcattactgt gcaggtggaa tatccgtcac ttcaggatgt
     9241 acgtcatccg tggcgacaga ggtggcggca gcagcagtcg atggggccat gatttgatcc
     9301 caggccgcct gcaacgcttt catgttaaat tccggctcgc ctttcggctg cagcagtatt
     9361 aacgccatat cattcgacaa ctgctgacgc agatcctgat ttaacatctc caccgtcagg
     9421 ctgttaagga aatcctgccg cagtttctga tactgctccg gcgcgatatc gacgacctga
     9481 ttttgcaacg aacgcatccg ctgacccatc agaatatcgg tatcagcccg cgcataggcg
     9541 gcaaacagtt tctgcagctc cagtttcttt tgcgccacta acgcattgaa ctcttcttcc
     9601 ggcagacctt tatcgcgaac cttcgccagt tcacgcgcca ccagattaag gttgctgttc
     9661 agcttgtcgt ttggtgattc gatgttgatg gcacactgcg cacgcagata cagcacacgg
     9721 cagtcaaatc caagaccgat gtctttgctg ttactggcgc ttaacgcttg ctgaacatgc
     9781 cagaacagcg cctcgcgggc taggtccgca cgccagtagc gcagcagtgc ggctgcttca
     9841 cgaatcggct gccacggcgt atcccacatg atagataacc ggtcctgacg caccgcgtca
     9901 gtcataatac tcaccgcttc cgcacgcagc ggagaaagcg tcggcaccgg agctggcgtt
     9961 tcacgtttgc ctttcagttc gccaaacgtt ttgttgattt ggtcgacaac cgagcgcgca
    10021 tccacgtttc ccaccaccag tagcgtcatt gcatccgggg tgtaccattt ctgatagaaa
    10081 tctttaattt tttccgcttc aacgggttgt ttcagcggat cggcaggatc gtgacctaac
    10141 aaggttgacc ctttcagacg atagcgccac cagccctctt tagtatcggc aggccaggtt
    10201 gccaccatgt cctgactttg cagcgcgtgg ttgatggttt ctggtgtgat ggtcaatttg
    10261 ccagtggcat ttgccagata agagagcgct tctttcagca aatcgttacg gttattgggc
    10321 aaactcagat taaacagcgt ggtgtcataa gagacaatta ccggcggcat cgggcgttta
    10381 gggtcgatcc cctgctgcca caatgaacgc gcctgtgctg cgtcaaggcc accgctttgc
    10441 gttagcgcaa tacgagggat ggcgtgactg taaccgctct gttgtgtact ttcggcgagc
    10501 gaaccggtat taaccagcag gcgaatttca acacgatcgc tgggacgctg gggggtggtc
    10561 agcacttgcc actgtaaacc gttggaaagc gtcccctgtt gccatgctgg atcaggctgg
    10621 agcgcatctg cctgcacata gccagcagtg gccatcatca gcaaaccgcc cgctaaaagt
    10681 cgaatttttg tgccctgcat gtgaacccct gatcaactat cctggtaata aaaaaactgc
    10741 ccgttgtcag tcagtctaaa tgacgttaaa aacacttcgt gttagaccgc aagaacatga
    10801 aaatgtcacg gaagaagtga aataaacctg aactcaccca ggtggtaagt tcaggcacag
    10861 gggtcaatta tgcgcaaaca cccgcactcg gggaagggag tgcgggcata agtggtgaga
    10921 ttaagaggat aattcgtgcg ttttgccatc cggcgcacga ttattcagca catcgtccag
    10981 ttttttgtgg tccagttctt tcacccactt agcaacgaca atggtcgcta cgccgttacc
    11041 gaccaggtta gtcagcgcac gagcttctga cataaagcgg tcgataccga ggatcagcgc
    11101 cagacccgct accggcaaat ggcccaccgc agagagcgtc gccgccagca cgataaagcc
    11161 actacccgtt acccctgccg cccctttaga agaaagcagc aacacgatta acagcgtgat
    11221 ttggtggacg atatccatct gactgttagt ggcctgggcg ataaacaccg ccgccattgt
    11281 caggtatatc gatgtgccat caaggttaaa cgagtagcct gtcgggatga ccagccccac
    11341 caccgatttg cggcagccga gtttctccat cttgtcgagc atacgcggca gcgccgactc
    11401 ggaagatgaa gtccccagta caatcagcag ttcttcacgg atgtagcgga taaatttgaa
    11461 gatactgaaa ccagtcgctt tagcgattga acccaatacc agcaccacaa acaggataca
    11521 ggtaatatag aaacagataa tcagctgccc cagttgcacc agtgtgccga cgccgtattt
    11581 accgatggta aacgccattg ccccgaacgc accaataggt gccagacgca tgatcatatt
    11641 gatgatgccg aagatgacct gcgagaaact ttcgatcacg ttaaaaatca gttggccttt
    11701 gctgcccaga cggtggagcg caaaaccaaa cagtacggca aacagcagca cctgcagaat
    11761 gttaccgctg gcaaatgcgc caatgacgct cgccgggatg acatccataa tgaaggcgac
    11821 aatgccctgg tctttcgcct gatcggcgta aaccgctacc gctttcgcat caagcgttgc
    11881 cggatcgacg ttcattccgg caccaggctg cacgacgtta acgatgataa gaccaataat
    11941 cagcgcgatg gtactgacaa tttcaaagta aagcagtgcg actgcgccgg tacgaccgac
    12001 cgccttcatg ctttccatgc ccgcaatgcc cgttacgacg gtacaaaaga tgacaggagc
    12061 gatgatcatc ttaatgagct taacgaagcc gtcgccaagc ggtttcattt gctcgcctat
    12121 ttcaggatag aaatggccaa ggagaatacc aatggctatc gctgtcagga cctgaaagta
    12181 aaggctttta aacagagagg ttttcatagg gtgtccttta gtaaaactac aggtcttgta
    12241 aggttatgag gtacctgcgg ccttaaaata acacccagac aacatcacag aaatgtacct
    12301 ggatcataat tgaaacaaaa aggttaaaaa gtttgagctg gctcgcacaa accagcactt
    12361 tttaaagttt tgtaatcagt ttggggtagc tacttttctt ccaggtaact ctcttcgaag
    12421 atttcaatag ggagtgggcg agcaaaaagg aagccctggg caataccaac gcccgctttt
    12481 gccagccagt cgcgttgtgc ttcagtctcc acgccttcgg caatcatttg taagttcagg
    12541 ctctgcgcca gcatgataat tgcagcaatc atgctgctat cttccggcaa gccttcaaca
    12601 aacattttgt cgattttcag tacgtcgatt ggcaacgatt tcatatgctg cagctgacgc
    12661 agccctgcgt agcccatgcc gaaatcatcc agcgccaccc gaactccggc attgcgcagc
    12721 ggacggagga ttgccaccgc agcatgaggg tcgtcaatac gtcggctttc tgtcacttcc
    12781 agaatcagtg ttcccggctg aatgcgatag cgggttaaca gttccagcat atccgccacc
    12841 atatttgggt gcatcagttg cagcgcagag aggtttaccg acaagggcag cataatgccg
    12901 cgctcttgcc aggctgcaag caatcgacag gactcttcca gcacccagtg accgacggta
    12961 accatcagcc cacagcactc aatgcgatcg attaagccat ccggcaggtc ccaactgcca
    13021 tccggttgct ggatacgcag taacacttcc gcactgacca gtttaccgct ggtcatctcg
    13081 acctgtggct gtaaccaaat agcaaactga tgattttcca gtgcattaag gatatcgctc
    13141 tcttccgtca accgcttctg ggcggcttcc atctgctgcg gatcaaagaa ctgaatctga
    13201 ttcttgcctt tatggcgagc ggtaaatgcc gcagaaatag cgcgactgta aagctgttcg
    13261 gcggtgagat cgccgtagaa catcgccacg ccaatgctac agtgcggacg gagttgaata
    13321 cgttcaatcg gcaggcgctc gctcatgata gtgagcactt gctgacctaa ggtgattgcg
    13381 tgccacggtt cctgtacacc gttggcaatg acagcaaagt cataaccgct aatctgcgcg
    13441 aggatcatac gtggcgacag taccgatttg agtttttcca ccagcgtcag cagcagaatt
    13501 tctcgttgcg cctctttcag cacgcccgca gtatcacgca gggtttcaca ggtgatgatc
    13561 atcagcgcgg tggtttgttt acgcgcgaca acctgctcca gcatctccat cagcaaggct
    13621 ttgttcggca aatccgacac cgggaagcgc atcgcatttt cgttctgttc ttcataatgg
    13681 cgctgcagca attgctggtt gaggttgtaa ctgcgcacca acataccgat ttcatcgtcc
    13741 tgatgcagac gcggtaatgc cagttggtga ccaacaagct cctgggctgg gatggcgtta
    13801 agttcgcgag caatattgcg taacggatgc aaaatcaggc ggttaatgca ccagctgatg
    13861 gcgacggtca ggataagcga caaaagtaag taaatggtca ctaacgttga gagggtgctc
    13921 atcacgaact tatacatacg gaaggaatcc gcctgtagta ccagataggc aattggctgc
    13981 gggtttgccg gacgttcgag cgagtaaacg cccagcgaga tttgaaccgg tagctcaaac
    14041 aggcgagtaa ccattaccgg caccgggcgc tctggaataa aacttttacg cagcgcctgg
    14101 aactggttag gcagcactac atcggcacgg ctgaccacgc ctgccggttt aatgctggca
    14161 agaatagctt ccgcttcggg aatatcgcct ttcaaaatag ctgaagataa gggttcgcgt
    14221 acagagcgag caatgctttc cagttgcgta gccgtgttat agcgattctg ctggaccaga
    14281 tggaacagca aaacggtgca aaaaataaaa acgaacacca ggacaacggc tgccaccatt
    14341 gccatctgct tgattgttaa cgagcgactt acgcgcaaat tgtctccccc cggaaatccc
    14401 agattgccgc ccgagtatac ccgatcgcag cggcattaag agaggcgcta tctgaaaact
    14461 taccagtcgg cgtaaggtat cagcggctgc ggcggtaaat ccatgtcacc ctgccatccg
    14521 gcggcggaat aacgtacgta gagcaggaaa tggctgggtg cgtaatcttt cgcctgctgg
    14581 atatcaattg ccgtgccaac aaaccagttg gaagtaacac gtcgttcaag taatgcccgc
    14641 gccgtgtagc cgaagccctg actgctgccg ccatcgttgg attgccgcgc agcttcttcc
    14701 tgccagtcgg tcgggatcag attcatcagc ggataacgca gcatggtttt ggtgcgtgaa
    14761 tgcgaccacg agccagacgc ccccagctcc cacgaccagt tttccgtgcg ctcccgccac
    14821 atcaccggta tagcaaacga caggtattcc tgcggactgt agtaaccgcc ctgaccgagt
    14881 gagtagccac tcagatcttt gtcgtaatgc cagatcatgt tgttcaggcc gattgtgacg
    14941 cggcgattgt tctggttaat gaccttatag taatagcccg tcatccagcg cacgcgccag
    15001 ttatcttcga catttttacc ggttaactgg tcgccactaa gcgatgccct gacgccgttt
    15061 gcttcacctt tatcgtagct cagacttagc cccacaccgt cggcacgtac gccaccccat
    15121 tttttcccgg tattgctcgg ggagtctttt tgcccaccaa aggccagcaa agaactggag
    15181 atgggccgac ggtgggcgtt aacggtgtaa cccagcggcc cgatatcatc gctgtaactg
    15241 atgccgccga ccacatccac cacgttgaag cccatcggcg tggtaccgat atcccagctc
    15301 cagacgtcat ttcgccagcc gaccgccacg ctggcaccgg agtccgactg gctgcggttg
    15361 ccactacagt cctgtaatgt acaggtgccc cagttgtcat cccatttgcc atcggcatta
    15421 gtggagaaac tgccgacgtt catattgacg aaatcactgc gaaagaacat ccgcccgtca
    15481 gaatacggcg catccacctg caacatggta gtgtgcgctt tcagatcgga gtaaccaccg
    15541 gtgccgctcg aaccccagta atcgtgctcg agggtgacgt taagatcctg ctggcgatag
    15601 aggcccgccg catcgctgcg cacgccgcgt ttcagccagt catctttctc gtcgttacgg
    15661 gtcagtcggg tgaatgtgtc gttatcctgc ggacgcgtcg tagtcacacc ggatgcgacc
    15721 atggcgtctt tgtaggtttc cagcgcctgc tttggatcgc ccgcctgcgc ttcaaacttc
    15781 gcaccatcgc gctttccatc gacggtggct gagattttgc ctgcaggatc aacttattaa
    15841 acgtctgctg cgccgctgcg gtatctccaa gctgcgcctg cgccagcgcc acgcgccgct
    15901 gtgtgttcag cgaggcgtta tcggtagcgg gcagtttcgc cagctggcta cgtgccgccg
    15961 ctgtgtcacc ggcagcaata tccacttccg tcagccccag aatggcatcg gcgttagttg
    16021 gctccagcgt caggacattc tgatatgcag cgcgggcggc ggtgtaatca cgtcgctgct
    16081 gcgcccagtc agccagcgtg aggtcaatac gcgtggaagg tggttgctga cgcagcatcg
    16141 cttctgcttc agcttctttg ccgctttctc gcaggcgatt agcggtttcc agcacctgat
    16201 cgctttgcag tcgattaacc agctcctgaa tattgctgtt ccactgcgcg cgcggcaggc
    16261 tgttgatatg cgccagcgcc gctctgtcct ggtcatgacc agagaggtac agcccgtaag
    16321 cgtaaacctg ctccgggtcg ttcggcttct gctgcgccag attgcgcatt aacgtatcgg
    16381 cctggctgcg ttgtccggcc tgccagagat cctgcgaaag tcggtaagta atccatacgc
    16441 tgccggggtc cagcgccagt cgttgccgct gaagtgctgc cgcctgcgcc catttgccct
    16501 ggttttccag tgcctctgcc tgctgtgcca gacggtcgtt ttgcaggctg cgttcgatat
    16561 catcaatgct acgccgctga ctggcagaga gcgaggcgat aaacgcttca gctttttctg
    16621 gcgattgctg gcggtaaata tttgccagcc cgcgcacggc gttagtgttg ccgctgtcca
    16681 tacgcaaggt ctgctgataa taacgttcgg cggcgggata atcttttcgc gccatcgcca
    16741 catcgcccag ccccagcact gcataactgt cggtgttatc gacattacgc gcctgctgga
    16801 acaggcgttc tgcccggtca ggattattgg ctttcagcgc agcatcgccc tgctggatcg
    16861 ccagccagta gcggtttact ttcagcagac tgttccattt gtcgttgttg ctgctgtgcg
    16921 ggtccagtgc gagggctttt tccagattcg ccactgcatt ggcgcgatcg cctttctgag
    16981 aatacgcctg gcccagcgcc cccagagctt cactgtcttt cgggttcgcc cgcaccgcct
    17041 gttgtagttc gggaatggct ttacccgcca taccagagtc caccgccgct aaaccttgcg
    17101 cacgagcgcg gaaagcagga tcggccagct gtttttgctg ttctgccagt tgcgattgcg
    17161 cagccgccac gctatcgcca tcactaaaga tcgagagata ttttttcagc gccgacacac
    17221 tggcatcact gacgggcatg tctttaatct gcccgtacca gattttagag gccccttcgc
    17281 gcccggcgtt cgattttgcc atctgttcca ggacggcaaa accttcgtca cggcgatcgc
    17341 tactaaacag caatagcgcc agattgtttt gcaggcccgt attgcccggt gcatccgcat
    17401 tgatgcgttt taactgatta atcgcttcgc cacggcgagc cggaattttc gccaccgtac
    17461 tccagtactc gacagcaatg tcaccttccg gcggcgcacc gttgaacagt ttgttgtaac
    17521 tcgccacagc ttcttctgca tgaccggtcg tcgcctgcaa tcgtgcctgt tgcagtacct
    17581 gacgaccatc cggcgtggaa agtagcatcg tagtccgcga cgatttatac gcatttgaac
    17641 tcggcgctaa ctgcgacagc cgatcgagct gtttttgcgc gccatcaata tcgccctgac
    17701 gtaacaaaga acggaaacgg gcggcaacga cgtccgggtt attcggatca ataagttcca
    17761 gccgatataa cgactgttgc accagatctt cacgatgggt cgcttcgcct aaccgaactt
    17821 gctccagcaa ctgttgctga gcggttggtg ctgcctcgac catcggcatg acggacagac
    17881 cgagggaaag cgtgaatatg tttagtgtga atttgcgcat tcctggcccc agtcaggtaa
    17941 taactcacct tttgtcgaga agcggaaacg gtgttgatcc cagccttgtc caaacagggt
    18001 cagcacatag ttgtaatagg catcgctgcc gggaaagtta tcggccacgc gctggcgctg
    18061 aacggcctgc gcatcgcggt tttgtaaaaa gggcagcatg gcggcagaaa aaccgactgg
    18121 tcctttaccc tgcgctttcc ccgtagccac atccactttt tccggcggat aaccgttttt
    18181 ctcagtgaat gtcgccatcg gtttaaaccg gttgagcatc cgcgctttct gcggatcgct
    18241 gtcaggcatc atgcctaccc acatgtaaac gcggatggcg tcgtagctgc tgatcaatgt
    18301 tttttcggct tttagctgcc agcctttgtc tttctcataa cgcacccagt ctggcgaaaa
    18361 gcctttcggg gcggtttcca gcaataaacg ttgattggtt tcgcgcagcg tagtccacgg
    18421 cgcgccaaag cgggtgaaat actgcgccag cgtcggcggc aggtagctgg ggttaaaacg
    18481 ccagctgtta tcctcagcaa aacccacttt gcccggtaac aacatggaac ccagcccagg
    18541 caccgtcacc acttcctccc gcgcgatacg ttttagcaac gcgctgccga tgtcggtata
    18601 acgctgctct ttccacaaac gccccgcctc cagcaacgac caggccatcc agacatcacc
    18661 atcggaggcc gaattgctgt ccagcacttc ccacttactg ttctctttct tgccccacag
    18721 ccaggcgggc aaacgttctt ttaaagaacc ctgagcgaga ttgttctgcg tccagtcgag
    18781 aatattatcg aaagctgcac ggtcgttagc cgccagggca aagaacatac cgtaactttg
    18841 cccttcggag gtggtgattt tgcgcgcgtc gctggggtcg atgacgcgcc cttcctgact
    18901 gatgtaatcc tttttaaact gctcccaggc aggccaggta caggctgcct gaacactaaa
    18961 ggcagccaac aacagcatcg tcacgattcc actacgcaac acattcatct tcaattactc
    19021 gttatccggg ttaagacgac gacgactaat aattcgcagc agacgccaca gtatccatgc
    19081 cagcaatatc acactgatag ccgccagcag aatcggatgg tttgccagcg cataccacac
    19141 gcgctcgaac cacggcagat gacctacgta ataaacgtcg ccaacacgta ggctgttgat
    19201 accggactcg cggatcaccg cgaccgaacc gaacatggtg gcgcgtttgc cgctatcgtt
    19261 caccgcatcg ttaagcattt cataaccgcg tgggctatct gccaacagcg caatcacgct
    19321 gcgctggtcg ttatacggcg actggaagcc aatcaccgcc gccatcgcac cggaagaggt
    19381 cagcgttgac cgggtttctg ccgcgcgatc gctctcgtcc ggcacaatgc cggggaacgg
    19441 ggtctggcgc atcggtgttt tcacccagct ttcggtcgcc tgcaccaata ggtcgatctg
    19501 cttatcgtct ttcagtttgt ccgggatacc accgatgatc atgatgtcgg catctttgcc
    19561 ctgaatggtg ctgccatcat cggtcaccgt cagattaatc gccgggaagc ccgtctgtgc
    19621 gccgataaaa ccaacagtat tcagcaacgt ttccatctgt gcttcgttag gcgctttcgg
    19681 catcacggtg atggtttgcg acagatccgc catccggctg aatgggaagc ccgcgttagc
    19741 aaaggcgcgt agatccggca tcgggatgaa gtggtaatac ttcgagaagt cgatggtgga
    19801 gtcgtcacca atcaccacat gattctgcac cggctggaag gtaatacagt tatccaccga
    19861 accgcccggc atcgggttca tatactcaaa gtcgaagcgc agctggttgg tcgcgcccag
    19921 tttcagcgcc ggaatagaga catctgtttt gccatccagc aaaccttgta ataccggaat
    19981 ccgcagcagc aggcggttcg cctcctgttt gctgctcagg ttgaaggatt gcaggaactg
    20041 gttattcagg ctgatatcca tccgcgaact gtctttcacc ggcggcatgg tgtagcggta
    20101 attaatatcc atatcaatgc cggtactgcg catcaggtag agatccggcg gcaggtttag
    20161 cgaaacgtta atcgctgctg gctcaagacc gctggattgt aactgttctt cataggtttt
    20221 cagttcgcca aatgtgaccg gacgatcggt acgtacccag ttcggcgcat cgtacggctt
    20281 acgcggtagc agcggtttca cttcattcac taccacgctt tcaccacgga acagaatgtt
    20341 accctgagcg atacctttcg ctgcctgcaa caggtctttg tcgtcacgac caaacaccac
    20401 cagcagtttg acgtaaggat tctgcggatg gttgatcatc tcaatcaccg gggcttttac
    20461 cgccggatga tcgcgcagga agtccggccg tttgtcgttg gttgcaaaga caatggcatt
    20521 acgatccggc agttggttat agagcaccgg gaagttctgc ccacgccagc cagaacgcga
    20581 accaaaccac gaggcgacaa tggcagatgc ttgttgcagc ccaacatccg gcgcacccgc
    20641 aaagaccatc ggcaaggtgt tagtacggtt atcgcgcggg tcaaagaatg gcaccgggaa
    20701 gtgtgacagg tcattcttca cattcagggt ctgataggtc agatccagtc cactgctccg
    20761 cccaacatcc agccaaagcg tggtgctggc cgggttttcg cacacgtcct gataatggcc
    20821 gacaaactcc agccgcacac ggttgaagtc ggtaataaac agtgggttaa tgggcatttg
    20881 cgccagcgtt tttttaccca actgttcttt ggtcactggc agtacgccca tcagctcatc
    20941 attgagataa acctttaact gcgactggac aggcagtaac gatggcgatg gcatgtattc
    21001 gaggttgagc atcgccttcg tcaccacttc atcgctgcgc ataccaaact caatgctgcc
    21061 gttcgggtta atgccacgta gcaccatgct gcccggcggc ggcgcaattt gcgcaaaggt
    21121 cagcttcaca tcacgcgaag gaccgttctg cgccacgact ggcgcatcag cgccctgcac
    21181 gcccggcatc acttgcccca cctgcggatt ttgttccgtc tgggcggcta cagctggctc
    21241 agcattgatc agtggttgcg ttgctggcgt cgcctgcgtc atgaaagagg ggaacgcact
    21301 catccccata gccactgcac aaatccagaa tagttttctt ttcatcgcgt tatcatcatt
    21361 gttgagccaa agcctgatcc gatggttgtg ccgtttcgct ccgctccggg cggcgcagaa
    21421 taaacgatac aacccaggaa accaaagaag tcagcacacg gaatatgccc ttcaccgaag
    21481 aaggcgcaaa ctccgccaga tggcggtagc cacggaagcc gagcttcaga atatccagca
    21541 gactttccag cggcttatct tccgggtagc tgtcctgcca gagcgcccat gtatccgcac
    21601 gggcaaacgt acactgcaca aaatcgatat gttgttgggt ggtgagcggc attaatttca
    21661 gcccaacttc attacccatc acgcgcgcca cctgggtcgg gaagacgtat tcctgctgac
    21721 cgcgtttaag caacagattc actttctgcc cttccagaat ctgcgcctga ccgttgatct
    21781 tgatccccaa accaccgtcg gagaaatcct gaacggtaca cgaaaagagg tgaccatctt
    21841 cgcgggcaat tgccgcgggc atcgtcatct ccacgcggtg cgatcggcgt acctgtttgc
    21901 tttctaccga taccgcaact gcgccgccaa gaacaatcag gttgtagaac acccacacca
    21961 tactgacgac cacggtgagc atctcggttg gcgggccata gaagtagcgc cagatgccga
    22021 ccgcaacacc caccaggttg agcagaacaa ggaagatgta gggccgcgag atcacccagt
    22081 cgacgtactc ttcttccacc agtccacctt tggcggtgac gttaaatttg cctttgtgcg
    22141 ggttaatcag cgccaccagc gtcggtggtg cgatatacca cgccagcacc gtttcgtaga
    22201 tttcactcca gaaagagtgg cgatatttgc cctggatctt cgagttggtc aggctggcat
    22261 ggatcatatg cgacagcacg aacagggcga tcatcaacgc tggcgcatag atgatgtagg
    22321 catgaagcag caggaacgcc agcggcgcag tcaggaagat cagtcgtgga atgcccgaca
    22381 agaagtggaa catggcgttg acgtagcaca gccgctgggc gaatttcagc cctttaccgg
    22441 taagcgggtt atcgagacgg aagatttgca ccatcccgcg tgcccagcga atacgctgac
    22501 cgatatgcgc cgacagactt tcggtcgcca gccccgccgc ctgcggaata cgcatatatg
    22561 cagaggtgta gccacgacag tgcaggcgca gagacgtgtg cgcatcttcg gttaccgttt
    22621 cgacagcaat accgccaatt tcatccaatg gtttgcgacg aattactgca caggaaccgc
    22681 agaagaaagt ggcgtcccac atatcgttgc catcctgcac cagaccatag aacagagtgc
    22741 cttcgttcgg cgttttacga aaacgcccca ggttgcgttc aaacgggtcc ggcgagaaga
    22801 tgtggtgcgg cgtctgcatc atcgccagct gtttctcttt caggaaccag cccatggtca
    22861 tttgcaggaa cgatcgcgtt ggtacgtggt cgcagtcgaa aatcgatacg aactcgcctt
    22921 tggcatattt cagcgcattg ttgatgttgc ccgctttcgc atgttcatga gtggtgcggg
    22981 cgatatattt cacccccacg ttttgcgcaa actggcgaaa ctcttccctg ccgccgtcat
    23041 cgaggatcca gatgttcagt ttgtctttcg gccagtcgat acccagcgaa gcgtaaatgg
    23101 tatttttcac cacgttgaga tcttcgttgt aagtcgggac aaagatatcc accgacggcc
    23161 acagcgacat atctttcggc aatggcaccg gctgacgatt cagcggccat acgacctgga
    23221 agtagccgag caccagcaca atccacgcgt acgtttcagc gaagagcaga ataagcccgc
    23281 acaccaggct gaccggatcg tcccagttca gcgtagaggt gtaacgccac cagatataac
    23341 ggcaagaaac ggtcagcgac agcacaatca acattagcgc cgagaagcgc cccggcatcc
    23401 gccgtacgat cagcgctaca ccccacagca gcatcaggaa gataaactgc gccagcgggt
    23461 taaacggttg agtaacgcag attaacgcca gaatcagcga gaaggtgacg atgataccga
    23521 ggatcaaccg ccgcgccccg gcactcaaat gaccgagctc ttttttctca tcaagatgct
    23581 gtgttttatg gctaacgcgc tcaggcagct cgttcatcca ttgatggtaa cgtccacgaa
    23641 tattctgcag acctgaaaat gcccgcctgc gcggtttcgg cgtttctttg cgcgatgtac
    23701 cgatcagtaa ccagcatgtt tgaatgagat aacggaccgg gtccagcgga cgcggacgcg
    23761 aggcgttgat atgcggatac aggtttttat gttctgcgcg aatacgctgc cagcgcgggt
    23821 gctccagcgg aataaaaatc caggccagga tcatccagaa acagccgagc gtcgcgctga
    23881 aagccgacgc accgtgacga cgataatcgc gataacgccc gataagccgc gcgttgaccg
    23941 gcgggataag caaccaccgg gtcaggatac tcatgatgca ctcccgactg gcgttttcag
    24001 cccggagtag ttcaacaggc accagttcgc cagcgtcagt atctcttcag ccgccagcgc
    24061 atcactgcga tattcaccta ctggttgctt agccgccagg cattcagcca tcgcttcatc
    24121 acgatgaatg agcatcggca gtaatcggcg ctggctttgc aaccaaagct ggtaaatatc
    24181 gtcctgaacc tgactgccaa tacggaagtc attaatcaaa atatgtgcgc catccggcag
    24241 cgcttgctga tgcagtcgga tatggcagtt ggcatccaca ttgacgattg ccagcgagtg
    24301 atcgcacaaa ctcagcagct ggtgggttat ctgcgaggca tcacgcggta agtcgattaa
    24361 aatccactgg taacgcccgc tggcttttag ttgctgtaag ccggagcaaa tatcgctcag
    24421 ccgggtttgc cagtgctgtg gattttcttg ttcttcaatg gataactgac caaaaggcag
    24481 caaatcgagc tgcgaggtgt agcgcaaccc agcgtcacgc cagtcctggc catccagcat
    24541 cgctctggcc cagccctgac ggtgggtaaa atcaacatta aatgacaggc gcaacaagtt
    24601 gtccgggcag gcatcgacca ccaggacatt ttctcccaac atttgtaatg accaggctaa
    24661 tgcggcggtg atggttgttg tccccacgcc tccccgcacc ccctgcaatc ccagtacggc
    24721 cattcaccaa tcccctactt ttgttgcgca aactctgcca gcaacggcca gcgttttaat
    24781 gccgcggcca actgttcgcg ttgggaaata tcggcataat caatatcagg cagtgaaaat
    24841 acctgcttta acgccacaat atcattctgg aagatatagc ctatcgcggg atcaggcaga
    24901 gtatctggtt cattgttatt cattttgctt gatccctatg aaataaccgt accgttcatg
    24961 agacaattct aaccgtgagc atttcgccgg tttattgttt acggcgagac gggaatttgc
    25021 tcactttttg actttccgtt acgcaacaga aaaagttaaa aacgaaaaga ctaaaatcac
    25081 acgtcttgtg accttctaaa ttgattcaca
//
LOCUS       DADMHC010000043        24798 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.043, whole genome shotgun sequence.
ACCESSION   DADMHC010000043 DADMHC010000000
VERSION     DADMHC010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 24798)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24798)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24798
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.043"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..663)
                     /locus_tag="JNZ57_001455"
     CDS             complement(<1..663)
                     /locus_tag="JNZ57_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001243518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TniQ family protein"
                     /protein_id="HAY8827726.1"
                     /translation="MRNFPVPYSNELIYSTIARAGVYQGIVSPKQLLDEVYGNRKVVA
                     TLGLPSHLGVIARHLHQTGRYAVQQLIYEHTLFPLYAPFVGKERRDEAIRLMEYQAQG
                     AVHLMLGVAASRVKSDNRFRYCPDCVALQLNRYGEAFWQRDWYLPALPYCPKHGALVF
                     FDRAVDDHRHQFWALGHTELLSDYPKDSLSQLTALAAYIAPLLDAPRAQELSPSLEQW
                     TLF"
     gene            complement(666..2333)
                     /locus_tag="JNZ57_001456"
     CDS             complement(666..2333)
                     /locus_tag="JNZ57_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001276994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HAY8827727.1"
                     /translation="MSATRIQAVYRDTGVEAYRDNPFIEALPPLQESVNSAASLKSSL
                     QLTSSDLQKSRVIRAHTICRIPDDYFQPLGTHLLLSERISVMIRGGYVGRNPKTGDLQ
                     KHLQNGYERVQTGELETFRFEEARSTAQSLLLIGCSGSGKTTSLHRILATYPQVIYHR
                     ELNVEQVVYLKIDCSHNGSLKEICLNFFRALDRALGSNYERRYGLKRHGIETMLALMS
                     QIANAHALGLLVIDEIQHLSRSRSGGSQEMLNFFVTMVNIIGVPVMLIGTPKAREIFE
                     ADLRSARRGAGFGAIFWDPIQQTQRGKPNQEWIAFTDNLWQLQLLQRKDALLSDEVRD
                     VWYELSQGVMDIVVKLFVLAQLRALALGNERITAGLLRQVYQDELKPVHPMLEALRSG
                     IPERIARYSDLVVPEIDKRLIQLQLDIAAIQEQTPEEKALQELDTEDQRHLYLMLKED
                     YDSSLLIPTIKKAFSQNPTMTRQKLLPLVLQWLMEGETVVSELEKPSKSKKVSAIKVV
                     KPSDWDSLPDTDLRYIYSQRQPEKTMHERLKGKGVIVDMASLFKQAG"
     gene            complement(2330..4438)
                     /locus_tag="JNZ57_001457"
     CDS             complement(2330..4438)
                     /locus_tag="JNZ57_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000267723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HAY8827728.1"
                     /translation="MWQINEVVLFDNDPYRILAIEDGQVVWMQISADKGVPQARAELL
                     LMQYLDEGRLVRTDDPYVHLDLEEPSVDSVSFQKREEDYRKILPIINSKDRFDPKVRS
                     ELVEHVVQEHKVTKATVYKLLRRYWQRGQTPNALIPDYKNSGAPGERRSATGTAKIGR
                     AREYGKGEGTKVTPEIERLFRLTIEKHLLNQKGTKTTVAYRRFVDLFAQYFPRIPQED
                     YPTLRQFRYFYDREYPKAQRLKSRVKAGVYKKDVRPLSSTATSQALGPGSRYEIDATI
                     ADIYLVDHHDRQKIIGRPTLYIVIDVFSRMITGFYIGFENPSYVVAMQAFVNACSDKT
                     AICAQHDIEISSSDWPCVGLPDVLLADRGELMSHQVEALVSSFNVRVESAPPRRGDAK
                     GIVESTFRTLQAEFKSFAPGIVEGSRIKSHGETDYRLDASLSVFEFTQIILRTILFRN
                     NHLVMDKYDRDADFPTDLPSIPVQLWQWGMQHRTGSLRAVEQEQLRVALLPRRKVSIS
                     SFGVNLWGLYYSGSEILREGWLQRSTDIARPQHLEAAYDPVLVDTIYLFPQVGSRVFW
                     RCNLTERSRQFKGLSFWEVWDIQAQEKHNKANAKQDELTKRRELEAFIQQTIQKANKL
                     TPSTTEPKSTRIKQIKTNKKEAVTSERKKRAEHLKPSSSGDEAKVIPFNAVEADDQED
                     YSLPTYVPELFQDPPEKDES"
     gene            complement(4425..5246)
                     /locus_tag="JNZ57_001458"
     CDS             complement(4425..5246)
                     /locus_tag="JNZ57_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heteromeric transposase endonuclease subunit
                     TnsA"
                     /protein_id="HAY8827729.1"
                     /translation="MAKANSSFSEVQIARRIKEGRGQGHGKDYIPWLTVQEVPSSGRS
                     HRIYSHKTGRVHHLLSDLELAVFLSLEWESSVLDIREQFPLLPSDTRQIAIDSGIKHP
                     VIRGVDQVMSTDFLVDCKDGPFEQFAIQVKPAAALQDERTLEKLELERRYWQQKQIPW
                     FIFTDKEINPVVKENIEWLYSVKTEEVSAELLAQLSPLAHILQEKGDENIINVCKQVD
                     IAYDLELGKTLSEIRALTANGFIKFNIYKSFRANKCADLCISQVVNMEELRYVAN"
     gene            complement(5406..7235)
                     /gene="glmS"
                     /locus_tag="JNZ57_001459"
     CDS             complement(5406..7235)
                     /gene="glmS"
                     /locus_tag="JNZ57_001459"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HAY8827730.1"
                     /translation="MCGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMT
                     RLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEANAHPHVSEHIMVVHNGII
                     ENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTV
                     IMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRFIFLEEGDIAEITRR
                     SVNIFDKTGAEVKRQDIESNLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQ
                     VDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYR
                     KSAVRRNSLMITLSQSGETADTLAGLRLLKELGYLGSLAICNVPGSSLVRESDLALMT
                     NAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLS
                     QDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPL
                     ALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMP
                     HVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE"
     gene            complement(7397..8767)
                     /gene="glmU"
                     /locus_tag="JNZ57_001460"
     CDS             complement(7397..8767)
                     /gene="glmU"
                     /locus_tag="JNZ57_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HAY8827731.1"
                     /translation="MLNNAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAAN
                     ELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILML
                     YGDVPLISVETLQRLRDAKPQGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATD
                     EQRQIQEINTGILIANGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQ
                     RLSEVEGVNNRLQLSRLERVYQSEQAEKLLLAGVMLRDPARFYLRGTLTHGRDVEIDT
                     NVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEISPYTVVEDVNLAAACTIGPFARLRP
                     GAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDAEIGDNVNIGAGTITCNYDGANK
                     FKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVTRNVGENALAISRVPQTQKEGWR
                     RPVKKK"
     gene            complement(9118..9537)
                     /gene="atpC"
                     /locus_tag="JNZ57_001461"
     CDS             complement(9118..9537)
                     /gene="atpC"
                     /locus_tag="JNZ57_001461"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001251972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HAY8827732.1"
                     /translation="MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLT
                     AIKPGMIRIVKQHGHEEFIYLSGGILEVQSGNVTVLADTAIRGQDLDEARAMEAKRKA
                     EEHISSSHGDVDYAQASAELAKAIAQLRVIELTKKAM"
     gene            complement(9558..10940)
                     /gene="atpD"
                     /locus_tag="JNZ57_001462"
     CDS             complement(9558..10940)
                     /gene="atpD"
                     /locus_tag="JNZ57_001462"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017800291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HAY8827733.1"
                     /translation="MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNEHLVLEVQ
                     QQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEI
                     GEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNM
                     MELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRL
                     RVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEM
                     GVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPA
                     VDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELSEEDKLVVA
                     RARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIRGFKGIMEGEYDHLPEQAFYMVGSI
                     EEAVEKAKKL"
     gene            complement(10967..11830)
                     /gene="atpG"
                     /locus_tag="JNZ57_001463"
     CDS             complement(10967..11830)
                     /gene="atpG"
                     /locus_tag="JNZ57_001463"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HAY8827734.1"
                     /translation="MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRP
                     YAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAE
                     MKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAY
                     DEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDT
                     LLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQE
                     LTEIVSGAAAV"
     gene            complement(11881..13422)
                     /gene="atpA"
                     /locus_tag="JNZ57_001464"
     CDS             complement(11881..13422)
                     /gene="atpA"
                     /locus_tag="JNZ57_001464"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001176751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HAY8827735.1"
                     /translation="MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGL
                     ADCMQGEMISLPGNRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRG
                     LLGRVVNTLGAPIDGKGPLDHDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIG
                     RGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGAL
                     ANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLL
                     LRRPPGREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKNGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGG
                     IRTALAQYRELAAFSQFASDLDDATRKQLDHGQKVTELLKQKQYAPMSVAQQSLVLFA
                     AERGYLADVELSKIGSFEAALLAYVDRDHAPLMQEINQTGGYNDEIEGKLKGILDSFK
                     ATQSW"
     gene            complement(13435..13968)
                     /gene="atpH"
                     /locus_tag="JNZ57_001465"
     CDS             complement(13435..13968)
                     /gene="atpH"
                     /locus_tag="JNZ57_001465"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HAY8827736.1"
                     /translation="MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQM
                     AELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAV
                     SEATAEVDVISAAALSEQQLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVI
                     DGSVRGRLERLADVLQS"
     gene            complement(13983..14453)
                     /gene="atpF"
                     /locus_tag="JNZ57_001466"
     CDS             complement(13983..14453)
                     /gene="atpF"
                     /locus_tag="JNZ57_001466"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001052215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HAY8827737.1"
                     /translation="MNLNATILGQAIAFVLFVLFCMKYVWPPLMAAIEKRQKEIADGL
                     ASAERAHKDLDLAKASATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIV
                     AQAQAEIEAERKRAREELRKQVAILAVAGAEKIIERSVDEAANSDIVDKLVAEL"
     gene            complement(14515..14754)
                     /gene="atpE"
                     /locus_tag="JNZ57_001467"
     CDS             complement(14515..14754)
                     /gene="atpE"
                     /locus_tag="JNZ57_001467"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004246596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HAY8827738.1"
                     /translation="MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPD
                     LIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA"
     gene            complement(14801..15616)
                     /gene="atpB"
                     /locus_tag="JNZ57_001468"
     CDS             complement(14801..15616)
                     /gene="atpB"
                     /locus_tag="JNZ57_001468"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HAY8827739.1"
                     /translation="MASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINID
                     SMFFSVVLGLLFLVLFRSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIA
                     PLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFIL
                     ILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAG
                     ELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH"
     gene            complement(15625..16005)
                     /gene="atpI"
                     /locus_tag="JNZ57_001469"
     CDS             complement(15625..16005)
                     /gene="atpI"
                     /locus_tag="JNZ57_001469"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418195.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit I"
                     /protein_id="HAY8827740.1"
                     /translation="MSVSLVSRNVARKLLLVQLLVVIASGLLFSLKDPFWGVSAISGG
                     LAVFLPNVLFMIFAWRHQAHTPAKGRVAWTFAFGEAFKVLAMLVLLVVALAVLKAVFL
                     PLIVTWVLVLVVQILAPAVINNKG"
     gene            complement(16622..17245)
                     /gene="rsmG"
                     /locus_tag="JNZ57_001470"
     CDS             complement(16622..17245)
                     /gene="rsmG"
                     /locus_tag="JNZ57_001470"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HAY8827741.1"
                     /translation="MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVR
                     DPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRV
                     RFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGR
                     FYALKGQMPEDEIALLPEEYQVESVVKLQVPALDGERHLVVIKANKI"
     gene            complement(17269..19158)
                     /gene="mnmG"
                     /locus_tag="JNZ57_001471"
     CDS             complement(17269..19158)
                     /gene="mnmG"
                     /locus_tag="JNZ57_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000499793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HAY8827742.1"
                     /translation="MFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQ
                     MSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRV
                     LYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD
                     GKIHIGLDNYSGGRAGDPPSIPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQ
                     HGGNPMPVFSFMGNASQHPQQVPCYITHTNEKTHDVIRSNLDRSPMYAGVIEGVGPRY
                     CPSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENA
                     KIVRPGYAIEYDFFDPRDLKPTLESKFIQGLFFAGQINGTTGYEEAAAQGLLAGLNAA
                     RLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTE
                     IGRELGLVDDERWARFNEKLENIERERQRLKSTWVTPSAEAAAEVNAHLTAPLSREAS
                     GEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNE
                     NTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISGVTPAAISILLVWLKKQGM
                     LRRSA"
     gene            complement(19537..19980)
                     /gene="mioC"
                     /locus_tag="JNZ57_001472"
     CDS             complement(19537..19980)
                     /gene="mioC"
                     /locus_tag="JNZ57_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein MioC"
                     /protein_id="HAY8827743.1"
                     /translation="MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLEDL
                     SASGIWLIISSTHGAGDIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREYDTFCGAI
                     DKLEAELKNSGAKQTGETLKINILDHDIPEDPAEEWLGSWINLLK"
     gene            complement(20070..20528)
                     /gene="asnC"
                     /locus_tag="JNZ57_001473"
     CDS             complement(20070..20528)
                     /gene="asnC"
                     /locus_tag="JNZ57_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator AsnC"
                     /protein_id="HAY8827744.1"
                     /translation="MENYLIDNLDRGILEALMGNARTAYAELAKQFGVSPGTIHVRVE
                     KMKQAGIITGARIDVSPKQLGYDVGCFIGIILKSAKDYPSALAKLESLDEVTEAYYTT
                     GHYSIFIKVMCRSIDALQHVLINKIQTIDEIQSTETLIVLQNPIMRTIKP"
     gene            20680..21672
                     /gene="asnA"
                     /locus_tag="JNZ57_001474"
     CDS             20680..21672
                     /gene="asnA"
                     /locus_tag="JNZ57_001474"
                     /EC_number="6.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--ammonia ligase"
                     /protein_id="HAY8827745.1"
                     /translation="MKTAYIAKQRQISFVKSHFSRQLEECLGLIEVQAPILSRVGDGT
                     QDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPD
                     EDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATEAAVSEEFGLAPF
                     LPDQIHFVHSQELLSRYPDLDAKGRERAIAKDLGAVFLVGIGGKLSDGHRHDVRAPDY
                     DDWSTPSELGHAGLNGDILVWNPVLEDAFELSSMGIRVDADTLKHQLALTGDEDRLQL
                     EWHQALLRGEMPQTIGGGIGQSRLTMLLLQLPHIGQVQCGVWPAAVRESVPSLL"
     gene            complement(21677..23128)
                     /gene="viaA"
                     /locus_tag="JNZ57_001475"
     CDS             complement(21677..23128)
                     /gene="viaA"
                     /locus_tag="JNZ57_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase RavA stimulator ViaA"
                     /protein_id="HAY8827746.1"
                     /translation="MLTLDTLNVMLAVSEEGLIEEMIIALLASPQLAVFFEKFPRLKA
                     AITDDVPRWREALRSRLKDARVPPELTEEVMCYQQSQLLSTPQFIVQLPQILDLLHRL
                     NSPWAEQARQLVDANSTITSALHTLFLQRWRLSLIVQATTLNQQLLEEEREQLLSEVQ
                     ERMTLSGQLEPILADNNTAAGRLWDMSAGQLKRGDYQLIVKYGEFLNEQPELKRLAEQ
                     LGRSREAKSIPRNDAQMETFRTMVREPATVPEQVDGLQQSDDILRLLPPELATLGITE
                     LEYEFYRRLVEKQLLTYRLHGESWREKVIERPVVHKDYDEQPRGPFIVCVDASGSMGG
                     FNEQCAKAFCLALMRIALAENRRCYIMLFSTEIVRYELSGPQGIEQAIRFLSQQFRGG
                     TDLASCFRAIMERLQSREWFDADAVVISDFIAQRLPDDVTSKVKELQRVHQHRFHAVA
                     MSAHGKPGIMRIFDHIWRFDTGMRSRLLRRWRR"
     gene            complement(23122..24600)
                     /gene="ravA"
                     /locus_tag="JNZ57_001476"
     CDS             complement(23122..24600)
                     /gene="ravA"
                     /locus_tag="JNZ57_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001339853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase RavA"
                     /protein_id="HAY8827747.1"
                     /translation="MSGKNFPPEQFVGKGLYERSHAIRLCLLAALSGESVFLLGPPGI
                     AKSLIARRLKFAFQNARAFEYLMTRFSTPEEVFGPLSIQALKDEGRYERLTSGYLPEA
                     EIVFLDEIWKAGPAILNTLLTAINERQFRNGAHVEKIPMRLLVAASNELPEADSSLEA
                     LYDRMLIRLWLDKVQDKANFRSMLTSQQDENDNPVPDALQVTDEEYERWQKEIGEITL
                     PDHVFELIFMLRQQLDKLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVDLILLKD
                     CLWYDAQSLNLIQQQIDVLMTGHAWQQQGMLTRLGAIVQRHLQLQQQQSDKTALTVIR
                     LGGIFSRRQQYQLPVNVTASTLTLLLQKPLKLHDMEVVHISFERSALEQWLSKGGEIR
                     GKLNGIGFAQKLNLEVDSTQHLVVRDVSLQGSTLALPGSSAEGLPGEIKQQLEELESD
                     WRKQHALFSEQQKCLFIPGDWLGRIEASLQDVGAQIRQAQQC"
BASE COUNT         6145 a         6434 c         5902 g         6317 t
ORIGIN      
        1 aaacagcgtc cactgctcaa ggcttgggga aagctcttgc gctcgtggag catctaacag
       61 aggggctata taagcagcta gtgctgttaa ttgagatagg gagtctttgg ggtagtctga
      121 aagcagctca gtatgaccca aagcccaaaa ttgatgtcgg tgatcatcta cagctctatc
      181 aaagaagact aaagcaccgt gttttggaca atatggcaaa gcgggcaaat accaatctcg
      241 ttgccaaaag gcttccccat acctatttag ctgaagagca acgcaatcag ggcagtatct
      301 aaagcggtta tcgctcttaa ctctagaagc agcgactcct agcattaaat gcaccgcacc
      361 ttgcgcttgg tactccatta accgaatagc ttcgtctcgg cgctccttgc ctacaaacgg
      421 agcatataaa gggaataagg tatgctcata aataagctgc tgaacagcgt aacgtcctgt
      481 ttgatgtaga tgtcttgcta tcacacctaa atgcgagggc agacctaagg tagcgaccac
      541 cttgcggttg ccatacacct catccaacag ctgcttagga ctaacaatcc cttgataaac
      601 gcctgcccgt gcaatagtgc tataaatcag ctcattcgag tacggaacag gaaagtttct
      661 catggctaac ctgcttgttt aaataagctc gccatatcca ctattacccc tttccctttt
      721 aaccgttcat gcatggtttt ttcaggttgg cgttgtgaat agatataacg taaatccgta
      781 tcaggcaagc tatcccagtc gctgggcttg actaccttta tagccgaaac ctttttactc
      841 ttggagggct tttctagttc tgacactacc gtttcgcctt ccatcaacca ctgcaaaaca
      901 agaggcagta acttttgtct tgtcatcgtt ggattctggc taaacgcttt tttaatagtg
      961 ggaattaaca ggcttgaatc gtaatcctct ttcagcatca gatataaatg acgctgatct
     1021 tcggtatcta actcttgaag ggctttttct tctggtgttt gttcttgtat cgctgcgata
     1081 tctagctgaa gttggattaa ccgtttatca atctcgggaa cgactagatc agaataacga
     1141 gcaatgcgtt ctgggatacc cgagcgtaat gcctctagca tggggtgcac aggctttaac
     1201 tcatcttgat acacttgccg caataaacca gcggtaatac gctcattgcc taaagctagc
     1261 gcacggagct gagcgagtac aaaaagtttt actacaatgt ccatcactcc ttggcttagc
     1321 tcataccaca catcacggac ctcatccgat aacagcgcat ctttgcgttg taaaagctgt
     1381 aattgccaaa gattatccgt aaaagcgatc cactcttgat tgggctttcc acgttgcgtt
     1441 tgttgtatag gatcccagaa tatagctcca aaccctgccc ctctacgtgc agaccgcaaa
     1501 tcagcctcaa aaatctctcg tgctttaggg gtaccaatca acatcactgg tacgccaata
     1561 atattcacca tcgtcacaaa aaagttcagc atctcttgag atccacccga acgagagcgg
     1621 cttaaatgct gaatttcatc aataaccaac aaccctaaag catgtgcatt ggctatttgc
     1681 gacatcaaag ccaacatggt ttctatacca tgacgtttta agccataacg acgctcatag
     1741 ttcgagccca aggctcgatc caacgctctg aaaaaattca agcagatttc ttttagcgaa
     1801 ccattatgcg agcagtctat tttcaaatac accacctgct ctacattgag ttcacgatgg
     1861 taaatcacct gaggatacgt ggctagaata cgatgaagag aggtcgtctt cccactacca
     1921 gaacaaccaa ttaacaataa gctttgtgcc gtagatcgtg cctcctcaaa gcgaaatgtc
     1981 tccaactctc ccgtttgaac acgctcataa ccattttgta aatgcttttg taaatctcct
     2041 gttttaggat ttctgcctac gtagccacct cgaatcatga ccgaaatacg ctcacttagt
     2101 agcaaatgcg tacctaatgg ctgaaaatag tcatctggaa tacgacaaat ggtatgagct
     2161 ctgataacac gggacttttg caagtcagag gaagtaagct gtaaagagga tttcagtgat
     2221 gcagcactat tcactgactc ttgtaatggt ggtaaggcct cgataaaagg attatcacga
     2281 taagcctcta cccccgtatc acgataaact gcttgaatcc gggtagcact catgactcat
     2341 ccttttctgg tggatcctga aataattcag gcacgtatgt gggtaggctg taatcttctt
     2401 gatcatccgc ttccactgcg ttgaaaggaa taactttagc ctcatcacct gaagagcttg
     2461 gcttcaaatg ctccgcacgt tttttacgct ccgaggtcac ggcttctttt ttattagttt
     2521 taatctgctt aatgcgtgtt gatttgggct cagtagtact gggcgttaac ttattcgctt
     2581 tctgaatggt ttgctgaata aacgcctcaa gctccctgcg tttagttaac tcatcctgct
     2641 tcgcattggc tttattgtgt ttttcttgtg cttgtatatc ccaaacctcc caaaatgaga
     2701 gacctttaaa ctgccgacta cgttccgtca gattacagcg ccaaaataca cggctgccaa
     2761 cttgcggaaa caaataaatc gtatcaacca gcactgggtc ataagccgct tctaaatgtt
     2821 gaggtctagc tatatcagtg ctccgctgca accaaccctc acgcagaatc tctgaccccg
     2881 agtaatacaa accccacaaa ttaacgccaa atgaagaaat agagaccttt cggcgaggca
     2941 gtaacgctac tcgcaactgc tcttgctcca cagcccttaa actacctgta cgatgctgca
     3001 taccccattg ccatagctgg acaggaatag acggtaaatc tgtaggaaaa tcagcatctc
     3061 gatcgtattt atccatcacc agatggttat ttctgaataa gatcgtacgc aaaataattt
     3121 gtgtgaactc aaataccgac agagatgcat ctaacctata gtctgtttca ccatggcttt
     3181 tgatccgact gccctctaca atgccaggtg caaaggactt aaactcggct tgtagtgttc
     3241 taaaagtgct ttccactatg cctttagcat cgccacgtct aggtggagca ctttccactc
     3301 gcacattaaa actagaaact aaggcttcga cctgatgact cattaattcg ccacggtccg
     3361 ctagcaacac atctggcaaa cctacacacg gccagtctga gctactaatc tcaatatcat
     3421 gctgggcaca aatggccgtt ttgtcagagc aagcatttac aaaagcctgc atcgccacca
     3481 cataagacgg attttcaaag ccgatataaa agcccgtgat catccgacta aacacatcaa
     3541 tcacaatgta aagcgttggt cttcctatga ttttttggcg atcatgatga tccactaaat
     3601 aaatatcagc aatcgtggca tcaatctcat aacgactccc agggcctaac gcctgagaag
     3661 tggctgtact acttaagggt cgtacgtctt ttttatatac ccctgcttta actctagact
     3721 ttaagcgctg agctttaggg tattctcgat cataaaaata acgaaactga cgtagtgttg
     3781 ggtaatcctc ttggggaatg cgaggaaaat actgagcaaa caagtccaca aatcgtctat
     3841 aggcaacggt ggtctttgta cctttttgat ttaacaggtg cttttctatg gtcaacctaa
     3901 aaaggcgttc aatctcgggc gttaccttgg ttccttcacc cttaccatat tctctggctc
     3961 ggccaatctt tgctgttcct gtcgctgaac gtctttcccc tggtgcaccg ctgtttttgt
     4021 agtcaggaat taatgcatta ggcgtttgac cacgctgcca gtaacggcgt aacaacttat
     4081 aaactgtagc cttagtaacc ttatgttctt ggaccacatg ctcaacgagt tcgcttctga
     4141 ctttagggtc gaaacgatcc ttactattaa taataggaag aatttttcga taatcctcct
     4201 cgcgcttctg gaagctgaca gaatctacag acggctcttc taaatcaaga tgtacataag
     4261 ggtcatcagt tctaactaag cggccttcat ctaaatactg cattagcaac aactcagccc
     4321 tagcttgtgg aactccttta tcagcgctta tttgcatcca gacaacttgg ccatcctcta
     4381 tagccaaaat gcgatacgga tcattatcaa atagcacaac ctcattaatt tgccacatag
     4441 cgcaactcct ccatattcac tacttggcta atacagagat ctgcacactt atttgccctg
     4501 aaagacttat aaatattgaa cttaataaaa ccatttgcgg ttaaggctcg tatctcactc
     4561 aatgttttgc ctaactccaa atcataagca atatcaacct gcttacagac attgataatg
     4621 ttttcatctc ctttttcttg caggatatgg gccaatgggg atagttgtgc taaaagctcc
     4681 gcagaaactt cttctgtttt cactgaataa agccattcaa tattttcttt tactacggga
     4741 tttatttctt tatcagtaaa aatgaaccaa ggaatttgct tttgctgcca atagcgacgc
     4801 tctagttcta gtttttctaa ggtacgctcg tcttgtaagg ctgctgcagg tttgacttga
     4861 atagcaaact gctcaaaagg accatctttg cagtccacta aaaaatcagt agacataacc
     4921 tgatctacac cacgaataac aggatgctta ataccactat ctattgcaat ctgcctggta
     4981 tcactaggta ataaggggaa ctgctcgcgt atatctagca cgctgctctc ccactcaaga
     5041 ctgagaaaaa cagcaagctc taagtcagat agcaaatgat ggactcgtcc cgtcttatga
     5101 gaataaatac ggtgggaacg acctgaagaa ggaacttctt gtactgttag ccatggaata
     5161 tagtctttac catgcccttg gccacgcccc tctttaatac gacgggcaat ttgcacttca
     5221 gaaaatgaag agtttgcttt agccataaca aaagtccagt atgctttttc acagcataac
     5281 tggactgatt tcagtttaca actattctgt ctagtttaag actttattgt catagtttag
     5341 atctattttg ttcagtttaa gactttattg tccgcccaca agcccttttt tatctatgat
     5401 agtgattact caaccgtaac cgattttgcc aagttacgcg gctggtcaac gtcggtgcct
     5461 ttgatcagcg cgacatggta agccagcagc tgcagcggaa cggtgtagaa gatcggtgca
     5521 atcacctctt ccacatgcgg catctcgatg atgtgcatgt tatcgctact tacaaaaccc
     5581 gcatcctgat cggcgaagac atacaactga ccgccacgcg cgcgaacttc ttcaatgttg
     5641 gatttcagtt tttccaacag ttcgttgttc ggtgcaacga cgataaccgg catatccgcg
     5701 tcaatcagcg ccagcgggcc gtgtttcagc tcgccagcag cgtaggcttc agcgtgaatg
     5761 taggagatct ctttcagctt caatgcgcct tccagtgcga ttgggtactg atcgccacgg
     5821 cccaggaaca gtgcgtgatg tttgtcagag aaatcttctg ccagagcttc aatgcgtttg
     5881 tcctgagata gcatctgctc aatacggctc ggcagcgcct gcagaccatg cacaatgtca
     5941 tgttcaatgg aggcatccag acctttcagg cgagacagct tcgccaccag catcaacagc
     6001 acagttaact gagtggtgaa tgctttagtg gacgccacgc cgatttccgt acccgcgttg
     6061 gtcatcagcg ccagatcgga ttcgcgcacc agagaagaac ccggaacgtt acagattgcc
     6121 agcgaaccaa ggtaacccag ctctttcaac agacgcaggc ccgccagggt atccgcggtt
     6181 tcgccagact gtgacaaggt gatcatcagg ctgttacgac gcacggcaga tttacgatag
     6241 cggaattcag aggcgatttc gacgtcgcac ggaatacctg ccagcgattc aaaccagtag
     6301 cgggaaacca taccggagtt ataagaagta ccacaggcga ggatctgaat atgctcaacc
     6361 ttcgacagca gttcgtcggc gttcggtccc agctcgctta aatcaacctg accgtggctg
     6421 atgcgcccgg taagggtgtt tttgatcgcg ttcggctgtt cgtagatctc tttctgcatg
     6481 tagtgacggt aaataccttt atcgcccgcg tcatattgca gattggattc gatatcctga
     6541 cgttttactt ccgcgccagt tttatcgaag atgtttaccg aacggcgagt aatttccgca
     6601 atatcgccct cttcaaggaa gataaagcga cgggtcaccg gcagcagcgc cagctggtca
     6661 gaagcgataa agttttcgcc catacccagg ccaatcacca gcggactacc agaacgtgcc
     6721 gccagcaggg tatccgggtg acgggagtcc atgatcactg taccgtacgc accgcgcagc
     6781 tgcgggatag cacgcagaac agcctcacgc agagtcccgc cttgtttcag ctcccagttc
     6841 accagatggg caatcacttc ggtgtcggtt tcagaaacga aggtatagcc acgcgctttt
     6901 aactcttcac gcagcggttc atggttttcg atgatgccgt tatgcaccac cataatgtgt
     6961 tcagaaacat gcggatgcgc gttagcttct gaaggttcac cgtgggtcgc ccagcgagtg
     7021 tgagcaatac cggtgccgcc atgcagagga tgttcttccg ctgcctgagc cagcatctgg
     7081 actttaccga ggcgacgcag gcgggtcata tgaccttccg catcaacaac ggccagaccg
     7141 gcagagtcat atccgcggta ttccagacga cgtaaacctt caagaaggat ttctgctaca
     7201 tcacgttgcg cgatcgcgcc aacaattcca cacatagttt ttgattccga tttatatcgt
     7261 tgtcggtcaa cctgtatgcc cgttttttcg ggcgccccga gccttgtaga gagtggggtt
     7321 atttttatag ttactgcttg tgggagggag attatgttat ctcctcatcc cagatgaccg
     7381 gattacccgg ccagaattac tttttcttta ccggacgacg ccagccttct ttctgagtct
     7441 gcggcacacg gctgatagct aatgcatttt cgccgacatt acgcgtcaca gttgtacccg
     7501 cagcaatggt cgcgcctttg cctactgtta ccggggccac cagctgagtg tcggaaccga
     7561 caaacacatc gtcgccgata atggtcttaa atttattcgc accatcgtag ttgcaggtaa
     7621 tggttcccgc gccgatgtta acgttatcgc caatttccgc atcgcccagg taagtcagat
     7681 gaccagcttt cgagccttta cccagacgcg cttttttcat ctcaacaaag ttaccgacgt
     7741 gtgcaccttc cagcaactca gcaccaggac gcagacgggc aaacgggcca atagtacagg
     7801 ccgctgccag attcacgtct tccacaacgg tatacggact gatttcgcaa tcatcgccaa
     7861 tcacgctgtt tttaatcacg caaccggtgc cgattttcac gcgatgaccg agagtcacgt
     7921 tgccctcgat gataacgtta gtatcaattt caacatcgcg cccgtgagta agcgtaccgc
     7981 gcagataaaa acgcgccgga tcgcgcagca taacgcctgc taacagcagt ttttcagcct
     8041 gttcggactg gtaaacgcgc tccagacggg agagttgcag gcggttattc acaccttcta
     8101 cttcgcttaa acgttgcgga tgaacggcga cgatttcacg cccttcctga tacgccagcg
     8161 caataatgtc ggtgatgtag tattcgccct gagcattatt gttggtcagc ttcgccagcc
     8221 agcgtttcat atctgcgccg ttagcgatca gaatgccggt gttgatctcc tgaatctgac
     8281 gctgctcgtc ggtggcatct ttgtgctcaa caatgccggt aactttgcca ttttcacggg
     8341 tgatacgtcc ataaccggtc ggatcatcca gtttcaccgt cagcagacca atgccaccct
     8401 gcggtttagc atcacgcagg cgctggagtg tttcgacaga gatcagcggc acgtcgccgt
     8461 agagcattaa aatgtcttca tcatcggcaa agaaaggtgc ggcctgctgc attgcatgac
     8521 ccgtacccag ctgctctgcc tgaagcaccc agttaaggtt gtcgtctttc agcgcctgtt
     8581 taagcagatc gccgccgtga ccgtacacca ggtgaacgtg cgctgcgcct aattcattcg
     8641 cagcatcaat gacatgctga accatcgctt tcccggcaag ggtatgcagc actttcggaa
     8701 gatcggaata catgcgcgtg cctttgcctg cggcaaggat cactacgctc atagcattat
     8761 tcaacatacg cgtcctgact gtaatttgag aacgaattta aaccgcttca ccttgaaaaa
     8821 actacatttt tttcatcgtg aaatggacag aggataaatt gttcaataac ggattatccc
     8881 cgctgacgaa agtgccattt tcgaccatcg tcacgccttt tgtctgcaga aaattaaggc
     8941 agtaccttca tttaagcgtc aggtggatgt ttttgctctt atttcgatca atgaataaac
     9001 gggaaaacag gggtgtttta tatcagcagg atctatgtga acgctcttca ggacggatca
     9061 cgcgtaaaaa aaaaccagcc tgtttccaga ctggcttttg tgcttttcaa gccggtgtta
     9121 catcgctttt ttggtcaact cgataacgcg cagctgcgcg atcgctttgg ccagttccgc
     9181 agacgcctga gcgtaatcta cgtcgccgtg agagctgcta atgtgctctt cagccttacg
     9241 tttcgcttcc atggctcgcg cttcgtcgag atcctggccg cgaattgcgg tgtcggccag
     9301 aacggtcacg ttgccagact gcacttcaag aatgccgcca gacagataga taaactcttc
     9361 gtgaccgtgc tgtttcacga tgcgaatcat accaggctta atggcggtga gcagcggtgc
     9421 gtggccaggg tagatcccca gttcaccttc gctacccgtt acctggattt tctcgaccag
     9481 accagagaac atttgttgct ctgcgctgac gacgtccagg tggtaagtca ttgccatatc
     9541 accctccgat taaggcgtta aagttttttg gctttttcca cagcttcttc gatggaaccg
     9601 accatgtaga acgcctgctc cggcaggtga tcgtattcgc cttccatgat gcctttaaag
     9661 ccacggatgg tgtctttcag ggagacgtat ttacccggag aaccggtgaa tacttctgcc
     9721 acgaagaacg gctgggacag gaagcgctgg atcttacgag cacgcgctac caccagtttg
     9781 tcttcttcag acagttcatc catacccagg atggcgatga tgtctttcag ttcctgataa
     9841 cgttgcagga tggactgaac gccacgcgcg gtgtcgtagt gttcctgacc aaccaccagc
     9901 gggtccagct gacggctggt ggagtccagc gggtcaacgg ccgggtagat acccagagac
     9961 gcgatctgac ggctcagtac cacggttgcg tcaaggtgcg caaaggtggt tgccggagac
    10021 gggtcagtca agtcatccgc aggtacgtat accgcctgta cggaggtgat agaaccagtt
    10081 ttggtggagg tgatacgttc ctgcagaacg cccatctctt ccgccagggt cggctgataa
    10141 cctaccgctg aaggcatacg gcccagcagt gcggatactt ccgtaccggc cagggtgtaa
    10201 cgatagatgt tgtcaacgaa cagcagaacg tcacgacctt cgtcacggaa tttctcagcc
    10261 atggtcagac cggtcagagc aacgcgcaga cggtttcccg gcggctcgtt catctggcca
    10321 tacaccaggg atactttgtc gataacgttg gagtcggtca tttcgtggta gaagtcgtta
    10381 ccctcacgag tacgttcacc tacgcccgca aacacagagt aaccggagtg ctcgatcgcg
    10441 atgttacgaa tgagctccat catgtttacg gttttaccta cacccgcacc accgaacaga
    10501 ccaactttac cgcccttagc gaacggacac atcaggtcga taactttgat accggtttcc
    10561 agcagttcct gagagtttga cagctcttcg taggaaggtg ctgcgcggtg aatcgcccaa
    10621 cgctcttctt caccgatctc gcctttcatg tcgaccggtt cacccagtac gttcatgata
    10681 cggcccagag tcgctttacc taccgggact tcgatcgggt gttcgaggtc ttttacatcc
    10741 agaccgcgac gcagaccgtc ggaggaaccc attgcgatgg tacgcacgat accgccgccg
    10801 agctgctgct gaacttccag caccagatgc tcattaccat tttgcacctc aagagcatcg
    10861 tacacgcgcg gtacggcatc ctgagggaat tcgacgtcaa ctacggcgcc gattacctgg
    10921 acaatctttc cagtagccat cttaaatcct ctacgaaata acctgtttaa accgcggcgg
    10981 cccccgagac gatctcggtg agttcctgag taatgctggc ctgacgagct ttgttgtata
    11041 ccaactgcag ctctttaatc aggctgccgc cattgtcggt cgcggctttc atcgccacca
    11101 tacgggcggc ctgctcgctg gccaggtttt caaccacgcc ctgataaacc tgagattcga
    11161 cataacgacg cagcagggta tccagcaacg ccttcggatc gggttcgtac aggtaatccc
    11221 aggatttatg tttcagatca tcatcatctg atgccggtaa cggcagcagc tggctgatgg
    11281 tcggaacctg agacatggtg ttaataaatt tgttgctgac aatgtaaagc ttgtccagac
    11341 ggccttcgtc gtaggcctgc aacatcactt ttaccggacc gatcagttcg gacagggaag
    11401 ggttatcccc catgccggtg acctgggcaa caacattgcc gcccacggag ttgaagaacg
    11461 acacgccttt cgagccgatc attgcgagat cgcattgaac gcctttgtcg gtccaggtct
    11521 tcatttccgc cagcagtttt ttgaacaggt taatgttcaa accaccgcac aaaccacggt
    11581 cggtcgacac caccaggtag cccacgcgtt taacgtcgcg gtcttccagg taagggtgct
    11641 tatattccag attaccatgt gcaaggtgac caatcacttt gcgcatggtt tctgcataag
    11701 gacggctggc cgccatgcga tcctgcgatt tacgcatttt ggaagcggcg accatctcca
    11761 tcgctttagt gatcttttgc gtgttctgga cgcttgcgat cttactacgt atctcttttg
    11821 cgccggccat gagcttctcc tcaatgcctt gcggcctgcc ctaaggcaag ccgccagacg
    11881 ttaccaggat tgggttgctt tgaaggaatc gaggatgcct ttcagtttgc cttcgatttc
    11941 gtcgttgtag ccaccggtct ggttgatctc ttgcatcaac ggagcgtgat cacggtcgac
    12001 gtaagccagc agagcggctt cgaagctgcc aattttcgac agttcaacat ccgccaggta
    12061 accacgttct gctgcgaaca gaaccagaga ctgctgcgca acggacatcg gcgcatactg
    12121 tttctgtttc agcagttcgg tcactttctg accgtggtca agctgcttac gtgttgcatc
    12181 gtcaaggtcg gatgcaaact gagagaacgc tgccagttca cgatactgtg ccagagcggt
    12241 acggatacca ccggacagtt ttttcatgat cttggtctgt gctgcaccac caacacggga
    12301 tacggaaata cccgggttaa ccgcaggacg aataccggcg ttgaacaggt tggtttccag
    12361 gaagatctga ccatcggtaa tggagattac gttggtcgga acgaacgcag aaacgtcacc
    12421 cgcctgagtt tcgataatcg gcagtgcggt cagagaaccg tttttccctt tcacttcacc
    12481 tttggtgaag gcttcaacgt attcggcgtt aacacgtgca gcacgctcca gcagacgaga
    12541 gtggaggtag aaaacgtcgc ccgggaatgc ttcacgtcct ggcggacgac ggagcagcag
    12601 ggagatctga cggtaagcaa cagcctgttt agacaggtca tcgtaaatga tcagcgcatc
    12661 ttcaccgcgg tcacggaagt attcgcccat tgcgcaaccg gcatacggtg ccaggtattg
    12721 cagtgcagcg gattcagacg cggttgctac cacaacgatg gtgttagcca gtgcgccgtg
    12781 ctcttccagt ttacgtacca cgttagaaat ggtggacgct ttctggccga tagcgacata
    12841 gatacatttg ataccggaat cgcgctggtt gatgatggca tcgatagcca gtgcggtttt
    12901 acctgtctga cggtcaccga tgatcaattc acgctgacca cgaccgattg ggatcatgga
    12961 gtcaacggct ttataaccgg tctgtaccgg ctgatctacg gactgacgtt cgataacgcc
    13021 cggagcgatt gcttctacag cagagaagcc gtcgtgatcc agcggacctt taccgtcgat
    13081 tggtgcaccc agagtgttaa ccacacggcc cagcaggcca cggccaaccg gaacttccag
    13141 gatacggcca gtacacttaa ctttcatgcc ttcggcaagg tcagcgtacg gacccataac
    13201 aaccgcacct acagagtcgc gctcgaggtt cagtgcgata gcgtaacggt tacccggcag
    13261 ggagatcatt tcaccctgca tacaatcggc caggccgtga atgcggataa caccgtcact
    13321 tacagaaaca atagtacctt cgttgtgagc ttcactcaca acattgaact gagcaatgcg
    13381 ctgcttgatc agttcgctga tttcggtgga attcagttgc atgctccagt ccccttaaga
    13441 ctgcaagacg tctgcaaggc gctcaagacg accgcgtacg ctgccgtcaa tgaccatatc
    13501 acccgctcgg atgataacgc ctgccattac agacttatcg attttgcaat tcagcttaac
    13561 tttgcgtgac agacgttttt ccatcgcagc agaaattttc gcgagctgtt gttcactcag
    13621 tgcggcagcg gaaatgacgt ctacctcagc ggtagcctca ctcacggcac gaaggtgaat
    13681 aaactgctcc agaacatccg ggagcgcgtt aagacgacca ttttcagcca ttacccgaat
    13741 caggttctga ccgttttcgt ccagttgctc accacaaact gcgataaacg actcggcgag
    13801 cgtttctggc gcaagcgcgc cagagagaag ctctgccatt tgttcgtttt tggttacctc
    13861 ggcggcaaac gccagcatgt cctgccagcg ttctacactt tggtgttcga cggcaaagtc
    13921 aaaagctgct ttggcgtagg ggcgagctac cgtaataaat tcagacatca gcccctccct
    13981 ccttacagtt cagcgacaag tttatccacg atgtcgctgt tagcagcttc atccacggaa
    14041 cgttcgatga tcttctcggc gccagcaaca gccaggatag caacttgctt acgcagctct
    14101 tcacgggcac gtttacgctc ggcttcaatt tctgcctgcg cctgggccac gattttagta
    14161 cgttcctgtt ctgcctcagc tttcgcttcg tccagaatct gcgagcggcg tttgttcgcc
    14221 tgctcgatga ttacctgggc ttccgctttc gcttttttca gctggtcggt cgcgctggcc
    14281 tttgcaaggt caaggtcctt atgtgctcgt tctgcggaag caaggccgtc agcaatttct
    14341 ttttgacgtt tttcgatggc tgccattaat ggcggccata cgtacttcat gcagaacaga
    14401 acgaacagga caaacgcgat ggcctggccg aggattgttg cgttaagatt cacagcacaa
    14461 tgcctctatt tagttaacgt tctgatattg ctctttaaat aaaagcaacg cttactacgc
    14521 gacagcgaac atcacgtaca gacccagacc tacagcgatc atcgggatag catccaccag
    14581 acccataacg ataaagaact gagtacgcag cagaggaatc agatcaggtt gacgcgctgc
    14641 gccttccaag aatttacccc cgaggatgcc gataccgatc gcagcaccga ttgccgccag
    14701 acccatcatc acagcggcag ccatgtacag cagatccata ttcaggtttt ccatgacagt
    14761 ctccagtttg tttcagttaa aacgtagtag tgttggtaaa ttaatgttct tcagacgcca
    14821 tcgacagata gacgatcgtc agaaccatga agatgaaggc ttgcagcgta atgatcagga
    14881 tgtggaaaat ggcccacggc acattcagga tccactgtga ccaccacggc aacagaccag
    14941 caatcagaat gaaaatcagc tcaccggcat acatgttacc gaacagtcgc aaaccgagtg
    15001 aaactggttt ggacagcagg cttacccctt caaggattaa gttgacagga atgaacgccc
    15061 agtgattgaa cggctgcagc gtcaactctt tcgtgaagcc gccgatgcct ttcattttga
    15121 tgctgtagaa cagaatcagg ataaatacgc ccaatgccat agacagcgtt acgttcacgt
    15181 ccgcagacgg aaccacacgc agtgcaggca gacccagtac atgttcagca atgtacggca
    15241 gcaggtcgat aggcagtaaa tccatcaggt tcatcaggaa tacccagacg aagatcgtca
    15301 gggccagcgg agcaatcagc ttgcttttgc catggtacat gtctttcacg ctaccattaa
    15361 caaagccgat caccagctca atcgcggtct gaaacttacc tggcacaccg ctggtcgcct
    15421 ttttggctac gctacggaat aaaaccagga acaacagacc cagcaccacc gagaagaaca
    15481 tggagtcaat attgattgtc cagaaggtgg ctggggggtt ttgtggatcc accagcgaga
    15541 atgtacgcag gtccagctga aggttattca ggtggtgtcc tatgtaatcc tgcggcgtca
    15601 tattttctga agccatgatg ccttttaccc tttgttgtta attacagccg gtgccagtat
    15661 ctgaaccacc agcaccaaaa cccacgtaac gatcagcggc aagaataccg cctttaaaac
    15721 cgccaacgcc accaccagta acaccaacat cgccaaaact ttgaaagctt cgccaaatgc
    15781 gaatgtccag gccacccggc ctttcgctgg tgtatgcgcc tggtgacgcc aggcaaatat
    15841 cataaacaaa acgttaggca gaaagactgc caggcccccg cttattgcag agacgcccca
    15901 gaaggggtct ttgaggctga acagcaatcc acttgctatc accaccagta actgaacgag
    15961 cagaagcttc cgagcaacgt ttcgactcac gagcgacaca gacatcacgt ttttcactcc
    16021 tgctcccttc gaggtatgcc gcgtgtcgta taaaactttc tttaaggctt agagtcaagc
    16081 atcaaaaagc ggtcaaatta tacggcgcgc ccccatgatt tcaaacaata agtagccaaa
    16141 aggtgaataa atgtttaaat atttttccag tgcatacaat tgcgactttt ctgctaaccc
    16201 tgttcgatca tgaaaaactg taaataacgc gtaaacactg gtgataaagc gtgcttcaga
    16261 tcacatattg cgcatgttcg cgcacagcat atttatttac ttggcaaatg atgcctttgc
    16321 aagtttatga tatttcagtc taaaaacaga tacagtttta ataaatgaca tttacacaac
    16381 aaaaaccacc cattgacatt tttaataatg ttttagcagc caatgatggt tcttagcgcc
    16441 gatttttagc agactgatat tttcactaat gacttatttt ctgcttacca aaaaaagcca
    16501 cgttatcttg ttgatgcaaa agagtgaacg tggcgttaaa tgtaaccagt tatatcagta
    16561 gaaaacctgg ttgttgttaa cagtctaacc ggtcaatttt ttatgatttt tttgataaaa
    16621 attaaatttt atttgcttta atcaccacca gatgacgttc gccatccagg gctggaacct
    16681 gaagtttaac cactgattcg acctgatatt cttcgggcaa caaagcgatt tcatcttccg
    16741 gcatttgccc tttcagcgcg tagaaacggc cttgctcacc aggaagatgg tggcaccagc
    16801 tcaccatatc gttcagagag gcaaaagcgc ggctaattac gccatcaaat ggcggctctg
    16861 aaggaaactc ttctaccctg ctctgtactg gttcaatatt ctccagttta agctcatgtt
    16921 gcacctgacg aaggaaacgc acgcgtttac caaggctatc caacagagtg aaatgggctt
    16981 caggacgcac gatagagagt ggaatgcctg gcagtcctgg tccggtgccg acatcgataa
    17041 accgttcacc ttgcagatac ggtgccacca caatgctatc gagaatatgg cgtaccagca
    17101 tctcattagg atcgcggacc gaagtcaggt tgtacgcttt gttccattta tgcagcatat
    17161 tcacgtaggc aataagctgg tttttctggt gatcggtaag cgaaatacct gcgtctttca
    17221 gcagtaagga gagtttgttg agcacggtga ttacctgttc ttgatgcgtt atgcgctacg
    17281 acgcagcata ccctgttttt tcagccacac cagcagaatg gagatggccg caggcgtgac
    17341 gccagaaata cgcgaagctt ggccgataga ggctggtttg tgatcgttaa gtttggcgat
    17401 cacttcgtta gaaagaccgg atacctggcg gtaatccagt gtcgcgggta gcagggtgtt
    17461 ctcgttacgc agctgctttt cgatctcatc ttgctggcgc gcgatataac cttcgtattt
    17521 aacctgaatc tcaacctgtt ccgccgcctg ttcgtctgtc aacgcagggg caaacggcgt
    17581 cagcgtggtt aatttttcat aagtcatttc cggacgacgc agcagatctt caccactggc
    17641 ttcacgggaa agcggcgcag tcaggtgagc attcacttcg gctgcagctt ccgccgacgg
    17701 ggttacccag gtcgatttca gacgctgacg ctcacgctcg atattctcaa gtttctcgtt
    17761 aaagcgcgcc caacgttcgt catccaccag gcccagttca cgaccgattt cagtcaaacg
    17821 caaatccgca ttatcttcgc gtagcatcag acgatattct gcgcgcgaag taaacatacg
    17881 atacggttct ttggttccta aagtgcacag gtcatcaact agtacgccga gatacgcctg
    17941 agaacgtgcc ggagcccaac cttctttgtc agcagacaga cgggcagcgt taagaccggc
    18001 cagcaaacct tgcgcagcgg cttcttcgta accggtagtg ccgttaatct gaccagcaaa
    18061 gaacagcccc tggataaact tgctctccag cgtcggtttc aggtcgcgag gatcgaagaa
    18121 gtcatactca atggcataac ccggacgcac gatcttcgcg ttttccatcc cctgcataga
    18181 gcggacgatt tgcatctgca catcgaacgg caggctggtg gagataccgt tcggataaat
    18241 ttcattagag gtcagtcctt ccggttcaag gaagatctga tgctgatttc tgtcggcgaa
    18301 gcgcatgact ttgtcttcga tcgacgggca gtagcgtggg ccgacacctt cgatcacccc
    18361 tgcatacatt gggctacgat cgaggttact gcggatcaca tcatgggttt tctcgttggt
    18421 atgagtgata taacacggca cctgctgggg atgctgggac gcattgccca taaacgagaa
    18481 taccggcatt gggttaccgc catgctgttg cgccagcaca ctaaagtcga tagttcgagc
    18541 atcaatacgc ggtggtgtcc cggttttcag acgaccaacg cgcagcggca gttcacgcaa
    18601 acggcgagaa agcggaatgg acggcggatc accagcacgg ccaccgctgt aattatccag
    18661 accgatatga attttaccgt cgaggaacgt cccaacggtg agcacgacgg ctttggcacg
    18721 gaacttcagt cccatttggg taacagcacc gaccactcga tcgttttcga caataagatc
    18781 ttcaaccgcc tgctggaaga tcatcaggtt cggttggttc tccagcgccg tacgtaccgc
    18841 ctgacggtag agcacacgat ccgcctgagc tcgggtagcg cgaaccgccg gtcctttgct
    18901 tgcgtttagt atcctaaact ggatacccgc ttgatcgatc gctttcgcca tcagaccgcc
    18961 gagtgcatcc acttctttta ccagatgtcc cttcccaata ccgccgatcg ccgggttgca
    19021 gctcatctgc cccagagtgt cgatattgtg tgtcaaaagc agagtctgtt gacccatacg
    19081 cgccgcggcc atcgcggcct cggtgcctgc atgacccccg ccaatgatga tgacgtcaaa
    19141 aggatccgga taaaacatgg tgattgcctc gcataacgcg gtatgaaaat ggattgaagc
    19201 ccgggccgtg gattctactc aactttgtcg gcttgagaaa gacctgggat cctgggtatt
    19261 aaaaagaaga tctatttatt tagagatctg ttctattgtg atctcttatt aggatcgcac
    19321 tgccctgtgg ataacaagga tccggctttt aagatcaaca acctggaaag gatcattaac
    19381 tgtgaatgat cggtgatcct ggaccgtata agctgggatc agaatgaggg gttatacaca
    19441 actcaaaaac tgaacaaccg ttgttccttg gataactacc ggttgatcca agcttcctga
    19501 cagagttatc cacagtagat cgcacgatct gtatacttat ttgagtaaat taatccacga
    19561 tcccagccat tcttctgccg gatcttccgg aatgtcgtga tcaagaatgt tgatcttcag
    19621 tgtttcgcct gtctgttttg caccggaatt tttgagttct gcctcgagtt tatcgatagc
    19681 cccacaaaag gtgtcatatt cacgactacc aataccgatt gcgccaaagc ggaccgcaga
    19741 aagatcgggc ttctgttcct gcaatgcttc atagaaagga gaaaggttgt ccggaatatc
    19801 tccggcaccg tgggtggagc tgataatcag ccagatcccc gaggcagata aatcttccaa
    19861 cagcggaccg tgcagcgttt cggtggtaaa acccgcctct tccagctttt cagccaagtg
    19921 ttctgctaca tattcggcac cgccgagggt gctgccgctg ataagagtga tatctgccat
    19981 aaaccgccac ctttattaag agtggcgtat tgtacgctgt gaacgcgttg ggatctacct
    20041 gtggaaaagt atgggattaa aaaagccgat cagggcttga tagtacgcat gatcgggttt
    20101 tgcaggacga tcaatgtctc ggtggactga atttcatcaa ttgtttggat cttgttgata
    20161 agtacatgct ggagagcgtc gatcgaacgg cacattactt ttataaagat gctgtagtgg
    20221 cctgttgtgt aataggcttc agtgacttca tcaaggcttt ccagctttgc cagcgcggaa
    20281 gggtagtctt tggcgctctt taatataatg ccgataaagc agcctacgtc ataaccgagc
    20341 tgcttcgggc tgacatcaat acgcgccccg gtaatgatcc ccgcctgctt cattttctct
    20401 acccgaacgt gaatcgtccc cggactgacg ccaaattgtt tcgccagttc ggcgtaagcg
    20461 gtgcgcgcat tgcccattaa tgcttccagg attccacggt ccagattgtc gatcagataa
    20521 ttttccatag gattttctta tgcagattga tgattcattc tattttagcc ttctttttta
    20581 atgaatcaaa agtgtgttag gctttttatt gaatgattat tgcatgtgtg tcggtttttg
    20641 ttgcttaatc ataagcaaca ggacgcagga gtataaaaaa tgaaaaccgc ttacattgcc
    20701 aaacaacgcc aaattagctt cgtgaaatct cacttttctc gtcaactgga agaatgtctg
    20761 gggctgatcg aagtccaggc accgattctt agccgtgtgg gggatggcac gcaggataac
    20821 ttgtcgggct gtgaaaaagc ggtgcaggta aaagtgaaag ctctgcctga tgcccagttc
    20881 gaagtggttc attcactggc gaagtggaaa cgtcagacct tagggcaaca cgacttcagc
    20941 gcgggcgaag ggctgtacac gcacatgaaa gcccttcgcc ccgatgaaga ccgtctttct
    21001 ccgttgcact cggtctatgt agaccagtgg gactgggaac gcgtaatggg cgacggtgag
    21061 cgtcaattct cgactctgaa aagcacggta gaggcgatct gggcgggaat taaagcaacc
    21121 gaagctgcgg ttagcgaaga gtttggcctg gcaccgttcc tgccggatca gatccacttc
    21181 gtacacagcc aggagttact gtctcgttat ccggatctcg atgccaaagg gcgtgagcgg
    21241 gcgatagcga aagatcttgg cgcggtattc cttgtcggga ttggcggcaa gctgagcgat
    21301 ggtcatcgcc acgacgtgcg cgcaccggat tatgatgact ggagcacccc gtcagagctg
    21361 ggtcatgcgg gtctgaacgg cgatattctg gtgtggaacc ctgtactgga agatgcgttt
    21421 gagctttctt ccatggggat ccgcgtggat gccgacacgc tgaagcatca gctggcgctg
    21481 accggtgatg aagatcgtct gcagctggaa tggcatcagg cgctgctgcg cggtgaaatg
    21541 ccgcagacca tcggcggcgg tatcggccag tctcgtttga ctatgctgct gctgcaactg
    21601 ccgcatatcg gccaggttca gtgtggagta tggccagctg ctgttcgcga gagcgtccct
    21661 tctctgctgt aataatttat cgccgccagc gtctgagcag gcggcttcgc atcccggtat
    21721 caaagcgcca gatatgatcg aaaatgcgca tgatgccggg tttgccgtgt gccgacatcg
    21781 ccacggcatg aaagcgatgc tgatgtaccc gctgcagctc tttcacttta ctcgtcacgt
    21841 cgtcaggcaa ccgctgagcg ataaaatcag aaatcaccac cgcatcggca tcaaaccatt
    21901 ccctgctttg caagcgttcc ataatggcgc gaaaacaact ggcaagatcg gtgccgccac
    21961 gaaactgctg gcttaaaaaa cggattgctt gttcgatgcc ttgtgggcct gaaagctcat
    22021 aacggacgat ctcggtggaa aatagcataa tatagcagcg ccggttttct gcgagagcaa
    22081 tgcgcatcaa ggccaggcag aacgctttcg cacactgttc attaaagccg cccattgagc
    22141 cggaagcatc cacacagaca ataaacggcc cgcgcggctg ttcatcgtaa tctttatgta
    22201 ccaccggacg ttcgatcact ttttcacgcc acgactcacc gtgcaggcga taggtgagca
    22261 actgtttttc caccagccga cggtaaaact catactccag ttccgttatc cctagtgtcg
    22321 ccagttctgg cggcaggaga cgtaaaatat catcgctttg ttgcagacca tcaacttgct
    22381 caggaaccgt cgccggttcg cgcaccatgg tgcggaaggt ttccatctgc gcatcgttgc
    22441 gcggtattga tttggcttcc cgagaacgcc ccagctgctc tgccaggcgt ttcagttccg
    22501 gctgttcgtt aagaaattca ccgtatttca caatcaactg atagtcgcca cgtttaagct
    22561 ggccggcgct catatcccac agacgaccag ctgcggtatt gttatctgcg agaatcggtt
    22621 caagttgtcc gctcagcgtc atgcgttcct gaacttcact taacagttgt tcgcgttctt
    22681 cttctaatag ctgttgattt aacgtcgttg cttgcacgat cagacttaaa cgccagcgct
    22741 ggagaaaaag cgtgtgtaac gctgaagtta ttgtgctgtt agcatcaacc aactgccggg
    22801 cttgttctgc ccatggggaa ttcagacgat gcagtaagtc caggatctgt ggtagctgca
    22861 caataaactg cggcgtggag aggagctggc tttgctgata gcacatcacc tcttcggtga
    22921 gttctggcgg gactcgggca tctttcagcc gactgcgcag cgcctcacgc cagcggggaa
    22981 catcatcagt gattgctgcc ttcagtcgtg ggaatttttc aaagaagacc gccagctgcg
    23041 gtgaggccag cagtgcgatg atcatctctt cgatcaatcc ctcttcgctg acggccagca
    23101 tcacattaag cgtatccagc gttagcattg ttgtgcctgg cgaatctgtg caccgacatc
    23161 ctgtaggctg gcttcaatgc gacctaacca gtcgccaggg ataaacagac atttttgctg
    23221 ttcgctgaat aaagcgtgtt gcttacgcca gtcgctttca agctcttcca gttgttgttt
    23281 tatttcacct ggcagacctt cagccgatga accgggaagt gccagcgtac tgccttgtaa
    23341 acttacatcg cgtacaacaa gatgttgggt gctatcaact tccagattca gtttctgggc
    23401 aaagccgata ccgttcagtt tgccgcgaat ttcaccacct ttactcagcc actgttccag
    23461 cgcgctacgc tcaaaggaga tatgaaccac ttccatatca tgcagtttta acggtttttg
    23521 cagcagcaga gtcagagtgg aagcagtaac gttaacaggg agttgatact gctgacgacg
    23581 gctaaaaatg ccgcccagac gaattaccgt taaggctgtt ttatcgcttt gttgctgctg
    23641 aagttgcagg tgacgttgca caatcgcgcc caggcgggtc aacatccctt gctgttgcca
    23701 ggcgtgaccg gtcatcaata catcaatttg ttgttgtatc aaattcaggc tttgcgcgtc
    23761 ataccacagg caatctttca gcaaaatgag atctaccggg gcaacagcac tgcgaccgct
    23821 aaaaaaggcg ctggcctgca ataatcggat cgcttttttc cagcgacgat ccgagacata
    23881 aggcgcatcc ggtaatttat ccagttgctg gcgcagcata aaaatcagct caaatacatg
    23941 atcgggcagc gtaatttcac caatctcttt ctgccagcgt tcatattctt catctgtgac
    24001 ctgcaaggca tcaggaaccg gattgtcgtt ttcatcctgt tgactggtca gcatggagcg
    24061 gaaattcgct ttatcctgca ctttatctaa ccacagacga atcagcatgc ggtcatataa
    24121 cgcttccaga ctgctgtctg cttccggcag ctcgttggag gccgccacca gcagacgcat
    24181 cgggattttt tctacgtgtg caccgttgcg gaactggcgc tcgttaatgg cggtgagcaa
    24241 ggtattaaga attgccgggc ccgctttcca gatctcatcc agaaagacaa tttctgcttc
    24301 cggcaggtaa ccgctggtta aacgttcata gcgcccttca tcttttagcg cctgaataga
    24361 aaggggacca aaaacttctt ccggcgtgga gaagcgggtc atcagatatt caaacgcgcg
    24421 ggcattctga aaggcgaatt ttaagcgccg ggcgatcaaa cttttggcaa tacctggcgg
    24481 gccaaggagg aacacacttt caccacttaa tgccgctaat aaacacaagc ggatggcgtg
    24541 gctacgttca taaagccctt ttccaacgaa ctgctcaggc gggaaattct ttccgctaat
    24601 aaatgagggt gagccataat gaagtggcgt cctttcgtca aaagttctgc gtaaattgcg
    24661 agtatagacg tttcttgctg gtggctaaaa tagtctcaaa ggggggtaat gccagtcagt
    24721 taagcaactg actggctctt tttcggggct gtggggtatt tccagggcct ctcctttacc
    24781 actctcggga aggccctt
//
LOCUS       DADMHC010000044        24220 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.044, whole genome shotgun sequence.
ACCESSION   DADMHC010000044 DADMHC010000000
VERSION     DADMHC010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 24220)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24220)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24220
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.044"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(130..1140)
                     /locus_tag="JNZ57_001477"
     CDS             complement(130..1140)
                     /locus_tag="JNZ57_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001494590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HAY8827748.1"
                     /translation="MDKITQVLFSDIGKVTTQYVEVPHQELKPHEVRIAPVFYGICGS
                     DLHVLKGGHPFAKPPVVPGHEIAARVTEVGSDVKNVQPGDHVVVDPIMACMECRACKA
                     GRFNLCEPPQVASFRAPGFARSQHIVPARNCHVAPASLPLKVLAFAEPAACARHCVNR
                     MPKASLESVLVIGAGTIGLSIVQALRIMGAGKITVIEPDAAKRALALKLGAAEVWALG
                     ELAADVRFTGAIDVVAAQATLNDACTRVYAGGTVVCMGVPSGPREIPLPMMQRFERDL
                     LNSGMYIPEDFDAVIEWLADGRFDTSELVTDLFAIEDAAAAFERAQQNDSIKVMLQFA
                     PE"
     gene            complement(1173..2060)
                     /locus_tag="JNZ57_001478"
     CDS             complement(1173..2060)
                     /locus_tag="JNZ57_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008786992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HAY8827749.1"
                     /translation="MSSHFTPFTLKDISRPGGGFAMLAVDQREAMRLMFAAAGQPKPI
                     ADSVLTDFKVAATRILSPYASAVLADKQFCLEQIVEQGAVANSCGLIVAADLFIPGNG
                     IPVDSVEIDMSVDPHKAREMGAKAMKLLVLWREDEPAEERLAMVDKFVRRCRSAGLVS
                     IIEPVVRPPRRGWDFDRESAIVAAAAELGGTEADLYKAEMPLGGKGDEKTLLAACQQL
                     NDQMKMPWVILSSGVDADIFGRAVSIAMKGGASGFLAGRAVWASVVGAQDPQTMLRDV
                     SVPRLQRLAEIVDEGIAQR"
     gene            complement(2085..2963)
                     /gene="yihU"
                     /locus_tag="JNZ57_001479"
                     /pseudo
     CDS             complement(2085..2963)
                     /gene="yihU"
                     /locus_tag="JNZ57_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001318159.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sulfolactaldehyde 3-reductase"
     gene            3136..4032
                     /locus_tag="JNZ57_001480"
     CDS             3136..4032
                     /locus_tag="JNZ57_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000196715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY8827750.1"
                     /translation="MTRIACVGITVQDRIYSLPTLPEGGGKYQANHYLEIGGGPAATA
                     AVAIAKLGVEVDFIGRVGDDSCGNTLLAELEGWGVNTAFCRRYPNARSSQSAILVDQH
                     GERIIVNYPSPDLGTDAEWLEAIDFSRYDLILADVRWHSGTEKAFSLACLAGVTTLLD
                     ADMTPQDISPLVALADHAVFSTPGLKRMTGLQSPEEGLFQATTQTAGKVYVTLGSEGS
                     LWIEDGHLCQQEAFSVNVVDTTGAGDVFHGALAVALAEKMPTKEAIRFASAVAAMKCT
                     QPGGRAGIPNREQTESFLSLYA"
     gene            4072..4860
                     /locus_tag="JNZ57_001481"
     CDS             4072..4860
                     /locus_tag="JNZ57_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000022208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY8827751.1"
                     /translation="MSIIEVTGNPRHDQLVHLIAERGYMNIEELAQLLDVSTQTVRRD
                     IRKLSEQGLITRHHGGAGRVSSVMNTAFEQRELSLTAEKRAIAEAVADYLPERCTVFI
                     TIGTTVEAVARALLNRRDLRIITNSLRVAQILYKNQDIEVMVPGGTLRAHNGGIIGPG
                     AVDFIEGFRADYLITSIGAIEHDGTLLEFDVNEALVARTMIKHARNTLLVADHTKFAA
                     SAAVSIGNARNVRAFFTDAPPPNSFCQLLSEENVELVVAEQEVS"
     gene            complement(4966..6789)
                     /gene="typA"
                     /locus_tag="JNZ57_001482"
     CDS             complement(4966..6789)
                     /gene="typA"
                     /locus_tag="JNZ57_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000570679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-dependent GTPase TypA"
                     /protein_id="HAY8827752.1"
                     /translation="MIEKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMD
                     SNDLEKERGITILAKNTAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAF
                     DGPMPQTRFVTKKAFAYGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDF
                     PIVYASALNGIAGLDHEDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYV
                     GVIGIGRIKRGKVKPNQQVTIIDSEGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAI
                     TGLGELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDR
                     LNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREI
                     DGRKQEPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDYVIPSRGLIG
                     FRSEFMTMTSGTGLLYSTFSHYDDVRPGEVGQRQNGVLISNGQGKAVAFALFGLQDRG
                     KLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKLTNMRASGTDEAVVLVPPIRMTLE
                     QALEFIDDDELVEVTPTSIRIRKRHLTENDRRRANRAPKDY"
     gene            7162..8571
                     /gene="glnA"
                     /locus_tag="JNZ57_001483"
     CDS             7162..8571
                     /gene="glnA"
                     /locus_tag="JNZ57_001483"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--ammonia ligase"
                     /protein_id="HAY8827753.1"
                     /translation="MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFF
                     EEGKMFDGSSIGGWKGINESDMVLMPDASTAVIDPFFADSTLIIRCDILEPGTLQGYD
                     RDPRSIAKRAEDYLRSTGIADTVLFGPEPEFFLFDDIRFGSSISGSHVAIDDIEGAWN
                     SSTQYEGGNKGHRPAVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAG
                     QNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLS
                     KNGVNLFAGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLA
                     YSARNRSASIRIPVVSSPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEA
                     MDKNLYDLPPEEAKEIPQVAGSLEEALNELDLDREFLKAGGVFTDEAIDAYIALRREE
                     DDRVRMTPHPVEFELYYSV"
     gene            8745..9794
                     /gene="glnL"
                     /locus_tag="JNZ57_001484"
     CDS             8745..9794
                     /gene="glnL"
                     /locus_tag="JNZ57_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(II)"
                     /protein_id="HAY8827754.1"
                     /translation="MATGTQPDAGQILNSLINSILLIDDNLEIHYANPAAQQLLAQSS
                     RKLFGTPLPELLSYFSLNIELMQESLEAGQGFTDNEVTLVIDGRSHILSVTAQRMPDG
                     MILLEMAPMDNQRRLSQEQLQHAQQVAARDLVRGLAHEIKNPLGCLRGAAQLLSKALP
                     DPSLLEYTKVIIEQADRLRNLVDRLLGPQLPGTRVTESIHKVAERVVTLVSMELPDNV
                     RLIRDYDPSLPELAHDPDQIEQVLLNIVRNALQALGPEGGEIILRTRTAFQLTLHGER
                     YRLAARIDVEDNGPGIPPHLQDTLFYPMVSGREGGTGLGLSIARNLIDQHSGKIEFTS
                     WPGHTEFSVYLPIRK"
     gene            9806..11215
                     /gene="glnG"
                     /locus_tag="JNZ57_001485"
     CDS             9806..11215
                     /gene="glnG"
                     /locus_tag="JNZ57_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(I)"
                     /protein_id="HAY8827755.1"
                     /translation="MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALA
                     SKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYL
                     PKPFDIDEAVALVERAISHYQEQQQPRNIQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
                     SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFT
                     GANTIRQGRFEQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRI
                     IAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELG
                     VEAKLLHPETETALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAE
                     STSQMQPDSWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAAR
                     LLGWGRNTLTRKLKELGME"
     gene            11326..11436
                     /gene="yshB"
                     /locus_tag="JNZ57_001486"
     CDS             11326..11436
                     /gene="yshB"
                     /locus_tag="JNZ57_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YshB family small membrane protein"
                     /protein_id="HAY8827756.1"
                     /translation="MLESIINLVSSGAVDSHTPQTAVAAVLCAAMIGLFS"
     gene            complement(11626..12999)
                     /gene="hemN"
                     /locus_tag="JNZ57_001487"
     CDS             complement(11626..12999)
                     /gene="hemN"
                     /locus_tag="JNZ57_001487"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HAY8827757.1"
                     /translation="MSVQQIDWDLALIQKYNYSGPRYTSYPTALEFSEDFGEQAFLQA
                     VARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAG
                     RHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLR
                     AEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT
                     PESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAF
                     LTQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGD
                     CYAQNQKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQW
                     DLHFADYFAEDLKLLAPLAKDGLVDVDEKGIQVTAKGRLLIRNICMCFDTYLRQKARM
                     QQFSRVI"
     gene            complement(13188..13697)
                     /gene="yihI"
                     /locus_tag="JNZ57_001488"
     CDS             complement(13188..13697)
                     /gene="yihI"
                     /locus_tag="JNZ57_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Der GTPase-activating protein YihI"
                     /protein_id="HAY8827758.1"
                     /translation="MKPSSSNSRSKGHAKARRKTREELDQEARDRKRQKKRRGHAPGS
                     RAAGGNTTSGSKGQNAPKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELL
                     ETDERLDALLERLEAGETLSAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQE
                     DMMRLLRGN"
     gene            14279..14911
                     /locus_tag="JNZ57_001489"
     CDS             14279..14911
                     /locus_tag="JNZ57_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HAY8827759.1"
                     /translation="MTNLNYQQTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALN
                     TLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEY
                     LEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLN
                     MVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQPVEETQDGE"
     gene            complement(15293..18079)
                     /gene="polA"
                     /locus_tag="JNZ57_001490"
     CDS             complement(15293..18079)
                     /gene="polA"
                     /locus_tag="JNZ57_001490"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HAY8827760.1"
                     /translation="MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLN
                     MLRSLIMQYKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAM
                     GLPLLAVSGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTIL
                     GPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEP
                     EKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELL
                     GLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTIL
                     DEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDA
                     PDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILN
                     SVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQL
                     HLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAEL
                     EKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLP
                     KVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVR
                     NEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAE
                     VFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGV
                     LEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADII
                     KRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPL
                     LVEVGSGENWDQAH"
     gene            18081..18323
                     /locus_tag="JNZ57_001491"
     CDS             18081..18323
                     /locus_tag="JNZ57_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827761.1"
                     /translation="MSVPVYQIMGKGCHRQDKNMSFSPLFVKIFCRSSGSLANRHVDN
                     FVHKLFTSLLIYYHAFYSMMFVFVFHVVKNKAIPNN"
     gene            18443..19375
                     /locus_tag="JNZ57_001492"
     CDS             18443..19375
                     /locus_tag="JNZ57_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HAY8827762.1"
                     /translation="MANLLNKFIMTRILAAITLLLSIVLTILVTIFCSVPIIIAGIVK
                     LLLPVPVIWRKVSRFCDFMMYCWCEGLAVLLHLNPLLQWEVHGLEGLSKKNWYLLICN
                     HRSWADIVVLCVLFRKHIPMNKYFLKQQLAWVPFLGLACWALDMPFMKRYSRAYLLRH
                     PERRGKDVETTRRSCEKFRLHPTTIVNFVEGSRFTQEKHQQTHSTFQNLLPPKAAGIA
                     MALNVLGKQFDKLLNVTLCYPDNNRQPFFDMLSGKLTRIVVHVDLQPIADELHGDYIN
                     DKSFKRHFQQWLNSLWQEKDRLLTSLMSSQRQDK"
     gene            complement(19416..20846)
                     /locus_tag="JNZ57_001493"
     CDS             complement(19416..20846)
                     /locus_tag="JNZ57_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312811.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HAY8827763.1"
                     /translation="MIRKSATGVIVALAVIWGGGTWYTGTQIQPGVEKFIKDFNDAKK
                     KGEHAYDMTLSYKNFDKGFFNSHFQMQISFDNGAPDLNIKPGQKVAFDVDVEHGPLPI
                     TMLMHGNVIPALAAAKVNLVNNELTQPLFIAAKNKSPVEATLRFAFGGSFSTTLDVAP
                     AEYGKFSFGEGQFTFNGDGSSLSNLDIEGKVEDIVLQLSPMNKVTAKSFTIDSLTRLE
                     EKKFPVGESESKFNQVNIINQGEDVAQIDAFVAKTRLDRVKDKDYINVNLTYELDKLT
                     KGNQQLGSGEWSLIAESIDPSAVRQFIIQYNIAMQKQLAGHPELANDEVALQEVNAAL
                     FKEYLPLLQQSEPTIKQPVRWKNALGELNANLDISIADPAKSSSSTNKDIKSLNFDVK
                     LPLNVVTETAKQLNLSEGMDAEKAQKRADKQISGMMTLGQMFQLITIDNNTAPLQLRY
                     TPGKVVFNGQEMSEEEFMSRAGRFVH"
     gene            complement(21001..21627)
                     /gene="dsbA"
                     /locus_tag="JNZ57_001494"
     CDS             complement(21001..21627)
                     /gene="dsbA"
                     /locus_tag="JNZ57_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA"
                     /protein_id="HAY8827764.1"
                     /translation="MKKIWLALAGLVLAFSASAAQYEDGKQYTTLEKPVAGAPQVLEF
                     FSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQAWAVAMALG
                     VEDKVTVPLFEGVQKTQTIRSASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKA
                     AADVQLRGVPAMFVNGKYQLNPQGMDTSNMDVFVQQYADTVKYLSEKK"
     gene            complement(21644..22630)
                     /gene="srkA"
                     /locus_tag="JNZ57_001495"
     CDS             complement(21644..22630)
                     /gene="srkA"
                     /locus_tag="JNZ57_001495"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response kinase SrkA"
                     /protein_id="HAY8827765.1"
                     /translation="MNNSAFTFQTLHPDTIMDALFEQGIRVDSGLTPLNSYENRVYQF
                     QDEDRRRIVVKFYRPERWTADQILGEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFY
                     FAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLF
                     EDATLIPSGLKAAFLKATDELIAAVTAHWREDSTVLRLHGDCHAGNILWRDGPMFVDL
                     DDARNGPAIQDLWMLLNGDKAEQRMQLETIIEAYEEFSEFDTAEIGLIEPLRAMRLVY
                     YLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKVLQEPPLQLTPMY"
     gene            complement(22707..22976)
                     /locus_tag="JNZ57_001496"
     CDS             complement(22707..22976)
                     /locus_tag="JNZ57_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihD family protein"
                     /protein_id="HAY8827766.1"
                     /translation="MKCKRLNEVIEFLQPAWQKEPDLNLLQFLQKLAKESGFDGELAD
                     LTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE"
     gene            23046..23630
                     /gene="mobA"
                     /locus_tag="JNZ57_001497"
     CDS             23046..23630
                     /gene="mobA"
                     /locus_tag="JNZ57_001497"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase MobA"
                     /protein_id="HAY8827767.1"
                     /translation="MNLMTTITGVVLAGGKARRMGGVDKGLLELNGKPLWQHVADALM
                     TQLSHVVVNANRHQEIYQASGLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDT
                     PYIPPDLAARLNHQRKDAPVVWVHDGERDHPTIALVNRAIEPLLLEYLQAGERRVMAF
                     MRLAGGHAVDFSDHKDAFVNVNTPEELARWQEKR"
     gene            23612..24139
                     /gene="mobB"
                     /locus_tag="JNZ57_001498"
     CDS             23612..24139
                     /gene="mobB"
                     /locus_tag="JNZ57_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418293.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HAY8827768.1"
                     /translation="MAGKTMIPLLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHT
                     HHDMDVDKPGKDSYELRKAGAAQTIVASQQRWALMTETPDEEELDLQFLASRMDTSKL
                     DLILVEGFKHEEIAKIVLFRDGAGHRPEELVIDRHVIAVASDVPLNLDVALLDINDVE
                     GLADFVVEWMQKQNG"
BASE COUNT         5914 a         6168 c         5910 g         6228 t
ORIGIN      
        1 atcaattacg tcctgtggcc gactaattga ataagttgca ggactggtga tttgactcat
       61 cgcagtgtcc tttttaattg ttgtagggtg gcgctgacgt gacgcagcgc cagacagaga
      121 tttagaaaat cattccggcg caaattgcag catgaccttt atggagtcat tttgctgcgc
      181 gcgttcaaat gccgccgctg catcctcaat ggcaaataaa tcggtaacca gttcactggt
      241 atcaaaccgc ccatccgcca gccattcgat aacagcatcg aaatcttcag ggatgtacat
      301 gccagagttg agcaagtcac gctcgaaacg ttgcatcatc ggtaatggta tttcacgcgg
      361 cccacttggt acgcccatgc acacgacggt gcctccggca tatacacggg tacatgcatc
      421 gttaagcgtg gcctgcgctg caacgacatc aatcgccccc gtaaatcgca catctgcggc
      481 cagctcacct agtgcccaaa cttctgctgc gcccagcttt aacgccagcg cgcgtttggc
      541 agcgtcaggt tcaatcacgg taatcttacc tgcccccata atgcgcagtg cctgcacgat
      601 ggataagcct atcgttccgg caccaattac cagtacgctt tccagagaag ctttcggcat
      661 tcggttaacg cagtgacggg cacaagccgc cggttcggca aaggccaaca cttttagcgg
      721 taaagaggct ggtgcgacat ggcaattacg cgcaggaaca atgtgttgtg agcgagcaaa
      781 gcccggtgcg cgaaaactag caacctgcgg tggttcacaa agattaaaac gtcctgcttt
      841 gcaggctcgg cattccatgc aagccatgat gggatcgacc acaacatgat cgcccggctg
      901 tacattttta acgtcgctgc caacttccgt aacgcgcgct gcaatttcat gaccggggac
      961 gacaggtggt ttggcaaacg gatgaccgcc tttcagaaca tgcagatccg aaccgcatat
     1021 cccatagaac acaggcgcaa tccgcacttc gtgcggttta agttcctggt gtggtacttc
     1081 aacatattga gtggtgactt tcccaatatc tgaaaataaa acctgggtaa ttttatccat
     1141 tgttattctc cagaatcgat atccataggg gattagcgtt gcgcgatacc ttcatcgaca
     1201 atttctgcca accgttgtaa acgaggaaca gagacatcgc gcagcatagt ttgtggatct
     1261 tgtgcaccaa caaccgacgc ccaaaccgct cgtccagcca ggaagcccga cgcaccacct
     1321 ttcatggcaa tacttactgc acggccaaaa atatcggcat caacgccaga agaaagaatt
     1381 acccacggca tcttcatctg atcgttaagt tgctgacagg cggcaagtaa ggttttttca
     1441 tcgcctttgc cccctaatgg catctcggct ttgtaaagat cagcctctgt tccaccaagc
     1501 tctgcggcgg cggcaacaat ggcgctttca cgatcaaagt cccaaccgcg acgaggtgga
     1561 cgcaccacag gttcaataat gctcaccagc ccggcactac ggcagcgacg aacaaattta
     1621 tcaaccattg ccagacgttc ctctgcgggt tcatcttcac gccagagtac aagtaatttc
     1681 attgccttag cccccatttc acgggcttta tgcgggtcga cggacatatc tatttcaacg
     1741 ctatcaaccg ggatgccatt acctgggata aaaagatcgg cagcgacaat caggccgcaa
     1801 gaattagcaa cagcgccctg ctcgactatt tgctcaagac aaaattgttt atccgccaga
     1861 acggcagaag cataaggaga aaggattcgg gtcgcggcaa ctttaaaatc ggtgagtaca
     1921 ctgtcggcga tgggttttgg ctgccctgct gccgcaaaca tcaagcgcat ggcctcacgc
     1981 tgatcgacag ctaacatggc aaatccacca cctgggcggg agatatcttt cagcgtaaat
     2041 ggggtgaagt gggatgacat agaaactcct gttaatagat aaaattaaag accagcctgc
     2101 tggcgaacct gatttagcag ggcactccag tcctgccgcc ctttgccgtc ttgacttgct
     2161 gcagcgtaat aactttctgc tgcaatcccc atattgagcg gtgcccccgt ctcccgagcg
     2221 acgtcaactg caatacgcag atctttcaac gccagatcca ccatgaaggc gggtgaaaga
     2281 tcgcctttca gcactttgcc aggccaggtg gtcgtaaaat gtcctttccc tgctgccgta
     2341 ccactcatca ccttaattgc gacatcaaga tttaatccca gtgactcaca taacacagcg
     2401 gcctcggagg acagcgcatt aagcgcaatg ctcatatagt tgttaattag cttcacgcgg
     2461 atccccattc ctgggccgcc cagcctcgac cagctcatta cccatgcaca taagaatcgg
     2521 gcgtgcacgt gcaatctgct catcagtgcc acccgctaaa atcagcaatg tgccatcaat
     2581 cgcattcacg gacgttctgc ccacgggagc gtccatcata ctgatgcctt tttcttgtaa
     2641 ctcccgtatt aatgcatcgg tctgtaaggg atgaatagtc gacatatcaa tcaataacgc
     2701 gtcagatgaa acagcctcac agacgccttt ttccccaaca gaacctgtcg aacaatgtca
     2761 ccattgggaa gcatagtgat gataaattca gcgcctgctg ctgcttccgc tggggtttgt
     2821 gccgcagtgg ccccctgcgt aactagcgca tcgacggcct gtgcattgac atcaaatacc
     2881 tgcaatgaat gccctttttg caatagattg ttagccattg ggctacccat ctgccccagc
     2941 ccgagaaatg caatggttgc catgaatact ctcctgtctg acattgacaa aataatgaca
     3001 attgaaaatt cgttttcgtc tttttttgag catatttgta atttatgttc aaaaacacga
     3061 cacgcatcac taatttgatc atttgcgtca tttaaattga ccaaagacga caaaattaaa
     3121 caggacaaga caaatatgac cagaattgca tgcgtgggta tcacagttca ggacagaatt
     3181 tattctttgc ccactctgcc ggagggcggc gggaaatatc aggcaaatca ttatcttgag
     3241 attggtggcg gcccggcagc aacagccgct gttgcaatcg caaagcttgg cgtggaggtt
     3301 gatttcatcg gtcgcgtcgg cgatgacagt tgtggaaata ccttacttgc agaacttgag
     3361 ggttggggcg tcaataccgc attttgccgc cgatatccta acgcccgttc gtcgcaatca
     3421 gcgatcctcg ttgatcagca tggcgaacgg attatcgtta attatccaag tcctgatctc
     3481 ggtactgatg ccgaatggtt agaagcgatc gatttctctc gttatgatct gattctggcc
     3541 gatgttcgct ggcatagcgg tactgaaaaa gcattctcgc tagcgtgcct tgcgggtgtg
     3601 acaacgcttt tagacgccga tatgacaccg caggatattt ctccacttgt cgcgcttgcc
     3661 gatcacgccg tgttctcaac accagggctg aaacgcatga ctggcctgca gtcacctgaa
     3721 gaaggtttgt tccaggcaac gacacaaaca gcaggtaaag tgtatgttac gctgggttct
     3781 gaaggatcgt tgtggattga agatggtcat ttgtgtcaac aggaggcatt ttctgtcaat
     3841 gtggttgata ccactggagc aggcgatgtt tttcacggcg cactcgcggt agcgttggca
     3901 gaaaaaatgc caacaaaaga ggctattcgt tttgccagtg cggttgccgc gatgaaatgt
     3961 acccagcctg gcggtcgggc cggcattcct aatcgtgagc aaaccgaatc atttttgtca
     4021 ctttatgcgt aaaatggtaa acatctaccg aggaggggca agggagtatt catgagtatc
     4081 atcgaagtga caggtaatcc acgccatgac caactcgttc atctaatcgc agaacgcggt
     4141 tatatgaata ttgaagaact ggcacaactg ctggatgttt caacgcaaac cgtgcgccgg
     4201 gatatccgaa aactcagtga gcagggcttg atcacccgtc atcatggagg ggccgggcgc
     4261 gtctccagcg tcatgaatac cgcttttgag caacgggaac tttcgctcac cgccgagaaa
     4321 cgggcgatcg ctgaggcagt cgccgattac cttcccgaac gctgtaccgt ctttatcacc
     4381 atcggtacaa ccgtagaagc cgttgccagg gcattactca accggcgtga tttacgcatt
     4441 atcactaaca gcctacgtgt ggcacagatt ctttataaga atcaggatat tgaagtgatg
     4501 gtgccgggag gcactttacg cgctcataac ggcgggatta tcggcccagg agccgtggat
     4561 tttattgaag gcttccgcgc agattattta atcaccagta taggtgccat tgaacatgac
     4621 ggcaccctac tggaatttga tgtaaatgaa gcgttagtcg cgagaacgat gattaaacat
     4681 gcgcggaata cattgttagt ggccgatcat acgaagtttg ccgcgtctgc tgccgtttca
     4741 attggcaatg cacggaatgt cagggctttt tttactgatg ccccgcctcc caattctttc
     4801 tgccagttgt taagtgaaga gaatgttgaa ctggtggttg ccgagcaaga agtatcctga
     4861 aattgaaatt tcggaaaatc cgctgggaat ttcagcggat tttgttttcc ataagcaaaa
     4921 aaaacctgcc agcgatggca ggttttttat aactaaaaaa cgaaattaat agtctttcgg
     4981 tgcgcggttg gcgcgacgac gatcgttttc cgtcaggtga cgtttacgaa tacggataga
     5041 ggtcggagtc acttctacca gttcgtcatc atcgatgaac tccagagctt gttccagagt
     5101 catgcggata ggcggaacca gaacaacggc ttcgtcagta ccggaagcac gcatgttggt
     5161 cagtttctta ccggtcaggc agtttacagt caggtcgtta gagcggctat gaataccgat
     5221 aatctgacct tcgtaaactt ctgcaccgtg accgaggaac agcttaccgc gatcctgcag
     5281 accgaacagc gcgaacgcga ccgctttacc ctgaccgtta gagatcagta cgccgttctg
     5341 acgctgaccc acttcacccg gacgtacgtc gtcgtagtgg ctgaaggtgg agtacagcag
     5401 accagtaccg gaagtcatgg tcatgaactc agaacggaag ccaatcagac cacggcttgg
     5461 gatcacgtag tcgagacgta cgcggccttt accgtctgga ttcatgtttt tcaggtcgcc
     5521 tttacgttcg cccagcgcct gcattacaga accctgatgc tgttcttcaa cgtccagagt
     5581 cacgttttca tatggctctt gtttacgacc gtcgatttca cggaagataa ctttcggacg
     5641 ggataccgcc agttcgaaac cttcacgacg catgttttcg atcagaacag acaggtgtag
     5701 ttcgccacga ccagaaacgc ggaacgcatc agcgtcttcg gtttcttcta cgcgcagcgc
     5761 aacgttgtgt accagttctt tgttcagacg atccaggatc tgacgagacg ttacgaactt
     5821 accttcttta ccgcagaacg gcgaggtgtt aacgcagaag aacatagaaa cggtcggctc
     5881 atcaacggag agtgccggca gcgcttcaac gttttgcgtg tcgcaaacgg tgtcagaaat
     5941 gttcagttcg ccaaggcccg tgatcgcaac gatatcgcca gcttccgcca ggtcggtttc
     6001 gatacgttcc agaccgaggt ggcccagcac tttaccgact ttcgcgttgc gggttttgcc
     6061 ttcgctatcg atgatagtga cctgctggtt cggcttcact ttaccgcgct tgatgcggcc
     6121 aatgccgata acgccaacat agctgttgta atcgagctga gaaatctgca tctggaacgg
     6181 accgtcaagg tcaacgtccg gcgcaggaac gtggtcaaca atcgcctggt acagcggggt
     6241 catgtcttcc gccatatctt cgtggtccag acccgcgata ccgttcagcg cagaagcgta
     6301 aacgatcggg aagtccagct gctcgtcggt cgcgtcgagg ttaacgaaca gatcgaatac
     6361 ctgatccaca acccaatcag gacgcgcgcc agggcggtca actttgttga taacaacaat
     6421 cggcttcagg ccgtaagcaa acgctttttt ggttacgaag cgcgtttgcg gcatcgggcc
     6481 gtcaaatgcg tcaaccacca gcagcactga gtctaccatg gacattacac gttcaacttc
     6541 accaccgaag tcggcgtgcc ccggggtatc aacgatgttg atacggtaat cattccattt
     6601 gatagcggtg tttttcgcga ggatggtaat cccacgctct ttctccaaat cgttggagtc
     6661 catcacgcgc tcttgggttt cggcacgaga gtcgaacgta ccggattgtt ggagcagctt
     6721 gtctaccagg gtggttttac catggtctac gtgcgcgatg atggcgatat tacgcaattt
     6781 ttcgatcaca actttgcctc aggcattaga aatagcgcgt tattgtacac ggattaatcg
     6841 cactacaaaa caggatcaca aacatcctcc gcaaacaagt attgcagagt ccctttgtga
     6901 tcgctttcac ggagcataaa aagggttatc caaaggtcat tgcaccaaca tggtgcttaa
     6961 tgtttccatt gaagcactat attggtgcaa cattcacatc gtggtgcagc ccttttgcac
     7021 gatggtgcgc atgataacgc cttttagggg caatttaaaa gttggcacag atttcgcttt
     7081 atctttttta cggcgacacg gccaaaataa ttgcagattt cgttaccacg acgaccatga
     7141 ccaatccagg agagttaaag tatgtccgct gaacacgtac tgacgatgct gaacgagcac
     7201 gaagtgaagt ttgttgattt gcgcttcacc gatactaaag gtaaagaaca gcacgtcact
     7261 atccctgctc atcaggtgaa tgctgaattc ttcgaagaag gcaaaatgtt tgacggctcc
     7321 tcgattggcg gctggaaagg cattaacgag tccgacatgg tgctgatgcc agacgcatcc
     7381 accgcagtga ttgacccgtt cttcgccgac tccaccctga ttatccgttg cgacatcctt
     7441 gaacctggca ccctgcaagg ctatgaccgt gacccgcgct ccattgcgaa gcgcgccgaa
     7501 gattacctgc gttccactgg cattgccgac accgtactgt tcgggccaga acctgaattc
     7561 ttcctgttcg atgacatccg tttcggatca tctatctccg gttcccacgt tgctatcgac
     7621 gatatcgaag gcgcatggaa ctcctccacc caatacgaag gtggtaacaa aggtcaccgt
     7681 ccggcagtga aaggcggtta cttcccggtt ccaccggtag actcggctca ggatattcgt
     7741 tctgaaatgt gtctggtgat ggaacagatg ggtctggtgg ttgaagccca tcaccacgaa
     7801 gtagcgactg ctggtcagaa cgaagtggct acccgcttca ataccatgac caaaaaagct
     7861 gacgaaattc agatctacaa atatgttgtg cacaacgtag cgcaccgctt cggtaaaacc
     7921 gcgaccttta tgccaaaacc gatgttcggt gataacggct ccggtatgca ctgccacatg
     7981 tctctgtcta aaaacggcgt taacctgttc gcaggcgaca aatacgcagg tctgtctgag
     8041 caggcgctgt actacattgg cggcgtaatc aaacacgcta aagcgattaa cgccctggca
     8101 aacccgacca ccaactctta taagcgtctg gtcccgggct atgaagcacc ggtaatgctg
     8161 gcttactctg cgcgtaaccg ttctgcgtct atccgtattc cggtggtttc ttctccgaaa
     8221 gcacgtcgta tcgaagtacg tttcccggat ccggcagcta acccgtacct gtgctttgct
     8281 gccctgctga tggccggtct tgatggtatc aagaacaaga tccatccggg tgaagccatg
     8341 gacaaaaacc tgtatgacct gccgccagaa gaagcgaaag agatcccaca ggttgcaggc
     8401 tctctggaag aagcactgaa cgaactggat ctggaccgcg agttcctgaa agccggtggc
     8461 gtgttcactg acgaagcaat tgatgcgtac atcgctctgc gtcgcgaaga agatgaccgc
     8521 gtgcgtatga ctccgcatcc ggtagagttt gagctgtact acagcgtcta atagttgaag
     8581 ttgtactacc cggcgcaaca acgccgggat ttagttgccg tggaaacttt cagcccatct
     8641 ctgcatgggc ttttttctcc gtcaattctc tgatgcttcg cgctttttat ccgtaaaaag
     8701 ctataatgca ctaaaatggt gcaacctgtt caggagactg ctttatggca acaggcacgc
     8761 agcccgatgc tgggcagatc ctcaactcgc tgattaacag tattttgtta atcgatgaca
     8821 acctggagat ccattacgcc aaccctgccg cgcaacaact gctcgcccaa agctcccgca
     8881 aattgtttgg tacaccgtta ccggaactgt tgagctactt ctcattaaat atcgagctga
     8941 tgcaagaaag tctggaggcg gggcaaggtt ttaccgataa cgaagtgacg ctggtcatcg
     9001 acgggcgctc gcatatcctt tctgtgacgg cccagcgtat gccggacggc atgatcctgc
     9061 tggagatggc tccgatggat aaccagcgcc gcttaagtca ggaacagcta cagcacgccc
     9121 agcaggttgc tgcccgtgat ttagtgcgcg gcctggcaca tgagattaaa aatccgcttg
     9181 gctgtttacg tggcgcggcg cagctgctca gcaaagcgtt acctgaccca tcactactcg
     9241 aatataccaa agtgattatc gaacaggcgg accggctgcg aaatctggtc gaccgtctgt
     9301 tggggccgca gctgcccggt acgcgcgtta ccgaaagtat tcacaaagtg gctgaacgcg
     9361 tggtaacgct ggtgtcgatg gaactgccgg acaacgtgcg gttgattcgt gattacgatc
     9421 ccagcctgcc ggaactggcg cacgacccgg atcaaattga acaggtcttg ctgaatattg
     9481 tgcgcaatgc gctacaggcg ctggggccgg aaggcggtga aatcattctg cgtacccgca
     9541 ccgcgtttca actgacctta cacggcgagc gctaccggct ggcggcgcgg attgatgtgg
     9601 aagataacgg gccgggcatt ccgcctcatt tgcaggatac gctgttttac ccgatggtca
     9661 gcggccgcga aggtggcacc gggcttggct tatccatcgc ccgtaatttg attgatcagc
     9721 attcaggcaa aattgaattt accagttggc caggtcatac cgagttctcg gtttacctgc
     9781 ctatcaggaa ataaaggtga cgtttatgca acgagggata gtctgggtag tcgatgacga
     9841 tagttccatc cgttgggtgc ttgaacgtgc gctcgctgga gcgggtttaa cctgtacgac
     9901 atttgagaac ggcgcggaag tactggaggc gctggcgagc aaaacgccgg atgtgctgct
     9961 ttcagatatc cgtatgccgg gaatggacgg gctggcgctg ctcaagcaga ttaaacagcg
    10021 ccatccaatg cttccggtca tcattatgac cgcacattcc gatctggatg ctgccgtcag
    10081 cgcctatcaa caaggggcgt ttgattatct gcccaaaccg tttgatatcg acgaagccgt
    10141 ggcgctggtt gagcgcgcta tcagtcatta ccaggaacag cagcagccgc gtaatattca
    10201 gcttaacggc ccaacgaccg atatcatcgg cgaagcgcca gccatgcagg acgtgttccg
    10261 tattatcggt cggctttcgc gttcttctat tagcgtgctg attaacggcg aatccggcac
    10321 cggtaaagaa ctggtcgctc atgccctgca tcgccacagt ccgcgcgcca aagcgccgtt
    10381 tatcgcgctg aatatggcag ctatcccaaa agatttgatc gaatcagaac tgtttggcca
    10441 cgagaaaggc gcgtttactg gcgcgaatac cattcgtcag gggcgttttg aacaggccga
    10501 tggcggtaca ttattcctcg acgaaattgg tgatatgccg ctggatgtgc agacgcgttt
    10561 gctgcgcgtg ctggcagacg gtcagtttta ccgcgttggc ggctatgcgc cggtgaaagt
    10621 ggatgtgcgg attatcgctg ccactcacca gaatctcgaa cagcgagtgc aggaaggtaa
    10681 gttccgtgag gatctgttcc accgcctaaa cgttatccgc gttcatctgc cgccgctgcg
    10741 cgaacgtcgg gaagatattc cccgtctggc gcgccatttt ttacaggttg ccgcgcgcga
    10801 actgggcgta gaagcgaagt tactgcatcc ggaaaccgaa actgctctga cgcgtctggc
    10861 gtggccaggc aacgtgcgcc agctggaaaa cacctgccgc tggctaacgg tgatggccgc
    10921 cgggcaggaa gtgttgattc aggatttgcc cggcgaactg tttgaatcaa cggttgcgga
    10981 gagtacttcg caaatgcaac cggacagctg ggcgacgctt cttgcgcagt gggcagacag
    11041 agcgctgcgt tccggtcatc aaaatctgct ttccgaagcg cagccagagc tggagcggac
    11101 gttactgacg accgcgttgc gacatacgca ggggcataaa caggaagcgg cgcggctact
    11161 cggctggggc cgcaacaccc tgacgcgtaa gttaaaagag ctggggatgg agtgattcac
    11221 agcttgtgtg taaagattga ttattgagcg caaattgctg gtattttacg ctttactgtt
    11281 ccgataagtt cagtatgatc tgcccggaaa acggggagag tcattatgct ggaatcaata
    11341 attaatctgg tatcgagtgg cgcagttgac agccacacac cgcaaactgc cgttgctgcc
    11401 gtgctgtgtg ccgcaatgat tgggctgttt agttgagttt cagattgctg atgaagtgct
    11461 ctttgttcat gccggatgcg gcgtgaacgc cttatccggc ctacaaaagc aatattttca
    11521 acaggttttg taggcctgat aagcgtagcg catcaggcaa tcttgttctc agcacattga
    11581 tggcgctttc gttttctact ttgtaaacga agcgccattc actattcaaa tcacccgtga
    11641 gaactgctgc atccgcgctt tctggcgcag ataggtatca aagcacatgc aaatgttgcg
    11701 gatcagcaag cgacctttcg ccgtcacctg tattcccttc tcatccacat ccaccagccc
    11761 atcttttgct aacggggcga gcagcttgag atcttccgca aagtaatcag cgaagtgcaa
    11821 atcccactgt ttctcaatag gggcgtaatc cagacggaag ttgcagatga gcgacttaat
    11881 cacatcgcgg cgaatacagt catcacgcgt tagcgcaata ccacgccaca gcgcattgcc
    11941 ttgttcatcc acttgctgat agtactgctt caactctttc tggttctgcg cgtagcagtc
    12001 gccaatcatg ctgatggcgg aaacgcccat ccccagcaga tcggtatcgc cctgagtggt
    12061 gtagccctgg aagttacgat gcagcacgcc ttcacgctgg gccaccgcca gctcgtcatc
    12121 cggacgggca aagtgatcca taccgataaa ctgatagccc gattgcgtca ggaaggcgat
    12181 ggtttcctgc aggatatcga gtttttgctg cggactcggc aggtcagcat ctttgatttt
    12241 gcgctgagca gcaaaaatgg tcggcagatg cgcgtagtta aagacactca gacgatcggg
    12301 gttcagctcc gccacacgtt tcagggtaaa ggcgaaactc tccggcgtct gtttcggcag
    12361 gccgtaaatc aggtcgatgt tggtggaggt aaaaccaatc tcacgcgcat ggttaagcag
    12421 tgcaaagatg aactcttcat cctgctcgcg gttaaccaga cgttgcactt ctttgttgaa
    12481 gtcctgcacg cccatgctca ggcgattaaa gccttcggcg cgtaaatgat cgagtacatc
    12541 cagctcgatt tcccgcggat cgacttcgat cgaaatctcc gcatcggcat tgaactggaa
    12601 gttttcgcgc agcagcttca tcaggcggct gatttgcgct ttattcagat acgtcggcgt
    12661 tccgccgccc cagtgcaatt ggctgacgtg acgcccggcg aacagcggtg cacgatggac
    12721 gatttcttgc tccagcgcgt ccagatactg atcggccttg tgctgctggc gagtaacaat
    12781 cttattacaa ccgcagaagt aacaaagctt atggcagaac gggatatgta cgtagagaga
    12841 taatggacgc tcaggatagc gcgccacggc ttgtaaaaac gcctgttcgc caaagtcttc
    12901 tgaaaactcc agcgcggtcg ggtacgaggt gtatcgtggc ccggaatagt tatatttctg
    12961 gatcagggcc agatcccagt cgatttgctg tacagacatg ctcactcctt ccgatggcgt
    13021 ctctggcggc tacggcgtac cggcggatgc ccgtttcggg tcatcagccg gttgcgcagc
    13081 cacttttgtc gccgcgacaa ccgctgtagt ttaacgaata accacaccag ataacatata
    13141 accggaaggg ttatcagcag aacgggaagg cccacggcgg caatccgtta gttgccccgc
    13201 agcagacgca tcatgtcttc ttgcttctcg tcttcttcct cttcttcgtc atcgtcataa
    13261 gagaggccga gtttctgcat caactcatca atacgatcca gtttagcatc cacccaggat
    13321 tgctcttcgg cactcagggt ttcgcctgct tccagacgtt ccagcagcgc atccagacgc
    13381 tcatccgttt ccagtaattc caactccgcc tgcggtgaaa gcataggttt ctcactcttc
    13441 ggtttgtgct gtttggtgac tttttcagtc acgcccaatg gaataggggt tttactgcca
    13501 atacgtggat cttttggtgc gttctggcct ttgctgcctg acgtggtgtt tccgcccgct
    13561 gcgcggctgc ccggcgcatg accacgacgt tttttctgac gcttgcgatc acgagcttcc
    13621 tgatccagct cctcgcgtgt ttttcgacgc gcttttgcat gacctttgct gcgtgagttt
    13681 gaagatgatg gtttcataat ggttcgtctt ttagccgttt tattcagtat cgatttgcgg
    13741 cggaatctaa cagaaagcaa gcaaagaaaa aaggcgacag attactctgt cgcctttttt
    13801 cctgactcat aacccttaac gggtcttaca atccttgcag gccgccaaca caccctgttt
    13861 ttcctttagc cggaacaatc cgtgttgatt ccatttccgt ttaattacgt ctccggacgt
    13921 ttgtcttcct gacaatcctc tgtcttcgcc tcctggcgct cctgaccctc atcctgagtc
    13981 attgttcctg ttagcgtcct cgctctatgg gtgctacttt acgcctttgc tttaaacaaa
    14041 caatcaaccg ccatcagtat ttgcacattt tcagagtttt atataaaagc aattcactga
    14101 tttatatagc ttatttgaca tgcatcgcag aattttctct gctatttcgc ataaagacta
    14161 tcggcaatgt ctcacaaagc gtatggcttt tacttacaac gctcacgccg aaaaatccgc
    14221 cttttattat agttcaggta taatcgccac aaagctttga ctgacggaga cgaccgcttt
    14281 gactaatttg aattatcaac agacgcattt tgtgatgagt gcgcctgata ttcgccacct
    14341 accttccgat accggaattg aagtggcttt tgcaggccgt tccaacgcag gtaaatccag
    14401 cgcgctgaac acgctgacta accagaaaag cctggctcgt acctcaaaaa ccccagggcg
    14461 cacccagctt atcaacctgt ttgaagtggc tgacggcaag cgtctggttg acttgcctgg
    14521 gtacggttat gcggaagtcc cggaagagat gaagcgcaaa tggcagcgtg cgctcggcga
    14581 atacctcgaa aaacgtcaga gcctgcaagg tctggtggtg ctaatggata ttcgccatcc
    14641 gctgaaagat ttggatcagc agatgattga gtgggcggta gacagcaata tcgccgttct
    14701 ggtgctgctg accaaagcgg acaaactggc aagcggcgca cgtaaagcgc aattgaatat
    14761 ggtgcgtgaa gctgtactgg cgtttaacgg tgatgtgcag gttgaaacgt tttcttcgtt
    14821 gaagaaacaa ggcgtggaca agctgcggca gaaactggat acctggttta gcgagatgca
    14881 gcctgtagaa gaaacgcagg acggcgaata attttcttgc cttaatgctt gtgccggatg
    14941 tggcgtatcc ggcccgtaaa ttcaatagat tacaattcta ccgttggcct gataaacata
    15001 gcgcatcagg cattacggat cttttctttc gcccaataaa aaacgcccca gtcattactg
    15061 actggggcgg ctaaaatatt cagccaaatc cgattacgtg aagtaaaagg tctgaaagat
    15121 agaacatctt acctctgtac cctacgcgac taactttact cttttttgtt cagttcagaa
    15181 agcacttttt gtaatttttt ttcagttgtt gcataggaat ttctaatagc catcacaaaa
    15241 cgtgacagct tatgttgctt acttacgaaa aaagggcatg ttcaggcgaa tcttagtgcg
    15301 cctgatccca gttttcgcca ctccccactt ccaccagcaa cggcacatcc agacgggtac
    15361 agttttccat cagttgatga atctgcttcg cgacggcatc aacatcatct ttatgaactt
    15421 caaataccag ttcatcgtgt acctgcatga tcatacgtac acgcggttgc tcagcctgta
    15481 accacgcatc aacggcaatc atcgcccgtt tgataatgtc ggcggcggtt ccctgcattg
    15541 gcgcgttaat ggctgcacgt tcagccgctg cacgacgagc accattgctg gatttgatat
    15601 ccggcagata cagacggcgt ccgtccagcg tttcaacgta gccctgctct ttcgcctgag
    15661 cacgggtgcg ttccatatac tccagcacgc cagggtagcg ttcgaagtaa aggtccatgt
    15721 acttctgcgc ttctttacgt ggaatgttca attgccgcgc cagaccgaaa gcactcatgc
    15781 cataaatcag accaaagttg atcgctttcg cgctacggcg ttgctcgctg gtgacggttt
    15841 ccagtggcaa accaaacact tctgccgccg ttgcccggtg gatatctttt ccttccgcga
    15901 atgcggtcag caagcctttg tcacgcgaaa gatgcgccat aatgcgcagt tcaatctgcg
    15961 agtagtccgc tgagacaatc acataatcct ctggcgcaat aaacgcctgg cggatacgac
    16021 gaccttcttc gttacgcacc ggaatgtttt gcaggttagg atcggttgac gataaacgtc
    16081 ccgttgcagt tactgcctgg tgataagagg tatgcacacg cccggttttc gggttgatca
    16141 tcagcggcag cttgtcggtg taggtcgatt tcagcttcgc cagaccacga tactccagaa
    16201 tcacttttgg caacggatag tccagcgcca gttcttccag tacctcttcc gacgttgacg
    16261 gcgcgccacc cggcgttttc ttcagcggtt taataccctg tttttcaaac agaatggttt
    16321 gcaactgctt ggtggaagaa aggttaaatt cttcacctgc aatttcatgc gctttctttt
    16381 ccagctcagc cagacgcaag gtgagctctt cagaatgatt gtgcagcact ttcggatcga
    16441 tcttcacacc gttacgttca atgcgtgaaa gcaccggcac cagcggcatt tcgatattct
    16501 cgaagacgtt caacggccct ttgtgttttt gcaggtccgg ccacattttc agatgcaact
    16561 gcaaggtgac atcagcatct tcggcggcgt aacgtccggc ctcttcgagg gcaatctggt
    16621 taaaggtcag ttgatttttg cctttacccg caatctcttc aaaagtgatg gttttgtgct
    16681 tcaaccaacg ttccgcgagg ctgtccatat cgtgacgccc ggcaacgcta ttgagaatgt
    16741 aggactccag catggtatca aacgcaatcc cacgcagctc aatgccgtaa ttcgccagaa
    16801 taccgcgatc gtatttcagg ttttgcccga ccttcagcgc cttttcatct tccagcagcg
    16861 gttttagcaa ctcgagtgca cgctcgcgag agatttgatc gggcgcatca agataatcat
    16921 gagcaaccgg aatatatgcc gctacgcctg gctcgatagc aaaagaaagc ccgaccaggt
    16981 tagcagagat gttatcaagg ctgtcggttt cggtatcaaa tgcaaatacc ggcgcttttt
    17041 ccagcttcgc aatccacgct ttcagtgttt cttcatcaag gatggtgacg tagttgtcat
    17101 aagaaatcac cgttgccgtc acttctggcg cttcgtctgc aacactggtt tcctgcggct
    17161 tcgcggctgg ttttgcccct ttggcctgta accatttgcc cgcttcgaca tcagcagtcc
    17221 agcgtttgaa ctcatacttt ttgaacagcc ccaacaactc ttccgctgcc ggttgctgca
    17281 cttccagttg ttcacaggtc agctccagtt caacgtcggt tttaatcgtc gccagctggt
    17341 atgagagata agcaacttct ttgttttgct cgagcttcgc tgccattgtt ttcgcgccac
    17401 ggaagctcaa cccagcaatt ttttctggct cggcatacag cgtatccagc ccgcccagac
    17461 cttgcagcaa tgcctgcgcg gttttttcac cgacgcccgg tacgccaggg atgttatcgg
    17521 aggagtcacc catcagcgcc aggaaatcga tgatcagttc tggcggcacg ccgtacttat
    17581 tcaccacctc ttccggtccg aggatggtat tcgtcatggt attgataagc gtaatatttg
    17641 gcgtcaccag ctgcgccata tctttatcgc cagtgctgat cagcaccgga cgcccggctt
    17701 tttcggcttc gcgcgccaga gtaccgataa cgtcgtccgc ttctacgcca gaaaccgcca
    17761 gcagcggcag tcccatcgct ttaaccatcg cgtgcagagg ttcgatttgt gctctcagat
    17821 cgtccggcat tggcgggcga tgtgatttgt aatgttcaaa cagttcatca cgaaaggttt
    17881 ttcccttggc gtcaaagacc accgctgcat gcgtcggttt atattgcatg atcagactgc
    17941 gcagcatgtt gaggacacca tacatcgcac cggtcggctc gcctgcgctg ttagtcagcg
    18001 ggggaaacgc gtgatatgcg cgataaagat aagatgaacc atctacaagg ataagtggat
    18061 tttgggggat ctgaaccata atgtccgtgc ctgtttatca gattatgggt aaaggatgcc
    18121 acagacagga taaaaacatg agtttttcac cgcttttcgt gaaaatcttt tgtagatctt
    18181 ctggatcgct cgcaaatcgt catgtggata actttgtgca taaattattt acatcgcttt
    18241 taatttatta tcatgctttt tacagtatga tgtttgtctt tgtttttcat gtagttaaaa
    18301 ataaagccat ccctaataat tgagataatg ggattttttc taatgtggat agatatgaat
    18361 tatttttctc cttaaggatc atccgttatt tgggtcgttt tctgctaaaa tctgcgcctt
    18421 gcgcttcttt agcgcactgt ctatggctaa ccttttgaat aaattcatta tgacgagaat
    18481 actcgctgcg ataacccttt tgctgagtat cgtattgacc attttggtca ctattttttg
    18541 ttccgtcccg atcatcattg ccgggattgt aaaactattg ctacctgtgc cagtcatttg
    18601 gcgaaaggtt tcgcgttttt gtgattttat gatgtattgc tggtgtgaag gtctggcggt
    18661 attactgcat ctgaacccac tcctgcaatg ggaagttcac gggctggaag ggttaagtaa
    18721 gaagaactgg tatctgctta tttgtaacca ccgtagttgg gcagatattg tcgtactgtg
    18781 cgtgctgttt cgtaagcaca ttccgatgaa taaatatttc ctcaagcaac agctggcctg
    18841 ggtgccattt cttggcctgg cgtgctgggc gctggatatg ccgtttatga agcgttattc
    18901 ccgcgcttat ttattacgtc atccggagcg acgtggtaaa gatgttgaaa ccactcggcg
    18961 ttcttgtgaa aagtttcgcc tgcatcccac caccattgtc aatttcgttg aaggctcccg
    19021 tttcacgcaa gaaaaacatc agcaaaccca ctccactttt caaaacttgt tgccaccaaa
    19081 ggcggcaggc attgcgatgg cgctaaatgt actgggtaaa caattcgata aactgcttaa
    19141 tgttacgctg tgttatccgg acaataaccg tcagccgttc ttcgatatgt taagcggtaa
    19201 actgacgcga attgtcgttc atgtggattt acagcctatt gccgatgagt tacatggcga
    19261 ctacatcaat gacaaaagct ttaagcgcca ttttcagcaa tggctgaact cactgtggca
    19321 ggaaaaagac cgacttctga cgtcgttgat gtcatcacag cggcaggaca agtaaatttt
    19381 gctcgcctct gaatgagcag aggcgagtga gtattttaat gaacaaaacg tccggcacga
    19441 gacataaatt cttcttcgct catctcctgt ccgttaaaaa caactttacc cggtgtataa
    19501 cgcagttgca gcggggcggt attgttgtca atcgtgatta actgaaacat ctgacctaag
    19561 gtcatcatcc cgctgatttg tttatcagcc cgcttttgcg ctttttccgc atccattcct
    19621 tcagataaat taagctgttt tgcggtttct gtgacgacat taagcggtaa cttcacatca
    19681 aaattgagcg atttgatatc tttgtttgtg gatgatgaag atttggctgg gtcggcaata
    19741 ctgatatcca gattggcatt tagttcgccg agtgcgttct tccatcttac cggttgttta
    19801 atggtcggct cactttgttg taataacggt aaatactctt tgaacaatgc agcattcact
    19861 tcttgcagag caacttcatc gtttgctaac tcagggtgtc cagcaagctg cttctgcatc
    19921 gcaatgttat actggatgat aaattggcgc actgctgagg gatcaataga ttcagcaatc
    19981 aatgaccact caccactacc gagttgctga ttcccttttg ttaacttatc aagttcgtag
    20041 gtcagattga cattgatata atctttgtct ttaacgcgat ccagcctggt ttttgcaacg
    20101 aaagcatcga tttgggcaac gtcttccccc tgattgataa tattaacctg attaaatttc
    20161 gactcgcttt caccaaccgg aaatttcttt tcttctaatc gtgtcagaga atcaatggta
    20221 aaactttttg ccgttacttt gttcattggt gataattgca gaacaatatc ttcgactttg
    20281 ccttcaatat ccaggttaga caatgaacta ccatcaccat taaaagtaaa ctggccctca
    20341 ccaaaagaaa actttccata ctctgcaggg gcaacatcta atgtcgtaga gaatgagcca
    20401 ccaaacgcga atcgcaatgt cgcttccacg ggcgatttat ttttcgcggc gataaatagc
    20461 ggttgtgtca gttcattatt cactaagttc acttttgccg ctgccagtgc tgggatgaca
    20521 ttaccatgca ttaacattgt gatgggcaac ggaccgtgct caacatccac atcaaatgca
    20581 accttctggc ctggcttgat attgagatcg ggtgcaccgt tatcaaatga aatttgcatt
    20641 tgaaaatggg aattaaaaaa gcctttgtca aagtttttat aacttaacgt catatcgtag
    20701 gcatgttcac ctttcttttt agcatcgtta aaatctttaa taaatttttc gacaccaggc
    20761 tgaatttgcg tacctgtgta ccatgtgcca ccaccccaga ttacggctaa cgcaacaata
    20821 acacctgtag ctgacttacg tatcatataa atattccctg ataaaacagc aaaactttga
    20881 atatccactt atgctgaaat aatgtccagc ggcaggatgt attatcagaa tgtatttata
    20941 tttattaaat aataaaaaaa gcccgtgaat attcacgggc tttatgtaat ttacattgaa
    21001 ttattttttc tcggacagat atttcactgt atcagcatac tgctgaacaa aaacatccat
    21061 attgctggta tccataccct gcggattcag ctgatattta ccgttaacaa acatcgccgg
    21121 aacaccgcgc aattgcacgt cagctgcagc tttttcctgc tgagctacca gagatttcac
    21181 cacgaagctg ttccacgccg cgtcgtactc ttcaccttta atacctgcgt tgataaatac
    21241 atcgcggata tcagaagcag aacgaatggt ctgggttttc tgtacgcctt caaacagcgg
    21301 aacagtcact ttgtcttcca cgcccagcgc catcgccaca gcccatgcct gagtcagatc
    21361 tttgcccagg tcaccaccca tgaagttgac gtggtattta gtcatcttca cgccttccgg
    21421 cagttttttc ttcacattat cagaaatatg cagaacttct tcaaactgat agcagtgcgg
    21481 acagaagaaa gagaaaaact ccagcacttg cggcgcgcca gctaccggtt tttccagggt
    21541 agtgtactgt ttaccatctt catactgcgc cgccgatgcg ctaaacgcta aaactaaacc
    21601 agccagcgcc agccaaatct ttttcatgat ctactctctc cgattaatac ataggtgtta
    21661 attgtaaagg gggttcttgt agaacttttg cctgttctat aaaagtcgcc gtttgtcgca
    21721 gccagtaatc ttccccggtt aaccacggga aatttttcgg gaacgcggga tcagcccaac
    21781 gccgcattag ccaggcaaga taataaacca aacgcatggc gcgtaaaggt tcaatcagtc
    21841 cgatttcagc ggtgtcgaac tcgctaaatt cttcataagc ttcaataata gtttccagtt
    21901 gcatccgctg ctcggcttta tcgccattga gcaacatcca caaatcctga atagctggac
    21961 cattacgtgc atcatccaga tcaacaaaca ttggaccatc gcgccagaga atattcccgg
    22021 cgtggcagtc tccatgtaag cgcagaacgg tggaatcttc ccgccagtgc gctgtaacgg
    22081 cggcgatcag ctcatctgtc gctttcagga atgccgcttt caacccggaa ggtatcagtg
    22141 tagcgtcctc aaacagcttg cgtggctcaa tgagatattc attcagaccg atggtcgggc
    22201 gatggataaa aagctgtttg cgccccgtct ggtgcatacg ccctaaataa cgcccaaccg
    22261 cttccatctg atcgatatta tcagcttcga actggcgacc accgacgctt ggaaaaacag
    22321 cgaaataaaa tccctgatga ttcaataaag tctgaccgtt aaaggccaca ggtgctgcga
    22381 ccggaacttc atcatttacc aactgcaacg caaattgatg ttctccgagg atttgatcgg
    22441 ctgtccaacg ttcagggcga taaaatttga cgacaatacg tcgacgatct tcgtcctgaa
    22501 attgatagac acggttttca tagctgttaa gcggggtaag accggaatcc acccggatcc
    22561 cttgctcaaa tagagcatcc atgatggtat ccgggtgtag tgtctggaaa gtaaaagcgc
    22621 tgttgttcat cccatcatcc ggaaaacatt acgaatgatg aaggatatca tttcacgatg
    22681 attttggtgg cgccgcttac aagcttttac tctttaatta cgccgcgagc gcgtaacagc
    22741 gccgttttga agtcttcttc ataatctttc tgcaaacccg ggatcaccgc atctttcgcg
    22801 gaatcacgca ttttcaggtg atagatcaga atgtcatccg tcaaatccgc cagttcgccg
    22861 tcaaaacctg actctttcgc cagtttctgc aaaaattgca acaggttaag gtctggctct
    22921 ttttgccagg ctggctggag gaattcaata acttcattca gacgtttaca tttcatagtg
    22981 atgctcctta ctcttgagac agacacgtta gcagggtcaa tcccacaata aaagaggcga
    23041 tatcggtgaa tctgatgacg acgataacag gcgttgtgct ggcaggcggt aaagccagac
    23101 gaatgggcgg cgtagataaa ggattgcttg aattaaacgg caaaccatta tggcaacatg
    23161 tcgctgacgc gcttatgacg cagctctctc acgtcgtggt taatgccaat cgtcatcagg
    23221 aaatctatca ggcaagcggt ctgaaagtga ttgaagattc actggcggat tacccaggcc
    23281 ctctggcagg aatgctttca gtaatgcagc aggaagctgg tgagtggttt ttgttttgcc
    23341 cgtgcgatac gccttacatt ccccctgatt tagcagcccg gcttaatcat cagcgcaaag
    23401 atgcgcctgt cgtgtgggtc catgacggtg aacgcgatca cccgactatt gctctggtaa
    23461 accgcgctat tgagccttta ttactggaat atctgcaagc aggagaacgc cgggtaatgg
    23521 catttatgcg tctggctggc ggtcatgcgg ttgatttcag cgatcataaa gatgcatttg
    23581 ttaacgtgaa tacgccagag gagcttgccc gatggcagga aaaacgatga taccgttact
    23641 cgcctttgcc gcgtggagtg gtaccggaaa aactacgctt ttgaaaaaac tgatcccggc
    23701 attatgcgcc agagggatcc gtccagggct gattaagcat acgcaccatg atatggatgt
    23761 tgataagcca ggcaaagata gctatgagct gcgcaaggct ggcgcggcac aaaccatcgt
    23821 tgccagccag caacgatggg ccttgatgac ggaaacacca gacgaagaag agctggatct
    23881 acagtttctc gcaagtcgaa tggatacctc aaagctggat ttgattctgg tcgaagggtt
    23941 taagcatgaa gagatcgcaa agattgtgct gtttcgcgat ggagccggac atcgacctga
    24001 agaattagtg atagacaggc atgttattgc tgtagccagt gatgtgccgc ttaatcttga
    24061 tgtcgcatta ctggatatta atgatgttga ggggctggct gattttgtag tggagtggat
    24121 gcaaaagcag aacggataag caagagtagg ctggatcaga cgcagccagt gtcgcatccg
    24181 acctttttct gcaccagcgc aaaaaggccc agtcttccga
//
LOCUS       DADMHC010000045        23502 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.045, whole genome shotgun sequence.
ACCESSION   DADMHC010000045 DADMHC010000000
VERSION     DADMHC010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 23502)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23502)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23502
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.045"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(298..612)
                     /gene="pspE"
                     /locus_tag="JNZ57_001499"
     CDS             complement(298..612)
                     /gene="pspE"
                     /locus_tag="JNZ57_001499"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase PspE"
                     /protein_id="HAY8827769.1"
                     /translation="MFKKGLLALALVFSLPVFAAEHWIDVRVPEQYQQEHVQGAINIP
                     LKEVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHVENAGGLKDIAMPKV
                     KG"
     gene            complement(687..908)
                     /gene="pspD"
                     /locus_tag="JNZ57_001500"
     CDS             complement(687..908)
                     /gene="pspD"
                     /locus_tag="JNZ57_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707216.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein PspD"
                     /protein_id="HAY8827770.1"
                     /translation="MNTRWQQAGQKVKLGFKLAGKLVLLTALRYGPAGVAGWAIKSVA
                     RRPLKMLLAVALEPLLSRAANKLAQRYKR"
     gene            complement(917..1276)
                     /gene="pspC"
                     /locus_tag="JNZ57_001501"
     CDS             complement(917..1276)
                     /gene="pspC"
                     /locus_tag="JNZ57_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspC"
                     /protein_id="HAY8827771.1"
                     /translation="MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLS
                     IFFGLALFTLVAYIILSFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLREME
                     RYVTSDTFTLRSRFRQL"
     gene            complement(1276..1500)
                     /gene="pspB"
                     /locus_tag="JNZ57_001502"
     CDS             complement(1276..1500)
                     /gene="pspB"
                     /locus_tag="JNZ57_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspB"
                     /protein_id="HAY8827772.1"
                     /translation="MSALFLAIPLTIFVLFVLPIWLWLHYSNRSGRSELSQSEQQRLA
                     QLVDEAKRMRERIQALESILDAEHPNWRDR"
     gene            complement(1554..2222)
                     /gene="pspA"
                     /locus_tag="JNZ57_001503"
     CDS             complement(1554..2222)
                     /gene="pspA"
                     /locus_tag="JNZ57_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein PspA"
                     /protein_id="HAY8827773.1"
                     /translation="MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVR
                     STSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIK
                     SLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGK
                     LDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAELKADDAISEQLAQLKAKMK
                     QDNQ"
     gene            2389..3366
                     /gene="pspF"
                     /locus_tag="JNZ57_001504"
     CDS             2389..3366
                     /gene="pspF"
                     /locus_tag="JNZ57_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309907.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein operon transcriptional
                     activator"
                     /protein_id="HAY8827774.1"
                     /translation="MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKEL
                     IASRLHYLSSRWQGPFISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGG
                     TLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPATVNEGT
                     FRADLLDRLAFDVVQLPPLRERESDIMLMAEHFAIQMCREIKLPLFPGFTERARETLL
                     NYRWPGNIRELKNVVGRSVYRHGTSDYPLDDIIIDPFKRRPPEDAIAVSETTSLPTLP
                     LDLREFQMQQEKELLQLSLQQGKYNQKRAAELLGLTYHQFRALLKKHQI"
     gene            complement(3486..4751)
                     /gene="puuE"
                     /locus_tag="JNZ57_001505"
     CDS             complement(3486..4751)
                     /gene="puuE"
                     /locus_tag="JNZ57_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-aminobutyrate transaminase"
                     /protein_id="HAY8827775.1"
                     /translation="MSNNEFHQRRLSATPRGVGVMCNFFAQSAENATLKDVEGNEYID
                     FAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQA
                     KTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGP
                     FPGSVYHVPYPSDLHGISTQDSLDAIECLFKSDIEAKQVAAIIFEPVQGEGGFNVAPK
                     ELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGMPLS
                     GVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTL
                     IDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYG
                     NVIRFLYPLTIPDAQFDAAMKILQDALSD"
     gene            complement(4789..6066)
                     /locus_tag="JNZ57_001506"
     CDS             complement(4789..6066)
                     /locus_tag="JNZ57_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HAY8827776.1"
                     /translation="MTEHTSSYYAASANKYVPFDTLNESITCDVCVVGGGYTGLSSAL
                     HLAEAGFDVVVLEASRIGFGASGRNGGQLVNSYSRDIDVIEKSYGMDTAPMLGSMMFE
                     GGEIIRERIKRYQIDCDYRPGGLFVAMNDKQLATLEEQKENWERYGNKQLELLDANAI
                     RREVASDRYTGALLDHSGGHIHPLNLAIGEADAIRLNGGRVYELSAVTQIQHTTPAVV
                     RTAKGQVTAKYVIVAGNAYLGDKVEPELAKRSMPCGTQVITTERLSEDLACSLIPKNY
                     CVEDCNYLLDYYRLTADNRLLYGGVVYGARDPDDVERLVVPKLLKTFPQLKGVKIDYR
                     WTGNFLLTLSRMPQFGRLDTNIYYMQGYSGHGVTCTHLAGRLIAELLRGDAERFDAFA
                     NLPHYPFPGGRTLRVPFTAMGAAYYSLRDRLGV"
     gene            complement(6068..7555)
                     /gene="puuC"
                     /locus_tag="JNZ57_001507"
     CDS             complement(6068..7555)
                     /gene="puuC"
                     /locus_tag="JNZ57_001507"
                     /EC_number="1.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase PuuC"
                     /protein_id="HAY8827777.1"
                     /translation="MNFHHLAYWQDKALSLAIENRLFINGEYTAAAENETFETVDPVT
                     QAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELA
                     LLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGV
                     IAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLN
                     VVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIV
                     FADCSDLQKAASSTAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHP
                     LDPATTMGTLIDCAHADSVHSFIREGEGKGQLLLDGRNAGLAAAIGPTIFVDVDPNAS
                     LSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWMRDLSRAHRMSRRLKAGSVF
                     VNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISLEA"
     gene            complement(7830..8387)
                     /gene="puuR"
                     /locus_tag="JNZ57_001508"
     CDS             complement(7830..8387)
                     /gene="puuR"
                     /locus_tag="JNZ57_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001464354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator PuuR"
                     /protein_id="HAY8827778.1"
                     /translation="MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDK
                     VSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGN
                     PNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINT
                     GIPHSFSNTSAGICRIISAHTPTTF"
     gene            complement(8414..9177)
                     /gene="puuD"
                     /locus_tag="JNZ57_001509"
                     /pseudo
     CDS             complement(8414..9177)
                     /gene="puuD"
                     /locus_tag="JNZ57_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415814.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase"
     gene            9390..10808
                     /locus_tag="JNZ57_001510"
     CDS             9390..10808
                     /locus_tag="JNZ57_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase"
                     /protein_id="HAY8827779.1"
                     /translation="METNIVEVENFVQQPEERRGSAFTQEVKRYLERYPNTQYVDVLL
                     TDLNGCFRGKRIPVSSLKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVP
                     VLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVEL
                     EFYLLDRQRDAEGYLQPPCAPGTDDRNTHSQVYSVDNLNHFADVLNDIDELAQLQLIP
                     ADGAVAEASPGQFEINLYHTDNVLEACDDALALKLLVRLMAEKHKMHATFMAKPYEEH
                     AGSGMHIHISMQNNRGENVLSDTEGEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRR
                     FQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAGADANPYLVMAAIFAGILH
                     GLDNELPLQEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKN
                     DELLQFERLITETEIEWMLKNA"
     gene            10957..11121
                     /locus_tag="JNZ57_001511"
     CDS             10957..11121
                     /locus_tag="JNZ57_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827780.1"
                     /translation="MPMIKSPHGEGGCVCAPPATDWTPSPLLPLLNRFDFRSTRPQTL
                     LRRGGSNYGY"
     gene            11111..12496
                     /gene="puuP"
                     /locus_tag="JNZ57_001512"
     CDS             11111..12496
                     /gene="puuP"
                     /locus_tag="JNZ57_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine/proton symporter PuuP"
                     /protein_id="HAY8827781.1"
                     /translation="MAINSPLNIAAQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTF
                     GIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEADSAYTYAQKSINPHVGFMV
                     GWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVCVVTFVAILTAANLKSINLVANFN
                     TLFVLVQISIMVVFIFLVVQGLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSF
                     LGFDAVTTLSEETPDAARVIPKAIFLTAVYGGVIFIAASFFMQLFFPDISRFKDPDAA
                     LPEIALYVGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMGRDNVFPERVFGYVH
                     PKWRTPALNVIMVGIVALSALFFDLVTATALINFGALVAFTFVNLSVFNHFWRRKGMN
                     KSWKDHFHYLLMPLVGALTVGVLWVNLESTSLTLGLVWASLGGAYLWYLIRRYRKVPL
                     YDGDRTPVSET"
     gene            12630..12875
                     /locus_tag="JNZ57_001513"
     CDS             12630..12875
                     /locus_tag="JNZ57_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmjA family protein"
                     /protein_id="HAY8827782.1"
                     /translation="MNHDIPLKYFDIADEYATECAEPVADAERTPLAHYFQLLLTRLM
                     NNEEISEEAQHEMAAEAGINPVRIDEIAEFLNQWGNE"
     gene            13188..14831
                     /gene="sapA"
                     /locus_tag="JNZ57_001514"
     CDS             13188..14831
                     /gene="sapA"
                     /locus_tag="JNZ57_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein SapA"
                     /protein_id="HAY8827783.1"
                     /translation="MRQVLSSLLVIAGLVSGQAIAAPESPPHADIRDSGFVYCVSGQV
                     NTFNPSKASSGLIVDTLAAQFYDRLLDVDPYTYRLMPELAESWEVLDNGATYRFHLRR
                     DVPFQKTDWFTPTRKMNADDVVFTFQRIFDRNNPWHNVNGSNFPYFDSLQFADNVKSV
                     RKLDNHTVEFRLAQPDASFLWHLATHYASVMSAEYARKLEKEDRQEQLDRQPVGTGPY
                     QLSEYRAGQFIRLQRHDDFWRGKPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPAAS
                     QLSILRDDPRLRLTLRPGMNVAYLAFNTAKPPLNNPAVRHALALAINNQRLMQSIYYG
                     TAETAASILPRASWAYDNEAKITEYNPAKSREQLKALGLENLTLKLWVPTRSQAWNPS
                     PLKTAELIQADMAQVGVKVVIVPVEGRFQEARLMDMSHDLTLSGWATDSNDPDSFFRP
                     LLSCAAIHSQTNLAHWCDPKFDSVLRKALSSQQLAARIEAYDEAQSILAQELPILPLA
                     SSLRLQAYRYDIKGLVLSPFGNASFAGVYREKQDEVKKP"
     gene            14828..15793
                     /gene="sapB"
                     /locus_tag="JNZ57_001515"
     CDS             14828..15793
                     /gene="sapB"
                     /locus_tag="JNZ57_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease SapB"
                     /protein_id="HAY8827784.1"
                     /translation="MIIFTLRRILLLIVTLFLLTFVGFSLSYFTPHAPLQGASLWNAW
                     VFWFNGLIHWDFGVSSINGQPIAEQLKEVFPATMELCILAFGFALIVGIPVGMIAGIT
                     RHKWQDNLINAIALLGFSIPVFWLALLLTLFCSLTLGWLPVSGRFDLLYEVKPITGFA
                     LIDAWLSDSPWRDEMIMSAIRHMILPVITLSVAPTTEVIRLMRISTIEVYDQNYVKAA
                     ATRGLSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAI
                     RQQDYAAISAGVMVCGSLVIIVNVISDILGAMANPLKHKEWYALR"
     gene            15780..16670
                     /gene="sapC"
                     /locus_tag="JNZ57_001516"
     CDS             15780..16670
                     /gene="sapC"
                     /locus_tag="JNZ57_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease SapC"
                     /protein_id="HAY8827785.1"
                     /translation="MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCI
                     FGGWFAPYGIDQQFLGYQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGA
                     FVVTLAATICGLVLGTFAGATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSH
                     AMFAVWLALLPRMVRSIYSMVHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLVT
                     EITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMIS
                     VLLVNLLGDGVRRAIIAGVE"
     gene            16670..17662
                     /gene="sapD"
                     /locus_tag="JNZ57_001517"
     CDS             16670..17662
                     /gene="sapD"
                     /locus_tag="JNZ57_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter ATP-binding protein
                     SapD"
                     /protein_id="HAY8827786.1"
                     /translation="MPLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGS
                     GKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCL
                     DPSERVGRQLMQNIPAWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELT
                     EGECQKVMIAIALANQPRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHD
                     LQMLSQWADKINVLYCGQTVETAPSKELVTMPHHPYTQALIRAIPDFGSAMPHKSRLN
                     TLPGAIPLLEQLPIGCRLGPRCPYAQRECIVTPRLTGAKNHLYACHFPLNMEKE"
     gene            17664..18470
                     /gene="sapF"
                     /locus_tag="JNZ57_001518"
     CDS             17664..18470
                     /gene="sapF"
                     /locus_tag="JNZ57_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter ATP-binding protein
                     SapF"
                     /protein_id="HAY8827787.1"
                     /translation="MIETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLA
                     IIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYSFRSQRIRMIFQDPSTSLN
                     PRQRISQILDFPLRLNTDLEPEQRRKQIIETMRMVGLLPDHVSYYPHMLAPGQKQRLG
                     LARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHIS
                     DQVLVMHQGEVVERGSTADVLASPLHELTKRLIAGHFGEALTADAWRKDR"
     gene            18538..18891
                     /locus_tag="JNZ57_001519"
     CDS             18538..18891
                     /locus_tag="JNZ57_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HAY8827788.1"
                     /translation="MMDKIKSNARDLRRNLTLQERKLWRYLRSRRFGDFKFRRQHPVG
                     SYILDFACCSARVVVELDGGQHDLAVAYDTRRTSWLESQGWTVLRFWNNEIDCNEEAV
                     LEIILQELNRRSPSP"
     gene            19259..20047
                     /gene="fabI"
                     /locus_tag="JNZ57_001520"
     CDS             19259..20047
                     /gene="fabI"
                     /locus_tag="JNZ57_001520"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HAY8827789.1"
                     /translation="MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL
                     KGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDG
                     DYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG
                     LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRR
                     TVTIEDVGNSAAFLCSALSAGISGEVVHVDGGFSIAAMNELELK"
     gene            20192..21319
                     /locus_tag="JNZ57_001521"
     CDS             20192..21319
                     /locus_tag="JNZ57_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309887.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMD domain-containing protein"
                     /protein_id="HAY8827790.1"
                     /translation="MEQRHITGKSHWYHETQSSTAEYDVLPLVPEAAKVSDPFLLDVI
                     LDEETLAPFLSWLVPARVLAVELFPDQLTVTRSQTFTAYERLSTALTVAQVCGVQRLC
                     NYYSARLTPLPGPDSSRESNHRLAQITQYARQLASSPSIIDNRSRQHLNDVDLTAWDC
                     VIINQIIGFIGFQARTIATFQAYLGHPVRWLPGLEIQNYADASLFADESIRWRSSYEV
                     EKLPEEYTKSSTAELCQLAETLSLHPISLSLLERLLNSTRVNTQPDNKLAALLCARIN
                     GSPACFAACMDSSNEYKKISPLLRKGENEINQWADRHSVEHATVQAIQWLTRAPDRFS
                     TAQFSPLLEHEQSSTQIINLLVWSGLCGWINRLKIALGETY"
     gene            21387..23321
                     /gene="rnb"
                     /locus_tag="JNZ57_001522"
     CDS             21387..23321
                     /gene="rnb"
                     /locus_tag="JNZ57_001522"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exoribonuclease II"
                     /protein_id="HAY8827791.1"
                     /translation="MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSY
                     FIPPPQMKKVMHGDRIIAVIHSEKERESAEPEELVEPFLTRFVGKVQGKNDRLAIVPD
                     HPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGDDHFVP
                     WWVTLARHNLEKEAPDGVATEMLDEGLVREDLTALDFVTIDSASTEDMDDALFAKALP
                     DDKLQLIVAIADPTAWIAEGSKLDKAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRAN
                     EVRPVLACRMTLSADGAIEDNIEFFAATIESKAKLVYDQVSDWLENTGDWQPESEAIA
                     EQVRLLAQICQRRGEWRHNHALVFKDRPDYRFILGEKGEVLDIVAEPRRIANRIVEEA
                     MIAANICAARVLRDKLGFGIYNVHMGFDPANADALAALLKTHGLHVDAEEVLTLDGFC
                     KLRRELDAQPTGFLDSRIRRFQSFAEISTEPGPHFGLGLEAYATWTSPIRKYGDMINH
                     RLLKAVIKGETATRPQDEITVQMAERRRLNRMAERDVGDWLYARFLKDKAGTDTRFAA
                     EIVDISRGGMRVRLVDNGAIAFIPAPFLHAMRDELVCSQENGTVQIKGETVYKVTDVI
                     DVTIAEVRMETRSIIARPVA"
     gene            complement(23399..>23502)
                     /locus_tag="JNZ57_001523"
     CDS             complement(23399..>23502)
                     /locus_tag="JNZ57_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827792.1"
                     /translation="TYMKLTAAKRIVFFIYLFVIQFWKNASFQTKVS"
BASE COUNT         5314 a         6215 c         6115 g         5858 t
ORIGIN      
        1 agacgcgtta caagtttctg taaatgagtt gcggtaaatg ttccaccgta gatttcgtcc
       61 aggtaataag taattttctg tttcatgttg cctttcagtg gtagcgatcc catgaaacga
      121 gagactactc cgcagaaaat aaactgtcaa ttgagcacaa gagttttagt cacgcaggaa
      181 atcatttttt accagggaaa aagcgtattt gtgagctgac gcaaataatc tatggggatg
      241 taaataaggt gtgacagaaa aaaaacggcg cataagcgcc gctcatggtg aattctttta
      301 acctttgacc ttcggcattg cgatgtcttt caagccaccg gcgttctcaa cgtgggtata
      361 tcccatctcg ctaaggatct cttttgcttg ccctgactgg cgtccggcat tgcaatacac
      421 tttcacggtg tcgtttttat ccggaacggc ggtggcaatg cgctctttca cttccttcag
      481 gggaatattg atggccccct gaacgtgctc ttgctgatac tgctctggaa cacgaacatc
      541 gatccagtgt tcagcggcga aaacgggcag tgaaaacacc agtgccagag caagtaagcc
      601 ttttttaaac atgtaagcgt ccttctatgg atgaaaattg ccatccatta tacgcctgag
      661 atttaacaat ttttgcgaaa ctcccctcac cttttataac gctgtgccag tttattagca
      721 gcccgactta acagcggttc cagcgccaca gccagcaaca ttttcagcgg tcggcgagca
      781 actgatttta tcgcccagcc cgctacaccc gccgggccat agcgcagtgc ggtaagaagt
      841 accagcttgc ctgctaattt gaaaccaagc tttacctttt gcccggcctg ttgccagcga
      901 gtattcataa ctttcctcac agttgacgga aacggctacg taacgtgaaa gtatcggaag
      961 tgacataacg ttccatctcg cgtaaacgcg tttcacttgc cgccagttca cggtcgactt
     1021 catccagcaa ttcgctgctg gagggtagct gctcaccaaa ggccatgttg tccggcattg
     1081 gatcaagcgc aaatgacaaa atgatgtaag caaccagggt aaacagcgcc agaccgaaga
     1141 aaatcgacag caccaccagg atacgcacca gttttaccgg tacatcaaaa tagttggcaa
     1201 tcccggcgca gacgccgcgg accatgccct gctgtggaat acgccataat tttttattga
     1261 gattaatgcc cgccattagc gatccctcca gttcggatgt tctgcatcaa gaatagattc
     1321 cagcgcctga atacgttcgc gcatccgttt tgcttcatca accagttgcg ctaatcgctg
     1381 ctgctcactt tgcgacaatt cactgcgacc agaacgattg ctgtaatgca gccataacca
     1441 gatcggtaaa acaaacagca caaaaatggt taacggaata gccagaaata gcgcgctcat
     1501 aagtactcct tagacgatga gcggcggcgc gttcggaggc cgcctggatg ttattattga
     1561 ttgtcttgct tcattttggc ttttaattgt gccagttgtt cgctgattgc atcatcggct
     1621 ttcagttcgg caaactgatc gtccagcgat ttttgtttac cgaagctgtg gctttctgct
     1681 tccgcttcca tctggtcaat acgacgttcg aaagattcga aacgagccat tgcttcatcc
     1741 agtttgccac tgtccagctg acgacgcaca tcgcgcgacg agtttgccgc ctgatggcgt
     1801 aacatcaatg cctgctggcg agcgcgtgtt tcgctcaatt tgttttccag ctcaccgatc
     1861 tctttcttca tgcgtgccag cgtatcgtcc accagcgtca cttcatgttc cagactctta
     1921 atcagatcgg tcagtttctg tttttcaatt aacgccgcac gtgccaaatc ctctctctct
     1981 ttcagcagcg ccagttcggc tttttcctgc cattcaactt cacgcgccga cgcttgttca
     2041 atacggcgag tcagctgttt cttttctgcc aacgcacgcg ccgaagtaga acgtacttca
     2101 accagagtat cttccatctc ctggatcatc agacgcacca gtttctgtgg atcttccgct
     2161 ttctctaaca gagcgttgat gttggcattc acgatgtcgg caaagcgaga aaaaataccc
     2221 ataatgttgt cctcttgatt tctgcgttca ggattgtcct gctgaactgt taatacaatt
     2281 tgcgtgccaa ttttttatct ttttgattta taaagatctg attgaagaat catcagcaac
     2341 atgccaggat gaattagcga attacactaa caagtggcga atttcatcat ggcagaatac
     2401 aaagataatt tacttggtga ggcgaacagc tttctcgaag tgctggaaca ggtttcgcat
     2461 ctcgcaccgc tggacaaacc ggtgctcatc atcggcgaac gcggcaccgg taaagagctg
     2521 attgccagcc gcctgcatta tctctcctcc cgttggcaag ggccgtttat ttcccttaac
     2581 tgcgcggcgt taaatgaaaa tctgctggat tccgaactgt ttggtcacga agcgggggcg
     2641 tttaccggtg cgcaaaaacg tcatccaggg agatttgaac gtgccgacgg cggtacgcta
     2701 tttcttgatg aactcgctac ggcaccgatg atggtgcagg agaaattatt gcgcgtgatt
     2761 gagtacggtg aactggagcg cgttggcggc agccagccat tgcaggtgaa tgtgcggttg
     2821 gtatgcgcga cgaatgccga tctcccggcg acggtcaatg aaggcacttt tcgcgctgac
     2881 ctgctcgacc gactggcttt tgatgttgta caactgccac cactgcgcga gcgcgaaagc
     2941 gacataatgt tgatggcaga acactttgcc atccagatgt gtcgggaaat caagctgcct
     3001 ctgttcccgg ggtttacgga gcgcgccaga gaaacattgc tgaattatcg ttggccggga
     3061 aatattcgtg aattgaaaaa cgtggtggga cgttcagtgt atcgccacgg caccagcgat
     3121 tatccgcttg atgacatcat tattgatccc tttaaacggc gtccgcctga agacgctatc
     3181 gccgtttcag aaaccacctc gcttccaaca ctgccgctgg atttacgtga gtttcagatg
     3241 cagcaggaaa aagagttgct gcaactcagt ttgcaacaag ggaaatataa ccagaagcgc
     3301 gcggctgaat tactggggtt aacttatcat cagttccgcg cgttgttgaa aaagcaccag
     3361 atttagcgaa gttgagcaat acaacttgcc ggatgcggcg tgaatgcttt attcggcata
     3421 cataatcaat aagtcgtttg caggcctgat aagcgcagcg catcagacat tattgcgttg
     3481 ggctattaat cgctcagcgc atcctgcaaa attttcattg ccgcatcgaa ttgcgcatcc
     3541 gggatggtca gcggatacag gaagcgaatc acgttgccgt atgcgccaca ggtcagcagg
     3601 agcagcccct gcgccagcgc gcgttgctgg attttctgtg caatcgccgc tgacggctcg
     3661 cccgtttgcg gatcgttaaa ctctgccgca atcatcgacc ccaggccgcg taccgcagca
     3721 atggccggaa cgctttcttt ggcatcaatc aacgtgtttt tgagacgctg gcccagttga
     3781 ttcgcgcgtt cgcagagtga ttctttgtcg ataatattga gcaccgcgtg cgcggcagcc
     3841 accgccagcg ggttcccggc gtaggtgcca cccaacccgc ccggcgcggg cgcgtccata
     3901 atattcgcgt taccgaccac gcccgaaagc ggcatcccgc ccgcgaggct tttcgccatc
     3961 gtcattaagt ccggcttatc ggcgtaatga tccatggcaa acagtttacc ggtacgcgca
     4021 aagccgcttt gcacttcatc ggcaatcatc acaataccgt gctcgtcgca caggcggcga
     4081 atggcggcaa ccagctcttt tggcgcaacg ttgaaaccgc cctcgccctg caccggttcg
     4141 aaaataatgg ccgccacctg cttcgcttca atgtccgatt taaacaagca ttcgatggcg
     4201 tcgagggagt cctgtgttga aatgccgtgt aaatctgacg gataaggtac gtgatacacc
     4261 gaaccaggga acgggccgaa gccgattttg tacggcgcaa cttttccggt cagcgccatg
     4321 gtcatatatg tacgaccgtg gaagccgccg ctaaacgcaa tcacgccagg tcgtccggta
     4381 tgggcgcgag caattttcac cgcgttttcc accgcttccg cgccggtagt gaagaatgcg
     4441 gttttagcct gcccgctcac tggggcaagg gcgttaattt tctccgccag cgtgacgtag
     4501 ctttcgtacg gcacaatctg atacgccgtg tgggtaaact gttgcaattg ctgctccacc
     4561 gccgcgacca gatcagggtg gcgatgcccg gtattcagca ccgcaatgcc tgcggcgaaa
     4621 tcgatgtatt cgttgccctc tacgtccttc agcgtagcgt tttctgccga ctgggcgaag
     4681 aagttacaca tcacgccaac cccgcgtggg gtagcagaaa gacgacgctg atggaattca
     4741 ttgttgctca tgtttcacac cttttgactc ttcactgtta atcggaaatt aaacgcccag
     4801 acgatcgcgc aggctgtaat aagccgcgcc catcgcggta aatggcacgc gcagcgtgcg
     4861 cccgccgggg aacgggtaat gcggcagatt ggcgaaggca tcgaaacgct cggcgtcacc
     4921 gcgcagcagt tcagcaatca aacgcccggc gaggtgggta caggtgacgc cgtggccgct
     4981 gtagccctgc atgtaataga tgttggtatc gaggcgaccg aactgcggca tccgtgaaag
     5041 ggtcagcagg aagttgcccg tccagcgata gtcgattttg acgcccttca gctgcgggaa
     5101 ggttttcagc agtttcggca caacaagacg ctcaacgtca tccgggtcgc gcgcgccgta
     5161 gaccacgccg ccgtacagca aacggttgtc ggcggtaaga cggtagtaat caagcagata
     5221 attacagtct tccacacagt agtttttcgg gatcagcgaa caggctaaat cttccgacag
     5281 ccgttcggtg gtgatcacct gcgtgccgca cggcatgctg cgtttcgcca gttccggctc
     5341 tactttatcg cccagatacg cattcccggc gacaatcaca tacttcgccg tcacctgacc
     5401 tttggcagtg cgcacaacgg ctggcgtggt gtgctggatc tgcgtcacgg cagaaagttc
     5461 atacacgcgc ccgccgttga ggcggatggc gtccgcttcg ccaatggcga ggtttagcgg
     5521 gtgaatatgc ccaccgctgt gatccagcag cgcaccggta tagcgatcgc tggctacttc
     5581 acggcgaatg gcgttggcgt ccagcaattc cagctgttta ttgccgtagc gttcccagtt
     5641 ctctttctgc tcttcaagtg tggcgagctg tttatcattc atcgccacaa acaggccgcc
     5701 ggggcggtag tcgcagtcaa tctgataacg tttgatacgt tcgcggatga tctcaccacc
     5761 ttcgaacatc atgctgccga gcataggggc ggtgtccatg ccgtagcttt tttcgatcac
     5821 gtcgatgtcg cggctgtagg agttcacaag ctgcccgcca ttgcgcccgc ttgcgccaaa
     5881 gccgatgcgt gaggcttcga gaaccactac gtcaaagccc gcttccgcca gatgcagcgc
     5941 ggaggagagc ccggtatagc cgccgccaac cacgcaaacg tcgcaggtga ttgactcatt
     6001 cagggtgtcg aatggcacgt atttattcgc actggcggcg taataactgc tggtatgttc
     6061 ggtcatttca ggcctccagg cttatccaga tggttttcag ttcggtgaat ttttcaaggg
     6121 catgcaggga tttgtcgcga ccgttgccgc tctgcttata gccgccaaac ggcacggtca
     6181 tatcgccgtc gttgtagtta ttgacgaaga cggaaccggc tttcaggcgg cggctcatac
     6241 ggtgcgcgcg ggagaggtcg cgcatccata ccgccgcgcc aaggccgtac tggctgtcgt
     6301 tggcaagctg tagcgcctgt tcttctgatg tgaaacgcgt gaccaccagc accggaccga
     6361 aaatctcttc gcggcttaag gacgcattcg ggtctacatc cacaaagatg gtcgggccga
     6421 tggcggcagc cagcccggcg ttacggccat ccagcagcag ttgccctttg ccttcgccct
     6481 cacgaataaa gctatggacc gagtcggcgt gggcgcagtc gattaaagtg cccatggtgg
     6541 ttgcggggtc aagcggatgg cccggctgcc agttttgcgc ctgctgtttt aacagggcta
     6601 agaattcatc ggcgatgctc tcttccagca acaggcgtgt tccggcgatg cacacctgac
     6661 cctggttgta gaagatgcct gctgcggtgg agctcgccgc tttttgcaga tccgaacaat
     6721 cggcgaaaac gatgttggcg cttttgccgc ccgcttccag ccagacgcgt ttcatgttgc
     6781 tgtcgcccgc atctttcagc agctgtttcc cggtacgggt tgaaccggta aaggcaatgg
     6841 cgtcgatatc gttatgacgc gacagcgcct gccccgcttc atgaccaaaa cccgtcacca
     6901 cgttcaacac accatccggc aagcctgctt ctttcgccag ccccgcgaga cgaatcgcac
     6961 tgagcggtga tttttcagac ggttttagaa tcacgctgtt tcccgccgcc agcgccgggc
     7021 cgagtttcca gcaagtcagc aacagcggga agttccacgg cacgatggcg gcaatcacgc
     7081 cgaccggttc acgcacgatc atcgccagct catggctact ggtggtcgcc acttcgccat
     7141 acactttgtc gatcgcttcg gcgtaccagc gaatggcgcg cgccgcgccg ggaatatcat
     7201 cacgcagact gtgacgaatc ggtttgccgg tgtcgagagt ttccagcagt gccagctctt
     7261 cggcgtgggc ctccattaaa tcggcgagtt tattcagtac cgctttacgt ttagccggag
     7321 aagagagtga ccagtcgccg cgttcaaata cgccgcgtgc tgcgctcacc gcacggtcga
     7381 tatcgacgct cttgccgcgg gcaattttcg ccagcggtgc ttgggtgacc ggatcaacgg
     7441 tttcaaaggt ttcattttcc gccgcagcag tatattcacc gttaataaat aagcggtttt
     7501 caatggcgag acttaacgct ttatcctgcc agtaagccag atgatgaaaa ttcattatga
     7561 ctcctgtttc acgtctatca gatatatgca gtttgtgaac gtaagggcgc agagatcccc
     7621 gggccgtatg cccgtttatt tctggcgaca ttctttatat acacttcatc cttcaagccg
     7681 cctctgcctt ggctgcgttc gcacccccga atcacttacc tgagtaagct catcgggatt
     7741 cgctcacttg ccgccttgat gcaacttgaa tgattttgtg tatagattgc cgggcgcatt
     7801 gcgcttaccc ggcttacaga acaaaaagat taaaacgtgg tgggcgtatg ggcgctgata
     7861 attcggcaaa tacctgccga cgtattactg aaactgtgcg ggatgccggt attaatggca
     7921 taactttgac ccgcgacgag gtggtaatcc tgaccattaa tcgtcagaac aatttcacct
     7981 tccagtactg tgcctatttc ctcaccctga tgcttaattc tttccccagt ggttgtgccc
     8041 ggctggtacg tttcaaagat catcgccagc gtgcgattcg ggttaccgtt atgaaccagc
     8101 ttcattgaca caccctgact gcccatctca attaagtcgt cctgattaat gacgacctgc
     8161 ggctcatcag gtttttccgg ctcggaaaag aattccgaga gtgacagacc atacaccttc
     8221 agcagctttt gcagcgtact gatggcaggg ctgactttat cttgttctat cgtactgata
     8281 gcactgtgag tcagcccgga gagttcggcg gcacgacgtt gtgaaagccc ctgctgctgg
     8341 cggatttccg acaagcgttt tcctggcgcc agtccctcat cactcatatt tgcatttcct
     8401 taaactgtag tggtcagagt cgctgttttt cagcgatatg gtgctgacaa gcggtgataa
     8461 agccctcgaa caatatacgc gaaagcgcgt actcgctact gttccattcc gggtgccact
     8521 gtacgcccag cgcaaaagga tgattgatga cgctaaccgc ctcaactaag ccatccggcg
     8581 agcgagcttc aacacgcaac cgtgggctaa cgaccttcgc cccttgtcca tgtagagagt
     8641 ttacccaaaa gttgctacat tcaggtaaca acgcagacag taatcccccc tcttcaacct
     8701 gaacttcatg cgacggtgca tattgctgtt ccaccggcag ttcggatctt cccgatgttc
     8761 cagcaattca ggctgttcgc acagcttgcg atgcaacgaa ccaccggttg ccaccaccag
     8821 ttcttgtaaa ccccggcaga tggcgaaaat ggggatgcgc ctttcaagtg cggcattaat
     8881 tatcgccatg ctcagaagat cacgcccggg atcggcgtca ggctcatcgc cgttttcacc
     8941 atataggtgc ggctgcacat tgctgggact accaggaaga taaatgccat cgagtttcgg
     9001 caaaagttgt tcaagtaacg acggttccgc cagcgcatgt ggtagcgcaa ttggcaagcc
     9061 gcctgcgtgg atgatggcat tcaggtactt ttcttgcaga gtctgggtcg catgaccctt
     9121 aagcctgttc ctgcacatta cgacaccgat aaccggattg ttcattatat tttccatgct
     9181 caatctcaca aagtggacta aattatcgcc attactgcgc tttaaatgac ctttatgttc
     9241 aatatttttt tcaatctagc agtgggtttt catttttgaa aactaaattt aacatttgac
     9301 aaacatttag tttgcatgca gattcgaatg atggtcatta tattttacgc tttgataacg
     9361 agcggaaaac aaaccaaagg cgaagaatca tggaaaccaa tatcgttgaa gtagagaact
     9421 ttgttcagca gccagaagag aggcggggta gcgcctttac gcaggaagtg aaacgctacc
     9481 tggagcgcta cccgaatacg caatatgttg atgttttact tactgatttg aatggttgct
     9541 tccgtggaaa acgtatccct gtttcaagcc tgaagaagtt ggagaaaggg tgttatttcc
     9601 cggcctcggt gtttgcaatg gatattctgg gcaacgtagt agaagaagcg ggtctgggtc
     9661 aggaaatggg cgagccggat cgtacttgtg ttcctgttct cggttcctta accccttctg
     9721 ccgccgatcc agagtttatc ggtcagatgc tcctgaccat ggtcgatgaa gatggcgctc
     9781 cctttgacgt tgagccgcgg aacgttctta accgcctgtg gcagcagcta cgccagcgcg
     9841 gattgttccc ggttgtagcg gtagagctgg agttctattt actggatcgt cagcgcgacg
     9901 ctgaagggta tctgcaaccg ccctgcgcgc ccggcaccga tgaccgcaat acacacagcc
     9961 aggtttactc cgttgataac ctcaaccact tcgccgacgt gctcaatgat attgatgaac
    10021 tggcgcagtt acagttaatt cccgccgacg gtgcggtcgc cgaagcctcg ccgggtcagt
    10081 ttgaaatcaa cctttaccat accgataacg tgctggaagc ctgcgatgat gcgctggcgc
    10141 taaaactcct ggtgcgtctg atggcagaaa agcataagat gcacgccact tttatggcga
    10201 agccgtatga agagcacgcg ggcagcggga tgcatatcca tatcagtatg caaaataatc
    10261 gtggcgagaa tgtgctttct gacacagaag gcgaagattc gccgctgctg aaaaagatgc
    10321 tcgccgggat gattgacctg atgccgtcgt cgatggcgtt gctggcacca aacgtgaact
    10381 cgtatcgccg cttccagccg ggaatgtatg tgccgacgca ggcgtcgtgg ggccataaca
    10441 accgcaccgt cgccctgcgt attccgtgcg gcgaccgtca taatcaccgc gtggaatatc
    10501 gcgtggcggg tgccgatgcc aacccatatc tggtgatggc agcgattttt gccggtattt
    10561 tgcatggcct tgataacgag ctgccgttgc aggaagaagt cgaaggcaac gggctggaac
    10621 aggaaggctt acccttcccg attcgccaga gcgatgccct gggtgagttt atcgagaatg
    10681 atcacctgcg ccgctattta ggcgaacggt tttgccatgt gtatcacgcc tgtaaaaatg
    10741 atgagctgtt gcagtttgag cgcctcatca cagaaacaga aattgagtgg atgttgaaaa
    10801 acgcatagta ccccttgcgg ggttgtttca tcaacctgag cggagccagg cctgacattt
    10861 gctggtaatc cagacatttc ccggatgtcg cgttatggag cgcaggcggc aacgggcttc
    10921 cgttaacgat taagactgtg acgaggaaat gagatgatgc cgatgattaa atccccgcat
    10981 ggcgagggag gctgcgtatg cgcccctcct gctactgact ggactccgtc ccctttgctt
    11041 cccttgctaa acaggtttga tttcaggtcg acacgaccgc aaaccttatt acgcagggga
    11101 ggcagcaatt atggctatta attcaccact gaatattgct gcgcaacccg gcaaaacccg
    11161 tctgcgaaaa tcactgaaat tgtggcaggt ggtgatgatg ggtctggcct atctcacgcc
    11221 gatgaccgta tttgatactt ttggtattgt ctccggcatt agcgacggtc acgttccggc
    11281 gtcctatttg ctggcgctgg cgggcgtgct gtttaccgct atcagctacg gcaaactggt
    11341 tcgccagttt ccggaggccg attcggccta tacctacgcg caaaagtcga ttaacccgca
    11401 cgtcggattt atggtcggct ggtcatcgct gctggattat ctctttttgc cgatgatcaa
    11461 cgtcttgttg gcgaaaatct atctctccgc cctcttcccg gaagtgccgc cgtgggtgtg
    11521 cgtagtaacc ttcgtcgcca ttttaaccgc cgcgaatctg aagagcatca acctagtcgc
    11581 taacttcaat accctgtttg tactggtgca aatctccatc atggtggtgt ttatcttcct
    11641 ggtagttcag ggactgcata aaggagaagg cgttggcacc gtctggtcac ttcagccgtt
    11701 tatcagcgag aacgcgcacc tgatcccgat tattaccggg gcgacgattg tctgtttctc
    11761 cttcctcggt ttcgatgcgg tgaccacgct ttcggaagag acgccggacg ccgcacgcgt
    11821 gatcccgaaa gccatcttcc tgacggcggt ctacggtggc gttatcttta tcgcggcgtc
    11881 gttctttatg cagctgttct ttcccgatat cagccgcttt aaagatccgg atgccgcact
    11941 gcctgaaatt gcgctgtacg tcggcggcaa gctcttccag tcgattttcc tctgcaccac
    12001 gtttgtgaac acgttagcct ctggcctggc ttcacatgcc agcgtgtcgc gtctgctgta
    12061 tgtgatgggg cgtgacaatg tgtttccgga gcgcgtgttt ggctatgtgc acccaaaatg
    12121 gcggactccg gcactcaacg tcattatggt cgggattgtc gcgttgtcgg cgctgttctt
    12181 cgatttagtt accgccacag cgttaattaa cttcggtgct ctggtggcgt ttaccttcgt
    12241 gaatctgtcg gtgtttaatc atttctggcg gcgtaaagga atgaataaaa gctggaagga
    12301 tcacttccac tatttgctga tgccgctggt tggcgcgctg acggtgggtg tgctgtgggt
    12361 taacctcgag tcaacgtcac tgacactcgg tctggtatgg gcttcgttag gcggcgcata
    12421 tttatggtat ctgatccgcc gctatcgcaa agtgccgttg tatgatggtg acagaacgcc
    12481 ggtgagtgaa acgtaatagt cggatgcgcg gcacattatc ctgcctgagg gtaatgcacc
    12541 gcgccattaa ctataaaaag atgtatgacc cggatcacga gtgctatcat ccgcccttat
    12601 gcttagcgca ttaaccccag gggcaaataa tgaaccatga tatcccgcta aaatattttg
    12661 atattgccga tgagtacgcg accgaatgcg cagagcctgt cgcagacgct gaacgcacac
    12721 cgctggccca ctacttccag ttactgctca cccgtttgat gaacaatgaa gagatcagcg
    12781 aagaagccca acatgaaatg gctgctgaag cggggattaa tcccgtacgc attgatgaga
    12841 tcgcagagtt tttgaatcaa tggggtaatg agtaattatt taattgcaga cgatcggtca
    12901 gtatcgttgt ccggataaag cgttcacgcc gcatccggct aacaatgaca cgcactgcag
    12961 cgtgctttaa tgggtttctc acgatcgtac cgctctgctc ctcgctaagt tgttctgtga
    13021 gttatagtta tagagaaagc acgggtacga atgttgaaca gatggcgacg ccacctgttc
    13081 aacgaccaac cacacggccc tcattacgcc ccctgaacac aaacggtaat ggcaaatgtc
    13141 attaaatatt agtaagatag cctctttaca taaaatccct taatattatg cgccaggtat
    13201 tatcgtctct tttggtgatt gctggacttg tgagtggtca ggcaatcgcc gcgcctgaat
    13261 cccccccgca tgctgatatc cgcgacagcg gttttgtcta ttgcgtcagc gggcaagtca
    13321 acacctttaa cccatccaaa gcgagcagtg ggttaattgt cgataccctt gccgcccagt
    13381 tttatgatcg actgctggat gtcgatccct atacctatcg cctgatgccg gaacttgccg
    13441 aaagctggga agtactcgac aacggcgcga cctatcgctt ccacctgcgt cgcgatgttc
    13501 cgtttcaaaa aaccgactgg tttactccca ctcgtaaaat gaatgccgac gatgtggtgt
    13561 ttaccttcca gcgaattttt gaccgcaaca acccgtggca taacgtcaac ggcagcaact
    13621 tcccctactt cgacagcctg caatttgccg ataacgtgaa aagcgtccgc aaactggata
    13681 atcataccgt tgagttccga ctcgcccagc cggatgcttc ttttttgtgg cacctcgcaa
    13741 cccattatgc ttcggtcatg tcggcagaat atgcccggaa gttagagaaa gaagatcgcc
    13801 aggagcaact cgaccgtcaa ccggtcggca ccggtccgta tcagttgtcg gaataccgcg
    13861 ccgggcaatt tattcgccta caacgtcatg atgacttctg gcgcggtaaa ccgttaatgc
    13921 cgcaggtagt ggtggattta ggctccggcg gcaccggacg tctgtcgaaa ctcctgaccg
    13981 gggaatgcga cgttctggcc tggcctgctg ccagccagct atccattttg cgtgacgacc
    14041 cgcgcttgcg tttaacgctg cgtcctggga tgaacgtcgc ctatctggca tttaacaccg
    14101 ccaaaccgcc gctaaataat cccgctgtcc gccatgcact ggcactggcg attaataacc
    14161 agcgcctgat gcaatccatc tattatggta cggctgaaac ggcggcctct attttaccgc
    14221 gcgcctcgtg ggcctatgac aacgaggcta aaattactga atacaatccg gcgaaatcgc
    14281 gcgaacagtt gaaggcgttg gggctggaaa acttaacgct gaaactgtgg gtgcccacac
    14341 gttcgcaggc gtggaacccc agtccactga aaactgccga actgattcag gcggatatgg
    14401 cgcaggttgg cgtaaaagtg gtgattgtgc cggtagaagg tcgctttcag gaggcgcggt
    14461 tgatggatat gagccatgat ctgacgttat ccggttgggc gacggacagt aacgacccgg
    14521 acagtttctt ccgtccttta ctgagctgtg cggcaattca ttcacagacc aacctcgccc
    14581 actggtgcga tccgaaattc gacagcgtgt tgcgtaaggc gctctcctcg cagcagctgg
    14641 cggcgcgtat tgaagcctat gacgaagcgc agagtattct ggcgcaggaa ttgcccattt
    14701 tgccgctggc gtcgtcattg cgtttgcagg cctatcggta cgatatcaaa ggtctggtac
    14761 ttagcccgtt tggtaacgcc tcctttgctg gggtgtatcg cgagaaacag gatgaggtga
    14821 aaaaaccatg attatcttca ccttacgccg cattttgtta ttgattgtca ccttgttcct
    14881 gctgaccttc gttggcttca gcttgagcta tttcacccct catgcgccgt tacaaggcgc
    14941 gtcactgtgg aatgcctggg tgttctggtt taacggcctg atccactggg attttggtgt
    15001 ttccagcatt aacggtcaac cgattgccga acagttaaaa gaggtcttcc cggcgacgat
    15061 ggaactgtgc atcctcgcct tcggttttgc gctgattgtt ggcatccccg tggggatgat
    15121 tgccgggatt acgcgccata agtggcagga taacttgatc aacgccatcg ccttactggg
    15181 cttttcaatc ccggtgttct ggctggcgct tctgttgacg ctgttttgtt cactcacgct
    15241 aggttggttg cccgtttcag ggcgtttcga tctgctctac gaagtgaaac cgattaccgg
    15301 ttttgcgttg attgatgcct ggctttcgga ctcaccatgg cgggatgaaa tgatcatgag
    15361 cgcaatccgc catatgatat tgcccgtgat caccctgtcg gttgcgccaa caactgaagt
    15421 gatccgcctg atgcgtatca gcactatcga agtgtatgac cagaactatg taaaagcggc
    15481 ggcgacccgc ggtttgtcgc gctttactat tttgcgtcgc cacgttctgc ataacgcgtt
    15541 accgccggtt attcctcgcc tgggcttaca gttttccacc atgctgacgc tggcgatgat
    15601 caccgaaatg gtttttagct ggccgggttt agggcgctgg ttaattaacg ccatccgcca
    15661 gcaggattac gcagccattt ccgccggagt gatggtgtgt ggctcactgg tcattattgt
    15721 taacgtgatt tctgatattt tgggtgccat ggctaaccct ctgaaacata aggaatggta
    15781 tgccttacga tagcgtatac agcgaaaagc gcccgccggg cacgctgcgt accgcctggc
    15841 gcaaatttta tagtgacgcc tctgcgatgg tcggcctgta cggctgcgcg gggctggctg
    15901 tactgtgtat ttttggcggc tggtttgcgc cttacggcat cgaccagcaa tttctcggtt
    15961 atcaattatt gccgccatca tggtcgcgct atggcgaagt ttctttcttc ctggggactg
    16021 acgacctcgg acgcgatgtt ttaagccgtt tactgagcgg agctgcgcca accgtgggtg
    16081 gcgcatttgt ggtgacgctt gccgcgacga tctgtggcct ggtactgggc accttcgccg
    16141 gggcgacaca cggcctccgc tcagcggtgc ttaaccatat tctggatacc ttactggcga
    16201 tcccttcgct gctgttggca attatcgttg tagcgtttgc cggaccgagt ttgtcccacg
    16261 ctatgtttgc tgtctggctg gcattgctgc cgcgtatggt acgttcgatt tacagcatgg
    16321 tgcatgacga actggaaaaa gagtacgtta tcgccgcccg tctggatggc gcatcaacgc
    16381 tgaatattct ctggtttgct gtgatgccaa acatcaccgc cgggctggtc accgagatca
    16441 cccgcgcact gtcgatggca attctcgata tcgccgcgct gggctttctc gatctcggcg
    16501 cacaactccc ctcgcctgaa tggggagcga tgctcggtga tgcgctggaa ctgatttatg
    16561 tcgccccgtg gactgtcatg ctgccaggtg cggcaattat gattagcgtg ttgttggtta
    16621 acctccttgg cgatggcgtt cgtcgtgcga ttattgcggg ggtggaataa tgccattact
    16681 cgatattcgt aacctgacca ttgaatttaa aaccggtgat gagtgggtta aagccgtcga
    16741 ccgggtaagt atgaccttaa ccgaaggtga aatccgcggt cttgttggtg aatccggttc
    16801 cggcaagagt ttgattgcga aagcgatttg tggggtgaat aaagataact ggcgtgttac
    16861 tgctgaccgt atgcgttttg atgatatcga tttgctgcgt ctctccgcac gcgaacggcg
    16921 caaactggtt ggccataacg tgtcgatgat tttccaggaa ccgcagtcgt gtcttgaccc
    16981 ttcagaacgt gtgggtcgcc agttgatgca aaacatccca gcctggacct ataaaggccg
    17041 ttggtggcag cgttttggct ggcgcaaacg ccgtgccatt gaactgctgc accgcgtggg
    17101 gattaaagat cacaaagatg cgatgcgcag ttttccctat gagttgaccg aaggtgaatg
    17161 tcagaaagtg atgatagcca ttgcactggc gaatcaaccg cgtctgctga ttgctgacga
    17221 accgaccaac tcaatggagc caacaaccca ggcgcaaatc tttcgcctgc tgacgcgtct
    17281 caaccaaaac agcaatacca ctattttgct tatcagccat gacttacaaa tgcttagcca
    17341 atgggcggat aaaattaacg tgctttactg cggtcaaaca gtggaaaccg cgccgagtaa
    17401 ggagttggtg acgatgccac atcatcctta tacccaggcg ctgatccgcg cgataccaga
    17461 cttcggcagc gcgatgccgc ataaaagtcg cctcaatact ctgcccggcg ctatcccact
    17521 gctggaacag ttaccgattg gttgtcgtct ggggccacgt tgcccgtatg cacaacgaga
    17581 atgcattgtg acgccacgtt tgacgggggc gaaaaatcat ctctatgcct gtcatttccc
    17641 gctgaacatg gagaaagagt gagatgatcg aaacgctgct tgaagtgcgt aatttaagta
    17701 aaacgttccg ctaccggacc ggctggtttc gccgtcagac cgtagaagcg gtaaaaccct
    17761 tgagctttac gctacgtgaa ggccagacac tggcgattat tggcgagaat ggttcgggta
    17821 aatccacgct ggcaaaaatg ctggcgggaa tgatagagcc taccagcggc gagttattga
    17881 ttgacgatca tccactgcat tttggcgatt attccttccg cagtcagcgt attcgcatga
    17941 tttttcagga tccttcgacc tcgttgaatc cccgtcaacg tatctcgcaa attctggatt
    18001 ttccactgcg cctgaacacc gacctggaac cggaacagcg tcgcaaacag attattgaaa
    18061 cgatgcgtat ggttgggctg ctaccggatc acgtcagtta ctatccgcat atgttggcac
    18121 ccggacaaaa acagcgtctg ggtctggcgc gcgcgctgat attgcgccca aaagtcatta
    18181 ttgccgatga agcactcgct tcactggata tgtcgatgcg ttcgcagttg attaatctga
    18241 tgctggagtt acaggaaaaa cagggcattt cgtatattta tgttacccag catatcggaa
    18301 tgatgaagca cattagcgac caggtgctgg tgatgcatca gggcgaggtt gtcgagcgag
    18361 gcagcaccgc ggatgtgctg gcatcgccgc tgcatgaact caccaaacgg ctgattgccg
    18421 ggcactttgg cgaagcattg acagcggatg cgtggcgtaa agatcgctaa ttttctgaat
    18481 cctccttcca gattatccac ctcattctga caagagatta aatcttgtca gaatgaggtg
    18541 atggataaaa taaaatcaaa tgcgcgtgat ttaagacgca atctcacttt gcaggaacga
    18601 aagctctggc gatatcttcg cagccgacgt tttggtgatt tcaaatttcg ccgtcaacat
    18661 ccggtgggga gctacattct cgattttgct tgctgctcgg cgcgcgtagt cgttgagctg
    18721 gatggtgggc agcatgattt ggcagttgcc tatgatacca ggcgcactag ctggcttgag
    18781 tcgcagggct ggaccgtgct gcgtttctgg aataacgaga ttgattgtaa tgaggaggcg
    18841 gtgctggaga ttattctgca ggaactgaac cgccgatcac cctcaccctg aaagggcgag
    18901 ggggccgacc gagccgaata gctgttgtgg tgaaaacatg gagacagtgc tggagaatat
    18961 tcggcaaggt ctgaaccatc ccagccatcg ccataaaagg gttaggggct gtatgagcct
    19021 gtttgttgct ggggtaacaa tatttgcaca atatggtccc ctcgcccctc tggggagagg
    19081 gttagtgtaa ggggaaaagc gcccaccctg ccgcagcctg ctccggtcgg acctggcaac
    19141 tatagctact cacagccagg ttgattataa taaccattta tctgttcgta ctgtttacta
    19201 aaacgacgaa tcgcctgatt ttcaggcaca acaagcatca acaataagga ttaaagctat
    19261 gggttttctt tccggtaagc gcattctggt aaccggtgtt gccagcaaac tatccatcgc
    19321 ctacggtatc gctcaggcga tgcaccgcga aggagctgaa ctggcattca cctaccagaa
    19381 cgacaaactg aaaggccgcg tagaagaatt tgccgctcaa ttgggttctg acatcgttct
    19441 gcagtgcgat gttgcagaag atgccagcat cgacaccatg ttcgctgaac tggggaaagt
    19501 ttggccgaaa tttgacggtt tcgtacactc tattggtttt gcacctggcg atcagctgga
    19561 tggtgactat gttaacgccg ttacccgtga aggcttcaaa attgcccacg acatcagctc
    19621 ctacagcttc gttgcaatgg caaaagcttg ccgctccatg ctgaatccgg gttctgccct
    19681 gctgaccctt tcctaccttg gcgctgagcg cgctatcccg aactacaacg ttatgggtct
    19741 ggcaaaagcg tctctggaag cgaacgtgcg ctatatggcg aacgcgatgg gtccggaagg
    19801 tgtgcgtgtt aacgccatct ctgctggtcc gatccgtact ctggcggctt ccggtatcaa
    19861 agacttccgc aaaatgctgg ctcattgcga agccgttacc ccgattcgcc gtaccgttac
    19921 tattgaagat gtgggtaact ccgcggcatt cctgtgctcc gctctctctg ccggtatctc
    19981 cggtgaagtg gtccacgttg acggcggttt cagcatcgct gcaatgaacg aactcgaatt
    20041 gaaataatca ttctgttggt aaatattggg cggcgttctg ccgcccgtta tctctgttat
    20101 acctttctga tatttgttat cgccgatccg tctttctccc cttcccgcct tgcgtcagga
    20161 taacgatttc ctttacgacc aaggagcgcc catggaacaa cgccacatca ccggcaaaag
    20221 ccactggtat catgaaacgc aatccagtac tgcggagtat gacgttctgc ctctggtccc
    20281 ggaagccgca aaggtcagcg atccctttct gctcgacgtg atccttgatg aagaaacgct
    20341 ggctcccttc ctttcatggc tggtccctgc gcgcgttctt gcagtggaat tgttccctga
    20401 ccagcttacc gtgacccgtt cacagacctt caccgcttat gaacgcttgt ctacggccct
    20461 gacggttgct caggtttgcg gcgtccagcg gttatgtaac tactattcgg cgcgacttac
    20521 gccgctcccc gggcctgatt cctctaggga aagcaatcat aggttggcac aaatcacgca
    20581 atatgcccgc caactggcta gctcgccttc tattatcgac aaccgatcgc gccagcatct
    20641 gaatgacgtc gatcttactg cctgggactg tgtgatcatt aaccaaatca ttggttttat
    20701 tggctttcag gcgcggacca ttgcgacatt tcaggcttat ctcgggcacc cggtacgctg
    20761 gttacccggt ctggaaatac aaaactacgc cgacgcgtca ctgtttgctg atgaatcaat
    20821 acgctggcga agcagctatg aggtggaaaa actacctgaa gagtacacaa aaagttcaac
    20881 agcagaactt tgccaactgg ccgaaacact ctctctccac cctatttcac tttcccttct
    20941 cgaaaggttg ttaaacagta cacgggttaa tacacagccg gataataagc ttgcggcgtt
    21001 gttatgcgcg cggataaatg gcagtcctgc ttgttttgcc gcctgtatgg attcatcaaa
    21061 tgaatataaa aaaatcagcc cccttctgcg caagggcgaa aatgaaatta accaatgggc
    21121 tgaccgtcat tctgttgagc acgctaccgt tcaggcgata caatggctga cccgagcacc
    21181 cgatcgcttt agcaccgccc agttcagccc tttactcgaa cacgaacaat catcaacgca
    21241 gattattaat ctgctggtat ggagcgggct gtgtggctgg ataaatcgct taaaaatcgc
    21301 gttgggtgag acatattaac cttgccgcgt cagacagatt cgcgtaaaac tgtcagccgc
    21361 tctaatggcc accaaaatag acaattatgt ttcaggacaa cccgctgcta gcgcagctta
    21421 aacagcaact gcattcccag acgccacgcg ctgaaggggt ggtaaaagcc acagaaaaag
    21481 gctttggctt cctggaagtc gacgcgcaaa aaagttattt cattccgccg ccgcagatga
    21541 aaaaagtcat gcatggcgac cgaattatcg cggtgatcca cagtgaaaaa gaacgtgaat
    21601 ccgcagagcc agaagaactg gttgaaccgt tcctgactcg tttcgtgggt aaagttcagg
    21661 gcaaaaatga ccgtctggcc atcgttcctg atcatccact cttaaaagac gccattcctt
    21721 gccgcgcagc ccgtggcctg aaccacgagt ttaaagaagg cgactgggcg gttgccgaaa
    21781 tgcgccgtca tccgctgaaa ggcgatcgtt ctttctatgc tgaattgaca caatacatca
    21841 cttttggtga cgaccacttt gtaccgtggt gggttacact tgcgcgccat aatctggaaa
    21901 aagaagcacc agacggcgtc gctaccgaaa tgctcgatga aggtctggtt cgtgaagatc
    21961 tgaccgcgct ggattttgtc accatcgaca gtgccagcac agaagatatg gatgacgccc
    22021 ttttcgctaa ggcgttgccg gatgacaaac ttcagctgat tgtggcgatt gccgatccaa
    22081 ccgcgtggat tgctgaaggc agcaagctgg acaaagccgc gaaaattcgc gcattcacca
    22141 actatctgcc tggcttcaac atccctatgc tgcctcgcga gctttctgac gatctctgct
    22201 cactgcgcgc caatgaagtc cgcccggtac tggcatgccg catgacgctc tccgctgatg
    22261 gcgccattga agataatatc gaattctttg ccgccaccat cgaatccaaa gcaaagctgg
    22321 tgtatgacca ggtttctgac tggctggaaa ataccggtga ctggcagcct gaaagtgaag
    22381 caattgccga acaagtccgt ttgctagcgc aaatttgcca acgccgcggc gagtggcgtc
    22441 ataaccacgc actggtgttt aaagatcgcc cggattaccg ctttattctc ggtgaaaaag
    22501 gtgaagtgct ggatatcgtc gccgagcctc gtcgcattgc caaccgtatc gtcgaagaag
    22561 cgatgattgc cgctaacatt tgtgcggccc gcgtactgcg cgataagctc ggttttggca
    22621 tctataacgt gcatatgggc tttgatccgg cgaatgccga cgcgctggca gcgttgctga
    22681 aaacgcacgg tctgcatgtc gatgccgaag aagtgctcac gctggacggt ttctgcaaac
    22741 tgcgtcgtga actggacgcg caaccaactg gtttcctcga cagccgcatt cgtcgcttcc
    22801 agtcatttgc tgaaattagc actgaacccg gtcctcactt tggcctcggt ctggaagcat
    22861 acgccacctg gacttcgccg atccgtaaat atggcgacat gatcaaccac cgtctgctga
    22921 aagcggttat caaaggcgaa actgcgacgc gcccacagga tgaaatcact gtccaaatgg
    22981 ccgagcgtcg ccgtctcaac cggatggcag aacgtgatgt tggtgactgg ttatacgcac
    23041 gcttcctgaa agacaaagcc gggaccgaca cccgtttcgc agcggaaatt gtcgatatca
    23101 gccgtggcgg catgcgtgtg cgtttggttg ataacggcgc tatcgccttt attccggcac
    23161 ctttcttaca cgctatgcgc gatgaactgg tttgcagcca ggaaaacggc actgtacaaa
    23221 ttaaaggtga aacggtttac aaagtaactg acgttattga cgtcaccatt gccgaagtcc
    23281 gcatggaaac ccgcagcatt attgcgcgcc cggtcgcgta atctcctttc acggcctatt
    23341 cctcatggat gggccgttta tttccccgct ctaccttcgt tatatccagg cagatttttt
    23401 aactgacttt cgtttgaaaa ctggcgtttt tccaaaactg gattacaaat aaatatataa
    23461 aaaaaacaat gcgtttagcc gccgttaatt tcatgtaagt ca
//
LOCUS       DADMHC010000046        23273 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.046, whole genome shotgun sequence.
ACCESSION   DADMHC010000046 DADMHC010000000
VERSION     DADMHC010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 23273)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23273)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23273
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.046"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..674)
                     /locus_tag="JNZ57_001524"
     CDS             complement(<1..674)
                     /locus_tag="JNZ57_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter"
                     /protein_id="HAY8827793.1"
                     /translation="MRNKLSFDLQLSARKAAIAERIAVHKIARSKVSVFLMAMSAGVF
                     MAIGFTFYLSVIADAPSSQALTHLVGGLCFTLGFILLAVCGTSLFTSSVMTVMAKSRG
                     VISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAMWGVAVLHCAEGKMHHTF
                     TESVSLGIMCNLMVCLALWMSYCGRSLCDKIVAMILPITLFVASGFEHCIANLFVIPF
                     AIAIRH"
     gene            complement(696..2708)
                     /locus_tag="JNZ57_001525"
                     /pseudo
     CDS             complement(696..2708)
                     /locus_tag="JNZ57_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416986.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
     gene            complement(2738..3151)
                     /gene="hyfJ"
                     /locus_tag="JNZ57_001526"
     CDS             complement(2738..3151)
                     /gene="hyfJ"
                     /locus_tag="JNZ57_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416985.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 assembly chaperone HyfJ"
                     /protein_id="HAY8827794.1"
                     /translation="MTEECGEIVFWTLRKKFVASSDEMPEHSSQVMYYSLAIGHHVGV
                     IDCLNVAFRCPLTENEDWLAQVEEEQARRKMLGVMTFGEIVIDASHTALLTRAFALLA
                     DDATSVWQARSIQFIHLLDEIVQEPAIYLMARKIA"
     gene            complement(3144..3902)
                     /gene="hyfI"
                     /locus_tag="JNZ57_001527"
     CDS             complement(3144..3902)
                     /gene="hyfI"
                     /locus_tag="JNZ57_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 catalytic subunit HyfI"
                     /protein_id="HAY8827795.1"
                     /translation="MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGC
                     NACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH
                     KICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ
                     QKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRLGREICDRLLRHLSDD
                     PTGNRVNTWLRDADDPRLNSIVQQLFRVLRGLHD"
     gene            complement(3899..4438)
                     /gene="hyfH"
                     /locus_tag="JNZ57_001528"
     CDS             complement(3899..4438)
                     /gene="hyfH"
                     /locus_tag="JNZ57_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit H"
                     /protein_id="HAY8827796.1"
                     /translation="MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACG
                     ACTCPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA
                     DLYTRATFHLQRCSRCERPFAPQKTVALAAELLAQQQNAPQNREMLRAQASVCPECKQ
                     RATLINDDTDVPLVAKEQL"
     gene            complement(4448..6163)
                     /gene="hyfG"
                     /locus_tag="JNZ57_001529"
     CDS             complement(4448..6163)
                     /gene="hyfG"
                     /locus_tag="JNZ57_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 catalytic subunit HyfG"
                     /protein_id="HAY8827797.1"
                     /translation="MNVNSSSNRGEAILAALKTQFPGAVLDEERQTPEQVTITVKINL
                     LPDVVHYLYYQHDGWLPVLFGNDERTLNGHYAVYYALSMEGAEKCWIVVKALVDADSR
                     EFPSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRRLVLPDDWPEDMHPLRKDAMDYRL
                     RPEPTTDSETYAFINEGNSDARVIPVGPLHITSDEPGHFRLFVDGEQIVDADYRLFYV
                     HRGMEKLAETRMGYNEVTFLSDRVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSI
                     LLEVERLHSHLLNLGLSCHFVGFDTGFMQFFRVREKSMTMAELLTGSRKTYGLNLIGG
                     VRRDILKEQRLQTLKLVREMRADVSELVEMLLATPNMEQRTQDIGILDRQIARDYSPV
                     GPLIRGSGFARDLRFDHPYADYGNIPKTLFTFTGGDVFSRVMVRVKETFDSLAMLEFA
                     LDNMLDTPLLTEGFSYKPHAFALGFVEAPRGEDVHWSMLGDNQKLFRWRCRAATYANW
                     PVLRYMLRGNTVSDAPLIIGSLDPCYSCTDRVTLVDVRKRQSKTVPYKEIERYGIDRN
                     RSPLK"
     gene            complement(6160..7707)
                     /gene="hyfF"
                     /locus_tag="JNZ57_001530"
     CDS             complement(6160..7707)
                     /gene="hyfF"
                     /locus_tag="JNZ57_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004974157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit F"
                     /protein_id="HAY8827798.1"
                     /translation="MFALLLLTPLLFSLLCFACRKRGLSATCTVTVLHSLGITLLLIL
                     ALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGVYSIGYMRHEVAHGEL
                     SPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLESA
                     WKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEILKQSSLLDPTLMLLAFV
                     FVLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIG
                     SDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVALGIGGPLGIFA
                     ALLHTLNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGM
                     PPFNIFLSEFMTVTAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRG
                     DLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTFAFRHR
                     ICFGETQ"
     gene            complement(7727..8377)
                     /gene="hyfE"
                     /locus_tag="JNZ57_001531"
     CDS             complement(7727..8377)
                     /gene="hyfE"
                     /locus_tag="JNZ57_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 membrane subunit"
                     /protein_id="HAY8827799.1"
                     /translation="MIGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSI
                     FATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLA
                     ALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMEN
                     GSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG"
     gene            complement(8389..9496)
                     /locus_tag="JNZ57_001532"
                     /pseudo
     CDS             complement(8389..9496)
                     /locus_tag="JNZ57_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001442177.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit D"
     gene            complement(9508..9618)
                     /locus_tag="JNZ57_001533"
     CDS             complement(9508..9618)
                     /locus_tag="JNZ57_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000429114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoin racemase"
                     /protein_id="HAY8827800.1"
                     /translation="MENLALTTLMLPFIGALVVSFSPQRRAAEWGFCSPH"
     gene            complement(9635..10579)
                     /gene="hyfC"
                     /locus_tag="JNZ57_001534"
     CDS             complement(9635..10579)
                     /gene="hyfC"
                     /locus_tag="JNZ57_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311372.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit HyfC"
                     /protein_id="HAY8827801.1"
                     /translation="MRQTLCDEYLVIFALAQAVILLLTPLFTGISQQIRARMHSRRGP
                     GIWQDYREIHKLFKRQEVAPISSGLMFRLMPWVLISSMLVLAMALPLFITVSPFAGGG
                     DLITLIYLLALFRFFFALSGLDTGSPFAGVGASRELTLGILVEPMLILSLLVLALIAG
                     STHIEMISNTLATGWNSPLTTVLALLACGFACFIEMGKIPFDVAEAEQELQEGPLTEY
                     SGAGLALAKWGLGLKQVVMAALFVALFLPFGRAQELSLACLLTSLVVTLLKVLLIFVL
                     ASIAENTLARGRFLLIHHVTWLGFSLAALAWVFWLTGL"
     gene            complement(10590..12608)
                     /gene="hyfB"
                     /locus_tag="JNZ57_001535"
                     /pseudo
     CDS             complement(10590..12608)
                     /gene="hyfB"
                     /locus_tag="JNZ57_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311371.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit B"
     gene            complement(12608..13225)
                     /gene="hyfA"
                     /locus_tag="JNZ57_001536"
     CDS             complement(12608..13225)
                     /gene="hyfA"
                     /locus_tag="JNZ57_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit HyfA"
                     /protein_id="HAY8827802.1"
                     /translation="MNRFVVAEPLWCTGCNTCLATCSDVHKTQGLQQHPRLALAKTST
                     ITAPVVCHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAISASGS
                     RPVNAPAQYVFQADGSLKDGEENAPTQHALLRWEPGVQTVAVKCDLCNFLPEGPACVR
                     ACPNQALRLITDDSLQRQMKEKQRLAASWFANGGEDPLSLTQEQH"
     gene            complement(13478..13948)
                     /gene="bcp"
                     /locus_tag="JNZ57_001537"
     CDS             complement(13478..13948)
                     /gene="bcp"
                     /locus_tag="JNZ57_001537"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HAY8827803.1"
                     /translation="MNPLKAGDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTP
                     GCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQ
                     FGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFDDFKTSNHHDVVLNWLKEHA"
     gene            complement(13948..14520)
                     /locus_tag="JNZ57_001538"
     CDS             complement(13948..14520)
                     /locus_tag="JNZ57_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system transcriptional
                     repressor"
                     /protein_id="HAY8827804.1"
                     /translation="MTLSSQHYLVITALGADRPGIVNTITRHVSSCGCNIEDSRLAML
                     GEEFTFIMLLSGSWNAITLIESTLPLKGAELDLLIVMKRTTARPRPPMPASVWVQVDV
                     ADSPHLIERFTALFDAHHMNIAELVSRTQPAENERAAQLHIQITAHSPASADAANIEQ
                     AFKALCTELNAQGSINVVNYSQHDEQDGVK"
     gene            14666..15544
                     /gene="dapA"
                     /locus_tag="JNZ57_001539"
     CDS             14666..15544
                     /gene="dapA"
                     /locus_tag="JNZ57_001539"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001311023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HAY8827805.1"
                     /translation="MFTGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGT
                     TGESATLNHDEHADVVMMTLELADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLT
                     VTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGI
                     KEATGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMC
                     KLAAEGHFAEARVINQRLMPLHNKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITD
                     SGRETVRAALKHAGLL"
     gene            15561..16595
                     /gene="bamC"
                     /locus_tag="JNZ57_001540"
     CDS             15561..16595
                     /gene="bamC"
                     /locus_tag="JNZ57_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708316.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HAY8827806.1"
                     /translation="MAYSVQKSRLAKVAGVSLILLLAACSSDSRYKRQVSGDEAYLEA
                     APLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGVRTQFTGD
                     TASLLVENGRGNTLWPQVVCVLQAKNYTITQRDDAGQTLTIDWVQWNRLDEDEQYRGR
                     YQISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLDKSASDAAN
                     AAQNRASTTMDVQSAADDTGLPMLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNM
                     AVTYKPLSDSDWQELGASDPGLASGDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDAL
                     VAVFQAAFSK"
     gene            16808..17521
                     /gene="purC"
                     /locus_tag="JNZ57_001541"
     CDS             16808..17521
                     /gene="purC"
                     /locus_tag="JNZ57_001541"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HAY8827807.1"
                     /translation="MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFD
                     RKGMVNNKFNYFIMSKLAEAGIPTQMERLLSDTECLVKKLDMVPVECVVRNRAAGSLV
                     KRLGIEEGIELNPPLFDLFLKNDAMHDPMVNESYCETFGWVSKENLARMKELTYKAND
                     VLKKLFDDAGLILVDFKLEFGLYKGEVVLGDEFSPDGSRLWDKETLEKMDKDRFRQSL
                     GGLIEAYEAVARRLGVQLD"
     gene            17689..18552
                     /locus_tag="JNZ57_001542"
     CDS             17689..18552
                     /locus_tag="JNZ57_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HAY8827808.1"
                     /translation="MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVV
                     LVAGYYGVDLTGLMTGQPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMG
                     KTYQQPKLVMYRGMTRTGCGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFA
                     QGYVIAHEVGHHVQKLLGIEPKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHNMQ
                     QQGVLETGDLEEALNAAQAIGDDRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGD
                     PAQCNTFGKSI"
     gene            18567..20582
                     /locus_tag="JNZ57_001543"
     CDS             18567..20582
                     /locus_tag="JNZ57_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(Met) cytidine acetyltransferase"
                     /protein_id="HAY8827809.1"
                     /translation="MAELTALYTLTAQMKREGIRRLLVLSGEEGWCFDHALKLRDALL
                     GDWLWISPQPDAENHCSPSVLQTLLGREFRHAVFDARHGFDAAAFAALSGTLKAGSWL
                     VLLLPVWEEWENQPDADSLRWSDCPDPIATPHFVQHLKRVLTADNDAILWRQNQPFSL
                     AHFTPRTDWHPATGAPQPEQQQLLQQLLTMLPGVAAVTAARGRGKSALAGQLISRIAG
                     SAIVTAPAKAATDVLAQFAGEKFRFIAPDALLASDEQADWLVVDEAAAIPAPLLHQLV
                     SRFPRTLLTTTVQGYEGTGRGFLLKFCARFPHLHRFELQQPIRWAQGCPLEKMVSEAL
                     VFDDENFTHTPQGNIVISAFEQTLWRSEPETPLKVYQLLSGAHYRTSPLDLRRMMDAP
                     GQYFLQAAGENEIAGALWLVDEGGLSQQLSQAVWAGFRRPRGNLVAQSLAAHGSNPLA
                     ATLRGRRVSRIAVHPARQREGVGQQLIASALQYTQDLDYLSVSFGYTGELWRFWQRCG
                     FVLVRMGNHREASSGCYTAMALLPMSDAGKQLAEREHYRLRRDAQALAQWNGETLPVD
                     PLNDIVLSDDDWLELAGFAFAHRPLLTSLGCLLRLLQTSELALPALRGRLQKNASDAQ
                     LCTTLKLAGRKMLLVRQREEAAHALFALNDVRTERLRDRITQWQFFH"
     gene            20656..21354
                     /gene="ypfH"
                     /locus_tag="JNZ57_001544"
     CDS             20656..21354
                     /gene="ypfH"
                     /locus_tag="JNZ57_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311362.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HAY8827810.1"
                     /translation="MKHDHFVVQSPDKPVQQLLLLFHGVGDNSVAMGEIGSWFAPLFP
                     DALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGA
                     NATALIGFSQGAIMALESIKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDP
                     VIDLAHAVAAQEALISAGGDVTLDIVEDLGHAIDNRSMQFALDHLRYTIPKHYFDEAL
                     SGGKPGDDDVIEMM"
     gene            complement(21464..21664)
                     /locus_tag="JNZ57_001545"
     CDS             complement(21464..21664)
                     /locus_tag="JNZ57_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpfN family protein"
                     /protein_id="HAY8827811.1"
                     /translation="MDWLAKYWWILVIVFLVGVLLNVIKDLKRVDHKKFLANKPELPP
                     HRDFNDKWDDDDDWPKKDQPKK"
     gene            complement(21692..22819)
                     /gene="dapE"
                     /locus_tag="JNZ57_001546"
     CDS             complement(21692..22819)
                     /gene="dapE"
                     /locus_tag="JNZ57_001546"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020078199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HAY8827812.1"
                     /translation="MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMD
                     FADTQNFWAWRGQGETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKG
                     SLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLV
                     GEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIE
                     WDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLE
                     KHQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMG
                     AQVVELGPVNATIHKINECVNTADLQLLARMYQRIMEQLVA"
     gene            complement(22823..23179)
                     /locus_tag="JNZ57_001547"
     CDS             complement(22823..23179)
                     /locus_tag="JNZ57_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family reductase"
                     /protein_id="HAY8827813.1"
                     /translation="MVTLYGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLNG
                     FINELGWEALLNTRGTTWRKLDETTRNKITDAASAAALMTEMPSIIKRPLLCAPGKPM
                     LLGFSDSSYQQFFHEV"
BASE COUNT         5831 a         6129 c         6222 g         5091 t
ORIGIN      
        1 aaatggcgaa tggcaatggc gaacggaatc acaaacaaat tggcgataca gtgctcaaag
       61 ccactggcga caaacagggt gatgggcaaa atcatggcga cgattttgtc gcataacgaa
      121 cgcccgcaat aactcatcca cagcgccagg caaaccatca gattgcacat aatgccgagg
      181 ctgacagatt cagtaaatgt atgatgcatt ttgccctcgg cgcagtgtaa aaccgcgact
      241 ccccacatcg cgttttcact catcaccagc ccggaaaacc agattaacaa actgaaacag
      301 gcaatacctg ccagattacc acaggccacc agaagtgcgt taatcagcca agttcgccaa
      361 ctaataacgc cccgactttt tgccatcacc gtcattaccg acgaggtgaa caggctggtg
      421 ccgcaaaccg ccagcaaaat aaagccgagt gtaaagcaaa ggccgcccac cagatgggtt
      481 aatgcctgtg aagacggggc atcggcgata acggaaaggt aaaaagtaaa tccgatcgcc
      541 ataaacacgc cagcggacat cgccattaaa aagaccgaca ctttactgcg ggcaatttta
      601 tggacggcaa tccgttcagc gattgccgct tttctggcgc tcaactgcaa gtcgaaagag
      661 agtttgtttc tcatgcatac tcctgcaaaa gcagattaca acacctcgcg aaccgagatc
      721 cccagacgct gcattcgtga cagcagcgtg gtgcgcttca tccctaatcg tgtcgccgcg
      781 ccacggggcc cggcaacaat gccattggtt tctcgcaata cctgaacaat gcgctgacgt
      841 tcttcttcgt cattctctgg cgtcgtcggg tgcagcaact gcgccattga actgcgaagc
      901 gctgaatctt catttagcgt cggcagtaaa cggctttgtc ggacattaag atgtaaattc
      961 agactgttac cgcgagtcag cagtactgct cgctcaatca cgttttccag ctcgtgcacg
     1021 ttgcccggcc agtcccacga catcaactgg cgtagcgcct cggtcgggat ggcgtcaatt
     1081 gcgcgattca tatggcgcgc cattttttgc gtgaaatgtt ttgctaaaag agggatatct
     1141 tccggacggt cgcgtagcgg cggcaattcc aatgggaaga cattcaggcg ataaaagaga
     1201 tcgctgcgaa actggcgatc ttcaaccatt tgccacaaat cacggttggt ggcggcaatg
     1261 actctgacat tcaccgggat cgttctactc ccgccgagac gctcaatctc ccgttcctgc
     1321 aatacgcgca gcagtttagg ctgaagttct aacggcagat cgccaatttc atcgagaaac
     1381 aacgtgccgc catcggcaat ttcaaaacga tcacgatgtg tattaatcgc accagtaaac
     1441 gcccctttgt catgaccgaa taactcactt tccagaagac tggcagggat ggcagcgcag
     1501 ttgattttga ccagcggttt gtcgcgtcgc gtgctaagtt gatggatcgc tctggcgatc
     1561 acctctttgc cggttccggt ttcaccacaa atcaataccg tactgtcgct cttcgctaca
     1621 atatctacct gctggagcag gtcttccatt gcctggcttt gatagataat gtcaccgatg
     1681 cccagattcg aaaggagctg ctcgctaagc tggtagtttt cttgctgcaa actttcctgc
     1741 aaatcggtca tgctacgcca ggcatcggca ttgccaacgg caatagcgat gcgatcggct
     1801 atgtgttgta gtagctggca gttttcctca ctaaagagag tggaagaggt atgcgccagc
     1861 aacaatgcac ccggtgtatg gttgccaaag gtaagcggta taaggagcgc agattcgcag
     1921 ccgttagatg caagtaagag taataacggg tcgcgttgcc agagaaacag atcgtctgca
     1981 cggtgcgtca aggtcggttg tcgggtttgt agcgtttgtg tcagcaatac actgtcgcca
     2041 ggcatattgc gtggcagaca cgcacaatgt gaggcagaaa gatcgctgca ccacaggcta
     2101 aacttctcgt tctttcgatg atcgcccagt accatactga ctgaagccag accgaaaaaa
     2161 tgatggatct cacgagcgac gtcagcgatc agatcgtcga gatcaagatg tgacagcact
     2221 gcattagtaa tatcaaccag tacccgatga tgatcgcgat ctttctccag caaacgcagc
     2281 gccacctgtt gttcttcatc attgagccat gattgcagaa ccggagtgat aatgcgtgcc
     2341 agccagttaa acagtgtgca atcctaggga gtaaaacggc tgccgtgggt acgaataaag
     2401 cgtagctccg ccattccact actgccgaga aggacggcgt gacgagaata atcgaccatc
     2461 tcgccctgat actctgttgt tgccgtcaca tcgctgccat catcatggta gcggtaatag
     2521 aagttgcttt tgataacatg cagttcaata agttgtaccg ggctgaacgg cggcggcatc
     2581 gggatgaagg cgcgtaataa agacgcctta ccgtgtttct gtgctaaccg ctccgcgagc
     2641 attccgttta ccgcttcaat tgttattcct tgtggcgggg caaacatcgc ctcgtctgac
     2701 atagccatca acagtcctta ttaatgagaa atccttctca cgcaattttt ctggccatca
     2761 gatagatggc cggttcctgc acaatttcat ccaacagatg aatgaattga atgctacgcg
     2821 cctgccacac agacgtcgcg tcatctgcca gtagcgcgaa tgcccgggtc aacagggcgg
     2881 tgtggctggc gtcaataaca atctcaccaa aggtcatcac ccccagcatc ttacgtcggg
     2941 cttgctcctc ttcgacctgt gcaagccaat cttcgttttc cgtcagtggg cagcggaagg
     3001 cgacattcag acaatcaatc acgccaacgt gatggccgat agccagcgag taatacatta
     3061 cctgagagct gtgttccggc atctcgtcgc tactggcgac aaactttttt cgcagcgtcc
     3121 agaaaacaat ttccccgcac tcttcagtca tgtaaccccc ggagtacgcg aaagagttgc
     3181 tgaacgatac tattgagacg tggatcgtcg gcatcgcgca accaggtgtt aacccgattt
     3241 cctgtaggat cgtcgcttaa atggcgcagg agccgatcgc aaatttctcg ccccagacga
     3301 tagcccgcca gccgccgcgc ttctcgctca atggcgatac gctgtgatgg cgggatctgt
     3361 ggccacaacg gttgcatagt caccccggtg ggatcgcgat aatccacagc gtgaatcttc
     3421 tgttgcagca aaccgagcgc cacggcgaaa ccgtgaatgg tggcggccgg tgttggcggg
     3481 cagccgggga tccaaacatc aatggggaca atggtgtcgc tgccgcccca gacgctgtag
     3541 agatcgtgga aaataccgcc gccgacaccg cacgcgccgt aggaaacaca gattttatga
     3601 tcgggggcag actcatacgc ccgaagtgca ggcatacgca tcgcccgggt gactgcgcca
     3661 gtaaataaca aaatatcggc gtgacgcggt gatgaaacaa ccttaatgcc aaaacgttct
     3721 gcgtcgaata cgggggtgat ggcagcaaaa atttcgattt cacaggcgtt gcagccgccg
     3781 caatcgacgc gataaacgta ggctgagcga cggatatcct gtagcaaatg ccgcttcatc
     3841 ttttgcgttt gctcatccag cgtgatgggc tggctgacat gttgtgtaag cactggactc
     3901 atagctgctc cttagccacc agcggtacat ctgtatcgtc gttgatcagc gtcgcgcgtt
     3961 gtttgcactc cgggcagacg ctcgcttgcg cccgcaacat ttcgcggttt tgtggcgcat
     4021 tttgttgctg tgccaacaat tcagcagcca gtgcgacggt tttttgcggg gcaaacgggc
     4081 gttcgcaacg gctgcaacgt tgtagatgga acgtcgcgcg ggtatagaga tcggctttat
     4141 tggtgacggt cagttcaaag ttattggtaa gctggatggc tctggtcggg cacacttctt
     4201 cacaacgtcc gcagtaaata caacgcccca gatagagctg ccaggtgcgc gaattttgct
     4261 ggtcgtcggt ctggatagtc agcgcatttg ccggacaagt acaggcgccg caggcaatac
     4321 attggctggg catcaggtcc ggtttcccgc gaaagcctgg gctgacctcc agtggcgcga
     4381 agggatattt caccgtcgcg gttccggcgc gcataatagt tttcagtaac ttcagcatct
     4441 tctgtcctta cttcagcggc gaacggttac gatcaatgcc gtagcgttcg atctctttat
     4501 acggcacggt ttttgactgg cgcttgcgca catctaccag cgtcacacgg tcggtacagg
     4561 agtagcaggg atcaaggcta ccgataatca gcggtgcgtc agaaacggta ttgccgcgca
     4621 gcatgtaacg caacaccggc cagttggcgt aggtggcggc acggcagcgc cagcggaaca
     4681 atttttggtt atcaccgagc atgctccagt gcacgtcttc accgcgtggc gcttcaacaa
     4741 agcccagcgc gaatgcgtga ggtttatagc taaagccttc ggtcagcagt ggggtatcca
     4801 gcatgttgtc gagggcaaat tccagcattg ccagcgaatc aaacgtctct ttgacacgga
     4861 ccatcacgcg ggagaaaaca tcgccgccgg tgaaggtaaa cagtgttttt ggaatattgc
     4921 cgtagtcggc gtaggggtga tcaaagcgca aatcacgggc aaaaccactg ccgcggatca
     4981 gcggccctac agggctataa tcacgggcga tttgtcggtc gagaatgcca atgtcctgag
     5041 tgcgttgttc catattcggc gtagcaagca gcatctctac cagctccgac acgtcggcgc
     5101 gcatctcgcg caccagtttc agcgtttgca gacgttgctc tttgagaata tcgcggcgaa
     5161 caccaccaat cagattcaga ccgtaggttt tacgcgaccc ggtcagcaat tccgccatcg
     5221 tcatcgactt ttcccgcacg cggaaaaatt gcataaagcc ggtatcaaaa ccaacaaaat
     5281 ggcaggagag gccaaggttg agcaaatgac tgtgtagccg ttcgacttcc agcagaatcg
     5341 agcgaatggt atgcgctcgt tgcggcacct caatccccag tgcattttca accgagttgg
     5401 tataggccac actgtgggca aaaccgcaaa tcccacacac gcggtccgat aagaaggtca
     5461 cttcgttgta gcccatccgc gtttctgcca gtttctccat gccgcgatgg acataaaaca
     5521 ggcggtaatc agcatcgaca atttgctcgc catccacaaa caagcggaag tgacccggtt
     5581 catcggaggt gatatgcagc gggccgacag ggatcacccg cgcatcgctg ttgccctcat
     5641 tgataaacgc atacgtttcg gaatctgtcg tcggttcagg gcgcagtcga taatccatcg
     5701 catctttgcg cagcggatgc atatcttccg gccagtcatc gggcaacacc aggcgacgct
     5761 gatccggcag gccaaccgga atcagcccgt acatatcgcg aatttctcgc tcgccccaga
     5821 ccgcggcagg gacgcgcggt gtgactgacg gaaactcccg actgtcggca tcgaccagtg
     5881 ccttcaccac gatccagcat ttttcggccc cttccattga aagggcataa taaaccgcgt
     5941 aatgaccgtt aagtgtccgc tcgtcgttgc caaacaggac tggaagccag ccatcatgtt
     6001 gataataaag ataatgtaca acgtcaggca gcagattgat tttcaccgta atggtgacct
     6061 gttcaggcgt ttgtcgctct tcatccagca ccgcgccggg gaactgcgtt ttcagggcgg
     6121 cgagaatcgc ttcgccacga tttgacgatg aattaacgtt cactgtgttt ctccgaaaca
     6181 gatgcggtgc ctgaaggcaa aagtgctacg ttgtgcaggc aggtcgtgcg tccctgagag
     6241 gactatagtg gaagcgcccg ccaggatcct gatgacaggt tgtggaatat gcgttcccat
     6301 cgccagcatc atgaccagca gaatcaccat tggcgaggtg gtcaaccagc cgagatcacc
     6361 ccggttaacg gcctgcggcg gtttcgccat taacacccgc gcagccatcc gtaccaggcc
     6421 cgccagcacc agcgttaaca gcaataacag caggacgata atcagcaggt gattacgtgc
     6481 cagtcctgcg gtaacggtca taaattcgct aagaaaaatg ttgaagggcg gcatccctgc
     6541 cagcgccagc gcaccgccgc caaacagcac ggcggtaaat ggcatgattt tgagcatccc
     6601 acagacgacg ttgagatcgc gcgtgccgta cttgagcagt acattgccgg aaccgcagaa
     6661 cagcagcgtt tttgccagac tgtggtttaa ggtgtgcagc agcgcggcaa aaattcccag
     6721 cggcccgcca atgcctagcg ccaccgcgac cagccccatg ttctccacgc tggagtacgc
     6781 cagcagacgc ttaatgtccc gctgtaccag aatgaaaaat gccgccacgg caaccgacaa
     6841 catgccgaag atgagcaaca accggttggg gaaatcgctg ccgatggctt ggcaaataat
     6901 gatgtaatag cgaatcagca ccaacagcgc gcagttcagc aatacggcgg agagcagggc
     6961 gctgaccgga ctcggcgctt cactgtgagc atccggcagc caggcgtgca tgggaaatag
     7021 cccggttttg gtaccaaagc caattagcac aaacacaaag gccaacagca ttaatgttgg
     7081 gtcaagcaag gacgattgct taagaatctc gctccagaat atcgccattt ctgcctgcgg
     7141 cataacgctg gcggcgttgg cgtataccag cacggtaccg aacagaccaa aagcgacacc
     7201 aacagtacaa ataatgatgt acttccatgc tgattccagc gatgaacgct gaccgtaaat
     7261 gcctaccaga aacgccgagc ttaaggtggt ggcttcgatc gccgcccaca tcacaatcag
     7321 gttattgctg gtaacaacca gcagcatggt gaacaaaaac agatggaaga aaccgtagta
     7381 atcgcacagt gtaacgggtg aaagctcgcc gtgtgccact tcatgacgca tgtagccaat
     7441 cgagtaaaca ccggtgagaa agccaatcac accaagaatg gcgaggaaca aaccgcccag
     7501 accatcaata tgaagccaca gtcccgcagc gaatatttct cctgcatcag cggcagtttg
     7561 gaccacccag agtgccagaa tcagcagcag tgtgatccct aagctatgta atacagtcac
     7621 cgtacaagtc gcagagagcc cccgtttccg gcaggcaaaa cagagcagcg aaaaaagcag
     7681 cggcgtgagc aggagtaaag cgaacatcac agaataactc atctcattat cccttcagcg
     7741 cggtcaagtt gttcacgtcc agcgtgccgt gggtacgcca tatttttctt gccagtaaca
     7801 ccatcacaat gacggcgaag atggcgtcgg tagcgatacc tatttccacc agttccggtg
     7861 ctcgccaggc aagaagcgcc agcaccagat gggagccgtt ttccatcagg cagtaaccaa
     7921 aaatttgccg caggatattg cgctggctga caatgcacag caggccaagc agaaaatgac
     7981 ctaacgctac cgccagcgcc ggtttcagcc cggtagccat cggtagcttc acgggctgaa
     8041 cgacaaatgc gcaaagcagg acaattaacg ccgcgagcag tgccatcatt gccggaccga
     8101 ataacgcttt ttccgggatg ttctggggaa tatttcgtgc agcgtaagtc atgattaacg
     8161 gtaccagcag cactttggtg ataaaggcgc tggcggacca gatcagcagt tgctctgcgg
     8221 cgaacaggca cgagagagtg gcgaaaatag acaccagcac cagcgactgg caggcgtaaa
     8281 atccgcatga caggcgatag cttttgacgc taatcacaaa cagcgatgtc agcatcatca
     8341 gtcccgccag attatttacg atcatagaac cgatcattca tcatctcctt actgcaacca
     8401 ggtcgcggcg attacgctgg aaatcagcga catcacaatc agtacaatca acaccaggcg
     8461 cattgaccct ggcagcggtg cggcatcggc gacggcctcg ctcggtttgc caggcacaac
     8521 gcgaccaaac cagcgaataa accaggcgaa actggcgacc gattcaatca tcagcagaat
     8581 catggcgggc agcaggatcc agtactccac tgacaacgca aaaccggcgg caaacagcgg
     8641 gaatttactg aagaagccgt tgaacggcgg cacaccggta atcgccagcg ctgccacgca
     8701 gaaacccacg cctggcaacg gcagggtgtg caatacgcca cgcagacgcg gcaacaagcg
     8761 cgtgccgcag ctgtaactca gcgcacctgc tacaaggaaa aacaggcttt tagcgaacgc
     8821 gtggttgacg atgtaggcga tgctgccctc cagtgccagc cgcccacttt caccatcgat
     8881 gcggcgtgga gataggcgct gatcggtgtt ggcgcttcca ttgcgtccgg tagccacgct
     8941 tgcatcggta gctgggccga tttcccccac gcggcaaaca ggatgccgcc ataaaccaga
     9001 taacgtgcgt cgccatgtaa ctcgctcatc gcgctaagca caaacgttcc ggtctgcaaa
     9061 aacagcgtgg cggcggcaag atacaacccc aacgaaccga tatgggtgat aagcaacgct
     9121 tttagtgttg aacgctgcgc tttatcgctc tggtaataac tgatcaacgc ccaggagcag
     9181 ccgccctaat ttcaaaaaac aacaactgac cgagcagcgt cgaggagagt accagtcccg
     9241 ccatcgcgcc gataaacacc agcaaaaatg cgtaataacg attcgtgccg ttatgcgggt
     9301 gttcgcgatt tttatccgtc agataacccg tggagtagag cgtgaccagc aaaccgagaa
     9361 acaccaccac aaacagaatc agcgtactca cgcgatcaat gaccaggcca aacaatgcca
     9421 catcccccac gttgaccaac gtcaacgtga cggcaacttt atcggcctga taaaacgcgg
     9481 agatcagcga caacatgcac agcgtggtca gtgcggcgaa caaaaccccc attcggcggc
     9541 ccgacgttgt ggcgaaaacg aaacgaccag tgcgccgata aaaggcagca ttaacgtcgt
     9601 cagagcaaga ttttccatat tccgtcagtg ctccttacag accggttaac cagaagaccc
     9661 atgcaagcgc agcaaggctg aagccaagcc aggtcacatg gtgaatgagt aaaaaacgcc
     9721 cgcgtgccag cgtgttttct gcgattgagg ccagtacaaa aatcagcaaa accttgagca
     9781 gcgtaacgac aagtgaagtc agcaggcagg cgagagaaag ttcttgcgcg cgcccaaagg
     9841 gcagaaacag ggccacaaac agtgctgcca tcacgacctg tttcagcccc agcccccatt
     9901 tcgctagcgc cagcccggca ccggaatatt cggtcagcgg gccttcctgt aattcctgtt
     9961 ctgcttcagc aacatcaaag ggaatttttc ccatctcaat gaagcaggca aaaccacagg
    10021 ccagtaatgc cagtacggtg gttagcggcg agttccagcc cgttgccagc gtattgctga
    10081 tcatctcgat atgcgtggaa cctgctatca gcgccaatac cagcagtgag agaatgagca
    10141 tgggttcgac cagaatgccg agcgtcaact cgcgactggc accgactccc gcaaacgggc
    10201 ttccggtatc cagcccggaa agagcaaaga aaaaacgaaa cagggcaaga agatagataa
    10261 gggtgatcag atcgccgccg cccgcaaaag gggaaacggt aataaaaagt ggtagggcca
    10321 tcgccagcac cagcatgctg ctgattaata cccacggcat caggcggaac atcagacctg
    10381 aagatatagg cgcaacttcc tggcgtttaa acagtttgtg gatctcgcga taatcctgcc
    10441 agatccccgg cccgcggcgg gagtgcatac gcgcgcgtat ctgctgggaa atacccgtaa
    10501 aaagcggggt tagcagcaga atcacggcct gtgctaacgc aaaaatgacc agatattcgt
    10561 cgcaaagagt ttgtctcatg gtgatttcct tagacggcaa tagcgattag cagcacaact
    10621 agtgcggcaa ctagatacag gcaatagaga cgaaagtcgc cgctttgcag atgctgtatt
    10681 tctttggcca gccgttgggt ggcgctcacg atggggcgga tcacccgctc atcccagaag
    10741 ggttctgtgc tctgagccct ggcggtgacg tgcgcaagat ctttatttag cctcagcgta
    10801 gggtcgagct gttgtcgtag acgaaataac gcagagaaga ccacacgcag cggctgcatc
    10861 acgccattgc ctgacggagc catcgcgttt tcccagccgt agccgcatgc ccaggcatct
    10921 cctgtgcgac gaaacgctgc gcggcgcgaa cgacaccaca gccagtaaag gcctggcagc
    10981 aaaggcatcg ccagtagtaa cagcaacagt aatgaaggag tgacccgtgt atgaaacgtg
    11041 ccgggtacaa gtgctattcc gctggcgaca gtgacgggag gggtattggt aaacgcatgg
    11101 gcaatatgca ttatcttcgg tgccagccaa ctggcactaa gcgcaattaa tacgcagagt
    11161 gccgcgagca gtagcatggc gacgatcatc gtatttggca cttcctgtgc ctcttcagcg
    11221 tgtgtactgc gcggcgcacc acagaaagta ataccgtaca ttttgacgaa gcacattact
    11281 gccagcccac cagtgactgc cagcattacc atagcaatag gacccgcaag ttgtagcgct
    11341 acggcttcca cacgacttag tgagaacagc gactgccagg tgtaccatat cgctgataaa
    11401 accattcagc ggaggaatgg ctgatatcgc gaggcaacca atcaggcatg ctgcggctgt
    11461 ccacggcatc cgtttcgcca gtgcccccat tttttccatg tcgtgggtat gcaaacgcga
    11521 aataatcgcg cccgcgccga gaaatagcag ccctttgaac agcgcatggt tgagcagatg
    11581 aaacagtgcg ccgagcagtc caaccacggt gagcagcggg tcgtgcagtg acagaccgtc
    11641 catcgccaca ccgactgcca gcaaaataat gccgacgttt tcgacggtac tccaggccag
    11701 cagccgtttg atatcctgtt ccgccagcgc atatagcacg cccaggagcg cggagattgc
    11761 gccgatcgcc atcaccagaa tgccccacca cagaggcaaa cccgtttgcg ccagcagatc
    11821 catcgctact ttcaggatgc cgaaaatacc gattttgacc attacgccag acatcaacgc
    11881 cgaagcgtgc gatggtgcgg cagggtgagc gcgcggcaac cagctgtgca acggcatcat
    11941 cccggctttc gcgccaaaac cgaaaaaggc cagcagaaac accgccgacg ccagccccgg
    12001 agaaagtgaa agcgtgcgaa actggcaaaa tcgaggctgc cgctttcgcg ccccatcagc
    12061 aagaaggcga tcataatcag caccgatccg gcgtgggcga taaaaaagta gagcatgcca
    12121 gcgttgatcg acgttttatc ctgcctggca atgaccagaa accaggaaga cagcgacatc
    12181 atttcaaaca gcacgatgaa ccaaaaagcg ttgtccatca ccagcagggc aaccatcgat
    12241 gcgatgaaaa gattcataaa gaagcccatc gccgccgcgc ctttgccctc gtattcgcgc
    12301 atataagtca atgaatagag cgaacaaacc accaccagca aggagataac cagcaccata
    12361 aatgccgaga ggctatccat tcgcagggtt aaatcggcaa agtcaaaagg ggtggcaaaa
    12421 cgggcgacta aagttacacc agcatgtaat tgcgtaattc cgctgatgat gccaatcacg
    12481 ccgcccacca gcgatgtgat gccggaaagc ttaatagcca gtctgtccag accgagtaaa
    12541 aacagcgaag ccagactggc aaacagaaag aggatcagcg accaggttaa taattgcagg
    12601 gcatccatta gtgttgctcc tgagtgaggg aaaggggatc ctccccgcca ttggcaaacc
    12661 agcttgcggc aaggcgctgt ttttctttca tctgacgttg caggctatcg tcggtaatca
    12721 gccgtaacgc ctgattcggg caagcgcgaa cgcaggccgg accttctggc aagaaattac
    12781 acaggtcgca tttcaccgcg acggtctgga cacccggttc ccagcgcagc aaagcatgtt
    12841 gggtcggcgc gttttcttcg ccatctttga gtgagccgtc agcctgaaaa acatattgcg
    12901 caggggcatt caccggacgg cttcctgaag cgctgattgc gccaaatggg cagaccacgg
    12961 cgcaaagctt gcagccaata cagaggcttt cgttgagttg gatcgcatca tccctctggg
    13021 agatggcatt gaccgggcag acctgcaggc aaggggcttc ctcacagtga tgacacacga
    13081 caggggcagt gattgttgac gtcttcgcca gggccaggcg cgggtgttgc tgtaaacctt
    13141 gcgttttatg cacgtccgaa caggtagcga gacaggtatt acatcctgta caccacagtg
    13201 gttcggccac cacaaagcgg ttcatgtcgg ctccttgaaa atgatatgaa acattgcatt
    13261 tcatattgca taaaggatgc cagtctgatt aatttaatat attcaataaa ttatgtatta
    13321 actgggttct gaacggtaca aaaatgatgg tcattaacgt tcagcaaaaa atggattcga
    13381 cacccgtgtc gcaggggaaa gcgagaatgt gatcttgatc acgagaagtg aggtgtgctg
    13441 accgcaagcg cagccagcac ggaatggagc aaagtaatca ggcgtgttct ttcagccagt
    13501 tcagcacaac gtcgtggtga ttgctggttt taaaatcgtc aaagacatgt tcgattttgc
    13561 catcagcgtc aatcaggaag ctgatgcgat gaataccatc gtaggttttg cccatgaagg
    13621 acttttcacc ccagacgccg aattgttcgc acacctggtg gtcctcatca gacaggagcg
    13681 taaagttaag cagctctttt tccgcaaaac gggagagttt ttcgggttta tcggtgctga
    13741 tacccagcac atcaacgccc gcttttttca actcatccat gttatcgcgt aagccgcagg
    13801 cctgtacggt acagccgggg gtcatggctt tcgggtagaa ataaaccaga acacgctgtc
    13861 cctggaagtc ggtcaaatta acttgttctc cgtcttgatc cggcaagcta aatttcggtg
    13921 cgatatcacc ggctttcagt ggattcatta cttaactcca tcctgttcat catgttggga
    13981 ataattgacg acgttaatac tgccttgtgc attgagttct gtacataggg ctttgaacgc
    14041 ttgctcaata tttgctgcgt ccgcagatgc ggggctgtgg gcggtgatct gaatatgcaa
    14101 ctgcgcagcc cgttcatttt cagcaggttg cgtgcgcgac accagctccg caatgttcat
    14161 atgatgcgcg tcgaaaagtg ctgtgaagcg ttcaattaaa tgcggggagt ctgcaacatc
    14221 gacctgaacc cagacagatg ctggcattgg cggacgcgga cgcgccgtcg tgcgcttcat
    14281 cacgattaaa agatccagtt cggcaccttt caacggtaac gttgattcaa tcagagtaat
    14341 ggcattccat gaaccggaaa gcagcatgat aaacgtgaac tcttctccca gcatagccag
    14401 gcgactgtct tcaatattac agccgcaact actgacatga cgggtgatgg tgttcacaat
    14461 tccagggcga tcggcaccca acgcagtgat caccagataa tgttgcgatg acagtgtcaa
    14521 actggttatt cctttaaggg gtgagttgtt cttaaggaaa gcataaaaaa aacatgcata
    14581 caacaatcag aacggttctg tctgcttgct tttaatgcca taccaaacgt accattgaga
    14641 cacttgtttg cacagaggat ggcccatgtt cacgggaagt attgtcgcga ttgttactcc
    14701 gatggatgaa aaaggtaatg tctgtcgggc tagcttgaaa aaactgattg attatcatgt
    14761 cgccagcggt acttcggcga tcgtttctgt tggcaccact ggcgagtccg ctaccttaaa
    14821 tcatgacgaa catgctgatg tggtgatgat gacgctggag ctggctgacg ggcgcattcc
    14881 ggtgattgcc gggaccggtg ctaacgctac tgcggaagcc attagcctga cgcagcgctt
    14941 caatgacagc ggtatcgtcg gctgcctgac ggtaacccct tactacaatc gtccgtcgca
    15001 agaaggtttg tatcagcatt tcaaagccat cgctgaacat actgacctgc cgcaaattct
    15061 gtataatgtg ccgtcccgta ctggctgcga tctgctcccg gaaacggtgg gccgtctggc
    15121 gaaagtaaaa aatattatcg gaatcaaaga ggcaacaggg aacttaacgc gtgtaaacca
    15181 gatcaaagag ctggtttcag atgattttgt tctgctgagc ggcgatgatg cgagcgcgct
    15241 ggacttcatg caattaggcg gtcatggggt tatttccgtt acggctaacg tcgcagcgcg
    15301 tgatatggcc cagatgtgca aactggcagc agaagggcat tttgccgagg cacgcgttat
    15361 taatcagcgt ctgatgccat tacacaacaa actatttgtc gaacccaatc caatcccggt
    15421 gaaatgggca tgtaaggaac tgggtcttgt ggcgaccgat acgctgcgcc tgccaatgac
    15481 accaatcacc gacagtggtc gtgagacggt cagagcggcg cttaagcatg ccggtttgct
    15541 gtaaagttta gggagatttg atggcttact ctgttcaaaa gtcgcgcctg gcaaaggttg
    15601 cgggtgtttc gcttatttta ttactcgctg cctgtagttc tgactcacgc tataagcgtc
    15661 aggtcagtgg tgatgaagcc tacctggaag cggcaccgct tgcggagctt catgccccgg
    15721 ctggaatgat tttgccggtg acctccggtg attatgcaat cccggtgacc aacggtagtg
    15781 gtgctgtcgg taaggcgctg gacattcgtc caccagccca gccgctggca ctggtttctg
    15841 gcgtgcgtac ccagttcacg ggcgataccg cttcattgct ggtggaaaat ggtcgtggca
    15901 atactctgtg gccgcaggtg gtttgcgtgc tgcaggcgaa aaactacacc atcacccaac
    15961 gtgatgatgc tggtcagaca ctgaccatcg attgggtaca atggaaccgt ctggacgaag
    16021 acgagcagta tcgtggtcgt tatcaaatct ctgttaagcc gcagggttat cagcaggcgg
    16081 ttacggttaa actgctgaac ctggaacagg cgggcaaacc ggttgcagac gcggcttcca
    16141 tgcagcgtta cagcacggag atgatgaacg ttatttccgc cggtctggat aaatctgcct
    16201 ctgacgccgc gaacgctgcg caaaatcgtg cctccaccac tatggacgta caaagtgcag
    16261 ctgatgacac cggtttaccg atgctggtcg tacgcgggcc gttcaatgtg gtttggcaac
    16321 gtctgccagc ggcgctggaa aaagtgggca tgaaagtgac cgacagcacc cgttcgcagg
    16381 gtaacatggc cgtaacttat aagccgctgt ctgacagcga ctggcaggaa ctgggcgcga
    16441 gcgatccagg cctggcatcc ggtgactata aactgcaggt tggcgattta gataaccgca
    16501 gcagcctaca gttcatcgat ccgaaaggtc atactctgac tcagagtcag aacgacgcgc
    16561 tggtagctgt cttccaggct gcgtttagca agtaaaaata cagggctgga gtcatccggc
    16621 ccttttttct gatatgatac gcaaacgtgt gcgtcggcag aaaaatgcaa ttttagcggt
    16681 aattcgcacg aaatttgttt gtcggacgta ggtcggataa ggcgttcttg ccgcatccga
    16741 caaaacatcc ggcacaccag acagcaaaag attttaaaac gttaattcac acccaggagt
    16801 gataaagatg caaaagcaag ctgagttgta tcgtggtaaa gcgaaaaccg tatacagcac
    16861 ggaaaacccg gacctgttgg tgctcgaatt ccgcaatgat acgtcagcag gggatggcgc
    16921 gcgcattgag cagtttgatc gcaaaggtat ggtgaacaac aagttcaact acttcattat
    16981 gagcaaactg gctgaagcgg gtatcccgac tcaaatggag cgtctgctct ccgataccga
    17041 atgtctggtg aaaaagctgg atatggtgcc ggttgagtgt gtcgtgcgta accgtgctgc
    17101 aggctctctg gtgaaacgtc ttggaatcga agaaggtatt gagctgaacc cgccgctgtt
    17161 cgatctgttc ctgaaaaacg atgccatgca cgatccgatg gtcaacgaat cttactgcga
    17221 aacctttggc tgggtgagca aagagaacct ggcgcgtatg aaagagctga cctacaaagc
    17281 gaacgacgtg ctgaaaaaac tgttcgatga tgctggtctg attctggtcg acttcaagct
    17341 ggagtttggt ctgtacaaag gtgaagtggt actgggcgat gagttctccc cggacggcag
    17401 ccgcctgtgg gacaaagaaa cactggagaa aatggacaaa gaccgtttcc gccagagcct
    17461 cggtggcctg atcgaagcct atgaagccgt cgcccgccgc ctgggtgtac agctggactg
    17521 atttttctgt tcatcatctt gccgtgcagc tggcacggca agacaaccgc tctcggaata
    17581 tatgcattga acgctcattc ctccgccatt tcatcccgct ttcctgtggt aattttcctc
    17641 tgaaccacct acgatcattt ctataatgaa tatattgttg aggtatctat gcgttggcaa
    17701 gggcgacgtg aaagtgacaa tgttgaagac aggcgcaaca gctccggtgg tccgtctatg
    17761 ggcggtcccg gttttcgcct gccaagcggt aaaggcgggc tgattttact gatagtcgtg
    17821 ctggttgcag gctactatgg tgttgattta accgggttaa tgactggaca gccggtttcc
    17881 caacaacaat caacgcggtc cattagccct aatgaagacg aagctgcaaa attcacctcg
    17941 gtgattctgg caaccacgga agacacctgg ggacaacagt tcgagaagat gggtaagacc
    18001 tatcagcaac cgaagctggt catgtaccgt ggaatgacgc gcaccggctg cggggcgggc
    18061 cagtccatta tggggccgtt ctattgcccg gcggatggca cagtttatat cgatctctcc
    18121 ttctatgatg acatgaaaga caaacttggc gcggatggcg attttgccca ggggtacgtt
    18181 atcgcccatg aagtcggtca tcatgtgcag aaactgttag gcatcgagcc gaaagttcgt
    18241 caactgcaac aaaacgcgac gcaggcggaa gtgaaccgct tatctgtgcg tatggaactc
    18301 caggccgact gttttgccgg tgtctggggg cataacatgc agcagcaagg tgttctggaa
    18361 accggcgatc tggaagaggc gctgaatgcg gcgcaggcca tcggcgatga ccgtttacaa
    18421 cagcaaagtc aggggcgagt agtaccagac agtttcacac atggcacttc tcagcaacgc
    18481 tacagctggt ttaaacgtgg tttcgacagc ggcgatccgg cacaatgcaa tacttttggt
    18541 aaaagcattt aatttccggg gcagggatgg ctgaactgac tgcgctttac acattaacag
    18601 cgcaaatgaa acgtgaaggg atccgccgct tgctggtgtt gagcggggaa gagggttggt
    18661 gttttgatca tgcgcttaag ttgcgtgatg ccttacttgg cgactggctg tggatttcgc
    18721 cgcagccaga tgctgaaaac cactgttctc cctcggtgct acaaacttta cttgggcgcg
    18781 agttccggca tgcggtattc gacgcccgcc acggctttga tgccgctgcc tttgcggcac
    18841 ttagcggaac gttgaaagcg ggaagctggc tggttttgtt actccctgta tgggaagagt
    18901 gggaaaacca acctgatgcc gactcgctgc gctggagtga ttgccctgac cctattgcga
    18961 cgccgcattt tgtccagcat ctcaaacgcg tacttacggc ggataacgac gctattctct
    19021 ggcggcaaaa ccagccgttc tcgttggcgc attttactcc ccgtactgac tggcaccccg
    19081 cgaccggcgc accacaacca gaacaacagc aactcttaca gcagctactg accatgctgc
    19141 cgggcgtggc agcggtaacg gctgcgcgtg ggcgcggtaa gtcggcgctg gcagggcaac
    19201 tcatttctcg tattgcgggc agtgcgattg tcaccgcgcc cgcaaaagcg gcaacggatg
    19261 tactggcaca atttgcgggc gagaagtttc gctttattgc gccggatgcc ttgttagcca
    19321 gcgatgagca agccgactgg ctggtggtcg atgaagccgc agccatacct gcgccgttgt
    19381 tgcatcaact ggtatcgcgt tttcctcgaa cgttgttaac cactacggtg cagggctacg
    19441 aaggcaccgg acgtggtttt ttgctgaaat tttgcgctcg ctttccgcat ttacaccgtt
    19501 ttgaactgca acagccgatc cgctgggcac agggatgccc gctggaaaaa atggttagtg
    19561 aggcactggt ttttgacgat gaaaacttca cccatacacc acaaggcaat atcgtcattt
    19621 ccgcatttga acaaacgtta tggcgaagcg agccagaaac gccgttaaag gtttatcagt
    19681 tattgtctgg tgcgcactac cggacttcgc cgctggattt acgccggatg atggatgcac
    19741 cagggcaata ttttttacag gcggctggcg aaaacgagat tgccggagcg ctgtggctgg
    19801 tggatgaggg gggattatct caacaactca gtcaggcggt atgggcaggt tttcgtcgcc
    19861 cgcggggtaa tctggtggcc cagtcgctgg cggcgcacgg tagcaatcca ctggcagcga
    19921 cattgcgtgg acggcgggtc agccggatag cagttcatcc ggctcgtcag cgcgaaggcg
    19981 ttgggcaaca gctcattgcc agcgctttgc aatatacgca agacctcgac tatctttcgg
    20041 tgagttttgg ttacaccggg gagttatggc gtttctggca acgctgcggt tttgtgctgg
    20101 tacgaatggg taatcatcgt gaagccagca gtggttgcta tacggcgatg gcgctgttac
    20161 cgatgagtga tgcgggtaaa cagctggctg aacgtgagca ttaccgttta cgtcgcgatg
    20221 cgcaagctct cgcgcagtgg aatggcgaaa cacttcctgt tgatccacta aacgatatcg
    20281 tgctttctga cgacgactgg cttgaactgg ccggttttgc ttttgctcat cgtccgctat
    20341 taacgtcgtt aggttgctta ttgcgtctgc tacaaaccag tgaactggca ttaccggcgc
    20401 tgcgtgggcg tttacagaaa aatgccagtg atgcgcagtt atgtaccaca cttaaacttg
    20461 caggccgcaa gatgttactg gtccgtcagc gggaagaggc cgcgcatgcg ctgttcgcac
    20521 ttaatgatgt tcgcactgag cgtctgcgcg atcgcataac gcaatggcaa ttttttcact
    20581 gactccttca attttctccc atggtcattg tgagccagcg gcgtaaaatt aatgacatca
    20641 gttaaggagt tcgccatgaa acatgaccat tttgttgttc aaagcccgga taaacctgtg
    20701 caacagttgt tactgctttt ccatggtgtc ggggataact cggtggcaat gggggaaata
    20761 ggcagttggt ttgcaccgct gtttcctgat gcgctggtgg tgagtgtcgg tggcgcggag
    20821 ccgagcggta atccggcggg gcgtcagtgg ttttcggtgc agggtattac ggaagataat
    20881 cgccaggcgc gtgtggatgc catcatgccg acgtttattg aaacggtacg ctactggcag
    20941 aaacagagtg gagtaggggc taacgccacg gcgttaatcg gtttctctca aggcgcgatt
    21001 atggcgctgg agagtattaa agccgaaccg ggccttgctt cacgcgtcat tgcttttaac
    21061 ggacgctatg cgagcctgcc ggaaaccgcg tctacagcaa cgacaattca cctgattcat
    21121 ggcggtgaag atccggttat cgatctggcg catgcggttg cggcgcagga agcgttaatc
    21181 agtgccggtg gtgacgtgac gctggatatc gtggaggatt taggccatgc gatcgacaat
    21241 cgcagtatgc aatttgccct ggatcacttg cgttatacca ttccgaaaca ttatttcgac
    21301 gaagcgctaa gtggcggtaa gcctggcgat gatgatgtga ttgaaatgat gtaaaagaca
    21361 gattacctgg cctgataaga cgcgtgagcg tcgcatcagg catcgttcac cattgccgga
    21421 tgcggcgtta acgccttatc cggcctacgg ttgagcactc agcttacttc ttcggttgat
    21481 cctttttcgg ccagtcgtcg tcatcgtccc acttatcgtt gaaatcacga tgcgggggaa
    21541 gctccggctt gttggcgaga aatttcttgt ggtcgacgcg cttgagatct ttaatcacgt
    21601 tcagcaggac gcctaccaaa aagacaatca ccagaatcca ccaatattta gccagccagt
    21661 ccatgcttat ttcctcttgc agaaccactc atcaggcgac gagctgttcc atgatacgtt
    21721 gatacatacg ggcaagtagc tgcaggtcgg cagtgttcac acattcatta attttatgaa
    21781 tagtggcatt gaccggcccg agttccacca cctgcgcccc catgcgagca ataaagcgcc
    21841 cgtcggacgt tccgcctgtg gtcagtagct gcggtttaat ttcattatag tgctcaaccg
    21901 cgttaacgac cgcatccacc agtttaccgc gcgcggtcaa aaatggctgc ccggaaagcc
    21961 accaatccac cgtatagcgc agttgatgtt tttcaagcag ggcaagcacc tgcgctttga
    22021 tcatctcatc agtcagttcg gtgctgaagc ggaagttaaa ctgcacaaac agttcacccg
    22081 gaataacatt gttactgccc gttcccgcct gaatattagc aatctgcata ctggtcgccg
    22141 ggaaaaattc attgccctga tcccactcaa tagccactaa ttcattaagg aaaggtgctg
    22201 cgcgatgtac tggattgtca gccagatgcg ggtaggccac atgcccctga acgccatgaa
    22261 tggtaaggtt gcaggttaac gatccgcgac gaccattttt caccacatca ccaaccactt
    22321 cgatactcga cggttcgccg accaggcagt aatcgagacg ctcattacgt gccatcaacg
    22381 cttcgacgac ttttaccgta ccgttgtggg cactggcttc ttcatcagag gtgatcagaa
    22441 atgccagtcg ccccgtatgg ttgggatgtt gtgcgacaaa gcgttctgcc gctaccacca
    22501 tcgccgccag cgagcctttc atatctgccg caccgcgccc gaataacatg ccatcacgaa
    22561 tggtgggttc aaacggcgga ttgatccaac gatcggcgtc gccaggcggc accacgtcgg
    22621 tatgcccggc aaaggctaac gtttcacctt gcccacgcca tgcccaaaaa ttctgcgtat
    22681 cggcaaagtc catgcgttca acggtaaaac cgatcgcctg caaacgttca atcaacaaag
    22741 cctggcatcc tgcgtcatca ggactcaggg aagggcggcg aataagctgt tgtgtcagct
    22801 caataaccgg gcacgacata gactacacct catggaaaaa ttgctgataa ctggaatcac
    22861 tgaaacccag cagcataggc ttaccaggcg cgcagagcaa tggacgtttg ataattgaag
    22921 gcatttcagt cattaatgcc gccgcagagg ccgcatcggt gattttattg cgggtggttt
    22981 cgtccagttt acgccaggtt gtaccacggg tgttcagtaa cgcttcccag cctaattcgt
    23041 tgataaaacc gttcaataat tcgctgtcca gcccatcgac gcggtaatca tgaaaacgat
    23101 agtcgatgtt attggcttcc agccaacggc gagccttttt aatggtgtca caatttttga
    23161 tgccgtaaag tgtaaccata atgaatcctt tttcgatcta tgagaataaa tactcattta
    23221 agggtgaaaa cattttgcct gcaaatgatt atcaggaaat ataacattat cga
//
LOCUS       DADMHC010000047        23140 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.047, whole genome shotgun sequence.
ACCESSION   DADMHC010000047 DADMHC010000000
VERSION     DADMHC010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 23140)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23140)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23140
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.047"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..463)
                     /gene="yddG"
                     /locus_tag="JNZ57_001548"
     CDS             complement(<1..463)
                     /gene="yddG"
                     /locus_tag="JNZ57_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid efflux DMT transporter YddG"
                     /protein_id="HAY8827814.1"
                     /translation="MTRQKATLIGLIAIVLWSTMVGLIRGVSEGLGPVGGAAAIYSLS
                     GLLLIFTVGFPRIRQIPKGYLLAGSLLFVSYEICLALSLGYAATRHQAIEVGMVNYLW
                     PSLTILFAILFNGQKTNWLIVPGLLLALVGVCWVLGGENGLHYDEIINNITT"
     gene            695..3742
                     /gene="fdnG"
                     /locus_tag="JNZ57_001549"
     CDS             695..3742
                     /gene="fdnG"
                     /locus_tag="JNZ57_001549"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:1280..1282,aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HAY8827815.1"
                     /translation="MDVSRRQFFKICAGGMAGTTVAALGFAPKQALAQARNYKLLRAK
                     EIRNTCTYCSVGCGLLMYSLGDGAKNAREAIYHIEGDPDHPVSRGALCPKGAGLLDYV
                     NSENRLRYPEYRAPGSDKWQRISWEEAFSRIAKLMKADRDANFIEKNEQGVTVNRWLS
                     TGMLCASGASNETGMLTQKFARSLGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWV
                     DIKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIAVDPRFTRTASVADIYAPIR
                     SGTDITFLSGVLRYLIENNKINAEYVKHYTNASLLVRDDFAFEDGLFSGYDAEKRQYD
                     KSSWNYQFDENGYAKRDETLTHPRCVWNLLKAHVSRYTPDVVENICGTPKADFLKVCE
                     VLASTSAPDRTTTFLYALGWTQHTVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSN
                     IQGLTDLGLLSTSLPGYLTLPSEKQVDLQSYLEANTPKATLAGQVNYWSNYPKFFVSL
                     MKSFYGDAAQKENNWGYDWLPKWDQTYDVIKYFNMMDEGKVTGYFCQGFNPVASFPDK
                     NKVVSCLSKLKYMVVIDPLVTETSTFWQNHGESNDVDPASIQTEVFRLPSTCFAEEDG
                     SIANSGRWLQWHWKGQDAPGEARNDGEILAGIYHHLRELYQAEGGKGVEPLMKMSWNY
                     KQPHEPQSDEVAKENNGYALEDLYDANGVLIAKKGQLLSSFAHLRDDGTTASSCWIYT
                     GSWTEQGNQMANRDNSDPSGLGNTLGWAWAWPLNRRVLYNRASADINGKPWDPKRMLI
                     QWNGSKWTGNDIPDFGNAAPGTPTGPFIMQPEGMGRLFAINKMAEGPFPEHYEPIETP
                     LGTNPLHPNVVSNPVVRLYEQDALRMGKKEQFPYVGTTYRLTEHFHTWTKHALLNAIA
                     QPEQFVEISETLAAAKGINNGDRVTVSSKRGFIRAVAVVTRRLKPLNVNGQQVETVGI
                     PIHWGFEGVARKGYIANTLTPNVGDANSQTPEYKAFLVNIEKA"
     gene            3755..4639
                     /gene="fdxH"
                     /locus_tag="JNZ57_001550"
     CDS             3755..4639
                     /gene="fdxH"
                     /locus_tag="JNZ57_001550"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit beta"
                     /protein_id="HAY8827816.1"
                     /translation="MAMETQDIIKRSATNSITPPSQVRDYKAEVAKLIDVSTCIGCKA
                     CQVACSEWNDIRDEVGHCVGVYDNPADLSAKSWTVMRFSETEQNGKLEWLIRKDGCMH
                     CEDPGCLKACPSAGAIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKC
                     TLCVDRVSVGQEPACVKTCPTGAIHFGTKKEMLELAEQRVAKLKARGYEHAGVYNPDG
                     VGGTHVMYVLHHADQPELYHGLPKDPKIDTSVSLWKGALKPLAAAGFIATFAGLIFHY
                     IGIGPNKEVDDDEEDHHE"
     gene            4632..5285
                     /gene="fdnI"
                     /locus_tag="JNZ57_001551"
     CDS             4632..5285
                     /gene="fdnI"
                     /locus_tag="JNZ57_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit gamma"
                     /protein_id="HAY8827817.1"
                     /translation="MSKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLT
                     QTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKDIPWLLNIVEVLKGNEHK
                     VADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGI
                     ILIHAILIHMYMAFWVKGSIKGMIEGKVSRRWAKKHHPRWYREIEKAEAKKESEEGI"
     gene            complement(5336..5620)
                     /locus_tag="JNZ57_001552"
     CDS             complement(5336..5620)
                     /locus_tag="JNZ57_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HAY8827818.1"
                     /translation="MKMANHPRPGDIIQESLDELNVSLREFARAMEIAPSTASRLLTG
                     KAALTPEMAIKLSVVIGSSPQMWLNLQNAWSLAEAEKTVDVSRLRRLVTQ"
     gene            complement(5766..6768)
                     /gene="adhP"
                     /locus_tag="JNZ57_001553"
                     /pseudo
     CDS             complement(5766..6768)
                     /gene="adhP"
                     /locus_tag="JNZ57_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415995.4"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
     gene            complement(6902..8599)
                     /locus_tag="JNZ57_001554"
     CDS             complement(6902..8599)
                     /locus_tag="JNZ57_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HAY8827819.1"
                     /translation="MEPKTKKQRSLYIPYAGPVLLEFPLLNKGSAFSMEERRNFNLLG
                     LLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPV
                     IYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILG
                     LGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRI
                     IDDEYYEFVDEFIQAVKQRWPDVLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAA
                     VTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMIIAQTQREGLSEEAARQKVFM
                     VDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQ
                     TGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVV
                     WKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLV
                     LPELKDIQKVSRAIAFAVGKMAQQQGVAVKTSAEALQQAIDDNFWQAEYRDYRRTSI"
     gene            complement(8756..8893)
                     /gene="sra"
                     /locus_tag="JNZ57_001555"
     CDS             complement(8756..8893)
                     /gene="sra"
                     /locus_tag="JNZ57_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stationary-phase-induced ribosome-associated
                     protein"
                     /protein_id="HAY8827820.1"
                     /translation="MKSNRQARHILGLDHKISNQRKIVTEGDKSSVVNNPTGRKRPAE
                     K"
     gene            complement(8995..9210)
                     /gene="bdm"
                     /locus_tag="JNZ57_001556"
     CDS             complement(8995..9210)
                     /gene="bdm"
                     /locus_tag="JNZ57_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310112.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm-dependent modulation protein"
                     /protein_id="HAY8827821.1"
                     /translation="MFTYYQAENSTAEPALVNAIEQGLRAEHGVVTEDDILMELTKWV
                     EASDNDILSDIYQQTINYVVSGQHPTL"
     gene            9556..9987
                     /gene="osmC"
                     /locus_tag="JNZ57_001557"
     CDS             9556..9987
                     /gene="osmC"
                     /locus_tag="JNZ57_001557"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin OsmC"
                     /protein_id="HAY8827822.1"
                     /translation="MTIHKKGQAHWEGDIKRGKGTVSTESGVLNQQPYGFNTRFEGEK
                     GTNPEELIGAAHAACFSMALSFMLGEAGFTPTSIDTIADVSLDKVDAGFAITKIALKS
                     EVAVPGIDASTFDGIIQKAKAGCPVSQVLKAEITLDYQLKS"
     gene            complement(10043..10969)
                     /locus_tag="JNZ57_001558"
     CDS             complement(10043..10969)
                     /locus_tag="JNZ57_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HAY8827823.1"
                     /translation="MSDTLLTLRGVHINFPARKNWLGKTTEHVHAINGIDLQIRRGET
                     LGIVGESGCGKSTLAQLLMGMLQPSHGQYIRSGSQRIMQMVFQDPLSSLNPRLPVWRI
                     ITEPLWIAKHSSEQQRRALAEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQ
                     PDVIVLDEPTSALDISVQAQILNLLVTLQENHGLTYVLISHNVSVIRHMSDRVAVMYL
                     GQIVELGDAQQVLTAPAHPYTRLLLDSLPAIDKPLEEEWALRKTDLPGNRTLPQGCFF
                     YERCPLATSGCEVRQSLAIREDGRELRCWRAL"
     gene            complement(10962..11948)
                     /locus_tag="JNZ57_001559"
     CDS             complement(10962..11948)
                     /locus_tag="JNZ57_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY8827824.1"
                     /translation="MTQPVLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGES
                     GSGKSVTAMLIMRLLPTGSYCVHRGQISLLGDDVLNAREKQLRQWRGARVAMIFQEPM
                     TALNPTRRIGLQMMDVIRHHQPISRREARAKAIVLLEEMQIPDAVEVMSRYPFELSGG
                     MRQRVMIALAFSCEPQLIIADEPTTALDVTVQLQVLRLLKHKARASGTAVLFISHDMA
                     VVSQLCDSVYVMYAGSVIESGVRADVIHHPRHPYTIGLLQCAPEHGVPRQLLPAIPGT
                     VPNLTHLPDGCAFRDRCYAAGAQCENVPALTACGDNNQRCACWYPQQEVISV"
     gene            complement(11945..12829)
                     /locus_tag="JNZ57_001560"
     CDS             complement(11945..12829)
                     /locus_tag="JNZ57_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D,D-dipeptide ABC transporter permease"
                     /protein_id="HAY8827825.1"
                     /translation="MMLSEETSAVRPQKQTRFNGAKLVWMLKGSPLTVTGAVIIVLML
                     LMMFFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRVLVGSQQSILAGLV
                     VVAIAGMIGSLLGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAMLAIA
                     IVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLISWHILRNSLPPLIVQASLDI
                     GSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPGAAILLTAVGFNL
                     FGDGIRDLLDPKAGGKQS"
     gene            complement(12826..13309)
                     /locus_tag="JNZ57_001561"
                     /pseudo
     CDS             complement(12826..13309)
                     /locus_tag="JNZ57_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416003.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            complement(13311..14861)
                     /locus_tag="JNZ57_001562"
     CDS             complement(13311..14861)
                     /locus_tag="JNZ57_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HAY8827826.1"
                     /translation="MKRSIPFRPTLLALVLATTFPVAHAAVPKDMLVIGKAADPQTLA
                     PAVTIDNNDWTVTYPSYQRLVQYKTDGDKGSTDVEGDLASSWKASDDQKEWTFTLKDN
                     AKFADGTPVTAEAVKLSFERLLKIGQGPAEAFPKDLKIDAPDEHTVKFTLSQPFAPFL
                     YTLANDGASIINPAVLKEHAADDARGFLAQNTAGSGPFMLKSWQKGQQLVLVPNPHYP
                     GNKPNFKRVSVKIIGESASRRLQLSRGDIDIADALPVDQLNALKQENKVNVAEYPSLR
                     VTYLYLNNSKAPLNQADLRRAISWSTDYQGMVNGILSGNGKQMRGPIPEGMWGYDATA
                     MQYNHDETKAKAEWDKVTSKPTSLTFLYSDKDPNWEPIALATQSSLNKLDINVKLEKL
                     ANATMRDRVGKGDYDIAIGNWSPDFADPYMFMNYWFESDKKGLPGNRSFYENSEVDKL
                     LRNALATTDQTQRTRDYQQAQKIVIDDAAYVYLFQKNYQLAMNKEVKGFVFNPMLEQV
                     FNINTMSK"
     gene            complement(14875..15456)
                     /gene="ddpX"
                     /locus_tag="JNZ57_001563"
     CDS             complement(14875..15456)
                     /gene="ddpX"
                     /locus_tag="JNZ57_001563"
                     /EC_number="3.4.13.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine dipeptidase"
                     /protein_id="HAY8827827.1"
                     /translation="MLDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHK
                     DAITALAKSISIAQLSGLQLVIYDAYRPQQAQAMLWQACPDPQYVVDVTVGSNHSRGT
                     AIDLTLRDEHGNILNMGAGFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTRGGFVGIS
                     SEWWHFELPQAASYPLLADQFTCFISPGTQHVS"
     gene            complement(15714..18113)
                     /gene="dosP"
                     /locus_tag="JNZ57_001564"
                     /gene_synonym="pdeO"
     CDS             complement(15714..18113)
                     /gene="dosP"
                     /locus_tag="JNZ57_001564"
                     /gene_synonym="pdeO"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-sensing cyclic-di-GMP phosphodiesterase"
                     /protein_id="HAY8827828.1"
                     /translation="MKLTDAENAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKL
                     WGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIW
                     TRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQ
                     CNRAFTEMFGYCISEACGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRT
                     GEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE
                     IICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEVQNAQSWSATIRQRDGAPAGIL
                     QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN
                     YLDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFRGKLKPDQYLCRI
                     EGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDVGKNRDYL
                     LSTAHNAIDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIF
                     AETGELYGIEALARWHDPQHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS
                     QNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFK
                     RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI
                     TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLK
                     I"
     gene            complement(18138..19519)
                     /gene="dosC"
                     /locus_tag="JNZ57_001565"
                     /pseudo
     CDS             complement(18138..19519)
                     /gene="dosC"
                     /locus_tag="JNZ57_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310122.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DosC"
     gene            complement(19891..21210)
                     /locus_tag="JNZ57_001566"
     CDS             complement(19891..21210)
                     /locus_tag="JNZ57_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 10 glycosylhydrolase"
                     /protein_id="HAY8827829.1"
                     /translation="MDICSRNKKLTIRRPAILVALALLLCSCKSTPPESMVTPPAGSK
                     PPATTQQSSQPMRGIWLATVSRLDWPPVSSVNISNPTSRARVQQQAMIDKLDHLQRLG
                     INTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWF
                     NPYRVSVNTKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITS
                     IVAEVVSRYPVDGVQFDDYFYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIT
                     KVSHTIKSIKPGVEFGVSPAGVWRNRSHDPLGSDTRGAAAYDESYADTRRWVEQGLLD
                     YIAPQIYWPFSRSAARYDVLAKWWADVVKPTRTRLYIGIAFYKVGEPSKIEPDWMING
                     GVPELKKQLDLNDAVPEISGTILFREDYLNKPQTQQAVSYLQSRWGS"
     gene            complement(21341..22876)
                     /gene="gadC"
                     /locus_tag="JNZ57_001567"
     CDS             complement(21341..22876)
                     /gene="gadC"
                     /locus_tag="JNZ57_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance gamma-aminobutyrate antiporter
                     GadC"
                     /protein_id="HAY8827830.1"
                     /translation="MATSVQTGKAKQLTLLGFFAITASMVMAVYEYPTFATSGFSLVF
                     FLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQIAIG
                     FIPMLYFVLGALSYILKWPALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGF
                     FAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVE
                     ASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFT
                     VLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNK
                     NGVPVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVL
                     VLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLV
                     VSFLVVLALPFILYAVHDRKGKANTGVTLEPINSQNAPKGHFFLHPRARSPHYIVMND
                     KKH"
BASE COUNT         5706 a         5855 c         5858 g         5721 t
ORIGIN      
        1 tggtggtgat attattgatg atttcatcat aatgtaaccc attctcaccg cctaacaccc
       61 agcagacgcc gaccagggct aataataatc ctggtacaat cagccagttg gttttctgac
      121 cattaaacag aatggcaaag agaattgtca ggctgggcca cagatagttc accataccca
      181 cttcaatcgc ctgatgacgg gtcgccgcat accctaagga aagcgccaga cagatttcat
      241 agctgacgaa taacagactc ccggcgagta aatagccttt cggaatctgc cgaatacgcg
      301 gaaatccaac cgtgaagatt aacagcagcc cgcttaatga atagatagca gctgcgccgc
      361 cgaccgggcc gagcccctcg ctgacaccgc gaatcaatcc taccatcgtg ctccacagga
      421 cgatcgctat tagccctatg agcgttgctt tttgtcgtgt catgctcgct gttttgtctc
      481 tcttgccgtt aaaaattaag ctgaatttta tagcattttt ttaactggcc tgtcaggcag
      541 tggtgcgttt ttctaccgct attgaggtag gtcaatttgc gcaggcggat tattttgtgg
      601 caaacacgtg ttctttttga tttcgcgcaa aaagattcag aattttactg ttagtttcct
      661 cgcgcagtaa tacccctgaa aaaagaggaa agcaatggac gtcagtcgca gacaattttt
      721 taaaatctgc gcgggcggta tggctggaac aacggtagcg gcattgggct ttgcccctaa
      781 acaagcactg gctcaggcgc gaaactacaa attattacgc gctaaagaga tccgtaacac
      841 ctgcacatac tgttccgtag gttgcgggct attgatgtat agcctgggtg atggcgcgaa
      901 aaacgccaga gaagcgattt atcacattga aggtgacccg gatcatccgg taagccgtgg
      961 tgcgctgtgc ccaaaagggg ccggtttgct ggattacgtc aacagcgaaa accgtctgcg
     1021 ctacccggaa tatcgtgcgc caggttctga caaatggcag cgcattagct gggaagaagc
     1081 attctcccgt attgcaaagc tgatgaaagc tgaccgtgac gctaacttta ttgaaaagaa
     1141 cgagcagggc gtaacggtaa accgttggct ttctaccggt atgctgtgtg cctccggtgc
     1201 cagcaacgaa accgggatgc tgacacagaa atttgcccgc tccctcggga tgctggcggt
     1261 agacaaccaa gcgcgcgtct gacacggacc aacggtagca agtcttgctc caacatttgg
     1321 tcgcggtgcg atgaccaacc actgggtgga tatcaaaaac gctaacgtcg taatggtaat
     1381 gggcggtaac gctgctgaag cgcatcccgt cggtttccgc tgggcgatgg aagcgaaaaa
     1441 caacaacgat gcaaccttga tcgctgtcga tcctcgtttt acgcgtaccg cttctgtggc
     1501 ggatatttac gcacctattc gttccggtac ggacattacg ttcctgtctg gcgttttgcg
     1561 ctacctgatc gaaaacaaca aaatcaacgc cgaatacgtt aaacattaca ccaacgccag
     1621 cctgctggtg cgtgatgatt ttgctttcga agacggcctg ttcagcggct acgacgctga
     1681 aaaacgccag tatgataagt cgtcctggaa ctatcagttc gatgaaaacg gctatgcaaa
     1741 acgcgatgaa acactgactc atccgcgctg tgtgtggaac ctgctgaaag cgcacgtttc
     1801 ccgctacacg ccggacgtcg ttgaaaacat ctgcggtacg ccaaaagccg acttcctgaa
     1861 agtgtgtgaa gtgctggcct ccaccagcgc accggatcgc acaaccacct tcctgtacgc
     1921 gctgggctgg acgcagcaca ccgtgggtgc gcagaacatc cgtactatgg cgatgatcca
     1981 gttgctgctc ggtaacatgg gtatggccgg tggcggcgtg aacgcattgc gtggtcactc
     2041 caacattcag gggctgactg acttaggtct gctctctacc agcctgccag gttatctgac
     2101 gcttccgtca gaaaaacagg ttgatttgca gtcgtatctg gaagcgaaca cgccgaaagc
     2161 gacgctggct ggtcaggtga actactggag caactatccg aagttcttcg ttagcctgat
     2221 gaaatctttc tatggcgatg ccgcgcagaa agagaacaac tggggctatg actggctgcc
     2281 gaagtgggac cagacctacg acgtcatcaa gtatttcaac atgatggacg aaggcaaagt
     2341 caccggttat ttctgccagg gctttaaccc ggttgcgtcc ttcccggaca aaaacaaagt
     2401 ggtgagctgc ctgagcaagc tgaagtacat ggtggttatc gatccgctgg tgactgaaac
     2461 ctctaccttc tggcagaacc acggcgagtc gaacgatgtc gatccggcgt ctattcagac
     2521 tgaagtattc cgtctgcctt cgacctgctt tgccgaagaa gatggttcta tcgctaactc
     2581 cggtcgctgg ttgcagtggc actggaaagg tcaggacgcg ccgggcgaag cgcgtaacga
     2641 cggcgaaatt ctggcgggta tctaccatca tctgcgcgag ctgtaccagg ccgaaggtgg
     2701 taaaggcgta gaaccgctga tgaagatgag ctggaactac aagcagccgc acgaaccgca
     2761 atctgacgaa gtggctaaag agaacaacgg ctacgcgctg gaagatctct atgacgctaa
     2821 tggcgtgctt attgcgaaga aaggtcagtt gctgagtagc tttgcgcatc tgcgtgatga
     2881 cggtacaacc gcatcttctt gctggatcta caccggtagc tggacagagc agggcaacca
     2941 gatggctaac cgcgataact ccgacccgtc cggtctgggg aatacgctgg gatgggcctg
     3001 ggcgtggccg ctcaaccgtc gcgtgctgta caaccgtgct tcggcggata tcaacggtaa
     3061 accgtgggat ccgaaacgga tgctgatcca gtggaacggc agcaagtgga cgggtaacga
     3121 tattcctgac ttcggcaatg ccgcaccggg tacgccaacc gggccgttta tcatgcagcc
     3181 ggaagggatg ggacgcctgt ttgccatcaa caaaatggcg gaaggtccgt tcccggaaca
     3241 ctacgagccg attgaaacgc cgctgggcac taacccgctg catccgaacg tggtgtctaa
     3301 cccggttgtt cgtctgtatg aacaagacgc gctgcggatg ggtaaaaaag agcagttccc
     3361 gtatgtgggt acgacctatc gtctgaccga gcacttccac acctggacca agcacgcatt
     3421 gctcaacgca attgctcagc cggaacagtt tgtggaaatc agcgaaacgc tggcggcggc
     3481 gaaaggcatt aataatggcg atcgtgtcac tgtctccagc aagcgtggct ttatccgcgc
     3541 ggtggctgtg gtaacgcgtc gtctgaaacc gctgaatgta aatggtcagc aggttgaaac
     3601 ggtgggtatt ccaatccact ggggctttga gggtgtcgcg cgtaaaggtt atatcgctaa
     3661 cactctgacg ccgaatgtcg gtgatgcaaa ctcgcaaacg ccggaatata aagcgttctt
     3721 agtcaacatc gagaaggcgt aagggggcga acagatggct atggaaacgc aggacattat
     3781 caaaaggtcc gcaactaact ccatcacgcc gccttctcag gtgcgtgatt acaaagcaga
     3841 agtcgcaaaa cttatcgacg tttccacctg tatcggctgt aaagcctgtc aggtggcgtg
     3901 ttcggagtgg aacgacatcc gtgatgaagt ggggcactgc gtcggggttt acgataaccc
     3961 cgccgatctg agcgccaagt cctggacggt gatgcgcttt agcgaaaccg aacagaacgg
     4021 caagctggag tggctgatcc gtaaagacgg ctgtatgcac tgtgaagatc ccggctgcct
     4081 gaaggcgtgc ccgtctgctg gtgcaatcat tcagtacgct aacgggattg tcgatttcca
     4141 gtcggaaaac tgcatcggct gtggttactg cattgccggg tgtccgttta atattccgcg
     4201 cctcaacaaa gaggataacc gggtatataa atgcacgctc tgcgtcgatc gcgtcagcgt
     4261 cggccaggaa ccggcttgtg tgaaaacctg tccgaccggg gctatccact tcggcaccaa
     4321 gaaggagatg ctggagctgg cggaacagcg cgtggcgaaa ctgaaagcgc gtggttacga
     4381 acatgctggc gtctacaacc cggatggggt cggtggtacg cacgttatgt acgtgctgca
     4441 tcacgccgat cagccggagc tgtatcacgg tctgccgaaa gatccgaaga tcgacacctc
     4501 ggtaagcctg tggaaaggcg cgttgaaacc gctggcagcg gctggcttta ttgccacttt
     4561 tgccgggttg attttccact acatcggtat tggcccgaat aaggaagtgg acgatgacga
     4621 ggaggatcat catgagtaag tcgaaaatga ttgtgcgcac caaatttatt gatcgcgcct
     4681 gtcactggac cgtggtgatt tgcttcttcc tggtggcgct gtccgggatt tcgttcttct
     4741 tcccgacgct gcaatggctg acgcaaacct tcggtacgcc gcagatggga cgcattttgc
     4801 acccgttctt cggcattgcg attttcgtcg cgctgatgtt tatgtttgtg cgttttgtgc
     4861 atcacaacat cccggataag aaagatattc cgtggctatt gaacattgtc gaagtattaa
     4921 aaggcaatga gcacaaagtg gcggatgttg gtaagtacaa cgccgggcaa aagatgatgt
     4981 tctggtcgat catgagcatg attttcgtgc tgttggtgac cggggtgatt atctggcgtc
     5041 cgtactttgc gcagtacttc ccgatgcagg ttgttcgcta cagcctgctg atccacgcgg
     5101 ctgccggtat catcctgatc cacgccatcc tgatccatat gtatatggca ttctgggtga
     5161 aaggatcgat taaagggatg atcgaaggga aggtaagccg tcgctgggcg aagaaacacc
     5221 atccgcgctg gtatcgtgaa atcgagaagg cagaagcgaa aaaagagagt gaagaaggga
     5281 tataatctct tttgaacttt aagctgaaaa tggcgcttta agaagcgcca tttttttatt
     5341 gcgtaaccag acggcgcagt cgcgacacat ccaccgtttt ttcagcctct gccagactcc
     5401 aggcgttttg cagattcagc cacatttgcg gcgaactgcc gatcaccacg gaaagtttaa
     5461 ttgccatttc tggcgtcaaa gctgcttttc cggtcagcaa tcggcttgcc gttgagggcg
     5521 caatttccat tgctctggca aactcgcgca ggctgacatt aagttcgtcc agtgattcct
     5581 gaataatgtc ccccgggcgg ggatgattgg ccattttcat tagtgtcttt actctcagta
     5641 gcgttccttc tctgggaaca ctatcattat tgttccttcc tacgcaacaa taatccattt
     5701 agccatttca tgttggagag tgtgcgatgc tgcgacccga acatgggagt cgcagcaaag
     5761 acctcttagt gacggaaatc aatcaccata cggccacgga ttttgccttc ttccatctcg
     5821 gtaaagatgg tgttgatgtc cgctaacgga cgcagggcga ctttcggcac aactttgcct
     5881 tcggcggcaa actggaaggc ttcggttaga tcctggcgcg tgccgaccag cgaaccgacc
     5941 acttcaatgc catccagcac aagacgtggg atatccaggc tcatagactc cggcggcaga
     6001 ccgacagcca caacacgacc gcctgcacgg acagcatcaa ctgccgagtt aaacgcagct
     6061 ttagctactg ctgttaccac cgcagcgtga gcgccaccgg ttttctcctg cacaatttag
     6121 gcggcgtctt cggtgcgtga gttaatcgct aaatctgcac ccatttcggt tgccagtttt
     6181 aactgctcat cattgacatc aatggcgatc actttggcgt taaagacatt cttcgcgtat
     6241 tgcagggcga ggttacccag accgccaaga ccgtagatag caatccactg accgggacga
     6301 atttttgaca gtttaacggc tttgtaggtg gtgacccccg cacaggtaat gctgttggcc
     6361 gccgccgagt ccagaccatc tggcactttt accgcgtaat cggcgaccac gatgcactct
     6421 tccgccatca acgctgtatc cggcattttt aactgaacgg cagagcgttt cgttaccact
     6481 gttacagtat tcgcaatgac cgcatccttc gtaaaaccac gccacgctgg cacgatcgcc
     6541 tagttttaat gaggtgacac ctgggccaac ttctgccacc acaccgatgc cttcatggcc
     6601 cagaattacc ccagttttgt caccaaaata gccattctta acatgaagat cggtatgaca
     6661 tacaccacaa cactccattt tcagcagggc ttcgccatgt ttcagtgagc gcagtgtttt
     6721 atccgtaacg tcaacatgat gatccttcgt aacaactgca gccttcatag ttcctccttt
     6781 tcggatgatg ttctgcatag caggtgaggc aaatgagatt tattcgccac tacccagtat
     6841 ggatgagatc tgaaaaaggg agagggaaat agcccggtag ccttcactac cgggcgcagg
     6901 cttagatgga ggtacggcgg tagtcgcggt attcggcttg ccagaaatta tcgtcaatgg
     6961 cttgttgcaa agcttcagca gacgttttca ccgccacgcc ttgctgctgc gccattttgc
     7021 caaccgcaaa cgcaattgcg cgggagactt tctgaatatc tttcagttcc ggtagtacca
     7081 gaccttcgcc gttcagcacc agcggcgaat actgagcaag cgtttcactt gctgacatca
     7141 gcatctcatc ggtgatacgt gacgcgccgg aagcaataac acccagcccg atgccaggga
     7201 aaataaaggc gttgttacac tgggcgatag ggtagatttt atctttccat accactggat
     7261 taaacgggct gccagtggcg accagcgcgt taccttcggt ccaggcgata atgtcctgcg
     7321 gtgtggcttc cacgcgtgac gtcgggttag acagcggcat cacgatcgga cgcggacagt
     7381 gtttatgcat ctcacggatg atctcttccg taaacagccc ggtctgtcct gagacgccaa
     7441 tcagaatatc tggttttaca ttgcgcacca catccagcag tgacagcaca tcgctgtcgg
     7501 tatcccagtc actgaggttt tcgcgtttct gcaccagttt ggtctggaaa ggcagcaggt
     7561 tcggcatctt gtccgtcagc aggccaaagc gatcgaccat aaagactttc tgccgcgccg
     7621 cttcctcgct taatccttcg cgctgggtct gggcgatgat catttcggca atgccgcatc
     7681 ccgctgaacc tgcaccaagg aagacgattt ttttctcgct taactgacca cctgccgctc
     7741 ggcttgctgc gatcagtgtg ccgactgtta ccgccgcagt gccctgaatg tcatcgttaa
     7801 aagaacaaat ttcattgcga tagcggttaa gtaacggcat cgcatttttt tgagcaaagt
     7861 cttcaaactg caacagcacg tctggccagc gttgtttcac agcttggata aattcatcaa
     7921 cgaattcata gtattcgtcg tcaatgatac gcggattacg ccagcccata tacagcggat
     7981 cgttaagcag ctgttggttg ttcgttccga catccagcac caccggaagg gtatacgccg
     8041 ggctgatgcc gccacaggcg gtatagagcg acagtttacc gatcggaatg cccatcccgc
     8101 cgatgccctg gtcaccaagc cccagaatac gttcaccgtc agtcaccaca atcactttga
     8161 tattatggtt cggtacgttt tgcagaatat cgtccatatt gtggcggttc tggtaagaaa
     8221 taaacacgcc gcgtgaacgg cggtagatct cagaaaaacg ctcacaggct gcgccgacgg
     8281 ttggggtata aataacaggc atcatctcat caagatgatt gtttaccaga cggtagaaga
     8341 gggtttcgtt ggtgtcctgg atgttacgca ggtagatgtg tttgtcgatt tcggttttga
     8401 atccctgata ctggatccat gctcgttccg cttgttcttc gatggtttcg accacttccg
     8461 gcagtaaccc cagcaggttg aagttacggc gttcttccat gctgaaggca ctgcctttat
     8521 tcaacaacgg aaattccagc agtacagggc cagcgtaagg gatataaagc gaacgctgtt
     8581 tttttgtttt tggttccatg tcactcactc ttttttgaat atccatccct ggcacgcttt
     8641 tatcgtcttt gctttaccgc cagggcgtcg gccccaagta taaagcagat aaaaacaaaa
     8701 acaccattgc gcaggcaatg gtgtttaatc gtcattgagg actgatggtt atgaattact
     8761 tttcagcggg gcgttttctg ccggttgggt tatttaccac gctggatttg tcaccttcgg
     8821 taactatttt gcgctggtta gaaattttat ggtccagtcc aagaatatga cgtgcctgac
     8881 ggttcgattt cattttaact cctcaatcct gttgctagtt ttaaggacaa catcgccgta
     8941 gcgaagaaac acgtgctaaa cccctaaatt aggttgccga tcaagcatag caccttaaag
     9001 cgtagggtgc tggccactga ccacataatt gatcgtttgc tggtagatat cactgaggat
     9061 gtcgttatca gaagcttcca cccatttggt cagctccatg agaatgtcat cttcagtgac
     9121 aacaccgtgc tctgcccgaa ggccttgctc aatggcatta accagagcgg gttctgctgt
     9181 tgaattttct gcctgataat aagtaaacat agtgattctc cgtgtctgtg tatttatggt
     9241 gtctgctacg gatcgcagat ttataaagca cattcagcat ggcaaatatt tgccgcttcg
     9301 ttgttaagat tagtcctggt tgatgatttt tatattttaa cctcatgata ttgataggta
     9361 ttattattgt ggtgagttga ttaatattaa tgcaatatct cttgggttat atattcccgg
     9421 ttatctattg tggaaattta atttaagtgc agaagtaata tttctgccgg atttttattc
     9481 ggaatatcct gcttatcctc gtgctgtttc tcacgtagtc tataatttcc tttttaagcc
     9541 cacatgagag caacaatgac aatccataag aaaggtcagg cacactggga aggcgatatc
     9601 aaacgcggga agggaacagt atccaccgag agtggcgtgc tgaaccaaca gccgtatgga
     9661 tttaacacgc gttttgaagg cgaaaaagga actaaccctg aagaactgat tggcgcagcg
     9721 catgccgcat gtttctcaat ggcgctttca ttcatgctgg gggaagcggg atttacgcca
     9781 acatcgattg ataccatcgc cgatgtgtcg ctggataaag tggatgccgg ttttgcgatt
     9841 acgaaaatcg cactgaagag tgaagttgcg gtgccgggta ttgatgcctc tacctttgac
     9901 ggcatcatcc agaaagcaaa agcaggatgc ccggtctctc aggtactgaa agcggaaatt
     9961 acgctggatt accagttgaa atcgtaaagc attgccggat gacgtgtcag gcgcgtgaat
    10021 gcctgatgcg ttgttagcat ctctacagcg cccgccagca ccggagctca cgtccgtcct
    10081 cccttattgc taatgattgc cggacttcac atccgctggt tgcaaggggg caacgttcgt
    10141 agaaaaaaca gccttgcggc aacgtgcggt ttcccggcag atccgtttta cgtaatgccc
    10201 attcttcctc cagcggttta tcaatggcgg ggagggaatc cagcaataat cgggtgtatg
    10261 gatgtgccgg agccgttagc acctgttgcg cgtcgcccag ttctacaatc tgcccgagat
    10321 acatcaccgc cacccgatcg ctcatatgac gtatcaccga gacattgtgt gaaatcagca
    10381 cataggtcag cccgtgattt tcctgtagcg ttaccagtaa attgaggatc tgcgcctgca
    10441 cggagatatc cagcgcagag gttggctcat caagcacaat cacgtcaggc tgcgaagaga
    10501 gtgctctggc aatggcgata cgttgccgct gcccgccgga gaacgcatga ggcaggcggt
    10561 cgagatactc cggacgaata cccacctgca cagccagctc ctctgccaac gctcgccgct
    10621 gttgttcact actatgctta gctatccaga gcggttctgt gatgatgcgc cacaccggta
    10681 agcgcggatt gagcgaagag agcgggtcct gaaacaccat ctgcataatg cgttgtgagc
    10741 cagaacggat gtactgcccg tggctcggtt gcagcatacc cattaaaagc tgtgcgaggg
    10801 tgcttttgcc gcagcctgac tcgccgacga tccctaaggt ttcaccacgg cggatctgta
    10861 aatcaatacc attaatcgca tgaacatgtt ccgtagtttt accaagccag tttttacggg
    10921 ccgggaaatt gatatggacg ccgcgtaacg ttaataacgt gtcagacact tatgacctcc
    10981 tgctgcggat accaacaggc gcagcgctgg ttgttgtcac cacacgctgt cagcgccggg
    11041 acgttttcac actgtgcacc tgccgcatag caacgatcgc gaaaagcgca gccgtcaggc
    11101 aaatgggtga ggtttggtac cgtccctgga atggcgggta atagctggcg tggtactcca
    11161 tgttctggtg cacattggag caaaccaatg gtatacggat gccggggatg atggataacg
    11221 tctgccctca cgccgctttc aattacgctt ccggcataca tcacgtaaac gctatcgcac
    11281 agttgcgaca ccacggccat atcatggctg atgaacagaa ccgcagttcc actggcgcgg
    11341 gctttatgtt taagcaaacg cagtacctgc aactgcaccg tgacgtccag cgccgtagtc
    11401 ggttcgtcgg caataatcaa ttgcggctcg caggagaatg ccagcgcaat cattacccgc
    11461 tggcgcatac cacctgaaag ctcaaacgga tagcgcgaca taacttccac ggcatccggg
    11521 atttgcatct cttccagcag gacaatcgct ttagctctgg cttcccgacg acttattggt
    11581 tgatgatggc ggatcacgtc catcatctga agacctattc gacgtgtcgg attgagggcg
    11641 gtcatcggtt cctgaaagat catcgccact cgtgcgccgc gccactgacg aagctgtttt
    11701 tcccgagcgt taagaacatc gtctcccagc agtgaaatct gcccccgatg tacgcaataa
    11761 ctgcccgtcg gtagcagacg cataatcagc attgcggtga ctgatttacc tgagccggat
    11821 tctcccacca gaccgacaat ttcaccgcgg ttaatctgca aggacacatt gttgagcgcg
    11881 tgaacatcac cgttaaaacc ggggaaactc aaatgcagct gttgaatgtc cagaacgggc
    11941 tgggtcatga ctgctttcct cctgctttcg ggtcaagcag atcgcgaata ccatcaccaa
    12001 agagattaaa cccaacggcg gtaagcaaaa tcgctgcccc cggaaatgcg caataccacc
    12061 actgatcgag tacatagttg cgaccattcg ctaccatcgc gccccattca gcactcggtt
    12121 gttgagcacc caggccaata aatcccaacg tggcggccat taaaatcgcg ctaccgatat
    12181 ccagcgatgc ctgcacgatc agcggcggca gggagttacg taaaatatgc cagctgatca
    12241 gatgccaacg cgacgcacca aaggttttcg ccgcctgaac ataggtatac tggcgtacaa
    12301 ctaatgcttg cccccgcgcc aggcgcacat aaaagggaat tcgcacaata gcaatcgcca
    12361 gcatggcgtt aaataaactc ggcccgagag cggcagccag tgccattgtc agtaccaacg
    12421 aaggaatcga cagcataatg tccatgatgc gcatgatgat ggcgtctgcg cgtccgccaa
    12481 gcacaccgag tagcgaacca atcatacccg caatggcaac cacgactaat ccggcgagaa
    12541 ttgattgctg actgccgacc agtacgcggc tgaacagatc gcgtcccact tcatcggtgc
    12601 caaaccagtg cgccgcagaa ggcggcaaaa ggcgggcggt taaatcaatg gcgttgggat
    12661 catgcgtcgc aagccacggt gaaaaaaaca tcatcaatag cattaataca atgatgactg
    12721 cgccggtcac ggtgagcgga ctgcctttca gcatccatac cagttttgca ccgttaaatc
    12781 gcgtttgttt ttgtgggcgt acggcggacg tttcctcgct tagcatcatt caccacctcc
    12841 acgtccgata cgcggatcaa tccacaaata gagcaaatcc accaccaggt tgaccagcac
    12901 ataagcaaat gaaaccacga cggcaaagcc catcactgcc gggaagtcga gcgcctgtat
    12961 tgatgttact acccatgcac ccattccggg ccaggcaaaa acggtttcgg tgagcactgc
    13021 gccatacaac aaatcgccca gcgccagacc caatacggta atcgatggga tcaacgcatt
    13081 gggtagcgca taacataaaa cgatatacca gccgggcaag ccgctggccc gggcggtacg
    13141 aatgtagtct tcactcaatt gttccagcat cgctggcgcg gtcacccgcc agtaaccgcg
    13201 ccggatcgcc agggatcaga tgcgagataa taaacgtaat cacgcagacg cccgccacca
    13261 cgagcaccag cccccagcag cgttggcgta aaatactcca gaaggtcacg ttatttactc
    13321 atggtattga tattgaagac ctgttccagc atgggattga acacaaagcc tttcacctct
    13381 ttgttcatcg ccagttggta gtttttctgg aacaggtaca cataagcagc gtcatcaatg
    13441 acgattttct gtgcctgctg gtagtcccgg gtacgctgcg tctggtcggt ggtcgcaagc
    13501 gcattgcgca gtaacttatc gacctcactg ttttcataga acgagcggtt acccggcaga
    13561 ccttttttgt ctgactcaaa ccagtaattc ataaacatat acgggtcggc aaaatctgga
    13621 ctccagttgc caatcgcaat gtcgtaatca cctttaccca ctctgtcgcg catggtggcg
    13681 ttcgccagtt tttccagctt cacattgatg tccagcttgt tgagactgga ttgtgtcgcc
    13741 agagcaatag gctcccagtt cggatcctta tcggagtaga gaaacgtcag gctggtgggt
    13801 ttgctcgtca ctttatccca ttcggctttg gctttcgttt cgtcatggtt gtattgcatt
    13861 gccgtcgcat cgtagcccca catgccttcc ggaatcgggc cgcgcatctg ttttccgtta
    13921 ccactcagaa tgccgttaac catgccctga taatcggtag accaggaaat ggcccgacgc
    13981 agatccgcct gattaagagg cgctttgctg ttattcagat acaggtaggt gacgcgcagt
    14041 gacggatact ctgccacatt gactttgttt tcctgcttca gggcgttgag ttgatccacc
    14101 ggcagcgcat cggcaatgtc aatatcacca cgggagagct gcaggcgacg ggaggcactt
    14161 tcaccaataa tttttaccga tactcgctta aagttcggtt tattgccagg gtaatgcgga
    14221 tttggcacca gaactaattg ctgacctttt tgccagcttt tcagcataaa tggtccggaa
    14281 ccggcggtat tttgcgcgag gaagccgcgg gcatcatccg ctgcatgttc ctttaacacc
    14341 gccggattga taatggatgc accgtcattc gccagcgtgt agaggaacgg tgcgaatggc
    14401 tggctaaggg taaacttcac cgtatgttcg tcgggagcat caatctttaa atctttggga
    14461 aatgcttctg ctggcccctg gccgattttt agtagccgct caaaagagag ttttactgct
    14521 tcggcagtga ccggtgtgcc atcggcaaat ttagcattgt ccttcagggt gaacgtccac
    14581 tctttttgat cgtcagacgc tttccagcta cttgccagat cgccttcaac gtcggttgag
    14641 cctttatcac cgtccgtttt gtactgaacc agccgctgat aagacgggta ggtcaccgtc
    14701 cagtcgttat tatctattgt taccgccggg gcgagggttt gtggatcggc ggccttacca
    14761 atcaccagca tatctttcgg tacggcggcg tgcgcaaccg ggaaagttgt ggcaaggacg
    14821 agcgcgagca atgtaggacg aaacggtatc gatctcttca tgacagtttc ctgattaact
    14881 gacgtgctgt gtgccagggg atataaaaca ggtgaattga tcagcgagca gtgggtaact
    14941 cgctgcctgg ggtaattcga agtgccacca ttcgctggag ataccgacaa aaccgccacg
    15001 agtcataatc gcattcagca acagccgatt gcgctgagcg gcgggcggga cggaagggtg
    15061 ataggcatgg gagcgctcgt gcatttcatc gaaccctgcg cccatattga ggatgttccc
    15121 gtgctcatca cgaagcgtca ggtcgatcgc cgtgccacgg ctgtgattag aaccgaccgt
    15181 cacatcaaca acatattgcg ggtctgggca ggcttgccac aacatcgcct gtgcttgttg
    15241 tgggcgatac gcatcgtaaa tcaccagttg taagcctgac agctgggcga tactgatact
    15301 tttcgccagc gcggtaatcg catccttgtg tagcagacaa cgcgcttgct gataaatagc
    15361 tttacctgtg atgttatcag cgcaggcgta tttcaattcg atctccagat cagggaagat
    15421 tacggctaaa tcaaccagtt cggtggtatc caacataaac ggttcctgta taagacaaaa
    15481 attgctgcgc tttccgctta tgcagatctc attccatgcc gggataagcg ccagaatgct
    15541 ggcttaaagt tatatttttt aacttttgat caacatttgt gcagcgtagt gcagttttgg
    15601 tgcaagaggg gaagttaagg aaggaatctc ccggaatcgt agctgaaatc acagtattta
    15661 agtgacggtg tcacgttaaa tgaaaacccg cgagtgcggg cgagaggaat ttgtcagatt
    15721 ttcagcggta acacgctgct catccagcct ggaatttctt cggcgggtag ggggcgggaa
    15781 aagaaatatc cctgaataac gcgacagtgg atcttgcgta gcatctcaaa ttgctctttg
    15841 gtttcgacgc cttccgccac gacggttaaa ttgaggcttt gcccaatgct ggtaatggct
    15901 tcaagtaagg caaggatgcg tttttcggtc agacaacgat cgacaaaact tttgtcaatt
    15961 ttgatttccg ttaccggaag actgactaag cgggataatc cggaaaagcc cgtaccaaaa
    16021 tcatctaccg ataagcccac gcccatatca cgcaggatct gaatgcgctt aaagatttcg
    16081 gtatcgtgtt ccatcatcat gctttccgtg atttctaccg tcagctggtg gccgtcaata
    16141 ccccaggcgt gcattgcatc agacacctga ttaggcagtt gattactgcg aaagtgcagt
    16201 gcggacaagt taacggaaag cgccgggata tgaatattct ggctacgcca ttctgctaac
    16261 tgacggcaag cttccgcgat gacccagcgc ccaatatttt cgatttcacc aatctcttct
    16321 gcgagaggaa taaaccgtga agggggcaca tgaccatgct ggggatcgtg ccagcgcgca
    16381 agggcttcga tgccgtacag ttcacccgtt tctgcgaaga tttgcggctg gtaaacaagt
    16441 ttcagttggt tattgctaat cgcttctttc agcgctgcgc ctaaaaccaa acgctctttt
    16501 accatttcgt tcatcgccgg gctgaagaac tgccagccgt taccgccatt cttgcgaata
    16561 taatctattg cattgtgagc agtggagagt aggtaatcgc ggtttttacc cacgtcgtag
    16621 ctgatgccaa tactcaaggt aagcgggaat ggtttatcgt caatcattat cggcttgctg
    16681 accacattcc gtagctcatc ggcgatctgg gtaatgttac tgacgtcgtt ttccaggctc
    16741 acgaggacaa actgcgtacc ttcgatacga cagagatact gatccggttt gagttttcca
    16801 cgaaagcgat tgaccacttc cagcaatgcc tgatcggccc acgcatagcc aaggctatca
    16861 atcacatcct gaatatggtc aacaccgatg agatacacca ccggagagac ggctttgtcg
    16921 accaggtcat cgaggtaatt gtgcaggtta ttgcgatttg gcagaccggt catcggatca
    16981 aattggatga gttgttcaat atgctggcgg cttttttcct gttccagcgc cagcgcggcc
    17041 atatgctgac tgatatctgc cacgcgttcg ataaaggcgc tggtttctgc tcctgacgag
    17101 gttttaattt gcaggatccc cgcaggcgcg ccatcacgct gacgaatggt cgctgaccag
    17161 ctttgcgcat tttgaacttc tgcaccgtgc gaagatgacg cccagtgtat cggcatcccg
    17221 ttgcgcagtg cgaacagcga aacatgcgat tcgttgagaa cagattcgat gttacgacaa
    17281 atgatttccc ccatttcatg aaatggcggg ctgctgcaca tggcggcgag aatattgcct
    17341 tcaagctggc ggatttgccg ttcttcggtg atatccgaga aagtcattac caggttctgc
    17401 agatgcgcga gcacgtcata aaccgggctg atagaggctt taatccagat tttttcaccg
    17461 gtgcgcgtca acagcagaaa ttcgtcctga tcgcgggcgg ttttccatag caactgttgt
    17521 aaacgaatgc ggttatcggc agggaattca ggaatgttca ggagtgtatc gggctgcata
    17581 ccgcaggctt cgctaatgca gtaaccaaac atttcggtaa atgcgcgatt gcactgcaca
    17641 atatggcgtt ccggatcgag gacaatcacc ggtcggtcga gatggtcaac ggcaataatc
    17701 aattgtcggg tctgttcttt ttgcgccatt tctacgctgg catcccgtac cagcgccagg
    17761 taataaactt tcccctcggc gctcactttc gatagcgcaa aacgggtcca gattttactg
    17821 ccgtcttttt tctccagctg cagctcccga ctcatcccct cgacgcgcgc tttaccacct
    17881 tcacggttat gacgaatgta ttcaggatgc gcaggacgca aatcccgcgg aatcagcata
    17941 tcaatgttat tgccaatgac ttcttcacgt ttgtaccccc agagcttctc tgcggcgggg
    18001 ttgaaaaaca tcacttcatc attttcgtta attaacaccg cgcccatcat attttgttca
    18061 agggcgggga aaaaaatgcc atcggcggca ttttccgcat cggttagctt catgattacc
    18121 tctgcatcct ggcgcatcta aagactggct ttccagagtt caacacggtt tctacctcgt
    18181 cttttggcga tatacagagc ttcatcggct atttgaatga ggcgctcata gtcaggatga
    18241 ccattaaaca tggcggcacc gatggaaagt gagagggcaa tatcctcgcc gtttgcggct
    18301 ttcagtttgg ttttctccgc ccgactgcga atacgttctg cggtacgtaa cgtttcgttt
    18361 tcagaagctt cagtcaaaac aatgataaat tcatcgcccc cgtagcgaaa aacataatca
    18421 ctactgcgga cgttgtcata aaaggcctga gagactttac gcagaatttc atcgccagtg
    18481 ttatggcccc acgtatcgtt gatctctttg aatttatcaa cgtcaataat cagcactgac
    18541 agcggtgtac cggtcaggtt ggcatgggca atttcgcgtt tgaagatagt cggcaggaag
    18601 cggcggttaa gtaatttcgt cagtacatcc ataccgactt cgtggcgcga tacttcttca
    18661 aacaattcac gcagcaaggt aataatttgc gatacagtat ttcttatctg taataaaaat
    18721 ttcacccgca gacttctgtt attcaaattc ctggtgttac gcatggtttg attgaatata
    18781 ccgtcgaaat cctgaatcag acgggagata tgcctacttc ggcaatgcca ctaaaataat
    18841 gtcgaccttt atggttaaac cacaggccaa aatcagcctg gcttaaaggc aaactactgc
    18901 ctaaatcaga atccagcagg attttataga taatatctat ttcccatgaa agtattgagg
    18961 ctatttgccg ttctttttct tcttcggcgt tttctagtaa cgagaagata cgatagtttt
    19021 catcttcctt tgaggcacta ctgtcactaa aggtaaacgc gcgggtcatc acttccatag
    19081 cgatatcaat actgttaatc gagaaatggt agacctgaag tttttctgcg gcagaataat
    19141 ccgaagagaa gattaccgga tagaggattt ttttcagcac ccgaaacccc atctcgacaa
    19201 tttctaccgg aattcctatg cgggcatgca cttccgcgac ggtatgctgg atttgtatta
    19261 gcctttcgac atcgtcaacc tgggcagaaa gcacgttaat aatccagcgt tccatcgcac
    19321 ttttcaactg ccgctcaact tgttcattac tcaagaattc ttcggcatgc gggtcgatgc
    19381 ggacaattcg ataaaactcg atactcagat aatgagcatg cgcaacggca atttccgcgg
    19441 ctttagcacg aatgagtgga tctgcctgtt cgacaagtcc ggtccactca tctttcattc
    19501 ttttaaaata catctccata attcacaccc ttataaggct gggaaatcag acggaatcaa
    19561 aacgcaacgt gcgagatcga ctaactgcac catattctcc tgaaatatga agatatactg
    19621 aaaagaaata agcgacttag gacagtttca atctacgcta ctgttcttca gaagagtata
    19681 gcccatcgta attatttttc ggtgacagcg aatatcgtat ggtttttcat attcatacat
    19741 ttttattagg gatttatagc tgtttaacta agtgtggtta attgcgtggt taatttgact
    19801 tatgtaagca tgattactag tgggatattt cacaaggtgt aacaagccgg tgggtaaagc
    19861 accggcttgt tacaaagtaa gcatgggagt ttaactgccc caacgacttt gcagatagct
    19921 gaccgcttgt tgagtctgcg gtttattcag atagtcctca cggaacaaga tggtgccgct
    19981 aatttctggt accgcatcgt taagatcgag ctgctttttc agttccggta cgccgccgtt
    20041 aatcatccag tctggctcta tctttgaagg ttcacccact ttatagaagg cgataccgat
    20101 atacaggcgg gtcctggtcg gtttaacgac atccgcccac cattttgcca acacgtcata
    20161 acgcgcggca ctccgtgaga acggccagta aatttgggga gcaatgtaat ccagcaatcc
    20221 ttgttccacc catcgacggg tgtcagcgta ggattcgtca taggctgccg cgcctcgggt
    20281 atcggaaccg agcggatcgt gtgatcggtt acgccacacg cctgccgggc taacgccaaa
    20341 ttcgactccc ggcttaatgc ttttaatggt gtgcgatact tttgtaatta actgctgagt
    20401 attgttgcgc cgccagtctg cttttgacgc aaatgcgcct ccgtatttac ggtacgtttc
    20461 gttatcattt agccgtgaac ccggtgactc cgtatagaaa tagtcgtcaa actgcacgcc
    20521 atctaccgga tagcgggaaa ccacttcggc gactattgat gtgatccagt cctgaacctc
    20581 agggatgccc gggtcgagga caaagcgatc gccagacgtt ctgatccagt cacggtgttg
    20641 cacatagacg ctcgccggtt gttgagacag agtgctattc agttccctga tagtaccggg
    20701 cttcgtatta accgatacgc gataggggtt aaaccaggcg tgtactttca tcccacgctt
    20761 gtgggcttcg tcgagcataa attgcagcgg atcgtaaccc ggattttcac caatcttacc
    20821 ggtcataaga tcggaccacg gcaaaatttt cgatggccac agggcggtac cgtccggctt
    20881 gacctggaaa aagaccgtgt ttataccgag acgttgcaga tgatccagtt tgtcgatcat
    20941 cgcctgttgt tgtacacggg cccggctggt ggggttacta atgttaaccg aggaaaccgg
    21001 tggccagtcg aggcgagaca ccgtggccag ccagatgcca cgcatcggtt gtgacgattg
    21061 ttgcgtcgtg gctggtggct ttgaacctgc tggtggtgtc accatggact ctggaggcgt
    21121 gcttttacaa ctacacagta aaagtgccag tgcaaccagt atcgctggtc ttctaatcgt
    21181 taatttcttg tttcgggagc agatatccat atgtgctggt ttccggtaaa cagatgtgcg
    21241 ctcattctcg tacttatccc ggttaagtca atacgacagc aagcacgaaa aagggagcga
    21301 tgaattatcg ctcccttgtc ttataaccat tcagacatgg ttagtgtttc ttgtcattca
    21361 tcacaatata gtgtggtgaa cgtgcacgcg ggtgcaggaa gaagtgacct tttggtgcgt
    21421 tctgactgtt gattggctcc agagtgacgc cggtattcgc tttgccttta cgatcatgaa
    21481 cagcatagag aataaagggc agggcaagta ccaccaggaa actaacgacc agtaattcaa
    21541 catacatatc ggtagagtca ccctggatgt tatccggcgg caggaaggaa acaataaacg
    21601 ccataattga agtcagcaga ccgacaattg ccacgaccag tttcacccct ttaccaccag
    21661 ggatattaaa tgtgcgtttt aagtcaggat gtttaagaac caacacaatg tagccaataa
    21721 acagcatgaa ataagcacac agataaatca ccaccgtcag cgccagtgcg atcaggaagg
    21781 acatgttgtt accgccaccg gtattggtga ggatgatcaa cgcgatagaa gtaatcacca
    21841 gctgcgaaat gaccagcgtt accggtacgc catttttgtt cattttagcg aatgccgctg
    21901 gcagcaggtt tttctgcgct gtgacataca tcccgcgaga aggaccaaca atccaggagg
    21961 cgatttccgc cagaacaccc agcaacagca gtgcggagat cacgcgaacc gtccactcaa
    22021 tttccggtgc cacatgggac atcagaacgg taaaggtttg cattacccct gcggagaggt
    22081 tgatttcatt acccggaatg accatcgcaa tagataaacc gccaacagag cttaagcaga
    22141 ttgccgccac catcagcagt aacatagcca gtggatagtc gcgcccgggg ttgctcattt
    22201 cattgacgtg agttgcggaa gcttctacgc ccatataact caaaatgaag gcaacaaata
    22261 caaccagtgt gcccacttta gagaagtcag ggaagaaggt cttcgaatcc atttcgatag
    22321 caacgggggc accggagtgc agataaatag ccgctaatgc gatcaaaata aatgcaggta
    22381 acaggatacc ggcgaagaag ccaactttag caattcgcgc cgtgtatttc gtgccaccaa
    22441 actgcgttaa tgccagcgcc caaagaatga tgagtgctgc aatagttttg gtaatggggt
    22501 cttcattcag cgctggccat ttcaggatgt aggagagtgc ccctaacacg aaatagagca
    22561 tcggaataaa accaatggcg atttgcagat agccaaatga gatcgctgca aatccccatc
    22621 tcggccccag agtatttgat acccaggcga agacaccacc ttcttcccag ccgtcgacgg
    22681 tggccatttc cgcagcacaa agtcccacgg gaataaacca taaaatcccg cctaatagca
    22741 ggaagaagac taatgaaaag cccgatgttg cgaaggtagg gtattcataa acagccatta
    22801 ccatcgatgc cgttatggca aagaatccga gtaatgtgag ctgcttagct ttacctgtct
    22861 gtactgatgt agccatatta tccccctaaa atggtattcc tgtcggaacc gcacctgttt
    22921 tgttctgaag cgtattcaga acaatatttt ccgttgctaa tgccagtgaa cagactttgg
    22981 aaattgtccc gaaacgggtt cgtttcggga caccgttacc gttaaacgtt atcaggtatg
    23041 tttaaagctg ttctgctggg caataccctg cagtttcggg tgatcgctga gatatttcag
    23101 ggaggctttg tagtcttcca gcaacagttc aacaaagtcc
//
LOCUS       DADMHC010000048        22903 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.048, whole genome shotgun sequence.
ACCESSION   DADMHC010000048 DADMHC010000000
VERSION     DADMHC010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22903)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22903)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22903
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.048"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(378..1355)
                     /gene="epmA"
                     /locus_tag="JNZ57_001568"
     CDS             complement(378..1355)
                     /gene="epmA"
                     /locus_tag="JNZ57_001568"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000004771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P--(R)-beta-lysine ligase"
                     /protein_id="HAY8827831.1"
                     /translation="MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMS
                     QATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNE
                     EMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEID
                     PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPAS
                     QASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQ
                     HPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA"
     gene            1680..3488
                     /gene="frdA"
                     /locus_tag="JNZ57_001569"
     CDS             1680..3488
                     /gene="frdA"
                     /locus_tag="JNZ57_001569"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase (quinol) flavoprotein
                     subunit"
                     /protein_id="HAY8827832.1"
                     /translation="MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRS
                     HTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGC
                     PWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLD
                     ILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAL
                     SHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLG
                     EPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICE
                     LAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRL
                     GSNSLAELVVFGRLAGEQATERAATAGNGNEEAIEAQAAGVEQRLKDLVNQDGGENWA
                     KIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIE
                     LGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLEY
                     SDVKITTLPPAKRVYGGEADAADKAEAANKKEKANG"
     gene            3481..4215
                     /locus_tag="JNZ57_001570"
     CDS             3481..4215
                     /locus_tag="JNZ57_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HAY8827833.1"
                     /translation="MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYI
                     KDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERD
                     LVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACP
                     QFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKH
                     VDPAAAIQQGKVESSKDFLIATLKPR"
     gene            4226..4621
                     /gene="frdC"
                     /locus_tag="JNZ57_001571"
     CDS             4226..4621
                     /gene="frdC"
                     /locus_tag="JNZ57_001571"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HAY8827834.1"
                     /translation="MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELI
                     FGLFALKNGPEAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDE
                     KMGPEPIIKSLWAVTVVATIVILFVALYW"
     gene            4632..4991
                     /gene="frdD"
                     /locus_tag="JNZ57_001572"
     CDS             4632..4991
                     /gene="frdD"
                     /locus_tag="JNZ57_001572"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HAY8827835.1"
                     /translation="MINPNPKHSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGL
                     FPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFY
                     GLAAILTVVTLIGIVTI"
     gene            5054..6187
                     /gene="blaEC"
                     /locus_tag="JNZ57_001573"
     CDS             5054..6187
                     /gene="blaEC"
                     /locus_tag="JNZ57_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BlaEC family class C beta-lactamase"
                     /protein_id="HAY8827836.1"
                     /translation="MFKTTLCALLITASCSTFAAPQQINDIVHRTITPLIEQQKIPGM
                     AVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLS
                     DPATKYWPELTAKQWNGITLLHLATYTAGGLPLQMPDEVKSSSDLLRFYQNWQPAWAP
                     GTQRLYANSSIGLFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWG
                     YREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLTPLDINEKTLQQGIQLAQSRYW
                     QIGDMYQGLGWEMLDWPVNPDSIINGSDNKIALAARPVKAIKPPTPAVRASWVHKTGA
                     TGGFGSYVAFIPEKELGIVMLANKNYPNPARVAAACQILNALQ"
     gene            6276..6809
                     /locus_tag="JNZ57_001574"
     CDS             6276..6809
                     /locus_tag="JNZ57_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HAY8827837.1"
                     /translation="MRLLPLVAAATAAFLVVACSSPTPPRGVTVVNNFDAKRYLGTWY
                     EIARFDHRFERGLEKVTATYSLRDGGGLNVINKGYNPDREMWQQSEGKAYFTGAPTRA
                     ALKVSFFGPFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVAT
                     REGFDVSKFIWVQQPGS"
     gene            complement(6806..7123)
                     /locus_tag="JNZ57_001575"
     CDS             complement(6806..7123)
                     /locus_tag="JNZ57_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound-resistance protein
                     SugE"
                     /protein_id="HAY8827838.1"
                     /translation="MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMA
                     LLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKL
                     STH"
     gene            complement(7305..7451)
                     /gene="ecnB"
                     /locus_tag="JNZ57_001576"
     CDS             complement(7305..7451)
                     /gene="ecnB"
                     /locus_tag="JNZ57_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein toxin entericidin B"
                     /protein_id="HAY8827839.1"
                     /translation="MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAAT
                     KAQQ"
     gene            complement(7562..7687)
                     /gene="ecnA"
                     /locus_tag="JNZ57_001577"
     CDS             complement(7562..7687)
                     /gene="ecnA"
                     /locus_tag="JNZ57_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein antitoxin entericidin A"
                     /protein_id="HAY8827840.1"
                     /translation="MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS"
     gene            complement(7739..8305)
                     /gene="efp"
                     /locus_tag="JNZ57_001578"
     CDS             complement(7739..8305)
                     /gene="efp"
                     /locus_tag="JNZ57_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004871142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HAY8827841.1"
                     /translation="MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLR
                     RLLTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGD
                     NAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGA
                     VVKVPLFVQIGEVIKVDTRSGEYVSRVK"
     gene            8347..9396
                     /gene="epmB"
                     /locus_tag="JNZ57_001579"
     CDS             8347..9396
                     /gene="epmB"
                     /locus_tag="JNZ57_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000940527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HAY8827842.1"
                     /translation="MAHIVTLNTPSREDWLTQLADVVTDPDELLRLLNIDADEKLLAG
                     RSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEFVVASGFSTDPLEEQHSVVP
                     GLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQGNKRNWQTALEYVAAHPELDEM
                     IFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTL
                     QILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFD
                     AGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVPKLAREIGGEPSKTP
                     LDLQLRQQLLIKQGS"
     gene            9770..10639
                     /locus_tag="JNZ57_001580"
     CDS             9770..10639
                     /locus_tag="JNZ57_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827843.1"
                     /translation="MAISIKGVNTGVIRKSNNFIALALKIKEPRNKESLFFMSVMELR
                     DLLIALESRLHQKHKLDAAARLQYEQARDKVIKKMAENIPEILVDELKNADINRRVNT
                     LELTDNQGENLTFVLTLHDGSKCELVVNELQIEMLARAIIHAINNAEMRELALRITSL
                     LDFLPLYDVDCQENGNLEYDTYSQPEWKHNLFDHYLAVLYRFKDESGKEQFSGAVVKT
                     REATPGKEVEAITRRMLDFSPRLKKLAGVPCQVYVRTVAANNAQPLTQDQCLRALHHL
                     RVQSTSKTAPQAK"
     gene            complement(10842..11195)
                     /locus_tag="JNZ57_001581"
     CDS             complement(10842..11195)
                     /locus_tag="JNZ57_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418568.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4156 domain-containing protein"
                     /protein_id="HAY8827844.1"
                     /translation="MHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQ
                     LIGTATGKQSNWLSGQHGEEGGSMRGAANDLRNQAAAMGGNVIYGISSPSQGMLSSFV
                     PTDSQIIGQVYKCPN"
     gene            complement(11333..12979)
                     /gene="groL"
                     /locus_tag="JNZ57_001582"
     CDS             complement(11333..12979)
                     /gene="groL"
                     /locus_tag="JNZ57_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120975.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HAY8827845.1"
                     /translation="MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSF
                     GAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITE
                     GLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGK
                     LIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP
                     FILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAV
                     KAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIID
                     GVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAP
                     LRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAA
                     SVAGLMITTECMVTDLPKNDAADLGAAGGMGGMGGMGGMM"
     gene            complement(13023..13316)
                     /locus_tag="JNZ57_001583"
     CDS             complement(13023..13316)
                     /locus_tag="JNZ57_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004391824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HAY8827846.1"
                     /translation="MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG
                     NGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVEA"
     gene            13592..14848
                     /gene="yjeH"
                     /locus_tag="JNZ57_001584"
     CDS             13592..14848
                     /gene="yjeH"
                     /locus_tag="JNZ57_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-methionine/branched-chain amino acid
                     transporter"
                     /protein_id="HAY8827847.1"
                     /translation="MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAAQVAGNNSLWA
                     WPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPA
                     ALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIV
                     AIWWAGDIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFP
                     RALMIGLLLAGLVYWGCTVVVLHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGY
                     LACFASLNIYIQSFARLVWSQAQHNPDHYLARLSSRHIPNNALNAVLGCCVVSTLVIH
                     ALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKS
                     LYALIVLAGLWLLLPKRKTPENGITT"
     gene            complement(14864..15340)
                     /gene="fxsA"
                     /locus_tag="JNZ57_001585"
     CDS             complement(14864..15340)
                     /gene="fxsA"
                     /locus_tag="JNZ57_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418564.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein FxsA"
                     /protein_id="HAY8827848.1"
                     /translation="MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGM
                     SLVRNQGFKNFVLMQQKMAAGENPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLP
                     PVQKHLTVKLMPHLRFSRMPGGGFSAGTGGGNTFDGEYQRKDDERDRLDHKDDRQD"
     gene            15677..17113
                     /gene="aspA"
                     /locus_tag="JNZ57_001586"
     CDS             15677..17113
                     /gene="aspA"
                     /locus_tag="JNZ57_001586"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313147.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HAY8827849.1"
                     /translation="MSNNIRIEEDLLGTREVPADAYYGVHTLRAIENFYISNNKISDI
                     PEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGA
                     GTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSL
                     IKLVDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNI
                     QRTAELLLEVNLGATAIGTGLNTPKEYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGA
                     YVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPE
                     VVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCIN
                     GITANKEVCEGYVYNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLERGLLTE
                     AELDDIFSVQNLMHPAYKAKRYTDESEQ"
     gene            17231..18532
                     /locus_tag="JNZ57_001587"
     CDS             17231..18532
                     /locus_tag="JNZ57_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HAY8827850.1"
                     /translation="MLVVELIIVLLAIFLGARLGGIGIGFAGGLGVLVLAAIGVKPGN
                     IPFDVISIIMAVIAAISAMQVAGGLDYLVHQTEKLLRRNPKYITILAPIVTYFLTIFA
                     GTGNISLATLPVIAEVAKEQGVKPCRPLSTAVVSAQIAITASPISAAVVYMSSVMEGH
                     GISYLHLLSVVIPSTLLAVLVMSFLVTMLFNSKLSDDPIYRKRLEEGLVELRGEKQIE
                     IKSGAKTSVWLFLLGVVGVVIYAIINSPSMGLVEKPLMNTTNAILIIMLSVATLTTVI
                     CKVDTDNILNSSTFKAGMSACICILGVAWLGDTFVSNNIDWIKDTAGEVIQGHPWLLA
                     VIFFFASALLYSQAATAKALMPMALALNVSPLTAVASFAAVSGLFILPTYPTLVAAVQ
                     MDDTGTTRIGKFVFNHPFFIPGTLGVALAVCFGFVLGSFML"
     gene            18648..18986
                     /gene="cutA"
                     /locus_tag="JNZ57_001588"
     CDS             18648..18986
                     /gene="cutA"
                     /locus_tag="JNZ57_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent cation tolerance protein CutA"
                     /protein_id="HAY8827851.1"
                     /translation="MLDEKSSNTASVVVLCTAPDEATAQDLAAKVLAEKLAACATLIP
                     GATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTD
                     YLSWLNASLR"
     gene            18962..20659
                     /locus_tag="JNZ57_001589"
     CDS             18962..20659
                     /locus_tag="JNZ57_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HAY8827852.1"
                     /translation="MAQRIFTLILLLCSTSVFAGLFDAPGRSQFVPADQAFTFDFQQN
                     QHDLNLTWQIKDGYYLYRKQIRITPEHAKIADVQLPQGVWHEDEFYGKSEIYRDRLTL
                     PVTINQASAGATLTVTYQGCADAGFCYPPETKTVPLSEVVANNAASQPVSVSQQEQHT
                     AQLPFSALWALLIGIGIAFTPCVLPMYPLISGIVLGGKQRLSTARALLLTFIYVQGMA
                     LTYTALGLVVAAAGLQFQAALQHPYVLIGLAIVFTLLAMSMFGLFTLQLPSSLQTRLT
                     LMSNRQQGGSPGGVFVMGAIAGLICSPCTTAPLSAILLYIAQSGNMWLGGGTLYLYAL
                     GMGLPLMLITVFGNRLLPKSGPWMEQVKTAFGFVILALPVFLLERVIGDVWGLRLWSA
                     LGVAFFGWAFITSLQAKRGWMRVVQIILLAAALVSVRPLQDWAFGATHTAQTQTHLNF
                     TQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQA
                     NITANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP"
     gene            20696..21271
                     /locus_tag="JNZ57_001590"
     CDS             20696..21271
                     /locus_tag="JNZ57_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY8827853.1"
                     /translation="MQREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPD
                     KEAILYDALRYLSQQIDVWRRQLMLDETQTAEQKLLARYQALSECVKNNRYPGCLFIA
                     ACTFYPDPGHPIHQLADQQKSAAYDFTHELLTTLEVDDPAMVAKQMELVLEGCLSRML
                     VNRSQADVDTAHRLAEDILRFARCRQGGALT"
     gene            21378..21453
                     /locus_tag="JNZ57_001591"
     tRNA            21378..21453
                     /locus_tag="JNZ57_001591"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21411..21413,aa:Phe,seq:gaa)
     gene            21651..22622
                     /locus_tag="JNZ57_001592"
                     /pseudo
     CDS             21651..22622
                     /locus_tag="JNZ57_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311870.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
     gene            22760..>22903
                     /locus_tag="JNZ57_001593"
     CDS             22760..>22903
                     /locus_tag="JNZ57_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000878026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HAY8827854.1"
                     /translation="MKYTPVGVDIAKHVIQIHFINEHTGEVVDKQLRRQDFLTFFGNR
                     EPCL"
BASE COUNT         5696 a         5896 c         5690 g         5621 t
ORIGIN      
        1 gaatggaata aagaataaca atgcagaaaa tatataaaag ggaatcgcac tataacccat
       61 taagtaataa gccgatgggc tattggcaaa tccaaatacg gaagtaaaga tcatcaatat
      121 gagtcctatc agactcatct tttttatcgt gtgaggcatg aaaccatcct tcatttcagc
      181 gcgtgtataa cacgtgccca ctgaactgca ctgcgcaaca ttgagcaggc agcgtaaaaa
      241 ccaatacaga attgataccc ggatgatatc aaatatccag tcttaaattg tggcctttaa
      301 cggaaaaatg aaaatatatg ctacagaatg gcgcttatca cgccattctt cgctgttaat
      361 tcagtaattt ttcagaatta tgcccggtca acgctaaagg cgatgacttc agccagtgtc
      421 tccgcgccca gcgccaacat caccagacga tcaacaccta atgccacgcc ggaacagtca
      481 ggcataccga ctttcaaggc ttcaatcaga ttctggtcaa tggggtgctg cggcaaaccg
      541 cgcgccgcgc gcttacggtt atcttgttca aagcgttgtt gctgctcacg ggcatccgtt
      601 aattcatgga aaccattcgc cagctcaata cctttataat aaacctcaaa gcgttcagcg
      661 acccgatgat cttcggtact gatttgcgcc agtgatgcct ggctggctgg aaagtggtac
      721 acaaaggtcg gtttttcttt gccaatattt ggctctacgc caaaggtaaa cagcaattgt
      781 agcaacgtgt cgcggtcttc ttcggtatca gcaacgttac tcaaatccag tttcgctgcg
      841 acttcccgca gttgcgtttt gtcggcagag agcgggtcaa tttccagata acgcaagaaa
      901 gcttgttgat aagaaaggct ttctgctgcc gggcagtcca gcacctgttg taagagatcg
      961 tccacctcgt tcatcaaccg gtacatatca tagtgcggtc gataccactc aagcatagtg
     1021 aactcagggt tgtgataacg ccccatctct tcattacgga agctgcggca cagctggaat
     1081 accggcccac aaccggcaac cagcaggcgt ttcatatggt attccgggct ggtcattaac
     1141 cagagattca tcccctgcga atgcccgggg ccaacgaaac gtgtctcaaa cgggaccaaa
     1201 tgaatatcgg ttaccgtcgc ctggctcata caaggcgtct ccacctccag cactccacga
     1261 tcagcaaaga aacgacggat ctccgccata atcgccgcgc gttttaataa gttaggaatg
     1321 gatgcgctcg gctgccagga tgccgtttcg ctcatagtta aatctccagt ttttgacaag
     1381 ggcacgaagt ctactcgcaa cgcgacggcg agacaaattt tacgcaggaa tcaaacagcg
     1441 gtgggcagtg actaaaaaaa gcacgatctg atggtttagt aattaaatga atcatcttca
     1501 gtgataattt agccctcttg cgcactaaaa aaatcgatct cgtcaaattt cagacttatc
     1561 catcagacta tactgttgta cctataaagg agcagtggaa tagcgttcgc agaccgtaac
     1621 tttcaggcac ttaccctgaa gtacggggct gtgggataaa aacaatctgg aggaatgtcg
     1681 tgcaaacctt tcaagccgat cttgccattg taggcgccgg tggcgcggga ttacgtgctg
     1741 caattgctgc cgcgcaagca aatccaaatg caaaaatcgc actaatctca aaagtatacc
     1801 cgatgcgtag ccataccgtt gctgcagaag ggggctccgc cgctgtcgcg caggatcatg
     1861 acagcttcga atatcacttt cacgatacag tagcgggtgg cgactggttg tgtgagcagg
     1921 atgtcgtgga ttatttcgtc caccactgcc caaccgaaat gacccaactg gaactgtggg
     1981 ggtgcccatg gagccgtcgc ccggatggta gcgtcaacgt acgtcgcttc ggcggcatga
     2041 aaatcgagcg cacctggttc gccgccgata agaccggctt ccatatgctg cacacgctgt
     2101 tccagacctc tctgcaattc ccgcagatcc agcgttttga cgaacatttc gtgctggata
     2161 ttctggttga tgatggtcat gttcgcggcc tggtagcaat gaacatgatg gaaggcacgc
     2221 tggtgcagat ccgtgctaac gcggtcgtta tggctactgg cggtgcgggt cgcgtttatc
     2281 gttacaacac caacggcggc atcgttaccg gtgacggtat gggtatggcg ctaagccacg
     2341 gcgttccgct gcgtgacatg gaattcgttc agtatcaccc aaccggtctg ccaggttccg
     2401 gtatcctgat gaccgaaggc tgccgtggtg aaggcggtat tctggtcaac aaaaatggct
     2461 accgttatct gcaagattac ggcatgggcc cggaaactcc gctgggcgag ccgaaaaaca
     2521 aatatatgga actgggtcca cgcgacaaag tttctcaggc cttctggcac gaatggcgta
     2581 aaggcaacac catctccacg ccgcgtggcg atgtggttta tctcgacttg cgtcacctcg
     2641 gcgagaaaaa actgcatgaa cgtctgccgt tcatctgcga actggcgaaa gcgtacgttg
     2701 gcgtcgatcc ggttaaagaa ccgattccgg tacgtccgac cgcacactac accatgggcg
     2761 gtatcgaaac cgatcagaac tgtgaaaccc gcattaaagg tctgttcgcc gtgggtgaat
     2821 gttcctctgt tggtctgcac ggtgcaaacc gtctgggctc caactccctg gcggaactgg
     2881 tggtcttcgg ccgtctggcc ggtgaacaag cgacagagcg tgcagcaact gccggtaatg
     2941 gcaacgaaga ggcaattgaa gcgcaggcag ctggcgttga acaacgtctg aaagatctgg
     3001 ttaaccagga tggcggcgaa aactgggcga agatccgcga cgaaatgggc ctagcaatgg
     3061 aagaaggttg cggtatctac cgtacgccgg aactgatgca gaaaaccatc gacaagctgg
     3121 cagagctgca ggaacgcttc aagcgcgtgc gcatcaccga cacctccagc gtgttcaaca
     3181 ccgacctgct ctacaccatt gaactgggcc acggtctgaa cgttgctgaa tgtatggcgc
     3241 actccgcaat ggcacgtaaa gagtcccgcg gcgcacacca gcgtctggac gaaggttgca
     3301 ccgagcgtga cgacgtcaac ttcctcaaac acaccctcgc cttccgcgat gctgatggca
     3361 cgactcgcct ggagtacagc gacgtgaaga ttactacgct gccgccagct aaacgcgttt
     3421 acggtggcga agcggatgca gccgataagg cggaagcagc caataagaag gagaaggcga
     3481 atggctgaga tgaaaaacct gaaaattgag gtggtgcgct ataacccgga agtcgatacc
     3541 gcaccgcata gcgcattcta tgaagtgcct tatgacgcaa ctacctcatt actggatgcg
     3601 ctgggctaca tcaaagacaa cctggcaccg gacctgagtt accgctggtc ctgccgtatg
     3661 gcgatttgtg gttcctgcgg catgatggtt aacaacgtgc caaaactggc atgtaaaacc
     3721 ttcctgcgtg attacaccga cggtatgaag gttgaagcgt tagctaactt cccgattgaa
     3781 cgcgatctgg tggtcgatat gacccacttc atcgaaagtc tggaagcgat caaaccgtac
     3841 atcatcggca actcccgcac cgcggatcag ggtactaaca tccagacccc ggcgcagatg
     3901 gcaaagtatc accagttctc cggttgcatc aactgtggtc tgtgctacgc cgcgtgcccg
     3961 cagtttggcc tgaacccaga gttcatcggt ccggctgcca ttacgctggc gcatcgttat
     4021 aacgaagata gccgcgacca cggtaagaag gagcgtatgg cgcagttgaa cagccagaac
     4081 ggcgtatgga gctgtacttt cgtgggctat tgctccgaag tctgcccgaa acacgtcgat
     4141 ccggctgcgg ccattcagca gggcaaagta gaaagttcga aagactttct tatcgcgacc
     4201 ctgaaaccac gctaaggagt gcaacatgac gactaaacgt aaaccgtatg tacggccaat
     4261 gacgtccacc tggtggaaaa aattgccgtt ttatcgcttt tacatgctgc gcgaaggcac
     4321 ggcggttccg gctgtgtggt tcagcattga actgattttc gggctgtttg ccctgaaaaa
     4381 tggcccggaa gcctgggcgg gattcgtcga ctttttacaa aacccggtta tcgtgatcat
     4441 taacctgatc actctggcgg cagctctgct gcacaccaaa acctggtttg aactggcacc
     4501 gaaagcggcc aatatcattg taaaagacga aaaaatggga ccagagccaa ttatcaaaag
     4561 tctctgggcg gtaactgtgg ttgccaccat cgtaatcctg tttgttgccc tgtactggta
     4621 aggagcctga gatgattaat ccaaatccaa agcattctga cgaaccggta ttctggggcc
     4681 tcttcggggc cggtggtatg tggagcgcaa ttattgcgcc ggtgatgatc ctgctggtgg
     4741 gtattctgct gccactgggg ctgtttccgg gtgatgcgct gagctacgag cgcgttctgg
     4801 cgttcgcgca gagcttcatt ggtcgcgtat tcctgttcct gatgatcgtt ctgccgctgt
     4861 ggtgtggttt acaccgtatg caccacgcga tgcacgatct gaaaattcac gtgcctgcgg
     4921 gcaaatgggt tttctacggt ctggctgcta tcctgacagt tgtcacgctg attggtatcg
     4981 ttacaatcta acgtatcgcc aatgtaaatc cggcccgcct atggcgggcc gttttgtatg
     5041 gaaaccagac cttatgttca aaacgacgct ctgcgcctta ttaattaccg cctcttgctc
     5101 cacatttgct gcccctcaac aaatcaacga tattgtgcat cgcacaatta ccccgcttat
     5161 agagcaacaa aagatccccg gtatggcggt ggcggtaatt tatcagggta aaccttatta
     5221 ctttacctgg ggctatgcgg acatcgccaa aaagcagccc gtcacacagc aaacgttgtt
     5281 tgagttaggt tcggtcagca aaacatttac gggcgtgctt ggtggcgacg ctattgctcg
     5341 aggggaaatc aagttaagcg atcccgcaac aaaatactgg cctgaactta ccgctaaaca
     5401 gtggaatggg atcacactat tacatcttgc gacctacacc gctggcggcc tgccattgca
     5461 gatgccggat gaagtgaaat cctcaagcga cttgctgcgc ttctatcaaa actggcagcc
     5521 tgcatgggct ccaggaacac aacgtctgta tgccaactcc agtatcggtt tgttcggcgc
     5581 actggctgtg aagccgtctg gtttgagttt tgagcaggcg atgcaaactc gtgtcttcca
     5641 gccactcaaa ctcaaccata cgtggattaa tgtaccgccc gcagaagaaa agaattacgc
     5701 ctggggatat cgcgaaggca aggcagttca tgtttcgcca ggggcgttag atgctgaagc
     5761 ttatggtgtg aagtcgacca ttgaagatat ggcccgctgg gtgcaaagca atttaacccc
     5821 ccttgatatc aatgagaaaa cgcttcaaca agggatacaa ctggcacaat ctcgctactg
     5881 gcaaatcggc gatatgtatc agggcctggg ctgggaaatg ctggactggc cggtcaatcc
     5941 tgacagcatc attaacggca gtgacaataa aattgcactg gcagcacgcc cggtaaaagc
     6001 gattaagccc ccaactcctg cagtacgcgc atcatgggta cataaaacgg gggcgaccgg
     6061 cggatttggt agctatgtcg cgtttattcc agaaaaagag ctgggtatcg tgatgctggc
     6121 taacaaaaac tatcccaatc cagcgagagt cgccgccgcc tgtcagattc tcaacgctct
     6181 acagtaaaat ttcatcgggt ccgaattttc ggaccttttc tgcgcttttc cttgctgtca
     6241 tctacactta gaaaaaaacc agtaaggaaa catttatgcg cctgctccct ctcgttgccg
     6301 cagcgacagc tgcatttctg gtcgttgcct gcagttctcc tacgccgccg cgtggcgtga
     6361 cagtagtgaa taatttcgac gctaaacgct atctcggtac ctggtatgag attgcccgtt
     6421 ttgatcaccg ttttgaacgt ggactggaaa aagtcaccgc aacatacagt ctgcgtgatg
     6481 gcggcggcct gaatgtcatc aataaaggct ataaccctga cagagaaatg tggcagcaga
     6541 gtgaagggaa agcgtacttt accggcgcac caacacgcgc tgcgctgaaa gtgtcattct
     6601 ttggtccttt ctatggcggt tataacgtca ttgcacttga tcgggaatac cgccatgcgc
     6661 tggtttgcgg cccggaccgc gactacctgt ggatactctc ccgcacgcca accatttctg
     6721 acgaagtgaa acaggagatg ctggcagtcg cgacccggga agggtttgat gtcagtaagt
     6781 ttatttgggt acagcagccc ggtagttagt gagtgctgag tttcagacca ataatcccca
     6841 atacgattaa cgccagactc gccaggcgca tcgggttagc ggactcaccg agcagcacaa
     6901 tgccggtgat agccgcgccg actgcgccaa tacccgtcca cacggcataa gccgtcccta
     6961 ctggtaacga tttcatcgcc caggcaagta gcgccatact gacaatcatc gccgtcacgg
     7021 taataacact cggcgtcaaa cgactaaagc cgtgggtata tttcaggcca acggcccata
     7081 ccacttccag cagaccagca ataactaaga taatccagga catatcaggc tccggagaat
     7141 tggggccgtc cccggtgaaa agacgcgttt gcaggtcgtc ctgcaaagct gatggttgaa
     7201 cggatatttt gccaggtggc aggggaattt caactattac cttagtgact atcgcagaaa
     7261 aaacaaacgg cacgacacag ctgtcgtacc gttattgctt attgctattg ctgcgctttc
     7321 gttgctgcgc cagaaatcgc gttaccgcca tcagaaatgt cttcaccaac gccacgcgtg
     7381 gtgttgcagg cagttaatac tgttgaaagc accagaacag aaaagatcgc tgcaattgtc
     7441 ttcttcacca taacgtcttc cttttaggta atgttattta tgtttgccta tagcaaatta
     7501 ataatagaca acatcgccaa aaatgacgga aatctgatga tttttcggaa gagaagaaaa
     7561 attagctggc agcgcgagag atggagttgc cgagatgttt gatgtcttcg ccgaaaccgc
     7621 gagcggtgtt acagcccgtg agcagcgtac tagcaagcaa aacaagaacg ataaggcgtt
     7681 tcatcatctc tgacctgaat aagtgatggt gcagcctgca ggccgcacca caaccgcatt
     7741 acttcacgcg agagacgtat tcaccagagc gggtatccac tttgatgact tcgccgattt
     7801 gtacgaacag cggaacctta accacagcgc cagtagacag ggtagccggt ttgccgccag
     7861 tacctgcggt atcacctttc aggcccggat cggtatcaac gatttccagt tcaacgaagt
     7921 tcggcggagt aacggagatc ggctgaccat tccacagagt tacgatacac tctgcctgat
     7981 ccagcagcca tttagcgtta tcgccaattg cttttgcatc agcagacagc tgctcgaaag
     8041 tttcgttgtt catgaagtgc cagaactcac cgtcgttgta caggtaagtc aggttcatat
     8101 cgacaacatc agcgccttca gcggaatcag tagatttgaa ggttttttct acgcgagtac
     8161 cggtcagcag acgacgcagt ttaacgcgag caaatgcctg gcctttaccc ggttttacga
     8221 attcactcgc ttcaaccgcg taaggttcgc cgtctaacat gattttaaga ccagcacgaa
     8281 aatcgttgct atagtacgtt gccataaggc cctctgaaat ttgttaattg gtagctaagc
     8341 cacaaaatgg cacatattgt aaccctaaat accccatcca gagaagattg gttaacgcaa
     8401 cttgccgatg ttgtgaccga tcctgatgaa cttctgcgtc ttttgaatat agacgcggac
     8461 gaaaaactgt tggccggacg cagcgccaaa aagctgtttg ccctgcgtgt gccccgctca
     8521 tttatcgatc gcatggagaa aggcaatccg gacgatcctc ttttgcgtca ggtacttacc
     8581 tcgcaagatg agtttgtcgt cgcgtccgga ttctccaccg acccactgga agaacagcac
     8641 agcgtagtgc ctggtttgtt gcataaatac cacaaccggg cgcttttgct ggtcaaaggc
     8701 ggctgcgcgg taaattgccg ctattgcttc cgtcgccact tcccctatgc cgaaaatcag
     8761 ggcaacaagc gtaactggca gactgcactt gagtatgttg ctgcgcatcc ggaactggac
     8821 gagatgattt tctccggcgg cgatccgctg atggcgaaag atcacgagct ggactggttg
     8881 ctcacacaac tggaagccat cccgcatatc aaacgtctgc ggattcacag ccgtctgccg
     8941 attgtgatcc cggcacgcat cacagatgcg ctggttgaac gcttttcaca ttctacgctg
     9001 caaatcctgc tggtgaatca catcaaccat gccaatgaga tagatgaaac attccgtcag
     9061 gcgatggcta agttgcgccg ggtaggcgtt actttgctga accagagcgt tctgttacgt
     9121 gatgtgaacg ataacgcaca aacgctggca aacctgagta atgcgttgtt cgatgccggc
     9181 gtgatgccgt attacctgca tgtgctcgat aaagtacagg gcgcggcgca ttttatggtg
     9241 agtgatgacg aagcacggca gattatgcgt gagttgctga cattggtgtc gggatatctg
     9301 gtgccgaaac tggcgcgaga aattggcggc gaacccagca aaacgccgct ggatctccag
     9361 ctacgccagc agttactgat taaacaggga agttaaacat taaaattgcc tgatgcgcta
     9421 cgcttatcag gcctacatcg tgcattgaaa ttgaatggat ttgcaatgaa ctgtaggccg
     9481 gataaggcgt ttacgccgca tccggcaaga gcaacaaacg caagtacagc aacctgtcat
     9541 taaactgaga aatttaatct ttgcccgttg cataaccttt aattattcat atgcattgct
     9601 gttgttactt tttatatagc taacaccaat aattaacctt tcttttctgt ttatatagag
     9661 tgagcacggc tatttatgtt attttaacaa ctattactac caagcccatt tatctggctt
     9721 ataaattaaa attaattatt taattgagaa atggttaggg agaacctaca tggccataag
     9781 catcaagggt gttaataccg gtgttattcg caagagtaat aatttcattg cactggcgct
     9841 gaaaattaaa gaacctcgca ataaagaatc gttgttcttt atgtctgtca tggaactgcg
     9901 cgacctgctg attgcgctgg aaagtcgtct gcatcaaaag cataaactgg atgctgctgc
     9961 acgccttcag tatgagcaag ctcgcgataa agtcattaag aaaatggcag aaaacatccc
    10021 agaaattctg gttgatgagc ttaaaaatgc cgatattaat cgtcgggtta acacgctgga
    10081 acttaccgat aatcaaggcg aaaatcttac cttcgtatta acgctacatg acggtagcaa
    10141 atgtgagtta gtcgtcaatg agttgcagat tgaaatgcta gcgcgagcaa tcattcatgc
    10201 aattaataat gcggaaatgc gtgaactggc attacgtatt acctcactgt tagatttcct
    10261 gccgttatat gacgttgact gccaggaaaa tggcaatctg gaatatgaca cctattccca
    10321 accggaatgg aaacataact tgttcgacca ttatctggcg gtgctttacc gctttaaaga
    10381 tgaaagtggc aaagaacaat ttagcggcgc agtggtgaaa acgcgtgaag caacgccggg
    10441 taaagaagta gaggcgatca ctcgccgaat gcttgatttc agcccacgac tgaaaaaact
    10501 cgcgggtgtg ccatgtcagg tctatgttcg caccgtagcg gcgaataacg cccaaccgct
    10561 aacccaggat caatgcttac gcgcgctgca tcacttacgt gttcaatcca ccagcaaaac
    10621 tgcaccacag gcgaaataat ctcatctttg ctaatgcgag gctggagcca tccagcctga
    10681 aatgactgat aacgtgatcg ttggtcatgc cggatgcggc gtaaacgcct tatccggcct
    10741 acaaattctc aagcattcaa tcagttgcaa tgcctgctgt aggcctgata agcgaagcgc
    10801 atcaggcaat aatacgtttg tcacccagcc tctggatcac atcagttcgg gcacttataa
    10861 acctgaccga taatctggct atccgtcggg acaaaactgg acaacattcc ctgcgacggg
    10921 ctgctgatgc cataaatcac gttaccgccc attgcagccg cctggttgcg cagatcgttt
    10981 gctgcgccgc gcatagaacc gccctcttct ccgtgttgcc cggaaagcca gttgctttgc
    11041 ttacctgtcg cagtaccaat cagctggcac tctgcgcctg gctgctcgtc cacaatgcgt
    11101 acactctgac cggcagcact caattcgttg ctggagctac aacccgccat cagtagcgcg
    11161 gcaccgacaa tccctgctaa gtattttacg tgcatgttat tccccataat caatgagctg
    11221 gacgccactc gcgtcgtccg tgtctgaatc ttatactaga aagatgacca aaagaaaaac
    11281 ccccagacat ttctgcccgg gggtttgttt atttctgcga ggtgcagggc aattacatca
    11341 tgccgcccat gccacccatg ccgcccatac cgccagcagc gcctaagtca gctgcatcgt
    11401 ttttcggcag gtcggtaacc atgcactcgg tggtgatcat caggccagcc acagaagccg
    11461 cgtactgcag agcagaacgg gttactttgg ttggatccag gatacccatg tcgatcatgt
    11521 tgccgtattc ttcggttgct gcgttgtaac cgtagttgcc gtcgccgcct ttaacagtgt
    11581 tagcaacaac agacggttct tcgccgcagt tcaatacgat ctgacgcagc ggagcttcca
    11641 ttgcacgcag tgcaactttg atacccacgt tctggtcttc gttctgacca cgcaggtcag
    11701 ccagtttaga cgctacgcgg atcagcgcaa caccaccacc agcaaccacg ccttcttcta
    11761 ccgcagcacg ggtcgcgtgc agggcatctt caacgcgtgc ttttttctct ttcatttcaa
    11821 cttcggtagc agcacctact ttgataactg caacgccgcc tgccagtttc gctacgcgct
    11881 cctgcagttt ttcacggtcg tagtcagaag ttgcttcttc aatctgctga cggatctgag
    11941 caacacggcc ctggattgca gcttcttcac ccacgccatc aatgatggtg gtggtgtctt
    12001 tgttgatcac aacacgttta gcctgaccca ggtcttccag ggttgctttt tccagctcca
    12061 taccgatctc ttcagagatt acggtaccgc cagtcagggt tgcgatatcc tgcagcatag
    12121 ctttacggcg atcgccgaag cccggagctt taaccgcagc aactttcacg atgccacgca
    12181 tggtgttaac aaccagagtt gccagcgctt cgccttcaac atcttcagcg atgatcagca
    12241 gcggtttacc tgctttagca acggcttcca gaaccggcag catttcgcgg atgttggaga
    12301 ttttcttgtc agccagcagg atgaacgggc tttccagttc tactgcgcca gtttccggct
    12361 tgttgatgaa gtaaggagac aggtagccac ggtcgaactg cataccttca accacgtcca
    12421 gttcgtcctg cagaccggta ccgtcttcaa cggtgataac gccttcttta ccgactttgt
    12481 ccatcgcttc agcgatcagt ttacctacgg tttcgtcgga gttagcggag atggtaccaa
    12541 cctgagcaat cgctttagag tcagagcatg gtacggacag cgctttcagt tcttcaactg
    12601 cagcggtaac agctttgtcg ataccacgtt tcaggtccat cgggttcatg cccgcagcaa
    12661 ctgctttcag accctcagtg atgatagcct gagccagtac ggttgcagtg gtggtaccgt
    12721 cgcctgcagc gtcgttcgct ttagaggcaa cttctttcac catctgcgca cccatatttt
    12781 cgaacttgtc ttccagttcg atttcacgag caacggaaac accatctttg gtgatggtcg
    12841 gtgcaccgaa agatttatcc agaactacgt tacggccttt cggaccgagg gtaactttca
    12901 ctgcatctgc cagtacgttt acgccgcgca gcattttcac acgagcgtcg ttaccgaatt
    12961 ttacgtcttt agctgccatt atctttattc cttaaattcg tatgttcagt gtcgtgcgag
    13021 gattacgctt caacaattgc cagaatgtcg ctttcggaca tgatcaacac ttcttcattg
    13081 tcgatcttct cagatttcac accgtagcca tcgttgaaaa taacgatgtc gccaactttc
    13141 acatccagcg gcttcacttc gccattttca aggatacggc cattgccgac agccagcact
    13201 tcgccgcggg tggatttagc cgctgcagag ccggtcagaa cgatgccgcc agcagattta
    13261 gtttcaactt ctttacgctt gacgatcacg cgatcatgca atggacgaat attcattgat
    13321 aactctcctt tgagaaagtc cgtatctgtt atgggtgacg ccggagctta cgtggtttcc
    13381 cggctggtga ccagagaaat ggggatgagg attcgcccct tcaaggggga aaaagaaaaa
    13441 aaattctgat cagcacaaaa tcgggtgaaa accctgattc acctcacatt tcatcgcaat
    13501 ttcttcatcg ccgtcataag cgaatctgat tgtgctacca tcgaaaatct acgcagttgc
    13561 ccaaaatttg ggcgcaatcg gatatcaacc catgagtgga ctcaaacaag aactggggct
    13621 ggcccagggc attggcctgc tatcgacgtc attattaggc accggcgtgt ttgccgttcc
    13681 tgcgttagct gcacaggtag caggcaataa cagcctgtgg gcgtggcccg ttttgattat
    13741 cttagtgttc ccgattgcga ttgtgtttgc gattctgggt cgccactatc ccagcgcagg
    13801 cggtgtcgcg cacttcgtcg gtatggcgtt tggttcgcgg cttgagcgag tcaccggctg
    13861 gttgttttta tcggtcattc ccgtgggttt gccagccgcg ctacaaattg ccgccgggtt
    13921 cggccaggca atgtttggct ggcatagctg gcaactgttg ttggcagaac tcggtacgct
    13981 ggcgctggtg tggtatatcg gtactcgcgg tgccagttcc agtgctaatc tacaaaccgt
    14041 tattgccgga cttatcgtcg cgctgattgt cgctatctgg tgggcgggcg atatcaaacc
    14101 tgcgaatatc cccttcccgg cacctggtaa tatcgaactt accgggttat ttgctgcgtt
    14161 atcagtgatg ttctggtgtt ttgtcggtct ggaagcattt gcccatcttg cctcggaatt
    14221 taaaaatcca gagcgtgatt ttcctcgcgc attgatgatt ggtctgctgc tggcaggatt
    14281 agtctactgg ggctgtacgg tagtcgtctt acacttcgac gcctatggtg aaaaaatggc
    14341 ggcggcagca tcgcttccaa aaattgtagt gcaactgttc ggtgtaggag cgttatggat
    14401 tgcctgcgtg attggctatc tggcctgctt tgccagtctc aacatttata tacagagctt
    14461 cgcccgcctg gtatggtcgc aggcgcaaca taatcctgac cactacctgg cacgcctctc
    14521 ttctcgccat atcccgaata atgccctcaa tgcggtgctc ggctgctgtg tggtgagcac
    14581 tttggtgatt catgctttag agatcaatct ggacgctctt attatttatg ccaatggcat
    14641 ctttattatg atttatctgt tatgcatgct ggcaggctgt aaattattgc aaggacgtta
    14701 tcgactactg gcggtggttg gcgggctgtt atgcgttctg ttactggcaa tggtcggctg
    14761 gaaaagtctc tatgcgctga tcgtgctggc gggattatgg ctgttgctgc caaaacgaaa
    14821 aacgccggaa aatggcataa ccacataatc cggcgtttcg acattaatcc tggcgatcgt
    14881 ctttatgatc aaggcggtcg cgctcatcat cctttcgctg gtactcacca tcaaaagtat
    14941 taccgccacc ggtcccggcg ctaaaaccgc cgcctggcat acgagaaaag cgcaaatgcg
    15001 gcatcaactt cactgtcaga tgcttttgca ccggcggtaa taaaagcaga agaccgagga
    15061 agtcggtgaa aaagcccggt aataaaagca gcaaaccggc aatgatcagc gaaacacttt
    15121 taatcatctc cgccgctggg ttttcacccg ccgccatttt ttgctgcatc agcacgaaat
    15181 tcttaaagcc ctggttacgt accagtgaca tcccgataac tgacgtgaat ataaccagca
    15241 cgagggtcag caataccccc aatacatggg caacctgaat aaagattgaa atctcaatat
    15301 agacataaag gaaaatggca ataaaaggta accagcgcaa aggtttctcc tgtaatagca
    15361 gccggtaaaa cccggctacc tgaatgggtt gcgaatcgcg ttcagcttat attgtggtca
    15421 ttagcaaaat ttcaagatgt ttgcgcaact atttttggta gtaatcccaa agcggtgatc
    15481 tatttcacaa attaataatt aaggggtaaa aaccgacact taaagtgatc cagattacgg
    15541 tagaaatcct caagcagcat atgatctcgg gtattcggtc gatgcagggg ataatcgtcg
    15601 gtcgaaaaac attcgaaacc acatatattc tgtgtgttta aagcaaatca ttggcagctt
    15661 gaaaaagaag gttcacatgt caaacaacat tcgtatcgaa gaagatctgt tgggtaccag
    15721 ggaagttcca gctgatgcct actatggtgt tcacactctg agagcgattg aaaacttcta
    15781 tatcagcaac aacaaaatca gtgatattcc tgaatttgtt cgcggtatgg taatggttaa
    15841 aaaagccgca gctatggcaa acaaagagct gcaaaccatt cctaaaagtg tagcgaatgc
    15901 catcattgcc gcatgtgatg aagtcctgaa caacggaaaa tgcatggatc agttcccggt
    15961 agacgtctac cagggcggcg caggtacttc cgtaaacatg aacaccaacg aagtgctggc
    16021 caatatcggt ctggaactga tgggtcacca gaaaggtgaa tatcagtacc tgaacccgaa
    16081 cgaccatgtt aacaaatgtc agtccactaa cgacgcctac ccgaccggtt tccgtatcgc
    16141 agtttactct tccctgatta agctggtaga tgcgattaac caactgcgtg aaggctttga
    16201 acgtaaagct gtcgaattcc aggacatcct gaaaatgggt cgtacccagc tgcaggacgc
    16261 agtaccgatg accctcggtc aggaattccg cgctttcagc atcctgctga aagaagaagt
    16321 gaaaaatatc caacgtaccg ctgaactgct gctggaagtt aaccttggcg caacagcaat
    16381 cggtactggt ctgaacacgc cgaaagagta ctctccgctg gcagtgaaaa aactggctga
    16441 agtcactggc ttcccatgcg taccggctga agacctgatc gaagcgacct ctgactgcgg
    16501 cgcttatgtt atggttcacg gcgcgctgaa acgcctggct gtgaagatgt ccaaaatctg
    16561 taacgacctg cgcttgctct cttctggccc acgtgccggc ctgaacgaga tcaacctgcc
    16621 agaactgcag gcgggctctt ccatcatgcc agctaaagta aacccggttg ttccggaagt
    16681 ggttaaccag gtatgcttca aagtcatcgg taacgacacc actgttacca tggcagcaga
    16741 agcaggtcag ctgcagttga acgttatgga gccggtcatt ggccaggcca tgttcgaatc
    16801 cgttcacatt ctgaccaacg cttgctacaa cctgctggaa aaatgcatta acggcatcac
    16861 tgctaacaaa gaagtgtgcg aaggttacgt ttacaactct atcggtatcg ttacttacct
    16921 gaacccgttc atcggtcacc acaacggtga catcgtgggt aaaatctgtg ccgaaaccgg
    16981 taagagtgta cgtgaagtcg ttctggaacg cggtctgttg actgaagcgg aacttgacga
    17041 tattttctcc gtacagaatc tgatgcaccc ggcttacaaa gcaaaacgct atactgatga
    17101 aagcgaacag taatcgtaca gggtagtaca aataaagaag gcacgtcaga tgacgtgcct
    17161 tttttcttgt gagcagtaac ttaaaaacaa caatctaata tcaacttgtt aaaaaacaag
    17221 gaaggctaat atgctagttg tagaactcat catagttttg ctggcgatct tcttgggcgc
    17281 cagattgggg ggaataggta ttggttttgc aggcggattg ggggtgctgg ttcttgccgc
    17341 tattggcgtt aaacccggta acatcccgtt cgatgtcatt tccattatca tggcggttat
    17401 cgccgctatt tctgccatgc aggttgctgg cggtctggac tatctggttc atcagacaga
    17461 aaagctgctg cgccgtaacc cgaaatacat cacgatcctc gcacctatcg tgacctattt
    17521 cctgacaatc tttgctggta ctggcaacat ctctctggcg acactgccag ttatcgctga
    17581 agttgcgaag gaacaaggcg ttaaaccttg ccgtccgctc tctactgcag tggtatccgc
    17641 gcagattgcg atcaccgcat cgccaatctc agcggcagtg gtttacatgt cttccgtgat
    17701 ggaaggtcat ggcatcagct acctccatct gctctccgtg gtcatcccgt ccaccctgct
    17761 ggcggttctg gtgatgtcct ttctggtcac tatgctgttc aactccaaac tctctgacga
    17821 tccgatttat cgcaagcgtc tggaagaggg cctggttgaa ctgcgcggtg aaaagcagat
    17881 tgaaatcaaa tccggtgcaa aaacgtccgt ctggctgttc ctgctgggcg tagttggcgt
    17941 ggttatctat gcaatcatca acagcccaag catgggtctg gttgaaaaac cgctgatgaa
    18001 caccaccaac gcaatcctga tcatcatgct cagcgttgca actctgacca ccgttatctg
    18061 taaagtcgat accgacaaca tcctcaactc cagcaccttc aaagcaggta tgagcgcctg
    18121 tatttgtatc ctgggtgttg cgtggctggg cgatactttc gtttccaaca acatcgactg
    18181 gatcaaagat accgctggtg aagtgattca gggtcatccg tggctgctgg ccgtcatctt
    18241 cttctttgct tctgctctgc tgtactctca ggctgcaacc gcaaaagcac tgatgccgat
    18301 ggctctggca ctgaacgttt caccgctgac cgctgttgct tctttcgctg cggtgtctgg
    18361 tctgttcatt ctgccgacct acccgacgct ggttgctgcg gtacagatgg atgacacggg
    18421 tactacccgt atcggtaaat tcgtcttcaa ccatccgttc ttcatcccgg gtactctggg
    18481 tgttgccctg gccgtttgct tcggcttcgt gctgggtagc ttcatgctgt aatgatcaat
    18541 cgcggggcgt tcacgccccg ctttctttcc cgccgactaa catccttccc ccgtacgttg
    18601 tatagtgacc tctctcttgc ggttccatct gttcttgcga ggtgtttatg cttgatgaaa
    18661 aaagttcgaa taccgcgtct gtcgtggtgc tatgtacggc accagatgaa gcgacagccc
    18721 aggatttagc tgccaaagtg ctggcggaaa aactggcggc ctgcgcgacc ttgatccccg
    18781 gcgctacctc tctctattac tgggaaggta agctggagca agaatacgaa gtgcagatga
    18841 ttttaaaaac taccgtatct caccagcagg cactgctgga atgcctgaag tctcatcatc
    18901 catatcaaac cccggaactt ctggttttac ctgttacaca cggagacaca gattacctct
    18961 catggctcaa cgcatcttta cgctgatcct gctactttgc agcacttccg tttttgccgg
    19021 attattcgac gcgccgggac gttcacaatt tgtccccgcg gatcaagcct ttacttttga
    19081 ttttcagcaa aaccaacatg accttaatct gacctggcag atcaaagacg gttactacct
    19141 ctaccgtaaa cagatccgca ttacgccgga acacgcgaaa attgccgacg tgcagctgcc
    19201 gcaaggcgtc tggcatgaag atgagtttta cggcaaaagc gagatttacc gcgatcggct
    19261 gacgcttccc gtaaccatca accaggcgag tgcgggagcg acgttaactg tcacctacca
    19321 gggctgtgct gatgccggtt tctgttatcc gccagaaacc aaaaccgttc cgttaagcga
    19381 agtggtcgcc aacaacgcag cgtcacagcc tgtgtctgtt tcgcagcaag agcagcacac
    19441 cgcgcaattg cccttttccg cgctctgggc gttgttgatc ggtattggta tcgcctttac
    19501 gccatgcgtg ctgccaatgt acccactgat ttctggcatc gtgctgggtg gtaaacagcg
    19561 gctctccact gccagagcat tgttgctgac ctttatttat gtgcagggga tggcactgac
    19621 ttacacggcg ctgggtctgg tagttgccgc cgcagggtta cagttccagg cggcgctaca
    19681 gcacccatac gtgctcattg gcctcgccat cgtctttacc ttgctggcga tgtcaatgtt
    19741 tggcttgttt actctacaac tcccctcttc gctgcaaaca cgtctcacgt tgatgagcaa
    19801 tcgccaacag ggcggctcac ctggcggtgt gtttgttatg ggggcgattg ccggacttat
    19861 ctgttcacca tgcaccaccg caccgcttag cgcgattctg ctgtatatcg cccaaagcgg
    19921 gaacatgtgg ctgggcggcg gcacgcttta tctctatgcg ttgggcatgg gcctgccgct
    19981 gatgctaatt accgtctttg gtaaccgctt gctgccgaaa agcggcccgt ggatggaaca
    20041 agtcaaaacc gcgtttggtt ttgtgatcct cgcactgccg gtcttcctgc tggagcgagt
    20101 gattggtgat gtatggggat tacgcttgtg gtcggcgctg ggtgtcgcat tctttggctg
    20161 ggcctttatc accagcctac aggctaaacg cggctggatg cgcgtggtgc aaataatcct
    20221 gctggcagcg gcattggtta gcgtgcgccc acttcaggat tgggcatttg gtgcgacgca
    20281 taccgcgcaa actcagacgc atctcaactt tacacaaatc aaaacggtag atgagttaaa
    20341 tcaggcgctc gttgaagcca aaggcaaacc ggtgatgtta gatctttatg ccgactggtg
    20401 cgtcgcctgt aaagagtttg agaaatacac cttcagcgac ccgcaggtgc aaaaagcgtt
    20461 agcagacacg gtcttacttc aggccaacat cacggccaac gacgcacaag atgtggcgct
    20521 gttaaagcat cttaatgtcc ttggcctacc gacaattctc ttttttgacg gacaaggcca
    20581 ggagcatcca caagcacgcg tcacgggctt tatggatgct gaaaccttca gcgcacattt
    20641 gcgcgatcgc caaccgtgaa cgacacttac agcgggaaag acggaggaaa atagcgtgca
    20701 acgtgaagat gtactgggag aagccctgaa attattagaa ttacaaggga ttgccaacac
    20761 cacgctggag atggttgctg aacgtgtgga ttatccactg gacgagctac gccgcttctg
    20821 gccagacaaa gaggcaatcc tctacgatgc gctgcgttat cttagccaac agatagatgt
    20881 ctggcgtcgt cagctgatgc tggacgaaac gcaaaccgcc gaacaaaagc tgctggcacg
    20941 ttatcaggcg ttatcggagt gcgttaaaaa caaccgctat ccgggctgtc tatttatcgc
    21001 tgcctgtacg ttttatcccg atcctggcca ccctattcat caactggccg atcagcaaaa
    21061 aagcgcggcc tacgatttca cccacgaact gttaaccaca ctggaagttg acgatccggc
    21121 gatggtagca aagcagatgg aactggtgct ggaaggctgt ttaagccgaa tgctggtgaa
    21181 tcgtagccag gcggatgtcg acactgcaca tcggctggcg gaagatatcc tgcgcttcgc
    21241 ccgctgccgc cagggtggtg cattgacctg acagaaacac agaaaagaag cgatttgctg
    21301 caatcttaag cagttgaatc gcttttactg aaattaggtt gacgagatgt gcagattacg
    21361 gtttaatgcg ccccgttgcc cggatagctc agtcggtaga gcaggggatt gaaaatcccc
    21421 gtgtccttgg ttcgattccg agtccgggca ccaaattcat atcaacggac ctctacggag
    21481 gtccgttttt cgtttcagaa cgccacgatt taagcgttct gcctacaaat caattctacc
    21541 gaactcaacc agattccccc cacatcaacc ccattgtgtg ggtataattg cgggcatacc
    21601 ccagttcgac agaatttgta ccctctttaa cgcattcaga aggctgaact atggcactga
    21661 ctgacgcaaa aatccgggct gcaaagccca ctgacaaggc ttataaactc actgacgggg
    21721 ctggcatgtt cctgctggta catcctaatg gctcccgtta ctggcgtctc cgttatcgta
    21781 ttctgggtaa ggagaagact ctggcacttg gtgtgtatcc agaagtttct ctctccgaag
    21841 ctcgtacaaa acgggatgag gcccgaaaac tgatttcgga gggggttgac ccttgcgaac
    21901 agaaaagagc taaaaaagta gtccctgatt tacagctctc ttttgaacat attgcgcgac
    21961 gctggcatgc cagtaataaa caatgggcac aatcacacag cgataaagta ctcaaaagcc
    22021 tcgagactca cgttttcccc tttatcggca accgggatat cacaacactc aataccccgg
    22081 atctgcttat ccctgttcgt gctacagaag ctaaacaaat ttatgaaatc gccagtcgtc
    22141 tgcagcaaag aatatctgcc gtaatgcgtt atgccgtaca gtctggcatc atcagatata
    22201 atcctgctct ggatatggct ggcgcattga ctacggtaaa acgccagcat cgccccgctc
    22261 ttgatctttc tcgcctgcct gaacttttgt cgcgtattgg cagttacaaa gggcaacctg
    22321 tcacccagct tgccgttatg ctgaatttac tggtttttat tcgttccagt gaactcagat
    22381 acgcccgctg gtctgaaatt gatattgaca atgccatgtg gactattcca gccgaacgcg
    22441 aacccctgcc aggcgtaaaa ttctcacacc ggggctccaa gatgcgaaca ccacatcttg
    22501 tgccactcag caaacaggct gtagccatac tgacagaact acagacatgg gctggtgaaa
    22561 atggtctgat ctttacggga gcacatgacc cgcgtaaacc aatcagtgaa aatgtaatga
    22621 acgcatctca cacaattaaa cacggagcag tatgatggtt aaaagggtga aactgacagg
    22681 tgtggagcct cgcagatttc cggcatcata gtgcccaata cgggatgcat aaagctccct
    22741 cagactggag actccacaaa tgaaatatac accggttggc gttgatatcg caaaacatgt
    22801 cattcagatt cacttcatca atgagcacac aggtgaagtg gttgataaac agttgcgtag
    22861 acaggatttt ctgacgttct tcggcaaccg tgagccatgc ctg
//
LOCUS       DADMHC010000049        22838 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.049, whole genome shotgun sequence.
ACCESSION   DADMHC010000049 DADMHC010000000
VERSION     DADMHC010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22838)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22838)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22838
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.049"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..740)
                     /locus_tag="JNZ57_001594"
     CDS             complement(<1..740)
                     /locus_tag="JNZ57_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8827855.1"
                     /translation="MAMSEQTQPVAGAAASTTKARTSFGILGAISLSHLLNDMIQSLI
                     LAIYPLLQSEFSLTFMQIGMITLTFQLASSLLQPVVGYWTDKYPMPWSLPIGMCFTLS
                     GLVLLALAGSFGAVLLAAALVGTGSSVFHPESSRVARMASGGRHGLAQSIFQVGGNFG
                     SSLGPLLTAVIIAPYGKGNVAWFVLAALLAIVVLAQISRWYSAQLRMNKGKPKATIIN
                     PLPRNKVVLAVSILLILIFSKYFYMASI"
     gene            958..2610
                     /locus_tag="JNZ57_001595"
     CDS             958..2610
                     /locus_tag="JNZ57_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HAY8827856.1"
                     /translation="MKLLQRGVALALLTTFTLASETALAYEQDKTYKITVLHTNDHHG
                     HFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFR
                     GMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKR
                     QDLKIAVIGLTTDDTAKIGNPEYFTDVEFRKPADEAKLVIQELQQTEKPDIIIAATHM
                     GHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQAPVCMAAENKKQVDYVPGTPCK
                     PDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVL
                     YTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAA
                     QMDRTGAEFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAV
                     TQMKPDSGAYPQFANVSFVTKDGKLNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPR
                     LDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ"
     gene            complement(2647..3126)
                     /gene="ybaK"
                     /locus_tag="JNZ57_001596"
     CDS             complement(2647..3126)
                     /gene="ybaK"
                     /locus_tag="JNZ57_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK"
                     /protein_id="HAY8827857.1"
                     /translation="MTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQV
                     YKTLLVAVNGDMKHLAVAVTPVAGQLDLKKVAKALGAKKVEMADPMAAQRSTGYLVGG
                     ISPLGQKKRLPTIIDAPAQEFATIYVSGGKRGLDIELAAGDLAKILDAKFADIARRD"
     gene            complement(3330..4124)
                     /locus_tag="JNZ57_001597"
     CDS             complement(3330..4124)
                     /locus_tag="JNZ57_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827858.1"
                     /translation="MDLLYRVKTLWAALRGNHYTWPAIDITLPGNRHFHLIGSIHMGS
                     HDMTPLPTRLLKKLKNADALIVEADVSTSDTPFANLPTCEALEERINEEQLQNLQHIS
                     QEMGISPSLFSTQPLWQIAMVLQATQAQKLGLRAEYGIDYQLLQAAKQQHKPVIELEG
                     AENQITMLLQLPDKGLALLDDTLTHWHTNARLLQQMMSWWLNAPPQNNDITLPNTFSQ
                     SLYDVLMHQRNLAWRDKLRAMPPGRYVVAVGALHLYGEGNLPQMLR"
     gene            4262..4603
                     /locus_tag="JNZ57_001598"
     CDS             4262..4603
                     /locus_tag="JNZ57_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HAY8827859.1"
                     /translation="MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSTL
                     INNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYL
                     ARREERAKKVA"
     gene            complement(4818..7322)
                     /gene="copA"
                     /locus_tag="JNZ57_001599"
     CDS             complement(4818..7322)
                     /gene="copA"
                     /locus_tag="JNZ57_001599"
                     /EC_number="7.2.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-exporting P-type ATPase CopA"
                     /protein_id="HAY8827860.1"
                     /translation="MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVT
                     GTASAEQLIETIKQAGYDASVSHPKAKPLAESSIPSEALTAVSEALPAATADDDDSQQ
                     LLLSGMSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYG
                     AEAIEDDAKRRERQQETAVATMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNRSL
                     WLVIGLITLAVMVFAGGHFYRSAWKSLLNGAATMDTLVALGTGVAWLYSMSVNLWPQW
                     FPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTAEGEK
                     SVPLAEVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGESVHAGT
                     VVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALI
                     SAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDA
                     DALQRASTLDTVVFDKTGTLTEGKPQVVAVKTFADVDEAQALRLAAALEQGSSHPLAR
                     AILDKAGDMQLPQVNGFRTLRGLGVSGEAEGHALLLGNQALLNDQQVDTKAIEADISA
                     QASQGATPVLLAIDGKVVALLAVRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANA
                     IAKEAGIDEVIAGVLPDGKAEAIKRLQSEGRQVAMVGDGINDAPALAQADVGIAMGGG
                     SDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSIGIPVAAGILWP
                     FTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKE"
     gene            7584..8516
                     /gene="glsA"
                     /locus_tag="JNZ57_001600"
     CDS             7584..8516
                     /gene="glsA"
                     /locus_tag="JNZ57_001600"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase A"
                     /protein_id="HAY8827861.1"
                     /translation="MLDANKLQQAVDQAYTQFHSLNGGQNADYIPFLANVPGQLAAVA
                     IVTCDGNVYSAGDSDYRFALESISKVCTLALALEDVGPQAVQDKIGADPTGLPFNSVI
                     ALELHGGKPLSPLVNAGAIATTSLINAENIEQRWQRILHIQQQLAGEQVALSDEVNQS
                     EQTTNFHNRAIAWLLYSAGYLYCDAMEACDVYTRQCSTLINTVELATLGATLAAGGLN
                     PLTHKRVLQADNVPYILAEMMMEGLYGRSGDWAYRVGLPGKSGVGGGILAVVPGVMGI
                     AAFSPPLDEEGNSVRGQKMVASVAKQLGYNVFKG"
     gene            8519..9811
                     /locus_tag="JNZ57_001601"
     CDS             8519..9811
                     /locus_tag="JNZ57_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY8827862.1"
                     /translation="MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEA
                     STWVAFAFGGIVAMFSGYAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLLTL
                     AVSIAMVAHAFGAYAVQFLHEGSQEEHLILLYALGSIAVMTLFNSLSNHAVGRLEVIL
                     VGIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADK
                     VKDPQVIMPRAFLVAIGVTTLLYISLALVLLSDVSALELEKYADTAVAQAAFPLLGHV
                     GYVIVVIGALLATASAINANLFAVFNIMDNMGSERELPKLMNKSLWRQSTWGNIIVVV
                     LIMLMTAALNLGSLASVASATFLICYLAVFVVAIRLRHDIHASLPILIVGTLVMLLVI
                     VGFIYSLWSQGSRALIWIIGSLLLSLIVAMVMKRNKTV"
     gene            9936..10343
                     /locus_tag="JNZ57_001602"
     CDS             9936..10343
                     /locus_tag="JNZ57_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator CueR"
                     /protein_id="HAY8827863.1"
                     /translation="MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHL
                     NELTLLRQARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMR
                     DQLLALANACPGDDSADCPIIENLSGCCHHRAG"
     gene            complement(10344..10802)
                     /locus_tag="JNZ57_001603"
     CDS             complement(10344..10802)
                     /locus_tag="JNZ57_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415021.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HAY8827864.1"
                     /translation="MMELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGL
                     VVWLVPLGWEWQGVMFAILTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRFV
                     LESPLVNGRGHMRVGDSSWPVSASEDLGAGTHVEVIAIEGITLHIRAISS"
     gene            complement(10799..11716)
                     /locus_tag="JNZ57_001604"
     CDS             complement(10799..11716)
                     /locus_tag="JNZ57_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraslipin"
                     /protein_id="HAY8827865.1"
                     /translation="MLIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPG
                     LSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVS
                     NLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIR
                     DVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSA
                     FLQAEARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSSTNSKVVM
                     MPLEASSLMGSIAGIAELVKDSANKRTQP"
     gene            11862..12539
                     /gene="fetA"
                     /locus_tag="JNZ57_001605"
     CDS             11862..12539
                     /gene="fetA"
                     /locus_tag="JNZ57_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter ATP-binding protein FetA"
                     /protein_id="HAY8827866.1"
                     /translation="MQENSPLLQLQNVGYLAGDAKILNNINFSLRAGEFKLITGPSGC
                     GKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLI
                     FPWQIRNRQPDPAIFLDFLERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLL
                     LDEITSALDESNKHNVNEMIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQ
                     EARYELA"
     gene            12526..13305
                     /gene="fetB"
                     /locus_tag="JNZ57_001606"
     CDS             12526..13305
                     /gene="fetB"
                     /locus_tag="JNZ57_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308581.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron export ABC transporter permease subunit
                     FetB"
                     /protein_id="HAY8827867.1"
                     /translation="MNSHNITNESLALALMLVVVAILISHKEKLALEKDIFWSVGRAI
                     IQLIIVGYVLKYIFSADDASLTLLMVLFICFNAAWNAQKRSKYIAKAFISSFIAITVG
                     AGITLAVLILSGSIEFIPMQVIPIAGMIAGNAMVAVGLCYNNLGQRVISEQQQIQEKL
                     SLGATPKQASAILIRDSIRAALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQ
                     IMVTFMLLSTASLSTIIACYLTYRKFYNSRHQLVVTQLKKK"
     gene            complement(13368..14222)
                     /gene="cnoX"
                     /locus_tag="JNZ57_001607"
     CDS             complement(13368..14222)
                     /gene="cnoX"
                     /locus_tag="JNZ57_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308582.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperedoxin"
                     /protein_id="HAY8827868.1"
                     /translation="MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPI
                     LESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAI
                     RALLDKVLPREEELKAQQAMQLMQEGNYTDALPLLKDAWQLSNQNGEIGLLLAETLIA
                     LNRSEDAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAAL
                     ATQLALQLHQVGRNEEALELLFGHLRKDLTAADGQTRKTFQEILAALGTGDALASKYR
                     RQLYALLY"
     gene            complement(14283..15092)
                     /gene="ybbO"
                     /locus_tag="JNZ57_001608"
     CDS             complement(14283..15092)
                     /gene="ybbO"
                     /locus_tag="JNZ57_001608"
                     /EC_number="1.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(+)-dependent aldehyde reductase"
                     /protein_id="HAY8827869.1"
                     /translation="MTHKATEILTGKVMQKSVLITGCSSGIGLESALELKRQGFHVLA
                     GCRKPDDVERMNNMGFTGVLIDLDSPESVDRAADEVIALTDNCLYGIFNNAGFGMYGP
                     LSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYA
                     ASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARF
                     TLGPEAVVDKVRHAFISEKPKMRYPVTLVTWAVMVLKRLLPGRVMDKILQG"
     gene            complement(15082..15705)
                     /gene="tesA"
                     /locus_tag="JNZ57_001609"
     CDS             complement(15082..15705)
                     /gene="tesA"
                     /locus_tag="JNZ57_001609"
                     /EC_number="3.1.1.5"
                     /EC_number="3.1.2.14"
                     /EC_number="3.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005225520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional acyl-CoA thioesterase I/protease
                     I/lysophospholipase L1"
                     /protein_id="HAY8827870.1"
                     /translation="MNFNNVFRWHLPFLFLVLLTFRAAAADTLLILGDSLSAGYRMSA
                     SAAWPALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLR
                     GFQPQQTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVP
                     LLPFFMEEVYLKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVNHDS"
     gene            15676..16362
                     /locus_tag="JNZ57_001610"
     CDS             15676..16362
                     /locus_tag="JNZ57_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY8827871.1"
                     /translation="MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGE
                     SGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMDEEARAKLRAKHVGFVFQSFMLIPT
                     LNALENVELPALLRGESSAESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA
                     FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLR
                     LVNGQLQEEA"
     gene            16359..18776
                     /locus_tag="JNZ57_001611"
     CDS             16359..18776
                     /locus_tag="JNZ57_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY8827872.1"
                     /translation="MIARWFWREWRSPSLLIVWLALSLAVACVLALGNISDRMEKGLS
                     QQSREFMAGDRALRSSREVPQAWLEEAQKRGLKVGKQLTFATMTFAGDTPQLANVKAV
                     DDIYPMYGDLQTNPPGLKPQAGSVLLAPRLMALLNLKTGDTIDVGDATLRIAGEVIQE
                     PDSGFNPFQMAPRLMMNLADVDKTGAVQPGSRVTWRYKFGGNENQLDGYEKWLLPQLK
                     PEQRWYGLEQDEGALGRSMERSQQFLLLSALLTLLLAVAVAAVAVAMNHYCRSRYDLV
                     AILKTLGAGRAQLRKLIVDQWLMVLTLSAVTGGAIGLLFENVLMVLLKPVLPAALPPA
                     SLWPWLWALGTMTVISLLVGLRPYRLLLATQPLRVLRNDVVANVWPLKFYLPIVSMVV
                     VLLLAGLMGGSMLLWAVLAGVVVLALLCGVLGWMQLNVLRRMTLKSLPLRLAVSRLLR
                     QPWSTLSQLSAFSLSFMLLALLLVLRGDLLDRWQQLPPESPNYFLINIATEQVAPLKA
                     FLAEHHIVPESFYPVVRARLTAINDKPTEGNEDEALNRELNLTWQNTRPDHNPIVAGN
                     WPPKADEVSMEEGLAKRLNVALGDTVTFMGDTQEFRAKVTSLRKVDWESLRPNFYFIF
                     PEGALDGQPQSWLTSFRWENGNGMLTQLNRQFPTISLLDIGAILKQVGQVLEQVSRAL
                     EVMVVLVTACGMLLLLAQVQVGMRQRHQELVVWRTLGAGKKLLRTTLWCEFAMLGFVS
                     GLVAAIGAETALAVLQAKVFDFPWEPDWRLWIVLPCSGALLLSLFGGWLGARLVKGKA
                     LFRQFAG"
     gene            19205..22838
                     /locus_tag="JNZ57_001612"
                     /pseudo
     CDS             19205..22838
                     /locus_tag="JNZ57_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415030.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
BASE COUNT         5256 a         5987 c         6464 g         5131 t
ORIGIN      
        1 ctgatgctcg ccatatagaa atatttcgag aaaatgagga ttaacagaat gctgactgcc
       61 agtaccactt tgttgcgcgg cagtggattg attatcgtcg ctttgggttt tcctttattc
      121 attcggagct gtgccgagta ccaacggcta atttgcgcca acaccacgat cgccagcagt
      181 gccgcaagca caaaccaggc aacgttgcct ttgccataag gcgcgataat caccgccgtc
      241 agcaagggtc ccagggaact gccaaagttg ccgccgacct gaaagataga ttgcgccagg
      301 ccatgccgcc cgccggaagc catacgggct acgcgagaag attccggatg aaagaccgat
      361 gaaccggtac cgaccagcgc cgccgccagc agaactgcgc caaaactgcc cgccagcgca
      421 agcagcacca gaccacttaa ggtaaagcac atgccaattg gcaacgacca cggcatcgga
      481 tatttatcgg tccagtagcc gaccactggt tgcagtagcg aagaggcgag ctggaaggtg
      541 agggttatca tgccaatctg cataaatgtc agagaaaatt ctgactgaag cagaggataa
      601 atcgccagaa tcagcgattg gatcatgtcg ttcagcagat gtgagaggct gatagcacct
      661 aaaataccaa acgatgttcg ggccttggtc gttgacgcag ccgcgcccgc cacaggctgg
      721 gtttgttcac tcattgccat aggaaagtca ctttttcagg gttgcgatgt aaagaatgat
      781 cttatttgtg attattaccc gactaacata cctgtatgcg tcgcctgaag gaagtctcaa
      841 cgccgaatac agaatttcta atctggatgc agatttatct tcaccggacg cagacttgtc
      901 tatgatgttg cgtcatacta tttttcaaca cgttgaaatc aggtcaggga gagaagtatg
      961 aaattattgc agcggggcgt ggcgttagcg ctgttaacca catttacact ggcgagtgaa
     1021 actgctctgg cgtatgagca ggataaaacc tacaaaatta cagttctgca taccaatgat
     1081 catcatgggc atttttggcg caatgaatat ggcgaatatg gtctggcggc gcaaaaaacg
     1141 ctggtggatg gtatccgcaa agaggttgcg gctgaaggcg gtagcgtgct gctactttcc
     1201 ggtggcgaca ttaacactgg cgtgcccgag tctgacttac aggatgccga acctgatttt
     1261 cgcggtatga atctggtggg ctatgacgcg atggcgatcg gtaatcatga atttgataat
     1321 ccgctcaccg tattacgcca gcaggaaaag tgggccaagt tcccgttgct ttccgcgaat
     1381 atctatcaga aaagtaccgg cgagcgcctg tttaaaccat gggcgctgtt taagcgtcag
     1441 gatctgaaaa ttgccgtcat tgggctgaca accgatgaca cagcaaaaat tggtaacccg
     1501 gaatacttca ctgatgtcga atttcgtaag cccgccgatg aagcgaagct ggtgattcag
     1561 gagctgcaac agacagaaaa gccagacatt attatcgcgg cgacccatat ggggcattac
     1621 gataatggtg agcacggctc taacgcaccg ggcgatgtgg agatggcacg cgcgctgcct
     1681 gccggatcgc tggcgatgat cgtcggtggt cactcgcaag ctccggtctg catggcggca
     1741 gaaaacaaaa aacaggtcga ttacgtgccg ggtacgccat gcaaaccaga tcaacaaaac
     1801 ggcatctgga ttgtgcaggc gcatgagtgg ggcaaatacg tgggacgggc tgattttgag
     1861 tttcgtaatg gcgaaatgaa aatggttaac taccagctga ttccggtgaa cctgaagaag
     1921 aaagtgacct gggaagacgg gaaaagcgag cgcgtgcttt acactcctga aatcgctgag
     1981 aaccagcaaa tgatctcgct gttatcgccg ttccagaaca aaggcaaagc gcagttggaa
     2041 gtgaaaatag gcgaaaccaa tggtcgtctg gaaggcgatc gtgacaaagt gcgttttgta
     2101 cagaccaata tggggcggtt gattctggca gcccaaatgg atcgcactgg tgccgaattt
     2161 gcggtgatga gtggaggagg aattcgtgat tctatcgaag caggcgatat cagctataaa
     2221 aacgtactga aagtgcagcc attcggcaat gtggtggtgt atgccgacat gaccggtaaa
     2281 gaggtgattg attacctgac cgccgtcaca caaatgaagc cagattcagg tgcctacccg
     2341 caatttgcca acgttagctt tgtgacgaaa gacggcaaac tcaacgacct gaaaatcaaa
     2401 ggcgaaccgg tcgatccggc gaaaacttac cgtatggcga cattaaactt caatgccacc
     2461 ggcggtgatg gctatccgcg ccttgataac aaaccgggct atgtgaatac cggctttatt
     2521 gatgccgaag tgctgaaagc gtatatccag aaaagctcgc cgctggatgt gagtgtttat
     2581 gaaccgaaag gtgaggtgag ctggcagtaa tccgaaagtg ccggatattt gcatccggca
     2641 caatgcttaa tcgcggcggg cgatatcagc aaatttggca tcgaggatct tcgccagatc
     2701 gcctgccgcc agttcgatat ccagtccgcg cttgccgcca gaaacataaa tagtggcaaa
     2761 ttcttgtgcg ggggcgtcga taatcgtcgg cagacgtttt ttctgcccca gtgggctaat
     2821 ccccccaacc aggtatcccg tcgaacgctg cgcggccatc ggatcggcca tctcaacttt
     2881 cttggcaccc agcgcttttg ctactttttt aagatccagt tgacctgcga ccggcgtaac
     2941 ggccactgcc agatgtttca tatcaccgtt cactgccacc agtagcgttt tgtagacttg
     3001 atccggattc aaacctaatt ttttgacgac ttcatcgcca aaattggttt cagccggatc
     3061 gtgctcgtag gtatggattt gaaacgaaat cttgtttttt tcgagtaatt taactgcggg
     3121 tgtcatggta attttcctgc cttaaacaaa aaaacgaagc aagcatacgc ctgatggtgg
     3181 tccaaaaaaa agagtcatct tgcctaagag tattggcagg atggtgagat tgagcgacaa
     3241 tcgagttaca ccgtcgctta aagtgacggc ataataataa aaaaatgaaa ttcctctttg
     3301 acgggccaat agcgatattg gccatttttt tagcgcaaca tttgcggcaa attcccttct
     3361 ccatacaggt gtagtgcacc gaccgcgacc acatatcgcc ccggcggcat ggcgcgtaat
     3421 ttatcccgcc aggcgagatt tcgctgatgc atcagcacat cgtacagcga ctgactgaac
     3481 gtattgggca gcgttatatc attattttgc ggaggtgcat tcagccacca gctcatcatt
     3541 tgttgcagca accgtgcgtt ggtatgccag tgggtcagcg tatcgtccag cagcgccagt
     3601 cctttgtcag ggagctggag caacatggta atctggtttt cagccccttc cagttcaatc
     3661 acgggtttat gttgttgctt cgccgcctgc aataactggt aatcgatacc gtattctgcc
     3721 cgcagcccca gtttttgtgc ctgcgtcgcc tgaagaacca tcgcgatttg ccacagcggt
     3781 tgagtagaaa agagcgacgg agaaatgccc atctcctggc taatgtgctg cagattttgg
     3841 agttgctcct cgttaatgcg ctcttccagc gcctcgcaag taggcaaatt agcaaaaggc
     3901 gtatcgctgg tggaaacatc cgcctcgacg atcagcgcat cggcgttttt gagctttttg
     3961 agcaaacggg tgggcagggg agtcatatcg tggctaccca tatgaatact gccaatcaga
     4021 tgaaaatggc gattgccggg aagggtgata tcgatggcag gccaggtgta atgattaccg
     4081 cgcagcgcgg cccaaagcgt ttttacccgg tacaacagat ccatacgacc tccctttgtg
     4141 aaatatcatg ctagcgcgcg gtgagggatg gcgcaaatgg agttggggac ttgtttaatg
     4201 tgtttgtatg attcagtatg ttcttgcatc gctattcaca gggaagcaac agttaaaaac
     4261 catgaaacag gcaacaagaa aaccgacgac acccggagat attcttctct atgaatatct
     4321 ggaaccgctc gatttgaaaa tcaatgagtt agcagagttg ctgcatgttc atcgtaatag
     4381 cgtcagtaca ctgatcaata ataatcgtaa actcaccact gagatggcat tccgtctggc
     4441 gaaagttttt gataccacag tcgatttttg gctaaacctc caggcggcag ttgatctttg
     4501 ggaagttgaa aacaacatgc gcacccagga agaattggga cggattgaaa cagtggctga
     4561 atatttggca cgccgtgaag agcgtgcaaa aaaggtcgcg taaggccaaa acatcgcttc
     4621 atctcgtagg ccggataagg cgttcacgcc gcatccggca tccgagcacc attgcctgat
     4681 gcgacgctta cccgtcttat caggcctaca aacctgtgcc tgaaccgtag gccggataag
     4741 gcgtttacgc cgcatccggc agtcatgcgt cgatgccaaa tgcgccgccc taaagcagcg
     4801 catccgcaat gacgtactta ttccttcggt ttaaaccgca gcaaccggtt ggcgttactc
     4861 actacggtaa tcgacgagag cgccattgcc gctccggcaa ctaccgggtt aagcagtgtt
     4921 ccagtaaacg gccacaaaat accagcggcg accggaatac caatgctgtt gtagataaac
     4981 gcaccgagca ggttctgctt catattgcgc agcgttgcgc gggaaatcgc gagcgcatct
     5041 gcaacaccca tcaggctatg gcgcatcagg gtaatcgccg cggtttcaat ggcaacatca
     5101 ctgccgccac ccatcgcaat accgacatcc gcctgagcca gcgctggcgc gtcgttaatg
     5161 ccgtcgccca ccattgccac ctgacgtcct tcactttgca gacgtttgat cgcttcggct
     5221 ttaccgtctg gcagcacccc ggcgatcacc tcatcaatcc ctgcttcttt ggcgatcgca
     5281 ttggcggtgg ttgggttatc cccggtcaac atcaccagac gatatcccgc tttatgcagg
     5341 cgttgcagcg ccgccacgct atcactacgc aacggatcgc gtacagccag cagggctact
     5401 actttcccgt caatcgccag cagcacaggc gttgctcctt gcgatgcctg agctgaaata
     5461 tcggcttcaa tcgctttagt atcgacttgc tggtcattta acagcgcctg attacccagc
     5521 aataacgcat gaccttcagc ttcaccgctt acgcccagcc cgcgcaatgt gcggaaaccg
     5581 ttgacctgcg gcagctgcat atcgcctgct ttatcgagga tcgctcgtgc cagcggatgg
     5641 ctggaacctt gctccagcgc cgccgccaga cgcaatgctt gcgcttcatc aacatcagca
     5701 aatgttttta ctgcgacaac ctgcggcttc ccttcggtca gcgtcccggt tttatcgaac
     5761 acgacggtat cgagtgtact ggcgcgttgc agcgcgtcgg cgtcccgcac cagcacgcca
     5821 aactcagccg cccgcccgac gccggaaata atcgacattg gcgtcgccag ccccagcgca
     5881 cacggacagg caataatcag caccgtggtg gctatcacca gggtatagac aatctgcggt
     5941 gccggaccaa agaaatacca gattgctgca ctgatcagcg caatcaccac tactaccggc
     6001 acaaatacgg ctgagatttt atccgccagc tgaccgattt ctggcttgct gctctgggcc
     6061 tggcgcacca tgcgaataat ccttgacagc gtggtatggc tgccaaccgc actggcgcga
     6121 aatagcacgc taccgtcctg taccactgtc ccggcatgga cgctttcgcc ttcgcctttt
     6181 tgctgcggga ttggttcgcc cgtcagcatc gcttcatcca gccatgcttc gccctgggta
     6241 atctcgccat ctaccggcac gcgatcgccg gtcgtcaggc gcagtaacat ccctggctga
     6301 acttccgcca gcggcacgct tttttcaccc tctgcggtga ccactcgcgc cgtcggtggg
     6361 gttaaatcga gtaatttctc cagcgcctta gaagaacgct gacgcgcgcg cgcttccagc
     6421 atatggccga gattaatcag accgataatc atcgcactgg cttcatagta aagatgccgc
     6481 gcttccatcg ggaaccactg cggccacagg ttgacgctca tcgaatagag ccacgccaca
     6541 cccgtaccca gcgccaccag cgtatccatc gtcgccgcac cgttcagcag gcttttccac
     6601 gcgctgcggt aaaaatgccc gccggcgaaa accattaccg ccagggttat caggccgata
     6661 actaaccaca ggctgcggtt gtcagcggtg accatcatgt tatcgccgat catcccccag
     6721 accattaccg gaatacccac cgccagtgcg acaatcgcct gccagcggaa gcgcttcatc
     6781 gtagcgacgg cggtttcctg ctggcgctcg cggcgtttcg cgtcatcttc aatcgcttcc
     6841 gcgccgtagc ccgctttttc caccgcctgc actaaatctt gtggggaggc actgcccatc
     6901 accagcgcag tacgctccgc caggtttacc cgtgcctgag tgacgcccgg tacgctttgc
     6961 agcgcatttt gtacgcgggt gacacagctg gcgcagctca tgccgctcag cagcaactgc
     7021 tggctgtcat cgtcatcggc ggtcgctgcc ggaagcgcct cagaaaccgc tgtcagtgct
     7081 tccgacggga ttgatgactc cgccagcggt ttagcctttg ggtggcttac agatgcgtca
     7141 taacccgctt gtttgatggt ttcgatcagc tgttctgcac tggcagtccc ggtaacgtgc
     7201 gcttcagtga tagacacatc cgcttgttcc acatccgggc gctgttcgag actttctttc
     7261 acgcgtttaa cgcagtgacc gcaggacagg ccgtccaggg tcaggtcgat agtttgtgac
     7321 ataaaacact cctttaagac agttttgact ggctgtgata aaggttaaac cttccagcaa
     7381 ggggaaggtc aagaaattaa taaaccaggc gggtaaaagt ccgtaaagat taaaaaatcg
     7441 gctcgatttg catcaggatt agacatttat ttctttgttt tcctgtagtt aagttgctgg
     7501 tgctaagtta aatcaggatg cctgaaaatc ggcaccgggg tgaggaatta cctcccgcat
     7561 ctataaaaag gagttaacaa aagatgttag atgcaaacaa attacagcag gcagtggatc
     7621 aggcttacac ccaatttcac tcacttaacg gcggacaaaa tgccgattac attccctttc
     7681 tggcgaatgt accaggtcaa ctggcggcag tggctatcgt gacctgcgat ggcaacgtct
     7741 atagtgcggg tgacagtgat taccgctttg cactggaatc catctcgaaa gtctgtacgt
     7801 tagcccttgc gttagaagat gtcggcccgc aggcggtaca ggacaaaatt ggcgctgacc
     7861 cgaccggatt gccctttaac tcagttatcg ccttagagtt gcatggcggc aaaccgcttt
     7921 cgccactggt aaatgctggc gctattgcca ccaccagcct gattaacgct gaaaatattg
     7981 aacaacgctg gcagcgaatt ttacatatcc aacagcaact ggctggtgag caggtagcgc
     8041 tctctgacga agtcaaccag tcggaacaaa caaccaactt ccataaccgg gccatagcct
     8101 ggctgctgta ctccgccgga tatctctatt gtgatgcaat ggaagcctgt gacgtgtaca
     8161 cccgtcagtg ctccacgctc atcaatactg ttgaactggc aacgcttggc gcgacgctgg
     8221 cggcgggtgg tctgaatcca ctgacgcata aacgcgttct tcaggccgac aacgtgccgt
     8281 acattctggc cgaaatgatg atggaagggc tgtatggtcg ctccggtgac tgggcgtatc
     8341 gcgttggttt accgggcaaa agcggtgtag gtggcggtat tctggcggtc gtccctggcg
     8401 tgatgggaat tgccgcgttc tcaccaccgc tggacgaaga aggtaacagt gttcgcggtc
     8461 aaaaaatggt ggcatcggtc gctaagcaac tcggctataa cgtgtttaag ggctgatcat
     8521 gatgaacacg gaaggtaata acggtaacaa acccctcggt ctatggaatg tcgtttccat
     8581 cggtattggg gcaatggtgg gggcggggat cttcgcgctg ctggggcagg ctgcgttgct
     8641 aatggaagcc tcgacctggg tcgcctttgc ttttggcggt attgtggcga tgttttccgg
     8701 ttatgcctat gcgcgtctgg gggcgagcta tcccagtaat ggcggcatta tcgacttctt
     8761 tcgtcgcgga ttaggcaacg gcgtcttttc gctggcgctc tcgttactgt acctgttgac
     8821 gctggcggtg agcatcgcca tggtcgccca tgcttttggc gcttatgccg tgcagttttt
     8881 gcatgaaggc agccaggagg agcaccttat tttgctctac gcgttgggga gcattgcggt
     8941 gatgacgctt ttcaactcct taagcaacca tgcggtaggg cggctggaag tgatcctcgt
     9001 cggcattaaa atgatgatcc tgttattgct gattattgcc ggtgtctggt cgctgcaacc
     9061 agcgcatatt tccgtctctg cgccccccag ctccggtgcg ttcttctcct gtattgggat
     9121 aactttcctt gcctatgcgg gctttggcat gatggcgaac gcggcggata aagtgaaaga
     9181 tccgcaggtc attatgccac gggcgtttct ggtggcgatt ggcgttacca cgttgcttta
     9241 tatctcgctg gcactggttt tgcttagcga tgtatcggca ttagagttag aaaaatatgc
     9301 cgataccgcc gtagcgcagg ctgcttttcc gctgctcgga catgtgggtt atgtgatcgt
     9361 cgtcatcggc gctttactgg cgacggcttc agccattaac gcgaacctgt tcgccgtgtt
     9421 taacatcatg gacaacatgg gcagcgaacg cgaactgccg aagctaatga ataaatccct
     9481 gtggcggcag agtacctggg gcaacatcat tgtcgtggtg ttgattatgc tgatgacggc
     9541 ggcactgaat ttaggctcac tcgccagcgt tgccagcgcc acctttttga tttgctacct
     9601 ggcggtgttt gtggtggcga tccgcctgcg tcatgatatt cacgcctcgt tgccgattct
     9661 tatcgttggt acgttggtga tgttgttggt gatcgttggc tttatctaca gtctgtggtc
     9721 ccagggtagc cgtgcgttga tatggattat tggctcactc ttactcagcc ttattgtggc
     9781 aatggtcatg aagcgcaata aaaccgtata acatctctct gtgcgcagta cttcctgtat
     9841 tattgtggtg gcggtcgata ttcgcactgg caaaaaaacg tgcttgaata tctgttgaaa
     9901 ccctttaaca aagcacagga ggcgttgcgc gaacgatgaa catcagcgat gtagcaaaaa
     9961 ttaccggcct gactagcaaa gccattcgct tctatgaaga gaaggggctg gtgacgccgc
    10021 cgatgcgcag cgaaaacggt tatcgcacct acacgcagca gcatctcaac gaactgacct
    10081 tactgcgcca ggcacggcag gtgggcttta acctggaaga gagcggcgag ctggtgaatc
    10141 tgtttaacga cccgcagcgg cacagcgccg acgtcaaacg gcgcacgctg gagaaggtgg
    10201 cggagatcga acgacacatt gaggagctgc aatccatgcg cgaccagctg ctggcactgg
    10261 cgaatgcctg ccctggcgat gacagcgccg actgcccgat tatcgaaaat ctctccggct
    10321 gctgtcatca tcgggcaggg tgattaagac gagatggctc ggatatgtag ggttatccct
    10381 tctatcgcaa tgacttcaac atgcgtacct gcaccgagat cctcgctggc gctgacaggc
    10441 catgaactgt caccgacgcg catatgaccg cgcccgttga ccagcggaga ttccagcaca
    10501 aaacgtcggc caatcagctg ctgcccgcgc tggtttaaat gactatcgct gtgcttttgt
    10561 tcgcgcaccc gccgcgacaa ccatttccac cacagccagg cggcgagcag cgtcaggatg
    10621 gcaaacatta ccccttgcca ctcccaaccc agcggcacca gccagaccac caggccggta
    10681 atcaccgctg ccacgccgct ccacaacaaa taaccatttc cgcccagcat ctcggctgcc
    10741 agcagcaaac cgccgagact gagccagaaa atatgtggat gaacgaccat taactccatc
    10801 atggctgagt ccgtttgttg gcgctgtctt tcaccagttc ggcaatcccg gcaatcgacc
    10861 ccatcaggct gctggcctct aatggcatca tcactacttt gctgttagtg gaggaaccga
    10921 tctgctgtaa cgcttcggtg tatttctgcg ctacgaagta gttcaccgcc tgaatatcac
    10981 cggaggcgat agcttcagac accattttgg tggcgcgggc ttctgcttcg gcggaacgtt
    11041 cacgcgcttc agcctgtaaa aacgccgact gacgttcgcc ttccgctttc aggatttgcg
    11101 actgtttttc accttcggct ttgaggattt ccgcctgacg gatcccttcc gcttcaagaa
    11161 tgtaagcgcg tttggtacgt tccgctttca tctgcgcgtt cattgaagag ataagctctg
    11221 ccggtgggcg cacgtcgcga atttcaatac gggtgacttt aatcccccac gggttggtgg
    11281 cttcatcgac aatacgcagc aggcgtgagt tgatgctgtc gcgctgagag agcatttcgt
    11341 caagttccat tgaacccaac acggtacgga tgttagtcat ggtcaggttg atgatcgcca
    11401 gctccagatt gctgacttca taggcagcgc gtggcgcgtc aatcacctga ataaaacaga
    11461 ctgcgtcgat ggtaacgttg gcgttatctt tcgagataac ttcctgggaa gggatatcga
    11521 gcacttgctc catcatattg atcttgcgac caatgcgatc cataaacggc accaccagac
    11581 tgagccccgg ctgtaacgtt ttggtatagc gaccaaaacg ttctaccgtc cattgatagc
    11641 cctgcggcac gattttgacg cccgcgccga caatgaccag cgcgacaaaa atgagaatcg
    11701 ggataaagat aagcatcgga aaaacctcct gttgtaccgt ccataatcag caaaattgct
    11761 gctcgattaa acaaattata cctgattact gaaagagagt tcccccttat tcctgcgaag
    11821 gataaactgt ttttagtaaa aatcagaaaa agggaacagc gatgcaggaa aatagtcctt
    11881 tgcttcagct acaaaacgta ggatatctgg cgggtgatgc gaagattctt aataacatca
    11941 atttttcgct gcgtgctggc gaatttaagt taattaccgg tccttctggt tgtggcaaaa
    12001 gtacgttgct aaaaatagtt gcttcattga tcagcccaac cagcggaacg ttactgtttg
    12061 aaggtgagga tgtcagcaca ctaaagccag aaatctaccg ccaacaagtc tcttactgcg
    12121 cccagacacc gacgctgttt ggcgatacgg tatacgataa tctgatcttt ccctggcaga
    12181 tccgtaaccg gcagcctgac ccagccattt ttctcgattt tctcgaacgc ttcgccttgc
    12241 cggacagcat tttgacgaaa aatatcgccg agctatctgg tggtgaaaaa caacgcatct
    12301 cactgattcg taacctgcaa tttatgccga aggttttatt gctggatgaa atcaccagtg
    12361 cgctggatga aagtaataaa cataacgtta atgagatgat ccatcgttat gtgcgcgagc
    12421 aaaatattgc cgtgctgtgg gtgacacacg ataaagacga aattaatcat gcggataaag
    12481 tgattacact gcaaccgcat gccggagaaa tgcaggaagc acgctatgaa ctcgcataat
    12541 attactaacg aatcattggc actggcatta atgctggtgg tggtggcaat cttaattagc
    12601 cataaagaaa aactggcgct ggagaaagat attttctgga gcgtcgggcg cgcgataatt
    12661 cagctgatta ttgtcggcta tgtgctgaag tatattttca gcgcggatga tgccagcctg
    12721 acattattga tggtgttatt tatctgcttt aatgcggcgt ggaacgcgca aaaacgcagt
    12781 aaatatattg ctaaagcttt tatctcatcg tttattgcca ttacggtcgg ggcgggaatt
    12841 accctggcgg tgctgattct ctcagggtcg attgaattta tcccgatgca ggtgatccct
    12901 atcgccggga tgattgccgg taacgccatg gtagcggtgg ggttgtgtta caacaattta
    12961 gggcaacggg tcattagcga acagcaacag attcaggaga aactgagtct tggcgcgacg
    13021 ccgaagcagg cttcagcgat attgattcgc gacagtattc gcgcggcttt aattccgacg
    13081 gtcgattcag caaaaacggt tggcttagtg agtttaccag gaatgatgtc cgggctgata
    13141 tttgccggga ttgatccggt gaaggcgatt aaatatcaga ttatggtgac ctttatgctg
    13201 ctctcaaccg ccagcttgtc gaccattatt gcctgctatt taacctatcg taagttttat
    13261 aattcgcgcc accagttggt ggtgacgcaa ttgaagaaga aatgatgcga tgccggatgc
    13321 gcagcatcgc atccggcgtt gtggttcatg tgccgaacaa cggaatatca atacaacaat
    13381 gcatacagct ggcggcgata cttcgacgcc agtgcatcac ccgtacccag cgcagcgagg
    13441 atctcctgga acgttttacg cgtctgaccg tctgcggcgg tgagatcttt acgcagatgc
    13501 ccgaacagca actccagcgc ctcttcattg cgcccaacct gatgcagttg cagcgccagt
    13561 tgcgtcgcca gtgcggcatc ttctggattc tccgccacct gctgttgcaa ctgttgaatt
    13621 tccggcgtat cagccgcctg cttcagcagt tcgatttgcg ccaccagccc ctggtagcgg
    13681 gtgtcctgat cctgcaacgg aatggttttc agcaccgctt ccgcatcttc agaacggttc
    13741 agcgcaatca gcgtttctgc cagcagcagg ccgatctccc cgttctgatt cgacaactgc
    13801 caggcgtctt tcagcaatgg cagggcatcg gtgtaattgc cttcctgcat cagttgcatc
    13861 gcctgctgcg ctttcagctc ttcttcgcgc ggcagcactt tatccagcag ggcgcggatc
    13921 gcctcttccg gttgcggccc ctggaagcca tctaccggtt gcccgttctg gaacagatac
    13981 acggtcggaa tcgcgcgcag accaaactgg gcggcaatca tctgctccgc gtcgcagtcc
    14041 agcttcgcca gaataaattg cccgttgtac tgcgccgcga ggctttccag gatcggggtt
    14101 aactgcaaac agtgctggct acgttcagac caaaaataga acagcaccgg agtggtcatc
    14161 gactgttcaa gaacctgttg caggttagat tcgttaatgt tgacaatatt ttctacggac
    14221 atggagtcgc tctctgttgt cgatattttc tttgacatgg gggcttaagc gcgcgcttca
    14281 actcacccct gcaatatttt gtccatcacg cgcccaggca gcaggcgctt gagcaccatt
    14341 actgcccagg tcaccagcgt taccggatag cgcatcttcg gcttctcgct aataaaagca
    14401 tggcgcactt tgtcgaccac cgcttccggt cccaacgtaa agcgggcggc gatgccggga
    14461 ttttcgactg gtttatcact ttgcgtctgg ttgacgttgt cggtgaagcg agtacgaatg
    14521 ggaccgggtt cgatcaggct gactttaatt ccgctgtggc gtagctccat gcgcagcgcg
    14581 tctgaccacg cctccagcgc atatttactg gccgcgtaag cgccacgacc cggcgtggag
    14641 attaatccca tcaccgatga tgtcatcaca atacgccctt caccgtgcgg taacatcgcg
    14701 ggtaacaggc gcatggtgag ctggtgtgcg ccgaaaaagt tggcggaaaa ctgctgttcc
    14761 atctgcgcac ggctgatggt ggaaaggggg ccatacatgc cgaatccggc attgttaaag
    14821 atcccataca gacaattatc ggtcagggcg atcacctcgt ctgctgcgcg atcaacactt
    14881 tctggtgaat ccagatcgat caacacgccg gtaaatccca tgttgttcat acgctcaaca
    14941 tcatccggtt ttcggcaacc tgccagcaca tgaaaaccct ggcgttttaa ttcgagtgcg
    15001 ctttccaggc caattccact ggaacatccg gtaattaaga ccgatttttg cataacttta
    15061 cctgtcagga tctccgttgc tttatgagtc atgatttact aaaggctgca actgcttcgc
    15121 catccagtcg gcaataaacg gctgggcgtc gcggttggga tgaataccgt catcctgcat
    15181 ccattgtggc ttgaggtaga cctcttccat aaaaaagggc agcagcggaa catcaaactc
    15241 tttggcgagt ttggggtaaa tggcgctaaa ggcttcatta taacggcgac catagtttgc
    15301 aggcagacgt atttgcatta acaatggttc agcgttggcg gctttgacat cctgcaaaat
    15361 ctggcgcagc gtttgctcgg tttgctgtgg ctgaaaacca cgcaaaccgt cattgccgcc
    15421 cagttcaacc agcacccagc gcggctgatg ctgtttcagc agagccggaa ggcgcgccag
    15481 tccttgttgc gaggtgtcgc cgctgatgct ggcattaact accgacgttt tactctgcca
    15541 cttatcattc aacaaggcag gccaggccgc gctggcagac attcgatacc cggcgctcag
    15601 gctatcaccc agaatcaata acgtgtccgc tgcggcggca cggaaggtta acaggaccag
    15661 gaacaggaag ggcaaatgcc agcggaaaac attgttgaag ttcatcatct taagaagtcc
    15721 gtcggtcagg gggagcatga actctccatc ctcaccggag ttgagctggt tgtcaaacgt
    15781 ggcgagacca tcgcactggt gggcgagtcg ggatcgggta agtcaacctt gctggcgatc
    15841 ctcgccgggc ttgatgacgg cagcagtggc gaagtgagtc tggtgggaca accgctacat
    15901 aatatggacg aagaagcgcg ggcaaagttg cgcgcgaagc acgtcggctt tgtttttcag
    15961 tcatttatgt taattcctac ccttaacgcg ctggaaaacg tcgagcttcc ggctctgctg
    16021 cgcggtgaga gtagcgcgga aagtcgtaac ggggcgaaag cgttgctcga acagttaggg
    16081 ctgggtaaac gtctggatca tcttccggca cagctttccg gcggtgaaca gcaacgagtg
    16141 gcgctggcac gagcctttaa tggtcgacct gatgtgctgt ttgccgacga acccaccggc
    16201 aaccttgacc gccagacggg cgataaaatt gccgacctgc tgttttccct caaccgtgaa
    16261 catggcacca cgttgattat ggtgacccac gacctgcaac tggcggcacg ctgcgaccgc
    16321 tgcttacggc tggtgaacgg gcagttgcag gaggaagcat gattgcacgt tggttctggc
    16381 gcgaatggcg ttcgccgtcg ctattaattg tctggctggc gctaagcctg gcggtggcct
    16441 gcgtgctggc gctgggcaat atcagcgatc gcatggagaa gggcttaagc cagcaaagcc
    16501 gtgagtttat ggcgggcgat cgggcgttgc gcagttcacg cgaagtgccg caagcgtggc
    16561 tggaggaagc gcaaaagcgc ggcctgaaag tcggcaagca gctgactttc gccacaatga
    16621 cctttgcagg cgacacaccg cagctggcga acgtcaaagc ggtggatgat atctacccga
    16681 tgtatggcga tctgcaaact aatccccctg gcctgaaacc gcaggcgggc agcgtattgc
    16741 tggccccacg cctgatggca ctgcttaacc tgaaaacggg cgacaccatt gacgtgggcg
    16801 atgccacctt gcggattgcc ggagaagtga ttcaggaacc ggattccggt tttaacccct
    16861 tccagatggc tccgcgtctg atgatgaatc tggcggatgt cgataaaacc ggagccgtgc
    16921 agccggggag tcgggtcacc tggcgttata aattcggcgg caacgagaac cagctcgacg
    16981 gctatgagaa atggttgtta cctcagctta aacccgaaca acgctggtac ggtctggaac
    17041 aggacgaagg cgcgctgggg cgatcgatgg aacgctcgca acagttcctg ctgctttcgg
    17101 cgcttctgac cttgctgctg gcagtggcag tggcagcggt ggcggtagcg atgaatcatt
    17161 actgtcgcag tcgctacgat ctggtggcga tcctcaaaac gctgggggca gggcgagcgc
    17221 aactgcgtaa gctaatcgtc gatcagtggt tgatggtgct gacgctttca gccgttaccg
    17281 gtggggccat aggcctgttg ttcgaaaacg tgttgatggt gctgctcaag cccgttctgc
    17341 ctgctgcact accgccagcc agcctctggc cgtggctgtg ggcgcttggc accatgacgg
    17401 tcatctcgct gctggtgggg ctacgaccat accgcttgtt gctggcaacg cagcctttac
    17461 gcgtattacg taatgatgtg gtagcgaacg tctggccgct gaagttttat ctgccgattg
    17521 tcagtatggt ggttgtgctg ctgctcgccg gattaatggg tggcagcatg ctgctttggg
    17581 cggtgctggc gggcgtggta gtactggctt tgctgtgcgg tgtgctgggc tggatgcagc
    17641 tgaatgtact tcgccgcatg acgctgaaat cgctacctct gcgcctggcg gttagccgcc
    17701 tgttacgtca gccgtggtca acgttaagcc agctttcggc attttcgctc tcctttatgc
    17761 tgctggcgct gttgctggta ttgcgtggcg atctgctcga ccgctggcag cagctaccgc
    17821 cagaaagccc gaactacttt ttaattaaca tcgccacaga acaggtagca ccgctaaaag
    17881 cgttcctcgc ggaacatcat atagtcccgg aatcatttta tccggtagtg cgggcgcggc
    17941 tgacggcgat taacgataag ccgacagaag gtaatgaaga tgaggcgctt aatcgcgaac
    18001 tcaatcttac ctggcaaaat acgcggcccg atcataatcc gattgtcgcc ggtaactggc
    18061 cgccaaaagc cgatgaagtg tcgatggaag aggggctggc gaaacgctta aacgttgccc
    18121 tcggtgatac cgtgactttt atgggcgata cccaggagtt ccgcgctaaa gtgaccagcc
    18181 tgcgcaaagt ggactgggaa agtctgcggc ctaatttcta ttttattttc ccggaagggg
    18241 cattagacgg gcaaccgcag agctggctta ccagtttccg ctgggagaat ggcaacggca
    18301 tgttgacgca actcaaccgc cagttcccga ccattagcct gttagatatt ggcgcgattt
    18361 taaaacaggt cggtcaggtg ctggagcagg taagtcgggc gctggaggtg atggtggtgc
    18421 tggtcaccgc ctgcggtatg ttgctgttgc tggcacaggt gcaggtggga atgcgccagc
    18481 gtcatcagga gctggtggta tggcgcacac tcggtgcggg gaaaaaactg ctgcgcacga
    18541 cattgtggtg tgagttcgcc atgcttgggt ttgtttccgg cctggtggcc gcaattggtg
    18601 cggaaacggc actggcagtg ttgcaggcga aagtgtttga tttcccgtgg gagccagact
    18661 ggcgattgtg gattgttctg ccgtgcagcg gtgcgctgct gctgtcgctt ttcggcggct
    18721 ggctgggtgc gcgactggtt aagggtaagg cgctgttcag gcagtttgcg gggtgatgag
    18781 agtaaataag gggcgttctg gttgaatgga acgccttgtt taaattaatt ctacaatatg
    18841 tttcattgat gatgttattg aattggtgat ttcctatctt tctattgctg atattaatct
    18901 gaatcggtgg agtttaataa ttttaaatat agccctacaa aaataactca gactaataaa
    18961 atcataaatc atatgcgttg aatggatatt atccatatag tgaatttgtt gatgatgaat
    19021 tcatctgtgc taaaaatttt agtttaataa aatattgaaa gtgacctgta ataacagtta
    19081 ttgttgattg agaacaaata agtttatgtg aaaaatatat aaatacatta gctggtcttg
    19141 tgtgtcattt tatttttttg ttgctaacac agggatatga acaataacta aaagggcact
    19201 ttatatgagc ggaaaaccag cggcgcgtca gggagatatg actcagtatg gcggtcccat
    19261 tgtccagggt tcggcaggtg taagaattgg cgcgccaact ggcgtggcgt gctcggtgtg
    19321 tccgggcggg atgacctcgg gcaacccggt gaacccgctg ctcggtgcaa aagtacagcc
    19381 cggcgagacg gaccttgcgc tgcccgaccc gctgccgttc attctctccc gcacctacag
    19441 cagctaccgg acgaagacgc ctgcgccagt gggaattttt ggccccggct ggaaagcgcc
    19501 ttctgatatc cgcttacaga tacgcgatga tgcactggta ctcaacgaca acggcgggcg
    19561 gatcattcac tttgagccgc tgctgccggg ggaggctgtg tacagccgca gtgagtcaat
    19621 gtggctggtg cgtggcggta aggcagcgca gccggacggc cacacgctgg cacggctgtg
    19681 ggcgtcgctg ccgccggata tccggttaag cccgcatctt tacctggcga ccaacagcgc
    19741 acaggggccg tggtggatac tggggtgatc tgagcgggtg ccgggtgctg aggacgtact
    19801 gccagcgccg ctgccgccgt accgggtgct taccgggatg gcggaccgct tcgggcggac
    19861 gctgacgtac cggcgtgagg ccgcaggcga cctggccggg gaaatcaccg gcgtgacgga
    19921 cggtgccggg cgggagttcc gtctggtgct gaccacacag gcgcagcggg cggaagaggc
    19981 ccggcagcag gcggaagagg cccggcagca ggcggtcgtc gccggagcaa aacgaccgga
    20041 cattcctgat tcactgccgg agagcacaga gtacggcccc gacaggggta tccgcctttc
    20101 ggcggtgtgg ctgatgcacg acccggcata cccggagagc ctgcccggtg cgccactggc
    20161 gcggtacacg tatacggaag ccggtgaact gctggcggta tatgaccgca gcaatacgca
    20221 ggtgcgcgct ttcacgtatg acgcgcagca cccgggccgg atggtggcgc accgttacgc
    20281 gggaaggccg gagatgcgct accgctacga cgatacgggg cgggtggtgg agcaactgaa
    20341 cccggcaggg ttaagctacc gctatcttta tgagcaggac cgcatcaccg tcaccgacag
    20401 cctgaaccgg cgtgaggtgc tgcatacaga aggcggggcc gggctgaaac gggtggtgaa
    20461 aaaagaactg gcggacggca gcgtcacgcg cagcgggtat gacgcggcag gaaggctcac
    20521 ggcgcagacg gacgcggcgg gacggcggac agagtacggt ctgaatgtgg tgtccggcga
    20581 tatcacggac atcaccacac cggacgggcg ggagacgaaa ttttactata acgacgggaa
    20641 ccagctgacg gcggtggtgt acccggacgg gctggagagc cgccgggaat atgatgaacc
    20701 gggcaggctg gtatcggaga catcgcgcag cggggagaca gtacgctacc gctacgatga
    20761 cgcgcacagt gagttaccgg cgacgacaac ggatgcgacg ggcagcaccc ggcagatgac
    20821 ggcggttcac cgcgaggaag gtatcagcct ttaccgctac tatgacaacc gtggccggtt
    20881 aacctcggtg aaagacgcac agggccgtga aacgcagtat gagtacaacg ccgcaggcga
    20941 cctgactgcc gttatcaccc cggacggcaa ccggagcgag acacagtacg atgcgtgggg
    21001 aaaggcggtc agcaccacgc agggcgggct gacgcgcagt atggagtacg atgctgccgg
    21061 acgtgtcatc agtctgacta acgagaacgg cagtcacagc gacttcagct acgatgcgct
    21121 ggaccggctg gtacagcagg gcggctttga cgggcggacg caacgttatc attatgacct
    21181 gaccggaaaa ctcacgcaga gtgaggatga ggggcttgtc accctctggc actacgatgc
    21241 gtcggaccgc atcacgcacc ggacggtgaa cggcgacccg gcagagcagt ggcagtatga
    21301 cggccacggc tggctgagag aaatcagcca cctgagcgaa ggccaccgtg tcgctgtcca
    21361 ctacggctac gacgataagg gccgcctgac gggcgaacgg cagacggtgg agaacccgga
    21421 gacgggggaa ctgctgtggc agcatgagac gaaacacgcc tacaacgaac aggggctggc
    21481 aaaccgcgtc acgccggaca gcctgccgcc ggtggagtgg ctgacctacg gcagcggtta
    21541 cctggcgggc atgaagctgg gcgggacgcc gctggtcgag tatacgcggg acaggctgca
    21601 ccgtgagacg gtgcgcagct tcggcagcat ggcaggcagt aatgccgcat atgaactgac
    21661 cagcacatac acccccgcag gccagttaca gagccagcac ctgaacagcc tggtgtatga
    21721 ccgtgactac gggtggaatg acaacggcga cctggtgcgc atcagcggtc cgcgacagac
    21781 gcgggaatac ggctacagcg ccacgggcag gctggagagc gtgcgcaccc tcgcaccgga
    21841 cctggacatc cgcatcccgt atgcgaccga cccggcggga aaccggctgc cggacccgga
    21901 gctacacccg gacagcacgc tcacggcgtg gccggataac cgcatcgcag aggatgcgca
    21961 ctatgtttac cactatgatg aatacggcag actgacggag aagacggacc gcatcccggc
    22021 gggtgtgata cggacggacg acgagcggac ccaccactac cactacgaca gccagcaccg
    22081 cctggtgttc cacacgcgga tacagcatgg cgagccactg gtcgagagcc gctacctcta
    22141 cgacccgctg agccgccgga cggggaaacg ggtgtggcgt cgcgagcgtg acttgacggg
    22201 gtggatgtcg ctgtcgcgta aaccggaggt aacgtggtac ggatgggacg gcgaccggct
    22261 gacgacggta cagaccgaca ccacgcgtat ccagacggta taccagccgg ggagcttcgc
    22321 gccgctcatc cgcatcgaaa cagacaacgg tgaacgggag aaagcgcagt gccgcagcct
    22381 ggcggagaag ttacagcagg aagggagcga agacggtcac ggtgtggtgt tcccggctga
    22441 actggtgggg ctgctggaca ggctggaggg ggaaatccgg gcaaactgcg tgagcagtga
    22501 aagccgccag tggcttgcgc agtgcgggct gacggtggag cggctggcgg cacagataga
    22561 gccggtttat ttgcctgagc gaaaaataca tctttatcac tgtgaccacc ggggcttgcc
    22621 gctggcgctt atcagtgaag acggcaatac ggcgtggagc gcggaatatg atgaatgggg
    22681 caaccagctt aatgaggaga acccgcatca cctgcaccag ccgtaccggc tgccggggca
    22741 gcagtatgat aaggagtcgg ggctgtacta caaccggaac cggtactacg atccgttgca
    22801 ggggcggtat atcactcagg acccgatagg gctggagg
//
LOCUS       DADMHC010000050        22514 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.050, whole genome shotgun sequence.
ACCESSION   DADMHC010000050 DADMHC010000000
VERSION     DADMHC010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22514
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.050"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..326
                     /locus_tag="JNZ57_001613"
     CDS             <1..326
                     /locus_tag="JNZ57_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310606.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827873.1"
                     /translation="RLQYRVAYGDGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNG
                     AETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWEL
                     VFSLR"
     gene            367..1110
                     /gene="cmoA"
                     /locus_tag="JNZ57_001614"
     CDS             367..1110
                     /gene="cmoA"
                     /locus_tag="JNZ57_001614"
                     /EC_number="2.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000019619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HAY8827874.1"
                     /translation="MSHRDTLFSAPIARLGDWTFDERVAEVFPDMIQRSVPGYSNIIS
                     MISMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHI
                     DAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGAL
                     VLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARL
                     HKAGFEHSELWFQCFNFGSLVALKAEDAV"
     gene            1107..2078
                     /gene="cmoB"
                     /locus_tag="JNZ57_001615"
     CDS             1107..2078
                     /gene="cmoB"
                     /locus_tag="JNZ57_001615"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HAY8827875.1"
                     /translation="MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSN
                     AVEFLPEIKPYRLDLLHSVTAESEEPLSTGQIKRIETLMRNLMPWRKGPFSLYGVNID
                     TEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQ
                     FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVN
                     EGELVLETLVIDGDENTVLVPGDRYAQMRNVYFIPSALALKNWLKKCGFVDIRVVDVC
                     VTTTEEQRRTEWMVTESLSDFLDPHDPSKTVEGYPAPKRAVLIARKP"
     gene            complement(2243..4672)
                     /locus_tag="JNZ57_001616"
     CDS             complement(2243..4672)
                     /locus_tag="JNZ57_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310609.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin guanine dinucleotide-containing
                     S/N-oxide reductase"
                     /protein_id="HAY8827876.1"
                     /translation="MTLTRREFIKHSGIAAGALVVTSAAPLPAWAEEKGGKILTAGRW
                     GAMNVEVKDGKIVSSTGALAKTIPNSLQSTAADQVHTTTRIQHPMVRKSYLDNPLQPT
                     KGRGEDTYVQVSWEQALKLIHEQHDRIRKANGPSAIFAGSYGWRSSGVLHKAQTLLQR
                     YMNLAGGYSGHSGDYSTGAAQVIMPHVVGSVEVYEQQTSWPLILENSQVVVLWGMNPL
                     NTLKIAWSSTDEQGLEYFHQLKKSGKPVIAIDPIRSETIDFFGDNATWIAPNMGTDVA
                     LMLGIAHTLMTQGKHDKVFLEKYTTGYPQFEEYLRGKSDNTPKSAAWAAEITGVPEAQ
                     IVKLAELMAANRTMLMAGWGIQRQQYGEQKHWMLVTLAAVLGQIGTPGGGFGFSYHYS
                     NGGNPTRVGGVLPEMSAAIAGQASEAADDGGMRAIPVARIVDALENPGGKYQHNGKEQ
                     TYPNIKMIWWAGGGNFTHHQDTNRLIKAWQKPEMIVVSECYWTAAAKHADIVLPITTS
                     FERNDLTMTGDYSNQHIVPMKQAVAPQFEARNDFDVFADLAELVKPGGKEIYTEGKDE
                     MAWLKFFYDAAQKGARAQRVTMPMFNAFWQQNKLIEMRRSEKNEQYVRYADFRADPVK
                     NALGTPSGKIEIYSKTLEKFGYKDCPAHPTWLAPDEWKGTADEKQLQLLTAHPAHRLH
                     SQLNYAELRKKYAVADREPITIHTEDAARFGIANGDLVRVWNKRGQILTGAVVTDGIK
                     KGVVCVHEGAWPDLENGLCKNGSANVLTADIPSSQLANACAGNSALVYIEKYTGNAPK
                     LTAFDKPAVQA"
     gene            complement(4697..5689)
                     /locus_tag="JNZ57_001617"
     CDS             complement(4697..5689)
                     /locus_tag="JNZ57_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707761.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C"
                     /protein_id="HAY8827877.1"
                     /translation="MRGKKRIGLLFLLIAVVVGGGGLLLAQKALHKTSDTAFCLSCHS
                     MSKPFEEYQGTVHFSNQKGIRAECADCHIPKSGMDYLFAKLKATDSATCRSCHSFDAM
                     DIASQSESAQKMHNKAQKGGETCIDCHKGIAHFPPEIKMDDNAAHELESQAATSVTNG
                     AHIYLFKTSRIGELATVNPGTDLTVVDASGKQPIVLLQGYQMQGSENTLYLAAGQRLA
                     LATLSEEGIKALTLNGEWQADEYGNQWRQASLQGALTDPGLADRKPLWQYAEKLDDTY
                     CAGCHAPIAADHYTVNAWPSIAKGMGARTSMSENELDILTRYFQYNAKDITEKQ"
     gene            complement(6077..6823)
                     /gene="cutC"
                     /locus_tag="JNZ57_001618"
     CDS             complement(6077..6823)
                     /gene="cutC"
                     /locus_tag="JNZ57_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HAY8827878.1"
                     /translation="MALLEICCYSMECALTAQQNGADRVELCAAPKEGGLTPSLGVLK
                     SVRQWVTIPVHPIIRPRGGDFCYSDGEFAAILEDVLTVRELGFPGLVTGVLDVDGNVD
                     MPRMEKIMAAAGPLAVTFHRAFDMCANPLNTLSNLAELGIARVLTSGQKSDALQGLSK
                     IMELIAHRDAPIIMAGAGVRAENLHHFLDAGVLEVHSSAGAWQASPMRYRNQGLSMSS
                     DAHADEYSRYVVDGAAVAEMKGIIERHQAK"
     gene            complement(6837..7403)
                     /locus_tag="JNZ57_001619"
     CDS             complement(6837..7403)
                     /locus_tag="JNZ57_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707763.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HAY8827879.1"
                     /translation="MANWQSIDELQDIASDLPRFTHALDELSRRLGLDITPLTADHIS
                     LRCHQNVTAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPG
                     EKRYPHEGWEHIEIVLPGDPETLNARALALLSDEGLSLPGISVKTSSPKGEYERLPNP
                     TLVVTDGKTTIKFHPWSIEEIVASEQSA"
     gene            7619..9352
                     /gene="argS"
                     /locus_tag="JNZ57_001620"
     CDS             7619..9352
                     /gene="argS"
                     /locus_tag="JNZ57_001620"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001025321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HAY8827880.1"
                     /translation="MNIQALLSEKVRQAMIAAGAPADCEPQVRQSAKVQFGDYQANGM
                     MAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALAS
                     DRLGVSTPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVG
                     DWGTQFGMLIAWLEKQQQENAGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQ
                     SGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKG
                     LAVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVL
                     YYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLAD
                     LLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML
                     AFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAAPVIIREDREAQLAARLLQFEETLT
                     VVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENEEVRNSRLKLAQLTAKTLKLGL
                     DTLGIETVERM"
     gene            9529..10017
                     /locus_tag="JNZ57_001621"
                     /pseudo
     CDS             9529..10017
                     /locus_tag="JNZ57_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416391.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
     gene            complement(10137..10529)
                     /locus_tag="JNZ57_001622"
     CDS             complement(10137..10529)
                     /locus_tag="JNZ57_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlhE"
                     /protein_id="HAY8827881.1"
                     /translation="MRTLLAILLFPLLVQAAGEGMWQASSVGITLNHRGESMSSAPLS
                     TRQPASGLMTLVAWRYQLIGPTPSGLRVRLCSQSRCVELEGQSGTTVAFSGIAAAEPL
                     RFIWEVPGGGRLIPPLKVQRNEVIVNYR"
     gene            complement(10529..12605)
                     /gene="flhA"
                     /locus_tag="JNZ57_001623"
                     /pseudo
     CDS             complement(10529..12605)
                     /gene="flhA"
                     /locus_tag="JNZ57_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416393.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
     gene            complement(12598..13701)
                     /gene="flhB"
                     /locus_tag="JNZ57_001624"
                     /pseudo
     CDS             complement(12598..13701)
                     /gene="flhB"
                     /locus_tag="JNZ57_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416394.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FlhB"
     gene            complement(13784..14428)
                     /gene="cheZ"
                     /locus_tag="JNZ57_001625"
     CDS             complement(13784..14428)
                     /gene="cheZ"
                     /locus_tag="JNZ57_001625"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase CheZ"
                     /protein_id="HAY8827882.1"
                     /translation="MMQPSIKPADEHSAGDIIARIGSLTRMLRDSLRELGLDQAIAEA
                     AEAIPDARDRLYYVVQMTAQAAERALNSVEASQPHQDQMEKSAKALTQRWDDWFADPI
                     DLADARELVTDTRQFLADVPAHTSFTNAQLLEIMMAQDFQDLTGQVIKRMMDVIQEIE
                     RQLLMVLLENIPEQESRPKRENQSLLNGPQVDTSKAGVVASQDLVDDLLDSLGF"
     gene            complement(14439..14828)
                     /gene="cheY"
                     /locus_tag="JNZ57_001626"
     CDS             complement(14439..14828)
                     /gene="cheY"
                     /locus_tag="JNZ57_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheY"
                     /protein_id="HAY8827883.1"
                     /translation="MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALN
                     KLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAG
                     ASGYVVKPFTAATLEEKLNKIFDKLDM"
     gene            complement(14843..15892)
                     /locus_tag="JNZ57_001627"
     CDS             complement(14843..15892)
                     /locus_tag="JNZ57_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000036372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator protein-glutamate
                     methylesterase"
                     /protein_id="HAY8827884.1"
                     /translation="MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDL
                     IKKFNPDVLTLDVEMPRMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELGAI
                     DFVTKPQLGIREGMLAYSEMIAEKVRTAAKASLAAHKPLSAPTTLKAGPLLSSEKLIA
                     IGASTGGTEAIRHVLQPLPLSSPALLITQHMPPGFTRSFADRLNKLCQIGVKEAEDGE
                     RVLPGHAYIAQGDRHMELARSGANYQIKIHDGPAVNRHRPSVDVLFHSVAKQAGRNAV
                     GVILTGMGNDGAVGMLAMRQAGAWTLAQNEASCVVFGMPREAINMGGVCEVVDLSQVS
                     QQMLAKISAGQAIRI"
     gene            complement(15895..16755)
                     /gene="cheR"
                     /locus_tag="JNZ57_001628"
     CDS             complement(15895..16755)
                     /gene="cheR"
                     /locus_tag="JNZ57_001628"
                     /EC_number="2.1.1.80"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HAY8827885.1"
                     /translation="MTSSLPCGQTSLLLQMTERLALSDAHFRRISQLIYQRAGIVLAD
                     HKRDMVYNRLVRRLRSLGLTDFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREAHH
                     FPLLADHARRRSGEYRVWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVL
                     EKARSGIYRHEELKNLTPQQLQRYFMRGTGPHEGLVRVRQELANYVDFAPLNLLAKQY
                     TVPGPFDAIFCRNVMIYFDQNTQQEILRRFVPLLKPDGLLFAGHSENFSHLERRFTLR
                     GQTVYALSKD"
     gene            complement(16774..18375)
                     /gene="tap"
                     /locus_tag="JNZ57_001629"
     CDS             complement(16774..18375)
                     /gene="tap"
                     /locus_tag="JNZ57_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein IV"
                     /protein_id="HAY8827886.1"
                     /translation="MFNRIRISTTLFLILILCGILQIGSNGMSFWAFRDDLQRLNQVE
                     QSNQQRAALAQTRAIMLQASTALNKAGTLTALSYPADDIKTLMTTARASLTQSTTLFK
                     SFMAMTAGNEHVRALQKETEKSFARWHNDLEHQATWLESNQLSDFLTAPVQGSQNAFD
                     VNFEAWQLEINHVLEAASAQSQRNYQISALVFISMIIVAAIYISSALWWTRKMIVQPL
                     AIIGSHFDSIAAGNLARPIAVYGRNEITAIFASLKTMQQALRGTVSDVRKGSHEMHIG
                     IAEIVAGNNDLSSRTEQQAASLAQTAASMEQLTATVGQNADNARQASELAKNAATTAQ
                     AGGVQVSTMTHTMQEIATSSQKIGDIISVIDGIAFQTNILALNAAVEAARAGEQGRGF
                     AVVAGEVRNLASRSAQAAKEIKGLIEESVNRVQQGSKLVNNAAATMTDIVSSVTRVND
                     IMGEIASASEEQRRGIEQVAQAVSQMDQVTQQNASLVEEAAVATEQLANQADHLSSRV
                     AVFTLEEHEVARHESAQLQIAPVVS"
     gene            complement(18421..19839)
                     /locus_tag="JNZ57_001630"
     CDS             complement(18421..19839)
                     /locus_tag="JNZ57_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HAY8827887.1"
                     /translation="MINRIRVVTLLVMVLGVFALLQLISGSLFFSSLHHSQKSFVVSN
                     QLREQQGELTSTWDLMLQTRINLSRSAVRMMMDSSNQQSNAKVELLDSARKTLAQAAT
                     HYKKFKSMAPLPEMVATSRNIDEKYKNYYTALTELIDYLDYGNTGAYFAQPTQGMQNI
                     DGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAIYAGTREIAAGNTDLSSRTEQQASA
                     LEETAASMEQLTATVKQNADNARQASQLAQSASDTAQHGGKVVDGVVKTMHEIADSSK
                     KIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSVQAAKEI
                     KALIEDSVARVDTGSVLVESAGETMNNIVNAVTRVTDIMGEIASASDEQSRGIVQVAL
                     AVSEMDRVTQQNASLVQESATAAAALEEQASRLTQAVSTFRLAASPLTNKPQTPSRPA
                     SEQPPAQPRLRIAEQDPNWETF"
     gene            complement(19984..20487)
                     /gene="cheW"
                     /locus_tag="JNZ57_001631"
     CDS             complement(19984..20487)
                     /gene="cheW"
                     /locus_tag="JNZ57_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HAY8827888.1"
                     /translation="MTGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQ
                     VTRIANTPAFIKGVTNLRGVIVLIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVV
                     DGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLGALGDRMLILVNIEKLLNSEEMALLD
                     SAASEVA"
     gene            complement(20508..22472)
                     /gene="cheA"
                     /locus_tag="JNZ57_001632"
     CDS             complement(20508..22472)
                     /gene="cheA"
                     /locus_tag="JNZ57_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HAY8827889.1"
                     /translation="MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIF
                     RAVHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQL
                     DAYKQSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPR
                     RIILSRLKAGEVDLLEEELGHLITLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEA
                     DQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSSESTSIRVAVEKVDQLIN
                     LVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFS
                     RYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKR
                     LAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEV
                     AMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQEMGGHVEIQSKQGTGTTIRILLPLT
                     LAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWK
                     VFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAAT
                     ILGDGSVALIVDVSALQAINREQRMANTAA"
BASE COUNT         5298 a         6182 c         5461 g         5573 t
ORIGIN      
        1 tgcgtttgca gtaccgcgtt gcctatggtg acggtggttt tagcgaactg caaagcgcta
       61 ttcgcattca tggtaacgcg gtggaatata ttcccatcgc gattgtgctg atgctgttta
      121 tggaaatgaa tggcgcagaa acctggatgg tgcatatttg cggcatcgtt ttgcttgctg
      181 gtcgtctgat gcattattac ggttttcatc accgtctgtt tcgctggcga cgttccggca
      241 tgagcgccac ctggtgtgcg ctgttgctga tggtgctggc gaatctttgg tatatgccct
      301 gggagttggt tttctccctg cgttagcgca caatacgcca ctttcttttt cccggatttt
      361 tacgttatgt ctcaccgcga cacgctattt tctgccccta tcgccagact gggcgactgg
      421 acctttgatg aacgggtagc tgaagtcttc ccggatatga tccagcgttc cgttcccggc
      481 tattccaata ttatttccat gattagtatg ctagccgagc gcttcgttca acctggtacg
      541 caggtttacg atctgggttg ttctctgggc gcggcgacgc tctcggtgcg tcgcaacatt
      601 catcatgata attgcaaaat tattgccatc gacaactccc cggcgatgat tgaacgctgc
      661 cgtcgtcata ttgacgccta taaagcccct acgccagtag acgtcattga aggtgatatt
      721 cgcgatatcg ccattgaaaa cgcatcgatg gtggtgctga attttaccct gcaattcctg
      781 gaaccttccg agcgccaggc attactggat aaaatttatc aaggactgaa cccgggcggc
      841 gcgctggtgc tttcggaaaa attcagtttc gaagatgcca aagttggtga actgttgttc
      901 aacatgcacc acgactttaa acgtgccaac ggttacagcg aactggagat cagccagaag
      961 cgcagcatgc tggaaaacgt gatgctgacc gattccgtgg aaacccataa agcacgcctg
     1021 cataaagccg gttttgagca tagcgagctg tggttccagt gctttaactt tggttcactg
     1081 gtggcattaa aagcagagga cgctgtatga tcgactttgg taacttttat tctctgattg
     1141 ccaaaaatca tctttcacac tggctcgaaa cgctgcccgc gcagattgct aactggcagc
     1201 gcgagcagca gcacgggctg tttaagcagt ggtccaacgc ggtggaattt ctgcctgaaa
     1261 ttaaaccgta tcgtctggat ttattgcata gcgtaaccgc cgaaagcgaa gagccactga
     1321 gcaccgggca aattaaacgc attgaaacgc ttatgcggaa cctgatgcca tggcgcaaag
     1381 ggccgttctc actgtatggc gtcaacatcg ataccgaatg gcgttccgac tggaaatggg
     1441 atcgtgttct gccccatctt tctgatttaa ccggacgcac cattctggat gtcggctgcg
     1501 gcagcggtta tcacatgtgg cgcatgattg gcgcaggcgc gcacctcgcg gtggggatcg
     1561 accctacgca actgtttctg tgccagtttg aagcggtgcg taaactactg ggtaacgatc
     1621 agcgcgcaca tttgttaccg ttaggtattg aacagcttcc ggcactgaaa gcctttgata
     1681 ccgtcttttc gatgggcgtg ctttaccatc gccgttcgcc gctggagcat ctctggcagt
     1741 tgaaagatca actggtgaat gagggtgaac tggtgctgga aacgctggtt attgatggcg
     1801 atgagaacac ggtgctggta ccaggcgatc gttacgcgca aatgcgtaat gtctatttca
     1861 tcccttccgc gctggcgctg aaaaactggc tgaagaagtg tggttttgta gatatccgcg
     1921 ttgtggatgt gtgcgttacc actactgaag agcagcgacg cactgaatgg atggttaccg
     1981 aatctctgtc cgatttcctc gacccacatg atccgagtaa gacagttgaa ggttatcctg
     2041 cgcctaaacg cgcggtgctg attgcgcgca agccgtaaag gtctggtatt actgccggat
     2101 gcagcgtgaa tgccttatcc ggcctacaaa cccttgctaa ttcaatctat tgcagggact
     2161 atgtaggcct gataagcata gcgcatcagg cagttttacg tttgcataac ctcagcgccc
     2221 gtttccgggc gctattcact tcttacgcct gaacagcagg cttatcaaat gccgttaact
     2281 tcggtgcgtt acccgtatat ttttcgatat acaccagcgc agagttaccg gcacaggcat
     2341 ttgccagctg cgagctgggg atatccgccg ttaacacgtt cgcactgccg tttttacaca
     2401 agccattttc cagatctggc catgcacctt catgcacgca taccacgcct tttttgatcc
     2461 cgtcagtcac caccgcgcct gtcagaatct gaccacgttt gttccacaca cgcaccagat
     2521 caccattcgc aataccaaag cgagcagcat cttcggtatg aatagtgatt ggttcacgat
     2581 ctgcaaccgc atatttttta cgcagttccg catagttaag ctgactatgt aaacggtgtg
     2641 ccggatgtgc ggtcagaagc tgcaactgct tctcgtcggc ggtacccttc cactcatcag
     2701 gcgcaagcca ggttgggtgt gccgggcaat ccttatagcc aaatttttcc agcgttttgg
     2761 agtaaatctc aattttgccg cttggcgtac ccagcgcatt tttcaccgga tcggcgcgga
     2821 aatcagcata acgaacgtac tgttcgttct tctcgctgcg gcgcatttcg atcagtttat
     2881 tttgctgcca gaaggcatta aacatcggca tagtcacgcg ttgcgcacgg gcacctttct
     2941 gagcggcatc atagaaaaat ttcagccacg ccatttcatc tttaccttcg gtatagatct
     3001 cttttccgcc aggtttcact aattccgcaa gatcggcaaa cacatcaaaa tcgtttcgcg
     3061 cttcaaattg cggagcgaca gcctgcttca tcggcacaat atgctggttg ctgtaatcac
     3121 cggtcatcgt caagtcattg cgctcaaacg atgtggtgat cggtaatacg atatctgcat
     3181 gtttagcagc tgcggtccag tagcattcag aaacgacgat catctccggt ttctgccatg
     3241 ctttaatcag acgattagta tcctggtgat gggtaaagtt accgccaccc gcccaccaga
     3301 tcattttgat attcggatac gtttgctctt taccgttatg ctgatatttg ccgccaggat
     3361 tttccagcgc atcgacgata cgggcaacag gaatcgccct cattccgcca tcatcagcgg
     3421 cctcgctggc ctgtccggca atcgccgcag acatttccgg cagcacgccg ccaacacgtg
     3481 tcgggttgcc accattggag taatgataag agaaaccaaa accgccgccc ggtgtaccaa
     3541 tctgccctaa caccgccgcc agcgtcacca gcatccagtg tttctgttca ccatattgct
     3601 ggcgctgaat tccccagcct gccatcagca ttgtgcgatt cgccgccatc agttcagcga
     3661 gtttgactat ctgcgcttcc ggtacgccag taatttccgc cgcccaggcc gcgctcttcg
     3721 gcgtattatc gctcttacct ctcagatact cttcaaactg cggatacccg gtagtgtatt
     3781 tttcaaggaa cactttatcg tgtttgcctt gtgtcatcag ggtatgcgca atccctaaca
     3841 tcagtgccac gtcggtgccc atattcggcg cgatccaggt ggcattatcg ccaaagaagt
     3901 cgatggtttc ggagcggata ggatcaatgg caatcactgg tttgccagat ttttttagct
     3961 gatggaagta ttccagccct tgctcatcgg tactgctcca ggcaattttt aaggtattca
     4021 gcgggttcat cccccacagc accacaacct ggctgttttc cagaatcagc ggccaggagg
     4081 tctgctgttc atacacctct acagaaccga ccacatgcgg catgatcacc tgtgccgccc
     4141 cggttgaata atcgccgcta tgcccggaat aaccgcccgc caggttcata taacgttgca
     4201 gtaaggtttg cgctttatgc aacacgccag aagagcgcca gccgtatgat ccggcaaaaa
     4261 tagccgatgg tccgttagct ttgcgaatgc gatcgtgttg ctcatgaatc agttttaatg
     4321 cttgttccca gctcacctgt acataggtat cttcgccacg acctttcgtc ggttgcagtg
     4381 gattatcgag atagcttttt ctcaccatcg gatgctgaat acgcgtcgtg gtgtgtacct
     4441 gatccgccgc cgtagactgt aaggaattcg gtatggtttt cgccagcgcg cctgttgaag
     4501 aaacaatctt gccgtccttc acttctacgt tcatcgctcc ccaacgtccc gcggtgagga
     4561 ttttaccgcc cttctcttct gcccatgcgg ggagcggtgc tgccgatgtc accaccagcg
     4621 ctccagcggc aataccgctg tgtttaataa attcacgtct tgttaatgtc ataacttcct
     4681 ccctgatcaa cgaggatcac tgtttctcgg taatatcttt ggcgttgtac tggaaatacc
     4741 gcgttaaaat gtccagttcg ttttcgctca tgctggttcg tgcccccatt cctttggcaa
     4801 tggacggcca cgcattgacg gtgtaatggt cggcggcaat aggggcatga caaccagcgc
     4861 aataggtatc gtcaagtttt tcagcgtatt gccatagcgg tttacggtcc gctaatccgg
     4921 gatcggtaag cgcaccctgt aaagacgcct gacgccattg attgccgtat tcgtcagcct
     4981 gccattcccc gtttagcgtg agcgccttga taccttcttc acttaatgtg gctagcgcca
     5041 gccgttgacc tgccgccagg tagagcgtgt tttcactgcc ctgcatttga taaccctgca
     5101 acagaacgat cggctgtttg ccactggcat caacgacggt gagatcggta ccaggattca
     5161 cggtagccag ctcgcctatg cgagaagttt tgaaaagata aatatgtgcg ccattagtca
     5221 ctgaagtagc ggcctgactt tccagctcat gcgccgcgtt gtcatccatt tttatttctg
     5281 gcggaaaatg ggcaatgcct ttatgacaat cgatacaggt ttcgccgccc ttttgtgctt
     5341 tgttatgcat tttctgcgca gattcacttt gcgaggcaat atccatggca tcaaaagaat
     5401 ggcaactacg gcacgttgca gagtcagttg cttttaattt agcaaataaa taatccatcc
     5461 ctgactttgg aatatggcaa tctgcacatt ccgcacgtat ccctttctgg ttcgaaaagt
     5521 ggacagttcc ctgatattcc tcaaaaggtt tactcatcga gtggcaggaa aggcaaaatg
     5581 ctgtatccga cgttttatgt aaggcttttt gcgccagcaa taacccgccg ccaccaacca
     5641 caaccgctat cagcaaaaac aataacccaa tgcgtttttt ccctcgcata gattcctcta
     5701 aataaattcc agaacaccga aatcattgga taattaaata cacaacgaat taaccgcttg
     5761 cataactcgg cacaacactg cctgaaataa tcgataaaga atatgattta ttacaatgta
     5821 atcattaatt gctaaggaat aaccctgttg ttatttagaa tatatatttg tcagttttag
     5881 caatttaaac cccataatta atgtgaatat ataaaatatt tttagcacaa cgctatgttc
     5941 actgtcaccc gctcaacaga tcacggttat cgtacgtttt ttatactgct cagggataaa
     6001 aaaaggcccc tgttgaaatt gcaggggcct ggtacgacca agcatcatat tgggcgacat
     6061 gatgcaacgg taaaaatcat ttggcctgat ggcgttcaat gattcctttc atttcagcaa
     6121 ccgccgcccc gtctacgaca taacgcgaat actcgtccgc gtgtgcatct gatgacatgg
     6181 acaatccttg attacgataa cgcatcggtg aagcttgcca cgctcccgcg gagctatgga
     6241 cttccagcac tccggcatcg aggaagtggt gcaggttttc tgcacggact cctgctccgg
     6301 ccataatgat tggagcatca cgatgggcaa taagttccat aatttttgat aaaccttgca
     6361 gtgcatctga tttttgccct gatgtcagca cccgggcgat gcccaattcc gcaagattac
     6421 tgagtgtatt taaagggtta gcgcacatat cgaaggcgcg atgaaaagtc actgccagcg
     6481 gaccggcagc agccattatt ttttccattc gtggcatatc gacattcccg tcaacatcga
     6541 gcacgcccgt caccagtcca ggaaaaccta attcgcggac tgtgagcaca tcctcaagaa
     6601 tggcggcaaa ctcaccgtcg ctgtagcaaa aatcaccacc gcgtgggcgg ataatcggat
     6661 gcacagggat cgtcacccac tggcgcacgg atttcagtac acccaacgac ggcgttaagc
     6721 ccccctcttt tggggctgcg cataattcaa ctctgtctgc gccgttttgc tgcgccgtta
     6781 gtgcacattc catgctgtaa cagcaaattt ccagtaatgc catttttact ccttaattac
     6841 gccgactgct cgctggcaac gatctcttca atggaccacg gatgaaactt aatagttgtt
     6901 ttgccatcgg tgaccaccag cgtcggattc ggtaatcgct catactcacc ttttggcgaa
     6961 ctggttttca ctgagatccc cggtaggctg agtccttcat cagaaagcaa tgccagcgca
     7021 cgggcattca gcgtttctgg atcacccggc agaacgattt caatatgttc ccaaccttcg
     7081 tgtgggtaac gtttttcccc gggccacggt agctccacaa tggaaaactg ccagtgcgca
     7141 acctgtaccg gttcatgcaa tttaaacaga caaatcggtc tgccattgat catattttct
     7201 gacaaaagct cgccacactg ttcaaaaccg cgacgccagc gctcagcggt gacgttttga
     7261 tggcaacgca aagaaatgtg atcggcagtc agcggagtga tatccaaccc cagacggcgg
     7321 gagagttcat ctaatgcgtg ggtaaatcgc ggtaaatccg atgcaatatc ctgcagctcg
     7381 tcgatagatt gccagttcgc cataatcact cttcgtcttt cagtaaaagc gttaatttac
     7441 cctgttgccc tgcgccaacc aaccgctgat ttcacgccgc ttctgatgca atagtgaaaa
     7501 cggcaatacg ccacgcgcac gttgctgacg aaaacagcca tttgcagtat actcccgccc
     7561 taatttcttt aactggtgcg ggcaattttt gctcgcttca tcaatgtaag gtattccggt
     7621 gaatattcag gctcttctct cagaaaaagt ccgtcaggcc atgattgcgg caggcgcgcc
     7681 tgcggattgc gaaccgcagg ttcgtcagtc agcaaaagtt cagttcggcg actatcaggc
     7741 taacggcatg atggcagttg ctaaaaaact gggtatggca ccgcgacaat tagcagagca
     7801 ggtgctgact catctggatc ttaacggtat cgccagcaaa gttgagatcg ccggtccagg
     7861 ctttatcaac attttccttg atccggcatt cctagctgaa catgttcagc aggcgctggc
     7921 gtccgatcgt ctcggtgttt ctacgccaga aaaacagacc attgtggttg actactctgc
     7981 gccaaacgtg gcgaaagaga tgcatgtcgg tcacctgcgc tctaccatta ttggtgacgc
     8041 agcagtgcgt actctggagt tcctcggtca caaagtgatt cgcgcaaacc acgtcggcga
     8101 ctggggcact cagttcggta tgctgattgc atggctggaa aagcagcagc aggaaaacgc
     8161 cggtgaaatg gagctggctg accttgaagg tttctaccgc gatgcgaaaa agcattacga
     8221 cgaagatgaa gagtttgccg agcgtgcacg taactacgtg gtaaaactgc aaagcggtga
     8281 cgaatatttc cgcgagatgt ggcgcaaact ggtcgacatc accatgacgc agaaccagat
     8341 cacctacgat cgtctcaacg tgacgctgac ccgtgatgac gtgatgggcg aaagcctcta
     8401 caacccaatg ctgccaggaa ttgtggcgga tctcaaagcc aaaggtctgg cagtagaaag
     8461 cgaaggggcg accgtcgtat tccttgatga gtttaaaaac aaggaaggcg aaccgatggg
     8521 cgtgatcatt cagaagaaag atggcggcta tctctacacc accactgata tcgcctgtgc
     8581 gaaatatcgt tatgaaacac tgcatgccga tcgcgtgctg tattacatcg actcccgtca
     8641 gcatcaacac ctgatgcagg catgggcgat cgtccgtaaa gcaggctatg taccggaatc
     8701 cgtaccgctg gaacaccaca tgttcggcat gatgctgggt aaagacggca aaccgttcaa
     8761 aacccgcgcg ggtggtacag tgaaactggc cgatctgctg gatgaagccc tggaacgtgc
     8821 acgccgtctg gtggcagaaa agaacccgga tatgccagct gacgagctgg aaaaactggc
     8881 taacgcggtt ggtattggtg cggtgaaata tgcggatctc tccaaaaacc gcaccacgga
     8941 ctacatcttc gactgggaca acatgctggc gtttgagggt aataccgcgc catacatgca
     9001 gtatgcttac acgcgtgtat tgtccgtgtt ccgtaaggca gaaattaacg aagagcaact
     9061 ggctgcagct ccggtaatca tccgtgaaga tcgtgaagcg caactggcag ctcgcctgct
     9121 gcagtttgaa gaaaccctca ccgtggttgc ccgtgaaggc acgccgcatg tgatgtgtgc
     9181 ttacctgtac gatctggctg gtctgttctc tggcttctac gagcactgcc cgatcctcag
     9241 cgcagaaaac gaagaagtgc gtaacagccg tctgaaactg gcacaactga cagcgaagac
     9301 gctaaagctg ggtctggata cgctgggtat tgagacagta gagcgtatgt aatcgatttt
     9361 tcgtgagagt aaagcctgat cagggttacc tgatcaggct tttttattgc catctaaatg
     9421 tattctgaaa atggacatgc cattgttttc tgactgttgg ataagaggcc agaagcgtaa
     9481 tatccggccc cagggaaacg ataacggttg aatttaagga ataccgcagt gtttaaattt
     9541 cttgtattaa cattaggcat tatctcttgc caggcttacg cagaagatac ggttatagta
     9601 aacgaccatg acatttcagc catcaaagat tgttggcaaa aaaattcaga tgatgatact
     9661 gacattaacg tgatcaaatc atgcctgcga caagaataca atctcgtcga tgcgcaatta
     9721 aataaagcct atggtgaagc ttatcgttat atagaacaag tgccacgcac aggtgtaaaa
     9781 aaaactgata cctaacaact taacttgctt aaaaaatcac agcgagcctg gctggatttt
     9841 agggacaaag aatgtgaatt aatcctttca aatgaggacg ttcaggattt aagtgaccct
     9901 tattctgaat cagaatggct ctcatgtatg atcatacaga ccaatacgcg aactcgccag
     9961 ttgcagctat accgtaactc tgaagatttt tatccaagcc ctttgacaag aggataattc
    10021 acatcttttt ggcatgtttt gttgcaagct attcctgata aataattgca acaagacatc
    10081 gagccttttt cactgagtta ttaaacatac tcgcgagcgc gtaatttttt tgtccttcag
    10141 cgataattca caatcacttc attacgttgt acctttagcg gtggaattaa ccgcccaccg
    10201 cctggcactt cccagataaa tcgcaacggt tctgctgccg ctataccgga aaaggccacg
    10261 gtggttccgc tctgcccctc taattcgaca caacgagatt gcgaacacaa gcgaacccgc
    10321 agtcctgaag gtgtcgggcc gataagctga taacgccacg ctaccagcgt catcaatcct
    10381 gaagcaggtt gtcgcgtaga aagaggcgca gacgacatcg actcaccgcg atgatttagc
    10441 gtaattccta cactacttgc ctgccacatc ccctccccgg cggcttgcac cagcagcgga
    10501 aacaataata ttgctaataa ggttctcatt atttgccgcc aattgtcgcc gtcatgcgga
    10561 tatgtcggtt atcagacagt tccagattcg acaggaccac taactgcggc aagctgcggc
    10621 gcaggaagcg agacaataat ggtcgcagcg cgtggttcac caacaatact ggcggcgcac
    10681 ccagcatctc ctgacgggat agagcttcct gagtttgcgc cagtaaacga tccgccagcc
    10741 ctggctccag tccttccccg ccctgcagcg cctgtagtaa caaacgttcc agcggtgtat
    10801 cgaggccaat aacatggact tcatctttgc caggaaacca ctgctgggta atcgcccgtc
    10861 ccaacgccac gcgcacgacg gcggttaatt catgtggatc gctttggatg ggcgcatgtt
    10921 ccgccagcgt ttcgagaatg gtgcgcatat cgcgaatcgg tactttttca tcgaggagat
    10981 tttgcagcac tttatgcagt gtggtgagcg tgacgacgcc aggaacgaga tcttccgtca
    11041 gctttggcat ctcctgggcg acgcgatcca acagctgttg cgcctcctga cgaccaaaca
    11101 gctctgcggc atgctggcta atgaggtggt taagatgcgt tgctaccacc gtgctggcct
    11161 caaccactgt gtacccctga atctgcgcct gttcttttag cgcactttca atccagatag
    11221 cattcaggcc aaatgccgga tcgacggtcg cctcaccagg taacgtcccg gcagcggttc
    11281 cagggttaat cgccaaccag cgccccggat aagcatcacc actgccaatc tccacgcctt
    11341 tcatcaaaat gcgatagcgg gcaggttgca gatccatatt gtcgcgaatg tgcaccactg
    11401 gcggcagaaa tcccatctcc tgggcaaatt tcttgcggat actgcgtata cggcccaaca
    11461 actcaccatc ctgctggaaa tcgaccatcg ggatcagtcg ataacccact tccattccca
    11521 gagaatcttc cagttgtaca tcgttccacg tcgcttcgac aacggtatta ttctctgcca
    11581 tttttaccgg tttgggttcg gcaggcgctt tttgttcgcg tccgcgtatc caccaggcca
    11641 gccccagatc cggcagtgaa cagcaaaaat accaggttcg gcattccagg caccaagccg
    11701 agtaaaccga gcacggcggc gcttaacaac ataacgcttg ggttactgaa aagctgattc
    11761 accatctgct cgccaacatc ctgatcggtg ctgacacgcg taacgatgac ccccgcggcg
    11821 gtagaaatca ccagcgtcgg aatttgtgcc accagaccgt cgccaatggt caatagcgta
    11881 taactttccg ccgcgtgtcc catgctcatg ccatgttgca gcacgccgac cagcaacccg
    11941 ccgacaacgt taatgaccat gatgaggatc ccggcgatgg catcgccgcg aacaaactta
    12001 cttgccccgt ccattgagcc gtaaaaatcg gcttcctgag tcacttcgga gcggcgtttt
    12061 ttcgcctcat cttcaccaat caatccagcg ttaaggtcgg cgtcaatcgc catctgctta
    12121 cccggcatac catcgagaac aaagcgcgca cccacttctg cgatacgccc ggcacctttg
    12181 gtaatgacca taaagttgat gatcacgaga atgacaaaca ccacgatacc tatagcgaaa
    12241 ttgccaccaa cgaggaagtg accgaacgct tcgaccacct tccctgccgc cgccgcgccg
    12301 gtatgccctt ccatcaaaat gatacgggtt gaagccacgt taagtgccag acgcaacaac
    12361 gtagtaaaca acagaatggt cggaaacgca gcaaactcaa gcgtgcgctg ggtaaacatc
    12421 gccaccagca acaccatgat cgacaaggca atattgaagg taaacaacag gtcgagtatg
    12481 aatgcgggca gtggcagcac catcatcgac aagatcaaca ggatcaaaat cggtccggca
    12541 aggatctgcc attgtgtcga tttcaggttt gcgggcaggc gcagcatcgc ggccagatta
    12601 ctcatgggtc ggtttctcgt taataaaatc cagggcttcc ggcaccggaa gatgagtagg
    12661 ttgtacaggg cgctgtccac cagccagacg ccagcgtttc agttgccaga tccaggccag
    12721 cacttccgcc accgcggcgt acagttgacc cgggatttgt tgaccaatct ccgcatgtcg
    12781 atacagcgct cgcgccagcg gcggcgcttc aagcgtcggg acgttatttt cagcgccaat
    12841 ttcacgaatg cgcagcgcga ccagccctgc acctttagcg accactttcg gtgcgctcat
    12901 tttgttttcg tcatactgca acgctaccga atagtgggtc gggttattga caatgacatc
    12961 cgctttcggc acatcggcca tcatccgacg ccgtgcggca gctcgctgca tctgacggat
    13021 ccgtccttta acatgggggt cgccttcgct ttgtttgaac tcatcacgaa tatcctgccg
    13081 cgacattcgc agctttttca ggtggctgaa gatttggaaa aagacgtcaa atcccaccat
    13141 tggaatgaca ccaagcacca ccagcagtgc gcatagccct accaaatcca tcgcattacc
    13201 catggcggta atcggagact cggccagtaa gcgcatcatc tgcggccagt gatgccagag
    13261 aaaaaaaacc gtcacgctgc caaccaggat ggttttcaaa attgctttaa gcaactccgc
    13321 gccagtctgt gccgagaaca tccgtttaat gcccggtagc gggttgagtt tggaaaactt
    13381 cggctgcaag gattttccgc taaataccag cccccccagc atgaccggag aaatgagcgc
    13441 taccagcacc acgccgctaa tcagcggtag cagcgccagc atggcttctc tgatcagcag
    13501 aataatctgc ccgaggatca gattcgggtc tttgataata ctgtgatcaa aatgcagccc
    13561 agcggagagc atgcccgaca atcgacgggc cagcgacaca ccgccgaacc agataacaca
    13621 cacgcccacc agcaaaatca gcagtgaggt cagttcacgg gaacgcggga tttagggctt
    13681 ttgctgccac acatcaagca tagtgtgcgt ttgtcggatg cggcgtcatc gccttatcag
    13741 accgcctgat atgacgtggt cacgccacat caggcaatac aaatcaaaat ccaagactat
    13801 ccaacaaatc gtccaccaga tcctgactgg ctaccacacc ggctttgctg gtatcgacct
    13861 gaggtccatt aagcaaactc tggttttcac gttttggacg cgactcctgt tccgggatgt
    13921 tttccaacag caccatcagc aactggcgtt cgatctcctg aatgacatcc atcatccgct
    13981 taataacctg cccggtgaga tcctgaaaat cctgcgccat catgatttcc agcagttgcg
    14041 cgttagtaaa gctggtatgc gcgggtacat ctgccagaaa ttgtcgtgta tctgttacca
    14101 gttcacgggc gtcggcaagg tcaatcggat cggcaaacca gtcatcccaa cgttgggtta
    14161 acgcttttgc tgatttctcc atttgatcct gatgcggttg tgacgcctca acactgttca
    14221 gcgcccgctc cgcagcctgg gcggtcatct gcacaacata gtacaaacga tcgcgcgcat
    14281 cggggatggc ttccgccgct tcggcaatgg cctgatccag ccccagttcc cgcaaactgt
    14341 cgcgcagcat acgcgtcagg ctgccgatgc gcgcaatgat atcgccagct gaatgctcgt
    14401 cagcaggttt gattgatggt tgcatcatag tcgcatcctc acatgtccag tttatcaaag
    14461 attttgttga gtttttcctc cagcgtcgcg gcggtaaatg gcttcaccac atagccactg
    14521 gcccccgctt gcgccgcagc aatgatgttc tctttcttcg cttctgcagt caccattaac
    14581 actggcaatg ccgacatcgc gccatccgca cgaattgttt tcagcaattc caggccatcc
    14641 atattgggca tgttccagtc ggagataaca aatccataac cgcctgcctg caacttattg
    14701 agagcgtcga cgccatcttc cgcttcctca acattattga atcccagctc tttcagcagg
    14761 ttacgcacta tgcgtcgcat ggtggaaaag tcatccacaa ccaaaaattt aagttcttta
    14821 tccgccattt cacactcctg atttaaatac gtatcgcctg tccggcacta atttttgcca
    14881 acatttgctg gcttacctgg ctaagatcga ccacttcgca gacaccaccc atattgatgg
    14941 cctcgcgcgg catgccgaac accacgcaac ttgcttcgtt ttgcgcaagg gtccatgccc
    15001 ccgcctgacg catcgccaac attcccaccg cgccgtcgtt gcccataccg gtcaggatca
    15061 ccccaaccgc attacgcccc gcctgtttgg cgacagaatg gaacaacaca tctaccgaag
    15121 gccgatgacg gttaaccgcc gggccgtcgt gaattttgat ttgataattt gcgccactac
    15181 gcgccagttc catatgccga tcgccctgcg caatataggc atgccccggc aagacacgtt
    15241 ctccgtcttc ggcttcttta accccgatct ggcaaagctt attaagtctg tcggcaaaag
    15301 agcgggtgaa accgggcggc atatgttggg taattaacaa tgccgggctg gaaagcggca
    15361 acggttgcag tacgtgacga attgcctcag ttccacccgt tgaagcacca atcgcaatca
    15421 gtttttcaga actcaacaac ggacccgcct tcagcgttgt cggtgctgac aatggcttat
    15481 gtgctgcaag gctcgccttt gctgccgtac gcaccttttc agcaatcatt tcgctatacg
    15541 ccagcattcc ttcgcgaata cccagttgcg gtttggtgac aaaatctatt gcccccagct
    15601 ccagcgcgcg cagcgtgact tctgatcctt tgccggtcaa ggaagaaacc atcacaacgg
    15661 gcattggacg caaacgcatt aatttttcga ggaaatccag tccgtccatc cgcggcattt
    15721 caacatccag cgtcagcaca tcgggattga atttcttaat caagtcacgc gcgaccagcg
    15781 gatcaggcgc ggtcgccacc atttccatgt cgctatggct gttgatgatt tctgtcatga
    15841 tctggcgcat cagtgccgaa tcatcgacag ataacaccct gattttgctc atcgttaatc
    15901 cttacttagc gcatacaccg tctgaccacg cagcgtgaag cggcgctcaa ggtggctaaa
    15961 gttttcagag tgacccgcaa acagcaatcc gtcgggttta aggagcggaa caaagcggcg
    16021 caaaatctcc tgctgggtat tttgatcgaa gtagatcatg acgttacgac agaagatcgc
    16081 atcaaacggc cccggcacgg tgtactgttt cgccagtaga ttcagcgggg caaaatcaac
    16141 atagttcgcc agctcctgac gcacgcgtac cagcccttca tgcggtcccg tccctcgcat
    16201 gaaataccgt tgcagttgct gcggcgtcag gtttttcaac tcttcatggc gataaatacc
    16261 gcttctggct ttttccagca cttcggtgtc gatatcactg gcaaacactt tccagcgtcc
    16321 gggcgcggtg cccaatgtgt cagccagcgt catcgcaatg ctgtacggct cttcgccggt
    16381 tgaagccgcc gcgctccata cgcgatactc gccagaacgg cgacgtgcgt gatccgcgag
    16441 cagagggaaa tgatgtgcct cacggaaaaa tgccgtcaga ttcgtggtca gcgaattgat
    16501 aaacgcctgc cactcaccgc tgtgctgatt agattccagc aagttcagat aatgaccgaa
    16561 atccgtcagt cctagcgaac gcaaacgacg aaccagtcgg ttgtaaacca tgtcgcgttt
    16621 atgatcggcc aggacgatcc cggctcgttg atagatcaat tgacttatcc gccgaaaatg
    16681 cgcgtcggaa agcgccaggc gctcggtcat ctgtaacaat aaagacgttt gcccacaggg
    16741 cagagatgaa gtcatagcgc cttctcaatc acttcaggat accactggcg caatttgtaa
    16801 ctgcgccgac tcatgtcgtg ctacttcatg ttcttcaagg gtaaataccg ccacacgcga
    16861 cgaaagatgg tcggcctgat tcgccagttg ttccgttgcc accgccgctt cttctaccag
    16921 cgaggcgttc tgctgagtca cctgatccat ctggctgaca gcctgtgcaa cctgctcaat
    16981 cccccgccgt tgttcttccg acgccgaagc aatttctccc ataatgtcgt tcacgcgggt
    17041 caccgaactg acaatatcgg tcatggtcgc ggcggcgtta ttcaccagtt tcgaaccctg
    17101 ctggacacga ttgactgact cttcgatcag ccctttgatc tcttttgctg cctgcgcgct
    17161 acggctggca agattgcgca cttcacctgc cactaccgca aaaccacgcc cctgctctcc
    17221 ggcgcgagcc gcttccactg ccgcattcag ggccagaata ttggtctgga aagcaattcc
    17281 gtcgataacg ctgataatgt cgccaatttt ttgcgagctg gtggcgatct cctgcatggt
    17341 gtgagtcatg gtactgacct gaacaccgcc cgcctgcgcc gttgtcgcgg cattttttgc
    17401 cagttccgac gcctgtcgtg cgttatcggc gttttgccct accgtggcgg ttaattgctc
    17461 catactggcg gccgtttgtg ccagcgatgc cgcctgctgt tcggtacgac ttgagagatc
    17521 gttattgcct gcgacaatct ccgcgatccc aatgtgcatc tcatggcttc ccttacgcac
    17581 atcactcacc gtcccacgca aagcctgctg catggtcttc aggctggcaa aaatggcggt
    17641 gatctcatta cgaccatata ccgcaatcgg acgcgccaga ttacccgcag caatgctgtc
    17701 aaaatggcta ccaataatgg ccagtggttg aacaatcatc ttgcgcgtcc accacagcgc
    17761 actgctgatg tagattgccg caacaataat catgctgata aacaccagcg ccgaaatctg
    17821 atagttacgc tgactttgcg cactggcggc ttccagcaca tggttgatct ccagctgcca
    17881 ggcctcaaag ttaacgtcaa acgcattctg tgatccctgc accggcgcag tgaggaaatc
    17941 cgaaagttga ttactttcaa gccaggtcgc ctgatgttcg agatcgttgt gccagcgggc
    18001 aaaacttttc tccgtctctt tttgcaatgc cctgacgtgc tcgttgcccg cagtcatcgc
    18061 cataaaactt ttaaacagcg tggtggattg cgtcagactg gcgcgcgccg tcgtcatcaa
    18121 cgttttaatg tcatccgccg gatagctaag tgccgtcaga gtgcccgctt tgttcagcgc
    18181 ggtactggcc tgtaacatta tcgcccgagt ttgcgctaat gccgcacgtt gctgattgct
    18241 ctgctcgacc tgattcagtc gttgcaaatc gtcgcgaaat gcccaaaaag acatgccgtt
    18301 actgccaatc tgcaagatcc cgcagagaat caaaattaaa aacagcgtgg tcgaaattcg
    18361 aatacgatta aacatcaacg ctccccatca ggcggcaatg accgcgttag taaatactcg
    18421 tcaaaatgtt tcccagtttg gatcttgttc agcaattcgc agtcgtggct gtgccggtgg
    18481 ttgctcactg gcaggacggg atggtgtttg cggtttattg gtgagtgggc tggctgccag
    18541 acggaacgtg gaaaccgctt gcgttaaacg actcgcctgt tcttccagcg cagcggcggc
    18601 ggtagctgat tcctgcacca gcgatgcgtt ctgttgcgtg acgcgatcca tttccgaaac
    18661 cgccaatgcg acttgaacga tgccacggct ctgttcatcc gatgccgatg caatctcgcc
    18721 cataatgtca gtcacgcgag tgacagcatt gacgatattg ttcattgttt ccccggcgct
    18781 ttcgaccagc accgaaccgg tatcaacgcg tgcgacggag tcttcaatga gggctttgat
    18841 ctcttttgcc gcctggacgc tgcgactggc aagattacgc acttcacccg ccaccacggc
    18901 aaaaccacgg ccctgttcac ccgcacgcgc ggcttcaacc gcggcattca gcgcgaggat
    18961 attagtctgg aaggcgatac cgtcgataac gctgataatg tcggcaattt tcttcgaact
    19021 atcggcgatc tcatgcatcg ttttcactac gccatccacc actttgccgc cgtgctgggc
    19081 ggtgtcggag gcactttgcg ccagttgcga ggcctggcgg gcgttatcgg cgttttgctt
    19141 cactgtcgcg gtgagctgct ccatgctggc ggcagtttct tccagcgcgg atgcctgctg
    19201 ttcagtacgg gaggaaagat cggtgttgcc cgccgcaatt tcacgggtac cggcatagat
    19261 ggcatctgaa ccttcgcgga catgagtgac ggtgtcagtc aaagagcgtt gcatatgtga
    19321 aacgctctgc gccaggtcgc ccatttcact gcgcccgtca atgttttgca ttccctgggt
    19381 tggctgagcg aaataagctc cagtattgcc ataatctaga taatcaatca gttcagttaa
    19441 cgctgtgtaa tagtttttat atttttcatc aatattacga ctggtagcga ccatttcagg
    19501 taacggtgcc atgcttttga attttttata atgcgtcgct gcctgcgcca atgttttcct
    19561 ggcgctatcg agcaattcaa ctttggcgtt actttgttga ttggaggaat ccatcatcat
    19621 ccgcaccgct gaacgactca ggttaatgcg cgtttgcagc attaaatccc aggttgacgt
    19681 cagctcgccc tgctgttccc gcaattgatt ggaaaccaca aagctcttct ggctatggtg
    19741 aagggaagaa aaaaacagac tgccggaaat aagctgtaac agtgcaaata cccccaacac
    19801 cattaccaac agcgtgacta cgcggatacg gttaatcata aggcaccttc ctgaaaacaa
    19861 gttgatctcg ttatcggcaa gaagggggga aactttattg ctgatgccac ccgccgcgaa
    19921 attgaaataa aaaacccgat gcgcagatca tcgggttcat ttcaattgag gaaatcggga
    19981 gaattacgcc acttctgacg ccgcgctatc taacagcgcc atctcttcgc tgttcagcag
    20041 tttttcgatg ttcaccagaa tcaacatccg gtcgcccagt gcgcccagtc cagtgagata
    20101 ttctgttgaa agcgtcacgg caaattccgg tgccggacga atttgctccg ccgtcaatga
    20161 aagcacgtct gagacgccgt caaccacgat gccgaccacc cgctgtccga gattcaggac
    20221 gataactacc gtgttgtcgt tatagtccac atccacctgg ctgaacttaa ttcgtaagtc
    20281 aacaatcagc acaataacgc cgcgcagatt cgtgacgcct ttgataaacg ctggcgtgtt
    20341 cgcaatccgt gttacctgat cgtagccacg gatctcctgc actttcagga tatcaatacc
    20401 gtactcttca tcaccaaggg taaataccag aaattcctgg cctgacggct cgctggccag
    20461 ctttgttaca ttcgtcatac cggtcatatt gttacctttt tactcattca ggcggcggtg
    20521 ttcgccatac gttgttcgcg gtttatcgcc tgcaaggcgg agacatcaac aatcagtgcc
    20581 acgctgccgt cgccaagaat ggtcgcagca gaaatgccgg ggactttgcg atagttactt
    20641 tcaaggtttt taaccacaac ctggtgctga ccaattaatt gatccaccag caaggcgtag
    20701 cggcgaccgc cactttgtaa gatcaccaca attccctggg tggcttcggt tttcgcgccc
    20761 gcgacgttga acactttcca cagttcgacg atgggcagat attcgccccg cacttccagc
    20821 acccgctcgc cgccggccag tggatgcaga tcggcttcac ggggttgcag tgattccatg
    20881 acagcattca gcggcagaat gaaaacttca tccgcaacgc gtacggacat gccgtcgagg
    20941 atggccagcg tcagcggcag taaaatgcgg atcgtagtgc cagtaccctg cttcgactgg
    21001 atttcgacat gaccgcccat ctcctggata ttacgtttaa cgacgtccat gccgacgccg
    21061 cgcccggaga cgtcggtgac ctgctctgcc gtggagaagc ctggtgcaaa tatcagcatc
    21121 gcgacttcgt cgtcgctcat gttttcgctg acagtcaaac cttgcgaggc cgcttttgcc
    21181 agaattcgct cacggtttag ccccgcccca tcgtcggtca cttcaatgca aatgttgccg
    21241 ccctgatgtt cggcagacag aattaaattt ccgacgctgt ttttacctgc ggcgagccgt
    21301 ttttctggca gttcaatacc gtgatcgagg ctattgcgta ccaggtgggt cagcgggtcg
    21361 ataatgcgtt ctatcaggct cttgtcgagc tcagtggaac tgcccaccag cgtcagttct
    21421 acctgcttgc cgagttttcc cgccagatca cgcaccagcc ggggatagcg actaaaaaca
    21481 tattccatcg gcatcatgcg aatcgacatc actgattcct gcaaatcacg ggcgttacgt
    21541 tgtaactgcc ccatgctggt tatcaaatca ccatgattaa ccgggtctag ttcgctggaa
    21601 cgctgggcaa gcatggactg ggtgataacc agctcgccga cgaggttaat taattgatca
    21661 accttttcta ccgctacacg gatgctggtg gattcactgc tgcgcgtcgt tttttcccgc
    21721 tccacgcggc cggttggtgc ttgttcggct gccagtttaa gcactggtgg ggtggatatt
    21781 ttgggcgaga cttctactgt ttcaaaggta atctgatcgg cttcaatcac aaaacagagt
    21841 accgctgtga tgtcatcttc ggcgatgtcg cccggtaata ttgccgagag cgaatccgcc
    21901 cctttcacca cgtcagttaa cgttatcaga tgtcccagtt cttcttccag caggtcgact
    21961 tccccggcct tcaggcgcga aaggataatt cgtcgcggcg actgactgcg actctgctca
    22021 tcttgcggtt cacttttggc aaccacactt aatcgggtca ctgcggatgg cgtttcgcct
    22081 ttcgcttcta atgccaattg acgcaaggcc tggcagatat aatcgaagct ggcggcatcc
    22141 ggctcttgcg actgtttata agcgtcgagc tgttcttgca tgatgtcctt cgtttccaaa
    22201 aacagattga taatgtcggt gttgagttgc atctcacctc gtctggcttc atcgagcagg
    22261 ttttccatca gatgcgtggt ttcctgcaaa acgctgaagc caaaagttcc tgcccctcct
    22321 ttgatcgagt ggacagcccg aaagatggca ttcaattgtt cggcatctgg cgcttccggc
    22381 tgcaaaacca gcagatgctg ctccatatca gccaacagtt cgtccgcttc atcaaaaaat
    22441 gtctgataaa aatcgcttat atccatgctc acgctgtcac ctcggttcgg ctgatggcat
    22501 tgtgggaaca ctga
//
LOCUS       DADMHC010000051        22419 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.051, whole genome shotgun sequence.
ACCESSION   DADMHC010000051 DADMHC010000000
VERSION     DADMHC010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22419)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22419)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22419
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.051"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..301
                     /locus_tag="JNZ57_001633"
     CDS             <1..301
                     /locus_tag="JNZ57_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HAY8827890.1"
                     /translation="SGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAE
                     LAKKGKGIIIISSEMPELLGITDRILVMSNGLVSGIVDTKTTTQNEILRLASLHL"
     gene            317..1327
                     /gene="mglC"
                     /locus_tag="JNZ57_001634"
     CDS             317..1327
                     /gene="mglC"
                     /locus_tag="JNZ57_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     permease MglC"
                     /protein_id="HAY8827891.1"
                     /translation="MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSN
                     ILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAAVVAATLLQSMDNANKVFPEMAT
                     MPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASP
                     ISGFDSGFSTFAQGFVALGSFRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPE
                     AAKVSGVNVGLNLLMIYALSGVFYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGG
                     VSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPYWQYIIKGAIIIFAVALDSLKYAR
                     KK"
     gene            complement(1454..2689)
                     /gene="preA"
                     /locus_tag="JNZ57_001635"
     CDS             complement(1454..2689)
                     /gene="preA"
                     /locus_tag="JNZ57_001635"
                     /EC_number="1.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dihydropyrimidine dehydrogenase
                     subunit PreA"
                     /protein_id="HAY8827892.1"
                     /translation="MLTKDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGV
                     VFKTIGFFTANEVSPRFDHLVKEDTGFIGFKNMEQIAEHPLEENLAALRRLKEDYPDK
                     VLIASIMGENEQQWEELARLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYC
                     RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMP
                     IVNGKSSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGA
                     ATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFDSLQEMVGLANNNIVPAEDLDRSYI
                     VYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRTPHCNTEKCVGCLLCGHVCPVGC
                     IDLGEVKFKKGEKEHPVTL"
     gene            complement(2683..3919)
                     /locus_tag="JNZ57_001636"
                     /pseudo
     CDS             complement(2683..3919)
                     /locus_tag="JNZ57_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708046.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
     gene            complement(4113..4352)
                     /locus_tag="JNZ57_001637"
     CDS             complement(4113..4352)
                     /locus_tag="JNZ57_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2542 family protein"
                     /protein_id="HAY8827893.1"
                     /translation="MDVQQFFVVAVFFLIPIFCFREAWKGWRAGAIDKRVKNAPEPVY
                     VWRAKNPGLFFAYMVAYIGFGILSIGMIVYLIFYR"
     gene            complement(4355..5074)
                     /gene="sanA"
                     /locus_tag="JNZ57_001638"
     CDS             complement(4355..5074)
                     /gene="sanA"
                     /locus_tag="JNZ57_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane permeability protein SanA"
                     /protein_id="HAY8827894.1"
                     /translation="MLKRVFLSLLVLIGLLLLTVLGLDRWMSWKTAPYIYDELQDLPY
                     RQVGVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTM
                     RKDLIAAGVAPSDIVLDYAGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHM
                     GIQAQCYAVPSPKDMLSVRIREFAARFGALADLYIFKREPRFLGPLVPIPAMHQVPED
                     AQGYPAVTPEQLLELQKKQGK"
     gene            complement(5224..6108)
                     /gene="cdd"
                     /locus_tag="JNZ57_001639"
     CDS             complement(5224..6108)
                     /gene="cdd"
                     /locus_tag="JNZ57_001639"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HAY8827895.1"
                     /translation="MHPRFQTAFAQLADNLQSALEPILADKYFPALLTGEQVSSLKSA
                     TGLDEDALAFALLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVH
                     AEQSAISHAWLSGEKALAAITVNYTPCGHCRQFMNELNSGLDLRIHLPGREAHALRDY
                     LPDAFGPKDLEIKTLLMDEQDHGYALTGDALSQAAIAAANRSHMPYSKSPSGVALECK
                     DGRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQWDAT
                     SATLKALGCHSIDRVLLA"
     gene            complement(6238..6933)
                     /locus_tag="JNZ57_001640"
     CDS             complement(6238..6933)
                     /locus_tag="JNZ57_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidB/LrgB family autolysis modulator"
                     /protein_id="HAY8827896.1"
                     /translation="MMANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPF
                     LMLTGISYDSYFKGSEVLNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVA
                     MVTGTSVALLMGASPEIAASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAV
                     FGHTLLNAMRIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLI
                     APFLFPIILAVMG"
     gene            complement(6930..7328)
                     /locus_tag="JNZ57_001641"
     CDS             complement(6930..7328)
                     /locus_tag="JNZ57_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HAY8827897.1"
                     /translation="MSKTLNIIWQYLRAFVLIYACLYAGIFIASLLPVTIPGSIIGML
                     ILFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAV
                     STLVVFLVVSWSSQLVHGERKVVGQKGSEE"
     gene            7588..8534
                     /gene="dusC"
                     /locus_tag="JNZ57_001642"
                     /pseudo
     CDS             7588..8534
                     /gene="dusC"
                     /locus_tag="JNZ57_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311053.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(16) synthase DusC"
     gene            complement(8922..9005)
                     /gene="yohP"
                     /locus_tag="JNZ57_001643"
     CDS             complement(8922..9005)
                     /gene="yohP"
                     /locus_tag="JNZ57_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YohP"
                     /protein_id="HAY8827898.1"
                     /translation="MKIILWAVLIIFLIGLLVVTGVFKMIF"
     gene            9139..10665
                     /gene="mdtQ"
                     /locus_tag="JNZ57_001644"
     CDS             9139..10665
                     /gene="mdtQ"
                     /locus_tag="JNZ57_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311052.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug resistance outer membrane protein
                     MdtQ"
                     /protein_id="HAY8827899.1"
                     /translation="MLLMYCHAKLKNISQHTVISAHRFLPDYSPMNRDSFYPAIACFP
                     LLLMLAGCAPMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWWLEYHDNQLTSLIN
                     NALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSAEGLMGPFALND
                     PAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQLLAGSV
                     ARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVDGVETDINASKTRQQ
                     LNDVAGKMKIIEARLSALTNHQTKSLKLKPVALPKVASQLPDELGYSLLARRADLQAA
                     HWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPIFD
                     SGRLNANLDIAKAESNLSITSYNKAVVEAVNDVARAASQVQTLAEKNQHQAQIERDAL
                     RVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGGGYKR
                     "
     gene            10718..11479
                     /locus_tag="JNZ57_001645"
     CDS             10718..11479
                     /locus_tag="JNZ57_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY8827900.1"
                     /translation="MAQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTA
                     REVVSHGVRAEIVQLDLGKLPEGAQALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFD
                     EWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHAL
                     GGLTKAMALELVRHKILVNAVAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGATHEIA
                     SLVAWLCSEGANYTTGQSLIVDGGFMLANPQFNPE"
     gene            complement(11609..12187)
                     /locus_tag="JNZ57_001646"
     CDS             complement(11609..12187)
                     /locus_tag="JNZ57_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416640.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY8827901.1"
                     /translation="MDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLV
                     VLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFM
                     YGFRVIGPTLIGASQLPPKIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHL
                     KHWVWLILVVVLVVGVRWWLKRRGKKKPDHQA"
     gene            12357..12932
                     /locus_tag="JNZ57_001647"
     CDS             12357..12932
                     /locus_tag="JNZ57_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416639.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YIP1 family protein"
                     /protein_id="HAY8827902.1"
                     /translation="MSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICA
                     FIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRHC
                     MVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKEEGLS
                     FSSSTLAIGVLVLEVLLALTVILWGYGYRLF"
     gene            13106..14038
                     /gene="pbpG"
                     /locus_tag="JNZ57_001648"
     CDS             13106..14038
                     /gene="pbpG"
                     /locus_tag="JNZ57_001648"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311048.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine endopeptidase"
                     /protein_id="HAY8827903.1"
                     /translation="MPKFRVSLFSLALMLAVPLAPQAVAKTAAATTASQPEIASGSAM
                     IVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPEMKGVY
                     SRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTR
                     FVEPTGLSVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMAIFSNPTYTLPFRNTNH
                     LVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKLVALVVMDAFGKYTHFADASRLRTW
                     IETGKVMPVPAAALSYKKQKAAQMAAAGQTAQND"
     gene            complement(14076..15791)
                     /gene="dld"
                     /locus_tag="JNZ57_001649"
     CDS             complement(14076..15791)
                     /gene="dld"
                     /locus_tag="JNZ57_001649"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HAY8827904.1"
                     /translation="MSSMTTTDNKAFLNELARLVGHSHLLTDPAKTARYRKGFRSGQG
                     DALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDIVIISTL
                     RLDKLHVLGKGEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSG
                     GSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRH
                     DGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAVFAVRLDTFEAEKNQ
                     QVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIAEKYGKDTFLMIDKLGT
                     DKMPFFFNLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHL
                     LLKMAGDGVGEAKSWLVDYFKQAEGDFFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSD
                     EVEDILALDIALRRNDTEWYEHLPPEIDSQLVHKLYYGHFMCYVFHQDYIVKKGVDVH
                     ALKEQMLELLQQRGAQYPAEHNVGHLYKAPETLQKFYRENDPTNSMNPGIGKTSKRKN
                     WQEVE"
     gene            15987..18284
                     /gene="bglX"
                     /locus_tag="JNZ57_001650"
     CDS             15987..18284
                     /gene="bglX"
                     /locus_tag="JNZ57_001650"
                     /EC_number="3.2.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucosidase BglX"
                     /protein_id="HAY8827905.1"
                     /translation="MKWLCSVGIAVSLALQPALADDLFGNHPLTPEARDAFVTELLKK
                     MTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAIFNTVTRQDIRAMQDQVMELSRL
                     KIPLFFAYDVLHGQRTVFPISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVD
                     VSRDPRWGRASEGFGEDTYLTSTMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEG
                     GKEYNTVDMSPQRLFNDYMPPYKAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRD
                     QWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGINMSMSDEYYPKYLPGLIKS
                     GKVTMAELDDAARHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVAR
                     ESLVLLKNRLETLPLKKSATIAVVGPLADSKRDVMGSWSAAGVADQSVTVLTGIKNAV
                     GENGKVLYAKGANVTSDKGIIDFLNQYEEAVKVDPRSPQEMIDEAVQTAKQSDVVVAV
                     VGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKEDQQADA
                     ILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYSHLNTGRPYNADKP
                     NKYTSRYFDEANGALYPFGYGLSYTTFTVSDVKLSAPTMKRDGKVTASVQVMNTGKRE
                     GATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQTVSFPIDIEALKFWNQQMKYD
                     AEPGKFNVFIGTDSARVKKGEFELL"
     gene            18536..19452
                     /gene="osmF"
                     /locus_tag="JNZ57_001651"
                     /pseudo
     CDS             18536..19452
                     /gene="osmF"
                     /locus_tag="JNZ57_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311045.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein OsmF"
     gene            19459..20616
                     /gene="yehY"
                     /locus_tag="JNZ57_001652"
     CDS             19459..20616
                     /gene="yehY"
                     /locus_tag="JNZ57_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter permease YehY"
                     /protein_id="HAY8827906.1"
                     /translation="MTYLRINPVLALLLLLTAIAAALPFISYAPNRLVSGEGRHLWQL
                     WPQTIWMLVGVGCAWLTACFIPAKKGSIFALILAQFVFVLLVWGAGKAATQLAQNGSA
                     LARTSLGSGFWLAAALALLACSDAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDL
                     SLMKEYANRQDVFDDALAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGEIFSLLNV
                     IQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVV
                     GLNQIPRDVLESARAMGMSGAQRFLHVQLPLALPVFLRSLRVVMVQIVGMAVIAALIG
                     AGGFGALVFQGLLSSAIDLVLLGVIPVIVLAVLIDALFDLLIALLKVKRND"
     gene            20609..21535
                     /gene="yehX"
                     /locus_tag="JNZ57_001653"
     CDS             20609..21535
                     /gene="yehX"
                     /locus_tag="JNZ57_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter ATP binding
                     protein YehX"
                     /protein_id="HAY8827907.1"
                     /translation="MIEFSHVSKLFGAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTL
                     KMINRLVEHDSGEIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQL
                     QKWSRARIDDRIDELMALLGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDE
                     PFGALDPVTRGALQQEMTRIHRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGN
                     PLTMLTRPANDFVRQFFGRSELGVRLLSLRSVADYVRREERAEGEALAEEMTLRDALS
                     LFVARGCEVLPVVNTQGQPSGTLHFQDLLEEA"
     gene            21540..22271
                     /gene="yehW"
                     /locus_tag="JNZ57_001654"
     CDS             21540..22271
                     /gene="yehW"
                     /locus_tag="JNZ57_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter permease YehW"
                     /protein_id="HAY8827908.1"
                     /translation="MKMLRDPLFWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQE
                     SFAALALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAV
                     LAIAVPVIGFGLQPAIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLR
                     KVELPLAAPVILAGVRTSVIINIGTATIASTVGASTLGTPIIIGLSGFNTAYVIQGAL
                     LVALAAIIADRLFERLVQALSQHAK"
     gene            complement(22252..22359)
                     /locus_tag="JNZ57_001655"
     CDS             complement(22252..22359)
                     /locus_tag="JNZ57_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YohO"
                     /protein_id="HAY8827909.1"
                     /translation="MRIAKIGVIALFLFMALGGIGGVMLAGYTFILRAG"
BASE COUNT         5365 a         5693 c         6010 g         5351 t
ORIGIN      
        1 ctccggtggt aatcagcaaa aggtgattat tggtcgctgg ctactaacgc aaccagaaat
       61 attaatgctc gatgaaccga cgcgcggtat tgatgtcggg gcgaagtttg aaatttatca
      121 gttaattgcc gaactggcga agaaaggcaa agggattatt attatctcct ctgaaatgcc
      181 tgagttgtta gggataacag accgtattct ggtcatgagc aacggtctcg tttccggaat
      241 tgtcgacaca aaaacaacaa cgcaaaacga aattctgcgt cttgcgtctt tgcaccttta
      301 agattagggg cttcccatga gtgcgttaaa taagaaaagt tttcttactt acctgaaaga
      361 gggcggtatt tacgtcgttc ttttagtttt gctggcgatt attattttcc aggacccaac
      421 atttttaagt ctgttgaact taagtaatat tctcacccag tcatcggtgc gtattattat
      481 cgcgctcggt gtggcagggt taattgtcac ccaggggacc gacctttctg cggggcgtca
      541 agtagggctg gcggcagtgg tggcagcgac attattgcag tccatggata acgccaacaa
      601 agtgttcccg gaaatggcga cgatgccgat tgcgctggtt attctgattg tctgtgccat
      661 tggtgcggtg atcggtttga tcaacggtct gattatcgct tatctcaacg tgacgccgtt
      721 cattaccacg ctcggcacga tgatcatcgt ctatggcatc aactcgctct attacgactt
      781 tgtcggggcg tcgccaattt ctggttttga cagtggcttc tctacctttg ctcagggctt
      841 tgtcgcgctg gggagtttcc gtctctctta catcaccttc tacgcgttga ttgcggtggc
      901 gttcgtctgg gtgttgtgga acaaaacccg cttcggtaag aacatttttg ccattggcgg
      961 taacccggaa gcggcaaaag tatctggtgt caacgtcggc ctgaacctgc tgatgatcta
     1021 cgcgttgtct ggtgtgttct atgccttcgg cgggatgtta gaagccggac gtatcggctc
     1081 tgccaccaac aacctcggct ttatgtatga actggatgct atcgcggcgt gcgtggtagg
     1141 cggtgtatcg ttcagcggcg gtgtggggac ggtgattggc gtggtgaccg gggtaattat
     1201 ttttaccgtc atcaactatg gcctgacgta tatcggcgta aacccatact ggcagtacat
     1261 catcaaaggg gcgattatta tcttcgccgt agcgctggat tcactgaaat acgcgcgtaa
     1321 gaagtgaaat gattgtggtc cgcattcggt cataaacgca cataacatca tgatctgtgt
     1381 ggttttgtag gccggataag gcgttcaagc cgcatccggc gacaggaacc aaatgccgga
     1441 tgcgtctctg gttttacaac gttaccgggt gttctttctc tcccttctta aacttcactt
     1501 ctccgagatc aatacaaccc accgggcaga cgtggccaca aagcagacaa cccacacatt
     1561 tctcggtatt acaatgcggt gtgcgggttt tctcgctcca ttccatcgcc tggtgaccgc
     1621 cgtcgtaaca ggaaatataa cagcgtccac agccaacaca tttatcaaga ttgatacggg
     1681 gatagacaat ataactgcgg tctaaatctt ccgccgggac aatattgtta ttcgccagac
     1741 ctaccatctc ctgcaacgaa tcaaatccct gatcggcgag ataatgcgac aacccgctcg
     1801 ccatatcttc tacgatgcga tagccgtact gcataatgcc ggtggtgacc tgtaacgttg
     1861 ctgcgccgag caataaaaac tccgccgcat cctcccaggt ttcaatgccg ccgataccgc
     1921 tgattgggaa atcgcgcagt tctggatggg tgcgcatttg ctgaatgaag cgcagggcga
     1981 tcggttttac cgctttaccg gaatatccgg aaatactcga ttttccgtta acgatcggca
     2041 taccgatttt ctgattaaga tcgatattgg tgatggattt aacggtgtta atcgccgcaa
     2101 tgccatctgc gccgccgcgc ttcgccgcca gcgccacttc gcacatatca ccgatattcg
     2161 gcgtcatctt cgccagcatt ggcagcgtgg aaccccgttt cactgcccga caatattttt
     2221 ctaccagctc cgggctttgc ccgacatcgc tacccatcgc atgagaagtc atttgcggac
     2281 aggagaagtt acactcgatc atatccgcgc cagcttcttg caccaggcgc gccagctcct
     2341 cccattgctg ctcattttcc cccatgatcg aagcgatcaa tactttgtcc gggtaatctt
     2401 ccttcagccg acgcagggcg gccagattct cttccaacgg atgttcagca atctgctcca
     2461 tatttttgaa gccgataaaa ccggtatctt ctttcaccag atgatcaaaa cgcggcgaga
     2521 cttcgttggc ggtaaaaaag ccgatcgttt taaacaccac accgccccaa cctgtgtcgt
     2581 aggctttggc acacatctca tagcagttgc ctaccggcga agaagagagg cagaacgggt
     2641 tgggaaactt cacgccgcaa aaagtaatcg aaagatcttt cgttaacatg agcaagctcc
     2701 ctctaaatag tgatgaatcg cctcggcggc ttctttcccg gttttcacgg catagaccac
     2761 ggttttgtca ccctcaacaa tatcgcccgc agcaaagact tgcggatcgc gggtctggta
     2821 attttgtgta ttgatagtgt tacgctgcgg ctctaactcc gcaaaggcat ccagtctggc
     2881 atgctgaccg acggcgagaa taattttatc tgccgccatc gtcagttcgc ccggtaaccg
     2941 tacatgctta aacgtgactt tattgccttc cacggctact ggcgtgaatc catcgatgat
     3001 cgaaacgccc agctcttggg cgctggtaaa ctctttttcg cttgccggaa actcatctaa
     3061 ctcttcacgc gctacgcaag ttaccgcctg acagccgaga actttcagcg tgctggctac
     3121 gtccatcgcg acatcaccgc caccgataat taatgcgctt tgtggaatgc tgatatcgcc
     3181 ttgcgcctgt cgtacacgtt gcaggaagtc gacggcaatc tcaacgtcgc tatgctcaaa
     3241 cagcggtagc ccggaaccgc ttgataaccc cacggtgacc agtaccgcgc ggttttccgc
     3301 tttcagttgc tccagggtga gtgttttacc gatttcgtta ttgcacttaa tggtcacgcc
     3361 cattttttca atacgggcga tctctgcatc cagcactgat tgcggtaacc ggaattgcgg
     3421 aataccgtta cgcaaccagc caccggggtg cgcttctttc tcataaatcg tgacgtcata
     3481 accctggttt gtcagtgtca cactggcctg caatccggca ggacctgcgc caataatcgc
     3541 gactttgccg agcgttttag taccgggctg atatttccat cccggtttgt tgttcaaaat
     3601 cagtaacaaa acgctgtaag cggccgatat caatgggagc atcaacaccg gcacgggtac
     3661 aaccgctttg acataatttc tccgtcgggc acactctggc acaaacggca ccgagggcat
     3721 tattttcgcg aattgtctcg gcagcgcctt taaaattacg aaagtagatt gagcgaataa
     3781 atttccccgg atcggtctgt gccgggcaag cctgactaca gggagcgtca tgacataata
     3841 aacagcgaga ggcttcttta atcgccagta aaggcgtaaa agccggagtg agttcatcca
     3901 gataattttg ttgcggcatg tgatcttcct taatgctatg agtaattaag gcgaacgcta
     3961 aataaatatt gcgtgctgat attaaggcta tgcgcgtggg gaaatttaaa ctgtgaaagg
     4021 attcacaaat agctgcggtt cagaatgtta tatccgcagc ttattgagtg aagtaataat
     4081 tattctcaat aattaacaga aaagagaaaa tattaacgat agaaaataag ataaacaatc
     4141 atgccgatag ataaaatccc gaagccgata tatgccacca tataagcgaa aaagagtccg
     4201 ggattttttg ctcgccagac atacaccggt tccggtgcat ttttaacccg tttatcaatc
     4261 gcgcctgcgc gccagccttt ccatgcttcg cggaaacaaa atatcgggat aaggaaaaaa
     4321 acggcaacga caaaaaactg ctgtacatcc ataactactt tccttgtttc ttttgtaatt
     4381 caagtaactg ttcgggtgtg acggcgggat acccctgcgc atcttccggc acctggtgca
     4441 tagccggaat agggaccagc ggccctaaaa aacgcggttc acgtttaaaa atataaaggt
     4501 cagccagcgc accgaaacgg gcggcaaatt cgcgaatacg tactgacagc atatctttcg
     4561 gtgacggtac ggcataacac tgagcctgaa tccccatatg cagcgcaata aataatgccc
     4621 gctcacagtg gaaacgttgg gtgataataa tgaaatcatt agtatcgaaa actttgcgtg
     4681 tacgcactat ggaatccagc gtacgaaagc ctgcgtaatc gagaacaata tctgatgggg
     4741 cgacaccagc agcgattaaa tctttgcgca tggtcatcgg ctcattataa ctttgcaatg
     4801 cgttatcgcc gctcagtaat agataattta ccttaccgct gttataggca ttaatcgctc
     4861 cttgaatgcg gtagcgataa tactgattaa ttacgccagt acgataatat tttgctgttc
     4921 cgagcaccac accgacctgg cggtagggga gatcctgcaa ttcgtcgtag atataaggcg
     4981 cggttttcca gctcatccag cgatcgaggc cgagcacagt caacagcagc aagccgataa
     5041 ggactaacag gctgaggaac acgcgcttta acatgcagga gactcgatct aagggaaatt
     5101 tccatcaggc tactttaccc gctggttttg cgcaagaaac ggcaaactgt ttgccgggat
     5161 tttcgacacc aggagagggc tggcaagccg gacaaggcgt tcacgccgca tccggcacca
     5221 ggcttaagcg agaagcacgc ggtcgatact gtgacagccg agcgctttca gcgttgcgga
     5281 ggtggcatcc cactgaatca acggcgcatc ggctttttct gccagaaccg cgcgctggat
     5341 atccgggtaa tcataaccct tgagattcaa cagaattaac gctccctgca acggtggcag
     5401 agtcgggttg aatgcggcgt tttcagcgta gctgccgctg aaaatacgac cgtctttaca
     5461 ttccagcgcg acaccgcttg gcgacttact gtaaggcatg tgcgaacggt ttgccgccgc
     5521 aatcgccgcc tgagaaagcg catcaccagt cagcgcatag ccgtgatcct gctcgtccat
     5581 cagcagcgtt ttaatctcca gatctttcgg cccaaaggca tccggcagat agtcacgtag
     5641 cgcgtgtgcc tcgcggcccg gcagatgaat acgcagatcc agaccgctgt tcagttcatt
     5701 cataaactga cggcagtgac cacaaggcgt gtagttaacg gtgatggctg caagcgcttt
     5761 ttcaccactc aaccaggcgt ggctgatcgc gctttgttcg gcatgaacgg tttgctgcat
     5821 tgtcgcacca ataaattcca tattggcacc aaaataccag gttccgctca caccgcgcgc
     5881 aattgcgcca acattaaaat tcgacaatgg cgtacgcgca caggccgccg ccagcggaag
     5941 tagtgcgaat gccagcgcgt cttcgtccag ccccgttgcg ctcttcagcg atgagacttg
     6001 ctccccggtc aacaaagcgg ggaagtactt gtctgccaga ataggttcca gtgcagattg
     6061 caagttatcc gcaagttggg caaaagcggt ttgaaaacgt ggatgcatgg cgttgcctca
     6121 taatcatgta atgggataat agtttacgaa cccgttatgg ctttatatgt gatctgaatc
     6181 tcattaatta tgcaacgcgt gaaacttaca tcaaaaatgc gcgacgcatc gcaaatttta
     6241 gcccattact gccagaataa tcgggaaaag gaacggtgcg atcagcgaag taattatccc
     6301 gcataacacc agcgctagcg aactaaatgc accttcctga taatccagct cggcgcagcg
     6361 cgctgtaccg agggcgtgcg aggcagtccc cattgccaga ccgcgcgcag ctttggtacg
     6421 aatacgcatc gcattaagca atgtatggcc aaataccgcg ccgaggatgc cgacgaaaat
     6481 cacgcaaact gcgctgattg ccggaatacc gccaatactg ccgccaaccg ccattgcaat
     6541 aggcgtggtg actgatttcg gcaggattga cgcggcgatt tccggtgaag cgcccatcaa
     6601 caatgccacg gaagtccccg tcaccatcgc aaccacgctg ccgataaaac agatggtgat
     6661 gatcgatttc cagcgcgcgc ggatctggtg tagctgctca tataaaggat aggccagcgc
     6721 gacgaccgcc ggttgcagca gatcgtttag cacttcgcta cctttaaagt aactgtcgta
     6781 agagatgccg gtcagcatta aaaaaggaat gatcaccacc attgctacca gcaacgggtt
     6841 aagcagggga aacttatacc gtgccgccag tttgcgggcg gcaaaaaaga caatcaacgt
     6901 cagcggtaat gaccaccaga tattcgccat cattcttctg atcctttctg acctacgact
     6961 ttacgttcgc cgtgtaccag ttgtgaactc cagctcacca ccagaaaaac caccagcgta
     7021 ctgacagcac aggaaaccac taccgggcca aactgcgcgc ggagcaaatc aaaatattgc
     7081 atgacgccta cgccaatcgg cacaaacaat agcgccatat agcgaatcag tacgtagcac
     7141 cccggattga cccattttgc cggaagaatt tgcaaggcca gcaggacaaa caggatcagc
     7201 atcccgatga tgctgcccgg aatggttacc ggtagcaggg aagcaatgaa aatgcctgca
     7261 tacaggcagg cataaatcag gacgaaagcg cgtaaatatt gccagataat gttcagtgtc
     7321 ttactcataa tcaacacccc agatgagatg gattcatcat acaattaatt cgtaaaacgt
     7381 gctaccgatc acattaagaa atcagcgctt attttttcgc tccccggcat tacgcaatgc
     7441 gcaacgaact caggcataca tcaagcatag agagggatta cagtttgcag caatccctct
     7501 ttgcagacct ttaatccgtt gaccataggc gctaacatgg cgcctcattt ttttgcgggt
     7561 gaagatatgc gtgtgttact ggctccgatg gagggtgtgc ttgctccgat ggagggagtg
     7621 cttgactctc tggtgcgtga attgctgacc gaagttaacg actacgatct gtgcatcacc
     7681 gagtttgtcc gcgtggtgga tcaactgctg ccggtaaaag tttttcatcg catttgccct
     7741 gagctacaaa acgccagccg gacaccatcc ggtacgctgg tgcgcgtgca gttgttgggt
     7801 cagttcccac aatggctggc agagaacgcc gcccgtgcgg tggaattagg ttcctggggc
     7861 gtggatctca attgcggttg cccgtcgaaa acggtcaacg gtagcggtgg tggggcgacg
     7921 ttactcaaag atcctgaact catctaccag ggtgcaaaag cgatgcgtga agctgtaccg
     7981 gcgcatttgc ccgtcagcgt gaaagtgcgt ctgggctggg acagcggtga gaagaagttt
     8041 gaaatcgccg atgcggttca acaggctggt gctacggagc tggtggtgca tggacggaca
     8101 aaagagcagg gttaccgcgc ggagcatatt gactggcagg cgattggcga gattcgccag
     8161 cggctgaata ttccggtgat tgccaacggc gaaatctggg actggcagag tgcgcaacaa
     8221 tgcatggcga tcagcggctg cgacgcagga ttggtcgcgg ggcgctcaat attcccaacc
     8281 tgagccgggt ggtaaaatat aacgaaccgc gaatgccgtg gccggaggtg gttgctttgc
     8341 tgcaaaaata tacccgtctg gaaaagcagg gcgataccgg gttatatcac gtagcgcgga
     8401 ttaaacagtg gttgagttat ttgcgtaaag aatacgatga agcaacagaa ttatttcagc
     8461 atgttcgggt gttgaataat tcccatgata ttgcaagggc tattcaggca attgatatcg
     8521 ataagctgcg ataatagtgg aatcgcagct tatcagagac aatgaatcgc ttattcagct
     8581 tcatcatctt gttgcgctcc tttcatgaac taagccacat attgccactg gcgcaaggtg
     8641 cgcgcagagg gaggacaatc gcctcctccc cctgcacccc cgggctctgg cgaacaaaat
     8701 cgccgctgcg cggtaccttc agcttatccc cttcggctac cgggtcgggc gcgaggtaac
     8761 gtccttgtaa gacgcgccct cagcccacat ccatgtgggc tgccccggcc ttcggggaac
     8821 gcttcagcga ttttgacgcc accaacaccg gagctgtttg caaatcaagt acacaaaata
     8881 tctagttcct gacctgacaa cttatatgcc atatctgatt tttaaaatat catcttaaat
     8941 acgccagtca ccaccagtag cccaatcagg aaaataatca atacagccca gagtataatt
     9001 ttcattggcg ttcctttatt tgtgagtgct gaataagtat aggaaaaaac gaagcccttc
     9061 gctgtcattt ataagtgatt aagataaatc ggagaatatc attcacttag tctatatttt
     9121 tctgggtatg tcgttttatt gctactgatg tattgccacg cgaaactaaa aaatatatcg
     9181 caacacacgg taatctccgc gcaccgtttc ttacctgatt attcccccat gaatcgtgat
     9241 tccttttatc cagccatcgc ctgttttccg ctgttactga tgctggccgg gtgtgcgcct
     9301 atgcatgaaa cccgccaggc gttaagccag caaacgcccg ctgcacaagt tgacaccgca
     9361 ttacccacgg cgctgaaaaa tggttggcca gacagccaat ggtggctgga gtatcacgat
     9421 aatcagctca cttcattaat taacaatgca ctacagaacg caccggatat gcaggtggct
     9481 gaacagcgca ttcagctagc tgaagcccag gcgaaggcag ttgccactca ggatggtccg
     9541 cagatcgact tttcggcgga tatggagcgg caaaaaatgt cggcagaagg gctaatgggg
     9601 ccgtttgctc tgaacgatcc ggccgcaggt acgaccggtc cgtggtacac caacggaact
     9661 tttggcttaa cggcgggctg gcatctcgat atctggggaa agaatcgggc ggaggttact
     9721 gcccgcctgg gtacggttaa agcacgggcg gcggaacgcg agcaaacccg ccaattgctg
     9781 gctggcagcg tagcccgcct gtactgggag tggcaaaccc aggcggcgtt aaacacggtc
     9841 ttgcagcaaa tagaaaaaga gcagaacacc attatcgcga ccgatcgcca gctatatcag
     9901 aacgggatta cttcttcagt tgacggtgtg gaaaccgata ttaatgccag caaaacccgg
     9961 cagcagctca acgatgtcgc ggggaaaatg aaaattattg aggcacggtt aagcgcactt
    10021 acaaatcacc agacaaagtc attgaagctt aaaccggtcg cgttgccgaa agtggcaagc
    10081 cagcttcctg atgaactggg gtactcctta ctggcccggc gggcagattt gcaggcggcg
    10141 cactggtacg ttgagtcatc gctaagcacc attgatgcgg caaaagcggc attttatcct
    10201 gacatcaacc tgatggcctt cctgcaacag gatgcgttgc acttaagcga tctgttccgt
    10261 cattccgcgc agcaaatggg cgttacggca ggcctgacgc tacctatttt cgatagtggt
    10321 cgtcttaacg ccaatctcga tatcgcaaaa gccgaaagca acttgtctat caccagctac
    10381 aacaaagcgg tggttgaagc ggtgaatgac gtggcgcggg cagccagtca ggttcagaca
    10441 cttgcggaga aaaaccagca tcaggcgcaa attgagcgcg atgccttgcg tgtggtaggt
    10501 cttgcgcagg cgcgctttaa cgcgggcatc attgctggtt cccgcgtcag cgaagccaga
    10561 atccccgcgc tgcgtgagcg ggccaatggc ctgttattgc aagggcagtg gctggatgct
    10621 tccattcaac tcactggtgc gttgggcggg ggttacaaac gctgatgata tgcgccttct
    10681 atacttaacg tttattcagc gttaagtgga gaactcgatg gcacaggttg cgattattac
    10741 cgcctccgat tcggggatcg gcaaagagtg cgcgttatta ctggcgcagc aggggtttga
    10801 tattggtatt acctggcact cagatgaaga aggggcaaaa gatactgcgc gtgaggtagt
    10861 tagccacggc gtacgtgcgg agattgtgca gctggatctc ggtaaactgc cagaaggtgc
    10921 gcaggcgctg gagaaactca ttcaacggct ggggcgtatt gatgtgctgg tgaataatgc
    10981 gggcgcaatg accaaagcgc cgtttcttga tatggctttc gatgagtggc gcaagatttt
    11041 taccgttgat gtcgatggtg catttttatg ctcacaaatt gcggcccgcc agatggtgaa
    11101 acaagggcag ggcggtcgca tcatcaacat tacgtcggta catgaacata cgccgctgcc
    11161 ggatgccagc gcctacacag ccgctaaaca tgcgctcggt gggttaacca aagcgatggc
    11221 gctggagctg gtcaggcata agattttggt gaacgcagtc gcgcctgggg cgatcgccac
    11281 gccaatgaat ggcatggatg acagcgacgt gaagcccgac gcggagcctt cgattcctct
    11341 gcggcgtttt ggcgcaacgc atgagattgc cagcctggta gcgtggctgt gctcagaggg
    11401 cgcaaattac accaccgggc agtcgttgat agtggatggc ggctttatgt tggcgaatcc
    11461 gcagttcaac ccagaatagc gcagtgaggt gcgtggttat ttcaatgggt aaaattttgg
    11521 taggcatgat aagacgcaca agcgtcgcat caggcatggt gcaccggatg tcggatgcgg
    11581 cgcgaacgcc ttacccaggg caatggtttt acgcctgatg atccggcttt ttcttcccgc
    11641 gccgtttcag ccaccagcgc acgcccacca ccagaaccac gaccagaatc aaccagaccc
    11701 agtgcttcaa atgctggtcg agattgtgca accacggcgc aatcacctga ccaccagcgt
    11761 aaccaatagt ggtaaaaatc aacgcccagg caaatgcgcc gagaatattc agcggcagaa
    11821 agattttcgg cggcagctgg ctggcaccaa tcagcgtcgg gccaatcacc cgaaagccat
    11881 acataaagcg cgtaccaatg acaaacagat acggatggcg ttggataagt ttctgcgccc
    11941 gctcaatttt atcctgatgt ttcgagaaac ggcgtaacag cttgccgcca aaccgccgtc
    12001 cgcacagata aagcacctgg tcgccaatca tgccgccaag cgccacagaa agtaccacca
    12061 gcgggaactt taatagcccc tgatgtgccg caacgcctcc cagcaaagtc acggtttcac
    12121 cttccgccag gctaccgatc accagcgcgg cataaccata ttgtgagatg agtgtattga
    12181 gatccatagg ccagtctgtc tccctttggt tgcctgtaag catacaccct ggaaatcatt
    12241 cacgctgaaa aaggacatac atcagacggt gcaaattaca tggatgaaca aaaaataacc
    12301 acaagctgac ttatacttga actgtcaggt tcatgaactc acaacaaggg ggcggtatga
    12361 gccatgtctg gggactgttt tcccatcccg atcgtgaaat gcaggtgatt aatcgcgaaa
    12421 acgaaacgat ttctcaccat tacacccacc acgttttgct gatggcggcg attccggtga
    12481 tttgcgcctt cattggcact acacagattg gctggaattt tggcgatggc actatcctga
    12541 agttatcctg gtttaccgga ctggcgctgg ctgtcctgtt ttatggcgtt atgctggctg
    12601 gggttgcggt aatggggcgg gtcatctggt ggatggcgcg taattatccg cagcgtcact
    12661 gcatggtctt cgcgggctac gttgcaactc cgctgttttt aagcggtctg gtggcgcttt
    12721 atccgctggt ctggttgtgt gcgctggtcg gcacggtggc gctgttttac accggctacc
    12781 tgctttacct tggtattccg agcttcctga atatcaacaa agaggaaggc cttagcttct
    12841 ctagttcgac gctggcgatt ggcgtgctgg tactggaagt gctgctcgcc ctaaccgtta
    12901 tactatgggg ctacggttat cgtttgttct agaaagttct ttgacgttgc attgctggcg
    12961 taaatgtcag caatgcagca tttcctcacg attctccttt gacgatcgca ctttttgctc
    13021 gttatgatgg cgtcgctagc ctcagtaaat ccttactccg gcggtgcgca acccgtgcgc
    13081 gtgaaccact atctgaatgc tcatcatgcc gaaatttcga gtttctttat ttagcctggc
    13141 cctgatgctg gctgtgcctt tggcaccgca ggccgttgcg aaaacggcag ccgctaccac
    13201 cgcttcacaa ccggaaattg cctccggtag cgcgatgatt gttgatctga ataccaacaa
    13261 agtgatctat tcgaaccacc cggatctggt gcgtccgatt gcgtctatca gcaaattaat
    13321 gaccgcgatg gttgtgctgg atgcacgact gccgctggat gaaaaactaa aagtggatat
    13381 cagccagacg ccggagatga aaggggtcta ttcgcgcgta cgactgaata gcgaaatcag
    13441 ccgtaaagat atgctgttgc tggcgctgat gtcttcagaa aaccgcgcgg cggcaagcct
    13501 tgcgcaccat tatcccggtg gttacaaagc ctttattaag gcaatgaatg cgaaagcgaa
    13561 atcgctcgga atgaacaaca cgcgctttgt tgaacctacc ggattgtcgg tgcataacgt
    13621 ttcaactgcc cgtgacttaa ccaaactgct cattgccagc aaacaatatc cgttgatcgg
    13681 gcagttaagt actacccggg aagatatggc aatcttctct aacccgacgt atacgctgcc
    13741 gttccgcaat actaatcatc tggtgtatcg cgataactgg aatattcagt taaccaaaac
    13801 cggctttacc aatgcggcgg gccattgtct ggtgatgcgt acggttatca ataataaact
    13861 ggtggcgctg gtagtgatgg acgcgtttgg caaatatacc cattttgccg atgccagccg
    13921 cctgcgtacc tggattgaaa ccggtaaagt gatgcctgtg ccggcagcag cgttgagcta
    13981 taaaaaacaa aaagccgccc aaatggcggc ggcggggcag acggcacaga acgattaagt
    14041 gaattcggat ggcgatactc tgccatccgt aatttttact ccacttcctg ccagtttttc
    14101 cgtttactgg ttttaccgat ccccggattc atgctgttgg tcggatcgtt ctcgcgatag
    14161 aacttctgca acgtctccgg tgctttatac aaatgaccga cgttatgctc ggcagggtac
    14221 tgcgcgccgc gctgctgtag cagttccagc atctgttctt ttaacgcatg cacatccacg
    14281 ccttttttca ctatgtaatc ctgatggaag acatagcaca taaaatggcc gtaatagagc
    14341 ttgtgcacca gctggctgtc gatctccggc ggtaaatgct cataccactc ggtgtcgtta
    14401 cgccgcagag cgatatccaa cgccagaatg tcttcgactt catcggaatg caccgcctga
    14461 taacgaattg ctgcgcccgc agcggcgaaa cggtgtaaaa acgctttgct gccttcctcc
    14521 ggcgtacaga caaagaaatc gccttcggcc tgtttgaaat aatctaccag ccacgatttg
    14581 gcttcaccga cgccatcgcc cgccattttt aacagcagat gatgctcgta tttatcgcgc
    14641 cagtttttca tgcgcggcgg taaatggctg gggaacaggt gaccgaattt ttgcatcgca
    14701 cggtcagtaa aatgcggacg gaagaatttc actttctcca gcatcgcatc ggtgcgtccc
    14761 ttgagattaa agaagaacgg catcttgtcg gtgcctaact tatcaatcat caggaaagtg
    14821 tctttgccgt atttttccgc aatatcgtag atatcccggt gcatatattc cccggcaacc
    14881 ggcagatttt cgaagttagc cagaatatga cggcggattt cggtcagcac ttccggctgg
    14941 ttggtgccga tataaaacac ctgctgattt ttttccgcct cgaaggtatc aagacgtact
    15001 gcaaagacgg ccagcttccc ggcgcaacca gaagattcaa ataaccgatc cggatcggcg
    15061 ttataacgtg cgggcgtgtc ggcttcaata tcacgaacgc ggtggacata gtcataatcg
    15121 tgggcgtgac gaccatcgtg acgcacatcg tcatctttga tgcgatcatc atccagcttg
    15181 ctaaggatct gctccggcgt ttcgcccaga tcaatcccca gatggttcac cagcgtcagt
    15241 ttgccgtctt catttatacg cgcgaataac gacatttcgg tatacgccgg gccacgttgc
    15301 accagcgagc cgccggagtt gttacaaata ccaccgatga ccgatgcgcc tatacacgat
    15361 gatccaatca ctgagtgcgg ttcgcgtccc agcggtttga gggctttttc cagcgaatag
    15421 agcgtggtgc ccggataggc cagcacctgt tcgcccttgc cgagaacgtg cagcttgtcg
    15481 agacgcaggg tgctgatgat cacgatatcg cgatcatagt cgttaccgtt tggcgtcgat
    15541 ccttcggtca ggcctgtatt ggcagcctgc atcagaataa ttttgtcggc ggtgacgcag
    15601 gctttcagca cccgccacaa ttccagtagt gagccaggga aaacgacagc cagcgcgtcg
    15661 ccctgaccag aacggaagcc cttgcgatag cgggccgttt ttgcgggatc ggtgagcagg
    15721 tgtgaatgac cgaccagacg ggcaagttca ttcaaaaagg ctttattatc agttgttgtc
    15781 atggaagaca ttttccactc cttgtggtgg ggaaaaaata tcacaaacta gaatagcgcc
    15841 ttgtatgaca attcagcgag tgaatatttt gaaaattcag acaataaact gagcattctt
    15901 tttctctctc catcatgctt atggcaaact acggtttttg caccattttc gctgcctcgt
    15961 cgggcaacag aggaagaaaa atccatatga aatggctatg ttcagtagga atcgcggtga
    16021 gtctggccct gcagccagca ctggcggatg atttattcgg caaccatcca ttaacgcccg
    16081 aagcgcggga tgcgttcgtc accgaactgc ttaagaaaat gacagttgat gagaaaattg
    16141 gtcagctgcg cttaatcagc gtcggcccgg ataacccgaa agaggcgatc cgcgagatga
    16201 tcaaagacgg tcaggttggg gcgattttca acaccgtaac ccgtcaggat atccgcgcca
    16261 tgcaggatca ggtgatggaa ttaagccgcc tgaaaattcc tcttttcttt gcttacgacg
    16321 tgctgcacgg tcagcgcacg gtgttcccga ttagcctcgg tctggcctcg tcttttaacc
    16381 tcgatgcagt gaaaacggtc ggacgtgtct ctgcttatga agcggcagat gatggcctga
    16441 atatgacctg ggcaccgatg gtcgatgtct cgcgcgatcc gcgctgggga cgtgcttccg
    16501 aaggttttgg cgaagatacg tatctcacct caacaatggg taaaaccatg gtggaagcga
    16561 tgcagggtaa aagcccggca gatcgctact cggtgatgac cagcgtcaaa cactttgccg
    16621 catacggcgc ggtagaaggc ggtaaagagt acaacaccgt cgatatgagt ccgcagcgcc
    16681 tgtttaatga ttatatgccg ccgtacaaag cggggctgga cgcaggcagc ggcgcggtga
    16741 tggtggcgct gaactcgctg aacggcacgc cagccacctc cgattcctgg ctgctgaaag
    16801 atgttctgcg cgaccagtgg ggctttaaag gcatcaccgt ttccgatcac ggtgcaatca
    16861 aagagctgat taaacatggc acggcggcag acccggaaga tgcggtgcgc gtggcgctga
    16921 aatccggaat caacatgagt atgagcgacg agtactaccc gaagtatctg cctgggttga
    16981 ttaaatccgg taaagtgacg atggcagagc tggacgatgc tgcccgccat gtactgaacg
    17041 ttaaatatga tatggggttg tttaacgacc catacagcca tctcggtccg aaagagtctg
    17101 acccggtgga taccaatgcc gaaagccgct tgcaccgcaa agaagcgcgt gaagtggcgc
    17161 gtgaaagcct ggtgttgctg aaaaaccgtc tcgaaacgtt accgctgaaa aaatccgcaa
    17221 ccattgcggt ggttggcccg ctggcagaca gcaagcgtga cgtgatggga agctggtcgg
    17281 cggcaggtgt tgcagatcaa tccgtgaccg tgctgaccgg gattaaaaat gccgtcggtg
    17341 aaaacggtaa agtgctgtat gccaaagggg cgaacgttac cagtgacaaa ggcattatcg
    17401 atttcctgaa tcagtatgaa gaagcggtca aagtcgatcc gcgttcgccg caagagatga
    17461 ttgatgaagc ggtgcagacg gcgaaacaat ctgatgtggt ggtggctgta gtcggtgaag
    17521 cacaggggat ggcgcacgag gcctccagcc gtaccgatat tactattccg caaagccaac
    17581 gtgacttgat tgcggcgctg aaagccaccg gtaaaccgct ggtgctggtg ctgatgaacg
    17641 ggcgtccgct ggcgctggtg aaagaagatc agcaggctga tgcgattctg gaaacctggt
    17701 ttgcggggac tgaaggcggt aatgcaattg ccgatgtgtt gtttggcgat tacaacccgt
    17761 ccggcaagct gccgatgtcc ttcccgcgtt ctgtcgggca gatcccggtg tactacagcc
    17821 atctgaacac cggtcgtccg tataatgccg acaagccgaa caaatacact tcgcgttatt
    17881 ttgatgaagc taacggggcg ctttatccgt tcggctatgg tctgagctat accactttca
    17941 ccgtctctga tgtgaaactt tctgcgccga ccatgaagcg tgacggcaaa gtgacggcca
    18001 gcgtgcaggt gatgaacacc ggtaaacgcg aaggggccac ggtagtgcag atgtacttgc
    18061 aggatgtgac ggcttccatg agtcgtccgg tgaaacagct gaaaggcttt gagaaaatca
    18121 ccctgaaacc gggcgaaact cagaccgtta gcttcccgat tgatatcgag gcgctgaagt
    18181 tctggaatca acagatgaaa tatgacgccg agcctggcaa gttcaatgtc tttatcggca
    18241 ctgattccgc acgcgttaag aaaggcgagt ttgagttgct gtaatgcttt agtaagggcg
    18301 tgacatttgc gccctttgcc tgatgttcat atcttaactt gctgaatttt cgccctttgt
    18361 aggccggata aggcgctcgc gccgcatccg gcaggaaacg ccggaccgaa tatgcctctt
    18421 aagtatttat ctgattctgc aactgaatcc gtccgctcag gctaatcccg ccattatcaa
    18481 ctatgctttt ctcttaattc gctgaaaaca acagtaaaag aatgaggaaa gcatcatgcc
    18541 actctcaaag gtctgggcag gttcactggt tttgttggca gccgtgagcc tgccgctgca
    18601 cgcggcttcc cccgttaaag tcggttcaaa aatcgatact gaaggcgcgc tgctcggcaa
    18661 tatcattttg caggtactgg aaagccacgg cgtaccgacg gtcaataaag tgcaactcgg
    18721 aacgactcct gtggtgcgcg gggcgattac ttccggtgaa ctggatatct atccggaata
    18781 taccggcaat ggcgcgtttt tctttaaaga tgaaaacgat gcagcgtgga aaaacgcgca
    18841 gcaaggttac gagaaagtca aaaaactcga tgcagagcaa aacaagttaa tctggctgac
    18901 gcccgcacct gcaaataaca cctggaccat cgccgtgcgt caggatgtgg cagagaaaaa
    18961 caaactcact tcgcttgctg acctgagtcg ttatctgaaa gagggcgcac cttcaaactg
    19021 gcagcctcgg cagagtttat cgaacgcgcc gatgccttac ccgcgtttga aaaagcctat
    19081 ggctttaagc tcggtcagga tcagttgctg tcactggctg gtggcgacac ggcggtgacg
    19141 attaaagccg ctgcccagca aacttctggc gttaatgccg caatggctta cggcactgac
    19201 ggtccggtcg cggcgctggg gctgcaaacc ttaagcgatc cgcaaggcgt gcaacctatc
    19261 tacgcgcctg caccagtggt gcgtgagtcg gtgctgaaag agtatccgca aatggcacag
    19321 tggctacagc cagtcttcgc cagcctcgat gcaaaaacat tgcagcaact gaatgccagc
    19381 attgcagtgg aaggactgga tgccaaaaaa gtggctgccg actacctgaa acaaaaaggg
    19441 tgggcgaagt aatttcccgt gacttatcta cgtattaatc ctgttctggc gctgctgctg
    19501 ttgctgacgg caatcgcagc agcgctgccg tttatcagct acgcgcctaa tcgtttagtc
    19561 tcgggtgaag ggcgtcatct ctggcaactg tggccgcaaa cgatctggat gctggtgggc
    19621 gttggttgcg cctggctgac agcctgtttt attcccgcta aaaaaggcag catttttgca
    19681 ctcattctgg cgcaattcgt cttcgtattg ctggtgtggg gagctggaaa ggcggcgacc
    19741 caactggcgc aaaatggcag tgcgctggcg cgtaccagcc tcggcagtgg tttctggctg
    19801 gctgcggcgc tggcattgct ggcctgtagc gatgccatcc gccgaatctc cacgcatccg
    19861 ctgtggcgct ggttgttgca tatgcagatt gccattattc cgctgtggtt gctttactcc
    19921 ggcacgctta acgatctctc gctaatgaaa gaatacgcca accgtcagga tgtgtttgac
    19981 gacgcgctgg ctcaacatct gacgttgctg tttggtgcgg tgctgcctgc gttagtgatt
    20041 ggtgtgccat tgggcatctg gtgctacttt tccaccgcgc ggcaggggga gattttttct
    20101 ctgctcaatg tcattcagac cgtgccttcg gtggcgctct ttggcctgtt gattgcgccg
    20161 cttgccgcgc tggtgacggc ctttccgtgg ctggggaagc tcggcatagc aggaaccgga
    20221 atgacacccg cactgattgc gctggtgctc tatgccttgc tgccgctggt gcgcggcgtg
    20281 gtagtaggct tgaaccagat cccgcgcgat gtgctggaga gcgccagagc gatggggatg
    20341 agcggggcgc agcgattcct gcatgttcag ttaccgctgg cgttaccggt atttctgcgc
    20401 agcctgcggg tggtgatggt gcaaattgta ggcatggcgg tgattgcggc gttaatcggc
    20461 gcaggcggtt ttggtgcgct ggttttccag gggctgctaa gcagcgccat tgatttagtg
    20521 ttgctggggg tgatcccggt aattgttctg gcggtgctga tcgatgcgct gttcgattta
    20581 cttatcgcac tgttgaaggt gaaacgtaat gattgaattt agccatgtca gcaaactgtt
    20641 tggcgcacaa aaagccgtta acgatctcaa tctcaatttt caggaaggga gtttttcggt
    20701 gctgattggc acatctggct ccggcaaatc caccaccctg aaaatgatta accgcctggt
    20761 ggaacatgac agcggagaga tccgctttgc cggagaagaa attcgctcgc tgccagtact
    20821 ggagttgcgc cgccgtatgg gctatgccat tcaatctatt ggcctgtttc cccactggag
    20881 cgtggcacaa aacattgcca ccgtgccgca attacaaaaa tggtcgcggg cgaggattga
    20941 cgatcgtatc gacgaattaa tggcgctact ggggctggag tcaaatttac gtgagcgtta
    21001 tccgcatcag ctttccggtg gtcagcagca acgtgtggga gtagcgcgcg cactggctgc
    21061 cgatccgcaa gtcttactga tggatgaacc ttttggcgca ctggacccgg taacgcgcgg
    21121 cgcgttgcaa caagagatga cgcgcattca ccgtttgctg gggcgtacca ttgtgctggt
    21181 tactcatgat attgatgagg cgctacggct ggcagaacat ctggtattga tggatcacgg
    21241 tgaagtggtg cagcagggga atccgctgac gatgctgact cgtccggcga atgattttgt
    21301 ccgccagttt tttggacgta gtgaactggg tgtgcgcctg ctttcgttac gtagtgtggc
    21361 ggattacgtg cgtcgcgaag aacgggcaga aggtgaggca ctggcagaag agatgacgct
    21421 gcgcgatgcg ctctccctgt ttgtcgcgcg gggatgcgag gtgctgccgg tggtgaacac
    21481 gcagggccag cctagcggca cgctgcattt tcaggatctg ctggaggagg cgtaagcgta
    21541 tgaagatgtt gcgcgatccg ctgttctggc tcattgcttt gtttgtggca ctgattttct
    21601 ggctgcctta cagccagccg ctgtttgctg ccttgttccc tcaactgcca cgacccgttt
    21661 atcagcaaga aagttttgcc gctctggcac tggctcattt ctggctggtg ggaatttcga
    21721 gtttgtttgc ggtgatcatt ggtactggtg ccggaattgc tgtcactcgc ccgtggggcg
    21781 cggaatttcg cccactggtg gaaactattg ccgccgttgg acagactttt ccgcccgtcg
    21841 cagtgctggc gatcgccgtt ccggtgatcg ggtttggtct gcaaccagcg attatcgcct
    21901 tgatccttta cggtgtgctg cccgtcctgc aggcgacact tgccgggctg ggagcgattg
    21961 atgccagcgt gacagaagtt gcgaaaggta tgggaatgag tcgtggtcag cgactgcgta
    22021 aggtcgagct accgctggcg gctccggtga ttctggcggg cgtgcgaact tcggtgatta
    22081 tcaacattgg tacggcgacg atcgcctcaa cggtaggggc cagcacgctg ggtacgccca
    22141 tcatcatcgg gcttagcgga tttaataccg cgtatgtgat ccagggggcg ttactggtgg
    22201 cactggcggc gatcatcgca gaccgcctgt ttgaaaggct ggtgcaggcg cttagccagc
    22261 acgcaaaata aaggtataac ctgcgagcat gacgccacca attccgccta acgccataaa
    22321 caggaacagg gcgatgaccc caattttagc tatgcgcata atgcactcct tatgttaacg
    22381 aaaggattgt acagtaaagc gcatttgtta acgaatcat
//
LOCUS       DADMHC010000052        22413 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.052, whole genome shotgun sequence.
ACCESSION   DADMHC010000052 DADMHC010000000
VERSION     DADMHC010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22413)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22413)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22413
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.052"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            205..624
                     /gene="umuD"
                     /locus_tag="JNZ57_001656"
     CDS             205..624
                     /gene="umuD"
                     /locus_tag="JNZ57_001656"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translesion error-prone DNA polymerase V
                     autoproteolytic subunit"
                     /protein_id="HAY8827910.1"
                     /translation="MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLL
                     IQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR
                     PTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR"
     gene            624..1891
                     /locus_tag="JNZ57_001657"
                     /pseudo
     CDS             624..1891
                     /locus_tag="JNZ57_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415702.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
     gene            complement(1937..2467)
                     /gene="dsbB"
                     /locus_tag="JNZ57_001658"
     CDS             complement(1937..2467)
                     /gene="dsbB"
                     /locus_tag="JNZ57_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbB"
                     /protein_id="HAY8827911.1"
                     /translation="MLRFLNQCSQGRGAWLLMAFTALALELTALWFQHVMLLKPCVLC
                     IYERCALFGVLGAALIGAIAPKTPLRYVAMVIWLYSAFRGVQLTYEHTMLQLYPSPFA
                     TCDFMVRFPEWLPLDKWVPQVFVASGDCAERQWDFLGLEMPQWLLGIFIAYLIVAVLV
                     MISQPFKAKKRDLFGR"
     gene            complement(2613..4154)
                     /gene="nhaB"
                     /locus_tag="JNZ57_001659"
     CDS             complement(2613..4154)
                     /gene="nhaB"
                     /locus_tag="JNZ57_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter NhaB"
                     /protein_id="HAY8827912.1"
                     /translation="MEISWGRALWRNFLGQSPDWYKLALIIFLIVNPLIFLISPFVAG
                     WLLVAEFIFTLAMALKCYPLLPGGLLAIEAVFIGMTSAEHVREEVAANLEVLLLLMFM
                     VAGIYFMKQLLLFIFTRLLLSIRSKMLLSLSFCVAAAFLSAFLDALTVVAVVISVAVG
                     FYGIYHRVASSRTEDTDLQDDSHIDKHYKVVLEQFRGFLRSLMMHAGVGTALGGVMTM
                     VGEPQNLIIAKAAGWHFGDFFLRMSPVTVPVLICGLLTCLLVEKLRWFGYGETLPEKV
                     REVLQQFDDQSRHQRTRQDKIRLIVQAIIGVWLVTALALHLAEVGLIGLSVIILATSL
                     TGVTDEHAIGKAFTESLPFTALLTVFFSVVAVIIDQQLFSPIIQFVLQASEHAQLSLF
                     YIFNGLLSSISDNVFVGTIYINEAKAAMESGAITLKQYELLAVAINTGTNLPSVATPN
                     GQAAFLFLLTSALAPLIRLSYGRMVWMALPYTLVLTLVGLLCVEFTLAPVTEWFMQMG
                     WIATL"
     gene            4376..5095
                     /gene="fadR"
                     /locus_tag="JNZ57_001660"
     CDS             4376..5095
                     /gene="fadR"
                     /locus_tag="JNZ57_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid metabolism transcriptional regulator
                     FadR"
                     /protein_id="HAY8827913.1"
                     /translation="MVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVT
                     RTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLL
                     SVRTNISTIFIRTAFRQHPDKAQEVLATANEVADHADAFAELDYNIFRGLAFASGNPI
                     YGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHE
                     SGEIWHRMQKNLPGDLAIQGR"
     gene            complement(5147..6679)
                     /locus_tag="JNZ57_001661"
     CDS             complement(5147..6679)
                     /locus_tag="JNZ57_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoVR family protein"
                     /protein_id="HAY8827914.1"
                     /translation="MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTY
                     PHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNP
                     CIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITEC
                     EERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWR
                     TLPKREEEKTVAEARRYPSELQENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQK
                     QTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINP
                     YALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPK
                     VMRDFRFFTVLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLR
                     GDRSLTLRYIPHNRAPLDRGRKEVLKHVHRLWGFDVMLEQQNEDGSVELLERCPPRMG
                     NL"
     gene            7009..8307
                     /locus_tag="JNZ57_001662"
     CDS             7009..8307
                     /locus_tag="JNZ57_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HAY8827915.1"
                     /translation="MRVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANA
                     GQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLDGTQFQLKWMWQMLRNCDTSHYM
                     ENKGRMVRLAEYSRDCLKALRAETNIQYEGRQGGTLQLFRTEQQYENATRDIVVLEDA
                     GVPYQLLESSRLAEVEPALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKF
                     RFNTPVDQLLCDGEQIYGVKCGDEVIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYS
                     LTIPIAQEDGAPVSTILDETYKIAITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMV
                     VRDLYPRGGHVEQATFWTGLRPMTPDGTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQ
                     LLSDLLSGRTPAIPYEDLSVARYSRGFTPSRPGHLHGAHS"
     gene            8375..9376
                     /gene="dadX"
                     /locus_tag="JNZ57_001663"
     CDS             8375..9376
                     /gene="dadX"
                     /locus_tag="JNZ57_001663"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005005651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolic alanine racemase DadX"
                     /protein_id="HAY8827916.1"
                     /translation="MSARPRRTRVVKANAYGHGIERIWSALGATDGFALLNLEEAITL
                     RERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLDIYLKVN
                     SGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISSAMARIEQAAEGL
                     ECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLSSEIIG
                     VQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHAPTGTPVLVDGVRTMTVGTV
                     SMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMCALALRVPVVTV"
     gene            complement(9763..11499)
                     /locus_tag="JNZ57_001664"
     CDS             complement(9763..11499)
                     /locus_tag="JNZ57_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309713.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HAY8827917.1"
                     /translation="MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGML
                     AGVDGVGGIPFDNYPFAYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLI
                     TSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGS
                     NDPMAVFLTITLIAMIQQHESSVSWMFVVDILQQFGLGIVIGLGGGYLLLQMINRIAL
                     PAGLYPLLALSGGILIFALTTALEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAW
                     LAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSVFAGLLPFRGFNLRERV
                     FISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKV
                     VVPPVGRPVSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKETRIAALFRDN
                     QLLHPTGSTRLREGDVLCVIGRERDLPALGKLFSQSPPVALDQRFFGDFILEASAKYA
                     DVALIYGLEDGREYRDKQQTLGEIVQQLLGAAPVVGDQVEFAGMIWTVAEKEDNEVLK
                     IGVRVAEEEAES"
     gene            complement(11594..12508)
                     /gene="ldcA"
                     /locus_tag="JNZ57_001665"
     CDS             complement(11594..12508)
                     /gene="ldcA"
                     /locus_tag="JNZ57_001665"
                     /EC_number="3.4.17.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="muramoyltetrapeptide carboxypeptidase"
                     /protein_id="HAY8827918.1"
                     /translation="MSLFHLIAPSGYSIKQHAALRGIQRLTDAGHQVNNVEVIARRCE
                     RFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLI
                     CGHSDFTAIQCGLLAQGNVITFSGPMLVVNFGADELNAFTEHHFWLALRNKTFTIEWQ
                     GEGPTCQTEGTLWGGNLAMLISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYH
                     AGILPRQKAIILGSFSGSTPNDYDAGYNLESVYAFLRSRLSIPLITGLDFGHEQRTVT
                     LPLGAHAILNNTREGTQLTISGHPVLKM"
     gene            12608..13219
                     /gene="emtA"
                     /locus_tag="JNZ57_001666"
     CDS             12608..13219
                     /gene="emtA"
                     /locus_tag="JNZ57_001666"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309714.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     EmtA"
                     /protein_id="HAY8827919.1"
                     /translation="MKLRWFAFLIVLLAGCSSKHDYMNPPWNAKVPVQRAMQWMPISQ
                     KAGAAWGVDPQLITAIIAIESGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWSGEP
                     TTSELKNPERNISMGAAYLNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSD
                     RKKAISKINDLDADEFLDHVARNHPAPQAPRYIYKLEQALDAM"
     gene            complement(13221..13955)
                     /locus_tag="JNZ57_001667"
     CDS             complement(13221..13955)
                     /locus_tag="JNZ57_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar brake protein"
                     /protein_id="HAY8827920.1"
                     /translation="MSHYHEQFLKQNPLAVLGVLRDLHKAAIPLRLSWNGGQLISKIL
                     AITPDKLVLDFGSQAEDNIAVLKAQHITITAETQGAKVEFTVEQLQQSEYLQLPAFIT
                     VPPPTLWFVQRRRYFRISAPLHPPYFCQTKLADNSTLRFRLYDLSLGGMGALLETAKP
                     AELQEGMRFAQIEVNMGQWGVFHFDAQLISISERKVIDGKNETITTPRLSFRFLNVSP
                     TVERQLQRIIFSLEQEAREKADKVRD"
     gene            14156..14410
                     /locus_tag="JNZ57_001668"
     CDS             14156..14410
                     /locus_tag="JNZ57_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HAY8827921.1"
                     /translation="MGIIAWIIFGLIAGIIAKLIMPGRDGGGFFQTCILGIVGAVVGG
                     WLATMFGIGGSISGFDLHSFLVAVVGAILVLGVFRLLRRE"
     gene            14589..15029
                     /locus_tag="JNZ57_001669"
     CDS             14589..15029
                     /locus_tag="JNZ57_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827922.1"
                     /translation="MIQKINILDSSQSGVKNGADSEAVLAALIEHLELINPSGRLSQN
                     TRSAMLQLREEEWSEFFFWLLNSLECLDYVIINLTPESKKTLMSEHRNNIQVAIDALY
                     RQRRCKSPGDDSETLTRRNDAIFGNHVWQTFAQYFPPGLEKPSV"
     gene            complement(15108..16453)
                     /gene="treA"
                     /locus_tag="JNZ57_001670"
                     /pseudo
     CDS             complement(15108..16453)
                     /gene="treA"
                     /locus_tag="JNZ57_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001420363.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalase TreA"
     gene            16418..16840
                     /locus_tag="JNZ57_001671"
     CDS             16418..16840
                     /locus_tag="JNZ57_001671"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827923.1"
                     /translation="MAQIKSALVLLHPIISGSLFGTASAKVFWSGKSLAFCTSLNSGP
                     NKISGGCGVTGVSSACTDSAAKHKKIQAGINAIFCGREGAGDFINHSPLAKPNKTVFK
                     YQKTLVQDRTSCMIEISFCELSGILEKGIKGINNGEIE"
     gene            complement(17000..18418)
                     /gene="dhaM"
                     /locus_tag="JNZ57_001672"
     CDS             complement(17000..18418)
                     /gene="dhaM"
                     /locus_tag="JNZ57_001672"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415716.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaM"
                     /protein_id="HAY8827924.1"
                     /translation="MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNP
                     IGTDAVKVMEAIESVADADHVLVMMDMGSALLSAETALELLAPKIAAKVRLCAAPLVE
                     GTLAATVSAASGADIDKVIFDAMHALEAKREQLGLPSSDTEISDTCPAYDEEARSLAV
                     VIKNRNGLHVRPASRLVYTLSTFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLI
                     AKGPEAEEALIAFRQLAEDNFGETEEVAPPTLRPVPPVSGKAFYYQPVLYTVQAKSTL
                     TVEEEQDRLRQAIDFTLLDLMTLTAKAEASGLDDIAAIFSGHHTLLDDPELLAAASEL
                     LQHEHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHLTQTKEELPQ
                     FNSPTILLAENIYPSTVLQLDPAVVKGICLSAGSPVSHSALIARELGIGWICQQGEKL
                     YAIQPEETLTLDVKTQRFNRQG"
     gene            complement(18429..19061)
                     /gene="dhaL"
                     /locus_tag="JNZ57_001673"
     CDS             complement(18429..19061)
                     /gene="dhaL"
                     /locus_tag="JNZ57_001673"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase ADP-binding subunit
                     DhaL"
                     /protein_id="HAY8827925.1"
                     /translation="MSLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNR
                     GFSKVVEKLPAIADKDIGFILKNTGMTLLSSVGGASGPLFGTFFIRAAQATQARQSLT
                     LEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASS
                     IAESAAQSTITMQARKGRASYLGERSIGHQDPGATSVMFMMQMLALAAKE"
     gene            complement(19033..20142)
                     /gene="dhaK"
                     /locus_tag="JNZ57_001674"
     CDS             complement(19033..20142)
                     /gene="dhaK"
                     /locus_tag="JNZ57_001674"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000733719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HAY8827926.1"
                     /translation="MKKLINDVQDVLDEQLAGLAKAHPSLTLHQDPVYVTRADAPVAG
                     KVALLSGGGSGHEPMHCGYIGQGMLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLI
                     IKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGRRGVANTVLIEKLV
                     GAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIH
                     GEPGIDRRSFSSLDQTVDEMFDTLLGNGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGD
                     RVIALVNNLGATPLSELYGVYNRLTTRCQQAGLTIERNLIGAYCTSLDMTGFSITLLK
                     VDDETLALWDAPVHTPALNWGKLGESNVTEQNSNC"
     gene            20361..22289
                     /gene="dhaR"
                     /locus_tag="JNZ57_001675"
     CDS             20361..22289
                     /gene="dhaR"
                     /locus_tag="JNZ57_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase operon
                     transcriptional regulator DhaR"
                     /protein_id="HAY8827927.1"
                     /translation="MRDMSGAFNNDGRGISPLIATSWERCNKLMKRETWSVPHQAQGV
                     TFASIYRRKKAMLTLGQAALEDAWEYMAPRECALFILDETACILSRNGDPQTLQQLSA
                     LGFHDGTYCAEGIIGTCALSLAAISGQAVKTMADQHFKQALWNWAFCATLLFDSKGRL
                     TGTIALACPVEQTTAADLPLTLAIAREVGNLLLTDSLLTETNRHLNQLNALLESMDDG
                     VISWDEQGNLQFINAQAARVLRLDATASQGRAITELLTLPAVLQQAIKQAHPLKHVEA
                     TFESQHQFIDAVITLKPIIETQGTSFILLLHPVEQMRQLMTSQLGKVSHTFAHMPQDD
                     PQTRRLIHFGRQAARSSFPVLLCGEEGVGKALLSQAIHNESERAAGPYIAVNCELYGD
                     AALAEEFIGGDRTDNENGRLSRLELAHGGTLFLEKIEYLAVELQSALLQVIKQGVITR
                     LDARRLIPIDVKVIATTTADLAMLVEQNRFSRQLYYALHAFEITIPPLRMRRGSIPAL
                     VNNKLRSLEKRFSTRLKIDDDALARLVSCAWPGNDFELYSVIENLALSSDNGRIRVSD
                     LPEHLFTEQATDDVSATRLSTSLSFAEVEKEAIINAAQVTGGRIQEMSALLGIGRTTL
                     WRKMKQHGIDAGQFKRRV"
BASE COUNT         5588 a         5556 c         5823 g         5446 t
ORIGIN      
        1 cttctattct atttttttgc cgggtgatat ttttcatttc tgctggatga gcgtcgtcgc
       61 cagaaggcca cgtgagcaca ggataagaga acgaaaaatc agcagtctat acagcgacaa
      121 atattgatag cctgaatcag tattgatctg ctggcaagaa tagactactg tatataaaaa
      181 cagtataact tcaggcagat tattatgttg tttatcaagc ctgcggatct ccgcgaaatt
      241 gtgacttttc cgctatttag cgatcttgtt cagtgtggct ttccttcacc ggcagcagat
      301 tacgtcgaac agcgcatcga tctgaatcaa ctgttgatcc agcatcccag cgcgacttac
      361 ttcgtcaaag caagtggtga ttctatgatt gatggtggaa ttagtgacgg tgatttactg
      421 attgtcgata gcgctattac cgccagccat ggtgatattg tcatcgctgc tgttgacggc
      481 gagtttacgg tgaaaaaatt gcaactacgc ccgacggtac agcttattcc catgaacagt
      541 gcgtactcgc ccattaccat cagtagcgaa gatacgctgg atgtctttgg tgtggtgatc
      601 cacgtcgtta aggcgatgcg ctgatgtttg ctctctgtga tgtaaacgcg ttttatgcca
      661 gctgtgagac ggtgtttcgc cctgatttat ggggtaaacc ggtggttgtg ctatcgaata
      721 atgacggttg cgttatcgcc cgaaacgctg aggcaaaggc gctgggtgtt aaaatgggcg
      781 atccttggtt caaacaaaaa gatctgtttc gtcgctgtgg tgtggtttgc tttagcagca
      841 attatgagct ttacgcagac atgagcaatc gggtgatgtc gacgctggaa gaactatcgc
      901 cccgcgtcga gatttacagt attgatgagg cattctgcga tctgacaggt gtgcgtaatt
      961 gtcgcgatct gactgatttt ggcagagaaa ttcgcgcaac ggtgctacaa cgtacccatc
     1021 ttactgttgg tgtggggatc gcccagacca aaacgctggc taagcttgcc aatcatgcgg
     1081 caaaaaaatg gcagcggcag acgggggggt ggtggattta tcaaatctgg aacgccagcg
     1141 taaattaatg tctgctctcc ccgtggatga cgtctggggg attggacggc ggatcagcaa
     1201 aaaactggac gcgatgggga tcaaaaccgt tcttgatttg gcggatacag atatccggtt
     1261 tatccgtaaa cattttaatg tcgtgctcga aagaacggtg cgtgaactgc gcggtgaacc
     1321 ctgtttgcta ctggaagaat ttgcaccgac aaagcaggaa attatctgtt cccgctcgtt
     1381 tggtgaacgt atcacggatt atacgtcgat gcggcaggcc atttgtagtt acgctgcccg
     1441 ggcggcggaa aaacttcgca gtgagcatca atattgtcgg tttatctcca catttattaa
     1501 gacgtcacca tttgcgctca atgaacctta ttacggcaat agcgcgtcgg taaaactgct
     1561 gacgcccact caggacagca gggatatcat taacgccgct acgcgatctc tggatgccat
     1621 ctggcaagcg ggccatcgct accaaaaagc gggcgtgatg ctgggggatt tcttcagtca
     1681 gggagtcgcg cagctcaatt tattcgatga caacgcaccg cgccccggga gtgagcaatt
     1741 gatgacggta atggatacac tgaatgctaa agagggcaga ggaacactct attttgccgg
     1801 gcaggggatc caacaacaat ggcagatgaa gcgagccatg ctttcaccac gttatacaac
     1861 gcgaagttct gatttactgc gggtcaaata aatatagcgg caggaaaaaa gcgctcccgc
     1921 aggagcgccg aatggattag cgaccgaaca gatcacgttt tttcgcttta aacggctggg
     1981 aaatcatcac cagcaccgcg acaatcaggt aagcgataaa aataccgagc agccactgcg
     2041 gcatttccag acctaaaaaa tcccactgac gctcggcgca atcgccagag gcgacaaaca
     2101 cttgcggcac ccatttatcc agcggcagcc attccgggaa acgaaccata aaatcacagg
     2161 tggcaaacgg cgaaggatag agctgaagca tggtgtgctc gtaagttaac tgcacaccgc
     2221 ggaacgcact atacaaccag ataaccatcg ctacataacg cagcggagtt ttcggggcga
     2281 tcgcgccaat cagcgcagca cccagaacgc cgaataacgc gcagcgttca taaatacaga
     2341 gcacgcaagg tttcagtaac atcacatgct ggaaccacag cgccgtcagt tccagtgcca
     2401 gagcagtaaa cgccatcaac agccacgcgc cccggccttg tgaacattgg ttcaaaaatc
     2461 gcaacataat catttccctg caatatgcat agagtgcgca gtttaaacca attcattcgc
     2521 tgcgccacca ggaggcagca aaaataggac gcaattggac aattatcggg cgaaaaggca
     2581 aaccgggcat ttatatgccc ggtaagttgt tatcaaagcg ttgctatcca gcccatttgc
     2641 ataaaccatt cggttacagg ggcaagcgta aactcgacgc agagcagccc gacgagtgtc
     2701 aggacgaggg tgtaaggcag ggccatccac accatgcggc cataagagag gcgaatcaat
     2761 ggcgcgagtg cagaggtcag caggaacagg aacgcagcct gaccgttcgg cgtagcgaca
     2821 gagggcagat tggtaccggt attaatggcg accgccagca gctcgtattg cttcaacgtg
     2881 atagcgccac tttccattgc cgctttcgct tcgttgatat aaatcgtccc cacgaagacg
     2941 ttatccgaaa tggatgacag caggccgttg aaaatataga acaacgacag ctgagcatgt
     3001 tccgatgcct gcaacacaaa ctgaataatc ggcgaaaaca gttgttggtc gataatcacc
     3061 gcgactaccg agaaaaacac cgtcaacagt gcggtgaatg gcagagattc ggtgaaggct
     3121 ttaccgatag catgttcatc ggtgacaccg gtcaatgatg tcgccagaat aatgaccgac
     3181 aaaccaatca agccaacctc cgccagatgc aacgccagcg cagtcaccag ccagacgccg
     3241 ataatcgcct ggacaatcag acggatttta tcctgacggg tacgctggtg gcggctttga
     3301 tcgtcaaact gttgcaacac ttcgcggact ttctccggca gcgtttcacc gtagccaaac
     3361 caacgcagct tctctaccag caggcaggtt aacaggccac aaatcagaac cggaacggtc
     3421 accggcgaca tgcgcaggaa gaaatcgcca aaatgccagc cagccgcttt agcgatgatc
     3481 aggttctgtg gttcgcccac catggtcatt acgccgccta atgcggtgcc gacaccggca
     3541 tgcatcatca ggctacgcag aaagccacgg aactgttcca gaaccacttt gtaatgcttg
     3601 tcgatatgac tatcgtcttg caggtcggta tcttcagtac gggaagaggc tacgcggtga
     3661 taaataccat aaaaaccgac tgcaacgctg atcaccaccg ccacgacggt taaggcatcg
     3721 aggaacgcgg agaggaacgc cgccgccacg caaaaagaga gcgacagcag cattttggaa
     3781 cgaatgctta acagcaaacg ggtaaatatg aacagcaata gctgtttcat aaaatagata
     3841 cccgccacca taaacatcag taacagcaag acttcaagat ttgccgccac ctcttcacgg
     3901 acgtgttccg cgctggtcat gccgatgaat accgcttcaa tagccaacag accaccgggg
     3961 agtagcgggt agcatttcag ggccatcgcc agagtgaaaa taaattccgc taccagcaac
     4021 cagccagcga cgaaagggct gatgaggaaa attaacggat ttacgattaa gaaaatgatg
     4081 agggcgagtt tgtaccagtc gggggactgg cccaaaaaat tgcgccatag cgcgcggccc
     4141 caggagatct ccatgatggt ttcccttacc ttacaaataa tcaatgatgt ttttatgttt
     4201 aaacgcaaag cttaacggtc aggcaggagt gaggcaagtc ttgatagtca aggggaaaga
     4261 gatgcggaaa atgaagcctt gatccctttt ttcttctttt tgtctgctat cagcgtagtt
     4321 agccctctgg tatgatgagt ccaactttgt tttgctgtgt tatggaaatc tcactatggt
     4381 cattaaggcg caaagcccgg cgggtttcgc ggaagagtac attattgaaa gtatctggaa
     4441 taaccgcttc cctcccggga ctattttgcc cgcagaacgt gaactttcag aattaattgg
     4501 cgtaacgcgt actacgttac gtgaagtgtt acagcgtctg gcacgagatg gctggttgac
     4561 cattcaacat ggcaagccga cgaaggtgaa taatttctgg gaaacctctg gtttaaatat
     4621 ccttgaaaca ctggcgcgac tggatcacga aagtgtgccg cagcttattg ataatttgct
     4681 gtcggtgcgt accaatattt ccactatttt tattcgcacc gcgtttcgtc agcatcccga
     4741 taaagcgcag gaagtgctgg ctaccgctaa tgaagtggcc gatcacgccg atgcctttgc
     4801 cgagctggat tacaacatat tccgcggcct ggcgtttgct tccggcaacc cgatttacgg
     4861 tctgatcctt aacgggatga aagggctgta tacgcgcatt ggtcgtcact atttcgccaa
     4921 tccggaagcg cgcagtctgg cgctgggctt ctaccacaaa ctgtcggcgt tgtgcagtga
     4981 aggcgcgcac gatcaggtgt acgaaacagt gcgtcgctat gggcatgaga gtggcgagat
     5041 ttggcaccgg atgcagaaaa atctgccggg tgatttagcc attcaggggc gataatccct
     5101 tccgtttaaa aagcaaaccc ctcaaacgag gggttttttg ttgtttttac agatttccca
     5161 ttcttggcgg gcaacgttcc agcaactcga cgctgccatc ttcgttttgc tgttccagca
     5221 tcacatcaaa tccccacagg cgatgcacat gcttcagcac ttctttgcgc ccccgatcca
     5281 gcggtgcgcg attatgtgga atgtaacgca gcgtcagcga acggtcaccg cgcaaatcca
     5341 cgttccagat ctgaatattc ggctccagat tacttaagtt atattgcgac gataaccggt
     5401 tacggatctc ccgataacct tcttcattat gaatagcgga aatctccaga taattatgcc
     5461 gatcgtcatc cagcacggtg aagaagcgga aatcacgcat cactttcggt gacagaaact
     5521 ggctgataaa actctcatct ttgaaatcac gcatcgcgaa atgcagcgtt tccagccagt
     5581 cggaaccggc gatatccggg aaccagtatt tgtcttcttc cgttggcgac tgacaaatcc
     5641 gtttaatatc ctggaacatg gcgaacccga gggcatacgg gttgatgccg ctgtaccacg
     5701 ggctgttata ggggggctgg aagaccacat tggtgtggct gtgcaaaaac tccagcataa
     5761 aacgttccgt tactttccct tcatcataca gatggttaag gatggtgtag tgccagaagg
     5821 tggcccagcc ttcgttcatc acctgagtct gtttttgcgg ataaaaatac tggctcacct
     5881 tacgcacaat acgcaggatt tcacgctgcc atgattccag cagtggcgca tttttctcca
     5941 taaaatagag caggttttct tgtagttcgg acggatagcg gcgcgcttca gcaaccgttt
     6001 tctcttcctc gcgcttcggc agggtacgcc agagcatatt gacctgactt tgtagatact
     6061 cttcgcgact tttctgccgg gctttctctt cttgcagcga gattttttgc gggcgtttgt
     6121 accggtccac gccgtagttc atcagcgcgt ggcacgagtc cagaagccgt tctacttcat
     6181 ccacgccata acgttcttcg cactcggtaa tatatttacg ggcaaaaatc agataatcga
     6241 caatcgaact ggcgtcggtc caactgcgga ataagtaatt gtttttaaag aaagagttat
     6301 gcccatagca ggcgtgtgcc atcaccagcg cttgcatggt aatggtgttc tcttccatca
     6361 ggtaagcgat acacgggtta gagttaatga cgatttcata ggccagtcct tgctgaccgt
     6421 gcttatacag ccgttcagtc tcgataaact ttttaccgaa tgaccagtgc ggatagttaa
     6481 ttggcatgcc gacgctggag taggcatcca tcatctgttc tgaggttatc acttcaatct
     6541 ggtgcgggta ggtatccagc cggtagagtt tcgccacccg gtctatctct gccagataaa
     6601 catccagcag gtcgaacgtc cagtcgggtc catcgctcaa ccgtgtggtg tccttattca
     6661 tagaatcgat cgtcgccata cgcgcacctc attgttgtcg gcgctctctg tgtggagcac
     6721 ctcatttcaa gcatagaaca cctgttaaaa accgcgtcgc cggagaattt ttttctttgc
     6781 gatttcttat tatcagagtg ccactaatcc gcttctgaac ggaattttat gctggataaa
     6841 aagggcgttc agcaggagat actaaagacg ccatattgcc gcagagtcag ggagatgtga
     6901 gccagctcac cataaaaaag ctgtatgttg aataatattt tcaactgagt tatcaagatg
     6961 taattagatt attattcttt tactgtatct accgttatcg gagtggctat gcgagttgtc
     7021 atactgggaa gtggtgtggt aggcgttgcc agcgcctggt acttaaatca ggcaggacat
     7081 gaggtcaccg tcattgatcg ggagccgggg gccgccctgg aaaccagcgc cgcgaatgcc
     7141 gggcaaatct cccccggata tgctgcaccg tgggcggcac caggtgtgcc tttaaaagcg
     7201 atcaaatgga tgttccagcg ccatgcgccg ctggcggttc gtctcgacgg tacgcagttt
     7261 cagttgaaat ggatgtggca aatgttacgt aactgcgaca ccagccacta catggaaaac
     7321 aaagggcgga tggtgcgtct ggcggaatac agccgtgatt gcctgaaagc attgcgcgcc
     7381 gaaaccaata ttcagtatga agggcgtcag ggtgggacgc tgcaactgtt ccgtaccgaa
     7441 caacagtatg aaaatgcgac ccgcgatatc gtcgtgctgg aagatgccgg cgtaccgtat
     7501 cagctgctgg aatccagccg cctggcggaa gtggagccag cgctggcaga agtagcgcac
     7561 aaactgacgg ggggtctgca actgcccaat gatgaaaccg gagactgcca gctgtttacc
     7621 cagaatctgg cgcggatggc agagcaggcg ggggttaaat tccgctttaa tacgcccgtt
     7681 gaccaactgc tttgcgacgg cgagcaaatc tacggcgtga agtgtggcga tgaagtgatt
     7741 aaggccgatg cgtatgtgat ggcgtttggt tcttactcga cggcgatgct caaaggcatt
     7801 gttgatattc cggtgtatcc gctgaaaggc tactcgctga ctattccaat tgcgcaggaa
     7861 gatggtgcgc cagtatccac cattcttgat gaaacctaca aaatcgccat tacccgtttc
     7921 gataaccgca ttcgtgttgg cggaatggcg gaaattgttg gttttaacac cgagctgttg
     7981 caaccgcgtc gtgaaacgct ggaaatggtg gttcgcgatc tctatccacg cggcggtcat
     8041 gtcgagcagg cgactttctg gacgggtttg cgcccgatga cgccagacgg tacgccggtt
     8101 gtcgggcgta cacgctttaa aaatctgtgg ctgaataccg gtcacggcac gctcggctgg
     8161 acgatggctt gcggttccgg tcagttgtta agcgatctgc tctctggtcg cacgccagcg
     8221 atcccatatg aggatctaag cgtagcgcgc tacagccgtg gatttacgcc atcacgtccg
     8281 ggccatttac atggcgcaca cagctaagga aacgagatga cccgtccgat acaggccagc
     8341 ctcgatctgc aggcattaaa acagaatctg tccattgtcc gccaggccgc gccgcacgcg
     8401 ggtggtaaaa gcgaacgctt acgggcatgg tattgagcgt atctggagcg cgctcggggc
     8461 caccgatggc tttgcattac ttaacctgga agaggcaata acgttacgtg agcgcggctg
     8521 gaaggggccg atcctgatgc tggaaggatt tttccatgct caggatctgg agatttatga
     8581 ccagcaccgc ctgaccacct gcgtacacag caactggcag ctcaaagcac tgcaaaatgc
     8641 gcggctaaaa gcaccgttgg atatttatct taaagtgaac agtgggatga atcggttggg
     8701 cttccagccc gatcgcgtgc ttaccgtctg gcagcagttg cgggcaatgg cgaatgttgg
     8761 cgagatgacc ctgatgtcgc attttgccga agcggaacat cctgatggaa tttccagcgc
     8821 gatggcgcgt attgagcagg cggcggaagg gctggagtgt cggcgttcgt tgtccaattc
     8881 ggcggcgact ctgtggcatc cggaagcgca ttttgactgg gttcggcctg gcattatttt
     8941 gtatggcgct tcgccgtccg gtcagtggcg tgatatcgcc aataccggat tacgtccggt
     9001 gatgacgcta agcagtgaga ttattggtgt ccagacgcta aaagcgggtg agcgtgtggg
     9061 ctacggcggt cgctatactg cgcgcgatga acagcgaatc ggcattgtcg ccgcagggta
     9121 cgccgacggt tatccgcgcc acgcgcctac cggtacccct gttttagtgg acggcgtgcg
     9181 caccatgacg gtggggaccg tctcgatgga tatgctggcg gtcgatttaa cgccttgccc
     9241 gcaggcgggt attggtacgc cggttgagct gtggggcaag gagatcaaaa ttgatgatgt
     9301 cgccgccgct gccggaacgg tgggctatga gttgatgtgc gcgctggcgc tacgcgtccc
     9361 ggttgtgacg gtgtaacttg ttgtaagccg gatcgtaggc aacgtcttct gggtgcaaaa
     9421 aaaatcatcc atccggctgg tcagcaactg tagttgttaa tgtgacagag ccattgccca
     9481 tgatagtgtc cattaaaagg atggacacta tttccccgga acctgaactc accgcacagg
     9541 ggttctacat aaaacgctta cgcttcattg ttgactcgga gtcgacttca gataaatcac
     9601 gctttaccct tgatggagcc tgtacataga tttgtgtaat tgcctgattt tgatatgttc
     9661 aattcaacat caaatgaagg ttaaattatg gacgacaaac aattgcaggc tcaggctgcg
     9721 ttcagcaaag catcgcaacc ggcgatagat gcttcattaa atttaagatt cagcttcctc
     9781 ttcagccacc cgtacgccaa tcttcaacac ttcattatct tctttctcgg ccaccgtcca
     9841 gatcatcccg gcaaactcta cctggtcacc gacaaccggt gccgcgccta acaactgctg
     9901 gacaatttca cccagcgttt gctgcttatc acgatattct cgcccgtctt ccaggccata
     9961 tatcagcgca acatcagcat atttggcgct ggcttcgaga atgaagtcac caaagaagcg
    10021 ttgatccagc gcgaccggcg gcgactggct gaacagttta ccgagcgccg gaagatcgcg
    10081 ttcccgacca attacacaca acacatcgcc ttcgcgcagt cgggtgctgc cggtaggatg
    10141 aagcaactgg ttatcacgaa acagtgccgc aatacgcgtc tcttttggca tatgcaaatc
    10201 gcgcagtgcc gcgcccacgc accatttatc ggcactcaat tgataaacaa actgctccca
    10261 cggattttcc ggatgaatat ccaggccaac gcgtgacacc ggacgtccca ctggcggaac
    10321 caccactttg gcttttttag ccgcccacga gagtgatgtt ccctgcaaga gcagtgaaac
    10381 cagaaccaca aagaaggcga cattaaagaa cagacgtgca ttctccagcc ccgccatcat
    10441 cgggaacacg gccaggatga ttggcaccgc gccgcgtaat cctacccagc tgataaacac
    10501 gcgctcacgc agattgaaac cgcggaaggg gagcaatcca gcaaataccg aaaggggacg
    10561 ggcgaagaat atcatccatg ccgacaaaat gagcgccgga atggcaatag gcagcagatc
    10621 gcttgggtta accaatagcc ccagcaccag gaacatggcg atttgcgcca gccaggcgag
    10681 gccgtcgaaa ttttgcagga tgccgtagcg gttgcgaatc ggccgattac ccagcagaaa
    10741 accgcacaga taaacagcca gaataccgct gccttccagc gccgtggtta aagcaaaaat
    10801 taaaataccg ccgcttaatg ccagcaatgg atataatccg gcaggcaggg cgatgcgatt
    10861 aatcatttgc agcagtaaat aaccaccgcc aagtccgatg acaatcccga ggccaaattg
    10921 ctgcagaata tcgaccacga acatccaact gacactgctt tcatgttgct ggatcatcgc
    10981 aatcagggta atcgtcagaa agaccgccat tggatcatta ctgccggatt caatttccag
    11041 cgtcgagcca acacgttcgt taagcccctt accgcccagc agagaaaaga ccgctgcagc
    11101 atcggtagag ccgacgatag cgccgattaa taagccttca atcaaatcaa gattaaacag
    11161 ccacgccgcc atcatgccgg ttaaaccaga ggtgataagc acgcccagcg tcgccagcga
    11221 cagtgccggt cctaacgcca cacgaaagga actggcctga gtgcgcatcc cgccgtcgag
    11281 caaaataatc gccagtgcca ggttacttac catgtaggcg aaggggtaat tatcaaacgg
    11341 gataccgccg acgccatcga ctcctgccag catgccgatc gccagaaaaa taaccagaat
    11401 aggaatgcca agacgggaag aaaatgaact aagtaatata ctgctggtga caaggatgga
    11461 tcctaagatg aaaaggctaa ttattgttgt ggcatccaac ggtcggttac tcctgattac
    11521 gctgtctctt atataaaccc taccatatta gcggcagaga cagcgtttta cttagccctg
    11581 aagcgtgatt tttttacatt ttaagaacag gatgaccgct aatcgtcaac tgagtgcctt
    11641 cccgggtgtt attcagaatg gcatgtgcgc ccaacggcag cgtaaccgtg cgttgttcat
    11701 gaccaaaatc gaggccggta atgagtggaa tcgacaggcg ggaacgcaaa aacgcgtaca
    11761 ctgactccag gttgtaacct gcgtcataat cattgggcgt gctgccgcta aagctaccga
    11821 gaataatcgc cttctgacgt ggcaaaattc ccgcatgata gagctgcaac agcatacgtt
    11881 cgacgcggaa agggtgctcg ttaatatctt ccagtaccag gataccgttc tcaatttttg
    11941 gcatccacgg tgtaccaatc agtgaaatca gcatcgcaag attgcctccc cacaacgtgc
    12001 cttcggtctg acatgtcggg ccttcccctt gccattcaat ggtgaaggtt ttattgcgta
    12061 acgccagcca gaaatggtgc tcggtaaagg cgttcagttc atccgcacca aagtttacta
    12121 ccagcatggg gccgctaaag gtgatgacat tgccttgcgc cagaagaccg cactgaatgg
    12181 cggtaaaatc gctatgtccg caaatgagta acgggtcatg ttgttggcga gccaccagtg
    12241 cctgccagtc aatatctgcc agtaaacgac tggcaccgta accgccgcgt acagccagca
    12301 cgatggtgtt gggtgtagtc agtctggcaa gggaattgag atcttccaga cgctccgttt
    12361 ccgtacccgc aaaacgctca caacgacggg caataacctc gacgttattg acttgatgcc
    12421 ccgcgtcggt aaggcgctgg ataccacgca gcgcggcgtg ctgtttaatg ctgtaacccg
    12481 atggggcaat taagtgaaac agagacatgg caattccttg ctgacaacag aaacgaaatg
    12541 tatatcatgc cgcttaggtg tgccgttgtc acctcaacgg cgattccagg ctataaggat
    12601 agaagaagtg aaattgagat ggtttgcctt tttgattgtg ttattagcgg gttgttcatc
    12661 aaagcatgac tatatgaacc cgccgtggaa cgcgaaagtt ccggtgcaac gtgcgatgca
    12721 gtggatgcca ataagccaga aagccggtgc agcctggggc gtcgatccac aattgatcac
    12781 ggcgattatc gctatcgaat cgggtggtaa tccgaacgcg gtgagtaaat cgaatgccat
    12841 tggtttgatg cagttaaaag cttcaacctc cggacgtgat gtttatcgcc gtatgggctg
    12901 gagtggtgag ccgacgacca gcgagctgaa aaatccagag cgtaatattt caatgggggc
    12961 ggcttacctg aatattctgg aaaccggccc gctggcaggc attgaagatc cgaaggtact
    13021 gcaatatgcg ctggtggtgt catacgctaa cggggcaggt gcgctgctac ggactttctc
    13081 gtcagatcgg aaaaaggcga tcagcaaaat caacgatttg gatgctgacg agttcctcga
    13141 tcacgtagcg cgcaatcatc ctgcgccgca ggctccgcgc tatatctaca aacttgagca
    13201 ggcactggac gcgatgtaaa tcagtcgcgt actttgtccg ctttctcccg ggcttcctgc
    13261 tcgagagaga aaataatccg ttgtaattgc cgctccaccg tcgggctgac gttaagaaaa
    13321 cggaagctca gacggggagt ggtgatggtt tcattcttgc catcaatcac tttgcgctcg
    13381 ctgatggaga ttaactgggc gtcaaagtga aaaacacccc attgccccat gttgacttca
    13441 atctgagcga agcgcatgcc ttcttgtaat tcggcaggct ttgctgtttc cagtaatgcg
    13501 cccatgccgc ctaacgacaa atcatacagg cggaaacgta acgtactgtt atccgccagt
    13561 ttggtctggc aaaaataagg cggatggagt ggggcggaga tgcggaaata tcggcgtcgt
    13621 tgtacaaacc ataaggtggg aggcggtacg gtaataaatg ccggaagctg caagtattca
    13681 ctctgctgta gttgttcaac agtaaactcg actttcgcac cctgagtttc ggcggtaatg
    13741 gtaatatgct gcgcctttag cacggcgatg ttgtcttcgg cttgactgcc gaaatccagc
    13801 accagtttat ccggggttat tgccagtatt ttgctgatca gctgcccgcc attccaactg
    13861 agacgcaaag gaattgcggc tttgtgcaaa tcgcgtaaca cgcccaggac ggctaacgga
    13921 ttttgtttca ggaactgctc atggtaatga ctcacgcgga aaaactcctg actgacaaac
    13981 tgtctttggt ttatcggtca cagttaacaa aacttaatac aaatgcgtga atatttttta
    14041 catgttgttc ttaaatcagc cgacatacgc ccagcatcga tcccgccctt gcctatactt
    14101 agagcgttga cgtaagcatt tcttgcgtcc gattcatcga aacgagggcc tgaacatggg
    14161 aattattgcc tggattattt ttggcctgat agccggcatt atcgccaagc taatcatgcc
    14221 ggggcgtgat ggtggtggat ttttccagac ctgtattctc gggatagtcg gtgcggtggt
    14281 cggcggctgg ctggcgacca tgtttggcat tggcggctcc atcagcggtt ttgatttgca
    14341 cagcttcctg gtggcggtgg tgggagctat tctcgttctg ggcgtattcc gcctgctgcg
    14401 aagagaataa gattttcata aggcggatag cgatacagat gccgctatcc gcttttcaca
    14461 tcagaacgta tattcgacac ctgctttacg ggtgaaaaaa atcaatatag cacttcgata
    14521 tccgataaag tcggttcccg gtaacaacaa cagaatcctt ttttaattat tgtttcgttg
    14581 tttttggtgt gattcagaaa ataaatattt tagacagtag ccagtcaggc gttaaaaatg
    14641 gggcggatag tgaggcggtt ttggctgcgc ttattgaaca tttagaattg atcaatcctt
    14701 ctggcagatt aagccaaaat acccgttcgg caatgcttca gttacgcgaa gaggaatggt
    14761 ctgaattctt tttttggttg ctaaattctc tggagtgtct ggattatgtg attattaatt
    14821 taactccaga aagcaaaaaa acgttgatga gtgaacaccg taacaatatt caggtagcaa
    14881 tcgatgcttt atataggcaa cgtcggtgta aatcaccggg ggatgatagt gaaacactta
    14941 cccgtagaaa tgacgctatc ttcggcaacc acgtatggca aacatttgcg caatacttcc
    15001 cgccaggact tgaaaaaccg tctgtgtaga aaacaccata gctatggtgt tatctgccga
    15061 caacgccatc cggagaagcc gaatgacgtt gtcggagtaa gcgctggtta aggtgtgggt
    15121 tgtgcctctt tggttgaggg ttgcgtcgtt gctgacttaa cggtcggacg cgtcgccgga
    15181 acattgtcac acggttgctc tttcgggcag atcaaatcca gcattttcag cgtcacgcca
    15241 ttggtccagc caaagccatc ctgtaatgga tattcgccac ctctttttgc ccgttgtttt
    15301 gtaatccttc tgtcgcgacc cactgtaacg gtgcccagcc atttggcgca tcccattgtt
    15361 gcccactttt caccgacgtg gtgttcaggc cgccgggttg cagcagatgt gttttcgtcg
    15421 ccgtcgccat tttgttggcg cgatctttcg ctgccgcatt gacgtacagc gggaacaggg
    15481 cggccgcggt taactgattg cgcactttat gacttttcag gtcgtaatcg gcataccagc
    15541 cttgttgatc gttccacagg tatttttcga ttcctttttg acgggcattc gccagcgttt
    15601 cgtactggtt tgccatcgcg ttatctcctg cagctttgct ggcgcgggcg aggatttttt
    15661 ccattttaaa catcaggctg ttcagatcga ccggtacgat gctggtggtg cgtaaggtat
    15721 ttaactgctg cgggttgtcc atccagcgcg agctgaaatc ccagccagac gcagcggcag
    15781 agcgcaggtc gcggtaaatt tcagtggcag gtcgattcgg attgcttttg gcggtggcaa
    15841 tatcttccac ccatgactct ggtcgtggcg tatcgtgatc gtcccagtag cggttgagaa
    15901 gggtaccatc ctgaagtttg acaacgcgtt tttcctgttg tccggcttgc aggttttcaa
    15961 caccgtccat ccagtaagca tattcttttt gcatttgcgg caggtattgc ttcaacgcgg
    16021 catcgccttc atgctgcgcc agtaactcta ccatcagggc aaagaagggc ggttgcgagc
    16081 ggcttaaata gtaactgcgg ttgccgttgg gaatatgacc gtaagtgtct atttcatgag
    16141 caaaattggc caccatatcc gcgactttat cccagtgacc gctttcggca agtcctaaca
    16201 tggtgaagta actgtcccag taatatacct cgcgaaaacg tccgcccggc acgacataag
    16261 gttccggcag cggtaacaga gaatcccatt tttcggtgtt ttcggtagaa cgcgttaata
    16321 ccggccaaag tccgtcaata tgttcgcgca gtgactgccc ctctggcgga acatatttct
    16381 cgccttcttt cggcagggtg aaattgacgt taacgaaatg gcgcagatca aatccgctct
    16441 ggttttgctg catccgataa tcagcggatc gctgttcggc acggcatcgg caaaggtttt
    16501 ttggtccgga aaaagtttgg cgttttgcac atcattaaac agcggcccta ataaaatatc
    16561 aggcggctgt ggtgttaccg gtgtttcttc tgcctgcacc gatagcgcag cgaaacacaa
    16621 aaagatacag gctggaatta acgccatttt ttgcgggcga gaaggtgcgg gggatttcat
    16681 caatcattct cctttggcga aaccgaataa aacggtattc aagtatcaga aaaccttagt
    16741 tcaggatcgc actagctgca tgatcgaaat ctcattctgc gaactgtcag gcattttaga
    16801 aaagggaatt aaagggataa ataacggcga aatagagtga tcaaataacg tctgtttatt
    16861 agccagccag cggcgttggg ttcgtgatta gcgaagaaaa atcatcataa attggtgaaa
    16921 aatataacag gtagttaaaa accattagtg ctgagtaaat tgccggatga catcagaacg
    16981 atgccatccg aacagtggct taaccctgac ggttgaaacg ttgcgtttta acgtccagcg
    17041 ttagcgtttc ttctggttgt atcgcataca gtttctcacc ctgctggcaa atccagccaa
    17101 tccccagttc acgggcgatt agggcgctgt gggataccgg acttccggcg ctaaggcaga
    17161 taccttttac aaccgccgga tccagttgca gtactgtgga aggataaatg ttctccgcca
    17221 gtagaatagt tggcgagtta aactgcggga gttcttcttt cgtttgggtc aggtggacca
    17281 gggtgcgatg cagaagatcg tccacatcaa tatagcgagc ttgtagatat tcatcatcca
    17341 gttgctggta ttgctggcta agttctttaa gaacttgctg ccaggcatat tctgccgtgc
    17401 aatgttcatg ctgaaggagt tcgcttgccg ccgccagcag ttccggatca tctaacagtg
    17461 tatggtgacc agaaaagatt gcggcaatat cgtcaagccc gctggcttct gctttcgctg
    17521 ttaacgtcat cagatctaat aacgtgaagt caatagcctg gcgtaatcga tcttgttctt
    17581 cttccacggt cagggttgat tttgcctgta ccgtatataa aactggttga taataaaagg
    17641 ctttacccga aacaggcgga acgggacgca gagtaggtgg agcgacttcc tccgtttcac
    17701 caaagttatc ttcagccagc tgacggaaag cgatcagtgc ctcttcagct tctggccctt
    17761 tcgcaatcag gcgcagcgta tcgttatagc gaacttgtag taacgcaatc tggttaatac
    17821 tctctggtgt gacgcatttg ccgttttttt ccagcaacat atcggcatta aatgtcgata
    17881 aggtataaac cagccgggag gccggacgta catgcaggcc gttacggttt tttatgacca
    17941 ccgccagaga acgggcttct tcatcgtacg caggacatgt gtcagagatt tcagtgtcgg
    18001 aggacggtaa acccagttgt tcacgtttgg cttccagcgc atgcatagcg tcaaagataa
    18061 ctttgtcgat atccgctccc gaggccgcgc tgaccgttgc tgccagtgta ccttcgacca
    18121 acggcgcagc acacaaacgt acttttgcgg cgatcttggg agccagcaat tccagcgcag
    18181 tttcagcact caataatgcg ctacccatat ccatcatgac cagcacatgg tcggcatcag
    18241 caacagattc gatggcctcc atcactttga cggcatcggt accaatagga ttttgtggat
    18301 cgtcaattcc cgcggcaatg gcgattttac aactatcact cattaacatc tgacgggcta
    18361 attcaccgac accttctccc agtcggctgc tatgtgaaac tatgaccagg tttaccatca
    18421 ccaattcctt actcttttgc ggctaacgcc aacatttgca tcataaacat caccgaggtc
    18481 gcgccgggat cctggtgacc aatactgcgt tcaccgagat aactggcgcg gcctttgcgg
    18541 gcttgcatcg taatcgtact ttgtgcagcg gattcggcga tgctactggc agcttcgagc
    18601 gccaccggaa cagagagatt ttgctcgctg gactgacgta acgattccac caccggcacc
    18661 cacacatcac acatggtttt atcgccaggt tcggctttcc cgcgactgat tacgccgtcc
    18721 gcgccatcgc ggaacatctg ataaagctct tccagtgtca ggctttgccg tgcctgggtc
    18781 gcctgtgcgg cgcggataaa gaaggtaccg aacagcggac cactggcacc accgacgctg
    18841 gaaagcagcg tcataccggt attcttgaga atgaaaccga tatctttatc tgcgatagca
    18901 gggagttttt ccaccacttt gctaaagcct cggttcatat ttagcccgtg gtcagcgtcg
    18961 ccaatttcgc gatccagtcc ggtaagatac tcgctctcgg tgctgaaaat atcgccacaa
    19021 cgagtgagcc agttaacaat ttgagttctg ctcagtgaca ttgctttctc ctaatttacc
    19081 ccagttaagg gccggggtgt ggaccggggc gtcccagagt gccagcgttt cgtcatcaac
    19141 tttcagtaag gtgattgaga aaccggtcat atccagtgag gtgcagtacg cgccaattaa
    19201 attacgttcg atagtcaatc ccgcttgctg gcaacgtgtg gtcaggcggt tatagacgcc
    19261 gtacagctca gaaagcggag ttgcgccaag attgttaacc agcgcaatca cccgatcgcc
    19321 agactggagc ggttgtttgg tttgttgttc ttcctgccaa ctgccttgtt gataatccca
    19381 gaaacgtaaa gtgcgatggt atgagccatt tcccagcagg gtgtcgaaca tttcatcgac
    19441 ggtttgatca agggaagaga aggagcggcg gtcaataccc ggctcaccat gaatgccgac
    19501 gccaaactcc atctcattat ccgccagggt aaaagaaggt ttgcccgcgg caggaacggt
    19561 acaggcaccg agagcgatac ctattgagtg gccttgatta ttcaacttac gccccagttc
    19621 cgcacaggcg tccagtgagt cgccacgctc cgccgctgcg cctacgagtt tttcaattaa
    19681 tacggtgttg gcaacgccgc gtcgcccggc agtataaaga ctgtctttta ccgcaacgtc
    19741 gtcatcaatg accacagtgg tcacttttac gccgctatcg tgcagtaact cggtcgctgt
    19801 ttcaaagtta agaatatcgc cggtgtaatt tttgataatc aacagtacac cttcgccgcc
    19861 atcaacttgc atggcgcatt caaagatttt atcgggcgtc ggtgaggtga aaatttcgcc
    19921 cggacaggcc cccgaaagca tcccctgacc gatataccca cagtgcatcg gctcgtgtcc
    19981 gctgccgcca cccgacagca gggcgacttt tcctgcaaca ggggcatcag ctcgggtgac
    20041 atacaccgga tcctgatgca gtgtcagcga tggatgcgct ttcgccagtc ctgccagttg
    20101 ttcgtccagt acgtcttgca catcattgat caattttttc attattttgc tccagcaatt
    20161 acggtagggc atggatgatg ttcaacgaca cggcgaccac tgactaccga tgaatccatt
    20221 gtgcatcagg caagggaaaa gaaaattagc ccaaattatg tttcatagtg aaacatatgc
    20281 tttaatgaat gttccatatt gaaactttta cgtgtattaa tacttaaaat tgcgagccgg
    20341 aacacctttt gtcataaggg atgcgggata tgagtggcgc ttttaacaac gatggtcggg
    20401 gcatatctcc cttaattgca acctcctggg agcgatgcaa taagctgatg aaacgggaga
    20461 catggagcgt accacatcag gcccagggcg tgacatttgc ttctatttat cggcgtaaga
    20521 aagcgatgct gacgctcggg caggctgcgc tggaagatgc ctgggaatat atggcaccgc
    20581 gagagtgtgc gctgtttatc ctcgatgaaa ccgcctgcat tctcagccgt aatggcgatc
    20641 cgcaaacctt gcagcagcta agtgcacttg gattccatga cggcacgtat tgcgccgagg
    20701 gaattattgg tacttgtgcg ctatcgttag cggctatctc tggtcaggcc gtgaaaacga
    20761 tggccgatca acatttcaaa caggcactct ggaactgggc cttttgtgca acgctgttgt
    20821 ttgacagcaa gggccgattg acgggaacaa tagcgctggc gtgtccggtt gagcaaacta
    20881 ccgcagctga tttgccgttg acgttggcaa tcgcccgcga ggtcggaaat ttactgctga
    20941 cggacagttt gctcactgaa actaaccgtc atttaaatca acttaatgcc ctgttagaaa
    21001 gtatggatga tggcgtgatt agctgggacg agcagggtaa tttgcaattt atcaatgccc
    21061 aggcggcgcg ggtcttgcgc cttgacgcga cggcaagtca gggacgggca atcactgaac
    21121 tcttaacgtt acccgccgta ttgcaacaag caataaaaca ggcacatccg ctcaaacacg
    21181 tagaagcaac ctttgaaagt cagcatcagt ttattgatgc ggtgataacc cttaaaccga
    21241 taatagaaac gcagggaacc agctttattt tgttgctcca tcctgtggaa cagatgcggc
    21301 agttgatgac cagtcaatta ggaaaagtca gccatacctt tgctcatatg ccacaggacg
    21361 atccgcaaac ccgccgcttg attcattttg gtcgccaggc ggcgcgcagt agctttcctg
    21421 tcctgctttg tggagaagag ggcgtgggca aggcactgct aagtcaggca attcataatg
    21481 aaagcgagcg tgctgcaggt ccttatatcg ccgtcaattg tgagttatat ggtgatgcgg
    21541 cactggcgga agaatttatt ggtggcgatc gtacggacaa tgaaaatggc cgtctgagtc
    21601 ggctggaact ggcgcacggc ggcacgctgt ttcttgaaaa gattgaatat ctggcggtgg
    21661 agttacagtc tgctttgctt caggttatca agcagggtgt tatcacgcga ctggatgcgc
    21721 ggcgtttaat accaattgat gtcaaagtga ttgcaacaac gaccgcggac ctcgcaatgc
    21781 tggtggaaca aaatcgtttt agtcgccagc tgtattacgc gctgcatgca tttgaaatta
    21841 ccatcccgcc tctgcgtatg cggcgtggca gcattccggc gctggtgaat aacaaattac
    21901 gcagtcttga aaaacgcttc tctacgcggc tgaaaattga tgacgatgcc ctcgctcgcc
    21961 tggtttcttg tgcatggcca ggcaacgatt ttgaacttta cagcgtcatc gagaatcttg
    22021 ctctgagtag tgataatggg cgcattcgcg tcagtgattt gccggaacat ctgtttaccg
    22081 agcaggcaac agatgatgtc agcgccaccc gcctttccac cagtctgtca tttgcggaag
    22141 ttgaaaaaga ggcaattatt aacgcagccc aggtcacagg cggtcgcatt caggaaatgt
    22201 cggctttact tggaatcggc cgcactacgc tgtggcggaa aatgaagcaa catggcattg
    22261 atgcagggca gtttaagcgc cgggtatgaa agttctaata catcagagtg atctatattt
    22321 cattccggcg cacgctaaca tttttcagca tcgtttaagg gcttgtctat cacgcactta
    22381 aaagctgaag cgatatcctc cgttgacttg ctt
//
LOCUS       DADMHC010000053        22352 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.053, whole genome shotgun sequence.
ACCESSION   DADMHC010000053 DADMHC010000000
VERSION     DADMHC010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22352)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22352)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22352
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.053"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(44..189)
                     /locus_tag="JNZ57_001676"
                     /pseudo
     CDS             complement(44..189)
                     /locus_tag="JNZ57_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001626279.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytoplasmic protein"
     gene            complement(298..392)
                     /locus_tag="JNZ57_001677"
     tRNA            complement(298..392)
                     /locus_tag="JNZ57_001677"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(356..358),aa:Sec,seq:tca)
     gene            685..2067
                     /locus_tag="JNZ57_001678"
     CDS             685..2067
                     /locus_tag="JNZ57_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside-pentoside-hexuronide family
                     transporter"
                     /protein_id="HAY8827928.1"
                     /translation="MKSEVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPA
                     GFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPD
                     LSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGM
                     LSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTTSMR
                     EDLRDIWQNDQWRIVGLLTIFNILAVCVLGGAMMYYVTWILGTPEVFVAFLTTYCVGN
                     LIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQL
                     VTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDA
                     AEKAQNSATISIIIALFTIVPAICYLLSAIIAKRYYSLTTHNLKTVMEQLAQGKRRCQ
                     QQFTSQEVQN"
     gene            2077..4368
                     /gene="yicI"
                     /locus_tag="JNZ57_001679"
     CDS             2077..4368
                     /gene="yicI"
                     /locus_tag="JNZ57_001679"
                     /EC_number="3.2.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-xylosidase"
                     /protein_id="HAY8827929.1"
                     /translation="MKISDGNWLIQPGLNLIHPLQVFEVEQQDNEMVVYAAPRDVRER
                     TWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAE
                     FKSGNLSARVSKGEFWSLDFLRNGERITGQDTNNQRNYMFERLDLGVGETVYGLGERF
                     TALVRNGQTVETWNRDGGTSTEQAYKNIPFYMTNRGYGVLVNHPQSVSFEVGSEKVSK
                     VQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEAT
                     VNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKIC
                     VWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADK
                     LKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAHIYNELVWNVLKDTVGEE
                     EAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHYIGGFEN
                     TAPAHVYKCWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTQLKCRMMPYLYR
                     EAARANARGTPMMRAMMMEFPDDPAYDYLDRQYMLGDNVMVAPVFTEAGDVQFYLPEG
                     RWTHLWHNDELDGCCWHKQQHSFLSLPIYVRDNTLLALGNNDQRPDYAWHEGTAFHLF
                     NLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRNVVKVNGLQD
                     GSQAESEQGLVVKPQGNALTITL"
     gene            complement(4421..6130)
                     /locus_tag="JNZ57_001680"
     CDS             complement(4421..6130)
                     /locus_tag="JNZ57_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HAY8827930.1"
                     /translation="MKFIGKLLLYILIALLVVIAGLYFLLQTRWGAEHISAWVSENSD
                     YHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTIL
                     LENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPKAGKVL
                     GTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADG
                     SWQVENLRMADIRLQSEKSLTDFFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLS
                     LHNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINAEFSPQGVALRQFTSRWEGG
                     MVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRN
                     LIIDIDPDFPWQLTTLDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLA
                     LTANSSTVNISELSAFTEKGILEATASVSQTPQRQTHISLNGRGVPVNILQQWGWPEL
                     PLTGDGNIQLTASGDIQANAPLKPTVSGQLHAVNAAKQQVTQTMNAGIVSSGEVTSAE
                     LVQ"
     gene            complement(6251..7642)
                     /gene="xanP"
                     /locus_tag="JNZ57_001681"
     CDS             complement(6251..7642)
                     /gene="xanP"
                     /locus_tag="JNZ57_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine/proton symporter XanP"
                     /protein_id="HAY8827931.1"
                     /translation="MSVSTLESENAQPVAQTQNSELIYRLEDRPPLPQTLFAACQHLL
                     AMFVAVITPALLICQALGLPAQDTQHIISMSLFASGVASIIQIKAWGPVGSGLLSIQG
                     TSFNFVAPLIMGGTALKTGGADVPTMMAALFGTLMLASCTEMVISRVLHLARRIITPL
                     VSGVVVMIIGLSLIQVGLTSIGGGYAAMSDNTFGAPKNLLLAGVVLALIILLNRQRNP
                     YLRVASLVIAMAAGYALAWFMGMLPESNEPMTQELIMVPTPLYYGLGIEWSLLLPLML
                     VFMITSLETIGDITSTSDVSEQPVSGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCF
                     GQNNGVIQLTGVASRYVGFVVALMLIVLGLFPAVSGFVQHIPEPVLGGATLVMFGTIA
                     ASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPLILQFAPEWLKNLLSSGIAAGGIT
                     AIVLNLIFPPEKQ"
     gene            7922..9127
                     /gene="gltS"
                     /locus_tag="JNZ57_001682"
     CDS             7922..9127
                     /gene="gltS"
                     /locus_tag="JNZ57_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HAY8827932.1"
                     /translation="MFHLDTLATLVAATLTLLLGRKLVHSVSFLKKYTIPEPVAGGLL
                     VALALLVLKKSMGWEVNFDMSLRDPLMLAFFATIGLNANIASLRAGGRVVGIFLIVVV
                     GLLVMQNAIGIGMASLLGLDPLMGLLAGSITLSGGHGTGAAWSKLFIERYGFTNATEV
                     AMACATFGLVLGGLIGGPVARYLVKHSTTPNGIPDDQEVPTAFEKPDVGRMITSLVLI
                     ETIALIAICLTVGKIVAQLLAGTAFELPTFVCVLFVGVILSNGLSIMGFYRVFERAVS
                     VLGNVSLSLFLAMALMGLKLWELASLALPMLAILVVQTIFMALYAIFVTWRMMGKNYD
                     AAVLAAGHCGFGLGATPTAIANMQAITERFGPSHMAFLVVPMVGAFFIDIVNALVIKL
                     YLMLPIFAG"
     gene            complement(9161..11242)
                     /gene="recG"
                     /locus_tag="JNZ57_001683"
     CDS             complement(9161..11242)
                     /gene="recG"
                     /locus_tag="JNZ57_001683"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HAY8827933.1"
                     /translation="MTGRLLDAVPLSSLTGVGAALSNKLAKINLHTVQDLLLHLPLRY
                     EDRTHLYPIGELLPGVYATVEGEVLNCNISFGGRRMMTCQISDGSGILTMRFFNFSAA
                     MKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRVQGDLSTPELQETLTPVYPTTEGVKQ
                     ATLRKLTDQALDLLDTCAIEELLPPELSQGMMTLPEALRTLHRPPPTLQLSDLETGQH
                     PAQRRLILEELLAHNLSMLALRAGAQRFHAQPLSANDALKNKLLAALPFKPTGAQARV
                     VAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHA
                     NNFRNWFEPLGIEVGWLAGKQKGKARLSQQEAIASGQVQMIVGTHAIFQEQVQFNGLA
                     LVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSMIDE
                     LPPGRTPVTTVAIPDTRRTDIIDRVRHACITEGRQAYWVCTLIEESELLEAQAAEATW
                     EELKLALPELNVGLVHGRMKPAEKQAVMASFKQGELHLLVATTVIEVGVDVPNASLMI
                     IENPERLGLAQLHQLRGRVGRGAVASHCVLLYKTPLSKTAQIRLQVLRDSNDGFVIAQ
                     KDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPEVQRLARHIHERYPQQAKALIER
                     WMPETERYSNA"
     gene            complement(11248..11937)
                     /gene="trmH"
                     /locus_tag="JNZ57_001684"
     CDS             complement(11248..11937)
                     /gene="trmH"
                     /locus_tag="JNZ57_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(18)-2'-O)-methyltransferase
                     TrmH"
                     /protein_id="HAY8827934.1"
                     /translation="MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVG
                     VHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNA
                     VDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYE
                     AQRQRQNAGMYLRENSMLPEAEQQHLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEAD
                     ADWWATMQAAG"
     gene            complement(11944..14052)
                     /gene="spoT"
                     /locus_tag="JNZ57_001685"
     CDS             complement(11944..14052)
                     /gene="spoT"
                     /locus_tag="JNZ57_001685"
                     /EC_number="3.1.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional GTP
                     diphosphokinase/guanosine-3',5'-bis pyrophosphate
                     3'-pyrophosphohydrolase"
                     /protein_id="HAY8827935.1"
                     /translation="MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEP
                     YITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSK
                     LDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIAR
                     ETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILS
                     EIEGRLQEAGIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVNDSDTCYRV
                     LGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMG
                     VAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFT
                     PEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLTSGQTVEIITAPG
                     ARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKLNEIPQENI
                     QRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQHGDASIPPATQSHGHLPIKGADGV
                     LITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQKEPEKFMAVEWDKETAQE
                     FITEIKVEMFNHQGALANLTAAINTTTSNIQSLNTEEKDGRVYSAFIRLTARDRVHLA
                     NIMRKIRVMPDVIKVTRNRN"
     gene            complement(14071..14346)
                     /gene="rpoZ"
                     /locus_tag="JNZ57_001686"
     CDS             complement(14071..14346)
                     /gene="rpoZ"
                     /locus_tag="JNZ57_001686"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013511051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HAY8827936.1"
                     /translation="MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEEND
                     KTTVIALREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR"
     gene            complement(14401..15024)
                     /gene="gmk"
                     /locus_tag="JNZ57_001687"
     CDS             complement(14401..15024)
                     /gene="gmk"
                     /locus_tag="JNZ57_001687"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HAY8827937.1"
                     /translation="MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQP
                     RPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLD
                     IDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHY
                     AEYDYLIVNDDFDTALTDLKTIIRAERLRMSRQKQRHDALISKLLAD"
     gene            15282..16964
                     /gene="ligB"
                     /locus_tag="JNZ57_001688"
                     /pseudo
     CDS             15282..16964
                     /gene="ligB"
                     /locus_tag="JNZ57_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418104.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigB"
     gene            complement(16961..17578)
                     /locus_tag="JNZ57_001689"
     CDS             complement(16961..17578)
                     /locus_tag="JNZ57_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312548.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HAY8827938.1"
                     /translation="MLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGG
                     SVRDILLGHYPLGWVKHPEYVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSI
                     IGAQVALDMGHGPIIAVVAAVTTGVFGGVLRDMFCKRIPLVFQKELYAGVSFASAVLY
                     IALQHYVSNHDVVIISTLVFGFFARLLALRLKLGLPVFYYSHEGH"
     gene            complement(17870..18694)
                     /gene="dinD"
                     /locus_tag="JNZ57_001690"
     CDS             complement(17870..18694)
                     /gene="dinD"
                     /locus_tag="JNZ57_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312547.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein D"
                     /protein_id="HAY8827939.1"
                     /translation="MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLA
                     RATQACEASNQAASDHFVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVI
                     AAGQTYFAIQTRRQELADDEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAI
                     DFAIFQNHGYRGLYGGLDQKAIHQRKGLKKNQNILDHMGSTELAANLFRATQTEEKLK
                     RDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK"
     gene            19128..19487
                     /locus_tag="JNZ57_001691"
     CDS             19128..19487
                     /locus_tag="JNZ57_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004202368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827940.1"
                     /translation="MRMTSRKKEILSYFEPDNLEWVTGEIGAPPFDVSGVAYLLHGMV
                     SFDKRHQLESTRRTLESMVAGGLLERVTVYESRQIRRGGETNATVVRYGLPGQCAVMR
                     DTGGADNAISGEYMRVS"
     gene            complement(19480..20022)
                     /locus_tag="JNZ57_001692"
     CDS             complement(19480..20022)
                     /locus_tag="JNZ57_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid pRiA4b ORF-3 family protein"
                     /protein_id="HAY8827941.1"
                     /translation="MYQLKITIRDSKPPIWRRVLVPEQIPFSELHAVIQLAFGWNDEH
                     LYMFEKGRKGDPGSEYRVWGEDESMGNAAITPLWAALQNDGDKLVYTYDFGDWWDCVI
                     VLEKQTHDTSNQPISCLRGKGTTPVENSGGLHGYNELLLQARESDNPEQAEIHNFLML
                     DIERRVYDLSSINDRLQALN"
     gene            complement(20143..20328)
                     /locus_tag="JNZ57_001693"
     CDS             complement(20143..20328)
                     /locus_tag="JNZ57_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002436675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827942.1"
                     /translation="MTPREIALLTIAKLEHGGHQLTQADQREIERSVNADIARRDRFR
                     EMMRAPAYQWKKPAPRR"
     gene            complement(20560..21171)
                     /locus_tag="JNZ57_001694"
     CDS             complement(20560..21171)
                     /locus_tag="JNZ57_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001205651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827943.1"
                     /translation="MRDRTRSYTTDLPRIGLPFLANMRSRLADAEPGTQLYTQTESGT
                     LYAFRQADSYAMTINGVTRAIRTTTTKAGYGVREWYACPHCMKRAAKLYIGKKDIGCR
                     ACWKLHYKSQSADILDRMRMKIRQQRCAIWGSNDLANNLFNDIRMFPKPKGMRWATFD
                     RKRAELSVMEMAYWQAFSPVVDRITGVIERKAGKAARGIGLTL"
     gene            complement(21865..22215)
                     /locus_tag="JNZ57_001695"
     CDS             complement(21865..22215)
                     /locus_tag="JNZ57_001695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827944.1"
                     /translation="MKPYILAAGLISSAPALSAIHCGGFTIQPDRYRTTINGDVVHIV
                     DAQFYGAPRDFSQAAIKLLPDAITTTDRQYRLETQGGNALLELMTRENPPRVLNRERC
                     DAGLTSFGWYTSAP"
BASE COUNT         5124 a         5657 c         5962 g         5609 t
ORIGIN      
        1 gtcgtataaa aaagggtgtt atggagcgtg taaaacaaca tcttcacctt aatggcgata
       61 cagttggctg agagccagca gggggcaaat cacctgcaaa taaacacggc acatgctggc
      121 gcgcatatcg cggatgcgtt cgaggacaga agaaccgaca ggcggattct tcagccgctc
      181 atcgtccatc acaaaacctt agaccaggta ttcctgaagc cgattgaata ttgagcagta
      241 gaaaatatct ggattgacag tattacaagg ggttggagaa cgtcagaaga ggcattttgg
      301 cggaagatca caggagtcga acctgtccgg gaccgctggc ggccccaact ggatttgaag
      361 tccagccgcc tcaccggaga cgacgatctt ccgcgcctcg attgctacat ggaggcgggg
      421 cgcattatag ctacttcctt gagtttctac atcccccaga tcagtttttt ccgcctaata
      481 cacgcagcgt attatcacga aagcattata gttcatataa aacccatatt ttacaatgat
      541 atatgagcgg aattaacgct accacgatca cataaaacaa gaatcataaa ttaataacca
      601 gatatcggaa tattcgctct cacagggatg gtttacaaaa tgcgttatcg gtctcagcac
      661 ccctatagca tcaaggaaaa gcagatgaag agtgaagtgt tgtccgttaa agagaaaatt
      721 ggttatggca tgggagacgc cgccagccac attattttcg ataacgtaat gttatatatg
      781 atgttctttt ataccgatat ttttggcatt cctgccggtt ttgtcggaac catgtttttg
      841 gtcgctcgtg cactggatgc gatttccgat ccttgcatgg ggttgttggc cgatcgaacg
      901 cgctctcgct ggggtaaatt tcgtccgtgg gtactgtttg gcgcactgcc attcgggatc
      961 gtctgtgtac tggcctatag cacgccagat ctcagtatga acggcaaaat gatctatgca
     1021 gcaattactt acaccctact taccttactt tataccgtcg tcaatatccc ttactgcgca
     1081 ttgggtggtg taatcaccaa tgacccgact cagcgtatct cgctgcaatc ctggcgtttt
     1141 gtgctggcga ccgcgggagg catgctttct actgttctga tgatgccact ggttaattta
     1201 attggcggtg ataataaacc actcggtttc cagggcggta tcgcggtcct ttccgtggtg
     1261 gcattcatga tgctggcatt ttgtttcttc accactaaag aacgcgttga agcaccacct
     1321 acaacaacgt ctatgcggga agatttacgt gatatctggc aaaacgacca gtggcggatt
     1381 gtcggtttac taaccatttt caatatcctg gcggtgtgcg tactcggtgg ggcgatgatg
     1441 tattacgtca catggatttt gggcacgccg gaagtgtttg tcgcttttct caccacttat
     1501 tgcgtgggta acctgattgg ttccgcactg gcaaaacctc tgaccgactg gaaatgtaaa
     1561 gtcactatct tctggtggac gaacgccctg ctggcagtga ttagcctcgc gatgttcttt
     1621 gttcccatgc aggccagcat cactatgttt gtcttcatct tcgtgattgg tgtgttgcat
     1681 caactggtga cacctatcca gtgggtaatg atgtccgata ccgtcgacta cggcgagtgg
     1741 tgcaatggta aacgcctgac cgggatcagt tttgctggca cgctgtttgt gctcaaactg
     1801 gggttggcct tcggcggcgc tcttatcggc tggatgctgg cttatggcgg atatgatgcg
     1861 gcagaaaaag cgcagaacag cgccacgatt agcatcatta ttgcgctatt cacgattgtt
     1921 ccggcgatct gttatttgct gagcgcgatt atcgctaaac gctactactc actcacgacg
     1981 cacaatctga aaaccgttat ggaacagctg gctcagggta aacgccgttg ccagcaacaa
     2041 ttcacctctc aagaagtgca gaactaagga acggcaatga aaattagcga tggaaactgg
     2101 ttgattcaac ctggcctcaa tttgattcac ccgcttcagg tgttcgaggt tgaacagcag
     2161 gataatgaaa tggtggtcta tgctgccccc cgtgatgtgc gtgaacgtac ctggcagctt
     2221 gatacgcctt tatttacgct gcgctttttc tccccacagg aaggtattgt cggtgtgcgg
     2281 attgagcatt ttcagggagc gctgaataac ggtcctcatt atccgctcaa tattttgcag
     2341 gacgtgaagg tcacaatcga aaacacagaa cgttatgctg agtttaaaag tggcaactta
     2401 agcgcgcgtg tcagcaaagg tgagttctgg tcactcgatt ttctgcgcaa cggtgaacgt
     2461 attaccggtc aggacacgaa taatcaacga aattatatgt ttgagcggct tgatcttggc
     2521 gttggcgaaa cagtttatgg tctgggagag cgttttactg ccctggtgcg caatggtcag
     2581 acggtagaga cctggaaccg ggacggcggc acaagtactg aacaggcgta taaaaatatc
     2641 ccgttctata tgactaaccg tggctatggg gtgctggtca atcaccccca gagtgtctct
     2701 tttgaagtgg gatcggagaa agtctccaaa gtgcagttca gcgttgagag cgaatatctc
     2761 gaatactttg ttatcgacgg tccgacgccg aaagcggtac ttgatcgtta tacccgtttt
     2821 actggtcgtc cggcgctgcc gcccgcatgg tccttcggcc tgtggctaac cacttcattt
     2881 accaccaact acgacgaagc gacggtaaac agctttatcg atggtatggc ggaacgcaat
     2941 ctgccgctgc atgttttcca ctttgactgt ttctggatga aagccttcca gtggtgcgat
     3001 tttgagtggg acccgctgac tttcccggac ccggaaggga tgatccgccg cctgaaagcg
     3061 aaagggctga aaatctgcgt ctggattaac ccctatatcg gtcaaaaatc ccccgtcttt
     3121 aaagagttac aagagaaagg ctatttactc aaacgcccgg acggttcgct atggcagtgg
     3181 gataaatggc agccaggtct ggcgatttat gactttacca atccggatgc ctgcaaatgg
     3241 tacgccgaca aactgaaagg tctggtcgcg atgggcgttg attgctttaa gaccgacttt
     3301 ggcgaacgta tcccaactga tgttcagtgg tttgacggtt ccgatccgca gaaaatgcat
     3361 aaccattatg cgcacatcta caacgaactg gtgtggaacg tgctcaagga caccgttggt
     3421 gaggaagaag ctgtcttgtt tgcccgctcg gcctccgtcg gtgcgcagaa attcccggta
     3481 cactggggtg gcgattgtta cgctaactac gaatcaatgg cggaaagcct gcgcggtggt
     3541 ttgtctattg gcctttcagg ttttggcttc tggagccact atatcggcgg ctttgaaaat
     3601 accgctccgg cgcacgttta caaatgctgg tgcgcgtttg gtttgctctc cagccatagc
     3661 cgtttacacg gtagcaaatc ttatcgtgtg ccgtgggcct acgatgatga gtcctgtgat
     3721 gtggtgcgct tcttcacgca actgaaatgc cgcatgatgc cgtatctgta tcgtgaagct
     3781 gcgcgtgcaa acgcgcgggg tacgccgatg atgcgggcca tgatgatgga gttcccggac
     3841 gatccggctt atgattacct tgaccgtcaa tacatgttag gcgacaacgt gatggttgcg
     3901 ccggtgttca ctgaagcggg cgatgtgcag ttctacctgc cggaaggtcg ctggacacac
     3961 ctgtggcaca acgatgagct cgacggttgt tgctggcata aacagcagca cagcttcctg
     4021 agtctgccca tttatgtgcg tgataacacc ctactggcgc tgggcaacaa cgatcaacgt
     4081 cccgattacg cgtggcacga aggcacggca ttccacctct ttaatctgca agacgggcat
     4141 gaagccgtct gtgaagtgcc cgctgctgac ggatcggtga tctttacttt aaaagcagca
     4201 cgtactggca acacgattac tgtgactggt gcgggcgagg cgaagaactg gacactgtgc
     4261 ctgcgcaatg ttgtgaaagt aaatggtctg caagacggtt cgcaggctga aagtgagcag
     4321 gggctggtgg tgaagcctca agggaatgcg ctgacaatta cgttgtaatc tattgatgga
     4381 atgccgggta cgtctgagtc gtacccggcg agattgatgt ttactgcacc agctctgccg
     4441 acgtaacttc accgctggaa acgatgccag cattcatggt ttgagtcact tgctgctttg
     4501 cggcgttcac ggcatgcaat tgcccgctaa ccgtaggttt cagcggggca ttggcctgaa
     4561 tatctccact ggcggtaagc tgaatattgc cgtcgccagt caacggtaat tcaggccatc
     4621 cccattgttg caaaatattc accggcacac cgcgtccatt caggctgata tgggtctgac
     4681 gttgtggcgt ttgtgaaaca ctggcagtgg cttccagaat gcctttttca gtaaatgcac
     4741 tcagttcgct gatattcacc gtgctgctgt tggcggtcag cgccagcgac gggcgacgaa
     4801 catcaacacg attgaatgtc gcggcggcgg cattcagatt cgccgagcca ctccagacgc
     4861 cccatttatg atcggtaacc agcgtcaggt tggcaccgta accatcgagc gtggtgagct
     4921 gccacgggaa gtcagggtcg atatcaatga tcagattgcg gctggcgcta aatctcttca
     4981 gttgcaggct gtttaaccaa ccgggtgtcg tttccatcca caactgttgc cagtttttcg
     5041 gcaaggtata ttccagcccg gcaattgccg catcatcaag gatcaacgtt ttcccgtcac
     5101 gcagccagtt ccctgacgtt ctgaccatac ccccttccca gcggctggtg aactggcgca
     5161 gcgctacgcc ctgcggggaa aattccgcgt ttataatcgg gtcaaataaa tgcagcgaac
     5221 cataaatgaa ctcgctagcg ttcatcgaca gtttgccttc ttgtgtctgc cagtcatctt
     5281 tactgaaggt catgttgtgc aagctgagat cgaggtcggt caccgcccag tccggacctt
     5341 gcaaacgagc atcgatcact tccaggcgac caatctgcaa cgacgggaca gagcgtaatg
     5401 gcgcaaagaa gtcggttagc gatttttcgc tttgtagacg tatatccgcc atgcgcaggt
     5461 tttccacttg ccagctgccg tcggcgttac gctgcgcgtt tccggttaat gtcccgcggg
     5521 cgatgtcggc acccaggtta gtcagcgtaa cgcgatcgtt atcaatactg ccttcaatca
     5581 gtacattggt ggcaggaaca tcattgagcg aaagcgatcc ggcactaaac tgaatctgcg
     5641 ccttcgtacc cagcacttta ccggcttttg gtgaccacgg aactacgccg ccatttaccc
     5701 gctgcgcgct cagtttccat tcgctattcg ggctattaaa cgccatatca cgcagttgca
     5761 gacgatcagc tttgaacggt agcggcgcgg tctggtcggt gagattcagc gtcccgtttt
     5821 ccagcaggat ggtatcgaca tggcgtggtt cggtcagttg ccgactgctt agcgcaatgt
     5881 cgacactttt ggccaccagg gtcgcgggct gaccatcacg accaaacgtg acattctcca
     5941 gcacgatatg agatggcgcg gaaaaacggt gatccatcgc cccgaaggcc agatgatagt
     6001 cgctattctc ggaaacccat gcgctgatat gttctgctcc ccagcgggtt tgcagaagaa
     6061 aatagaggcc agcgatcacc actaacagag cgatgagaat gtagagaagc agcttcccaa
     6121 taaatttcat ggtcttccat cccgtgaaat gcacataaga gagttatgca cgatttacgc
     6181 gcaatcctca aggcgggaat ggtgaaagag gtgagactgc ggcggtaatt atcttaccgc
     6241 cgccagtgaa ttactgtttt tctggtggga aaatcagatt cagcacgatg gcagtaatac
     6301 cgcccgcggc gatcccggag gagagcaggt ttttcagcca ttcaggggca aactgcaaaa
     6361 tcagcggctg ctgagacacg cccagaccaa ccgccagcga cagcgcgata atcagaatcg
     6421 cccgacggtt cagcggctca cgagaaacga tacgcacacc ggaggcggcg atggtgccaa
     6481 acattacaag cgttgcgccg cccagaaccg gttctggaat gtgttgtaca aaaccgctca
     6541 ctgccgggaa cagacccagc acgatcaaca tcagcgcgac gacaaaaccg acatagcggc
     6601 tggcaacacc agtcaactgg atcactccgt tgttttgccc gaagcaggag ttcgggaagg
     6661 tgttaaacac cgccgaaaca aacgagttca ggccgtttgc cagcacgccg cctttcaggc
     6721 gtttcatgta cagcggaccg gacactggct gttcggaaac gtcagaggtc gacgtgatat
     6781 cgccaatggt ttccagcgaa gtgatcataa agaccagcat cagcggcagc agcagactcc
     6841 attcaatgcc aagaccgtaa tagagcggcg ttggcaccat aatcagttct tgcgtcatcg
     6901 gttcgttgct ttctggcaac atgcccataa accacgccag cgcatatccg gccgccatcg
     6961 caatcaccag tgaggccacg cgtaagtaag ggttacgttg acggttaagc aggataatta
     7021 aggctaagac cacgcctgcc agcagcagat ttttcggtgc gccgaaggtg ttatcgctca
     7081 tggctgcgta accgccgcca atggacgtta acccaacctg aattagcgac aggccgataa
     7141 tcatcaccac aacgccagaa accagcggcg taataatgcg gcgcgccaga tgcagaacgc
     7201 gggagatcac catctcggtg caacttgcca gcatcaacgt gccgaacaaa gccgccatca
     7261 tggtaggaac atcagcacca ccggttttca gcgcggtacc gcccataatc agcggggcaa
     7321 caaagttgaa gctggtgccc tgaatagaca acagcccgga gccaaccgga ccccaggcct
     7381 taatttgaat aatcgatgcc acaccggagg caaacagcga catactaata atgtgttgcg
     7441 tgtcttgtgc cggtaaaccc agcgcctggc agattaatag cgctggcgtg atcaccgcaa
     7501 cgaacatcgc cagcagatgc tgacaggcgg caaacagggt ttgaggaagc ggcggacgat
     7561 cttcaagacg gtaaatcagt tcgctgtttt gagtctgcgc aaccggttgc gcattttctg
     7621 actcgagggt ggaaacagac atcgaaaaca atcccgtggt agcaaagcgg gcattttagc
     7681 tgaccgaaag agaaaagcaa acgtttgcca catcatcatc taaatattta aatgagataa
     7741 atgcactttt ttatataact tttggtattt ttctgcttaa aatccatgcc atttgttcat
     7801 taacagctga gaatttgacc caggaaagca taactcgata cccgtcatag ttcatgaagt
     7861 tgccactgcg cgatgaagta tgacgagtat gaaagagtga tgcggataca aaggagtaac
     7921 tatgtttcat ctcgatactt tagcaacgct tgttgccgca acgctgacgt tgctgctcgg
     7981 gcgtaagttg gtccattccg tctccttttt gaagaaatac accataccgg aacctgttgc
     8041 gggtggtttg ttggtggcgc tggcgctact agtactgaaa aaaagcatgg gctgggaagt
     8101 caactttgat atgtccctgc gcgatccgtt aatgctggct ttcttcgcca ccattggcct
     8161 gaacgccaac attgccagtt tgcgtgccgg tgggcgtgtg gttggcatct tcttgattgt
     8221 ggttgttggt ctgttggtga tgcaaaatgc cattggcatt ggtatggcta gcctgttagg
     8281 gcttgatccg ctgatggggc tgttggccgg ttctattacg ctttccggcg gtcacggtac
     8341 gggcgctgca tggagtaaat tgttcattga acgttatggc ttcaccaatg cgacggaagt
     8401 ggcgatggcc tgtgcaacgt tcggtctggt gctgggcggc ttgattggcg gtccggtggc
     8461 gcgctatctg gtgaaacact ccaccacgcc gaacggtatt ccggatgacc aggaagtccc
     8521 gacggcgttt gaaaagccgg atgtgggacg catgatcacc tcgttggtgc tgattgaaac
     8581 tatcgcgctg attgctatct gcctgacggt ggggaaaatt gttgcgcaac ttttggctgg
     8641 cactgctttt gaactgccga ccttcgtctg tgtactgttt gttggcgtga ttctgagcaa
     8701 cggtctgtca ataatgggct tttaccgcgt ctttgagcgt gcggtatccg tgctgggtaa
     8761 cgtaagcttg tcgttgttcc tggcgatggc gttgatgggg ctgaaactgt gggagctggc
     8821 ttcgctggcg ctgccgatgc tggcgattct ggtggtacag accatcttca tggcgttgta
     8881 tgccatcttc gttacctggc gcatgatggg caaaaactac gatgcggcag tgctggctgc
     8941 gggtcactgt ggttttggcc tcggtgcaac gccaacggca atcgccaaca tgcaggcgat
     9001 cactgaacgc tttggcccgt cgcacatggc gtttttggtg gtgccgatgg tcggtgcgtt
     9061 ctttatcgat atcgtcaatg cgctggtaat taagttgtat ttgatgttgc cgatttttgc
     9121 cggttaaccg atgaagcggc ggtcttctca ccgccgcctt ttacgcattc gagtaacgtt
     9181 ctgtctccgg catccagcgt tctatcaagg cttttgcctg ttgtgggtaa cgttcgtgaa
     9241 tatgtcgcgc caggcgctga acttccggga tcatcgcctg atcgcgcagt aaatccgcca
     9301 ctttaaattc agcattaccc gtctgacgcg tgcctaacaa ttcgccaggg ccgcgaatct
     9361 ccagatcttt ttgcgcaatc acaaaaccgt cgttactgtc gcgcagcact tgcaggcgaa
     9421 tttgcgccgt tttagaaagc ggcgttttgt agagcagcac gcagtgagaa gccaccgcgc
     9481 cacgacctac gcgcccgcgc agctggtgta actgcgccag acccagacgc tcagggtttt
     9541 cgataatcat caggctggcg ttaggcacat caacaccgac ttcaataacg gtagtggcaa
     9601 ccagcagatg tagctcacct tgtttaaacg acgccatcac cgcctgtttc tcggctggtt
     9661 tcatccgccc gtgtaccagg ccaacattca attctggtag cgccagtttc aactcttccc
     9721 aggtagcttc cgccgcctgc gcttccagta actctgactc ttcaatcaac gtacaaaccc
     9781 agtacgcctg acgaccttca gttatgcagg catggcgcac gcggtcaatg atgtcggtac
     9841 ggcgggtatc aggaatagcg accgtagtca ctggcgtgcg gcctggcggc agctcatcta
     9901 tcatcgaggt atcgagatcg gcatacgccg tcattgccag cgtgcggggg atcggcgtgg
     9961 cggtcatgat caactgatgc ggatggaagc cttgctgctg gcctttctcc cataacgcca
    10021 gacgctgatg cacgccaaag cgatgttgtt cgtcgataat caccagcgcc agaccgttaa
    10081 actgcacctg ttcctggaag atggcgtgcg taccaacaat catctgcacc tgaccgctgg
    10141 cgatggcttc ctgctgagac agtcgcgctt tgcctttctg cttaccggcg agccagccca
    10201 cttcgatacc gagcggttca aaccagttgc ggaagttatt ggcgtgctgt tcggcgagta
    10261 attcggttgg tgccatcaat gccacctgtt tgccgtgggc aatcgcacgc agcgcggcga
    10321 gggcggcgac cagcgtttta ccggaaccta catcgccctg taccaggcgc atcatcggca
    10381 catccagcgc catatcgcgc tcgatctccg ccactacgcg tgcctgtgcg cccgttggct
    10441 tgaacggtaa ggctgcgagg agtttatttt tcagcgcatc attggcgctc agcggctggg
    10501 catgaaaacg ctgtgctccg gcacgtaagg ctaacatgct gaggttgtgc gccagcagtt
    10561 cttccagaat cagacgacgt tgcgccggat gctgcccggt ttccagatcg ctaagctgta
    10621 gcgtcggtgg cgggcggtgc aaagtgcgca acgcttccgg tagcgtcatc attccttgtg
    10681 acagttccgg cggcaggagt tcttcaatgg cgcaggtgtc gagcagatcc agcgcctggt
    10741 cggttaattt acgcagcgtg gcctgcttta cgccttccgt tgttggataa accggcgtga
    10801 gcgtttcctg taattctggc gtgctgagat cgccctgcac gcggtattcc gggtggatca
    10861 tctccgcacc atatttaccg cgctttgctt cgccataagc cagtacacgg cggcccgtcg
    10921 ccaggctatt tttcattgcc gcgctgaaat tgaaaaagcg catggtgagg atgccggaac
    10981 cgtcgctgat ctggcaggtc atcatccgcc gaccgccgaa ggagatattg cagttcagca
    11041 cttcgccttc caccgtggca taaacgcccg gcagtagttc tccgatgggg tagagatggg
    11101 tgcgatcttc gtagcgcagg ggaaggtgta agagtagatc ctgcacggta tgcaggttga
    11161 ttttcgccag tttgttacta agtgctgcgc caacgcccgt tagggaactg agtgggacag
    11221 catctaacag gcgacctgtc atggcactta ccctgcagcc tgcatagtag cccaccagtc
    11281 ggcatcagct tcgatctcgc cttgctgatt gacgtgggga taaggcaggc ctttgcgttt
    11341 tgcgactttc gccagcaccg gatagccgcc ttcaaacaac aggtgttgtt gctctgcttc
    11401 cggcaacatg ctgttttcac gcaggtacat gcctgcattt tgccgctgac gctgggcttc
    11461 gtaaagaatg agggctgagg caacggaaac attcagcgac tgcaccatgc cgatcatcgg
    11521 aatgatgatg tcctgatccg ccagggccaa tgcttcctgc gtgatgcccg ttttctcctg
    11581 tcccatcaaa atgcaggtcg ggcgagtgta atcaatttcg cggaaatcga cagcgttatc
    11641 agaaagatgg gttgccagaa tctgcatgcc ctggcctttg agatgagcga cggcatcgcc
    11701 aatggtgcgg tgtgttttca cctgtaccca gctgttacta cccgccgctg ccgaagccat
    11761 ggtgcgcatg cggctaccag gccagacggc gtgaacttca tgtacgccaa cggcatctgc
    11821 ggtacgaata atcgcagaaa cgttatgagg tttgtggacc tgctccatgc agacggtcag
    11881 atcaggctgc cgcctggcga gcatttcgca gatgcgtgca taacgtgttg ggttcataaa
    11941 acattaattt cggtttcggg tgactttaat cacgtctggc atcacgcgga ttttgcgcat
    12001 gatattcgcc agatgcacac ggtcacgagc ggtcagacga ataaaggcgc tgtagacgcg
    12061 accatctttc tcttccgtat tcaaactttg aatattcgaa gtcgtggtgt taattgccgc
    12121 cgtcaggttt gccagcgcac cctgatgatt gaacatctcc accttgattt cggtgatgaa
    12181 ctcctgcgcc gtctctttat cccattccac agccataaac ttctctggct ctttctggta
    12241 gccacggatg ttacggcagg attcatggtg gatcaccaga cctttaccgg ggctgacgtg
    12301 ggcgataatc gggtcgccag gaatagggcg gcagcatttc gcaaaggtga tcagcacgcc
    12361 atcagcgcct ttgatcggca gatgcccgtg gctttgagtc gccggtggaa tggaggcgtc
    12421 cccatgttgt agatttttcg cgaccaccac gctcattgcg ttaccaaggc cgatttctgc
    12481 cagcagatcg tcaagcgttg ccagcttcat gcgatccagc tcgcgctgaa tattttcctg
    12541 cgggatttca ttgagcttac ggctaccacc caaagcatgg ttgagcagac gacggcccag
    12601 gcttacagaa tcatcacgct tgaggttttt cagcaactga cgaattttgg cgcgcgcttt
    12661 cgagctaacg acaaagttca gccaagcggc attcgggcga gcgcccggag cggtaatgat
    12721 ttcaacggtc tgaccgctag taagcggctg cgacagcggg taaggctggc ggtcgacgcg
    12781 tgcgcccacg caggcatggc cgatatcggt atgcactgca taagcgaagt cgacgggcgt
    12841 tgcaccggca ggcagctcga caatgcgccc ttccggtgtg aaaacgtaaa tctcatccgg
    12901 gaagagatcg gatttaacgc tctcgataaa ttcaaacgaa ctaccggcgc tctgttgcag
    12961 ctccagcagg ctttgcatcc agcgctgggc gcgtatttgt gcggtagtac tggtttcgcc
    13021 gtgctcttta taagcccagt gcgcggcaac acccatctcc gccatctgat ccatatcttc
    13081 ggtacggatc tggacctcaa ccggcacgcc gtgcgggcca atcatcgagg tgtgcaacga
    13141 ctgatagccg ttcgcttttg gaatggcgat atagtctttc acgcggcccg gacgcggctt
    13201 gtacaggctg tgcatctggc ccagcacgcg ataacaggtg tcagaatcat tgacgatcac
    13261 gcggaaagcg tagatgtcca tgattgagtg aaaacgctgc tctttgagca ccattttgca
    13321 gtaaatcgaa taaagatgct tttcgcgacc actgacgcgg cacggtattc ccgcttcctg
    13381 caaacgccct tcgatttcag aaagaatctt ctggatcatc tctttacggt tgccgcgcgc
    13441 ggctttcacc acttctttga ttacgcgata acggttggga tacagcgcct caaaacccag
    13501 ctcttcgagt tcggttttaa tgtggtggat acctaaacgg tgcgccagcg ggctgtaaat
    13561 ttcgagagtt tcacgggcga tgcggcgacg tttgtccggg cgaagtgagc ccagcgtgcg
    13621 catgttgtgg gtacggtcgg caagtttgat gaggatgacg cggatatcct gcaccatcgc
    13681 cataatcatc ttgcgaaagt tttcggcctg cgcctctttc ttatcgcgga acttgagttt
    13741 atcaagtttc gacaccccct ctaccagctc ggcgacgctt ttaccaaaaa gctgttccat
    13801 atcctggtag gtggcgggag tatcttcaat cacgtcatgc agcagcgccg ccatcagcgt
    13861 ttcatagtcg agtttcatct cggccagaat gcaggcaacc gctaccgggt gcgtgatata
    13921 gggttcaccg cttgaacgtg tttgcccctc gtgagcatca cgtgcaacga gatacgcctg
    13981 ccgcagacgc ttgatttggt cttccggcag gtaggtttga atcagttgat tcaggctttc
    14041 aaacagatac aagggcgacc cgctttgtga ttaacgacga ccttcagcaa tagcggtaac
    14101 ggcttgtaat tcagcggctt cctgctcttg ctgttcctgg cgttcgcgaa cgtcgaggat
    14161 ctggttgttg atcagacctt cttcgatttc gcgcagcgcg attacagtgg ttttatcgtt
    14221 ttcttccggt accagcggat cctttccgcc tacctgcatc tgacgagcgc gacgcgcggc
    14281 gaccagtacc aggtcaaaac ggttaccaat tttctctaca gcgtcctgaa cagttacgcg
    14341 tgccatactt aaaaagctcc acaggtgaag aaatgactgg gcatgatact gaaatcaggt
    14401 tcagtctgcc aacaatttgc tgattaaagc gtcatgacgc tgcttttggc ggctcatgcg
    14461 cagacgttcg gcgcgaataa tggtcttcaa atcggtcaac gcggtatcga agtcatcatt
    14521 cacaatcagg taatcatatt cggcgtaatg gctcatttct gcaacagctt gcgccatacg
    14581 ctttgcaatg acctcttcgc tgtcctgacc gcgaccgcgt agacggcggt ccagttcaat
    14641 tttagacggc ggtaaaataa agatactccg cgcgtgcggc atcttctggc gaatttgctg
    14701 cgcgccctgc cagtcgatat cgagaaaaac atcgacaccg gtcgccagta cttgctcaat
    14761 ggcctcacgc gaagtgccat agtaattacc aaaaacttct gcgtgttcga ggaacgcatc
    14821 tctgctaatc atttctttaa attcatcatg attaacaaag aaataatgtt caccgtggac
    14881 ttcaccagga cgcggttggc gtgtggtgtg tgaaacagaa acctgggtgt catacaacgg
    14941 ttgggttttt aataaagcct gaatcaggct ggatttaccc gcgccactgg gggcagaaac
    15001 aatataaagc gtgccttgag ccatgagtat ctttcgtatg tgattagcga aataaagcct
    15061 acatacgagc ttattataca cggcgcggcc atgtgacgta gcccttgctc acactttttg
    15121 cgcaaagttg ttgcgttttg cgtagctgct tccgcatttg cctgtgattt actgcaataa
    15181 agacgattct caggaagcgt cctcgcagac tccgtttttg ccactcggct ttgccttcac
    15241 cacgttgtat atctgccagc ctgactacag cggaggtgaa gatgaaagta tggatggcga
    15301 tattaataag tatcttgtgc tggcaatcat ctgtgtgggc ggtctgtccg gcctggtcgc
    15361 cagccagagc acaggaagaa attttccgcc agcaacagca aataaaacag tgggacgatg
    15421 actactggaa ggaaggaaaa agtgaggtgg aagacggtgt ttacgatcag ttaagcgccc
    15481 gtcttatgca gtggcaacgc tgctttgtga gcgagccccg cgacgtgatg atgccgcctt
    15541 taaatggtgc ggttatgcat ccggttgccc atacgggtgt acgcaaaatg gcggataaaa
    15601 acgcattaag tctgtggatg cgagaacgta gcgatctttg ggtgcagcca aaagttgatg
    15661 gcgttgcggt aaccctggtt tatcgggacg ggaaactgaa caaagcaatc agtcgcggta
    15721 atggcctgaa aggcgaggac tggacgcaga aagttagctt aatttccgct gtgccgcaaa
    15781 ccgttagcgg gcctttagcc aacagtacgc ttcaggggga aatatttctc cagcgcgagg
    15841 ggcatatcca acaacaaatg gggggaataa atgcccgcgc aaaagttgct ggcttgatga
    15901 tgcgccagga cgatagcgac acgctgaatt ctctgggcgt ttttgtctgg gcatggccgg
    15961 atggaccgca gttaatgtct gatcgtttaa aagagctggc taccgcaggt tttactctaa
    16021 cgcagacgta tacccgtgcg gtgaaaaatg ctgatgaagt tgcgcgcgta cgcaatgagt
    16081 ggtggaaagc ggaattaccc ttcgtcaccg atggcgtagt tgtacgagcg gcgaaagagc
    16141 cagaatcccg ccattggcta ccgggccagg cagagtggct ggtggcttgg aaatatcaac
    16201 ctgtagctca ggttgccgaa gtgaaggcga ttcagtttgc ggtgggtaag agcggtaaaa
    16261 tatcggtggt tgcgtcactc gcatctgtca tgctggatga taaaaaagtc cagcgggtga
    16321 atattggttc cgtcaggcgc tggcaggagt gggatattgc gcctggtgat cagattctcg
    16381 tcagccttgc cggtcagggt attcctcgca ttgatgatgt ggtgtggcgc ggtgcagaac
    16441 gtacaaaacc gacaccgcca gaaaaccgct ttaactcgtt gacctgctac tttgcttctg
    16501 atgtttgtca ggaacagttc atttcacgct tagtctggct ggggtcaaaa caggttcttg
    16561 ggctggatgg cattggtgag gccggttggc gcgcgctgca tcagactcat cgctttgagc
    16621 atatcttttc ttggctttta ttaacgccag agcaattaca gaacacgccg gggatcgcga
    16681 aaagtaaaag tgcgcagtta tggcatcagt ttaatctggc tcgtaagcag ccttttactc
    16741 gctgggtgat ggcaatggga ataccgctaa cccgggcggc gcttaatgcc agtgatgaac
    16801 ggtcctagtc gcaactttta tttagcacgg agcagttctg gcagcagctg ccggggactg
    16861 gatctgggcg cgccagacag gttattgaat ggaaggaaaa tgcgcaaatc aagaagctgg
    16921 gcagttggct ggctgcccag cagatcacag gttttgaacc ttagtgacct tcgtggctgt
    16981 agtaaaagac cggtaatccc agcttaagac gtagcgccag taagcgggca aaaaagccga
    17041 ataccagggt ggagataatc accacatcat ggttagaaac atagtgttgc agcgcgatgt
    17101 acagcacggc ggaggcaaat gagacaccag catacaactc tttctggaat accagtggga
    17161 tgcgtttaca gaacatatcg cgcaaaacgc cgccaaacac gccggtggtt accgccgcga
    17221 caacggcaat aattgggccg tgccccatat ccagtgcaac ctgtgcgccg atgatagaaa
    17281 agaccacaag tccgagcgca tcgagcacca gaaacacttt gcgcaggtaa ggcattacag
    17341 gagcaacgat agtggtgagt actgcggcgg tagcgacgat aatcacatat tccgggtgtt
    17401 tgacccagcc gagcggatag tggcccagca gaatatcgcg cactgaccct ccgccaattg
    17461 cggtggcggt cgcaataata attacgccaa atgtatccat gcgccgtcgt ccggccgcca
    17521 gcgcccccgt catggcttcg gcagtgatgc caaccaaata caaaatgtgt aacagcatgg
    17581 ttctctccct aaaaatctgt ctggcagggt agcgatttgt gcgcattgtc acgattgaga
    17641 ttttttaagg taagaggaaa ttgataactt gtagttatgt gaaatcgcta ttttctgtag
    17701 cgtagatgca ttattctgag ttcttgtctg agaaaatgca taagaaaaaa taggttaaaa
    17761 ttgaggggtg gaaaagaaag gtgcaatgtt tagccattgt gttcactgca cctggacttt
    17821 ggcttacgca tcgggtatct caattaagaa aaagagtttt tagtttctgc tatttcttct
    17881 ctgtaatttt tacactgttt tccaactgct tgatgctgac ctgcggggtc ggcaactcct
    17941 caggcatggt tccgccaagt tcctgaatgg tttgcctcac cttgcgaccc acgtcaaagt
    18001 gtgtggtgtt tgcttgctgt tttgaattca cgccatcccg cttgagtttt tcttctgttt
    18061 gggtagctcg aaagagatta gccgccagtt ctgttgaacc catatgatcc aggatattct
    18121 gattcttttt cagccccttc cgctgatgaa tagctttctg atctaatcca ccatacagcc
    18181 cccggtaacc atgattctga aatatggcga aatcgatagc tgtcgctacc ccagcttgct
    18241 gcgctgcctc aaccaattgt ttgttatgtt ctttcaattc atttctcaga aaaagacgct
    18301 tttcgtcttc acgaagttgc ctgaaagctt catcgtcagc cagctcctgc cgtcgggtct
    18361 ggatagcaaa ataagtttgc cctgccgcaa taaccggttt cgcagggtcg ccgttttgta
    18421 ctaccaggta acaggcatag cgggagagat gaacatcttc aagttctcgt tgagcccctg
    18481 aacctaatac aaccattttg gtggtttcaa cgaaatggtc agatgcagct tgattgctgg
    18541 cttcgcacgc ttgagtcgcg cgggccagta ccttttgaaa attgcgccag tcccgataat
    18601 ccagtaacgg tgccaattct ctagctgacc aaaattcttg cccttcagtg ccataatgcc
    18661 gtatttcttc aaaaggttga tgatgttcgt tcattgccca ctccatgtga tatcgattgc
    18721 aaagaaagta aatctgtaac tgtatttata tacagttgtg agtatctcac gttctcagtg
    18781 tgctgggcaa aaaaacatcg caaaatctgg agcaggcacg caaaacagaa ttgaagttgc
    18841 ggggaagaaa aatgccgctc tgtttgagtg ggcggcattt gtgaaggctg aaaagtaaga
    18901 attggcgtta cgagttgaat ctgtttattg agtagtggct ttaaacgccc gtggttgctg
    18961 tgtttcttgt aatgcatttt ctcagtaggt acacccttgt gtacacggta ttttgaggcg
    19021 ctgtctttgg ctgctcgttt tatgctctca tgcttgctgt tctggcctct tatcttttgc
    19081 gccttattgt atgatagtgc tatcccacaa taaggaacct gccagctatg agaatgacca
    19141 gccgcaaaaa agagatactt agctactttg aaccggataa cctcgaatgg gtgactggtg
    19201 agattggtgc gccgccgttc gatgtgtcgg gtgtggccta cctgcttcat ggcatggtgt
    19261 cgttcgataa gcgtcaccag ctcgaatcaa cccggcgcac actggaaagc atggttgctg
    19321 gtggactgct tgagcgggtg acagtgtatg aatcgcgcca gatacggcgc ggcggtgaga
    19381 ctaacgcaac ggtcgtgcgc tacggtttgc ccggtcagtg cgctgttatg cgcgatactg
    19441 gcggcgctga taacgcaata tcaggcgaat atatgcgggt cagttaagag cctgcaatct
    19501 gtcgttgatg ctgctcaggt cgtaaacccg gcgctcaata tccagcatca ggaaattgtg
    19561 gatctcggcc tgctcaggat tatcagactc tctggcctgt aatagcaatt cattgtaacc
    19621 atgcaagccg cctgagtttt ccactggggt ggtgcctttc ccacgcaggc agctaatggg
    19681 ctgattgctc gtatcgtgtg tttgcttctc cagcacaatg acgcaatccc accagtcgcc
    19741 aaagtcatac gtgtaaacca gcttgtcacc atcattctgg agcgctgccc atagtggtgt
    19801 gattgccgca ttacccatgc tttcatcctc accccatacg cgatactcgc taccgggatc
    19861 acctttacgc cctttctcga acatatacag gtgttcgtca ttccagccaa aagccaactg
    19921 gatcaccgcg tgaagttcac taaaggggat ttgctctgga accagcacac gccgccatat
    19981 aggtggtttg ctgtctcgga tggttatctt tagctggtac atgcaaatcc tgaataaatg
    20041 cgaatcggaa ggataacgat actgacgtac tcacaattct gtaaaggtga ataaaggaaa
    20101 tttgcttaat acgcataagt tacatgcgga ataatcccgt atctacctgc gcggcgctgg
    20161 cttcttccac tggtaggcag gtgctcgcat catttcgcgg aacctgtcgc gccgggctat
    20221 atcggcatta actgagcgtt ctatctcccg ttgatctgcc tgtgtaagct ggtggcctcc
    20281 atgctcaagt ttggcgatgg tcaataaggc tatttcgcgt ggtgtcatac gtcataccct
    20341 ctggaaggat gaaacacgcc cggattaaat ttcatttttc gcgggtatga aaaaacgatg
    20401 gggcgggcag tccttaaggc tcaggattgc agagatttgg cctccccctc ccggtgatag
    20461 tttattgctt gatgtggacg gcttgctata ttggcggcga atgcaaattg tcgcagaagt
    20521 ctatcccgtt ctctgacgcc ccgtgcgggc gttttgcttt tatagagtca ggccaatgcc
    20581 tctggctgct tttcctgctt tacgctcaat aacgcccgtg attctgtcca ctaccgggct
    20641 gaatgcctgc cagtaagcca tctccataac tgataactct gcccgcttcc tgtcaaacgt
    20701 agcccagcgc atcccctttg gttttgggaa catgcgaatg tcattaaaca gattattggc
    20761 aaggtcattg ctgccccata tcgcgcatcg ctgctggcgt atcttcatgc gcatcctgtc
    20821 cagtatgtcg gcactctggc ttttatagtg aagtttccag cacgcccggc agccaatgtc
    20881 tttcttgccg atatacagct ttgcagcccg cttcatacag tgggggcaag cgtaccattc
    20941 ccggacgcca tacccggcct tcgtggttgt ggtgcgaata gcccgcgtca cgccgttgat
    21001 tgtcatggcg tagctgtcgg cttgccggaa ggcatacaac gttccgcttt cggtctgggt
    21061 ataaagctgc gtacccggtt cagcatccgc cagcctgcta cgcatgttcg caaggaatgg
    21121 caaccctata cggggcaggt cggtggtata gctgcgcgtt ctgtctctca ctggctggcc
    21181 tcctgcgaat tactgcgcat taactgcgaa cggtgcgcaa attgaatacg aaataatatg
    21241 cgtattttac tgtaaattgc gcaccaattt tgcaatttca catcaataaa gccagtaacc
    21301 gcgcgggggt tgaggatggt ttgcgcattg atatccgttt cgttttgcgg agatattttg
    21361 ttaactgcgc aattcgcaat ttactgcgca atgctcgggt ttcgtattcg gaggattttc
    21421 cactttgcgt actgcgttcg actgtagaaa cccagcgata atgcgcctta caggctggta
    21481 cgcaactgcg aatcggtttc gtatctggtg agagtgcgta cctgagttgc gtactaaaac
    21541 cttagcaaaa attagcatcg tactgatacc gccacctcca aactgattga gccaaagcca
    21601 gcaatatcag acgtcttagc cattttgcgc acgcatctgt ttgcaatgcc ggcgttagaa
    21661 ttcgtcaggt ggtacgcacg ttaaatgcgc agttttgccg cgtaccggac tgcgtactgc
    21721 gaaccaatgc cgcaaacctg aatatttttg acgacctgaa tcacaattag gctcctagcc
    21781 cgctactggc aaggacttgg ctccattaga gttttaaatc cgtcaagaac agtccaatat
    21841 tttaggctgc gctcggaacg aacatcacgg cgcagaagtg taccaaccga aacttgttaa
    21901 cccggcatcg cagcgctcac gattaagcac acgtggcggg ttttctctgg tcatcaactc
    21961 aagcaaggca ttgcctccct gcgtctctag gcggtattgc ctatcggtag tggtaatggc
    22021 atccggcaat aactttatgg cggcctggct aaagtctcgc ggtgcgccgt aaaattgcgc
    22081 atcaacaata tgaaccacat cgccgttaat cgttgtccga taacggtctg gctgtatggt
    22141 aaagccccca caatggatag cagatagtgc cggtgccgag gagatcaggc cggctgccag
    22201 aatgtatggc ttcattcttc acccaccaat tcatccagtt cagccagcgt cataggcttt
    22261 ggtacaggct tgtcaatatc acccataatg cgctggaagt tgctggcagg catatggtta
    22321 cggttctcca gtattttcgc cagcgcgata ac
//
LOCUS       DADMHC010000054        22278 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.054, whole genome shotgun sequence.
ACCESSION   DADMHC010000054 DADMHC010000000
VERSION     DADMHC010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22278)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22278)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22278
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.054"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(18..93)
                     /locus_tag="JNZ57_001696"
     tRNA            complement(18..93)
                     /locus_tag="JNZ57_001696"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(58..60),aa:His,seq:gtg)
     gene            complement(152..228)
                     /locus_tag="JNZ57_001697"
     tRNA            complement(152..228)
                     /locus_tag="JNZ57_001697"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(192..194),aa:Arg,seq:ccg)
     gene            complement(331..1716)
                     /locus_tag="JNZ57_001698"
     CDS             complement(331..1716)
                     /locus_tag="JNZ57_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY8827945.1"
                     /translation="MADNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPS
                     VLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMA
                     VGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTT
                     IIVMIVIGLGVIFFGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVEL
                     IGITAGEAKNPQVTLRSAVGKVLWRILIFYVGAIFVIVTIFPWNESGSNGSPFVLTFA
                     KIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAAMAKVSRHGVPVA
                     GVAVSIAILLIGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAA
                     IASHPFRSILFPWANYVTMAFLICVLIGMYFNEDTRMSLFVGIIFMLAVTAIYKVFGL
                     NRHGKAHKLEE"
     gene            complement(1907..2647)
                     /gene="rffM"
                     /locus_tag="JNZ57_001699"
     CDS             complement(1907..2647)
                     /gene="rffM"
                     /locus_tag="JNZ57_001699"
                     /EC_number="2.4.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     N-acetylmannosaminouronosyltransferase"
                     /protein_id="HAY8827946.1"
                     /translation="MNNNTTAPTYTLRGLQLIGWRDMQHALDYLFADGQLKQGTLVAI
                     NAEKMLTIEDNAEVRELINAAEFKYADGISVVRSVRKKYPQAQVSRVAGADLWEELMA
                     RAGKEGTPVFLVGGKPEVLAQTEAKLRNQWNVNIVGSQDGYFKPEQRQALFERIHASG
                     AQIVTVAMGSPKQEIFMRDCRLVHPDALYMGVGGTYDVFTGHVKRAPKIWQTLGMEWL
                     YRLLSQPSRIKRQLRLLRYLRWHYTGNL"
     gene            complement(2650..4002)
                     /gene="wzyE"
                     /locus_tag="JNZ57_001700"
     CDS             complement(2650..4002)
                     /gene="wzyE"
                     /locus_tag="JNZ57_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen assembly polymerase"
                     /protein_id="HAY8827947.1"
                     /translation="MSLLQFSGLFVVWLLCTLFIATLTWFEFRRVRFNFNVFFSLLFL
                     LTFFFGFPLTSVLVFRFDVGVAPPEILLQALLSAGCFYAVYYVTYKTRLRKRVADVPR
                     RPLFTMNRVETNLTWVILMGIALVSVGIFFMHNGFLLFRLNSYSQIFSSEVSGVALKR
                     FFYFFIPAMLVVYFLRQDSKAWLFFLVSTVAFGLLTYMIVGGTRANIIIAFAIFLFIG
                     IIRGWISLWMLAAAGVLGIVGMFWLALKRYGMNVSGDEAFYTFLYLTRDTFSPWENLA
                     LLLQNYDNIDFQGLAPIVRDFYVFIPSWLWPGRPSMVLNSANYFTREVLNNHSGLAIS
                     PTLIGSLVVMGGALFIPLGAIVVGLIIKWFDWLYELGNREPNRYKAAILHSFCFGAIF
                     NMIVLAREGLDSFVSRVVFFIVVFGACLMIAKLLYWLFESAGLIHKRTKSSLRTQVEG
                     "
     gene            complement(3999..5078)
                     /gene="rffT"
                     /locus_tag="JNZ57_001701"
                     /gene_synonym="wecF"
     CDS             complement(3999..5078)
                     /gene="rffT"
                     /locus_tag="JNZ57_001701"
                     /gene_synonym="wecF"
                     /EC_number="2.4.1.325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDP-N-acetylfucosamine:lipid II
                     N-acetylfucosaminyltransferase"
                     /protein_id="HAY8827948.1"
                     /translation="MTVLIHVLGSDIPHHNRTVLRFFNDALAATSEHAREFMVVGKDD
                     GLSDSCPALSVQFFPGKKSLAEAVIAKAKANRQQRFFFHGQFNPTLWLALLSGGIKPS
                     QFFWHIWGADLYELSSGLRYKLFYPLRRLAQKRVGCVFATRGDLSFFAKTHPKVRGEL
                     LYFPTRMDPSLNTMANDRQREGKMTILVGNSGDRSNDHIAALRAVHQQFGDTVKVVVP
                     MGYPPNNEAYIEEVRQAGLELFSEENLQILSEKLEFDAYLALLRQCDLGYFIFARQQG
                     IGTLCLLIQAGIPCVLNRENPFWQDMTEQHLPVLFTTDDLNEDIVREAQRQLASVDKN
                     TIAFFSPNYLQGWQRALAIAAGEVA"
     gene            complement(5075..6325)
                     /gene="wzxE"
                     /locus_tag="JNZ57_001702"
     CDS             complement(5075..6325)
                     /gene="wzxE"
                     /locus_tag="JNZ57_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid III flippase WzxE"
                     /protein_id="HAY8827949.1"
                     /translation="MSLAKASLWTAASTLVKIGAGLLVGKLLAVSFGPAGLGLAANFR
                     QLITVLGVLAGAGIFNGVTKYVAQYHDNPQQLRRVVGTSSAMVLGFSTLMALVFVLAA
                     APISQGLFGNTDYQGLVRLVALVQMGIAWGNLLLALMKGFRDAAGNALSLIVGSLIGV
                     LAYYVSYRLGGYEGALLGLALIPALVVIPAAIMLIKRGVIPLSYLKPSWDNGLAGQLS
                     KFTLMALITSVTLPVAYIMMRKLLAAQYSWDEVGIWQGVSSISDAYLQFITASFSVYL
                     LPTLSRLTEKRDITREVVKSLKFVLPAVAAASFTVWLLRDFAIWLLLSNKFTAMRDLF
                     AWQLVGDVLKVGAYVFGYLVIAKASLRFYILAEVSQFTLLMVFAHWLIPAHGALGAAQ
                     AYMATYIVYFSLCCGVFLLWRRRA"
     gene            complement(6327..7457)
                     /gene="rffA"
                     /locus_tag="JNZ57_001703"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
     CDS             complement(6327..7457)
                     /gene="rffA"
                     /locus_tag="JNZ57_001703"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /EC_number="2.6.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxygalactose transaminase"
                     /protein_id="HAY8827950.1"
                     /translation="MIPFNAPPVVGTELDYMQSAMGSGKLCGDGGFTRRCQQWLEQRF
                     GSAKVLLTPSCTASLEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDVRP
                     DTMNIDETLIEAAITDKTRVIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMST
                     YKGRALGTIGHIGCFSFHETKNYTAGGEGGATLINDKALIERAEIIREKGTNRSQFFR
                     GQVDKYTWRDIGSSYLMSDLQAAYLWAQLEAADRINQQRLALWQNYYDALAPLAKAGR
                     IELPSIPDGCVQNAHMFYIKLRDIDDRSALINFLKEAEIMAVFHYIPLHGCPAGEHFG
                     EFHGEDRCTTKESERLLRLPLFYNLSPVNQRTVIATLLNYFS"
     gene            complement(7462..8136)
                     /gene="rffC"
                     /locus_tag="JNZ57_001704"
                     /gene_synonym="wecD"
     CDS             complement(7462..8136)
                     /gene="rffC"
                     /locus_tag="JNZ57_001704"
                     /gene_synonym="wecD"
                     /EC_number="2.3.1.210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxy-D-galactose
                     acyltransferase"
                     /protein_id="HAY8827951.1"
                     /translation="MPVRASIEPLTWENAFFGVNSAIVRITSEAPLLTPDALAPWSRV
                     QAKIVASNTGELDALQQLGFSLVEGEVDLALPVNNVSDSGAVVAQETDIPALRQLASA
                     AFAQSRFRAPWYAPDASGRFYAQWIENAVRGTFDHQCLILRAASGDIRGYVSLRELNA
                     TDARIGLLAGRGAGAELMQTALNWAYARGKTTLRVATQMGNTAALKRYIQSGANVEST
                     AYWLYR"
     gene            complement(8114..8995)
                     /gene="rfbA"
                     /locus_tag="JNZ57_001705"
     CDS             complement(8114..8995)
                     /gene="rfbA"
                     /locus_tag="JNZ57_001705"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HAY8827952.1"
                     /translation="MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLA
                     GIREILIITTPEDKGYFQRLLGDGSEFGIQLEYAEQPSPDGLAQAFIIGETFLNGEPS
                     CLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVMDPERFGVVEFDDNFRAISLEEK
                     PKQPKSNWAVTGLYFYDSKVVEYAKQVKPSERGELEITSINQMYLEAGNLTVELLGRG
                     FAWLDTGTHDSLIEASTFVQTVEKRQGFKIACLEEIAWRNGWLDDEGVKRAASSLAKT
                     GYGQYLLELLRARPRQY"
     gene            complement(9062..10081)
                     /gene="rffG"
                     /locus_tag="JNZ57_001706"
     CDS             complement(9062..10081)
                     /gene="rffG"
                     /locus_tag="JNZ57_001706"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HAY8827953.1"
                     /translation="MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSL
                     APVAQSDRFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNI
                     VGTYTLLEAARAYWNTLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY
                     SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYG
                     NGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPN
                     KPHGVVHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLAN
                     ESWWK"
     gene            complement(10081..11343)
                     /gene="wecC"
                     /locus_tag="JNZ57_001707"
     CDS             complement(10081..11343)
                     /gene="wecC"
                     /locus_tag="JNZ57_001707"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HAY8827954.1"
                     /translation="MSFATISVIGLGYIGLPTAAAFASRQKQVIGVDINQYAVDTINR
                     GEIHIVEPDLASVVKTAVEGGFLRASTTPVEADAWLIAVPTPFKGDHEPDMTYVESAA
                     RSIAPVLKKGALVILESTSPVGSTEKMAEWLAEMRPDLTFPQQVGEQADVNIAYCPER
                     VLPGQVMVELIKNDRVIGGMTPVCSTRASELYKIFLEGECVVTNSRTAEMCKLTENSF
                     RDVNIAFANELSLICADQGINVWELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVA
                     QNPQQARLIRTAREVNDHKPFWVIDQVKAAVADCLAATDKRASELKIACFGLAFKPNI
                     DDLRESPAMEIAELIAQWHSGETLVVEPNIHQLPKKLTGLCTLAQLDEALATADVLVM
                     LVDHSQFKVINGDNVHQQYVVDAKGVWR"
     gene            complement(11340..12470)
                     /gene="wecB"
                     /locus_tag="JNZ57_001708"
     CDS             complement(11340..12470)
                     /gene="wecB"
                     /locus_tag="JNZ57_001708"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312746.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HAY8827955.1"
                     /translation="MKVLTVFGTRPEAIKMAPLVHALAKAPFFEAKVCVTAQHREMLD
                     QVLKLFSIVPDYDLNIMQPGQGLTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLAT
                     SLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQNLLREN
                     VADSRIFITGNTVIDALLWVRDQVMSSDTLRSELAANYPFIDPDKKMILVTGHRRESF
                     GRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPF
                     VWLMNHAWLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVTAGTVRLVGTDKQRIVE
                     EVTRLLKDENEYQTMSRAHNPYGDGQACSRILEALKNNRISL"
     gene            complement(12526..13572)
                     /gene="wzzE"
                     /locus_tag="JNZ57_001709"
     CDS             complement(12526..13572)
                     /gene="wzzE"
                     /locus_tag="JNZ57_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709589.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECA polysaccharide chain length modulation
                     protein"
                     /protein_id="HAY8827956.1"
                     /translation="MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIA
                     LAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYK
                     EFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDS
                     VKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKA
                     IYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGP
                     AFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGG
                     LIGAGVALTRRCSK"
     gene            complement(13584..14687)
                     /gene="wecA"
                     /locus_tag="JNZ57_001710"
     CDS             complement(13584..14687)
                     /gene="wecA"
                     /locus_tag="JNZ57_001710"
                     /EC_number="2.7.8.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--undecaprenyl-phosphate
                     N-acetylglucosaminephosphotransferase"
                     /protein_id="HAY8827957.1"
                     /translation="MNLLTVSTDLISIFLFTTLFLFFARKVAKKVGLVDKPNFRKRHQ
                     GLIPLVGGISVYAGICFTFGIVDYYIPHASLYLACAGVLVFIGALDDRFDISVKIRAT
                     IQAAVGIVMMVFGKLYLSSLGYIFGSWEMVLGPFGYFLTLFAVWAAINAFNMVDGIDG
                     LLGGLSCVSFAAIGMILWFDGQTSLAIWCFAMIAAILPYIMLNLGILGRRYKVFMGDA
                     GSTLIGFTVIWILLETTQGKTHPISPVTALWIIAIPLMDMVAIMYRRLRKGMSPFSPD
                     RQHIHHLIMRAGFTSRQAFVLITLAAALLASIGVLAEYSHFVPEWVMLVLFLLAFFLY
                     GYCIKRAWKVARFIKRVKRRLRRNRGGSPNLTK"
     gene            complement(14927..16186)
                     /gene="rho"
                     /locus_tag="JNZ57_001711"
     CDS             complement(14927..16186)
                     /gene="rho"
                     /locus_tag="JNZ57_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HAY8827958.1"
                     /translation="MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAK
                     SGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIR
                     PPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTAR
                     VLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTE
                     MQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNT
                     VVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEE
                     FKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGE
                     IDAMEFLINKLAMTKTNDDFFEMMKRS"
     gene            complement(16271..16372)
                     /gene="rhoL"
                     /locus_tag="JNZ57_001712"
     CDS             complement(16271..16372)
                     /gene="rhoL"
                     /locus_tag="JNZ57_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rho operon leader peptide rhoL"
                     /protein_id="HAY8827959.1"
                     /translation="MRSEQISGSSLNPSCRFSSAYSPVTRQRKDMSR"
     gene            complement(16513..16842)
                     /gene="trxA"
                     /locus_tag="JNZ57_001713"
     CDS             complement(16513..16842)
                     /gene="trxA"
                     /locus_tag="JNZ57_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017375425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HAY8827960.1"
                     /translation="MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILD
                     EIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKE
                     FLDANLA"
     gene            16973..18238
                     /gene="rhlB"
                     /locus_tag="JNZ57_001714"
     CDS             16973..18238
                     /gene="rhlB"
                     /locus_tag="JNZ57_001714"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlB"
                     /protein_id="HAY8827961.1"
                     /translation="MSKTHLTEQKFSDFALHPKVVEVLEKKGFHNCTPIQALALPLTL
                     AGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHA
                     DAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQ
                     VVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEY
                     IEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHL
                     AADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLP
                     DDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTD
                     LPKPLRLTRPRTGNGPRRTGAPRNRRRSG"
     gene            18372..19856
                     /gene="gppA"
                     /locus_tag="JNZ57_001715"
     CDS             18372..19856
                     /gene="gppA"
                     /locus_tag="JNZ57_001715"
                     /EC_number="3.6.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanosine-5'-triphosphate,3'-diphosphate
                     diphosphatase"
                     /protein_id="HAY8827962.1"
                     /translation="MGSTSSLYAAIDLGSNSFHMLVMREVAGSIQTLTRIKRKVRLAA
                     GLNSENALSNEAMERGWQCLRLFAERLQDIPPSQIRVVATATLRLAVNAGDFIAKAQE
                     ILGCPVQVISGEEEARLIYQGVAHTTGGADQRLVVDIGGASTELVTGTGAQTTSLFSL
                     SMGCVTWLERYFADRNLGQENFDAAEKAAREVLRPVADELRYHGWKVCVGASGTVQAL
                     QEIMMAQGMDERITLEKLQQLKQRAIHCGRLEELEIDGLTLERALVFPSGLAILIAIF
                     TELNIQCMTLAGGALREGLVYGMLHLAVEQDIRSRTLRNIQRRFMIDIDQAQRVAKVA
                     ANFFDQVEKEWHLEAISRDLLISACQLHEIGLSVDFKQAPQHAAYLVRNLDLPGFTPA
                     QKKLLATLLLNQTNPVDLSSLHQQNAVPPRVAEQLCRLLRLAIIFASRRRDDLVPEMT
                     LQANHELLTLTLPQGWLTQHPLGKEIIAQESQWQSYVHWPLEVH"
     gene            complement(19903..21924)
                     /gene="rep"
                     /locus_tag="JNZ57_001716"
     CDS             complement(19903..21924)
                     /gene="rep"
                     /locus_tag="JNZ57_001716"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HAY8827963.1"
                     /translation="MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCG
                     YQARHIAAVTFTNKAAREMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMK
                     ANFSLFDDTDQLALLKELTEGLIEDDKVLLQQLISTISNWKNDLKTPSQAAASAIGER
                     DRIFAHCYGLYDAHLKACNVLDFDDLILLPTLLLQRNEEVRERWQNKIRYLLVDEYQD
                     TNTSQYELVKLLVGSRARFTVVGDDDQSIYSWRGARPQNLVLLSQDFPALKVIKLEQN
                     YRSSGRILKAANILIANNPHVFEKRLFSELGYGTELKVLSANNEEHEAERVTGELIAH
                     HFVNKTQYKYYAILYRGNHQSRVFEKFLMQNRIPYKISGGTSFFSRPEIKDLLAYLRV
                     LTNPDDDSAFLRIVNTPKREIGPATLKKLGEWAMTRNKSMFTASFDMGLSQTLSGRGY
                     EALTRFTHWLAEIQRLAEREPIAAVRDLIHGMDYESWLYETSPSPKAAEMRMKNVNQL
                     FSWMTEMLEGSELDEPMTLTQVVTRFTLRDMMERGESEEELDQVQLMTLHASKGLEFP
                     YVYMVGMEEGFLPHQSSIDEDNIDEERRLAYVGITRAQKELTFTLCKERRQYGELVRP
                     EPSRFLLELPQDDLIWEQERKVVSAEERMQKGQSHLANLKAMMAAKRGK"
BASE COUNT         5597 a         6111 c         5538 g         5032 t
ORIGIN      
        1 gtcacaactt ctaataatgg ggtggctaat gggattcgaa cccacgacaa ctggaatcac
       61 aatccagggc tctaccaact gagctatagc caccactaca aatcttgtta cgcggtatta
      121 ctaccaccgc agctcaagcg ccgggactaa atggcgcgcc cgacaggatt cgaacctgag
      181 acctctgcct ccggagggca gcgctctatc cagctgagct acgggcgctt agcgccgttg
      241 cgggggtgga taatacggac ttcccccccc tctgtctagt ccctttttaa ataaattgcg
      301 cgtttggtta cggtttgtgc gttttgctgc ttattcctcc agtttatgcg ctttcccgtg
      361 gcgattaagg ccaaaaactt tataaatcgc cgtcaccgcc agcataaaga tgatgccaac
      421 aaacagcgac atacgcgtat cttcattaaa gtacatgccg atcaaaacgc aaatcaggaa
      481 tgccattgtt acgtagttgg cccacgggaa caggattgag cggaacggat ggctggcaat
      541 cgccgcttta tgtgcacgcc gaaaacgcag ctggcttatc aatatcacaa accatggcac
      601 catccccgga agcacgctgg cactgtagac gtagacaaac acacgctgcg gattgggaat
      661 gatgtagttc aggcatgagc caattagcag aatagcaata gatactgcca cacccgcaac
      721 tggtacgccg tgacgggaaa ctttcgccat cgccgccggt aactgacggt ttttcgccag
      781 tgcgtagagc atacgtccgc aactgtacat gccgctgtta cagccagaga gcgcagccgt
      841 cagcaccaca aagttgataa tgcccgccgc tgcggtaata ccgattttgg caaaagtcag
      901 tacgaacggg ctgccgttgc tgccactttc attccacggg aagatggtga cgataacgaa
      961 aatcgcgcct acgtagaaaa tcaggatccg ccacagcact ttgcctacgg cactgcgcaa
     1021 cgtcacctgc ggattcttcg cttcaccggc agtaatgcca atcagctcca cgccctggta
     1081 ggacgccacc acaatacaca gcgcggtcag gaaccctttc cagccacccg caaagaaacc
     1141 gccatgctct gtgagattgc taaaaccaat cgactgcccg ccattgccaa agccaaagaa
     1201 aatcacgccc aggccaatga caatcatcac gataatcgtg gtgactttga tcatcgcgaa
     1261 ccagaactcg atttcgccgt acaaccgcac cgccgccaga ttcgccaacg ccaccagcgc
     1321 cactgcgatc aatgcgggta tccactgcgc catctccggg aaccagaact ggacataaac
     1381 gccaatggcg gtgatttctg agatccccac cgccatccac ataaaccaat aagaccaggc
     1441 ggtgagataa ccaaagaacg ggctcatata acgatgcgca taaacggcga acgaaccggt
     1501 aaccggttcg aggaacaaca tttcgcccat tgaacgcatg atgaaaaaga cgaatagccc
     1561 ggcgatgata taggccaaca atacggatgg cccggcccat ttcaaggtac tggcggcccc
     1621 cataaacagg ccgacgccaa tggtgccccc cagggcgatg agttcgatat gtcgagcttc
     1681 cagcccacgc tgtagctctg gtttgttatc tgccataaat cctcgtgttg tgtttgcatg
     1741 ctttccggtg ttaccggtta tcgttatggg tacatcgagt gttgcgaatg ttttcgtaat
     1801 tcaggagaaa tggcaaataa agcattaaaa atttgaatgc tttgtgtaat aaaaaagcag
     1861 acaggcgacg gagtgaccac tccgtcgctt tacaaagaga ggaaaatcag aggttgccgg
     1921 tgtagtgcca gcgtaaataa cgcagcaaac gaagctgacg cttaatgcgg ctcggctgcg
     1981 aaagcaggcg gtagagccac tccattccca gcgtttgcca gattttcggt gcgcgtttta
     2041 cgtgaccggt gaaaacatcg taagtcccgc caacgcccat atacagcgca tctggatgca
     2101 ccagacggca gtcgcgcatg aagatctcct gctttggcga tcccatcgca acggtgacga
     2161 tttgcgctcc gctggcatga atgcgttcaa acagcgcctg acgctgctcg ggtttaaaat
     2221 aaccatcctg actgccaacg atattcacat tccactggtt gcgcagttta gcttcagttt
     2281 gcgccagcac ttcaggttta ccgcccacaa gaaataccgg cgtcccttct ttgcctgcgc
     2341 gcgccatcag ctcttcccag agatcggcac cggcaacgcg ggaaacctgc gcctgcgggt
     2401 actttttacg tactgaacgt acaacgctga tgccatccgc atatttaaat tcggcagcgt
     2461 taattaactc cctaacctcg gcgttatctt caatggtcag cattttttca gcattaatgg
     2521 caaccagtgt tccctgctta agctgcccgt cagcaaacag ataatcgagg gcgtgctgca
     2581 tatcacgcca accaatcaac tgtaagccac gcagcgtata ggtcggtgcc gtggtgttgt
     2641 tattcattgt tatccttcaa cctgcgtccg gagcgatgat tttgtacgtt tatgaatgag
     2701 tccggcgctt tcaaaaagcc agtacaacag ttttgcgatc atcagacatg cgccgaagac
     2761 cacgataaaa aagactacgc gtgagacaaa cgaatccagc ccttcacgtg ccagcacgat
     2821 catattgaag atcgccccaa agcagaaact gtgcaatatc gcagccttat agcgattagg
     2881 ctcgcggttg cccagctcat acagccagtc gaaccatttg atgatcagac caaccacgat
     2941 cgccccgagc gggatgaaca acgcgccgcc catcaccacc agtgagccta taagcgtagg
     3001 cgagatcgcc agtccggagt ggttattcag cacttccctg gtaaagtagt tggctgagtt
     3061 cagcaccata ctcgggcgac ccggccacag ccaggaaggg ataaagacat agaaatcgcg
     3121 gacaattgga gccaggccct ggaagtcgat gttgtcgtag ttctgcaaca gcaacgccag
     3181 attctcccac ggcgagaagg tgtcgcgagt gagatagaga aacgtataga acgcttcatc
     3241 gccgctcaca ttcattccat agcgttttag cgccagccag aacatgccca caatccccag
     3301 cacgcccgcc gccgccagca tccacaacga aatccagccg cgaataatgc caataaacag
     3361 gaagatagcg aatgcgatga tgatattggc gcgagtgccg ccgacaatca tataagtcag
     3421 caagccaaag gcgaccgtgc tgacgaggaa aaacagccac gctttgctat cctggcgcag
     3481 aaagtagacc accagcatcg ccgggatgaa aaagtaaaag aagcgtttta acgccacgcc
     3541 ggagacttca ctggagaaga tctgactgta ggagttaagc cggaacagca aaaagccgtt
     3601 gtgcatgaag aagatgccga cgcttaccag cgcgatgccc atcaggatca cccacgtaag
     3661 attggtctcc acgcggttca tggtaaacag cggacggcgc ggtacatcag caacgcgttt
     3721 gcgtaggcgg gttttgtagg tgacatagta aaccgcgtag aagcagcccg cagaaagcaa
     3781 cgcctgcaac aagatttctg gcggcgcgac accaacatca aagcgaaata ccagcacgct
     3841 ggtcagcggg aagccgaaga aaaaggtgag caaaaacagc aatgaaaaga agacattgaa
     3901 gttaaagcgc acacggcgaa actcaaacca agtcagcgtg gcaataaaca gcgtgcagag
     3961 cagccagacc acaaacaggc cactgaattg cagcagactc atgcgacctc cccggcggca
     4021 atcgccaacg cccgctgcca gccttgtaga tagttagggc taaagaaggc aatggtgttt
     4081 ttatccaccg acgccaactg gcgctgcgct tcacgcacaa tatcctcgtt gagatcgtcg
     4141 gtagtaaaca gcaccggcaa atgctgttcc gtcatatcct gccagaacgg attttcccgg
     4201 ttaagcacac aaggaatgcc cgcctgaatc agtaagcaaa gcgtaccaat gccctgctgg
     4261 cgggcaaaaa taaagtaacc aagatcgcac tgacgaagta gcgccagata ggcgtcaaat
     4321 tccagttttt cgctcaaaat ttgcagattt tcttcgctga ataactccag ccccgcctga
     4381 cgaacttcct caatgtacgc ttcgttatta ggcggatatc ccatcggcac caccactttt
     4441 accgtatcgc caaattgctg atgaacggcg cgcaaggcag caatatggtc attgctgcgg
     4501 tcaccggagt tccccaccag aatggtcatt ttcccttcac gttgccgatc gttcgccatc
     4561 gtattgagag aagggtccat ccgcgtcggg aagtacagca gttcgccccg cacctttgga
     4621 tgcgttttgg caaaaaagct caaatcaccg cgggtggcaa atacacagcc gactcgcttt
     4681 tgcgccaggc gacgtagcgg gtaaaaaagc ttatatctca agccactgga aagctcatac
     4741 aggtctgccc cccagatatg ccagaaaaac tggctgggct taatgccacc actcagcaga
     4801 gccagccaca gtgtgggatt gaactgaccg tggaaaaaaa atcgctgctg acggttagct
     4861 tttgctttcg cgatgaccgc ttccgccagc gattttttcc cagggaaaaa ttgcacagaa
     4921 agcgccggac agctatcact taagccgtcg tccttgccaa caaccataaa ctcgcgcgcg
     4981 tgctcgctcg tcgcggccag cgcgtcattg aaaaaccgca aaacggttcg gttatggtga
     5041 gggatatccg atcccagtac gtgaatcagt acagtcatgc ccgcctacgc cagagtaaaa
     5101 acacgccaca acaaagagaa aaatagacga tataagttgc catatatgcc tgcgccgcgc
     5161 ccagtgcacc atgcgcaggg attagccagt gggcaaatac catcaataaa gtgaactggc
     5221 tgacttccgc cagaatataa aaccgcagtg acgctttggc gatcaccaga taaccaaaga
     5281 cataagcgcc cacttttaac acatcaccca ctaactgcca ggcaaagaga tcgcgcatag
     5341 cggtaaattt attcgacaac agcaaccaga tagcaaaatc acgcagcaac cagacggtaa
     5401 aactcgccgc cgccactgcc ggtaagacga attttagcga tttaaccact tcccgggtga
     5461 tatcgcgctt ttccgttagc cgcgacaacg tgggcagcaa atatacgctg aacgatgccg
     5521 taatgaattg caggtaggca tcggaaatac tgctcacccc ttgccagatc cccacttcat
     5581 cccagctata ctgcgccgcc agcagtttac gcatcatgat gtaagcaaca ggcaaggtca
     5641 ccgacgtaat caacgccatg agcgtaaatt tgctcaactg ccctgccaga ccgttatccc
     5701 agctgggttt cagatagctt aacgggatga caccacgttt gatcaacatg atggcggcag
     5761 gaattaccac cagcgcggga atcagcgcca gacccagcaa cgccccttca taaccgccca
     5821 aacggtaact gacgtagtac gcgagaacgc caatcaagct gccgacaatc agcgataacg
     5881 cattacctgc ggcatcgcga aagcctttca tcagcgccag taacaggttg ccccaggcga
     5941 tccccatttg caccagcgcc actaaacgca ccagcccctg atagtcggta ttaccaaaca
     6001 atccctggct gattggcgca gctgccagca caaaaaccag cgccatcagc gtagagaaac
     6061 caagtaccat cgctgatgaa gtgccgacca cgcggcgcag ctgttgcgga ttatcatggt
     6121 actgggcaac gtatttggtt acaccgttaa agatgccagc cccggcaagc acgccgagca
     6181 cggtaatcaa ctggcggaaa tttgccgcca gcccaagccc cgccggacca aatgacaccg
     6241 ccagcaactt accgaccagt aacccggcac caatcttgac cagtgtactg gccgccgtcc
     6301 acaaggacgc ttttgccaac gacatatcag gagaagtagt tcaacaaagt cgcaattacc
     6361 gtacgctgat tgacgggcga caggttgtag aacagcggca ggcgcagcag gcgctcgctc
     6421 tctttggtgg tgcagcgatc ttcaccgtgg aactcaccaa agtgttcccc cgcagggcaa
     6481 ccgtgcagcg gaatgtaatg aaacaccgcc atgatttccg cttctttcag aaagttaatc
     6541 aacgcgctcc ggtcatcaat atcccgcagt ttaatgtaga acatatgcgc gttctgcacg
     6601 cagccatcgg gaatcgacgg cagctcgata cgcccggctt tcgccagagg cgctaacgca
     6661 tcgtagtagt tttgccacag cgccagacgt tgctggttga tacgatccgc tgcttccagt
     6721 tgcgcccaca ggtatgcagc ttgcagatcg gacatcaaat agctggagcc aatatcgcgc
     6781 caggtatatt tatcgacctg accacggaag aactggctgc ggttagtgcc cttttcacgg
     6841 atgatctcgg ctcgttcgat taacgcttta tcgttaatca gcgtcgcgcc gccttcacca
     6901 cccgccgtgt agtttttggt ttcatggaag ctaaagcagc caatatgacc aatggttccc
     6961 agtgcacgcc ctttgtaagt ggacatcacg ccctgagcgg catcttccac cacaaacaaa
     7021 ttatgctttt tcgccaacgc cataatggtg tccatttcgc aggccacacc cgcgtaatgg
     7081 accggcacga taacgcgcgt tttgtcggtg atcgctgctt caatcaacgt ttcgtcgatg
     7141 ttcatggtgt ccgggcgaac atccacaaag acgattttcg cgccacgcag cacaaaggca
     7201 ttggcggtgg agacaaaggt gtagctcggc atgatcactt catcgccagg ctggatatcg
     7261 agcagcagcg ccgccatctc cagcgaagcg gtgcaggacg gcgtcagtaa cactttggcg
     7321 ctgccaaaac gttgctccag ccactgctgg cagcgacggg taaaaccgcc atcgccacac
     7381 agtttgccgc tacccattgc cgactgcata tagtcgagtt cggttcccac caccggcggt
     7441 gcgttaaatg gaatcatgtg atcacctgta taaccagtac gcggtgcttt ctacattcgc
     7501 accactttgt atgtatcgtt taagcgcggc ggtgttgccc atttgggtcg ccacccgcaa
     7561 agttgtttta ccgcgagcat acgcccagtt tagcgccgtt tgcatcagct cagcacctgc
     7621 accgcgtcca gccagcaggc caattcgcgc atctgtcgca ttgagttccc gtaaagagac
     7681 atagccgcga atatcgccgg acgccgcacg tagaatcaga cattgatgat caaaggtgcc
     7741 gcgcacggca ttttcaatcc actgtgcata aaagcgaccg ctggcgtcag gcgcatacca
     7801 cggcgcacga aaacggcttt gcgcaaatgc ggcgctagct aactgacgta atgcgggaat
     7861 atcggtctct tgtgccacga cagcaccgct atcactgaca ttgttcacgg gtagcgccaa
     7921 atcaacttca ccttctacca gggagaatcc cagctgttgc agggcatcca gttcacccgt
     7981 atttgatgcc acaattttgg cctgcacccg tgaccacggc gctaacgcgt ctggcgtcag
     8041 gagcggtgct tcagacgtaa tgcgcacgat ggcgctgtta acaccaaaga aggcgttttc
     8101 ccaggttagt ggctcaatac tggcgcggac gggcacgaag taactccagc agatattggc
     8161 catagccagt tttcgctaat gaactggcag cacgcttcac accctcgtca tcgagccagc
     8221 cgttacgcca ggcgatctct tccaggcagg caatcttaaa gccctggcgt ttttctactg
     8281 tctgcacaaa ggtactggct tcaatcaggc tgtcgtgagt gccagtgtcc agccaggcaa
     8341 atccgcgccc gagcagttca acggtcaggt tgcccgcctc gaggtacatc tggttgatgg
     8401 aggtaatctc cagttcacca cgctccgacg gcttcacctg ctttgcgtac tccacgactt
     8461 tactgtcgta gaaataaagc ccggtcaccg cccagtttga cttcggctgt tttggctttt
     8521 cttccagcga gatagcgcgg aaattgtcgt caaactccac cacgccaaag cgttccgggt
     8581 ccatcacctg atagccaaat accgtcgccc cttccgtgcg cgccgcaaca tgacgcagct
     8641 tcggactgaa gccctgaccg aagaagatgt tatcgcccag caccagacaa gaaggttcac
     8701 cgttgaggaa ggtttcaccg atgataaagg cctgcgccag accgtccggg ctgggctgtt
     8761 cggcgtattc cagctggata ccgaactcac taccatcgcc cagcaggcgc tggaaataac
     8821 ctttatcttc cggcgtagtg atgatgagaa tttcgcggat accggccaac atcagcaccg
     8881 acagcggata gtaaatcatt ggcttatcgt aaatcggcaa cagttgcttc gatacgccgc
     8941 gcgtaatcgg atgcaatcgg gtgccggaac cgcccgccag gataatacct ttcatgtttg
     9001 cctccgctga aaattagcct ttcagaccta aacgctcgcc ctgatagctg ccgtcctgca
     9061 cctacttcca ccagctttca ttagccagat accactgcac cgttttacgc attccacttt
     9121 caaaggtttc ctgtggcagc cagccaagtt cacgggcaat tttcgaagca tcaatggcat
     9181 aacgcagatc atgccccgga cggtcagcga caaaggtgat caagtcacga tagtgcacca
     9241 cgccgtgcgg cttgttcgga gccagttctt ccagcagctc gcaaatggtt tccacaacat
     9301 cgagattctt acgctcgttg tgaccaccaa tattataggt ttcaccgact ttcccggtgg
     9361 tcgccacgca atacagcgcg cgggcgtgat cttccacata cagccagtca cggatttgct
     9421 gcccgttgcc atataccggc agcggtttac ccgccagcgc gttgaggatc atcagcggga
     9481 tcagtttttc cggaaagtgg taaggaccgt agttattcga gcagttggtg ataagcgtcg
     9541 gcagaccgta ggtccgcagc caggcgcgca ccagatggtc gctgctggct tttgacgcgg
     9601 aataagggct gctcggcgca tacggcgtgg tttcggtgaa gaaatcatcc gtcgagtgca
     9661 ggtcaccata tacttcgtcg gtggagatat gatgaaaacg gaacgctgat tttttatctt
     9721 ccgtcagcgt attccagtaa gcccgcgccg cttcaagcaa tgtataagtc ccgacaatgt
     9781 tggtttcaat aaacgctgcc gggccgtcaa tagaacggtc aacatggctt tcggctgcca
     9841 gatgcatgac acagtctggc tgatgctcag tgaatacgcg tgccagttct gcccgatcgc
     9901 agatatcaac tttctcaaag gcaaagcgat cgctttgcgc gaccggtgcc agcgacatca
     9961 ggtttccggc gtaggtcagc ttatcgacca ctaccaccgc gtcgctcgtt tcgttgatga
    10021 tataacgcac cagcgccgag ccaataaacc cggcaccacc tgttatcaga atttttctca
    10081 tcagcgccag actcctttgg catcgacgac atactgctga tggacattgt cgccattgat
    10141 aactttaaac tgactatgat cgaccagcat caccagcacg tctgccgttg ccagcgcctc
    10201 gtcaagctgc gccagagtac aaagcccggt cagttttttc ggcaactggt ggatgttagg
    10261 ctcaacaacc agagtttcgc cgctatgcca ctgggcaatc agttcagcga tttccatcgc
    10321 cgggctttcg cgcaggtcat caatattcgg tttaaacgcc agaccaaagc aggcgatttt
    10381 cagttcactg gcgcgtttat cggtagccgc caggcaatca gccaccgccg ctttcacctg
    10441 atcgataacc cagaacggtt tgtgatcgtt cacttcgcgc gcggtacgga taagccgcgc
    10501 ctgctggggg ttctgtgcca cgataaacca cggatcaaca gcaatgcagt gaccgcccac
    10561 gccagggcca ggctgaagaa tattaacgcg agggtgacga ttcgccaggc gaatcagttc
    10621 ccagacgtta atcccctgat cggcacaaat cagcgacaat tcattagcaa aagcgatatt
    10681 cacatcgcgg aagctgtttt cggtgagctt acacatttcc gccgtccgcg agttagtgac
    10741 gacacactca ccttcgagga aaattttgta cagttcgctg gcgcgggtcg aacaaaccgg
    10801 cgtcatacca ccaatcacgc gatcgttttt aatcagctcg accataacct ggcccggtaa
    10861 cacgcgttcc gggcagtaag caatgttgac gtccgcctgc tcgcccacct gctgtgggaa
    10921 agtgagatcc ggacgcatct ctgctaacca ttctgccatc ttctcggttg accccaccgg
    10981 cgaggtggat tcaaggatca ccagcgcgcc ttttttcagc actggcgcaa tggagcgagc
    11041 agccgattca acgtaggtca tatctggctc atgatcgcct ttaaacggcg tgggtacagc
    11101 aatcagccag gcatccgctt caactggcgt cgtgctcgct cgtaaaaaac cgccttctac
    11161 ggcagttttt actacgctcg ccaaatcagg ctcgacgata tggatttcgc cacgattgat
    11221 ggtatcaacc gcgtattggt tgatatcgac accaatcacc tgtttttgcc gtgaggcaaa
    11281 cgctgctgct gtaggcagcc cgatgtaacc cagtccgata acagaaatgg tcgcaaaact
    11341 catagtgata tccgattatt ttttaacgct tccagaatgc gagagcatgc ctgaccatca
    11401 ccatacgggt tatgggcgcg gctcatagtt tgatattcgt tttcgtcttt taaaagacgc
    11461 gtcacttcct cgacaattcg ctgcttatcc gtgcctacca gacgcaccgt acccgccgtc
    11521 accgcttccg gacgctcagt ggtatcgcgc atcaccagca ccggtttccc cagcgaaggc
    11581 gcttcttcct gaatgccgcc tgagtcggtc aaaatcagcc aggcgtggtt catcaaccag
    11641 acaaacggta aatactcctg gggatcgatc agaatgacat ttttcacatg ccccagaatg
    11701 cgattgaccg gctctctgac gttcgggttg agatgcaccg gatagacaat ctggatgtcc
    11761 tggtgcgtgg tggcaatgtc tgccaacgcg tggcagattt cttcaaaacc acgaccgaaa
    11821 ctctcacgcc tgtgaccggt caccagaatc atctttttat cggggtcgat aaacgggtaa
    11881 tttgccgcca gttctgaacg cagcgtgtcg ctgctcatca cctgatcacg cacccataac
    11941 agtgcatcaa tgactgtatt accagtaatg aagattcggc tatccgcaac gttttcacgc
    12001 agcaagtttt gccgggaagt ttcggttgga gagaagtgat acatcgccag atgcccggtc
    12061 aatgtacggt tagcctcttc cggccacggc gaatagagat cgcccgtgcg taaaccagcc
    12121 tcaacgtgac caacaggaat acgctgataa aacgccgcca ggctggttgc cagcgtcgtt
    12181 gttgtgtcgc cgtgaaccag cacgacgtct ggtttgaact cggcaagaat aggttttagc
    12241 ccttccagaa tccgacaggt tatctctgtc aggccctgtc ctggctgcat tatgttgaga
    12301 tcgtagtcag gtacaatgga aaagagtttc agcacctgat cgagcatctc ccgatgctgc
    12361 gcagtgacgc aaactttagc ctcaaaaaaa ggagcttttg ccaacgcatg caccaacgga
    12421 gccatcttga tggcttccgg gcgcgtacca aatacagtca gtactttcac atcgattctc
    12481 ttcgaataag cggcgagcgc ctttgcgctc gccgcagcag tgttgctatt tcgagcaacg
    12541 gcgggttaat gcgacaccag ccccgatcag ccccccgaca atgccccaca taatcatcag
    12601 gaaggcacga cgtgggctat cgcgttttac cggttcttcc ggcgtacgca aatagcgata
    12661 ggtctgaaaa cgcggatcca gggttggacc aacattcagg gtgtttaaca tggcccgatt
    12721 ctgatcatag tcgagatcaa aggccggacc gacggcctgt aaattttcca gtcgagcctg
    12781 gagcattgga cgcccaagca ggaacatttc tgaatcaggt aattcctcgg caggcacatc
    12841 tgtcgcactg cgcgaaatat tatgctgctc agcaattttc agcgcctgct caatgctgtt
    12901 catccggcgg tcgtagatgg ctttcgccac ctcttcctga cgcttcacct gagctttcat
    12961 ctggatggtg cgtgccgccc atgcgccttt cagctcatca ttcagatggc tggctgcacg
    13021 ctggctggca aaagcaacat actgacgtaa caggttatta gcgtcaggcg cggtttcggc
    13081 aataagcttc acgctgtcat tgaccgcgcg ggtaaagtct ccggggataa actggatgtt
    13141 gttaatcatt tcatccagca acgccgcatc ggctttgctg ttgcccacca tccgctgttt
    13201 gtaatagtcg gtttgcagcc agaactctct gcgggtatcc cacgaggcca gttgcataac
    13261 aaactcttta taggcttcgt ccatgaccga tggttgatcg gcagaagcca tgtttgaacg
    13321 gacatccagg ttacgcaaaa attgctgctg cgagtaatat ccccccagca tattcaccgt
    13381 tggacgatcg gtaatcgccg tcgagctcca ctcctgacga gcaaaaaaag tatacgccag
    13441 cgcgattaac gcaaacgcca gccccatgcc aataatccat agcttcccag cccacaaggt
    13501 acgaaacaac ccacgaatat ccagttcatt ttcagcgtct tcggccggtt tcccaggcat
    13561 tggttgtgtc atcacatcct catttatttg gttaaattgg ggctgccacc acgatttcta
    13621 cgcagtctgc gttttacgcg cttaataaag cgagcaactt tccaggcacg cttaatgcaa
    13681 tatccataga ggaagaatgc tagcaaaaag agcaccagca tgacccactc cgggacaaaa
    13741 tgagaatatt ctgccagcac gccaatggaa gcgagcagtg ctgcggcaag ggtaatcagc
    13801 acaaacgcct gacgggaagt aaacccggca cgcatgatca aatggtgaat atgctgacgg
    13861 tcaggagaga atgggctcat gcctttacgc aggcgacggt acataatcgc caccatatcc
    13921 attagcggaa tggcgattat ccacaaagcg gtaaccgggc tgatgggatg ggttttgccc
    13981 tgggtcgttt cgagcaggat ccagataacg gtaaaaccaa tcagcgtact gcccgcatca
    14041 cccataaaga ctttgtagcg gcgacccagg ataccaaggt taagcatgat gtatggcagg
    14101 atggcggcga tcatcgcaaa gcaccagatt gcgaggctgg tttgcccgtc gaaccacaaa
    14161 atcataccga ttgctgcaaa cgagacgcag gacaacccgc ccagcaagcc atcaatgcca
    14221 tcaaccatgt tgaacgcatt aatggccgcc cagacggcaa atagcgtcag gaagtaacca
    14281 aacggtccga gcaccatctc ccaggagcca aagatataac ccaggctact gagataaagt
    14341 ttgccgaaca ccatcataac aatgccaaca gcggcctgta tggtggcacg gatttttacg
    14401 ctgatatcaa aacggtcatc cagcgcgcca atgaaaacaa gcacaccggc acaagcgaga
    14461 tagagagatg catgcggaat atagtaatcg acaattccga acgtgaagca aatccctgcg
    14521 taaaccgaaa tccccccaac gagaggtatc aatccctggt gacgtttgcg gaagtttggt
    14581 ttatccacta aaccgacttt ttttgccacc ttacgggcaa aaaacagaaa cagtgtcgtg
    14641 aataaaaaaa tactgatgag atcagtactc actgtcagta aattcacaat gcatgctctc
    14701 agagaaaatt attagcagaa gtataaccac gaagaccttt attcagaagg gaaagtccgt
    14761 tccgaaccca ccagccctgt gcaaaaatta accatttgat atgcaaattg cataacatgc
    14821 cagcaaattc caggaatttt cctaacatcg ccagcgcggc attaagatta cagatataaa
    14881 agcaaaacgc cacgtaaaca cgtggcgttt ttggcataag acaaatttat gagcgtttca
    14941 tcatttcgaa gaaatcgtca ttggtcttgg tcatggccag tttattaatg aggaattcca
    15001 ttgcatcgat ttcgcccatc gggtgaatga ttttgcgcag gatccacatt ttctgcagtt
    15061 cttcctgagt cgtgagcagc tcttctttac gggtaccgga acggttgtag tcgatagccg
    15121 ggaagacgcg tttttcagcg atcttacgag agaggtgcag ttccatgttg cctgtacctt
    15181 taaactcttc gtaaataact tcgtccattt tagaaccggt atcgataagc gccgtcgcga
    15241 taatggtcag gctgccgccc tcttccacgt tacgcgccgc accgaagaag cgtttcggac
    15301 gatgaagggc attggcgtcc acaccaccgg tcaacacttt acctgacgcc ggaacaacag
    15361 tgttgtaagc gcgcgccaga cgagtgatgg agtcgagcag aatgataacg tctttcttgt
    15421 gctcaaccag gcgtttggcc ttctcgatca ccatttccgc aacctgaacg tggcgagatg
    15481 cgggttcgtc aaaggtagaa gcaacaactt caccttttac cagacgctgc atctcggtta
    15541 cttcttccgg acgttcgtcg atcagcagaa ccatcagcac acaatccggg tggttgtaag
    15601 caatgctctg agcaatgttc tgcagcagca tagttttacc ggctttcggc ggtgccacaa
    15661 tcagaccacg ctgaccacga ccgataggtg atgccagatc cagtacgcga gcggttaaat
    15721 cttccgtaga accgttacca cgttccatac gcagacgaga gtttgcgtgc agcggggtta
    15781 agttctcaaa gaggattttg ttgcgggcgt tttcaggttt gtcgaagtta acttcgttaa
    15841 ctttcagcag cgcaaaatag cgttcacctt ctttcggcgg gcgaatctta ccagagatgg
    15901 tatcaccagt gcggaggttg aaacggcgga tttggctagg ggaaacgtag atgtcatcag
    15961 gaccggcgag gtaggagctg tctgcggaac ggaggaaacc aaatccatcc tgcaatatct
    16021 ccagtacgcc atcaccaaag atatcttcgc cactctttgc gtgctgcttc aggatggcaa
    16081 aaataatgtc ctgcttacgc atacgagcca ggttttccag ccccatattt tcgccgagag
    16141 tgatcagctc agaaaccggc gtattcttta attcggtaag attcatagtg gtgtgagttc
    16201 ttaaacttgg ggtaaatctc gaacttaatg ttgtgaatgg tatggcagga tcatccatgc
    16261 ctgtttacgg tcatcgactc atgtcttttc gctgcctggt cacaggagag tacgcagaac
    16321 tgaaacgaca agacggattg agtgacgagc cagaaatctg ttcacttcgc atttaagata
    16381 aaacgggaag cgttggaaat tacaagattc aaacttaata aggtatgttt aatacgaagt
    16441 caacactaag ttagcatgac tcacgccggg cgtccagttt ttagcgacgg ggcacccgaa
    16501 catgaaattc ccttacgcca ggttagcgtc gaggaactct ttcaactgac ctttagacag
    16561 tgcacccact ttggttgccg ccacttcacc gtttttgaac agcagcagag tcgggatacc
    16621 acggatgcca tatttcggcg cagtgccagg gttttgatcg atgttcagtt ttgcaacggt
    16681 cagtttgccc tgatattcgt cagcgatttc atccagaatc ggggcgatca ttttgcacgg
    16741 accgcaccac tctgcccaga aatcgacgag gatcgccccg tccgctttga gtacatccgt
    16801 gtcaaaactg tcgtcagtca ggtgaataat tttatcgctc atatataact ccacaggaat
    16861 aagcctggcg tgttggtttc gttgttggtg taacattaac caactaaagg ttgactttat
    16921 ttcaccggat acgctttcgt aaagcaatag taagctgata ttctaccaca ctatgagcaa
    16981 aacacattta acagaacaga agttttccga cttcgccctg catccgaaag ttgtagaagt
    17041 ccttgaaaaa aaagggtttc ataactgtac gcccattcag gcactggccc ttccgctgac
    17101 gctggcgggt cgtgacgtag ccgggcaggc gcaaaccggt accgggaaaa cgatggcgtt
    17161 tcttacgtca acgtttcatt atcttctctc tcatcctgcg attgccgatc gcaaggtgaa
    17221 tcaaccacgt gccttaatta tggcaccgac gcgtgaactt gccgtgcaga tccatgccga
    17281 cgcagaaccg ctggcggaag ctaccggcct gaagctgggt ctggcttacg gtggtgatgg
    17341 ctacgacaaa cagctgaaag tgctggaaag cggcgttgac attctgattg gcactacggg
    17401 gcgtttaatt gactacgcca agcagaacca cattaacctc ggtgccattc aggtggtggt
    17461 actggacgaa gccgatcgca tgtacgatct gggctttatt aaagatatcc gctggctgtt
    17521 ccgccgtatg ccgcctgcaa accagcgcct caacatgctg ttctccgcca cgctttcgta
    17581 ccgggtacgt gaactggcgt tcgagcagat gaacaatgcc gaatatattg aagtggaacc
    17641 ggaacagaaa acgggccacc gtattaaaga agagcttttc tacccttcta acgaagaaaa
    17701 aatgcgtttg ctgcaaacgc tgatcgaaga agagtggcca gacagagcga ttattttcgc
    17761 caataccaaa caccgttgtg aagagatctg gggccacctg gcggcagatg gtcatcgtgt
    17821 cggtttgttg acaggcgatg tcgcgcagaa aaaacgtctg cgtattcttg atgaatttac
    17881 ccgtggcgat ctggatattc tggttgccac cgacgttgcc gcgcgtggtt tgcatattcc
    17941 ggcagtgacg cacgtcttta actacgattt acccgatgac tgtgaagatt acgttcaccg
    18001 tattggtcgt acaggtcgcg caggcgcaag cggtcactct atcagcctgg cgtgtgaaga
    18061 gtatgcattg aatttgcctg ctattgagac ctatattggt cactcaattc cggtaagcaa
    18121 atacaatccg gacgcattga tgaccgatct gccaaaaccg ctgcgcctca cgcgcccacg
    18181 tacaggcaat ggtccgcgtc gtactggcgc tccgcgtaat cgtcgtcgtt caggttaaat
    18241 aaaatgtcat actcaaaatc attcaaactg tatcaagatg gcaagagaat gaatcccgat
    18301 gagcatactg tagtaagtga ttcaggtgaa agaatgcagc caacacagag acagattgaa
    18361 ggatgaagag tatgggttcc acctcgtcgc tgtatgcagc cattgatctc ggttcgaata
    18421 gttttcatat gctggttatg cgcgaggtgg ctggaagcat ccagacgctg acgcgaataa
    18481 aacgcaaagt gcgtctggct gctggcctga atagcgaaaa tgccctgtct aatgaagcaa
    18541 tggagcgcgg ttggcaatgt ctgcgcctgt ttgctgaacg tctgcaagat atccctccct
    18601 cgcaaattcg cgttgtcgct acggcgacat tacgtcttgc cgtcaatgcg ggtgatttta
    18661 ttgccaaagc gcaggaaatc ctcggttgtc cggtacaggt gatcagcggt gaagaggaag
    18721 cacgtctgat ttatcagggc gttgctcaca caactggcgg tgccgatcag cgcctggtgg
    18781 tggatatagg cggtgccagt actgaactgg taaccggcac gggtgcacaa accacctcgt
    18841 tgttcagcct gtcgatgggc tgcgtcacct ggctggaacg ctattttgcc gatcgtaatc
    18901 tggggcagga aaattttgat gctgcagaaa aagcggcacg cgaagtgtta cgtccggttg
    18961 ccgatgaatt acggtatcac ggctggaaag tgtgcgttgg tgcttccggc accgtgcagg
    19021 cgttacagga aatcatgatg gcacagggga tggatgaacg cattaccctg gaaaagttgc
    19081 agcaattgaa acagcgagcc attcattgcg gtcggctgga ggaactggag attgacgggc
    19141 tgacgctgga acgtgcgtta gtgttcccga gtggtctggc gatcctgatc gccattttta
    19201 ccgaactgaa tattcagtgt atgaccctgg cgggcggtgc gctgcgtgaa ggcctggtct
    19261 acggcatgtt gcatctggcc gtcgagcagg atattcgcag ccgtacgctg cgtaatattc
    19321 agcgccgctt tatgatcgat attgatcagg cgcagcgcgt agccaaagtt gcggctaact
    19381 tcttcgatca ggtggaaaag gaatggcatc ttgaagcaat aagccgcgat ttgctcatca
    19441 gcgcctgtca gcttcatgaa atcggcctga gcgttgactt taaacaagcg ccgcaacacg
    19501 ctgcttatct ggtgcgtaat ctggatcttc ccggttttac ccccgcacag aaaaaattgc
    19561 tggcgacgct actgctcaac cagactaatc cggtcgatct ctcatcgctg catcagcaaa
    19621 atgccgtacc gccgcgcgtc gcagaacaac tctgccgttt actccgcctg gccatcattt
    19681 ttgccagccg tcgccgtgac gatctcgtgc cagagatgac attacaggct aaccatgaac
    19741 tgttgacctt gacgcttccg caaggttggc taacccaaca tccgctgggt aaagagatta
    19801 ttgctcagga aagccagtgg cagagctatg tccactggcc gctggaagtg cattaatgag
    19861 taagtgccgg atgcgatgct gacgcatctt ttccggcctt gattatttcc ctcgttttgc
    19921 cgccatcatc gctttcagat tcgccagatg gctttgccct ttctgcatcc gttcttcggc
    19981 gctgaccact ttgcgctcct gttcccaaat cagatcatcc tgcggcagct ccagcaaaaa
    20041 gcggctcggc tccgggcgca ccagctcgcc gtactgacgg cgttctttac acagcgtaaa
    20101 ggtcaattcc ttctgggcgc gggtaatgcc gacataggcc agccgccgct cctcatcgat
    20161 attatcttca tcgatgctac tctggtgcgg caaaaaccct tcttccatac cgaccatgta
    20221 gacataagga aactccagcc cttttgacgc gtgcagagtc atcagttgca cctgatccag
    20281 ctcttcttca ctctcaccac gctccatcat gtcgcgcaaa gtaaagcgcg tcaccacctg
    20341 ggtgagcgtc atcggctcat ccagttcgct gccttccagc atctccgtca tccagctaaa
    20401 cagttggttg acgttcttca tgcgcatttc ggcggctttc gggctgggcg atgtttcgta
    20461 cagccaggat tcataatcca tgccgtggat cagatcgcgc accgcggcaa tcggctcccg
    20521 ctccgccaga cgctggattt ctgccaacca gtgagtaaag cgggtcaatg cttcataacc
    20581 acgtccgcta agcgtctgac tcaggcccat atcaaagctg gcggtaaaca tgcttttatt
    20641 gcgcgtcatc gcccactcac ccagcttttt cagcgtcgcc gggccaatct ctctcttcgg
    20701 cgtgttaacg atacgcagaa atgcgctgtc atcgtccggg ttagtcagca cgcgcagata
    20761 agccagcaag tccttgattt caggacgaga gaaaaacgac gtaccaccag aaattttgta
    20821 cgggatgcgg ttttgcatca ggaatttttc aaacactcgc gactgatggt taccgcgata
    20881 aagaatagcg taatatttgt actgcgtttt attgacgaag tgatgcgcaa tcagttcacc
    20941 agtgacgcgc tcggcttcat gttcttcgtt attcgcgctt aaaactttaa gctctgtgcc
    21001 gtaacccagt tcggagaaca gacgcttctc aaagacgtgc gggttattgg cgatcaggat
    21061 gttcgccgct ttcaaaatac gtccggaaga gcggtagttc tgctcaagct taatcacctt
    21121 cagcgccgga aaatcctgac tcagcagcac caggttttgt ggacgtgcgc cgcgccagga
    21181 gtagatcgac tggtcgtcat cgcccaccac ggtaaagcgc gcgcggctgc ccaccagcag
    21241 tttcaccagt tcatactggc tggtgttggt gtcctgatac tcatccacca gcagatagcg
    21301 aattttgttc tgccagcgct cgcggacttc ttcattgcgt tgcagcagca acgtcggcaa
    21361 taaaatcaga tcatcgaagt cgagaacatt gcacgctttc aggtgtgcat catacagccc
    21421 ataacaatgg gcaaaaatac ggtcccgctc gccaatcgca ctggctgccg cctgggacgg
    21481 tgttttgaga tcgttcttcc agttagagat agtcgaaatc aactgttgca ggagaacttt
    21541 gtcatcttca atcagccctt cggtcaactc tttgagcaac gccagctgat cggtatcgtc
    21601 aaacagcgaa aagttcgcct tcatccccag cgccgcatac tcacgcttga tgatatccag
    21661 ccccagcgtg tggaaggttg agatcatcag cccacgcgcc tctttgcgac ccagcgtctg
    21721 tccgacacgc tctttcatct cgcgcgccgc cttattggta aaggtcaccg ccgcgatatg
    21781 tcgcgcctga taaccgcaac cgcggatcag atgggcgatt ttattggtga tcacacgagt
    21841 tttaccggaa cccgcgcccg ccagcaccag gcaggggccg gtaacgaatt cgacagcttg
    21901 ttgttggccg gggtttagac gcataggtgt attgctcaat cttcgaacgg ggggaggatt
    21961 gtagcagaat cgcatttgaa tgtgaccgcg tgtaagccgc taaccggttg gctgcggatg
    22021 tttaaatcag agagggaaga ccgaaaccgg agttcatcgt gaatccatta gacttagaaa
    22081 atatcgggtc gtaacgttgt gttattactt tttcagagtt tactaaggag aggtgtactc
    22141 gtggcgatta atttcagtcc taaggttggt gaaatactgg aatgcaactt tggtaactat
    22201 cctgttagcc agaatggaca gttcagcacc acgtattacg atggccgcat tcctcctgaa
    22261 atgataaaaa acaggtta
//
LOCUS       DADMHC010000055        22134 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.055, whole genome shotgun sequence.
ACCESSION   DADMHC010000055 DADMHC010000000
VERSION     DADMHC010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22134)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22134)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22134
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.055"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            237..1241
                     /locus_tag="JNZ57_001717"
     CDS             237..1241
                     /locus_tag="JNZ57_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708899.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein CblD"
                     /protein_id="HAY8827964.1"
                     /translation="MTYDLASGRADYYFWKDEASAGNNGYMWYECSYPDLQQTCTANG
                     NISTVQIYLTEQRSGMRWPVKLKGFKTAIVSSDEAPPGCKGGKGLQTNLKDSNRSSCT
                     EDGQHYYIYDTKFLTLYLEQTEMKNLPIGGVWKGKVKLHSNSPAQDYFANITLNTLDP
                     NHIDVFFPEFAHATPRVQLDLHPTGSVNGSNYAQDLTMLDMCLYDGFNGNAISYEIML
                     KDEGRPAAGRRDGDFSIYRQGGTSTDEGERIDYRVKMYNPETGGQIDVRNNENMVWNS
                     INLKSVRPVVLPGIRYAVMCVPTPLTLAVDKFSVMDKQAGYYMGKLSVIFTPSLPTIN
                     "
     gene            complement(1329..2627)
                     /locus_tag="JNZ57_001718"
     CDS             complement(1329..2627)
                     /locus_tag="JNZ57_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708898.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8827965.1"
                     /translation="MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAEPTLMEELNIST
                     QQYSYIIAAYSAAYTVMQPVAGYVLDVLGTKIGYAMFAVLWAVFCGATALAGSRGGLA
                     IARGAVGAAEAAMIPAGLKASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVM
                     HSWQMAFIISGALSFIWAMAWLIFYKHPRDQKHLTDEERDYIINGQEAQHQVSTAKKM
                     SVGQILRNRQFWGIALPRFLAEPAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFA
                     DLGCILGGYLPPLFQRWFGVNLIVSRKMVVTLGAVLMIGPGMIGLFTNPYVAIMLLCI
                     GGFAHQALSGALITLSSDVFGRNEVATANGLTGMSAWLASTLFSLVVGALADTIGFSP
                     LFAVLAVFDLLGALVIWTVLQNKPAIEVAQESHNDPAPQH"
     gene            3110..4522
                     /gene="uxaC"
                     /locus_tag="JNZ57_001719"
     CDS             3110..4522
                     /gene="uxaC"
                     /locus_tag="JNZ57_001719"
                     /EC_number="5.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019077755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronate isomerase"
                     /protein_id="HAY8827966.1"
                     /translation="MTPFMTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPQQIAED
                     YRFKNLYDIWLKGDHYKWRAMRTNGVAERLCTGDASDREKFDAWAATVPHTIGNPLYH
                     WTHLELRRPFGITGKLLSPSTADEIWNECNELLAQDNFSARGIMQQMNVKMVGTTDDP
                     IDSLEHHAEIAKDGSFTIKVLPSWRPDKAFNIEQATFNDYMAKLGEVSDTDIRRFADL
                     QTGLTKRLDHFAAHGCKVSDHALDVVMFAEANEAELDSILARRLAGETLSEHEVAQFK
                     TAVLVFLGAEYARRGWVQQYHIGALRNNNLRQFKLLGPDVGFDSINDRPMAEELSKLL
                     SKQNEENLLPKTILYCLNPRDNEVLGTMIGNFQGEGMPGKMQFGSGWWFNDQKDGMER
                     QMTQLAQLGLLSRFVGMLTDSRSFLSYTRHEYFRRILCQMIGRWVEAGEAPADINLLG
                     EMVKNICFNNARDYFAIELN"
     gene            4537..6024
                     /locus_tag="JNZ57_001720"
     CDS             4537..6024
                     /locus_tag="JNZ57_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001199350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="altronate dehydratase"
                     /protein_id="HAY8827967.1"
                     /translation="MQYIKIHALDNVAVALADLAEGTEVSVDNQTVTLRQDVARGHKF
                     ALTDIAKGANVIKYGLPIGYALADIAAGEHVHAHNTRTNLSDLDQYRYQPDFQDLPAQ
                     AADREVQIYRRANGDVGVRNELWILPTVGCVNGIARQIQNRFLKETNNAEGTDGVFLF
                     SHTYGCSQLGDDHINTRTMLQNMVRHPNAGAVLVIGLGCENNQVAAFRETLGDIDPER
                     VHFMICQQQDDEIEAGIEHLHQLYNVMRNDKREPGKLSELKFGLECGGSDGLSGITAN
                     PMLGRFSDYVIANGGTTVLTEVPEMFGAEQLLMDHCRDEATFEKLVTMVNDFKQYFIA
                     HDQPIYENPSPGNKAGGITTLEDKSLGCTQKAGSSVVVDVLRYGERLKTPGLNLLSAP
                     GNDAVATSALAGAGCHMVLFSTGRGTPYGGFVPTVKIATNSELAAKKKHWLDFDAGQL
                     IHGKAMPQLLEEFIDTIVEFANGKQTCNERNDFRELAIFKSGVTL"
     gene            6107..6658
                     /locus_tag="JNZ57_001721"
     CDS             6107..6658
                     /locus_tag="JNZ57_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgjV family protein"
                     /protein_id="HAY8827968.1"
                     /translation="MTAYWLAQGVGFIAFLIGITTFFNRDERRFKKQLSVYSAVIGVH
                     FFLLGTYPAGASAILNAIRTLITLRTRSLWVMAIFIVLTGGIGLAKFHHPVELLPVIG
                     TIVSTRALFRCKGLTMRCVMWFSTCCWVIHNFWAGSIGGTMIEGSFLLMNGLNIIRFW
                     RMQKRGIDPFKVEKTPPAVDERG"
     gene            complement(6663..7907)
                     /gene="sstT"
                     /locus_tag="JNZ57_001722"
     CDS             complement(6663..7907)
                     /gene="sstT"
                     /locus_tag="JNZ57_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HAY8827969.1"
                     /translation="MTTQRSPGLFRRLAHGSLVKQILVGLVLGILLAWISKPAAEAVG
                     LLGTLFVGALKAVAPILVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALAAVVF
                     SFAFPSTLHLSSSAGDISPPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLG
                     FALRHGNETTKNLVNDLSNAVTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQL
                     LVVLVGCMLLVALVVNPLLVWWKIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMA
                     LCEKLNLDRDTYSVSIPLGATINMAGAAITITVLTLAAVNTLGIPVDLPTALLLSVVA
                     SLCACGASGVAGGSLLLIPLACNMFGISNDIAMQVVAVGFIIGVLQDSCETALNSSTD
                     VLFTAAACQAEDDRLANSALRN"
     gene            complement(8523..9488)
                     /gene="alx"
                     /locus_tag="JNZ57_001723"
     CDS             complement(8523..9488)
                     /gene="alx"
                     /locus_tag="JNZ57_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001098790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family membrane protein Alx"
                     /protein_id="HAY8827970.1"
                     /translation="MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGAHAMTMKQAAAW
                     SLVWVTLSLLFNAAFWWYLVQTEGRAVADPQALAFLTGYLIEKSLAVDNVFVWLMLFS
                     YFSVPAALQRRVLVYGVLGAIVLRTIMIFTGSWLISQFDWILYIFGAFLLFTGVKMAL
                     AHEDESGIGNKPLVRWLRGHLRMTDTIDNEHFFVRKNGLLYATPLMLVLILVELSDVI
                     FAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAERFSMLKYGLAVILVFI
                     GIKMLIVDFYHIPIAVSLGVVFGILVMTFIINAWVNYRHDKQRGE"
     gene            complement(9772..10776)
                     /locus_tag="JNZ57_001724"
     CDS             complement(9772..10776)
                     /locus_tag="JNZ57_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HAY8827971.1"
                     /translation="MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQ
                     AQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNALHFSQTQLFLSHKIHVICEKPL
                     ASNLAEVDAAIACARENQVVLFEAFKTASLPNFHLLRQALPKVGKLRKVFFNYCQYSS
                     RYQRYLDGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAH
                     GVVVMDYGDFSVTLLHSKVSDSVLESEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDL
                     TQPQHINTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL
                     "
     gene            complement(10837..11520)
                     /locus_tag="JNZ57_001725"
     CDS             complement(10837..11520)
                     /locus_tag="JNZ57_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001183047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vancomycin high temperature exclusion protein"
                     /protein_id="HAY8827972.1"
                     /translation="MQPRLLLRICFSRRTLKIACLLLLVAGATIFIADRVMVNASKQL
                     TWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDE
                     ASGMQKALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWL
                     AKQYSIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMIGPF
                     SEHGCPAKE"
     gene            complement(11597..12100)
                     /locus_tag="JNZ57_001726"
     CDS             complement(11597..12100)
                     /locus_tag="JNZ57_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311994.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HAY8827973.1"
                     /translation="MSNLTYLQGYPEQLLSQVRTLINEQRLGDVLAKRYPGTHDYATD
                     KALWQYTQDLKNQFLRNAPPINKVMYDNKIHVLKNALGLHTAVSRVQGGKLKAKAEIR
                     VATVFRNAPEPFLRMIVVHELAHLKEKEHNKAFYQLCCHMEPQYHQLEFDTRLWLTQL
                     SLGQDKI"
     gene            12185..13321
                     /gene="rlmG"
                     /locus_tag="JNZ57_001727"
     CDS             12185..13321
                     /gene="rlmG"
                     /locus_tag="JNZ57_001727"
                     /EC_number="2.1.1.174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (guanine(1835)-N(2))-methyltransferase
                     RlmG"
                     /protein_id="HAY8827974.1"
                     /translation="MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEI
                     RGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTAD
                     YPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLG
                     PTTTTLAWKKARLINCTFNEPPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGAR
                     FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM
                     PEALDRSEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINS
                     ELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR"
     gene            13606..13920
                     /locus_tag="JNZ57_001728"
     CDS             13606..13920
                     /locus_tag="JNZ57_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mRNA interferase HigB"
                     /protein_id="HAY8827975.1"
                     /translation="MHLITQKALKDAAEKYPQHKTELVALGNTIAKGYFKKPESLKAV
                     FPSLDNFKYLDKHYVFNVGGNELRVVAMVFFESQKCYIREVMTHKEYDFFTAVHRTKG
                     KK"
     gene            13917..14333
                     /gene="higA"
                     /locus_tag="JNZ57_001729"
     CDS             13917..14333
                     /gene="higA"
                     /locus_tag="JNZ57_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin HigA"
                     /protein_id="HAY8827976.1"
                     /translation="MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLND
                     PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLADLPEIG
                     SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID"
     gene            complement(14378..16396)
                     /locus_tag="JNZ57_001730"
     CDS             complement(14378..16396)
                     /locus_tag="JNZ57_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 2,4-dienoyl-CoA reductase"
                     /protein_id="HAY8827977.1"
                     /translation="MSYPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFY
                     AERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQI
                     LHTGRYSYQPHLVAPSALQAPINRFVPHELTHEEILQLIDDFAHCAQLAREAGYDGVE
                     VMGSEGYLINEFLTLHTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSM
                     LDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKL
                     KGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQSGRADEINT
                     CIGCNQACLDQIFVGKVTSCLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAIN
                     AAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYHRMIEVTGVTLKLNHTVT
                     ADQLQAFDETILASGIVPRVPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGF
                     DTAMYLSQPGESTSQNIARFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKAS
                     KPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVIC
                     AGQEPNRALAQPLIDSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI"
     gene            complement(16822..19173)
                     /gene="ygjK"
                     /locus_tag="JNZ57_001731"
                     /pseudo
     CDS             complement(16822..19173)
                     /gene="ygjK"
                     /locus_tag="JNZ57_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417551.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
     gene            complement(19190..20260)
                     /gene="ygjJ"
                     /locus_tag="JNZ57_001732"
     CDS             complement(19190..20260)
                     /gene="ygjJ"
                     /locus_tag="JNZ57_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YgjJ"
                     /protein_id="HAY8827978.1"
                     /translation="MKLITAPCRALLALPFCYAFSAAGEEARPAEHDDTKTPAITSTS
                     SPSFRFYGELGVGGYMDLEGENKHKYSDGTYIEGGLEMKYGSWFGLIYGEGWTVQADH
                     DGNAWVPDHSWGGFEGGINRFYGGYRTNDGTEIMLSLRQDSSLDDLQWWGDFTPDLGY
                     VIPNTRDIMTALKVQNLSGNFRYSVTATPAGHHDESKAWLHFGKYDRYDDKYTYPAMM
                     NGYIQYDLAEGITWMNGLEITDGTGQLYLTGLLTPNFAARAWHHTGRADGLDVPGSES
                     GMMVSAMYEALKGVYLSTAYTYAKHRPDHADDETTSFMQFGIWYEYGDGRFATAFDSR
                     FYMKNASHDPSDQIFLMQYFYW"
     gene            complement(20394..21827)
                     /locus_tag="JNZ57_001733"
                     /pseudo
     CDS             complement(20394..21827)
                     /locus_tag="JNZ57_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311987.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
     gene            complement(21890..>22134)
                     /locus_tag="JNZ57_001734"
     CDS             complement(21890..>22134)
                     /locus_tag="JNZ57_001734"
                     /EC_number="3.2.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="beta-galactosidase subunit beta"
                     /protein_id="HAY8827979.1"
                     /translation="YYLQGQQKIEYAPKETLQVVEYYRDETDREYLKGCGETVEVHEG
                     QIVICDIHEAYRFICNNAVKKVVLKVTIEDGYFHNK"
BASE COUNT         5481 a         5788 c         5749 g         5116 t
ORIGIN      
        1 cttaagtgtc cactgagtgt tgaaaagaaa cgcgccagca ttcgttacag cggagatgtt
       61 acttgtagtg tggtgactta ttcacaatta ccggagttga aacagcctaa attacgtgga
      121 aacgttcaga cggcgcaaag ggaggttgca ccatgagaaa tcgattgatt gcggcgatat
      181 tgggcttgtt tggcacgctc actggcgttc aggcagctcc tgacgtgacc agtgaaatta
      241 cgtatgattt ggcatctggt agagcggatt attacttctg gaaggatgaa gcgtcggcag
      301 gaaataatgg atatatgtgg tatgaatgtt cgtatcctga cctccaacaa acctgtacag
      361 ctaatggaaa tatatcgaca gtacaaatct atttaactga acaacgcagt gggatgcgtt
      421 ggccggtaaa actcaaagga tttaaaacag ccattgtaag tagcgatgaa gcgccgccag
      481 gatgcaaggg gggcaaaggg cttcagacga atcttaagga ttctaataga tcttcatgta
      541 cagaagatgg tcaacattat tatatatacg atacaaagtt tcttacgctc taccttgagc
      601 agacagagat gaagaatttg ccgattggtg gcgtctggaa ggggaaagtt aaattacatt
      661 cgaacagccc ggcccaggac tatttcgcaa atattaccct gaatacgctc gaccccaacc
      721 atattgacgt gttcttcccg gagttcgccc acgccacgcc aagggtgcag ttagacttgc
      781 atccaacagg aagcgttaac ggcagcaact acgcgcaaga tctgaccatg ttggacatgt
      841 gcctgtacga tggttttaac ggtaatgcca tcagttatga aatcatgctc aaagatgaag
      901 ggcgaccagc tgcagggcgc agagacggtg acttctctat ctatcgtcag ggaggaacct
      961 ctaccgacga gggagaacgc attgattacc gggtcaaaat gtacaacccg gaaaccggtg
     1021 ggcaaattga tgtgcgcaat aatgaaaata tggtctggaa cagcattaac ctgaaaagtg
     1081 tgcgtccggt ggtactgccc ggtattcgct atgccgtgat gtgtgtgccg acacccttga
     1141 ctctggcagt cgataaattc agcgtgatgg ataaacaggc cgggtactac atgggcaaat
     1201 tgtcagtaat ctttacgcct tccttgccaa ccatcaatta accctgcaaa gcggacaaac
     1261 gcttttttct atataaacga cgaagccgcc tgataaggcg gcttcgtcgt tataacttac
     1321 gttaaacgtt aatgttgcgg tgcgggatcg ttatgtgatt cctgcgctac ctcaatcgcc
     1381 ggtttgttct gcaacacggt ccagataacc agcgcaccta acaggtcgaa cactgccagt
     1441 actgcgaaca gcgggctgaa gccgatggtg tcagccagtg caccgacaac cagcgaaaac
     1501 agcgtacttg ccagccatgc ggacatcccg gttaaaccgt tcgccgtcgc cacttcgtta
     1561 cgaccgaaca cgtcagaaga gagcgtaatc agcgcgccag acagtgcctg atgagcaaaa
     1621 ccaccgatac acagcagcat aattgcgaca tacgggttgg tgaacaggcc gatcataccc
     1681 gggccaatca tcagcactgc acccagcgtt acgaccatct tacgggaaac gatcaggttc
     1741 acaccaaacc aacgttggaa cagcggcggc aggtaaccac cgaggataca accgaggtca
     1801 gcaaacagca tcggcatcca ggcgaacatc gcgatctctt tcaggttaaa gccgtaaact
     1861 ttaaacatga acagcgggat ccacgcgtta aaagtacccc aggctggttc tgccaggaaa
     1921 cgcggcagcg cgatacccca gaactgacgg ttacgcagga tctgaccaac ggacattttc
     1981 ttcgccgtgc tcacctggtg ctgggcttcc tgaccattaa taatatagtc gcgttcttca
     2041 tcggtcagat gcttctggtc gcgcggatgt ttatagaaaa tcagccatgc catcgcccag
     2101 ataaagctca atgcaccgga gatgataaat gccatctgcc agctgtgcat tacgattgcc
     2161 cataccacca gcggcggcgc gatcatcgca ccaatcgaag aacctacgtt aaagtaacct
     2221 accgcgatgg aacgctcttt cgccgggaac cattcggagc tggctttcag acccgccggg
     2281 atcatcgctg cttccgcggc accgactgca ccacgagcaa tcgccaggcc acccctgcta
     2341 ccagccagcg cggttgcacc acagaatacg gcccacagta cagcaaacat tgcataaccg
     2401 attttcgtac ccagcacatc cagtacatag cccgctaccg gttgcatgac cgtataagca
     2461 gcagaatagg ctgcgatgat ataggaatac tgttgggtgg agatgtttaa ctcttccatc
     2521 agagttggct cagctgccgc cacagtgtta cgcgtcaggt aaccaagcac ggtgccaagc
     2581 gtcaccagtg cgatcatata ccaacgtaac cctttaattt tacgcatgta aaacctcatc
     2641 gttttgttat atccgcagga agcgcggcca tcatcccgcc agaggctgaa gatgttagtt
     2701 acgaccgggt aaccgaaaaa aaaccggcac gccccgaacg ttgccatgaa agtttcgtgc
     2761 taattcggct tccgtaccgg ttaacccgat tcatctaaca aatgaatgaa tcggcaattt
     2821 gcattccgtc gacttatgat ttgcgacggc agaaagataa cttgtcatac aactttaaaa
     2881 ggtgagagcc aacataaatg tgcgaatatt tgtagggaca ttacctgacg acagcgaggc
     2941 cagtactggc gcggcctgca gcgagattta ccactttgag agtaattttt ttaactacgt
     3001 ttattgatct aactcacgaa aatatcttcg gactctggaa attggtgtga taactttgtc
     3061 agcatcgcac cataagcaag ctagctcact cgttgagagg aagacgaaaa tgactccgtt
     3121 tatgactgaa gatttcctgt tagataccga atttgcccgc cgtctgtatc acgactacgc
     3181 aaaagaccag ccgattttcg attaccattg ccatttgccg ccgcagcaga ttgcggaaga
     3241 ctatcgtttt aaaaacctgt atgacatctg gctgaaaggc gatcactaca aatggcgcgc
     3301 tatgcgtacc aacggtgtgg ccgagcgtct gtgtaccggt gatgcgtctg accgtgaaaa
     3361 atttgacgcc tgggcggcga ctgttccgca cactatcggc aacccgttat accactggac
     3421 gcacctcgaa ctgcgtcgtc cgtttggtat cactggcaaa ttgctttctc cgtcaactgc
     3481 cgatgaaatc tggaacgaat gtaacgaact gctggcgcag gataacttct ccgcgcgcgg
     3541 catcatgcag cagatgaacg tgaaaatggt cggcaccacc gatgacccga tcgattctct
     3601 ggagcatcac gcagagatcg ccaaagacgg ctctttcacc atcaaagtgc tgccgagctg
     3661 gcgtccggac aaagccttca acatcgaaca ggcgaccttt aacgactaca tggcgaagct
     3721 gggcgaagtt tccgataccg acattcgccg ctttgctgac ctgcaaactg gcttgaccaa
     3781 acgtctggat cacttcgccg ctcacggctg taaagtgtct gaccatgcgc tagacgtggt
     3841 gatgtttgct gaagcgaacg aagcggaact ggacagcatt ctggcgcgcc gtctggctgg
     3901 cgaaaccctg agcgagcacg aagtggcaca gttcaaaact gcggtactgg tgttccttgg
     3961 tgccgaatat gcacgtcgcg gctgggtaca gcagtaccac attggcgcgc tgcgtaataa
     4021 caacctgcgt cagttcaaac tgctggggcc ggatgtaggc tttgactcca tcaacgaccg
     4081 tccgatggca gaagagttgt ctaagctgct gagcaagcag aacgaagaaa acctgctgcc
     4141 gaaaaccatt ctgtactgcc tgaacccgcg cgataacgaa gtgctgggca ccatgatcgg
     4201 taacttccag ggcgaaggta tgccgggcaa aatgcagttc ggttccggct ggtggtttaa
     4261 cgatcagaaa gacggtatgg aacgtcagat gacccaactg gcgcagctcg gtttgctgag
     4321 ccgctttgtc ggtatgctga ctgacagccg tagcttcctg tcatacaccc gtcacgaata
     4381 cttccgccgc attctgtgcc agatgatcgg tcgctgggtg gaagcgggcg aagcaccggc
     4441 ggacatcaac ctgctgggcg agatggtgaa aaatatttgc tttaacaatg cgcgtgacta
     4501 cttcgccatt gaactgaact aaggtctggg gttgatatgc aatacatcaa gatccatgcg
     4561 ctggataacg tcgcggtcgc tttagcggat ttggctgaag gcacagaagt cagtgtcgat
     4621 aaccagactg ttacgctgcg ccaggatgtt gctcgtggac ataaatttgc gttaacggat
     4681 atcgcaaaag gggccaatgt catcaaatat ggcctgccga ttggttatgc attggcggat
     4741 attgcggcgg gggaacacgt ccacgcccac aatacgcgca cgaatctgag cgatctggat
     4801 cagtatcgct atcaacctga ttttcaggat ctgcctgcgc aagcggcaga tcgtgaagtg
     4861 cagatctatc gtcgcgctaa cggcgatgtc ggggtgcgta acgagctgtg gatcctgcca
     4921 accgtgggct gtgtcaacgg catcgcgcgg cagatccaga accgttttct gaaagagacc
     4981 aacaacgctg aaggtaccga cggcgtgttc ctcttcagcc acacctacgg ctgctcacag
     5041 ctgggcgacg atcacattaa tacccgcacc atgctgcaaa acatggtgcg ccacccgaac
     5101 gcaggcgcag tgctggtgat tggtctgggc tgtgaaaaca accaggttgc cgcattccgt
     5161 gaaacgctgg gcgatatcga tcctgaacgc gttcatttca tgatctgcca acagcaggat
     5221 gatgagatcg aagccgggat cgagcatttg catcagctgt ataacgtgat gcgcaacgat
     5281 aaacgcgagc caggcaaact cagcgaactg aagtttggtc tggagtgcgg tggttctgac
     5341 ggtctttctg gtattactgc taacccgatg ctggggcgtt tctctgacta cgtgattgct
     5401 aacggcggta ctaccgtact gaccgaagtg ccggagatgt ttggcgcaga gcagttgctg
     5461 atggaccatt gccgcgacga agcaacgttt gaaaaactgg tcaccatggt caacgacttt
     5521 aaacagtact ttattgccca tgatcagccg atctacgaaa acccatcacc ggggaacaaa
     5581 gcgggcggta tcaccacgct ggaagacaaa tcacttggct gtacccagaa agcgggttcc
     5641 agtgtcgtgg ttgacgtgct gcgttacggc gagcgtctga aaacgccagg gctgaacttg
     5701 ttaagtgcgc cgggtaacga tgccgtagcg accagcgccc tggcgggtgc gggctgccat
     5761 atggtgctgt tcagtactgg tcgcggcacg ccatacggtg gatttgtgcc gacggtgaaa
     5821 atcgccacca acagtgaact ggcggcgaag aaaaaacact ggctcgactt tgacgcgggt
     5881 cagctgatcc acggtaaagc gatgccgcag ttgctggaag aatttatcga caccatcgtt
     5941 gagtttgcca acggtaaaca aacctgcaac gagcgtaacg acttccgcga actggcgatc
     6001 ttcaaaagcg gcgtaacgct ataaagtcga aatgagttgt taataaaaaa cggcgtttca
     6061 taatgtgaag cgccgtttgc ttttccatac ctgataagga tttatcatga ccgcgtattg
     6121 gctggcccag ggcgtgggtt tcatcgcctt tctgattggt atcacaacat ttttcaatcg
     6181 tgacgaacgt cgcttcaaaa agcagctttc ggtctatagc gccgttattg gcgtacattt
     6241 ttttcttctg ggcacctatc ccgctggtgc cagtgccatc cttaatgcca ttcgtacatt
     6301 gattacctta cgcacgcgca gcttatgggt aatggcgatt tttattgtgc tgactggcgg
     6361 aattggcctc gcgaagttcc atcatcctgt cgaactattg ccggttatcg gtacgattgt
     6421 cagtaccagg gcgctgttcc gctgtaaagg gctcaccatg cgctgcgtga tgtggttttc
     6481 aacgtgttgc tgggtgattc acaacttctg ggcggggtcg ataggcggca caatgattga
     6541 gggtagtttt ctgcttatga atggcttgaa tatcattcgt ttctggcgga tgcagaaaag
     6601 gggaattgat ccgtttaaag tagagaaaac ccctcccgcc gtagacgaaa ggggttaaac
     6661 aattaattac gcagggcgct atttgccaga cgatcgtctt ccgcctggca agctgccgca
     6721 gtgaacagca cgtcagttga agagttcagc gcggtttcgc aagagtcctg caatacgccg
     6781 atgataaagc cgacggcaac cacctgcatg gcgatatcgt tcgaaatacc gaacatatta
     6841 caggccagcg ggatcagcag cagagaaccc cccgccacgc cggatgcgcc acaggcacac
     6901 agagaagcca ccacgctcaa cagcagcgcc gtgggcagat cgaccgggat acccagcgta
     6961 ttaaccgcag ccagcgtcaa cacggtaatg gtgattgctg cgcccgccat attgatggtg
     7021 gcacccagcg gaatagaaac ggaataggta tcgcgatcca gattcagctt ttcacacagt
     7081 gccatattca ccggaatgtt cgccgcagag ctgcgggtga agaaggcata cacgccgctt
     7141 tcgcgcaggc acagcagcac cagcgggaac gggttacgac gaattttcca ccacaccagc
     7201 aatgggttaa ccaccagcgc caccagtaac atacagccaa ccagcacgac cagcagttgc
     7261 gcgtagcccc acagtgtgga gaaaccggtg gttgccaggg tagaagaaac cagaccaaaa
     7321 ataccaatcg gtgcgaagcg aatgaccagt ttcaccataa aggtgacggc attcgacaga
     7381 tcgttgacca ggtttttggt ggtctcgtta ccgtgacgca gtgcgaaacc gaggccaatt
     7441 gcccacacca ggatcccgat gtagttacct ttcagcagcg cgtcgatggg gttggaaacc
     7501 atgctcatta ccagcccgcg catcacttct acaatgcctg acggtggcga aatatcaccc
     7561 gcgctactgg ataagtgcag ggtagaaggg aaggcgaagc tgaaaacgac tgcggccaga
     7621 gcagcagaga aggtacccag cagatagagg aacaaaatag ggcggatatt ggttttctgc
     7681 ccgtgctggt ggttagcaat agatgccatc accagcatca acaccaggat gggggcaacg
     7741 gctttcagtg cgccgacgaa caaagtacct aacagaccaa cagcttccgc cgcgggtttt
     7801 gagatccatg ccagaagaat ccccagaaca aggccgacca ggatttgttt taccaggctg
     7861 ccatgagcca gacgccggaa tagccccggt gaacgttgcg tagtcatttt tcgatccttt
     7921 cattgtgttg tcgcacatcc ctggtgcgtt ctgtcgacgc atctttcagg atgtaacaaa
     7981 gtgtttgcaa ggtcgagtat aaggaaagtt acagcttcgg gaagcgaaaa atgctggatt
     8041 ttaaagagag gtcatatttt gcaacttaat tgttacattt gtttgacata aacagaggga
     8101 aggactggct actaaggctg attagataac atatgggcaa aactatttgg aatatgagaa
     8161 cggttgcgct cctttaatgt gctatgccat ataaagtcac tggcgcaggg agcgcgcagg
     8221 gggcggccaa tcgccgccgc cccctgcccc cccaggctct ggcgaacaaa atcgccgctg
     8281 cgcgattccc tcagcttatc ccttgcggct accgggtcgg gcgcaaggga acgtccctgt
     8341 aagatgcgcc ctcgccgcgc atccatgcgc gtcgccccgg cctccaggga acgcttcggc
     8401 gattttgacg ccaccaacag ccgtgcggtc tttttgtaaa gagctacaag ccaattacat
     8461 aattaatagc tcacctttgt ctggaatgag ttatctctag gaatggctta atatacagcg
     8521 aatcattctc cccgctgctt atcatgccga taattcaccc aggcgttgat aataaacgtc
     8581 atcaccagaa tgccaaacac cacgcccagc gagacggcga ttggaatatg gtagaagtcg
     8641 acaatcagca tcttgatacc gataaacacc aggatcaccg ccaggccata tttgagcatc
     8701 gagaaacgct ctgctacgcc cgccagcagg aaatacatcg cacgcaggcc gaggatcgca
     8761 aacaggtttg aggtcagcac aatgaacggg tcagtggtca cggcgaagat agccggaatg
     8821 ctatccacgg cgaaaatcac gtcgctcaat tccaccagaa tcagtaccag catcagcggt
     8881 gtggcgtaca gcaatccatt cttacgcaca aagaaatgct cgttgtcgat ggtgtcggtc
     8941 atgcgcaaat gaccgcgtag ccagcgcacc agcggcttgt tgccaatgcc tgattcatct
     9001 tcatgggcga gcgccatctt cacgccggta aacagcagga aggcaccgaa gatatacagg
     9061 atccagtcga actgcgaaat tagccagctg ccagtgaaga tcatgatggt acgcagaaca
     9121 atcgccccga gcacgccata caccagcacg cggcgttgta atgccgccgg aacagagaaa
     9181 tagctgaaca acatcagcca gacaaagacg ttatcgaccg ccagcgattt ctcaatcaga
     9241 taacccgtga gaaaggccag tgcctgtgga tcggcaacgg cgcgaccttc ggtttgcacc
     9301 agataccacc agaaagcggc gttaaacagt aacgacagcg tcacccaaac cagcgaccag
     9361 gccgcagcct gtttcatggt catggcatgt gccccacgac gcccctgcaa caacaggtcg
     9421 atagccagca taatggcgac aacaacagcg aatccgcccc atagcaacgg cgtgccgaca
     9481 gtattcatag aagttcctta cacataaaaa aaacggccaa cgtcggaaga cgtcagccgc
     9541 tgctttttat gcatagacct cgccttccgg caaggtctca cttacaacaa aaaaggaata
     9601 cgtctgcgta ttcctttcgg gttgcccggt gaccggatgt ggtttttcac acatcgtaat
     9661 gacgatcgac cggcaatgaa gttactcccc tttgcaggta acaaagtatg acagaccatt
     9721 cagccagtca atggtctgtt acataccttt tacactgttt tactttggca attatagttt
     9781 tacgctatct gccggaaaaa tcaccccagt ctggcggcgg atctcagtca gcagtttggc
     9841 ggtgatgcga ctgaccgcca gccctggatg atccaccaga tgctcatcca ccagggtagc
     9901 aaacagctct gcttcgtaga gcatggtatt aatatgctgc ggctgggtga gatcctgcat
     9961 ctggctgcca cgcggcacga agcacacttt ctggcattca gacagttttt caatcaccag
    10021 cgatcccgct tcgccctgaa tctcgctttc caggacagaa tcactgacct ttgagtgcag
    10081 caacgtaacg ctgaaatcac cgtaatccat caccaccacg ccgtgggcat ctacgccgct
    10141 tgccaacaaa ctggcggttg cctgcacgct tttcggttca ccgaataatg ccaccgccga
    10201 cgccaggcag taaaagccga tatccataat tgaaccgtta gagaatgccg gattaaaggt
    10261 gttgggattc tcaccatcca ggtaacgttg ataccgcgag gaatactggc aatagttgaa
    10321 aaagacttta cgcaatttgc cgactttcgg cagcgcctgg cgcagcaaat gaaagttcgg
    10381 caggctggcg gttttaaatg cctcaaacag caccacctga ttttcccgcg cacaggcaat
    10441 ggcggcatcc acttccgcca gattcgacgc cagtggtttc tcgcaaatca catgaatttt
    10501 atggctaagg aaaagttgtg tctgggaaaa gtgcagggca ttcgggctgg caatatacac
    10561 cgcgtcaatg gcatcgcttt ccgccatcgc ttccagcgag gtaaacagat gctcgacaga
    10621 aaaatcattg gcgaagtgct gggcctgttc aaggctgcgg gaatatacgg cggttaactt
    10681 gtatttaccg ctctcatggg cggcctcgac gaactggcga gtgatccagt tcgtaccaat
    10741 cacagcgaaa cgtatcataa cgcgtggata ctccataaag ggattctgtc gtcaatgtag
    10801 cacgcctttt tcatcttcga cgtgcgcaga tacgcattat tcttttgccg gacagccatg
    10861 ctcactaaac ggcccaatca tgaccgatgg cccgagatat ttcggctggc gatggaggat
    10921 tttggcgtca atcacggcgc tgacacgagc gagtttctcc cgcagttgag tataaaaacc
    10981 gtgcttcata ttgaggtcag gcgcgttaaa accgatagcg tcgatgctgt actgttttgc
    11041 cagccagatg gcgcgttggt tatgaaattc ttgcgagata atggtgatat ggttttcacc
    11101 aaaaaccttt ttggcacgca ctaccgaatc cagcgttgag aatccggcat agtcgcagaa
    11161 gatcactttc gccggtacgc ctttagcgat caaagccttc tgcatacctg atgcttcatc
    11221 gtaattttta cgtccgttat cgccacttac cagtagccat ttcacttttc cggcgtggta
    11281 caacgctgct gcggtatcaa tacgtcgggt aaagtagcga ttacccggcc tggcccccag
    11341 caataagccc acgttacgcg ccggaactgc gttgacatcg ctccaggtca gctgcttgct
    11401 ggcgttgacc attactcgat cggcgataaa aatggtcgct cctgccacaa gtaacagtaa
    11461 gcaggcaatc tttagagtcc ggcgagaaaa acaaatacgg agaagaaggc ggggctgcat
    11521 ggtcgttatc cttaacgaaa ggggggaggt cgattttagg cgctaaagaa agaaaagata
    11581 acgcctgaca tcattttcag attttgtcct gcccaagcga caactgcgtt agccacagcc
    11641 gggtgtcgaa ctccagctgg tggtactgcg gctccatatg gcagcacaac tggtaaaacg
    11701 ctttgttatg ctctttctcc ttcaggtgcg ccagttcgtg caccacgatc atacgtaaaa
    11761 acggttccgg cgcgttgcga aacacagtag cgacgcggat ctctgctttt gctttcagct
    11821 tgccgccctg cacacgagaa acagcggtat gtaacccgag cgcgtttttt agcacatgga
    11881 tcttattgtc atacatcact ttattgatcg gcggggcatt gcgcagaaac tgatttttta
    11941 gatcctgagt atattgccag agggctttat cggtggcgta gtcgtgtgtt cccggatagc
    12001 gttttgccag cacatcgccc agacgctgtt cgttaatcag cgttcgcacc tgggaaagta
    12061 gctgctcggg ataaccctga agataagtaa gattgctcat aaccgcccac gaaaaagaga
    12121 aaaagggtat actcacgcac ccttttcagg ggcaacgtcg aaattttatc attcaggagg
    12181 gccgatgagc cacttagaca acggtttccg ttcactgaca ctacaacgtt ttccggcgac
    12241 ggatgacgtt aacccgctac aggcgtggga agcggcggat gaatatttgc tgcaacagtt
    12301 ggacgacaca gaaatccgcg gcccggtgtt gatcctgaat gatgcctttg gtgcgttaag
    12361 ctgcgcgctg gcagaacata agccgtacag cattggcgac tcatacatca gtgaactggc
    12421 gacgcgcgag aatttacgcc tcaacgggat tgatgagtcg agcgtgaagt ttctcgacag
    12481 caccgccgac tacccgcaac agccgggtgt ggtgctgatc aaagtgccga aaacactggc
    12541 attgctggaa caacaactgc gtgcgctgcg caaagtggtc acgtcggata cacgtattat
    12601 tgccggtgcc aaagcccgtg acattcacac ttccacgctg gaactgttcg aaaaagtgct
    12661 cggcccgacc accaccacgc tggcatggaa aaaagcgcgc ctgattaatt gcacgttcaa
    12721 tgaaccgccg ctggccgatg cgccgcagac cgttagctgg aagctggaag gtactgactg
    12781 gactatccat aaccatgcga atgtcttctc ccgcaccggg cttgatatcg gcgcgcgctt
    12841 ctttatgcaa catctgccag agaatctcga aggggagatt gtcgatctcg gttgcggtaa
    12901 tggcgttatt ggtctgacgc tgcttgataa aaacccgcag gcgaaagtgg tgtttgtcga
    12961 tgaatcgccg atggcggttg cttccagccg tttgaacgtt gaaaccaaca tgccagaggc
    13021 gttggatcgc agcgagttta tgatcaacaa cgcgctctcc ggcgtggagc ctttccgctt
    13081 taatgctgtg ctctgcaacc cgccgtttca ccaacaacat gcgctgaccg ataacgtcgc
    13141 ctgggagatg ttccaccatg cccgccgctg cctgaaaatc aacagcgagc tgtatattgt
    13201 tgccaaccgt cacttggatt acttccataa actgaagaag attttcggca actgcaccac
    13261 catcgccacg aataataaat ttgtggtgct gaaagcagtg aagctggggc gtcgtcggta
    13321 agattgggag ttacctgccg gatgcggcgt taacgcctta tccggcctac gttcagcacg
    13381 ttactcccag gccggataag acgcggcaag cgtcgcatcc ggcaatgtct gcccagttct
    13441 ggaatcgcgc ttccataaaa caaaaaatcc ctctcaccat cctctacatt ctcttgttta
    13501 gcgtttttct acgtttattc ttccgtcaca cagataaatt catacgttgc caatctgtca
    13561 acggatgtta tcatattgcc aatttgtcaa cggacgtgat gaagaatgca cctgataact
    13621 caaaaagcat tgaaagatgc tgcggaaaaa tacccgcaac ataaaacgga gttggtggct
    13681 ctggggaaca cgattgctaa gggatatttc aaaaaacctg agtcattaaa agcagtattc
    13741 ccatctctgg ataacttcaa atatctggat aagcattatg ttttcaatgt tgggggcaat
    13801 gaattacgtg ttgtagcaat ggtctttttt gaatcgcaaa agtgctacat acgtgaagtt
    13861 atgacgcata aagaatacga tttctttacc gctgttcatc gtactaaggg gaaaaaatga
    13921 ttgcgattgc cgacatcttg caagcaggag aaaagctaac tgcggtggcc ccttttctgg
    13981 cgggtattca gaacgaggaa caatacaccc aggcgctgga actggtagat catctgctgc
    14041 tcaacgatcc tgaaaacccc ttgctggatc tggtgtgtgc caaaataacc gcgtgggaag
    14101 aatcagcgcc cgaatttgcg gaatttaatg ccatggctca agccatgcct ggcggtatag
    14161 ccgtgattcg tacccttatg gatcaatatg gtttaaccct tgccgatctg ccggaaattg
    14221 gcagtaaatc tatggtgtca cgcgttttga gcgggaagag gaaattaacg ctggaacacg
    14281 ctaaaaaatt ggcaacgcga ttcggcattt ctcccgcctt gtttattgat taacgcgacg
    14341 tgccggatgc gttgcatccg gcgcttcaaa taacgattta aatctccagc gccagccgtg
    14401 ttccctgggc aattgcccgt cgtgcgtcca gctccatagc cacatcgcag ccgccaatta
    14461 aatgcacagt tttcccgcta tcaatcagcg gttgcgccag cgcgcggttt ggctcttgcc
    14521 ctgcgcagat caccacattg tccacagcta atacctgcgt ttcgccgttg atcaccacat
    14581 gcagcccgtc atcgtcaatc ttctgataac ttacgcctgg gatcattttc acaccccgcg
    14641 agagcagggt ggtgcgatgg atccagccgg tggttttgcc taacccctgt cccggtttgc
    14701 tggctttgcg ctggagcatc acaatttgcc gtgggctacg cgggatctgc attccctgcg
    14761 ggcttaagcc accagcctgt tgtaggctgc tgtcgatccc ccactcatta cagaacctgg
    14821 cgatattctg gctggtggat tcgcccggct gacttaaata catcgccgta tcaaaaccaa
    14881 tcccgccaca accgatgatg gcaaccttgt tgcctaccgg cgctttgtcg cgcagtacat
    14941 cgagataact caataccttc ggatgatcga tcccgtcgat aggcggaacg cgcggcacga
    15001 tcccactggc gaggatcgtt tcatcgaacg cctgtaactg atccgccgtc acggtgtgat
    15061 tgagtttcag cgtcacgccc gtcacttcga tcatccggtg gtaatagcgc agcgtttcgt
    15121 aaaactcctc tttgccgggg atctgtttgg cgatattaaa ctgcccgccg atctcgctgt
    15181 gggcatcaaa caatgttacc tgatgcccac gcgccgccgc gttaatggca aacgccagcc
    15241 cagcaggtcc cgcaccgacc accgccagat tttttttctg cacggcagga aggattggca
    15301 ttttggtttc gtggcaggcg cgaggattca ccaggcacga ggtgactttg ccaacgaaga
    15361 tctgatcgag gcaggcctga ttgcagccaa tgcaggtgtt gatctcatcg gctcgccccg
    15421 attgcgcttt tgacagcagt tccgcatcag caagaaacgg tcgtgccatc gataccatat
    15481 cggcatcgcc gcgcgagaga atatcgtcgg caacctgcgg atcgttaatc cggttggtgg
    15541 ttaccagcgg cagcgagacg tggcctttca gtttgcgcgt gacccagcta aatgcgccgc
    15601 gcggcacggg cgtggcaatg gtcggaatac gtgcttcatg ccagccaatg ccggtgttga
    15661 taatggtcgc gcccgccgct tcaatggcct gcgccagctc taccgtttcg gcaaaagtcc
    15721 cgccgtcttc gaccaggtcg agcatcgaca gtcggtagat aataatgaag tcgttgccga
    15781 cgcgttcgcg caccgcacgc actacttcta cggcaaatcg catccggttg cggtaatcgc
    15841 cgccccactg gtcactacgc tgattggtgt gcagcgtcag aaattcgttg atcaaatacc
    15901 cttcggaccc cattacctct acaccgtcgt atcctgcctc ccgtgccagt tgcgcgcagt
    15961 gggcgaaatc gtcgatcagt tgcaggatct cttcatgggt gagttcgtga ggaacgaaac
    16021 ggttgatggg ggcctgcaat gcggagggag cgaccagatg cggttggtag ctgtagcgcc
    16081 cggtatgcaa aatttgcagg gctattttgc cgccttcctg atgtaccgct tcggtaatgg
    16141 tgcgatggtg tgggatctgg ctggcgtcgt tgagcattgc gccaccttcc atgccaacgc
    16201 ctgttaaatc tggtgcaatg ccgccgctga caatcagcgc cacgccgtga cgggcgcgtt
    16261 cggcataaaa cgctgccagc cgctcggcac cgtccgggta ttcctccagc ccggtgtgca
    16321 ttgagcccat caacacgcgg ttttttaacg tggtaaaacc taaatccagc ggggcgaaca
    16381 gcgacgggta gctcataaaa ttgtccagta tgtaaaataa ttgttatgtg gtcggatgag
    16441 ttctaattta gccgtcgccg gagaaaaggg aaaaggggag tgcggggttt gtgatgggat
    16501 tcaaaaagaa tacgcccggt ggtaacgccg gatgcgacgc ttgccgtgtt ttatccggcc
    16561 tgggggattg cacatgtagg gcggataagg cgttcacgcc gcatccgcca gtggcgcggt
    16621 gcagatgccg gatgcgacgc ttgtcgcgtc ttatccgacc tacgggaatg cacatgtagg
    16681 gcggataagg cgttcacgcc gcatccgcca gtggcgcggt gcagttgccg gatgcaacgc
    16741 ttgccgcgtt ttatccggcc aggaggattg cacatgtagg gcggataagg cgtttacgcc
    16801 gcatccgcca gcagttgcaa attattgctt acggaaaaaa tcgttataca acatatacaa
    16861 atgcgcggca ctccaggaga aatttggtgc gccttgctgc gcgccagtca gcgggttgta
    16921 attctcctga attgggccat cggcggttaa tcctttggcg tgccggaaga acgtatccgc
    16981 cagcttcagg gcatcatcac gataaccgta acgctccatc cctttcagag caaaccagaa
    17041 ctgatccacc catacgcgcc cgcgccagta gatatcagcg ccaaaagccg gattggttaa
    17101 cgccgccgtt cccagcggga caaaggtgtt gaactcttta ggatcgagca tcaccttcac
    17161 caccgcgtcg gcattggcct gcgttgccgc accgttaaac agcggcgacc agccttccgg
    17221 ccctttaccg cgctcaacaa tcggtttgcc cgcgcagccg ttcgccagtg gtttatcttc
    17281 aatacgtacg tcatagtaga actgggtagt cgggtcgaac atacaggtgt tgatgtagtc
    17341 cgcgagctgc tgtgccaact ggcgatagcg tttggcctct tctggcttac cgaggatggt
    17401 tgccatctcc gccagataat ggttatcgct gtacatatag ctggcctgat ccaccgactc
    17461 ctgcaatagc gagtagccca gcaacgttcc gtcctgactg cggttttcgg cgaatttcac
    17521 cgtccagtcg ctacgtttgc caccattagc gacatattta tccaactgtt ctttgtcgat
    17581 aaaaccaaag acggcggcat catcacgccc cgattcccac gacgcagcga cctgtgccgg
    17641 aatttccaga ctgtcgtact ggcctttctc caccacgcgg gcgtagttgt tcagcccaga
    17701 ctgcgtctct tctttgttgc ctttcttcac cgcaaacagc atctcgccgc tctcagtgtt
    17761 gtgggctttg tcgcgggtcg cgccatattc cggcacgccg ttgccgttgt gatcgcggtt
    17821 acgtaaccac cagtcgtgat aggccaccag tttcgggtac atctctgcca accaggcttt
    17881 atcctgggtg acgttgtaca cttctatcac cgaccaggcg gcaaggctgg gtttggtatt
    17941 acgttcgttc cagttgccgc catcgccacc acgctcgggg ctaaggttcc acgctatcag
    18001 gtcggggaca aagcccacat cctgcggacg cacgcggtcg ccaggctgga tctgccagga
    18061 gaagaccgcg cggatattct ctttggcgat gtccggattg aaatgcgcca tcgcaaacgc
    18121 ctgcttctag gtatcccacg gccaggtctg attgccggag aaccagcgcc cggtcaccga
    18181 cggtgtaacg gtgttaaatt tcaccgcacc gcccggtgag cgccagttac cgttgagcgt
    18241 ttcgatcgct ttcaccgcga cgcgcgtctg ttccggcgtc gcatccggat tggttaaccc
    18301 tttcttcagg tattcttccc agcgttgctg cgaggcggtg agataaaacg ccggacgcgc
    18361 cagaatatcg cggatctgca tttgctcttt gctaacttcc tgagcggtca gcagatggga
    18421 ataggtggtg tagagcgtgg tcgaaccgtt gatatgcgcc ttactggtaa agcgattacc
    18481 gttgatttca gtctgcaccg gcagggattt atgcacctga tattccgatt cgccggaggt
    18541 cagcagatcc caggtggcgc gcactttgcc aaaggtgact ttcaggccat cacgggtggc
    18601 gctgattttg cgctgatagt cagggtattc gccagcaatg gttttatcgg aaagcggttt
    18661 cccttctttc gcttccagtt tttccagcag ttcgccgtcc cacaccagat ccagcggttt
    18721 attgctggtg attttggttt ccagtagtga cgtgcgcggc gtggcgaagc gcagagtcat
    18781 ttcgacttgc acatcttttg ctgtcagttt ttgcaccagc gcaccgggaa tactgtatgc
    18841 ctccagcgta aagtcgactt tcttgccgtc ctgccagacg gtcaggcggt cgaaattgct
    18901 ggccataaag ttgatgtact cttccgtcag cagcgcaacg cccggaaagc cgcccatggt
    18961 gttagggccg tctggcaaca gatgaccatg ccaggctccg agatcgaaaa acggattaaa
    19021 acgctggtga tcgtcgtaat cgtaatcctt catgtactgc ggcgcgccag tacggttaat
    19081 cacgttttta taattgtcgg cgttagcggc atgggcggaa aaacttatca gcagagcgca
    19141 ggttactggc gttaaaatag tttttatttt catgaaatta cagtccttat taccagtaga
    19201 aatattgcat caggaagatt tggtcgctgg gatcgtgaga ggcatttttc atgtagaagc
    19261 ggctatcaaa agccgtggcg aaacgtccgt cgccgtattc gtaccagata ccaaactgca
    19321 tgaaagaggt ggtttcatcg tcagcgtggt cagggcgatg tttggcgtag gtgtaagcgg
    19381 tggagagata aacgcccttt aacgcttcat acatggcgct caccatcatc ccactttcac
    19441 ttcccggtac gtccagcccg tcggcgcgtc cggtatggtg ccaggcgcga gcggcaaagt
    19501 taggagttag caggcccgtg agatagagct gtcctgtgcc gtcggtgatt tccagaccgt
    19561 tcatccaggt gatgccttcg gcaaggtcat actggatgta accgttcatc attgccggat
    19621 aggtgtattt gtcgtcatag cgatcgtatt tgccaaaatg tagccaggct ttgctttcat
    19681 catgatgtcc ggcaggagtc gcggtgacgc tataacgaaa gttgccgctt aagttctgta
    19741 ccttcagcgc agtcataatg tcgcgggtat tgggaatgac gtagcccaga tcgggggtga
    19801 aatcgcccca ccattgcagg tcatccagcg aggaatcctg acgcagactg agcatgattt
    19861 cagtgccatc attggtacga taaccgccat agaaacggtt aattccgccc tcgaaaccac
    19921 cccagctatg gtctggcacc caggcattgc cgtcgtggtc ggcctgcacg gtccagcctt
    19981 cgccgtaaat caggccgaac caggagccgt acttcatctc caggccacct tcaatatagg
    20041 taccgtcgct gtatttatgt ttattctcac cctctaaatc catatatcca ccaaccccta
    20101 attcgccgta aaaacgaaat gaaggagaag atgtcgaggt aattgcgggt gtttttgtgt
    20161 cgtcatgttc tgccggacgt gcttcttctc ctgccgcaga aaaggcgtag caaaacggca
    20221 gagcaagtaa tgctctgcat ggtgcagtga ttaatttcat tgtgttaatc catgagctaa
    20281 agaaaaagta cagcctttta tcgttgtaat tataaaaata taaaggcaga aactattttc
    20341 cctctcctca tccaggaaga gggaaaatgc ctgctcattt tttattattc tgcttaatca
    20401 acattgctgg ctggcgtcgc ttcaatatgg cgctcttcag ccgttaatcc ctttatatat
    20461 ttactgtatt tccaccacgc aaagccaagg aagataacaa taccgccgac gttataaaaa
    20521 atgatggtca gaatattcgc gccagtcggg aatgtcgaag cgacaaaccc tacggcaaat
    20581 atcgcaatct gcattgaaac aacgataata ccggtgcggc gggagctcat acggaaatcg
    20641 cgtggcaggt gatctaattt ggcgcgtaaa ttcaggtaag ccagcatgat gaataacggc
    20701 ggaagcatgg acgctgcggc ggtcatatta ataatagtat tcatcagatc ctgcacggta
    20761 ttggaaccga gcatcgggat aatcatcagc gggatgacga tcaggaactg gatccacgct
    20821 gcgcgcgccg gaacgccgtt ttcgttcagt tcgacggttt tcttaccaaa gatgccttcc
    20881 gggatttcgg agaagaaaat tttcaccggc gttgcggtcc acatcagcag ggaaccgaac
    20941 atcgcggtaa aggacaccag accgacaaag cgattcatca acgcttccgg tagaccaaaa
    21001 tacgccgcca tgccatggaa tacctgcacc gatccgccgg taaatttcaa ctctttgctg
    21061 ctgacgaaga cgttaatcag caccgaggag acggaataca gtacgccgat aaaaatcccg
    21121 gcgaggatga tcactttaac gaacgatttc gaaccgcctt tgacgtcgtt aacgtacaca
    21181 gcgacggact ccgcgccacc tgcggccata aagatccagg tggtaacgcc gaggaacgcc
    21241 cagttgaagt tcgggatcat cgcgtcaacg gtgatggggt cagcaggctg tacgccgcca
    21301 accagcgccg tacctgccag taaaatgtag gagagcgtta acagcagcat cagcgttgaa
    21361 gtgacggagg taattggccc caacattttc gccccgttgg tggaaaccta ggtggagaag
    21421 gcgaacagca ccatactgat aatggtggtg gcaaccggcg tcataatata ttcgtatccg
    21481 aggaaggcat acgaagcata agcaataacg cgcggcaaca gtgaggtgaa aaagaacagg
    21541 tttacgaacc agtaggtata ggcagtaata aatgcccaac gtccgcccag cgaacttttt
    21601 acccacgcgt agacaccggc ttctgagttt ttatttaacg aaacaaattc tgcgatgatc
    21661 agacagaagg gaataaaata aaaaatcgtc gcgaggaaaa acatcggtgc cgaggccagt
    21721 ccaagctcaa tattattatt gataacgttg ttaaagctgt aaacggcagc aaaagtcagc
    21781 gagagcaagc cgaatttgcc gattgtatta cgtttggtat cagacataac acatctccga
    21841 aaatgtgtag ggtagcggtg gcggcaaact ccttttgccg ccgtagttgt tatttgttat
    21901 ggaaataacc atcttcgatg gtgactttga gaaccacttt tttgaccgcg ttattgcaga
    21961 taaaccgata cgcttcatgg atatcgcaaa taacgatttg cccttcgtgg acctcaacgg
    22021 tttctccgca gccttttaaa tattcacggt cagtttcatc acgataatat tccactacct
    22081 gtaatgtctc tttcggcgca tattcaattt tttgctgccc ttgcaggtag taat
//
LOCUS       DADMHC010000056        21447 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.056, whole genome shotgun sequence.
ACCESSION   DADMHC010000056 DADMHC010000000
VERSION     DADMHC010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 21447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21447
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.056"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..422
                     /locus_tag="JNZ57_001735"
     CDS             <1..422
                     /locus_tag="JNZ57_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fructuronate reductase"
                     /protein_id="HAY8827980.1"
                     /translation="ADKLIARFANPALKHKTWQIAMDGSQKLPQRMLAGIRIHLGRET
                     DWSLLALGVAGWMRYVSGVDDAGNAIDVRDPLSDKIRELVAGSSSEQRVTALLSLREV
                     FGDDLPDNPHFVQAIEQAWQQIVQFGAHQALLNTLKI"
     gene            540..1526
                     /locus_tag="JNZ57_001736"
     CDS             540..1526
                     /locus_tag="JNZ57_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HAY8827981.1"
                     /translation="MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGI
                     DGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQIL
                     DLLTAPVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPE
                     SEQALQRWWQQNGGDRQLIHSEHGKVDGHLLDLPRRNLAELPASAAHSHQHVVKKGLA
                     ALSLPEHQRWRRSLNSGQGYQACGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPE
                     GLVRINRQGDDLHIETQNVAPPDSRIELISSSEADWNALQSALLKLRLATTA"
     gene            1565..2278
                     /gene="lpxT"
                     /locus_tag="JNZ57_001737"
     CDS             1565..2278
                     /gene="lpxT"
                     /locus_tag="JNZ57_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311093.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Kdo(2)-lipid A phosphotransferase"
                     /protein_id="HAY8827982.1"
                     /translation="MIKNLPQIVLLNIVSLALFLSWYIPVNHGLWLPIDADIFYFFNQ
                     KLVESKAFLWLVALTNNRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTA
                     VVLNQLGQALIPVKRASPTLTFTNINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAF
                     MWRYFGKVAGLIALIIFVVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDR
                     LITFFDKSLPGKNKHFQNK"
     gene            2690..3256
                     /gene="mepS"
                     /locus_tag="JNZ57_001738"
     CDS             2690..3256
                     /gene="mepS"
                     /locus_tag="JNZ57_001738"
                     /EC_number="3.4.17.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional murein DD-endopeptidase/murein
                     LD-carboxypeptidase"
                     /protein_id="HAY8827983.1"
                     /translation="MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRAVG
                     SETSSLQASQDEFENLVRNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTF
                     REQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHAST
                     SSGVIISSMNEPYWKKRYNEARRVLSRS"
     gene            3437..4993
                     /locus_tag="JNZ57_001739"
     CDS             3437..4993
                     /locus_tag="JNZ57_001739"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic di-GMP phosphodiesterase"
                     /protein_id="HAY8827984.1"
                     /translation="MFIRAPNSGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYD
                     TLIIDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDK
                     KTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSG
                     VFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIA
                     GIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQ
                     FYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL
                     IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD
                     MLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET
                     ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVR
                     WLKKPYTPQW"
     gene            5075..6889
                     /locus_tag="JNZ57_001740"
     CDS             5075..6889
                     /locus_tag="JNZ57_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311096.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HAY8827985.1"
                     /translation="MIVRILLLFIALFTFGAQAQAIKESYAFAVLGEPRYAFNFNHFD
                     YVNPAAPKGGQITLSALGIFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLI
                     AESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTV
                     KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRVTSW
                     KMGQNIVYSRVKDYWAANLPVNRGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMEND
                     AKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFSDRRVREAITLAFDF
                     EWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPPEVFTQIYQPPV
                     SKGDGYDRDNLLKADTLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQ
                     HSLQRLGINMDIRKVDNSQITNRMRSRDYDMMPRLWRAMPWPSSDLQISWSSEYINST
                     YNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMAEDRLAW
                     WDKFSQPAVRPVYRLGIDTWWYDVNKAAKLPSARQQGE"
     gene            6890..7984
                     /locus_tag="JNZ57_001741"
     CDS             6890..7984
                     /locus_tag="JNZ57_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter permease YejB"
                     /protein_id="HAY8827986.1"
                     /translation="MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEF
                     GNAGVLPGAGGEGVRASHAQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHER
                     YFKMLWDYIRFDFGDSLFRSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAV
                     HNGSRFDVWSSAFIIIGYAIPAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWY
                     QKITDYLWHITLPVLATVIGGFAALTILTKNSFLDEVRKQYVVTARAKGVSEKNILWK
                     HVFRNAMLLVIAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTL
                     YIFTLIGLLLNIVSDISYTLVDPRIDFEGR"
     gene            7984..9009
                     /locus_tag="JNZ57_001742"
     CDS             7984..9009
                     /locus_tag="JNZ57_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY8827987.1"
                     /translation="MSRLSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIAND
                     KPLLVRYDGSWYFPLLKNYSESDFGGPLASQADYQDPWLKQRLENNGWVLWAPIRFGA
                     TSINFATDKPFPSPPSRQNWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVL
                     AGALQGYYGGKVDLWGQRFIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSL
                     VGVVRAEFLRTRNFDYIRAAQALGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTL
                     TSLDFLGFGLQLGSPSLGELLLQGKNNLQAPWLGITAFLSVAILLSLLIFIGEAVRDA
                     FDPNKAV"
     gene            9011..10600
                     /gene="yejF"
                     /locus_tag="JNZ57_001743"
     CDS             9011..10600
                     /gene="yejF"
                     /locus_tag="JNZ57_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter ATP-binding protein
                     YejF"
                     /protein_id="HAY8827988.1"
                     /translation="MTQTLLAIEDLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGES
                     GSGKSVTALSILRLLPSPPVEYLSGDIRFRGESLLHASDQTLRGVRGNKIAMIFQEPM
                     VSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGG
                     ERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLS
                     IVRKLAHRVAVMQNGRCVEQNYAATLFASPTHPYTQKLLNSEPSGDPVPLPEPASTLL
                     DVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSGKSTTGLALLR
                     LINSQGSIIFDGQPLQNLNRRQLLPIRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVH
                     QPTLSAAQREQQVIAVMHEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILD
                     EPTSSLDKTVQAQILTLLKSLQQKQQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQG
                     PCARVFAAPQQEYTRQLLALS"
     gene            complement(10604..10948)
                     /locus_tag="JNZ57_001744"
     CDS             complement(10604..10948)
                     /locus_tag="JNZ57_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8827989.1"
                     /translation="MTSLQLSIVHRLPQNFRWSAGFAGSKVEPIPQNGPCGDNSLVAL
                     KLLSPDGDNAWSVMYKLSQALSDIEVPCSVLECEGEPCLFVNRQDEFAATCRLKNFGV
                     AIAEPFSNYNPF"
     gene            complement(11281..12460)
                     /gene="bcr"
                     /locus_tag="JNZ57_001745"
                     /pseudo
     CDS             complement(11281..12460)
                     /gene="bcr"
                     /locus_tag="JNZ57_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311101.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter Bcr"
     gene            complement(12488..13183)
                     /gene="rsuA"
                     /locus_tag="JNZ57_001746"
     CDS             complement(12488..13183)
                     /gene="rsuA"
                     /locus_tag="JNZ57_001746"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase RsuA"
                     /protein_id="HAY8827990.1"
                     /translation="MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPE
                     HDVAYDGNPLAQQHGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLD
                     IDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDL
                     TKPAVLEVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGE
                     YRPLTEEEIASVV"
     gene            13332..15092
                     /locus_tag="JNZ57_001747"
     CDS             13332..15092
                     /locus_tag="JNZ57_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HAY8827991.1"
                     /translation="MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAEL
                     ARLARGRVLVLAHVKELVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVAR
                     NLDAFQGEFSLLIVDECHRIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGW
                     IYQFHYHGMVRGDEKALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQS
                     NGLFSEADLNRELKKQQRITPHIISQIMEFAEKRKGVMIFAATVEHAKEIVGLLPAED
                     AALITGDTPGAERDVLIEDFKAQRFRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLY
                     QQIVGRGLRLAPGKTDCLILDYAGNPHDLYAPEVGTPKGKSDNVPVQVFCPACGFANT
                     FWGKTTADGTLIEHFGRRCQGWFEDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRE
                     CDTVLVDPDDMLKAALRLKDALVLRCSGMSLQHGHDEKGEWLKITYYDEDGADVSERF
                     RLQTPAQRTAFEQLFIRPHTRTPGIPLRWITAADILAQQALLRHPDFVVARMKGQYWQ
                     VREKVFDYEGRFRRAHELRG"
     gene            15217..15501
                     /gene="rplY"
                     /locus_tag="JNZ57_001748"
     CDS             15217..15501
                     /gene="rplY"
                     /locus_tag="JNZ57_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000494192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HAY8827992.1"
                     /translation="MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDH
                     DKVINMQAKAEFYSEVLTIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA"
     gene            complement(15640..16647)
                     /gene="yejK"
                     /locus_tag="JNZ57_001749"
     CDS             complement(15640..16647)
                     /gene="yejK"
                     /locus_tag="JNZ57_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein YejK"
                     /protein_id="HAY8827993.1"
                     /translation="MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELH
                     RVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGF
                     VLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN
                     PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAE
                     RQNVRQQVYSYCNEQLQAGEEIELESLSKELAGVSEVSFTKFAAEKGYELEESFPADR
                     STLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGG
                     N"
     gene            16829..17056
                     /locus_tag="JNZ57_001750"
     CDS             16829..17056
                     /locus_tag="JNZ57_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YejL family protein"
                     /protein_id="HAY8827994.1"
                     /translation="MPQISRYSDEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNL
                     INTSIAPAQRQAIANSFARALQSSINEDKAH"
     gene            17076..18836
                     /gene="pbgA"
                     /locus_tag="JNZ57_001751"
     CDS             17076..18836
                     /gene="pbgA"
                     /locus_tag="JNZ57_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin transport protein PbgA"
                     /protein_id="HAY8827995.1"
                     /translation="MVTHRQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWP
                     TTLAGRIYSYVSIIGHFSFLVFATYLLILFPLTFIVGSQRLMRFLSVILATAGMTLLL
                     IDSEVFTRFHLHLNPIVWQLVINPDENEMARDWQLMFISVPVILLLELVFATWSWQKL
                     RSLTRRRRFARPLAAFLFIAFIASHVVYIWADANFYRPITMQRANLPLSYPMTARRFL
                     EKHGLLDAQEYQRRLIEQGNPDAVSVQYPLSELRYRDMGTGQNVLLITVDGLNYSRFE
                     KQMPALAGFAEQNISFTRHMSSGNTTDNGIFGLFYGISPSYMDGILSTRTPAALITAL
                     NQQGYQLGLFSSDGFTSPLYRQALLSDFSMPSVRTQSDEQTATQWINWLGRYAQEDNR
                     WFSWVSFNGTNIDDSNQQAFARKYSRAAGNVDDQINRVLNALLDSGKLDNTVVIITAG
                     RGIPLSEDEETFDWSHGHLQVPLVIHWPGTPAQRINALTDHTDLMTTLMQRLLHVSTP
                     ASEYSQGQDLFNPQRRHYWVTAADNDTLAITTPKKTLVLNNNGKYRTYNLRGERVKDE
                     KPQLSLLLQVLTDEKRFIAN"
     gene            18911..18987
                     /locus_tag="JNZ57_001752"
     tRNA            18911..18987
                     /locus_tag="JNZ57_001752"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:18945..18947,aa:Pro,seq:ggg)
     gene            complement(19090..>21447)
                     /gene="yejO"
                     /locus_tag="JNZ57_001753"
     CDS             complement(19090..>21447)
                     /gene="yejO"
                     /locus_tag="JNZ57_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311108.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter YejO"
                     /protein_id="HAY8827996.1"
                     /translation="NGGYQYIEMNGTAEYSVLNDGYQIVQMGGAANQTTLNNGVLQVY
                     GAANDPTIKGGRLIVEKYGITVLAAIEKGGLLEVKEGGLAIAVDQKAGGAIKASTRVM
                     EAFGTNRLGQFEIKNGIANNMLLENGGSLRVEENDFAYNTTVDSGGLLEVMDGGTATG
                     VDKKAGGKLIVSTNALEVSGTNSKGQFSIKDGVSKNYELDDGSGLIVMEDTQAIDTIL
                     DEHATMQSLGKDTGTKVQANAVYDLGRSDQNGSITYSSKAISENMVINNGRANVWAGT
                     MVNVSVRGNDGILEVMKPQINYAPAMLVGKVVVSEGASFRTHGAVDTSKADVSLENSV
                     WAIIADITTTNQNTLLNLANLAMSDANVIMMDEPVTRSSVTASAENFITLTTNTLSGN
                     GNFYMRTDMANHQSDQLNVTGQATGDFKIFVTDTGASPAAGDSLTLVTTGGGDAAFTL
                     GNAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTDVLNMAAAQPLVFDAELDTV
                     RERLGSVKSVSYDTAMWSSAINTRNNVTTDAGAGFEQTLTGLTLGIDSRFSREESSTI
                     RGLFFGYSHSDIGFDRGGKGNIDSYTLGAYAGWEHQNGAYVDGVVKVDRFANTIHGKM
                     SNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDGQDYTLSNGMRADV
                     GNTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNHVKVNDDGKFNNDVAG
                     TPGVYQAGIRSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF"
BASE COUNT         5232 a         5529 c         5247 g         5439 t
ORIGIN      
        1 atgcggacaa gttaattgca cgttttgcta atccggcgct gaaacataag acctggcaaa
       61 tcgcaatgga tggtagccag aaattaccgc aacgtatgct ggcaggtatt cgcatacatc
      121 tggggcgcga aacggactgg tcgttgctgg cattaggcgt tgctggctgg atgcgttacg
      181 tcagcggcgt tgatgatgcc ggaaatgcca ttgatgttcg cgatccgctt agcgataaaa
      241 ttcgcgaact tgttgcgggc agcagcagtg aacaacgcgt aaccgccctg ctttccctgc
      301 gtgaagtttt cggtgatgat ctgccagata acccgcattt tgtgcaggcc atcgaacaag
      361 cctggcaaca aatcgtacaa ttcggcgcac atcaggcgct attaaacacc ctcaaaattt
      421 aacgatttct gcggttaaag cggatgaagc tcaccttcgt ccgctctccc cttctctttt
      481 ctgccttttt tagccaggat taacgctcag ttaacttacc agagtattgc ggagccgttg
      541 tgaccaggac caacctcatc accggttttc tcggcagcgg gaaaaccacg tcgattcttc
      601 atctgttagc ccataaagat cccaacgaaa aatgggcggt actggttaat gaatttgggg
      661 aagtcggaat tgatggtgct ttgctcgccg atagcggcgc attgctgaaa gagatccccg
      721 gcggctgcat gtgctgcgtt aatggtttac ccatgcaggt agggttgaat accttactgc
      781 gtcagggaaa accagaccgc ttgttgatag agccgaccgg gctgggccat ccgaaacaga
      841 tcctcgatct gttaaccgca ccagtctatg aaccgtggat agatctgcgc gccaccttgt
      901 gcattctcga tccacgcttg ctgctggacg aaaaaagcgc cagcaatgaa aacttccgtg
      961 accagctggc tgccgcagac atcattgtcg ccaataaatc cgaccgtgcg acgcccgaaa
     1021 gtgagcaagc gctacagcgt tggtggcagc aaaatggtgg cgatcgacaa ttaattcaca
     1081 gtgagcatgg gaaagttgac ggtcatcttc tggatttgcc gcgtcgcaat ttagccgagt
     1141 tgcccgccag cgccgcgcat tctcatcagc atgtcgtgaa aaaagggtta gcagcgttaa
     1201 gcctgccaga gcatcaacgc tggcgtcgca gtctgaacag cgggcaagga tatcaggcct
     1261 gcggctggat attcgacgct gatacggtat tcgacaccat tggcattctg gaatgggcgc
     1321 gacttgcacc ggtggaacgc gtcaaaggcg tgctgcgtat tcccgaaggg ctggtacgaa
     1381 tcaaccgtca gggcgatgac ctgcacattg aaacgcaaaa cgttgcgcca ccggacagcc
     1441 gtattgagct gatttccagc agcgaagctg actggaatgc cttgcagagc gcgctgttga
     1501 agcttcgttt agcgactacc gcgtaaggtt gcctgcgttt ttcagtaaga taattagaga
     1561 aaatatgatt aaaaatttgc cgcaaatagt gttgttgaat attgtcagcc tcgcgctgtt
     1621 tctttcctgg tatattcccg ttaatcatgg attatggttg ccgattgatg cggatatttt
     1681 ttatttcttt aatcagaaac tggtcgaaag taaggccttt ttatggctgg ttgcattgac
     1741 caacaatcgc gctttcgacg gttgttctct gctggcgatg ggaatgttga tgctgagttt
     1801 ctggctgaaa gaaaacgccc caggcagacg acgtatcgtg attattggtc tggtaatgct
     1861 attaactgca gtggtattaa accagctggg tcaggcatta attcctgtaa aacgggccag
     1921 cccaacattg acgtttacta atattaaccg cgtcagcgaa ctgctctctg tccccacgaa
     1981 agatgcctca cgagatagct ttcccggcga tcacggcatg atgctgctta ttttttcggc
     2041 attcatgtgg cgttatttcg gtaaagttgc aggtcttatc gcccttatta tttttgtggt
     2101 ttttgcgttt cccagagtaa tgattggcgc acactggttt actgacatca ttgtcggttc
     2161 gatgaccgtg atattgatcg gtttgccctg ggtgttgctg acgccattaa gtgatcgatt
     2221 aatcaccttt tttgacaaat cactaccggg aaaaaacaaa catttccaaa acaaataact
     2281 cacagtaatt aacatcatca ggtttatttt tatagtgagg ataatcctga tgatgcgcac
     2341 cgtgctttca tctatcgaac gcaaaaatca ttctctaagt aaatgaatgg attgcatgcg
     2401 tttcactcaa tcgtacttta attgaccaat cccgcttatt aactttctgt atcacttttt
     2461 cttataaaaa atcatgtaaa accgctcgcc aagaccgcac caatcgggta atctcgaact
     2521 cgttttgcct cggcggtaga ttatcctcac agcatataat tttgtgcgtt agtccacaga
     2581 tttggcctta aggaattgtt tcaacatgcc caggtaatta gtctcgtgtc gcttggcatt
     2641 tttttataac gatatttatc gttaaggact tcaagggaaa acaaacaaca tggtcaaatc
     2701 tcaaccgatt ttgagatata tcttgcgcgg gattcccgcg attgcagtag cggttctgct
     2761 ttctgcatgt agtgcaaata acaccgcaaa gaatatgcat cctgagacac gtgcagtggg
     2821 tagtgaaaca tcatcactgc aagcttctca ggatgaattt gaaaacctgg ttcgtaatgt
     2881 cgacgtaaaa tcgcgaatta tggatcagta tgctgactgg aaaggcgtac gttatcgtct
     2941 gggcggcagc actaaaaaag gtatcgattg ttctggtttc gtacagcgta cattccgtga
     3001 gcaatttggc ttagaacttc cgcgttcgac ttacgaacag caggaaatgg gtaaatctgt
     3061 ttcccgcagt aatttgcgta cgggtgattt agttctgttc cgtgccggtt caacgggacg
     3121 ccatgtcggt atttatatcg gcaacaatca gtttgtccat gcttccacca gcagtggtgt
     3181 tattatttcc agcatgaatg aaccgtactg gaagaagcgt tacaacgaag cacgccgagt
     3241 tctcagccgc agctaataaa ccgtttggat gcaatccctt ggctatccta acgagttaac
     3301 tgaaagcact gcttaggcag tgcttttttg ttttcattca tcagagaaaa tgatgtttcc
     3361 gcgtcttgat ccaggctata gtccggtcat tgttatcttt taaatgttgt cgtaatttca
     3421 ggaaattaac ggaatcatgt tcatacgcgc tcccaattct ggacgtaagc tcctgcttac
     3481 ctgcattgta gcgggcgtga tgattgcgat actggttagc tgccttcagt ttttagtggc
     3541 ctggcataag cacgaagtca aatacgacac actgattatc gacgtacaaa agtatctcga
     3601 tacctatttt gccgacctga aatccactac tgaccggctt cagccgctga ccttagatac
     3661 ctgccagcag gctaaccccg aactgaccgc tcgcgcggcg tttagcatga atgtccgtac
     3721 gtttgtgctg gtgaaagata aaaaaacatt ctgttcatct gcgactggtg agatggacat
     3781 tccactcaat gaattgattc cggcactcga cattaataaa aacgtcgata tggcgatctt
     3841 acccggcacg ccgatggtgc cgaacaaacc cgcaatcgtc atctggtatc gcaacccttt
     3901 gctgaaaaat agcggtgtgt ttgccgctct gaatctcaac ctgacgcctt ctctctttta
     3961 tagttcacgg caggaagatt acgatggcgt cgccctcatt attggcaata ctgcgctatc
     4021 taccttttct tcacgtttga tgaacgttaa tgaattaacc gacatgccgg tccgtgaaac
     4081 taaaattgcg ggcattcctc tgaccgttcg gctttatgcg gatgactgga catggaacga
     4141 tgtgtggtac gcatttttac tgggcggcat gagtggaact gtcgttggcc tgctctgcta
     4201 ttacctgatg agcgtacgta tgcgccccgg cagagaaatc atgaccgcca tcaagcgcga
     4261 acaattttac gtggcgtatc aaccggtggt ggatacacaa gctttgcgag taacgggcct
     4321 ggaagtactg ctacgctggc ggcatcctgt cgcgggagaa attcccccgg atgccttcat
     4381 taactttgcc gaatcgcaaa agatgattgt gccgctgact cagcacctgt ttgagttaat
     4441 tgcccgcgat gccgcagaat tagaaaaagt gctgccagta ggcgtcaaat ttggtattaa
     4501 cattgcgccg gaccatctgc acagcgaaag ctttaaagca gatatccaga aactgctcac
     4561 ttccctgccc gcacaccatt tccagattgt gctggaaatt accgagcgcg atatgctgaa
     4621 agagcaagaa gccacacaac tcttcgcctg gctgcactcg gtcggcgtag aaattgctat
     4681 tgatgacttc ggcaccgggc acagcgcgct tatctatctt gagcgtttta cgctcgatta
     4741 tctgaaaatt gaccgtggat ttatcaacgc catcggtacg gaaacgatca cttcacccgt
     4801 acttgacgcg gtgctgacgc tggcgaaacg cctcaatatg ctgacggttg ctgaaggggt
     4861 cgaaacgccg gaacaggcgc gatggctaag cgaacgcggc gttaatttca tgcaaggcta
     4921 ctggattagt cgcccgttac cgctggacga ttttgttcgc tggctgaaga aaccgtatac
     4981 gccgcagtgg taaggtgtgc ttacgtccct tattattcat agtgaaagca tgccggattg
     5041 cggctaatga tgagtaaaag gaaatccgtt gcagatgatt gtgcgcatac tgctgctgtt
     5101 tatcgccctg ttcaccttcg gtgcgcaggc gcaggctatc aaggaaagct atgcctttgc
     5161 cgtgctgggc gaaccccggt acgcatttaa tttcaaccat tttgattatg tgaaccccgc
     5221 cgcgccaaaa ggtgggcaga taacgttgtc agccctcggt atcttcgata atttcaaccg
     5281 ctatgcactg cgcggcaacc cgggcgcacg caccgagcag ttgtacgaca cgctatttac
     5341 gacttccgat gacgaaccag gcagttatta cccgctgatt gctgaaagtg cacgctatgc
     5401 tgacgattat tcctgggtgg aggtcgctat taatccgcgc gcccgttttc atgatggttc
     5461 gcccattact gcccgcgatg tagagtttac ttttcaaaaa tttatgaccg aaggcgtgcc
     5521 gcaatttcgt ctggtctaca aaggcaccac cgtcaaagcc attgcaccgt taaccgtgcg
     5581 cattgagtta gctaaacccg gcaaagaaga tatgctgagt ctgttttcgc tgccggtatt
     5641 tccagaaaag tactggaagg atcacaaact tagcgacccg ctcgccacgc ctccgcttgc
     5701 cagtggtccg taccgcgtta cgtcctggaa aatggggcaa aatattgtct attcccgtgt
     5761 gaaagattac tgggcagcaa acttaccggt aaaccgtgga cgctggaatt tcgacaccat
     5821 tcgctacgat tattacctcg atgataatgt cgcctttgaa gcgtttaaag caggtgcctt
     5881 tgatttgcgt atggaaaacg acgctaaaaa ctgggccacg cgttataccg gtaaaaattt
     5941 cgataaaaaa tacatcatca aagatgagca aaagaacgaa tcagcccagg atacgcgctg
     6001 gctggcgttt aatatccaac gtccggtatt cagcgatcgc cgggtccggg aagcaatcac
     6061 tctcgccttt gactttgaat ggatgaacaa ggcgttgttt tacaacgcct ggagtcgcac
     6121 aaacagttat tttcagaata ccgaatacgc ggccagaaat taccccgacg ccgcggagct
     6181 ggtgcttctg gcaccaatga aaaaagatct accgccagaa gtcttcacac aaatctacca
     6241 gccgccggta tctaaaggcg atggctacga tcgtgacaac ctgttaaaag ccgacacact
     6301 tctcaacgaa gcgggctggg tgctgaaggg tcagcaacgc gttaatgcca caacgggtca
     6361 gccactcagc tttgaattat tgcttcccgc aagcagcaat agtcagtggg tattgccgtt
     6421 ccagcacagc ctgcaacggc tgggtatcaa catggacatt cgcaaggtgg ataactcgca
     6481 aatcaccaac cgcatgcgca gtcgcgacta tgacatgatg ccgcgcctat ggcgggcgat
     6541 gccgtggccc agttccgatt tacagatttc ctggtcatcg gaatatatca attccactta
     6601 taatgccccc ggcgtgcaaa gcccggttat cgactcactg atcaaccaaa ttattgccgc
     6661 gcagggaaat aaagaaaaat tattgccgtt ggggcgagca ctggatcgcg tattaacgtg
     6721 gaattattac atgctgccaa tgtggtacat ggcggaagac cgtctcgcct ggtgggataa
     6781 attctcccaa cccgctgtac gccctgttta cagactgggt atcgatacct ggtggtatga
     6841 cgttaataaa gcggccaaac tgccgtcagc caggcaacag ggagagtaga tgggcgctta
     6901 cctgattcgc cgtctgttgc tggtgatccc aacattatgg gcgattatca ccatcaactt
     6961 tttcatcgtg caaattgcgc ctggcggtcc ggtcgaccag gccatcgccg ccattgagtt
     7021 tggtaatgcc ggagtattac ccggcgcagg cggtgaaggt gttcgtgcca gccatgcgca
     7081 aacgggtgtc ggcaatatca gcgacagtaa ttaccgtggc ggacgcggat tagatccaga
     7141 agtgatcgct gagatcactc atcgctacgg ttttgataag ccgatccacg aacgttactt
     7201 caaaatgctc tgggactaca tccgctttga ttttggtgat agcctgtttc gcagcgcctc
     7261 ggtgctgacg ctgattaaag acagtctgcc ggtttccatc accctcggat tgtggagcac
     7321 gctgattatc tatctggtgt cgattccgtt aggcattcgc aaagctgttc ataatgggag
     7381 ccgctttgac gtctggagta gcgcatttat cattatcggc tacgccattc cggccttttt
     7441 gtttgccatc ctgctgattg tcttcttcgc gggcggcagc tatttcgacc tgttccctct
     7501 acgcggcctg gtttccgcta actttgattc gctgccgtgg tatcagaaaa tcaccgatta
     7561 tctgtggcat atcacgctgc cggtgctggc gacggtgatt ggtggctttg cggcgctgac
     7621 catactgaca aaaaactcat tccttgatga agtgcgcaag caatacgtgg tgaccgcgcg
     7681 tgcgaaaggg gtaagtgaaa aaaatattct ctggaaacat gtgttccgca acgccatgct
     7741 gctggtgatt gccggttttc cggcgacgtt tatcagcatg ttttttaccg gctcgctgct
     7801 gattgaggtg atgttttcac tcaatggtct gggcttactg ggctacgaag cgaccgtctc
     7861 gcgcgattat cctgtaatgt ttggtacctt gtatattttc accctgattg gcctgctgct
     7921 gaatattgtc agtgatatca gctatacgct ggttgatccg cgtattgatt ttgagggacg
     7981 ttaatgtcgc gactcagccc cgtcaatcag gcccgttggg cgcgttttcg tcataaccgt
     8041 cgcggctact ggtcgttatg gattttcctc gtcttgtttg gtttgagttt gtgttctgag
     8101 cttatcgcca acgataaacc gttgctggta cgttatgacg gcagttggta tttcccgttg
     8161 ttgaaaaact acagcgaaag cgattttggc ggcccgctgg caagtcaggc tgattatcag
     8221 gacccgtggc tgaaacaacg gctggaaaat aacggctggg tactgtgggc accgattcgc
     8281 tttggtgcta ccagtatcaa ctttgctacc gataagccct tcccttctcc accctcccgg
     8341 caaaactggc tgggaacgga tgccaacggc ggcgatgtgc tggcacgcat tctctatggc
     8401 acgcggatct cggttctgtt tggcctgatg ctgactctct gttccagcgt gatgggcgtg
     8461 ctggcggggg cgctacaagg ctattacggc ggtaaagtcg atctctgggg acaacgcttt
     8521 attgaagtat ggtcggggat gccgacgctg tttttgatta ttttactttc cagcgtcgta
     8581 cagcctaact tctggtggct gctggcaatt actgtcttgt ttggctggat gagtctggtc
     8641 ggcgtggtgc gggcggagtt tttacgtact cgtaatttcg actacattcg tgcggcgcag
     8701 gcgcttggcg tcagcgatcg cagtatcatc ctgcgtcata tgttgcctaa tgccatggtc
     8761 gcgaccctca cctttttacc gtttatttta tgtagttcga tcaccaccct gacctcactc
     8821 gatttcctcg gcttcggtct gcagctcggt tcaccgtcac tcggtgaact gctgttacaa
     8881 gggaaaaata accttcaggc tccgtggctt gggatcaccg ccttcttgtc ggtggcgata
     8941 ttattgtctt tgctgatctt tattggtgaa gccgtccgcg acgcatttga tcctaataag
     9001 gcggtgtagc atgacgcaaa ctctgttagc gattgaagat ttgtcggtgg gttttcgcca
     9061 tcagcaaacc gtacgtacag tagtcaatga tgtttcacta cagattgagg ctggcgaaac
     9121 gctggcgctg gtgggtgagt caggttcagg caaaagcgtt accgcgctgt caattttacg
     9181 cctgctccct tccccgccgg ttgaatatct ctccggcgat attcgttttc gtggcgaatc
     9241 gctgcttcat gccagcgatc aaacgttgcg cggtgtacgc ggtaataaga tcgccatgat
     9301 ttttcaagag ccgatggtgt cgttaaatcc attgcatacc ctggaaaaac agctttatga
     9361 agtgctttca ctccaccgcg ggatgcgtcg ggaagcggct cgaggcgaaa ttcttaactg
     9421 ccttgatcgc gttggtatcc gccaggcggc aaaacggctg acagattatc cgcatcagct
     9481 ctccggcggc gaacgccagc gggtgatgat tgcgatggcg ctgttaacgc gaccggaatt
     9541 attaattgcc gatgaaccga ccaccgcact ggacgtctct gtccaggcgc agattttaca
     9601 gctgttgcgc gaactgcaag gcgagctgaa tatgggcatg ctgtttatta ctcataacct
     9661 cagcattgtc agaaaactgg cccaccgcgt ggcggtaatg caaaacggtc gctgtgtcga
     9721 gcaaaattac gccgctacgc tatttgcctc acccactcat ccttacacac aaaagctact
     9781 caacagtgaa ccgtcaggcg atccagtgcc gttgccagaa cctgcctcaa cgttgctgga
     9841 tgttgaacag cttcaggttg ccttccccat tcgcaaaggg attttgaagc gcattgtgga
     9901 tcataatgtg gtggtgaaaa acatcagttt tacgctacga gcgggtgaaa cactgggttt
     9961 agtgggcgag tccggttccg ggaaaagtac gacgggactg gcgctgctgc gactgattaa
    10021 ttctcagggc agcatcatct ttgacggtca gccactgcaa aatttaaatc gccgccagct
    10081 gttacctatt cgtcatcgca ttcaggtggt atttcaggat ccaaactcct cgctcaaccc
    10141 acgactcaac gttttgcaga ttattgagga aggcttacgg gttcaccagc cgacgctttc
    10201 tgccgcacaa cgcgaacaac aagtgatagc cgtgatgcat gaagtgggat tagatcctga
    10261 aacacgccac cgttatccgg cggagttctc tggtggtcag cgacaacgta ttgcaattgc
    10321 cagggcatta attcttaagc cctcgctgat catacttgat gaaccgacat catcactcga
    10381 caaaacggta caggcgcaaa tattgacgct attgaaatca ttgcaacaaa agcagcaact
    10441 ggcctatttg tttatcagcc acgatttgca cgttgtccgc gcgttatgtc atcaggttat
    10501 cgtactgcga caaggggaag tagtggaaca aggaccgtgc gcgcgcgtgt ttgccgcacc
    10561 gcagcaggag tatacgcgtc agctactggc gttgagctga cgcttaaaaa ggattgtagt
    10621 ttgaaaaggg ttcggcaatt gccacaccaa aatttttcaa tcggcatgtt gcagcaaact
    10681 cgtcctggcg atttacaaac aggcacggct caccttcaca ctccagcacc gaacacggaa
    10741 cttcgatgtc gcttaacgcc tggcttagtt tgtacatcac cgaccatgca ttatcaccat
    10801 ccgggctaag caatttaagc gccaccaggc tgttgtcacc gcacggtcca ttttgcggaa
    10861 tcggttcaac cttcgaacct gcgaaaccag cagaccagcg aaagttctgc ggtagacgat
    10921 ggacgattga gagttgtaat gaagtcactt attttccccg gaagcacatt tacttcacaa
    10981 tttgtttaca tcaattttaa cacatcatca acaatccgtc tttatacaga tcgtaaagat
    11041 tgatgcctcg cctgcgtggc ctctatggct ctgatttaag taatatctgc gggcgtggtc
    11101 acgtttgcgg ggctatatgt acccgtttct gcgatctaac tcaacctttt taactacaat
    11161 gatgtgactt tttacataaa ttgattttac ataaaataaa catatatcgg gggaatgata
    11221 gatttgtggt tgacatgcat caacaaagga agccttttag cttcctcgtt gtgcaataga
    11281 tcaccgtttt ttcggtcgac tggcgtacag acagaagaga atggagctgc ttgcgcagaa
    11341 tgcaattgac caaatcatcg gccatgcaga gttaaaggtc gcaagagaaa gcaatgcgcc
    11401 aacaattgcc cctatgccaa aacggaaggt tcctgccagc gaagatgccg ttcccgccat
    11461 atggggaaac tcatcaagaa tgaccgccat cgcattggat gacaccatcg acacacagcc
    11521 cacaaacgcc gcaacgccaa ccaccagcga ccagaatccc agccccagca gcgcactgat
    11581 gaccatccac gctgccataa taaattgtat ccacaacccc gagcggaaca tatttaacgc
    11641 gccaatgcgg cgaacgaagc ggctgttaaa gatggtcatc acgaacagga aaacaatgtt
    11701 tagtgcaaag taataaccaa agttttccgg cgcgacgtgg ttaatttcaa tgtagacaaa
    11761 cggtccggcg ctcaggaacg agaacattcc ggcaaagctg aaaccgctgg ccagcatata
    11821 actcaggaca cgcttatgac ggaacagcgc cgcaaagtta ccaatagtag tacgaatgtg
    11881 aaaaggctgg cgacgctccg gtggtaaggt ttctttgatc agaaagaaga tcattgccga
    11941 agccagaatc gccgccacgg cgaggatcca gaagatgtaa tgccagctca gccacaccag
    12001 cacccagccg ccaactatcg gtgccatcag cggtgcaatg gtcgtcacca gcatgacacc
    12061 gcgagaactc ttctttcggg tagatatcac gcatcaaagc gttgataacc atgctggccg
    12121 cagccgcagc cagcccgtgg aaaaaacgca tcacaatcag ctgatcgatg gtttgtgcca
    12181 acgcacacgc caccgcggcg gcggcaaaca ccagcgtacc gccgagcacc accggcttac
    12241 gcccgaagct gtctgccatc ggcccgtaga ttaactgccc caacgcaaag cccagaatat
    12301 aagtactgag ggtcatctgc gtactgcccg ccggtacgcc aaactgcgct gaaattaccg
    12361 gtagcgcggg cagatacata tcaatcgaca gcggcatcaa catggccagc aggccaagga
    12421 taaaaacaat agcaaacgac gaatgctgtc gggtggtcac aacgggctcc tgaaagtcat
    12481 tgaaaagtta gacgacgctg gcaatttctt cttcagttaa cggacgatat tcaccggggg
    12541 ctaaatcagc atccagcgta ataccgccaa tacgttcacg atgcagctca accacgtggt
    12601 tacccacggc ggcgaacatg cgtttcacct gatgataacg cccttcgctg atggtcagac
    12661 gaacctgcgt tggggtaatc acttccagca ccgcaggctt agtgagatct ttttcgttat
    12721 gcagctgcac gcctttagca aattgctctg ccgtatcgtc agctacaggt gattccagtg
    12781 tcaccagata ggtcttctcg caatgatggc gcggagaagt aatgcggtgc gaccactgac
    12841 catcatcagt catcagcacc agaccggtgg tatcgatatc cagacgtcct gcggcgtgca
    12901 gtttccaggc taccggttca tccagaaaat agagcaccgt tgggtgatca gggtcgtccg
    12961 tggagcaaac atagccctga ggcttattga gcatgaagta acgtggacca tgttgctgcg
    13021 ccagcgggtt gccatcgtaa gcgacatcat gttcaggaag cagtttgaac gctgcattac
    13081 gaacaatttc gccatcgacg gtgacacgat tgccgcggat ttcacgcccg gcaatagcac
    13141 ggctaacgcc gagttgctgt gcgataaatt tatcaagtcg catgtgtgtg attttgcctg
    13201 taaaaacgga ggtcgggcat tgacccgaaa atctgaactg ttgtctgccc agtatagcgg
    13261 tctaataaca tccctcaagg gaaaaagatc catggcatac tattagcaga ataatctacc
    13321 tacgcgagac catgattttt acactccgcc catatcagca agaagccgtg gatgccacgc
    13381 tcaaccattt tcgtcgtcat aaaacccctg ccgttatcgt gctgcccacc ggcgcaggta
    13441 aaagcctggt gattgccgaa ctggcacggc tggcgcgtgg tcgtgttctg gtgctggcac
    13501 acgtcaaaga actggtggcg caaaaccatg caaagtatca ggcgctgggg ctggaagccg
    13561 atatttttgc cgctgggtta aagcgcaaag agagccacgg taaagtggta tttggcagcg
    13621 tgcagtcggt cgctcgtaat cttgatgcct ttcagggtga attttcgctg ttgattgtcg
    13681 atgaatgcca ccgtattggt gacgatgaag agagccagta tcagcaaatc ctcactcacc
    13741 tgactaaagt gaatccccac ttacgcctgc tggggctgac tgccacgcct tttcgattgg
    13801 gcaaaggctg gatctaccag ttccattatc acggcatggt acgcggcgat gagaaagccc
    13861 ttttccgtga ctgcatttat gagctgccgc tgcgttatat gattaaacac ggctatctga
    13921 cgccgccaga acgactggat atgccagtag tgcaatacga tttcagccgc ttgcaggcac
    13981 agagtaacgg gctgttcagc gaagctgatc tcaaccgtga gctgaaaaaa cagcaacgca
    14041 ttacgccaca tatcatcagc cagatcatgg agttcgccga aaagcgcaaa ggggtaatga
    14101 ttttcgccgc caccgttgaa cacgcaaaag agattgtggg attactgcct gccgaagatg
    14161 cagcactgat tactggcgac acccccggcg ctgagcgcga tgtgttaatt gaagatttta
    14221 aagcccagcg ttttcgctat ctggtcaacg tcgcggtact gaccaccgga tttgacgccc
    14281 cgcacgtcga tcttatcgcc attctgcgtc ctaccgaatc agtgagtctt taccaacaaa
    14341 ttgtcgggcg cggtctgcgt ctcgctcctg gcaagactga ttgcttaatt cttgattatg
    14401 cgggtaatcc tcacgacctc tacgcgccgg aagttggtac accgaaaggc aaaagtgaca
    14461 acgtcccggt acaggttttc tgccctgcct gcggttttgc caacaccttt tgggggaaaa
    14521 cgaccgccga cgggacattg attgaacact ttggtcgtcg ctgtcaggga tggtttgaag
    14581 atgacgacgg ccatcgcgaa cagtgtgact tccgtttccg ttttaaaaat tgcccgcaat
    14641 gtaacgcgga aaacgatatt gccgcccgcc gctgccgcga atgtgacacg gtactggttg
    14701 atccggatga tatgttaaaa gcggcgctac gactgaaaga cgcgctggta ttacgctgta
    14761 gcggcatgtc tttacagcat gggcacgacg agaaaggcga atggttgaaa atcacctatt
    14821 acgatgaaga cggcgcggat gtgagtgagc gtttccgtct gcaaacgccc gcccagcgaa
    14881 ctgccttcga gcagcttttt atccgcccgc atacgcgcac accgggcatc cctctgcgct
    14941 ggatcaccgc cgccgatatc ctcgcccagc aagccttact gcgacatccg gattttgtcg
    15001 tcgcccgcat gaaaggtcag tactggcagg tgcgtgaaaa agtgttcgat tacgaaggtc
    15061 gttttcgtcg ggcgcacgaa ttacgcggtt aatggtagtt ttgattgatg tataaggcga
    15121 ttgagtatag aatctcgccc gcttttgcat acgcaaagca gatcacttac ctgttgctgg
    15181 gtcgcctgta gcaggattaa tttaagagag aaagaaatgt ttactatcaa cgcagaagta
    15241 cgtaaagagc agggtaaggg tgcgagccgc cgcctgcgtg ccgctaacaa gttcccggca
    15301 atcatctacg gtggcaaaga agcaccgctg gctatcgagc tggatcacga caaagtcata
    15361 aacatgcaag ctaaagctga attctacagc gaagttctga ccatcgttgt tgacggtaaa
    15421 gaaatcaaag ttaaagctca ggacgtacag cgtcacccgt acaaaccgaa gctgcagcac
    15481 atcgacttcg ttcgcgctta attgctgaat aagttgtaaa aaaccccgct ccggcggggt
    15541 tttttgtatc tgcagattat gcctgattac ggtattgcta ttttttgcag gccagataag
    15601 gcgttcacgc cgcatctggc attcagaaca caaaaccgat taattgccgc cagacgtccg
    15661 gcgctgcaat tggtcgcgca aattcggcgg cgtgccttta atggtcaaag tatcggttgc
    15721 tggatcccag aagatgcgtt cacctaacag catcgcatca aagttaatag tcaagccacc
    15781 gccgctaccg gcaaacttcg tcaactgacg cagtgtgcta cggtctgccg ggaagctctc
    15841 ttccagttcg tagccttttt cagccgcaaa cttcgtgaag ctcacttcgc ttacgcctgc
    15901 cagctctttc gacagcgatt ccagttcgat ctcttcgcct gcctgcagct gctcattaca
    15961 gtagctataa acctgctggc gcacgttctg tcgctctgct ttatccagtt gtgcttcggc
    16021 agtgaaatca tcaaccgctt gcaacagccc acggttttgc gctttcgcgt tcaatccttc
    16081 gctggccccg aggaaatcca taaagaaatc cgccactttg cgccctactc gccctttcag
    16141 gaaagtgaga tagcgggtgg actctggatt ggtttcccat tcggttaaat cgatacgcgc
    16201 aacaatatcc gcatgattga tatcaagata atgggttggg ttgatgtcga gattttcgtt
    16261 aacgcgcata ctgctcaggt tgctcagaac tgccaccagc agatactcca ccgccagata
    16321 acggtagtgg caaaacagca cgaatccacc gtcagcaaaa ggatatttcg ctaattcgtc
    16381 acgcaggcgc ccggttgccg cgcggctaaa tgccagaaag tcctcttcgc cctgacgctg
    16441 taagcgcagc gtctgcgcca gttcactctc ttcgctaaac aagccgtaag ctttattttt
    16501 ggcgctatag acccgatgca gttctgccac catctcaacg acggtttctg tcggttccag
    16561 caatgaatcg cgcaacacca gctcaaggtt ctgctcatca cgcttgataa gctggtgcag
    16621 agcaatctgg ttgatatcca gactcatgat aaactctcct ttaagaccgg gcggtattca
    16681 accaccgccg gttaagcgac gcaataaaag atggcggtca ttttacagaa ggcagcgtaa
    16741 cgagaatgat ttaacgcata aaaaagcaga aaaaaaaccg ttgctacggt aatatgttgc
    16801 cctttcatca actaactgat ttcgatttat gccacaaatt tcccgctaca gtgatgaaca
    16861 ggttgaacaa ttgctcgcag agctgctcaa cgtactggaa aaacataagg ctccgaccga
    16921 cctttccctg atggtgttag gcaacatggt cactaacctt atcaacacca gcattgcccc
    16981 ggcccaacgc caggcaattg ccaactcttt tgcccgcgcc ttacagtcct ctatcaacga
    17041 agacaaagcg cactaaggga aacagataac aggttatggt aactcatcgt cagcgctacc
    17101 gtgaaaaagt ctcccagatg gtcagttggg ggcactggtt tgcactgttc aatattctgc
    17161 tttcgctcgt cattggcagc cgttacctgt ttatcgccga ctggccgaca acgcttgctg
    17221 gtcgcattta ttcctacgta agcattatcg gccatttcag cttcctggtg ttcgccacct
    17281 acttgctgat cctcttcccg ctgaccttta tcgtcggctc ccagaggctg atgaggtttt
    17341 tgtccgtcat tctggcaacg gcgggaatga cgctattact gatcgatagc gaagtcttta
    17401 ctcgtttcca tctccatctt aatcccatcg tctggcagtt ggttatcaac ccagacgaaa
    17461 atgagatggc gcgcgactgg cagctgatgt tcatcagcgt gccggttatt ttattgcttg
    17521 aactggtgtt tgcgacgtgg agctggcaaa agctgcgcag cctgacgcgt cgtcgacgct
    17581 tcgcgcgccc gctggccgca ttcttattta tcgcctttat cgcctcgcat gtggtgtata
    17641 tctgggccga tgccaacttc tatcgcccga tcaccatgca gcgcgctaac ctgccgcttt
    17701 cgtacccgat gacggcgcga cgtttccttg agaagcatgg cctgcttgat gcgcaggagt
    17761 atcaacgccg tcttattgag caaggtaatc cagacgccgt ttccgtacag tatccgttaa
    17821 gcgaactgcg ctatcgcgat atgggcaccg ggcagaatgt gctgttgatt actgtcgatg
    17881 gcctgaacta ctcacgcttc gagaagcaga tgcctgcgct ggcaggtttt gctgagcaaa
    17941 atatttcgtt cacgcgccat atgagctccg gcaacactac agacaacggc atctttggcc
    18001 tgttctatgg catctcgccg agctatatgg acggcattct gtcgacccgt acccctgcgg
    18061 cgttaattac tgcgcttaat cagcaaggct atcagctggg attattctcg tcagatggct
    18121 ttaccagtcc gctgtatcgc caggcattgt tgtcagattt ctcgatgccg agcgtacgca
    18181 cccaatccga cgagcagacc gccacgcagt ggatcaactg gctgggccgc tacgcacaag
    18241 aagataaccg ctggttctcg tgggtctctt tcaatggcac taacattgac gacagcaatc
    18301 agcaggcatt tgcacggaaa tatagccggg cggcaggcaa tgtcgatgac cagatcaacc
    18361 gcgtgctcaa tgcactgctt gattctggca aactggacaa tacggttgtg attatcactg
    18421 ccggtcgggg tattccgctg agcgaagacg aagaaacctt tgactggtcc cacggtcatc
    18481 tgcaggtgcc attagtgatt cactggccag gcacgccggc gcagcgtatt aatgcgctga
    18541 ctgatcatac cgatctgatg acgacgctga tgcaacgcct gctacatgtc agcacacctg
    18601 ccagcgaata ttcgcaaggt caggatttgt tcaaccctca acgccgtcat tactgggtca
    18661 ctgcagcgga taacgatacg ctggcaatta ccaccccgaa aaagacgctg gtgctgaaca
    18721 ataacggtaa ataccgcact tacaacttac gtggtgaaag agtgaaagat gaaaaaccac
    18781 agttaagttt gttattgcaa gtgctgacag acgagaagcg ttttatcgct aactgattaa
    18841 ttataaatca gttagcgaaa tatcttactt gcaatcggtg tggaaaacgg tagtattagc
    18901 agccacgagt cggcacgtag cgcagcctgg tagcgcaccg tcatggggtg tcgggggtcg
    18961 gaggttcaaa tcctctcgtg ccgaccaaaa atcccaagaa aaaaccaacc tttacggttg
    19021 gtttttttat atctgcaatt aatttgataa acagaccgtg acacatcaca gcctgtttat
    19081 tttctgttat cagaacgtcc agaccactcc cgcctgagta ttccacggcg attctacccc
    19141 tgcgccattg ccatagctga ctgacaaatg accgcttaac gtcggggtaa acgatgacct
    19201 tatcccagcc tgataaacgc caggggttcc agccacatca ttattaaatt tgccatcgtc
    19261 attaactttc acatggttag aatcggcgta ttcctgacgt acggcggctt tcagccaggg
    19321 ttccagcgtc gtaccatttt gcaggtccat gtgatagctt accgccgttc ccgcttcagc
    19381 gcgtaatatc cgggtatttc ccacatcagc gcgcatgccg tttgataacg tgtagtcctg
    19441 accatctgtg gtaaagccgg taaaggccag atagggtcta acactccaca atccgtcaac
    19501 ccaacggaac ccgctctcaa catgagcacc cgcgccgtta ctattgtaat cgccaaacgc
    19561 tgttgcccca ttactcatct tgccatggat ggtgttggca aaacggtcaa ctttcaccac
    19621 cccatcaaca taggcaccgt tctgatgctc ccaaccggca taagccccca gggtatagct
    19681 atcgatatta ccttttccgc cgcgatcaaa accaatatca gaatgagagt aaccaaagaa
    19741 caagccgcga attgtactgc tttcttcacg ggagaaacgg ctatcgatac cgagcgtcag
    19801 gcccgtcaat gtttgctcaa aaccagctcc cgcatcagtg gtcacgttgt tgcgggtgtt
    19861 aattgccgaa ctccacatcg ccgtatcgta actaacgctt tttacgctac caagacgctc
    19921 acgcacggtg tccagttctg catcaaatac cagcggttgt gcggccgcca tattcagcac
    19981 atcagtggtt gaaggggtaa tttgcgcgcg attctctgcc aaactccagc tatggttgcc
    20041 attatccagc aaggtatatt catacgtacc gatatcaaca acgcctccgg cattgcccaa
    20101 cgtaaatgca gcatcaccgc cgcccgttgt taccagtgta aggctatctc ctgctgccgg
    20161 gctggcaccg gtgtccgtca cgaatatttt gaaatcacct gttgcctgac cggtgacgtt
    20221 gagctgatcg ctctgatgat tagccatatc ggtacgcata taaaaattgc cgtttcccga
    20281 cagggtattg gtggtcaacg taatgaaatt ttccgcactt gccgtcactg atgaacgagt
    20341 cactggctca tccatcataa tcacatttgc gtcagacatc gcaaggttgg ctaagttgag
    20401 gagggtgttt tggttcgtcg tagtgatatc ggcaatgatg gcccatacgc tattttcgag
    20461 cgaaacgtcc gctttgctgg tatccacggc accatgcgtt ctaaaagaag cgccctcaga
    20521 aaccactacc ttacccacca acatagcggg tgcataattt atttgcggct tcatgacctc
    20581 aagaatgcca tcattccctc tgactgacac gttaaccatt gtgccagccc agacattagc
    20641 gcggccattg ttgataacca tattttcaga gatggcttta gaggaatacg tgatacttcc
    20701 attctggtct gatcgaccga gatcatatac cgcatttgcc tgcactttcg taccagtatc
    20761 ctttcccagc gattgcatag tggcatgctc atcaaggata gtatcaatgg cctgcgtgtc
    20821 ctccataaca atgagcccgg aaccatcatc cagttcataa ttttttgaca caccatcttt
    20881 tatactaaat tggcctttac tgtttgtacc actcacttcc agcgcattcg ttgagacaat
    20941 taattttccg cctgcttttt tatcaacgcc agttgcagtc ccgccatcca taacctccag
    21001 taagccgcca ctatctacag tagtattata agcgaagtca ttttcttcaa ctcgcaaact
    21061 tccgccgttt tccaacagca tattgttagc aataccattc ttgatttcga actgaccgag
    21121 acggtttgtt ccgaatgcct ccatgacccg cgtgcttgct ttaatagcac cgcctgcttt
    21181 ctgatctacc gcaatcgcta atcccccctc tttaacctcc agtaatcctc ccttttcgat
    21241 agcggcaagg acggtaatcc catatttttc aacgattaag cgcccgcctt taatcgtggg
    21301 atcattcgct gcgccataaa cctgtagcac accattattg agggtagtct ggtttgccgc
    21361 gccacccatt tgaacaattt gataaccgtc atttaatact gagtattctg cggtaccatt
    21421 catttcaatg tactgatacc ctccgtt
//
LOCUS       DADMHC010000057        21162 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.057, whole genome shotgun sequence.
ACCESSION   DADMHC010000057 DADMHC010000000
VERSION     DADMHC010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 21162)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21162)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21162
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.057"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            40..969
                     /gene="aaeR"
                     /locus_tag="JNZ57_001754"
     CDS             40..969
                     /gene="aaeR"
                     /locus_tag="JNZ57_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator AaeR"
                     /protein_id="HAY8827997.1"
                     /translation="MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVSKLEDEL
                     QVKLLNRSTRSIGLTEAGRIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSSTM
                     AQNVLAGLTAKMLKEYPGLSVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGA
                     MPMVVCAAKSYLTQYGIPEKPADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRF
                     VTNDPMTLVRWLTAGAGIAYVPLMWVINEINRGELEILLPRYQSDPRPVYALYTEKDK
                     LPLKVQVVINSLTDYFVEVGKLFQEMHGRGKEK"
     gene            complement(1097..2542)
                     /gene="tldD"
                     /locus_tag="JNZ57_001755"
     CDS             complement(1097..2542)
                     /gene="tldD"
                     /locus_tag="JNZ57_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HAY8827998.1"
                     /translation="MTLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSY
                     HESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRD
                     SGDGKVQTLGAVGHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLS
                     GVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGAGGGGGRFGYEFFLADLD
                     GEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRR
                     GTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQ
                     DKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFG
                     GGQVDITSGKFVFSTSEAYLIENGKVTKPVRGATLIGSGIETMQQISMVGNDLKLDNG
                     VGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA"
     gene            complement(2698..6498)
                     /locus_tag="JNZ57_001756"
     CDS             complement(2698..6498)
                     /locus_tag="JNZ57_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709041.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA2 domain-containing protein"
                     /protein_id="HAY8827999.1"
                     /translation="MRRLPGILLLTGAALVVIAALLVSGLRIALPHLDAWRPEILNKI
                     ESATGMPVEASQLSASWQNFGPTLEAHDIRAELKDGGEFSVKRVTLALDVWQSLLHMR
                     WQFRDLTFWQLRFRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSG
                     QRAELAIPQLTWLNDPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQ
                     ADDIDLKPWLGKWMQDNIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQT
                     HTLSVDNLTAHITRENPGWQFSIPDTRITMDGKPWPSGALTLAWIPEQDVGGKDNKRS
                     DELRIRASNLELAGLEGIRPLAAKLSPALGDVWRSTQPSGKINTLALDIPLQAADKTR
                     FQASWSDLAWKQWKLLPGAEHFSGTLSGSVENGLLTASMKQAKMPYETVFRAPLEIAD
                     GQATISWLNNDKGFQLDGRNIDVKAKAVHARGGFRYLQPANDEPWLGILAGISTDDGS
                     QAWRYFPENLMGKDLVDYLSGAIQGGEADNATLVYGGNPQLFPYKHNEGQFEVLVPLR
                     NAKFAFQPDWPALTNLDIELDFINDGLWMKTDDVNLGGVRASNLTAVIPDYSKEKLLI
                     DADIKGPGKAVGPYFDETPLKDSLGATLQELQLDGDVNARLHLDIPLNGELVTAKGEV
                     TLRNNSLFIKPLDSTLKNLSGKFSFINGDLQSEPLTASWFNQPLNVDFSTKEGAKAYQ
                     VAVNLNGNWLPAKTGVLPAAVNEALSGSVAWDGKVGIDLPYHAGATYNVELNGDLNNV
                     SSHLPSPLAKPAGEPLPVNVKVDGNLSSFELTGQAGADNHFNSRWLLGQKLTLDRAIW
                     AADSKTLPPLPEQSGVELNMPPMNGAEWLALFQKGAAESVGGAASFPQHITLRTPMLS
                     LGNQQWNNLSIVSQPTANGTLVEAQGREINATLAMRNNAPWLANIKYLYYNPSVAKTR
                     GDSTPSSPFPTTERINFRGWSDAQIRCTECWFWGQKFGRIDSDLTISGDTLTLTNGLI
                     DTGFSRLTADGEWVNNPGNERTSLKGKLRGQKIDAAAEFFGVTTPIRQSSFNVDYDLH
                     WRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRLLSVDALMRKLRFDFRDTF
                     GEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNLVRRDLNMEAVVAPEIS
                     ATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYHISGPLDDPQINEVLRQPRK
                     EKAQ"
     gene            complement(6566..8035)
                     /gene="rng"
                     /locus_tag="JNZ57_001757"
     CDS             complement(6566..8035)
                     /gene="rng"
                     /locus_tag="JNZ57_001757"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HAY8828000.1"
                     /translation="MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKG
                     RVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQD
                     LMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAE
                     YCDEQGGFIIRTAAEGVGEAELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQR
                     VLRDFADAELDRIRVDSRLTYEALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEI
                     QRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQ
                     LRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSVNGFSALGLVEMTRKR
                     TRESIEHVLCNECPTCHGRGTVKTVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAE
                     ALKGEESHSLAEVEIFVGKQVKVQIEPLYNQEQFDVVMM"
     gene            complement(8025..8618)
                     /gene="yhdE"
                     /locus_tag="JNZ57_001758"
     CDS             complement(8025..8618)
                     /gene="yhdE"
                     /locus_tag="JNZ57_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphatase YhdE"
                     /protein_id="HAY8828001.1"
                     /translation="MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQY
                     VVRLAREKAQAGVAQTAQDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQ
                     VMTAVVLADSQHILDCLVVTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFV
                     RKINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG"
     gene            complement(8627..9115)
                     /gene="mreD"
                     /locus_tag="JNZ57_001759"
     CDS             complement(8627..9115)
                     /gene="mreD"
                     /locus_tag="JNZ57_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001487551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HAY8828002.1"
                     /translation="MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILL
                     YWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQ
                     QALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFA
                     VQ"
     gene            complement(9115..10200)
                     /gene="mreC"
                     /locus_tag="JNZ57_001760"
     CDS             complement(9115..10200)
                     /gene="mreC"
                     /locus_tag="JNZ57_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HAY8828003.1"
                     /translation="MKPIFSRGPSLQIRLILAVLVALGIIIADSRLGTFSQIRTYMDT
                     AVSPFYFVSNAPRELLDGVSQTLASRDQLELENRALRQELLLKNSELLMLGQYKQENA
                     RLRELLGSPLRQDEQKMVTQVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQ
                     VVAVAKLTSRVLLICDATHALPIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGD
                     VLVTSGLGGRFPEGYPVAVVSSVKLDTQRAYTVIQARPTAGLQRLRYLLLLWGADRNG
                     ANPMTPEEVHRVANERLMQMMPQVLPSPDAMGPKLPEPATGIAQPTPQQPTTGNAATA
                     PAANRSPQRATPPQSGAQPPARAPGGQ"
     gene            complement(10266..11309)
                     /locus_tag="JNZ57_001761"
     CDS             complement(10266..11309)
                     /locus_tag="JNZ57_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000913396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HAY8828004.1"
                     /translation="MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQD
                     RAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNS
                     FMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATG
                     SMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERI
                     KHEIGSAYPGDEVREIEVRGRNLAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALE
                     QCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIPVVVAEDPLTCVARGGGKALE
                     MIDMHGGDLFSEE"
     gene            complement(11614..13554)
                     /gene="csrD"
                     /locus_tag="JNZ57_001762"
     CDS             complement(11614..13554)
                     /gene="csrD"
                     /locus_tag="JNZ57_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase E specificity factor CsrD"
                     /protein_id="HAY8828005.1"
                     /translation="MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQA
                     VATAIDTHLVSNDFSTLRPQITELMMSADIVRVGLLHGDKQVYTLARNGSYRPVGSSD
                     LFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAISFIIVMLFLAVRWLQR
                     QLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDT
                     LIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS
                     QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDT
                     LPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK
                     GRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMPM
                     VLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKS
                     QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL
                     KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG
                     DFFASSQPLDTNVKKYSQRYSV"
     gene            13706..14680
                     /locus_tag="JNZ57_001763"
     CDS             13706..14680
                     /locus_tag="JNZ57_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HAY8828006.1"
                     /translation="MQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDA
                     LAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQA
                     RVKGDWLVAMPQGLDARKAIIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVG
                     STAVALLHKLGYQVVAVSGRESTHEYLKSLGASRILPRDEFAESRPLEKQVWAGAIDT
                     VGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRA
                     QAWQRLVADLPESFYTQAAKEISLSEAPNFAEAIINNQIQGRTLVKVN"
     gene            15658..16128
                     /gene="accB"
                     /locus_tag="JNZ57_001764"
                     /gene_synonym="fabE"
     CDS             15658..16128
                     /gene="accB"
                     /locus_tag="JNZ57_001764"
                     /gene_synonym="fabE"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HAY8828007.1"
                     /translation="MDIRKIKKLIELVEESGISELEISEGEESVRISRAAPAASFPVM
                     QQAYAAPMMQQPAQSNAAAPATVPSMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAF
                     IEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE"
     gene            16139..17488
                     /gene="accC"
                     /locus_tag="JNZ57_001765"
     CDS             16139..17488
                     /gene="accC"
                     /locus_tag="JNZ57_001765"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009483995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HAY8828008.1"
                     /translation="MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLL
                     ADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIF
                     IGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKA
                     SGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADG
                     QGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFE
                     FLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHA
                     VECRINAEDPNTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYG
                     ENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQEK"
     gene            complement(17580..18627)
                     /locus_tag="JNZ57_001766"
                     /pseudo
     CDS             complement(17580..18627)
                     /locus_tag="JNZ57_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000787050.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase family protein"
     gene            complement(18624..19586)
                     /locus_tag="JNZ57_001767"
     CDS             complement(18624..19586)
                     /locus_tag="JNZ57_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000048618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY8828009.1"
                     /translation="MSKVFTIGEILVEIMASKIGQPFDQPGIWNGPYPSGAPAIFIDQ
                     VTRLGVPCGIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDR
                     DFIFNIKNAACGKLSAQHVDENILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGG
                     VISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSPHSTPERAIAGFLEE
                     GVKEVIVKRGNQGASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFDVHR
                     ALQYANACGALAVTRRGPMEGTSRLAEIEAFIQRHDMSIREAAQ"
     gene            complement(19608..20597)
                     /locus_tag="JNZ57_001768"
                     /pseudo
     CDS             complement(19608..20597)
                     /locus_tag="JNZ57_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001525780.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            complement(20598..>21162)
                     /locus_tag="JNZ57_001769"
     CDS             complement(20598..>21162)
                     /locus_tag="JNZ57_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020245594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HAY8828010.1"
                     /translation="VLIDGKEVRITNPKQAIDHGIAFVTENRKEEGLVLMHDVNMNTH
                     HVAFQYNASRMGLINHRQEEAKTLQSIARMNTKVSSVHQAVGALSGGNQQKIVLSKWL
                     EKTPRILLLDEPTRGVDVGAKFEIYNVIRQLAAAGTAIILVSSELPEVMALSDRLVVM
                     RNKTIADIYSCENLTQTQVMTAATGVR"
BASE COUNT         5208 a         5779 c         5124 g         5051 t
ORIGIN      
        1 tattatgtga tctaaatcac ttttaagtca gagtgaataa tggaacgact aaaacgcatg
       61 tcggtgtttg ccaaagtagt tgaatttggc tcttttaccg ccgccgccag acagctacag
      121 atgagcgttt cgtccatcag tcagacggtg tcaaaactgg aagatgagtt gcaggtaaag
      181 ctgttaaacc gtagcacacg cagcattggc ctgaccgaag ccggtagaat ttactaccag
      241 ggctgccgtc gtatgcttca tgaagtgcag gatgttcatg agcaactgta tgccttcaat
      301 aacaccccca tcgggacgct acgcattggc tgttcttcaa ctatggcaca aaatgttctc
      361 gccgggctga cagccaaaat gctgaaagaa tacccaggtt tgagcgtcaa tctggttacc
      421 ggaattccag cccccgacct gattgccgac ggtctggatg tggtgatccg cgtcggcgcg
      481 ttgcaggatt ccagcctgtt ttcccgccgt cttggcgcga tgccaatggt ggtgtgcgcc
      541 gcgaaaagct atctcacaca atacggcata ccggaaaaac ccgccgattt aagtagccat
      601 tcatggcttg aatacagcgt gcggcccgac aatgaatttg aactgattgc accggaaggg
      661 atctcgactc gcctgatccc gcaagggaga tttgtgacta atgatccgat gacgctggtg
      721 cgctggctaa cggcgggtgc cgggatcgcc tacgtgccgc tgatgtgggt gatcaacgag
      781 atcaatcgtg gggagctgga gatcctgctg ccgcgttatc agtcagatcc acgcccggtt
      841 tatgcgttat ataccgaaaa agataagctg ccgctgaagg tacaggtcgt gatcaactcg
      901 ctgacggatt attttgttga ggtcggtaaa ttgtttcagg agatgcacgg gcgcgggaaa
      961 gagaagtaat tcatattgta ctgttacgtt ctacaaacct gtgccaacgg gttcccctca
     1021 ccctaacccc agaggagcga ggggaccgtt cgtgcatgta gaaagattaa ttatccttct
     1081 gaaaataatg aaattattac gcagtaccgc caacagtcag gttatcaact ttcagcgttg
     1141 gctggcccac gccaaccggc aaactttgcc cttctttacc gcagacacct acgccgttat
     1201 ccagtttcag gtcgttgcca accatcgaaa tctgctgcat ggtttcgata ccggaaccaa
     1261 tcaacgttgc gcctctcacc ggcttcgtta ctttaccgtt ttcaatcaga tatgcttctg
     1321 aagtggagaa aacgaatttg ccggaggtga tatccacctg accgccacca aagttcggtg
     1381 catagatacc gtactcaacg gattcaataa tttcctgcgg ggtcgattta cccggcagca
     1441 tataggtgtt ggtcatacgc ggcatgggca gatgggcgta ggattcacgg cgaccgttgc
     1501 cagtcggcgt catccccatc aaacgcgcgt tgagtttatc ctgcatgtag cctttcagaa
     1561 tgccgttctc aatcagcacg ttgtactggc ctggcgtacc ttcgtcatca atcgccaccg
     1621 aaccacggcg atcgaccatc gtgccgtcat caaccacggt acacagttct gaagccacca
     1681 gctccccgac ctgcccacta aatactgaag tgccgcggcg gttgaagtcg ccttccagac
     1741 cgtgacctac cgcttcatgc aacagcacgc ccggccaacc tgcgccaagt actaccggca
     1801 tggtgcccgc tggtgcagca acggcagaaa gattgaccag cgccatacgc actgcttctt
     1861 ttgcccatgc atccgcacgg acttcgccgt caagatcggc aaggaagaac tcataaccaa
     1921 aacgaccgcc accgccaccg gcaccgcgtt cgcgtttgcc atcttcttcg accagaacgc
     1981 tcacggaaag acgcaccagc ggacggacat ccgccgctag cgtgccgtcg gtggccgcaa
     2041 ccagaattaa ttcatagaca ccactgaggc tggcagtcac ttcctgtacg cgcttgtccg
     2101 cttcgcgagc aaccttatcg acgcgacgca ggatatccag cttctcttca cggctcatgc
     2161 tttgcagcgg atctaccgag gtatacaacg ggctatgccc taccgcgccc agcgtctgta
     2221 ctttgccatc accactatca cggacgatgg tgcgcgccgc ttgcgcactc tgttccagcg
     2281 ccagcaggct gatttggtca gcgtaagcaa atccggtttt ttcaccgctg attgcacgca
     2341 cgccaacgcc ctgatcgatg ttgtaagaac catctttaat aatgcggtct tctaaaaccc
     2401 aggattcgtg atagctcgac tgaaaataga gatcgccata atcaaggcga cgttcggcca
     2461 gttgaccgag gatcgcgaac aagtcctgat gtttcaggcc gttcgccgct agcaattgtt
     2521 cacttaccag gttaagagtc atcgtttttg ctactcgtta gttactgcag tagaggattt
     2581 tttacggctg ccggatgcgg cgtgaacgcc ctatccgacc tacggttatg ttctggctcg
     2641 ttggcctttg gcaacgatta tcatatgaga ttggggcaat tacgcgccct cgtcaaatca
     2701 ttgcgctttt tctttacgcg gttggcgcaa cacttcgttg atttgcggat cgtccagcgg
     2761 acccgaaatg tgatagcgca aaatggagac tttgctccac agcggcccca gcactttact
     2821 ggctgcaaat actgccgcgc caacaatggg gttaaccgca aaagccgcag ccacgcccac
     2881 cgtcgcagaa atctctggtg cgacaaccgc ttccatattc aggtcgcgac gtaccagatt
     2941 taccgaccct ttcatggcga tatccgcctc caggccatcc accagcgtgt cgtcggtgtg
     3001 cataacgccg tctttaatcc acgcggtgct gcgaatggag tcaaaataga acccttcgcc
     3061 aaaagtgtct ctgaaatcaa aacgcagctt acgcatcagg gcatcaacgc tcaataagcg
     3121 cagcaattgc ccggcatgtc cggtattgat ttcggtaatt tcgcctttac ccagttgagt
     3181 atgaatgatg ccattcaacg tcgcctcatc tggttgccag ggtgctttgc gccagtgtaa
     3241 atcgtaatcc acattaaatg acgactggcg tatgggcgtc gtgacaccaa aaaattctgc
     3301 ggcggcatca attttctgcc cgcgcagttt tcctttcagc gaggtacgtt cattccccgg
     3361 attattaacc cattcaccat cggcagtaag ccgcgagaaa ccagtatcaa tcagtccatt
     3421 ggtcagcgtt aacgtatcgc cagaaatggt gagatcactg tcaatacgac cgaatttttg
     3481 cccccagaac cagcactctg tgcatcgtat ttgtgcgtcc gaccagccac ggaagttaat
     3541 gcgctccgtt gtcgggaaag gtgatgacgg tgttgaatca ccacgagttt tcgccacgct
     3601 cgggttgtaa taaagatatt tgatattcgc cagccacggc gcgttattac gcatcgccag
     3661 cgtggcattg atttcacgcc cctgcgcctc aaccagggtg ccatttgccg tcggttgcga
     3721 aacaatactc aggttattcc attgctgatt tcccagtgac aacataggcg tacgtaacgt
     3781 tatgtgttgt gggaaactcg ctgcaccacc gacactctcc gcagcgcctt tctggaacag
     3841 ggccagccac tcggcaccat tcatcggcgg catattgagt tcaacgccac tttgttccgg
     3901 caacggcggg agcgttttac tgtctgccgc ccaaatagca cgatcgagcg tcagcttttg
     3961 accaagcaac cagcggctat tgaaatggtt atccgcacca gcctgtccgg ttaattcaaa
     4021 gctgctgaga ttgccatcaa ccttaacgtt taccggcagt ggttcacccg caggtttggc
     4081 taacggtgaa ggtaagtgac tgctcacatt attcagatcg ccgttcagct ctacgttata
     4141 ggtcgcgcca gcatgataag gcagatcaat gcccacttta ccatcccacg ccacgctgcc
     4201 actcaatgct tcgttcaccg ctgcaggcag aacgccggtt ttcgccggta gccagttacc
     4261 gttgaggttt accgcaacct ggtaggcttt tgccccttct ttggtggaaa aatccacgtt
     4321 caacggctga ttaaaccagc ttgctgtcag tggttcactt tgcagatcgc cattgataaa
     4381 gctgaattta ccgctcaaat ttttcagggt gctgtcgagt ggtttgataa acagactgtt
     4441 attacgcagc gtcacttcac ctttcgcggt taccagttcg ccgttcagcg ggatatcaag
     4501 atgtaagcga gcattcacat cgccgtcgag ctggagttct tgcagggtcg cacccagaga
     4561 atctttcagc ggtgtctcat caaagtaagg gccaacggct ttacccggac ctttaatgtc
     4621 agcgtcaatc agcagttttt ctttcgagta gtcagggatc actgcggtga gattactcgc
     4681 gcgcacgccg cccagattaa cgtcatcggt tttcatccat aaaccgtcgt taataaagtc
     4741 cagttcaata tcaaggttag ttaatgcagg ccagtccggc tggaaggcaa acttcgcgtt
     4801 acgcagcggc accagcactt caaactgacc ttcgttgtgt ttatagggga agagttgcgg
     4861 attgccacca taaaccagcg tcgcgttatc cgcttcaccg ccctgaatcg cgccacttaa
     4921 gtaatcaact aggtctttac ccatcaagtt ttccgggaaa tagcgccagg cttgtgaacc
     4981 atcatcggta ctgatgccag ccagaatacc cagccagggt tcatcgttag caggttgcag
     5041 gtaacgaaaa ccgccgcgcg catggacggc tttggcttta acgtcaatat tacgcccatc
     5101 cagctggaaa cctttgtcat tgttcagcca gcttatagtt gcctggccgt cggcgatttc
     5161 cagtggcgca cggaataccg tttcgtaagg catctttgcc tgcttcatcg acgcggtaag
     5221 caaaccattt tcaacgctgc cggaaagcgt cccggagaag tgttccgcac ccggtaataa
     5281 tttccattgc ttccaggcca gatcgctcca cgatgcctga aaacgggtct tgtctgccgc
     5341 ctgaagcggg atatccagcg ccagagtgtt aatcttgccg ctcggttgtg tggagcgcca
     5401 aacatcaccc agtgcaggtg aaagtttcgc ggccagcggg cgtatgccct ccaggcctgc
     5461 cagctccaga ttactggcgc gaatccggag ttcgtcactg cgtttattgt ctttgccgcc
     5521 aacgtcctgt tccggtatcc aggccagcgt caatgctccg ctcggccagg gtttgccgtc
     5581 catcgtgatc cgtgtatcgg gaatagagaa ctgccagccc ggattttcac gcgtaatatg
     5641 cgcggtcaga ttatccaccg acagcgtatg cgtttgcttc tcgcccaacc agctggcacc
     5701 gccctgtttc agccagacgt caccgccggt tacatcgcct ttgtcgatcg tcatccagcc
     5761 ttcaagggag aactgtgccg tttccagagc aatattgtcc tgcatccatt taccgagcca
     5821 cggcttcagg tcgatgtcat ccgcctgtag ccagacgcga ccattgctta acaacccctc
     5881 atcatcgcgc aaatccatgc gcacctgcat cacgccgtgc tgtccggtaa ggctggagag
     5941 gcttaccagg ccttccgcac ggtgtcgacg tggatcgttc agccaggtga gttgtgggat
     6001 cgccagctcg gcgcgctgac cggatggcgt cagaaaactg acttcactgt cgcggagatc
     6061 gaaatggtca aattgacgaa gaaacagatc gctgatgtga ctggcttcca ggctatcatt
     6121 accaccaccg ctggtgatag gagtgttggt gcgaaagcgc agctgccaga aagtgaggtc
     6181 gcgaaactgc cagcgcatat gtaacaagct ctgccagaca tccagcgcca gagtaacgcg
     6241 tttaaccgaa aattcgccgc catcttttag ttctgcacgg atgtcgtgtg cttcaagcgt
     6301 cgggccaaaa ttctgccagc tggctgagag ctgactggct tctaccggca tgccagtcgc
     6361 ggattctatt ttgttgagga tttccggacg ccaggcgtca agatgcggta aagcaatacg
     6421 caggccgcta accagcaggg ctgcgatcac aacgagcgcg gctccagtaa gcagtaaaat
     6481 ccccggcaat cgcctcaccc gtcactcctt gtctgctaaa aatgtgactc aaaaaccctt
     6541 tgccggatgg cggcccagca tctgtttaca tcattacgac gtcaaactgc tcctggttat
     6601 agagcggttc aatttgtact ttaacctgtt tgccaacgaa aatttccact tccgccagcg
     6661 agtgtgactc ttcgcctttc aaggcttcag ctactgccgg agaagcatag accaggaaac
     6721 ggtcggagtc gtaagcatgg tggacacgaa caatctcgcg catgatttca tagcataccg
     6781 tttccacggt tttcaccgtt ccgcgaccgt ggcaggttgg gcattcgtta cacagtacgt
     6841 gctcaatgct ttcgcgggtg cgtttacgcg tcatctccac cagccccagc gccgaaaaac
     6901 cattaacgct ggttttcacc cggtctttgc tcaacgcctg ctccagcgag tgcagcacgc
     6961 ggcggcggtg atcttcatta ttcatatcga tgaaatcaat aatgataatc ccacccagat
     7021 tacgcaaccg taactggcga gcgatagcct gcgtcgcttc aatattggta ttgaaaatgg
     7081 tgtcgtccag attgcgatga ccgacaaacg ctccggtatt gatgtccacg gtggtcatcg
     7141 cttcggtctg gtcgataatc agataaccac cggatttcag ttctactttg cgttccagcg
     7201 ctcgctggat ttcgttttcg acatcaaaga gatcgaaaat cggctggcgt ccggtgtaat
     7261 gctccagctt gctggtcatc tcgggaatgt actccgaggt aaactccagc aatgcttcgt
     7321 aagtcaggcg tgagtcaacg cgaatgcggt ccagttcggc gtcggcgaaa tcacgcagaa
     7381 cacgctgcgc cagcgccagt tcgccgtaca gctgataacg ggtctgcggg cgttttttac
     7441 gctccataac tttggtccag acgcgtttca gataagcggc atcggaggcc agttcagcct
     7501 cgccaacccc ttccgctgcg gtacggatga taaacccgcc ctgctcgtcg caatactctg
     7561 cgaccacttt tttcaggcgt tcacgttctg attcgctttc aatacgttgg gaaaccccaa
     7621 cgtgagaagc ccctggcata aacaccagat agcgagaagg cagcgtgata tcggtggtca
     7681 ggcgcgcacc tttagtgcca agcggatctt tcaccacctg caccatcaga tcttgcccct
     7741 gacgaaccag ttccgagatg tcgcgcaccg tgaattgctt ttgttcttca cccgccacac
     7801 attcggtgtg cggcatgata tcggatgcat gaagaaacgc ggctttatcc agcccaatat
     7861 ctacaaaagc cgcctgcata cccggaagta cacgacttac acgacccttg tagatattgc
     7921 ctactattcc gcgtcgcgcc tcacgttcaa tatgaatttc ctgcagaata ccgccatcaa
     7981 tatacgccac tcgcgtttcc gaaggcgtta cgtttactaa caattcagcc gtcatgttta
     8041 tcccttttct cacgcagtgc gttaaaatta cttaataatt catacgtttc aaccagcggt
     8101 aagccgacta cggcgtgata gctgccattt atcttcctga caaaacagcc acccagcccc
     8161 tgaataccgt atgcacctgc tttatctaac ggttcaccgc tggcgacata gcccgcgatg
     8221 tcttcgtctg ttaacgttct gaaagtcaca tcggtgacca ccaggcaatc gagaatgtgc
     8281 tggctgtcgg ccaacaccac tgccgtcatc acctgatggg tctgacccga taatttgcgc
     8341 aacatctgcg ccgcatgctc tgcgtcgcgc ggtttctcca gcacttctcc attcaggata
     8401 acgatagtat ccgcacccag caccgggaga tcctgcgccg tttgcgcgac acccgcctgt
     8461 gctttctcgc gtgccagacg cacaacatac tgctgcgcgc tctcctgcgg ctgacgctgc
     8521 tcctcaatgc ccgtaacaat acgttcaaag gtcacgccaa gttgcgcaag taactcctga
     8581 cgacgcggag aaccggaagc taaatacaga gaagtcatag aaacctttat tgcactgcaa
     8641 actgctgacg gactttacgc atcagcaaga aaatccacgg ccagagcacc ccattgacta
     8701 cactactcca gaacacttcc ggtctgaaag agacgttaat cactaaaaac tctgcccaga
     8761 aaacaataat atccaccacc agcgaaagca acatgacgac tagcgcctgc tgccataatg
     8821 cgaggttgcg gaaaagctgg tatttcagcg ccaccaggta agcaatgatg ctcatcgcca
     8881 atacgcgtac gccaagcgtc gagccgctga tcagatccag tatggcaccc atcacaaaac
     8941 ctgtgcccac atttacgcga tggggcaagg ccaggatcca atacaacaag ataagtaaca
     9001 cccagtttgg ccggaaaaca atcaggttat ccggccaggg catgatttgc agcaacagcg
     9061 caatgaggaa agagagccag attacccaac gtccctggct acgatagctc gccactattg
     9121 ccctcccggc gcacgcgcag gcggttgagc accactttgc ggcggcgtag ccctttgtgg
     9181 agagcgatta gcagcaggcg cagtagctgc atttcctgtc gtcggttgct gcggagtcgg
     9241 ctgagcgatc cccgttgccg gttcaggtaa ctttggcccc atcgcgtctg gcgaaggcaa
     9301 tacctgcggc atcatctgca tcagacgttc attagcaaca cgatgcacct cttccggcgt
     9361 catcgggtta gcgccgttac gatccgcgcc ccacagcagc agcagataac gcaaacgttg
     9421 cagtcctgca gtcggacgcg cctgaatcac agtataagcg cgctgggtat cgagttttac
     9481 ggaagagaca accgcgaccg gatagccttc cgggaaacga ccgcccagac cggaggtcac
     9541 cagcacatca ccaacacgaa tatccgtatt cgctggcaga tgctcaagct gcaaatcatc
     9601 cgtacaaccg ttaccggctg caattacgcg gatatcgttg cgcagcacct ggattggcag
     9661 cgcgtgggtc gcatcacaaa tcagcagcac gcgactggtc agtttagcga cggccaccac
     9721 ctgaccaaca acacctttgt cgctgatgac cggctggcct tcataaacgc cattaacgct
     9781 acctttatcg ataacaactt gatcgctata aggatcgtta accgtggaga taacctgagt
     9841 caccattttc tgctcatcct gacgcagcgg ggaacccagc agctcgcgca gacgcgcgtt
     9901 ctcctgtttg tattgtccaa gcatcagcag ttcactgttt ttcagcaaca gttcctgacg
     9961 taacgcccgg ttttcaagtt ctagttggtc acgcgaggcc agcgtctgcg atacgccatc
    10021 cagcaattca cgaggagcat tggaaacaaa gtagaaagga ctgacggcgg tatccatata
    10081 agtacggatt tgactgaacg tccccaggcg gctgtcggca ataataatgc cgagcgccac
    10141 cagcaccgcc agaataaggc gaatctgtag cgacgggcca cggctaaaaa ttggcttcat
    10201 aagttatgcg tattctcgta tcagaccagg cagggtaaac agacatttcc cctgcctgca
    10261 tccgattact cttcgctgaa caggtcgccg ccgtgcatgt cgatcatttc cagcgctttg
    10321 ccgccaccgc gcgccacaca ggtcagcggg tcttcagcaa caacgactgg aatgccggtt
    10381 tcttccatta acaaacggtc aaggttacgc agcagtgcgc caccaccggt gagcaccatg
    10441 ccgcgctcgg agatgtcgga agccagttcc ggcgggcact gttccagtgc aaccattacc
    10501 gcgctcacaa taccggtcag cggttcctgc agtgcttcga ggatttcgtt ggagttcagg
    10561 gtaaaaccgc gtggaacacc ttctgccagg ttacggccac gaacttcgat ttcacggact
    10621 tcatcgcccg ggtaagccga accgatttcg tgcttgatac gttctgcagt ggcttcaccg
    10681 atcagagaac cgtaattacg acgcacatag ttgatgatag cttcgtcgaa acgatcacca
    10741 ccaatgcgca cggaagagga gtaaaccacg ccgttcaagg agataacagc aacttcagtg
    10801 gtaccaccac cgatatcaac caccatagaa ccggtcgctt cagaaaccgg caggccagca
    10861 ccaattgcgg cagccatcgg ttcttcaatc aggaagactt cacgggcacc agcgccctgc
    10921 gcggattcac gaattgcgcg gcgttcaacc tgggtcgcgc caaccggtac acaaaccaga
    10981 acgcgcgggc ttggacgcat aaagctgttg ctgtgcactt gtttgatgaa gtgctggagc
    11041 attttttcag tcacgaagaa gtcggcgata acgccgtctt tcattgggcg aatggcagca
    11101 atattgcccg gcgtacggcc cagcatctgc ttcgcgtcat gacctactgc agctacgctt
    11161 ttcggtgaac cggcacgatc ctgacgaatg gccaccacgg aaggctcatt caatacgatg
    11221 ccttgtcctt ttacataaat gagggtattc gcagtaccca ggtcaatgga caagtcattg
    11281 gaaaacatgc cacgaaattt tttcaacata ctaagggata atcctgaaag ctggggcgga
    11341 aaagaaaatc cgcttacttt accaaccaca cgcagcagcg acaaggcgca aaaatcatct
    11401 gctacggtga aaattagtgc agttcgtttc ctttgttaca aatctctgcc tgagtccaga
    11461 aaggcttaat gcatcagcag cattcctcgc ctgtttgcaa ccgcgtaagg tcattcatct
    11521 gcatatgtgc tgcaacaatc tggcgagcag acaagcacac tcccatgaga cgcagcgcgc
    11581 gttattctac gtgaaaacgg attaaacggc aggttaaacc gagtatcttt gtgaatattt
    11641 tttcacgtta gtatcaagtg gctgtgagga cgcgaaaaaa tccccttgcc cgcctgtaac
    11701 accgcgctga atcagggtct gccactcgct tcgcgaacgc acaccggtgg cgtaaacctg
    11761 ggtgctggtc ccggagcagg cttccaccag gctttgaacc agcagctggt tctccgttcg
    11821 cttctcaatg tttctgacca gccccggatg gagcttgagt aactcaacat taagttcttt
    11881 gatccaactg gtgcttacca gcgtcaaacc agcctggttg acggctaccc gtacccctaa
    11941 agcattcact aaacgaataa caggttgtaa acgactgata tgttgaccta catcggcctc
    12001 tgcaagttca ataattatgc gttttcgttg tgatttttca cattgcatta acgtatcgcg
    12061 cagccaacgc tgaaaacgcg ggcgaatcag cgactcaacg gtaacctgaa tcgccagatt
    12121 ttcctctggc cagtaccgca atagtggaat aagacggctg atttgcagac ggtcatactc
    12181 ttccgataag ccaaactgca agaccatcgg catatactcc gccgagctaa cctcttcatt
    12241 accatcgaag atgcggcaca tgagttcgcg atgatgaacc tgaccttcgc gagtaaccgc
    12301 cggtttttga taaaggcgcg ggccgccgcg actgagcatt tgctcgataa gcgtacgcca
    12361 gcgaacatta ccgcgtcctt tttcaggcaa cgagtcatcg taaatagccc agctattgcc
    12421 gccctgcaat cccgcattac gcgtggcaga ctctgcatgt tccattacct gctcggtatc
    12481 ctgaccacta cgccaggcgc agataccaat gtggatcata tcgtcgcgat cgagcatttt
    12541 attgttcggc aaggtatcga cggctttgat taactgaccg gcgatgctct ctgcctcttt
    12601 taacgtccgg tgcggtaaca gcgcagcaaa atcactgcgg tggtaacgcg ccagcagtgc
    12661 gccagggtag cgcatcataa atgtcgacag cagattcgtc agagtgaaga actgttcttc
    12721 aacctggctg tgcccccaag tatcgctcaa catattgaaa tccggcagac gaatcatcat
    12781 cacgatcccg tgggtaccta ctttctcctg atcttccagt aacgttgcta actgattatc
    12841 gaaaaagagt cggttattga ggccggtttt cacgtcctgg gcggcataag agcggatcag
    12901 cgtatcaaga cggctgtgtt gttcgcgtgc gttctgaatt tcacgaagca gcgtatccag
    12961 cgcactgctg gttctgggcg gccattcata gatggttccc aacacattag agccacgctc
    13021 accgtttaag atacgagtag cccgggtttc cagcaattct tgcccggcaa gttgccgttg
    13081 taaccagcgt accgccaaga aaagcataac aatgataaag ctaatcgccc ccgtgagcgg
    13141 cgcggtggtc atcaacgaat ggaaatagtt gcccatcgga tcctgataaa ccagacgcag
    13201 cgacatcccc ggatgcttta tcaacggaac gctcagttca cgaaacagat cgctggagcc
    13261 aaccggacga taactaccat ttctggccag ggtataaacc tgtttatcac catggagcag
    13321 gcctacacga acgatatctg ccgacatcat taattcggta atttgtggcc ttaatgtgct
    13381 gaagtcattc gacacaaggt gggtatcaat cgccgtcgcc accgcctgaa cgcgatgact
    13441 aaacttatac tgaattgcgt tgtagaaact tagcgaacag cccagcaaag tcacaaaaat
    13501 tgttaacccg gtgagcagcg taacaaaggc cgaaaatttc gtcgttaatc tcatccttgt
    13561 gttaactccg atagtgagga agcgggcata ctagcaaatc agatttatct cgcaatttat
    13621 tgcgcttcat cggctttgct tttccattag cgagtataat cttcagaaat tattttccaa
    13681 tccatcatgc acatgaggac cacttatgca ggcgttactt ttagaacagc aggacggcaa
    13741 aactctcgca tcagtacaga ctctggacga aagtcgcctg ccggagggcg atgtcacggt
    13801 cgatgttcac tggtcgagcc tgaactataa agatgcgctg gcgattaccg gtaagggaaa
    13861 aatcatccgt aattttccga tgattcctgg gatcgatttt gccggaactg tacgcaccag
    13921 cgaagatccg cgttttcatg ccggtcagga ggtgttactc actggctggg gcgttggtga
    13981 aaaccactgg ggtgggctgg cggagcaggc gcgagtgaaa ggtgactggc tggttgccat
    14041 gccgcaaggg ctggacgcgc gtaaagcaat aattatcggt actgccggtt ttaccgccat
    14101 gctgtgtgtg atggcgctgg aagatgccgg tgttcgcccg caggacgggg agattgtcgt
    14161 gacgggtgcc agtggtggcg tcggcagtac cgccgtggcg ctgctgcata agttgggtta
    14221 tcaggtcgtt gccgtttccg gtcgcgaaag tacccatgaa tatctgaaaa gtttaggtgc
    14281 cagccgtatt ctccctcgtg atgagtttgc cgaatcccgt cctctggaaa aacaagtctg
    14341 ggctggggca attgacactg ttggcgacaa agtgctggca aaagtgctgg cgcaaatgaa
    14401 ttacggcggc tgcgtggcgg cctgtggtct ggcgggtggt tttactctgc caaccacggt
    14461 catgccattt attctgcgta atgtccgttt gcaaggggtg gattcagtaa tgacgccacc
    14521 agaacgccgc gcacaagcct ggcagcgact ggtcgccgat ttaccggaat cattctatac
    14581 ccaggcggca aaagagatat ctctgtcaga ggcaccgaac tttgccgagg ccatcattaa
    14641 taaccagatc cagggtcgca cgctggtgaa ggttaactaa ccatttagca aggaataata
    14701 agagagggaa ctcattttga catcattatt caatcggtta acgggaaaag cggttagccg
    14761 gacagctttc gtcgaacacc ttggtcagga agttgtacaa catcatccaa actggaaagt
    14821 catgatttcg actgaccaca aattgatgcg cattgatact cctctaaaca gccattattg
    14881 atacgcctcc gtcgcctgtt aggtttatgg tgctttgcct gggcgacact acgcttaacc
    14941 tgttactgat ttctggtacc atggggtgaa taatctgatt ttgtttgact gcaaattaac
    15001 cactcgaacc tatttaatgc tgagaattgt cagtcggttg attttgcgtg ctttagcatt
    15061 cacatctatc cagacgatgc agtgaaaatt gggtaatccc cagcaaccgc tgcgtaatgt
    15121 cgtctatctt gtcgcgatcc tggcatccct acattatttg tggtctgtga agattatctc
    15181 attgcagccc ctcatcttcg cagggctggc tttacagctt ttcaccttac gttataagaa
    15241 gttccgtcga tgatggcgct aatttcgtga attgtgcggc ttgttgcaaa ttacacggtg
    15301 ttgaaggtta tttacatgtt agctgttgat tatcttccct gataagacca gtatttagct
    15361 gccaattgct acgaaatcgt tataatgtgc gacctcgtcc tccctgacgc agtttttgcg
    15421 ctgcggaaaa ggtgacattg gcgcaacgaa ggtatatttt gttttttgcc ggaggatagc
    15481 agcagatcgc tgcacaatgt ccgtcaagtc taacattgat actctggggc aaaatagacc
    15541 ggcgtcccgg cctgctggaa tttatcgcta tgcatacagc tgtcggggca tacgctttac
    15601 agacggcggt gaaacgcctg tcacaatcac actaaacaaa gagtacggaa cccactcatg
    15661 gatattcgta agattaaaaa actgatcgag ctggttgaag aatcaggcat ctccgaactg
    15721 gaaatttctg aaggcgaaga gtcagtacgc attagccgtg cagctcctgc cgcaagtttc
    15781 cctgtgatgc aacaagctta cgctgcacca atgatgcagc agccagctca atctaacgca
    15841 gccgctccgg cgaccgttcc ttccatggaa gcgccagcag cagcggaaat cagtggtcac
    15901 atcgtacgct ccccgatggt tggtactttc taccgcaccc caagcccgga cgcaaaagcg
    15961 ttcatcgaag tgggtcagaa agtcaacgtg ggcgataccc tgtgcatcgt tgaagccatg
    16021 aaaatgatga accagatcga agcggacaaa tccggtaccg tgaaagcaat tctggtcgaa
    16081 agtggacaac cggtagaatt tgacgagccg ctggtcgtca tcgagtaacg aggcgaacat
    16141 gctggataaa attgttattg ccaaccgcgg cgagattgca ttgcgtattc ttcgtgcctg
    16201 taaagaactg ggcatcaaga ctgtcgctgt gcactccagc gcggatcgcg atctaaaaca
    16261 cgtattactg gcagatgaaa cggtctgtat tggccctgct ccgtcagtaa aaagttatct
    16321 gaacatcccg gcaatcatca gcgccgctga aatcaccggc gcagtagcaa tccatccggg
    16381 ttacggcttc ctctccgaga acgccaactt tgccgagcag gttgaacgct ccggctttat
    16441 cttcattggc ccgaaagcag aaaccattcg cctgatgggc gacaaagtat ccgcaatcgc
    16501 ggcgatgaaa aaagcgggcg tcccttgcgt accgggttct gacggcccgc tgggcgacga
    16561 tatggataaa aaccgtgcca ttgctaaacg cattggttat ccggtgatta tcaaagcctc
    16621 cggcggcggc ggtggtcgcg gtatgcgcgt agtgcgcggc gacgctgaac tggcacaatc
    16681 catctccatg acccgtgcgg aagcgaaagc tgctttcagc aacgatatgg tttacatgga
    16741 gaaatacctg gaaaatcctc gccacgtcga gattcaggta ctggctgacg gtcagggcaa
    16801 cgctatctat ctggcggaac gtgactgctc catgcagcgc cgccaccaga aagtggtcga
    16861 agaagcacca gcaccgggca ttaccccgga actacgtcgc tacatcggcg aacgttgcgc
    16921 taaagcgtgt gttgatatcg gctatcgcgg tgcaggtact ttcgagttcc tgttcgaaaa
    16981 cggcgagttc tatttcatcg aaatgaacac ccgtattcag gtagaacacc cggttacaga
    17041 aatgatcacc ggcgttgacc tgatcaaaga acagctgcgt atcgctgccg gtcaaccgct
    17101 gtcgatcaag caagaagaag ttcacgttcg cggccatgcg gtggaatgtc gtatcaacgc
    17161 cgaagatccg aacaccttcc tgccaagccc aggcaaaatc acccgtttcc acgcacctgg
    17221 cggttttgga gtgcgttggg agtctcatat ctacgcgggc tacaccgtac cgccgtacta
    17281 tgactcaatg atcggtaagc tgatttgcta cggtgaaaac cgtgacgtgg cgattgctcg
    17341 catgaagaat gcgctgcagg agctgatcat cgacggtatc aaaaccaacg ttgatctgca
    17401 gatccgcatc atgaatgacg agaacttcca gcatggtggc actaacatcc actatctgga
    17461 gaaaaaactc ggtcttcagg aaaaataatt tgtgacgcgc ggtgttttca tcgcgcttag
    17521 caaagaacgt aatcaacgcc gggcctgtta acgctgcccg gcgtttttat tgccgttagc
    17581 taacggtagc ctgcaatttc cgctttcaac gcgctcattt cagcatcgcc atcaacaatt
    17641 cccagctcaa agcagtattt ctttgtttcc cctggctcaa taaagggcag acgcccctgc
    17701 gctcgttctt tatcacgacc gtcaggaaaa ctattactga cctccagtcc cataacatac
    17761 tcacccgcgc ctaaattttt ccactggata aagttgggta gctgcatggt gtcgaatttc
    17821 tcgtaaattc cccaccccag ttcggcgttc accagagcaa ctttactcat cccctgactg
    17881 tcgctattca acgtgagata gtaaacctgc tcgtcaaaac cgggctgtgg ggtacaaatc
    17941 tccagatgac tggttaaccc ttccgccgca tgcggagttc gtggcgttac gcttttagcc
    18001 gacagcaaga tttctggcct gtggcgataa taaaggccag ccgtaattaa agtgataaag
    18061 aatttgcagc ggctggcggg tgaaaccatg attagtcacc ttgtcttcaa tgcgcagcac
    18121 attttcgcca taacggcagc gaatggtcct ttccagcgtc agattttcgc cgaacagtcg
    18181 cgtttcccgt actttgccat tgatgacaaa ttcaatgccg tcgtcggtcc gttctgtgcg
    18241 ataccccacc tcttctgctg gagtcgcagc caaacgcccg tgtaacccca gcgtttctcc
    18301 ttcatcctca caaggcgtgc caatgtagct aagtccgcag gtagtcagta accccgcgta
    18361 aaagctacgt aaaaatccgt tgccctgaga ctcaaaaaaa gcgggggcga caatgccgtt
    18421 gggggtgata aaagaaagcg ccgtgtcctt gtagctggcc catgcaatat ccagcgcgcg
    18481 atcttttacc accgtaaatg ccagtcccgc accagtacgg acatcaaacg cttctgtacc
    18541 ctttgctctg ccactacgta actcatagtg tttaattccg gcaacctgcg agagatcgcc
    18601 aatccacgac caaatttcgt ttttcattgt gctgcttccc gaatggacat gtcatggcgc
    18661 tggatgaacg cttcgatttc cgcaaggcga gacgttccct ccattgggcc acgtctggtt
    18721 accgccagcg caccgcaggc attggcatat tgcagcgctc gatggacgtc aaaccctagc
    18781 tggcggcagg caatccacgc gccaccaaag cagtctcccg caccggtcgg gtcaacttct
    18841 tccaccggat agctctcaac atgaaactgc tcattcgcgg agtagtaact ggcaccttga
    18901 ttgccgcgct tcacaatcac ctctttaaca ccttcttcaa gaaaacctgc gattgcacgc
    18961 tccggcgtcg aatgtggcga caagagcaac acttcgccct cgctgggcat atagatatcc
    19021 gttaactcaa gaacaaagtg gagggcgtca cgcatttctg gaatatcgag catctcttta
    19081 cgaatattag ggtcgaaaga aataacacca ccatttgctt taacgatagt taccgctttt
    19141 tttactgcgt ctaccatatg aaacgaaaac agggaagagc ccataatatg aaaatgggta
    19201 cagtccttca gaatattttc atcaacatgc tgcgccgata atttaccgca agcggcattc
    19261 ttaatattaa aaataaaatc gcgatcgcca gagttatgat aagtaacaaa ggcactcccg
    19321 gtagcttcca gaggtaagac tgaaatcccc ctgatatcca caccgtcagc agccagacga
    19381 tgtatattaa tatcaccaaa gccatcattc cccacacagc taatgatgcc gcacggaacg
    19441 ccaagacgtg tcacctggtc gataaaaata gcgggcgcac cactgggata agggccgttc
    19501 cagatacctg gttgatcaaa tggctggccg attttactcg ccataatttc aaccagaatt
    19561 tctccaattg tgaagacctt actcatatga ttaattcctt gaaatgatta gctgcgtttt
    19621 cttttatttc ttacgtcaaa ataaacggct acaagaatga ctaatccttt aaccaccatc
    19681 tggtaaaaat agggaacatt cattaagttc atgccattat taataacgcc gatagttaat
    19741 gcgccgatca ccgtccccac cacggttcca tagccgccgt tcaggctggt gcctcccagt
    19801 acagccgcag caatagcatc cagttcgtag ctcaacgcgg aattcggtta cccggaatag
    19861 aggcgtgagg cgaggatcat cccgctgata cctgccagca cggctgtaat cataaagact
    19921 ttaattttca agcgggtgac atttacccct gaataaattg ccgcttcttt attaccacca
    19981 gtgatataaa tttttcgtcc aaaggttgtt ttagtaagaa tgaagtggtt aatcagcaat
    20041 aagatgatta atatccagat tggaataggt atatagagaa attctccatt ccccagtgcc
    20101 agaaaggcat catctttaat catgatgggc ataccatcgg tcactatata agcgatacca
    20161 cggaagatcc ccatagtagc aacggtgaca ataaacgacg ggatccccgc tatagccgtc
    20221 aagccaccat ttatcatccc cagagccagt gctgcaataa tggataatgg gaccaataac
    20281 ataaatggaa ttccccatga agccccaagc gcagcaaatg tgccaatcaa tgcaatggtt
    20341 gaaccgaccg ataaatcaat atcgccaagc aaaagtacat aagtcattcc ataggcggta
    20401 attgcaatta tcgaaacctg aagaataata ttagtaatgt tgttggcggt aaaaaaactg
    20461 tcattaataa aactgaacag aatgattaac accaccattc cactgaggat accgccatat
    20521 tgcctgaaga cttttttaaa attatttgca atgggaattt ccgaaggttt cggactggca
    20581 agagttttct ctgtcattta acgtactcct gttgcagcgg tcattacctg tgtctgcgtt
    20641 aaattttcac atgaataaat atcggcaatc gttttattac gcattaccac cagacgatcg
    20701 ctaagtgcca tgacttctgg cagttcagag gacaccagaa taattgctgt ccctgccgca
    20761 gccagttgac gtatcacgtt atagatttca aattttgcgc cgacatccac tccgcgcgtt
    20821 ggctcatcga gcaataaaat acgcggagtt ttctccagcc acttcgataa cacgattttc
    20881 tgttgattac cgccgctcag cgctcccact gcctgatgta cagaactcac tttagtgttc
    20941 attctggcaa ttgattgcag cgtcttcgcc tcttcttgtc ggtgattgat gagtcccatc
    21001 cgcgaagcgt tatattgaaa cgccacatgg tgcgtgttca tattgacgtc gtgcatcagc
    21061 actaaccctt cttccttgcg gttttcggtc acaaaagcaa tgccatgatc aatagcctgt
    21121 ttaggattag tgatcctgac ttccttacca tcaatcaaca ca
//
LOCUS       DADMHC010000058        20746 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.058, whole genome shotgun sequence.
ACCESSION   DADMHC010000058 DADMHC010000000
VERSION     DADMHC010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20746
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.058"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(60..1472)
                     /gene="ftsP"
                     /locus_tag="JNZ57_001770"
     CDS             complement(60..1472)
                     /gene="ftsP"
                     /locus_tag="JNZ57_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsP"
                     /protein_id="HAY8828011.1"
                     /translation="MSLSRRQFIQASGIALCAGAVPLKASAAGQQQPLPVPPLLESRR
                     GQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMT
                     VAGLQVPGPLMGGPARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGM
                     WLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ
                     SPYVEVSRGWVRLRLLNASNSRRYQLQMSDGRPLHVISGDQGFLPAPVSVKQLSLAPG
                     ERREILVDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTD
                     SLPMRLLPTEIMAGSPIRSRDISLGDDPGINGQLWDVNRIDVTAQQGTWERWTVRADE
                     PQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWVDGQVELLVYFGQPSWAHFPFYFNS
                     QTLEMADRGSIGQLLVNPVP"
     gene            complement(1547..2284)
                     /gene="plsC"
                     /locus_tag="JNZ57_001771"
                     /gene_synonym="parF"
     CDS             complement(1547..2284)
                     /gene="plsC"
                     /locus_tag="JNZ57_001771"
                     /gene_synonym="parF"
                     /EC_number="2.3.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acylglycerol-3-phosphate O-acyltransferase"
                     /protein_id="HAY8828012.1"
                     /translation="MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGR
                     LAPLFGLKVECRKPADAESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIP
                     FFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFK
                     TGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELA
                     AHCRSIMEQKIAELDKEVAEREAAGKV"
     gene            complement(2517..4775)
                     /gene="parC"
                     /locus_tag="JNZ57_001772"
     CDS             complement(2517..4775)
                     /gene="parC"
                     /locus_tag="JNZ57_001772"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001639862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HAY8828013.1"
                     /translation="MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRR
                     IVYAMSELGLNASAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDG
                     QGNWGAPDDPKSFAAMRYTESRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPAR
                     LPNILLNGTTGIAVGMATDIPPHNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTE
                     AEIITSRAEIRKIYENGRGSVRMRAVWKKEDGAVVISALPHQVSGARVLEQIAAQMRN
                     KKLPMVDDLRDESDHENPTRLVIVPRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGL
                     DGRPAVKNLLEILSEWLVFRRDTVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIEI
                     IRNEDEPKPALMSRFGLTETQAEAILELKLRHLAKLEEMKIRGEQSELEKERDQLQGI
                     LVSERKMNNLLKKELQADAQAYGDDRRSPLQEREEAKAMSEHDMLPSEPVTIVLSQMG
                     WVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQ
                     GEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITL
                     PENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLPQLSKGKGNKIINIPSAEAARG
                     EDGLAQLYILPPQSTLTIHVGKRKIKLRPEELQKVTGERGRRGTLMRGLQRIDRVEID
                     SPRRASSGDSEE"
     gene            complement(5321..5803)
                     /locus_tag="JNZ57_001773"
     CDS             complement(5321..5803)
                     /locus_tag="JNZ57_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HAY8828014.1"
                     /translation="MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKET
                     GLSPVNQSQTFGVAWDDPATTAPKAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVA
                     RHVGELDDISHTVWGIIRHWLPASGEKMRKAPILFHYTNLAEGMTEQRLETDVYVPLA
                     "
     gene            complement(5856..6248)
                     /gene="ygiW"
                     /locus_tag="JNZ57_001774"
     CDS             complement(5856..6248)
                     /gene="ygiW"
                     /locus_tag="JNZ57_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB fold stress tolerance protein YgiW"
                     /protein_id="HAY8828015.1"
                     /translation="MKKFAAVIAVMALCSAPVMAAEQGGFSGPSATQSQAGGFQGPNG
                     SVTTVESAKSLRDDTWVTLRGNIVERISDDLYVFKDASGTINVDIDHKRWNGVTVTPK
                     DTVEIQGEVDKDWNSVEIDVKQIRKVNP"
     gene            6400..7059
                     /gene="qseB"
                     /locus_tag="JNZ57_001775"
     CDS             6400..7059
                     /gene="qseB"
                     /locus_tag="JNZ57_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator QseB"
                     /protein_id="HAY8828016.1"
                     /translation="MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAP
                     YDAVILDLTLPGMDGRDILREWREKGQREPVLILTARDALAERVEGLRQGADDYLCKP
                     FALIEVAARLEALMRRTNGQASNELRHGNVMLDPGKRIATLAGEPLTLKPKEFALLEL
                     LMRNAGRVLPRKLIEEKLYTWDEEVTSNAVEVHVHHLRRKLGSDFIRTVHGIGYTLGE
                     K"
     gene            7056..8405
                     /gene="qseC"
                     /locus_tag="JNZ57_001776"
     CDS             7056..8405
                     /gene="qseC"
                     /locus_tag="JNZ57_001776"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     QseC"
                     /protein_id="HAY8828017.1"
                     /translation="MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELF
                     DTQLMLFAKRLSTLDLNEINAADRMAQTPNKLKHGHVDDDALTFAIFTHDGRMVLNDG
                     DNGEDIPYSYQREGFADGQLVGEDDPWRFVWMTSPDGKYRIVVGQEWEYREDMALAIV
                     AGQLIPWLVALPIMLIIMMVLLGRELAPLNKLALALRMRDPDSEKPLNATGVPSEVRP
                     LVESLNQLFARTHAMMVRERRFTSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKAL
                     LQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKID
                     VRLTLNVQGIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVVDVTLNADNFIVRDNGPGV
                     TPEALARIGERFYRPPGQTATGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSW"
     gene            8515..9096
                     /gene="mdaB"
                     /locus_tag="JNZ57_001777"
     CDS             8515..9096
                     /gene="mdaB"
                     /locus_tag="JNZ57_001777"
                     /EC_number="1.6.5.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone oxidoreductase MdaB"
                     /protein_id="HAY8828018.1"
                     /translation="MSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRA
                     DSDYDVKAEVQNFLWADVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRK
                     DPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGM
                     EPLPTFIANDVIKMPDVPRYTEEYRKHLVEIFG"
     gene            9127..9441
                     /locus_tag="JNZ57_001778"
     CDS             9127..9441
                     /locus_tag="JNZ57_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HAY8828019.1"
                     /translation="MLTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMV
                     DCAAGVSFQSMAPDSIVMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLEMNIRILQP
                     GI"
     gene            complement(9489..11381)
                     /gene="parE"
                     /locus_tag="JNZ57_001779"
     CDS             complement(9489..11381)
                     /gene="parE"
                     /locus_tag="JNZ57_001779"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HAY8828020.1"
                     /translation="MTQTYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSV
                     DEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSN
                     KNYQFSGGLHGVGISVVNALSKRVEVNVRRDGQIYNIAFENGEKVQDLQVVGTCGKRN
                     TGTSVHFWPDETFFDSPRFSVSRLTHVLKAKAVLCPGVEITFKDEINNTEQRWCYQDG
                     LNDYLAEAVNGLPTLPEKPFIGNFAGDTEAVDWALLWLPEGGELLTESYVNLIPTMQG
                     GTHVNGLRQGLLDAMREFCEYRNILPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTK
                     ERLSSRQCAAFVSGVVKDAFILWLNQNVQAAELLAEMAISSAQRRMRAAKKVVRKKLT
                     SGPALPGKLADCTAQDLNRTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEV
                     SSDEVLASQEVHDISVAIGIDPDSDDLSQLRYGKICILADADSDGLHIATLLCALFVK
                     HFRALVKHGHVYVALPPLYRIDLGKEVYYALTEEEKEGVLEQLKRKKGKPNVQRFKGL
                     GEMNPMQLRETTLDPNTRRLVQLTIDDEDDQRTDAMMDMLLAKKRSEDRRNWLQEKGD
                     MAEIEV"
     gene            complement(11410..11991)
                     /gene="yqiA"
                     /locus_tag="JNZ57_001780"
     CDS             complement(11410..11991)
                     /gene="yqiA"
                     /locus_tag="JNZ57_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase YqiA"
                     /protein_id="HAY8828021.1"
                     /translation="MSTLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYP
                     SDAAELLESIVLEHGGDSLGIVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDY
                     LGQNENPYTGQQYVLESRHIYDLKVMQIDSLEAPDLIWLLQQTGDEVLDYRQAVAYYA
                     FCRQTVIEGGNHAFTGFEDYFNPIVDFLGLHHL"
     gene            complement(11991..12818)
                     /gene="cpdA"
                     /locus_tag="JNZ57_001781"
     CDS             complement(11991..12818)
                     /gene="cpdA"
                     /locus_tag="JNZ57_001781"
                     /EC_number="3.1.4.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3',5'-cyclic-AMP phosphodiesterase"
                     /protein_id="HAY8828022.1"
                     /translation="MESLLTLPLAGEARVRILQITDTHLFAQKHEALLGVNTWESYQA
                     VLEAIRPHQHEFDLIVATGDLAQDQSSAAYQHFAEGIASFRAPCVWLPGNHDFQPAMY
                     SALQDAGISPAKRVFIGEQWQILLLDSQVFGVPHGELSEFQLEWLERKLADAPERHTL
                     LLLHHHPLPAGCSWLDQHSLRNAGELDTVLAKFPHVKYLLCGHIHQELDLDWNGRRLL
                     ATPSTCVQFKPHCSNFTLDTIAPGWRTLELHADGTLTTEVHRLADTRFQPDTASEGY"
     gene            complement(12843..13265)
                     /locus_tag="JNZ57_001782"
     CDS             complement(12843..13265)
                     /locus_tag="JNZ57_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1249 family protein"
                     /protein_id="HAY8828023.1"
                     /translation="MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQ
                     YRLTIVESTRYTTLVTIEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARY
                     DYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY"
     gene            complement(13266..13895)
                     /gene="nudF"
                     /locus_tag="JNZ57_001783"
     CDS             complement(13266..13895)
                     /gene="nudF"
                     /locus_tag="JNZ57_001783"
                     /EC_number="3.6.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribose diphosphatase"
                     /protein_id="HAY8828024.1"
                     /translation="MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQ
                     MSHEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEG
                     ESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLA
                     DENEDIRVHVVSREQAYQWVEEGKIDNAASLIALQWLQLHHQALKNEWA"
     gene            14100..15581
                     /gene="tolC"
                     /locus_tag="JNZ57_001784"
     CDS             14100..15581
                     /gene="tolC"
                     /locus_tag="JNZ57_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane channel protein TolC"
                     /protein_id="HAY8828025.1"
                     /translation="MKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAA
                     DRDAAFEKINEARSPLLPQLGLGADYTYSNGYRDANGINSNATSASLQLAQSIFDMSK
                     WRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLD
                     QTTQRFNVGLVAITDVQNARAQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAAL
                     NVENFKTDKPQPVNALLKEAEKRNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTAST
                     GISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGA
                     SEQLESAHRSIVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIV
                     DVLDATTTLYNAKQELANARYNYLINQLNIKSALGTLNEQDLLALNNALSKPVSTNPE
                     NVAPQTPEQNAIADGYAPDSPAPVVQQTSARTTTSNGHNPFRN"
     gene            15729..16400
                     /locus_tag="JNZ57_001785"
     CDS             15729..16400
                     /locus_tag="JNZ57_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417509.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 family protein"
                     /protein_id="HAY8828026.1"
                     /translation="MKRTKSIRHASFRKNWSARHLTPVALAVATVFMLASCEKSDETV
                     SLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPA
                     QAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKY
                     TDATGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRSATGTSS
                     RSMGG"
     gene            16406..17566
                     /locus_tag="JNZ57_001786"
     CDS             16406..17566
                     /locus_tag="JNZ57_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HAY8828027.1"
                     /translation="MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQ
                     VEKLEEVTAELHQMCLKVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLD
                     LAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLID
                     RFVELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCATEAEIATEFLYIDDIGLGEKGQ
                     FTDLQDQVISNLFKLYPWEFMLREMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEM
                     FPNHPNLLPAYFAEDDHPQMEKYVVKPIFSREGANVSIIENGKTIEAAEGPYGEEGMI
                     VQQFHPLPKFGDSYMLIGSWLVNDQPAGIGIREDRALITQDMSRFYPHIFVE"
     gene            complement(17604..18419)
                     /gene="ygiD"
                     /locus_tag="JNZ57_001787"
     CDS             complement(17604..18419)
                     /gene="ygiD"
                     /locus_tag="JNZ57_001787"
                     /EC_number="1.13.11.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311954.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,5-DOPA dioxygenase extradiol"
                     /protein_id="HAY8828028.1"
                     /translation="MTPLVKDIIMSSTRMPALFLGHGSPMNVLEDNLYTRSWQKLGMT
                     LPRPQAIVVVSAHWFTRGTGVTAMETPPTIHDFGGFPQALYDTHYPAPGSPVLAQHLV
                     ELLAPVPVTLDKEAWGFDHGSWGVLIKMYPDADIPMVQLSIDSSKPAAWHFEMGRKLA
                     ALRDEGIMLVASGNVVHNLRTVKWHGDSSSYPWAMSFNEYVKANLTWQGAVEQHPLVN
                     YLDHEGGALSNPTPEHYLPLLYVLGAWDGQEPITIPVDGIEMGSLSMLSVQIG"
     gene            18535..19296
                     /gene="zupT"
                     /locus_tag="JNZ57_001788"
     CDS             18535..19296
                     /gene="zupT"
                     /locus_tag="JNZ57_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HAY8828029.1"
                     /translation="MSVPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIM
                     LLISLMEMLPAALAAEGMSPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQPLP
                     KSIKRTAILLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPV
                     YAATGSKRTAILWAGISGLAEILGGVLAWLILGSMISPVVMAAVAGIMVALSVDELMP
                     LAKEIDPNNNPSYGVLCGMSVMGFSLVLLQTAGIG"
     gene            complement(19354..19524)
                     /locus_tag="JNZ57_001789"
     CDS             complement(19354..19524)
                     /locus_tag="JNZ57_001789"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828030.1"
                     /translation="MFIAWYWIVLIALVVVGYFLHLKRYCRAFRQDRDALLEARNKYL
                     NSTREETAEKVE"
     gene            complement(19785..20438)
                     /gene="ribB"
                     /locus_tag="JNZ57_001790"
     CDS             complement(19785..20438)
                     /gene="ribB"
                     /locus_tag="JNZ57_001790"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001077009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HAY8828031.1"
                     /translation="MNQTLLSSFGTPFERVENALAALREGRGVMVLDDEDRENEGDMI
                     FPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVENNTSAYGTGFTVTIEAA
                     EGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDL
                     MTLAGFKPAGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHERKAS"
     regulatory      complement(20542..20690)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
BASE COUNT         5067 a         5592 c         5225 g         4862 t
ORIGIN      
        1 ggaacgaaag agaaatcgaa aagtattcca tactcgccct cctcgggcga gtatgaagat
       61 tacggtaccg gattgactaa cagttgccca atcgagccac ggtccgccat ttccagcgtc
      121 tgactgttga agtagaacgg gaagtgcgcc caggaaggct gaccgaaata aacaagcagc
      181 tccacttgtc cgtcaaccca aacggtatct ttccagcctc tgtcttccgg gaacggcatc
      241 gcaccattca cgttacggat ctggaacatc acgccttcaa tatggaacgc ttgcggctcg
      301 tccgcgcgta ccgtccagcg ttcccacgtt ccttgctgcg cggtgacatc aatacggttg
      361 acgtcccaca gttgtccatt aatacccggg tcatcaccca gactgatatc gcgactgcga
      421 atcggcgaac cggccatgat ttcagttggc agcaagcgca tcggaagact gtctgtgacc
      481 agcggcagaa ggccggttgg gcgcagcgtt agcaccaggg tagaaaccag aatgctggat
      541 ggctcaaaga agccacgaat acgatcaaca atgctcgccg cttcgccaca ggtgatcgac
      601 acttcatcac cgttgctcat atccaccaga atctcgcggc gctcgcccgg tgccaacgaa
      661 agttgcttca ccgatacagg agcaggcagg aatccctgat cgccagaaat cacatgtaac
      721 gggcgaccat cgctcatctg tagttgatag cgacgagagt tcgacgcgtt cagcagtcgc
      781 aagcgcaccc agccacgcga gacttcaacg tacgggcttt gtacaccgtt aaccagcagc
      841 gtatcaccaa caaagccgcc gcttcccggt tcgttgtatt ctggcgtacc aaagttatcc
      901 agccgtttat cctggataat gaccggaaaa tcatccacac cataatggtt ggggataggc
      961 agcgacttgc tgacttcatc ttccaccagc cacattccgg caaggccgtt atagacctgc
     1021 tgagccgtgc ggttgggagt attggcgtga taccacagag tagctgcgtt ctggcgaatg
     1081 ggcagtacgg gtgcccagtc agcgtttggc gacatcatcc gtgccggacc gcccatcagc
     1141 gggcctggta cctgtagccc ggccaccgtc attgagacat tttctgtcag gcggttgctg
     1201 taaataagct taacatcgtc gcccttccag acgcggatag tcggccccag gtaacgacca
     1261 ttgattcccc agaccgacgc gcgtgtccct ggcgtaaatg accagtgcgc acgttgtaca
     1321 gtcataaaca gcggttgccc acggcgagat tcaagtagcg gcggaacggg tagcggttgc
     1381 tgttgcccgg ctgcgctggc cttcagggga acagcgccgg cacaaagtgc aatccccgat
     1441 gcctgaatga actgacgccg actgagtgac atatttgctc catgtaaaac tggctaaagt
     1501 aataccgtgc aggaaagtgt tccccgcaaa aatacagatt gccgacttaa acttttccgg
     1561 cggcttcgcg ttctgcgact tctttatcga gctcggcgat tttttgttcc attatcgaac
     1621 gacaatgggc agccagctca cgaacctgat ctttgccata ctgactgacg tcaattggcg
     1681 gcagcatttc gacaatcacc agaccgttgt gcagtcgatt aagattaatc ttattcgaag
     1741 ttgtagagac gcacacggga ataatcggga cgcccgccgc aattgccgcg tgaaatgctc
     1801 cagtcttgaa cggtagcagg ccgcgaccac ggctgcgggt tccttccggg aacatccaga
     1861 tggaaatacg gcgttttttg aaatgattca cgacttccgc aatggtgccg tgagctttag
     1921 tgcgattgtt tctgtcgatc aataagttgc cggttaacca gtacaattgc ccgaagaagg
     1981 ggatccacag caagctcttt ttacctaccg tcaccgtcgg cggttgcaca atgttcgatg
     2041 ctgtcaccat gtcatagttg ttctggtggt tagcgatata gatagcattg ccgtagcttt
     2101 cagcatctgc aggtttgcgg cactcaactt tcaggccgaa cagcggcgca agacggccaa
     2161 acatatgccc aaaggtggcc acatgtttcg ggttacgcgg gctgaaaagg cagtaaatgg
     2221 agccgaatac acagactaag atgctgtaaa tcacggtaat aataagacga aagatatata
     2281 gcataacaac ctctgaaggt ctgagagact ggcattgtac gtcacctgaa atcaggttag
     2341 ggcattgtta aaagccgctc tctggaaaag cgtattgtta atcgcaacgc atgaataaac
     2401 aacggtttca agggaatttt tatcgtttcc gggggttgaa tacgctgccg aatgacgact
     2461 taacgtttca tccggcgttc cttgcaagcg ggaggaaaca ggccctcccc ggcatattac
     2521 tcttcgctat caccgctgct ggcacggcga ggagagtcga tctcaacacg atcgatacgc
     2581 tgcaaaccgc gcatcaacgt accgcggcgt ccacgttcgc cagtgacttt ctgtaactct
     2641 tccgggcgca gtttaatttt gcgtttccca acatgaatgg tcagcgtgct ttgcggcggc
     2701 agaatgtaca attgcgccag accatcttct ccacgcgcgg cttctgccga tggaatgttg
     2761 ataatcttgt tgcctttgcc cttcgacagc tgcggcagat cgcttaccgg gaacatcaac
     2821 atacggcctg cctgagtgat tgccagcagc atatcggaag catcttcaat caccaccggc
     2881 ggcataacat gggcattttc cggtaaggtg atcaaagcct tacctgcacg gttacgcgcc
     2941 accagatcgt taaaggtgca gacgaaaccg taacccgcat cggaagccat cagcagtttc
     3001 tgatcgtcgc tttccatcag catatggtca acggtcgccc caggcggcaa cgttaatttg
     3061 ccggtgagtg gttcgccctg accacgcgcc gacggcagcg taatcgggtc gatggcatag
     3121 ctacgaccgg tggaatcaac aaacactacc ggttggttgc tcttaccttt caccgccgct
     3181 ttgaagctat cacccgcttt ataattcagg cccggcgcgt cgatatcatg gcctttagcg
     3241 ctgcgtaccc agcccatctg cgacagcaca atggtgacag gttcagacgg cagcatgtcg
     3301 tgctcgctca tcgctttcgc ttcttcgcgt tcctgcaacg gcgaacgacg atcgtcaccg
     3361 taggcttgcg cgtctgcctg cagttctttc ttcagcaggt tattcatttt acgctcggaa
     3421 accaaaatgc cctgcaactg gtcgcgctct ttttccagct cactctgctc accgcgaatc
     3481 ttcatctctt ccagtttggc aagatgacgc agtttcagtt cgaggatcgc ttccgcctgg
     3541 gtttccgtaa ggccaaaccg cgacatcagc gccggtttcg gttcatcttc gttacgaatg
     3601 atctcaatca cttcgtcgat gttgagaaac gccaccagca aaccttccag gatatgcagg
     3661 cgcttgagga ctttctccag acgatagttc agtcggcggc gcacggtatc gcgacggaac
     3721 accagccatt cggagaggat ttccagcagg tttttcaccg ccggacgacc atccagaccg
     3781 atcatattga ggttaatgcg atagctcttt tccagatcgg tggtagcgaa gaggtggttc
     3841 atcacctgat ccatatccac gcggttggaa cgcggcacaa tcaccagacg ggtcgggttc
     3901 tcgtggtcag attcatcgcg cagatcgtca accatcggca gctttttgtt gcgcatttgc
     3961 gcagcaattt gctccagtac gcgcgcacct gaaacctgat gcggcaatgc gctgataacc
     4021 accgcgccat cttctttctt ccacaccgcg cgcatacgca ctgaaccacg tccgttctcg
     4081 tagattttac ggatctcggc gcgcgaagtg ataatttccg cttcagtcgg ataatccggc
     4141 ccctgcacga tatccagcag ctgatcgagc gtggttttcg gctggtcgat taatgcgatt
     4201 gccgcctgag ctacttcacg caggttatgc ggtggaatat cggtcgccat gccgacggca
     4261 ataccggtgg tgccgttaag caaaatgttt ggcagacggg caggcagcat tttcggctcc
     4321 tgcaaagtgc cgtcgaagtt tggcacccag tcagccgtcc cctgccccag ctcgctcaat
     4381 agcagctcgg aatatttcga caaccgggat tcggtgtaac gcattgccgc gaacgatttc
     4441 ggatcgtccg gcgcgcccca gttcccctga ccatcaacca gcggataacg gtaagagaac
     4501 ggctgcgcca tcaggaccat cgcttcataa caggcgctat cgccgtgcgg atggtattta
     4561 cccagtacgt caccgacggt acgggccgat tttttaaatt tagcgctggc attcaggccc
     4621 agttcagaca tcgcatacac aatgcggcgc tgaacaggtt taagaccatc gccaataaac
     4681 ggcaacgcac ggtccatgat cacgtacatg gagtagttta agtaggcgtt ttccgtaaat
     4741 tcatgtagcg caaggcgctc tgccatatcg ctcattaatt ctgattcctc aacttattcg
     4801 ccagccttca aaggggcaat attgccggag atactacatt atctgccgcg tcgagtcaca
     4861 ggagatcagc gtgaatagcg ccgccggacg tgctccgacg gcgataaagg catcaatgtg
     4921 ccttgatata caactctttg ctgtagactt gatcggcata gagggcagca caaggttgcg
     4981 cccatgccac accactcggc atgggggtcc gctccgggcg attcgagaag ttgaggttat
     5041 gcgagtccag ggaagcctaa agcatcaaag tagtcgactg taagtatacg gttcagccca
     5101 gtttagctgt gtctccacca gtgccccgcg cctcctgcca taagtgcggc ttgctcatgg
     5161 atacccccga gacggcttac ggcgcaccgg ataataaatt tcgcgtatac atggtattcc
     5221 ttaccggaga aattataagc ccaacaacaa tacgcctgtg gcattgttcg ctcaaactta
     5281 tcgcgagtga tttggctcac actccggtaa agattcccca tcacgctaac ggcacataaa
     5341 catccgtttc cagtcgctgt tctgtcatac cttcggcaag attggtgtag tgaaacagaa
     5401 tcggtgcttt acgcattttc tcgccgcttg caggcagcca gtggcgaatg atgccccata
     5461 ccgtgtgtga aatatcgtcc agctcgccaa cgtggcgggc cacggcataa cgtccaccgg
     5521 taagttcacc attgctcaca ccataacgat tatcgggaat cggttcgcta acgctgccgc
     5581 agatatcaaa gcgaaacgct ttcggtgcgg tggtggcagg gtcgtcccag gcgacgccaa
     5641 aagtctggct ttggttaaca ggagaaagcc ccgtctcttt acgccacatg ataaatttcg
     5701 ccacactgta gttgagcaac tcagggctac agcggtgcgg caacatcgcc acagggattg
     5761 atgggaaatc gataatgttt acatccagtg tcaggtttgt cattttgcct ccctgcgaaa
     5821 ttattcccgg gaacgcgtcc cgggagcggt aacaattacg gatttacttt gcggatctgt
     5881 ttgacgtcaa tttcaacaga attccagtct ttatcgactt ccccctgaat ctcaaccgta
     5941 tctttcggcg tcaccgtcac accgttccag cgtttgtggt cgatatcaac attgatagta
     6001 ccgctggcat ctttaaacac gtagagatcg tcagagatgc gttcaacgat attgccgcgc
     6061 agggttaccc aggtgtcgtc acgcagggat tttgcgcttt ctacagtcgt tacgctgccg
     6121 ttcggcccct ggaatcctcc ggcctgactt tgcgttgccg atgggccaga aaaaccgccc
     6181 tgctctgctg ccatcaccgg tgcactgcac agggccatta ctgcgattac tgctgcgaat
     6241 tttttcatgt ttattactcc ctttaatgtc tgtttccgag catttaacaa gatagtcctt
     6301 aacaacttct taagggaaaa aaataaaatt taatgctgta cagagcgcgt tacaacacgg
     6361 tttactggca gcaaatacgg ttatcgcagg gatgaaaaaa tgcgaatttt actgatagaa
     6421 gatgacatgc tgattggcga cggcatcaaa actggcctta gtaaaatggg ttttagtgtc
     6481 gactggttta cacaaggtcg tcagggaaaa gaggcgcttt atagcgcacc ttatgatgcg
     6541 gtgatcctgg atttaacctt accaggcatg gatggtcgcg atattttgcg tgaatggcga
     6601 gagaaaggtc agcgtgagcc ggtactgatc ctgaccgcgc gtgatgcgtt agcggaacgt
     6661 gtagaagggc tgcgtcaggg agctgacgat tatctgtgta aaccttttgc gttgatagaa
     6721 gtcgccgcca ggctggaggc tctgatgcgc cgaaccaacg gccaggccag caacgagctg
     6781 cgccacggta acgtcatgct cgaccccggc aaacgtatcg ccacgctggc tggcgaaccc
     6841 ttaacactga aaccaaaaga atttgccctg ctggaattac tgatgcgtaa cgctggtcgg
     6901 gtactaccgc gcaaactgat tgaagagaaa ctgtatacct gggacgaaga ggtcaccagt
     6961 aatgccgttg aagtgcatgt gcatcatctg cgacgcaaac tcggtagtga ttttattcgt
     7021 accgtgcatg gtattggcta cacattaggt gagaaatgaa atttacccaa cgtcttagtc
     7081 tgcgcgtcag gctgacgcta atctttttaa ttctggcctc ggtgacctgg ctgctttcca
     7141 gctttgtcgc ctggaaacaa acaacggata acgtcgatga attgttcgac acccaactga
     7201 tgctgtttgc caagcggtta agtacgctcg atctcaacga aatcaacgcg gcggatcgca
     7261 tggcacagac gccaaataaa ttaaaacacg gtcatgttga tgacgatgcg ctgacctttg
     7321 ccatctttac ccacgacggc agaatggtcc ttaatgatgg cgataacgga gaagatattc
     7381 cctatagcta tcaacgggaa ggttttgctg acgggcaact ggtcggtgaa gacgatcctt
     7441 ggcgttttgt ctggatgacc tcacctgatg gcaaatatcg catcgttgtt ggccaggaat
     7501 gggaataccg tgaagacatg gcgctggcga ttgttgccgg gcaattgatc ccgtggctgg
     7561 tcgcactgcc gattatgtta atcatcatga tggtactact gggtcgtgaa ctcgcgccgc
     7621 tgaacaaact ggcgctggca ctacgtatgc gtgaccctga ctcggaaaaa ccactaaacg
     7681 cgactggcgt acccagcgaa gtgcgaccac tggttgagtc gctaaatcaa ctgttcgccc
     7741 gcacacatgc gatgatggtt cgagaacgac gctttacctc cgatgcagct cacgaactac
     7801 gtagcccgtt aacagcgctg aaagtgcaaa ccgaagttgc gcagctctct gacgatgatc
     7861 cgcaggcgcg gaaaaaagca ctgctccaat tacattccgg gatcgatcgc gctactcgtc
     7921 tggttgatca actgctcacg ctatcgcggc tggactcact ggataacctt caggacgtcg
     7981 cggagatccc gcttgaagat ctcctgcaat cgtcggtgat ggatatttac cacacggcgc
     8041 agcaggcgaa aattgacgtg cgactgacac tcaatgtcca gggcatcaaa cgcaccggac
     8101 aaccgctatt gctaagtttg ttggtgcgaa atttgctgga taacgccgtg cgttacagtc
     8161 cacagggcag cgtggtggac gtcacgctga atgccgataa tttcatcgtg agggataacg
     8221 gccccggtgt gacaccagag gcactggcgc gaattggcga acgcttctat cgcccccccg
     8281 gacaaaccgc taccggcagt ggacttgggc tatcgattgt ccagcgaatc gccaagctgc
     8341 atggcatgaa tgttgagttt gggaatgcgg aacaaggtgg atttgaggcg aaagtaagct
     8401 ggtaagggta agacttttgc taaattcgca aaagactttg cacattttgc taatttcacc
     8461 gtaccgctct gtgacgtact atagtcggca aacgtctcac cttgaggtta aaaaatgagc
     8521 aacattctga ttatcaacgg cgcgaaaaaa ttcgcccact ccaatggtca actgaatgac
     8581 accctgaccg aagtcgcgga tggcacactg cgcgacctcg ggcatgatgt tcgcatcgtt
     8641 cgcgccgaca gcgactacga tgtcaaagcg gaagtacaaa actttctctg ggctgatgtg
     8701 gtgatctggc agatgccagg ctggtggatg ggcgcgccgt ggacagtgaa aaaatacatt
     8761 gatgatgtat tcaccgaagg tcacgggacg ctgtatgcca gcgatggccg tacccgcaaa
     8821 gatccgtcaa aaaaatacgg ttccggcggc ctggtacagg gcaaaaaata tatgctttct
     8881 ctgacctgga acgcaccaat ggaagccttc accgaaaaag atcaattctt ccacggcgtt
     8941 ggcgtcgacg gtgtgtatct gccgttccat aaagcaaacc aattccttgg catggaaccg
     9001 ctgccgacat ttatcgctaa tgacgtgata aaaatgcctg atgttccccg ctatactgaa
     9061 gaatatcgca agcatcttgt ggaaattttt ggttaactag agctcaggct ttagaaggag
     9121 ttaaccatgc ttaccgtaat cgcagaaatc cgtactcgtc ctggtcaaca tcaccgtcag
     9181 gcggtattgg atcagtttgc taaaatcgtt ccaaccgtac tgaaagaaga aggttgccac
     9241 ggctatgcgc caatggtgga ttgcgctgct ggcgtgagtt tccagtctat ggcaccggat
     9301 tctatcgtga tgattgagca gtgggaaagc atcgcgcacc ttgaagcgca tctgcaaacc
     9361 ccgcacatga aggcgtacag cgaagccgta aaaggtgacg tgctggagat gaatattcgt
     9421 attctgcagc cagggattta atcctgcctt gtttgcccgg ccatcctgac cgggcaatgt
     9481 tctttccttt aaacctcaat ctccgccatg tcgcctttct cttgcaacca gttgcggcga
     9541 tcttccgagc gtttcttcgc cagtagcatg tccatcatcg cgtcagtacg ctgatcgtct
     9601 tcatcatcga tagtcaactg caccagacgg cgagtgttcg gatcaagcgt ggtttcgcgc
     9661 aattgcatcg ggttcatttc ccccagacct ttaaaacgct ggacgttcgg cttgcctttc
     9721 ttgcgtttta attgctcaag tacgccctct ttctcttctt ccgtcagcgc gtaataaacc
     9781 tctttcccga gatcaatacg gtagagcggt ggcagtgcga cgtaaacgtg accgtgtttc
     9841 accaacgcgc ggaagtgttt tacaaacaaa gcgcagagca gcgtggcaat gtgcagacca
     9901 tcggagtcag catccgccag gatacagatc ttgccgtaac gaagctggct caaatcgtcg
     9961 ctgtcaggat cgataccgat cgctaccgaa atatcgtgca cttcctgcga agccagcact
    10021 tcgtcggaag agacttccca ggtgttaagg atcttacctt tcagtggcat gatcgcctga
    10081 tattcgcgat cgcgcgcctg cttggcagat ccgcctgcgg agtcaccttc cacaagaaac
    10141 agttcggtgc ggttaaggtc ctgcgcggta cagtcagcca gtttgccagg cagcgccgga
    10201 ccgctggtca gctttttacg caccactttt ttagccgcac gcatacgacg ctgggcgctg
    10261 gaaatcgcca tctctgccag caactccgcc gcctgaacgt tctggttcag ccacaggata
    10321 aaggcatctt tcaccacgcc agaaacgaat gccgcgcact gacgcgaaga gagacgctct
    10381 ttggtctgcc cggcaaactg cggatcctgc atttttactg acagcacata ggcgcagcga
    10441 tcccagatat cttccgccga cagctttaca ccgcgcggca gaatgttgcg gtattcacag
    10501 aactcacgca tcgcgtccag caggccctga cgcagaccat taacatgggt accgccctgc
    10561 atcgttggga tcaggttgac gtagctttcg gtcagcaatt caccgccttc cggcagccac
    10621 agtagcgccc agtccaccgc ttcagtatcg ccagcgaaat taccgataaa cggtttttct
    10681 ggcagcgtcg gtaaaccgtt taccgcttcc gccaggtaat cattcagacc gtcctgatag
    10741 caccagcgct gttcggtgtt gttgatctca tctttaaagg taatctcaac gccggggcac
    10801 agtactgctt tggctttcag cacatgcgtc aggcgtgaaa cagaaaaacg cgggctatcg
    10861 aagaaggttt catccggcca gaaatggacg ctggtgccgg tattgcgttt accgcaagtg
    10921 ccgacaacct gtaaatcctg caccttttcg ccattttcaa aggcgatgtt ataaatctga
    10981 ccatcgcggc gcacgttaac ttctacgcgc ttcgacaggg cgttaaccac cgaaatcccc
    11041 acgccatgca ggccgccaga gaactggtaa tttttgttag agaatttacc gcctgcatgc
    11101 agacggcaaa gaatcagttc aaccgccggt acaccctctt ccgggtgaat atccaccggc
    11161 atcccgcgcc catcgtcaat aacttctaac gactggtcag catgtaaaat aacgtccacg
    11221 cgttttgcgt gacccgccag tgcttcatcc acactgttat caatgacttc ttgccccaaa
    11281 tggttagggc gagtggtatc ggtatacatc cccggacggc ggcgaaccgg ctcaagtccg
    11341 gtgagtacct caatggcatc agcgttataa gtttgcgtca tggtttaagt tagtaattcg
    11401 agttgatcgt cagagatggt gcagaccaag aaaatcgacg atcgggttga aataatcttc
    11461 gaagcccgtg aatgcgtggt tgccgccttc tatgacagtc tggcggcaga aagcgtagta
    11521 cgccaccgcc tggcggtaat ccagcacttc atctcccgtc tgttgcagca gccagatcaa
    11581 atccggcgct tccagcgagt caatctgcat gactttaaga tcgtaaatat ggcgtgactc
    11641 tagcacatat tgctgcccgg tgtaggggtt ctcgttctga ccgagatagt ccgtcagcag
    11701 ttcaaacggg cgcaccgccg ggtttaccac cactgcgggc agcataaaac attgtgacaa
    11761 ccaggtggcg taatatcccc ccagtgacga accgacaata cccagcgaat cgccgccatg
    11821 ttccaggaca atggattcca gcagctctgc cgcgtcggaa ggatacggcg gcaactgcgg
    11881 aatgatcatc tcaacgtcag ggtgatgttc cgccagccag ttttttaaca agctcgcttt
    11941 tgcagagcgc ggcgagctgt tgaaaccgtg taaataaaga agcgtagaca tcagtagcct
    12001 tctgaagcgg tatcaggttg gaaacgtgtg tccgccaggc gatgcacctc ggtggtcagc
    12061 gtgccatcag catgtaactc gagagtacgc cagccgggcg cgatggtatc cagcgtaaag
    12121 ttggaacagt gcggcttaaa ctgcacacag gtcgacggcg ttgccagcag gcggcgaccg
    12181 ttccagtcga gatccagctc ctgatgaata tgaccgcaca gcaagtattt gacgtgcgga
    12241 aacttcgcca gcacggtatc cagttcgccc gcgttacgca gactgtgttg atcgagccaa
    12301 ctacaacccg caggtagcgg atgatgatgc agcagcagca acgtatggcg ttctggcgca
    12361 tcggccagtt tacgttccag ccactcaagc tgaaactcgc tcagctcacc gtgcggcacg
    12421 ccaaacacct ggctatccag caacaggatt tgccattgct caccaataaa cacgcgcttc
    12481 gccggggaga tacccgcatc ctgtaacgcg ctgtacatcg cgggctggaa atcgtggttg
    12541 cccggcagcc agacgcaggg cgcacgaaaa cttgcgatgc cttcagcgaa atgctgatag
    12601 gccgcagagg attgatcctg cgctaaatca cctgtcgcga caatcaggtc gaattcgtgc
    12661 tgatgtggac gaatcgcctc cagcaccgcc tggtagcttt cccaggtgtt tacccctaac
    12721 agggcttcgt gcttttgtgc aaacaggtga gtatcggtaa tttgtaaaat cctgactctg
    12781 gcctcaccag ccagaggaag ggttaacagg ctttccaaat ggtgtcctta ggtttcacga
    12841 cgctagtaaa ccggaatcgc catcgctcca tgtgctaaac agtatcgcaa ccagtccgct
    12901 aaaaactggt taatttgatg cttttcgtcg cgttgatgca actttttatt aggataatca
    12961 taccgcgctt tgaagcgaaa aatctgctgg cttgaacaca cttcagccac catcgcgtca
    13021 tgatacagac gcaccgtcat tgacggaagg ctccagtaac tgatcgcggg cgcagtctgt
    13081 tctattgtca ccagggtagt gtatcgggtc gattccacaa tcgtcagccg atattgtgcg
    13141 tttgccacct gatagcttac agtttcgccg ggtgcgtcat tgcgcggtaa caaacggcgc
    13201 aattgtgaaa agttcatctc gcacaggcgc atcatttcag gaaagtcagg tgtgtaacgc
    13261 ttcatttatg cccactcatt ttttaacgct tgatggtgca gctgcagcca ttgcaaagcg
    13321 atgagcgacg ctgcgttgtc gattttcccc tcttctaccc actggtatgc ctgttcccgg
    13381 cttaccacat gaacgcgaat atcttcgttt tcatcagcca gaccatgaat accgcttgcg
    13441 gtcgtggcgt ccacttcgcc caccataatt gacgaacgct cactggtgcc ccccgggctt
    13501 gccaggaaac ttaacaccgg tttggtccgt ttgactatca gccccgcctc ttcaatcgct
    13561 tcgcgacggg caacatcttc cacactttca ccctcttcaa tcatcccggc aaccatctcc
    13621 agtagccagg gggtttcgct agtgtcgtac gcggcaattc gaatctgctc aatcagcaca
    13681 acttcatcac gcactgggtc aaagggtagc aagactgcgg cgtgaccgcg ctcaaaaatt
    13741 tcccgccgca cctcatgact catttgcccg ttgaatagac gatgacgaaa tctataaaga
    13801 tctaatgaaa aaaagccgcg ataaagtgtt tctcgtgcaa taatttctac atcgtttttg
    13861 ccaaatgtaa cgggcaggtt gtctggctta agcattgtta atgtcctggc actaatagtg
    13921 aattaaatgt gaatttcagc gacgtttgac tgccgtttga gcagtcatgt gttaaattga
    13981 ggcacattaa cgccctatgg cacgtaacgc caaccttttg cggtagcggc ttctgctaga
    14041 atccgcaata attttacagt ttgatcgcgc taaatactgc ttcaccacaa ggaatgcaaa
    14101 tgaagaaatt gctccccatt cttatcggcc tgagcctttc tgggttcagt tcgttgagcc
    14161 aggccgagaa cctgatgcaa gtttatcagc aagcacgcct tagtaacccg gaattgcgta
    14221 agtctgccgc cgatcgtgat gctgcctttg aaaaaattaa tgaagcgcgc agtccattac
    14281 tgccacagct aggtttaggt gcagattaca cctatagcaa cggctaccgc gacgcgaacg
    14341 gcatcaactc gaacgcgacc agtgcgtccc tgcagttagc tcaatccatt tttgatatgt
    14401 cgaaatggcg tgcgttaacg ctgcaggaaa aagcagcagg gattcaggac gtcacatatc
    14461 agaccgatca gcaaaccttg atcctcaaca ccgcgaccgc ttatttcaac gtgttgaatg
    14521 ctattgacgt tctttcctat acacaggcac aaaaagaagc gatctaccgt caattagatc
    14581 aaaccaccca acgttttaac gtgggcctgg tagcgatcac cgacgtgcag aacgcccgcg
    14641 cgcagtacga taccgtgctg gcgaacgaag tgaccgcacg taataacctt gataacgcgg
    14701 tagagcagct gcgccagatc accggtaact actatccgga actggcggcg ctgaatgtcg
    14761 aaaactttaa aaccgacaaa ccacagccgg ttaacgcgct gctgaaagaa gccgaaaaac
    14821 gcaacctgtc gctgttacag gcacgcttga gccaggacct ggcgcgcgag caaattcgcc
    14881 aggcgcagga tggtcactta ccgacgctgg atttaacggc ttctaccggg atttctgaca
    14941 cctcttatag cggttcgaaa actcgtggtg ccgctggtac ccagtatgac gacagcaata
    15001 tgggccagaa caaagtgggc ctgagcttct cgctgccgat ttatcagggc ggaatggtta
    15061 actcgcaggt gaaacaggcc cagtacaact ttgttggtgc cagcgagcaa ctggaaagcg
    15121 cgcatcgtag catcgtgcaa accgtacgtt cctccttcaa caacattaat gcatctatca
    15181 gtagcattaa cgcctacaaa caagccgtag tttccgctca aagctcatta gacgcgatgg
    15241 aagcgggcta ctcggtcggt acgcgtacca ttgttgatgt gttggatgca accaccacgc
    15301 tgtacaacgc taagcaagag ctggcaaatg cgcgttataa ctacctgatt aatcagctga
    15361 atattaagtc agccctgggt acgttgaacg agcaggatct gctggcactg aacaatgcgc
    15421 tgagcaaacc ggtttccact aatccggaaa acgttgcccc gcaaacgccg gaacagaatg
    15481 ctattgctga tggttatgcg cctgatagcc cggcacccgt cgttcagcaa acatccgcac
    15541 gcactaccac cagtaacggt cataaccctt tccgtaactg atgacgacga cggggcttcg
    15601 gccccgtctg aacgtaagac aacgtaaaga tacgggttat ctgccgcatt cttccccctt
    15661 ctcgcttcaa tttcgaccag ccatcctcta ttctgatggg tatttaccac tggtcccgga
    15721 agacaaaaat gaaacggaca aaatccatac gccacgcatc gttccgcaaa aactggagcg
    15781 cacgccatct gacaccagtc gctctcgcgg ttgccactgt ttttatgctg gctagctgtg
    15841 aaaagagtga tgaaacagtg tctctctatc aaaatgctga cgactgttca gctgcaaacc
    15901 caggcaaaag cgccgaatgt accaccgcgt acaacaatgc gctgaaagaa gccgaacgta
    15961 ctgcgccgaa atacgccacc cgtgaagact gtgttgctga atttggtgaa ggtcagtgcc
    16021 agcaggcacc agcccaggct ggcatggcac cagaaaacca ggcgcaggcc cagcaatcca
    16081 gcgggagttt ctggatgccg ctgatggccg gttacatgat ggggcgtctg atgggcggcg
    16141 gcgcgggatt tgcacagcag ccgctgttct cctcgaaaaa cccagccagc ccggcttacg
    16201 gtaaatatac cgacgcgacg ggtaaaaact atggcgcagc ccagccaggc cgcaccatga
    16261 ccgtaccgaa gacagccatg gcaccaaaac cggcgaccac tactaccgtt acccgtggcg
    16321 gttttggtga atctgttgcc aaacaaagca ctatgcagcg tagcgcaacc ggcacctctt
    16381 ctcgttcaat gggtggctga taccgatgga aagagtcagt attaccgagc gcccggactg
    16441 gcgtgaaaaa gcccacgaat acggtttcaa ttttcacacc atgtacggcg agccgtactg
    16501 gtgtgaagat gcttactaca agttgaccct cgcccaggtt gaaaagctgg aagaagtcac
    16561 cgccgaactg caccagatgt gcctgaaagt ggtggaaaaa gtgatcgcca gcgatgagct
    16621 gatgaccaaa ttccgcattc caaaacacac ctggagtttt gtgcgtcagt catggctgac
    16681 tcaccagcca tcgctttatt cgcgtcttga tctggcatgg gatggcactg gcgaacctaa
    16741 actgctggaa aataacgccg atacaccaac gtcactatac gaggcggcgt tctttcagtg
    16801 gatctggctg gaagatcagc ttaacgccgg taacttgccg gagggcagcg accagtttaa
    16861 cagtctgcaa gaaaagctaa tcgatcgctt tgtcgagttg cgtgaacagt atggcttcca
    16921 gttgctgcat ctcacctgct gtcgcgacac ggtggaagat cgcggaacca ttcagtattt
    16981 gcaggactgc gcgacggaag ctgaaatcgc taccgagttc ctctacattg acgatatcgg
    17041 gttaggtgaa aaaggtcagt tcacggattt acaggatcag gtaatttcca acctgttcaa
    17101 gctgtatcca tgggaattta tgttgcgtga gatgttctcc accaagctgg aggatgcagg
    17161 cgtacgctgg ctggaaccgg cgtggaagag cattatctcc aacaaagcgc ttctaccgct
    17221 actgtgggag atgttcccga atcacccgaa cctgctgccc gcttattttg cggaagatga
    17281 tcatccgcaa atggaaaaat atgtggttaa accgatcttc tcccgtgaag gcgcaaacgt
    17341 gtcgatcatt gagaacggca aaaccattga agcagcggaa ggtccgtatg gcgaagaagg
    17401 gatgattgtt cagcaattcc atccgttacc gaaattcggc gacagctata tgctgattgg
    17461 tagctggctg gtgaacgatc aacccgccgg aattggcatt cgtgaagacc gtgcattgat
    17521 cacccaggat atgtctcggt tttatccaca tatttttgtt gagtaatcaa tgatgccgga
    17581 tggcattcgc catccggtaa ttgttaacct atctgcaccg acagcatact caggctgccc
    17641 atttctatac catcgaccgg aatggtaatt ggctcctgcc catcccacgc acctaagaca
    17701 tacaacaacg gcagatagtg ctccggcgtt gggttcgata acgcgccacc ttcatggtcg
    17761 aggtaattca ccagaggatg ctgctctacc gccccttgcc acgtcagatt cgctttcaca
    17821 tactcattaa acgacatcgc ccaaggatat gatgaactat caccgtgcca cttcactgta
    17881 cgcaggttat gcaccacgtt gccactggcg accaacatta ttccttcatc tcgcagcgct
    17941 gccagtttgc gccccatttc gaaatgccag gcggcaggtt tgctactgtc gatactcaac
    18001 tgcaccatcg ggatatcggc gtcaggatac atcttaatca gcacgcccca ggaaccgtgg
    18061 tcaaagcccc aggcttcttt atccagcgtc accgggaccg gcgctaacag ctcaaccaga
    18121 tgctgtgcca gcacaggcga acccggagca ggataatgcg tatcgtacag cgcctgcggg
    18181 aagccaccaa agtcatgaat cgtgggcggc gtctccatcg cggtcactcc tgttccacgg
    18241 gtaaaccagt gagccgaaac caccacaatc gcttgcgggc gtggcaatgt catccccaac
    18301 ttctgccagc tgcgggtata caaattatct tccagcacgt tcatcggact accgtgacct
    18361 aaaaacaatg ctggcatacg tgttgaagac atgatgatat ccttaactaa gggtgtcatt
    18421 ttgatatcct cacaatacgc ttgttcggcg gagtaagaac ccggataaca atgatgatga
    18481 tcatcagtta ttttgacgat ctgcctgaag gtgaagattt ataaggagtt gtcgatgtca
    18541 gtacctctca ttctgaccat actggcgggg gcagccacgt ttattggcgc gtttctcggc
    18601 gttctcggac aaaaaccctc gaaccgctta ctggcgtttt cgctaggttt tgcggcgggg
    18661 atcatgttgc tcatctcatt aatggaaatg cttcctgccg cactagcagc tgaaggaatg
    18721 tcgcctgtgt tgggttatgg aatgtttatc ttcggtctgc ttggctactt tggcctggac
    18781 cgcatgttgc cgcatgcgca tccgcaggat ttaatgcaaa aatcggtgca gccgttgcca
    18841 aaatcgatca agcgcacagc cattctgctc actctcggca tcagtctgca taacttcccg
    18901 gaagggattg ccacctttgt cacggcgagc agcaacctgg agctgggatt tggcatcgca
    18961 ctggccgtcg cgttgcacaa tatccctgaa ggtctggcag tggcaggccc ggtttatgcg
    19021 gcaacggggt ctaaacgcac cgcgattctg tgggcgggga tttctggact agcagaaatt
    19081 cttggtggtg tgctggcgtg gttaatcctc ggtagcatga tttccccggt ggtcatggcg
    19141 gcggttgcag gaattatggt ggcgctctcg gttgatgaat taatgccgct cgccaaagag
    19201 attgacccta ataataaccc cagctatggc gtactatgtg gaatgtcagt gatgggattc
    19261 agtttagtgc tgctacaaac ggcgggaatt ggttaaaaac aacatcagaa gttgtccagc
    19321 acatggacaa cttctgccag cttcacgaaa gccttattct accttttcgg ctgtctcttc
    19381 tctcgtactg tttaagtatt tgttccgcgc ttcaagcagt gcgtctctgt cctggcgaaa
    19441 cgcccgacaa taacgtttca aatgcaggaa ataacccacc acaaccagag caatcaatac
    19501 aatccagtac caggcgataa acatcctttt acccttaata tttaacaata ctaaacattt
    19561 agcgcataaa tttcacatat cctttttcgg atatattcat atggtcgcat aataacggaa
    19621 caattatatg attttgatca taatgaaaaa gaatgcctga tattaatgaa attttctcat
    19681 agaaagagaa gcggaattaa catcttgcat agcagggcaa aataaaaacc gaagccagct
    19741 acaacttcgg tttcttgatt aaggcagtaa ttaagcagcg gttttcagct ggctttacgc
    19801 tcatgtgcct gacggtatgc caccaggtct tcaatagtca cgagcgccat attgtgttta
    19861 ttggcaaact caatgcactc tggtgcacgc gccatcgtgc catcgtcatt agtcagctca
    19921 cacagcacac cagccggttt aaagcctgcc agcgtcatca aatcaatagt cgcttcagta
    19981 tgaccgccac gcgtcagtac accacctgcc tgcgcgcgaa gtgggaaaac gtggcccggg
    20041 cgattcagat cagaaggttt tgcgccatcg gcaatcgctg cgcgaacggt cgtaatacga
    20101 tcagcggcag aaacaccggt agtcacacct tcagccgctt caatggtcac ggtaaaaccg
    20161 gtgccatagg cgctggtgtt attttctacc atcattggca gatcaagttg tttacggcga
    20221 tcttcagtga tgcacaggca aacaataccg ctaccgtggc gaatggtcag cgccatctgc
    20281 tcaacggtca tggtttctgc cgggaagatc atatcgcctt cgttttcacg gtcttcatca
    20341 tcaagcacca ttacaccgcg tccttcacgc agcgcagcca gtgcattttc aacacgttcg
    20401 aaaggcgtac caaaagagga aagtagcgtc tgattcatgg taaaaaaaac tcactaaaat
    20461 tatggttacc agaatcaggg cagtcttagg agtggcggca tatagccaaa ataacgtgag
    20521 cgggtccatg cccgacagaa tcgttactct ctcccatccg gactctaacc gtcggccccg
    20581 gaattacacc ggatctgctg tcctttgagt tcgcacccaa agcgctcgcg ggctttcaac
    20641 tgagttgatt taccgccggt ggggaatttc gccccgccct gagaataagc ggattcacta
    20701 taacgctaat gattagcggc agcaacgcat agcttcacat aattct
//
LOCUS       DADMHC010000059        20529 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.059, whole genome shotgun sequence.
ACCESSION   DADMHC010000059 DADMHC010000000
VERSION     DADMHC010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20529)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20529)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20529
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.059"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(221..766)
                     /gene="hemG"
                     /locus_tag="JNZ57_001791"
     CDS             complement(221..766)
                     /gene="hemG"
                     /locus_tag="JNZ57_001791"
                     /EC_number="1.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone-dependent protoporphyrinogen IX
                     dehydrogenase"
                     /protein_id="HAY8828032.1"
                     /translation="MKTLILFSTRDGQTREIASYLASELKELGIQTDVANVHRIEEPQ
                     WKNYDRVVIGASIRYGHYHSAFQEFVKKHATRLNSMPSAFYSVNLVARKPEKRTPQTN
                     SYARKFLMSSQWRPDRCAVIAGALRYPRYRWYDRFMIKLIMKMSGGETDTRKEVVYTD
                     WEQVANFAREIAQLTNKPTLK"
     gene            complement(778..2229)
                     /gene="trkH"
                     /locus_tag="JNZ57_001792"
     CDS             complement(778..2229)
                     /gene="trkH"
                     /locus_tag="JNZ57_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004146450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkH"
                     /protein_id="HAY8828033.1"
                     /translation="MHFRAITRIVGLLVILFSGTMIIPGLVALIYRDGAGRAFTQTFF
                     VALAIGSMLWWPNRKEKGELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAF
                     FESFSGLTTTGATTLVGLDSLPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQL
                     YRAEMPGPLKDNKMRPRIAETAKTLWLIYVLLTVACALALWFAGMDAFDAIGHSFATI
                     AIGGFSTHDASIGYFDSPTINTIIAIFLLISGCNYGLHFSLLSGRSLKVYWRDPEFRM
                     FIGVQFTLVVICTLVLWFHNVYSSALMTINQAFFQVVSMATTAGFTTDSIARWPLFLP
                     VLLLCSAFIGGCAGSTGGGLKVIRILLLFKQGNRELKRLVHPNAVYSIKLGNRALPER
                     ILEAVWGFFSAYALVFIVSMLAIIATGVDDFSAFASVVATLNNLGPGLGVVADNFTSM
                     NPVAKWILIANMLFGRLEVFTLLVLFTPTFWRE"
     gene            complement(2268..2882)
                     /locus_tag="JNZ57_001793"
     CDS             complement(2268..2882)
                     /locus_tag="JNZ57_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMPACT family protein"
                     /protein_id="HAY8828034.1"
                     /translation="MESWLIPAAPVTVVEEIKKSRFITMLAHTDGVEAAKAFVESVRA
                     EHPDARHHCVAWVAGAPDDSQQLGFSDDGEPAGTAGKPMLAQLMGSGVGEITAVVVRY
                     YGGILLGTGGLVKAYGGGVNQALRQLTTQRKTPLTEYTLQCEYSQLTGIEALLGQCDG
                     KIINSDYQAFVLLRVALPAAKVAEFSAKLADFSRGSLQLLAIEE"
     gene            complement(2882..4213)
                     /gene="pepQ"
                     /locus_tag="JNZ57_001794"
     CDS             complement(2882..4213)
                     /gene="pepQ"
                     /locus_tag="JNZ57_001794"
                     /EC_number="3.4.13.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020801804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro dipeptidase"
                     /protein_id="HAY8828035.1"
                     /translation="MESLASLYKNHIATLQERTRDALARFKLDALLIHSGELFNVFLD
                     DHPYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLWFYLPVDYWHNVEPLPTSFWTE
                     DVEVIALPKADGIGSLLPAARGNIGYIGPVPERALQLGIEASNINPKGVIDYLHYYRS
                     FKTEYELACMREAQKMAVNGHRAAEEAFRSGMSEFDINIAYLTATGHRDTDVPYSNIV
                     ALNEHASVLHYTKLDHQAPEEMRSFLLDAGAEYNGYAADLTRTWSAKSDNDYAQLVKD
                     VNDEQLALIATMKAGVSYVDYHLQFHQRIAKLLRKHQIITDMSEEAMVENDLTGPFMP
                     HGIGHPLGLQVHDVAGFMQDDSGTHLAAPAKYPYLRCTRILQPGMVLTIEPGIYFIES
                     LLAPWREGQFSKHFNWQKIEALKPFSGIRIEDNVVIHENNVENMTRDLKLA"
     gene            4403..6592
                     /gene="fadB"
                     /locus_tag="JNZ57_001795"
     CDS             4403..6592
                     /gene="fadB"
                     /locus_tag="JNZ57_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001490315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid oxidation complex subunit alpha FadB"
                     /protein_id="HAY8828036.1"
                     /translation="MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGEAIG
                     VLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLP
                     VPTIAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGA
                     DSALEIIAAGKDVGADQALKIGLVDGVVKAEKLVEGAKAVLRQAINGDLDWKAKRQPK
                     LEPLKLSKIEATMSFTIAKGMVAQTAGKHYPAPITAVKTIEAAARFGREEALNLENKS
                     FVPLAHTNEARALVGIFLNDQYVKGKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAW
                     KGVPVVMKDINDKSLTLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYAGFDR
                     VDVVVEAVVENPKVKKAVLAETEQKVRPDTVLASNTSTIPISELANALERPENFCGMH
                     FFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFA
                     GFSQLLRDGADFRKIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQK
                     DYRDAIDALFDANRFGQKNGLGFWRYKEDSKGKPKKEEDAAVEDLLAEVSQPKRDFSE
                     EEIIARMMIPMVNEVVRCLEEGIIATPAEADMALVYGLGFPPFHGGAFRWLDTLGSAK
                     YLDMAQQYQHLGPLYEVPEGLRNKARHNEPYYPPVEPARPVGDLKTA"
     gene            6602..7765
                     /gene="fadA"
                     /locus_tag="JNZ57_001796"
     CDS             6602..7765
                     /gene="fadA"
                     /locus_tag="JNZ57_001796"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase FadA"
                     /protein_id="HAY8828037.1"
                     /translation="MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPA
                     LEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAA
                     RMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLARMHGI
                     SREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEA
                     LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCD
                     PSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINL
                     NGGAIALGHPLGCSGARISTTLLNLMERKDVQFGLATMCIGLGQGIATVFERV"
     gene            complement(7957..8658)
                     /gene="fre"
                     /locus_tag="JNZ57_001797"
     CDS             complement(7957..8658)
                     /gene="fre"
                     /locus_tag="JNZ57_001797"
                     /EC_number="1.5.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-flavin reductase"
                     /protein_id="HAY8828038.1"
                     /translation="MTTLSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDER
                     DKRPFSMASTPDEKGFIELHIGASEINLYAKAVMDRILKDYQIVVDIPYGEAWLRDDE
                     ERPMILIAGGTGFSYARSILLTALARNPNRDITIYWGGREEQHLYDLSELEALSLKHP
                     GLRVVPVVEQPEAGWRGRTGTVLTAVLQDHGTLAEHDIYIAGRFEMAKIARDLFCSER
                     NAREDRLFGDAFAFI"
     gene            complement(8704..10197)
                     /gene="ubiD"
                     /locus_tag="JNZ57_001798"
     CDS             complement(8704..10197)
                     /gene="ubiD"
                     /locus_tag="JNZ57_001798"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HAY8828039.1"
                     /translation="MDAMKYNDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLR
                     AGGPALLFENPKGYSMPVLCNLFGTPKRVAMGMGQEDVSALREVGKLLAFLKEPEPPK
                     GFRDLFDKLPQFKQVLNMPTKRLRGVPCQQKIVSGDDVDLNRIPIMTCWPEDAAPLIT
                     WGLTVTRGPHKERQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEWCAAHPGERFPVS
                     VALGADPATILGAVTPVPDTLSEYAFAGLLRGTKTEVVKCISNDLEVPASAEIVLEGY
                     IEQGETAPEGPYGDHTGYYNEVDSFPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGV
                     ALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTIKKQYAGHAKRVMMGVWSFLRQF
                     MYTKFVIVCDDDVNARDWNDVIWAITTRMDPARDTVLVENTPIDYLDFASPVSGLGSK
                     MGLDATNKWPGETQREWGRPIKKDPDVVAHIDAIWDELAIFNNGKSA"
     gene            10364..10852
                     /gene="rfaH"
                     /locus_tag="JNZ57_001799"
     CDS             10364..10852
                     /gene="rfaH"
                     /locus_tag="JNZ57_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription/translation regulatory transformer
                     protein RfaH"
                     /protein_id="HAY8828040.1"
                     /translation="MQSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRT
                     AVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYKPK
                     DIVDPATPYPGDKVIITEGAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFR
                     KL"
     gene            complement(10849..11631)
                     /gene="tatD"
                     /locus_tag="JNZ57_001800"
     CDS             complement(10849..11631)
                     /gene="tatD"
                     /locus_tag="JNZ57_001800"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' ssDNA/RNA exonuclease TatD"
                     /protein_id="HAY8828041.1"
                     /translation="MFDIGVNLTSSQFAKDRDDVVARAFDAGVNGLLITGTNLRESQQ
                     AQKLARQYSSCWSTAGVHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNRNFST
                     PEEQERAFVAQLRIAAELNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREE
                     MQACVARGIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDFTPKPSS
                     RRNEPAHLHHILQRIAHWRGEDAAWLAATTDANVKTLFGIAF"
     gene            complement(11673..12449)
                     /gene="tatC"
                     /locus_tag="JNZ57_001801"
     CDS             complement(11673..12449)
                     /gene="tatC"
                     /locus_tag="JNZ57_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatC"
                     /protein_id="HAY8828042.1"
                     /translation="MSVEDTQPLITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHL
                     VSAPLIKQLPQGSTMIATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKH
                     ERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMA
                     LFMAFGVSFEVPVAIVLLCWMGITSPEDLRKKRPYVLVGAFVVGMLLTPPDVFSQTLL
                     AIPMYCLFEIGVFFSRFYVGKGRNREEENDAEAESEKTEE"
     gene            complement(12452..12967)
                     /gene="tatB"
                     /locus_tag="JNZ57_001802"
     CDS             complement(12452..12967)
                     /gene="tatB"
                     /locus_tag="JNZ57_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HAY8828043.1"
                     /translation="MFDIGFSELLLVFIIGLVVLGPQRLPVAVKTVAGWIRALRSLAT
                     TVQNELIQELKLQEFQDSLKKVEKASLTNLTPELKASMDELRQAAESMKRSYVANDPE
                     KASDEAHTIHNPVVKDNEAAHEGVTPAAAQTQASSPEQKPETTPEPVVKPAADAEPKT
                     AAPSPSSSDKP"
     gene            complement(12971..13240)
                     /gene="tatA"
                     /locus_tag="JNZ57_001803"
     CDS             complement(12971..13240)
                     /gene="tatA"
                     /locus_tag="JNZ57_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HAY8828044.1"
                     /translation="MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMS
                     DDEPKQDKTSQDADFTAKTIADKQADTNQEQAKTEDAKRHDKEQV"
     gene            complement(13320..14960)
                     /gene="ubiB"
                     /locus_tag="JNZ57_001804"
     CDS             complement(13320..14960)
                     /gene="ubiB"
                     /locus_tag="JNZ57_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HAY8828045.1"
                     /translation="MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWM
                     PNRHKDKLLGERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDG
                     KLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDIL
                     PVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRR
                     NFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFF
                     TQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFN
                     RDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTAR
                     RFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALVRAF
                     KEKAPFWVEKMPELPELVYDSLRQGKYLQHSVDKIARELQSNHVRQGQSRYFLGIGAT
                     LVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFVGWRKTR"
     gene            complement(14957..15562)
                     /gene="ubiJ"
                     /locus_tag="JNZ57_001805"
     CDS             complement(14957..15562)
                     /gene="ubiJ"
                     /locus_tag="JNZ57_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis protein UbiJ"
                     /protein_id="HAY8828046.1"
                     /translation="MPFKPLVTAGIESLLNTFLYRSPALKTARSRLLGKVLRVEVKGF
                     STSLILVFSERQVDVLGEWAGDADCTVIAYASVLPKLRDRQQLTALIRSGELEVQGDI
                     QVVQNFVALADLAEFDPAELLAPYTGDIAAEGISKAMRGGAKFLHHGIKRQQRYVAEA
                     ITEEWRMAPGPLEVAWFAEETAAVERAVDALTKRLEKLEAK"
     gene            complement(15576..16331)
                     /gene="ubiE"
                     /locus_tag="JNZ57_001806"
     CDS             complement(15576..16331)
                     /gene="ubiE"
                     /locus_tag="JNZ57_001806"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HAY8828047.1"
                     /translation="MVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMS
                     FGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLK
                     MGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVL
                     KPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQ
                     DTLKAMMQDAGFESVDYYNLTAGVVALHRGYKF"
     gene            complement(16426..17853)
                     /gene="rmuC"
                     /locus_tag="JNZ57_001807"
     CDS             complement(16426..17853)
                     /gene="rmuC"
                     /locus_tag="JNZ57_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HAY8828048.1"
                     /translation="MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAE
                     LSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIR
                     QMINSEQRLSEQFENLANRIFEHSNCRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSF
                     GKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASG
                     LREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTR
                     ESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE
                     ALKNNIMLVSPTTLQVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAI
                     GQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEY
                     RLRSVPEQPNDEAYQRDDEYNQQSR"
     gene            complement(17994..18755)
                     /gene="udp"
                     /locus_tag="JNZ57_001808"
     CDS             complement(17994..18755)
                     /gene="udp"
                     /locus_tag="JNZ57_001808"
                     /EC_number="2.4.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine phosphorylase"
                     /protein_id="HAY8828049.1"
                     /translation="MSKSDVFHLGLTKNDLQGATLAIVPGDPDRVEKIAALMDKPVKL
                     ASHREFTTWRAELDGKPVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHI
                     NVGDVLVTTASVRLDGASLHFAPLEFPAVADFECTTALVEAAKSIGATTHVGVTASSD
                     TFYPGQERYDTYSGRVVRHFKGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAG
                     VIVNRTQQEIPNAETMKQTESQAVKIVVEAARRLL"
     gene            19017..19829
                     /locus_tag="JNZ57_001809"
     CDS             19017..19829
                     /locus_tag="JNZ57_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HAY8828050.1"
                     /translation="MATTQQSGFAPAASPLASTIVQTPDDAIVAGFTSIPSQGDNMPA
                     YHARPKQSDGPLPVVIVVQEIFGVHEHIRDICRRLALEEYLAIAPELYFREGDPNDFA
                     DIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDVHRLMITGFSWGGRITWLYAAHN
                     PQLKAAVAWYGKLTGDKSLNSPKQPVDIATDLNAPILGLYGGQDNSIPQESVETMRQA
                     LRAANAKAEIIVYPDAGHAFNADYRPSYHAESAKDGWQRMLEWFKQYGGKRS"
     gene            20223..20529
                     /gene="hcp"
                     /locus_tag="JNZ57_001810"
                     /pseudo
     CDS             20223..20529
                     /gene="hcp"
                     /locus_tag="JNZ57_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016243957.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
BASE COUNT         4991 a         5569 c         5158 g         4811 t
ORIGIN      
        1 tttttctcag cgatgcgggg tgtgcataat acgctttccc gctacagagt caagcatttt
       61 tttgcttttc tctgttgaga ttctcaggag aaccccgctg acccggcggc gtgtttgccg
      121 ttattccgtg tcagtggtgg cgcattatag ggagttattc cggcctgaca agaggaaatt
      181 taaaataact ttctgaccgc gcatttttta ttctttatgc ttatttcagc gtcggtttgt
      241 tggttaactg ggcgatttct cgggcgaaat tcgccacctg ctcccaatcg gtatagacaa
      301 cttctttgcg cgtatccgtt tcaccgcctg acatcttcat aatcagctta atcataaaac
      361 ggtcgtacca gcgataacgt gggtaacgca gcgccccggc aatgaccgcg cagcgatcgg
      421 gacgccattg tgaactcatc agaaacttgc gcgcgtagct gttggtctgt ggagtacgct
      481 tctccggttt gcgcgccacc aggtttacgg aataaaaggc gctcggcatc gaattcagtc
      541 gcgtcgcatg ttttttgaca aattcctgga acgcagagtg gtagtgacca tagcgaatag
      601 aagcaccaat gaccacacgg tcatagtttt tccattgtgg ttcttcaatg cggtgcacat
      661 tggcgacatc cgtctggatc cccagttctt tcagttccga agccaggtag gaggcaatct
      721 cgcgcgtttg tccgtccctt gttgagaaaa gaattaatgt tttcacgtat tactccatca
      781 ttcacgccag aaagtcgggg taaagagcac cagcaatgta aagacctcga gacgaccaaa
      841 cagcatgttg gcaatcagga tccatttagc caccgggttc atactggtaa agttatcagc
      901 aaccacgcca agccctggcc ccaggttatt caatgtcgca acaactgagg caaaggcaga
      961 aaaatcatcc acgcccgtgg cgataatcgc cagcatactg acaataaaca ccaatgcata
     1021 ggcggagaaa aatccccaaa cggcttcgag gatacgttcc ggcagtgcgc gattccccag
     1081 cttaatgcta tagacggcgt tcggatgcac cagtcgtttc agctcacggt tcccctgctt
     1141 aaacagcagc aggatgcgga tcactttcag gccaccgccc gttgacccgg cgcaaccgcc
     1201 gataaaagct gaacataaaa gcagtaccgg caaaaagagc ggccagcggg caatgctgtc
     1261 agtcgtaaac ccggcggttg tcgccatcga taccacctgg aaaaacgcct ggttaattgt
     1321 catcagcgcc gaactgtaga cattatgaaa ccacagtacg agtgtacaaa taaccaccag
     1381 cgtaaactgt acgccgataa acatgcgaaa ttccggatcg cgccaataaa ccttcagact
     1441 acgcccactt aacagtgaaa agtgcagacc gtagttacaa ccggagatca gcaggaagat
     1501 agcaatgata gtgttaatag tcggactgtc gaaataaccg atactggcat catgtgtcga
     1561 gaagccgcca atagcgatag tcgcaaagct atggccgatg gcatcaaagg catccattcc
     1621 ggcaaaccac aacgccagcg cacaggcgac ggtcagcaag acataaatca accacagggt
     1681 tttcgccgtt tccgcaattc gcgggcgcat tttgttatct ttcagcgggc cgggcatttc
     1741 tgcgcgatag agctgcatcc cacccacgcc gaggataggc agtatcgcaa ccgctaacac
     1801 gatgatcccc atcccgccaa accattgcag catctggcga taaaagagga tggcatgagg
     1861 gagcgaatcc agccccacca gcgtagtggc cccggtggtg gtcaggccag agaaagattc
     1921 aaaaaacgca tcggtaatcg tgaggttcgg gctttccgag aagataaaag ggagcgcacc
     1981 gacactaccc agcacggtcc aaaacagcac cactatcaga aacccctcac gggatttcag
     2041 ttcgcccttc tctttgcggt tcggccacca cagcatagag ccaatggcga gggcgacaaa
     2101 aaaggtctgg gtaaaagcgc ggcccgctcc atcccggtag atgagtgcta ccagcccagg
     2161 gataatcatg gtccctgaaa ataagatgac cagtagtcca acgattcggg taatggcgcg
     2221 aaaatgcatc tctgccgctt ccttagttct gcaaaacgaa gtggggatta ttcttcaatc
     2281 gctaacaatt gcaatgaacc acggctaaaa tccgccagct ttgcggaaaa ttcagccact
     2341 ttcgccgccg gaagcgccac ccgcagcaga acgaatgcct gataatcact gttgataatt
     2401 ttgccgtcac actgccccag caacgcttca atgccggtta actgactata ttcacattgc
     2461 aaagtatatt cggttaatgg cgtcttgcgt tgggtcgtta gctggcgcag cgcctgattc
     2521 acgccgccgc catacgcttt cactaaccca ccggtgccaa gcaatatgcc gccgtagtag
     2581 cgcactacca cagcggtaat ttccccgacg ccgctgccca ttagctgggc gagcatcggt
     2641 ttacctgccg ttcccgccgg ctccccgtcg tcagagaaac ccagctgttg agaatcatcc
     2701 ggcgcacccg ccacccacgc cacgcaatgg tggcgggcat cggggtgttc tgcccgcacc
     2761 gattcaacaa acgctttcgc cgcctcaacg ccatcggtat gcgccaacat cgttatgaag
     2821 cggctctttt tgatctcttc aacgaccgtg accggtgccg caggaattaa ccagctttcc
     2881 atcacgccag tttcagatcc cgggtcatgt tttccacgtt attttcgtgg atcaccacgt
     2941 tgtcttcgat acgaatgccg ctgaacggtt tcagtgcttc aattttctgc cagttgaagt
     3001 gcttgctgaa ctgcccttca cgccacggtg ccagtagcga ttcgatgaag tagatacccg
     3061 gttcgatggt taacaccatg cccggctgga gaatacgggt gcagcgcagg tacggatatt
     3121 ttgccggtgc cgcgaggtgt gtaccgctat catcctgcat aaaaccggct acgtcatgca
     3181 cctgcaggcc cagcggatgg ccgataccgt gcggcataaa cggtccggtg agatcgtttt
     3241 cgaccatcgc ttcttcactc atatcggtga tgatttgatg tttacgcagc aatttggcaa
     3301 tgcgctgatg gaactggagg tggtaatcca catagctgac gccagctttc atggtggcga
     3361 tcagcgcaag ttgttcatca tttacgtctt tcaccagctg tgcgtagtcg ttgtcgcttt
     3421 ttgccgacca ggtacgagtc aggtcagccg catagccgtt atattcggcc ccggcatcca
     3481 gcaggaagct gcgcatctct tccggtgcct gatgatccag tttggtgtaa tgcagcaccg
     3541 aagcgtgttc gttaagcgcc acaatgttgc tgtaaggtac gtcggtatca cgatgaccgg
     3601 tcgcggtcag ataggcgatg ttgatatcga actcgctcat gccagaacgg aacgcttctt
     3661 ctgccgcacg atgaccgttg accgccattt tctgcgcttc acgcatacag gccagttcgt
     3721 actcggtttt gaaggagcgg tagtaatgca ggtagtcgat cacccctttc gggttgatgt
     3781 tgctggcctc aatacccagt tgcagcgcac gttccggcac cggaccgata taaccgatat
     3841 tgccgcgtgc agcgggcagc aggctaccaa tgccatcggc tttcggcagt gcgatcactt
     3901 ccacatcttc agtccagaag gaggtcggca gcggttcgac gttgtgccag taatcaaccg
     3961 gcagatagaa ccacagtttc ggcttgttca cgccatccac cagcaaccag cagtttggca
     4021 cctgagttac cggcacccac gctttgaatt gcgggttcac tttaaacgga tagggatgat
     4081 cgtcgagaaa aacgttgaac agctcgccgg agtgaataag taatgcatcc agcttgaagc
     4141 gcgccagcgc atcgcgagtc cgttcttgta aggtagctat atgattttta tagagcgagg
     4201 ccagtgattc cattttttac ccttctgttt ttttgacctt aagtctccgc atcttagcac
     4261 atcgttcatc cagagcgtga tttctgccga gcgtgatcag atcggcattt ctttaatctt
     4321 ttatttgcat atttttaaca caaaatacac acttcgatgc atctggtacg accagatcac
     4381 cttgcggatt caggagactg acatgcttta caaaggcgac accctgtacc ttgactggct
     4441 ggaagatggc attgccgaac tggtatttga tgccccaggt tcagttaata aactcgacac
     4501 tgcgaccgtc gccagcctcg gcgaggccat cggcgtgctg gaacagcaat cagatctaaa
     4561 agggctgctg ctgcgttcga acaaagcagc ctttatcgtc ggtgctgata tcaccgaatt
     4621 tttgtccctg ttcctcgttc ctgaagaaca gttaagtcag tggctgcact ttgccaatag
     4681 cgtgtttaat cgcctggaag atctgccggt gccgaccatt gctgccgtca acggctatgc
     4741 gctgggtggt ggctgcgaat gcgtgctggc gaccgattat cgtctggcga cgccggatct
     4801 gcgcatcggt ctgccggaaa ccaaactggg catcatgccg ggctttggcg gttctgtacg
     4861 tatgccacgt atgctgggcg ctgacagtgc gctggaaatc attgccgccg gtaaagatgt
     4921 cggcgcggat caggcgctga aaatcggtct ggtggatggc gtagtcaaag cagaaaaact
     4981 ggttgaaggc gcaaaggcgg ttttacgcca ggccattaac ggcgacctcg actggaaagc
     5041 aaaacgtcag ccgaagctgg aaccactaaa actgagcaag attgaagcca ccatgagctt
     5101 caccatcgct aaagggatgg tcgcacaaac ggcggggaaa cattatccgg cgcccatcac
     5161 cgcagtaaaa accattgaag ctgcggcccg ttttggtcgt gaagaagcat taaatctgga
     5221 aaacaaaagc tttgtcccgc tggcgcacac caacgaagcc cgcgcactgg tcggcatttt
     5281 ccttaacgat caatatgtaa aaggcaaagc gaagaaactc accaaagacg ttgaaacacc
     5341 gaaacaggcc gctgtactgg gcgcaggcat catgggtggc ggcattgctt accagtctgc
     5401 gtggaaaggc gtaccggttg tcatgaaaga tatcaacgac aagtcgttaa ccctcggcat
     5461 gaccgaagcc gcgaaactgc tgaacaagca gcttgaacgc ggcaagatcg atggtctgaa
     5521 actggctggc gtgatctcca cgatccaccc aacgctcgac tacgccgggt ttgaccgcgt
     5581 ggatgttgtg gtagaagcgg ttgtcgaaaa cccgaaagtg aaaaaagccg tactggcaga
     5641 aaccgaacaa aaagtacgcc cggataccgt gctggcgtct aacacttcaa ccattcctat
     5701 cagcgaactg gccaacgcgc tggaacgccc ggaaaacttc tgcggaatgc acttttttaa
     5761 cccggtacac cggatgccgt tggtagaaat tattcgcggc gagaaaagct ccgacgaaac
     5821 catcgcgaaa gttgtcgcct gggcgagcaa gatgggcaag acgccgattg tggttaacga
     5881 ctgccccggc ttctttgtta accgcgtgct gttcccgtat ttcgccggtt tcagccagct
     5941 gctgcgcgac ggcgcagatt tccgcaagat cgacaaagtg atggaaaaac agtttggctg
     6001 gcctatgggt ccggcatatc tgctggatgt cgtgggcatt gataccgcgc atcacgctca
     6061 ggctgtcatg gcagcaggct tcccgcagcg gatgcagaaa gattaccgcg atgccatcga
     6121 cgcgctgttt gatgccaacc gctttggtca gaagaacggc ctcggtttct ggcgttataa
     6181 agaagacagc aaaggtaagc cgaagaaaga agaagacgcc gccgttgaag acctgctggc
     6241 agaagtgagc cagccgaagc gcgatttcag cgaagaagag attatcgccc gcatgatgat
     6301 cccgatggtc aacgaagtgg tccgctgtct ggaagagggc attatcgcca ctccggcgga
     6361 agcggatatg gcgctggtct acggcctggg cttccctccg ttccacggcg gcgcgttccg
     6421 ctggctggac accctcggta gcgcaaaata cctcgatatg gcacagcaat atcagcacct
     6481 cggcccgctg tatgaagtgc cggaaggtct gcgtaataaa gcgcgtcata acgaaccgta
     6541 ctatcctccg gttgagccag cccgtccggt tggcgacctg aaaacggctt aaggagtcac
     6601 aatggaacag gttgtcattg tcgatgcaat tcgcaccccg atgggccgtt cgaagggcgg
     6661 tgcttttcgt aacgtgcgtg cagaagatct ctccgctcat ttaatgcgta gcctgctggc
     6721 gcgtaacccg gcgctggaag cggcggccct cgacgatatt tactggggtt gtgtgcagca
     6781 gacgctggag cagggtttta atatcgcccg taacgcggcg ctgctggcag aagtgccgca
     6841 ctctgtcccg gcggttaccg tcaatcgctt gtgtggttca tccatgcagg cactgcatga
     6901 cgcagcacga atgatcatga ctggcgatgc gcaggcatgt ctggttggcg gcgtggagca
     6961 tatgggccat gtgccaatga gtcacggcgt cgattttcac cccggcctga gccgcaatgt
     7021 cgccaaagcg gcgggcatga tgggcttaac ggcagaaatg ctggcgcgta tgcacggtat
     7081 cagccgtgaa atgcaggatg cctttgccgc gcggtcacac gcccgcgcct gggccgccac
     7141 gcagtcgggc gcatttaaaa atgaaatcat cccgaccggt ggtcacgatg ccgacggcgt
     7201 cctgaagcag tttaattacg acgaggtgat tcgaccggaa actaccgtgg aagccctcgc
     7261 cacgctgcgt ccggcgtttg atccagtaaa cggtacggta acggcgggca catcttctgc
     7321 actttccgat ggcgcagctg ccatgctggt gatgagtgaa agccgcgccc atgaattagg
     7381 tcttaagccg cgcgctcgtg tgcgttcgat ggcggtcgtt ggttgtgacc catcgattat
     7441 gggttacggc ccggttccgg cctcgaagct ggcgctgaaa aaagcggggc tttctgccag
     7501 cgatatcggc gtgtttgaga tgaacgaagc ctttgccgcg cagatcctgc cgtgcattaa
     7561 agatctcggg ctaatggagc agattgacga gaagatcaac ctcaatggtg gtgcgatcgc
     7621 gctgggtcat ccgctgggct gttccggtgc gcgtatcagc accacgctgc tgaatctgat
     7681 ggaacgcaaa gacgttcagt ttggtctggc gacgatgtgt atcggtctgg gtcagggtat
     7741 tgcgacggtg tttgagcggg tttaaccact tgccggatgc ggcgtgaacg ccttatccgg
     7801 tctaccgatc ctgcaccaat gtaggcctga taagacgcgc cagcgtcgca tcaggcatcg
     7861 tgcaccgatt gccggatgcg acatagatct aaatgccact gaataaagtt ttagttgccg
     7921 ttcttcccgc ctgtcagggg cgggtttttt tatatctcag ataaatgcaa acgcatcgcc
     7981 aaacagacga tcttcccgcg cattacgctc actgcaaaac aggtcacgag caattttcgc
     8041 catctcaaaa cgtccggcaa tatagatatc atgctctgcc agcgtaccat gatcctgcaa
     8101 gaccgccgtt aacacggtgc cagtacgccc acgccagccc gcttccggtt gttcaaccac
     8161 cggcaccaca cgcaggccag gatgcttcag cgaaagcgcc tcaagctcgg agagatcata
     8221 aagatgttgc tcctcacgcc caccccagta aatggtgata tcgcgattgg gattacgcgc
     8281 caacgccgtc aataaaatcg agcgcgcata ggagaacccg gtgccgcccg caatcaaaat
     8341 catcggacgc tcttcatcat cgcgcagcca cgcttctccg tagggaatat cgaccacgat
     8401 ttgataatct ttgaggatgc ggtccatgac tgctttcgcg taaaggttga tttcagaagc
     8461 gccaatatgc agctctataa accctttttc atccggcgtc gaagccattg aaaacggacg
     8521 tttgtcgcgc tcatccatca ctaccatcaa atactgacca gcacgaaaag aaaaggccgc
     8581 gtctggcacg atgcggacac gatatacggt atccgtgata gcttctaccg aggtcacttt
     8641 acagcttaag gttgtcatgc gctttctctg tcggatcgat aaatagggca aaacaaacgc
     8701 gcatcaggcg cttttaccgt tgttaaaaat agccagttca tcccagatgg cgtcaatatg
     8761 cgcgacaaca tctggatctt ttttgatggg acgtccccat tcacgctggg tttcccccgg
     8821 ccatttattc gtggcatcca gccccatttt tgaacccagc ccggagacag gcgaggcaaa
     8881 atccagataa tcaataggcg tattttctac cagaacagta tcccgcgccg ggtccatacg
     8941 ggtggtaatc gcccaaatca catcgttcca gtcgcgtgcg ttgacgtcat catcgcaaac
     9001 gatcacaaat ttagtgtaca taaactggcg taagaacgac cagacgccca tcatgacgcg
     9061 cttcgcgtgt ccggcgtact gttttttgat cgtcactacc gccagacgat aagaacagcc
     9121 ttccggcggc aggtaaaaat cgacaatttc cgggaactgt ttttgcagaa tcggtacaaa
     9181 cacttcgttc aacgccacgc ccagtaccgc gggctcatct ggcggacgcc cggtataggt
     9241 ggaatggtaa atcgcatctt cacgctgggt aatatgcgtc acggtaaata ccgggaaact
     9301 atcgacttcg ttatagtaac cggtgtggtc gccatacggc ccttccggcg cagtttcgcc
     9361 ttgttcgata tacccttcca gcacaatctc cgcactggcg ggcacttcaa ggtcattgga
     9421 gatacacttc accacttcgg tcttggtacc gcgcagcaat ccggcaaacg catactctga
     9481 aagtgtatcc ggaacggggg tgactgcacc gagaatcgtg gcgggatcgg cacccagcgc
     9541 cacagaaacc gggaaacgtt cgcccggatg cgccgcacac cactcctgat aatccagcgc
     9601 gccgccgcga tgcgacagcc agcgcataat cagtttgttt ttaccaatca gctgctggcg
     9661 ataaatgccc agattctgcc gctctttatg cgggccgcgc gtcactgtca gcccccaggt
     9721 aatcagcggt gcggcatctt ccggccagca ggtcataatg ggaatgcgat tgagatcgac
     9781 gtcatcgcca gagacgattt tttgttggca gggcacacca cgcagccgct ttgtcggcat
     9841 gttcaatact tgcttaaact gcggcagttt atcaaacagg tcgcggaaac cttttggcgg
     9901 ctccggctct ttcagaaacg ccaataattt accaacttca cgcagcgccg aaacatcttc
     9961 ctgtcccatg cccatcgcca cgcgctttgg cgtaccgaac aggttgcaca gcaccggcat
    10021 tgagtagcct ttagggtttt cgaacaacag cgcaggccca ccggcacgca aagtgcggtc
    10081 agcaatttca gtgatttcca gatgcggatc caccgggagc gtgatacgtt ttagctcacc
    10141 ctgctgttca agcagcgtca agaagtcgcg taaatcgtta tatttcatgg cgtccattgt
    10201 agcctcttaa tctacgccca ttatacggcg ttcatctttg cgatgctgta aatttgttaa
    10261 attagcgtga actctgacgg tataacgcaa accggggaat ataattaact tagcgtaaag
    10321 cttttgctat ccttgcgccc cgattaaacg gataagagtc attatgcaat cctggtattt
    10381 actgtactgc aagcgcgggc aacttcaacg tgcccaggaa cacctcgaaa gacaggctgt
    10441 gaattgcctg gcaccgatga tcaccctgga aaaaatcgtg cgtggaaaac gtactgcagt
    10501 cagtgagcca ttgtttccca actacctgtt tgtcgaattt gatccagaag tgattcatac
    10561 cacgactatc aacgcgaccc gcggtgtcag ccacttcgtg cgctttggcg cgtcgccagc
    10621 gatagtccca tcggcggtga ttcatcagct atcggtatat aaaccgaaag acattgtcga
    10681 tccggcaacc ccttatccgg gtgataaggt gattattacc gaaggcgcgt tcgaaggctt
    10741 tcaggccatt ttcaccgaac ccgatggtga ggctcgctcc atgctattgc ttaatcttat
    10801 taataaagag attaagcaca gtgtgaagaa caccgagttc cgcaaactct aaaacgcaat
    10861 cccaaacagt gttttgacat tggcatccgt ggtggcagcc agccatgcgg catcttctcc
    10921 acgccagtgc gcaatacgtt gcaaaatatg gtgcagatgg gctggctcgt tgcgccggga
    10981 tgatggcttt ggcgtgaaat cgcgcgggag cagatacggc gcatcagttt cgatcagcaa
    11041 tttctccgcc ggaatcaacg gcaacaattc ccgcagctcc agcccgcgtc gttcatcgca
    11101 aacccaaccg gtaatgccga tataaattcc acgcgccacg cacgcctgca tctcttcgcg
    11161 tgtgccggta aagcaatgaa gaaccgcacc aggcagttta tccagccacg gctccagcaa
    11221 tgtcataaac cgctcgtggg catcgcgaca gtgcataaat accggcatgt ttaattctgc
    11281 ggcaatgcgt agctgagcaa caaaagcgcg ttcctgctct tccggcgtcg aaaagttgcg
    11341 gttaaagtcg agaccacatt caccaatcgc caccacttct ggctgcgcgg ccagctcaat
    11401 aatcgcttct tcagtcgcag cttgccactg gctgctgtcg tgaggatgta cgcccgccgt
    11461 tgaccaacag gacgaatact gacgcgccag cttttgcgcc tgctggcttt cacgcaggtt
    11521 agtgccggtg atgagtagcc cattaactcc cgcgtcaaaa gcgcgcgcta caacatcatc
    11581 acggtctttc gcaaattgcg aactggtcaa attaacgccg atatcaaaca tcctgtactc
    11641 catatgacaa ccgccctgac gggcggttga atttattctt cagttttttc gctttctgct
    11701 tcagcgtcgt tttcctcttc ccgatttcgc cctttaccaa cgtaaaagcg tgagaagaag
    11761 acaccgattt caaacagaca gtacatcggg atcgccaata gcgtttgcga gaagacatcc
    11821 ggcggcgtca gcaacatccc gacaacgaat gcaccaacca gcacatacgg gcgttttttg
    11881 cgtaagtctt ctggcgaggt aatccccatc cagcacagca gcacaattgc caccggcact
    11941 tcaaaggaga caccaaacgc cataaacagc gccataacga agcttaaata gctggcgatg
    12001 tcggtggata cctgcacccc ttccggcgcg gtattggcaa ggaagccaaa tgccagcgga
    12061 aagaccacaa agtaggcgaa tgccatgccg atataaaaca gcagagagct ggaaaccagc
    12121 agcggcacca ccaggcgacg ttcatgctta tacagcgctg gggcgataaa tgcccacacc
    12181 tgatagagaa tcaccggcgc tgacagaatc agcgacacca taaaggtcag cttgatcggc
    12241 gtaaagaacg gcgaggccac gtcggtggcg atcatcgttg aaccttgcgg caactgcttg
    12301 atcaatggcg cggataccag gtgatagatg tcattggcga aatagaccag acacaggaat
    12361 atcacgatca ccgcgataat gcagttcagc agacgcttac gcagctcaat tagatgcgtg
    12421 ataagcggtt gagtatcttc tacagacatg tttacggttt atcactcgac gaaggggaag
    12481 gtgcagcggt tttcggttca gcgtccgcag caggttttac caccggctct ggcgtggttt
    12541 ctggcttctg ttccggcgaa ctggcctgcg tttgtgcagc ggcaggcgtt acgccctcat
    12601 gcgcagcttc attatctttc accaccgggt tatggatggt gtgcgcttca tcgctcgcct
    12661 tttctggatc gtttgcaacg taggaacgct tcatcgactc cgcggcctgg cgtagttcat
    12721 ccatcgacgc tttcagttcg ggcgtcaggt tagtgaggct cgccttttca acctttttca
    12781 gactgtcctg aaactcctgg agttttaact cctggatcag ttcgttctgc accgttgtcg
    12841 ccagtgaacg caacgcgcga atccagcccg ctaccgtttt taccgccaca ggcagtcgtt
    12901 gcggccccag aacgacgagg ccgatgatga acaccaatag cagttcgcta aaaccgatat
    12961 caaacacgga ttacacctgc tctttatcgt ggcgcttcgc gtcttctgtt ttagcctgtt
    13021 cctgattcgt atccgcctgc ttatcggcga tagttttcgc agtaaaatca gcatcctgac
    13081 tggttttatc ctgctttggt tcatcatcgc tcattgcttt tttaaagcct ttgatcgacg
    13141 caccaagatc ggaaccgatg gagccgagct ttttggtgcc aaaaagcagt acaacgatga
    13201 cggcaataat caataactgc caaatactga taccacccat acatgttcct ctgtggtaga
    13261 tgatgattaa acaaagccgc attatacgtt acacggcccc gccttgagcg atgaaaaaat
    13321 cagcgtgttt tgcgccaacc gacaaaccag gcgatcagac cacctgccat taaccagccg
    13381 ggcatcagcc cccactcagg tcggctgacc aacaagaatg tgccacttaa tactaacgta
    13441 gcgccaattc cgagaaaata acgcgattgt ccctgacgta catgatttga ctgaagctcg
    13501 cgggcaatct tatcaacact gtgctgtaaa tacttgccct ggcgcaaact gtcgtaaacc
    13561 aattcaggca gttctggcat tttttcgacc cagaacggcg ctttttcttt aaatgctctc
    13621 accagcgcag gaataccgac ctgatcttta atccacgact ccaggaaagg cttcgctgtt
    13681 ttccataaat cgagctgcgg ataaagctgg cgtcctaccc cttcgacata gagcagggtt
    13741 ttctggagta acaccagttg cggctgcact tccatattga agcgacgcgc cgtattaaac
    13801 agatttaaca gtacatgtcc aaacgaaatt tcggccagcg gtttctcaaa gataggttca
    13861 cagaccgtac gaatggcaaa ttcgaactct tcaacgttgg tatctggtgg cacccagcct
    13921 gaatcgacgt gtagctctgc cactttgcga tagtcgcgat taaagaaggc gataaagttt
    13981 tctgccagat agcgtttatc ttctttgttt agcgagccaa caatcccgca atcaatgccg
    14041 atatatttcg ggttttccgg gtgttcatag cttacgaaga tgttgccagg gtgcatatcg
    14101 gcatggaaaa agctgtcgcg aaagacctga gtgaagaaca cctgcacgcc gcgttccgcc
    14161 agcaatttca tgttagtgcc gtttttctcc agcgccgcaa catcagacac cggaatgccg
    14221 taaatgcgct ccatcaccat catcccttca ctacaatagt cagggtaaac ttccgggatg
    14281 tagagcatcg ggctgtcttc aaaattgcgc cgaagctgaa tggcgttggc agattcccgc
    14341 agcaaattca gttcatcaat caaggtcttt tcgtactcgc gcaccacttc ggttgggcgc
    14401 agacggcgac catccggcag caaacgcggc acccagcgag ccagacggta gataagtttc
    14461 agatccgctt taatgaccgg caaaatatcc gggcggatga ctttaatcac cacctcttta
    14521 ccattcgatt tcaatcgcgc ggtatgaacc tgggcgatag aagcagaagc cagcggcttg
    14581 atttcaaaat cgtcaaacca cgcttctacc ggcaagccgc ccattgcagc ttcaatctgc
    14641 tgcttcgcca gcttgccatc aaacggagca actttgtcct gcaataacgc cagctgatcg
    14701 gcaatatgcg gtggaaaaag atcgcggcgg gttgataaca tttgcccgaa cttgatccaa
    14761 accggcccca gttcttgcag ggccagtcgt agtcgctcac ctaaaagttt gtctttatgc
    14821 cgatttggca tccagaataa tgagtatcgc catagccgta gcggcagggt gatacgcatt
    14881 ttggggatca gttcatcaag tccgtagctt aaaaaagtgc gaatgatgaa atataggcgc
    14941 cgtacttcac ctggcgtcat ttagcctcca gtttttccag ccgtttggtc agggcatcaa
    15001 cagcacgctc gacggcagcc gtctcttccg caaaccaggc cacttcaagc ggaccgggtg
    15061 ccatacgcca ctcttcagta atggcttccg ccacataacg ttgctggcgc ttaatgccgt
    15121 gatgcaggaa ctttgcgcct ccgcgcatgg ctttgctgat tccttcagcg gcgatatcac
    15181 cggtataagg ggccagcagt tccgcagggt cgaactctgc cagatctgcc agcgcaacga
    15241 agttttgcac cacctgaata tcgccctgca cttccagctc accactgcga atcagtgcgg
    15301 taagctgctg gcgatcgcga agtttcggca acacactggc gtaggcgata acggtgcagt
    15361 cagcatcgcc tgcccattcg cccagtacat caacctggcg ttcgctgaac accagaatca
    15421 atgacgtcga aaagcctttt acctccacgc gcaatacttt acccagcaga cgcgagcggg
    15481 ctgttttcag cgcgggtgag cgatacagga aggtgttgag cagactttca attcctgccg
    15541 tcactaaagg tttaaaaggc atttccggtc tcctgtcaga acttataacc acgatgcagc
    15601 gccacaaccc ctgccgtcag attgtagtag tcgacacttt cgaatccggc atcctgcatc
    15661 atggctttca gggtatcctg atcgggatgc atacggatgg attctgccag ataacggtag
    15721 ctgtcggcgt cgttcgcgac cagtgagcca atacgcggca gcacatggaa ggagtatgca
    15781 tcataggctt tgctcagcgg ctcgataatt ggcttcgaga actcaagcac cagcaggcgg
    15841 ccgccgggtt tcagcacgcg atacattgaa cgcagtgctt tatctttgtc ggtgacgtta
    15901 cgcagaccaa acgaaatggt gatgcaatca aaggtgttat ccgggaacgg cagcgcctca
    15961 gcgttcgcct gaacatactc aacgttgcca atcacaccga tattacgcag cttctcgcgt
    16021 cccattttga gcatggattc attgatatca gcaaggacca ctttgccagt ttctccgacc
    16081 aggcgggaga atttcgctgt caggtcgccg gtgccaccag ccagatccag cacggtctgc
    16141 ccacggcgta cgccgctgca atcaatcgtg aatcgcttcc acaaacgatg aataccaaat
    16201 gacatcaaat cattcatgac atcgtatttt gatgccacgg aatggaaaac gtgggcgacc
    16261 atatccgctt tttgttcctt cgcgacggtc tgaaaaccaa agtgcgtcgt ttcttgtgac
    16321 ttatccacca tctcaatgcc tgctcatcaa aaaattgttc cagaagtgta acagattggg
    16381 cgtcgatacc ctagatttct acccggctta actaccccta atgggctagc gcgactgctg
    16441 attatattca tcatcgcgtt gataagcttc atcattcggc tgctccggaa ccgaccgaag
    16501 tcgatactct tcatcctggc tcaccgcctg ttcagccaaa tccggattaa tctcgcgttt
    16561 aatttctact cctaaaccgc gaaacgcttc tgcctgcgcc agcacatttc cgcgacctga
    16621 agagagtttt ttcattgcct ggcggtagtt atcctgcgct ttgtcgagac tttgaccaat
    16681 cgcggacatg tcatcgatga acaaacgcat cttgtcgtac agcttgctgg cacgatcggc
    16741 gatttgctgg gcgttgcggc tttgatgctc ataacgccac aggttggcaa tagtacgcaa
    16801 cgccacctgc agcgtagtcg ggctaaccag catgatattg tttttcaacg cttcggtgat
    16861 cagctccggc tggcggtcaa gcgccagtaa aaaagcgggt tcaacgggaa taaacatcag
    16921 cacgtaatcc agagttcgca gccccggcag ctgttgataa tctttgcgtc ccagcaaacg
    16981 gatatggtta cgcaccgacg cgatatgttc ctgtagcgcg ctttcgcggg tgtagtcgtc
    17041 ttcggcgtta aaatagcgtt cataggcgac cagcgtcatt ttggcgtcga tcaccacatc
    17101 ttttccctgc ggcagccgca cgatgacatc cggctgcatc cgcgagcggg cgtcattttc
    17161 gatgctgacc tgggtttcat attcataccc ttcacgcaga ccggaagcct ccagcacccg
    17221 cgtcaatact acctcgcccc agttgccctg ggttttattg tcgcctttca gcgcgcgcgt
    17281 caggttgatc gcttcctggg ccatttgcgc gttgagttgc tggagattgc gaatttcgtg
    17341 ggtcagggta tggcgttctt gtgcttcttt accgaagctg tcctgaacct gacggcggaa
    17401 accgtccagt tgttcacgta gcggcgacaa caggctgttc agactctgac ggttttgctc
    17461 atcaacccgg caattgctgt gctcaaaaat acggttggcg aggttttcaa actgctcact
    17521 gaggcgctgc tcgctgttaa tcatctggcg aattttatcg tcagcatgtt gctgtgcggc
    17581 ttccatccgc gtggttactt cacgcagatc ggcctccaga gaggtgttaa tactttgcag
    17641 gctgcgcact tcgttattga gtaactcgca ctctgcacgc cagtgctcgc tttgggtaat
    17701 ttgttgtttt gccgcgctta actccgcgac catctcttca cgttcagcta attgctcggc
    17761 tttttgctgc gcatgttgat aactggcaaa cagccagcca attgccacac ccaccaacgc
    17821 aataactgcg taaaccatga ttgagaaatc cacaacgcct cctgacgcaa caacttaccc
    17881 gcacaaaata gaattgtgct gtacaaacgt ccagttggaa aggcatttcc tgcgaggcgc
    17941 tacgcaaaaa tacaaaaggc cgaacgcgtc ggccttcaga caggagaaga gaattacagc
    18001 agacgacgcg ccgcttccac cacgattttc accgcttggc tttcagtttg tttcatcgtc
    18061 tcagcattcg ggatctcttg ctgggtgcgg ttaacgataa cacccgctac cataccggca
    18121 cgcaggccct gacttgcaca catggtcagc agggttgcag attccatttc atagttcatt
    18181 acgcccatcg cctgccactc ttccatagaa cctttaaagt gacgaactac gcgaccagag
    18241 taagtatcgt aacgttcctg gcctgggtag aaggtatcag aagaagctgt cacgccaacg
    18301 tgagttgtcg cgccaatgga tttcgcagct tcaaccagcg cagtcgtaca ttcgaaatca
    18361 gcgacagccg ggaattccag cggtgcgaag tgcaggctcg cgccatccag acggacagac
    18421 gccgtggtaa ccaggacatc acccacatta atatgcggct gaatagcgcc cgttgtaccg
    18481 atacgcagga aggtgcgaat gcccagctgt gccagctctt caacagcaat agaggtagac
    18541 gggccgccga taccggtaga gcagacgata acaggtttac catccagctc tgcacgccag
    18601 gtggtgaatt cgcggtgaga tgccagctta accggcttat ccatcagcgc ggcgatcttt
    18661 tccacacgat ccgggtcgcc agggacgatg gcaagcgtag ccccttgtaa atcgttttta
    18721 gtgaggccga gatgaaaaac atcagacttg gacatataca actcctctgt gaatcggttt
    18781 agtcagaaga agcaaaaaga cactttaccg aagggtttaa cattttttcg tgatactcat
    18841 caccatgacg caaatgcgtt gcataaattt acccaccaaa agtgatgcaa atcacataaa
    18901 tcactcttca ttctgcagga ctgcataaaa gatgagccga ttcaggcaat gtgatttgtt
    18961 gcatgctgac tatagttaac attgcgcaac atttttataa gggtacggag aataccatgg
    19021 caacaacaca acaatctgga tttgcacctg ctgcatcgcc tctcgcttcg accatcgttc
    19081 agaccccgga cgacgcgatt gtggcgggct tcacctctat cccttcacaa ggggataaca
    19141 tgcctgctta ccatgccaga ccaaagcaaa gcgatggccc actgccagtg gtcattgtag
    19201 tgcaggaaat ttttggcgtg catgaacata tccgcgacat ttgtcgccgt ctggcgctgg
    19261 aggagtatct ggctatcgca cctgaacttt acttccgcga aggcgatccg aatgattttg
    19321 ccgatatccc cacgttgctt agcggtctgg tagcaaaagt gcctgactcg caggtgctgg
    19381 ccgatctcga tcatgtcgcc agttgggctt cccgcaacgg cggcgatgtt catcgtttaa
    19441 tgatcaccgg attcagctgg ggtggacgta tcacctggct gtatgccgcg cataatccac
    19501 agctaaaagc cgcagtggcg tggtacggca aactgacggg cgacaagtcg ctgaattcac
    19561 cgaaacaacc tgttgatatc gcaaccgatc ttaacgcgcc gattctcggc ttatatggtg
    19621 gtcaggataa cagcattccg caggagagcg ttgaaaccat gcgccaggcg ctgcgggctg
    19681 ctaatgcgaa agcagagatt atcgtgtacc cggacgccgg gcatgcattc aacgctgatt
    19741 atcgcccgag ctatcatgcc gaatctgcga aagatggctg gcagcgtatg ctggaatggt
    19801 ttaagcagta tggtgggaag cggagttagt ttcctcttag tctatatttg agatggtgag
    19861 tgaacgagtg cgttttgctg ccatctctgt cccccaaaaa ataatcagta tgaattgatt
    19921 ggagattacg actccgctat ttgaccttaa gaaagtcggc aagtcatagt cataaatgag
    19981 tctcttcaat ggaagacacc ttagagattt accatctact cccattcaca aacaaacatt
    20041 aattattatc aacacattca cattaattat aaatcatctc agaccttcct gataaaaaga
    20101 tattaaagtg aaacattttg tttttcacat tttagttcat cacttttagg cgtaaataaa
    20161 ggtaaaaaaa acaacaatac tatttctctt tcacaaaaga attaacaaaa ggttttttaa
    20221 ggatgagtga tattatttac ttgaccataa ccggagaaca acaaggatgt atttcctctc
    20281 tttgtggaac gagcgcatca ataggtaatc gctggcagat tggccatgaa gatgaaatct
    20341 tcgcgttctc gctctctaat agtattacga atgcaggcaa agggtcacaa ttgcatggcc
    20401 ttagtttctg taaattctta ttaacgctat taacaataac gagcagttgt tcatggcgtt
    20461 tgacttctat cggatcaata gatttggtcg atgggagaaa tattacaaca ttcaactccg
    20521 cggcgcgct
//
LOCUS       DADMHC010000060        19889 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.060, whole genome shotgun sequence.
ACCESSION   DADMHC010000060 DADMHC010000000
VERSION     DADMHC010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19889)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19889)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19889
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.060"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(82..879)
                     /locus_tag="JNZ57_001811"
     CDS             complement(82..879)
                     /locus_tag="JNZ57_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY8828051.1"
                     /translation="MSAGQRKEQKLIPVERRQIILEMVAEKGIVSIAELTDRMNVSHM
                     TIRRDLQKLEQQGAVVLVSGGVQSPGRVAHEPSHQVKTALAMTQKAAIGKLAASLVQP
                     GSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIANYLLDNSNCTIIHTGGAVCRENR
                     SCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVKRAIASASRQRVLVCDA
                     TKYGQVATWLALPLSEFDQIITDDGLPESASRALAKQDLSLLVAKNE"
     gene            1045..1953
                     /locus_tag="JNZ57_001812"
     CDS             1045..1953
                     /locus_tag="JNZ57_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HAY8828052.1"
                     /translation="MKTGSEFHVGIVGLGSMGMGAALSCVRAGLSTWGADLNSNACAT
                     LKEAGACGVSDNAATFAEKLDALLVLVVNAAQVKQVLFGETGVAQHLKPGTAVMVSST
                     IASADAQEIATALAGFDLEMLDAPVSGGAVKAANGEMTVMASGSDIAFERLAPVLEAV
                     AGKVYRIGAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAARAGIPLDVMYDVVTNAAG
                     NSWMFENRMRHVVDGDYTPHSAVDIFVKDLGLVADTAKALHFPLPLASTALNMFTSAS
                     NAGYGKEDDSAVINIFSGITLPGAKS"
     gene            1950..3211
                     /locus_tag="JNZ57_001813"
                     /pseudo
     CDS             1950..3211
                     /locus_tag="JNZ57_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001649192.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="four-carbon acid sugar kinase family protein"
     gene            3208..3846
                     /locus_tag="JNZ57_001814"
     CDS             3208..3846
                     /locus_tag="JNZ57_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HAY8828053.1"
                     /translation="MSDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNL
                     LATPTGSCLGNLDPQRLSKVAADGEWLSGDKPSKEVLFHLALYRNNPRCKAVVHLHST
                     WSTALSCLQGLDSSNVIRPFTPYVVMRMGNVPLVPYYRPGDKRIAQDLAELAADNQAF
                     LLANHGPVVCGESLQEAANNMEELEETAKLIFILGDRPIRYLTAGEIAELRS"
     gene            3851..4627
                     /locus_tag="JNZ57_001815"
     CDS             3851..4627
                     /locus_tag="JNZ57_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HAY8828054.1"
                     /translation="MPRFAANLSMMFTEVPFIERFAAARKAGFDAVEFLFPYDYSTLQ
                     IQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALALNCEQV
                     HVMAGVVPAGEDAERYRAVFIDNLRYAADRFAPHGKRILVEALSPDVKPHYLFSSQYQ
                     ALAIVEEVARDNVFIQLDTFHAQKVDGNLTHLIRDYAGKYAHVQIAGLPDRHEPDDGE
                     INYPWLFRLFDEVGYQGWIGCEYKPRGLTEEGLGWFDAWR"
     gene            4716..6080
                     /locus_tag="JNZ57_001816"
     CDS             4716..6080
                     /locus_tag="JNZ57_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family transporter"
                     /protein_id="HAY8828055.1"
                     /translation="MSTITLLYIALAGVIMLLLLVIKAKVQPFVALLLVSLLVALAAG
                     IPAGEVGKVMIAGMGGVLGSVTIIIGLGAMLGRMIEHSGGAESLANYFSRKLGDKRTI
                     AALTLAAFFLGIPVFFDVSFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPP
                     HPGPVATAGLLHADIGWLTIIGIAISIPVGIVGYFAAKIINKRQYAMSVEVLEQMQLA
                     PASEEGATKLSDKINPPGVALVTSLIVIPIAIIMTGTVSATLMPPSHPLLGTLQLIGS
                     PMVALMIALVLAFWLLALRRGWSLQHTSDIMGSALPTAAVVILVTGAGGVFGKVLVES
                     GVGKALANMLQMIDLPLLPAAFIISLALRASQGSATVAILTTGGLLSEAVMGLNPIQC
                     VLVTLAACFGGLGASHINDSGFWIVTKYLGLSVADGLKTWTVLTTILGFTGFLITWCV
                     WAVI"
     gene            complement(6174..7166)
                     /gene="rpoS"
                     /locus_tag="JNZ57_001817"
     CDS             complement(6174..7166)
                     /gene="rpoS"
                     /locus_tag="JNZ57_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoS"
                     /protein_id="HAY8828056.1"
                     /translation="MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEE
                     LLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLV
                     VKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN
                     QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNER
                     ITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLAR
                     RFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE"
     gene            complement(7229..8320)
                     /gene="nlpD"
                     /locus_tag="JNZ57_001818"
     CDS             complement(7229..8320)
                     /gene="nlpD"
                     /locus_tag="JNZ57_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein hydrolase activator NlpD"
                     /protein_id="HAY8828057.1"
                     /translation="MSAGSPKFTVRRIAALSLVSLWLAGCSDTSNPPAPVSSVNGNAP
                     ANTNSGMLITPPPKMGTTSTAQQPQIQPVQPVAQQPVQMENGRIVYNRQYGNIPKGSY
                     SGSTYTVKKGDTLFYIAWITGNDFRDLAQRNNIQAPYALNVGQTLQVGNASGTPITGG
                     NAITQADAAEQGVVIKPAQNSTVAVASQPTITYSESSGEQSANKMLPNNKPAATTVTA
                     PVTVPTASTTEPTVSSTSTSTPISTWRWPTEGKVIETFGASEGGNKGIDIAGSKGQAI
                     IATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEVKAGQKIATMG
                     STGTSSTRLHFEIRYKGKSVNPLRYLPQR"
     gene            complement(8460..9086)
                     /gene="pcm"
                     /locus_tag="JNZ57_001819"
     CDS             complement(8460..9086)
                     /gene="pcm"
                     /locus_tag="JNZ57_001819"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HAY8828058.1"
                     /translation="MVSRRVQALLDQLRAQGIQDEQVLNALAAVPREKFVDEAFEQKA
                     WDNIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCS
                     VERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMT
                     QLDEGGILVLPVGEEHQYLKRVRRRGGEFIIDTVEAVRFVPLVKGELA"
     gene            complement(9080..9841)
                     /gene="surE"
                     /locus_tag="JNZ57_001820"
     CDS             complement(9080..9841)
                     /gene="surE"
                     /locus_tag="JNZ57_001820"
                     /EC_number="3.1.3.5"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HAY8828059.1"
                     /translation="MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNS
                     LTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVI
                     YSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINV
                     PDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVD
                     EGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW"
     gene            complement(9822..10871)
                     /gene="truD"
                     /locus_tag="JNZ57_001821"
     CDS             complement(9822..10871)
                     /gene="truD"
                     /locus_tag="JNZ57_001821"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HAY8828060.1"
                     /translation="MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHI
                     LVRILKNGCNTRFVADALAKFLKIHAHEVSFAGQKDKHAVTEQWLCARVPGKEMPDLS
                     AFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYF
                     GAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQ
                     VVDGDALQLAGRGSWFVATTEELAELQHRVNDKELMITAALPGSGEWGTQREALAFEQ
                     AAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVV
                     RELINTTGDYAHIAE"
     gene            complement(10868..11347)
                     /gene="ispF"
                     /locus_tag="JNZ57_001822"
     CDS             complement(10868..11347)
                     /gene="ispF"
                     /locus_tag="JNZ57_001822"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HAY8828061.1"
                     /translation="MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHAL
                     TDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQA
                     PKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK"
     gene            complement(11347..12057)
                     /gene="ispD"
                     /locus_tag="JNZ57_001823"
     CDS             complement(11347..12057)
                     /gene="ispD"
                     /locus_tag="JNZ57_001823"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HAY8828062.1"
                     /translation="MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHA
                     LLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWV
                     LVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGL
                     WHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPE
                     DLALAEFYLTRTIHQENT"
     gene            complement(12076..12387)
                     /gene="ftsB"
                     /locus_tag="JNZ57_001824"
     CDS             complement(12076..12387)
                     /gene="ftsB"
                     /locus_tag="JNZ57_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HAY8828063.1"
                     /translation="MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNA
                     KLKARNDQLFAEIDDLNGGQEALEERARNELSMTKPGETFYRLVPDASKRAQSAGQNN
                     R"
     gene            complement(12581..12904)
                     /locus_tag="JNZ57_001825"
     CDS             complement(12581..12904)
                     /locus_tag="JNZ57_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3561 family protein"
                     /protein_id="HAY8828064.1"
                     /translation="MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPML
                     IYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALF
                     MWLLG"
     gene            complement(12954..13559)
                     /gene="cysC"
                     /locus_tag="JNZ57_001826"
     CDS             complement(12954..13559)
                     /gene="cysC"
                     /locus_tag="JNZ57_001826"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HAY8828065.1"
                     /translation="MALHDENVVWHSHPVTVQQRELHHCHRGVVLWFTGLSGSGKSTV
                     AGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLV
                     VLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFT
                     GIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS"
     gene            complement(13559..14986)
                     /gene="cysN"
                     /locus_tag="JNZ57_001827"
     CDS             complement(13559..14986)
                     /gene="cysN"
                     /locus_tag="JNZ57_001827"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysN"
                     /protein_id="HAY8828066.1"
                     /translation="MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLI
                     GRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYF
                     STEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGI
                     KHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSE
                     SMSWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQ
                     RVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAV
                     QSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNG
                     IGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPKNEAAVASSEFSA
                     FELELNALVRRHFPHWGARDLLGDK"
     gene            complement(14988..15896)
                     /gene="cysD"
                     /locus_tag="JNZ57_001828"
     CDS             complement(14988..15896)
                     /gene="cysD"
                     /locus_tag="JNZ57_001828"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HAY8828067.1"
                     /translation="MAQKRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVML
                     HLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINP
                     FVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDP
                     KNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLE
                     RDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNSQTLPEIIEEMLVST
                     TSERQDRVIDRDQAGSMELKKRQGYF"
     gene            16148..17185
                     /gene="iap"
                     /locus_tag="JNZ57_001829"
     CDS             16148..17185
                     /gene="iap"
                     /locus_tag="JNZ57_001829"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase isozyme conversion
                     aminopeptidase"
                     /protein_id="HAY8828068.1"
                     /translation="MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFF
                     PGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIA
                     AHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKN
                     TPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGV
                     KTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSV
                     EATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIM
                     LPLVKELAKAS"
     gene            complement(17392..17685)
                     /gene="cas2"
                     /locus_tag="JNZ57_001830"
     CDS             complement(17392..17685)
                     /gene="cas2"
                     /locus_tag="JNZ57_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated endoribonuclease
                     Cas2"
                     /protein_id="HAY8828069.1"
                     /translation="MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIW
                     QQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ"
     gene            complement(17685..18604)
                     /gene="cas1e"
                     /locus_tag="JNZ57_001831"
                     /pseudo
     CDS             complement(17685..18604)
                     /gene="cas1e"
                     /locus_tag="JNZ57_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311636.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated endonuclease Cas1"
     gene            complement(18601..19251)
                     /gene="cas6e"
                     /locus_tag="JNZ57_001832"
     CDS             complement(18601..19251)
                     /gene="cas6e"
                     /locus_tag="JNZ57_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000281458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein
                     Cas6/Cse3/CasE"
                     /protein_id="HAY8828070.1"
                     /translation="MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPSGKERQ
                     FLYRREELQGAFRFFVLSQERPAESDTFTIECRSFAPELCTGQQLCFNLRANPTICKA
                     GKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQ
                     LRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA"
     gene            complement(19233..>19889)
                     /gene="cas5e"
                     /locus_tag="JNZ57_001833"
     CDS             complement(19233..>19889)
                     /gene="cas5e"
                     /locus_tag="JNZ57_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cas5/CasD"
                     /protein_id="HAY8828071.1"
                     /translation="PSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWA
                     RDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRDYYTDAWWMVAVATTADAPYS
                     LEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNACDALCNAYQQYQDHFHKLKVS
                     LPKLQDECWWEGKHDGLVASKILRRRDVPLNRQQWLFGERTVNQGPWLSKEEPCTSQE
                     "
BASE COUNT         4691 a         5399 c         4988 g         4811 t
ORIGIN      
        1 cggtggagct gcatgacaag gtcatcgggc attatctgaa cataaaacac tatcagtaag
       61 ttggagtcat tacccaggcc attattcatt tttcgctacc agcaaagaga gatcctgctt
      121 cgccagcgcg cgactggcac tctccggcaa accgtcgtct gtaataatct gatcaaactc
      181 gcttaatggt aacgccagcc atgtcgccac ctgaccatat ttcgtcgcat cacagaccaa
      241 aactcgctgg cggctggcac tagcaatcgc ccgtttcacc gtgactttat cttccgctgg
      301 cgtagaaatc ccccgcacac tccatgacga tgcagaaata aaagcctgat caatcatcag
      361 gctgcgcagc atggtcgcag cggcttcccc gacacaggaa cggttttccc gacacactgc
      421 accgccagtg tgaataattg tgcaattact gttgtcgagc aagtagttcg caataacgaa
      481 atcgtttgtg accacagtca gtgactccat gtgaatcaga tgctgtgcta tcgctaacgt
      541 ggtcgttccc gcatccagat agatacaact tcccggctga acaagacttg ccgccagctt
      601 gccaatagcc gctttttgcg tcattgccag cgcagttttt acctgatgag aaggttcatg
      661 cgccacgcgt cccggagact ggacgcctcc ggacaccagc acaacggctc cctgctgctc
      721 cagtttttgt aaatcccgac gaatggtcat atgtgacaca ttcattctgt ccgttagttc
      781 agcaatactg acaatgcctt tttcagctac catctcaagg atgatttggc gacgctctac
      841 gggtatcaac ttttgctcct tcctttgtcc tgctgacatt ctacgctatt tgcctgcgaa
      901 acgtgcgcgg cgcaactaac gcttagttca cataaaataa cacgcaatgt taatttatgt
      961 gaatcagctc accatatcgt tatctcccag cgcttatatt cacaatatca aacaaaatat
     1021 cacttaaatt aacagggaga gcagatgaaa acgggatctg agtttcatgt cggtatcgtt
     1081 ggcttagggt caatgggaat gggagcagca ctgtcatgtg tccgcgcagg tctttctacc
     1141 tggggcgcag acctgaacag caatgcctgc gctacgttga aagaggcagg tgcttgcggg
     1201 gtttctgata acgccgcgac gtttgccgaa aaactggacg ctctgctggt gctggtggtc
     1261 aatgcggccc aggttaaaca ggtgctgttt ggtgaaacag gcgttgcaca acatctgaaa
     1321 cccggtacgg cagtaatggt ttcttccact atcgctagtg ctgatgcgca agaaattgct
     1381 accgctctgg ctggattcga tctggaaatg ctggatgcgc cagtttctgg tggtgcagta
     1441 aaagccgcta acggtgaaat gactgtcatg gcctccggta gcgatattgc ctttgaacga
     1501 ctggcacccg tgctggaagc cgttgccgga aaagtttatc gcataggtgc agaaccggga
     1561 ctaggttcga ccgtaaaaat tattcaccag ttgttagcgg gcgtacatat tgctgccgga
     1621 gccgaagcga tggcacttgc agcccgtgcg gggatcccgc tggatgtgat gtatgacgtc
     1681 gtgaccaatg ccgccggaaa ttcctggatg ttcgaaaacc ggatgcgtca tgtggtggat
     1741 ggcgattaca ccccgcattc agccgtcgat atttttgtta aggatcttgg tctggttgcc
     1801 gatacagcca aagccctgca cttcccgctg ccattggcct caacagcatt gaatatgttc
     1861 accagcgcca gtaacgcagg ttacgggaaa gaagacgata gcgcagttat caatattttc
     1921 tctggcatca ctctaccggg agcgaaatca tgatcaagat tggcgttatc gccgatgatt
     1981 ttaccggcgc gacggatatc gccagttttc tggtggaaaa cggtctacca acggtacaaa
     2041 ttaacggtgt tccaacaggt aaaatgccgg aagcaatcga cgcactggtg atcagcctga
     2101 aaacgcgctc ctgtccggtg gttgaagcca cacagcaatc gctggcggct ctgagctggt
     2161 tgcaacagca aggttgcaaa cagatctatt tcaaatactg ctctactttc tacagtacgg
     2221 cgaaaggtaa tatcggcccg gttaccgatg cattaatgga tgctctcgac acgccgttta
     2281 cggtcttctc tccggccctg tcggtcaacg gacgtacggt ttatcagggg tatttgttcg
     2341 taatgaatca actgctggcc gaatccggga tgcgccatca cccggtaaat cccatgaccg
     2401 acagctatct tccccgtctg gttgaagcgc aatccacagg gcgctgcggc gtcgtttcgg
     2461 cacatgtttt cgaacaaggt gtggatgccg ttcgtcaaga gctggctcgc ttacagcaag
     2521 agggctaccg ctacgcggtg cttgatgcgc tgaccgaaca ccatctggaa attcagggag
     2581 aagccttgcg cgatgcccca ctggtaacgg gcggttctgg tctggcgatt ggcctggccc
     2641 ggcagtgggc gcaagaaaac ggtaaccagg ctcgcgaagc agggcatccg ctcgctgggc
     2701 gcggcgtagt gctctccggt tcatgctctc aaatgaccaa ccgccaggtg gcacattacc
     2761 gtcaaattgc accagcccgt gaagttgatg tggcacgctg cctctcaacc gaaactctgg
     2821 ccgcttatgc acacgaactg gcagagtggg ttctgggcca ggaaagtgta cttgctccac
     2881 tggtttttgc caccgccagc actgacgcat tggcagcaat tcaacagcaa tacggtgcac
     2941 aaaaagccag tcaggcagta gaaactctgt tttctcaact agcggcgcgg ttagcagcgg
     3001 aaggcgtgac acgttttatt gtcgcaggcg gtgagacctc cggcgtagtc acacagagcc
     3061 tgggcataaa agggtttcat attggcccaa ccatttcccc cggcgtgccg tgggtaaacg
     3121 cactggataa gcctgtctca ctcgccctta aatctggcaa cttcggtgat gaagcctttt
     3181 ttcacgagcc caaagagagt ttttatcatg agcgatttcg caaaagtaga gcagtctttg
     3241 cgagaggaga tgacgcggat tgccagttca ttctttcagc gcggctatgc aaccggttcg
     3301 gctggcaatc tgtcgctgct tttacctgac gggaatttac tggcgacacc gacaggttca
     3361 tgcctgggca atctcgatcc gcagcggctt tccaaagtcg ccgcggatgg cgaatggtta
     3421 agtggtgaca aaccctcgaa agaggtgctc tttcatctgg cgctgtatcg caacaatccg
     3481 cgctgtaaag cggtggtgca tttgcacagc acatggtcga cggcgctttc ctgcctgcaa
     3541 gggctggaca gcagcaacgt tattcgtccg ttcacaccat acgtggtgat gcggatggga
     3601 aatgtcccgc tggtgcccta ttaccgaccg ggcgataaac gcatcgcaca ggatctggcg
     3661 gaactggcag cagacaatca ggctttttta ctggcaaatc atggcccagt ggtttgcggt
     3721 gaaagcctgc aagaagccgc caacaatatg gaagagctgg aggaaacggc aaaactgatt
     3781 tttattctcg gtgaccgccc gatccgttat ctgaccgcag gtgaaattgc ggaattaagg
     3841 agttaatgca atgcctcgtt ttgcagctaa tttatccatg atgttcaccg aagtgccttt
     3901 tattgaacgc ttcgccgcag cgcgaaaagc cgggttcgat gctgtggaat ttctgtttcc
     3961 ctatgactac tccaccctgc aaatccaaaa gcaactggag caaaaccatc tgacactggc
     4021 gctgttcaat accgctcccg gagatattaa tgcgggggaa tggggattat ccgcccttcc
     4081 cggacgtgag cacgaagcac acgcagacat cgacctggca ctggaatatg cattggcgct
     4141 caattgtgaa caagtccatg tgatggcagg cgtcgtgccc gctggcgaag atgctgaacg
     4201 gtaccgggca gtatttatcg ataatctccg ctacgctgcc gaccgctttg caccacacgg
     4261 caagcgaata ttagttgaag cactcagccc cgacgttaag cctcattatc tcttctccag
     4321 ccagtatcag gcactggcta ttgttgaaga ggttgcgcga gataacgtgt ttattcaact
     4381 agatactttt catgcgcaaa aagtagatgg caacctgacg catttaatcc gcgactacgc
     4441 tgggaaatat gcgcacgtac aaattgccgg actacctgat cgacatgaac cggacgatgg
     4501 agaaatcaac tatccgtggc tgttccgcct gttcgatgag gtgggatatc agggctggat
     4561 cggttgtgaa tataaacctc gtggcctcac cgaagaaggg cttggctggt ttgacgcctg
     4621 gcgctaattc gttaaatccc taattacaac gtacccatac atccccccat ctacggatgg
     4681 ggtaggttaa ctataacttt cagacagggt ttcccatgtc cacaattaca ttgttataca
     4741 ttgcgttagc tggcgtaatc atgctgttgc tgctggtcat caaggcaaag gtacaaccat
     4801 tcgttgctct gctcctcgtc agcctgttag tcgcacttgc ggcgggtata ccggcgggcg
     4861 aagtgggtaa agtgatgatc gccgggatgg gcggtgtgct tggttccgtc actattatta
     4921 ttggtctggg cgctatgctg gggcgtatga tcgaacactc tggtggtgca gagtcactgg
     4981 ctaattattt cagtcgcaag ttaggtgaca aacgaactat cgctgcgctg actctggcag
     5041 cgttcttcct cggtattccc gtcttctttg atgtcagctt tattattctt gcgccaatca
     5101 tttacggttt tgccaaggtt gccaaaatat cgccactcaa atttggcctg cctgtcgctg
     5161 gaatcatgct aactgttcat gtggcagtac cgccgcatcc aggccctgtc gccacagcgg
     5221 ggttactcca cgcagacatc ggctggctaa ccatcatcgg tattgcgatt tctattcccg
     5281 tagggattgt tggctacttt gcagcgaaaa taatcaataa gcgccaatat gcgatgtcag
     5341 tagaagtact ggaacagatg caactggctc cggccagtga ggaaggcgcg acaaaattaa
     5401 gcgataaaat aaatccaccg ggcgtcgcgc tggtcacctc gctaattgtt attcctatcg
     5461 cgattatcat gacgggtacg gtttccgcaa cactgatgcc gccttcgcat cccctgcttg
     5521 gtacgctaca gctgatcggc tcaccaatgg tagctctaat gattgcgctg gtgctggcat
     5581 tctggttatt ggctttacgt cgcggctgga gcttacaaca caccagcgac attatgggct
     5641 cagcccttcc cactgcggcg gtagtgattt tggttactgg tgctggaggg gtatttggca
     5701 aagtgctggt ggaatcgggc gtcggcaaag cccttgccaa tatgctacaa atgattgacc
     5761 tgcctctgtt accagccgca tttattattt cactggctct gcgtgcatcg caggggtcag
     5821 caaccgtagc aatcctgaca accggcgggt tactctcaga agcggtgatg ggattgaatc
     5881 cgattcagtg cgtattggtg acgctggcag cctgctttgg tgggcttggc gcgtcacata
     5941 ttaatgactc agggttctgg attgtgacca aatatctggg gttgtcggta gcagacggtc
     6001 tgaaaacctg gacagtgtta acgaccattc tcggttttac cggattctta attacctggt
     6061 gcgtatgggc ggtaatttga ccttaataaa aaggtccgat gggcatcgga ccttttattg
     6121 tgcacagaaa aggccagcct cgcttgagac tggcctttct gacagatgct tacttactcg
     6181 cggaacagcg cttcgatatt cagcccctgc gtttgcagga tttcacgcaa acggcgcagg
     6241 ccttcaacct gaatctggcg aacacgttca cgggtgaggc caatttcacg acctacatct
     6301 tccagtgttg ccgcttcgta ccccagcaaa ccgaatcgac gtgccagcac ttcacgctgt
     6361 ttggcgttca gctcgaacag ccatttgacg atgctctgct tcatatcgtc atcttgcgtg
     6421 gtatcttccg gaccgttctc tttttcatcg gccaggatgt ccagcaacgc tttttcggaa
     6481 tcaccaccca gcggggtgtc taccgaggta atgcgctcgt taagacgaag catacggctg
     6541 acgtcatcaa ctggcttatc cagttgctct gcgatctctt ccgcacttgg ttcatggtcc
     6601 agcttatggg acaactcacg tgcggttcgc aggtaaacgt tcagctcctt tacgatgtga
     6661 atcggcaaac gaatagtacg ggtttggttc ataatcgccc gttcaatcgt ctggcgaatc
     6721 caccaggttg cgtatgttga gaagcggaaa ccacgttccg ggtcaaactt ctctaccgcg
     6781 cggatcagcc ccaggttgcc ctcttcgata aggtccagca acgccagacc acgattgcca
     6841 taacggcggg caatttttac caccagacgc aagttactct cgatcatccg gcggcgagag
     6901 gcgacatctc cacgcagtgc gcgacgcgca aaataaactt cttcttcggc cgttaacagt
     6961 ggtgaataac caatctcacc aaggtaaagc tgagtcgcgt ccaacacacg ctgtgtggct
     7021 ccctgcgata acagttcctc ttcggccaaa tcgttatcac tgggttcctc ttctactaag
     7081 gccttttcgt caaaaacctc aactccgttc tcatcaaatt ccgcatcttc atttaaatca
     7141 tgaactttca gcgtattctg actcataagg tggctcctac ccgtgatccc ttgacggaac
     7201 attcaagcaa aagcctggtt ccgccgattt atcgctgcgg caaataacgc agcgggttta
     7261 cggatttccc cttgtaacga atttcaaaat gcaagcgtgt tgaactggtt ccggtgctac
     7321 ccatggttgc tattttttgc cccgccttca cttcttgttg ttcccggacc agcattgtgt
     7381 cgttatgggc gtaggcactc aggtaatcat cattatgttt gatgataatc agattaccgt
     7441 agccgcgcag cgcgttaccg gcataaacaa cgcggccatc tgcggtcgcg ataattgcct
     7501 gtcctttgct gcctgcgata tcaatcccct tgttgccccc ctcagaagcg ccaaaggttt
     7561 cgatcacttt gccctcagtc ggccagcgcc aggtggagat aggcgtactg gttgatgtac
     7621 tgctgacagt tggctcggtt gtgcttgctg ttggtaccgt tacaggcgct gtgaccgtgg
     7681 tcgcagctgg cttgttgttc ggcaacattt tgttagcact ctgttcaccc gaagattcag
     7741 aatacgtaat tgttggttgc gacgcaacag caacggtgga attttgtgca ggcttgatca
     7801 caactccttg ctctgctgcg tcggcctggg taatggcatt tccgccagtg attggcgtac
     7861 cggaagcatt acccacctgc aaggtctgac caacgttcag cgcgtatggt gcctgaatat
     7921 tgttgcgctg agcaaggtca cggaaatcgt tgccagtaat ccaggcgata tagaaaagtg
     7981 tgtcgccttt tttcacggta taggtactgc cgctataact gcctttcgga atgttcccat
     8041 actgacggtt atagacgatg cgtccgtttt ccatctgtac cggctgctga gctactggct
     8101 gcactggctg gatttgcggt tgctgggctg tagacgtcgt ccccattttc ggcggcggcg
     8161 taatcaacat accagaattg gtatttgcag gcgcattgcc attaacggag ctgaccggtg
     8221 ccggtggatt tgaagtgtca gaacagcctg ccagccatag cgaaaccagt gacaaagccg
     8281 caatgcggcg aacggtgaat tttgggcttc ccgcgctcat ttatccccca ggaaaaattg
     8341 gttaataacc agtgacataa ttaccgtgca aggcacccta ctgaacactg gaaaagatgt
     8401 tcacgatacg ctgacctgcg gcaaaataac caggaaaaat ccaggtattt cctcacgttt
     8461 taagccagct cccccttcac taaagggaca aagcgcacgg cctccacggt atcgataata
     8521 aattcgcctc cccgacgacg cacccgtttc aaatactggt gctcctcccc tacgggtaag
     8581 acgagaatcc cgccttcgtc cagctgcgtc attagcgcag ttggaatttc cggcggtgcc
     8641 gccgtaacaa tgatagcgtc aaacggcgcg cgtgcctgcc aaccttgcca tccatcgcca
     8701 tgacgggttg aaacattatg taaatcaaga tttttcaggc ggcgacgcgc ctgccactgc
     8761 aaacctttaa tccgttcgac cgagcaaaca tgctggacaa gatgcgccag gattgccgtt
     8821 tgatatcccg aaccggtgcc aatttccagc acccgcgact gcggcgtcag ctcgagtaat
     8881 tcggtcattc gcgctaccat atacggctgc gaaattgtct gcccctgacc tatcggcaag
     8941 gcgatattgt cccaggcttt ttgttcaaac gcttcatcaa cgaatttttc acgcggcacg
     9001 gcagcaagtg cattcagcac ctgctcatcc tgaatacctt gcgcacgtaa ttgatccaga
     9061 agtgcttgta cgcgtctgct taccattgcg tgccaactcc cacgctgttt aaccagtctg
     9121 aaaccacatc ttgcgcgcta tgcgcagtta aatccacatg cagcggcgtg atggagacat
     9181 agccctcatc taccgcagca aaatcggtcc ccggaccggc atcacattta ccgcccggcg
     9241 ggccaatcca gtacagcgta ttgccgcgcg gatcttgctg cgggatcacc tgatctgccg
     9301 gatgtcgtgt accgcagcgc gtcacgcgaa tacctttgat ttgatccaag ggtaaatccg
     9361 gaacgttaat attaagaata cgtccggtgc gcagcggctc tttacacagt gcgcgcaaaa
     9421 ttgaacaggt taccgccgcg gcagtgtcgt aatgtttatg cccgtcaagc gagacggcca
     9481 gcgccggaaa acctaaatga cggccttcca tcgcggcggc taccgtaccg gaataaataa
     9541 cgtcatcccc cagattcggc ccggcgttaa tgccggacac aacaatgtcc gggcgcggac
     9601 gcatcagagc attcacgcca agatagacgc aatcggtcgg ggttcccatt tgcacagcaa
     9661 tatcaccatt ttcaaaggta aacgtgcgca gggaggattc cagtgtcaga gaatttgaag
     9721 cgccgctgcg gttacgatcg ggggcgacca cctgaacgtc agcaaactca cgcaaggctt
     9781 tcgccagcgt ttgtataccg ggtgcatgta ccccgtcatc attactcagc aatatgcgca
     9841 taatcacctg ttgtgttgat aagttccctg acaacgctgg ttgcaaaact acccgccgga
     9901 agccagaaac ggatctctac ggtgacgtca tcccaccaat tccagcttaa ttgttgcgga
     9961 tacagcagca tcgctctgcg cgcggcttca actttttcgc gcaccagtaa agcttgtaat
    10021 tcagtttctg cggcgacagc tgcttgttcg aatgccagcg cttcacgctg agttccccat
    10081 tcgccactgc ccggcaatgc ggcggttatc atcagctctt tatcgttgac gcgatgctgt
    10141 aattccgcca gttcttcggt ggttgctaca aaccagctac cacgtccggc taattgtagc
    10201 gcatcgccgt caacaacttg attaacgtct gcttttttga ggcgctcagc aacaatctga
    10261 ttaaacaacg cactgcgggc tgccgacaac caaaaactcc gtttattgcg atcgcgcacc
    10321 ggagtattgg tttgcgccca gcgcagcgcg ccctgcaagt tgctaccgcc aatcccaaaa
    10381 cgttgggcac cgaagtagtt cggtacacct tttacgcaaa tatcgatcag acgttgttca
    10441 acgtcatcgc gattgctcac ttcgcgcaga accagggtaa aggcgttacc tttcagcgcg
    10501 cctaaacgca gcttgcgctt gtgccgcgca tactccagca cctggcagcc ttccagttga
    10561 aaggcgctca gatcgggcat ttccttgcct ggcacgcgag cgcataacca ctgttccgta
    10621 acagcatgtt tgtctttttg cccagcgaag ctgacttcat gggcatgaat tttcaggaat
    10681 ttcgccagtg catccgccac aaaacgggta ttgcagccgt ttttgaggat tctaaccaga
    10741 atatgctcac cttcaccatc aggctcaaag cccaaatctt ccaccaccac aaagtcttcc
    10801 ggattggctt tcagcagccc ggtgccttgc ggtttaccgt ggaggtaagt gagattatca
    10861 aactcaatca ttttgttgcc ttaatgagta gcgccaccgc ttcacaggca atcccttccc
    10921 cacgtccggt aaatccaagt ttttccgtag tagtggcttt cacgttaaca tcatccatat
    10981 ggcagccgag atcttcggca ataaacacgc gcatttgtgg aatgtgcggc aacatcttcg
    11041 gtgcctgagc gatgatagtg acatcgacgt tgcccagggt ataacccttc gcctgaatac
    11101 gacgccaggc ttcgcgtagc agctcgcggc tgtcggcacc tttaaatgcc ggatcggtat
    11161 ccgggaacag cttgccgata tcccccagcg ccgccgcgcc aagcaatgca tcggtcaacg
    11221 catggagcgc cacgtcgcca tcagaatgcg ccagcaatcc tttttcgtaa ggaatgcgta
    11281 cgccaccaat gataattggg ccttcaccgc caaaggcatg tacgtcaaaa ccgtgtccaa
    11341 ttcgcattat gtattctcct gatggatggt tcgggtgagg taaaactcgg ccagtgccaa
    11401 atcttccggg cgcgtgactt taatgttatc cgcacggcct tcgaccaact gaggatggaa
    11461 tccgcaatat tccagcgccg aggcttcgtc ggtaatagtc gcgccttcat ttagagcgcg
    11521 cgtcagacag tcatgtaaca gctcacgagg gaaaaattgc ggcgtcagcg cgtgccataa
    11581 gccgttgcga tcaacggtat gagcaatggc atttttgccc ggttcggcac gtttcatcgt
    11641 atcgcgcact ggtgcggcta ggatccctcc cgtgcggctg gtttcgctca acgccaacaa
    11701 tcgcgcgagg tcatcctgat gcagacaagg acgagcggcg tcatgcacca atacccactg
    11761 cgcgtcgcca gcggctttca aacctgccag cacggaatcg gcacgctcat caccgccatc
    11821 tacaacggtg atttgcggat gattcgccag aggaagttgt gcaaaacggc tatcgccagg
    11881 acttatggca atgacgacac gtttcacccg gggatgcgcc agcagcgcat gcaccgagtg
    11941 ttcaagaatg gtttgattac cgattgagag atattgctta ggacattccg tttgcattcg
    12001 acggccaaat ccggccgccg gaaccacggc gcaaacatcc aaatgagtgg ttgccatgtt
    12061 aattcccggg ctgatttatc gattgttttg ccccgcagac tgtgcgcgct tcgacgcgtc
    12121 aggcaccaga cgataaaaag tttcgcccgg cttggtcatg ctgagttcat tacgcgcacg
    12181 ctcttcgagc gcctcctggc cgccattgag atcgtcaatt tcggcaaaaa gttgatcgtt
    12241 tcgcgcttta agtttcgcgt ttgtagcttg ctgtgccgcc acatcatcat tgacgcgggt
    12301 atagtcatgt ataccgttct taccgaacca cagcgaatac tgtagccaga ccagaatagc
    12361 cagcaacagc agcgttagtt tacccatcct gccccctgaa aaacggcatc atcatcccat
    12421 gcatccgaag acgactctac atcctctgtt ggggataccg cgacaacgcg ggcaaatgta
    12481 ccacatttgt ccattgttac gtatacccag ggcgtgcaga acataatctc attattagtt
    12541 acggtttgaa ttatgaacag aggagacaag aaagtacaaa ttagcccagt agccacataa
    12601 acagtgcgcc aaacataatg cctactgtca ccagggtgaa aacaatactg tagcgtagct
    12661 ttccgtccat caatgaatgc agcgcaatcc ccaccactac cgcgacaggc atcagtgcca
    12721 gaaagaaagg ccaggtgtag ataaagaaga acagcgtgtt agagccataa atcaacatcg
    12781 gcatcgccag cgcaaataac caggagataa aaccgaccac ggcaccaggc agtgaccatg
    12841 tggtttcttc atcctcagta aggctgtcgt tatttgttag tgtaatgtta tggctattac
    12901 gcatatttga tcctgttact ttgacgaacc gggcatggaa acccggtggt gtctcaggat
    12961 ctgataatat cgttctgtct caacagatct aataattgct gtaccaaatt tgttactaat
    13021 tgttcaccat tgagatgaat ttctgccgat tcaggcgctt cgtaaacgga atctattccc
    13081 gtaaagttgc gcagttcacc ggcacgcgct ttcttatata agcctttggg atcgcgggct
    13141 tcgcaaatcg ccagcggcgt atcgacaaac acttcgataa agcgcccttc tcctacgcgt
    13201 tcgcgaacca tctggcgttc ggcgcggtgt ggcgagataa atgcggtcag caccaccagt
    13261 ccggcttcaa ccatcaaatt cgccacttca ccgacgcgac ggatattctc tttacgatcg
    13321 gcatcgctaa aaccgagatc gctgcataat ccgtggcgaa cattgtcgcc atccagcaga
    13381 tacgtactga cgccgagttt atgtaacgcc tcctccagcg ccccggcgac cgttgattta
    13441 ccggacccag agaggccggt aaaccacagc actacaccac gatgacagtg gtgtagctcg
    13501 cgttgttgca cagtgaccgg atggctatgc cagacgacgt tttcgtcatg cagcgccatt
    13561 atttatcccc cagcaaatcg cgcgcgcccc agtgcggaaa gtggcgacga accagggcat
    13621 tcaattccag ttcgaatgca ctgaattcag atgacgcaac ggcggcctcg tttttcggct
    13681 catgcaccat accggcacca acagtcacgt tgctcaggcg atcgataaaa atcagcccac
    13741 ccgtcaccgg attttgttga taacgatcta acaccagcgg ctcgtcaaaa gtgagatcca
    13801 cgaggccgat cccattcagt ggcaggtttt caacttcacg ctgggtaagg ttattaatat
    13861 caacctgata gcgaatgcca tcaacacgcg cgcgcgtctt cttaccggca attttgatgt
    13921 cgtaactctg gcccggggaa agcggctgtt ccgccatcca taccacatcc accgacgcgc
    13981 tctgcaccgc cggtaacgct tcgtctgccg ccagcagcag atcgccacgg ctgatgtcga
    14041 tctcatccgt cagcaccagg gtgatcgctt ctccggcaaa ggcttcttcg cgatcaccat
    14101 caaaagtcac gatccgcgcg acgtttgatt ccacaccaga gggcagcact ttgacacgtt
    14161 gcccgacttc cacgcgaccg gatgccagcg ttccggcgta gccacgaaaa tcgagattcg
    14221 ggcgattaac gtactgcacc gggaagcgca ttggctgggc atccaccact cgctggatct
    14281 ccacggtttc cagcacttcg agcagtgtcg gaccgctgta ccacgacata ctttcacttt
    14341 gcgatgccac gttgtcgcct tccagtgcag agagcggcac aaagcggata tccagattac
    14401 ccggcagctg cccggcaaag gtcaaataat cttcacgaat acgggtgaac gtctcttcac
    14461 tgtaatccac cagatccatt ttgttgatcg ccacgaccag atgtttgatc cccaacagtg
    14521 tggagataaa actgtgacga cgggtttgat cgagcacgcc tttacgggca tcgatcagta
    14581 agatcgccag ttcacatgtc gatgcgccag tcgccatatt gcgagtgtac tgctcgtgcc
    14641 ctggggtgtc ggcgataata aatttacgct tctcggtaga gaaataacgg taagccacgt
    14701 caatggtgat gccctgttcg cgctcagctt gcaggccgtc caccagcagt gccagatcca
    14761 gcttttcgcc ctgggtgccg tgacgcttac tgtcgttatg cagcgatgag agctgatctt
    14821 cgtagatttg gcgggtatcg tgcagcaggc gaccaatcag ggtacttttg ccgtcatcga
    14881 cgctaccaca ggtcagaaaa cgcagcaggc ttttatgttg ttgcgcaatc atccaggctt
    14941 cgacgccgcc ttcattggcg atttgttgtg caagtgcggt gttcatctta aaaatacccc
    15001 tgacgttttt tcagctccat agaccccgcc tggtcgcggt caatcacgcg gtcctgacgt
    15061 tcactggtgg tagaaaccag catctcttcg atgatctccg gcagtgtttg tgaatttgac
    15121 tccaccgcac cggtcagcgg ccagcagccc agcgtacgga aacgcaccat ccgtttttta
    15181 atcacttcgc ccggttgcag gtcgatacgg ttgtcatcaa tcatcatcaa cataccgtcg
    15241 cgttccagaa ccggacgttc cgcagcgaga tacagtggca caatgtcgat attttccagc
    15301 cagatgtatt gccagatatc ctgctcggtc cagttagaga gcgggaagac gcggatgctt
    15361 tcacctttgt taatttgccc gttgtagttg tgccacagct ccgggcgctg atttttcgga
    15421 tcccagcgat ggaagcggtc acggaaagag tagattcgct ctttagcgcg ggatttctct
    15481 tcatcacggc gcgcaccacc gaaggcggca tcaaaaccgt atttgttcag cgcctgcttc
    15541 aggccttcag ttttcataat atcggtatgt ttcgcgctgc cgtgtacgaa tggattaatc
    15601 cccatcgcca cgccttccgg gtttttatgc accagcagct cgcagccgta ggctttagca
    15661 gtacgatcgc ggaactcata catctcgcgg aatttccagc cggtatcgac atgcagcaac
    15721 gggaaaggca gcgtacctgg ataaaacgcc ttgcgcgcca gatgcagcat gacgctggaa
    15781 tctttaccga tagagtagag catcaccgga tttgagaatt ctgccgccac ctcgcgaata
    15841 atgtggatgc tttccgcctc cagttgccgc aggtgagtaa gtcgtttttg agccataacc
    15901 gttcctttgc aataccgcta ttttcttgcc atcagatgtt tcgactatag ggagcgtaag
    15961 agaacgaatg aaattaccaa ttagaatgag tagttcctta acggaataac gatttggcaa
    16021 agctaatatc aaaaagtgct taaggcaccg gatttcgggc gtttaggaag atttgaaatt
    16081 gttttagcgc agcggcagtt tcatactatg gcggtaaaaa aatttgcatg gtatttaagg
    16141 actcactatg ttttccgcat tgcgccaccg taccgctgcc ctggcgctcg gcgtatgctt
    16201 tattctcccc gtacacgcct cgtcacctaa acctggcgat tttgctaata ctcaggcacg
    16261 acatattgct actttctttc cgggacgcat gaccggaact cctgcagaaa tgttatctgc
    16321 cgattatatt cgccaacagt ttcagcaaat gggttatcgc agtgatattc ggacatttaa
    16381 tagtcggtat atttataccg cccgcgataa tcgtaagagc tggcataacg tgacgggaag
    16441 tacggtgatt gccgctcatg aaggcaaagc gccgcagcag atcatcatta tggcgcatct
    16501 ggatacttac gccccgctga gcgatgctga cgccgatgcc aatctcggcg ggctgacgtt
    16561 acaaggaatg gatgataacg ccgcaggttt aggtgtcatg ctggaattgg cagaacgcct
    16621 gaaaaatacg cctaccgagt atggtattcg atttgtggcg accagcggcg aagaggaagg
    16681 gaaattaggc gctgagaatt tactcaagcg gatgagtgac accgaaaaga aaaatacgct
    16741 gctggtgatt aatctcgata acttaattgt tggcgataaa ttgtatttca acagcggtgt
    16801 aaaaacccct gaagcagtaa ggaaattaac gcgcgacagg gcgctggcaa ttgcgcgcag
    16861 tcacggaata gccgcaacga ccaatccggg gttgaataaa aattatccga aaggcactgg
    16921 gtgttgtaat gacgcagaaa tattcgacaa agcgggcatt gctgtacttt cggtggaagc
    16981 gactaactgg aatcttggga ataaggatgg ttatcagcaa cgcgcaaaaa cagccgcatt
    17041 ccctgcggga aatagctggc atgacgtaag actggataat caacagcata ttgataaggc
    17101 acttcctgga agaatagaac gtcgctgccg tgacgttatg cggataatgc taccgttggt
    17161 gaaggagctg gcgaaggcgt cttgatgggt ttgaaaatgg gagctgggag ttctaccgca
    17221 ggggcgggga attctaagtg atatccatta tcgcatccag tgcgcccggt ttatccccgc
    17281 tggcgcgggg aacacactaa gcatacataa ctgtttttaa acaaatttat tccgcatcaa
    17341 caatctacca actaaattaa aacatttcct tatttttaaa gaacggataa cttattgatt
    17401 atcaacagga agaaaagaaa ccaaacgtaa cccatccaaa tccaccggaa tacgtctgtt
    17461 ttctccccag gtctgaaatt caaaacccga ctcggtattg gtcgcccagg ccatcaccac
    17521 atttccgcaa ccagccagtt gggtaatttg ctgccagatc atctcccgaa tacgttttga
    17581 tgtatcacca acatacacac cggcacgcac ttccagtagc cagattgcga gccgtccacg
    17641 taagcgcggc gggacatttt ctgtaacaac cacgaccatg ctcatcagcc gcgtcctcga
    17701 tgaccgctat cgcccaacgt ttcaggttcg gggatggctg gcggtaacat atccggcgca
    17761 ggttgtggcg gttcaatttc acctgcggca aggacttcct caattaacgg tattaatttg
    17821 cccgttaact tagtgctacg gaaaatatca cgacaggcta atctgacttc tttatcaggt
    17881 tctgcgggtt gcctcgccgc tatttcaaat gcctttggta caaccgaatc aaatttaatg
    17941 atatcggcta tgtcataaac aaatgaaagc ggtttgccac tatggataaa cccaatagcg
    18001 ggcgcatatc ccgcggctaa tactgccgct tcagatatac cgtacagaca tgatgtagca
    18061 gcactgatgc agcgattcac aacatcgcct tttcccagtc tttaggatcg tatttgcgac
    18121 cattccattt cacaccatat tgtttcgcca gtaatgcata cgtctggcga acgcgagatc
    18181 cctcaattcc acgtagctgc tccactgaac ggcgagctgg cggtggctca cgaaaacgta
    18241 attcatacat tttgcgcacc accttcagac gtagatcttc cgttaaagcc agctttgcct
    18301 ggtagagtaa cttatcagca cgcgccccac cgggttgtcc ggaagagtag acgcgaacac
    18361 ccgcttcacc gacccagacc agtagcgtcc ccaccgtggc ggccagatgc accgccgcgt
    18421 gggaaactct cgttcccggt tcgagcataa tgcaggcgac cgatcccacc ggaatgtgcg
    18481 tgcggatccc ggttttatcg atcagcacga aagcgccgtc cagtacgtcg atttgcccgt
    18541 actggaggaa gatcatagag gtgcgatctt ttaacgggat cgggctcagc ggtacaaacg
    18601 tcacgcctct gctccgggtt tgatcagcat cagaccacag ccgaacgcgc ggcttttgcc
    18661 atacccctga ctgagacgtt gcagaaataa cccgggatcg gtgaccgtaa gcatccccgt
    18721 ataatccacg ctactgaact ggatcagttg ccgggagttt tcccgccgca gttgctgttg
    18781 tcggtaggca tcaaccgagg tatccagcag tgtaaaacca cttctctccc cctgggctgc
    18841 cagccagtcc agcgccgcct gttgttgatg caaccagaca tcacttcctt ccgcctgccc
    18901 cctcacctgc cgtttcgcct ccatcagcag atcgtggcgc ttgcccgctt tacagattgt
    18961 tggattcgcc cgcaggttga aacaaagttg ttgtccggta cacagctcgg gcgcaaatga
    19021 ccggcattct atggtgaacg tatcactttc cgccgggcgt tcctgcgaca gtacaaaaaa
    19081 gcgaaacgcg ccctggagtt cttcccgacg ataaagaaat tgcctttctt tgccgctagg
    19141 gaagagatcc cacagccact gatgcatcac atattcaccg cgatccacca gatgcagcaa
    19201 ctgcgcaggc gaaagctggc cggtatgtaa ggttattctt gagaggtaca tggttcctcc
    19261 ttgctgagcc acggcccctg attgacggtg cgttccccaa acagccactg ctgacgattt
    19321 aaaggaacat cccggcggcg taatattttg ctcgcgacca ggccgtcgtg tttcccttcc
    19381 caccagcatt catcctgaag tttcgggagt gaaactttca gtttatggaa atgatcctga
    19441 tactgttggt atgcattaca taaggcatca cacgcgttgc cttcgagcag taacggcgca
    19501 agaggtaatg ccagcggatg actttttcgc cccagataaa gcggaaaaac tggatggcgt
    19561 aaaccgtcct gcaactgttc gaggctgtaa ggcgcatcgg ctgttgttgc caccgccacc
    19621 atccaccagg catcggtgta gtagtcgcgc cgggagataa tcgcgctcaa aagctcaggg
    19681 tcgctcaact cttcgcgacg gctgaaataa cgtgctttac gcacctcttt tggcatctgg
    19741 accgtgtgat aatcccgtgc ccagcgcggg ttacggctgg cgcaaaccac cagtgaatag
    19801 tggcgattaa acgcgtttag gcgttcggta tcatcacgcc ggatccctac cccggcagcc
    19861 agcagcccca gcaatgctga gcgcgaagg
//
LOCUS       DADMHC010000061        19883 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.061, whole genome shotgun sequence.
ACCESSION   DADMHC010000061 DADMHC010000000
VERSION     DADMHC010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19883
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.061"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(34..381)
                     /locus_tag="JNZ57_001834"
     CDS             complement(34..381)
                     /locus_tag="JNZ57_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH nuclease family protein"
                     /protein_id="HAY8828072.1"
                     /translation="MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTV
                     HHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYN
                     PFADLKAMMNKTK"
     gene            complement(510..1481)
                     /gene="secF"
                     /locus_tag="JNZ57_001835"
     CDS             complement(510..1481)
                     /gene="secF"
                     /locus_tag="JNZ57_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HAY8828073.1"
                     /translation="MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVR
                     GFNWGLDFTGGTVIEITLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAE
                     GETGGQVLGSQVLKVINESTNQNAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVY
                     VGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVS
                     DRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLT
                     MLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSILP"
     gene            complement(1492..3339)
                     /gene="secD"
                     /locus_tag="JNZ57_001836"
     CDS             complement(1492..3339)
                     /gene="secD"
                     /locus_tag="JNZ57_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HAY8828074.1"
                     /translation="MLNRYPLWKYVMLIVVIVIGLLYALPNLFGEDPAVQITGARGVA
                     ASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDSTDTQLRAREALMGVMGDKYVVA
                     LNLAPATPRWLAAIHAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLRE
                     KGIPYTTVRKENNYGLSITFRDAKARDEAIAYLSKRHPDLVISSQGSNQLRAVMSDAR
                     LSEAREYAVQQNINILRNRVNQLGVAEPVVQRQGADRIVVELPGIQDTARAKEILGAT
                     ATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTSSQD
                     EYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEV
                     INIANIQSRLGNSFRITGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNI
                     EQGLEACLAGLLVSILFMIIFYKKFGLIATSALIANLILIVGIMSLLPGATLSMPGIA
                     GIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANITTLIKVII
                     LYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVKKLSI"
     gene            complement(3367..3699)
                     /gene="yajC"
                     /locus_tag="JNZ57_001837"
     CDS             complement(3367..3699)
                     /gene="yajC"
                     /locus_tag="JNZ57_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000007628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HAY8828075.1"
                     /translation="MSFFISDAVAATGAPVQGSPMSLILMLVVFGLIFYFMILRPQQK
                     RTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVL
                     PKGTMKAL"
     gene            complement(3722..4849)
                     /gene="tgt"
                     /locus_tag="JNZ57_001838"
     CDS             complement(3722..4849)
                     /gene="tgt"
                     /locus_tag="JNZ57_001838"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HAY8828076.1"
                     /translation="MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPE
                     EVEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIR
                     KITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSME
                     MSLRWAKRSRERFDSLGNKNALFGIIQGSVYEDLRDISVKGLVDIGFDGYAVGGLAVG
                     EPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGH
                     LFVTDGVVKIRNAKYKSDTGPLDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHN
                     LRYYQRLMAGLRKAIEEGKLESFVTDFYQRQGREVPPLNVD"
     gene            complement(4905..5975)
                     /gene="queA"
                     /locus_tag="JNZ57_001839"
     CDS             complement(4905..5975)
                     /gene="queA"
                     /locus_tag="JNZ57_001839"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HAY8828077.1"
                     /translation="MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFT
                     DLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPK
                     PGAELLLGDDESINATMTARHGALFEVEFNDDRSVLDILNSIGHMPLPPYIDRPDEDA
                     DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVD
                     TIEDHIMHSEYAEVPQDMVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPF
                     FDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRF
                     FSYGDAMFITYNPQAINERVGE"
     gene            6068..6649
                     /gene="acpH"
                     /locus_tag="JNZ57_001840"
     CDS             6068..6649
                     /gene="acpH"
                     /locus_tag="JNZ57_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP phosphodiesterase"
                     /protein_id="HAY8828078.1"
                     /translation="MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHM
                     HRRIDVLTDNLPEVREAREWFRRETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFI
                     CYARKQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALR
                     DSWYDLNAHYTALETRFWQFYPRMMAQASHKAL"
     gene            complement(6654..8376)
                     /gene="malZ"
                     /locus_tag="JNZ57_001841"
                     /pseudo
     CDS             complement(6654..8376)
                     /gene="malZ"
                     /locus_tag="JNZ57_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706291.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin glucosidase"
     gene            complement(8532..9905)
                     /gene="proY"
                     /locus_tag="JNZ57_001842"
     CDS             complement(8532..9905)
                     /gene="proY"
                     /locus_tag="JNZ57_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline-specific permease ProY"
                     /protein_id="HAY8828079.1"
                     /translation="MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSV
                     LLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIV
                     AIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI
                     IIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEII
                     GITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQH
                     MGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVT
                     VLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVK
                     ALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHD
                     RQLAENQ"
     gene            complement(9981..11300)
                     /gene="brnQ"
                     /locus_tag="JNZ57_001843"
     CDS             complement(9981..11300)
                     /gene="brnQ"
                     /locus_tag="JNZ57_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transporter carrier
                     protein BrnQ"
                     /protein_id="HAY8828080.1"
                     /translation="MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTA
                     AFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRT
                     ATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALV
                     ILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGV
                     TEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFG
                     GGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLS
                     QLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAF
                     SDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH"
     gene            complement(11707..13002)
                     /gene="phoR"
                     /locus_tag="JNZ57_001844"
     CDS             complement(11707..13002)
                     /gene="phoR"
                     /locus_tag="JNZ57_001844"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon sensor histidine kinase PhoR"
                     /protein_id="HAY8828081.1"
                     /translation="MLEWLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLI
                     WHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRS
                     GAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRD
                     FSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTP
                     LTVLQGYLEMMDEQPLEGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTQLLNE
                     KVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTP
                     EGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLA
                     IVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD"
     gene            complement(13060..13749)
                     /gene="phoB"
                     /locus_tag="JNZ57_001845"
     CDS             complement(13060..13749)
                     /gene="phoB"
                     /locus_tag="JNZ57_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000113934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate response regulator transcription
                     factor PhoB"
                     /protein_id="HAY8828082.1"
                     /translation="MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNE
                     PWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDY
                     ITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMVGEEPLEMGPTEF
                     KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTV
                     RGTGYRFSTRF"
     gene            13939..15141
                     /gene="sbcD"
                     /locus_tag="JNZ57_001846"
     CDS             13939..15141
                     /gene="sbcD"
                     /locus_tag="JNZ57_001846"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease subunit SbcD"
                     /protein_id="HAY8828083.1"
                     /translation="MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAII
                     VAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNT
                     TVVASAGHAPQILPRRDGTPGAVLCSIPFLRPRDIISSQAGLNGIEKQQHLLAAITDY
                     YQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYI
                     ALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVT
                     QPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVE
                     VLLVRRSHEQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLH
                     TLAGEHEA"
     gene            15138..18281
                     /gene="sbcC"
                     /locus_tag="JNZ57_001847"
     CDS             15138..18281
                     /gene="sbcC"
                     /locus_tag="JNZ57_001847"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308474.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease subunit SbcC"
                     /protein_id="HAY8828084.1"
                     /translation="MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKT
                     TLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR
                     NQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAA
                     FLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQV
                     QSLTASLQVLTDEEKQLLTAQQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKA
                     QPQLAALSLAQPARNLRPHWERIAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHA
                     AKQSAELQQQQQSLNTWLQEHDRFRQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHA
                     EQKLNALAAITLTLTADEVATALAQHAEQRPLRQRLVALHGQIVPQQKRLAQLMVTIQ
                     NGSLEQTQRNVALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPL
                     CGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGAALRGQLDALTKQLQRDENE
                     AQSLRQDEQALTQQWQAVTASLNITLQPQDDIQPWLDAQDEHERQLRLLSQRHELQGQ
                     IAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQEDEEESWLATRQQEAQSWQQRQN
                     ELTALQNRIQQLTPILETLPQSDDLPHSEETVALDNWRQVHEQCLALHSQQQTLQQQD
                     VLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRSQAQT
                     LVTQTAETLAQHQQHRPDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDA
                     DNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQL
                     TRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSH
                     KTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK
                     KINGLGYSKLESTFAVK"
     gene            18407..19591
                     /gene="araJ"
                     /locus_tag="JNZ57_001848"
     CDS             18407..19591
                     /gene="araJ"
                     /locus_tag="JNZ57_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414930.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter AraJ"
                     /protein_id="HAY8828085.1"
                     /translation="MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMI
                     SYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSG
                     FPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTF
                     LLIAVFNIAVMASVYFWVPDIRDEAKGKLREQFHFLRSPAPWLIFAATMFGNAGVFAW
                     FSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIV
                     LALLMLFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFN
                     LGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADTPVLAKP
                     LG"
     gene            complement(19734..>19883)
                     /locus_tag="JNZ57_001849"
     CDS             complement(19734..>19883)
                     /locus_tag="JNZ57_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308471.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HAY8828086.1"
                     /translation="MSNVDRLYQTVPQLIKQFVFGGECETPVRKAKHGDSSGVRGAAW
                     LWPQE"
BASE COUNT         4991 a         5422 c         5004 g         4466 t
ORIGIN      
        1 aagcgtagcg catcaggcaa ttttacgttt taatcacttc gtcttgttca tcatcgcttt
       61 caggtcagcg aatgggttgt acttcgcttc accgacatct ttctgcgcat cttcccctgc
      121 gataacggtc gtaccatact gatccgcttc ggtatatttc gaatgctcat gatcgtggca
      181 atagagacaa agcaattccc agttactgcc atcttccggg ttattggtat ggtcgtgatc
      241 aatgtggtga acggtaagtt cacgcaggtt ggaataaaca aactcgcggg aacagcgacc
      301 gcagacccac ggatatattt ttaatgcttt ttcgcgatag ccgctttcta accgcgcata
      361 gttttttggg atgatagcca tgaagagtta cctggatgaa atgtagggtt acgcgcagtt
      421 tcccaagatg cggggatttt cgcaatctcc atacatcaaa aaaaatcccg atcttctgac
      481 cgggattttc aacatcaacg ggaacttgat tacggcagaa ttgacggctg atccgcccct
      541 tctttttcca ctttctgctg caacatgtgt tcgcgcttca tacccagttt cagagccaac
      601 gcagatgcca catagatgga agatgcagta ccgatggaaa caccgataag catggtcagc
      661 gagaagcctt ccagtaccgg accaccgaag aggtacagca tcaggataac catcaaggta
      721 gtaccggatg tgatcaaggt acggtgcagc gtctgggtca aggacacgtt aaagatttcg
      781 taaggcgtac cgcgacggat cttgcggaag ttttcacgaa tacggtccga taccacgata
      841 ctgtcgttaa gcgagtaacc gataaccgac atcaacgatg ccacaatggt caggtcaatc
      901 tcgatatgga ataacgacaa aatacccagc gtaatgataa cgtcgtgcgc cagcgcaata
      961 acaacccctg ccgccagtcg ccactcaaag cgaaaaccta cgtacacaag gatagacagc
     1021 agcgccgcca tcaacgccat cgcaccggtt tgcgcaaggt ctgcccccac gctcggaccg
     1081 acgaactcaa tacgcttcac tgctgcattc tgattggtgg attcgttaat caccttcaga
     1141 acctggctgc ccagcacctg accgccggtt tcgccttcag caggcggcat acggaccatg
     1201 atgtcgtggc tgctaccaaa gttttgcagc attggctctt caaaaccggc tttttgcaat
     1261 gcatcacgca ttacgtcaat ttcagccggt ttttcgagcg taatttcgat aaccgtacca
     1321 ccggtgaaat ccagccccca gttaaagccg cgcacgccca taataacgat agcggcgatt
     1381 aacagcagac cagagatgcc gaaagcccag tagtcccagc gcataaagtc atagacttta
     1441 cggccgtggt ttagttgttc aacagtatat tcctgtgcca catcgcactc ctcagattga
     1501 cagcttcttg acgcgcttgc cgccatatag caggtttacg atggcacgcg taccgacaat
     1561 cgcggtaaac atcgacgtcg ccacaccgat accggtagta atcgcgaacc ctttaattgc
     1621 cccggtaccc actgcgtaca ggatgatgac tttaatcagc gtggtgatgt tcgcatcgaa
     1681 gatagaactg aatgcgccac gataaccttc atcaattgcc tgttgaacag tacgtccgtt
     1741 gctcaactct tctttaatac gttcgttgat cagtacgttc gcatcgaccg ccaccgcaag
     1801 ggttaagacg atacccgcga tacctggcat actcagcgtt gcgcctggca acagcgacat
     1861 aatgccgacg attaagatca agttggcaat cagagcactg gtcgcaatca gaccaaactt
     1921 cttatagaag atgatcatga acagaataga aaccagcaga ccggcaaggc aagcctccag
     1981 cccctgttca atgttctgca tacccagggt tgggccaatg gtacgttctt caacaatctg
     2041 aatcggcgcg atcaacgcac cggcacgcag cagcagtgac agctgacggg cttcgttcgg
     2101 gttgttgatg ccggtgatac ggaagctgtt acccagacga gactggatgt tggcgatgtt
     2161 aatcacctct tcctgtttca ccagaaccgc acgaccattt gcatctttct taccgctgtc
     2221 tttgtactcc acaaacaggg ttgccatcgg tttgccgatg ttgtccttag tgaagttaga
     2281 catgatgtta ccaccagcgc tatcgagcga gatgttaacc tgcggttggt tgtattcgtc
     2341 ctggctggaa gtggagtcgg tgatatggtc accggtcaga attacgcgtt tgtacagcac
     2401 aactggctga ccttcgcggg tctgtttcac ttcagagtcg cccggtacgc gaccggatgc
     2461 cgcagcggcc tggtcaacgt tggtgtttac cagacggaat tccagcgttg ccgtcgcacc
     2521 cagaatctct ttcgcacgcg cagtgtcctg aatacctggc agttcaacaa cgatacggtc
     2581 agcaccctga cgctgaacca ccggctccgc tacgccaagt tggtttacac ggttacgcag
     2641 gatattgatg ttctgctgca ccgcatattc acgcgcttca ctcagacgag catcgctcat
     2701 taccgcacgc agctggttgc tgccctggct actaatcacc aagtccggat ggcgcttgct
     2761 cagatacgca atggcttcat cacgagcttt agcatcgcgg aaagtaatgc tcaggccgta
     2821 gttgttttct ttacgaacgg tggtatacgg gatgcccttt tcacgcagat cgctgcgcag
     2881 gctatcgata ttttgttcct ggagtttgcc aagcgcggtg tccatatcca cttccatcag
     2941 gaagtgaacg ccgccacgca ggtcaaggcc gagcttcatc ggctcagcgt gaatagctgc
     3001 cagccagcgc ggcgttgccg gggcaaggtt aagcgccacg acgtatttgt cacccataac
     3061 gcccattaat gcttcacgag cgcgcagctg ggtgtcagtg gagtcgaagc gcgcaagaat
     3121 agcgccctct tccagtgcca cagacttagc agttattttt tcttcttgta acgttttctg
     3181 gacctggatc agcgtttgct cactggcggc gactccgcgc gcaccagtga tctgaacagc
     3241 cggatcctca ccaaacaggt tgggaagcgc atacagcaga ccgatgacaa tcaccacgat
     3301 cagcatgacg tacttccaca aaggataacg gtttaacacg gcaattccct tagggaaaaa
     3361 ttttaattac agcgccttca tggtgccttt cggcaggacg gcagctacga agtcacgttt
     3421 aataactact tcagtggtgt cattcagcgc gatagcaatg tagccgtttt ccgctacttt
     3481 ggttacgcga ccaaccaggc caccgttcgt cagaacttca tcacctttgg caatggagtc
     3541 catcagcttt ttgtgttctt tggtgcgctt ctgctgtgga cgcaggatca tgaaatagaa
     3601 aatcagaccg aataccacca gcatcaaaat caaagacatc gggctacctt gcaccggtgc
     3661 acccgttgcc gctaccgcat cagaaataaa aaagctcatt aaatttccct cattattaat
     3721 attaatcaac gttcaaaggt ggtacttctc gcccctgacg ctggtaaaaa tcagttacga
     3781 agctctctaa tttaccctct tcaatagcct tgcgtaaacc cgccatcaaa cgctggtagt
     3841 aacgaaggtt atgaatggtg ttgagtcgcg cgcctaatat ttcgttgcaa cggtcaagat
     3901 gatgcaagta agcgcgtgaa taattgcgac aggtgtagca atcacactca ggatcgagtg
     3961 ggccagtatc gctcttatac ttcgcattgc ggattttcac cacgccatcg gtcacgaaca
     4021 aatgaccatt tcgggcgttg cgggttggca ttacgcagtc aaacatatcg ataccacgac
     4081 gtacgccttc aaccaggtct tctggtttac caacgcccat caggtaacgc ggtttgtctg
     4141 ccggaatttg cgggcataca tgctccagaa tgcggtgcat atctgctttc ggctcaccca
     4201 cagccagacc gccgacagcg tagccatcaa aaccgatatc taccagacct ttaacagaaa
     4261 tatcacgtaa atcttcgtaa acgctgccct gaatgatacc aaacagcgca tttttgtttc
     4321 cgagactgtc aaaacgctca cggctacgct tcgcccaacg cagagacatc tccatggagc
     4381 gttttgcgta atcccagtca gcaggatacg gcgtacactc atcaaagatc atgacgatat
     4441 ccgaaccaag atcgtactga atctccattg atttttcagg atcgaggaaa atcggatcgc
     4501 cgttgatcgg gttacggaag tgcacgccct gttcggtgat tttacgaata tcgccaaggc
     4561 tgaagacctg gaagccgccg gagtcggtga ggatcggccc cttccactgc ataaaatcgt
     4621 gcagatcgcc gtgcagtttc atgatttcct ggcccgggcg cagccacagg tggaaggtgt
     4681 tgccgaggat aatttgcgcg ccagtggctt caacttcttc cggcgtcatc ccttttacgg
     4741 tgccgtaggt gccaacaggc ataaaacaag gcgtttccac tacgccacga tcaaagacca
     4801 ggcggccacg gcgtgcgcga ccgtcggtgg tgtccagttc aaatttcatt ttttctccac
     4861 tacgtcagaa aaacagtcca acgttttaaa ccagcgccgc ggaattactc cccgacgcgc
     4921 tcattaattg cctgcggatt gtacgtaata aacatcgcat caccgtaact aaaaaagcga
     4981 tatttctctt ctaccgctgc tttataggcg ttcatggtgt gttgataacc ggcaaaggcc
     5041 gaaaccagca taatcagcgt cgactctggc aagtggaagt tcgtcaccag cgcatcgacc
     5101 actttgtact ggaagcccgg atagataaag atttgggtat cgtcgaagaa cggttcaatg
     5161 agatcgtttt tcgctgcctg agccgcgctt tccagcgaac gtactgaagt ggtgccaacc
     5221 gcaatcaccc ggttaccgcg cgctttcgcc gccagtaccg cgtctaccat atcctgcggt
     5281 acttcagcgt attccgagtg catgatgtga tcttcaatgg tgtcgacgcg caccggctgg
     5341 aaggtgcccg caccaacgtg caacgtcaca aacgccatct ccacgccttt ggcgcgcaat
     5401 ttttccagca aaggctcgtc aaaatgcaga ccagcggtcg gggctgcaac cgcgcccggt
     5461 ttttcgctat aaacggtttg ataaagttcg cggtcagcgt cttcgtccgg acggtcgata
     5521 tacggcggca gcggcatatg gccgatactg ttgaggatat ccagtaccga acgatcatca
     5581 ttgaattcga cttcaaacag tgcgccgtgg cgcgcggtca ttgttgcgtt aatactttcg
     5641 tcatcgccca gcagcagttc tgcgccaggt tttggcgctt tcgaggcgcg aatatgcgca
     5701 agaatgcgtt tgtcgtcgag catccgctca accagcactt caatcttgcc gccgctggct
     5761 ttacgcccaa acaggcgcgc cgggatcacg cgagtattat taaaaaccag aagatcaccg
     5821 gggttgagct tatcgagtaa atcggtgaaa gtaccgtgcg tcagcgcgcc cgtaggcccg
     5881 tccagcgaca gtaaacgaca gctactgcgt tcaggcatgg ggtagtgggc aatcagggat
     5941 tcgggcaatt caaaggagaa atcggtaacg cgcatgacac tgactcagac taaaataaga
     6001 ggcgggtagt ctagtgccgg ggcgctctcc ctgcaacctt tacccccctt tggatagaat
     6061 ataatcgatg aattttttag ctcacctgca tttagcccat ctcgcggaaa gctcgctttc
     6121 cggcaattta ctggctgatt tcgtacgcgg aaatcctgaa gaaagttttc cgcccgacgt
     6181 cgtggctggc attcatatgc atcgacgtat cgacgtattg actgacaatc tgccggaagt
     6241 ccgcgaagca cgggagtggt ttcgtcgtga aacgcgccgc gttgcgccta ttacgctgga
     6301 tgtcatgtgg gatcactttc tttcccgcca ctggtcgcag ctgtcgccgg actttccgct
     6361 acaggaattt atctgttatg cccgcaagca agtgatgacg attttgccgg actcaccgcc
     6421 acgttttatc aatctaaaca attacttgtg gtcagagcag tggctggtgc gctatcgcga
     6481 tatggatttc atccagaacg tgttaaacgg catggcaagc cgtcgcccac gtctggatgc
     6541 cctgcgtgac tcctggtacg atttaaacgc ccattatacc gccctcgaaa cccgcttctg
     6601 gcagttttat ccgcggatga tggcgcaggc gtcacacaag gcgttataaa acgttagttc
     6661 atccataccg tagccgaaat ggcaggcaaa gccagaatcc cgtcagtcag ttgcccatgc
     6721 ccttctttgc attgccattg cacggcattg agaaacggtg acgcgggtag caccacttca
     6781 caggcctcgc cacggttgat tgccaccagt acacgttgct gattcagcac gcggacaaat
     6841 accactacgt tatcttccgc atacagcacc tgacagccgc cacgacgcag cgcctgactt
     6901 ttcttacgca gcacaatcat tcgccggtac agcgcgaata acgccgtatc ctgcttttcc
     6961 acctgccagg ggaacggttt acggcaaaac ggatcgtttt taccatccag tcccacttca
     7021 tcaccgtaat aaatgcacgg tacaccaggc caggtgaaca gccagaccac cgccagcggc
     7081 aggcgcgcaa tatcccgacc gagcagcgtt ttaaatcgcg cagtatcgtg gctgtcgagc
     7141 tgattaaaca tacgtaattg ttgttgatga gaaagccctg cgcggtaatt atccatccag
     7201 gccatacagg tttgggcatc aatttactgc ggatcgtaag agatatcggt attggcaaga
     7261 aatccccaca acgggaatgt gaagccacga tagttcatgg cggcatcttc cacatcggcc
     7321 tgtaaccatt gccgtgcatc gccaaaatgt tcgccgacaa tatacgcttc cggctgggtt
     7381 tctttcgccg cttcggtgat cccagcaacg tgctgcatat tattgcgcgc cccacccgcc
     7441 tcccccagca tatgcaccac atccagccgc cagccgtcca tactccacgg cgctttcagc
     7501 caatggcgga caatactgtc ttccccgcga taaatttcat tcaccagact ttccgactga
     7561 taatccagct tcggcaagct ggcatagcca agccagtcga gcgccgtgcc atcatcacta
     7621 aacgagtacc agtcgcgcca gggcgattca gggttgtgac aagctccccc cgtgccacga
     7681 ttgtgcctgt caaaccaggc atgggaatcg ccactgtggt taaacacgcc gtccagcacc
     7741 agccgcattc ccagctgctg cgtattgtgt cgcaaacgca gcaacgcccc atcaccgcca
     7801 aactgcggat cgacatggcg ataatcctcg gtatcgtatt gatgtacgct gggagcttta
     7861 aacaccggat tgagatacag cgctgtcacg ccaagctttt tcagatacgg cagtttttcg
     7921 cttatcccgt ccagatcgcc gccatagaac gttgatctgc ccgcctgcgc cgtgaccggt
     7981 tcatcccagt cacgcaagat gatctcttgt ccggctgcat gatggtaata gacatgatcc
     8041 tgttcagctt cacgaggaag actacgcgca aaacgatcag ggaagatctg ataaaaaatc
     8101 tgatccgcag cccattgtgg gccgatatcc ggtacatcga cggcaaactg ctccagtcgt
     8161 gccggcggca ttcggctgaa gccctgcggt gacgcctggc tgcggctgac tgcgctgctt
     8221 atgcattggt actgacattt cttcgttatc gtgttctgta cgcagcataa tgcgctgcgg
     8281 tgggtcttcg cccgtcagcc acagtgtaat gagcagttga tctttgcttt gtttaacaaa
     8341 tgggggcacc ggcaggtgcc atgcatttaa catcataatt cccctgtgat gaaaatctga
     8401 tcaccttgcc atagcctaat gcaggatcac tcatcatctg aaggatattt gggggaggag
     8461 gacgggggcg gataactttc ggaatagccg gatcaggatt tcctcctgaa ccggcttaca
     8521 gaacgcaagg attactggtt ttcagccagc tgacgatcgt ggcgacgctt aaacatccag
     8581 ccaatcaaca gcacaacaat ccacgcgaaa ccgacataca gcgagatacg cgtatccggg
     8641 tgataaccaa tcaacccgat aataaagagc aggaaaatca gcccgccgat ggtcgttgct
     8701 accccacccg gcactttaaa tttcagcgcc ttaacttctt ctggcggcaa acggcgacgg
     8761 aaggcgattt gcgacagcag gatcataatc cacacccata ccgtggcgaa ggttgccagc
     8821 gaagcgatca ccaggaagac gttttccggc atgatgtagt tcagatacac cgcaaacagc
     8881 agcgcggtag tcatcaccag caccgtaacc cacggaatac cgcgacgcga cgttttgctg
     8941 aaaattttcg gtgcgctgcc ctgctctgcc ataccgtgga gcatacggcc tacgccaaat
     9001 acgtcactgt taattgccga cagcgaagcg gtcagcacaa caaagttaag aatgctggcg
     9061 gcaaaggtaa tgcccatatg ctggaacgtc agcacgaacg ggctaccggc agtgccaacc
     9121 tgattccacg ggtagataga cataatgacg aacagcgtac cgacgtagaa caccagaata
     9181 cgcatcggca cggagttaat cgcacgcgga atcgatttct caggatcttt cgcttcaccg
     9241 gcggtaatcc cgataatttc gatcccaccg taagcaaaca tcaccatttg caacgacatt
     9301 accatgccaa gccagccgtt actgaagaag ccgccgttgc tccacaggtt atgaataccg
     9361 gtcggttgcc cgccgttgcc aatcccccag atgatgatgc cgaaaccggc gacaatcatg
     9421 atgatgatgg tggcgacttt aaagaacgag aaccagaatt ccagctcacc gaataccttc
     9481 acgctcatca ggtttacggc gcaaatgatc agcaccacgc tcagtaccca aatccagtgc
     9541 ggcaccgtcg ggaaccagac acccatatag ataccaaaag cggtcacatc ggcgatggcg
     9601 acaattagga tttcaaagca gtaggtccag ccggtaatgt aacctgccag cgggccgagg
     9661 ttttcctgcg cataacgcga gaaagagctg gcggccgggt tatgtaccga catttccccc
     9721 agcgcacgca taatgatata cgccgcgata ccaccgataa tataggccaa caacacgctc
     9781 ggaccggcca ttttgatggc gtctgccgaa ccgtaaaaca gcccggtgcc aattgctgaa
     9841 cccagtgcca taaagcgtat gtggcgggta cttagcccac gctttagctt gttcttactt
     9901 tccatcaatt cctaacccat caacacaata aaaaaccacg gggcatcgca gccccgtggt
     9961 taaaacaaat gttcagtgat ttagtgagcg ctggaggtca cctgacgacc tgccgcgcga
    10021 tcccagataa tggccagaac caccatcacc actgttggca ttaaccacgc caggccttgt
    10081 tcggccagcg gtaaacgctg cgcccaggac ggtaagatat cgctgaatgc agatgctttg
    10141 atcccgtcga gaataccaaa aagcaggctg ataaacatcg gcggggcaat cacgcgggac
    10201 gaattatgcc accatgagcg tgtaaaactt aatacaacca gtgcgataca cggcggataa
    10261 atagcggtca gcaccggtac ggagatctgg atcagctggc ttaagccgag gttagacacc
    10321 accatcgaga agccgccgag gataaacacc agcgtacgat aagagagcgg tacgtactgg
    10381 gcaaagaatt ctgcacaagc acaggtcagg ccaactgccg ttaccaggca ggcgatgaag
    10441 attaacgccg ccagcaggaa gctaccgccg ccgccaaatg tgtgctgaac gtaagcatgc
    10501 agaatagcag cgccgtttgc agactgatcg accagcgacg cgctgtctga acccagacgg
    10561 aacagcgcca ggtacagcag agtcagacca acacccgcca tcaggccagc ccagacggta
    10621 taacgggtca gcagacgcgc ttcggtaacg ccacgagaac gcgccgcgtt aacaataacg
    10681 ataccaaaca ccattgcgcc cagcgtatcc atggtcagat agccgttaac gaagccgtta
    10741 gaaaacgcag cgttttgata agcctcagtc gccgtgctga tagaacccgc cggccagaca
    10801 atagcggcaa cagacaggat gaccagcgcg ataattttca gcggcgcaag gaagttgccc
    10861 acggtatcca gcagcttgcc cggatagagc gaaaccagaa taacgatagc gaaatagacc
    10921 aagctgtaga taaacagcgg cagcgcggaa tcacccgtca gcggcgcaat ccccacttca
    10981 aaggaaacgg tagctgtacg cggcgtagcg aaaagcggcc ccaccgccaa gtaacaaacc
    11041 gttgccagca gcacgccagc gactttaccg attggcgtgc tgaggctgtc aacaccgccg
    11101 ccaacttttg ccagcgccac taccgttaat accggcaggc caacggcagt aatgaggaag
    11161 ccgaatgccg cagtccagac gtgttcgcct gcctgcaagc cgaccattgg agggaaaata
    11221 atgttacctg cgccgacgaa caacgcaaat gtcataaagc ccagagcgat gatatcgcgc
    11281 gatcttaatt gatgggtcat aaatcatact gcctgtggat gtggtgttgt aacgttaaat
    11341 ttttgtgcca atacctgggg atgatacagc ggtatattta aacaatttta gcgggaaata
    11401 ctcccaacca ggcgcggcga agaatagttt ttcgatttac cgcgttaatg cagtcagtat
    11461 gacagcacct gaagcgcaat ttaaacgctt ataacgtttt aaagcaagga gggatctaaa
    11521 aaccagaggt atatagcgat aagaaatcac caaccagtat aaaacactat ttccgtgaaa
    11581 aagacatggc taatcatgcg aacaaaaaat caccaaccgt tgtaaaatct aacgcccgta
    11641 ttttgactgc aaagaaaata agccagcatc gactggctta tggcaataaa agatgacaaa
    11701 ggcggattaa tcgctgtttt tggcaattaa acgttccggg ataacaaaac tgaaacgtgt
    11761 tccttttcct actgtactct caatattcag gcgactttcg tgatgattca cagcatgttt
    11821 cacgatcgct aaccctaatc cgctaccgcc ggtttgccgg gaacgcgctt tatcaacgcg
    11881 ataaaaacgc tcggtcaggc gcggaatatg ctccggtgca atgcccggtc cgttatcttc
    11941 aacgctaaat tcggcaccgt gcggcactcg ctgccagcgt acggtgatat gcgtgccttc
    12001 tggagtatga ttcacggcgt tatagaccag gttcgaaatc gcactgcgta gctgatcttc
    12061 gttgccagac actttgaggc cgttatctat ctcaaaggta aatgtctgtt ttttctgact
    12121 cagagtctga gcctcgcgct caacaacgcg cagcatcatc ggcacatcaa ccttttcatt
    12181 gagcaattgc gtcggcgcgg cttcaatttt cgacagcgtt agcaactgct tcaccagccc
    12241 ttccatccgc tgggtctgct cgcgcatggt gtgcaacgct ttttcgcgta ccgcgccttc
    12301 cagcggctgc tcatccatca tctccaggta accctgtaac acggtcaatg gcgtacgtaa
    12361 ctcatggctc acgttggcaa aaaagttacg ccgcgcccct tccagttgat gcatttgcgt
    12421 gacatcacgc gccaccatca gcaactgttt gtgggtataa ggcatgacgc gaatttccag
    12481 atgccgcccg gtgttgagca ccagattgag cgggcgagaa aaatcacgcg ttttcagata
    12541 ttgcgtaaac tccgggtaac gcagtaggtt aaggatgttc tgcccgttat cttccggcca
    12601 gcgcaaacca agaatttgtt gcgccagacc gttacaccag aaaataccgc cctcttccgt
    12661 ggtcagcacc accgcgtcgg gcagcgactc cgcgccgcta cgaaagcgtt taatcagatt
    12721 gcccagttca cggcggcgtt ttttatttcg cagctgcatc tggtgtaagc cgtatagtag
    12781 cggttcccag ctaccacgcc ccggtggcgg ggtcatactg cgatccaccc acaaccacca
    12841 tgaaaggcgc aataaattcc agaaatgcca gataagcagt cctgttaccg atgccagcaa
    12901 aaaccagggc aggtaaccaa aaaatgcacc caggatgaaa gccgggaggc agcaaagtag
    12961 cagctccagc accagccttt tccacgacag ccattccagc acgtaagata ctccagttaa
    13021 gaaatcataa gccctgctct gcgtccgatg agcaaggcgt taaaagcggg ttgaaaaacg
    13081 atatcctgta ccgcgcacgg tctgcaccat gcggtcatgc ccgccgggct ccagtgcttt
    13141 acgcaggcga cgaatgtgga catcgaccgt gcggtcttcc acatacacgt tagttcccca
    13201 gacgtggttt aacagctgct cgcggctgta cacgcgctca ggatgcgtca taaaaaagtg
    13261 cagcagttta aattctgtcg gccccatctc cagcggctct tcgcccacca tcactcggtg
    13321 agatgtcggg tcgagactta atccctgcat ctcaatcacc tcttccaccg ccattggcga
    13381 aatacggcgc attaccgctt tgattcgcgc caccagctcc ttcggcgaaa acggcttggt
    13441 gatatagtca tccgcgccgg tttcaaggcc gcgcacgcga tcttcttctt cccctctggc
    13501 ggtcaacatc accactggaa tatcccgggt catcgactcg cgcttgaggt gtttgatgaa
    13561 ctggataccg gagccgccag gtaacatcca gtcaaggaga attaaatccg gccagggttc
    13621 attcagttga ttcacagcac tgtcataatc ttccgcttcg accggctgaa agccattttg
    13681 ttcgagcacg aagcagacca tttcgcgaat tggagcttca tcttctacga ccagaatacg
    13741 tctcgccatg atttgccctg ttgtaataaa taggttgcga tcattaatgc gacgtcatta
    13801 tgcgtcagat ttatgacaga tttatgaaaa gctcgtcgca catatcttca ggttattgat
    13861 ttccgtggcg cagaaaaaag caaatggcac atctgtttgg gtataatcgc gaccatgctt
    13921 tttcgccagg gaaccgttat gcgcatcctt cacacctcag actggcatct cggccagaac
    13981 ttctacagta aaagccgcga agctgaacat caggcttttc ttgactggct gctggagaca
    14041 gcacaaaccc atcaggtgga tgcgattatt gttgctggtg atgttttcga taccggctcg
    14101 ccgcccagtt acgcccgcac gttatacaac cgttttgttg tcaatttaca gcaaactggc
    14161 tgtcatctgg tggtactggc aggaaaccat gactcggtcg ccacgctgaa tgaatcgcgc
    14221 gatatcatgg cgttcctcaa tacaaccgtg gtcgccagcg ccggacatgc gccgcaaatc
    14281 ttgcctcgtc gcgacgggac gccaggcgca gtgctgtgct ccattccgtt tttacgcccg
    14341 cgtgacatta tttccagcca ggcggggctt aacggtattg aaaaacagca gcatttactg
    14401 gcagcgatta ccgattatta ccaacaacac tatgccgatg cctgcaaact gcgcggcgat
    14461 cagcctctgc ccatcatcgc cacgggacat ttaacgaccg tgggtgccag taaaagtgac
    14521 gccgtgcgtg acatttatat tggcacgctg gacgcgtttc cggcacaaaa ctttccacca
    14581 gccgactaca tagcgctcgg gcatattcac cgcgcacaga ttattggcgg catggaacat
    14641 gttcgctatt gcggttcccc cattccactg agttttgatg aatgcggtaa gagtaaatat
    14701 gtccatctgg tgacattttc aaacggcaaa ttagagagcg tggaaaacct gaacgtaccg
    14761 gtaactcaac ccatggcggt gctgaaaggc gatctggcgt cgattaccgc acagctggaa
    14821 cagtggcgcg atgtatcgca ggagccacct gtctggctgg atatcgaaat cactactgat
    14881 gagtatctgc atgatattca gcgcaaaatc caggcattaa ccgaatcatt gcctgtcgaa
    14941 gtattgctgg tacgtcggag tcatgaacag cgcgagcgtg tgttagccag ccaacagcgt
    15001 gaaaccctca gcgaactcag cgtcgaagag gtgttcaatc gccgtctggc actggaagaa
    15061 ctggatgaat cgcagcagca acgtctgcag catcttttca ccacgacgtt gcataccctc
    15121 gccggagaac acgaagcatg aaaattctca gcctgcgcct gaaaaacctg aactcattaa
    15181 aaggcgaatg gaagattgat ttcacccgcg agccgttcgc cagcaacggg ctgtttgcca
    15241 ttaccggccc aaccggtgcg gggaaaacca ccctgctgga cgccatttgt ctggcgctgt
    15301 atcacgaaac tccgcgtctc tctaacgttt cacaatcgca aaatgatctc atgacccgcg
    15361 ataccgccga atgtctggcg gaggtggagt ttgaagtgaa aggtgaagcg taccgtgcat
    15421 tctggagcca gaatcgggcg cgtaaccaac ccgacggtaa tttgcaggtg ccacgcgtag
    15481 agctggcgcg ctgcgccgac ggcaaaattc tcgccgacaa agtgaaagat aagctggaac
    15541 tgacagcgac gttaaccggg ctggattacg ggcgcttcac ccgttcgatg ctgctttcgc
    15601 aggggcaatt tgctgccttc ctgaatgcca aacccaaaga acgcgcggaa ttgctcgagg
    15661 agttaaccgg cactgaaatc tacgggcaaa tctcggcgat ggtttttgag cagcacaaat
    15721 cggcccgcac agagctggag aagctgcaag cgcaggccag cggcgtcgcg ttgctcacgc
    15781 cggaacaagt gcaatcgctg acagcgagtt tgcaggtact tactgacgaa gaaaaacagt
    15841 tacttaccgc gcagcagcaa gaacaacaat cactaaactg gttaacgcgt ctggacgaat
    15901 tgcagcaaga agccagccgc cgtcagcagg ccttgcaaca ggcgttagcc gaagaagaaa
    15961 aagcgcaacc tcaactggcg gcgctcagtc tggcacaacc ggcacgaaat cttcgtccgc
    16021 actgggaacg catcgcagaa cacagcgcgg cgctggcgca tactcgccag cagattgaag
    16081 aagtaaatac tcgcttacag agcacaatgg cgcttcgcgc gagcattcgc caccacgcgg
    16141 cgaagcagtc agcagaatta cagcagcagc aacaaagcct gaatacctgg ttacaggaac
    16201 acgaccgctt ccgtcagtgg aacaacgaac tggcgggttg gcgtgcgcag ttctcccaac
    16261 aaaccagcga tcgcgagcat ctgcggcaat ggcagcaaca gttaacccat gctgagcaaa
    16321 aacttaatgc gcttgcggcg atcacgttga cgttaaccgc cgatgaagtt gctaccgccc
    16381 tggcgcaaca tgctgagcaa cgcccactgc gtcagcgcct ggtcgcgctg catgggcaga
    16441 ttgttcccca acaaaaacgt ctggcgcagt taatggtcac tatccagaat ggatctctgg
    16501 aacagacgca acgtaatgtc gcacttaacg aaatgcgcca gcgttataaa gaaaagacgc
    16561 agcaacttgc cgatgtgaaa accatttgcg agcaggaagc gcgcatcaaa acgctggaag
    16621 cccagcgtgc acagttacag gcgggtcagc cttgtccact ttgtggttcc accagccacc
    16681 cggcggtcga ggcgtatcag gcgctggagc ctggtgttaa tcagtctcga ttactggcgc
    16741 tggaaaacga agttaaaaag ctcggcgaag aaggtgcggc gctgcgcggg caactggatg
    16801 cattaacgaa gcagcttcag cgcgatgaaa acgaagcgca aagcctccga caagatgagc
    16861 aagcacttac tcaacaatgg caagccgtca cggccagcct caatatcacc ttgcagccac
    16921 aggacgatat tcaaccgtgg ctggatgcac aagatgagca cgaacgccag ctgcggttac
    16981 tcagccaacg acatgaatta caagggcaga ttgccgcgca taatcagcaa attatccagt
    17041 atcaacagca aattgaacaa cgccagcagc agctcttaac ggcattggcg ggttatgcac
    17101 tgacattgcc acaggaagat gaagaagaga gctggttggc gacacgtcag caagaagcgc
    17161 agagctggca gcaacgccag aacgaattaa ccgcgctgca aaaccgtatt cagcagctga
    17221 cgccgattct ggaaacgttg ccgcaaagtg atgatctccc gcacagcgaa gaaactgtgg
    17281 cgctggataa ctggcggcag gttcatgaac aatgtctcgc attacacagc cagcagcaga
    17341 cgttacagca acaggatgtt ctggcggcgc aaagtctgca aaaagcccag gcgcagtttg
    17401 acaccgcgct acaggccagc gtctttgacg atcagcaggc gttccttgcg gcgctaatgg
    17461 atgaacaaac actaacgcag ctggaacagc tcaagcagaa tctggaaaac cagcgcagtc
    17521 aggcgcaaac gctggtcact cagacagcag aaacgctggc acagcatcaa caacaccgac
    17581 ctgacgggtt ggctctcact gtgacggtgg agcagattca gcaagagtta gcgcaaactc
    17641 accaaaagtt gcgtgaaaac accacgagtc aaggcgagat tcgccagcag ctgaagcagg
    17701 atgcagataa ccgtcagcaa caacaaacct taatgcagca aattgctcaa atgacgcagc
    17761 aggttgagga ctggggatat ctgaattcgc taataggttc caaagagggc gataaattcc
    17821 gcaagtttgc ccaggggctg acgctggata atttagtcca tctcgctaat cagcaactta
    17881 cccggctgca cgggcgctat ctgttacagc gcaaagccag cgaggcgctg gaagtcgagg
    17941 ttgttgatac ctggcaggca gatgcggtac gcgatacccg taccctttcc ggcggcgaaa
    18001 gtttcctcgt tagtctggcg ctggcgctgg cgctttcgga tctggtcagc cataaaacac
    18061 gtattgactc gctgttcctt gatgaaggtt ttggcacgct ggatagcgaa acgctggata
    18121 ccgcccttga tgcgctggat gccctgaacg ccagtggcaa aaccatcggt gtgattagcc
    18181 acgtagaagc gatgaaagag cgtattccgg tgcagatcaa agtgaaaaag atcaacggcc
    18241 tgggctacag caaactggaa agtacgtttg cagtgaaata actattcagc aggataatga
    18301 atacagaggg gcgaattatc tcttggcctt gctggtcgtt atcctgcaag ctatcacttt
    18361 attggctacg gtgattggta gccgttctgg tggttgtgat gatggtatga aaaaagtcat
    18421 tttatctttg gctctgggca cgtttggttt ggggatggcc gaatttggca ttatgggcgt
    18481 gctcacggag ctggcgcata acgtaggaat ttcgattcct gctgccgggc atatgatctc
    18541 gtattatgca ctgggggtgg tggtcggtgc gccaatcatc gcactctttt ccagccgcta
    18601 ctcactcaaa catatcttgt tgtttctggt ggcgttgtgc gtcattggca acgccatgtt
    18661 cacgctctct tcgtcttacc tgatgctcgc cattggtcgg ctggtatccg gctttccgca
    18721 tggcgcattt tttggcgtcg gcgcgatcgt gttatcaaaa attatcaaac ccggaaaagt
    18781 caccgccgcc gtggcgggga tggtttccgg gatgacagtc gccaatttgc tgggcattcc
    18841 gctgggaacg tatttaagtc aggaatttag ctggcgttac acctttttat tgatcgctgt
    18901 ttttaatatt gcggtgatgg catcggtcta tttttgggtg ccggatattc gcgacgaggc
    18961 gaaaggaaag ctgcgcgaac aatttcactt tttgcgcagc ccggccccgt ggttaatttt
    19021 cgccgccacc atgtttggca acgcaggtgt gtttgcctgg ttcagctacg taaagccata
    19081 catgatgttt atttccggtt tttcggaaac ggcgatgacc tttattatga tgttagttgg
    19141 gctagggatg gtgctgggaa atatgctaag tggcaggatt tcaggacgtt attcaccact
    19201 gcgcattgca gcagtgactg actttataat tgtactggca ctgctgatgc tctttttctg
    19261 cggcggcatg aaaacaacgt cgcttatttt tgcttttatt tgttgcgcgg gattatttgc
    19321 cctttcagca ccgctacaaa tattgttact acaaaacgcc aaaggcggag agttattagg
    19381 tgccgcaggt gggcaaatag cgtttaacct cggtagcgcc gtcggcgcat attgcggtgg
    19441 tatgatgctg acgctggggc tggcatataa ttacgtggcg ctgcctgccg ccctgctttc
    19501 gtttgctgcg atgtcgtcgt tgctgctgta tggtcgctat aagcgccagc aagcggcgga
    19561 tactccggtg ctggcgaaac cactggggta ggttatagtc tcggtgttca ttacttattg
    19621 ccggatgcgg cgtgaacgcc ttatccgccc tacgcggttc tggcacattt tgcaggcctg
    19681 ataagacgcg gcaagcgtcg catcaggcat gatgcgccaa ttgcctacgt tttttactct
    19741 tgtggccata accacgcagc gccgcgtacg ccgctggaat caccgtgctt cgccttacgc
    19801 accggcgttt cacattcgcc gccgaagaca aattgtttaa tcaactgcgg aaccgtttga
    19861 tataaacggt ctacattgct cat
//
LOCUS       DADMHC010000062        19742 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.062, whole genome shotgun sequence.
ACCESSION   DADMHC010000062 DADMHC010000000
VERSION     DADMHC010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19742)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19742)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19742
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.062"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            57..832
                     /locus_tag="JNZ57_001850"
                     /pseudo
     CDS             57..832
                     /locus_tag="JNZ57_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000200160.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit EutC"
     gene            842..1501
                     /gene="eutL"
                     /locus_tag="JNZ57_001851"
     CDS             842..1501
                     /gene="eutL"
                     /locus_tag="JNZ57_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutL"
                     /protein_id="HAY8828087.1"
                     /translation="MPALDLIRPSVTAMRVIASVNAEFARELKLPPHIRSLGLISADS
                     DDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDA
                     MVAHIENGAAFQWANDAENTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATY
                     GIDAALKSADVQLVTYVPPPSETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQR
                     A"
     gene            1514..2014
                     /gene="eutK"
                     /locus_tag="JNZ57_001852"
     CDS             1514..2014
                     /gene="eutK"
                     /locus_tag="JNZ57_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutK"
                     /protein_id="HAY8828088.1"
                     /translation="MINALGLLEVDGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTL
                     VVEGDLAACRAALDAGCAAAMRTGRVISRKEIGRPDDDTQWLVTGFNRQPKQPVREPD
                     APVIVAESADELLALLTSVRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRSSR
                     YRLKPH"
     gene            2060..3112
                     /gene="eutR"
                     /locus_tag="JNZ57_001853"
     CDS             2060..3112
                     /gene="eutR"
                     /locus_tag="JNZ57_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator EutR"
                     /protein_id="HAY8828089.1"
                     /translation="MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHA
                     LTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPA
                     TRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPD
                     RVLHMLRSQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMG
                     AMLEDAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNA
                     FHAILGIGPNAWLKRIRLNAVRRELISPWSQSTTVKDAAMQWGFWHLGQFVTDYQQLF
                     AEKPSLTLHQRMREWG"
     gene            complement(3118..4017)
                     /gene="hemF"
                     /locus_tag="JNZ57_001854"
     CDS             complement(3118..4017)
                     /gene="hemF"
                     /locus_tag="JNZ57_001854"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HAY8828090.1"
                     /translation="MKPDAHQVKQFLLNLQDTICQQLTAVDGAKFVEDSWQREAGGGG
                     RSRVLRNGGVFEQAGVNFSHVHGEAMPASATAHRPELAGRSFEAMGVSLVVHPHNPYV
                     PTSHANVRFFIAEKPGAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVY
                     PRYKKWCDDYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVE
                     RRKAMAYGERERNFQLYRRGRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEY
                     DYQPKDGSPEAALSEFIKVRDWV"
     gene            complement(4021..4890)
                     /gene="amiA"
                     /locus_tag="JNZ57_001855"
     CDS             complement(4021..4890)
                     /gene="amiA"
                     /locus_tag="JNZ57_001855"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiA"
                     /protein_id="HAY8828091.1"
                     /translation="MSTFKPLKTLTSRRQVLKAGLAALTLSGMSQAIAKDEPLKTSNG
                     HSKPKAKKSGGKRVVVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDA
                     RLTRSGDTFIPLYDRVEIAHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMA
                     KYLSERENRADEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKL
                     HSRNTEQAAFVVLKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYF
                     HWFDNQKAHSKKR"
     gene            5104..5529
                     /locus_tag="JNZ57_001856"
     CDS             5104..5529
                     /locus_tag="JNZ57_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase YpeA"
                     /protein_id="HAY8828092.1"
                     /translation="MEIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSL
                     FLVAEVNGEVVGTVMGGYDGHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK
                     IQINVPEDNDMVLGMYERLGYEHADMLSLGKRLIEDEEY"
     gene            5516..5965
                     /locus_tag="JNZ57_001857"
     CDS             5516..5965
                     /locus_tag="JNZ57_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708284.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2919 domain-containing protein"
                     /protein_id="HAY8828093.1"
                     /translation="MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFIIAGASR
                     EQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLSGRRASFPRTWHVLYFLLLLAQVVL
                     LCWQPWLWLNGESVSGIGLALVVADIVELIWLLTNRRLRACFNEEKE"
     gene            6172..6747
                     /locus_tag="JNZ57_001858"
     CDS             6172..6747
                     /locus_tag="JNZ57_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpoE-regulated lipoprotein"
                     /protein_id="HAY8828094.1"
                     /translation="MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQ
                     GVGELTASTPLQEQAIADALDGDYRLRSGMKTANGNVVRFFEVMKGDNVAMVINGDQG
                     TISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISY
                     QFSGEWRGPEGLMPSDDTLKNWKVSKIIWRR"
     gene            6843..7742
                     /gene="yfeX"
                     /locus_tag="JNZ57_001859"
     CDS             6843..7742
                     /gene="yfeX"
                     /locus_tag="JNZ57_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311329.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphyrinogen peroxidase"
                     /protein_id="HAY8828095.1"
                     /translation="MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATF
                     EAKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLR
                     HDVNFSVAQAAMEAFGDCIEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVI
                     KDGVDAGGSYVFVQRWEHNLKQLNRMSVHDQEMMIGRTKEANEEIDGDERPETSHLTR
                     VDLKEDGKGLKIVRQSLPYGTASGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAM
                     LCFTKPVTGGYYFAPSLDKLMAL"
     gene            complement(7800..9104)
                     /gene="pbp4b"
                     /locus_tag="JNZ57_001860"
                     /pseudo
     CDS             complement(7800..9104)
                     /gene="pbp4b"
                     /locus_tag="JNZ57_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311328.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin binding protein PBP4B"
     gene            complement(9109..10533)
                     /gene="murP"
                     /locus_tag="JNZ57_001861"
     CDS             complement(9109..10533)
                     /gene="murP"
                     /locus_tag="JNZ57_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetylmuramic acid transporter subunit
                     IIBC"
                     /protein_id="HAY8828096.1"
                     /translation="MAKEISSELLNTILTRVGGPGNIASCGNCMTRLRLGVHDSSLVD
                     PNIKTLEGVKSVILTSDQVQVVFGPGKAHRAAKAMSELLGEAPVQDAAEIAAQNKRQL
                     KAKQTSGVQQFLAKFATIFTPLIPGFIAAGLLLGIATLIATVMHVPADAQGTLPDALN
                     FMKVFSKGLFTFLVILVGYNAAQAFGGTGVNGAIIAALFLLGYNPAATTGYYAGFHDF
                     FGLPIDPRGNIIGVLIAAWACARIEGMVRRFMPDDLDMLLTSLITLLITATLAYLIIM
                     PLGGWLFEGMSWLFMHLNSNPFGCAVLAGLFLIAVVFGVHQGFIPVYLALMDSQGFNS
                     LFPILSMAGAGQVGAALALYWRSQPHSALRSQVRGAIIPGLLGVGEPLIYGVTLPRMK
                     PFVTACLGGTAGGLFIGLIAWWGLPMGLNSAFGPSGLVALPLMTSAQGILPAMAVYAG
                     GILVAWVCGFIFTTLFGCRNVNLD"
     gene            complement(10537..11433)
                     /gene="murQ"
                     /locus_tag="JNZ57_001862"
     CDS             complement(10537..11433)
                     /gene="murQ"
                     /locus_tag="JNZ57_001862"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HAY8828097.1"
                     /translation="MQLEKMITEGSNAASAEIDRVSTLEMCRIINDEDKTVPLAVERV
                     LPDIAAAIDVIHAQVSGGGRLIYLGAGTSGRLGILDASECPPTYGVKPGLVVGLIAGG
                     EYAIQHAVEGAEDSREGGVNDLKNINLTAQDVVVGIAASGRTPYVIAGLEYARQLGCR
                     TVGISCNPGSAVSTTAEFAITPIVGAEVVTGSSRMKAGTAQKLVLNMLSTGLMIKSGK
                     VFGNLMVDVVATNEKLHVRQVNIVKNATGCNAEQAEAALIACERNCKTAIVMVLKNLD
                     AAEAKKRLDQHGGFIRQVLDKE"
     gene            11597..12454
                     /gene="murR"
                     /locus_tag="JNZ57_001863"
     CDS             11597..12454
                     /gene="murR"
                     /locus_tag="JNZ57_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MurR"
                     /protein_id="HAY8828098.1"
                     /translation="MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQL
                     GISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNTTALHLHSSITSDDSLEVIA
                     RKLNREKELALEQTCALFDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKI
                     GYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSL
                     ADSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVASLKMIQR
                     SSELTQRLK"
     gene            12583..13374
                     /gene="ucpA"
                     /locus_tag="JNZ57_001864"
     CDS             12583..13374
                     /gene="ucpA"
                     /locus_tag="JNZ57_001864"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase UcpA"
                     /protein_id="HAY8828099.1"
                     /translation="MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEK
                     LADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMS
                     DDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKA
                     AIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPM
                     RRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLPETVSVGI"
     gene            13545..14561
                     /locus_tag="JNZ57_001865"
     CDS             13545..14561
                     /locus_tag="JNZ57_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8828100.1"
                     /translation="MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALN
                     PPFEQQWAKDNGGDKLTIKQSHAGSSKQVLAILQGLKTDVVTYNQVTDVQILHDKGKL
                     IPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARY
                     TYLAAWGAADKADGGDKAKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFE
                     SEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQA
                     QTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLA
                     AGRN"
     gene            14561..15394
                     /gene="cysT"
                     /locus_tag="JNZ57_001866"
     CDS             14561..15394
                     /gene="cysT"
                     /locus_tag="JNZ57_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000458418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter permease
                     CysT"
                     /protein_id="HAY8828101.1"
                     /translation="MFAVSSRRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSW
                     AQYWEVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDL
                     PFALPTAVAGLTLASLFSVNGFYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQ
                     PVLEELGPEYEEAAETLGATRWQSFCKVVLPELSPALVAGVALSFTRSLGEFGAVIFI
                     AGNIAWKTEVTSLMIFVRLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGRRVVG
                     H"
     gene            15394..16269
                     /gene="cysW"
                     /locus_tag="JNZ57_001867"
     CDS             15394..16269
                     /gene="cysW"
                     /locus_tag="JNZ57_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026168.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter permease
                     CysW"
                     /protein_id="HAY8828102.1"
                     /translation="MAEVTQLKRYDARPINWGKWFLIGIGMLVSAFILLVPMIYIFVQ
                     AFSKGLMPVLQNLADPDMLHAIWLTVMIALIAVPVNLVFGILLAWLVTRFNFPGRQLL
                     LTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQIMFSWPGMVLVTIFVTCPF
                     VVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEF
                     GAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRL
                     ENQEKRAQQEEHHEH"
     gene            16259..17356
                     /gene="cysA"
                     /locus_tag="JNZ57_001868"
     CDS             16259..17356
                     /gene="cysA"
                     /locus_tag="JNZ57_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter ATP-binding
                     protein CysA"
                     /protein_id="HAY8828103.1"
                     /translation="MSIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTL
                     LRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVL
                     PRRERPNSAAIKAKVTKLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLL
                     DEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSLGNIEQA
                     DAPDQVWREPATRFVLEFMGEVNRLQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLR
                     PWEVDISRRTSLDSPLPVQVLEASPKGHYTQLVVQPLGWYNEPLTVVMHGDDAPQRGE
                     RLFVGLQHAWLYNGDERIETRDEELALAQSA"
     gene            17490..18401
                     /gene="cysM"
                     /locus_tag="JNZ57_001869"
     CDS             17490..18401
                     /gene="cysM"
                     /locus_tag="JNZ57_001869"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase B"
                     /protein_id="HAY8828104.1"
                     /translation="MSTLEQTIGNTPLVKLQRMGPNNGSEVWLKLEGNNPAGSVKDRA
                     ALSMIVEAEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAA
                     MRAYGAELILVTKEQGMEGARDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQ
                     QTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPAEYLP
                     GIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAKANPGAVVV
                     AIICDRGDRYLSTGVFGEEHFSQGAGI"
     gene            complement(18404..18772)
                     /locus_tag="JNZ57_001870"
     CDS             complement(18404..18772)
                     /locus_tag="JNZ57_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfeK family protein"
                     /protein_id="HAY8828105.1"
                     /translation="MKKIICLVITLLMTLPAYAKLTAHEEARINAMLEGLSQKKDLIF
                     VRNGDEHTCDEAVSHLRLKLGNTRNRIDTAEQFIDKVASSSSITGKPYIVKIPGKSDE
                     NAQPFLHALIAQTDKTVPAQ"
     gene            18877..19728
                     /gene="pdxK"
                     /locus_tag="JNZ57_001871"
                     /gene_synonym="thiJ"
     CDS             18877..19728
                     /gene="pdxK"
                     /locus_tag="JNZ57_001871"
                     /gene_synonym="thiJ"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine/pyridoxal/pyridoxamine kinase"
                     /protein_id="HAY8828106.1"
                     /translation="MSSLLLFNDKSRALQADIVAVQSQVVYGSVGNSIAVPAIKQNGL
                     NVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQEHDALRQLRAVTTGYMGTASQ
                     IKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNI
                     FELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVITSASGNEENQEMQVVVVSADSVNV
                     ISHSRVKTDLKGTGDLFCAQLISGLLKGKALNDAVHRAGLRVLEVMRYTQQHESDELI
                     LPPLAEA"
BASE COUNT         4549 a         5001 c         5577 g         4615 t
ORIGIN      
        1 aaacggcccc cgcgctgtca gaagcaaagt gcaccaccac cacctgtgcg gcaccggtga
       61 cctcggaaag ctgcgcgttg gatttaggtt ctgcggaagc aaaagcgtgg attggtgttg
      121 aaaacccgca tcgcgcagac gtattaacag aactgcgtcg cagcaccgtg gcccgcgttt
      181 gtaccggtcg tgccggtccg cgtccgcgta cccaggcgtt gctgcgtttc ctggccgatc
      241 actctcgttc gaaagatacc gtactgaaag aagtgccgga agagtgggtg aaagcgcagg
      301 gcttgctgga agtacgctcc gaaattagcg acaaaaatct ctacctgact cgcccggata
      361 tgggccgcgc ctgtgtgcag aagctgttga agcgctgaaa gcacagtgtg ttgctaatcc
      421 ggacgtacag gtcgttattt ctgatggcct gtcaactgat gccatcaccg tgaactacga
      481 agagatcctg ccgccgctga tggcgggcct gaaacaggcc gggctgaaag tcggcacgcc
      541 attctttgtt cgttatggtc gcgtgaagat tgaagatcag atcggtgaga tcctcggcgc
      601 gaaagtggtg atcctgctgg tgggggaacg tccggggttg ggtcagtcag aaagcctctc
      661 ctgttacgcc gtttactcgc cgcgtatggc gaccaccgtt gaggccgatc gcacctgcat
      721 ctctaacatt caccagggcg gcacgccgcc ggttgaagcc gcagccgtca ttgtggattt
      781 ggcgaaacgt atgctggagc agaaagcatc cggcatcaac atgacccgat aaggaggcat
      841 catgccagct ttagatttga ttcgaccgtc ggtaaccgcc atgcgggtga ttgcctccgt
      901 taacgctgaa tttgcgcgtg aactaaaatt gccgccgcat attcgtagcc tcgggctgat
      961 ttctgctgat tccgatgacg tcacctacat tgcggctgac gaagcgacca agcaggcgat
     1021 ggtcgaagtg gtatatggcc gctcgctgta tgcgggagca gcacacggac cgtcaccgac
     1081 tgccggtgaa gtgctgatta tgcttggtgg gccaaacccg gcggaagtgc gtgctggtct
     1141 ggatgcgatg gttgcgcata ttgaaaatgg cgctgctttc cagtgggcta atgacgcaga
     1201 aaacaccgca ttcctggcac atgtagtttc gcgtaccggt tcttatctct catcaaccgc
     1261 cgggatcacg cttggcgatc cgatggcgta tctggtggca ccgccgctgg aagcgaccta
     1321 cggcattgat gcagcgttga aatctgccga cgtacagctg gtgacctatg tcccgccacc
     1381 gtctgaaacc aactactcgg cagcattttt aaccggtagc caggccgcgt gtaaagcagc
     1441 ctgtaacgcc tttaccgatg cagtgctgga aatcgcgcgt aatccaatcc agcgtgcgta
     1501 acggaggttg ccgatgatca atgcactggg attgctggaa gtggacggca tggtcgccgc
     1561 gatagatgca gcggatgcca tgctcaaagc agctaacgtt cgtctgctca gtcacgaagt
     1621 gcttgaccct ggtcgcttaa cgctggtggt ggaaggcgat ctggcggcgt gtcgtgcggc
     1681 gctggacgca ggttgtgctg ccgcgatgcg taccgggcgt gtcatcagcc gcaaggagat
     1741 cggtcggcca gacgatgaca cccagtggct ggttactggc tttaaccgcc agccgaagca
     1801 acccgtaagg gaacccgacg cgccagttat cgtcgcggaa tctgctgacg agttgttggc
     1861 gctgttaaca tcagtacgtc agggaatgac ggcaggagaa gtggctgccc actttggctg
     1921 gccgctggaa aaagccagaa atgcgctcga acagctcttt tctgccggga cgttacgtaa
     1981 acgcagtagt cgttatcgtc tcaagcccca ttaacctgtc ggaggtgccg ggtgtcctac
     2041 aacacccggc attaacatca tgaaaaagac ccgtacagcc aatttgcacc atctttatca
     2101 tgaaccctta cccgaaaacc tgaagctcac gccgaaggtc gaagtggata atgttcatca
     2161 acgacagaca acggatgtct atgaacatgc tttaacgatt accgcctggc agcagattta
     2221 cgatcagctg catccgggca agtttcatgg tgaatttacg gaaattctac tcgatgatat
     2281 tcaggttttt cgtgaataca ccggtctggc gctgcgtcag tcgtgcctgg tctggccgaa
     2341 ctcgttctgg tttggcattc cggcgacgcg cggtgagcag ggatttatcg gttcgcaatg
     2401 tctgggaagc gcggaaatcg ccacccgccc tggtggcact gaatttgaac tgagcacgcc
     2461 ggatgattac acgatcctgg gcgtggtgct ttctgaagat gtcatcaccc ggcaggctaa
     2521 ctttttgcat aacccggatc gggtattaca tatgctgcgt agccagtcgg cgctggaagt
     2581 gaaagagcag cataaagccg cgctgtgggg ctttgtccaa caggcgctgg cgacgttttg
     2641 cgagaacccg gaaaatctcc atcagcctgc agtgcgaaaa gtgctggggg ataatttgct
     2701 aatggcgatg ggggcgatgc tggaagacgc gcaaccaatg gtgacggcgg aaagcatcag
     2761 tcatcagagt taccgtagat tactttcccg cgcccgtgaa tatgtgctgg aaaatatgtc
     2821 tgagccggtg acggtgctgg acttgtgtaa tcaactgcat gtcagtcgcc gcacgctaca
     2881 aaacgcgttt cacgctattt taggcattgg cccaaacgcg tggctgaaac gcattcgcct
     2941 gaacgccgta cgccgcgaac tgataagccc gtggtcgcaa agcacaacgg taaaagacgc
     3001 cgccatgcag tggggattct ggcatctggg gcaatttgtc acggattacc agcagctgtt
     3061 tgccgagaag ccgtcgttga cgttgcatca gcggatgcgg gaatgggggt gagggagtta
     3121 cacccaatcc ctgaccttaa taaactcact taacgccgct tctgggctgc catcttttgg
     3181 ctgataatca tactcccagc gtaccagtgg cggcattgac atcaggatcg actcggtgcg
     3241 cccgccagtt tgcaggccaa acagagtgcc gcgatcccag accagattga actcgacata
     3301 acgaccgcga cggtagagct gaaaattgcg ctcgcgctcg ccgtaggcca tcgctttacg
     3361 tcgctctaca attggtaaat aagcgtcggt gtagcctttg cctaccgcct gcataaaggc
     3421 aaaacagtgg tcgaaatctg gcgtgttcag atcatcaaag aacagcccgc caataccgcg
     3481 ctgttcgttg cgatgtttga ggtagaagta atcgtcgcac cactttttgt aacggggata
     3541 aacgtcttca ccaaatggca ggcacaggtc acgggcggtg cggtgccagt gaatggcgtc
     3601 ttcttcaaaa ccatagaaag gggttaaatc gaagccgccg ccaaaccacc agacgggctc
     3661 tgcacccggt ttttcggcaa taaaaaaacg cacattcgcg tggctggtgg gaacatacgg
     3721 gttatgcgga tgcactacca gtgaaacgcc catcgcctcg aaactgcgcc cggcaagttc
     3781 cgggcgatga gcggtggcgg aagcaggcat cgcctcgccg tggacgtgag aaaagttgac
     3841 gcctgcctgt tcgaaaacac caccattacg caacacccga ctacgcccgc cgccgccagc
     3901 ttcgcgctgc caactatctt cgacaaattt tgcgccatcg acggcggtca gctgctgaca
     3961 aatcgtatcc tgaaggttga gcagaaactg tttaacctgg tgtgcgtcgg gtttcataac
     4021 ttatcgcttt ttcgaatgtg ctttctggtt gtcgaaccag tggaaataac tgatcacgcc
     4081 ttcagcaatc gctgtggcga ttttctgacg aaacgccgcc gtgcctaaca gccgctcttc
     4141 ttccgggttg gtgataaacg aggtttccac cagcaccgaa ggaaccgacg gcgatttcaa
     4201 caccacaaac gcggcttgtt cggtgttgcg gctgtgcagt ttatgcaccg gcttaatctt
     4261 tttcagaata tgcgagccaa gcgtcaggct gtttttaata gtatcggttt gcaccagatc
     4321 aaacagcact tgctgcaata ggtgatcctt gtcagtcgcc tttttaccgg caacttcatc
     4381 ggcgcggttt tcgcgttcag acaggtattt cgccattgcg ctacttgccc cacggttaga
     4441 gagggcaaat accgaagcac cggcagcttt cgggttggta aagccatcgg catgaattga
     4501 cataaacaga tctgcgccat gtttatgggc gatttcaacg cgatcgtaaa gtgggataaa
     4561 cgtatcgcca gaacgcgtta aacgcgcatc aatcccatga ttacgcaaaa tggaacggac
     4621 gtttttagca atcgccagca ccacatgttt ttctttcgaa ccgttgcgtc cgatcgctcc
     4681 ggtatcaatt ccgccgtggc ctggatcgag aacaacgaca cgtttgccgc cagatttttt
     4741 ggctttcggc ttgctgtgtc cgttgctggt ttttaaaggt tcgtctttgg cgatggcttg
     4801 cgacattcct gacaacgtca gggcagccaa accggctttc agcacctggc ggcgcgaagt
     4861 gagtgttttt agtggtttaa aagtgctcat acggcctgag ttgtaataat aaagttccag
     4921 atgttatatc gtatcgcgta atccgttacg acggtttgat gttgagaatt gttttacttt
     4981 tcatttcaat agttgacaac tccccattat gccacttttt caaccgattt tcgtcagata
     5041 ttggctaatt ctaccgttca cgccataatc agtcttttaa cccgcaaaaa ggtaacgaat
     5101 accatggaga tacgcgtatt tcgccaggaa gatttcgaag aggttatcac cctttgggag
     5161 cgttgcgact tgctgcgtcc gtggaacgat ccggaaatgg acatcgagcg taagatgaac
     5221 catgacgtca gtttgttttt ggtcgctgag gtgaacggtg aagtggtcgg aacggtgatg
     5281 ggcggttatg acgggcatcg cgggtctgct tattatcttg gcgtgcatcc agagtttcgt
     5341 gggcgtggga ttgccaatgc gttgcttaat cggctggaga aaaagctgat tgctcgtggc
     5401 tgcccgaaaa ttcagatcaa tgtgccggaa gataacgaca tggtgctcgg aatgtatgaa
     5461 cgcctgggat atgaacacgc cgacatgctg agtctgggta agcgtttgat tgaagatgaa
     5521 gagtactgag ttccatcctg tccattatga tgcgcacgga cgcctgcgtt tacccttgct
     5581 cttctggctt gtgctattgc ttcaggcgcg aacctgggtg ctgtttatca ttgccggtgc
     5641 gtcgcgcgag cagggtactg cgctgctaaa tctgttttat cccgatcacg ataatttctg
     5701 gctggggttg attcccggta ttccggcggt gctggcgttt ttgttgagcg gtcggcgggc
     5761 ttcgtttcct cgcacctggc atgtgctcta ttttctgttg ctgttggcgc aggtggtttt
     5821 actttgctgg caaccgtggc tgtggctgaa cggtgaatcc gttagcggta tcggtctggc
     5881 gctggtagtg gcggatattg tggagttaat ctggctgctg accaatcgac gtttacgcgc
     5941 ttgttttaat gaagaaaaag aataacgcag aggtgcgctt tgtttatgcc ggatgcggcg
     6001 tgaacgcctt atccggccta caaaacatcg aaaattcaat atattgcagg agaaagtagg
     6061 cctgataagc gtagcgcatc aggcaatttt gtgtttgtca tcaaccttta acggcacttt
     6121 ttggtgaatt tgcactccaa gcaacgttat tgaataacca aaggaagtga catgaaatcg
     6181 ctgcgtttaa tgttatgcgc tatgccgttg atgctgaccg gctgttccac gatgtcgtca
     6241 gttaactggt cggccgctaa cccgtggaac tggtttggat cgtccaccaa agtgagcgag
     6301 cagggcgtgg gtgaattaac ggcgtccaca ccactgcaag aacaagccat tgctgatgcg
     6361 cttgatggcg attatcgcct gcgcagcgga atgaaaaccg cgaacggcaa cgtggtgcgc
     6421 ttttttgaag tgatgaaagg cgacaacgtg gcgatggtga ttaacggcga tcaaggcacg
     6481 atcagtcgca ttgacgtgct ggatagcgat attcctgctg acaccggtgt taaaatcggt
     6541 acaccgttta gcgaccttta cagcaaagca tttggcaatt gccaaaaagc tgatggtgat
     6601 gataatcgtg ccgtcgaatg taaagccgaa ggcagtcaac atattagcta ccagttcagt
     6661 ggggaatggc gtggtcctga agggttaatg ccttcggacg ataccctgaa aaactggaaa
     6721 gtcagtaaaa ttatctggcg gcgttaattt gcgtctgaac aaaccgccgc cgcgaaaaaa
     6781 cacgtaaaat agcgctcaac aatgccacgg attgcgtggc attcttattt tcaggaggaa
     6841 caatgtctca ggttcagagt ggcattttgc cagaacattg ccgcgcggcg atttggatcg
     6901 aagccaacgt gaaaggggaa gttgacgccc tgcgtgcggc cagtaaaaca tttgccgaca
     6961 aactggcaac ttttgaagcg aaattcccgg acgcgcatct tggtgcggtg gttgcctttg
     7021 gtaacaacac ctggcgcgct ctgagcggcg gcgttggggc agaagagctg aaagattttc
     7081 cgggctacgg taaaggcctt gcgccgacga cccagttcga tgtgttgatc cacattcttt
     7141 ctctgcgtca cgacgtaaac ttctctgtcg ctcaggcggc gatggaagcc tttggtgact
     7201 gcattgaagt gaaagaagag atccacggct tccgttgggt ggaagagcgt gacctgagcg
     7261 gctttgttga cggtacagaa aacccggcgg gtgaagagac gcgccgcgaa gtggcggtta
     7321 tcaaagacgg cgtggatgcc ggcggcagct atgtgtttgt gcagcgttgg gagcacaacc
     7381 tgaagcagct caaccggatg agcgttcacg atcaggagat gatgatcggg cgcaccaaag
     7441 aggccaacga agagattgac ggcgacgaac gtccggaaac ctctcacctc acccgcgttg
     7501 atctgaaaga agatggcaaa gggctgaaga ttgttcgcca gagcctgccg tacggcaccg
     7561 ccagtggcac tcacggtctg tacttctgcg cctactgcgc gcgtctgcat aacattgagc
     7621 agcaactgct gagcatgttt ggcgataccg atggtaagcg tgatgcgatg ttgtgtttca
     7681 ccaaaccggt aaccggcggc tattacttcg cgccgtcgct ggacaagctg atggcgctgt
     7741 aagcgtttct gattctatga ttaaaggcca gccagtaaca aaactgactg gcctttttat
     7801 tacttttgct tcaacgccgc atacacctga tcaactaccc aaccataagt tgcaatcggt
     7861 aactgaccgc tttcgaacat attgggattt ttttgtggat cggcaactgg cgaatggggc
     7921 ttgttgctta acatcacaat cgccatatga ttgaccggat cgataacggt tactgtcccg
     7981 gtccagccag tgtgaccgta ggtttgcggg cttgccagcg tgccaaacgt cggcgtcatg
     8041 gtggcattac cattcacgcg ccagccgagg ccaaaagtgg catcttcctt agagctggtg
     8101 gtgaacatct tcaccgtttc cgcactgaac agctgcacat cgccatagcc cccgccgttc
     8161 agcatcgttt gcattaacac cgcaatatcg ccggtattgg aaaacaaacc tgcgtgcccg
     8221 gaaacgccgc ccatcgaata aaaggctttt tcatcgtgca cctgacccca gagagtggag
     8281 gtgcggatat tcgggaaatg gatcacgcca tcgcgggtat tgccgttcaa ttccgtggcg
     8341 gcaatttgtt gcggtttaaa gcctttcagc agcgggttaa ataccgtatg tgtcaggccg
     8401 agcgggcgat aaatcgactc ttcaacatag cggtcaagcg gctgaccggt aaccgactcg
     8461 acgataaatc caagcagcat ataatcgaca tcgctgtaga tatgtttgct gccgggctga
     8521 tattccagcg gcgtgcgctt gatcatctcc agcgtctggc ctttatccta ggaatataac
     8581 gcgcccgcga ccgctttatt cgggtattgc ggatctgccg ggaaaccgcc gctgtgatgc
     8641 agcaggtcag aaatccgcag ggtgtttttg cctttaatgg tgtcatttgg actatcggca
     8701 aaccccggaa tatatttcgc aatccgatcg tcaggatgca gtttgccttc gctcatcagc
     8761 ttttgcaggg cgaagttcgt ggcgtacatt ttggtgtttg aggccaggtc atacagcgtc
     8821 ccggtggtgg ctttgacagg ctgttccatc aacacgctgc catcgtactt tttcgccgct
     8881 ccccaggctt tgcgatacac aatctgatta tctttaatga tcagcaggtt tacgccggga
     8941 taaccggcat caacttgctg gctaatccag cgatccatct ggttaagccg tttgacgtta
     9001 aaccctgctt tctctggcga gctttctgtc agaacagggt attttgcggc gctgacgcta
     9061 caactaacag ccagcagaga aagatagagc attgtccgtt tcatgatatc agtccagatt
     9121 gacgttacgg cagccaaaga gcgtggtgaa aataaacccg caaacccatg ccaccagaat
     9181 cccgccagca taaaccgcca tggccggaag gatgccttgt gcggaagtca tcagcggcag
     9241 cgctaccaga ccagacggcc caaaggcgct gtttaagccc atcggcagac cccaccaggc
     9301 tatcaggccg ataaacaaac cgcccgccgt accgcctaaa caggcggtga caaacggctt
     9361 catgcggggc agggtgacac cgtaaatcag cggttcacca acgcccagca ggccgggaat
     9421 aatcgccccg cgtacctgac tgcgtagcgc actgtgcggt tgcgaccgcc agtagagtgc
     9481 cagcgccgcg cccacctggc ccgcgcctgc cattgaaagg atgggaaata agctgttgaa
     9541 tccctggctg tccattaacg cgaggtaaac aggaataaag ccctgatgca cgccaaatac
     9601 cacggcgatc aggaacagcc cggctaaaac cgcacaaccg aacggattac tgttcaggtg
     9661 cataaacagc catgacatac cttcgaataa ccagccaccc agcggcataa tgatcaggta
     9721 cgcaagcgta gcggtgatca gcagggtgat taacgaggtc agcagcatgt cgagatcgtc
     9781 cggcataaag cggcgcacca tgccttcaat gcgggcgcag gcccacgcgg caatcagcac
     9841 gccgataata ttgccgcgcg gatcgatggg cagaccaaag aaatcgtgaa aaccggcgta
     9901 gtaaccggtg gttgcagcgg ggttataacc gagcaaaaag agtgcggcaa taattgcgcc
     9961 attgacgccc gtgccgccaa atgcctgggc ggcgttatag cccaccagaa tcaccaggaa
    10021 ggtgaacaaa cctttgctga acaccttcat aaaattcagc gcgtcgggta gcgtgccctg
    10081 agcatctgcc ggaacgtgca tcaccgtggc aattaacgtc gctatcccca gcagcagacc
    10141 ggcggcaata aaaccgggga tcagcggcgt gaagatggtg gcgaatttgg cgagaaattg
    10201 ttgcacgccg gaggtttgtt tggcttttaa ctgacgtttg ttctgggcgg cgatttctgc
    10261 ggcatcctgt accggtgcct cgcccagcag ctcgctcatc gcttttgcgg cacgatgcgc
    10321 tttaccaggt ccaaaaacga cctgcacctg gtcgctggtc aaaatgacgc tcttcacgcc
    10381 ttccagcgtt ttgatattgg gatcaaccag tgaactgtca tgtacaccca gacgcaggcg
    10441 cgtcatacag ttaccacaac tggcgatatt tcccggtccg ccgacacggg taagaatggt
    10501 gttcagaagt tcactgctga tctctttggc catgggttat tccttgtcta aaacctgacg
    10561 aataaagccg ccgtgttgat ccaggcgttt tttagcttct gcggcatcga gatttttcag
    10621 caccatcaca atggccgttt tacagttgcg ctcgcaggca attaacgccg cttccgcttg
    10681 ttcggcatta catccggtgg cgtttttaac gatattgacc tggcgcacat gcagtttttc
    10741 gttggtggcg accacatcga ccataaggtt gccgaacact ttgccggatt taatcatcag
    10801 cccggtggaa agcatattga gcaccagttt ctgcgctgta cctgctttca tccgcgaaga
    10861 accggtaaca acttcggcac ctacaatcgg tgtaatggca aactcagcgg tggttgaaac
    10921 ggcgctcccc ggattacagg aaattcccac tgtgcggcag ccgagctggc gtgcgtattc
    10981 cagtccggca atcacatacg gcgtgcgacc gctggcagca atgccaacca ccacatcctg
    11041 tgccgttaaa ttaatatttt tcagatcatt aacaccgcct tcccggctat cttccgcgcc
    11101 ttccaccgcg tgctgaatgg catattcgcc gccagcaatc aaaccaacca ccagacccgg
    11161 tttcacgccg taggtgggcg gacattcgct ggcatccaga atccccagac gaccggatgt
    11221 tcccgcaccg aggtaaatca gacgcccgcc gccgcttacc tgggcgtgga taacatcgat
    11281 cgccgcggcg atatccggca gtacgcgctc aacggcaagc ggtacggttt tatcttcatc
    11341 gttgataatc cggcacattt ccagcgttga tacgcggtca atttcagccg aggcggcgtt
    11401 cgagccttca gtaatcatct tttcaagttg catcggtggt gaccttacta tttacgatca
    11461 aataattgca gatgtatgga atcatatatc ctgaattgac agacttaaag gaatcattga
    11521 gtctacactc gcagagtgtg aagagcgtca taagaactta agcggaattt atgctgccag
    11581 cccaggagag tggaagatgt tgtacctgac gaaaataagc aatgcgggga gtgaattcac
    11641 cgaaaacgag caaaaaatcg ctgactttct gcaggccaac gtgagtgagc tgcaatccgt
    11701 ttcttcacgg cagatggcga aacagctcgg cattagccag tcgagcatag tgaaatttgc
    11761 ccaaaaactc ggcgcgcaag gatttactga attgcgtatg gcgttaatag gcgaatacag
    11821 tgccagccgg gagaaaacga ataccacggc gctgcacctg cacagttcga ttaccagtga
    11881 tgattcgctg gaagtgattg cccgcaaatt gaatcgcgaa aaagagctgg cgctggagca
    11941 aacctgtgcg ttgttcgact acgcgcggct gcaaaaaatc attgaggtca tcagtaaagc
    12001 accgtttatc cagataacgg gcctgggcgg atcggcgctg gtggggcgcg atctgtcgtt
    12061 caaactgatg aaaattggct atcgcgtggc ctgcgaagcc gacacgcacg tacaagccac
    12121 cgtttcccag gcgttgaaaa aaggcgatgt acaaatcgct atctcttaca gcggcagtaa
    12181 aaaagagatt gtcttgtgcg cagaagcggc acgaaagcag ggggcaacgg tgattgccat
    12241 tacttctctg gctgactctc cgctgcggcg gctggcgcat ttcacgctcg ataccgtttc
    12301 cggtgaaacc gaatggcgta gctcgtcgat gtctacccgc acggcgcaaa attctgttac
    12361 cgatttactg tttgttggtc ttgtgcaact caatgatgtg gcgtcattga aaatgattca
    12421 gcgcagcagt gagctaacac aacgcctgaa atgatgcata aagcagcgac tggattgaga
    12481 ttttcctgaa ttagtgagct gatccgcagc aatattttgt ttatcctgta ttttcagagg
    12541 gaatggagtg taacgctctg tattaacaag gagagcatta aaatgggtaa actcacgggc
    12601 aagacagcac tgattacggg cgcattgcag ggaattggcg aaggaattgc cagaactttt
    12661 gcacgtcatg gcgcgaacct aatcttgctg gatatctccc ctgagatcga aaagctggcg
    12721 gacgaactgt gtggtcgtgg tcatcgctgt acggcggttg tcgccgatgt gcgtgacccg
    12781 gcgtcggtag ccgcagctat caaacgcgcg aaggaaaaag aagggcgcat tgatatcctg
    12841 gtgaataacg caggcgtttg tcgtctgggc agtttcctcg atatgagcga tgacgatcgc
    12901 gatttccata ttgatatcaa tattaaaggc gtatggaacg tcacgaaggc ggtgctgccg
    12961 gagatgattg cgcgcaaaga tggtcgcatt gtgatgatgt cttcagtcac tggtgatatg
    13021 gtggccgatc ctggcgaaac ggcgtacgcc ttaacgaaag cggcgattgt tggcctgaca
    13081 aaatcgctgg cggtggagta cgcgcagtct ggtattcgcg ttaacgccat ttgcccggga
    13141 tacgtgcgca caccaatggc ggaaagcatt gcccgccagt cgaacccgga agatccagag
    13201 tcggtgctga ctgaaatggc gaaagcaatc ccgatgcgtc gcctcgccga tccgctggaa
    13261 gtcggcgaac tggcggcctt cctcgcatcg gatgaatcca gctatttaac tggtacacag
    13321 aatgtgattg atggcggcag cacactgccg gagacggtta gcgtcggtat ctgattcacc
    13381 tctgtttcct ccctgcatgt gtggggagga tttcgtcttg aaccaagttc ttattccctt
    13441 tttaacttcc aaatcaccaa acggtatata aaaccgttac tcctttcacg tccgttataa
    13501 atatgatggc tattagaaag tcattaaatt tataagggtg cgcaatggcc gttaacttac
    13561 tgaaaaagaa ctcactcgcg ctggtcgctt ctctgctgct ggcgggccat gtacaggcaa
    13621 cggaactgct gaacagttct tatgacgtct cccgcgagct gtttgccgcc ctgaatccgc
    13681 cgtttgaaca gcaatgggca aaagataacg gcggcgacaa actgacgata aaacaatctc
    13741 atgccgggtc atcaaaacag gtgctggcaa ttttgcaggg cttaaaaacc gacgttgtca
    13801 cttataacca ggtgaccgac gtacaaattc tgcacgacaa aggcaagctg atcccggctg
    13861 actggcagtc gcgcctgccg aataatagct cgccgttcta ctccaccatg ggcttcctgg
    13921 tgcgtaaggg caacccgaag aatatccacg actggaacga cctggtgcgc tccgacgtga
    13981 agctgatttt cccgaacccg aaaacgtcgg gtaacgcgcg ttatacctat ctggcggcat
    14041 ggggcgcagc ggataaagct gacggtggcg acaaagccaa aaccgaacag tttatgaccc
    14101 agttcctgaa aaacgttgaa gtgttcgata ctggcggtcg tggcgcgacc accacttttg
    14161 ccgagcgcgg cctgggcgat gtactgatca gcttcgagtc ggaagtgaac aacatccgta
    14221 aacagtatga agcgcaaggc tttgaagtgg tgattccgaa aaccaacatt ctggcggaat
    14281 tcccggtggc gtgggtcgat aaaaacgtgc aggccaacgg tacggaaaaa gcagcaaaag
    14341 cctacctgaa ctggctctac agcccgcagg cgcagaccat catcaccgac tattactacc
    14401 gcgtaaataa cccggaagtc atggacaaac tgaaagataa attcccgcag accgagctgt
    14461 tccgcgtgga agacaaattt ggctcctggc cggaagtgat gaaaacccac ttcaccagcg
    14521 gcggcgagtt agacaagctg ttagcggcgg ggcgtaactg atgtttgcag tttcatcaag
    14581 acgcgtgctg ccgggcttta ccttaagcct cggcaccagt ctgctgtttg tgtgcctgat
    14641 tttgctgctg ccgctctccg cgctggtgat gcagctggct cagatgagct gggcgcagta
    14701 ctgggaggtg atcaccaacc cacaagtggt cgcggcctac aaagtgacgc tgctgtcggc
    14761 gtttgtggca tcgattttta acggcgtttt cggtctgctg atggcgtgga ttttaacacg
    14821 ttatcgcttt ccgggccgca cgctgcttga tgcgctgatg gatttaccct ttgcgctgcc
    14881 aacggcagtc gccggtttaa cgctggcctc gctcttttcc gtaaacggtt tttacggtga
    14941 atggctggcg aagtttgata tcaaagtcac ctatacctgg cttggtattg cggtggcgat
    15001 ggcctttacc agcattccgt ttgtggtgcg taccgtgcag ccggtgctgg aagagttagg
    15061 cccagaatat gaagaagcgg cggaaacgct tggtgcaacg cgctggcaga gtttctgcaa
    15121 agtggtgctg ccggaacttt ctccagcgct ggtggcgggc gtggcgttgt cgtttacccg
    15181 tagtcttggt gagtttggcg cggtgatatt tatcgccggg aacatcgcct ggaagacgga
    15241 agtgacgtcg ctgatgattt ttgtgcgctt gcaggagttt gattacccgg cggcgagcgc
    15301 gattgcttcg gtgatcctcg cggcatccct gctgctgctg ttctcaatta acactctgca
    15361 aagtcgcttt ggtcggcgtg tggtaggtca ttaatggcgg aagttaccca attgaagcgt
    15421 tatgacgcgc gcccgattaa ctggggcaaa tggtttctga ttggcatcgg gatgctggta
    15481 tcggcgttca tcctgctggt gccgatgatt tatatcttcg tacaggcgtt cagcaaaggg
    15541 ctgatgccgg ttttacagaa tctggccgat ccggacatgc tgcacgccat ttggctgacg
    15601 gtgatgattg cgctgattgc cgtaccggtg aacctggtgt tcggcattct gctggcgtgg
    15661 ctggtaacgc gctttaactt ccccggacgc cagttactgc tgacgctact ggacattccg
    15721 tttgccgtat cgccggtggt tgccggtctg gtgtatctgc tgttctacgg ctctaacggt
    15781 ccgctgggcg gctggctgga tgaacataat ttgcagatta tgttctcctg gccgggaatg
    15841 gtgctggtca ccatctttgt gacctgtcct tttgtggtgc gcgagctggt gccggtgatg
    15901 ttaagccagg gcagccagga agacgaagcg gcgattttgc ttggcgcgtc tggctggcag
    15961 atgttccgtc gcgtcacatt gccgaacatt cgctgggcgc tgctgtatgg tgtggtgcta
    16021 accaacgccc gcgcgattgg cgagtttggt gcggtgtcgg tggtttccgg ctcgattcgc
    16081 ggcgaaacac tttcgctgcc gttacagatt gaattgctgg agcaggacta caacaccgtc
    16141 ggctccttta ccgccgccgc gctgttgacg ctgatggcga ttatcaccct gtttttaaag
    16201 agtatgttgc agtggcgtct ggagaatcag gaaaaacgcg cgcagcagga ggagcatcat
    16261 gagcattgag attgccaata ttaagaagtc gtttggtcgc acccaggtgc tgaacgatat
    16321 ctcactggat attccttctg gtcagatggt cgcgctgctg gggccgtccg gttccggaaa
    16381 aaccacgctg ctgcgcatta ttgccgggct ggagcatcaa accagcgggc atattcgctt
    16441 ccacggtacc gacgtgagcc gcctgcacgc acgcgatcgt aaagtcggtt tcgtgttcca
    16501 gcattacgcg ctgttccgtc atatgacggt gttcgacaat atcgcttttg gcctgacggt
    16561 gctgccacgt cgcgagcgcc cgaattccgc agccatcaaa gcgaaagtga caaaattgct
    16621 ggagatggtc cagcttgcgc atctggcgga tcgttatccg gcacagcttt ccggcggcca
    16681 gaaacagcgc gtggcgctgg cgcgcgcgct ggctgttgaa ccgcaaattc tcctgcttga
    16741 tgaaccgttt ggcgcgctgg atgcgcaggt gcgtaaagag ctgcgtcgct ggctgcgtca
    16801 actgcatgaa gagctgaaat tcaccagcgt gttcgtgacc cacgaccagg aagaagcgac
    16861 cgaagtagct gatcgtgtag tggtgatgag cctgggcaat atcgagcagg ctgatgcgcc
    16921 ggaccaggta tggcgcgaac cagcgacccg atttgtgctc gaatttatgg gcgaagtgaa
    16981 ccgcctgcag ggaaccattc gcggcgggca gttccatgtt ggcgcacatc gctggccgct
    17041 ggggtatacg cctgcgtatc aggggccggt ggatctcttc ctgcgcccgt gggaagtgga
    17101 tatcagccgc cgtaccagtc tcgattcgcc gctgccggta caggtactgg aagccagccc
    17161 gaaaggtcac tacacccaat tagtggtgca gccgctgggg tggtacaacg aaccgctgac
    17221 ggtcgtgatg catggcgacg atgccccgca gcgtggcgag cgtttattcg ttggtctgca
    17281 acatgcgtgg ctgtataacg gcgacgagcg tatcgaaacc cgagatgagg aacttgctct
    17341 cgcacaaagc gcctgatagg ttgagtgaat gttaaacgcc cggaggcgct tcccgcgatc
    17401 cgggcttttt aatggcaagg tttgtaacct gtagacctga taagacgcgc aagcgtcgca
    17461 tcaggcaaca ccacgtatgg atagagatcg tgagtacatt agaacaaaca ataggcaata
    17521 cgcctctggt aaagttgcag cgaatggggc cgaataacgg cagtgaagtc tggttgaaac
    17581 tggaaggcaa taacccggca ggttcggtga aagatcgtgc ggcactttcg atgatcgtcg
    17641 aggcggaaaa gcgcggggaa attaaaccgg gtgatgtgtt aatcgaagcc accagtggta
    17701 acaccggcat tgcgctggca atgattgccg cgcttaaagg ctatcgcatg aaattgctga
    17761 tgcccgacaa catgagccag gaacgccgtg cggcgatgcg tgcttatggt gcggaactga
    17821 ttcttgtcac caaagagcag ggcatggaag gtgcgcgcga tctggcgctg gagatggcga
    17881 atcgtggcga aggaaagctg ctcgatcagt tcaataatcc cgataaccct tacgcccatt
    17941 acaccactac cgggccggaa atctggcagc aaaccggcgg gcgcattacc cattttgtct
    18001 ccagcatggg aacaaccggc actatcaccg gcgtttcacg ctttatgcgc gaacaatcca
    18061 aaccggtgac cattgtcggc ctgcagccgg aagaaggcag cagtattccc ggcattcgcc
    18121 gctggcctgc ggaatatctg ccggggattt tcaacgcttc tctggtggat gaggtgctgg
    18181 atattcatca gcgcgatgcg gaaaacacca tgcgcgaact ggcggtgcgg gaaggaatat
    18241 tctgtggcgt cagctcaggc ggcgcggttg ctggagcact gcgggtggca aaagctaacc
    18301 ctggtgcggt ggtggtagcg atcatctgcg atcgtggcga tcgctacctc tccaccggag
    18361 tgtttgggga agagcatttt agccaggggg cggggattta agattattgc gcaggcaccg
    18421 ttttatccgt ctgcgcaatt agcgcatgta aaaaaggctg tgcgttctca tcgctcttac
    18481 cggggatctt cacaatatac ggcttcccgg taatcgatga cgacgaagca accttatcaa
    18541 taaactgctc ggcagtgtca atgcggttac gggtattgcc gagcttcaga cgcagatgag
    18601 aaaccgcttc atcgcaggta tgttcatcac cgttgcgcac aaatatcaaa tcctttttct
    18661 gtgataatcc ctccagcatg gcgttgatgc gggcttcttc atgggcagtt aacttcgcgt
    18721 aagcggggag tgtcattagt agtgtaatga ccagacaaat gattttcttc attgaattac
    18781 cttatccttg ttttgtaata gccgatttga ctgccagaat caggtaaagt ttcggttgga
    18841 atacgatgag gatcatcggc aaggagaaaa aattaaatga gtagtttgtt gttgtttaac
    18901 gataagagca gggcgctgca ggcggatatc gtcgccgtgc agtcgcaggt ggtttacggc
    18961 agcgtgggca acagcattgc cgtgcctgct atcaaacaga acggtctgaa tgtttttgcc
    19021 gtgccgacgg tattgctgag caatacgccg cattatgaca ctttctacgg tggtgcgatt
    19081 ccggatgaat ggtttagcgg ttatttgcgt gcgcttcagg agcatgatgc gctgcgccag
    19141 ctgcgcgctg taaccacggg ctatatggga acggcatcgc aaatcaaaat ccttgccgag
    19201 tggctgactg cgctacgcaa agaccatcct gacctattga tcatggtcga tccggtgatt
    19261 ggcgatattg atagcggaat ttatgtcaaa cctgaccttc ccgaggcgta tcgacaatat
    19321 ttactgccgc tggcgcaggg aattaccccc aatatctttg agctggaaat cctgaccggt
    19381 aaaaattgcc gcgatctcga cagtgccatt gctgccgcaa aaagtctgct ttcagacaca
    19441 ttaaaatggg tggtgattac cagcgcctcc ggtaatgaag aaaatcagga gatgcaggtg
    19501 gtggtggtca gtgccgacag cgtgaatgtc atttcccatt cacgggtaaa aaccgacctg
    19561 aaagggactg gcgacctgtt ttgtgctcag cttatcagtg gtttgctgaa agggaaggcg
    19621 ttaaacgatg cggtgcaccg tgcggggttg cgcgtactgg aagtgatgcg ctacacccag
    19681 cagcatgaga gcgatgaatt gattttgccg ccgctggcgg aagcataaaa aatggcgccg
    19741 at
//
LOCUS       DADMHC010000063        18799 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.063, whole genome shotgun sequence.
ACCESSION   DADMHC010000063 DADMHC010000000
VERSION     DADMHC010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 18799)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18799)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18799
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.063"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(32..2479)
                     /gene="glgP"
                     /locus_tag="JNZ57_001872"
     CDS             complement(32..2479)
                     /gene="glgP"
                     /locus_tag="JNZ57_001872"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen phosphorylase"
                     /protein_id="HAY8828107.1"
                     /translation="MNAPFTYSSPTLSVEALKHSIAYKLMFTIGKDPVVANKHEWLNA
                     TLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNAMLSLGIYEDVQGAL
                     EAMGLNLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI
                     VNGSQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQEGKKTRWIETEEILGVAYDQ
                     IIPGYDTDATNTLRLWSAQASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTY
                     SGRELRLRQEYFLVSSTIQDILSRHYQLHKTYDNLADKIAIHLNDTHPVLSIPEMMRL
                     LIDEHQFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYF
                     LKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLF
                     ADFAKIFPGRFTNVTNGVTPRRWLAVANPSLTAVLDEHLGRNWRTDLSLLNELQQHCD
                     FPMVNHAVHQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVI
                     TRYNRIKADPDAKWVPRVNIFGGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKV
                     VFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEML
                     DHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEDPGRY
                     RDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYELQEEWTAKAMLNIANMGYFSSDR
                     TIKEYADHIWHIDPVRL"
     gene            complement(2498..3931)
                     /gene="glgA"
                     /locus_tag="JNZ57_001873"
     CDS             complement(2498..3931)
                     /gene="glgA"
                     /locus_tag="JNZ57_001873"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HAY8828108.1"
                     /translation="MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF
                     PDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFA
                     YTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTV
                     HNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYTRE
                     ITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAEN
                     KRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVL
                     QEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTL
                     PLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRF
                     VQRQAMAMDFSWQVAAKSYRELYYRLK"
     gene            complement(3931..5226)
                     /gene="glgC"
                     /locus_tag="JNZ57_001874"
     CDS             complement(3931..5226)
                     /gene="glgC"
                     /locus_tag="JNZ57_001874"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HAY8828109.1"
                     /translation="MVSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPA
                     VHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGWSFFNEEMNEFVDLL
                     PAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKG
                     ARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPPSMPNDPSKSLASMGIYVF
                     DADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRD
                     VGTLKAYWKANLDLASVVPELDMYDRNWPIRTYNESLPPAKFVQDRSGSHGMTLNSLV
                     SGGCVISGSVVVQSVLFSRVRVNSFCNIDSAVLLPEVWVGRSCRLRRCVIDRACVIPE
                     GMVIGENAEEDARRFYRSEEGIVLVTREMLRKLGHKQER"
     gene            complement(5244..7217)
                     /gene="glgX"
                     /locus_tag="JNZ57_001875"
     CDS             complement(5244..7217)
                     /gene="glgX"
                     /locus_tag="JNZ57_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HAY8828110.1"
                     /translation="MTQLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANGQE
                     HRYDLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPADGHRFNPAKLLIDPCARQIDG
                     EFKDNPLLHAGHNEPDYRDNAAIAPKCVVVVDHYDWEDDAPPRTPWGSTIIYEAHVKG
                     LTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNY
                     WGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPL
                     FSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFR
                     FDLAAVMGRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFPPLFAEW
                     NDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDC
                     VCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQG
                     TPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASSGLTAFTAALIHLRKRIPALVE
                     NRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLIAINATLEVTEIVLPA
                     GEWHAIPPFAGEDNPVITAVWQGPAHGLCVFQR"
     gene            complement(7214..9400)
                     /gene="glgB"
                     /locus_tag="JNZ57_001876"
     CDS             complement(7214..9400)
                     /gene="glgB"
                     /locus_tag="JNZ57_001876"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching enzyme"
                     /protein_id="HAY8828111.1"
                     /translation="MSDRIDRDVINALIAGHFADPFSVLGMHKTTAGLEVRALLPDAT
                     DVWVIEPKTGRKLAKLECLDSRGFFSGVIPRRKNFFRYQLAVVWHGQQNLIDDPYRFG
                     PLIQEMDAWLLSEGTHLRPYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWD
                     GRRHPMRLRKESGIWELFIPGAHNGQLYKYEMIDANGNLRLKSDPYAFEAQMRPETAS
                     LICGLPEKVVQTEERKKANQFDASISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYA
                     KWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVIL
                     DWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALY
                     WIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQV
                     SGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLT
                     FGILYNYTENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLL
                     FMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFDPY
                     GFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWREILNTD
                     SMHYHGSNAGNGGTVHSDEIASHGRQHSLSLTLPPLATIWLVREAE"
     gene            complement(9673..10776)
                     /gene="asd"
                     /locus_tag="JNZ57_001877"
     CDS             complement(9673..10776)
                     /gene="asd"
                     /locus_tag="JNZ57_001877"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HAY8828112.1"
                     /translation="MKNVGFIGWRGMVGSVLMQRMVEERDFNAIRPVFFSTSQLGQAA
                     PSFGGTTGTLQDAFDLEALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLR
                     MKDDAIIILDPVNQDVITDGLNNGIRTFVGGNCTVSLMLMSLGGLFANDLVDWVSVAT
                     YQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGELPVDNF
                     GVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQ
                     AFTIKLKKDVSIPTVEELLAAHNPWAKVVPNDREITMRELTPAAVTGTLTTPVGRLRK
                     LNMGPEFLSAFTVGDQLLWGAAEPLRRMLRQLA"
     gene            10968..11561
                     /gene="yhgN"
                     /locus_tag="JNZ57_001878"
     CDS             10968..11561
                     /gene="yhgN"
                     /locus_tag="JNZ57_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter YhgN"
                     /protein_id="HAY8828113.1"
                     /translation="MNEIISAAVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMVREL
                     LIALLVMLVFLFAGEKILAFLSLRAETVSISGGIILFLIAIKMIFPSASGNSSGLPAG
                     EEPFIVPLAIPLVAGPTILATLMLLSHQYPNQMGHLVIALLLAWGGTFVILLQSSLFL
                     RLLGEKGVNALERLMGLILVMMATQMFLDGIRMWMKG"
     gene            complement(11618..12958)
                     /gene="gntU"
                     /locus_tag="JNZ57_001879"
     CDS             complement(11618..12958)
                     /gene="gntU"
                     /locus_tag="JNZ57_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate transporter"
                     /protein_id="HAY8828114.1"
                     /translation="MTTLTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSG
                     MPLDKIAATMEKGMGGTLGFLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSREH
                     YAIGLAGLVCALPLFFEVAIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVP
                     GPAPMLLASQMNADFGWMILIGLCAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHL
                     GEGKMPSFGFSLSLILLPLVLVGLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLV
                     AIYGLAMRQGMPKDKVMEICGHALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALT
                     GMGLPIAITCFVLAAAVRIIQGSATVACLTAVGLVMPVIEQLNYSGAQMAALSICIAG
                     GSIVVSHVNDAGFWLFGKFTGATEAETLKTWTMMETILGTVGAIVGMIAFQLLS"
     gene            complement(12962..13489)
                     /gene="gntK"
                     /locus_tag="JNZ57_001880"
     CDS             complement(12962..13489)
                     /gene="gntK"
                     /locus_tag="JNZ57_001880"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417894.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HAY8828115.1"
                     /translation="MSTTNHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHP
                     RCNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTNKVSLIVCSALKKHYRDLLREGN
                     PNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPL
                     EGVVASTIEVIKKGK"
     gene            complement(13628..14623)
                     /gene="gntR"
                     /locus_tag="JNZ57_001881"
     CDS             complement(13628..14623)
                     /gene="gntR"
                     /locus_tag="JNZ57_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001693277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate operon transcriptional repressor GntR"
                     /protein_id="HAY8828116.1"
                     /translation="MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAAL
                     DELGYIPNRAPDILSNATSRAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYG
                     YKPEMEQERLESMLSWNIDGLILTERTHTPRTLKMIEVAGIPVVELMDSQSPCLDIAV
                     GFDNFEAARQMTTAIIARGHCHIAYLGARLDERTIIKQKGYEQAMLDAGLVSYSVMVE
                     QSSSYSSGIELIRQARREYPQLDGVFCTNDDLAVGAAFECQRLGLKVPDDMAIAGFHG
                     HDIGQVMEPRLASVLTPRERMGSIGAERLLARIRGESVTPKMLDLGFTLSPGGSI"
     gene            complement(14847..15542)
                     /locus_tag="JNZ57_001882"
     CDS             complement(14847..15542)
                     /locus_tag="JNZ57_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HAY8828117.1"
                     /translation="MIYLRKANERGHANHGWLDSWHTFSFANYYDPNFMGFSALRVIN
                     DDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHS
                     EYNPSSTERLHLYQIWIMPEENGITPRYEQRRFDAVQGKQLVLSPDARDGSLKVHQDM
                     ELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTINGVKASTSDGLAIWDEQAISIHAD
                     SDSEVLLFDLPPV"
     gene            complement(15665..16591)
                     /locus_tag="JNZ57_001883"
     CDS             complement(15665..16591)
                     /locus_tag="JNZ57_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709215.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HAY8828118.1"
                     /translation="MVINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQ
                     APIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTL
                     AQAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAIESGKLGEIVEVESHFDYYRPVA
                     ETKPGLPQDGAFYGLGVHTMDQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGD
                     LKAIVKTSHLVKIDYPKFIVHGKKGSFIKYGIDQQETSLKANIMPGEPGFAADDSVGA
                     PNYVKESEVLTNLEILERGFEQASPSTVTLAN"
     gene            16923..17411
                     /gene="yhhY"
                     /locus_tag="JNZ57_001884"
     CDS             16923..17411
                     /gene="yhhY"
                     /locus_tag="JNZ57_001884"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HAY8828119.1"
                     /translation="MSEIVIRHAETRDYEAIRQIHAQPEVYCNTLQVPHPSDHMWQER
                     LADRPGIKQLVACIDGDVVGHLTIDVQQRPRRSHVADFGICVDSRWKNRGVASALMRE
                     MIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGTGKKYALRNGEYVDAYYMAR
                     VK"
     gene            17648..>18799
                     /gene="hcp"
                     /locus_tag="JNZ57_001885"
     CDS             17648..>18799
                     /gene="hcp"
                     /locus_tag="JNZ57_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
                     /protein_id="HAY8828120.1"
                     /translation="MSNIVYLTVTGEQQGSISAGCGTSESTGNRWQSGHEDEIFTFSL
                     LNNINNTGLGSQFHGITFCKLIDKSTPLFINSINNNEQLFMGFDFYRINRFGRLEKYY
                     YIQLRGAFLSAIHHQIIENQLDTETITISYEFILCQHLIANTEFSYLALPENYNRLFL
                     PNSKNQTNNRFKTLNSKAIGRLLAAGGVYNGNIEGFRDTAEKLGGDAIKGYDQILNEK
                     TAGIAIATASILLTKRSNVDTYTEINSYLGKLRGQQKLLDGIDIIEIIYIKRPSKDLA
                     NLRKEFNKTVRKNFLIKLAKTSEASGRFNAEDLLRMRKGNVPLNYNVHHKLSLDDGGT
                     NDFENLVLIENEPYHKVFTNMQSRIAKGILVGESKITPWAIPSGSIYPPM"
BASE COUNT         4799 a         4970 c         4583 g         4447 t
ORIGIN      
        1 ctctttggcc ccgttctatt tattggtgaa cttacaatct caccggatcg atatgccaga
       61 tatgatcggc gtactctttg atagtacggt cagaagagaa gtagcccata ttggcaatgt
      121 tcagcatcgc ttttgcggtc cactcttcct gaagctcgta gagttcgtcg actttatcct
      181 gacaatcgac atagctgcga taatccgcca gaacctgata gtgatcgccg aagttgatca
      241 gcgaatcaac cagatcgcga tagcgacccg gatcttccgg actgaataca ccgctgccga
      301 tttgcgtcag cacctgatgc agctcctcat ctttctcgta gtattcacgc ggtttgtagc
      361 cctgacgacg cagttcttcc acttcttccg ctgtgttacc aaaaataaag atattgtcag
      421 caccgacatg atccagcatc tcgacattcg caccgtccaa cgtaccgata gtcagcgcac
      481 cgttaagcgc aaacttcatg ttactggtgc cggaagcttc cgtccctgcc agcgaaatct
      541 gttcagacag atctgccgcc ggaatgatca actgcgccag gctaacgctg tagttcggga
      601 tgaacacgac tttcagctta tcgccaatct gcggatcgtt gttgatcact ttcgctacgt
      661 cattgatcaa atgaataatg tgcttcgcca tgtaataggc cgaagccgcc ttaccgccaa
      721 aaatattcac gcgcggtacc cacttcgcat ccgggtcggc cttgatgcgg ttatagcggg
      781 taatcacatg caacacattc atcaattgac gtttgtattc gtgaatacgt ttgatttgta
      841 catcgaacaa cgcctttgga ttcaccacca cattcagctg ctgggcgata tactctgcca
      901 gacgcttttt gttctccagc ttcgcctgat gcacagcgtg attaaccatt gggaaatcac
      961 agtgttgttg cagctcatta agcaggctaa ggtcggtgcg ccagttacgg cccaggtgtt
     1021 cgtccagcac ggctgtaagc gatgggttcg ctaccgctag ccagcgacgc ggcgtcacac
     1081 cgttggtgac gttggtgaaa cgacccggga agattttcgc aaagtcggca aacaacgatt
     1141 gcaccatcag attagagtgc agttccgata caccgttaac tttgtggctc acaacaaccg
     1201 ccagccaggc catacgcaca cgacgaccgt tggattcatc aatgatcgac gcccgtccca
     1261 gcagatcggt atcgttcgga tactgttcct gcaaggtttt caggaaatag tcgttgattt
     1321 caaagatgat ctgcaggtga cgcggcagaa ttttacccag catatcaacc ggccaggttt
     1381 ccagcgcctc gctcatcagc gtgtggttag tgtaggagaa gacctgacaa cacacctcaa
     1441 acgcgtcgtc ccagctaaat tggtgctcat cgatcagcag acgcatcatc tcaggaatcg
     1501 acagtaccgg atgggtatca ttgagatgaa tcgcgatttt atccgccagg ttatcgtagg
     1561 ttttatgcaa ctgataatgg cggcttaaaa tgtcctgaat ggtcgaggaa accagaaagt
     1621 attcctgacg caggcgcagc tcacgcccgg agtaggtgga gtcatccgga tacagtacgc
     1681 gagatacgtt ctcggagtgg tttttatctt ccactgccgc gaagtagtca ccttggttga
     1741 atttaccgag gttaatttcg ctactggctt gcgcactcca caaacgcaac gtgttggtcg
     1801 cgtcggtgtc gtaaccaggg attatctgat cgtaagcgac tcccagaatc tcttcggttt
     1861 caatccagcg cgttttttta ccttcctgct gaatgcgacc accaaaacgg actttatagc
     1921 gcgtgttgtg gcgtttgaat tcccacgggt taccgtattc cagccagtag tctggcgact
     1981 ctttctggct accgttaacg atgttctgct tgaacatacc gtagtcatag cggatgccgt
     2041 aaccgcgccc cggcaaccct aacgtcgcca gagaatcaag gaagcaagcc gccagacgtc
     2101 ccaggccacc gttaccgagg cctgggtcat tttcttcatc aatcagctct tcgagattta
     2161 accccatcgc ttccagtgcg ccctgtacat cttcgtaaat tcctagcgac aacatggcgt
     2221 tggagagcgt acggccaatc aaaaactcca tcgacaggta gtaaacctga cgagtttctt
     2281 gcgacaactg ggcacggttt gaacgtaacc agcgctccac gagacgatcg cgcacagcaa
     2341 ataacgttgc gttcagccat tcatgtttat tggcgacgac cgggtccttt ccaatcgtaa
     2401 acatcagctt gtaagcgata gagtgcttaa gagcttctac gctaagcgtg ggcgatgaat
     2461 atgtaaacgg agcattcata taggcgtttc ctgaaaacta tttcaagcga tagtaaagct
     2521 cacggtacga cttcgccgcg acctgccagc taaaatccat tgccatagcc tgacgttgca
     2581 caaaccgcca cagtgaagga cgagaccaca gtacaaaagc acgtcgaata gcccgtaaca
     2641 gcgaccaggc attactatct tcaaagacaa acccactggc gacgccatct gcaaggttct
     2701 caagagaaca gtcagaaacc gtatcagcaa gcccaccggt gcgccgcact aacggcagcg
     2761 taccgtactt caatccataa agttgcgtta agccgcacgg ttcaaaacgg ctgggcacca
     2821 gaatgacgtc cgcgccgccc ataatgcgat gcgaaaatgc ttcgtgatag ccaatctgaa
     2881 cgcccacctg gccggggtat tccgctgccg ccgcaaggaa accttcctgc agcaccggat
     2941 cgcccgcgcc gagtagcgcc agctgcccgc cctgctccag aagacccggt aaggcttcca
     3001 gcaccaggtc gagacctttc tggctggtca gacggctcac cactgcaaaa agcggcactt
     3061 tatcgtcaac cttaagcccc attgcgattt gtaactggcg cttattttcc gctttatctt
     3121 ccaacgtatc gcgggtgtaa cgcgaggcca acagtaagtc cgtctctgga ctccagattt
     3181 tctcgtccac gccgttcagt acgccggaaa gacgcccttc acggtgacgc tgttgcaaca
     3241 gaccttccat accgtaggca aactgcggtt cggtgatctc gcgagtgtag gttggactga
     3301 ccgccgtaat gtgatcggca tagtacagac cggccttcag gaaagagatt tgtccgttga
     3361 attccagccc atgaatatta aagaatgacc atggcaattg gatgtcattc atgtgatgtg
     3421 cataaaacat gccttgatag gccaagttgt gcacagtaaa caccgacttc gccggacgcc
     3481 cgcgcgccgc cagatacgca ggcgcaaggc ctgcatgcca gtcgtgcgca tgcaccacat
     3541 caggacgcca gaatgggtca agcccgctgg ccatttctgc cccaacccac cccagcagcg
     3601 caaaacgcaa tacgttgtcg gtataggcaa ataagttggt atcgtgatac gggcttcccg
     3661 gacgatcata gagatgcggc gcgtcaatca ggtatatgcc aaccccgttg taatgaccga
     3721 acaacagcgt gatatgtccg gcgaaggtat cacgacggga tactacctgc gcatcggtca
     3781 cgccacggcg aatatcggga aatgcaggca acagtacgcg agcgtcaacg ccgtctgcga
     3841 tttgtgctgc gggtaatgcc ccaataacat cagccagacc gccggtttta agcagcggga
     3901 acatctctga acatacatgt aaaacttgca ttatcgctcc tgtttatgcc ctaacttccg
     3961 tagcatttcg cgcgttacca gcacgatgcc ttcttctgaa cgatagaaac gacgtgcatc
     4021 ttcctctgcg ttttcaccaa tcaccatgcc ttccgggata acacaagcac gatcgatgac
     4081 gcagcggcgc agacggcacg agcgacctac ccatacttcc ggtaacaata cggcggaatc
     4141 aatgttgcag aatgaattca cgcgaacgcg cgagaacaga acggactgca ccaccaccga
     4201 accggagatc acacaaccgc cggataccag tgagttaagg gtcatcccgt ggctaccgga
     4261 gcgatcctgc acgaatttcg ctggcggtaa tgattcattg taggtgcgaa ttggccaatt
     4321 gcgatcgtac atatccagtt ccggcaccac agaggccaga tcgagattcg ctttccagta
     4381 agctttcagc gtacccacat cgcgccagta cggctcggca tccgggtcgg attgtacgca
     4441 agagagcggg aacgggtgcg cataggccag accggcttcg gtgatcttgg gaatcaaatc
     4501 tttgccaaag tcgtggctgg agttctcatc acgatcgtct tcttccagca gttcatacag
     4561 atagtcggcg tcaaagacgt agatacccat actcgccaga gatttgctcg gatcgttcgg
     4621 cattgacggt gggttagcag gtttttcaac gaattcgata attttatcgt tctcatcaac
     4681 cgccataacg ccaaatgcgg aggcttcttc aatcggtact ggcatacaag caacggtgca
     4741 acgtgcgcct ttttcgacgt gatcgataag catacgcgag tagtcttgct tgtagatatg
     4801 gtcgcccgcc aggatcacca cgtattccgc tttataacgg cggataatgt cgaggttttg
     4861 ggtgaccgca tctgcggtgc cgcgatacca gttttcccct ttcattctct gctgtgctgg
     4921 cagcagatcg acaaactcgt tcatttcttc attgaagaat gaccagccgc gctgaatgtg
     4981 ctgcaccaga gtgtgggact ggtactgggt gatcacgccc atacgacgga tcccggagtt
     5041 gatgcagtta gacagcgcaa agtcgataat gcggaactta ccgccgaagt gtacggccgg
     5101 ttttgctcgc ttattggtta aatccttcag gcgggtacca cgtcctcccg ccagtatcag
     5161 ggcaacagat ttcaatggca gctggcgcgc caacattaag tgatcgttct tctctaaact
     5221 aaccatgact aactcctttt ttatcatctc tggaacacac acaatccgtg tgcaggtccc
     5281 tgccagacag ccgtaatcac tgggttatcc tctccagcga atgggggaat ggcgtgccac
     5341 tccccagcag gtaaaacaat ctctgttacc tcaagcgtgg cgttaattgc gatcaaaaag
     5401 cgatccgaga gcagaatttg cagctgtttc ggcccgtttt gccactcatc cgtgcttaaa
     5461 ggttgagcat atcgatttag ccaacggaca ttgccatcgc cttcttccca ccagcgattc
     5521 tccaccaaag cgggaatgcg cttgcgcaga tggattaacg cggcggtaaa tgcggttaaa
     5581 ccactgcttg cctgcgacca gtccaaccag gttaattggt tatcctgaca gtaggcattg
     5641 ttattgccat gctggctgtg accatgttcg tcaccggcca gtaacatcgg cgtaccctgg
     5701 gagagcaaca acgttgttaa caaggcgtga atactgtcgc gccgccgttc aaccaggtca
     5761 agagaaccgc ctaacccttc tttaccatga ttgttactgt aattgttgtt ggtcccgtcg
     5821 cgattttctt ctccgtttgc ttcattgtgt ttatggttga agcaaacgca gtcgcgaagc
     5881 gtaaaaccgt catgcgcagt gacgagatta atcgcggcac tcggcagacg accattacgt
     5941 ttaaaaacat cgctggaggc agcaaaacgc ccggcaaacg cccccagagg caaatcataa
     6001 tgtagccaga aacgacgggc agcatcgcgg aaatgatcgt tccactcggc aaacagcggc
     6061 gggaaatttc ccacctgata accaccaggg gcgatatccc acggttcagc aattaacttc
     6121 acctgcgaga gcaccgggca gttctggata gcggtaaaca acggcgcatc ctgacggaac
     6181 tctggcgtac ggcccatgac tgccgccaga tcaaagcgga aaccatcgac gtgacaggtt
     6241 tctacccaat aacgcaggca ggcgctggca taatccacca ccgccggatg actcaaattg
     6301 agcgtgttgc cgcaaccggt ccagttgtga taatcgccgt cttctcttat ccaataatag
     6361 ctacggttat cgatcccacg cagtgagaat aacgggccgt cgaggtccag ttccgcacta
     6421 tggttgagca cgatatcaag aatgacttcg atacccgctt tatgcagtgc tttgattgca
     6481 tcgcgaaact catccagcgc cgtttctggc gagcaggcat acgccggatg cagcgcaaac
     6541 atcgccaccg ggttgtaacc ccagtagtta cttagcccca tgcgttgcag acgtggttca
     6601 ctggcaaact gcgccactgg cagcagttcc agcgcggtaa tgcccaattg tttcaaatag
     6661 ttgatcatca ccggatgccc gagggcttta taagtgccac ggatctcgac cggaatctcc
     6721 gggtgcaagt acgttaatcc tttgacatgg gcttcataaa tgatggtgct gccccacggc
     6781 gtgcgcggcg gggcatcatc ttcccagtca tagtgatcaa ccaccactac gcatttcggc
     6841 gcaatggcgg cgttgtcgcg atagtcaggt tcattatgac cggcgtgcag cagcgggtta
     6901 tctttaaact ccccgtcaat ttgccgcgcg caaggatcaa tcaacaactt cgccgggtta
     6961 aagcgatgcc catcggcggg ttgccagggg ccatgaacgc gataaccata acgcaaaccc
     7021 gggcgcgcat ccggcagata accgtgccaa atgtcgccac tgtgccctgg caagtcatag
     7081 cgatgttcct ggccattggc gtcaaagaca cacagttcta cccgctcggc atgagcggag
     7141 aaaagtgtga agttgacgcc ctgaccgtcg taatgcgcgc cgaggggagc gggtttgcca
     7201 atggcgagct gtgtcattct gcctcccgaa ccagccagat agtggccagc ggtggtagtg
     7261 tcaggcttag tgaatgctga cgaccgtggc tggcaatctc atcgctgtgt accgtgccgc
     7321 cattgcctgc attactgccg tgatagtgca tggaatcggt attgaggatt tcacgccatt
     7381 tgcctggctg attaatgccg aagcgataat catgacgcgg caccggcgta aagttactgg
     7441 caacgataat ttcgttaccc tctttatcgc gacgcacaaa gatcagcacc gagcgttctt
     7501 tgtcatccac caccagccat tcaaagccgt acgggtcaaa atccagttca tgcattgctt
     7561 tatggtggcg gtaggtgagg ttcagatcgc gcaccagacg ctggacaccg tggtgccagt
     7621 tatcgccacc ttccaacaga tgccagtcga ggctggcgtc atggttccac tcacggccct
     7681 gggcaaattc gttccccatg aacagcagtt tcttgcccgg gaatgcccac atccagccat
     7741 agtaggcgcg caggttagcg aatttctgcc atgcgtcgcc cggcatgcgg tcgagaatcg
     7801 attttttacc gtggaccact tcatcatgcg acaacggcag gacgaagttt tcagtgtagt
     7861 tgtagagaat cccgaaggtg agtttatcgt gatgatactg acgataaacc gggtcgagct
     7921 tcatgtagtc cagggtgtca tgcatccagc cgaggttcca cttgtaccag aagcccagac
     7981 cgcccatatc ctgcggacga gaaacgccag ggaaatcggt agactcctca gccattgtca
     8041 ccgcaccgga aacctgctca ccaagaatac ggttggtatt acgcaagaat tcaatcgctt
     8101 caagattctc gcgcccgcca aattcgttcg ggatccactc cccctcttta cggctgtagt
     8161 cgcgataaat cattgacgcc accgcatcga cgcgcagcgc atcaatacca aaacgttcaa
     8221 tccagtaaag cgcgttaccg acgaggaagt tactgacttc acggcgacca taattgtaga
     8281 tcagcgtatt ccagtcctga tgatagcctt cgcgcggatc gctgtgttca tacaagttcg
     8341 tgccatcaaa ttcggcaagc gcaaagtcat cggtcgggaa gtggcctggc acccagtcga
     8401 gaatcacgtt cagacccgct gcgtgtgcgg catcaatgaa ataacggaag tcgtcgcgag
     8461 taccaaaacg gcgggttggt gcatacaggc cggttggctg ataaccccaa ctgccatcga
     8521 agggatgctc gttaatgggc agtagttcga ggtgggtaaa gcccatccat ttagcataag
     8581 gcaccagttg atcggccagc tcgcggtagc tcaaccagaa attgttatcg gtgtggcgac
     8641 gccaggagcc caggtgaact tcataaatag agattgacgc atcaaactga ttcgcttttt
     8701 tgcgctcttc agtctgtaca accttttccg gcagcccgca aataagagac gcggtttccg
     8761 ggcgcatttg cgcttcgaag gcataagggt cggacttcag acgcaagttg ccattggcat
     8821 caatcatctc gtatttatag agctgaccgt tatgcgcccc agggataaac agttcccaaa
     8881 tgccgctctc tttacgcaga cgcatcgggt gacggcgacc gtcccagtag ttgaattgcc
     8941 caaccaccga gacccgacgg gcgtttggag cccaaacaga gaaacgcgta cctgtgacgc
     9001 catccatagt atctgcatgc gcgcctaagg tttcatacgg gcgcaggtga gtaccttcag
     9061 ataatagcca ggcatccatt tcctggatta gcgggccaaa acggtaagga tcatcaatca
     9121 ggttttgctg accatgccag acaacagcca actgatagcg gaaaaaattc ttacgtcgcg
     9181 gaatgacacc gctaaagaat ccccgtgagt caagacactc cagttttgcg agtttgcgcc
     9241 cggttttcgg ttcaatcacc cacacatcgg tagcgtcggg taaaagggca cggacttcca
     9301 gtcccgcggt ggttttatgc attcccagta cggaaaaagg atccgcaaaa tggcctgcaa
     9361 ttagcgcgtt aatcacgtct ctatcgatac gatcggacat gcttgtcttc ctgttttatt
     9421 gtgtcacccc atccaattgg atttttgact tctggttgtg acattttttt gacctgaacg
     9481 gcgcagcact ctgtgcatcc tctctgcgtc gtcctcactt caggtaaggc tgtgaatact
     9541 catgtattca gccaccctta aagaatagcc aatgctctat ttaactcccg gtaaatcatg
     9601 aaacatctgc gcttactcct gtattacgca ctaacagggg cggcatcgcg ccccagattt
     9661 aatgaataaa gattacgcca gttgacgaag catccgacgc agcggctccg cggcccccca
     9721 cagcagctgg tcacccacgg taaaggctga caggaactcc ggtcccatat tcagcttacg
     9781 caggcggcct accggcgtgg tcagcgtgcc ggtaacggca gctggggtta gctcacgcat
     9841 agtgatttcc cgatcgttcg gaacgacttt cgcccacgga ttgtgcgcag ccagcagttc
     9901 ttcgacggtc ggaatagaca catctttttt caatttaata gtgaatgcct ggctgtggca
     9961 gcgcaatgcc ccgacacgca cacataaacc atctaccgga attacggaag atgtgttgag
    10021 gatcttgttg gtttccgcct gccctttcca ctcttcgcgg ctctgaccgt tatcgagctg
    10081 tttgtcgatc cacggaatca ggctacccgc cagcggcacg ccaaagttat ccaccggcag
    10141 ctcaccgcta cgggttaagg ttgtgacttt gcgttcgata tcgagaatag cagaggacgg
    10201 ggtcgcgagt tcatctgcca catggccata cagatggccc atctgggtta ataactcacg
    10261 catatgtcgc gcaccaccgc cggaagcggc ctggtaggtt gcaacggaca cccaatcaac
    10321 aagatcattg gcgaataaac cacccaacga catcaacatc aggcttacgg tacagttacc
    10381 gccaacaaaa gtcctgatgc cattatttaa tccgtcggta atgacgtcct gattgacggg
    10441 gtcaagaatg atgatggcgt catctttcat gcgcagagac gatgctgcgt caatccagta
    10501 accttgccat ccgctttcac gaagctttgg atagatttcg ttggtataat cgccgccctg
    10561 acaggtcaca atgatatcga gggcctttag cgcctccaga tcaaaggcat cctgaagtgt
    10621 gccagtggtt ccgccaaaag acggcgcagc ctggccaagc tgagaagtag aaaagaagac
    10681 agggcgaatg gcgttgaagt cgcgctcttc aaccatgcgt tgcatgagaa cggagccgac
    10741 cataccgcgc cagccgataa aaccaacatt tttcataagc gttttttcct gcaaagatgt
    10801 gtgctgtata aatgtgccgg tctcctcttg gcacatcttt caccatacaa aaagcagcca
    10861 aagtcgcaag tgaaattaat caatgatagc gaagccatca gtaatgcgac ttatcctgct
    10921 ttgttagcac acagaaagtc cgcggcaatt atcagggaat ttgagttatg aatgaaatca
    10981 tttctgcagc agttttattg atcctgatta tggatccgct cggaaacctg cctattttca
    11041 tgtccgtact gaaacatact gaaccgaaaa gacggcgggc aatcatggtg cgagagttgc
    11101 ttattgctct cctggtgatg ctggtgttcc tgtttgcggg tgagaaaatt ctggcatttc
    11161 tcagcctgcg agcagaaacc gtctccattt ctggcggcat cattctgttt ttaatcgcca
    11221 ttaagatgat tttccccagc gcttcaggaa atagcagcgg gcttccggca ggtgaagagc
    11281 catttatcgt gccgttggca attccgttag tcgccgggcc gactattctc gccacgctga
    11341 tgttgttgtc tcatcagtac ccgaatcaga tgggacatct ggtgattgct ctgctgctgg
    11401 cctggggcgg cacctttgtc atcctgctac agtcttcgct atttttacgt ctgctgggcg
    11461 agaaaggggt gaacgcactt gaacgcctga tgggattgat tctggtgatg atggcaaccc
    11521 agatgttcct cgacggcatt cgaatgtgga tgaaggggta acgaggagag tttttcgaaa
    11581 agaacccggt agcgtcacaa ctaccgggcg aacaaactta actcaacagc tggaacgcaa
    11641 tcatcccaac gatggcacca acagtgccga ggatggtttc catcatggtc caggttttca
    11701 gcgtttcggc ttcggtcgcg ccggtaaatt taccgaacaa ccagaaaccg gcgtcgttaa
    11761 cgtggctgac aacaatcgaa ccaccagcga tacaaatcga cagtgccgcc atttgcgcac
    11821 cggagtagtt cagttgttca atgaccggca tcaccagccc caccgccgtt aaacaggcaa
    11881 cggtggcaga cccctgaatg atgcgcactg cagcggccag cacgaagcag gtgatagcaa
    11941 tcggcaggcc catgccggtt aacgcttcgc ccagtgccgg acctacgcca gagtcaacca
    12001 gcacctgttt gaacacgccg cctgcaccaa tcaccagcag aatgatcccc gccggttgta
    12061 gcgcgtgacc gcaaatctcc atcactttgt cttttggcat gccctgacgc attgccaggc
    12121 cataaatcgc taccagacaa gcaaccagaa tcgcggtaaa tggatgacca ataaactcga
    12181 accattcgta agcagttgat ccttctggca caaaacgagc ggcaatggtt ttcagcccca
    12241 ccagcaccag cggcaacagg atcagcgaca ggctgaatcc gaaggacggc attttgcctt
    12301 cgccgagatg cggttcgctg atgtcgtcag gaatatgcaa ctccacgtaa cggctgatga
    12361 aattacccca cagcggcccg gcaataatca ttcccggaat tgccgcacac agaccaatca
    12421 ggatcatcca gccaaagtcg gcattcatct gcgatgccag cagcatcggc gctggtccag
    12481 gcaccagaaa tgccgccgct gccgccacgc ctgcgaataa tgggattacc agcttcacca
    12541 ggttcgtacc ggtgtggcgc gccattgaga aagcaacgct aatcagcaga actatcgcca
    12601 cttcaaagaa cagcggtagc gcacagacca accccgcaag gccgatggca taatgctcgc
    12661 ggctgtgacc gaaggatttg agcattttga cggcaatctg atcgactgcg ccggtttcat
    12721 gtaagatctt gccaaacata gctcccaggg cgacaaccac cgccaggaag ccgagggtgc
    12781 ctcccatccc tttttccatc gtcgctgcga ttttatcgag cggcataccg gaaaaaaggc
    12841 cagcccccat ggacaccacc atcaaagcca ggaaagcgtg catacgcgcc ttcatgacta
    12901 aaaacagcag cagtaaaaca gaccctactg ctgttaaaac aagcgttaat gtagtcacta
    12961 cttatttgcc ttttttaata acctcaatgg tgcttgccac aacaccttcc agcggttgat
    13021 cgatatccac caccagtaca tcggtttcgt ccgcacccgg ctcctgcagc gtttcaaact
    13081 gcgtcaccaa catttgggtt ttaaagaaat ggcctttgcg cgctttcaag cgactttcaa
    13141 tcacatcaaa atcgcctttc aggtagatga aagagagatt cggattacct tcacgcagca
    13201 agtcgcgata gtgctttttc agtgcagaac agacgatcag cgacacttta ttggtgcgct
    13261 gcatagcaaa cgcggcgtcg ttcagcgcct gcaaccaggg tttgcgatcg tcgtcattca
    13321 gcggttcgcc agacgccatt ttttcgatat tgcaccgtgg atggaggaaa tcgccatcaa
    13381 gaaacgcggc atgaagttga tgcgccactt cactggcgac cgcagatttg ccgctgcccg
    13441 atacgcccat caagacgtaa atgtggtgat catggttagt cgtgctcaaa gtggtgcccc
    13501 cacaatacaa gaattaaaga tgttacgggt aactgttatc ggtaacattg tccagccgga
    13561 caatatcaga agcaatatcc atccgtgcct taagtgtata agtgtgagct acttcaaatt
    13621 tgtaggctta aatagatccg cccggtgaca aggtgaaacc taaatctaac attttcggtg
    13681 tcacagattc gccacgaata cgcgccagca ggcgttcagc gccaatactg cccatccgct
    13741 cacgcggcgt cagcacgctc gctaaccgcg gctccatcac ctggccaatg tcatgaccgt
    13801 ggaaaccggc aatcgccata tcgtcaggaa ccttcaatcc cagacgctga cattcaaacg
    13861 ccgcgccgac cgccaggtca tcgttggtac agaacacgcc atccagctgc ggatattccc
    13921 gccgcgcctg gcgaatcagt tcaataccgg aagagtaaga agaagattgc tcaaccatca
    13981 cgctatacga caccagacct gcatccagca tcgcctgttc gtatcccttc tgtttgatga
    14041 tagtacgttc gtcgagacgc gcgccgagat aggcaatgtg gcaatgcccg cgagcaataa
    14101 tggcggtggt catctggcgt gccgcttcaa agttatcaaa accgacggcg atatcgaggc
    14161 acggcgactg gctgtccatg agttccacca ccgggatccc cgccacttca atcatcttta
    14221 aggtgcgcgg cgtgtgggta cgttcggtga ggatcagtcc gtcgatattc catgagagca
    14281 tggattcgag acgttcttgc tccatttccg gtttataacc gtagtgagcc agcatggtct
    14341 gataaccgtg cgcgtcggtg acgctttcga ttccgcgtaa tacttccgcg aaaacctggt
    14401 tggtgagaga aggtaacagg acgccaatcg cccggctggt ggcgttagag aggatatcgg
    14461 gcgcacgatt gggaatatag cccagttcat caagagcggc ggcaatcttg ccgcgtagag
    14521 cgacggaaac ctgctccggg ttgcgtaaaa aacggctgac cgtcattttg gtcacgccta
    14581 cacggtcagc cacatcctga agtacgggtc ttttcttttt catcgtcctg aaggtacaaa
    14641 agagatagat tctcttagtt taacacggac gcatcagaac cttcccgggg aaaacagtgc
    14701 ttgtttacaa ttattagata tacactaaat caattgcatc gcattgtgct aacgacgcgg
    14761 caaaaccccg aaagcgtgca tcagcacgcg gccggagcga gcgaggaagc ctgcaaaaag
    14821 gcaggcttca aagatgccgt tgagttttaa accggcggca gatcgaacag taacacttcg
    14881 ctgtcgctat ccgcatggat ggagattgcc tgctcatccc agattgccag accatcgctg
    14941 gtcgaggctt tcacgccgtt aatggtgaca ttgcctttca ccacctggat ccagacgcgg
    15001 cgttcagcgg caatctgatg caccgactgc tcatctttca gcaacgccca gcggtacagt
    15061 tccatatcct gatgcacttt caatgaacca tctcgcgcat ccggcgagag caccagctgt
    15121 ttgccctgta cggcatcgaa gcgacgctgt tcataacgcg gcgtaatacc gttttcttca
    15181 ggcatgatcc agatctgata cagatgcaga cgctcggtgc tgcttgggtt gtactctgag
    15241 tgacgaatac ccgtacccgc actcataatc tggaactcac ccgccggaac ctgctcttta
    15301 ttgcccatgc tgtcctgatg ctcaacagta ccttccagca cgtaggtcaa aatttccata
    15361 tctttatgcg ggtgagtgcc gaagccctgc cctgcttcaa tcacgtcgtc gttaatcacg
    15421 cgcagcgcgg agaagcccat aaagttcgga tcgtaatagt tggcaaaaga gaaagtatgc
    15481 caggaatcca gccagccatg atttgcatga ccacgttcat ttgctttgcg taagtagatc
    15541 atttgtattc gccccctgaa tgatttcgat gggcttagtg tggacccgat ctgcctggga
    15601 tgatagaggg tgaaaattgc cccctctgtt caaaaaaatt gaactattcg aggggccatc
    15661 aaacttaatt cgcgagagtc actgtggagg gagaggcttg ctcaaatccg cgttcaagga
    15721 tttccagatt ggtaagaact tcagattcct tgacgtaatt tggcgcaccg accgaatcat
    15781 ccgctgcgaa tcccggttcg cccggcataa tattagcctt caggctggtt tcctgctggt
    15841 cgataccgta tttaataaac gaacctttct taccgtgaac gataaatttc ggataatcga
    15901 ttttcaccag atggctggtt ttgacgatgg ctttcaggtc gccataaaac agttgcgctt
    15961 caaaggtgtc gtcaggattg gctttattac gcaggctgcg gatgtcataa gcgacgtgat
    16021 ccgggcgacc gaacagagaa ataatctggt ccatcgtatg cacaccaagg ccataaaacg
    16081 cgccatcctg cggcagccca ggtttggttt ctgccaccgg gcggtaatag tcaaaatggc
    16141 tttccacttc aacaatctct cccaacttgc cactttcaat cgcttttttc gctgtcagga
    16201 agcaggagtc aaagcgacga ttctgatacg gcgtgacggt cagccctttg cttttcgcca
    16261 acgcaaacag ctccttcgcc tgggcaagcg tcggggtgaa cggtttttcg accagcacat
    16321 ttttcccggc ttccagcgcg cgtttcgcgt actcgaaatg gctgtccgcg tgggtgcaga
    16381 caacaaccag cttaacatcg ggatcgttta gtacttcgtc gagatcgctg gtgaaatgga
    16441 tatgggaata aatgggagcc tgttcttccg gcttcgcatg gcgacgaaaa atatgcgcga
    16501 catgccagct atccttgcgg ttaagtacat acggcagatg gtaacgggtg gtgcttttgc
    16561 cgaagccaat aaaggcgcag ttgatgacca tgatttcgtc ctttttaagg tggttattta
    16621 caccttagcg caaagcggac gtggttccta ctggagtgcg cataacgaac acaagcactc
    16681 ccgtggataa attgagaacg aaagatcaaa aaaaagccag cacccggctg gctaagtaat
    16741 actggaagca atgtgagcaa tgtcgtgctt tcaggttctc cgcgagggtc ttcctgatcg
    16801 cgagacaata ataatcattc tcattcgcac ttgtccaaca ctttttgcaa aaaaatgcat
    16861 ttgactcgca tttgaaagtc aatgatgttg aaagggacat ttaccccaaa gaggacaaag
    16921 gaatgagtga gatagtaata cgccacgcag aaacacggga ttacgaggcc atcaggcaga
    16981 ttcacgccca gccggaggtg tattgcaaca cactacaggt gcctcatcct tccgatcata
    17041 tgtggcagga gcgactcgcc gatcgtcccg gcatcaagca actcgtcgcc tgtattgatg
    17101 gagacgtcgt gggccatctc accattgacg tgcaacagcg cccacgccgc agtcatgttg
    17161 ccgattttgg tatctgtgtc gactctcgtt ggaagaaccg cggcgtcgcc agcgccctga
    17221 tgcgagagat gattgaaatg tgcgacaact ggttgcgggt agatcgcatt gaactaaccg
    17281 tgtttgtcga taacgccccg gcaattaagg tctataaaaa atacggcttt gaaattgaag
    17341 ggactggtaa gaagtacgca ttgcgtaatg gtgaatatgt cgatgcatat tatatggcgc
    17401 gggtgaagta agatagtgcc ctttttctga gatggaaaaa gggtgtcatt caaaatcgac
    17461 ataccttcct ttaaggtatt tatttaccca atacatatat tgagatttaa ctcataatta
    17521 cttcctaaag tgtaatattt tattttttaa tatatacgcc tacaatttcc tggagtaaat
    17581 aaataacaat taacaagcat aatattgcca ttgataaaat agcatgccat aaaaggactt
    17641 ttcagggatg agtaatattg tttacctgac agtaacggga gaacaacaag gaagcatctc
    17701 cgcaggttgt gggacttctg agtctacagg taatcgttgg cagagcgggc atgaggatga
    17761 aatatttaca ttctcactct taaataatat taataatacg gggcttggtt cacagttcca
    17821 tggtataaca ttttgtaaat taattgataa aagcactcca ttatttatta attccattaa
    17881 caataatgaa caattattta tgggatttga cttctatcga ataaatagat ttggtagatt
    17941 ggaaaagtat tattatatac aactaagagg cgctttttta tcggctattc atcaccagat
    18001 cattgaaaac caactggata cagaaacaat aactattagt tatgaattta tcctctgtca
    18061 acatcttatc gcaaataccg agttcagcta tttggcactc cctgaaaatt ataaccgttt
    18121 gtttttacca aattcaaaaa accaaacaaa taatcgtttc aaaacgttaa acagcaaagc
    18181 tattggcagg ctacttgctg ctggtggcgt atacaatggg aacattgaag gattcagaga
    18241 tactgcggaa aaactgggtg gagatgcaat aaaaggctat gatcaaatac taaatgaaaa
    18301 aacagcgggc atagcgatag caacagcatc tattctttta acaaagcgtt ctaatgttga
    18361 tacatataca gaaataaata gttacttagg caaacttaga ggtcaacaaa aacttcttga
    18421 tggtatagac ataatagaaa taatatacat taagagacct tcaaaagact tagctaactt
    18481 acgaaaggag tttaataaaa ctgtaagaaa aaattttctt atcaaacttg caaaaacctc
    18541 cgaagcatct ggaagattca acgccgaaga ccttttaaga atgagaaagg gcaatgttcc
    18601 tctaaattat aatgttcacc ataaactatc tctagatgat ggtggtacta atgatttcga
    18661 aaatttagta ttaatcgaaa acgaaccata tcataaagtt tttactaaca tgcaatcacg
    18721 aatagctaag ggaatattag taggtgaaag caaaatcact ccctgggcca ttccatctgg
    18781 ctcaatttat cctcccatg
//
LOCUS       DADMHC010000064        18736 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.064, whole genome shotgun sequence.
ACCESSION   DADMHC010000064 DADMHC010000000
VERSION     DADMHC010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 18736)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18736)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18736
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.064"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..893
                     /locus_tag="JNZ57_001886"
     CDS             <1..893
                     /locus_tag="JNZ57_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8828121.1"
                     /translation="WFNIKERGRPMGFFNAASTIGVAVSPPILAAMMLVMGWRGMFIT
                     IGVLGIFLAIGWYMLYRNREHVELTAVEQAYLNAGSVNARRDPLSFAEWRSLFRNRTM
                     WGMMLGFSGINYTAWLYLAWLPGYLQTAYNLDLKSTGLMAAIPFLFGAAGMLVNGYVT
                     DWLVKGGMAPIKSRKICIIAGMFCSAAFTLIVPQATTSMTAVLLIGMALFCIHFAGTS
                     CWGLIHVAVASRMTASVGSIQNFASFICASFAPIITGFIVDTTHSFRLALIICGCVTA
                     AGALAYIFLVRQPINDPRKD"
     gene            complement(942..2597)
                     /gene="tsr"
                     /locus_tag="JNZ57_001887"
     CDS             complement(942..2597)
                     /gene="tsr"
                     /locus_tag="JNZ57_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HAY8828122.1"
                     /translation="MLKRIKIVTSLLLVLAVFGLLQLTSGGLFFNALKNDKENFTVLQ
                     TIRQQQSTLNGSWVALLQTRNTLNRAGIRYMMDQNNIGSGSTVAELMQSASISLKQAE
                     KNWADYEALPRDPRQSTAAAAEIKRNYDIYHNALAELIQLLGAGKINEFFDQPTQGYQ
                     DGFEKQYVAYMEQNDRLYDIAVSDNNASYSQAMWILVGVMIVVLAVIFAVWFGIKASL
                     VAPMNRLIDSIRHIAGGDLVKPIEVDGSNEMGQLAESLRHMQGELMRTVGDVRNGANA
                     IYSGASEIATGNNDLSSRTEQQAASLEETAASMEQLTATVKQNAENARQASHLALSAS
                     ETAQRGGKVVDNVVQTMRDISTSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQ
                     GRGFAVVAGEVRNLAQRSAQAAREIKSLIEDSVGKVDVGSTLVESAGETMAEIVSAVT
                     RVTDIMGEIASASDEQSRGIDQVGLAVAEMDRVTQQNAALVEESAAAAAALEEQASRL
                     TEAVAVFRIQQQQRETSAVVKTVTPAAPRKMAVADSEENWETF"
     gene            complement(2716..3162)
                     /gene="hpaR"
                     /locus_tag="JNZ57_001888"
     CDS             complement(2716..3162)
                     /gene="hpaR"
                     /locus_tag="JNZ57_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoprotocatechuate degradation operon regulator
                     HpaR"
                     /protein_id="HAY8828123.1"
                     /translation="MHDSLTIALLQAREAAMSYFRPIVKRHNLTEQQWRIVRILAESP
                     SMDFHDLAYRACILRPSLTGILTRMERDGLVLRLKPINDQRKLYISLTKEGQALYNRA
                     QTQIEEAYRQIEAQFTAEKMQQLTHLLEEFIALGNSRQEAIPGDNE"
     gene            3434..4723
                     /locus_tag="JNZ57_001889"
                     /pseudo
     CDS             3434..4723
                     /locus_tag="JNZ57_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710093.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate degradation bifunctional
                     isomerase/decarboxylase"
     gene            4720..6186
                     /gene="hpaE"
                     /locus_tag="JNZ57_001890"
     CDS             4720..6186
                     /gene="hpaE"
                     /locus_tag="JNZ57_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-carboxymethyl-2-hydroxymuconate semialdehyde
                     dehydrogenase"
                     /protein_id="HAY8828124.1"
                     /translation="MKKVNHWINGKNVAGNDYFQTTNPATGEVLADVASGGEAEINQA
                     VAAAKEAFPKWANLPMKERARLMRRLGDLIDQNVPEIAAMETADTGLPIHQTKNVLIP
                     RASHNFEFFAEVCQQMNGKTYPVDDKMLNYTLVQPVGVCALVSPWNVPFMTATWKVAP
                     CLALGNTAVLKMSELSPLTADRLGELALEAGIPAGVLNVVQGYGATAGDALVRHHDVR
                     AVSFTGGTATGRNIMKNAGLKKYSMELGGKSPVLIFEDADIERALDAALFTIFSINGE
                     RCTAGSRIFIQQSIYPEFVKRFAERANRLRVGDPNDPNTQVGALISQQHWEKVSGYIR
                     LGIEEGATLLGGGPDKPSDLPAHLKGGNFLRPTVLADVDNRMRVAQEEIFGPVACLLP
                     FKDEAEGLRLANDVEYGLASYIWTQDVSKVLRLARGIEAGMVFVNTQNVRDLRQPFGG
                     VKASGTGREGGEYSFEVFAEMKNVCISMGDHPIPKWGV"
     gene            6188..7039
                     /gene="hpaD"
                     /locus_tag="JNZ57_001891"
     CDS             6188..7039
                     /gene="hpaD"
                     /locus_tag="JNZ57_001891"
                     /EC_number="1.13.11.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxyphenylacetate 2,3-dioxygenase"
                     /protein_id="HAY8828125.1"
                     /translation="MGKLALAAKITHVPSMYLSELPGKNHGCRQGAIDGHKEISKRCR
                     EMGVDTIIVFDTHWLVNSAYHINCADHFEGVYTSNELPHFIRDMTYNYEGNPELGQLI
                     ADEALKLGVRAKAHNIPSLKLEYGTLVPMRYMNEDKHFKVVSISAFCTVHDFADSRKL
                     GEAILKAIEQYDGTVAVLASGSLSHRFIDDQRAEEGMNSYTREFDRQMDERVVKLWRE
                     GQFKEFCNMLPEYADYCYGEGNMHDTVMLLGMLGWDKYDGKVEFITELFPSSGTGQVN
                     AVFPLPA"
     gene            7049..7429
                     /locus_tag="JNZ57_001892"
     CDS             7049..7429
                     /locus_tag="JNZ57_001892"
                     /EC_number="5.3.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-carboxymethyl-2-hydroxymuconate
                     Delta-isomerase"
                     /protein_id="HAY8828126.1"
                     /translation="MPHFIVECSDNIREEADLPGLFAKVNPTLAATGIFPLAGIRSRV
                     HWVDTWQMADGQRDYAFVHMTLKIGAGRSLESRQQAGEMLFELIKTHFAALMESRLLA
                     LSFEIEELHPTLNFKQNNVHALFK"
     gene            7540..8343
                     /gene="hpaH"
                     /locus_tag="JNZ57_001893"
     CDS             7540..8343
                     /gene="hpaH"
                     /locus_tag="JNZ57_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710089.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-hepta-3-ene-1,7-dioic acid hydratase"
                     /protein_id="HAY8828127.1"
                     /translation="MFDKHTHTLIAQRLDQAEKQREQIRAISLDYPEITIEDAYAVQR
                     EWVRLKIAEGRTLKGHKIGLTSKAMQASSQISEPDYGALLDDMFFHDGSDIPTDRFIV
                     PRIEVELAFVLAKPLRGPNCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFD
                     TISDNAANAGVILGGRPIKPDELDLRWISALMYRNGVIEETGVAAGVLNHPANGVAWL
                     ANKLAPYDVQLEAGQIILGGSFTRPVPARKGDTFHVDYGNMGSISCRFV"
     gene            8354..9142
                     /gene="hpaI"
                     /locus_tag="JNZ57_001894"
     CDS             8354..9142
                     /gene="hpaI"
                     /locus_tag="JNZ57_001894"
                     /EC_number="4.1.2.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-2-oxoheptanedioate aldolase"
                     /protein_id="HAY8828128.1"
                     /translation="MENSFKAALKAGRPQIGLWLGLSSSYSAELLAGAGFDWLLIDGE
                     HAPNNVQTVLTQLQAIAPYPNQPVVRPSWNDPVQIKQLLDVGTQTLLVPMVQNADEAR
                     EAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQI
                     LDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILIANEQL
                     AKRYLELGALFVAVGVDTTLLARAAEALAARFGAQATAVKPGVY"
     gene            9317..10630
                     /gene="hpaX"
                     /locus_tag="JNZ57_001895"
     CDS             9317..10630
                     /gene="hpaX"
                     /locus_tag="JNZ57_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001597174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate permease"
                     /protein_id="HAY8828129.1"
                     /translation="MSDTSPAIPESIDPANQHKALTAGQQAVIKKLFRRLIVFLFVLF
                     IFSFLDRINIGFAGLTMGRDLGLSATMFGLATTLFYAAYVIFGIPSNIMLSIVGARRW
                     IATIMVLWGIASTATMFATGPTSLYVLRILVGITEAGFLPSILLYLTFWFPAYFRARA
                     NALFMVAMPVTTALGSIVSGYILSLDCVMALKGWQWLFLLEGFPSVLLGVMVWFWLDD
                     SPDKAKWLTKEDKKCLQEMMDNDRLTLVQPEGAISHHAMQQRSMWREIFTPVVMMYTL
                     AYFCLTNTLSAISIWTPQILQSFNQGSSNITIGLLAAVPQICTILGMVYWSRHSDRRQ
                     ERRHHTALPYLFAAAGWLLASATDHNMIQMLGIIMASTGSFSAMAIFWTTPDQSISLR
                     ARAIGIAVINATGNIGSALSPFMIGWLKDLTGSFNSGLWFVAACW"
     gene            10702..11580
                     /gene="hpaA"
                     /locus_tag="JNZ57_001896"
                     /pseudo
     CDS             10702..11580
                     /gene="hpaA"
                     /locus_tag="JNZ57_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224927.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate catabolism regulatory
                     protein HpaA"
     gene            11831..13393
                     /gene="hpaB"
                     /locus_tag="JNZ57_001897"
     CDS             11831..13393
                     /gene="hpaB"
                     /locus_tag="JNZ57_001897"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000801462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     oxygenase component"
                     /protein_id="HAY8828130.1"
                     /translation="MKPEDFRASTQRPFTGEEYLKSLQDGREIYIYGERVKDVTTHPA
                     FRNAAASVAQLYDALHKPEMQDSLCWNTDTGSGGYTHKFFRVAKSADDLRQQRDAIAE
                     WSRLSYGWMGRTPDYKAAFGCALGANPGFYGQFEQNARNWYTRIQETGLYFNHAIVNP
                     PIDRHLPTDKVKDVYIKLEKETDAGIIVSGAKVVATNSALTHYNMIGFGSAQVMGENP
                     DFALMFVAPMDADGVKLISRASYEMVAGATGSPYDYPLSSRFDENDAILVMDNVLIPW
                     ENVLIYRDFDRCRRWTMEGGFARMYPLQACVRLAVKLDFITALLKKSLECTGTLEFRG
                     VQADLGEVVAWRNTFWALSDSMCSEATPWVNGAYLPDHAALQTYRVLAPMAYAKIKNI
                     IERNVTSGLIYLPSSARDLNNPQIDQYLAKYVRGSNGMDHVQHIKILKLMWDAIGSEF
                     GGRHELYEINYSGSQDEIRLQCLRQAQSSGNMDKMMAMVDRCLSEYDQNGWTVPHLHN
                     NDDINMLDKLLK"
     gene            13411..13923
                     /locus_tag="JNZ57_001898"
     CDS             13411..13923
                     /locus_tag="JNZ57_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase reductase
                     subunit"
                     /protein_id="HAY8828131.1"
                     /translation="MQLDEQRLRFRDAMASLSAAVNIITTEGDAGQCGITATAVCSVT
                     DTPPSLMVCINANSAMNPVFQGNGKLCVNVLNHEQELMARHFAGMTGMAMEERFSLSC
                     WQKGPLAQPVLKGSLASLEGEIRDVQAIGTHLVYLVEIKNIILSAEGHGLIYFKRRFH
                     PVMLEMEAAI"
     gene            14316..16466
                     /gene="btsT"
                     /locus_tag="JNZ57_001899"
     CDS             14316..16466
                     /gene="btsT"
                     /locus_tag="JNZ57_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313340.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate/proton symporter BtsT"
                     /protein_id="HAY8828132.1"
                     /translation="MDTKKLFKHIPWVILGIIGAFCLAVVALRRGEHVSALWIVVASV
                     SVYLVAYRYYSLYIAQKVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHHFAAIAGAG
                     PLVGPVLAAQMGYLPGTLWLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKEEMGPV
                     PGTIALFGCFLIMIIILAVLALIVVKALAESPWGVFTVCSTVPIALFMGIYMRFIRPG
                     RVGEVSVIGIVLLVASIYFGGVIAHDPYWGPALTFKDTTITFALIGYAFVSALLPVWL
                     ILAPRDYLATFLKIGVIVGLALGIVVLNPELKMPAMTQYIDGTGPLWKGALFPFLFIT
                     IACGAVSGFHALISSGTTPKLLANETDARFIGYGAMLMESFVAIMALVAASIIEPGLY
                     FAMNTPPAGLGITMPNLHEMGGENAPIIMAQLKDVTAHAAATVSSWGFVISPEQILQT
                     AKDIGEPSVLNRAGGAPTLAVGIAHVFHKVLPMADMGFWYHFGILFEALFILTALDAG
                     TRSGRFMLQDLLGNFIPFLKKTDSLVAGIIGTAGCVGLWGYLLYQGVVDPLGGVKSLW
                     PLFGISNQMLAAVALVLGTVVLIKMKRTQYIWVTVVPAVWLLICTTWALGLKLFSTNP
                     QMEGFFYMASQYKEKIANGTDLTAQQIANMNHIVVNNYTNAGLSILFLIVVYSIIFYG
                     FKTWLAVRNSDKRTDKETPYVPIPEGGVKISSHH"
     gene            16597..16800
                     /locus_tag="JNZ57_001900"
     CDS             16597..16800
                     /locus_tag="JNZ57_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HAY8828133.1"
                     /translation="MFGNLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSY
                     EEFFRERQNARYGGDGKGGMRCC"
     gene            16811..17767
                     /gene="yjiA"
                     /locus_tag="JNZ57_001901"
     CDS             16811..17767
                     /gene="yjiA"
                     /locus_tag="JNZ57_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313338.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HAY8828134.1"
                     /translation="MNPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVS
                     VDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMA
                     DPGPIIQTFFSHEILCQRYLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLTKT
                     DIAGEAEKLRERLARINARAPVYTVTHGDIDLGLLFNTNGFMLEENVVSTKPRFHFIA
                     DKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLFQGV
                     QRLYSADWDRPWGDEKPHSTMVFIGIQLPEDEIRAAFAGLKK"
     gene            complement(17845..>18736)
                     /locus_tag="JNZ57_001902"
     CDS             complement(17845..>18736)
                     /locus_tag="JNZ57_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001569102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin acylase"
                     /protein_id="HAY8828135.1"
                     /translation="DRVTEIDRLLEQKPRLTADQAWDVIRQTSRQDLNLRLFLPTLQA
                     ATSGLTQSDPRRQLVDTLTRWDGINLLNDDGKTWQQPGSAILNVWLTSMLKRTVVAAV
                     PMPFDKWYSASGYETTQDGPTGSLNISVGAKILYEAVQGDKSPIPQAVDLFAGKPQQE
                     VVLAALEDTWETLSKRYGNNVSNWKTPAMALTFRANNFFGVPQAAAEETRHQAEYQNR
                     GTENDMIVFSPTTSDRPVLAWDVVAPGQSGFIAPDGTVDQHYEDQLKMYENFGRKSLW
                     LTKQDVEAHKESQEVLHVQR"
BASE COUNT         4289 a         5184 c         4991 g         4272 t
ORIGIN      
        1 actggttcaa catcaaagag cgcggacgcc cgatgggctt cttcaacgca gcttctacca
       61 ttggcgttgc cgtaagccca ccgattctgg cggcgatgat gctggtgatg ggctggcgcg
      121 ggatgtttat taccattggt gtactgggga tttttctcgc catcggctgg tatatgctct
      181 atcgcaaccg cgagcacgta gaactgactg ccgttgagca agcttatctc aatgcaggta
      241 gcgtcaatgc ccgccgagat ccgctcagtt ttgccgaatg gcgcagcctg ttccgtaacc
      301 gtacaatgtg gggaatgatg ctcggattca gtggcatcaa ctacactgcg tggctgtatc
      361 tggcctggct tcctggttac ctgcaaacag cctataacct ggatttaaaa agcacagggt
      421 tgatggcggc tatccctttc ctgtttgggg ctgccgggat gctggtcaac ggttacgtta
      481 ccgactggct ggtcaaaggg ggaatggctc cgattaaaag ccgtaagatc tgcattattg
      541 ccgggatgtt ctgttctgcc gcctttacgc tgatagtacc acaagcgaca acatccatga
      601 cggcggttct gctgattggc atggcactgt tctgtattca ctttgccgga acatcctgct
      661 ggggcttgat ccacgtcgca gttgcttctc gcatgactgc gtcggtgggc agtatccaga
      721 actttgccag cttcatctgc gcctcttttg cgccgatcat tactggtttt attgttgata
      781 ccacccactc attccgtctg gcactaatca tctgcggttg cgtcaccgca gcgggggcac
      841 tggcgtacat cttcctggtt cgtcagccga tcaacgaccc acgtaaagat taatctcctt
      901 atgcccgata acattttgct tatcgggcat tttcatggcg attaaaatgt ttcccagttc
      961 tcctcgctat ctgccacggc cattttacgc ggcgcagctg gcgtcacggt ttttaccaca
     1021 gccgatgttt cacgctgctg ttgctgaatc cggaacactg ccactgcttc ggtcaggcga
     1081 ctggcctgct cttccagcgc ggcggcggca gcggcagact cttccaccag cgcggcgttc
     1141 tgttgagtta cccggtccat ctcagcaacc gctaagccaa cctgatcgat accacggctc
     1201 tgctcatcag aagcagaagc aatttcgccc ataatgtccg tcacgcgggt cacggcgctg
     1261 acaatctccg ccattgtttc cccggcgctt tcgaccagcg tagagccaac atccactttc
     1321 cccaccgagt cttcaatcag gcttttaatt tcacgagccg cctgggcgct gcgctgggcc
     1381 agattacgca cttctcccgc gaccaccgca aaaccgcgcc cttgctcacc cgcacgcgca
     1441 gcctcaaccg ccgcgttcaa agccagaata ttggtctgga aggcaatgcc gtcaattacg
     1501 ctgataatat cggcgatttt ctgcgaactg gtggagatat cgcgcatagt ctgcaccacg
     1561 ttatctacca ctttgccgcc gcgttgcgcc gtttcagaag cacttaacgc cagatggctg
     1621 gcctggcgcg cattttcggc gttctgcttc accgttgcgg tcagttgctc catgctggct
     1681 gccgtctctt ccagcgaagc ggcctgttgc tcggtgcgcg aagagagatc gttattgccg
     1741 gtggcgattt cgctggcacc gctatagatg gcattggccc cgttgcgcac atcaccgacg
     1801 gtacgcatca gctctccctg catatggcgc aaactctctg ccagttgccc catctcatta
     1861 gagccatcca cctcaatcgg tttcaccaga tcgccgcctg caatatgacg aatgctgtca
     1921 atcaggcgat tcattggcgc taccagcgag gctttaatac cgaaccagac ggcgaagatg
     1981 accgccagta cgacgatcat cacgcccacc agaatccaca tcgcctggct gtaggaggca
     2041 ttgttatcgc tgacggcgat atcatagagc cgatcgtttt gctccatgta agccacatac
     2101 tgcttctcga aaccgtcctg atatccctgg gtcggctgat caaagaactc gttgattttg
     2161 cctgcaccta acagttggat cagctccgcc agcgcattgt gataaatatc gtaattacgt
     2221 ttgatctctg ccgctgcggc ggtgctctga cgcgggtcac gcggcaacgc ttcgtaatcc
     2281 gcccagtttt tttccgcctg tttcagcgaa atactggcac tctgcatcag ctcagcaacg
     2341 gttgaaccgc taccaatatt attctgatcc atcatgtagc ggatacccgc gcggttgagg
     2401 gtgttacgcg tctgcaacaa cgcgacccag ctgccattca gcgtggattg ctgctggcga
     2461 atggtttgta aaacagtgaa attttctttg tcattcttta aggcattaaa gaacagaccg
     2521 cctgatgtca gttgtaaaag gccaaaaacg gccaaaacca gcagtaagct ggtcacgatc
     2581 ttgatacgtt ttaacatggt ttctctttcc tgtggaccga tgcaagattt tcggcctgga
     2641 aagcaaaaac tttatgaaaa ggtgtaaccc gccatccatg gaaaaaccag gcgctggtta
     2701 tcagatacta aaaagttatt cattatcgcc cgggatggct tcttgtcggg aattgcccag
     2761 agcaataaat tcctctaaca gatgggttaa ctgttgcatt ttctcggcag taaactgagc
     2821 ttcaatctgc cgataggctt cttcaatctg tgtctgagcg cggttataca gcgcctgccc
     2881 ctctttggtt agcgagatat agagcttccg ctgatcattg atcggcttta atcgcaacac
     2941 taaaccgtcg cgttccatcc gcgtgagaat cccggtcagg cttgggcgca aaatgcaggc
     3001 gcgatacgcc agatcgtgaa aatccattga tgggctttcc gccagaatac gcacgatgcg
     3061 ccactgttgc tcagtcaaat tatgccgttt aacgattggg cgaaaataac tcatcgccgc
     3121 ttctcgcgcc tggagcaacg caatggttag tgagtcgtgc attatctttc ccctgaaaaa
     3181 ttcaaaatca ttaatataga aacagttaat cgtcacgtta ccgggactgc gctgcccctg
     3241 caattcctga ttttatcaaa attgatgata ttttattaac ttactgatat ttaatatttt
     3301 attatcttta aatgtaaata gtttgttaat tagatcacat ttacatcact tacttttgcc
     3361 aaactacgca atcgggaata aaagtaatca ttaacatatt aatgattaag atgatcgaat
     3421 ccgaggagtg gtaatgaaag gcactatctt cgccgtagcg ttgaaccatc gcagccaact
     3481 tgatgcatgg caggaagcgt tccagcaatc cccctacaaa gccccgccta aaactgcggt
     3541 ctggtttatt aaaccgcgca atacggtgat tggttgcggt gaaccgattc cctttccata
     3601 gggtgaaaag gtactgagcg gtgcgactgt tgcgctgatt gtgggaaaaa cggcgacgaa
     3661 agtacgtgaa gaagatgcgg cagagtacat cgccggatat gcgcaggcta acgacgtcag
     3721 cctgccggaa gagagctttt accgcccggc aatcaaagca aaatgtcgtg atggattctg
     3781 ccccattggc gaaaccgtgg ctctcagcaa tgtcgataat ctgaccatct ataccgagat
     3841 caacgggcgt cctgccgatc actggaatac cgccgattta caacgtaacg ccgcgcagtt
     3901 gctgagcgcc ctgagcgaat ttgccacgct gaatccaggc gacgccattc tgctcggcac
     3961 gccacaggcg cgcgtggaaa tacagccagg cgagcgcgtt cgtgttctcg cagaaggttt
     4021 cccgccgctg gaaaatccgg tagtggacga acgtgaagtg accacgcgca agagcttccc
     4081 aacgcagcca cacccgcacg gcacgctgtt tgccctcggc ctgaactacg ccgaccacgc
     4141 cagcgaactg gaatttaagc caccggaaga accgctggtg ttcctgaaag cgccaaatac
     4201 cctcactggc gataaccaga cctccgtgcg tccaaacaat attgaataca tgcactatga
     4261 agcggagctg gtggtagtta ttggcaaaca ggcgcgtaac gtcagcgaag ccgatgccat
     4321 ggattatgtc gcgggctaca ccgtgtgtaa cgactacgcc attcgtgact atctggaaaa
     4381 ctactaccgc cctaacctgc gggtaaaaag ccgcgacgga ctgacgccga tgctttcaac
     4441 catcgtgccg aaagaggcga tcccggaccc gcataatctg acccttcgca ccttcgtcaa
     4501 cggcgagtta cgccagcaag gcaccaccgc cgatctgatc ttcagcgtgc ccttcctgat
     4561 cgcctactta agtgaattta tgaccctgaa tccgggcgac atgatcgcca ccggcacacc
     4621 caaaggctta tctgacgtgg tgcctggcga tgaagtagtg gtggaagtag aaggcgtggg
     4681 ccgcctggtg aaccgaattg tgagtgagga tacagcgaaa tgaaaaaagt aaatcattgg
     4741 atcaacggca aaaatgttgc aggtaacgac tacttccaga ccaccaatcc ggcaacgggt
     4801 gaagtgctgg cggatgtggc ctctggcggt gaagcggaga tcaatcaggc ggtagcggca
     4861 gcgaaagagg cgttcccgaa atgggccaat ctgccgatga aagagcgtgc gcgcctgatg
     4921 cgccgtctgg gcgatctgat cgaccagaac gtgccagaga tcgccgcgat ggaaaccgcg
     4981 gacaccggcc tgccgatcca tcagaccaaa aatgtgttga tcccacgcgc ttcccacaac
     5041 tttgaatttt tcgcggaagt ctgccagcag atgaacggca agacctatcc ggttgacgac
     5101 aagatgctca actacacgct ggtgcagccg gtgggcgttt gtgcgctggt atcgccgtgg
     5161 aacgtaccgt ttatgaccgc cacatggaag gtcgcgccgt gtctggcgct gggcaatacc
     5221 gcggtactga aaatgtcgga actctccccg ctgaccgctg accgcctggg tgagctggcg
     5281 ctggaagccg gtattccggc aggcgtgctg aacgtggtac agggctacgg cgcaaccgca
     5341 ggggatgcgc tggttcgtca tcatgacgta cgtgccgtgt cgttcaccgg cggtacggcc
     5401 accgggcgca acatcatgaa aaacgccggg ctgaaaaaat actccatgga actgggcggt
     5461 aaatcgccgg tgctgatttt tgaagatgcc gatattgaac gcgcgctgga cgccgccctg
     5521 ttcaccatct tctcgatcaa cggcgaacgc tgcaccgccg gttcacgcat ctttattcag
     5581 caaagcatct acccggaatt cgttaaacgc tttgccgaac gcgccaaccg tctgcgcgtg
     5641 ggcgatccga acgatccgaa tacccaggtt ggcgcgctta tcagccagca gcactgggaa
     5701 aaagtctccg gctatatccg tctcggcatt gaagaaggcg ccaccctgct ggggggcggc
     5761 ccggataaac cgtctgacct gcctgcacac ctgaaaggcg gcaacttcct gcgcccaacg
     5821 gtgctggcag acgttgataa ccgtatgcga gtcgcccaag aagagatttt cgggccggtc
     5881 gcctgcctgc tgccgtttaa agacgaagct gaaggcttac gcctggcaaa cgacgtggag
     5941 tacggcctcg cgtcgtacat ctggacacag gatgtcagca aagtgttacg cctggcgcgt
     6001 ggcattgaag ctggcatggt gttcgtcaac acccagaacg tgcgtgacct gcgccagcca
     6061 tttggcggcg taaaagcctc cggcaccggg cgtgaaggcg gtgagtacag cttcgaagtg
     6121 ttcgcggaaa tgaagaacgt ctgcatttcc atgggcgacc atccaattcc gaaatgggga
     6181 gtctgatatg ggtaagttag cgttagccgc caagatcacg cacgtaccgt cgatgtatct
     6241 ctctgaactg ccagggaaaa accacggttg ccgccagggc gcgatcgacg ggcataaaga
     6301 gatcagcaag cgttgccggg aaatgggcgt cgataccatt atcgttttcg atacccactg
     6361 gctggtcaac agtgcttatc acatcaactg tgcagaccat tttgaaggcg tctacaccag
     6421 caacgagctg ccgcatttta tccgcgatat gacctacaac tacgagggca acccggagtt
     6481 ggggcagctt attgccgatg aagccttaaa gctcggcgtg cgggcaaaag cgcacaacat
     6541 tcccagcctg aaactggaat acggcacgct ggtgccgatg cgctacatga atgaagacaa
     6601 gcacttcaaa gtggtctcca tttcggcttt ctgcacggtt cacgattttg ccgacagccg
     6661 caagctgggc gaagcgattc tgaaagcgat cgaacagtac gacggcaccg tggcggtcct
     6721 tgccagcggt tcgttatcgc accgctttat tgacgatcag cgtgcagaag aagggatgaa
     6781 cagctacacc cgcgagttcg accgccagat ggacgagcgc gtggtgaagt tgtggcgcga
     6841 aggccagttc aaagagttct gcaatatgct gccggagtac gccgactact gctacggcga
     6901 aggcaatatg cacgacacgg tgatgctgct ggggatgctc ggctgggata aatacgacgg
     6961 caaggtggag ttcatcaccg agctattccc aagctctggc accggtcagg ttaacgctgt
     7021 tttcccgctt cccgcgtaag gacgttttat gccgcacttt atcgttgaat gcagtgacaa
     7081 catccgcgaa gaagccgacc tgccggggtt gttcgccaaa gtgaatccga cgctggcagc
     7141 cacgggtatt tttccgctgg cgggtattcg cagccgcgtg cattgggtcg atacctggca
     7201 gatggccgac gggcagcgtg attatgcctt cgtgcatatg acgttgaaaa tcggcgcagg
     7261 tcgcagcctg gaaagccgtc agcaggcggg tgaaatgctg tttgaactga ttaaaacgca
     7321 cttcgccgcc ctgatggaga gccgcctgct ggcgttgtcg tttgagattg aagagctgca
     7381 tccgacgctg aattttaaac aaaacaacgt gcacgcattg tttaagtagc gcgcagattg
     7441 cccggtggcg ctgcgcttac cgggcctaca aaaccccaaa ccgtacaccg taggccggat
     7501 aaggcgcagc cgcatccggc aatgccacag gatatcgcta tgttcgataa acacacccac
     7561 accctgatcg cccagcgtct ggatcaggca gaaaaacagc gcgaacagat ccgcgcgatc
     7621 tcgctggatt acccagagat caccatcgaa gacgcttacg cggtgcagcg cgaatgggtt
     7681 cgcctgaaaa tcgccgaagg ccgtacgctg aaaggccaca aaatcggtct gacctcaaaa
     7741 gcaatgcagg ccagctcgca gatcagcgaa ccagattacg gtgccctgct ggatgacatg
     7801 ttcttccacg atggcagcga tatcccgacc gatcgcttta tcgtgccgcg cattgaagtg
     7861 gagctggctt tcgtgctggc aaaaccgctg cgtgggccaa actgcacgct gttcgacgtc
     7921 tacaacgcca cggactacgt gatcccggcg ctggagctga tcgacgctcg ctgccacaac
     7981 atcgatccgg aaacccagcg cccgcgcaaa gtgttcgaca ccatttctga taacgccgcc
     8041 aacgccgggg tgatcctcgg tggtcgtccg atcaaaccag acgaactgga tctgcgttgg
     8101 atctccgccc tgatgtatcg caatggcgtg attgaagaaa ccggcgtcgc cgctggcgtg
     8161 ctgaatcatc cggcaaacgg cgtggcctgg ctggcgaaca aactcgcacc gtatgacgta
     8221 caactggaag ccgggcaaat cattctcggt ggttcgttca cccgcccggt tccggcgcgt
     8281 aagggcgaca ccttccacgt cgattacggc aacatgggtt ccattagctg ccgctttgtt
     8341 taaggagaga acgatggaaa acagctttaa agcggcgctg aaagcaggcc gtccgcagat
     8401 cggattatgg ctggggctga gtagcagcta cagcgcagag ttactggccg gagcaggatt
     8461 cgactggttg ttgatcgacg gtgagcacgc gccgaataac gtgcaaaccg tgctcaccca
     8521 gctacaggcg attgcgccct accccaacca gccggtagta cgtccgtcgt ggaacgatcc
     8581 ggtgcaaatc aaacaactgc tggacgtcgg cacacaaacc ttgctggtgc cgatggtaca
     8641 aaacgctgac gaagcccgtg aagcggtacg cgccacccgt tatccccccg ccggtattcg
     8701 cggtgtgggc agtgcgctgg cccgcgcctc gcgctggaat cgtattcctg attacctgca
     8761 aaaagccaac gatcaaatgt gcgtgctggt gcagatcgaa acgcgtgagg caatgaagaa
     8821 cttaccgcag attctggacg tggaaggcgt cgacggcgtg tttatcggcc cggcggatct
     8881 gagcgccgat atgggttatg ccggtaatcc gcagcacccg gaagtacagg ccgccattga
     8941 gcaggcgatc gtgcagatcc gtgaatcggg caaagcgccg gggatcctga tcgccaatga
     9001 gcaactggca aaacgctatc tggaactggg cgcgctgttt gtcgccgtcg gcgttgacac
     9061 caccctgctc gcccgcgccg ctgaagcgct ggcagcacgg tttggtgcgc aggccaccgc
     9121 cgtgaagccc ggcgtgtatt aatgccggat gcgctgcact tatccggcct acactcgcac
     9181 caaaccgtag gccggataag gcgtttacgc cgcatccggc aaaaagccgt accaaatcgc
     9241 ggaccggata aggcgttacg ccgcatccgc cataaacctt gtcgtaccct acaaaaatcc
     9301 cattagagga agaaaaatga gcgacacctc acctgccata ccggagagta tcgatccggc
     9361 gaatcagcat aaagcgctga ctgccggaca acaggcggtt attaagaagc tatttcgccg
     9421 cctgatcgtc tttctgttcg tgctgtttat cttctcgttc cttgatcgca tcaacatcgg
     9481 ctttgccgga ctcacgatgg gacgcgacct cggtctgagc gccaccatgt ttggcctcgc
     9541 taccaccctg ttctatgccg cttatgtcat cttcggcatt cccagcaaca ttatgctgag
     9601 tattgtcggt gcgcggcgct ggatcgccac catcatggtg ctctggggca tcgcctctac
     9661 tgccaccatg tttgccactg gccccaccag cttgtacgta ctgcgtatac tggttggcat
     9721 taccgaagcc ggctttctgc ctagtattct gctgtattta accttctggt ttccggccta
     9781 tttccgcgcc cgtgccaacg ccttgtttat ggtagcaatg ccggtaacga cagcgttggg
     9841 ctcgatcgtt tccggctaca ttttgtcgct ggattgcgtc atggcattaa aaggctggca
     9901 gtggctgttt ttgctggaag gcttcccgtc ggtattactc ggcgtcatgg tgtggttctg
     9961 gcttgatgac tcaccggaca aagctaagtg gctgacgaaa gaagacaaaa aatgcctgca
    10021 agagatgatg gataacgatc gtctgacgct ggttcagcca gagggagcca tcagccacca
    10081 cgccatgcaa caacgcagta tgtggcggga gatcttcact ccggtggtga tgatgtatac
    10141 cctggcgtat ttctgcctga ccaacacact tagtgcgatc agcatctgga caccgcagat
    10201 cctgcaaagt tttaatcagg gcagcagtaa tatcaccatc ggcctgctgg ccgccgtacc
    10261 gcagatttgt accattctcg ggatggtcta ctggagccgt cactcagatc gccgccagga
    10321 acgaaggcat cacaccgccc ttccttattt gttcgctgcc gcaggttggt tactggcttc
    10381 ggcaactgat cacaacatga tccagatgct ggggatcatt atggcttcga ccggatcatt
    10441 cagcgcaatg gcgattttct ggacaacacc ggatcagtcc atcagcctgc gggcacgagc
    10501 gatcggtatt gcggtgatca acgccactgg caacattggt tcagcgttaa gtccgtttat
    10561 gatcggctgg ttgaaagatt tgaccggcag ctttaacagt ggattgtggt ttgttgccgc
    10621 ctgctggtga ttggtgcggg gattatctgg gcgattccaa tgcagtcctc ccgtccgcga
    10681 gcgaccccgt aaggaacgac gatgtgtgac cgtcagattg ccaatattga tatcagcaaa
    10741 gagtacgatg aaagcctggg cacggacgat gtgcattatc agtcgttcgc ccgcatggcg
    10801 gcattttttg gccgccatat gctgccacat cgccacgaac agtactttca gatgcatttc
    10861 ctcaatagcg gacagattga gctacagctt gacgatcatc gctactcggt ggaagcgccc
    10921 ctgtttgtcc tgacgccgcc gtcagtacct catgcgttta ttacggagtc tgacgccgac
    10981 ggtcatgtgt tgacggtacg ggaagatctg atctgacccc tgctggaagt tctttatccg
    11041 ggcactcggg aaaccttcgg cctgccgggg gcctgtcact ggcagataaa cccgacgaac
    11101 tggcggcgct ggaacactat tggcaactga tagagcggga atcggtggaa caactgcctg
    11161 gacgggaaca caccctgacg ttactggcac aggcagtgtt caccctactg ctgcgtaacg
    11221 caaaactcga cgaccatgcc gccagcggga tgcgcggaga attaaaactg ttccagcgtt
    11281 ttaatatgct gattgaaagc cattttcatc agcactggac agtaccggat tacgctaacg
    11341 aactgcatat caccgaatca cgactcacgg acatctgccg tcgctttgcc aaccgtccgc
    11401 caaaacggtt gattttcgac aggcagctgc gagaagccaa gcggctgctg ctgttttctg
    11461 ataacgccgt gaacaatatt gcctggcaat aaggatccgg cttattttgc gcgctttttt
    11521 aatcgcttag tcggttgctc gcccagtgct tatcgcgcca aaaaagtacc tgtgacgtga
    11581 aaatccctta gccttaacgg gaaaccaggc accaccagct attccccttt ctccgcctgg
    11641 agcaagggga tttagtaacg tcaaaaatcg ctaaaagcga cctcgatcac aaaaccgtac
    11701 ccgacctgaa aagtaccagc cattgtccca aaagtctctt cccgtaatcg cccctgcaag
    11761 cttcaattga ataacaaaaa caacacacaa aattaacaat cgtattccga ttaatactgt
    11821 agaggtcgac atgaaaccag aagatttccg cgccagtacc caacgtccgt tcaccgggga
    11881 agagtatctg aaaagcctgc aggatggtcg cgagatctat atctatggcg agcgagtgaa
    11941 agacgtcact actcatccgg catttcgtaa tgcggcagcg tctgttgccc aactgtacga
    12001 cgcgctacac aaaccggaga tgcaggactc tctgtgctgg aacaccgaca ccggcagcgg
    12061 cggctatacc cataaattct tccgcgtggc gaaaagtgcc gacgacctgc gccagcaacg
    12121 cgatgccatc gctgagtggt cacgcctgag ctatggctgg atgggccgta ccccagacta
    12181 caaagctgct ttcggttgcg cactgggcgc gaatccgggc ttttacggtc agttcgagca
    12241 gaacgcccgt aactggtaca cccgtattca ggaaactggc ctctacttta accacgcgat
    12301 tgttaaccca ccgatcgatc gtcatttgcc gaccgataaa gtaaaagacg tttacatcaa
    12361 gctggaaaaa gagactgacg ccgggattat cgtcagcggt gcgaaagtgg ttgccaccaa
    12421 ctcggcgctg actcactaca acatgattgg cttcggctcg gcacaagtga tgggcgaaaa
    12481 cccggacttc gcactgatgt tcgttgcgcc aatggatgcc gatggcgtaa aattaatctc
    12541 ccgcgcctct tatgagatgg tcgcgggtgc taccggctcg ccatacgact acccgctctc
    12601 cagccgcttc gatgagaacg atgcgattct ggtgatggat aacgtgctga tcccatggga
    12661 aaacgtactg atctaccgcg atttcgatcg ctgccgtcgc tggacaatgg aaggcggttt
    12721 tgcccgtatg tatccgctgc aagcctgtgt gcgcctggca gtgaaattag acttcattac
    12781 agcactgctg aaaaaatcac tcgaatgtac cggcaccctg gagttccgtg gtgtacaggc
    12841 cgatctcggt gaagtggtgg cgtggcgcaa caccttctgg gcattgagtg actcgatgtg
    12901 ttctgaagcg acgccgtggg tcaacggggc ttatttaccg gatcatgccg cactgcaaac
    12961 ctatcgcgta ctggcaccaa tggcctacgc gaagatcaaa aacattatcg aacgcaacgt
    13021 taccagtggc ctgatctatc tcccttccag tgcccgtgac ctgaacaatc cgcagatcga
    13081 ccagtatctg gcgaagtatg tgcgcggttc gaatggtatg gatcacgtcc agcacatcaa
    13141 gatcctcaaa ctgatgtggg acgccattgg cagcgagttt ggtggtcgcc acgaactgta
    13201 tgaaatcaac tactccggta gccaggatga gattcgcctg cagtgtctgc gccaggcaca
    13261 aagctccggc aatatggaca agatgatggc gatggttgat cgctgcctgt cggaatacga
    13321 ccagaacggc tggactgtgc cgcacttgca caacaacgac gatatcaaca tgctggataa
    13381 gctgctgaaa taacgcagca ggaggttaag atgcaattag atgaacagcg cctgcgcttt
    13441 cgtgacgcga tggccagcct gtcggcagcg gtaaatatta tcaccaccga gggcgacgcc
    13501 ggacaatgcg ggattacggc aacggccgtc tgctcggtca cggatacacc accatcgctg
    13561 atggtgtgca ttaacgccaa cagtgcgatg aacccggttt ttcagggcaa cggtaagttg
    13621 tgcgtcaacg tcctcaacca tgagcaggaa ctgatggcac gccacttcgc gggcatgaca
    13681 ggcatggcga tggaagagcg ttttagcctc tcatgctggc aaaaaggtcc gctggcgcag
    13741 ccggtgctga aaggttcgct ggccagtctt gaaggtgaga tccgcgatgt gcaggcaatt
    13801 ggcacacatc tggtgtatct ggtggagatt aaaaacatca tcctcagtgc agaaggtcac
    13861 ggacttatct actttaaacg ccgtttccat ccagtgatgc tggaaatgga agctgcgatt
    13921 taagctccag ccccttcacg tattcgtcga aggggcattt ttattgtgat ctcaatcaca
    13981 tatccacccg atgaataatt cttgcccaac cgctcaccgc cattcctgac cgcttacgtc
    14041 cctaaaataa ccactcagtt atttacctta ctttacgcgc gcgtaactct ggcaacatca
    14101 ctgcaggata gcggtcaatt tacctcctca aacgcaacgc aaacctagaa cggcttcggc
    14161 ctatgattaa caaattactc tatgaatttt ggtttgcagg aaggcagcaa gtgagtgaat
    14221 ccccgggagc ttacaacagt aagtgacaga ggtgaacgaa cgcagctgcc gcacctgtaa
    14281 gccaaaagac gacgagtaaa atgccaggtt ttactatgga tacgaaaaaa ctattcaagc
    14341 acataccctg ggtgattctc ggaatcatcg gtgcattctg cctcgcggta gttgcattac
    14401 gtcgggggga gcacgtcagc gccctgtgga tcgtggtcgc ctctgtgtcg gtgtatctgg
    14461 tggcgtatcg ctactacagt ctgtacatcg cccagaaggt gatgaaactc gaccccacgc
    14521 gcgcgacgcc tgcggttatt aacaacgacg gtctgaacta cgttccgacc aaccgttacg
    14581 tgttgtttgg tcaccacttc gccgctatcg ctggtgccgg tccgctggtt ggtccggtgc
    14641 tcgccgcgca gatgggctac ctgcctggca cgctgtggct gctggcgggg gtagtactgg
    14701 ccggtgcggt tcaggacttt atggtgctgt ttatctcctc tcgccgtaac ggcgcatctc
    14761 tcggtgagat gatcaaagaa gagatgggac cagtaccggg gactatcgcg ctgtttggct
    14821 gtttcttaat catgatcatc atcctcgccg ttctggcgct gattgtggtt aaagccctgg
    14881 ccgaaagtcc gtggggtgtc ttcaccgttt gctcaaccgt accgattgcg ctgtttatgg
    14941 gtatctacat gcgctttatc cgtccggggc gtgtaggtga agtttctgtt attggtatcg
    15001 tgctgctggt tgcctctatc tatttcggtg gcgtgattgc tcacgatccg tactggggtc
    15061 cggcactgac ctttaaagac accaccatta ccttcgcgct gattggctat gcgtttgttt
    15121 ccgcactgct gccggtgtgg ctgatcctcg caccgcgcga ctatctggca accttcctga
    15181 aaatcggcgt tatcgtcggc ctggcgctgg gtatcgtggt actgaacccg gaactgaaaa
    15241 tgcctgcaat gacccagtac attgacggta ctggcccgct gtggaaaggc gctctgttcc
    15301 cgttcctgtt catcaccatc gcctgtggtg cggtatctgg cttccacgcg ctgatctctt
    15361 ccggtacgac gccgaaattg ctggctaacg aaaccgacgc gcgtttcatt ggctacggcg
    15421 caatgctgat ggaatccttc gtggcgatta tggcgctggt tgctgcgtcc atcatcgaac
    15481 cgggtcttta cttcgcgatg aataccccgc ctgctggcct tggcatcacc atgcctaacc
    15541 tgcatgaaat gggtggcgag aacgcgccga tcatcatggc gcagctgaaa gacgttaccg
    15601 cacacgcggc ggcgaccgtc agctcctggg gcttcgtgat ttcgccagag cagatcctgc
    15661 aaaccgcgaa agacattggt gagccttctg tcctgaaccg tgcaggtggc gcgccgacgc
    15721 tggcggtagg tatcgctcac gtgttccaca aagtgctgcc gatggctgac atgggcttct
    15781 ggtatcactt cggtattctg ttcgaagccc tgttcatcct gaccgcgctg gatgcgggta
    15841 ctcgttctgg ccgctttatg ctgcaagacc tgctgggtaa cttcatcccg ttcctgaaaa
    15901 aaaccgactc tctggttgcc ggtatcatcg gtactgcggg ctgtgtgggt ctgtggggct
    15961 acctgctgta tcagggcgtg gtcgatccgc tgggcggcgt taagagcctg tggccgctgt
    16021 tcggtatttc caaccagatg ctggcagccg tagcgctggt actgggcacc gttgtgctga
    16081 ttaagatgaa gcgcacccaa tacatctggg taactgttgt tccggctgta tggctgctta
    16141 tctgcaccac ctgggcgctg ggtctgaaac tgttcagcac caacccgcag atggaaggct
    16201 tcttctacat ggcaagccag tacaaagaga agattgctaa cggtactgac ctgacggcgc
    16261 agcagattgc caacatgaac cacatcgttg tgaacaacta caccaacgca ggcctgagta
    16321 ttctgttcct gattgtggtg tacagcatca tcttctacgg tttcaaaacc tggcttgcgg
    16381 tgcgtaacag cgacaaacgt actgacaaag aaactccgta cgttccaatc ccggaaggcg
    16441 gcgtgaagat ctcttcgcac cactaaccgg ttgccggatg cgctgcgcgt atccggccta
    16501 caaagtgtct atcgtaggcc ggataaggcg tttacgccgc atccggcaaa tccctagccc
    16561 ggaccttccg ggctttacgc atatctggaa ggcaaaatgt ttggtaactt aggacaggca
    16621 aaaaaatatc tcggccaggc ggcgaagatg ttgattggca ttccagacta cgacaactac
    16681 gtcgagcata tgaagaccaa ccatcccgac aagccgtaca tgagctatga agaattcttc
    16741 cgcgaacgcc agaacgcgcg ctacggcggc gatggtaaag gcggtatgcg ctgttgttaa
    16801 tggagagagc atgaacccga ttgcagttac cctactcacc ggttttttag gcgcgggcaa
    16861 aaccaccctg ctgcgccata ttcttaacga acaacacggc tacaagattg ccgtgattga
    16921 aaacgaattc ggcgaagtct ccgttgatga tcaactgatt ggcgaccgcg ccacgcagat
    16981 caaaacgctg accaacggct gcatctgctg ttcgcgctcc aacgagctgg aagacgcact
    17041 actcgacctg ctggataatc tcgacaaggg caatattcag ttcgaccgtc tggtcattga
    17101 atgcaccggc atggccgatc ccggcccgat tattcagacc ttcttctccc atgagatttt
    17161 atgccagcgc tacctgctgg acggggtgat tgcgctggtg gatgcggtac atgccgatga
    17221 gcagatgaac cagttcacca tcgcccagtc ccaggttggc tacgccgacc gtattctgct
    17281 gacgaaaacc gacatcgcag gcgaagcaga gaaactgcgt gaacgcctgg cgcgcatcaa
    17341 cgcccgcgca ccggtctaca ccgttaccca cggcgatatc gacctgggcc ttctgttcaa
    17401 caccaacggt tttatgctgg aagaaaacgt cgtcagcacc aaaccgcgtt tccactttat
    17461 cgcggacaaa caaaacgata tttcgtcgat tgtggtggaa ctggattacc cagtagatat
    17521 cagcgaagtt tcccgggtga tggaaaacct gctgctggaa tcggcggata aactgctgcg
    17581 ttacaaaggg atgctgtgga ttgacggcga acctaaccgc ctgctgttcc agggcgtcca
    17641 gcgcctctac agcgccgact gggaccgccc gtggggcgat gaaaaaccgc atagcacgat
    17701 ggtgtttatc gggattcagt tgccggagga tgagattcgg gcggcgtttg cgggactcaa
    17761 aaagtaacca gccctccaac atcacaatac ctgagacttt atcaccctca tattcctcca
    17821 gaatatgagg gcattcgggc ttaattatct ctgaacgtgc aacacttcct gcgactcctt
    17881 atgcgcctcc acatcctgct tcgttaacca gagcgactta cgaccaaaat tttcgtacat
    17941 tttcagctga tcttcatagt gctgatcaac tgttccatcg ggagcaataa acccactctg
    18001 accgggtgcg accacatccc aggcaagcac cggacgatcg cttgtcgttg gtgagaaaac
    18061 aatcatatcg ttttctgttc cacggttttg atactccgcc tgatgacgcg tttcttccgc
    18121 tgcggcctgc ggtacaccaa agaaattatt tgcccggaac gttaaggcca ttgcaggtgt
    18181 tttccagtta ctcacattat tgccatagcg tttggaaaga gtctcccagg tatcttccag
    18241 cgcagccaac acaacctcct gctgtggttt cccagcaaac agatcaaccg cctgtgggat
    18301 tggtgatttg tctccctgca ccgcctcata caaaattttt gctccaacac ttatattcag
    18361 cgaaccagtt gggccgtcct gggttgtttc gtagccactg gcgctgtacc acttatcaaa
    18421 tggcataggt acggcagcca ctacggtacg cttcaacata ctggtcagcc aaacgttcag
    18481 gatggcagag cctggctgct gccaggtttt accatcatca ttaagcaaat tgatgccatc
    18541 ccaacgtgtt aatgtatcca ccaactgacg gcgcggatcg ctctgtgtca aaccagatgt
    18601 cgctgcttgc agagtaggta aaaaaagcct caggttaaga tcctgacgac tggtttggcg
    18661 aataacatcc catgcctgat cagcagttaa gcgtggcttt tgctcaagca gtcggtcgat
    18721 ctccgtaacg cgatct
//
LOCUS       DADMHC010000065        18197 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.065, whole genome shotgun sequence.
ACCESSION   DADMHC010000065 DADMHC010000000
VERSION     DADMHC010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 18197)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18197)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18197
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.065"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..748)
                     /gene="mak"
                     /locus_tag="JNZ57_001903"
     CDS             complement(<1..748)
                     /gene="mak"
                     /locus_tag="JNZ57_001903"
                     /EC_number="2.7.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414928.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructokinase"
                     /protein_id="HAY8828136.1"
                     /translation="MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIA
                     TLVDMAEQATGQRGTVGMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRL
                     ANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFNGRAHISGNGTAGEWGHNPL
                     PWMDEDELRYREEVPCYCGKQGCIETFISGTGFAMDYRRLSGHALKGSEIIRLVEESD
                     PVAELALRRYELRLAKSLAHVVNILDPDVIV"
     gene            873..1784
                     /gene="rdgC"
                     /locus_tag="JNZ57_001904"
     CDS             873..1784
                     /gene="rdgC"
                     /locus_tag="JNZ57_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HAY8828137.1"
                     /translation="MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMG
                     WVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKT
                     EKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGS
                     LPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEE
                     ITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFD
                     ADFILMTGELAALIQNLIEGLGGEAQR"
     gene            complement(1862..1945)
                     /locus_tag="JNZ57_001905"
     CDS             complement(1862..1945)
                     /locus_tag="JNZ57_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828138.1"
                     /translation="MTQRPWSKLQHKTHNIAALKIIVRRSE"
     gene            complement(1942..2283)
                     /locus_tag="JNZ57_001906"
                     /pseudo
     CDS             complement(1942..2283)
                     /locus_tag="JNZ57_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308469.2"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2773 domain-containing protein"
     gene            complement(2431..2715)
                     /gene="ppnP"
                     /locus_tag="JNZ57_001907"
     CDS             complement(2431..2715)
                     /gene="ppnP"
                     /locus_tag="JNZ57_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine/purine nucleoside phosphorylase"
                     /protein_id="HAY8828139.1"
                     /translation="MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEE
                     MTVISGALNVLLPDATDWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL"
     gene            complement(2787..3464)
                     /locus_tag="JNZ57_001908"
     CDS             complement(2787..3464)
                     /locus_tag="JNZ57_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AroM family protein"
                     /protein_id="HAY8828140.1"
                     /translation="MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREE
                     VMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANI
                     SSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEEMLPVQAQKWQILQKSPVFSL
                     GNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFHQRHRDLLQKQLDVPVLLSNVLIAR
                     LAAELLV"
     gene            complement(3722..3913)
                     /gene="yaiA"
                     /locus_tag="JNZ57_001909"
     CDS             complement(3722..3913)
                     /gene="yaiA"
                     /locus_tag="JNZ57_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YaiA"
                     /protein_id="HAY8828141.1"
                     /translation="MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEH
                     PTAQEAMDAKKRYEDPDKE"
     gene            complement(3963..4487)
                     /gene="aroL"
                     /locus_tag="JNZ57_001910"
     CDS             complement(3963..4487)
                     /gene="aroL"
                     /locus_tag="JNZ57_001910"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706276.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroL"
                     /protein_id="HAY8828142.1"
                     /translation="MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT
                     VAEIVEREEWAGFRARETAALEAVTAASTVIATGGGIILTEFNRHFMQNNGIVVYLCA
                     PVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQV
                     ISEIRSALAQTINC"
     gene            complement(4670..5128)
                     /locus_tag="JNZ57_001911"
     CDS             complement(4670..5128)
                     /locus_tag="JNZ57_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414921.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HAY8828143.1"
                     /translation="MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRF
                     IRTLHVAAGFDVADNEIVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATI
                     RERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG"
     gene            5248..6057
                     /gene="proC"
                     /locus_tag="JNZ57_001912"
     CDS             5248..6057
                     /gene="proC"
                     /locus_tag="JNZ57_001912"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HAY8828144.1"
                     /translation="MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPNKVAA
                     LHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAASVTL
                     DQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVI
                     AEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLET
                     GEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCMEKSEKLSKS"
     gene            complement(6074..7174)
                     /gene="adrA"
                     /locus_tag="JNZ57_001913"
                     /gene_synonym="dgcC"
     CDS             complement(6074..7174)
                     /gene="adrA"
                     /locus_tag="JNZ57_001913"
                     /gene_synonym="dgcC"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase AdrA"
                     /protein_id="HAY8828145.1"
                     /translation="MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLP
                     RAVGLAGMFLPIASTLVSHPPPGWWWLVLVWPHLAWQIASRAVDPLSREIYNLKTDAV
                     LAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITV
                     SFNSAPLEWWLSLPIIVVYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRH
                     WETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRG
                     SDVIGRFGGDEFAVIMSGTPAESAIAAMLRVREGLNTLRLPNTPQVTLRISVGVAPLN
                     PQMSHYREWLKSADLALYKAKKAGRNRTEVAA"
     gene            complement(7276..7596)
                     /gene="psiF"
                     /locus_tag="JNZ57_001914"
     CDS             complement(7276..7596)
                     /gene="psiF"
                     /locus_tag="JNZ57_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate starvation-inducible protein PsiF"
                     /protein_id="HAY8828146.1"
                     /translation="MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQA
                     LKGDARKTYMSDCLKNSKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACL
                     KKAA"
     gene            complement(7715..9130)
                     /gene="phoA"
                     /locus_tag="JNZ57_001915"
     CDS             complement(7715..9130)
                     /gene="phoA"
                     /locus_tag="JNZ57_001915"
                     /EC_number="3.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414917.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HAY8828147.1"
                     /translation="MKQSTIALALLPLLFTPVTKARTPEMPVLENRAAQGDITAPGGA
                     RRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPL
                     TGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKA
                     AGLATGNVSTAELQDATPAALVAHVTSRKYYGPSATSEKCPGNALEKGGKGSITEQLL
                     NARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNAVTEANQQKP
                     LLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSK
                     NEKGFFLQVEGASIDKQDHAANPCGQSGETVDLDEAVQRALEFAKKDGNTLVIVTADH
                     AHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAAN
                     VVGLTDQTDLFYTMKAALGLK"
     gene            complement(9231..9491)
                     /gene="iraP"
                     /locus_tag="JNZ57_001916"
     CDS             complement(9231..9491)
                     /gene="iraP"
                     /locus_tag="JNZ57_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraP"
                     /protein_id="HAY8828148.1"
                     /translation="MKNLIAELLLKLAQKEEESKELCAQVEALEIIVTAMLRNMAQND
                     QQRLIEQVDGALYEVKPDASIPDDDTELLRNYVKKLLKHPRQ"
     gene            complement(9718..9875)
                     /locus_tag="JNZ57_001917"
                     /pseudo
     CDS             complement(9718..9875)
                     /locus_tag="JNZ57_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439229.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            9953..11047
                     /gene="ddlA"
                     /locus_tag="JNZ57_001918"
     CDS             9953..11047
                     /gene="ddlA"
                     /locus_tag="JNZ57_001918"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HAY8828149.1"
                     /translation="MEKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGID
                     KQGQWHVSDASNYLLNADDPAHIALRPSATSLAQVPSKHEHQLIDAQNGQPLPTVDVI
                     FPIVHGTLGEDGSLQGMLRVANLPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFIT
                     LTRANRHNISFAEVESKLGLPLFVKPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKV
                     IVEQGIKGREIECAVLGNDNPQASTCGEIVLTSDFYAYDTKYIDEDGAKVVVPAAIAP
                     EINDKIRAIAVQAYQTLGCAGMARVDVFLTPENEVVINEINTLPGFTNISMYPKLWQA
                     SGLGYTDLITRLIELALERHAADNALKTTM"
     gene            complement(11071..11283)
                     /locus_tag="JNZ57_001919"
     CDS             complement(11071..11283)
                     /locus_tag="JNZ57_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414914.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2754 domain-containing protein"
                     /protein_id="HAY8828150.1"
                     /translation="MNLPVKIRRDWHYYAFAIGLIFILNGVVGLLGFEAKGWQTYAVG
                     LVTWVISFWLAGLIIRRRDEETENAQ"
     gene            11543..11851
                     /locus_tag="JNZ57_001920"
     CDS             11543..11851
                     /locus_tag="JNZ57_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2755 family protein"
                     /protein_id="HAY8828151.1"
                     /translation="MADFTLSKSLFSGKYRNASSTPGNIAYALFVLFCFWAGAQLLNL
                     LVHAPGVYERLMQVQETGRPRVEIGLGVGTIFGLIPFLVGCLIFAVVALWLHWRHRRQ
                     "
     gene            complement(11910..13004)
                     /gene="yaiW"
                     /locus_tag="JNZ57_001921"
     CDS             complement(11910..13004)
                     /gene="yaiW"
                     /locus_tag="JNZ57_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface-exposed outer membrane lipoprotein YaiW"
                     /protein_id="HAY8828152.1"
                     /translation="MSRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQ
                     KMPASVKDRDAWAKYLATTFESQGLAPTLENVCSVLAVAQQESNYQADPAVPGLSKIA
                     WQEIDRRAERMHIPAFLVHTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPM
                     GQTLFVSLNPVRTGGPMQVSIAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLL
                     NYPASYSAPIYRFADFNAGWYASRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTE
                     LATRKLAGKLGMSDSEIRRQLEKGDSFSFEETALYKKVYQLAEAKTGKSLPREMLPGI
                     QLESPKITRNLTTAWFAKRVDERRARCMKQ"
     gene            complement(13017..14237)
                     /gene="sbmA"
                     /locus_tag="JNZ57_001922"
     CDS             complement(13017..14237)
                     /gene="sbmA"
                     /locus_tag="JNZ57_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706191.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide antibiotic transporter SbmA"
                     /protein_id="HAY8828153.1"
                     /translation="MFKSFFPKPGAFFLSAFVWALIAVIFWQAGGGDWVARITGASGQ
                     IPISAARFWSLDFLIFYAYYIVCVGLFAFFWFIYSPHRWQYWSILGTALIIFVTWFLV
                     EVGVAVNAWYAPFYDLIQTALSSPHKVTIEQFYREVGVFLGIALIAVVISVLNNFFVS
                     HYVFRWRTAMNEYYMANWQQLRHIEGAAQRVQEDTMRFASTLENMGVSFINAIMTLVA
                     FLPVLVTLSAHVPELPIIGHIPYGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRVE
                     AAYRKELVYGEDDATRATPPTVRELFSAVRKNYFRLYFHYMYFNIARILYLQVDNVFG
                     LFLLFPSIVAGTITLGLMTQITNVFGQVRGAFQYLINSWTTLVELMSIYKRLRSFEHE
                     LDGDKIQEVTHTLS"
     gene            14589..15746
                     /gene="ampH"
                     /locus_tag="JNZ57_001923"
     CDS             14589..15746
                     /gene="ampH"
                     /locus_tag="JNZ57_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine-
                     carboxypeptidase/endopeptidase AmpH"
                     /protein_id="HAY8828154.1"
                     /translation="MKRSLLFSAVLCAASLTSVHAAQPITEPEFASDIVDRYADHIFY
                     GSGATGMALVVIDGNQRVFRSYGETRPGNNVRPQLDSVVRIASLTKLMTSEMLVKLLD
                     QGTVKLNDPLSKYAPPGARVPTYNGTPITLVNLATHTSALPREQPGGAAHRPVFVWPT
                     REQRWKYLSTAKLKAAPGSQAAYSNLAFDLLADALANASGKPYTQLFEEQITRPLGMK
                     DTTYTPSPDQCRRLMVAERGASPCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYQR
                     SNQADRMQTLIYQRAQFTKVIGMDVPGKADALGLGWVYMASKEGRPGIIQKTGGGGGF
                     ITYMAMIPQKNIGAFVVVTRSPLTRFKNMSDGINDLVTELSGNKPLVIPAS"
     gene            complement(15747..16370)
                     /gene="iprA"
                     /locus_tag="JNZ57_001924"
     CDS             complement(15747..16370)
                     /gene="iprA"
                     /locus_tag="JNZ57_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414909.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogen peroxide resistance inhibitor IprA"
                     /protein_id="HAY8828155.1"
                     /translation="MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNSEDT
                     FVILEGVISLRREENVLIGITQASYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQT
                     ITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRI
                     GVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY"
     gene            complement(16458..>18197)
                     /locus_tag="JNZ57_001925"
     CDS             complement(16458..>18197)
                     /locus_tag="JNZ57_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000556401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HAY8828156.1"
                     /translation="TSGRIIDNKVFQSGVFNVTLNNSSEWNTVNSSVIDTLAVNNGSQ
                     VNVTDSSLVSDTISLTNGSSLNIGANGVVATDHLTVDSYSTVNLTESTGWNNYSNLYT
                     NTITVTNGGVLDVNVDQFDTEAFRTDKLELTSGNIADHNGNVISGVFDINSSDYVLNA
                     DLVNDRTWDTSKSNYGYGIVAMNSDGHLTINGNGDVDNGTELDNSSVDNVVAATGNYK
                     VRIDNATGAGTIADYKDKELIRVNDANTNATFSAANKADLGAYTYQAEQRGNTVVLQQ
                     MELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGLADNGGAWVSYFGGNFNGDN
                     GTINYDQDVNGIMVGVDTKIDGNNAKWIVGAAAGFAKGDMNDRSGQVDQDSQTAYIYS
                     SAHFANNVFVDGSLSYSHFNNDLSATMSNGTYVDGSTNSDAWGFGLKAGYDFKLGDAG
                     YVTPYGSVSGLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYF
                     KLAYVYDDSNNDNDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVD
                     QDWSANVGVKYTW"
BASE COUNT         4567 a         4685 c         4341 g         4604 t
ORIGIN      
        1 ggacaatcac atccggatcg agaatattca cgacatgtgc cagcgatttt gccagccgca
       61 gctcgtagcg acgcaatgcc agttccgcta ccggatcgct ttcttcaacc aggcggataa
      121 tttcactgcc tttcagcgca tgtccgctca aacgacgata atccatcgcg aatcccgtgc
      181 ccgaaataaa ggtttcaata caaccttgtt taccgcaata acaagggact tcctcgcgat
      241 aacgcagttc gtcttcgtcc atccacggta gcggattgtg tccccactca cctgccgtgc
      301 cattgccgct gatatgcgcc cgcccattga atgccacgcc cgcgccgcat cccgtgccga
      361 taatcacggc aaataccgtc tgcgctcccg ctgccgcgcc atctactgct tctgaaaccg
      421 ccagacagtt agcgtcattt gccagccgca cttcccgctg caacctcgcg cttaagtctt
      481 tatcgaatgg ctgaccgttg agccaggttg aattggcatt cttcaccaca ccggtgtaag
      541 gcgaaattga gccaggaatg cccataccta ccgttccgcg ctgccccgtc gcctgctccg
      601 ccatatcaac caacgtggcg atcgtttcaa tagtctgccg gtaatcatca cgcggcgtgg
      661 gcagacgatg gcggtacaac tgctcccctg catcgcccag tgcaatcact tcagttttgg
      721 tgccgcctaa atcgatacct atacgcacgg tactctcctt atttttttca atatcaatag
      781 cgtagagacg gacaaccgga ttggcaatgc aaggccgccg acaattcgtt atcatgcccg
      841 ctaaatttaa caacaaggcc gtggaaatta tcatgctgtg gttcaaaaat ttaatggttt
      901 accgtcttag ccgcgagatt tcgctgcgtg cagaagagat ggaaaaacag ctagcctcga
      961 tggcatttac cccatgcggc agccaggaca tggcgaagat gggctgggtt cctccgatgg
     1021 gatcgcacag cgatgcgtta acgcacgttg ccaatggtca aattgttatc tgcgcgcgca
     1081 aagaagaaaa aatcctcccg tctccggtga ttaagcaggc gctggaagcg aaaatcgcca
     1141 aactggaagc ggaacaggcg cgtaagctga agaaaaccga aaaagattcg ctgaaagacg
     1201 aagtgctgca ctctctgttg ccgcgtgctt tcagccgttt tagccagaca atgatgtgga
     1261 tcgacacggt taacggtttg attatggtgg actgcgccag tgccaaaaaa gcggaagata
     1321 cgctggcact gctgcgtaaa agcctggggt cgttacctgt ggtaccattg agcatggaaa
     1381 acccgattga actgacgctg accgaatggg ttcgctccgg tagcgcggca cagggcttcc
     1441 agctgcttga tgaagccgag ctgaaatcgt tgctggaaga tggcggcgtg atccgcgcga
     1501 agaaacaaga tctgaccagc gaagagatca ccaatcacat cgaagccgga aaagtggtga
     1561 ctaaactggc gctcgactgg cagcagcgca ttcagtttgt gatgtgcgac gatggttcgc
     1621 tcaagcgtct gaagttttgc gacgagctgc gcgatcaaaa cgaagatatc gaccgtgaag
     1681 atttcgccca gcgttttgat gccgatttca tcctgatgac tggtgaactg gcagcgttaa
     1741 ttcaaaacct gattgaagga ttaggtggcg aagcacaacg ttaattgctg attttccttt
     1801 aatgccggat gcgacgcctg ccgcgtctta tccggcgtac gaagccacac cagggatata
     1861 attattcgct acggcggaca ataattttta gcgcagcaat attatgcgtt ttatgctgta
     1921 acttgctcca tggacgttgt gtcattgttt ttcctcaagc cagtgacgcg cttcactgcg
     1981 aattttccgc attgccccgg ttttcactaa atcccgtaac agcgaaagat cgggttgttc
     2041 gacaaataag agtaatgatg gatcctcttt taaccacgtc gttttcacat cggcagcgag
     2101 ctgtggatta ttcatagcta gcgaccgatg ccgagactcg gtcaatgtcg ttaacaacga
     2161 cgccggggta tgtgcgttgc gtaatgccgt ttggcgcaaa tgatcattgc gactttgcag
     2221 caatgcacgc caccattcat catcttattt atcttttatc gtagccagtt ccgcaacaat
     2281 atctggagat cttcactgat atttatatca accttgatga attatgaata tatcggaaat
     2341 tgaaaaaatc gcagcaaagg aaatattatt atgggttaaa gagaggatat ttcagaaaaa
     2401 tgccctcccg ttcaagggga aggcgaggaa ttacagatag cggcacagat aagaggtggg
     2461 ttcggcaact tgcagatgaa actcactgtg accgggaaca ttaaacaccg aaccggcttc
     2521 atacacctgc cagtcggtcg catcaggcag taacacattc agcgcgccac tgattaccgt
     2581 catctcttcc ggctcagcgg tgctgaaggt gtattcgcct tcaaccataa cacccacgct
     2641 ggcgcgacca gtgctgctgc tggaaaagcc gattgatttc actttgccgg aaaagtactc
     2701 attactttga agcataaact ggccctgtct ggtagttgaa catctacttc actatagggg
     2761 ccagaggcgc tggctgtcac gcaaaattac accagtaatt ccgcagccag ccgtgcaatc
     2821 aatacgttag acagcaagac aggaacatcg agctgttttt gcagtaaatc gcgatgacgt
     2881 tggtgaaatc ctaaacaatc cagcatgatg acatcagccc cttttgccag taattctttc
     2941 ccggcatcaa tgattttttg ttctgaatca tgaatggggt tacccaatga aaataccggc
     3001 gatttctgca aaatttgcca tttttgcgcc tgaacgggca gcatctcctc aaccggaacg
     3061 ataaccccca cctgatgatc ttcaacaata gaggaaacca gtggaggcaa tattcgcgac
     3121 ggctcaagaa agatcgtatt acgcgcagtc atactactaa tgtttgctgt actcattaat
     3181 aaaatgacgt cataaccctg attatcgagc acttcaacca caccttgcag gtctcgctcc
     3241 actttacgac gcgaaacatg ggccagctgg ttgtcattta ataatgtgag aatggtgtct
     3301 tcgcctgctt ctggcgcgta ctccgccatc acttcttcac gacttaactt ccccagcagg
     3361 ctatgatggg aaatattatc ttcgtcaatg tattccgtca gaagcggcaa aacctcctgc
     3421 ataggtacaa tgccgatggt caggatcgcc aacgacgcac tcattgttca tccaccttac
     3481 ttttctttcg tcgttaatta ccgggcaagt gtgaagcacc actgctgaca cttacttgtg
     3541 ctacaaatga caaaaagcgt agcagcagac gtgcacggca taatgtaaag attccaaatg
     3601 attccagtaa tggattgtta ttgtttaata ttctaattat tagaaaaaca tgaattatga
     3661 aaaatgtgac gcagatccct tgtagtggca ctcagaatcc cttccgagca gtctgatgcg
     3721 gtcactcttt gtcagggtcc tcatagcgtt ttttcgcatc catcgcttcc tgagcggtcg
     3781 gatgttcact gatcaacgag tctggtttag gatgatcggc tctgagttgg taccaggtta
     3841 ccgtctgtcc tggctttcct ttttcaatcg tcactatata tgcttcacga ggataaggcg
     3901 gtttcgttgg catcgttctt ccttatttca cggaatgaac gttaagtata ggcgctctaa
     3961 aatcaacaat tgatcgtctg tgccagggcg ctacgaattt cagaaatcac ctggctgggt
     4021 tcgtttgttg cgtcgatgat aatatgcgca acttcgcgat atagcgcatc gcgttcttcc
     4081 agcacttcct gaacttcttc gctcagcggt tttcccgtta aggttggccg taaatcttct
     4141 tccggtgcag cttgcagtcg gttaaccagg actgatactg gcgcacacaa ataaaccacg
     4201 atcccgttat tttgcatgaa gtgacgatta aattccgtca gaataatgcc gccgcctgta
     4261 gcgataacgg tggatgccgc agttaccgct tccagcgccg ccgtttctct ggcgcgaaat
     4321 cccgcccact cttccctttc gacgatctcc gcgaccgtca tattgagctg tgattgcaac
     4381 cactgatcgg tatcgacaaa ccgacggtta agcgaatcgg caagggccat tccgaccgtt
     4441 gttttaccac agccccgagg cccgatcaga aaaagaggtt gtgtcatcgt gggttttccc
     4501 caataggtcg caatgcggcg aaagccggtg tcatgagaat agcgaacatt ccatcaaact
     4561 agtacaattt cgattgtaaa gaaaaaattc cacttaaagt gaaaatctca atacatccct
     4621 tactatacca ataaatattc aagaatgaag tgtaaataat aaattacatt tagccacgac
     4681 tacgttgcac ttccagccac cacttctcca gctccgcggc aaaggcctgg cggtcacgtt
     4741 gtgaaaggct atctggtccg ccggtctgga tcccactggc acgtaaggta tccataaaat
     4801 cgcgcatcgt caggcgctca cgaatggtcg ctggcgtgta acgttcgccg cgcggattaa
     4861 gcgccgctgc gcctttctcg atggcttcag cagccaaagg tatatctgcg gtgatcacca
     4921 aatcgcccgc ttcacactgc cggacaattt cgttatcggc aacgtcgaaa cctgccgcga
     4981 cgtgcagcgt acgaataaat cgcgatggcg gcacgcgtaa actctggttt gctaccagta
     5041 ccagcggcat ctgcatacgt tccgccgcgc gatacaaaat ctctttaatt acattgggac
     5101 acgcgtcggc atccacccaa attgtcataa agtcatcctt tgttgggtaa tcctctattg
     5161 tgtcgcgctt ttgccttccg gcatagttct gtttatgctt ctgccagcga ttatcaaaac
     5221 aatgaatttc acggcaggag tgaggcaatg gaaaagaaaa tcggttttat tggctgcggc
     5281 aatatgggaa aagccattct cggcggtctg attgccagcg gtcaggtgct tccagggcaa
     5341 atctgggtat acaccccctc cccgaataaa gtcgccgccc tgcatgacca gttcggcatc
     5401 aacgccgcag aatcggcgca agaagtggcg caaatcgccg acatcatttt tgctgccgtt
     5461 aaacctggca tcatgattaa agtgcttagc gaaatcacct ccagcctgaa taaagactct
     5521 ctggtcgttt ctattgctgc aagtgtcacg ctcgaccagc ttgcccgcgc gctgggccat
     5581 gaccggaaaa ttatccgcgc catgccgaac actcccgcgc tggttaatgc cgggatgacc
     5641 tccgtaacgc caaacgcgct ggtaacccca gaagataccg ctgatgtgct gaatattttc
     5701 cgctgctttg gcgaagcgga agtaattgct gagccgatga tccacccggt agtcggtgtg
     5761 agcggttctt cgccagccta cgtatttatg tttatcgaag cgatggccga cgccgccgtg
     5821 ctgggcggga tgccacgcgc ccaggcgtat aaatttgccg ctcaggcggt aatgggttcc
     5881 gcaaaaatgg tgctggaaac gggagaacat ccgggggcac tgaaagatat ggtctgctca
     5941 ccgggaggca ccaccattga agcggtacgc gtactggaag agaaaggctt ccgtgccgca
     6001 gtgatcgaag cgatgacgaa gtgtatggaa aaatcagaaa aactcagcaa atcctgatga
     6061 ctttcgccgg acgtcaggcc gccacttcgg tgcggttacg tccggctttc tttgctttgt
     6121 aaagcgccaa atctgccgat ttcaaccact cacgatagtg actcatttgt gggttcagcg
     6181 gcgcaacccc cacactaatc cgtaaagtta cctgtggcgt attcggcaag cgtaacgtgt
     6241 ttagcccttc acgcacccgt aacatggcgg caatggcgct ctcagctggc gtaccggaca
     6301 tgattactgc aaactcatcg ccgccaaacc gaccaatcac atcgctaccg cgcagggtaa
     6361 tttgtaactg tcgggtaagc gccacaatcg cttcatcgcc cacatcatga ccccaggtat
     6421 cgttgatgct cttgaaatgg tcgatatcga taatcagtaa cgttgcatcg cgattatgcc
     6481 gccgacagtt atcaaattca ttgcgtaaca tagtttccca atgacgtcgg ttatacacgc
     6541 ccgtcatgcc gtcgcgggta ctcatgacct gcaacctgcg tttatgttcc gccagtttgg
     6601 ttgccgtctg gtagctgacc cagccaaaca gcagaggata aacgacaata atgggaaggg
     6661 agagccacca ttccagcggc gcactattga acgacacggt aatgcccgta agctcgaggg
     6721 tgacaaggca ggaaaccacc atcaacacca gacccgcgac aaacagacgg gggccgcctg
     6781 cccccatcaa attcagacac ataatcatca acatagcggt ggaaggcagc acgtttacgc
     6841 ccattacgcc tacccacatt cccgctaata ctgcatcggt ttttaagttg taaatttccc
     6901 ggctaagcgg atcgacggcc ctgctcgcta tctgccaggc taaatgcggc cagaccaaca
     6961 ccagccacca ccagcccggc ggcgggtgcg aaaccagcgt tgaagcaatc ggtaagaaca
     7021 tgccagccag gccaaccgca cggggtagtc tgacgcgacg ggcgaagcgc agcccggacc
     7081 gctgatgttc gttttgagga gttaaaggag gttcctcccc atgcgccgcc gcttttttga
     7141 aaaagttttc atcattcatt atttttggga acattcagaa acaattttcc caaattatag
     7201 agacggggct aaaggcagaa gtatgaaatt tcgggtgagc cactttcgta gctcacccgt
     7261 tagcactatc aggtatcagg cggctttctt gaggcaggca ctcataaact tattacgatc
     7321 atcacctttc agagattgtt gtgttgcttg attattacat tcgcgcatct tttgctgctg
     7381 tggcgtcaaa cttttttcac caggcgcaga cttgctgttc ttcaggcaat cactcatgta
     7441 ggtcttacga gcatcccctt tcaacgcctg cgccgtcgcc tgctgattac aggaggtcat
     7501 acgctgttgt tgtggggtta acgttctctc ggcagcgccg actgtggtta aaaaaaccag
     7561 accgaaaagc aaggtaacca gtaatgtaat tttcatagca ccatccctct tcatgtttta
     7621 accatgagcg tatgcgcccg agatttgcca ttaagtctgg ttgctaacag caaaaaaacc
     7681 acccggcagc gaaaattcac tgccgggcgc ggttttattt cagccccagg gcggctttca
     7741 tggtgtagaa gagatcggtc tggtcggtca gtccaacgac attggcggca tgcgggccat
     7801 acgccgcaat acgcaactga ctgccggtat gttcttgtga atcctcttcg gagttcccgt
     7861 agctcatcac catcactgcg ccatctttgg tatttagcgc ctgggtgagg cccggagctt
     7921 tggtatccgg cgcgacaatc tggctggcgt gggcgtgatc agcggtgact atgaccagcg
     7981 tgttgccatc ctttttagcg aattccagcg cccgttgtac ggcttcatcg agatcgaccg
     8041 tctcgccact ttgcccacaa ggattcgcag cgtgatcctg tttatcgatt gacgcacctt
     8101 caacttgcag gaaaaatcct ttctcatttt tactcaacaa ttcaatggct ttgtcggtca
     8161 tctgcgccag ggttggtaca ctgtcattac gttgcggatt aggcgtacag gtgactgcgg
     8221 gcttatcgat attgccgtgg tacgttgctt tcggtcctag ccagcgcact ggcatattgc
     8281 cgtcagcaaa cagtccaagc agaggttttt gctgattcgc ttccgtcacc gcatttagcg
     8341 aggcggcatc gctgaccaac tgataaccac gcgcctgtgc ctgttcacgc agcgtttttc
     8401 cctgccattc accggcggtt gccgtttcag caaaggtttt tgcgccaccg ccaagcgtaa
     8461 cgtcggcacg agcattaagc agctgttcgg taatcgatcc ttttccgcct ttttccagag
     8521 cgttacccgg acatttttca ctggtcgcgc tcggaccgta gtatttgcgc gaagtcacat
     8581 gtgccaccag cgcagcgggc gtggcatcct gcaactctgc ggtagaaacg ttaccggtcg
     8641 ccagacctgc ggcttttgcc atttccagaa tcgttgggtg atctttttcg tgaatatcga
     8701 cgcccagcgc gccgttatag gttttgacac cggttgacca ggcggttgct gatgcagccg
     8761 aatcggtgac gtagtccggt ttgccggttt ttttattcag cgcatagtga gtgtattgcc
     8821 cggtaagcgg taaggcatcg atacctttaa aaaagccgcc cgcaccttcg gcataattac
     8881 gtgcggctgt aatttccgaa tcccccatcc catcgccaat cagcaaaata atattttttg
     8941 caggtttatc gctaagagaa tcacgcagag cggcagtctg atcacccgtt aaacggcgag
     9001 caccgccggg tgcagtaata tcgccctgag cagcccggtt ttccagaaca ggcatttctg
     9061 gtgtccgggc ttttgtcaca ggggtaaaca gtaacggtaa gagtgccagt gcaatagtgc
     9121 tttgtttcac tttattttct ccatgtacaa atacattaaa aaataaaaac aaagcgacta
     9181 taagtctcgg ccgtgacaac tttatgacag ctgttgaaaa gattaacttt ttactgacga
     9241 ggatgcttca ataacttctt tacataattg cgcagcagct ccgtatcgtc gtcaggaatg
     9301 ctggcatcag gctttacctc gtaaagagcc ccatccacct gttcaatcaa gcgctgttgg
     9361 tcattttgtg ccatattgcg aagcattgca gtgacgataa tctccaaagc ttctacctgc
     9421 gcgcacagtt ctttcgactc ttcttctttt tgggcaagct ttaataacaa ctcagcaatg
     9481 agatttttca tgtctgtatt tccttatcca acgtatggag aagttaacat tatgtttcac
     9541 aacttcatag tgtctggaag tattattttt atgacaaagg aaatactttg cgcaaatgtt
     9601 ctttgtttga ttaccagcga aacgtttctc atatttaaat aattaaccac acaaagaaca
     9661 ggcctttaat tatcaacctt tattataaac aaaagttatg aaatatattc tctgcgttta
     9721 cttacaacta agagaaaaaa ctcaccgcat ggccatttaa gccaggaata aattagcttc
     9781 ccgttcatca tttttgtgat ctcgcgcaca tctttgtgat aacgcacttt cttcaccatt
     9841 acgttgcacg ctttgtcagc agaagattgc aacattctgt cagaaggccg cgaatccccc
     9901 gttttgtcgt ggtaatgtat gcactttgtg ttagacggga taggttttta agatggaaaa
     9961 actgcgggta ggaatcgttt ttggtggtaa atcagcggaa catgaagtgt ctctgcaatc
    10021 ggcaaaaaac attgtcgatg ccattgataa aagtcgcttc gacgttgtgc tgctgggcat
    10081 tgataaacaa gggcaatggc acgtcagcga tgccagcaat tatctgctaa atgcagacga
    10141 tcctgcccat attgcgttgc gcccttcggc gactagcctt gcgcaggtgc caagtaaaca
    10201 tgagcatcag cttatcgacg cgcaaaacgg tcagccgtta ccgacggtgg atgtcatttt
    10261 cccgattgtc cacggtacgc tgggcgaaga tggttccttg cagggaatgc tgcgggtcgc
    10321 caatttaccg tttgtaggtt ctgatgttct ggcttcagca gcctgtatgg ataaagatgt
    10381 taccaaacgt ctgctgcgcg atgccgggct gaacattgcg ccatttatta ccctgacgcg
    10441 cgccaatcgt cacaacatta gttttgccga agtggagtct aaactggggt taccactgtt
    10501 tgtaaaaccg gctaatcagg gctcttctgt tggtgtcagc aaagtaacca gtgaagaaca
    10561 gtacgcaatt gccgtcgatc tggcgttcga attcgatcat aaagtgatcg ttgagcaagg
    10621 gatcaaaggt cgtgagatcg aatgcgcagt tctgggcaac gacaacccgc aagccagcac
    10681 ctgtggcgag atcgtactca ccagcgactt ctatgcctac gacaccaagt acattgacga
    10741 agatggcgcg aaagtggtag ttccggcagc cattgcgcca gaaatcaacg ataagatccg
    10801 ggcgattgcc gttcaggctt atcaaacgtt gggatgcgca ggcatggcgc gtgtagacgt
    10861 gtttttaacc ccagagaacg aagtggtgat caacgagatc aacacactgc ctggcttcac
    10921 caacatcagt atgtatccga agctgtggca agccagcggt ctgggttaca ccgatctgat
    10981 cacacgtttg attgagctgg cgctggagcg tcacgctgcg gataacgcat tgaaaaccac
    11041 aatgtaatat tttaacgccc gataatattc ttattgggcg ttttcagttt cttcatcgcg
    11101 acgacgaata atcaaccccg ccagccagaa actaatcacc cacgtcacca gaccgacggc
    11161 ataggtctgc caaccttttg cttcaaatcc cagtaacccc accacgccat taagaatgaa
    11221 tataaggcca atggcgaacg catagtagtg ccagtcacgg cggattttta caggcagatt
    11281 catggcagct ccgttaacga aaaacaacat ccttgcatat tctgtaacaa ccgtctgtgg
    11341 tgtagacaac attttcgtaa ttgttaataa atttaactta aggttgccat tttgtgactc
    11401 acaacgaaga ttcacgcttc gggaatattc ccaacatcaa tttaccatga ttctgatatt
    11461 gacaatctaa atgacctgtc agacttgcca taagccgctg gtatcacacc agaagagaag
    11521 cagatgactt ccggaggttt ttatggctga tttcaccctg tcaaaatcgc tgtttagcgg
    11581 aaaatatcgc aatgcctctt caacgcctgg caacattgcc tatgcgttgt ttgtgctgtt
    11641 ttgcttttgg gctggggcgc aattgctgaa cctgttagtg catgcgcccg gcgtctatga
    11701 gcgtttaatg caggtccagg aaacaggtcg cccacgggtg gaaattggtt taggtgtcgg
    11761 caccattttc gggctgatcc cgtttttagt aggctgcctc atttttgcag tggtggcgct
    11821 atggctgcac tggcgacatc gccgccagta agatttacgt tgccagatac ggcctaaaac
    11881 gccttatctg gcatgacatt cctgtttgat cactgtttca tacaacgcgc ccgccgttcg
    11941 tctacgcgct tcgcaaacca ggccgtagtc aggttgcggg tgattttcgg gctttccagt
    12001 tgaatgccag gcaacatttc gcggggtagt gatttacccg ttttcgcttc ggcaagttga
    12061 taaactttct tgtacagcgc cgtctcctca aaagagaagc tgtcaccttt ctctaactga
    12121 cggcgaattt cgctgtcgct catccccagt tttcccgcca gtttgcgcgt tgccagttcg
    12181 gttttcccgg gttctttact gtcgtaacga attaaatcac cgtccagtgc cagcttcacg
    12241 ccgctggcct tactgaccgc gttctgaaac gcggcattac ggctggcgta ccagccagcg
    12301 ttaaaatcag caaagcggta tatcggtgcg ctatagctgg cgggataatt cagtaaatgg
    12361 taagtaccaa accacaaccc gccgcggcga ctgaagactt cctgacgaac tgtaccgtcc
    12421 attttccacg gatacccttt ggtatgctgt tcggcaaaag caatgctgac ctgcatcggc
    12481 ccaccggtgc gcaccggatt aagcgaaaca aacagcgtct gccccattgg taccatgctg
    12541 atcagatcgt caaaaatcgc gctcaattgc ttttctgtac gcaccgaatc taaccgttcg
    12601 ctataacttt tgccgtttgg cgatttgatt tttagcgcgg tatgaaccag aaaagcagga
    12661 atgtgcatcc gttcagcacg acggtcaatc tcttgccagg cgatcttgct taagcccgga
    12721 acggccggat ctgcctgata atttgactcc tgctgcgcca ccgccagcac cgagcagacg
    12781 ttttccagcg tcggtgccag cccctgactt tcaaaggtgg tggcgagata tttcgcccag
    12841 gcatcgcggt ctttcacgct cgcaggcatc ttctgccgca cgacgctcgc tacatctatc
    12901 gctttttcgc cctttttcaa cggttgcgga gcctgactac tacaccccgc taaaaccaga
    12961 accgccaaca atgacagcga agatagatga ttgacgcgcg acattacttc tcctttttag
    13021 ctcaaggtat gggttacttc ctgaattttg tcaccatcca gctcatgttc aaagctgcgc
    13081 agacgtttgt agatagacat caactcaacc agtgtggtcc atgagttaat caggtactgg
    13141 aaagcaccgc gaacctgacc aaaaacgttg gtaatctgcg tcatcaagcc gagcgtaatc
    13201 gtaccggcaa caattgacgg aaacagcaag aacaaaccga aaacgttatc gacctgcaaa
    13261 tagagaatgc gggcgatgtt gaaatacata tagtgaaaat agaggcgaaa atagtttttc
    13321 cgtacggcgc taaacagctc gcgtaccgta ggcggcgtcg cgcgcgtggc atcgtcttca
    13381 ccataaacca gctctttacg gtaggcggcc tctactcgct ggtttttaaa ctccagcccc
    13441 ggcagtttga tccctaccac tgccagcaat ccggtcccca tcagcgacca gacgatagcg
    13501 gcaatcacca gaccatacgg aatgtgcccg ataatcggca gctccggcac atgcgcggag
    13561 agcgttacca gcaccggcag gaaggcgacc aacgtcatga tggcgttgat aaaactgacg
    13621 cccatattct ccagcgttga agcaaaacgc atggtgtctt cctgcacacg ctgtgcggca
    13681 ccttcgatat gacgcagttg ttgccagttc gccatgtaat attcgttcat cgccgtacgc
    13741 cagcggaaca catagtgact gacaaagaag ttgttcagta cactgatcac caccgcgatc
    13801 agcgcaatcc ccagaaagac gcccacttcg cggtaaaatt gttcgatagt gactttatgc
    13861 ggcgaactta gcgcggtttg aatcagatca tagaacggtg cataccaggc gttgacggcg
    13921 accccgactt ccaccaaaaa ccaggtgacg aagatgatca gtgcagtacc gagtattgac
    13981 cagtattgcc aacggtgcgg gctgtagata aaccagaaaa atgcgaaaag tcctacgcaa
    14041 acaatgtagt aagcgtaaaa aatcaggaaa tccaacgacc agaaacgcgc ggcgctaatc
    14101 gggatctgcc cggaagcgcc ggtgatacgc gccacccagt ctcccccacc ggcttgccag
    14161 aagataacgg caatcaatgc ccaaacaaag gccgagagaa aaaacgctcc cggctttggg
    14221 aaaaaagact taaacatatg cactcctgct aacttcttat cgttttaaca actgctgtgt
    14281 attaaccgca tgaccactac aaagcgtcag ccaaatgaaa ccgcccattg tgacccatag
    14341 caaggcgctt agttcgccag cctgaccata agaattgttt cgacggattt cacaaaccaa
    14401 agattgttta cataagcgga ttaacacgcg caggatcaca aatgcaggca ttggtgagca
    14461 ggaaaaagat cgtgtttacg cgccgttacg tttttaacac tattattgca ctaattcgcc
    14521 ctttgcaatc catcaatgag tagtataaat acgctcagtt accttcattc aatctatgga
    14581 caccaccgtt gaaacgtagt ctactttttt ctgccgtgct gtgtgcggcg tcattgacct
    14641 ccgtccatgc ggcgcagccg atcactgaac cggagtttgc ctctgatatt gtcgatcgtt
    14701 atgccgatca tattttttac ggcagcggtg ccacggggat ggcgctggtt gttatcgacg
    14761 gtaaccagcg cgtctttcgc agttatggcg aaacgcgacc tggtaataac gttcgcccgc
    14821 agctggattc ggtcgtgcgt attgcttccc tcaccaagct aatgaccagt gaaatgctgg
    14881 tgaaattgct cgaccagggg accgtgaagt taaacgatcc gctaagtaaa tatgctccgc
    14941 caggcgcacg cgtgccaacc tacaatggga cgcccattac cctagtgaat ctggcaaccc
    15001 ataccagcgc cctgccccgt gaacagcccg gtggcgcggc acatcgtccg gtgtttgtct
    15061 ggccaacgcg cgagcaacgc tggaaatacc tttctacggc gaagctgaaa gccgcgccag
    15121 gcagtcaggc ggcgtactct aaccttgcgt tcgacctgct ggcagatgca ctggcgaatg
    15181 cgtccggcaa gccttatacc cagttgtttg aagagcagat tacccgtcca ttggggatga
    15241 aagacaccac ctacaccccc tcaccggatc agtgccgccg tttaatggtt gctgagcgcg
    15301 gtgccagtcc gtgcaataac acgctggcgg caattggcag cggcggcgtc tattccacgc
    15361 ctggcgatat gatgcgctgg atgcagcagt atttatcatc tgatttttat cagcgcagta
    15421 accaggcaga tcgcatgcag acgttgattt atcagcgcgc gcagtttacc aaagtgattg
    15481 gcatggatgt ccccggcaaa gcggatgcgc ttggtttagg ctgggtatat atggcctcga
    15541 aagagggtcg tccggggatt attcagaaga caggcggtgg tggcggtttc attacctata
    15601 tggcgatgat cccgcagaag aatattggcg cgtttgtggt ggtcactcgt tcgccgttga
    15661 cgcgctttaa aaatatgagc gatggcatca atgatctggt gaccgagcta agcgggaata
    15721 aaccgttggt tatccctgca tcctgattaa tactctgaag gcaaacggtt gatagcgacc
    15781 agtttgcctt tattcatttc gatatagccg cctttacgca aagcagcgag aacttctgcg
    15841 acgacagaac gcgatatgcg tgtacgttga tggatataat tcatcacacc aatacgtgat
    15901 cgcaattctt cattccagtc aatcattgat aataatgttg cgcggatttg ttcgtaggaa
    15961 ttatgcccaa tgagctgcac gtcgcgtaat tccagaattc tattttgcca agctaaccag
    16021 taaaaagcgt ctcgccagag ttgattttgt tcaataagcg taatggtttg tttggctggt
    16081 agatgatatc ccgtacaatt tccttctgat attaatttgt atggtatatc gtttttcatt
    16141 aaaccatcag ccagccccat aatataagaa gcctgggtaa taccgataag tacgttttct
    16201 tctctacgca gagagataac gccctctaaa ataacgaaag tatcttcgct attgacatca
    16261 ctggaaaata taacttgctt ttcattatta aactcgaagc gcgtaccgta tctggacaaa
    16321 catttatcga gcttaccaaa ttcctgaaga ggtttaacta cagataacat ttgcgcgtcc
    16381 tttgcagtaa tgcccgtcaa atccttgacg ggcattattt agattaaatt accagaattt
    16441 cttcggagtg aagaatatta ccaagtatat ttaacaccca cgttcgcgga ccagtcttga
    16501 tctacgtcac caccaccgag gtagttagca tcggtatagg cgctgaagtt cttggtgaag
    16561 ctgaactgag tacccagacc aacacgtacc gcagaccctt cagtaccgtt atcgatggaa
    16621 tcaccgttca catcgttatc gttgtttgag tcgtcgtaga cgtaagccag tttgaagtac
    16681 ggagtcagag cctgatcttc gctgtaggtg aaggtataac ctgcatctac acccagttca
    16741 taacgcatgc tgtcgtaaga ctgaccgtca actttcatgt cgttgctcag ctggtagtca
    16801 tcaccagact ggaacagacc agaaacgctg ccgtaaggag tcacgtaacc agcatcaccc
    16861 agtttgaagt cgtaaccggc tttcaaaccg aagccccacg cgtcagagtt ggtgctaccg
    16921 tcaacgtaag taccgttgct catggttgca gacaggtcgt tgttgaagtg agagtagctc
    16981 aagctaccat caacaaagac gttgttcgcg aagtgagcag aagagtagat gtaggcagtc
    17041 tggctgtctt gatccacctg accagaacgg tcattcatgt cacctttagc gaagcctgca
    17101 gccgcaccga cgatccactt agcgttgtta ccgtcaattt tggtatcaac accgaccatg
    17161 atgccgttaa catcctgatc atagttgatg gtgccgttgt cgccgttgaa gttaccaccg
    17221 aagtagctta cccatgcgcc gccgttatca gccaggccat gacgagagtt ggtcagacga
    17281 gtaccaacgg tgtcttgttc caggttccag atattggtgt tcgcagacgg gatgctcagc
    17341 gccatgttag cgtagtcggt cagctccatc tgttgcagaa caacggtgtt accgcgctgt
    17401 tcagcctgat aggtgtatgc acccaggtca gctttgttag cagcagagaa ggtcgcgttg
    17461 gtgttagcgt cgtttacccg aataagttct ttatctttgt aatcagcgat agtgccagcg
    17521 ccagttgcgt tgtcgatacg aactttgtag ttaccggttg cagcaacaac gttatcaaca
    17581 gagctgttat ccagttcagt accgttgtct acgtcgccgt taccattgat agtcaggtga
    17641 ccatcagagt tcatagcaac aataccgtaa ccgtagttag acttggaagt atcccacgta
    17701 cggtcgttca ccagatcagc gttcagaacg taatcgctgc tgttgatgtc gaacacacca
    17761 gaaattacgt tgccattatg gtcagcaatg ttgccgctgg tcagttccag tttatcagta
    17821 cggaaagctt cagtatcgaa ctgatcaaca ttcacatcca gcacaccacc gttagtcaca
    17881 gtgatagtat tggtatacag attagaataa ttattccaac cggtagattc ggttaaatta
    17941 acggtactgt agctatcaac agtcaggtgg tctgtagcaa ccacgccatt tgcaccaata
    18001 ttcagtgaag aaccgttggt taaactaatg gtatctgata ccagagagga atcagtaaca
    18061 tttacctgag agccattatt tacagctaat gtatcaatta ctgaactatt aacggtattc
    18121 cattctgaac tattgttcag tgttacgtta aatacgccgc tctggaatac tttgttgtca
    18181 ataatacggc ctgaagt
//
LOCUS       DADMHC010000066        18154 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.066, whole genome shotgun sequence.
ACCESSION   DADMHC010000066 DADMHC010000000
VERSION     DADMHC010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 18154)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18154)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18154
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.066"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            254..481
                     /gene="feoA"
                     /locus_tag="JNZ57_001926"
     CDS             254..481
                     /gene="feoA"
                     /locus_tag="JNZ57_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transporter A"
                     /protein_id="HAY8828157.1"
                     /translation="MQYTPDTAWKITGFSREISPAYRQKLLSLGMLPGSSFNVVRVAP
                     LGDPIHIETRRVSLVLRKKDLALLEVEAVSC"
     gene            498..2819
                     /gene="feoB"
                     /locus_tag="JNZ57_001927"
     CDS             498..2819
                     /gene="feoB"
                     /locus_tag="JNZ57_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(2+) transporter permease subunit FeoB"
                     /protein_id="HAY8828158.1"
                     /translation="MKKLTIGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGQ
                     FSTTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERNL
                     YLTLQLLELGIPCIVALNMLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALK
                     LAIDRYKANENVELVHYAQPLLNEADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAY
                     AGEASQHLDAALARLRNEMDDPALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDK
                     IVLNRFLGLPIFLFVMYLMFLLAINIGGALQPLFDVGSVALFVHGIQWIGYTLHFPDW
                     LTIFLAQGLGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGK
                     SFVPLIVGFGCNVPSVMGARTLDAPRERLMTIMMAPFMSCGARLAIFAVFAAAFFGQN
                     GALAVFSLYMLGIVMAVLTGLMLKYTIMRGEATPFVMELPVYHVPHVKSLIIQTWQRL
                     KGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVDNINDSALASVSRVITPVFKPIGVHED
                     NWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDEEFNPAEFNLGEELFSAIDETWQSL
                     KDTFSLSVLMNPIEASKGDGEMGTGAMGVMDQKFGSAAAAYSYLIFVLLYVPCISVMG
                     AIARESSRGWMGFSILWGLNIAYSLATLFYQVASYSQHPTYSLVCILAVILFNIVVIG
                     LLRRARSRVDIELLATRKSVSSCCAASTTGDCH"
     gene            2819..3055
                     /gene="feoC"
                     /locus_tag="JNZ57_001928"
     CDS             2819..3055
                     /gene="feoC"
                     /locus_tag="JNZ57_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[Fe-S]-dependent transcriptional repressor FeoC"
                     /protein_id="HAY8828159.1"
                     /translation="MASLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMG
                     KAVRIQEEPDGCLSGSCKSCPEGKACLREWWALR"
     gene            3258..4136
                     /gene="rpnA"
                     /locus_tag="JNZ57_001929"
     CDS             3258..4136
                     /gene="rpnA"
                     /locus_tag="JNZ57_001929"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-promoting nuclease RpnA"
                     /protein_id="HAY8828160.1"
                     /translation="MSKKQSSTPHDALFKLFLRQPDTARDFLAFHLPAPIHALCDMKT
                     LKLESSSFIDDDLRESYSDVLWSVKTEQGPGYIYCLIEHQSTSNKLIAFRMMRYAIAA
                     MQNHLDAGYKTLPMVVPLLFYHGIESPYPYSLCWLDCFADPKLARQLYASAFPLIDVT
                     VMPDDEIMQHRRMALLELIQKHIRQRDLMGLVEQMACLLSSGYANDRQIKGLFNYILQ
                     TGDAVRFNDFIDGVAERSPKHKESLMTIAERLRQEGEQSKALHIAKIMLESGVPLTDI
                     MRFTGVSEEELAAASQ"
     gene            complement(4165..4935)
                     /gene="bioH"
                     /locus_tag="JNZ57_001930"
     CDS             complement(4165..4935)
                     /gene="bioH"
                     /locus_tag="JNZ57_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709189.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HAY8828161.1"
                     /translation="MNNIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHL
                     VDLPGFGRSQGFGALSLADMAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVQAL
                     VTVASSPCFSARDDWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARA
                     LKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVPMPFLRLYGYLDGLVPRKVVPML
                     DKLWPRSKSYIFAKAAHAPFISHPVEFCHLLVALKQRV"
     gene            4973..5656
                     /gene="gntX"
                     /locus_tag="JNZ57_001931"
     CDS             4973..5656
                     /gene="gntX"
                     /locus_tag="JNZ57_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417872.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein GntX"
                     /protein_id="HAY8828162.1"
                     /translation="MLTVPGLCWLCRMPLALGHWGICSVCSRAARTDKTLCPQCGLPA
                     THSHLPCGRSLQKPPPWQRLVTVADYAPPLSPLIHQLKFSRRSEIASALSRLLLLEVL
                     HARRTTGLQLPDRIISVPLWQRRHWRRGFNQSDLLCQPLSRWLHCRWDSEAVTRTRAT
                     ATQHFLSARLRKRNLKNAFRLELPVQGRHMVIVDDVVTTGSTVAEIAQLLLRNGAATV
                     QVWCLCRTL"
     gene            5715..6290
                     /gene="nfuA"
                     /locus_tag="JNZ57_001932"
     CDS             5715..6290
                     /gene="nfuA"
                     /locus_tag="JNZ57_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016942932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S biogenesis protein NfuA"
                     /protein_id="HAY8828163.1"
                     /translation="MIRISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYC
                     PPDAVEATDTALKFDLLTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA
                     DDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLK
                     EGIEKQLLNEFPELKGVRDLTEHQRGEHSYY"
     gene            6651..7967
                     /gene="gntT"
                     /locus_tag="JNZ57_001933"
     CDS             6651..7967
                     /gene="gntT"
                     /locus_tag="JNZ57_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate transporter"
                     /protein_id="HAY8828164.1"
                     /translation="MPLVIVAIGVILLLLLMIRFKMNGFIALVLVALAVGLMQGMPLD
                     KVIGSIKAGVGGTLGSLALIMGFGAMLGKMLADCGGAQRIATTLIAKFGKKHIQWAVV
                     LTGFTVGFALFYEVGFVLMLPLVFTIAASANIPLLYVGVPMAAALSVTHGFLPPHPGP
                     TAIATIFNADMGKTLLYGTILAIPTVILAGPVYARVLKGIDKPIPEGLYSAKTFSEEE
                     MPSFGVSVWTSLVPVVLMAMRAIAEMILPKGHAFLPVAEFLGDPVMATLIAVLIAMFT
                     FGLNRGRSMDQINDTLVSSIKIIAMMLLIIGGGGAFKQVLVDSGVDKYIASMMHETNI
                     SPLLMAWSIAAVLRIALGSATVAAITAGGIAAPLIATTGVSPELMVIAVGSGSVIFSH
                     VNDPGFWLFKEYFNLTIGETIKSWSMLETIISVCGLVGCLLLNMVI"
     gene            complement(8012..10096)
                     /gene="malQ"
                     /locus_tag="JNZ57_001934"
     CDS             complement(8012..10096)
                     /gene="malQ"
                     /locus_tag="JNZ57_001934"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HAY8828165.1"
                     /translation="MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQR
                     TATKVAVTPVPNVMVYTSGKKMPMVVEGSGEYSWLLTTEEGTQYKGHVTGGKAFNLPT
                     KLPEGYHTLTLTQDDQRAHCRVIVAPKRCYEPQALLNKQKLWGACVQLYTLRSEKNWG
                     IGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNA
                     VEDFHLSEEAQAWWQLPTTQQTLQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDE
                     QMTAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMRWGWPAWPEMYQNVDSPEVRQFC
                     EEHRDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVGVAEGGAETWCDREL
                     YCLKASVGAPPDILGPLGQNWGLPPMDPHIITARAYEPFIELLRANMQNCGALRIDHV
                     MSMLRLWWIPYGETADQGAYVHYPVDNLLSILALESKRHRCMVIGEDLGTVPVEIVGK
                     LRSSGVYSYKVLYFENDHEKTFRAPKAYPEQSMAVAATHDLPTLRGYWESGDLTLGKT
                     LGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCLPKRAGHKASLMSMTPTLNRGLQRY
                     IADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWRRKLSATLEMMFADDGVNKLLKD
                     LDRRRRAAAKKQ"
     gene            complement(10106..12499)
                     /gene="malP"
                     /locus_tag="JNZ57_001935"
     CDS             complement(10106..12499)
                     /gene="malP"
                     /locus_tag="JNZ57_001935"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin phosphorylase"
                     /protein_id="HAY8828166.1"
                     /translation="MSQPIFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALA
                     EMLRAQPFAKPVANQRHVNYISMEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDL
                     LEEEIDPALGNGGLGRLAACFLDSMATIGQSATGYGLNYQYGLFRQSFVDGKQVEAPD
                     DWHRSNYPWFRHNEALDVQVGIGGKVTKDGRWEPEFTITGQAWDLPVVGYRNGVAQPL
                     RLWQATHAHPFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQ
                     CACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAW
                     AITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEK
                     VWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTN
                     GITPRRWIKQCNPALAALLDKLLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANK
                     VRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVP
                     RVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIP
                     AADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVE
                     QVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQGGDPYL
                     VMADFAAYVEAQKQVDVLYRDQEAWTRVAILNTARCGMFSSDRSIRDYQARIWQAKR"
     gene            13111..15816
                     /gene="malT"
                     /locus_tag="JNZ57_001936"
                     /pseudo
     CDS             13111..15816
                     /gene="malT"
                     /locus_tag="JNZ57_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312287.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MalT"
     gene            complement(15859..16875)
                     /gene="rtcA"
                     /locus_tag="JNZ57_001937"
     CDS             complement(15859..16875)
                     /gene="rtcA"
                     /locus_tag="JNZ57_001937"
                     /EC_number="6.5.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 3'-terminal phosphate cyclase"
                     /protein_id="HAY8828167.1"
                     /translation="MKRMIALDGAQGEGGGQILRAALSLSMITGQPFTITSIRAGRAK
                     PGLLRQHLTAVKAAAEICRATVEGAELGSQRLVFRPGAVRGGEYRFAIGSAGSCTLVL
                     QTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFY
                     PAGGGVVATEVSPVASFNTLQLGERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSL
                     HEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLAS
                     PAAVGEYLADQLVLPMALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFGLIETDGVTR
                     VSIE"
     gene            complement(16879..18105)
                     /locus_tag="JNZ57_001938"
     CDS             complement(16879..18105)
                     /locus_tag="JNZ57_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HAY8828168.1"
                     /translation="MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIA
                     VMPDVHLGKDSTIGSVIPTKGAIIPAAVGVDIGCGMNALRTALTAEDLPENLAELRQA
                     IETAVPHGRTTGRCKRDKGAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHL
                     GTLGTGNHFIKICLDESDQVWIMLHSGSRGIGNAIGTYFIDLAQKEMQETLETLPSRD
                     LAYFMEGTEYFDDYLKAVAWAQLFASLNRDAMMENVVTALQSITQKTVRQPQTLAMEE
                     INCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCS
                     CSHGAGRVMSRTKAKKLFSVEDQIRATAHVECRKDAEVIDEIPMAYKDIDAVMTAQSD
                     LVEVIYTLRQVVCVKG"
BASE COUNT         4176 a         4996 c         4559 g         4423 t
ORIGIN      
        1 cagtccgggt aattcactat tcgaattata ttttcgctgc gatataacct tgagccacat
       61 caacattgat gtcagattat tattcaaacc aacattcgca cacattttaa gtattgctga
      121 tagaaaacat tctcattatc attgtgttgt tgattattta atctctcctt tgttggcaaa
      181 tcatctggtc tcatgtcgct gtcaaacgcc ccatgaggta gttatccagt taatgagaaa
      241 caagtaggca cctatgcaat acactccaga tactgcgtgg aaaatcactg gcttttcccg
      301 tgaaatcagc ccggcatatc gccaaaaact gctttctctt ggcatgttac ctggctcctc
      361 ttttaatgtg gtgcgcgtcg ctccactcgg cgaccccatt catatcgaaa cccgtcgtgt
      421 gagcctggta ttacgcaaaa aagatctggc cttattagaa gtggaagcgg tttcctgtta
      481 atacggtgat aacaacaatg aaaaaattaa ccataggctt aattggtaat ccaaattctg
      541 gcaagacaac cttatttaac cagctcactg gcgcacgtca gcgtgtaggt aactgggctg
      601 gcgttaccgt cgaacgtaaa gaagggcaat tctccaccac cgatcatcag gtcacgctgg
      661 tggacctacc cggcacctat tctctgacca ccatctcatc gcagacctcg ctcgatgagc
      721 aaatcgcctg tcactacatt ttgagtggcg acgccgacct gctgattaac gtggtggatg
      781 cgtctaacct tgagcgtaac ctgtacctga cgctacaact gctggaactc ggcattccct
      841 gcattgtggc actgaacatg ctcgacattg ccgagaagca aaatattcgt attgaaattg
      901 atgctctgtc ggcgcgtctg ggctgtccgg tgatcccgct ggtttcaacc cgtggtcgcg
      961 gtattgaagc gctcaagctg gcgattgatc gctataaagc taacgagaat gtggaactgg
     1021 tgcattacgc acagccgcta ctcaacgaag cagattcact ggcaaaagtg atgccttccg
     1081 acatcccgct gaaacaacgt cgctggctgg gcctgcaaat gctggaaggc gatatctaca
     1141 gccgcgccta cgccggtgaa gcgtcgcagc atctggatgc cgccctcgcc cgtctgcgta
     1201 atgagatgga cgatccggcg ctgcacattg ccgatgcgcg ttaccagtgc attgctgcca
     1261 tctgtgatgt ggtaagcaac accctgacgg cagaacccag ccgtttcacc actgcggtag
     1321 ataaaatcgt gctcaaccgt ttcctcggtc tgccgatttt cctctttgtg atgtacctga
     1381 tgttcctgct ggctatcaac atcggcgggg cgttacagcc gctgtttgac gtcggctccg
     1441 tggcgctatt tgtgcatggt attcaatgga ttggctacac gctccacttc ccggactggc
     1501 tgactatctt cctcgcccag ggcctgggtg gcggcattaa caccgtgctg ccactggtgc
     1561 cgcagattgg catgatgtac ctgttcctct ccttccttga ggactccggg tatatggcgc
     1621 gtgcggcgtt tgtgatggac cgtctgatgc aggcgctggg cttgccgggg aaatcctttg
     1681 tgccgctgat cgtcggtttc ggttgtaacg taccgtcggt aatgggtgca cgtacgcttg
     1741 atgcaccgcg tgaacgtctg atgaccatca tgatggcacc gtttatgtcc tgcggcgcgc
     1801 gtctggctat cttcgcagta ttcgcggctg ccttcttcgg gcagaacggt gcgctggcgg
     1861 tcttctcgct gtatatgctg ggtattgtga tggcggtgct gactggcctg atgctcaagt
     1921 acaccatcat gcgcggtgaa gcgacgccgt ttgtcatgga gttgccggtc tatcatgtac
     1981 cacacgttaa aagcctgatt atccagacct ggcagcgtct gaaaggcttc gttctgcgtg
     2041 ctggtaaagt gatcatcatc gtcagcattt tcctgagcgc tttcaacagc ttctcgctga
     2101 gcgggaaaat cgtcgataac atcaacgact cggcgctggc gtccgtcagc cgggtgatca
     2161 ccccggtctt caagccaatt ggcgtgcatg aagataactg gcaggcaacg gttggcctgt
     2221 ttacaggtgc catggcgaaa gaagtggtag tgggtacgct caacaccctc tacaccgcag
     2281 aaaatattca ggacgaagag ttcaatccgg cagagtttaa cctcggtgaa gagctgttca
     2341 gtgcgataga tgaaacctgg cagagcctga aagacacctt cagccttagc gtactgatga
     2401 accccattga agccagcaaa ggcgacggcg aaatgggtac cggggcgatg ggcgtgatgg
     2461 atcagaaatt cggtagcgca gcagcagctt acagctacct gattttcgtc ctgctgtatg
     2521 taccatgtat ctcggtgatg ggagccatcg cccgtgaatc aagccgtggc tggatgggct
     2581 tctccatcct gtgggggctg aatatcgctt actcgctggc aacattgttc tatcaggtcg
     2641 ccagctacag tcagcaccca acttacagcc tggtgtgcat tctggcggtt atcctgttta
     2701 acatcgtggt tatcggtctg ctgcgccgcg cgcgtagccg ggtggatatc gaactgctgg
     2761 caacccgcaa gtcggtaagc agttgctgcg cagccagcac caccggtgat tgccattaat
     2821 ggcttcactt attcaggtgc gcgatttgct ggcgttacgg ggccgtatgg aagcggccca
     2881 gataagccag acattgaaca ctccacagcc aatgattaac gccatgctgc aacaactgga
     2941 aagtatgggc aaagccgtgc ggattcagga agaacctgac ggctgcctct ctggcagttg
     3001 taaaagctgc ccggaaggaa aagcctgtct gcgcgagtgg tgggcgcttc gttaacctta
     3061 ctccatcgcc tgttttggaa agcccggtat gcgtctgcat ccgggctttt ttgcgtgcgg
     3121 ctttccataa aaatgcaact cttgcagcac ggcgtaagtt cctttgaaag catctcgcag
     3181 ggatgaaaac tcgctaatac acaggtgtgg agtggcgcgt agagtcgcgg cattcaaaca
     3241 acaggtgaag gaacgccatg agcaaaaagc agagttccac cccacacgat gcgctgttca
     3301 aactcttttt acgccaaccg gacacggctc gtgattttct tgcgtttcat ttacctgcac
     3361 ccattcacgc gctttgtgat atgaaaaccc tcaagctgga gtcgagcagc tttattgatg
     3421 acgatctgcg tgaaagctat tccgatgtgc tgtggtcggt gaaaacggaa caaggaccag
     3481 gatacatcta ttgtctgatt gaacatcaaa gcacctcaaa caaactgatc gcatttcgca
     3541 tgatgcgtta cgctattgcc gcaatgcaaa atcaccttga tgctggatac aaaacgttgc
     3601 cgatggtggt gccattgttg ttttaccacg gtattgaaag cccctatccc tattcgctgt
     3661 gttggctgga ttgtttcgcc gatcccaaac tggcaaggca gctttatgcc tccgcatttc
     3721 cgctgattga tgtcaccgtc atgcctgatg atgaaatcat gcagcaccga cgtatggcgc
     3781 tgctggagtt aattcaaaaa catattcgtc aacgcgacct gatggggcta gtagagcaaa
     3841 tggcctgctt attaagtagt ggatacgcta atgacagaca aatcaaaggg ctgtttaatt
     3901 acatactgca aaccggcgac gcggtacgtt ttaacgattt tatcgacggc gttgccgaac
     3961 gttcaccgaa acacaaggag agtttaatga caattgcgga aagattgcgg caggaggggg
     4021 aacaatccaa agccctgcat atagccaaaa taatgcttga atccggagtc cctcttacag
     4081 acatcatgcg ctttaccggg gtgtcagaag aagagttggc tgcggcgagc cagtaaattt
     4141 ctgtctcgcc atttcaaaag ttgcctacac cctctgcttc aacgccacca gcaggtgaca
     4201 aaactcgacc ggatgcgaaa taaacggcgc atgggccgct ttggcgaaga tatatgattt
     4261 gctgcgaggc cagagtttat ccagcatcgg caccactttg cgcggcacca gaccatcgag
     4321 atagccatac aatcgcaaaa acggcatggg cacgttttgc agcggctgac ggagatcaac
     4381 cgttttcagg atttccagcc cgccattaag cacgtcaacc tccggcatcg gtaacgccag
     4441 aacggttttc ttcaacgccc gcgcatcctg gcgcgccgtt tcagtcccca tggtttgtaa
     4501 cgccaggaac cgctccactg tacgctgaaa atcatcactg agttgctgct gaaatcccgc
     4561 cagcacgtcc ggttttatcc ccggccaatc gtcacgagca ctaaaacaag gtgacgacgc
     4621 cacggtgacc agcgcctgaa cacgctcggg atgggttaac gcaatctggc ttgccaccag
     4681 cccgcccaga ctccagccta accaaatggc tttatcaggt gcctgttgca gcacggcttc
     4741 ggccatatca gcaagtgaca gcgcaccaaa tccctggctg cgcccgaagc cgggcagatc
     4801 aacaaggtgc agcgtaaaat gcgagctaag ttcctcgtca atgcaacgcc acacttcggc
     4861 attcagtccc catccgtgca gcagcacaag atgaacattc ccctgacctt tggtctgcca
     4921 ccagatgtta ttcatccgct attgttctct tttgacttac aaggatgaac atatgctaac
     4981 agtaccggga ttatgctggc tatgccgaat gccgctggcg ttaggtcatt gggggatttg
     5041 ttcggtctgc tcacgcgccg cccgtacaga taaaacgtta tgcccacaat gtggattacc
     5101 cgccacacac tcacatcttc cctgcggtcg cagcctgcaa aaaccaccgc cctggcaaag
     5161 actggtcacg gttgccgact atgcgccgcc gttaagtccg cttatccacc agcttaaatt
     5221 ttcccggcgc agtgaaatcg ccagcgccct gtcacgtctg ttactattgg aagtcttaca
     5281 cgctcgtcgc accaccgggt tgcaattgcc ggatcgcatc atcagcgttc cgttatggca
     5341 gcggcgtcac tggcgtcggg gatttaatca gagcgatttg ctgtgtcagc cgttatcacg
     5401 ctggttgcac tgccgatggg atagcgaagc cgtcacacga acacgggcca ctgcgaccca
     5461 gcattttctc agtgcccggc tacgcaagcg caacctgaaa aatgcctttc gtcttgaatt
     5521 gcccgtgcaa ggtcgccata tggtgattgt ggatgatgtc gttaccaccg gaagtaccgt
     5581 cgcagagatt gcgcagttgc ttttacgcaa tggtgcggcg actgtccagg tctggtgcct
     5641 ttgtcgaacc ttgtagagcc tcgatgatgg gcgtattata accaactaaa atagtcaact
     5701 attaggccat tactatgatc cgtatttccg atgctgcaca agcgcacttt gccaaactgc
     5761 tggcaaacca ggaagaaggg acacaaatcc gcgtatttgt gattaaccct ggcacgccta
     5821 acgctgaatg tggtgtttct tattgtccgc cggatgccgt ggaagccacc gacactgccc
     5881 tgaaatttga cctgctgacc gcgtatgttg atgagttaag cgctccttac ctggaagatg
     5941 cagagatcga ttttgttacc gaccagttgg gttctcagct aacactgaaa gcgcctaacg
     6001 ccaaaatgcg taaagtggca gacgatgcac cactgatgga gcgcgtggag tatatgctgc
     6061 agtcgcagat caacccacag cttgctggtc acggtggccg cgtttcactg atggaaatca
     6121 ccgaagacgg ttacgccatt ctgcaatttg gcggcggctg taacggttgt tccatggtcg
     6181 atgtgacgct gaaagaaggg atcgagaagc agctgctaaa cgaattcccg gagctgaaag
     6241 gtgtgcgcga tctcaccgaa caccagcgcg gcgaacactc ctactactaa gttatcccct
     6301 cttttgtaga ttgcccgatg cgacgctaaa gcgtcatttc gggcctacgt tgaacatgtg
     6361 ccagacgttg gcgcagcatt gctttggcaa atccctccct tcgtttctcc gcgataatat
     6421 gaccaacctc tcataattta aatttactcc gctctggtga ttctcaaacg ccagatgtta
     6481 cccgtatcat tcacatgggt accaaacata ctcctgacat ctgactacaa taattagttt
     6541 tagtgggtat cagtcgtggt gccgcaatat ctctgttccc gattgggata attagagttt
     6601 gtcgtcagaa aattgacgtt acccataaca aatgaagggc caggtaaatc atgccattag
     6661 tcattgttgc tatcggtgta atcttgttgt tgctcctgat gatccgtttc aaaatgaacg
     6721 gcttcatcgc tctcgtcctc gtggcgcttg ctgttggatt aatgcaaggg atgccgctgg
     6781 ataaagttat tggctccatc aaagccggtg tcggcgggac gctcggtagc cttgccctga
     6841 tcatgggttt tggcgcgatg ctgggcaaaa tgctggcaga ctgcggtggc gcacaacgta
     6901 tcgccaccac cctgattgcc aaatttggta aaaaacacat ccagtgggcg gtggtactga
     6961 ccggttttac cgttggtttt gccctgttct atgaagtggg ctttgtgctg atgctgccgc
     7021 tggtgtttac catcgcggct tctgcgaata ttccactgct gtatgttggt gtaccaatgg
     7081 cagctgcact gtctgtgacc cacggcttcc tgccaccgca tccgggtccg actgcgattg
     7141 ccaccatttt caatgccgac atgggtaaaa ccctgctgta cggtactatt ctggcaatcc
     7201 cgaccgtgat tctcgccggt ccggtttacg ctcgcgtgtt gaaaggtatc gataagccga
     7261 tccctgaagg tctgtacagc gcgaaaacct tcagcgaaga agagatgccg agctttggcg
     7321 tcagcgtctg gacctctctg gtgccggtag tgctgatggc gatgcgtgcg attgccgaaa
     7381 tgatcctgcc gaaaggtcac gctttcctgc cggtagcgga gttcctcggt gacccggtaa
     7441 tggctacgct gattgccgtg ctgattgcga tgttcacctt tggtctgaac cgtggtcgtt
     7501 caatggatca gattaacgac acgctggttt cttccatcaa aatcattgcg atgatgctgt
     7561 tgatcatcgg tggtggcggt gcgttcaagc aggtgctggt agacagcggc gtggacaaat
     7621 acattgcttc catgatgcac gaaaccaaca tttctccgct gctgatggcc tggtcgattg
     7681 ctgccgtact gcgtatcgcg ctgggttccg caaccgttgc ggcaatcact gcgggtggta
     7741 tcgcggcacc gctgattgca acgacgggtg ttagcccgga gctgatggtt attgcggtgg
     7801 gttccggtag tgtgattttc tctcatgtga acgatccggg cttctggctg ttcaaagagt
     7861 actttaacct gactatcggc gagaccatca aatcctggtc gatgctggaa accattatct
     7921 cggtgtgcgg tctggtaggc tgtctgctgc tgaatatggt gatttgataa cactgactgc
     7981 cggatgcatc gcatccggca tcaaccgcac tctactgctt cttcgctgca gctctgcgcc
     8041 gtctgtccaa atccttcagc aacttattca cgccatcatc ggcaaacatc atctcaagcg
     8101 ttgcggaaag cttgcgtcgc cagtttttat actggtaact ggtgccagga atattcaccg
     8161 gttcggccat atccagccag tcttccggct gtagtcctaa cagagcactg ttactgtcgg
     8221 caatgtagcg ctgcaaacca cgattaagcg tcggcgtcat cgacatcaac gatgccttat
     8281 gcccggcacg ttttggcaga caaccatatt tatgcagtgc atccagcagc ccttgcttcg
     8341 ccagttcgcg atcctgatac agaccgcgca gtaccacttc atccggatac agccccaggg
     8401 ttttgcccaa cgttagatcc ccgctctccc agtaaccgcg cagcgtaggc aggtcatgtg
     8461 tcgccgcaac cgccatcgac tgctccggat acgctttcgg tgcacggaac gtcttctcgt
     8521 ggtcgttttc gaaatagagc actttgtagg agtacacacc gctgctgcgc agcttaccga
     8581 caatctccac cggtacggta ccgagatctt caccaatcac catacagcga tgacgtttac
     8641 tttcgagtgc cagaatcgag agcagattat ccaccggata gtgaacatac gcgccctgat
     8701 ctgccgtctc gccatacggt atccaccaca aacgcagcat cgacatcaca tggtcaattc
     8761 gtaatgcgcc gcagttttgc atattggcac gcaacagctc gataaacggt tcataggcac
     8821 gcgcggtgat gatatgcggg tccattggcg gtaatcccca gttctgcccc aacgggccga
     8881 ggatatccgg cggcgcgcca accgacgctt tcaggcaata tagttcacgg tcacaccagg
     8941 tttccgcccc accttccgct acgccaaccg ccagatcacg atacaagcca atcggcattt
     9001 catagccctg gcttatctcc cagcaggcgg caaactggct gtaagccagc cactgcaacc
     9061 agagataaaa atcgacgtca tcacgatgtt cttcgcagaa ctgacgcact tctggtgaat
     9121 ccacgttctg atacatctct ggccatgcag gccagcccca gcgcatttcg tcctctttca
     9181 cttgctgggc atgtagcgca tcaaaggctg cctgccagaa caggctgtcg ccctgctctg
     9241 caacaaactg gcgaaacgcg gtcatctgct catcatcacg ttgcgcgaaa cctttccacg
     9301 ccattcgtaa tgctgtcatt tttagggcgg taaccgtgga gtaatcgacc cagtcggcat
     9361 cgcgcgcctg ttgcagcgtc tgttgcgtgg tcggcaactg ccaccaggcc tgagcctctt
     9421 cgctaagatg gaaatcttca acggcgttaa cgtcgatata aatcacattc agccaacggc
     9481 gagaagacgg gctgtatggg ctggcactct ccggatttgc cggatagagc gcatgaatcg
     9541 ggttcaggcc gatgaacgac ccgccacgtt ttgccacatc caccagcatc gctttgagat
     9601 cgccaaaatc cccaataccc cagttttttt ccgatcgcag cgtataaagc tgaacgcagg
     9661 caccccacag cttttgttta ttcagcaacg cctgcggttc gtaacagcgt ttcggggcga
     9721 caatcacccg gcaatgcgcg cgctggtcgt cctgggtgag tgtcagtgtg tgataacctt
     9781 ccggcagctt cgtcggtaga ttgaacgctt tgccccccgt tacatggcct ttgtactgtg
     9841 ttccttcttc ggtggtcagc agccagctat attcgccgct gccctccacc accatcggca
     9901 tttttttgcc gctggtataa accatgacat tcgggactgg cgttaccgcc actttcgtgg
     9961 cggtacgttg atgcatcgcg tcaagcaaac gccgtttggt ttcggcgcta atcgactgcg
    10021 gtttaccgtg ggcattgatg taattggggc taatccccgc cgccagcgcg gcattatcca
    10081 gacgtttgct ttccatcgag cttccttagc gttttgcctg ccagatacga gcctgataat
    10141 cgcgaataga gcgatccgag ctaaacatac cgcagcgggc ggtattgagg atcgccacgc
    10201 gagtccaggc ctcctggtcg cggtacagca catccacctg cttttgtgcc tcaacatagg
    10261 ctgcgaaatc cgccatcacc agatacggat cgccgccttg tttgccgata ctgtgcagca
    10321 tctggtcgaa ggcatgctta tcgccgtcgc tgtatttacc gctttccagc tctttcaata
    10381 ctgcgtccag caccttatct ttcttccgcc atttcaccgg gtcgtagcct ttggccagaa
    10441 ttgccttcac ttgttccacg gtatgaccaa aaataaagat attttcttca ccgactttct
    10501 cggcgatttc aacgttcgca ccatccagcg taccgacagt aagcgcacca ttgagcgcca
    10561 gtttcatatt gccggtaccg gaagcttctt tacctgcagt cgaaatttgt tcggagatat
    10621 ccgccgccgg gatcagtttt tccgccgccg aaacacaata atccggcagg aacaccacct
    10681 tcaacttatc gccaaccagt ggatcgttgt tgatcacgtc agccactttg ttgatcgcaa
    10741 agataatatt cttcgccagg tagtagcccg gtgccgcttt cgcgccgaag aggaagacgc
    10801 gcggtacgcg atcagcctgc gggttttcac gaatttcttt gtacaacgcc agaatatgca
    10861 gcagattcag gtgctggcgt ttgtactcat gcagacgttt aatctgaata tcgaaaatcg
    10921 cctgtggatt gatctcaata ccggtacgaa ctttcacaaa ctccgccaga cggactttat
    10981 tcgcctgctt gatctcgcga tattgctgac ggaatttcgc atcatcagcg aatttttcca
    11041 gattgatcag ctgatcgaga tcgttagccc actctttttg cagtaattta tccaacagag
    11101 ccgccagtgc agggttgcac tgtttgatcc agcgacgtgg ggtaataccg ttggtgacgt
    11161 tatggaattt gttcggccat agctggtgat attccgggaa cagatctttc accaccagat
    11221 cagagtgcag cgccgcaaca ccgttcaccg cgaaaccgcc aaccacacac aggttcgcca
    11281 tatgcacttg tttatcgtgc accaccgcca gtttggccca cactttttca tcgcccggcc
    11341 aggttttctc caccagcgtt ttaaagcgag tattaatttc gttaataatc tgcatatggc
    11401 gcggcagtaa gcctttcacc agtttcacat cccagcgttc cagcgcttct ggcatcaggg
    11461 tatggttggt gtaagcgaaa gttttgctgg taatggccca ggcgtcatcc cagctcatct
    11521 ggtgctcatc gatcagcacg cgcagcagtt ctggaatcgc gatagttggg tgggtatcgt
    11581 tcagctgaat aacttcataa tccgccagtt cgtgcagttt acgccccgcc agatgatggc
    11641 gacgcaaaat atccgctacc gaacaggcac actggaagta ctgctgcatc aagcgcagct
    11701 ttttaccggc agtatggttg tcgtttggat agagaacttt ggtcagtttt tccgcattga
    11761 tgccctgctg ttcggcacgc aggaaatcac cgtcgttaaa tttagtcaga tcaaacggat
    11821 gcgcgtgcgt cgcctgccac agacgcagcg gctgcgccac gccattacga tagccgacaa
    11881 cggggagatc ccacgcttga ccggtaatgg taaactccgg ctcccagcgt ccgtctttcg
    11941 tcactttacc gccaatccct acctgcacat ccagtgcttc gttgtggcgg aaccacgggt
    12001 agttactgcg atgccagtca tccggcgctt caacctgttt gccatcgaca aaagactggc
    12061 ggaacaaacc atattgatag ttcagaccgt aacccgtcgc agactgaccg atagttgcca
    12121 ttgagtcgag gaagcacgcc gccagacgtc ccagaccacc gttacccagc gccgggtcga
    12181 tctcttcttc cagcaggtcc gtcagattga tgtcataagc cttcaacgaa tcctgtacat
    12241 cctgatacca gccgagattc aacaggttgt tgcccgtcag gcgaccaatc aaaaactcca
    12301 ttgagatgta gttaacatgt cgctgattcg ccaccggctt ggcgaatggc tgagcacgca
    12361 gcatttcggc cagtgcttca ctcactgcta gccaccactg gcgaggagtc atttcagccg
    12421 cagaatttaa gccataacgc tgccactgac gtgaaagcgc ttcctgaaat tgcttatcgt
    12481 taaaaatagg ttgtgacata ggagttccac ttttcttaga ttttcaacac aacgttatcg
    12541 ctagtttgcc aggctcgatg ttgaccttcc tcatcctgcg ggggattagg cagggaggag
    12601 ttgcggggat gagcaaggaa atgtgatctc aaccacttaa agctagtgca aaccacagga
    12661 ttagcagcaa atcaatgcaa tacagcgcag aaaatctgta tctaagtgca aaaaatggcc
    12721 gttgcgtatt ttcaaaaagc ggaaggtaac tctataaatt aagtaaagga gtgaaacagt
    12781 ttcacaagta aaatatccag tgtgctccat ctcattctta atagatttat taagatcatc
    12841 tttttagatg gcactttcat caggaatgaa gaagaaaccc ttgcttaaat gaatctgatg
    12901 aacataaggg aaaccagtat tcacgctgga tcagcgtcgt tttaggtgag ttgttaataa
    12961 agatttggaa ttgtgacaca gtgcaaattc agacacataa aaaaacgtca tcgcttgcat
    13021 tagaaaggtt tctggccgac cttataacca ttaattacga agcgcaaaaa aaataatatt
    13081 tcctcatttt ccacagtgaa gtgattaact atgctgattc cgtcaaaact aagtcgtccg
    13141 gttcgactcg accataccgt ggttcgtgag cgcctgctgg ctaaactttc cggcgcgaac
    13201 aacttccggc tggcgctgat cacgagtcct gcgggctacg gaaagaccac cctcatttcc
    13261 cagtgggcgg caggcaaaaa cgatatcggc tggtactcgc tggatgaagg tgataaccag
    13321 caagagcgtt tcgccagcta tctcattgcc accgtgcagc aggcaaccaa cggtcactgt
    13381 gcgatatgtg agacgatggc gcaaaaacgg caatatgcca gcctgacgtc actcttcgcc
    13441 cagcttttca ttgagctggc ggaatggcat agcccacttt atctggtcat cgatgactat
    13501 catctgatca ctaatccagt gatccacgag tcaatgcgct tctttattcg ccatcaacca
    13561 gaaaatctca ccctggtggt gttgtcacgc aaccttccgc aactgggcat tgccaatctg
    13621 cgtgttcgtg accaactgct ggaaattggc agtcagcaac tggcatttac ccatcaggaa
    13681 gcgaagcagt tttttgattg ccgtctgtca tcgccgattg aagccgcaga aagcagtcgg
    13741 atttgcgatg acgtttccgg ttgggcgacg gcactacagc taatcgccct ctccgcccgg
    13801 cagaataccc actcagccca taagtcggca cgccgcctgg cgggaatcaa tgccagccat
    13861 ctttcggatt atctggtcga tgaggttttg gataacgtcg atctcgcaac gcgccatttt
    13921 ctgttgaaaa gcgccatttt gcgctcaatg aacgatgcgc tcatcacccg tgtgaccggc
    13981 gaagaaaacg ggcaaatgcg tctcgaagag attgagcgtc aggggctgtt tttacagcgg
    14041 atggatgata ccggcgagtg gttctgctat cacccgctgt ttggcaactt cctgcgccag
    14101 cgctgccagt gggaactggc ggcggagctg ccggaaatcc accgtgccgc cgcagaaagc
    14161 tggatggccc agggatttcc cagcgaagcg attcatcatg cgctggcggc aggcgatgcg
    14221 ctgatgctgc gcgatattct gcttaatcac gcctggagtt tgttcaacca tagcgaactg
    14281 tcgctgctgg aatagtcgct taaggccctg ccgtgggaca gtttgctgga aaatccgcag
    14341 ttagtgttat tgcaggcgtg gctaatgcaa agccaacatc gctatggcga agttaacacc
    14401 ctgctagccc gtgctgaaca tgaaatcaag gacatcagag aaggcaccat gcacgcagaa
    14461 tttaacgctc tgcgcgccct ggtggcgatt aacgatggta atccggatga agcggaacgg
    14521 ctggcaaaac tggcactgga agagctgcca ccgggctggt tctatagccg cattgtggca
    14581 acctcggtgc tgggtgaagt gctgcactgc aaaggcgaat tgacccgctc actggcgcta
    14641 atgcagcaaa ccgaacagat ggcacgccag cacgacgtct ggcactacgc cttatggagt
    14701 ttaatccagc aaagtgaaat tctgtttgcc caagggttcc tgcaaaccgc gtgggaaaca
    14761 caggaaaaag cgttccagct gatcaacgag cagcatctgg aacagctgcc gatgcatgag
    14821 tttctggtgc gcatccgagc acaactgtta tgggcctgag cacggctgga tgaagccgaa
    14881 gcgtcggcgc gtagcgggat tgaagtcttg tcgtcttatc agccacagca acagcttcag
    14941 tgcctggcaa tgttgattca atgctcgctg gcccgtggtg atttagataa cgcccgtagc
    15001 cagctgaacc gtctggaaaa cctgctgggg aatggcaaat atcacagcga ctggatctct
    15061 aacgccaaca aagtccgggt gatttactgg caaatgaccg gcgataaagc cgccgctgcc
    15121 aactggttgc gtcatacggc taaaccggag tttgcgaaca accacttcct gcaaggtcaa
    15181 tggcgcaaca ttgcccgcgc acaaatcttg ctgggcgagt ttgaacctgc ggaaattgtt
    15241 ctcgaagaac tcaatgaaaa tgcccgcagt ctgcggttga tgagcgatct caaccgtaac
    15301 ctgttgctgc ttaatcaact gtactggcag gccggacgta aaagtgacgc ccagcgcgtg
    15361 ttgctggacg cattaaaact ggcgaatcgc accggattta tcagtcattt tgtcatcgaa
    15421 ggcgaagcga tggcgcaaca actgcgccag ctgattcaac tcaatacgct gccggaactg
    15481 gaacagcatc gcgcgcagcg tattctgcga gaaatcaatc aacatcatcg gcataaattc
    15541 gcccatttcg atgagaattt cgttgaacgt ctgctaaatc atccggaagt gccagaactg
    15601 atccgcacca gcccgttgac ccaacgtgaa tggcaggtcc tggggctgat ctactccggt
    15661 tacagcaatg agcaaattgc gggcgagctg gaagtggcgg caaccaccat caagacgcat
    15721 atccgcaatc tgtaccaaaa actcggcgtc gcccaccgtc aggccgcggt acaacacgcg
    15781 cagaaactgc tgaagatgat gggatatggg gtgtgagttt agccggataa tgcattggat
    15841 ccggtttaca tctttacatc attcaatact cacccgcgtt acgccatctg tttctatcaa
    15901 accaaaccgc accggcaaga aacgctccac cacggcgata ttggtcagca gatggcatga
    15961 aggatgggcg accgtaaatt ctcccgcgcc cgccagcgcc atcggtagca ccagctggtc
    16021 ggcgagatat tcccccactg ccgccgggct tgccaggtag cgtttcacct ctttcactaa
    16081 ctgcgcggct accacctcgg cactgacgcg cttttcaccg acgacgaaaa agcgttcagt
    16141 gatattttca ctttcgactt ccagcgagac ggtattaccc ggcccctggt cgcgcggcag
    16201 gttatgaata ttctgttcat gcagggaaaa actccccgcc agtgtagcga tttcacgctc
    16261 agcaacatgg cgcggcacac cagctaatag aacttctcca cgcatctgca caatgttccc
    16321 gcgctcgcca agttgcaagg tgttaaacga tgccacgggc gagacttccg ttgccaccac
    16381 gccgcctccg gcaggataaa aaccgtgacg taacagcgtg gtttgctgat gaattcctat
    16441 tttcgccagc agcggctcca gcacccggcg gataaaatcc gcaggcggcg ccgacgggtt
    16501 atcggtgcct ccgctcactt caacacgcga aggtccatcg gcaaaccaca gcgcgggcag
    16561 caccgtttgc agcaccagcg tacagcttcc ggcactaccg atagcaaagc ggtactcgcc
    16621 gccgcgcacg gcgccaggcc ggaagaccag acgctgcgac cccagctccg cgccttccac
    16681 cgttgcccta caaatttccg cagccgcttt taccgcggtc agatgctggc gcaacagccc
    16741 cggtttcgcc cgcccggcac gaatgctggt gatggtaaat ggctggccgg ttatcatcga
    16801 caggctcagc gccgcgcgca gaatctgccc gccaccttcg ccctgtgcgc catccagcgc
    16861 aatcatcctt ttcatcattt atccttttac gcacaccacc tgacgcaggg tatagataac
    16921 ttccaccaga tcgctttgtg ccgtcatcac cgcatcaata tctttatacg ccatcgggat
    16981 ttcgtcgatc acttcggcat ctttacggca ttccacatgc gcggtggcac gaatttgatc
    17041 ttccacgctg aacagttttt tcgctttagt tcggctcatt acccgcccgg caccgtggct
    17101 gcacgaacag aacgactctt catttcccag cccacggacg ataaagcttt ttgctcccat
    17161 cgaaccggga ataattccat attgaccagc acgcgcagac accgcgcctt tacgcgtcac
    17221 gtagatctct tcaccaaagt gctgttcttt ttgcacatag ttgtggtgac agttgatctc
    17281 ttccatcgcc agcgtttgtg gctgtctgac cgttttctgc gtaatgctct gcaatgccgt
    17341 taccacgttt tccatcatcg catcgcggtt aaggctggca aaaagctgcg cccaggccac
    17401 ggctttcagg taatcatcaa agtattccgt accttccata aagtacgcca gatcacgcga
    17461 cggcaacgtc tcaagcgttt cctgcatctc tttttgtgcc agatcgataa agtaagtccc
    17521 gatggcgtta ccaattccgc gtgaaccgga gtgcagcata atccacacct ggtccgactc
    17581 atcaaggcag attttaataa agtggttacc ggttcccagc gttcccaggt gtttatagtt
    17641 attggtattc aggaaacggg gatatttttg cgttaaccac tgataaccgg cttcaagctc
    17701 agcccatttc gcatcgacgt taacaggcgg gttttcccat gcgcctttat cacgtttaca
    17761 acgcccggta gtacgcccgt gcggcacggc cgtttcaatc gcctgacgca gctctgccag
    17821 gttttcaggc aggtcttccg ccgttaacgc ggtacgcagc gcgttcattc cacagccaat
    17881 atccacgccc accgccgccg gaataatcgc ccctttggtc gggatcacgc taccaatggt
    17941 ggaatcttta cccaggtgta catcaggcat taccgcaata tgtttgaaaa taaacggcat
    18001 cttcgccgta ttaataagtt gctgacgcgc atcggcttct accggcacgc ctttggtcca
    18061 catttttacc ggggcatttt cagtggtcag taattcgtaa ttcattttgt ttttctcttt
    18121 tcgttgtttg ctgtcctgat aattgcaacc gtcg
//
LOCUS       DADMHC010000067        17715 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.067, whole genome shotgun sequence.
ACCESSION   DADMHC010000067 DADMHC010000000
VERSION     DADMHC010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17715)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17715)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17715
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.067"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            6..866
                     /gene="pdxY"
                     /locus_tag="JNZ57_001939"
     CDS             6..866
                     /gene="pdxY"
                     /locus_tag="JNZ57_001939"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310372.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase PdxY"
                     /protein_id="HAY8828169.1"
                     /translation="MKNILAIQSHVVYGHAGNSAAEFPMRRLGANVWPLSTVQFSNHT
                     QYGKWTGCVMPPSHLTEIVQGIAAIDKLHTCDAVLSGYLGSAEQGEHILGIVRQVKAA
                     NPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVELEILCEHAVNNV
                     EEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQP
                     VGVGDVTSGLLLVKLLQGATLQEALEHVTAAVYEIMVTTKAMQEYELQVVAAQDRIAK
                     PEHYFSATKL"
     gene            complement(910..1515)
                     /gene="gstA"
                     /locus_tag="JNZ57_001940"
     CDS             complement(910..1515)
                     /gene="gstA"
                     /locus_tag="JNZ57_001940"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione transferase GstA"
                     /protein_id="HAY8828170.1"
                     /translation="MKLFYKPGACSLASHITLRESGKDFTLVSVDLMKKRLENGDDYF
                     AVNPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVNSISRYKTIEWLNYIA
                     TELHKGFTPLFRPDTPEEYKPTVRAQLEKKLQYVNEALKDEHWICGQRFTIADAYLFT
                     VLRWAYAVKLNLEGLEHIAAFMQRMAERPEVQDALSAEGLK"
     gene            complement(1621..3123)
                     /gene="dtpA"
                     /locus_tag="JNZ57_001941"
     CDS             complement(1621..3123)
                     /gene="dtpA"
                     /locus_tag="JNZ57_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/tripeptide permease DtpA"
                     /protein_id="HAY8828171.1"
                     /translation="MSTANQKPTESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIM
                     AVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGY
                     ALVAWSGHDAGIVYMGMAAIAVGNGLFKANPSSLLSTCYEKNDPRLDGAFTMYYMSVN
                     IGSFFSMIATPWLAAKYGWSVAFALSVVGLLITIVNFAFCQRWVKQYGSKPDFEPINY
                     RNLLLTIIGVVALIAIATWLLHNQEVARMALGVVAFGIVVIFGKEAFAMKGAARRKMI
                     VAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGLAVEPEQYQALNPFWIIIGSP
                     ILAAIYNKMGDTLPMPTKFAIGMVMCSGAFLILPLGAKFASDAGIVSVSWLVASYGLQ
                     SIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGANLIGGYVAGMMAVPDNVTDP
                     LMSLEVYGRVFLQIGVATAIIAVLMLLTAPKLHRMTQDDAADKAAKAAVA"
     gene            complement(3734..4369)
                     /gene="nth"
                     /locus_tag="JNZ57_001942"
     CDS             complement(3734..4369)
                     /gene="nth"
                     /locus_tag="JNZ57_001942"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HAY8828172.1"
                     /translation="MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATD
                     VSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNG
                     EVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVE
                     EKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKVDI"
     gene            complement(4369..5064)
                     /locus_tag="JNZ57_001943"
     CDS             complement(4369..5064)
                     /locus_tag="JNZ57_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit E"
                     /protein_id="HAY8828173.1"
                     /translation="MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLA
                     TTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFI
                     PLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDG
                     ADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRTEAA
                     AERALPNGETGNV"
     gene            complement(5068..5688)
                     /gene="rsxG"
                     /locus_tag="JNZ57_001944"
     CDS             complement(5068..5688)
                     /gene="rsxG"
                     /locus_tag="JNZ57_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxG"
                     /protein_id="HAY8828174.1"
                     /translation="MLKTIRKHGITLALFAAGSTGLTAAINQMTKTTIAEQASLQQKA
                     LFDQVLPAERYNNALAQSCYLVTAPELGKGEHRVYIAKQDDKPVAAVLEATAPDGYSG
                     AIQLLVGADFNGTVLGTRVTEHHETPGLGDKIELRLSDWITHFAGKKISGADDAHWAV
                     KKDGGDFDQFTGATITPRAVVNAVKRAGLYAQTLPAQLSQLPACGE"
     gene            complement(5692..6750)
                     /gene="rsxD"
                     /locus_tag="JNZ57_001945"
     CDS             complement(5692..6750)
                     /gene="rsxD"
                     /locus_tag="JNZ57_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxD"
                     /protein_id="HAY8828175.1"
                     /translation="MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTL
                     VQILLASVSTLLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGT
                     VFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQ
                     VIFSGHTASGADMNTLHLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGA
                     GWQWVNLAWLAGGLWLLWQKAIRWHIPLSFLVTLALCATLGWLFSPETLAAPQIHLLS
                     GATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANIT
                     VPLIDYYTRPRVYGHRKG"
     gene            complement(6751..8877)
                     /gene="rsxC"
                     /locus_tag="JNZ57_001946"
     CDS             complement(6751..8877)
                     /gene="rsxC"
                     /locus_tag="JNZ57_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxC"
                     /protein_id="HAY8828176.1"
                     /translation="MLKLFSAFRKNKIWDFNGGIHPPEMKTQSNGTPLRQVPLAQRFV
                     IPLKQHIGAEGELCVSVGDKVLRGQPLTRGRGKMLPVHAPTSGTVTAIAPHSTAHPSA
                     LAELSVIIDADGEDCWIPRDGWADYRTRSREELIERIHQFGVAGLGGAGFPTGVKLQG
                     GGDKIETLIINAAECEPYITADDRLMQDCAAQLVEGIRILAHILQPREILIGIEDNKP
                     QAISMLRAVLADSNDISLRVIPTKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNV
                     GTAYAVKRAVIDGEPITERVVTLTGEAIARPGNVWARLGTPVRHLLNDARFCPSADQM
                     VIMGGPLMGFTLPWLDVPVVKITNCLLAPSANELGEPQEEQSCIRCSACADACPADLL
                     PQQLYWFSKGQQHDKATTHNIADCIECGACAWVCPSNIPLVQYFRQEKAEIAAIRQEE
                     KRAAEAKARFEARQARLEREKAARLERHKSAAVQPAAKDKDAIAAALARVKEKQAQAT
                     QPIVIKAGERPDNSAIIAAREARKAQARAKQAELQQTNDAATVADPRKTAVEAAIARA
                     KARKLEQQQANAEPEEQVDPRKAAIEAAIARAKARKLEQQQANAEPEEQVDPRKAAVE
                     AAIARAKARKLEQQQANAVPEEQVDPRKAAVEAAIARAKARKLEQQQTNAEPEEQVDP
                     RKAAVAAAIARAQAKKAAQQKVVNED"
     gene            complement(8870..9448)
                     /gene="rsxB"
                     /locus_tag="JNZ57_001947"
     CDS             complement(8870..9448)
                     /gene="rsxB"
                     /locus_tag="JNZ57_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxB"
                     /protein_id="HAY8828177.1"
                     /translation="MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDKIL
                     PQSQCAQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQE
                     LTPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTH
                     CISLQPVAETPDSWKWDLNTIPVRIIPVEHHA"
     gene            complement(9448..10029)
                     /gene="rsxA"
                     /locus_tag="JNZ57_001948"
     CDS             complement(9448..10029)
                     /gene="rsxA"
                     /locus_tag="JNZ57_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017456621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxA"
                     /protein_id="HAY8828178.1"
                     /translation="MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLA
                     TTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRL
                     LGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAV
                     ADVPAPFRGNAIALITAGLMSLAFMGFSGLVKL"
     gene            complement(10106..10546)
                     /locus_tag="JNZ57_001949"
     CDS             complement(10106..10546)
                     /locus_tag="JNZ57_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707526.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2569 domain-containing protein"
                     /protein_id="HAY8828179.1"
                     /translation="MTTTTPQRIGGWLLGPLAWLLVALLSTTLALLLYTAALSSPQTF
                     QTLGGQALTTQILWGVSFITAIAMWYYTLWLTIAFFKRRRCVPKHYIIWLLISVLLAV
                     KAFAFSPVEDGIAVRQLLFTLLATALIVSYFKRSSRVKATFVNP"
     gene            complement(10632..10847)
                     /gene="ydgT"
                     /locus_tag="JNZ57_001950"
     CDS             complement(10632..10847)
                     /gene="ydgT"
                     /locus_tag="JNZ57_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription modulator YdgT"
                     /protein_id="HAY8828180.1"
                     /translation="MTVQDYLLKFRKISSLESLEKLYDHLNYTLTDDQELINMYRAAD
                     HRRAELVSGGRLFDLGQVPKSVWHYVQ"
     gene            complement(11120..11245)
                     /gene="blr"
                     /locus_tag="JNZ57_001951"
     CDS             complement(11120..11245)
                     /gene="blr"
                     /locus_tag="JNZ57_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division septum protein Blr"
                     /protein_id="HAY8828181.1"
                     /translation="MNRLIELTGWIVLVVSVILLGVASHIDNYQPPEQSASVQHK"
     gene            11488..12528
                     /locus_tag="JNZ57_001952"
     CDS             11488..12528
                     /locus_tag="JNZ57_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310359.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HAY8828182.1"
                     /translation="MSDNIRVGLIGYGYASKTFHAPLIAGTPGLELAVISSSDETKVK
                     ADWPTVTVVSEPKHLFNDPNIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLS
                     QARELDALAKSLGRVLSVFHNRRWDSDFLKLKGLLAEGVLGEVAYFESHFDRFRPQVR
                     DRWREQGGPGSGIWYDLAPHLLDQAITLFGLPVSMTVDLAQLRPGAQSTDYFHAILSY
                     PQRRVILHGTMLAAAESARYIVHGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRD
                     GVLTRVEGEERVEETLLTVPGNYPAYYAAIRDALNGDGENPVPASQAIQVMELIELGI
                     ESAKHRATLCLA"
     gene            complement(12563..13564)
                     /gene="add"
                     /locus_tag="JNZ57_001953"
     CDS             complement(12563..13564)
                     /gene="add"
                     /locus_tag="JNZ57_001953"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HAY8828183.1"
                     /translation="MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAQSLETLI
                     PHVQVIANEPDLVSFLTKLDWGVKVLASLDACRRVAFENIEDAARNGLHYVELRFSPG
                     YMAMAHKLPVAGVVEAVIDGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHR
                     DQITALDLAGDELGFPGSLFLSHFNLARDAGWHITVHAGEAAGPESIWQAIRELGAER
                     IGHGVKAIEDRALMDFLAEQQIGIESCLTSNIQTSTVAELAAHPLKTFLEHGIRAGIN
                     TDDPGVQGVDIIHEYTVAAPAAGLSREQIRQAQINGLEMAFLSAEEKRALREKVAAK"
     gene            complement(13668..14840)
                     /gene="malY"
                     /locus_tag="JNZ57_001954"
     CDS             complement(13668..14840)
                     /gene="malY"
                     /locus_tag="JNZ57_001954"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional maltose regulon transcriptional
                     repressor/cystathionine beta-lyase MalY"
                     /protein_id="HAY8828184.1"
                     /translation="MFDFSKVVDRHGTWCTQWDYVADRFGTADLLPFTISDMDFATAP
                     CIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSE
                     LIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK
                     PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWS
                     NVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTA
                     HIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNID
                     DNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR"
     gene            complement(14850..16441)
                     /locus_tag="JNZ57_001955"
                     /pseudo
     CDS             complement(14850..16441)
                     /locus_tag="JNZ57_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416138.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS maltose transporter subunit IICB"
     gene            16616..17644
                     /locus_tag="JNZ57_001956"
     CDS             16616..17644
                     /locus_tag="JNZ57_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mal regulon transcriptional regulator MalI"
                     /protein_id="HAY8828185.1"
                     /translation="MATAKKITIHDVALAAGVSVSTVSLVLSGKGRISTATGERVNAA
                     IEELGFVRNRQASALRGGQSGVIGLIVRDLSAPFYAELTAGLTEALEAQGRMVFLLHG
                     GKDGEQLAQRFSLLLNQGVDGVVIAGAAGSSDDLRRMAEEKAIPVIFASRASYLDDVD
                     TVRPDNMQAAQLLTEHLIRNGHQRIAWLGGQSSSLTRAERVGGYCATLLKFGLPFHSD
                     WVLECTSSQKQAAEAITALLRHNPTISAVVCYNETIAMGAWFGLLKAGRQSGESGVDR
                     YFEQQVSLAAFTDATPTTLDDIPVTWASTPARELGTTLADRMMQKITHEETHSRNLII
                     PARLIAAK"
BASE COUNT         4528 a         4503 c         4544 g         4140 t
ORIGIN      
        1 acatgatgaa aaatattctc gctatccagt ctcacgttgt ttatggtcat gcgggtaaca
       61 gtgcggcaga gtttcctatg cgccgcctgg gcgcgaacgt ctggccgctg agcaccgttc
      121 aattttctaa tcacacccag tacggcaaat ggactggctg cgtgatgccg cccagccatt
      181 taaccgaaat tgtgcaaggc attgccgcca ttgataaatt acacacctgt gatgccgtgt
      241 taagtggcta tctgggatcg gcggagcagg gtgaacatat cctcggtatc gtccgtcagg
      301 tgaaagccgc gaatccgcag gcgaaatatt tttgcgatcc ggtaatgggt catccggaaa
      361 aaggctgtat cgttgcaccg ggtgtcgcag agtttcatgt gcggcacggt ttgcctgcca
      421 gcgatatcat tgcgccgaat ctggttgagc tggaaatact ctgtgagcat gcggtaaata
      481 acgtcgaaga agcggttctg gcagcgcgcg aactcattgc gcaagggcca caaattgtgt
      541 tggttaaaca cctggcgcga gctggctaca gccgtgaccg ttttgaaatg ctgctggtca
      601 ccgccgatga agcctggcat atcagccgtc cgctggtgga ttttggtatg cgccagccgg
      661 taggtgttgg tgatgtgacg agcggtttac tgctggtgaa actgcttcag ggggcaacgc
      721 tgcaggaggc gctggaacat gtgaccgctg cagtctacga aatcatggtg accaccaaag
      781 caatgcagga atatgagctg caagtggtgg ctgctcagga tcgtattgcc aaaccagaac
      841 attacttcag cgcaacaaag ctctgaaata tctcatttcg gcccacaacg acctgtgggc
      901 cgatggctat tactttaagc cttccgctga cagcgcgtct tgtacttccg gacgttcagc
      961 catacgttgc ataaatgctg caatgtgctc taacccttcc agattcagtt tcaccgcgta
     1021 tgcccagcgc agaaccgtaa acagataggc atcagcaatt gtaaatcttt gcccgcagat
     1081 ccagtgctca tccttcagtg cctcgttcac atattgcagc ttcttctcca gctgcgcgcg
     1141 aactgtcggt ttgtactctt ccggtgtatc agggcgaaac agaggtgtga aacctttatg
     1201 cagctcggtg gcgatgtaat tcagccattc gatggtttta tagcgggaaa tactgtttac
     1261 cggtgccagc aactggcggt cggggacgct gtcggcaaga tactgcataa tcgctacgcc
     1321 ttccgtcagc aaagtaccgt catccagcag caatgcaggc acctgcccct tagggttaac
     1381 ggcaaagtaa tcgtcaccgt tttcgagacg ttttttcatt aaatccacac tgacgagggt
     1441 aaaatccttt ccgctctcac gcagggtgat atgggaagcg agagagcagg cacccggttt
     1501 gtagaacaat ttcatcggta actccttttg tctgtggttt aaagtatggt agtgcgttgc
     1561 tgaacaaaaa aaaagccgct aacgaaaagt tagcggcttg taaaagagtt tccctgaatt
     1621 ttacgctaca gcagctttcg ccgctttgtc tgcagcgtca tcctgcgtca tacggtgcag
     1681 tttaggcgcg gtcagcagca tcagtactgc aataatggca gtagcgacac caatctgcaa
     1741 gaatacgcga ccataaactt ccagtgacat cagcgggtcg gtaacgttat ccggcacagc
     1801 catcataccc gcaacataac caccaatcag gtttgcaccg gcagtggtca ggaaccagct
     1861 acccataatg aagcccatca gacgctgcgg aacgagttgt gcaaccattg ccagacccag
     1921 accagagatc atcagttccc cgatgctctg caggccatag cttgcgacca gccagcttac
     1981 agacacgata ccagcgtcag acgcgaattt cgcacccagc ggcagaatca ggaacgcacc
     2041 agaacacatc accatgccga ttgcaaactt ggttggcatc ggcagggtat cgcccatctt
     2101 gttatagata gcggccagaa tcggactacc gatgatgatc cagaacgggt tcagtgcctg
     2161 atactgctca ggttctacgg ccagacccag aatggagtgc tcaacgttac gaatcgcaaa
     2221 gaagttcagt gacgttggca tctggctgta cagcacgaag aagataatgg cttcgagcat
     2281 caggatgaag gcaacgatca ttttacgacg cgcagcacct ttcatcgcga aggcttcttt
     2341 accgaagata accacgatac cgaaggcaac aacgcccagc gccatacgcg caacttcctg
     2401 attgtgcagc agccaggtgg cgatagcgat cagtgccaca acaccaataa tggtcagcag
     2461 caggttacgg tagttgatag gctcgaagtc tggttttgaa ccgtactgtt taacccagcg
     2521 ttggcagaag gcgaagttaa cgatagtgat cagcaggcct acaacgctca acgcaaacgc
     2581 aacactccag ccgtatttcg cggccagcca cggcgtagca atcatagaga agaaagagcc
     2641 gatgttgacg gacatgtagt acatggtgaa tgcaccgtcc agacgcgggt cgtttttctc
     2701 atagcatgta gaaagcagag aagacgggtt agctttaaac aggccgttac cgaccgcaat
     2761 agccgccata cccatataaa cgataccggc gtcgtgacca gaccaggcaa ccagagcata
     2821 accaatcgcc agcacaatag cgccgagcat aattacgcgt ttagtaccca gtactttgtc
     2881 acctaaccag ccgccgatag cgaccagacc ataaaccagg gcactaaagg aagagaaaag
     2941 ggtgattgaa tccgcttcag acatacccag ttgtttaacc aggtaaacag ccataattcc
     3001 ttgtaggccg taataaccaa aacgttccca taactcaatc gagaagatga gatagaacgc
     3061 cttcggttgt ttgaaagcgt tcaaactgac gctttcagtt ggtttttggt ttgcagtgga
     3121 cactttgacc tcttttttta catcccatat taacgggggt gctttctcgc gttatgtcta
     3181 aaaaacatac gcgcaattgt tatagtggga ggggaaacgg caggtaatgt tcactatctt
     3241 gcactttcag acaagtcctt tgtaataatc tgttacatat aactgaggcg gggaattcaa
     3301 ccattccggg aaatgttatc cagcgttaaa tttttcaaaa aacgtaacgg cagatttttt
     3361 cactgcactg agagggggat gatggcttaa cggcgatatg ttctgctatt tagcgttttt
     3421 gctagtgaga taatccagtt tctgaaaaat agccagtgta atgttttgta ggtcaatatt
     3481 tgttgcgtgt gtaaatttaa atgattttaa cctgattatt gcaatgtttt tacattgcga
     3541 cagcatcgtg atcttgatca cgaatgaata gaaaatttcg ctattaaaaa aacaattaac
     3601 ctgcattttt ggttatccgc aaacggatta cctgatgata acgctaagca atggcatcat
     3661 tcacgttaaa aagatgtttt aaaagaggat aaagaaaggt tatcaatggg gtaatcggtg
     3721 ttaccccttt tcttcagatg tcaactttct ctttgtattc acaaagatct tcaataatac
     3781 aagagccaca gcggggcttg cgggcaatgc aggtataacg cccgtgcagg atcaaccaat
     3841 ggtggcagtc gactttaaac tctgccggaa ccactttcag tagcttttct tctacctgtt
     3901 caacgttttt ccccggcgca aattgagtac gattacaaac gcggaaaatg tgcgtgtcga
     3961 cagcaatagt cggccagccg aatgcagtgt ttaatacgac gttggctgtt ttacgaccta
     4021 cgccgggcag ggcttcaagc gcagcacgat cttccggaac ctcgccatta tgctgctcca
     4081 gtaagatacg gcaggttttg atgatatttt ctgctttgct gttataaagc ccaatcgttt
     4141 tgatataggt tttaacccct tcaacgccca gttcaagcat cgctgcaggc gtattcgcca
     4201 ccgggtagag tttcgccgtc gccttattaa cactgacatc ggtcgcctga gcggaaagca
     4261 gtacggcaat cagcaattca aaaggcgaac tgaaattaag ctcggtggtg ggatgaggat
     4321 tgttctcacg caggcgagtg aggatctcca ggcgttttgc tttgttcatc agacattccc
     4381 tgtttcaccg tttggcaatg cacgttcggc agctgcttca gtacggcgct ttttcattct
     4441 ttcatcaatc aggtattttc ctgccagcat cagtcccagg ccaataaatg cacctggtgg
     4501 cagcatcgcc agcaggaaag gggagtcggt gtggaaaatc tccacgcgta atacttttgc
     4561 ccagctacct aacagcgcat ctgcaccgtc aaacaatgtg ccattgccga taatttcgcg
     4621 tagtgaaccc agcacgaaca tggcgcaggt tgcgcccata ccaattgaaa agccgtccag
     4681 tgccgaaagc gccggacctt ttttggcggc gaaggcttca gcgcggccca caacgataca
     4741 gttagtgaca atcagcggaa taaaaatccc taatgattga tacaggccaa aggcgtaggc
     4801 gttgatcagc atctgtacag cgctgaccac cgaggcgatg atcatcacgt aaatgggaat
     4861 gcggatctcg gctggcgtcc agtgacgcag cgtcgaaatg gtcaggttgg tcagcgtcag
     4921 taccagcgta gtcgcaagtc ctaaacccag agcattagtg gcagtggacg tgaccgccaa
     4981 cagaggacaa aggccgagca actggaccag cgcagagttg tttttccaca acccctgaac
     5041 aataacgtct ttaatttcgc tcacgcttta ttctccacag gcaggaagtt gagaaagttg
     5101 tgccggtaac gtctgagcgt acaatccggc gcgttttacc gcattaacca ccgcgcgggg
     5161 agtaatcgtc gcgccggtga actggtcgaa atcaccacca tctttcttca ccgcccagtg
     5221 cgcatcatcc gcaccactga tttttttacc cgcaaaatgg gtgatccagt cagaaaggcg
     5281 cagttcgatt ttatcgccaa gccctggcgt ttcgtggtgc tctgtcacgc gcgtgccaag
     5341 taccgtgccg ttaaaatcgg ctcccaccag cagctgaatc gcaccggaat agccatctgg
     5401 cgcggttgct tccagaacgg cggctaccgg tttgtcatcc tgtttggcga tgtaaacccg
     5461 atgctcacct ttacctaact ctggcgcagt taccagatag caactctgtg ccagcgcatt
     5521 gttatagcgt tcggctggca gcacctgatc aaataatgcc ttttgttgca gacttgcctg
     5581 ttcagcaatc gtcgttttgg tcatctggtt gatggccgca gttaaccctg ttgaacccgc
     5641 tgcaaatagc gctaacgtaa tgccgtgttt tcggatagtt ttcagcatgg tttacccttt
     5701 gcgatggccg tagacgcgcg gacgcgtgta gtaatcgatc agaggaaccg tgatgttcgc
     5761 cagcaggacg gcaaaagcca cgccgtcagg atagccgccg aaactgcgga tcaaccagac
     5821 taataagccc gcaagcgcgc cgaaaataag acgaccacga ttggtcgtag aagcggtaac
     5881 cgggtcagtc aaaataaaga atgcgccgag catggtcgca ccagacagca gatgaatttg
     5941 cggtgctgcc agtgtttctg gtgagaacaa ccagcccaac gttgcgcata acgccagcgt
     6001 tactaagaag ctgaggggaa tatgccagcg aatcgctttc tgccatagca accacaggcc
     6061 gccagccagc caggcgagat ttacccattg ccaaccagcg cccgccagaa taccgctgta
     6121 gatcggatat tgcataatct gttcaaccga atgaccggca cggacagagg ttttaaatgt
     6181 atccagcggt gtcgcctgac taatgccatc aatacctaag tgtagtgtgt tcatatcagc
     6241 accactggcg gtatgcccgc tgaaaataac ctgtatggcg tcgataaaac cagggatgtt
     6301 gaccgcaatt tcatgtggcg gtaaccagct ggtcatctgc accgggaagg agatcagtaa
     6361 gaccacataa ccaatcattg ccggattaaa cgggttttgc cccagaccgc catacaactg
     6421 tttagcgatg atcaccgcaa acaccgtacc cagcacgacc atccaccatg gcgcgagggg
     6481 gggaatactt accgccagca ataagcctgt cagcaatgct gagttatctt tcaacgttgc
     6541 ggctaccgac tgcttgcgta gtttgagtac gagagcttcg gctaacagag tactaaccga
     6601 tgccaacagg atctgaacga gagtacccca accaaaaaac cacagttgcg ctgcgattcc
     6661 tggcacggct gcgagcaaca ccaacagcat aatgcgcgat gtctggcgct ggttatgggt
     6721 ataaggggag ctagctattc tgaataccat ttagtcctcg tttacaacct tttgctgggc
     6781 ggcttttttg gcctgagcgc gggcaatagc cgcggcaact gccgctttgc gcggatcaac
     6841 ctgttcttct ggttctgcgt tagtctgttg ctgttccagc ttgcgcgctt tggcacgggc
     6901 aatagcggct tcgacggcgg ctttgcgcgg atcaacctgt tcttcaggta ccgcattagc
     6961 ctgttgctgt tccagcttgc gtgctttggc gcgtgcaata gccgcttcga cggccgcttt
     7021 gcgcggatca acctgttctt ctggctccgc attagcctgt tgctgttcca gtttgcgcgc
     7081 tttggctcgg gcaatagcgg cttcgatggc ggctttgcgc ggatcgacct gttcttctgg
     7141 ttccgcatta gcctgttgct gttccagctt gcgcgctttg gcgcgggcga tagctgcttc
     7201 aacggcagtt ttacgtggat cagcaacggt tgctgcgtcg ttagtttgct gcagttctgc
     7261 ctgtttcgct ctggcttgcg ctttacgggc ttcccgtgct gcaataattg cactgttatc
     7321 cgggcgttcg cccgctttaa tcacaatagg ctgtgtagcc tgggcctgtt tctctttcac
     7381 ccgcgccaga gcggcagcaa tcgcatcttt atctttggct gcaggttgaa cggctgcgct
     7441 cttatgtcgt tcaaggcgag ccgctttttc gcgctccaga cgagcctggc gcgcttcgaa
     7501 acgcgctttg gcttctgcgg cgcgcttttc ttcctgacga atagccgcaa tttcagcttt
     7561 ttcctgacgg aaatattgca ccaggggaat attgctcggg caaacccacg cgcaagcccc
     7621 acattcaatg caatcagcaa tgttatgcgt ggtagcttta tcgtgttgct gacctttgct
     7681 gaaccagtac aactgttgcg gcaaaagatc cgcagggcag gcgtcagcac aggcgctaca
     7741 ccggatgcag ctttgttctt cctgtggttc gccaagttca ttggcagagg gagccaacag
     7801 acagttggta atctttacga ccgggacatc cagccatggc aaggtaaagc ccattagcgg
     7861 gccacccata atcaccattt gatcggcaga ggggcagaat cgggcatcat tcaataaatg
     7921 acgcactggc gtccccagcc gtgcccagac gttgcccggg cgagcgattg cttcgccagt
     7981 cagggttaca acacgctcgg taatcggctc gccatcaata acggcacgtt tcactgcata
     8041 agcagtgccg acgttttgca ttaatacgcc gatatcggat gaacgcccgc catgtggaac
     8101 ctgcttcccg gtcagaatgt aggttaattg tttagcaccg ccagaaggat atttggttgg
     8161 aatcacccgc agagaaatat cgttagagtc cgccagcacc gcgcgcagca tggaaatcgc
     8221 ctgcggtttg ttatcttcaa tgccgataag aatttcgcgt ggctgcagaa tatgcgcaag
     8281 aatgcgaata ccctctacga gctgagccgc gcaatcctgc atcaaacggt catcggcggt
     8341 aatgtacggc tcgcactcag ccgcgttgat aatcaacgtt tcaatcttat ctccgccacc
     8401 ctgcaattta acgcctgtcg ggaatcctgc accgcccagc ccggcaacac caaactgatg
     8461 tatgcgctcg attaactctt cgcgactgcg agtgcgataa tcggcccagc cgtcgcgcgg
     8521 gatccagcag tcttcaccat cggcatcaat aatcacgctt aattcagcta aagctgaagg
     8581 atgagccgta gagtggggcg caatagccgt aacggtaccc gaggtgggcg cgtgaacagg
     8641 cagcattttg ccgcgaccac gggtaagcgg ctggccgcgc aatactttat cgccgacgct
     8701 aacgcacaac tcaccttcag cgccaatatg ctgtttcagt ggaataacaa aacgctgcgc
     8761 cagtggtacc tggcgcaggg gtgtaccgtt ggactgggtt ttcatctccg gtggatggat
     8821 gccgccgttg aaatcccaga ttttattttt tctgaatgca gagaataact taagcatggt
     8881 gttccacggg aatgatacgc acgggaatgg tgttcagatc ccatttccag gagtcaggtg
     8941 tttctgcgac cggttgcaac gagatgcagt gcgtcgggca cggatcaaca cataaattgc
     9001 agcccgtaca gagatcactc attaccgtat gcatggcacg ggtagcgcca acgatggcgt
     9061 ctaccggaca agcctgaata catttagtgc agccaataca gttattttca tcaataaccg
     9121 ccaccatccg cgcaggcgtt agctcttgcg cttcgccatc cagcggctgc ggctcgacat
     9181 taagcaactc ggcaattttt agcatcacag cttcgccacc tggggcgcaa cggttgattt
     9241 tttcaccgtt acagctgatg gcttccgcgt aggggcgaca gccgggataa ccgcactgag
     9301 cacactggct ctgcggtaag attttgtcaa ttttctcaac gaccggatcg tcttccaccg
     9361 caaaacggcg ggaggcataa cccagaatgg cgccaaacgc caggcccagc aggctcacgg
     9421 cggcaacggc aatccagata gcattcatta caacttcacc aaaccactaa agcccataaa
     9481 ggccagagac ataagacctg cggtaattaa cgcaatggca ttaccgcgaa aaggtgccgg
     9541 gacatcagcc acagcaaggc gttcgcggat ggcggcgaag agcaccatca ccagcgagaa
     9601 accgacagcg gcggaaaaac cgtacagcgc cgactgcaag aaattgtgcc cgagattgat
     9661 attcagcaac gccacgccga gcactgcaca gttggtggtg ataagcggca aaaaaatccc
     9721 cagcagacgg taaagcaccg ggctggtttt gcgcaccacc atctcggtga actgcacgac
     9781 cacagcaatc accagaataa atgccagggt gcgcaggtaa atcagattaa gtgggatcaa
     9841 aatccacgta tcgataagcc aggcgcaaat agacgccagc gtcatcacaa acgttgttgc
     9901 cagccccatg cccatcgcgg tttccagttt tttggaaacc cccataaacg gacagagacc
     9961 gagaaacttg accagtacaa agttattgac cagtacagtt ccgacaaaca gtaacaggta
    10021 gtcagtcatt tttcggcctg aaataaaaaa gccgcctatt atccgttaat ccagagcagg
    10081 cgacaacagg ttaactgtaa ggttattacg gattcacaaa tgtcgctttt acccgcgacg
    10141 agcgtttgaa ataggagacg atcaatgcgg ttgccaacaa agtaaacagc aactggcgaa
    10201 cggctatgcc atcttccacg ggtgaaaaag cgaatgcttt tactgccagc aatacggaaa
    10261 taagcagcca gataatatag tgtttaggaa cacaacgccg acgtttaaag aaagcgatgg
    10321 tcaaccacag tgtgtaatac cacatggcga tagcggtaat aaaagaaacg ccccataaga
    10381 tttgtgtcgt cagtgcttgt ccgccgagcg tttgaaatgt ttgcggagaa gataacgcag
    10441 cggtatacag caacaacgcc agcgtcgtac tcaacagagc gactaaaagc caggccaacg
    10501 ggccaagcaa ccagcctcca atacgttgtg gcgttgtggt ggtcataggt tctccagaat
    10561 agcgacgcaa acaggcaaat ctaattttag gggcgttatt ataaggcttt tataaccgat
    10621 cgctactttc tttattggac atagtgccag acggacttcg gtacctggcc gaggtcaaac
    10681 aaacgcccgc cagaaaccag ctctgcgcga cggtgatcgg cagcacgata catattgatc
    10741 agttcctgat cgtccgtcag ggtgtaatta agatggtcgt agagtttttc cagactttcg
    10801 agtgaactga ttttgcgaaa ttttaataag tagtcctgaa cagtcataaa aggtccataa
    10861 aataattaat accaaagggg taggtattat tagtgatgat aaaatttcac caaaagtgaa
    10921 cgcttgtgtt attacaataa taagaatgcg ctgatggcaa atattcaggg atgaaaaact
    10981 gctctgaaaa gagtaacgcg ctttactatc cctgacaatc accaacaaca tcgaacaaga
    11041 taataaattc ctggtttaat atccgacaag tgaaaacatg cacccggacg ggcagcatgg
    11101 cgctctacaa gcgcagagct tacttgtgtt gtaccgaagc actctgttca ggtggctgat
    11161 agttgtcaat gtgactcgcc acgccaagaa gaatgactga aacgacaaga acgatccaac
    11221 ctgttaattc aataagacga ttcattacag cccacatctc tcttgattga tccattaact
    11281 tcagggggta aatgttactt agcaataata gctccagcaa gatttttact gaggtttttg
    11341 cgatatttag cttttgtcgt tggaaaattc gctatttttt tgacttaagt taaacaacat
    11401 cccttattgc tggcaggtta ttaaactgtt gagcgtgggt aaaggatagt gtcaaatagc
    11461 aatcatactt caatgagagg caatgacatg agcgacaaca tccgtgttgg gttgattggg
    11521 tatggttatg cgagcaaaac cttccatgcg cccctgattg cgggcacgcc cgggctggaa
    11581 ctggcggtaa tctccagcag tgatgaaaca aaagtaaaag ccgactggcc aacggttacg
    11641 gttgtctctg agccgaagca tctgtttaac gatcccaaca tagacctgat tgtcattcct
    11701 acacccaacg atacccattt cccgttagcc aaagcggcgc ttgaggcggg taaacatgtg
    11761 gtcgttgata aaccctttac cgtgacactg tcacaagcgc gagagctgga tgcgctggca
    11821 aaaagcctgg ggcgtgtgct gtctgtattc cataaccgtc gttgggatag cgatttcttg
    11881 aagctaaaag gtttgctcgc ggaaggcgtg ctgggtgaag ttgcttactt tgagtctcat
    11941 tttgaccgct tccgtccgca ggtgcgcgat cgttggcgtg aacagggcgg cccaggcagc
    12001 ggtatctggt acgatttagc accgcatctt cttgatcagg ccattacgct atttggttta
    12061 ccggtcagca tgacggtaga tttggcacag ttacggcccg gagcgcagtc gaccgattat
    12121 ttccacgcca tcttgtccta tccacagcgg cgagtcattt tacacggtac catgctggca
    12181 gccgctgagt cagcacggta tatcgtgcat ggatcccgag gcagttatgt gaaatatggc
    12241 ctcgatccac aggaagaacg tctgaaaaat ggcgagcgtc tgccgcagga agactggggc
    12301 tacgatatgc gtgatggcgt acttacccgc gtggaaggtg aggaacgtgt cgaagaaacg
    12361 ctgttgacgg tacctgggaa ttatccggct tactatgcgg ctattcgtga tgcgttaaat
    12421 ggcgatggtg aaaatccggt tccggcaagc caggcaatcc aggtaatgga gttgattgag
    12481 ctgggcatcg aatccgccaa acatcgcgcg actttgtgcc ttgcatgaaa aatggatggt
    12541 gcaatttgca ccatccattt tgttacttcg cggcgacttt ttctcgcagt gcgcgttttt
    12601 cctcagcgct gaggaaagcc atttccagac cattaatctg tgcctggcgg atttgctcgc
    12661 gggataaccc agcagctggc gcggcaacgg tatattcgtg aatgatatcc actccctgta
    12721 cgccgggatc gtcagtgtta atgccggcac gaatgccatg ctcaaggaac gttttcagcg
    12781 gatgtgcagc cagctctgct acggtgctgg tctgaatatt ggaggtcaga caggattcaa
    12841 taccaatttg ttgctcggcg agaaaatcca tcagcgcccg atcttcaatg gcttttacgc
    12901 catgtccaat acgctccgca cccagttcac gaatcgcctg ccagatgctt tccggcccgg
    12961 cagcttcgcc tgcatggacg gtaatatgcc agcccgcatc acgcgcaagg ttgaagtgag
    13021 aaaggaacag acttcccggg aaaccaagtt catcaccggc taaatcaagt gcggtaatct
    13081 ggtcacggtg ggctaaaaag gcctccagct cttgctgaca ggcggcttcg ccgaaggttc
    13141 ggctcataat gccgataagc ttcgcctgca caccaaaagt gcggcaacct tcacgtacgc
    13201 catcgatcac cgcttcgaca acacccgcta caggcagctt atgtgccatt gccatgtagc
    13261 ctggtgaaaa acgcagctcg acatagtgca ggccgttacg ggctgcatct tcaatgtttt
    13321 caaatgccac gcggcggcag gcatcaagag aggcgagaac tttaacgccc cagtcaagtt
    13381 tggtcagaaa gctcaccaga tcgggttcgt tggcaatgac ctgaacgtgg ggaatcagtg
    13441 tttccaggga ttgtgcagga agcgagatat tatactggcg gccaagttca agaatggtct
    13501 ggggacgaat gttgccatca aggtggcgat ggatatcagt taatggcagg gtggtatcaa
    13561 tcatggtcgc actctttttc tggatataaa agtgcgcacc attataaaaa caaagcaggg
    13621 taaaaatcca cgattgcgca acgatttttt acgttgcgca attggggtta acgaacagcg
    13681 cggatggcgt taattaatcc agccacacct ttttccagtt tcgaacgtgg gcagccggca
    13741 ttgagacgga caaaaccacg accttcttca ccgtaggtat accccggcat gatcgcgact
    13801 ttttcttgtt cgataagtgc tttttgcaac gcgttgtcgt caatattcaa cggacgtaaa
    13861 tcaagccatg ccagataagt ggattgtggg atctgccagt tgagttcagg aaacgcggcg
    13921 ttcattttat ctgcgatata cgtcaggtta tctttcagat agatgcgtaa ggcatccagc
    13981 cacggcgcgc cttgctgata ggcggcgata tgggcagtta acgccagtac cgaaggggaa
    14041 gaaagcccat cacggccttt cagtgccgat aaataggcat cgcggctact gctattttct
    14101 ataatcccgt aagcaccggt cagggcggga atattgaaac ttttcgagcc cgacgttagc
    14161 aacgcccagt ctccgcgagc cacattactc cagggaatat gcggctgctc gccccaaacc
    14221 atatccatat ggatttcatc ggaaataacc cgcacaccat gacgctcgca caggtcagcc
    14281 atgatctcca gctcatcgca cgtccacact ttcccggtag gattctgtgg gctacacagg
    14341 agcataattt tacattctgg tttcgccaac acggcttcca acttgcccat atcgcaaaac
    14401 caaccatcag cctgcttctc taaagcaacg ggcattactg tgcgctggtt accttcaatg
    14461 gccttgtaaa atgcgtcata ggcgggtgtg tggatcacca cgccttcacc tgtttcagac
    14521 cactgacgaa tcagttctga aaccatatag atgacagaag ggccatacac caccgtctga
    14581 gaatcgatgg cggtgtaatg ctgggtggaa aaccagtggg caatagccgc gagaaactca
    14641 tcgtttttcc agcggctgta gccaaatacg ccgtgcatca ggcgctgatt cagcgcctct
    14701 ataatgcagg gggcagtggc aaaatccatg tctgaaatcg tgaacggtaa caggtcagca
    14761 gtgccgaaac ggtcagcgac ataatcccac tgtgtacacc atgtgccatg acgatccacg
    14821 acctttgaaa aatcgaacat atcttatcct tatgcctgga cagtatgcat cagaccggcc
    14881 atttcatctt ttactgactg aacttgtggc ccgataacaa cctgcaggtt atgttgatta
    14941 agttgtacta cgccaattgc ccgattgtcc ttcagtgcct gcacattaac aagcgacata
    15001 tctttcacag acaaacgcag acgggtaatg cagttatcga ggctgacaat attgtcggca
    15061 ccgcctaatg cttcgaggat tgcaggaacg ttgtaacctg atttacccgg cgcagcggca
    15121 acggcttttt cgattgagct ggcaacttcg ctatcgcgcc ccggggtttt gagattgaag
    15181 cgggtgatag cgaaacggaa gatggcgtag taaacgacaa accagattgc cgccaccact
    15241 ggcaccatgt accacttggt tgacagacca tgcaaaatac cgaacaccac gaagtcgatg
    15301 atattgccgt cggtattacc gatggtgacg ccgagcacag acatgacggt gaagccgagg
    15361 ccggttaaca gcgcgtggat gacatacaga actggcgcta cgaacaggaa caggaattcc
    15421 agcggttcgg tagtgccgcc aacgacgcag gcgatcaggc cagaaatcag cagaccttta
    15481 attttatggc gattttccgg gcgcgcgcag tgatacatag ctaacgctgc agctggcaga
    15541 ccgccgagaa acgcaggcat tttaccttgc gaaaggaaac gcgtggcgct ttcagaaaaa
    15601 ccgtgagtgg tcgggcaact caattgcgct tggaagatgg tcagtgcgcc gctgacggtt
    15661 tgaccgcaga cttcctgcgt gccgcctgcg tcggtaaagc gaattaatgc caccagaatg
    15721 tgatgcagac caaacggcaa cagcagacgt tcaccggtac caaacagcat cggtccgaaa
    15781 tcacccgcgc tgtttatcat atggccaagc cgctaatacc catggcgaaa atcggccaga
    15841 ctaatggaat caccaggccg acaaggccca tcaccagcga ggagataatt ggtacgaagc
    15901 gcgtaccgcc gaagaatgcc agcgcatccg gcaggcggat attatggaaa cgctcatgca
    15961 gcatccagac gataataccg gcgatcaccg caccgaggat cccggtatcg atcgactgga
    16021 tcccaagaat gctctggatg ttattggctt tcagaaccgc ggcatccgtg gttggcagaa
    16081 tgcctttatt ggtcaaccag aagtttaccg cgaggttcat taccgcataa ccgacgaagc
    16141 cagcgaatgc cgctacgcct ttattttcgc gtgccaggcc cagcgggatg gcgatacaga
    16201 acatgacagg caggaaacta aaagcaaacg agccaatctt actcatccag gtaaagatag
    16261 cctgcaacac ggggttgccc aggaccggga tcagggttat gacatcatgg ctgctaagag
    16321 aactaccaat gccgagcata atgccgcaga acgacaataa tgccacgggt aacatgaagg
    16381 ttttgcctaa ctgctggaag aactcccaca gcgtgacttt cggtgctgtt ttcgccgtca
    16441 taaaacgact cctcgtagag aacaatctgg attcagtaaa ttgcgcgaga agataaaacg
    16501 ttttatcaaa ttttagtgag gcataaatca cattacgcaa cgataatagc gggtataaga
    16561 taaataaaag gtaaaacgtt ttatctgtca cataatcagg gagtaggtca tctgcatggc
    16621 taccgccaaa aaaataacca ttcatgatgt tgcgctggct gcgggcgtgt cggtaagtac
    16681 cgtttcgctg gtgcttagtg gcaaagggcg aatctctacc gccacaggag aacgcgttaa
    16741 cgccgccatt gaagagctgg gatttgtgcg caatcgccag gcgtcggcgc tgcgcggcgg
    16801 gcaaagcggc gtcattggtt tgatcgtccg tgatttatct gcgccgtttt acgccgaatt
    16861 gacggccgga ttgacggaag ctctggaagc gcagggacgg atggtttttt tgcttcacgg
    16921 cggtaaagac ggcgagcagc tggcacagcg gttttcactg ttactgaatc agggggtcga
    16981 tggtgtggta attgccgggg ctgcaggaag cagcgatgac ctgcgacgga tggcagaaga
    17041 aaaagctatc ccggtgattt tcgcttcccg tgccagttat cttgatgatg ttgatacggt
    17101 tcgcccggac aacatgcagg ctgcacagtt gttgacggag catctcattc gcaatgggca
    17161 tcagcggatc gcctggctgg gagggcaaag ttcctcatta acccgggcag aacgggtggg
    17221 aggctattgt gcaactctac taaaatttgg cctgccgttt cacagcgatt gggtgctgga
    17281 gtgcacatcc agccagaagc aagctgcgga agctatcacg gcgcttttac gtcataaccc
    17341 gaccatcagt gctgtggttt gctataacga aactattgcg atgggggcat ggtttggttt
    17401 gctgaaagca gggcggcaaa gcggggaaag cggagtcgat cgttactttg agcaacaagt
    17461 ttcgctggcg gcatttaccg atgcgacacc aaccacactt gatgatatac ccgttacctg
    17521 ggccagcacg cctgcgcggg aacttggtac cacacttgcg gatcgcatga tgcaaaaaat
    17581 cacccatgaa gagacgcatt cacgcaatct tattattccc gcccggctca ttgcagcgaa
    17641 ataatcctct ctttatctgc tatacctggt agtgtccttt cctcaaggtt aatgataaaa
    17701 aatgtggcac acagg
//
LOCUS       DADMHC010000068        17583 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.068, whole genome shotgun sequence.
ACCESSION   DADMHC010000068 DADMHC010000000
VERSION     DADMHC010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17583
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.068"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(482..1615)
                     /gene="thiH"
                     /locus_tag="JNZ57_001957"
     CDS             complement(482..1615)
                     /gene="thiH"
                     /locus_tag="JNZ57_001957"
                     /EC_number="4.1.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminoacetate synthase ThiH"
                     /protein_id="HAY8828186.1"
                     /translation="MKTFSDRWRQLDWDDIRLRINGKTAVDVERALNASQFTRDDMMA
                     LLSPAASGYLEQLAQRAQRLTRQRFGNAVSFYVPLYLSNLCANDCTYCGFSMSNRIKR
                     KTLDEADIARESAAIREMGFEHLLLVTGEHQAKVGMDYFRRHLPALREQFSSLQMEVQ
                     PLAKTEYAELKQLGLDGVMVYQETYHEATYARHHLKGKKQDFFWRLETPDRLGRAGID
                     KIGLGALIGLSDNWRVDCYMVAEHLLWLQQHYWQSRYSVSFPRLRPCTGGIEPASIMD
                     ERQLVQTICAFRLLAPEIELSLSTRESPWFRDRVIPLAINNVSAFSKTQPGGYADNHP
                     ELEQFSPHDDRRPEAVAAALTAQGLQPVWKDWDSYLGRASQRL"
     gene            complement(1612..2457)
                     /gene="thiG"
                     /locus_tag="JNZ57_001958"
     CDS             complement(1612..2457)
                     /gene="thiG"
                     /locus_tag="JNZ57_001958"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HAY8828187.1"
                     /translation="MSSGRNISCRMATRSCFFRLLQGVEMLRIADKTFDSHLFTGTGK
                     FASSQLMVEAIRASGSQLVTLAMKRVDLRQHNDAILEPLIAAGVTLLPNTSGAKTAEE
                     AIFAAHLAREALGTNWLKLEIHPDARWLLPDPIETLKAAEMLVQQGFVVLPYCGADPV
                     LCKRLEEVGCAAVMPLGAPIGSNQGLETRAMLEIIIQQATVPVVVDAGIGVPSHAAQA
                     LEMGADAVLVNTAIAVADDPVNMAKAFRLAVEAGLLARQSGPGSRSHFAHATSPLTGF
                     LEASA"
     gene            complement(2384..2584)
                     /gene="thiS"
                     /locus_tag="JNZ57_001959"
     CDS             complement(2384..2584)
                     /gene="thiS"
                     /locus_tag="JNZ57_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HAY8828188.1"
                     /translation="MQILFNDQPMQCAAGQTVHELLEQLDQRQAGAALAINQQIVPRE
                     QWTQHIVQDGDQILLFQVIAGG"
     gene            complement(2568..3323)
                     /gene="thiF"
                     /locus_tag="JNZ57_001960"
                     /pseudo
     CDS             complement(2568..3323)
                     /gene="thiF"
                     /locus_tag="JNZ57_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709786.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole biosynthesis adenylyltransferase ThiF"
     gene            complement(3316..3951)
                     /gene="thiE"
                     /locus_tag="JNZ57_001961"
     CDS             complement(3316..3951)
                     /gene="thiE"
                     /locus_tag="JNZ57_001961"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709787.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HAY8828189.1"
                     /translation="MYQPDFPPVPFRLGLYPVVDSVQWIERLLDAGVRTLQLRIKDRR
                     DEEVEADVVAAIALGRRYNARLFINDYWRLAIKHQAYGVHLGQEDLQATDLNAIRAAG
                     LRLGVSTHDDMEIDVALAARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLADYP
                     TVAIGGISLARAPAVIATGVGSIAVVSAITQAADWRLATAQLLEIAGVGDE"
     gene            complement(3951..5846)
                     /gene="thiC"
                     /locus_tag="JNZ57_001962"
     CDS             complement(3951..5846)
                     /gene="thiC"
                     /locus_tag="JNZ57_001962"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HAY8828190.1"
                     /translation="MSATKLTRREQRARAQHFIDTLEGTAFPNSKRIYLTGTHSGVRV
                     PMREIQLSPTLIGGSKEQPQFEENEAIPVYDTSGPYGDPQIAINVQQGLAKLRQPWID
                     ARGDTEELTVRSSDYTKARLADDGLDELRFSGVLTPKRAKAGRRVTQLHYARQGIITP
                     EMEFIAIRENMGRERIRSEVLRHQHPGMSFGARLPENITAEFVRDEVAAGRAIIPANI
                     NHPESEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSMRWGADTVMDLSTGRYI
                     HETREWILRNSPVPIGTVPIYQALEKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHA
                     GVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICEICAAYDVSLSL
                     GDGLRPGSIQDANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEE
                     LEHCHEAPFYTLGPLTTDIAPGYDHFTSGIGASMIGWFGCAMLCYVTPKEHLGLPNKE
                     DVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPFTARAYH
                     DETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAATQTIEMGMADMSENFRARGGEI
                     YLRKEEA"
     regulatory      complement(5927..6027)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(6080..6556)
                     /gene="rsd"
                     /locus_tag="JNZ57_001963"
     CDS             complement(6080..6556)
                     /gene="rsd"
                     /locus_tag="JNZ57_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma D regulator"
                     /protein_id="HAY8828191.1"
                     /translation="MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKE
                     SYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQ
                     IMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA"
     gene            6651..7424
                     /gene="nudC"
                     /locus_tag="JNZ57_001964"
     CDS             6651..7424
                     /gene="nudC"
                     /locus_tag="JNZ57_001964"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HAY8828192.1"
                     /translation="MDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRAL
                     QIGEWQGEPVWLVQQQRRHDMGSVRQVIDLDVVLFQLAGRGVQLAEFYRSHKYCGYCG
                     HEMYPSKTEWAMLCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGF
                     VEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPK
                     ELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAEYE"
     gene            7464..8528
                     /gene="hemE"
                     /locus_tag="JNZ57_001965"
     CDS             7464..8528
                     /gene="hemE"
                     /locus_tag="JNZ57_001965"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HAY8828193.1"
                     /translation="MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAG
                     DFMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSP
                     VTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGS
                     SKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRD
                     YQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIA
                     DARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVP
                     PEHAGVFVEAVHRLSEQYHR"
     gene            8538..9209
                     /gene="nfi"
                     /locus_tag="JNZ57_001966"
     CDS             8538..9209
                     /gene="nfi"
                     /locus_tag="JNZ57_001966"
                     /EC_number="3.1.21.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease V"
                     /protein_id="HAY8828194.1"
                     /translation="MDLASLRAQQIELASSVIREDRLDKDPPDLIAGADVGFEQGGEV
                     TRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEMLSQKPDLVFV
                     DGHGISHPRRLGVASHFGLMVDVPTIGVAKKRLCGKFEPLSSEPGALAPLMDKGEQLA
                     WVWRSKARCNPLFIATGHRVSVDSALAWVQRCMKGYRLPEPTRWADAVASERPAFVRY
                     TANQP"
     gene            9252..9842
                     /locus_tag="JNZ57_001967"
     CDS             9252..9842
                     /locus_tag="JNZ57_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjaG family protein"
                     /protein_id="HAY8828195.1"
                     /translation="MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGD
                     GQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIPSADDFDLYGVYPAIDACVALSE
                     LVHSRLSGETLEHAVKVSKTSITTVAMLEMTQVGREMSDEELKENPAVEQEWDIQWEI
                     FRLLAECEERDIELIKGLRADLREAGESNIGIIFQQ"
     gene            10029..10301
                     /gene="hupA"
                     /locus_tag="JNZ57_001968"
     CDS             10029..10301
                     /gene="hupA"
                     /locus_tag="JNZ57_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein HU-alpha"
                     /protein_id="HAY8828196.1"
                     /translation="MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQL
                     VGFGTFKVNHRAERTGRNPQTGKEIKIAAANVPAFVSGKALKDAVK"
     gene            10314..11009
                     /locus_tag="JNZ57_001969"
     CDS             10314..11009
                     /locus_tag="JNZ57_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1481 domain-containing protein"
                     /protein_id="HAY8828197.1"
                     /translation="MNSFNEGVVSPLLSFWRRSLMLAGALLLTACSHNSSLPPFTASG
                     FAEDQGAVRIWRKDSGDNVHLLAVFSPWRSGDTTTREYRWQGDNLTLININVYSKPPV
                     NIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRADQIRQISDALRQGRVVLRQG
                     RWHAMEQTVTTCEGQTIKPDLDSQAIAHIERRQSRSSVDVSVAWLEAPEGSQLLLVAN
                     SDFCRWQPNEKTF"
     gene            complement(11011..11436)
                     /gene="zraP"
                     /locus_tag="JNZ57_001970"
     CDS             complement(11011..11436)
                     /gene="zraP"
                     /locus_tag="JNZ57_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc resistance sensor/chaperone ZraP"
                     /protein_id="HAY8828198.1"
                     /translation="MKRNTKIALVMMALSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQ
                     QTAWQKIHNDFYAQSSALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLD
                     ELRVKRDIAMAEAGIPRGAGMGMGYGGCGGGGHMGMGHW"
     gene            11674..13050
                     /gene="zraS"
                     /locus_tag="JNZ57_001971"
     CDS             11674..13050
                     /gene="zraS"
                     /locus_tag="JNZ57_001971"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     ZraS"
                     /protein_id="HAY8828199.1"
                     /translation="MRFMQRSKDSLAKWLSAILPVVIVGLVGLFAVTVIRDYGRETAA
                     ARQTLLEKGSVLIRALESGSRVGMGMRMHHAQQQALLEEMAGQPGVRWFAVTDEQGTI
                     VMHSNSGMVGKQIYSPQEMQQLHPGDEEAWRRIDSADGEPVLEIYRQFQPMFGAGMHR
                     MRHMQQYAATPQAIFIAFDASNIVSAEDREQRNTLIILFALATVLLASVLSFFWYRRY
                     LRSRQLLQDEMKRKEKLVALGHLAAGVAHEIRNPLSSIKGLAKYFAERAPAGGEAHQL
                     AQVMAKEADRLNRVVSELLELVKPTHLALQAVDLNTLINHSLQLVSQDANSREIQLRF
                     TANDTLPEIQADPDRLTQVLLNLYLNAIQAIVQHGVISVTVSESGAGVKISVTDSGKG
                     IAADQLEAIFTPYFTTKAEGTGLGLAVVHNIVEQHGGTIQVASQEGKGSTFTLWLPVN
                     ITRKDPQG"
     gene            13047..14372
                     /gene="zraR"
                     /locus_tag="JNZ57_001972"
     CDS             13047..14372
                     /gene="zraR"
                     /locus_tag="JNZ57_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent response regulator
                     transcription factor ZraR"
                     /protein_id="HAY8828200.1"
                     /translation="MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQ
                     VREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALD
                     YLIKPLDFDNLQATLEKALAHTHSIDAETPAVTASQFGMVGKSPAMQHLLSEIALVAP
                     SEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAALNESLLESELFGHEKGAF
                     TGADKRREGRFVEADGGTLFLDEIGDISPMMQVRLLRAIQEREVQRVGSNQTISVDVR
                     LIAATHRDLAAEVNAGRFRQDLYYRLNVVAIEVPSLRQRREDIPLLAGHFLQRFAERN
                     RKAVKGFTPQAMDLLIHYDWPGNIRELENAVERAVVLLTGEYISERELPLAIASTPIP
                     LGQSQDIQPLVEVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR"
     gene            complement(14369..15658)
                     /gene="purD"
                     /locus_tag="JNZ57_001973"
     CDS             complement(14369..15658)
                     /gene="purD"
                     /locus_tag="JNZ57_001973"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HAY8828201.1"
                     /translation="MKVLVIGNGGREHALAWKAAQSPLVETVFVAPGNAGTALEPALQ
                     NVAIGVTDIPALLDFAQNEKIDLTIVGPEAPLVKGVVDTFRAAGLKIFGPTAGAAQLE
                     GSKAFTKDFLARHKIPTAEYQNFTEVEPALAYLREKGAPIVIKADGLAAGKGVIVAMT
                     LEEAEAAVHDMLAGNAFGDAGHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQDHKRV
                     GDKDTGPNTGGMGAYSPAPVVTDDVHQRTMERIIWPTVKGMAAEGNTYTGFLYAGLMI
                     DKQGNPKVIEFNCRFGDPETQPIMLRMKSDLVELCLAACESKLDEKTSEWDERASLGV
                     VMAAGGYPGDYRTGDVIHGLPLEEVAGGKVFHAGTKLADDEQVVTNGGRVLCVTALGH
                     TVAEAQKRAYALMTDIHWDDCFCRKDIGWRAIEREQN"
     gene            complement(15670..17259)
                     /gene="purH"
                     /locus_tag="JNZ57_001974"
     CDS             complement(15670..17259)
                     /gene="purH"
                     /locus_tag="JNZ57_001974"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HAY8828202.1"
                     /translation="MQQRRPVRRALLSVSDKAGIVEFAQALSARGVELLSTGGTARLL
                     AEKGLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGQDDAIMEEHQIQPIDMVV
                     VNLYPFAQTVAREGCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYDAIIKEM
                     DDNEGSLTLATRFDLAIKAFEHTAAYDSMIANYFGSMVPAYHGESKEAAGRFPRTLNL
                     NFIKKQDMRYGENSHQQAAFYIEENVKEASVATATQVQGKALSYNNIADTDAALECVK
                     EFAEPACVIVKHANPCGVAIGNSILDAYDRAYKTDPTSAFGGIIAFNRELDAETAQAI
                     ISRQFVEVIIAPSASEEALKITAAKQNVRVLTCGQWGERVPGLDFKRVNGGLLVQDRD
                     LGMVGAEELRVVTQRQPTEQELRDALFCWKVAKFVKSNAIVYAKNNMTIGIGAGQMSR
                     VYSAKIAGIKAADEGLEVKGSSMASDAFFPFRDGIDAAAAAGVTCVIQPGGSIRDDEV
                     IAAADEHGIAMLFTDMRHFRH"
BASE COUNT         3963 a         4714 c         4832 g         4074 t
ORIGIN      
        1 aaatcagtga aatttttcac cattgcctac aacttattga gaaataagca gcttcctcag
       61 ccctcaaaat aacaaaaccc accttaaggt gggtttcgcc agagaattat ctctggtatt
      121 cagaacgcca ttaccggact ttgccttgac cttgcgataa tcgcaggttg cgggatgtct
      181 gaatttcttc agtctgctgc atcctggaag atgagaacat gtgttcttat tttcgtctct
      241 atcatagttg agtatttact ctcttacaat cagatctctt tcattgctca acaggcgatg
      301 gcttcagact ttgcattacg gaatttttaa gaaaggcagg gcgaaacgag gaagaagctt
      361 ttcgccctgg acaacattcc tgctgacggc actaccataa aaaaacacaa cgctttcaac
      421 aaccttgcgt ttttcatctt ccgtagcggc tcggaataaa tttacgttct tacattccgt
      481 ctcatagtct ttgcgaggcc cgtcccagat agctgtccca gtctttccat accggctgca
      541 aaccctgagc ggttaacgcg gcagcaaccg cttccggtct gcgatcgtcg tgcggtgaga
      601 actgttccaa ctcggggtga ttatcggcat agccacctgg ctgcgttttc gagaaggcgc
      661 tgacgttatt gatcgccagc ggaataacgc gatcgcgaaa ccacggtgat tcccgcgtgg
      721 agagtgacag ttcaatctcc ggtgcaagca gtcggaaggc gcagatggtt tgcactaact
      781 ggcgttcatc cataatcgac gcaggctcaa tgccgccagt acacgggcgc aggcgcggaa
      841 aagagacaga gtaacggctt tgccagtaat gctgttgcag ccatagcaaa tgttcggcaa
      901 ccatatagca gtcaacgcgc cagttgtcgg aaaggccaat tagcgcgccg aggcctatct
      961 tatcaatccc cgcacgcccc agccgatccg gcgtttccag ccgccagaag aagtcctgtt
     1021 ttttgccttt cagatgatgg cgggcataag tcgcctcgtg atatgtctcc tgataaacca
     1081 tcacgccatc cagaccaagc tgctttaact cggcgtattc cgtcttcgcc agcggttgca
     1141 cttccatttg tagtgaagag aactgttcac gcagggcggg gagatgacga cgaaagtaat
     1201 ccatccccac tttcgcctga tgttcaccag tgactaatag cagatgttca aagcccatct
     1261 cccgtatagc ggcgctttcc ctggcaatat ccgcttcatc cagcgttttg cgcttgatgc
     1321 gattactcat ggaaaatccg cagtacgtgc agtcgttagc gcaaagattg gaaagataaa
     1381 gcgggacgta gaaactaact gcgttgccaa atcgctgacg ggtcagacgc tgcgcccgtt
     1441 gggccagttg ttccagatag ccactggcgg ctggcgataa cagcgccatc atatcgtcgc
     1501 gggtgaattg cgaggcattt agcgcccgct ctacgtcaac agccgttttg ccgttgatac
     1561 gcaggcggat gtcatcccag tccagttgtc gccagcgatc gctgaaggtt ttcatgccga
     1621 tgcctccaga aatccagtca gcgggctggt ggcatgagca aaatgactgc ggctgcccgg
     1681 tccggactga cgtgccagca ggcctgcttc taccgccaga cgaaatgcct tcgccatgtt
     1741 gacgggatcg tccgctacgg caatcgccgt attcactaac accgcgtcgg cccccatttc
     1801 cagggcctgc gcggcatggc tgggaacgcc gatgccagca tcgacaacca ccggaactgt
     1861 ggcctgctgg ataataatct ccagcatggc acgggtttcc agtccctgat tcgagccaat
     1921 cggcgcgccg agcggcatca ccgctgcaca gccgacttct tccagacgtt tacacaatac
     1981 cggatcggcc ccgcagtaag gcagcacgac aaatccctgt tgtaccagca tttcggcggc
     2041 tttcagagtt tcgatgggat cgggcaacag ccagcgggcg tcagggtgaa tctctaattt
     2101 taaccagttt gtgcctaacg cttcacgtgc cagatgggcg gcgaaaatgg cttcttccgc
     2161 tgttttcgcc ccggaagtat ttggcagcag ggtcacaccc gccgcgataa gcggttcgag
     2221 gatagcgtcg ttgtgctggc gcaagtcgac acgtttcatc gccagtgtca ccagctggct
     2281 gccggaagcg cggatcgcct ccaccatcag ttgtgaagaa gcgaatttcc ctgtgccggt
     2341 aaacagatgt gaatcaaacg ttttgtccgc aatacgtaac atctcaaccc cctgcaataa
     2401 cctgaaaaag caggatctgg tcgccatcct gcacgatatg ttgcgtccac tgctcacgcg
     2461 ggacgatttg ctgattaatc gccagagccg cgcccgcttg tcgttggtcg agttgctcca
     2521 gtagttcgtg aacagtttgc ccggcggcgc actgcatcgg ttgatcgtta aacaggatct
     2581 gcattgcttc ctccgcatac cgggcaacca ctggcgcggc gcaacgccag gctgcgccac
     2641 tggctcgatt taccgtcgaa cagtcggagt tctcccgcag gtgtctctat accgcttaat
     2701 aacttaatgg cttccagtgc ctgcaaagtg cccataaccc cgaccaccgg gccaaccacg
     2761 cccgccgtgc ggcagttgcg ttctggctcc tggttatctg gccacaggca gcggtaacac
     2821 ccctgctccc agggcggcgt cagtaccatc aactgaccgc caaatccgac cgcgctggcg
     2881 gtgataagcg gcgtgttgag taccacgcag gcggcattaa tctcctggcg agtcgccata
     2941 ttgtcggtac agtcgagcac cacatcggcc cgtgcaaccg catcttttaa cgcctcaccc
     3001 gttaaccgtt gttgtaatgc tgtcagttga atgtcgggat tcaactgtgt cagtcgctgt
     3061 tggctgacct gcgatttcgg gctgttgata tcttcagtgg taaagagaat ttgtcgttac
     3121 agattgctta aatgcacatc gtcgtcatct gccagtacca gcgtcccgac gccagcgccc
     3181 gccaggtata gcgcagcagg tgtacccagc ccgccaagac cgataatcag cacctggctg
     3241 tcgagcagtt tttgctgccc gtcaagagcg atatcgtcga gcaggatttg gcggctataa
     3301 cgcataaaat cacggtcatt catcgccaac tcctgcaatt tccagcaact gtgccgttgc
     3361 caaacgccag tctgcggctt gagtaatggc gctgacgacg gcgatactgc cgacacccgt
     3421 tgctatcacc gcaggcgcgc gtgccagact gataccgcca atcgccacgg tgggataatc
     3481 cgccagtcgc tcaacatgcc gtgccagctg ttccagcccc tgcggtgcag aaggcatctg
     3541 tttggtttgc gtcgggaaca catgtcccag cgcgatataa gaggggcgtg ctgccagcgc
     3601 gacgtcgatt tccatatcgt catgtgtcga aacacccagc cgcaggcctg ccgcgcggat
     3661 ggcattgaga tcggtggctt gcaaatcttc ctgccccaaa tggacgccat acgcctgatg
     3721 cttgatcgcg agccgccagt aatcgttgat aaacaatcgc gcgttatagc ggcggcccag
     3781 cgcaattgcc gccacgacat cggcttccac ctcttcatcg cgccgatctt tgatgcgtag
     3841 ctggagagta cgtacgcctg catccaacag acgttcgatc cactgtacgc tgtccaccac
     3901 tgggtacagt cctaaacgaa aaggtacagg aggaaaatca ggctgataca tcacgcttcc
     3961 tccttacgca ggtagatttc tccgcctctg gcacggaagt tctccgacat atccgccatt
     4021 cccatttcaa tagtttgcgt ggcggcgtaa tcacgcactt cctggctgat tttcatcgag
     4081 cagaatttcg gcccacacat ggagcaaaaa tgggcgactt tacctgactc ttgcggcagg
     4141 gtttcatcgt gataagcgcg ggcggtaaac gggtcgaggg ccagattaaa ctggtcttcc
     4201 cagcgaaatt cgaagcgggc tttcgacatg gcgttatcgc gaatttgcgc gcccggatgc
     4261 cctttcgcca ggtcagcggc gtgggcggca atcttatagg tgataagccc ctgcttaaca
     4321 tcttctttat taggcagacc cagatgctct tttggcgtta cgtaacagag catcgcgcag
     4381 ccaaaccagc caatcatcga cgcaccaatc cccgacgtga agtggtcata gcccggcgca
     4441 atatcggtag ttagcggccc cagagtgtaa aacggcgctt cgtggcagtg ctctaactcc
     4501 tcggtcatat tgcggcggat catctgcatc ggcacgtggc ctgggccttc aatcatcacc
     4561 tgcacgtcat attcccaggc aattttggtc agttcgccca gcgtatgcag ctcggcaaac
     4621 tgcgcttcat cgttggcgtc ctgaatagaa ccggggcgca gaccgtcgcc cagcgacagc
     4681 gaaacgtcat aagcggcaca gatttcacaa atttcgcgga agtgttgata gaggaaattt
     4741 tcctgatgat gggagaggca ccatttcgcc ataatcgaac cgccgcgaga gacgataccg
     4801 gtcaggcgtt tcgcggtcat cggcacatag cgcaacagta cgcccgcatg gatagtgaag
     4861 taatccacac cttgctcggc ctgttccagc agcgtgtcgc ggaacgcttc ccaggtaaga
     4921 tcttcggcga tcccgttaac cttctccagc gcctggtaga tcggcactgt accgatcggc
     4981 accggactgt tacgcaaaat ccactcgcgg gtttcgtgaa tatagcgacc ggtggagaga
     5041 tccatcaccg tatccgctcc ccagcgcatg gaccatacca gcttttccac ttcttcttcg
     5101 atggaagagg tgaccgccga gttgccgata ttggcgttaa cttttaccag gaagttacgg
     5161 ccaataatca tcggctccga ttccggatga ttaatgttgg ccgggataat cgcacgtccg
     5221 gcagcaactt catcacggac aaattccgca gtgatatttt ccggcagacg tgcgccaaag
     5281 ctcattcccg gatgctggtg gcgtaaaact tcgctacgta tgcgctcgcg gcccatattc
     5341 tcgcggatgg cgatgaattc catttccggt gtgatgatgc cctggcgggc gtagtgcagt
     5401 tgggtgacac ggcgtcctgc tttggcgcgt tttggtgtta gtacgccgct aaaacgcagt
     5461 tcgtcgaggc catcatctgc cagccgcgct ttagtgtaat cggaactgcg cacggtaagt
     5521 tcttcggtat cgccgcgcgc atcgatccac ggctggcgta gttttgccag cccttgctgc
     5581 acgttaatgg cgatctgcgg atcgccatat gggccggagg tgtcgtagac cggaatcgct
     5641 tcgttttctt caaactgcgg ctgttctttg ctgccgccga ttagcgtcgg gctaagctgg
     5701 atctcacgca tcggcacgcg aacgccagag tgtgtgccag tgaggtaaat gcgttttgag
     5761 ttgggaaagg cggtgccttc cagggtgtcg ataaaatgtt gggcccgggc gcgttgttcg
     5821 cggcgggtca gttttgttgc agacatagct cattccaaaa agttaaggac gtggcttgtc
     5881 agacgacgga tgaagcaaga gacgatcgcc gcaaaggcga tgcgatagca gattaactct
     5941 tgttcccttc gcaggtatta gcctgatcag gttccgcgga tcccgaataa acggtctcag
     6001 ccagttaagg cactccgaca agaaattagc ccccacaaac ggggcgttga atgtaaatta
     6061 cgcgttaaca gcgcagaact caagcaggat gtttgacgcg ggcggcgtca agcaccagca
     6121 gaatcagctt atcttccagc acaaagcgcg cttccagcgc ctcgccgatg tcagataaaa
     6181 cctgttgaaa ctcaaggtaa ttatcatgat cgatggcggt ttccaggctg gaatcgtagt
     6241 aatccataat ctgttgggta ttggcttcga gttgcggcca aatcttcgcg gcgcgcgcga
     6301 gttgcccgtt gccttccagc ttatgaagaa tgcgctcata aatactgaaa tgtccggcag
     6361 acaagtaatc gaccaggctc tgacaaaaat catcaagggc tttttcgttt agcctcatgt
     6421 acgattcttt gccaggctta atgccaacca gattgtagta agccacgagc agatgcttac
     6481 gtacatgtag ccagcgatca accagtttgt tacttcctct gacgcgctcc gtcaggttat
     6541 cgagctggtt aagcatgatt gactccgcaa gtttgtattc aaaaactgct cagtgagaaa
     6601 tgtaaaaacc atgttaaaca tgccagtgat gcaaaggtag tgcaagagct atggatcgta
     6661 taattgaaaa attagatcac ggctggtggg tcgtcagcca tgaacaaaaa ttatggttgc
     6721 cgaagggaga attgccatat ggcgaagcgg caaatttcga tcttgtgggt cagcgcgcac
     6781 tacaaatcgg cgaatggcag ggggaacctg tttggttagt acaacagcag cggcgtcacg
     6841 atatggggtc ggtacgtcag gtcattgatc tcgatgttgt gctgtttcaa ctggccggac
     6901 gaggcgtaca actggcggag ttttaccgat cgcataaata ctgtggttac tgcgggcatg
     6961 aaatgtatcc gagcaaaacc gaatgggcga tgctgtgcag ccattgccgt gagcgttact
     7021 acccgcaaat cgccccctgc attattgttg ccatccgtcg cgatgattcg atcctcctcg
     7081 cccagcatac ccgccatcgt aacggtgtcc atacagtact tgccggattc gtcgaagtgg
     7141 gcgaaaccct cgagcaggca gtcgcgcggg aagtgatgga agagagcgga attaaagtta
     7201 aaaacttgcg ttacgtgact tctcagccgt ggccgtttcc tcagtcttta atgaccgcgt
     7261 ttatggcgga atatgacagc ggcgacatcg tgatcgaccc gaaagaattg ctcgaggcga
     7321 actggtatcg ctatgacgat ttgccgttac tcccgccgcc cggcaccgta gcgcgccgtc
     7381 tgatagaaga tactgtggcg atgtgtcggg cagagtatga gtgatgatac actgaccgcc
     7441 tgacgcacta aggaacagcc aaaatgaccg aacttaaaaa cgatcgttat ctgcgggcgc
     7501 tgctgcgcca gcccgttgat gtcactccag tatggatgat gcgccaggcg ggtcgctatc
     7561 taccggaata taaagccacg cgcgcccagg cgggcgattt tatgtcgctg tgcaaaaacg
     7621 ccgagctggc gtgcgaagtg actttgcaac cgctgcgtcg ctacccgctg gatgcggcga
     7681 tcctcttttc cgatatcctc accgtgccgg acgcgatggg gttagggctc tattttgaag
     7741 ccggagaagg tccgcgtttt acctcgccag tcacctgcaa agccgacgtc gataagctgc
     7801 caattccgga cccggaagat gagctgggtt acgtgatgaa cgcggtgcgt accattcgtc
     7861 gcgaactgaa aggcgaagtg ccgctgattg gtttttccgg cagcccgtgg acgctggcaa
     7921 cctacatggt ggaaggcggc agcagcaaag ccttcaccgt gatcaaaaaa atgatgtatg
     7981 ccgatccgca ggcgctgcac gctctactcg ataaactggc gaaaagcgtc actttgtatc
     8041 tgaatgcgca gattaaagcc ggtgctcagg cagtgatgat tttcgacacc tggggcggtg
     8101 tgcttaccgg gcgcgattat caacagttct cgctctatta catgcataaa attgttgatg
     8161 gtttactgcg tgaaaacgac ggtcgccgcg taccggtcac gctgtttacc aaaggcggcg
     8221 gacagtggct ggaagcgatg gcagaaaccg gttgcgatgc gttgggcctc gactggacaa
     8281 cggatatcgc cgatgcgcgc cgccgtgtgg gcaataaagt cgcgttgcag ggtaatatgg
     8341 atccgtcgat gctgtacgcg ccgcctgccc gcattgaaga agaagtagcg actatacttg
     8401 caggtttcgg tcacggcgaa ggtcatgtct ttaaccttgg tcacggcatt catcaggatg
     8461 tgccgccaga acatgctggc gtgttcgtgg aggcagtgca tcgactgtct gaacaatatc
     8521 accgctaagg agtgattatg gatctcgcgt cattacgcgc tcaacaaatc gaactggctt
     8581 cttctgtgat ccgcgaggat cgactcgata aagatccacc ggatctgatc gccggagccg
     8641 atgtcgggtt tgagcagggc ggagaagtga cgcgagcggc gatggtgctg ctgaaatatc
     8701 cctcgcttga gctggtggag tataaagttg cccgcatcgc caccaccatg ccttacattc
     8761 caggttttct ttccttccgc gaatatcctg cgctgctggc agcgtgggag atgctgtcgc
     8821 aaaagccgga tttagtgttt gtcgatggtc atgggatctc gcatcctcgc cgtcttggcg
     8881 tcgccagcca ttttggtttg atggtggatg tgccaacgat cggcgtggcg aaaaaacggc
     8941 tctgcggtaa attcgaaccg ctctccagcg aaccgggcgc gctggcccca ctgatggata
     9001 aaggcgagca gctggcctgg gtctggcgca gcaaagcgcg ctgtaacccg ttgtttatcg
     9061 ctaccggcca tcgggtcagc gtggacagcg cgctggcgtg ggtacaacgc tgcatgaaag
     9121 gctatcgtct gccggagcca acgcgctggg cggacgcggt ggcctcggaa cgtccggcgt
     9181 tcgtgcgcta tacagcaaat cagccctaat tcaggtaaac tgcggataat ttccgtattt
     9241 gagaacttaa catgttacaa aacccaattc atctgcgtct ggagcgcctg gaaagctggc
     9301 agcatgtcac tttcatggct tgcttatgcg aacgcatgta ccccaattac gccatgttct
     9361 gccagcaaac cggttttggt gatgggcaaa tttaccgtcg tattctcgat ctcatctggg
     9421 aaacgctgac cgttaaagac gcaaaagtaa atttcgacag ccaactggag aaatttgaag
     9481 aagcgattcc ttcagccgac gatttcgatc tgtacggcgt ttatccggca atcgatgcct
     9541 gcgtggcgtt aagtgaactg gtccattcgc gtttgagtgg tgaaacgctc gaacacgcgg
     9601 tgaaagtgag taagacctcc atcacgaccg ttgcgatgct ggaaatgact caggttggtc
     9661 gcgaaatgag cgatgaagag cttaaagaaa acccagctgt agagcaagaa tgggacattc
     9721 agtgggaaat attccgactt ttagctgagt gcgaagaacg cgatatcgag ctgataaaag
     9781 gccttagggc agacctgcgt gaggcgggtg agagcaatat tggtataatt tttcagcaat
     9841 aagaccagaa aacgtgattt aacgcctgat ttgtcgtacc tggagtcttc cctttcgccc
     9901 cccgtctggt ctacatttgg ggggcgaaaa aaagtggcta tcggtgcgtg tatgcaggag
     9961 agtgctattc tggcatttcc gtcgcactcg atgcttagca agcgataaac acattgtaag
    10021 gataacttat gaacaagact caactgattg atgtaattgc agagaaagca gaactgtcca
    10081 aaacccaggc taaagctgct ctggagtcca ctctggctgc aattactgag tctctgaaag
    10141 aaggcgatgc tgtacaactg gttggtttcg gtaccttcaa agtgaaccac cgcgctgagc
    10201 gtactggccg caacccgcag accggtaaag aaatcaaaat tgccgcagct aacgtaccgg
    10261 catttgtttc tggcaaggca ctgaaagacg cagttaagta agattgcgtg gcagtgaaca
    10321 gttttaacga aggggtggtt tcaccccttt tgtctttctg gcgtcgatca ttgatgctgg
    10381 ctggcgctct gcttctcact gcctgtagtc ataactcttc acttcctccc tttaccgcca
    10441 gtggatttgc tgaagaccag ggcgcggtac gcatctggcg aaaagacagc ggcgataatg
    10501 tgcatctgct tgccgtgttt agcccgtggc gcagtggcga taccacgacg cgagagtatc
    10561 gctggcaggg cgataacctc acgctcatca atatcaatgt ttacagcaaa ccgccggtga
    10621 atattcgcgc gcgttttgac gatcgcggtg atctgagctt tatgcaacgt gaatccgatg
    10681 gggaaaagca gcagctttct aacgaccaaa tcgatttata ccgttatcgt gctgatcaga
    10741 tccgccagat tagcgatgcc ttacgtcagg ggagagtcgt gctgcgccag gggcgctggc
    10801 atgcgatgga acagaccgtg accacctgcg aagggcaaac cattaaacct gatttagatt
    10861 cgcaggcgat agcgcatatc gagcgccgcc agagccgctc ttctgttgat gtcagcgtgg
    10921 catggctgga agcgcccgaa ggttcgcaat tactgttagt ggcaaactct gatttctgtc
    10981 gctggcaacc caacgagaaa acgttctgat ttaccagtgg cccataccca tatgaccgcc
    11041 accaccgcag ccgccgtagc ccatgcccat tccggctccg cgcggaatac ccgcttcagc
    11101 catcgcgata tctcgtttca cccgtaactc atctaacgac tgacgcaaat tctccatctc
    11161 tttggcgacc gcgttaattt tgctgctatc cggtgggttc gcggctaaca gggcattgta
    11221 ttcataacgc ttcgtcacca gttgctgttg cagtgcgctg ctttgagcgt aaaagtcatt
    11281 atggattttc tgccacgctg tctgttgttc gctggtcaaa ggcgcggcat tttgctgcca
    11341 cataccgtgt ccgccgtgag caaatgcaga tgtcgatccc atcgccattg ctgaaagcgc
    11401 catcattacc agggcaattt tcgtgttccg tttcatggtt aatcctccag tggttgtctt
    11461 acttcgggta ttgcatcttc cgtgccaacg atgaaacgct gatatgacgg gtaatctggc
    11521 atgataaacg agtaaaaatg actcgcctgc tgcgggtagc gagtcatttt tactcattga
    11581 aacttaagcc tttgtgttac agcgcagggt aagcgctgat aaaagatggc atgatttctg
    11641 ctgtcagaaa gggatgagca ggcaaagaag aagatgcgtt ttatgcaacg ttctaaagac
    11701 tccttagcta aatggttaag cgcgatcctc cccgtggtca ttgttgggct ggtagggttg
    11761 tttgcggtga cggtgattcg cgattatggg cgcgagactg ccgccgccag acaaacgctg
    11821 ctggaaaaag gcagtgtact tattcgcgct cttgaatccg gctcgcgcgt cggcatgggg
    11881 atgcgcatgc atcatgcgca gcagcaggcc ttactggaag aaatggccgg gcagcctgga
    11941 gtacgttggt ttgcggtcac ggatgaacaa ggaacaatcg tgatgcatag caactccggc
    12001 atggtgggaa aacagattta ttccccgcag gaaatgcagc agttacatcc gggagatgaa
    12061 gaagcgtggc ggcggatcga tagcgcagac ggtgagcctg ttctggaaat ttatcgccag
    12121 tttcaaccga tgtttggtgc tggaatgcac cggatgcgcc atatgcagca gtatgccgcg
    12181 acaccacaag caattttcat cgctttcgac gccagtaata ttgtgagtgc cgaagatcgt
    12241 gagcagagaa acaccctgat tatcctcttc gccctggcga cggtcttgct ggcaagcgta
    12301 ttgtcattct tctggtatcg ccgctatctg cgctcgcgcc agcttctaca agatgaaatg
    12361 aagcgcaaag agaagctggt ggcactgggg catctggcgg caggcgttgc ccacgaaatc
    12421 cgtaatccac tttcctcaat taaagggctg gcgaaatact ttgccgaacg cgcgccagca
    12481 gggggagaag cgcatcaact ggcgcaggtg atggcgaaag aagccgatcg tttaaaccgc
    12541 gtggtaagcg agttgctgga actggttaag ccaacgcatc tggctttgca ggcggtggat
    12601 ctcaacacgc tgattaacca ctcattacag ctggtaagcc aggatgcaaa cagccgggag
    12661 atccagttac gctttaccgc caacgacaca ttaccggaaa ttcaggccga tccggacagg
    12721 ctgactcagg tcctgttgaa tctctatctc aatgctattc aggcgattgt tcagcatggc
    12781 gtgattagcg tgacggtcag cgaaagcggc gcgggcgtga aaatcagcgt taccgacagc
    12841 ggtaagggaa ttgcggcaga tcagcttgaa gccatcttca ctccgtactt caccaccaaa
    12901 gccgaaggca ccggattggg gctggcggtc gtgcataata ttgttgaaca acacggtggt
    12961 acaattcagg tcgcaagcca ggagggaaaa ggctcaacgt tcaccctctg gcttccggtc
    13021 aatattacgc gtaaggaccc acaaggatga cgcacgataa tatcgatatt ctggtggtgg
    13081 atgatgacat tagccactgc actattttgc aggctttact gcgcggctgg ggctataacg
    13141 tcgcgctggc gaacagcggg cgacaggcgc tggagcaggt gcgggaacag gtttttgatc
    13201 ttgtgctttg cgatgtgcga atggcggaga tggacggcat cgccacgctg aaagagatca
    13261 aagcgttaaa cccggcaatt ccggtgctga ttatgactgc gtactccagc gtcgagacgg
    13321 cggtagaggc actgaaaact ggggcgctgg attatctcat caagccgctg gatttcgata
    13381 acctacaggc gacgctggaa aaggcgctcg cgcatacgca cagtattgat gctgaaacac
    13441 ctgcggtgac tgccagccag ttcggtatgg tcggtaaaag cccggcgatg caacacctgc
    13501 tcagtgaaat cgccctcgtc gcgccatcgg aagccactgt gctgatccac ggcgattccg
    13561 gcaccggtaa agagctggtc gccagggcga ttcacgccag tagcgcacgt agcgaaaaac
    13621 cgctggtaac gctcaactgt gcggcactca acgaatcctt gctggaatct gaattgttcg
    13681 gtcacgaaaa aggggcgttt actggagccg ataaacgccg ggaagggcgc tttgttgagg
    13741 cggacggcgg cacgctgttt ctcgatgaaa ttggcgatat ctcgccgatg atgcaggtgc
    13801 gtctgctgcg tgcgattcag gagcgcgaag ttcagcgtgt cggtagcaac cagactatct
    13861 cggttgatgt ccggctgatt gcggcgaccc atcgcgatct tgccgcagag gtgaatgccg
    13921 ggcgttttcg ccaggatctc tactatcgcc tgaatgtggt ggcgattgaa gtaccatcgc
    13981 tgcggcaacg gcgggaagat atccctctgc tggctggcca ttttctgcag cgctttgccg
    14041 agcgtaatcg caaggcggta aaaggtttta ctccccaggc gatggatctg ttgattcatt
    14101 acgactggcc gggaaatatt cgtgagctgg aaaacgcggt ggaacgggca gtggtgctgc
    14161 tgaccgggga atatatttcc gaacgcgagc tgccgctggc gattgccagt acgccgatcc
    14221 cgctggggca aagtcaggat attcagccgc tggtggaagt ggaaaaagag gtgattctgg
    14281 cggcactgga gaaaacgggc ggcaacaaaa ctgaagccgc ccgtcagtta gggatcacgc
    14341 gtaaaacgtt attggcaaaa ctgtcgcgtt agttctgctc gcgttcgata gcacgccagc
    14401 cgatatcttt ccggcagaag cagtcgtccc agtggatatc ggtcattaag gcataggcgc
    14461 gtttctgcgc ttctgccacg gtatgaccca gcgcggtgac gcacagtacg cgcccgccgt
    14521 tggtcactac ctgctcgtca tccgccagtt ttgtgcccgc gtggaacact ttgccgcctg
    14581 ccacttcttc cagcggcagg ccgtggatca cgtcaccggt gcggtaatca cccggatatc
    14641 cacccgcagc catcaccacg ccgagagaag cgcgttcatc ccactcggac gttttctcgt
    14701 ccagtttgct ttcacaggcc gctaggcaga gctcaaccag atcggacttc atgcgcagca
    14761 taatcggctg ggtttccgga tcgccaaagc ggcagttaaa ttcaataacc ttcggattgc
    14821 cctgtttgtc gatcatcagg cccgcgtaga gaaaaccggt gtaggtgttg ccttccgccg
    14881 ccatgccttt cacggttggc cagataatac gttccatggt gcgctgatga acgtcatcgg
    14941 ttactaccgg cgcgggggag taagcgccca tcccgccggt gtttggtccg gtatctttat
    15001 cgcctacgcg tttgtgatcc tggctggtag ccatcggcag cacatgctcg ccgtccacca
    15061 tcacgataaa gctcgcttct tcgccatcga ggaactcttc gataacgatg cgatgacccg
    15121 cgtcgccaaa agcgttgccc gccagcatat cgtgaacagc cgcttccgct tcttccagcg
    15181 tcatcgccac gataacgcct ttcccggcag ccagaccgtc cgctttaatg acgattggcg
    15241 cgcctttctc acgcagatac gccagcgcag gttctacctc ggtgaagttc tggtattccg
    15301 ccgtagggat cttatggcgg gccaggaaat ctttggtaaa cgcttttgag ccttccagtt
    15361 gggccgcacc tgcggttggg ccgaagattt tcagcccggc ggcgcggaag gtatcgacca
    15421 cgcctttcac cagcggcgct tccgggccga cgatggtcag atcaatcttt tcgttttgtg
    15481 cgaaatccaa cagcgccggg atatcggtca cgccaatagc aacgttttgc agcgcgggtt
    15541 ccagcgcagt gcctgcatta cccggagcaa caaaaacagt ctcaaccagc ggcgactggg
    15601 ccgctttcca ggccagcgcg tgctcgcgcc cgccgttacc aatcactaat actttcatct
    15661 attgctccat taatggcgga agtggcgcat gtcggtgaag agcatcgcaa taccgtgctc
    15721 gtcggcggcg gcaatcactt cgtcatcacg gatggaaccg ccaggctgga ttacgcaggt
    15781 cacgcccgca gcggcggcgg catcaatacc gtcgcggaac gggaagaacg cgtcagaagc
    15841 catcgaggaa cctttcactt ccaggccttc atcggcagct ttaataccgg cgattttcgc
    15901 ggagtacacg cggctcatct ggcccgcgcc aataccgatg gtcatattgt ttttggcata
    15961 gacgatagca ttggatttca cgaacttcgc cactttccag cagaacagcg catcgcgcag
    16021 ttcctgttcg gtcggctgac gttgggtgac gacgcgcagt tcttccgcac cgaccatccc
    16081 caggtcacga tcctgaacca gcagaccgcc gttcacgcgt ttgaaatcaa gacccggaac
    16141 acgctcgccc cactgaccgc aggtcagaac gcgtacgttc tgcttggcgg cggtgatttt
    16201 cagggcttct tcgctggcgg aaggcgcaat aatcacttcg acaaactgac gagaaatgat
    16261 ggcctgtgcg gtttccgcat ctagctcgcg gttaaaggca atgatgccgc cgaatgcgga
    16321 ggttgggtcg gttttgtacg cgcgatcgta agcatcaaga atggaattgc cgatagctac
    16381 accgcaaggg ttggcgtgct tcacaatcac acatgccggc tcggcgaact ctttcacgca
    16441 ctccagcgcc gcatcggtat cggcgatgtt gttataagag agggctttac cctgaacctg
    16501 ggttgcggta gcaacggagg cttctttcac attctcttct atatagaagg cagcctgctg
    16561 gtggctgttc tcgccgtaac gcatatcctg cttcttaatg aagttcaggt tcagcgtgcg
    16621 tgggaagcga ccggcggctt ctttgctttc accgtggtac gccggaacca tgctgccgaa
    16681 gtagttggca atcatgctgt cgtaggcggc agtgtgttcg aaggctttga tggcgaggtc
    16741 gaaacgggtt gcaagcgtca gcgatccttc gttgtcatcc atctctttaa taatggcgtc
    16801 gtagtcgctg ctcttcacca cgattgcgac atctttatgg ttcttagcgg cggagcgcac
    16861 catggtcggg ccgccgatat cgatgttctc aaccgcatct tccagcgagc agccttcacg
    16921 agcaacagtc tgggcgaacg gatacaggtt aacaaccacc atatcgatag gctggatctg
    16981 atgttcttcc ataatggcat cgtcctggcc gcgacggccc agaatgccac catgtacttt
    17041 cggatgcagg gtcttcacgc gtccatccat catctccggg aaaccggtgt aatcggaaac
    17101 ttcggttacc ggcagacctt tttctgctaa cagacgggca gtgccccctg tagacagcag
    17161 ctccacaccg cgtgcggaaa gtgcctgggc gaattcgacg ataccggctt tgtcagaaac
    17221 actgagcaga gcgcggcgga ctggacgacg ttgttgcatg gtaaatcccc tggatttgac
    17281 tattacagag agcgttagct gaatttttcg cgaaaaactc agctaacgcc cctaacgggg
    17341 catccttatt tttcgcccgc attgtaacga aaacgtttgc gcaacgctcg cgaatttttc
    17401 tctttcaatg gtgatcacaa ttttgacagt ggttaccgtg ggaaaaatac agaaattaca
    17461 ttgatgattg tggataactc tgtgcgtaaa aaggtataaa gcggggtttt gctggggaat
    17521 gcagcagtca gtcatttttc tgcaattttt ctattgcggc ctgcggagaa ctccctataa
    17581 tgc
//
LOCUS       DADMHC010000069        17502 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.069, whole genome shotgun sequence.
ACCESSION   DADMHC010000069 DADMHC010000000
VERSION     DADMHC010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17502)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17502)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17502
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.069"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(161..892)
                     /gene="rlmB"
                     /locus_tag="JNZ57_001975"
     CDS             complement(161..892)
                     /gene="rlmB"
                     /locus_tag="JNZ57_001975"
                     /EC_number="2.1.1.185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HAY8828203.1"
                     /translation="MSEMIYGIHAVQALQERAPERFQEVFILKGREDKRLLPLIHALE
                     AQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDG
                     VTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLVRT
                     MRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPM
                     AGSVSSLNVSVATGICLFEAVRQRS"
     gene            complement(1073..3514)
                     /gene="rnr"
                     /locus_tag="JNZ57_001976"
     CDS             complement(1073..3514)
                     /gene="rnr"
                     /locus_tag="JNZ57_001976"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HAY8828204.1"
                     /translation="MSQDPFQEREAEKYANPIPSREFILEHLTKREKPASRDELAVEL
                     HIEGEEQLEGLRRRLRAMERDGQLVFTRRQCYALPERLDLVKGTVIGHRDGYGFLRVE
                     GRKDDLYLSSEQMKTCIHGDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTEA
                     GVGFVVPDDSRLSFDILIPPDQIMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNM
                     GTGMAVDIALRTHEIPYIWPQAVEQQVAGLKEEVPEEAKAGRVDLRDLPLVTIDGEDA
                     RDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPPTPLDREARNRGTSVYFPSQVIPMLP
                     EVLSNGLCSLNPQVDRLCMVCEMTVSSKGRLTGYKFYEAVMSSHARLTYTKVWHILQG
                     DQDLREQYAPLVKHLEELHNLYKVLDKAREERGGISFESEEAKFIFNAECRIERIEQT
                     QRNDAHKLIEECMILANISAARFVEKAKEPALFRIHDKPSTEAITSFRSVLAELGLEL
                     PGGNKPEPRDYAELLESVADRPDAEMLQTMLLRSMKQAIYDPENRGHFGLALQSYAHF
                     TSPIRRYPDLTLHRAIKYLLAKEQGHQGNTTETGGYHYSMEEMLQLGQHCSMAERRAD
                     EATRDVADWLKCDFMLDQVGNVFKGVISSVTGFGFFVRLDDLFIDGLVHVSSLDNDYY
                     RFDQVGQRLMGESSGQTYRLGDRVEVRVEAVNMDERKIDFSLISSERAPRNVGKTARE
                     KAKKGDAGKKGGKRRLVGKKVNFEPDSAFRGEKKTKPKAAKKDARKAKKPSAKTQKIA
                     AATKAKRAAKKKVAE"
     gene            complement(3553..3978)
                     /gene="nsrR"
                     /locus_tag="JNZ57_001977"
     CDS             complement(3553..3978)
                     /gene="nsrR"
                     /locus_tag="JNZ57_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide-sensing transcriptional repressor
                     NsrR"
                     /protein_id="HAY8828205.1"
                     /translation="MQLTNFTDYGLRALIYMASLPEGRMTSISEVTDVYGVSRNHMVK
                     IINQLSRAGYVTAVRGKNGGIRLGKPASAIRIGDVVRELEPLSLVNCSSEFCHITPAC
                     RLKQALSKAVQSFLTELDNYTLADLVEENQPLYKLLLVE"
     gene            complement(4183..5481)
                     /gene="purA"
                     /locus_tag="JNZ57_001978"
     CDS             complement(4183..5481)
                     /gene="purA"
                     /locus_tag="JNZ57_001978"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019842885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HAY8828206.1"
                     /translation="MGNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTL
                     VINGEKTVLHLIPSGILRENVTSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSE
                     ACPLILDYHVALDNAREKARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAE
                     KLKEVMEYHNFQLVNYYKAEAVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDF
                     VMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGA
                     GPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLD
                     VLDGLKEVKLCVAYRMPDGREVTTTPLAADDWKGVEPIYETMPGWSESTFGVKDRSGL
                     PQAALNYIKRIEELTGVPIDIISTGPDRTETMILRDPFDA"
     gene            complement(5585..5782)
                     /locus_tag="JNZ57_001979"
     CDS             complement(5585..5782)
                     /locus_tag="JNZ57_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2065 domain-containing protein"
                     /protein_id="HAY8828207.1"
                     /translation="MNSTIWLALALVLVLEGLGPMLYPKAWKKMISAMTNLPDNILRR
                     FGGGLVVAGVVVYYMLRKTIG"
     gene            complement(5864..6868)
                     /gene="hflC"
                     /locus_tag="JNZ57_001980"
     CDS             complement(5864..6868)
                     /gene="hflC"
                     /locus_tag="JNZ57_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HAY8828208.1"
                     /translation="MRKSVIAIIIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDDNK
                     PLVYEPGLHFKIPFIETVKMLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSR
                     YYLATGGGDISQAEVLLKRKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSA
                     GTEDEVTTPAADNAIAEAAERVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTE
                     VSEAIYNRMRAEREAVARRHRSQGQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGD
                     AEAAKLFADAFSKDPDFYAFIRSLRAYENSFSGNQDVMVMSPDSDFFRYMKTPTSATR
                     "
     gene            complement(6871..8130)
                     /gene="hflK"
                     /locus_tag="JNZ57_001981"
     CDS             complement(6871..8130)
                     /gene="hflK"
                     /locus_tag="JNZ57_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HAY8828209.1"
                     /translation="MAWNQPGNNGQDRDPWGSSKPGGNSEGNGNKGGRDQGPPDLDDI
                     FRKLSKKLGGLGGGKGTGSGGGSSSQGPRPQLGGRVVTIAAAAIVIIWAASGFYTIKE
                     AERGVVTRFGKFSHLVEPGLNWKPTFIDEVKPVNVEAVRELAASGVMLTSDENVVRVE
                     MNVQYRVTNPEKYLYSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQR
                     ELEETIRPYDMGITLLDVNFQAARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQ
                     PRANGQAQRILEEARAYKAQTILEAQGEVARFAKLLPEYKAAPEITRERLYIETMEKV
                     LGNTRKVLVNDKGGNLMVLPLDQMLKGGNAPAAKSDNGASNLLRLPPASSSTTSGASN
                     TSSTSQGDIMDQRRANAQRNDYQRQGE"
     gene            complement(8216..9496)
                     /gene="hflX"
                     /locus_tag="JNZ57_001982"
     CDS             complement(8216..9496)
                     /gene="hflX"
                     /locus_tag="JNZ57_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HAY8828210.1"
                     /translation="MFDRYDAGEQAVLVHIYFTKDKDMEDLQEFESLVSSAGVEALQV
                     ITGSRKAPHPKYFVGEGKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVID
                     RTGLILDIFAQRARTHEGKLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQL
                     ETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRIT
                     EARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQ
                     ATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEE
                     NKPIRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKE
                     WMEEDGSVSLQVRMPIVDWRRLCKQEPALIDYLI"
     gene            complement(9573..9881)
                     /gene="hfq"
                     /locus_tag="JNZ57_001983"
     CDS             complement(9573..9881)
                     /gene="hfq"
                     /locus_tag="JNZ57_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HAY8828211.1"
                     /translation="MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVI
                     LLKNTVSQMVYKHAISTVVPSRPVSHHSNNASGGTSSNYHHGSSAQNTSAQQDSEETE
                     "
     gene            complement(9967..10917)
                     /gene="miaA"
                     /locus_tag="JNZ57_001984"
     CDS             complement(9967..10917)
                     /gene="miaA"
                     /locus_tag="JNZ57_001984"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HAY8828212.1"
                     /translation="MSDISKASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSA
                     LIYKGMDIGTAKPNAEELLAVPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIP
                     LLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARI
                     HPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRF
                     HQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATR
                     QLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAIAG"
     gene            complement(10910..12757)
                     /gene="mutL"
                     /locus_tag="JNZ57_001985"
     CDS             complement(10910..12757)
                     /gene="mutL"
                     /locus_tag="JNZ57_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HAY8828213.1"
                     /translation="MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDI
                     DIERGGAKLIRIRDNGCGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASI
                     SSVSRLTLTSRTAEQQEAWQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKF
                     LRTEKTEFNHIDEIIRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGT
                     AFLEQALAIEWQHGDLTLRGWVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQAC
                     EDKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL
                     ETPLPLDDEPQPAPRSIPENRVAAGRNHFAEPAAREPVAPRYTPAPASGSRPAAPWPN
                     AQLGYQKQQGEVYRQLLQTPAPMQKLKAPEPQEPALAANSQSFGRVLTIVHSDCALLE
                     RDGNISLLALPVAERWLRQVQLTPGEAPVCAQPLLIPLRLKVSGEEKSALEKAQSALA
                     ELGIDFQSDAQHVTIRAVPLPLRQQNLQILIPELIGYLAKQSVFEPGNIAQWIARNLM
                     SEHAQWSMAQAITLLADVERLCPQLVKTPPGGLLQSVDLHPAIKALKDE"
     gene            complement(12767..14104)
                     /gene="amiB"
                     /locus_tag="JNZ57_001986"
     CDS             complement(12767..14104)
                     /gene="amiB"
                     /locus_tag="JNZ57_001986"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiB"
                     /protein_id="HAY8828214.1"
                     /translation="MMYRIRNWLVATLLLLCTPVGAATLSDIQVSNGNQQARITLSFI
                     GDPDYAFSHQSKRTVALDIKQTGVIQGLPLLFSGNNLVKAIRSGTPKDAQTLRLVVDL
                     TENGKTEAVKRQNGSNYTVVFTINADVPPPPPPPPVVAKRVETPAVVAPRVSEPARNP
                     FKTESNRTTGVISSNTVTRPAARATANTGDKIIIAIDAGHGGQDPGAIGPGGTREKNV
                     TIAIARKLRTLLNDDPMFKGVLTRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNR
                     SATGASVWVLSNRRANSEMASWLEQHEKHSELLGGAGDVLANSQSDPYLSQAVLDLQF
                     GHSQRVGYDVATSMISQLQRIGEIHKRRPEHASLGVLRSPDIPSVLVETGFISNNSEE
                     RLLASDDYQQQLAEAIYKGLRNYFLAHPMQSAPQGATAQTASTVTTPDRTLPN"
     gene            complement(14123..14584)
                     /gene="tsaE"
                     /locus_tag="JNZ57_001987"
     CDS             complement(14123..14584)
                     /gene="tsaE"
                     /locus_tag="JNZ57_001987"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HAY8828215.1"
                     /translation="MMNRVIPLPDEQATLDLGERVAKACDGATVIYLYGDLGAGKTTF
                     SRGFLQALGHQGNVKSPTYTLVEPYTLDNLMVYHFDLYRLADPEELEFMGIRDYFAND
                     AICLVEWPQQGTGVLPDPDVEIHIDYQAQGREARVSAVSSAGELLLARLAG"
     gene            complement(14556..16103)
                     /gene="nnr"
                     /locus_tag="JNZ57_001988"
     CDS             complement(14556..16103)
                     /gene="nnr"
                     /locus_tag="JNZ57_001988"
                     /EC_number="4.2.1.136"
                     /EC_number="5.1.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ADP-dependent NAD(P)H-hydrate
                     dehydratase/NAD(P)H-hydrate epimerase"
                     /protein_id="HAY8828216.1"
                     /translation="MTDHTMKKNPVSIPHTVWYADDIRRGEREAADVLGLTLYELMLR
                     AGEAAFQVCRSAYPDARHWLVLCGHGNNGGDGYVVARLAKAVGIEVTLFAQESDKPLP
                     EEAALAREAWLNAGGEIHASNIVWPESVDLIVDALLGTGLRQAPRESISQLIDHANSH
                     PAPIVAVDIPSGLLAETGATPGAVINADHTITFIALKPGLLTGKARDVTGQLHFDSLG
                     LDSWLAGQETKIQRFSAEQLSHWLKPRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEA
                     ALRAGAGLVRVLTRSENIAPLLTARPELMVHELTMDSLTESLEWADVVVIGPGLGQQE
                     WGKKALQKVENFRKPMLWDADALNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIES
                     DRLHCAKRLVQRYGGVAVLKGAGTVVAAHPDALGIIDAGNAGMASCGMGDVLSGIIGA
                     LLGQKLSPYDAACAGCVAHGAAADVLAARFGTRGMLATDLFSTLQRIVNPEVTDKNHD
                     ESSNSAP"
     gene            16102..17241
                     /gene="queG"
                     /locus_tag="JNZ57_001989"
     CDS             16102..17241
                     /gene="queG"
                     /locus_tag="JNZ57_001989"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HAY8828217.1"
                     /translation="MSEPLDLNQLAQKIKQWGLELGFQQVGITDTDLSESEPKLQAWL
                     DKQYHGEMDWMARHGMLRARPHELLPGTLRVISVRMNYLPANAAFASTLKNPKLGYVS
                     RYALGRDYHKLLRNRLKKLGEMIQQHCVSLNFRPFVDSAPILERPLAEKAGLGWTGKH
                     SLILNREAGSFFFLGELLVDIPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARR
                     CISYLTIELEGAIPEELRPLMGNRIYGCDDCQLICPWNRYSQLTTEEDFSPRKPLHAP
                     ELIELFAWSEEKFLKVTEGSAIRRIGHLRWLRNIAVALGNAPWDETILTALESRKGEH
                     PLLDEHIAWAIAQQIERRNACIVEVQLPKKQRLVRVIEKGLPRDA"
     gene            complement(17224..17277)
                     /locus_tag="JNZ57_001990"
     CDS             complement(17224..17277)
                     /locus_tag="JNZ57_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828218.1"
                     /translation="MRFYFYSQAVDESGVTR"
BASE COUNT         4008 a         4982 c         4357 g         4155 t
ORIGIN      
        1 gcgccgtcgc cagcgccaac agattccatg tcatatatta ttccatatag atttagttta
       61 aatattaata aaatgaatat ttgcagtacg taattatctt accagctata gacaaaaaaa
      121 aaccatccaa atctggatgg cttttcataa ttcagaggaa ctagctgcgc tgacgcaccg
      181 cttcaaataa gcaaattccg gttgcaaccg aaacgttcag agaagaaaca cttcctgcca
      241 ttgggatgct gatcaactca tcgcaatgtt cacgggtcag gcgacgcata ccttcacctt
      301 ccgcgcccat caccagcgcc aggcgtccgg tcattttgct ctgatagagt gtatgatccg
      361 cctcacctgc cgtaccgacg atccagatat tctcttcctg caacatacgc atggtacgca
      421 ccaggttagt cacccgaatc agcggaacgc tttctgccgc gccacaggcc acttttttcg
      481 ccgtggcgtt gagctgggcg gagcgatctt tcggcacaat caccgcatga acaccagcgg
      541 catctgcgct acgcaggcac gcgccgaggt tatgcggatc ggttacaccg tcgaggatca
      601 gcaggaacgg ctgatcgagc gaagcgatca gatccggcaa atcattttcc tggtactgac
      661 gtcctggctt cacgcgggcg ataatgccct gatgcacggc accgtcgctt ttctcgtcga
      721 gatattggcg gtttgccagc tggataacca cgccctgggc ttcgagggcg tgaatcagcg
      781 gtaacagacg tttatcttca cggcctttta aaataaagac ttcctgaaaa cgttcagggg
      841 cgcgctcctg cagggcctgc actgcgtgga tgccgtaaat catttcgctc attaatgtac
      901 tcgttgttta cgttttgcct gatgcactac gtttatccgg cctacatgat ctctgcaata
      961 tattgaattt gcgtgattat gtaggccgga taaggcgttc acgccgcatc cggcatgaac
     1021 aaagcgcatt ttgtcagcaa tctaaccctc ttctgtttga agagggtaat gatcactctg
     1081 ccactttttt cttcgccgca cgcttcgctt tggtcgcagc agctattttc tgcgttttcg
     1141 ccgatggctt tttcgctttt ctcgcgtctt tcttcgctgc tttcggcttc gtttttttct
     1201 caccgcggaa ggcgctgtct ggctcaaagt ttaccttttt accgaccaga cgacgcttgc
     1261 cgcctttttt acctgcatcg ccttttttcg ctttctcgcg cgccgtttta ccgacgttgc
     1321 gcggtgcgcg ttcgctggag atcaggctaa agtcgatttt gcgctcgtcc atattaaccg
     1381 cttcgacgcg aacttccacg cgatcgccca gacgataagt ctggccgctg gattcaccca
     1441 tcagccgttg ccctacctgg tcaaagcgat agtagtcatt gtccagcgaa gagacatgga
     1501 ccagaccatc aatgaataag tcgtccagac ggacaaagaa tccaaagcca gtgacgctgg
     1561 aaattacgcc tttaaagacg ttacctacct ggtcgagcat gaagtcacac ttcagccagt
     1621 cagccacatc gcgcgttgct tcgtcggcac gacgttccgc catcgaacag tgctgaccca
     1681 gttgcagcat ttcttccatc gaataatggt agccgccggt ttcagtggtg ttgccctgat
     1741 gcccctgctc tttcgccagc agatatttaa tggcgcggtg cagcgtcagg tctggataac
     1801 gacgaatcgg cgaagtaaag tgcgcatagg actgcaatgc caggccaaag tgaccacggt
     1861 tttctggatc gtaaatcgcc tgtttcatcg agcgcagcag catggtttgc agcatttctg
     1921 catcaggacg atcggcaacc gactccagca gctccgcgta gtcacgcggt tccggcttgt
     1981 taccgcccgg cagttccagc cccagctccg ccagtactga acggaaagag gtaatcgctt
     2041 cggtgctcgg cttgtcgtga atacggaaca atgctggttc tttggctttc tcaacgaaac
     2101 gcgccgccga gatattcgcc agaatcatgc actcttcaat taacttgtgt gcgtcgttac
     2161 gctgagtctg ttcgatacgc tcaatacggc attcagcgtt gaaaataaac ttcgcttctt
     2221 cgctctcaaa tgagatcccg ccacgttctt cacgggcttt atccagcact ttatagaggt
     2281 tatgcaactc ttcgagatgc ttaaccagcg gagcgtactg ctcgcgcaga tcctgatcgc
     2341 cctgcagaat atgccagact ttggtgtagg tcagacgcgc gtgagagctc atcaccgctt
     2401 cgtagaattt gtagcccgtc aggcggcctt tcgacgaaac cgtcatctcg cacaccatac
     2461 acaggcggtc tacctgcgga ttgagcgagc acagaccgtt agagagcact tccggcagca
     2521 tcgggataac ctgcgaaggg aagtacaccg acgtaccacg attacgcgct tctctatcca
     2581 gcggcgttgg cggacgcaca tagtagctga cgtcggcaat cgcgacccat aaacgccagc
     2641 cgccgccgcg ttttttctcg cagtaaaccg catcgtcaaa gtcacgggcg tcttcgccat
     2701 caatggtgac cagcggtaaa tcgcgcaaat cgacacggcc cgcttttgct tcttccggca
     2761 cttcttcttt cagcccggca acctgttgct caacagcctg cggccagatg tacggaattt
     2821 catgggtacg caaagcgata tcaaccgcca tgccggtgcc catattgtcg cccagcactt
     2881 cgacgatttt acccaccgct ttggtacggc gagtcgggcg ttgggtcagt tcaacaacca
     2941 ccacaaagcc catccgcgcg cccatgatct gatcgggcgg gattaagata tcgaagctca
     3001 gacggctatc gtcaggaacc acaaagccga cgcccgcttc ggtaaagtag cgaccaacaa
     3061 tctggctggt ttttggcacc agtacgcgga caatacgcgc ttcacgacga cctttacggt
     3121 cagcacccag cggctgagcc agcacctgat cgccatgaat gcaggttttc atctgctcgc
     3181 tggagagata caaatcatct ttacgccctt caacccgcag aaagccgtag ccatcacggt
     3241 ggccaataac ggtacctttc accaggtcga ggcgttccgg cagcgcatag cactgacgac
     3301 gagtgaagac cagttgacca tcgcgctcca tcgcgcgcag gcggcgacgc aggccttcaa
     3361 gctgctcttc gccttcaatg tgcagttcta ccgccagctc atcacggctg gccggttttt
     3421 cacgtttggt taaatgttcg aggataaatt cccgactagg gatgggattc gcgtattttt
     3481 cagcttcgcg ttcctggaaa ggatcttgtg acatctcggt tcctccgttg tcatctctga
     3541 tgaagatttt cgtcactcca ccagcaataa tttataaagc ggttgattct cttcaaccaa
     3601 atcggcaagc gtgtagttat ccagttccgt aagaaaactt tgcacggcct tagaaagcgc
     3661 ctgtttcaac cgacaggcag gtgtaatgtg gcaaaactca ctgctgcaat tcaccagcga
     3721 taagggctcc agctcgcgca ccacatcacc aatacgtatc gcactcgccg gtttacccaa
     3781 gcgaatgccg ccattttttc cacgaacagc agtcacgtag ccggcacgac taagttgatt
     3841 gattattttg accatatgat tacgggagac gccgtagacg tcagtcactt cagaaatact
     3901 ggtcatccgc ccttctggca atgacgccat gtagatcagc gcacgtaatc cgtaatcagt
     3961 gaaattcgtt aactgcacat caacctcaaa agggaaatcg ggaaaaaata catttatatt
     4021 gatgataaac cagccacaag ctgtgtcgct aatttatttc agttcgggga aggaaaaaag
     4081 cgaggattta acactgtgtc ggatagcgta atggcttaac cgacacagca atgtatcaca
     4141 ctgttagccc ggcaggcaaa atatctgcca ggcgtaccag aattacgcgt cgaacgggtc
     4201 gcgcagaatc atagtttcag tacgatccgg accggtagag atgatatcga tcggcacacc
     4261 ggtcagctct tcaatacgct tgatgtagtt cagcgccgcc tgcggcagcc cgctacgatc
     4321 tttcacgccg aaagtggatt cagaccagcc cggcatggtt tcgtaaatcg gctctacacc
     4381 tttccagtcg tcagctgcca gcggagtggt agtcacttcg cgaccatccg gcatacggta
     4441 agccacgcag agtttaacct ctttcaggcc atccagaacg tccagtttag tcaggcagaa
     4501 gccagacagg gagttcagct gtaccgcacg acgaacggca acggtgtcca gccagccggt
     4561 acgacgacga cgacccgtcg ttgcgccgaa ttcgttaccc tgcttgcaga ggaactcgcc
     4621 agtttcatca aacagttcgg tcgggaaagg acctgcaccc acacgagtgg agtaagcttt
     4681 gaggataccc agaacgtaat caacataacg cgggcccagg ccggaaccgg tcgccacgcc
     4741 accagcagtg gtgttggaag aagttacgta cggataagta ccgtggtcga tatccagcag
     4801 cgtaccctgc gcaccttcaa acatgacgaa atcgccacgc tgacgcgcct ggtcgagcag
     4861 gtcagaaacg tcaaccacca tagaagtcag gatgtcggca acagccatcg tatcatccag
     4921 aactttctgg taatcaaccg cttcagcttt gtagtagtta accaactgga agttgtgata
     4981 ttccatcact tctttcagtt tttcagcgaa ggtttctttg tcgaaaaggt cgccaacacg
     5041 cagaccgcga cgtgccactt tatcttcata agcaggcccg ataccacgac cggtggtgcc
     5101 gatcgctttc gcgccacgcg ctttctcacg cgcgttatcc agcgcaacgt gataatcaag
     5161 gatcagcgga catgcttcag acagcagcag acgctcacga acggggatgc cacggtcttc
     5221 cagttctttc atctctttca tcagcgcggc cggagacagc acaacaccgt taccgatgat
     5281 gctggttaca ttctcgcgga gaatacctga tggaataaga tggagaacgg ttttttcacc
     5341 gttgattacg agagtatggc ctgcgttgtg accgccctgg tagcgtacaa catatttagc
     5401 ccgttcagtc agaagatcga cgatcttacc tttaccttcg tcaccccatt gggtgcccag
     5461 tacgacgacg ttgttaccca tttttcaaaa tcaccgtttg cttaaaaatg gattctacca
     5521 tcgctttttc agagttacag cactttttgc actcaaaaat gacctcgatc agtctgtttt
     5581 ttgttcagcc aatcgttttc ctcaacatgt agtagaccac aacgcccgca accacaagtc
     5641 caccgccaaa acgacgtaaa atattatcgg gcaaattggt catcgcagag atcatcttct
     5701 tccatgcctt cgggtaaagc atcggcccta aaccttccag taccaaaacc agggcaagcg
     5761 ccagccagat tgtcgaattc attcattatc cttatagaaa aagaaaacca ccgacatccc
     5821 tgaggatacg gtggctttat tgacctgtac cgcagtcgtt atattaacgc gttgcggaag
     5881 tcggcgtctt catgtagcgg aagaaatcgc tatccgggct catgaccatc acgtcctgat
     5941 tgccagagaa gctgttctca taagcacgca ggctacggat gaatgcgtag aagtccggat
     6001 ctttactgaa tgcatcagca aacagtttgg ctgcttcggc atcgccttca ccacgcatga
     6061 tgcggccctg acgctcagct tctgccagcg ttctggtcac ttcatagtcg gcagtcgcgc
     6121 gcagtttttc cgcttcttcc tgaccttgtg aacggtgacg acgcgctacc gcttcacgct
     6181 cggcgcgcat acggttgtag atcgcttcag acacttcggt cggcaggttg atctgcttga
     6241 tacgcacatc gacaacttca atacccagcg ccgccatact gttcgggttg atgaccggaa
     6301 ctttgccctt cgtctcagcc gttacgcgct ctgccgcttc ggcaatggcg ttatctgctg
     6361 ccggggtagt aacttcatct tctgtacccg cagaaccgga gttcagcgcg tcacgtactt
     6421 cgagggtcag acgaccacgg gaatcagtga cgatatcttt cacgtccagg cgaccaattt
     6481 cagaacgcag acggtcagag aacttacgtt tcaacagcac ttccgcttgc gaaatgtcgc
     6541 caccacccgt tgccaggtag taacggctga aatcgctgat gcgccatttg atgtaagagt
     6601 cgacgatcag gtctttcttc tctttggtca caaagcggtc ggcctggttg tccatggtct
     6661 gaatacgtgc gtcgagcatt ttcaccgttt caatgaacgg tatcttgaaa tgcagacccg
     6721 gctcataaac cagaggtttg ttgtcatcgt cacgcagtac cttaccaaaa cgcagcgtaa
     6781 taccgcgctc accttctttg acgacaaaga cagacatgta aagcactacc agcacgatga
     6841 tgataatcgc gataactgac ttacgcatcg ttattccccc tgacgctggt agtcgttacg
     6901 ctgcgcgttg gcgcggcgtt ggtccataat atcgccctga ctggtggacg acgtgttgct
     6961 tgctccactg gttgtggagg aagaggctgg cggcaaacgc agcagattgc tggcaccgtt
     7021 atcgctcttc gccgcagggg cgttaccacc tttcagcatc tggtctaacg gcagaaccat
     7081 caggttgcca cctttatcgt taaccagcac tttgcgggtg ttacccaaca ctttttccat
     7141 cgtctcgata tacagacgct cgcgagtaat ttccggcgcg gctttatatt ccggcagaag
     7201 tttagcaaag cgcgccactt caccctgagc ttccaggatg gtctgggcct tgtacgcacg
     7261 cgcctcttcg aggatacgtt gcgcctgacc gttcgcacgc ggctgaactt cgttggtata
     7321 cgcttctgct tcacgaatgt attgctgttc gttttcacgc gcggcaatcg catcgtcaaa
     7381 cgccgctttt acttcttccg gcggacgagc agcctggaag ttgacgtcca gcagagtgat
     7441 gcccatgtca tacggacgaa tcgtctcttc cagttcgcgc tgggtatcgc tacgaatcac
     7501 ggtacgacct tccgtcagaa tgcggtccat ggtgtattta ccgataaccc cgcgcagggc
     7561 gctgtcggta gcctgacgca ggctgtcatc cgggctggtc acgctataca gatatttttc
     7621 cggattggta acgcggtact gcacgttcat ctcaacgcgc actacgttct cgtccgacgt
     7681 cagcatcaca ccggaagcgg ccagttcacg cacggcttcc acgtttaccg gtttgacttc
     7741 gtcgataaac gtcggtttcc agttcagacc cggctcaacc agatggctga atttaccaaa
     7801 gcgtgttacc acgccgcgtt cggcttcttt aatggtatag aaaccactgg ccgcccagat
     7861 aatgacaatc gctgccgctg cgatggtaac gacacgaccg ccaagctgcg ggcgcgggcc
     7921 ttgcgatgaa ctgccaccgc cagatccggt gcctttaccg ccgcccagac caccgagctt
     7981 tttgctcagt ttgcggaaga tatcatctaa atcaggtggc ccttgatcgc gaccgccttt
     8041 gtttccattt ccctcagagt tgccgccagg tttgctgctt ccccacgggt cgcggtcttg
     8101 tccgttatta ccgggctgat tccacgccat gtttgtgctc catatttgtt atgcggtgat
     8161 ccctgttgtc tttcgacgcc agaggatatg actccacgct tcagacgcta cgccgttaga
     8221 tcaggtaatc gatcaacgcc ggttcttgtt tacagaggcg acgccagtca acgatcggca
     8281 tacgaacttg cagacttacg ctgccgtcct cctccatcca ctctttttct attgcctgaa
     8341 gctgataaaa acgacttctc agacgccctt cctgcggtgg cagacgcaat gtatgctgcg
     8401 ccacctcgcc ggaaagccgc tccgtcaaag cctgaaaaag ctgtggtatc cccgctccgg
     8461 tctgtgcgga aagccagaca cggatcggtt tgttctcttc gtcccgatca atacgcggtt
     8521 cgaaatcttc cagcatatcg atcttgttca tcaccagcag ggttgggatc tcgtgagcgt
     8581 cgatctcttc aagaaccgta ttcaccgctt cgatgttttc ttgtacacgc acatccgccg
     8641 catcaatgac gtgcagcagt aatgtggctt gccgcgtctc ttgtaacgtg gctttaaatg
     8701 ccgccaccag atcgtgcggc agatggcgaa taaaccctac ggtatctgca agtacggttt
     8761 caccgacatc cgcgacgtca atacgccgca acgtcgggtc gagggtggca aacaactggt
     8821 ctgccgcgta gacccgcgct tcggtgatgc gattgaaaag ggtagattta ccggcgttgg
     8881 tatatcccac cagcgaaaca gtaggaacgt cggctttgat acgcgattgc cgcccctgct
     8941 cacgctgctt ttcaactctt tccaggcgcg actgtatctg cacgatgcga ttacgcaaca
     9001 aacgacggtc ggtttcgagc tgggtttcac ccggaccacg caaacctatc ccgcctttct
     9061 gtctttcaag gtgggtccag ccacgcacca ggcgcgtagc cagatggcgc agctgcgcca
     9121 gctcaacctg caacttaccc tcatgggtac gcgcacgttg ggcgaaaata tctaaaataa
     9181 ggccggtgcg gtcgatgact cgacactcgc acaaacgctc caggttacgc tcttgcgccg
     9241 ggctcagggc atggtcaaaa agaacgaccg aagcacccgt cgctttgaca gcttccgcaa
     9301 tttcaactgc tttaccttca cctacaaaat actttgggtg cggcgcttta cggctaccgg
     9361 taatcacctg caatgcttcg acaccggcgg aagaaaccag agattcaaac tcctggaggt
     9421 cttccatatc tttgtctttc gtaaaataga tgtgtaccag taccgcctgc tcaccagcat
     9481 cataacggtc aaacaagcgt ataaccctct aaatagatca gcggggaacg caggatcgct
     9541 ggctccccgt gtaaaaaaaa cagcccgaaa ccttattcgg tttcttcgct gtcctgttgc
     9601 gcggaagtat tctgcgcgct gctaccatga tggtagttac tgctggtacc gccactggcg
     9661 ttgttactgt gatgagaaac cggacgagac gggacaacag tagaaatcgc gtgcttgtaa
     9721 accatctggc tgaccgtgtt tttcaacagg atcacgaact gatcaaaaga ctcgatttgc
     9781 ccttgcagct taataccatt caccaaataa atagaaactg gaacacgttc ccgacgcagt
     9841 gcgttcagga acggatcttg taaagattgc cccttagcca ttctctcttt tccttatatg
     9901 cttatttgta ctttgaacct ttcgattctg aaaaaattgc gcacgatacg tctcaattgt
     9961 acacattcag cctgcgatag caccaacaac ctgtaatact tcgtcacgcg cctgttctgg
    10021 tttttcactg tcaagccagt gaaccccttc ccaaccacgc agccaggtta tctgccgctt
    10081 cgccaactgt ctcgtggcgc aaacacctcg ataaaccatt tcatcgtatg agatttcgcc
    10141 ttcaaggtaa gaccacatct ggcgataacc cacgcaacga atggaaggca agtccgtatg
    10201 caaatctcct cgggcaaaaa gcgcccggac ttctgcttca aaacctgaag ccaacatctg
    10261 atgaaaacgc tgctcaatgc gttgatggag cagttcacgg ctcgccgggg cgatggcgaa
    10321 ctgatgcacc tgatacggta gagcgtctcc tgacgtttgc gtcagttccg ttaaagtttt
    10381 acccgaaatg aaaaaaactt ccagtgcccg ggaaagcctt tgtggatcat ttggatgaat
    10441 ccttgctgcc gcaaccggat ctacctcctg aagttgacga tgcaatgact cccaaccttg
    10501 ctctgccgcc tgttgctcaa ttctggcccg cacttccggg tctgccgacg gtagcggcga
    10561 caacccttcc agcaatgcct tgaaatacaa catcgtaccg cccactaaca gtgggatccg
    10621 ccccgccgcg gtgatatcgg ccatttccgc cagcgcatcg cggcgaaaat cagcagccga
    10681 gtaagcctgc gacggatcgc gaatatccag caatcggtgc ggcacggcga gtaactcttc
    10741 agcgttcggc ttcgccgtcc cgatatccat ccctttgtaa ataagggcag aatcaacgct
    10801 tatcaactct actggtaaaa ttttacgcag ctcaatggct aacgccgttt taccggaggc
    10861 cgtcggcccc atcaaaaaaa tcgccttagg caggctcgcc ttactgatat cactcatctt
    10921 tcagggcttt tatcgccgga tgtaaatcaa cagattgtaa cagaccaccc ggcggcgttt
    10981 tcacaagttg cggacataac cgttccacgt ccgccagcag ggttatggcc tgtgccattg
    11041 accactgcgc atgttcgctc atcagatttc gtgcaatcca ctgcgcaata ttgccaggtt
    11101 cgaatacgga ctgcttcgcc aggtagccta tcagttcagg aatcaagatt tgtaaatttt
    11161 gttggcgtaa gggtaaaggc acggccctga tggtcacatg ctgtgcatct gactggaaat
    11221 caatacccaa ttccgccagg gcagactgcg ctttttctaa tgccgatttt tcttcgccag
    11281 aaacttttag ccgcaacgga ataagcagcg gctgagcgca aactggcgct tcacccggcg
    11341 tcagttgtac ctgacgtagc caacgttctg ccactggcaa ggctaaaagt gaaatgttgc
    11401 cgtcgcgctc cagcaacgca cagtcggaat ggacgatagt cagtacccga ccaaaactct
    11461 gactgttcgc cgcaagtgca ggttcctgcg gttccggcgc ttttaatttt tgcatcggcg
    11521 cgggcgtttg caaaagctgg cgatacactt caccttgctg tttctggtag cctagctgcg
    11581 cattcggcca aggggcagcc ggacgactgc ctgatgctgg cgcaggagtg tagcgcggag
    11641 ctaccggctc acgagctgcc ggttctgcaa agtgattgcg ccccgccgcc acgcggtttt
    11701 ccggaatgga acgcggtgca ggttggggtt catcgtccag cggtagcggc gtttccagtt
    11761 gctgttgtag cacgctcagc acgccctgat agataaaatc atgcaccaga cgcgactgat
    11821 ggaaacgcac ttcgtgtttg gcggggtgca cgttgacgtc cacctgatgc ggatcgatct
    11881 ccagatacag cacaaatgcc ggttgctgat cggcccccag tttgtcttcg caggcctggc
    11941 ggatcgcgtg attgatcagg cgatcgcgca tcatgcgacc gttcacgtag caatactgaa
    12001 tttctgccag tgcgggcgtg gtgtgatttg gatcggccac ccagccgcgt agcgtgagat
    12061 cgccgtgttg ccattcaatc gccagcgctt gttcaagaaa agcagtgccg caaatcgcgc
    12121 ctaagcgccg ttctttttgc ccgccttccg gcactgcgcg gtactgacgc acaattttac
    12181 cgttatgcga caggttgatc gtgacgtcga aacgcgccag cgcaatgcgg cggatgatct
    12241 catcaatgtg gttaaattcg gttttctcgg tgcgcaggaa tttgcgccgc gccggggtgt
    12301 tgtagaacag atccagcacc tccagcgtcg tccccacagg atgcgccgcc ggttttaccg
    12361 tcacgttcat atcgcgccct tcggcatagg cctgccaggc ttcctgctgt tctgcggtgc
    12421 gtgaagtgag cgtcaggcgg gaaaccgaac tgatactcgc cagcgcctca ccgcgaaagc
    12481 ccaggctgat aatggcttcg agatcgtcca gagaggcgat tttactggtg gcatgacgag
    12541 ccagcgccag cgccagctca tcttttttga taccgcagcc gttatcacga atgcggataa
    12601 gtttcgcccc accgcgttcg atatcaatat cgatacgcgt cgcacctgca tcgaggctgt
    12661 tttccaccag ttctttgact accgacgcag gtcgctcgac cacctcacct gcggcaatct
    12721 ggttcgccag ttgtggcggt aagacctgaa ttggcatcaa tcgtccttag tttggcagcg
    12781 tgcgatctgg cgtcgtcacc gtactggccg tttgtgccgt tgcaccctgc ggcgcagatt
    12841 gcatcggatg cgcaaggaaa taattgcgca ggcctttgta aatggcttct gccagctgtt
    12901 gttggtaatc gtcgctcgcc agcaaacgtt cttcgctgtt gttgctgata aaaccggttt
    12961 cgaccagtac tgacgggata tccggcgaac gcagaacgcc gagactcgcg tgttctggtc
    13021 ggcgtttatg tatttcgcca atgcgttgca actgactgat catactggtc gctacatcat
    13081 accctacccg ctgggaatga ccgaactgta aatccagcac cgcctggctt aaatagggat
    13141 cagactgact gttcgccagc acatcgcccg ccccacccag cagctccgaa tgtttctcgt
    13201 gctgctccag ccagctggcc atttcgctgt tggcgcgacg gttagagagc acccatacgg
    13261 aagcgccagt cgcactgcgg ttcggtgcgg catcagcgtg aatagacacg aggaaattag
    13321 cgttttgctt acgtgccaca tcgctgcgcc ccatcaccga aataaagtaa tccccgtcac
    13381 gggttaaaac gcctttaaac atcggatcgt cattgagcaa agtacgcaat ttacgcgcga
    13441 tggcgatggt gacatttttc tcccgcgtac caccggggcc gatagcgcca gggtcctgac
    13501 cgccgtgtcc ggcatcaata gcgatgataa ttttatcgcc agtgttagcc gtcgcgcgcg
    13561 ctgccggacg cgttaccgta ttactgctga taacacccgt agtgcggtta ctttccgttt
    13621 taaacggatt gcgcgccggt tcgctgacgc gcggtgcgac aaccgcaggc gtttcaacgc
    13681 gtttcgcaac cacgggcggc ggaggaggcg gtggcggcac atcggcgtta atcgtaaaga
    13741 cgacagtgta attgctgcca ttctgccgct tcaccgcttc ggttttacca ttttcggtaa
    13801 gatcgaccac cagccgtagc gtttgtgcat ctttaggcgt tccagagcga atcgccttca
    13861 ccagattatt gccgctgaac aacaacggca gtccctgaat cacgcccgtt tgtttgatat
    13921 cgagcgccac ggtgcgtttg ctttgatggc taaacgcata atcaggatcg ccaataaaac
    13981 tcaacgttat ccgcgcctgt tgattaccgt tagaaacctg aatatcagag agcgtcgcgg
    14041 cacccaccgg cgtgcacagc agcagcagcg tcgctaccaa ccaatttctg atgcgataca
    14101 tcatcccgcc acctttcaaa ggttaaccgg ctaaacgcgc cagcaacaat tcacccgcag
    14161 aggaaaccgc actcacgcgc gcctcacggc cttgtgcctg ataatcaatg tgtatttcga
    14221 catccgggtc aggaagaaca cctgtacctt gttgtggcca ctccaccagg cagatggcat
    14281 cgttggcaaa ataatcgcgg atccccataa actccagctc ctcgggatcg gcaaggcggt
    14341 acaaatcaaa gtgataaacc attaaattgt cgagcgtata gggttcgacc agcgtataag
    14401 tggggctttt gacattaccc tgatgaccca gagcttgtaa aaagccccgg ctaaaggtgg
    14461 tcttacctgc gcctaaatcg ccatacagat agattacggt tgcgccatcg caggctttcg
    14521 ctacccgctc gcccaggtct aatgttgcct gctcatcagg gagcggaatt actcgattca
    14581 tcatggtttt tatcagtcac ttccgggtta acaatacgct gtagcgtgga aaagagatcg
    14641 gttgccagca tcccgcgcgt tccaaaacgc gccgccagta cgtcagctgc cgcaccgtgc
    14701 gcgacacagc ccgcacaggc ggcatcatac ggcgacagtt tttgcccaag caatgcgcca
    14761 ataataccag agagcacatc gcccatgccg cagctcgcca tgcctgcatt tccggcatca
    14821 ataatgccta aagcgtcagg atgggcggcg accacggttc cggcaccttt cagcaccgct
    14881 acgccgccat aacgttgtac cagacgtttg gcgcaatgta agcggtcact ttcaatttca
    14941 gcgacggaac agcctaacaa ccgtgcggcc tcgccaggat gcggcgtgat cacgcgattg
    15001 tgacgcttat cgggattgat tgccagcagg ttcaatgcat cggcatccca caacatcggt
    15061 ttgcgaaaat tctcaacttt ttgcagtgct tttttccccc actcttgctg gcccagaccg
    15121 ggaccaatca ccaccacatc ggcccattcc aggctttcgg taagagagtc catcgtcagt
    15181 tcatgcacca tcaattccgg tcgtgcagtc agcagcggcg caatgttttc actgcgggtc
    15241 agtactcgga ctaaaccagc accagcacgc agcgccgctt cccccgtcat acgaatagcc
    15301 cccgccgtgc cgtgatcgcc accgataatt accagccgcc cgtgatcgcc tttatgcgaa
    15361 gtcgggcgac gcggttttag ccagtgagaa agttgttctg ctgaaaaccg ctgaattttc
    15421 gtctcctgac ctgccagcca actatccagc cccagtgagt caaaatgcag ttgtccggta
    15481 acatcccgcg cttttccagt gagcaagcct ggtttcagcg caataaaagt gatggtgtga
    15541 tcggcgttga tcaccgcgcc tggcgtagcg ccagtttcag ccagcaggcc ggaagggata
    15601 tcaaccgcca caatcggcgc aggatgggaa ttagcgtggt cgattaactg gctaatggat
    15661 tcgcggggcg cttgccgcaa accggtaccg agcagcgcat caacaatcag atctaccgat
    15721 tcgggccaga caatattcga agcatggatc tcgccacccg cgtttaacca tgcttcgcgt
    15781 gccagcgcgg cctcttccgg caacggtttg tcgctctcct gggcaaacaa cgtgacctca
    15841 atgccgaccg ctttggccag tcgcgcgacc acgtagccat cgccgccgtt attaccatga
    15901 ccgcacagca ccagccagtg gcgggcgtca ggatacgccg aacgacacac ctggaatgcg
    15961 gcctcgccag cgcgaagcat cagctcatag agtgtgagcc ccagcacatc tgccgcctcg
    16021 cgttctccgc ggcggatatc gtcggcgtac cagacggtgt gtggtatact tacggggttt
    16081 ttcttcattg tatggtccgt catgtcagag cccctcgatc tcaatcagtt agcgcaaaaa
    16141 attaaacagt gggggctgga actgggcttt cagcaggtag gtattaccga taccgatctc
    16201 agcgagtccg agcccaaact gcaagcatgg ctggacaaac aataccacgg cgaaatggac
    16261 tggatggcac gtcacggtat gctgcgcgct cgccctcatg agttattgcc cggtacgctg
    16321 cgcgtgatca gcgtgcggat gaattacctt cctgctaacg ccgcatttgc cagcacgctg
    16381 aaaaacccca aactcggcta tgttagccgt tatgcgctgg gccgtgacta tcacaaactt
    16441 ctgcgcaacc gactcaaaaa gctgggcgag atgattcagc aacattgtgt ttcgctgaat
    16501 tttagaccgt ttgtcgattc tgcgcctatt ctcgagcgcc cgttagctga aaaagctggg
    16561 ctcggctgga caggtaagca ctcacttatc ctcaatcgcg aggccggttc gttcttcttt
    16621 ttaggcgaat tgctggtcga tattccgctg cccgtggatc aaccagtcga ggaaggatgc
    16681 ggtaaatgcg tggcctgtat gacgatttgc ccgaccggtg ccatcgtcga gccatatacc
    16741 gtcgatgctc gccgctgtat ctcttatctc accatcgaac ttgaaggggc gatcccggaa
    16801 gagttgcgac cgttaatggg aaaccgtatt tacggttgcg atgactgcca gcttatctgc
    16861 ccgtggaatc gctattcaca actcaccaca gaagaggatt tcagcccgcg taagccgcta
    16921 cacgcaccgg aactcattga gttattcgcc tggagcgaag agaagttttt aaaagtcacg
    16981 gaaggatcgg cgattcgtcg tattggtcac ctgcgttggc tgcgtaatat cgccgtagca
    17041 ttaggcaatg ccccttggga tgaaacgatt ttgacagcgc tggaaagtcg taaaggtgag
    17101 cacccacttc tcgatgagca catagcgtgg gcgattgcgc agcaaataga gagacgaaat
    17161 gcgtgcatag tcgaagtgca attgccgaaa aaacagcgtc tggttcgggt gattgaaaaa
    17221 gggttaccgc gtgacgcctg attcatccac agcttgtgaa taaaaataaa aacgcattgc
    17281 aattcaagac gaataaaatc gtcaagtgat cgactcgaca aaacggaatc ttaattttta
    17341 acttatctat caataggtta aaaaaatact attcaccgtg cgaagtttct ttgaaattaa
    17401 gattacagcc tgaggctgtg gataactctg tttacaagag tttgtcagag acaacgaaaa
    17461 ccagcaataa cgcatcgctg tggatatttt attgagagaa ga
//
LOCUS       DADMHC010000070        17498 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.070, whole genome shotgun sequence.
ACCESSION   DADMHC010000070 DADMHC010000000
VERSION     DADMHC010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17498)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17498)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17498
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.070"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(48..2645)
                     /gene="topA"
                     /locus_tag="JNZ57_001991"
     CDS             complement(48..2645)
                     /gene="topA"
                     /locus_tag="JNZ57_001991"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HAY8828219.1"
                     /translation="MGKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTSGSAA
                     KKSADSTSTKTAKKPKKDERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAEK
                     ADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNID
                     RVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEE
                     FWEVDASTTTPSGEALALQVTHQNDKPFRPVNKEQTQAAVSLLEKARYSVLEREDKPT
                     TTKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNM
                     VRGYISDNFGKKYLPESPNQYASKENSQEAHEAIRPSDVNVMAESLKDMEADAQKLYQ
                     LIWRQFVACQMTPAKYDSTTLTVGAGDFRLKARGRILRFDGWTKVMPALRKGDEDRIL
                     PAVNKGDALTLVELTPAQHFTKPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRG
                     YVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTAQMENSLDQVANHEAEWKAVLDH
                     FFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCPTCGRKMGIRTASTGVFLGCSGYAL
                     PPKERCKTTINLVPENEVLNVLEGEDAETNALRAKRRCPKCGTAMDSYLIDPKRKLHV
                     CGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHLKMGRFGKYMACTNEECKNTR
                     KILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVFLAANTFPKSRETRAPLVE
                     ELYRFRDRLPEKLRYLADAPQQDPEGNKTMVRFSRKTKQQYVSSEKDGKATGWSAFYV
                     DGKWVEGKK"
     gene            3026..3277
                     /locus_tag="JNZ57_001992"
     CDS             3026..3277
                     /locus_tag="JNZ57_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciN family protein"
                     /protein_id="HAY8828220.1"
                     /translation="MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLV
                     FTGDYFLDEQGLPTAKSTAVFNMFKHLAHVLSEKYHLVD"
     gene            complement(3313..4362)
                     /gene="sohB"
                     /locus_tag="JNZ57_001993"
     CDS             complement(3313..4362)
                     /gene="sohB"
                     /locus_tag="JNZ57_001993"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HAY8828221.1"
                     /translation="MELLSEYGLFLAKIVTVVLAIAAIAAIIVNVAQRNKRQRGELRV
                     NNLSEQYKEMKEELAAALMGSHQQKQWHKAQKKKHKQEAKAAKAKAKLGEVATDSKPR
                     VWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQVVLRLESPGGMVHGYGLAASQLQR
                     LRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKSKY
                     IDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMRPSLDIEQVAT
                     GEHWYGQQAVEKGLVDEINTSDEVILSLMEGREVVNVRYMQRKRLIDRFTGSAAESAD
                     RLLLRWWQRGQKPLM"
     gene            4582..5340
                     /locus_tag="JNZ57_001994"
     CDS             4582..5340
                     /locus_tag="JNZ57_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciK family oxidoreductase"
                     /protein_id="HAY8828222.1"
                     /translation="MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGR
                     NEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGL
                     LGDICPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRA
                     NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPA
                     DIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGISQ"
     gene            5337..5928
                     /gene="cobO"
                     /locus_tag="JNZ57_001995"
                     /pseudo
     CDS             5337..5928
                     /gene="cobO"
                     /locus_tag="JNZ57_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415786.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
     gene            complement(5968..6840)
                     /gene="rluB"
                     /locus_tag="JNZ57_001996"
     CDS             complement(5968..6840)
                     /gene="rluB"
                     /locus_tag="JNZ57_001996"
                     /EC_number="5.4.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2605) synthase RluB"
                     /protein_id="HAY8828223.1"
                     /translation="MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEV
                     TPGLKIRIDGHLISVRESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGAR
                     WIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGV
                     QLEDGPAAFKIIKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDI
                     PLPKGLPRGGWTELDLAQTNYLRELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHS
                     QVSGGRRSGGRNNG"
     gene            complement(7051..8946)
                     /locus_tag="JNZ57_001997"
     CDS             complement(7051..8946)
                     /locus_tag="JNZ57_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2207 domain-containing protein"
                     /protein_id="HAY8828224.1"
                     /translation="MAGKFRCILLLIAGLFVSSLSYAENPEIPSYEEGISLFDVEATL
                     QPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEP
                     WHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPF
                     EIYKTRFSLKFPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVL
                     YRWPHALLSNAPAPQTTNIFSHLLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVD
                     VIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHLEDQYDKNQQILICV
                     NEGATRNNEVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSLF
                     YRPDTFLQWGGLAILAIILYGNLSPVGWAGMSLVGDMFIMICWIIPFLFCSLELLFAR
                     DDDKPCVNRAIITLFLPLICSGVAFYSLYINVGDVFFYWYMPAGYFSAVCLTGYLTGM
                     GYIFLPKFTQTGQQRYARGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGWAISAN
                     LGREWALRIAPSLSSAIRAPEIARNGVLFSLQTHLSCGANTSLLGRSYSGGGAGGGAG
                     GGGGGGW"
     gene            complement(8974..9594)
                     /locus_tag="JNZ57_001998"
     CDS             complement(8974..9594)
                     /locus_tag="JNZ57_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HAY8828225.1"
                     /translation="MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKI
                     EDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSFVDNVAFRLMKNNTPGNYTFILK
                     GTKEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEI
                     KDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL"
     gene            complement(9591..10472)
                     /gene="yciV"
                     /locus_tag="JNZ57_001999"
     CDS             complement(9591..10472)
                     /gene="yciV"
                     /locus_tag="JNZ57_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exoribonuclease"
                     /protein_id="HAY8828226.1"
                     /translation="MSDTNYAVIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITD
                     HDTTAAIAPAREEISRSGLALNLIPGVEISTVWENHEIHIVGLNIDITHPLMCEFLAQ
                     QTERRNQRAQQIAERLEKAQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADV
                     FKKYLARGKTGYVSPQWCTIEQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAE
                     HHGDAMEVAQCQQSPNERTQLTTLARQHHLWASQGSDFHQPCPWIELGRKLWLPAGVE
                     GVWQLWEQPQNTTEREL"
     gene            10610..10654
                     /gene="trpL"
                     /locus_tag="JNZ57_002000"
     CDS             10610..10654
                     /gene="trpL"
                     /locus_tag="JNZ57_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon leader peptide"
                     /protein_id="HAY8828227.1"
                     /translation="MKAIFVLKAWWRTS"
     gene            10746..12308
                     /gene="trpE"
                     /locus_tag="JNZ57_002001"
     CDS             10746..12308
                     /gene="trpE"
                     /locus_tag="JNZ57_002001"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HAY8828228.1"
                     /translation="MQTQKPTLELLTCEGAYRDNPTALFHQLCGDRPATLLLESADID
                     SKDDLKSLLLVDSALRITALGDTVTIQALSGNGEALLTLLDNALPAGVENEQSPNCRV
                     LRFPPVSPLLDEDARLCSLSVFDAFRLLQNLLNVPKEEREAMFFGGLFSYDLVAGFED
                     LPQLSAENNCPDFCFYLAETLMVIDHQKKNTRIQASLFAPNEEEKQRLTARLNDLRQQ
                     LTEAAPPLPVVSVPHMRCECNQSDEEFGGVVRLLQKAIRTGEIFQVVPSRRFSLPCPS
                     PLAAYYVLKKSNPSPYMFFMQDNDFTLFGASPESSLKYDATSRQIEIYPIAGTRPRGR
                     RADGSLDRDLDSRIELEMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDR
                     YSYVMHLVSRVVGELRHDLDALHAYRACMNMGTLSGAPKVRAMQLIAEAEGRRRGSYG
                     GAVGYFTAHGDLDTCIVIRSALVENGIATVQAGAGIVLDSVPQSEADETRNKARAVLR
                     AIATAHHAQETF"
     gene            12308..13903
                     /gene="trpD"
                     /locus_tag="JNZ57_002002"
     CDS             12308..13903
                     /gene="trpD"
                     /locus_tag="JNZ57_002002"
                     /EC_number="2.4.2.18"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008784940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional anthranilate synthase glutamate
                     amidotransferase component TrpG/anthranilate
                     phosphoribosyltransferase TrpD"
                     /protein_id="HAY8828229.1"
                     /translation="MADILLLDNIDSFTYNLADQLRSNGHNVVIYRNHIPAQTLIERL
                     ATMSNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAG
                     EILHGKASSIEHDGQAMFAGLTNPLPVARYHSLVGSNIPAGLTINAHFNGMVMAVRHD
                     ADRVCGFQFHPESILTTQGARLLEQTLAWAQRKLEPTNTLQPILEKLYQAQTLSQQES
                     HQLFSAVVRGELKPEQLAAALVSMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADI
                     VGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNAD
                     KSRQALDELGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGV
                     YSPELVLPIAETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGEIKSYQLTAEDF
                     GLTPYHQEQLAGGTPEENRDILTRLLQGKGDAAHEAAVAANVAMLMRLHGHEDLQANA
                     QTVLEVLRSGSAYDRVTALAARG"
     gene            13907..15265
                     /gene="trpCF"
                     /locus_tag="JNZ57_002003"
     CDS             13907..15265
                     /gene="trpCF"
                     /locus_tag="JNZ57_002003"
                     /EC_number="4.1.1.48"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309861.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional indole-3-glycerol-phosphate
                     synthase TrpC/phosphoribosylanthranilate isomerase TrpF"
                     /protein_id="HAY8828230.1"
                     /translation="MQTVLAKIVADKAIWVETRKQQQPLASFQNEVQPSTRHFYDALQ
                     GARTAFILECKKASPSKGVIRDDFDPARIAAIYKHYASAISVLTDEKYFQGSFDFLPI
                     VSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGG
                     LTEVSNEEELERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGIN
                     TYAQVRELSHFANGFLIGSALMAHDDLHAAVRRVLLGENKVCGLTRGQDAKAAYDAGA
                     IYGGLIFVATSPRCVNVEQAQEVMAAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQLH
                     GNEDQLYIDTLREALPAHVAIWKALSVGETLPAREFQHVDKYVLDNGQGGSGQRFDWS
                     LLNGQSLGNVLLAGGLGADNCVEAAQTGCAGLDFNSAVESQPGIKDARLLASVFQTLR
                     AY"
     gene            15277..16470
                     /gene="trpB"
                     /locus_tag="JNZ57_002004"
     CDS             15277..16470
                     /gene="trpB"
                     /locus_tag="JNZ57_002004"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016158396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HAY8828231.1"
                     /translation="MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPEFQAQ
                     FNDLLKNYAGRPTALTKCQNITAGTNTTLYLKREDLLHGGAHKTNQVLGQALLAKRMG
                     KTEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVH
                     SGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVCEFQRMIGEETKAQILE
                     REGRLPDAVIACVGGGSNAIGMFADFINETNVGLIGVEPGGHGIETGEHGAPLKHGRV
                     GIYFGMKAPMMQTEDGQIEESYSISAGLDFPSVGPQHAYLNSTGRADYVSITDDEALE
                     AFKTLCLHEGIIPALESSHALAHALKMMRETPEKEQLLVVNLSGRGDKDIFTVHDILK
                     ARGEI"
     gene            16470..17276
                     /gene="trpA"
                     /locus_tag="JNZ57_002005"
     CDS             16470..17276
                     /gene="trpA"
                     /locus_tag="JNZ57_002005"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HAY8828232.1"
                     /translation="MERYESLFAQLKERKEGAFVPFVTLGDPGIEQSLKIIDTLIEAG
                     ADALELGIPFSDPLADGPTIQNATLRAFAAGVTPAQCFEMLALIRQKHPTIPIGLLMY
                     ANLVFNKGIDEFYAQCEKVGVDSVLVADVPVEESAPFRQAALRHNVAPIFICPPNADD
                     DLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPD
                     QVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKAATSS"
BASE COUNT         4225 a         4674 c         4347 g         4252 t
ORIGIN      
        1 tcattacccg cgaccctttg tttataaaaa cctgacagaa ttaaaggtta tttttttcct
       61 tcaacccatt tgccatcaac ataaaatgct gaccagccag tcgcctttcc gtctttttcc
      121 gaagagacat attgctgttt ggttttacgg ctaaagcgaa ccatggtctt attaccttcc
      181 ggatcctgct gtggcgcatc ggccagataa cgcagttttt ccggcagacg gtcgcggaag
      241 cgataaagct cttccaccag tggcgcacgc gtttcacgcg atttcgggaa agtgttggca
      301 gccaggaaaa cacccgcagc gccgtcacgc agcacgaaat aagcatctga tttttcgcac
      361 ggcagctcag gtaatggcac cggatcttct ttcggtggtg ccacttcgcc gttacgtaaa
      421 atcttacgtg tgtttttaca ctcttcgttg gtgcaggcca tgtatttacc gaaacgcccc
      481 attttcaggt gcatttcaga gccacatttt tcacactcaa cgatcgggcc gtcataacct
      541 ttaatgcgga attcgccctc ttcgatctcg taaccgtcgc aggttgggtt attaccacag
      601 acatgcaact tacgtttcgg atcgatgaga tagctgtcca tcgccgtgcc gcatttcggg
      661 caacgacgtt ttgcgcgcag cgcgttggtt tcagcgtctt cgccttccag tacgttcagc
      721 acttcgtttt ccggcaccag gttaatggtg gttttgcaac gctctttcgg cggcagcgca
      781 taaccagaac agccaaggaa taccccggtg ctcgctgtgc gaatccccat tttgcgacca
      841 caagtcgggc agtcaatgct ggtcagaacc atctggttcg ggcgcatacc accctcttcc
      901 ggatcttttt cagctttatc taactgctgg gtgaaatccg agaagaagtg atccagtaca
      961 gctttccact ctgcttcgtg atttgccacc tggtcgaggc tgttttccat ctgtgcggtg
     1021 aagtcgtagt tcattaactc gcggaaattt tcttcaaggc gatcggtgac gatttcgccc
     1081 attttttccg catagaaacg acgattttct actcgcacgt agccacgatc ctgaatggtc
     1141 gaaatgatcg acgcataggt agacggacga ccgataccgc gtttttccag ctctttaacc
     1201 agcgatgctt cactgaaacg ggctggcggc ttggtaaagt gctgggctgg tgtaagttca
     1261 acgagcgtca gagcatcgcc tttattaact gctggtaaga tgcgatcttc atcgccttta
     1321 cgcaacgcag gcatcacttt tgtccagcca tcaaaacgca aaatacgacc gcgtgctttc
     1381 aggcggaaat cgcccgcacc aacggtcagc gtcgtggagt catatttcgc tggggtcatc
     1441 tggcaggcta cgaactgacg ccagattaac tggtacagtt tctgcgcatc tgcttccata
     1501 tccttcagcg attccgccat cacattgacg tcagaaggac gaatcgcttc gtgcgcttcc
     1561 tgtgagtttt ctttgctggc gtactgattc ggactttccg gcagatattt cttaccaaaa
     1621 ttatcgctga tataaccgcg aaccatattt accgcgtcct gactcaggtt agtggagtcg
     1681 gtacgcatgt aagtgatata gcctgcttca tacaaacgct gcgccatcat catggttttt
     1741 ttcacgccaa atccaagacg ggtgctggca gcttgttgca gcgtagaggt aataaaagga
     1801 gcgccaggtt tagtggttgt cggtttgtct tcacgttcca gcacgctgta gcgcgctttt
     1861 tccagcagac ttaccgcagc ctgagtttgt tctttgttga ccggacggaa cggtttgtcg
     1921 ttctgatgag tcacctgtaa cgccaacgct tcaccagatg gcgtggtcgt gctggcatcg
     1981 acttcccaga actcttccgg cacgaacgct ttaatttcac gctcacgctc gaccaccagg
     2041 cgaaccgcca ccgactgcac acgaccggca gacagaccac gagcgatctt tttccatagc
     2101 agcggcgaaa ccatataccc caccacgcgg tccataaagc gacgcgcctg ctgggcatta
     2161 acacgatcaa tattcagctc acccggtttg ttaaatgcct ggcggatcgc gtttttagta
     2221 atttcgttaa acaccactcg gctatagcgc gcatcatcac ccccaatcac ttcccgcagg
     2281 tgccatgcaa tggcttcccc ttcgcggtca aggtcggttg cgagatagat gtggtcggct
     2341 ttttcagcca gttgtttcag ttcagagacg accttctctt taccaggcaa cacttcatag
     2401 tgcgcctccc aattgtgcca cgggtcaacc cccatacggt tgacgagagc gccacgttca
     2461 tcctttttag gctttttagc cgtcttggtg gaggtagagt cggcactctt tttggcagct
     2521 gagccactgg tcggcaaatc gcggatgtga ccgacgctgg atttcaccac gtagtcacta
     2581 cccagatact tgttgatcgt tttggctttt gccggggact caacgatgac aagagcttta
     2641 cccatattca ccttacctaa tttgattctt ccaggaatgc gtcgcacgtt gataaacctt
     2701 ccactggcaa cgagttaccg atatggactc gttctctgcg gatatcaacc ccttgtcgtg
     2761 actctgttca cgaaaattca ggtgactgag ttaacaggtc ttggcctaca ggcgctatag
     2821 cacgacggaa ttttggtcga atgtcaagca aatctattgc cagattgacg aaagtcgtca
     2881 cactgtacct gataaaatcc gatacgcaac tttattagca tgcaaaatcc aaagttgcca
     2941 gtaaggcgct cttgccacca gcgtggtata tttgtctgca agccatgcct ggcgtagact
     3001 aatgtccttg tttaaggagt aaataatgaa caaagagaca caacccatcg accgcgaaac
     3061 gctgttgaaa gaggccaaca aaatcattcg tgagcatgag gatacgctcg cagggattga
     3121 agccaccggc gtcacgcagc gtaatggcgt gctggtattt accggcgact actttttaga
     3181 tgaacaagga ttgccaacag ccaaaagcac cgcggtgttt aatatgttca aacacctggc
     3241 ccatgtgctt tcagaaaaat atcatctggt tgattaaagc aaaacgcgag gtcttagcct
     3301 cgcgtttgtc ttttacatca atggcttttg accccgctgc caccagcgta gcaacaatcg
     3361 atcggcgctc tctgccgcgc tgccggtgaa tcggtcaatg agtcgtttac gctgcatata
     3421 gcgtacatta accacttcac ggccttccat caggctaaga ataacttcat cactggtgtt
     3481 gatttcatca accaggcctt tctctaccgc ctgttgtccg taccagtgtt cacctgttgc
     3541 cacctgttca atatccagag acggacgcat acgcttcaca aaatctttaa acaactgatg
     3601 cgtttcgttc aactcttcgc ggaatttctc ccgcccttct tcggtatttt cacccagcaa
     3661 cgtcagagta cgcttatact gcccggcagt gtgcagttcg atatcaatat atttgctttt
     3721 caggaagcgg ttaaagttgg gcatttgcgc caccacccca atggaaccca caatagcaaa
     3781 cggtgcggaa acaattttgt ccgccacaca ggccatcatg taaccgccgc tggcagcgac
     3841 tttgtctacc gtaacagtta aaggaatgtt tttatcacgc agacgctgca gctgcgaagc
     3901 cgccaacccg taaccatgca ccatgccacc agggctttcc agacggagca caacctgatc
     3961 ctgcggtttg aatgctgcga gtaccgccgt tatctcttca cgtagcgagt tcacttcatg
     4021 ggcgtccatg ctgcctttaa aatccagcac ccagacgcga ggtttactgt cagttgccac
     4081 ctcgcccagt ttggctttcg cttttgctgc tttcgcttct tgcttgtgct ttttcttctg
     4141 cgctttgtgc cactgttttt gctgatgtga gcccatcagc gccgcggcca gttcttcttt
     4201 catctcctta tactgttcgc tgagattgtt gacccgtaac tcgccacgct ggcgtttatt
     4261 acgttgagca acattgacaa taatggcggc aatcgccgca atcgctagca caacggtaac
     4321 gattttcgcc aaaaacaaac catattcaga caacaattcc acgagtcccc accttggtta
     4381 aacaacgctt tggctcacag tttacaacag gcatgttaag ccgtctcgca gagatgttat
     4441 tgcagcgaaa gtatgacaaa gtatccattt tgcggtgtta tcgccccagg ctgattgaaa
     4501 tgcccttctg tttcaggcat aaagccccaa agtcataaag tacactggca gcgcgacaga
     4561 caacgtcgtt gaggagtagc catgcattac cagccaaaac aagatttact caatgatcgc
     4621 attatcctgg tgacgggagc cagcgatggg attggtcgtg aagccgcgat gacgtatgca
     4681 cgctatggtg cgacagtgat tctgttgggc cgtaatgaag aaaaattacg tcaggtagcc
     4741 agccacataa acgaagaaac tgggcgtcag ccacagtggt ttattctcga tttgctgacc
     4801 tgcacgtccg aaaattgcca acaactggca cagcgcattg tcgttaatta tccgcgtctg
     4861 gatggtgttt tgcataatgc cggattgctc ggcgatattt gcccaatgag cgaacaaaat
     4921 ccgcaggtct ggcaggacgt catgcaggtc aacgttaatg ccacctttat gctcacccag
     4981 gcactgcttc ctttattact caaatcggac gccggttcac tggtctttac ttcatcaagc
     5041 gttggacgtc agggacgagc taactggggt gcatatgcag cgtcgaaatt tgccaccgaa
     5101 gggatgatgc aggtactggc cgatgaatat cagcagcgcc tgcgcgtcaa ctgcattaac
     5161 ccaggcggta cgcgcaccgc aatgcgcgca agcgccttcc cgaccgaaga tccacagaaa
     5221 cttaaaacac ccgctgatat catgccgctc tacctctggc tgatgggcga tgacagccgc
     5281 cgtaaaaccg gcatgacctt tgacgcccaa ccgggccgta aaccaggaat ttcccaatga
     5341 gtgatgaacg ctaccaacag cgtcagcagc gagtgaaaga aaaagtagat gctcgtgtgg
     5401 cccaggcccc aggatgaacg cggtattatc atcgtcttta ccggcaatgg aaaaggcaaa
     5461 accaccgcgg catttggtac ggcaacacgc gcagttggtc acggaaaaaa agtgggcgtc
     5521 gtgcagttta ttaaaggcac ctggcctaat ggcgaacgca atctgctgga accacatggc
     5581 gttgagtttc aggtgatggc aacgggcttt acctgggata cacaaaaccg cgagtctgat
     5641 accgccgcct gccgcgaagt ctggcaacat gcaaagcgga tgcttgctga ttcctcactg
     5701 gatatggttt tgcttgatga actgacgtat atggtggcgt atgactattt gccactggaa
     5761 gaagtggtgc aggcgttaaa tgaacgtcca catcaacaga cggtgattat cacgggtcga
     5821 ggctgtcatc gggatattct tgaactagcg gatacggtaa gtgagctgcg ccccatcaaa
     5881 catgcgtttg atgccggtgt taaggcgcaa atagggattg attattaatc tgtaaaaatg
     5941 ccggatatga cgtccggcat actttgatta accgttatta cgcccgccag aacgacgacc
     6001 gccgctcacc tgactgtgac gtttcaccgc acgacgaatc tgattagcct tcatgcgacg
     6061 acggtctttt tctacagcga ctttagagct ggtttctggc ggaagctcca ccagttcgcg
     6121 cagatagtta gtctgggcga ggtccagctc cgtccagcca ccgcgtggca gaccttttgg
     6181 cagtgggata tcaccgtaac gaacacggat caggcggctc acctgcacac caaccgcttc
     6241 ccacagacga cgaacttcac ggttacggcc ttcggtcaga gtcacgttgt accactggtt
     6301 gatcccttcg ccgccgctga acttgatgat tttaaaagct gccggaccat cttccagttg
     6361 cacgccacga ctcaaatcac gcagtttcgc gtcgtcaacc tgaccaaata cacgcacggc
     6421 gtattcacgt tcaacttcac ggcttggatg cattaaacgg tttgccagtt caccatcggt
     6481 ggtgaacagc agcagaccac aggtgttaac gtccagacga cctacggcaa tccagcgtgc
     6541 gccacgcagc tttggcagac ggtcaaacac cgtcggacgc ccttccggat cgttacgggt
     6601 acacaactca ccttccggtt tgtaataggc cagaacgcga caaatttgtt cagcggactc
     6661 acgtaccgaa atcagatgac catcgatacg aattttcagc ccaggggtaa cttcaacgcg
     6721 atcgccgagt ttagcaattt tgccatcaac actcacacga ccggcttcaa taatagattc
     6781 gatttcacgg cgggagccgt ggccagcgcg ggccagcact ttctgtaatt tttcgctcat
     6841 agagcttcct tttggtgtcg ccttcccagg cgtctgatat gcttttgtgc aacagtgagt
     6901 cagaacttac atctgactca ctgatagtaa agtctgtttg aactcttcag gccttaagta
     6961 aacgactcga cgtttatcgg cctggctttg aggcgcaaca tactacacta tctttatggt
     7021 taaagcttgt ttcgattaac atcagcttaa ttaccagcca ccaccgcctc cgccacccgc
     7081 gccgccgcca gcaccaccac cggaataact tcgccccaac aaactggtat tggccccgca
     7141 acttaggtgc gtctgtaatg agaataaaac gccgttacgg gcaatctctg gagcgcgaat
     7201 cgccgaagaa agcgaagggg caatgcgtaa cgcccattcc ctccccaaat ttgccgatat
     7261 agcccaacct agcaacgcgt aatccagttt ccgtgtttcc cctttccgcc gacgtccact
     7321 gtgtgttgct gcctctttac gcgcaagata gttaacgata gcttcaccgc gggcataacg
     7381 ttgctgccca gtttgggtaa actttggcag aaaaatatac cccatgccag tgagataacc
     7441 ggtcaggcaa acagcgctaa aataacccgc tggcatatac cagtaaaaga atacatctcc
     7501 gacattgata tagagagaat agaaggccac gcctgaacaa atcagtggta aaaacaaagt
     7561 gatgattgca cgattaacgc aaggcttgtc atcatcgcgg gcaaacaaaa gctcaaggga
     7621 acaaaataaa aaaggaataa tccagcagat cataataaac atatcgccta ccagactcat
     7681 tcctgcccaa cctacgggac tcaggttacc gtagagaatg atcgccaata ttgccagtcc
     7741 accccattgc aaaaacgtat caggccggta aaacaaagac tttttacgcg gcagataaaa
     7801 tttctgcatc cgtaaaaatg ccctgcgtaa gactctgttg cgtctccccg taagaacgac
     7861 cttatcgcct ttacgaaata acgcttccag taataactgc tctgcgggca gtaatacctc
     7921 attatttctg gtcgcgcctt cattaacaca aatcaggatt tgctggttct tatcatactg
     7981 atcttccaga tgaatttttc ccttcacgat cagatttacg atatcggcac agaaaccttt
     8041 atcgtcgtaa accagcttcg catcgagacg taacatgccg ggcgtgtaat ctggcggaat
     8101 gacatcggtt tcaatcacat ctaccggcgt aaattgcggc ctgcgcttcc agagatataa
     8161 ccatccacaa accaggaata gacacggaaa ccaaattaac aacgatgacg tggagggtaa
     8221 aagaagatgg ctgaaaatat tcgtcgtttg tggagccggg gcattgctaa gtaacgcgtg
     8281 aggccagcgg tagagtaccg tgaaatcttc tcgataaaac ggatcgcggg attcaattct
     8341 tccgtcctca aggatgcggc catttcgata tgtgtcgccc tcttctccag taaagagatc
     8401 gatttcgcta aatggattac ccgcgatatc agggaacttg agtgaaaatc gggtcttata
     8461 gatttcaaac ggccagtggt taccagtcac gttccagatt aacagatctg aatctccctc
     8521 acgcaggaaa gcatttttaa cctgataatg aatttgataa tgatagtcgc cttgaggcaa
     8581 gaaacgttgt ttatcgccca cgacaatact cattaacccg atatgccagt caagatgcca
     8641 gggttcagga ataccatcac gagtgacgcc aacaatatga tagttcagca gtgcagcgtc
     8701 cccatcaggc tgcatccaga gtcgtggtaa atcacgataa aatccgtgct taatctgctg
     8761 atttcgcgcc tgaaaatgaa tattttcttt gatgtcgagc accccatccg gttgcagagt
     8821 ggcttcaaca tcaaagagcg agatcccttc ttcataagaa gggatctccg ggttttctgc
     8881 ataacttaga gatgatacaa acagccctgc tatcaacagc aaaatgcagc gaaacttccc
     8941 tgccatagtc ttccatccgt ggaacgcaat ttgttataag aaaggcttca catcacccac
     9001 gccttcacgc accacgaccg gcgtatcatc ggtaagatca atgaccgttg tcggtttctg
     9061 tccgagatag ccgccgtgga taatcaaatc cacctgtttt tccagacggt ctttaatttc
     9121 ttctggatcg gattcggtaa attcgctgcc tggcagcatt agcgaagtgg aaagcatcgg
     9181 ttcgcccagt gcttcaagca acgcctgcgc aatcgggtta gaaggcacac gcataccgat
     9241 ggttttgcgt ttttcctgca acagacggcg tggcacctcc ttcgtcccct tcaggatgaa
     9301 ggtatagttg cccggcgtgt tgtttttcat taaacgaaac gcaacgttat ccacgaatga
     9361 ataggtcgaa agttcagaaa gatcgcgaca catcagggta aagttgtgac cgtccggcag
     9421 ctggcgaata cgacaaatac gctccatcgc gtttttatct tcaattttac agccgagcgc
     9481 atagccggaa tcagttggat aaacaatcac cccgccttta cgcacgatct ccaccgcctg
     9541 gttgatcaga cgttgctgcg ggttatcagg atgaatataa aaaaactggc tcataattcc
     9601 ctctctgtgg tgttctgcgg ctgttcccat agctgccaga cgccttcaac gcctgcgggc
     9661 agccagagtt tacgacccag ttcgatccac gggcatggct gatgaaaatc agatccttgt
     9721 gatgcccata aatgatgctg acgcgcaagt gtcgtcaact gggtgcgttc attgggcgat
     9781 tgctggcact gcgcgacttc catcgcgtcg ccgtggtgtt cggcaaaatg cgcaaccaat
     9841 cttttcagcc atttagcact aagattgtac cgcccaggat gagctagcac cgccttaccg
     9901 ccagaatgat gaatgacatc aatagcttgt tctattgtac accactgtgg cgaaacgtat
     9961 ccggttttcc cgcgcgccag atacttttta aagacatctg ccattgaact ggctttgccg
    10021 cactcaacaa ggaaacgcgc aaaatgaccg cgcgtcactg cgccgccctg cgccagtcgt
    10081 tgtgcgcctt ccagcgcccc aggtatttgc gctttttcaa gtctttcggc aatttgctgc
    10141 gcccgctgat tgcgccgttc tgtctgctgc gcgaggaact cacacattag cggatgagta
    10201 atatcaatat tcagcccgac aatatgaatt tcatgatttt cccagaccgt ggaaatttcc
    10261 acgccgggaa taagattcag cgccagtccc gaacgtgaaa tttcctctct tgctggcgcg
    10321 attgcagctg tggtgtcatg gtcggtgatc gccagggtgc cgacgcgcat ctcgactgca
    10381 cggtgcacca atgcttctgg cgtcaggcag ccatcggaag ctgtggtatg gctgtgcagg
    10441 tcgtaaatca ctgcgtaatt cgtgtcgctc aaggcgcact cccgttctgg ataatgtttt
    10501 ttgcgccgac atcataacgg ttctggcaaa tattctgaaa tcagctgttg acaattaatc
    10561 atcgaactag ttaactagta cgcaagttca cgtaaaaagg gtatcgacaa tgaaagcaat
    10621 tttcgtactg aaagcttggt ggcgcacttc ctgaaacggg cagtgtattc accatgcgta
    10681 aagcaatcag atacccagcc cgcctaatga gcgggctttt ttttgaacaa aattagagaa
    10741 taacaatgca aacacaaaaa ccgactctcg aactgctaac ctgcgaaggc gcttatcgcg
    10801 acaacccgac tgcgcttttt caccagttgt gtggggatcg tccggcaacg ctgctgctgg
    10861 aatccgcaga tatcgacagc aaagatgatt taaaaagcct gctactggta gacagtgcgc
    10921 tgcgcattac agcattaggt gacactgtca caattcaggc actttccggc aacggcgaag
    10981 ccctgctgac actactggat aacgccctgc ctgcgggtgt ggaaaatgaa caatcaccaa
    11041 actgccgtgt gctgcgcttc ccccctgtca gtccactgct ggatgaagac gctcgcttat
    11101 gctccctttc ggtttttgac gctttccgtt tattgcagaa tctgttgaat gtaccgaagg
    11161 aagaacgaga agcaatgttc ttcggcggcc tgttctctta tgaccttgtg gcgggatttg
    11221 aagatttacc gcaactgtca gcggaaaata actgccctga tttctgtttt tatctcgctg
    11281 aaacgctgat ggtgattgac catcagaaaa aaaacacccg cattcaggcc agcctgtttg
    11341 ctccgaatga agaagaaaaa caacgtctca ctgctcgcct gaacgatctt cgccagcagc
    11401 tgaccgaagc cgcgccgccg ctgccggtgg tttccgtgcc gcatatgcgt tgtgaatgta
    11461 accagagcga tgaagagttc ggtggcgtgg tgcgtttgtt gcaaaaagcg attcgcaccg
    11521 gagaaatttt ccaggtggtg ccgtctcgcc gtttctctct gccctgcccg tcaccgctgg
    11581 cggcctatta cgtgctgaaa aagagtaatc ccagcccgta catgtttttt atgcaggata
    11641 atgatttcac cctgtttggc gcgtcgccgg aaagttcgct caagtatgac gccaccagcc
    11701 gccagattga gatctacccg attgccggaa cacgcccgcg cggtcgtcgc gccgatggtt
    11761 cactggacag agacctcgac agccgcatcg aactggaaat gcgtaccgat cataaagagc
    11821 tttctgaaca tctgatgctg gtggatctcg cccgtaatga tctggcacgc atttgcaccc
    11881 ccggcagccg ctacgtcgcc gatcttacca aagttgaccg ttactcttac gtgatgcacc
    11941 tggtctcccg cgtggtcggt gagctgcgcc acgatctcga cgccctgcac gcttaccgcg
    12001 cctgtatgaa tatggggacg ttaagcggtg cgccgaaagt acgcgccatg cagttaattg
    12061 ccgaggcgga aggtcgtcgc cgcggcagct acggcggcgc ggtaggttat ttcaccgcgc
    12121 atggcgatct cgacacctgc attgtgatcc gctcagcgct ggtggaaaac ggtatcgcca
    12181 ccgtgcaagc cggtgctggc atagtccttg attctgttcc gcagtcggaa gccgacgaaa
    12241 cccgtaataa agcccgcgct gtactgcgcg ctattgccac cgcgcatcat gcacaggaaa
    12301 ctttctgatg gctgacattc tgctgctcga taatatcgac tcttttacgt acaacctggc
    12361 agatcagttg cgcagcaatg ggcataatgt ggtgatttac cgcaaccata ttccggcgca
    12421 gaccttaatt gaacgcctgg cgacgatgag caatccggtg ctgatgcttt ctcctggccc
    12481 cggtgtgccg agcgaagccg gttgtatgcc ggaactcctc acccgcttgc gtggcaagct
    12541 gcccattatt ggcatttgcc tcggacatca ggcgattgtc gaagcttacg ggggctatgt
    12601 cggtcaggcg ggcgaaattc tccacggtaa agcctccagc attgaacacg acggtcaggc
    12661 gatgtttgcc ggattaacaa acccgctacc agtggcgcgt tatcactcgc tggttggcag
    12721 taacattccg gccggtttaa ccatcaacgc ccattttaat ggcatggtga tggcagtacg
    12781 tcacgatgcg gatcgcgttt gtggattcca gttccatccg gaatccattc ttactaccca
    12841 gggcgctcgc ctgctggaac aaacgctggc ctgggcgcag cggaaactag agccaaccaa
    12901 cacgctgcaa ccgattctgg aaaaactgta tcaggcgcag acgcttagcc agcaagaaag
    12961 ccaccagctg ttttcagcag tggtacgtgg cgaactgaaa ccggaacaac tggcggcggc
    13021 gctggtgagc atgaaaattc gcggcgagca cccgaacgag atcgccggag cagcaaccgc
    13081 gttactggaa aacgccgcgc cgttcccgcg cccggattat ctgtttgccg atatcgtcgg
    13141 caccggtggt gacggcagta acagcatcaa tatttccacc gccagtgcgt ttgtcgccgc
    13201 ggcctgtggg ctgaaagtgg cgaaacacgg caaccgtagc gtctccagta aatctggttc
    13261 gtccgatctg ctggcggcgt tcggtattaa tcttgatatg aatgccgata aatcgcgcca
    13321 agcgctggat gagttaggcg tatgtttcct ctttgcgccg aaatatcaca ccggatttcg
    13381 ccatgcgatg ccggttcgcc agcaactgaa aacccgcact ctgttcaacg tgctgggacc
    13441 attgattaac ccggcgcatc cgccgctggc gttaattggt gtttatagtc cggaactggt
    13501 gctgccgatt gccgaaacct tgcgcgtgct ggggtatcaa cgcgcggcgg tagtgcacag
    13561 cggcggtatg gatgaagttt cattacacgc gccgacaatc gttgccgaac tgcatgacgg
    13621 tgaaattaag agctatcagc taactgcaga agattttggc ctgacaccct accaccagga
    13681 gcaactggca ggcggaacac cggaagaaaa ccgtgacatt ttaacacgct tgttacaagg
    13741 taaaggcgac gccgctcacg aagcagccgt cgcggcgaat gtcgccatgt taatgcgcct
    13801 gcatggccat gaagatctgc aagccaatgc gcaaaccgtt cttgaggtac tgcgcagtgg
    13861 ttccgcttac gacagagtta ccgcactggc ggcacgaggg taaatgatgc aaaccgtttt
    13921 agcgaaaatc gtcgcagaca aggcgatttg ggtagaaacc cgcaaacagc agcaaccgct
    13981 ggccagtttt cagaatgagg ttcagccgag cacgcgacat ttttatgatg cgctacaggg
    14041 tgcacgcacg gcgtttattc tggagtgcaa gaaagcgtcg ccgtcaaaag gcgtgatccg
    14101 tgatgatttc gatccggcac gcattgccgc catttataaa cattacgctt cggcaatttc
    14161 ggtgctgact gatgagaaat attttcaggg gagctttgat ttcctcccca tcgtcagcca
    14221 aatcgccccg cagccgattt tatgtaaaga cttcattatc gacccttacc agatctatct
    14281 ggcgcgctat taccaggccg atgcctgctt attaatgctt tcagtactgg atgacgacca
    14341 atatcgccag cttgcagccg tcgctcacag tctggagatg ggggggctga ccgaagtcag
    14401 taatgaagag gaactggagc gcgccattgc attaggggca aaggtcgttg gcatcaacaa
    14461 ccgcgatctg cgtgatttgt cgattgatct caaccgtacc cgcgagcttg cgccgaaact
    14521 ggggcacaac gtaacggtaa tcagcgaatc cggcatcaat acttacgctc aggtgcgcga
    14581 gttaagccac ttcgctaacg gttttctgat tggttcggcg ttgatggccc atgacgattt
    14641 gcacgccgcc gtgcgccggg tgttgctggg tgagaataaa gtatgtggcc tgacgcgtgg
    14701 gcaagatgct aaagcagctt atgacgcggg cgcgatttac ggtgggttga tttttgtcgc
    14761 gacatcaccg cgttgcgtca acgttgaaca ggcgcaggaa gtgatggctg cggcaccgtt
    14821 gcagtatgtt ggcgtgttcc gcaatcacga tattgccgat gtggtggaca aagctaaggt
    14881 gttatcgctg gcggcagtgc aactgcatgg taatgaagat cagctgtata tcgatacgct
    14941 gcgtgaagct ctgccagcac atgttgccat ctggaaagca ttaagcgtcg gtgaaaccct
    15001 gcccgcccgc gagtttcagc acgttgataa atatgtttta gacaacggcc agggtggaag
    15061 cgggcaacgt tttgactggt cactattaaa tggtcaatcg cttggcaacg ttctgctggc
    15121 ggggggctta ggcgcagata actgcgtgga agcggcacaa accggctgcg ccggacttga
    15181 ttttaattct gctgtagagt cgcaaccggg catcaaagac gcacgtcttt tggcctcggt
    15241 tttccagacg ctgcgcgcat attaaggaaa ggaacaatga caacattact taacccctat
    15301 tttggtgagt ttggcggcat gtacgtgcca caaatcctga tgcctgctct gcgccagctg
    15361 gaagaagctt ttgtcagcgc gcaaaaagat cctgaatttc aggctcagtt caacgacctg
    15421 ctgaaaaact atgccgggcg tccaaccgcg ctgaccaaat gccagaacat tacggctggg
    15481 acgaacacca cgctgtatct gaagcgcgaa gatttgctgc acggcggcgc gcataaaact
    15541 aaccaggtgc tcggtcaggc tttactggcg aagcggatgg gtaaaaccga aatcatcgcc
    15601 gaaaccggtg ccggtcagca tggcgtggcg tcggcccttg ccagcgccct gctcggcctg
    15661 aaatgccgta tttatatggg tgccaaagac gttgaacgcc agtcgcctaa cgtttttcgt
    15721 atgcgcttaa tgggtgcgga agtgatcccg gtacatagcg gttccgcgac gctgaaagat
    15781 gcctgtaacg aggcgctgcg cgactggtcc ggcagttatg aaaccgcgca ctatatgctg
    15841 ggcaccgcag ctggcccaca tccttatccg accattgtgt gtgagtttca gcggatgatt
    15901 ggcgaagaaa cgaaagcgca gattctggaa agagaaggtc gcctgccgga tgccgttatc
    15961 gcctgtgttg gcggcggttc gaatgccatc ggcatgtttg cagatttcat caacgaaacc
    16021 aacgtcggcc tgattggtgt ggagccgggt ggtcacggta tcgaaactgg cgagcacggc
    16081 gcaccgctaa aacatggtcg cgtgggcatt tatttcggta tgaaagcgcc gatgatgcaa
    16141 accgaagacg ggcagattga agaatcttac tccatctccg ccggactgga tttcccgtct
    16201 gtcggcccac aacacgcgta tcttaacagc actggacgcg ctgattacgt gtctattacc
    16261 gatgatgaag cccttgaagc cttcaaaacg ctgtgcctgc acgaagggat tatcccggcg
    16321 ctggagtctt cccacgccct ggcccatgcg ctgaaaatga tgcgcgaaac cccggaaaaa
    16381 gagcagctac tggtggttaa cctttccggt cgcggcgata aagacatctt caccgttcac
    16441 gatattttga aagcacgagg ggaaatctga tggaacgcta cgaatctctg tttgcccagt
    16501 tgaaggagcg caaagaaggc gcattcgttc ctttcgtcac gctcggggat ccgggcattg
    16561 agcagtcatt gaaaattatc gatacgctaa ttgaagccgg tgctgacgcg ctggagttag
    16621 gtatcccctt ctccgaccca ctggcggatg gcccgaccat tcaaaacgcc actctgcgcg
    16681 cctttgcggc aggtgtgact ccggcacaat gttttgaaat gctggcactg attcgccaga
    16741 aacacccgac cattcccatt ggcctgttga tgtatgccaa tctggtgttt aacaaaggca
    16801 ttgatgagtt ttatgcccag tgcgagaaag tcggcgtcga ttcggtgctg gttgccgatg
    16861 tgccagttga agagtccgcg cccttccgcc aggccgcgtt gcgccataat gtcgcaccta
    16921 tcttcatctg cccgccaaat gccgatgacg acctgctgcg ccagatagcc tcttacggtc
    16981 gtggttacac ctatttgctg tcacgagcgg gcgtgaccgg cgcagaaaac cgcgccgcgt
    17041 tacccctcaa tcatctggtt gcgaagctga aagagtacaa cgctgcacct ccattgcagg
    17101 ggtttggtat ttccgccccg gatcaggtaa aagcagcgat tgatgcagga gctgcgggcg
    17161 cgatttctgg ttcggccatt gttaaaatca tcgagcaaca tattaatgag ccagagaaaa
    17221 tgctggcggc actgaaagtt tttgtacaac cgatgaaagc ggcgacgagc agttaatccc
    17281 acagtcgcca gttccgttgg cggcatttta actttcttta atgaagccgg aaaaatccta
    17341 aattcattta atatttatct ttttaccgct tcgcttaccc ctgtcgaacg tcaacttacg
    17401 tcatttttcc gtccaacagt aatataatca aacaaattaa tcccgcaaca taacaccagt
    17461 aaaatcaata attttctcta agtcacttat tcctcaga
//
LOCUS       DADMHC010000071        17475 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.071, whole genome shotgun sequence.
ACCESSION   DADMHC010000071 DADMHC010000000
VERSION     DADMHC010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17475)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17475)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17475
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.071"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(59..1333)
                     /gene="tyrS"
                     /locus_tag="JNZ57_002006"
     CDS             complement(59..1333)
                     /gene="tyrS"
                     /locus_tag="JNZ57_002006"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HAY8828233.1"
                     /translation="MASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTA
                     DSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVD
                     KIRKQVAPFLDFDCGENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQR
                     LNREDQGISFTEFSYNLLQGYDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQN
                     QVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFT
                     FMSIEEINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSA
                     LSEADFEQLAQDGVPMVEMEKGADLMQALVDSELQPSRGQARKTIASNAITINGEKQS
                     DPEYFFKEEDRLFGRFTLLRRGKKNYCLICWK"
     gene            complement(1462..2118)
                     /gene="pdxH"
                     /locus_tag="JNZ57_002007"
     CDS             complement(1462..2118)
                     /gene="pdxH"
                     /locus_tag="JNZ57_002007"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HAY8828234.1"
                     /translation="MSDNDELQQIAHLRREYTKGGLRRRDLPADPLTLFERWLSQACE
                     AKLADPTAMVVATVDEHAQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLL
                     FPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKF
                     LELKQKFQQGEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP
                     "
     gene            complement(2177..2506)
                     /gene="mliC"
                     /locus_tag="JNZ57_002008"
     CDS             complement(2177..2506)
                     /gene="mliC"
                     /locus_tag="JNZ57_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416156.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C-type lysozyme inhibitor"
                     /protein_id="HAY8828235.1"
                     /translation="MSMKKLLLICLPVLLTGCSAFNQLVEHMQTATLEYQCDEKPLTV
                     KLNNPRQEVSFVYDNQLLHLKQGISASGARYTDGIYVFWSKGDEATVYKRDRIVLNNC
                     QLQNPQR"
     gene            complement(2604..3713)
                     /gene="anmK"
                     /locus_tag="JNZ57_002009"
     CDS             complement(2604..3713)
                     /gene="anmK"
                     /locus_tag="JNZ57_002009"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HAY8828236.1"
                     /translation="MKSGRFIGVMSGTSLDGVDVVLATIDEHRVAQLASLSWPIPVSL
                     KQAVLDICQGQQLTLSQFGQLDTQLGRLFADAVNALLKEQNLQARDIVAIGCHGQTVW
                     HEPTGVAPHTLQIGDNNQIVARTGITVVGDFRRRDIALGGQGAPLVPAFHHALLAHPT
                     ERRMVLNIGGIANLSLLIPGQPVGGYDTGPGNMLMDAWIWRQAGKPYDKDAEWARAGK
                     VILPLLQNMLSDPYFSQPAPKSTGREYFNYGWLERHLRHFPGVDPRDVQATLAELTAV
                     TISEQVLLSGGCERLMVCGGGSRNPLLMARLAALLPGTEVTTTDAVGISGDDMEALAF
                     AWLAWRTLAGLPRNLPSVTGASQETVLGAIFPANP"
     gene            3987..4454
                     /gene="slyB"
                     /locus_tag="JNZ57_002010"
     CDS             3987..4454
                     /gene="slyB"
                     /locus_tag="JNZ57_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein SlyB"
                     /protein_id="HAY8828237.1"
                     /translation="MIKRVLVVSMVGLSLVGCVNNDTLSGDVYTASEAKQVQNVSYGT
                     IVNVRPVQIQGGDDSNVIGAIGGAVLGGFLGNTVGGGTGRSLATAAGAVAGGVAGQGV
                     QSAMNKTQGVELEIRKDDGNTIMVVQKQGNTRFSPGQRVVLASNGSQVTVSPR"
     gene            complement(4501..4935)
                     /gene="slyA"
                     /locus_tag="JNZ57_002011"
     CDS             complement(4501..4935)
                     /gene="slyA"
                     /locus_tag="JNZ57_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416159.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator SlyA"
                     /protein_id="HAY8828238.1"
                     /translation="MESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLP
                     PDQSQIQLAKAIGIEQPSLVRTLDQLEEKGLISRQTCASDRRAKRIKLTEKAEPLISE
                     MEAVINKTCAEILHGISAEELEQLITLIAKLEHNIIELQAKG"
     gene            5136..5309
                     /locus_tag="JNZ57_002012"
     CDS             5136..5309
                     /locus_tag="JNZ57_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000670993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1656 domain-containing protein"
                     /protein_id="HAY8828239.1"
                     /translation="MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLL
                     RGWIYAGDIWHPL"
     gene            5375..6232
                     /locus_tag="JNZ57_002013"
     CDS             5375..6232
                     /locus_tag="JNZ57_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310380.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HAY8828240.1"
                     /translation="MSIKTIKYFSTIIVAIVAVLAGWWLWNYYMQSPWTRDGKIRAEK
                     VSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKAN
                     NEANRRRHLSQNFISAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRAPVSG
                     WVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKT
                     LRGHVSSIGRAIYDQSVESDSSLIPDVKPNVPWVRLAQRVPVRFALDKVPGDVTLVSG
                     TTCSIAVGQ"
     gene            6232..8244
                     /locus_tag="JNZ57_002014"
     CDS             6232..8244
                     /locus_tag="JNZ57_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HAY8828241.1"
                     /translation="MNASSWSLRNLPWFKATLAQWRYALRNTIAMCLALTVAYYLNLD
                     EPYWAMTSAAVVSFPTVGGVISKSLGRIAGSLLGAIAALLLAGHTLNEPWFFLLSMSA
                     WLGFCTWACAHFTNNVAYAFQLAGYTAAIIAFPMVNITEASQLWDIAQARVCEVIVGI
                     LCGGMMMMILPSSSDATALLTALKNMHAQLLEHASLLWQPETNDAIRAAHEGGIGQIL
                     TMNLLRIQAFWSHYRFRQQNARLNALLHQQLRMTSVISSLRRMLLNWPSPPGATREIL
                     EQLLTALASSQTDAYTVARIIAPLRPTNVADYRHVAFWQRLRYFCRLYLQSSQELHRL
                     QSGVDDHARLARTSALARHTDNAEAMWSGLRTFCTLMMIGAWSIASQWDAGANALTLA
                     AISCVLYSAVAAPFKSLSLLMRTLVLLSLFSFVVKFGLMVQISDLWQFLLFLFPLLAT
                     MQLLKLQMPKFAALWGQLIVFMGSFIAVTNPPVYDFADFLNDNLAKIVGVALAWLAFA
                     ILRPGSDARKSRRHIRALRRDFVDQLSRHPTLSESEFESLTYHHVSQLSNSQDALARR
                     WLLRWGVVLLNCSHVVWQLRDWESSSDPLSRVRDNCISLLRGVMSERGVQQKSLAATL
                     EELQRICDSLARHHQPAARELAAIVWRLYCSLSQLEQAPPQGTQAS"
     gene            complement(8245..8766)
                     /gene="sodC"
                     /locus_tag="JNZ57_002015"
     CDS             complement(8245..8766)
                     /gene="sodC"
                     /locus_tag="JNZ57_002015"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Cu-Zn] SodC2"
                     /protein_id="HAY8828242.1"
                     /translation="MKRFSLAILALVVATGAQAASEKVEMNLVTSQGVGQSIGSVTIT
                     ETDKGLEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHE
                     GPEGAGHLGDLPALVVNNDGKATDAVITPRLKSLDEIKDKALMVHVGGDNMSDQPKPL
                     GGGGERYACGVIK"
     gene            complement(8847..9743)
                     /locus_tag="JNZ57_002016"
     CDS             complement(8847..9743)
                     /locus_tag="JNZ57_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase family oxidoreductase"
                     /protein_id="HAY8828243.1"
                     /translation="MVQRITIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDL
                     GVTTVDHADIYGGYQCEAAFGEALKLAPHLCERMEIVSKCGIATTAREENVIGHYITD
                     RDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNF
                     TPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLF
                     NDDYFQPLRDELAVVAEELNAGSIEQVVYAWVLRLPSQPLPIIGSGKIERVRAAVEAE
                     TLKMTRQQWFRIRKAALGYDVP"
     gene            complement(9792..10031)
                     /locus_tag="JNZ57_002017"
     CDS             complement(9792..10031)
                     /locus_tag="JNZ57_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1289 domain-containing protein"
                     /protein_id="HAY8828244.1"
                     /translation="MAEQLEFFPVQSPCRGICQSDERGFCRGCFRSRDERFNWNKMSD
                     GEKQEVLRLCRQRLMRKLRANKPASSDEPEQPSLF"
     gene            10134..10733
                     /locus_tag="JNZ57_002018"
     CDS             10134..10733
                     /locus_tag="JNZ57_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416166.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HAY8828245.1"
                     /translation="MNKHTEHDTREHLLATGEQLCLQRGFTGMGLSELLKTAEVPKGS
                     FYHYFRSKEAFGVAMLERHYAAYHQRLTELLQSGEGNYRDRILAYYQQTLNQFCQHGT
                     ISGCLTVKLSAEVCDLSEDMRSAMDKGARGVIALLSQALENGRENHCLTFCGEPLQQA
                     QVLYALWLGANLQAKISRSFEPLENALAHVKNIIATPAV"
     gene            10770..11867
                     /gene="nemA"
                     /locus_tag="JNZ57_002019"
     CDS             10770..11867
                     /gene="nemA"
                     /locus_tag="JNZ57_002019"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-ethylmaleimide reductase"
                     /protein_id="HAY8828246.1"
                     /translation="MSSEKLYSPLKVGAITAANRIFMAPLTRLRSIEPGDIPTPLMAE
                     YYRQRASAGLIISEATQISAQAKGYAGAPGIHSPEQIAAWKKITAGVHAENGHMAVQL
                     WHTGRISHASLQPGGQAPVAPSALSAGTRTSLRDENSQAIRVETSMPRALELEEIPGI
                     VNDFRQAIANAREAGFDLVELLSAHGYLLHQFLSPSSNHRTDQYGGSVENRARLVLEV
                     VDAGIEEWGADRIGIRISPIGTFQNTDNGPNEEADTLYLIEQLGKRGIAYLHMSEPDW
                     SGGEPYTDAFREKVRARFHGPIICAGAYTVEKAETLIGKGLIDAVAFGRDWIANPDLV
                     ARLQRKAELNPQRAESFYGGGAEGYTDYPTL"
     gene            11948..12355
                     /gene="gloA"
                     /locus_tag="JNZ57_002020"
     CDS             11948..12355
                     /gene="gloA"
                     /locus_tag="JNZ57_002020"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008500591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HAY8828247.1"
                     /translation="MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFV
                     GYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGP
                     VKGGTTVIAFMEDPDGYKIELIEEKDAGRGLGN"
     gene            12458..13105
                     /gene="rnt"
                     /locus_tag="JNZ57_002021"
     CDS             12458..13105
                     /gene="rnt"
                     /locus_tag="JNZ57_002021"
                     /EC_number="3.1.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T"
                     /protein_id="HAY8828248.1"
                     /translation="MSDNAQLTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITL
                     KMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSEYEALHEIFKV
                     VRKGIKASGCNRAIMVAHNANFDHSFMMAAAERASLKRNPFHPFATFDTAALAGLALG
                     QTVLSKACQTAGMDFDSTQAHSALYDTERTAVLFCEIVNRWKRLGGWPLPAAEEV"
     gene            13198..17475
                     /locus_tag="JNZ57_002022"
                     /pseudo
     CDS             13198..17475
                     /locus_tag="JNZ57_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416170.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
BASE COUNT         4033 a         4614 c         4537 g         4291 t
ORIGIN      
        1 gttccctgta taaaaaccag ggggagtgat ttctcactcc ccctttccac ttaatgcatt
       61 atttccagca aatcagacag taattctttt tgccgcgacg cagtaaggta aaacgaccaa
      121 acagacgatc ttcttcttta aagaagtatt caggatcgga ctgtttttca ccgttaatgg
      181 tgatggcatt ggaggcgata gttttacgcg cctgaccacg ggaaggttgc agttcagaat
      241 cgaccagcgc ctgcatcagg tctgcgccct tttccatctc aaccatcggt acgccgtcct
      301 gcgccagctg ttcgaagtcc gcttcactca gcgcactcaa agaaccgctg aacaggcatt
      361 cggtaatacg ttttgccgcc tgtaaacctt cttcaccgtg aaccagacga gtcacctgct
      421 ccgccagtac atactgggcg cgcggtgctt taccgctgtt tttatcttct tcttccaggg
      481 cgttgatctc ttcaatgctc ataaaggtga agaacttcag gaagcggtaa acgtcggcat
      541 ccgcagtgtt gatccagaac tggtagaatt tgtacgggct agttttcttc ggatccaacc
      601 agactgcgcc gccttcagtt ttaccaaatt tggtgccatc tgctttagtg atcagcggaa
      661 cggtcaggcc aaacacctga ttctgatgca gacgacgggt caggtcgata ccagaagtga
      721 tgttacccca ctggtcagaa ccaccaattt gcagcaccac accgtactgt ttgttcagac
      781 aggcgaagtc ataaccctgc aacaggttgt aggaaaactc agtgaacgaa atcccctgat
      841 cttcacggtt gagacgctgc ttaaccgctt ctttgttgat catctggtta acggagaagt
      901 gtttgccaat atcgcgcagg aaggtcagca cattcatatt gccgaaccag tcatagttgt
      961 tcgccgcgat agcagagttt tctccacagt cgaaatcgag gaacggggca acctgcttac
     1021 ggattttgtc cacccactcc tgaacagttt cttcggtgtt cagcttacgc tcggcagctt
     1081 tgaagctcgg gtcgccaatc agacccgtcg cgccgcctac cagcgcaacc ggcttgtggc
     1141 ccgcctgctg gaagcgtttc aggcataaca atggaacaag atgccccaaa tgcaagctgt
     1201 cagcggtagg atcgaagccg caatagagcg cgatcgggcc ttgcgccagt cgctctgcta
     1261 acgcttcctc gtccgtcacc tgggctacca gcccccgctc ttgcaattgt ttaatcaagt
     1321 tactgcttgc catcaaaatc tccatgtata taacgactgc acctttgccg gtacacgact
     1381 tttcgccaga tgcgaaagag acatagaata aagtgccaga atcaggagta ccagcgatta
     1441 aagcaagatt tttgcatctt ttcagggtgc aagacgatca atcttccacg catcattttc
     1501 tcgctggtac aaaaagcggt catgcaggcg atgctcaccg ccctgccaga actcaatctg
     1561 ttcaaggctg acgcgaaaac cgccccaaaa gctcggcaat ggcacttcgc cctgttgaaa
     1621 cttctgcttc agctccagga atttactttc aaggataccg cgggcagaaa tgcgactgga
     1681 ctgcttcgaa acccatgcac caatctggct atcacgcggg cggctatgaa aatatttcat
     1741 cacttcgaga gtcgaaagtc gttctgcttt accgatcacc atcacctggc gttcaagggt
     1801 atgccacggg aacagcaggc taacgcgcgg attattttca atttgatgtg ctttacggct
     1861 accgaggttg gtgtaaaaca ccatgccttt ttcgtcgtaa tgtttgagta aaacgatgcg
     1921 ttgataaggc tgagcatgtt catccacggt agcgaccacc atcgcggtag ggtctgccag
     1981 tttggcttca cacgcctgag agagccaacg ttcaaaaagg gttaatggat cggcgggaag
     2041 atcgcgacgg cgtaacccgc ctttggtgta ttcacggcgc agatgcgcga tttgctgcaa
     2101 ttcgtcgtta tcagacatgg ttttctttac ggattgtcag tgggtgacgc tattgtgcgc
     2161 cgcccctgga aaaatctcaa cgctgtggat tttgtaactg acagttattc aatacgatgc
     2221 ggtcgcgttt atagacagtc gcttcatcgc ctttcgacca gaaaacatag attccgtcag
     2281 tgtaacgtgc accagacgct gaaatgccct gtttgagatg cagtagttga ttatcgtaaa
     2341 caaaactgac ttcctggcgc ggattattca gtttgaccgt caacggtttt tcatcacact
     2401 ggtattccag cgtagcggtt tgcatgtgct caaccagttg attgaacgcg ctacagccgg
     2461 tgagaagcac cggcaaacag atcagtaaca gttttttcat agacatttcc cgaagacttt
     2521 cctggtctgg agggcaatac gccctcccta acgttccaag tgtaacggca gacgcggtaa
     2581 gaaaaattca gttaactctg atatcacggg ttagcaggga aaatagcccc cagtaccgtc
     2641 tcctggcttg cgccagtgac ggaaggcaga tttcttggta atcccgccag cgtccgccag
     2701 gcaagccagg cgaaagccaa tgcttccatg tcatcgccac taatgccaac ggcatcggtg
     2761 gtggtgactt ctgtgcctgg cagtaatgcc gccagacgcg ccatgagtag cggattacga
     2821 ctacctccac cacataccat caatcgttcg cagccaccgc tcaacaaaac ttgttcagaa
     2881 atggtcacgg cggtgagttc tgccagtgtg gcctgaacat cacggggatc aacacccgga
     2941 aaatggcgta aatggcgctc cagccagccg tagttaaagt attcgcgtcc ggtgcttttc
     3001 ggtgcaggtt gcgagaaata tgggtcgctg agcatatttt gcagcagtgg gagaataact
     3061 ttacccgccc gtgcccactc ggcatcttta tcgtaaggtt taccggcctg acgccagatc
     3121 caggcatcca tcagcatgtt accaggaccg gtatcgtagc cgccaaccgg ctgcccagga
     3181 atgagcagtg acagattggc gatgccgcca atattgagca ccattcgtcg ctcggttggg
     3241 tgagccagca aggcatgatg gaacgcaggt accagcggtg cgccttgtcc tcccaaggca
     3301 atatcgcgac ggcgaaaatc accgacaacc gtaattccgg tgcgtgccac aatttgattg
     3361 ttatcgccaa tctgtaaagt gtgtggtgcc acgcccgtcg gttcatgcca gacggtttga
     3421 ccgtgacagc cgatcgcaac tatatctctc gcctgcaggt tttgttcctt aagcaaggca
     3481 ttgaccgcat cagcaaaaag tcgcccgagt tgagtatcaa gctgtccaaa ctgcgaaagt
     3541 gtaagctgct ggccctggca aatatccagt acagcctgtt tcagagacac cgggatcggc
     3601 cagctcaagc ttgccagctg tgcgacccgg tgttcatcta ttgtcgccaa cacaacatca
     3661 acaccatcaa ggctggtgcc tgacataacg ccaataaagc ggcccgattt catagttcat
     3721 cctttttcaa tctgacgttt gcgcaccact caaacataaa cttttcgtga ataccatgcg
     3781 gaatgaccga tttttaccgt tggtagtaaa acattatctt caaatcaata atcatcatga
     3841 atgttttgtt tataattggt tgatcctact ttcattatga tttgctcata tttggtagaa
     3901 catgtaacca tggattcaca tatgccatat actttgacca tgagggatgc ttgcgtggcg
     3961 tttcatggtg aacaggagat ttttcaatga ttaaacgcgt attggttgtt tcaatggtag
     4021 gtctgtctct tgtcggttgt gttaataacg acaccctgtc aggggatgtt tataccgctt
     4081 ctgaagcgaa acaagtacaa aatgtcagct atggcaccat cgttaacgta cgtccggtac
     4141 agattcaggg cggtgatgat tccaacgtta tcggtgcaat tggcggtgct gttcttggtg
     4201 gtttcctggg gaatactgtt ggtggcggaa ccgggcgttc tctggctact gcagcaggcg
     4261 ctgttgcagg tggcgtagct ggtcagggcg tacagagtgc aatgaacaaa acgcagggtg
     4321 tcgagctgga aattcgtaaa gacgatggta ataccatcat ggtggtacag aaacaaggca
     4381 acactcgttt ctctccgggc caacgtgtcg tactggccag caatggcagt caggtgaccg
     4441 tttctccgcg ctaaataagt ttgcgtgtgg tcaggttact gaccacacgc ccccttcatt
     4501 tcaccctttg gcctgtaact caatgatatt atgctcaagt tttgcgatga gcgtaatcag
     4561 ttgctccagt tcctctgcgg agatgccatg taatatttcc gcgcaggttt tgttaataac
     4621 agcttccatt tcgctgatca gtggctctgc cttttccgtc agtttaatac gtttagcccg
     4681 acgatcgctg gcacaagttt gacgcgaaat taaccctttt tcttccagtt ggtccagagt
     4741 acggaccagt gatggctgct cgatgccaat cgcttttgcc agttgaattt gcgactggtc
     4801 tggaggtaac tgatggatat tgtgtaacgt aacccaatgg gtttgtgtta actccagcgg
     4861 tttcaggcga tggtctatca gagcacgcca tatgcgcacc aaccgtgcca gatcagaacc
     4921 tagtggcgat tccaatttca tctccttata attagcttgc taagatatta tgcggctttt
     4981 agaatagtgt gcagcaattt tattgctaaa acaaatgtat tgctgcattt ggttaccgtc
     5041 agacatattt ttcagaaatt gcgcgtaaat ttttcgcact taaagaatat ttattaatct
     5101 aacgcaatat attcggtcgt aaaggaatct actttgtgaa gtttatgctc aatgcaacag
     5161 gattgccctt acaagatctg gtgttcggtg cgtccgtcta ttttcctccg tttttcaaag
     5221 ccttcgcgtt tggattcgtc atctggcttg tcgtacaccg cctgcttcgt ggctggatct
     5281 acgccggtga catctggcat cccttgtaaa tggatttatc gctgtttgcg atttgcgttt
     5341 gccttgctct ggcaatactg attgcgtggt aactatgtca attaaaacaa ttaagtattt
     5401 ctcaacaatc attgtagcga tagttgcggt tcttgccgga tggtggctgt ggaattatta
     5461 catgcaatct ccgtggacac gcgacgggaa aatacgcgca gaaaaagttt ctatcacccc
     5521 acaggtgtcg ggacgtattg ttgagctgaa tataaaagac aaccaactgg ttaacgcggg
     5581 ggatcttctg ctcacgatcg ataaaacgcc ctttcagatc gccgagctga acgcacaggc
     5641 tcagctggcg aaagcgcaat ctgacctcgc aaaagccaat aacgaagcga atcgtcgtcg
     5701 tcatctctca caaaatttta tttctgccga agaactcgat accgctaacc tcaatgttaa
     5761 agcgatgcag gccagtgtta atgccgcaca ggccacgctg aaacagacac aatggcaact
     5821 ggcgcaaacg gaaattcgcg ccccggtgag tggttgggtg actaacctca ctacccgcat
     5881 cggcgattac gctgacaccg ggaaaccgct gtttgccctt gtcgacagcc actcgtttta
     5941 cgtcattggt tattttgaag aaaccaagtt gcgccatatc cgcgaaggtg caccagcaca
     6001 aattaccctc tatagtgata acaaaacgtt acggggtcac gtttccagta tcggtcgggc
     6061 gatttatgat caaagcgttg aaagtgactc aagccttatt ccggatgtga aacctaacgt
     6121 cccctgggtt cgtctcgccc aacgcgttcc cgtccgcttt gcgctggata aagttccagg
     6181 cgatgtcacg ctggtgtcgg gcaccacctg tagcattgcc gtaggtcaat aatgaacgca
     6241 tcgtcatggt ccttgcgcaa tttgccctgg ttcaaggcca cgctggcgca atggcgttat
     6301 gcgttacgca ataccattgc catgtgtctg gcgctgacgg ttgcctatta tttgaatctg
     6361 gatgaaccct attgggcgat gacctcggct gcagtggtta gctttcccac cgttggcggt
     6421 gtcatcagca aaagcctcgg acgcatcgct ggcagtttac tgggagccat tgcggcactg
     6481 cttcttgccg ggcatacgct caatgagccg tggttttttc tattgagcat gtcggcgtgg
     6541 cttggctttt gtacctgggc ctgtgcgcac ttcacgaata acgtcgcgta tgcatttcaa
     6601 ctggcgggct acacggctgc catcatcgcc tttccgatgg ttaatattac tgaggccagc
     6661 cagctgtggg atatcgctca ggcgcgcgtt tgcgaggtga tagtcggtat tttgtgcggc
     6721 ggcatgatga tgatgatcct gcctagcagt tccgatgcta cagccctttt aaccgcattg
     6781 aaaaacatgc acgcccaatt actggaacat gccagtttac tctggcagcc tgaaacaaac
     6841 gatgccattc gtgcagcaca tgaggggggg attgggcaga tactgaccat gaatttgctg
     6901 cgtatccagg ctttctggag ccactatcgt tttcgccagc aaaacgcgcg ccttaatgcg
     6961 ctactccacc agcaattacg tatgaccagt gtcatctcca gcctgcgacg tatgttgctc
     7021 aactggccct caccgccagg tgccacgcga gaaattctcg aacaattgct gacggcgctc
     7081 gccagttcgc aaacagatgc ttacaccgtc gcacgtatta tcgccccgct acgcccgacc
     7141 aacgtcgccg actaccggca cgtcgccttc tggcagcgac tacgttattt ttgccgcctt
     7201 tatctgcaaa gtagtcagga attacatcgt ctgcaaagcg gtgtagatga tcatgccaga
     7261 ctcgcacgga catccgctct ggctcgtcat accgacaacg ccgaagctat gtggagcggg
     7321 ctgcgtacat tttgtacgtt gatgatgatt ggcgcatgga gtattgcatc gcaatgggat
     7381 gccggtgcca atgcattaac gctggcagca attagctgcg tactctactc cgccgtcgca
     7441 gcaccgttta agtcgttgtc actgctgatg cgcacgctgg tgttactttc gctattcagc
     7501 tttgtggtca aatttggcct gatggtccag attagcgatc tgtggcaatt tttactgttt
     7561 ctctttccac tgctggcgac aatgcagctt cttaaattgc agatgcccaa atttgccgca
     7621 ctgtgggggc aactgattgt ttttatgggt tcgtttatcg ctgtcactaa tcccccggtg
     7681 tatgattttg ctgattttct taacgataat ctggcaaaaa tcgttggcgt tgcgctggct
     7741 tggctagcgt tcgccattct gcgtccagga tcggatgctc gtaaaagccg ccgccatatt
     7801 cgcgcgctgc gccgggattt tgtcgatcag ctaagccgcc atccaacact gagtgaaagc
     7861 gaatttgaat cgctcactta tcatcacgtc agtcagttga gtaacagcca ggatgcgctg
     7921 gctcgccgtt ggttattacg ctggggtgta gtgctgctga actgttctca tgttgtctgg
     7981 caattgcgcg actgggaatc gagttccgat ccgttatcgc gagtacggga taactgtatt
     8041 tcactgttgc ggggagtgat gagtgagcgt ggcgttcagc aaaaatcact ggcggccaca
     8101 cttgaagaat tacagcggat ttgcgacagc cttgcccgtc atcatcaacc tgccgcccgt
     8161 gagctggcgg caattgtctg gcggctgtac tgctcgcttt cgcaacttga gcaagcacca
     8221 ccgcaaggta cgcaggcctc ttaattactt aattacacca caggcatagc gttcaccgcc
     8281 accgcccagc ggtttaggtt gatcggacat attatcgccg ccaacgtgga ccatcagcgc
     8341 tttgtctttg atttcatcca gtgatttcag acgaggcgtg atgacggcat cggtagcttt
     8401 gccgtcatta ttgacgacca gtgcaggcag atcgcctaaa tgcccggcac cttctggccc
     8461 ttcatgttta ccggtatttt gtggatcaag atgcccgcct gcggattccg cggcgctggc
     8521 tttgccatct ttggtggctg gctggcagct tcctttggca tgaatatgga agccatgttc
     8581 accggggggt aatgctttca gatcgggcga aaactccaga cctttatcgg tttcagtaat
     8641 ggtgacgcta ccaattgact gccctacccc ttgcgacgtg acgaggttca tctcgacttt
     8701 ttcactggca gcttgtgcgc cggttgcaac aaccagcgcc agaatagcca gactaaaacg
     8761 tttcatagga cctccgttca ttgtgcattc ctgaataagt gtaaaccagt gacacatttt
     8821 tgaacggcgg ctattcctaa aagtgcttac ggtacgtcgt accccagtgc cgctttacgg
     8881 atacgaaacc attgttgacg ggtcattttc agtgtttctg cttcgacagc tgcccgtacg
     8941 cgctcaattt tacctgaacc gataattggc agcggctgcg atggtaaacg taatacccag
     9001 gcgtaaacca cctgttcaat cgagcccgcg tttaactcct ctgccaccac agccagttca
     9061 tcacgcagcg gctggaaata atcatcatta aacagacgac caccaccaag gcaggaccac
     9121 gccatcggac gaacacgcag ttgttgtagt tggtcgagcg tgccatccag cagtaacggc
     9181 tgatgcaccg gggatatttc cacctgatta gtggcaaggg taaacggcag acgtgattgc
     9241 aacagggcaa attgcgcagg cgtaaagttc gatacgccaa aatgacgcac tttgccgctc
     9301 tgatgcagat gtttgaacgc gtccgccact tcatcggcat ccattaacgg gtctggtcgg
     9361 tggattaaca gcagatccag atgatcggtc gcgagattaa ttagcgactg ttcggcgctc
     9421 ttaatgatgt gatcgcggtc agtgatgtaa tgaccaatga cgttttcttc acgcgcggtc
     9481 gtcgcgatac cgcatttact gacgatttcc atccgttcac acaggtgagg tgccagtttc
     9541 agtgcctcgc caaacgccgc ttcgcactga tagccaccat aaatatcagc atggtccacg
     9601 gtggtcacgc cgagatccag atgctcttca ataaaactga ccagctggcg ggcggacata
     9661 ttccagtcca tcaatcgcca gtagcccatc acaaaacggg aaaactccgg gccttgcggc
     9721 gcaatagtaa tacgctgaac cataatcgct tcctcttatc agatatgaga ggagtatacg
     9781 caagattagg ttcaaaagag tgatggttgc tccggttcgt ctgatgacgc tggcttattt
     9841 gcgcgtaatt tgcgcattaa tcgctgccga caaaggcgca gcacctcttg tttttctcca
     9901 tcgctcattt tattccagtt aaaacgctca tcccgactac gaaaacagcc gcgacaaaac
     9961 ccgcgttcgt cagactggca aattccccgg cacgggctct ggacgggaaa gaactctaat
    10021 tgctccgcca cttcgccctc ctcagataag attattacca ttattgaagc tgttaatgtc
    10081 caaagtagca actttgctcg cactagaccg actggtctgc tacactccaa cgcatgaaca
    10141 aacacaccga acatgatact cgcgaacatc tcctggcgac gggcgagcaa ctttgcctgc
    10201 aacgtggatt caccgggatg gggctaagcg aattactaaa aaccgctgaa gtgccgaaag
    10261 ggtccttcta tcactacttt cgctctaaag aagcgtttgg cgttgccatg cttgagcgtc
    10321 attacgccgc atatcaccag cgactgactg agttgctgca atccggcgaa ggtaactacc
    10381 gcgaccgcat actggcttat taccagcaaa cactgaacca gttttgccaa catggaacca
    10441 tcagtggttg cctgacagta aaactctctg ccgaagtgtg cgatctgtca gaagatatgc
    10501 gcagcgcgat ggataaaggt gctcgcggcg tgatcgccct gctctctcag gcgctggaaa
    10561 atggccgtga gaaccattgt ttaacctttt gtggcgaacc gctacaacag gcacaagtgc
    10621 tttacgcact atggctgggt gcgaatctgc aggccaaaat ttcgcgcagt ttcgagccac
    10681 tggaaaacgc gctggcccat gtaaaaaaca ttattgcgac gcctgccgtt tagcaggcat
    10741 tttttatcac cagacgaccg ggagccttta tgtcatctga aaaactgtat tccccactga
    10801 aagtgggcgc gatcacggcg gcaaaccgta tttttatggc accgctgacg cgtctgcgca
    10861 gtattgaacc gggtgacatt cctaccccgt tgatggcgga atactatcgc caacgtgcca
    10921 gtgccggttt gattattagt gaagccacgc aaatttctgc ccaggcaaaa ggatatgcag
    10981 gtgcgcctgg catccatagt ccggagcaaa ttgccgcatg gaaaaaaatc accgctggcg
    11041 ttcatgctga aaatggtcat atggccgtgc agctgtggca caccggacgc atttctcacg
    11101 ccagcctgca acctggcggt caggcaccgg tagcgccttc agcacttagc gcgggaacac
    11161 gtacttctct gcgcgatgaa aatagtcagg cgatccgtgt tgaaacatcc atgccgcgtg
    11221 cgcttgaact agaagagatt ccaggtatcg tcaatgattt ccgtcaggcc attgctaacg
    11281 cgcgtgaagc cggttttgat ctggtagagc tcctctctgc tcacggttat ttgctgcatc
    11341 agttcctttc tccttcttca aaccatcgta ccgatcagta cggcggcagc gtggaaaatc
    11401 gcgcacgtct ggtactggaa gtggtcgatg ccgggattga agaatggggt gccgatcgca
    11461 ttggcattcg catttcgcca atcggtactt tccagaacac ggataacggc ccgaatgaag
    11521 aagccgatac actgtatctg attgaacaac tgggtaaacg cggcattgct tatctgcata
    11581 tgtcagaacc agattggtcg gggggtgaac cgtatactga tgcgttccgc gaaaaagtac
    11641 gcgcccgttt ccacggtccg attatctgcg caggtgcata cacagtagaa aaagctgaaa
    11701 cgctgatcgg caaagggtta attgatgcgg tggcatttgg tcgtgactgg attgcgaacc
    11761 cggatctggt cgcccgcttg cagcgcaaag ctgagcttaa cccacagcgt gccgaaagtt
    11821 tctacggtgg cggcgcggaa ggctataccg attacccgac gttgtaatcc aacattgcga
    11881 gcggcgtaaa gccgccgcta tactaaaaca acattttgaa tctgttagcc attttgagga
    11941 taaaaagatg cgtcttcttc ataccatgct gcgcgttggc gatttgcaac gctccatcga
    12001 tttttatacc aaagtgctgg gcatgaaact gctgcgtacc agcgaaaacc cggaatacaa
    12061 atactcactg gcgtttgttg gctacggccc ggaaaccgaa gaagcggtga ttgaactgac
    12121 ctacaactgg ggcgtggata aatacgaact cggcactgct tatggtcaca tcgcgcttag
    12181 cgtagataac gccgctgaag cgtgcgaaaa aatccgtcaa aacgggggta acgtgacccg
    12241 tgaagcgggt ccggtaaaag gcggtactac ggttatcgcg tttatggaag atccggacgg
    12301 ttacaaaatt gagttaatcg aagagaaaga cgccggtcgc ggtctgggca actaatctcc
    12361 tgccgggcgt gaactcatcg cgcccgcatc tttactgcat cgacaagtaa tatttgtcat
    12421 aatgcgcgct gcaatttatc cgtattaaga gaatcagatg tccgataacg ctcaacttac
    12481 cggtctgtgc gaccgttttc gtggttttta tcctgttgtg atcgatgttg aaacagccgg
    12541 atttaacgcc aaaaccgatg cgctgcttga gattgccgcc atcaccctga aaatggatga
    12601 acaaggctgg ctgatgccgg acaccacatt acatttccac gtcgaaccat ttgtcggcgc
    12661 aaatttgcaa ccagaagccc tcgccttcaa cggcattgac ccgaacgatc ccgatcgcgg
    12721 cgcggtcagc gaatacgagg cgctgcacga aatttttaaa gttgtacgta aaggtattaa
    12781 agcgagcggc tgtaaccgcg ccattatggt ggcgcacaat gccaattttg atcacagctt
    12841 tatgatggcc gccgcagaac gcgcctcact taaacgtaac ccgttccacc ctttcgccac
    12901 ttttgacact gctgcactgg ccgggctggc actcggacaa accgtattgt caaaggcttg
    12961 ccagaccgct ggcatggact tcgacagcac ccaggcgcac tccgcgctgt acgacaccga
    13021 acgcactgct gtgctgtttt gtgaaatcgt caaccgctgg aaacgtctgg gaggctggcc
    13081 gctacctgcc gccgaagagg tgtaatcgag tcgatgcctg atgacatgca atgattcagg
    13141 catctatagt gaggctattc cacgcatcct gcatgatatt cacggggaat agcgttaatg
    13201 gcagataatc cagacccttc atcgctcctg ccggacgtgt tttcaccggc gacccgcgac
    13261 tggtttcttc gcgcctttaa acagccgacc gctgtccagt cgcaaacctg gcatgtggcg
    13321 gcgcgaagcg aacatgcgct ggtgattgca ccgaccggct ccgggaaaac gctggcagca
    13381 tttctctacg ccctcgatcg gctcttccgc gaaggcggcg aagatacccg cgaggcgcat
    13441 aagcgtaaaa cctcacgcat cctctatatt tcaccgataa aagctctggg caccgacgtt
    13501 cagcgcaact tgcagctccc gttgaagggt attgccgatg aacggcggcg gcgcggcgaa
    13561 acggtaatta ttgatgaagt ccacgcggta gcgggcagta aacgtggtgc gcatctggcg
    13621 ttaaatctgg agcggctcga tgcgctgctc cacacctcag cacagcgaat tggcctttct
    13681 gccactgtgc gctcagccag cgatgtggca gcctttcttg gtggcgatcg cccggttacg
    13741 gtagtcaacc cgcccgcaat gcgccatccg cagatacgaa ttgtcgtacc ggtcgccaat
    13801 atggatgatg tctcatcggt cgccagcagc accggcgaag acagccatgc cggccgggaa
    13861 ggctccatct ggccatatat tgaaacgggt atccttgatg aagtgttgcg ccatcgctcg
    13921 accattgtct ttactaattc acgtgggctg gcggaaaaac tgacggcacg attaaatgag
    13981 ctttacgccg cacgcttaca gcgttccccg tctatcgccg ttgatgcggc ccatttcgag
    14041 tcgacctccg gcgcaacctc taaccgtgta caaagtagcg acgtttttat tgcccgctca
    14101 caccacggct ccgtctctaa agaacaacga gcaatcaccg agcaggcgct gaaatcgggt
    14161 gagttacgct gcgtggtcgc aacctccagt ctcgaactgg ggattgatat gggcgcagtg
    14221 gatctggtga ttcaggtggc aacgccgctt tctgttgcca gtgggttaca acgcattggt
    14281 cgcgccggac atcaggttgg cggtgtatct aaagggctgt ttttccctcg tacccggcgt
    14341 gacttagtcg attccgcagt cattgtagag tgtatgttcg caggcaggct ggaaaacctg
    14401 acaccccgca taatccactc gacgtccttg cgcagcaaac cgttgccgcc gcggcgatgg
    14461 aggcattaca ggtagacgaa tggtactccc gcgtacgccg tgccgcaccg tggaaagatc
    14521 tgccaagacg tgtttttgac gccacgctgg atatgctttc cgggcgctat ccctctggcg
    14581 atttttctgc ttttcgcccc aaactggtct ggaacaggga gaccgggata ttgaccgccc
    14641 gacctggcgc tcaattgttg gcggttacca gcggcggcac cattccggat cgtggcatgt
    14701 atagcgtgtt attacccgaa ggtgaagaaa aggccggttc gcggcgggtg ggtgaactgg
    14761 atgaggagat ggtatatgag tcgcgggtga acgacattat cactctcgac gctacctcat
    14821 ggcggatcca gcaaatcacc cgcgatcagg tgattgtgac tcctgctccg ggtcgttctg
    14881 cccggctccc cttctggcgt ggtgaaggta acggacgtcc ggctgaatta ggcgagatga
    14941 tcggcgattt tcttcattta ctggcggatg gcgcgttctt ttccgggact attcccccgt
    15001 ggctggcaga agaaaatacg aacgccaata ttcaggggtt gattgacgag caacgcaacg
    15061 cgacgggcat cgttccgggg agtcgccatc tggtcctcga acggtgccgt gatgaaattg
    15121 gcgactggcg tattattttg cactctccct atggaagacg ggtgcatgaa ccctgggcgc
    15181 tggcgattgc cgggcgaata catgccctat ggggcgctga cgcgtctgtg gtcgccagtg
    15241 atgacggcat tgttgcgcgc attcctgaca ctgatggtaa attgcccgac gccgcgattt
    15301 ttttgtttga accagaaaag ttgctgcaaa ttgtccgcga ggcggtaggc agctcggcac
    15361 ttttcgccgc ccgttttcgc gaatgcgccg cgcgggcatt attaatgccg gggcgcactc
    15421 cgggccatcg caccccgctt tggcaacaac ggctgcgcgc cagtcagttg ctggaaatcg
    15481 ctcagggata tccagatttt ccggtcattc tcgaaatcct acgcgaatgt ctgcaagatg
    15541 tttatgatct tcccgcactg gaacgtttga tgcgtcgcct gaacggtggc gaaattcaaa
    15601 tatccgatgt aacgaccact acgccctcgc ctttcgccac aagtttattg ttcggctatg
    15661 tcgcggaatt tatgtaccag agcgacgccc cgctggcaga gcgccgggca tccgtactgt
    15721 cgctggacag cgagttactg cgcaatctac tcggacaggt cgatccgggg gaattactcg
    15781 acccgcaggt cattcgccag gtggaagaag agttgcaacg actggctcct ggcagaagag
    15841 cgaaaggtga agaaggattg ttcgacctgc tgcgcgaact ggggccaatg accgttgaag
    15901 acctggcgca acggcataca ggcagcagtg aagaggttgc gtcgtatctg gaaaatcttc
    15961 ttgcagtaaa acgaatcttc ccagcgatga ttagcggaca ggagcgtctt gcctgtatgg
    16021 atgatgccgc caggctgcgt gatgccctcg gcgtacgact accagagtca ttgccagaga
    16081 tttatttaca tagagtcagt tacccgcttc gcgacctctt tctgcgctat ctccgggctc
    16141 atgctctggt cacggctgaa caactggctc atgagtttag tctcggtatt gccattgtcg
    16201 aagagcagct tcagcaactg cgtgaacagg gtctggtgat gaatctgcaa caagacatct
    16261 gggtgagcga tgaagtattt cgtcgtctgc gtttgcgctc gctgcaagcc gccagagaag
    16321 cgacgcgtcc cgttgcagcc acgacctatg cgcgattgct gctggaacgt cagggcgtat
    16381 tacccgccac cgatggtagc ccggcgctct ttgcctcaac atcgccaggc gtttatgagg
    16441 gcgtagatgg cgtgatgcgg gtgatcgaac agcttgccgg agtcggttta cccgcctcac
    16501 tctgggaaag ccagatcctg cctgcccgcg tacgcgacta ttcgtcagaa atgctcgatg
    16561 aattactggc aaccggtgcg gttatctggt cggggcaaaa aaaactgggt gaagatgacg
    16621 gcctggtggc actgcatcta caggaatatg ctgcagaatc gttcactccc gccgaagcgg
    16681 atcaggcgaa tcgttcggcg ctgcaacaag cgatagtcgc tgttctggct gacggaggag
    16741 cctggtttgc acaacaaatc agccaacgga tacgcgacaa aatcggcgaa tcggttgatc
    16801 tctctgccct gcaagaggcg ttatgggcgc tggtctggca aggcgtcatc accagcgaca
    16861 tttgggcacc gttacgcgcc ctcacccgca gcagttccaa cgcacgcacc tcaactcgcc
    16921 gcagtcaccg ggctcgtcgt ggacgtcctg tctatgcgca acccgtctcg ccgctggtat
    16981 cttacaacac accaaatctg gctggacgct ggtcgttatt gcaggtggag ccactaaacg
    17041 ataccgaaag gatgctggcg ctggcggaaa atatgctcga ccgctacggc atcatcagtc
    17101 gtcaggcggt gatagccgaa aatatccctg gcgggtttcc atcgatgcaa acgctttgtc
    17161 gaagtatgga agactccggg cgaattatgc gaggtcgttt tgtagaaggt ctgggtggcg
    17221 cgcaattcgc tgaacgtctg actattgacc gatggcgcga tctggcgaca caagccacgc
    17281 aaacgcgcca ctatacacca gtggcgctct ctgccaacga tccggctaat gtgtggggaa
    17341 atcttctgcc ctggcctgca catccggcaa cgctggttcc aacgcgtcgg gcgggtgcgc
    17401 tggtggtcgt ttctagcggc aaattgttac tctatctggc gcaaggtggc aaaaaaatgc
    17461 tggtctggca ggaaa
//
LOCUS       DADMHC010000072        16934 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.072, whole genome shotgun sequence.
ACCESSION   DADMHC010000072 DADMHC010000000
VERSION     DADMHC010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16934)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16934)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16934
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.072"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..1117
                     /locus_tag="JNZ57_002023"
     CDS             <1..1117
                     /locus_tag="JNZ57_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311443.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HAY8828249.1"
                     /translation="RANKSTLARLAQISIPAVSNILQELESEKRVVNIDDESQTRGHS
                     SGTWLIAPEGDWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDAPTPQALLSEIEKC
                     WHRHRKLWPDRTINLALAIHGQVDPVTGVSQTMPQAPWTTPVEVKYLLEEKLGIRVMV
                     DNDCVMLALAEKWQNNSQERDFCVINVDYGIGSSFVINEQIYRGSLYGSGQIGHTIVN
                     PDGVVCDCGRYGCLETVASLSALKKQARVWLKSQPVNTQLDPEKLTTAQLIAAWQSGE
                     PWITSWVDRSANAIGLSLYNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPFDR
                     DEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI"
     gene            complement(1181..2434)
                     /locus_tag="JNZ57_002024"
     CDS             complement(1181..2434)
                     /locus_tag="JNZ57_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019077397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HAY8828250.1"
                     /translation="MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVM
                     QAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQAN
                     FAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEK
                     QAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVP
                     HAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVAL
                     KEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEAD
                     AALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDS
                     INDEAVIERIKGKVLDICARYPVYA"
     gene            2762..3952
                     /gene="hmpA"
                     /locus_tag="JNZ57_002025"
     CDS             2762..3952
                     /gene="hmpA"
                     /locus_tag="JNZ57_002025"
                     /EC_number="1.14.12.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NO-inducible flavohemoprotein"
                     /protein_id="HAY8828251.1"
                     /translation="MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFN
                     MSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHL
                     LATLDEMFSPGQEVLDAWGKAYGVLANVFINREAEIYNENASKAGGWEGTRDFRIVAK
                     TPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYR
                     IAVKREEGGQVSNWLHNHANVGDVVKLVAPAGDFFMAVADDTPVTLISSGVGQTPMLA
                     MLDTLAKAGHTAQVNWFHAAENGDVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAK
                     GQFDSEGLMDLSKLEGAFSDPTMQFYLCGPVGFMQFTAKQLVDLGVKQENIHYECFGP
                     HKVL"
     gene            complement(3997..4335)
                     /gene="glnB"
                     /locus_tag="JNZ57_002026"
     CDS             complement(3997..4335)
                     /gene="glnB"
                     /locus_tag="JNZ57_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017373484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulatory protein P-II"
                     /protein_id="HAY8828252.1"
                     /translation="MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTE
                     LYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRI
                     RTGEEDDAAI"
     gene            complement(4396..5730)
                     /gene="glrR"
                     /locus_tag="JNZ57_002027"
     CDS             complement(4396..5730)
                     /gene="glrR"
                     /locus_tag="JNZ57_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator GlrR"
                     /protein_id="HAY8828253.1"
                     /translation="MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRV
                     LNREKVDLVISDLRMDEMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFS
                     FLTKPVDKDALYQAIDDALEQSAPATDERWREAIVTRSPLMLRLLEQARLVAQSDVSV
                     LINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVS
                     NREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISAT
                     HRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVR
                     AFSTDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVISDALVEQALEGENTALPTFV
                     EARNQFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHELDANDFKE"
     gene            complement(5720..6433)
                     /gene="qseG"
                     /locus_tag="JNZ57_002028"
     CDS             complement(5720..6433)
                     /gene="qseG"
                     /locus_tag="JNZ57_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system QseEF-associated
                     lipoprotein QseG"
                     /protein_id="HAY8828254.1"
                     /translation="MRHIFQRLLPRRLWLAGLPCLALLGCVQNHNKPAIDTPAEEKIP
                     VYQLADYLSTECSDIWALQGKSTETNPLYWLRAMDCADRLMPAQSRQQARQYDDGSWQ
                     NTFKQGILLADAKITPYERRQLVARIEALSTEIPAQVRPLYQLWRDGQALQLQLAEER
                     QRYSKLQQSSDSELDTLRQQHHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDT
                     PHESEKPAPSTHEVTPDEP"
     gene            complement(6598..8025)
                     /gene="qseE"
                     /locus_tag="JNZ57_002029"
     CDS             complement(6598..8025)
                     /gene="qseE"
                     /locus_tag="JNZ57_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417051.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two component system sensor histidine kinase
                     QseE/GlrK"
                     /protein_id="HAY8828255.1"
                     /translation="MKRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQA
                     ALVNRTTLIDARRSEAMTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHA
                     GVLPDDKLYQALRQDLNNLAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSR
                     GQQLQREIAERGQYFGWQSLVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLG
                     NSVSFSGPSELRSVGQRILWLSERLSWLESQRHQFLRHLSHELKTPLASMREGTELLA
                     DQVVGPLTPEQKEVVSILDSSSRNLQKLIEQLLDYNRKQADSAVELENVELAPLVETV
                     VSAHSLPARAKMMHTDVDLKATACLAEPMLLMSVLDNLYSNAVHYGAESGNICLRSSS
                     HGARVYIDVINTGTPIPQEERAMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQG
                     ELYLVDESGQDVCFRIELPSSKNTK"
     gene            complement(8583..12470)
                     /gene="purL"
                     /locus_tag="JNZ57_002030"
                     /gene_synonym="purI"
     CDS             complement(8583..12470)
                     /gene="purL"
                     /locus_tag="JNZ57_002030"
                     /gene_synonym="purI"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006683423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HAY8828256.1"
                     /translation="MMEILRGSPALSAFRINKLLARFQAARLPVHNIYAEYVHFADLN
                     APLNDDEHAQLERLLKYGPALASHAPQGKLLLVTPRPGTISPWSSKATDIAHNCGLQQ
                     VNRLERGVAYYIEAGTLTNEQWQQVTAELHDRMMETVFFDLDDAEQLFAHHQPTPVTS
                     VDLLGQGRQALIDANLRLGLALAEDEIDYLQDAFTKLGRNPNDIELYMFAQANSEHCR
                     HKIFNADWIIDGEQQPKSLFRMIKNTFETTPDHVLSAYKDNAAVMEGSEVGRYFADHE
                     TGRYDFHQEPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVG
                     FSVSNLRILGFEQPWEEDFGKPERIVTALDIMIEGPLGGAAFNNEFGRPALNGYFRTY
                     EEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQKGEINVGAKLVVLGGPAMNIGLGG
                     GAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQLGDANPILFIHDVGAGGL
                     SNAMPELVSDGGRGGKFELRDILSDEPGMSPLEIWCNESQERYVLAVAADQLPLFDEL
                     CKRERAPYAVIGEATEELHLSLHDRHFDNQPIDLPLDVLLGKTPKMTRDVQTLKAKGD
                     ALVREGITIADAVKRILHLPTVAEKTFLVTIGDRSVTGMVARDQMVGPWQVPVANCAV
                     TTASLDSYYGEAMAIGERAPVALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANW
                     MAAAGHPGEDAGLYEAVKAVGEELCPALGLTIPVGKDSMSMKTRWQEGNEEREMTSPL
                     SLVISAFARVEDVRHTITPQLSTEDNALLLIDLGKGNNALGATALAQVYRQLGDKPAD
                     VRDVAQLKGFYDAIQALVAQRKLLAYHDRSDGGLLVTLAEMAFAGHCGINADIASLGD
                     DRLAALFNEELGAVIQVRAADREAVESVLAQHGLADCVHYVGQAVSGDRFVITANGQT
                     VFSESRTTLRVWWAETTWQMQRLRDNPECADQEHQAKSNDADPGLNVKLSFDINEDVA
                     APYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLTGRTGLEDFHAL
                     VACGGFSYGDVLGAGEGWAKSILFNDRVRDEFATFFHRPQTLALGVCNGCQMMSNLRE
                     LIPGSELWPRFVRNTSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVR
                     DAAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITAVTTESGRVTIMMPHPE
                     RVFRTVSNSWHPENWGEDGPWMRIFRNARKQLG"
     gene            12727..14283
                     /gene="mltF"
                     /locus_tag="JNZ57_002031"
     CDS             12727..14283
                     /gene="mltF"
                     /locus_tag="JNZ57_002031"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417053.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltF"
                     /protein_id="HAY8828257.1"
                     /translation="MKKLKINYLFIGILALLLAVALWPSIPWFGKADNRIAAIQARGE
                     LRVSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNA
                     DLLAAGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLCNLTAEQLTVAPGHVV
                     VNDLQTLKETKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELA
                     VALDITDEQPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVD
                     TRTFLRAVDAVLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLT
                     KNTAQSLGITDRTDAEQSISGGVRYLQDMMSKVPESVPENERIWFALAAYNMGYAHML
                     DARALTAKTKGNPDSWADVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQIS
                     LVGYLQEKEKQATEAAMQLAQDYPAVSATELGKEKFPFLSFLSQSSSNYLTHSPSLLF
                     SRKGSEEKQN"
     gene            complement(14280..14816)
                     /gene="tadA"
                     /locus_tag="JNZ57_002032"
     CDS             complement(14280..14816)
                     /gene="tadA"
                     /locus_tag="JNZ57_002032"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HAY8828258.1"
                     /translation="MRRAFITGVFFLSEVEFSHEYWMRHALTLAKRAWDEREVPVGAV
                     LVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCA
                     GAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFF
                     RMRRQEIKAQKKAQSSTD"
     gene            complement(14841..15476)
                     /gene="yfhb"
                     /locus_tag="JNZ57_002033"
     CDS             complement(14841..15476)
                     /gene="yfhb"
                     /locus_tag="JNZ57_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417055.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase C"
                     /protein_id="HAY8828259.1"
                     /translation="MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPL
                     LPIIAIALLIKGRAARWPMSLLLWGCTFGHSEARLQTLQADFVRWFRDNVTAFPLVQE
                     RLTTYLLSSDADIWLITGSPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCL
                     GHEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE"
     gene            15685..16533
                     /locus_tag="JNZ57_002034"
     CDS             15685..16533
                     /locus_tag="JNZ57_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417056.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HAY8828260.1"
                     /translation="MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEA
                     GVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKL
                     IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN
                     AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN
                     ALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA
                     LVKKLV"
     gene            16589..16849
                     /gene="yfhL"
                     /locus_tag="JNZ57_002035"
     CDS             16589..16849
                     /gene="yfhL"
                     /locus_tag="JNZ57_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster ferredoxin YfhL"
                     /protein_id="HAY8828261.1"
                     /translation="MALLITKKCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGH
                     YETPTCQKVCPIPNTIVKDPAHVETEEQLWDKFVLMHHADKI"
BASE COUNT         4092 a         4497 c         4368 g         3977 t
ORIGIN      
        1 gcgcgccaat aaatcaacgc tggcccggct ggcgcaaatt tcgattccgg cagtcagtaa
       61 tattttgcag gaactggaaa gcgaaaaacg ggtggtgaat attgacgatg aaagccagac
      121 gcgcgggcat agtagcggta catggctgat tgcgccggaa ggtgactgga cgctgtgcct
      181 gaacgtgacg cccaccagta ttgagtgtca ggttgctaat gcttgtttaa gtccgaaagg
      241 tgaatttgag tatttacaga ttgatgcacc gacgccgcag gcgctgctgt ccgaaatcga
      301 aaaatgctgg catcgccacc gtaaattgtg gccggaccgc accatcaatc tggcgctggc
      361 aatccacggt caggttgatc cggtgaccgg cgtgtcgcaa accatgccgc aagcgccgtg
      421 gacaacgccg gttgaggtga agtatctgct ggaagagaag ctgggcattc gggtgatggt
      481 cgataatgac tgcgtgatgc tggcgctggc ggagaaatgg caaaataatt cgcaggaacg
      541 ggatttctgc gtgatcaacg ttgattacgg cattggctcg tcgttcgtga ttaacgagca
      601 aatttatcgc ggcagtttgt atggtagcgg acaaattggt cacaccatcg ttaatccgga
      661 tggcgtcgtc tgcgactgtg gacgttacgg ctgcctggaa accgtcgcct cgttaagtgc
      721 attaaaaaaa caggcgcggg tatggctaaa atcacaaccg gttaatactc agcttgatcc
      781 tgaaaaactg acaaccgcgc agttaatcgc tgcctggcag agtggagaac cgtggatcac
      841 cagctgggtt gatcgctctg ccaatgccat tggtttgagt ctgtataact tcctcaacat
      901 cctcaatatt aatcagattt ggttgtacgg tcgcagttgt gcctttggtg agaactggct
      961 taatactatt attcgccaga caggatttaa cccgttcgac cgcgacgaag gaccgagcgt
     1021 gaaagcgacg caaattggct tcgggcaatt aagccgcgca caacaggtgc tgggaattgg
     1081 ctatttgtat gttgaggcgc agttacgaca gatttgatgg cgcgataacg tagaaaggct
     1141 tcccgaagga agcctttttt caacagatta accgtttcgc ttatgcgtaa accgggtaac
     1201 gtgcgcagat gtcgagaact ttacctttga tgcgctcgat aacggcttca tcattgatgc
     1261 tgtccagcac gtcacacatc cagccagcca gttctttcgc ttctgcttct ttgaagccgc
     1321 gacgcgtaat tgccggagta cccacgcgaa taccggaggt cacaaacggg ctcttcggat
     1381 cgttcggtac gctgtttttg ttgacggtga tgttagcacg tcccagagcg gcgtctgctt
     1441 ctttaccggt caggttttta tcaaccagat caaccaggaa caggtggtta tcagtgccgc
     1501 cggaaaccac tttgtagccg cgctcgagga acacttctac catcgcttta gcgtttttcg
     1561 cgacctgctg ctggtaagtt ttgaactcag gctccatcgc ttctttcaga gcaaccgctt
     1621 taccggcgat tacgtgcatc aacggaccgc cctgaccacc agggaaaacg gcagagttca
     1681 gttttttgta cagctcttcg ctaccacctt tcgccaggat caggccgccg cgcggacccg
     1741 ccagggtttt gtgagtggtg gtagtaacaa cgtgagcatg aggaaccggg ttcgggtaga
     1801 cgccagcagc aaccaggccc gcaacgtgcg ccatatcaac gaacaggtaa gcaccgatgc
     1861 tgtcagcgat ttcacgcatt ttcgcccagt ccaccacgcc ggaatatgca gagaaaccac
     1921 cgataatcat tttcggcttg tgttctttgg cttgtttttc cagatcggcg tagtcgatat
     1981 gaccggtagc atcgataccg taaggaacga tgttgtacag tttaccggag aagttaaccg
     2041 gagaaccgtg agtcaggtga ccgccatgcg ccaggttcat acccagaacg gtatcacctg
     2101 gttccagcag cgcggtgtag accgcaaagt tagcctggga gccggagtgc ggctggacgt
     2161 tagcgtagtc agcgccgaac agttctttcg cacgatcgat cgccagttgt tcaacgatat
     2221 caacatactc gcaaccgccg tagtagcgtt tgcccggata accttcagca tatttgttgg
     2281 tcagctgaga accctgcgcc tgcattacgc gcgggctggt gtagttttcg gaggcgatca
     2341 gttcgatgtg ctcttcctga cgtacttttt cctgctccat agcctgccac agttcggcat
     2401 cataatcggc aatgttcatt tcacgcttta acatccgcat ctcctgactc agctaacaat
     2461 aaaatttttg gcctttatag gcggtcctgt tggacaacgg cgaacagtat aaccgaatca
     2521 ttgtgcgata acaggtcttg acaaaggaat ttacgcaaac gattaccttc aggctacgca
     2581 aggctttgga gaataaagag cttgcaaccg gaaacggatt tcttttcagg tttgtgatgc
     2641 aaatttttca cttcatcaca ttctttctga aaaacaccaa agaaccattt acattgcagg
     2701 gctatttttt ataagatgca tttgagatac atcaattaag atgcaaaaaa aggaagacca
     2761 tatgcttgac gctcaaacca tcgctacagt aaaagccacc atccctttac tggtggaaac
     2821 ggggccaaag ttaaccgccc atttctacga ccgtatgttt actcataacc cagaactcaa
     2881 agaaattttt aacatgagta accagcgtaa tggcgatcaa cgtgaagccc tgtttaacgc
     2941 tattgccgcc tacgccagta atattgaaaa cctgcctgcg ctgctgccag cggtagaaaa
     3001 aatcgcgcag aagcacacca gcttccagat caaaccggaa cagtacaaca tcgtcggtga
     3061 acacctgttg gcaacgctgg acgaaatgtt cagcccgggg caggaagtgc tggacgcgtg
     3121 gggtaaagcc tatggtgtac tggctaatgt atttatcaat cgcgaggcgg aaatctataa
     3181 cgaaaacgcc agcaaagccg gtggttggga aggtactcgc gatttccgca ttgtggctaa
     3241 aacaccgcgc agcgcgctta tcaccagctt cgaactggag ccggtcgacg gtggcgcagt
     3301 ggcagaatac cgtccggggc aatatctcgg cgtctggctg aagccggaag gtttcccgca
     3361 tcaggaaatt cgtcagtact ctttgactcg caaaccggat ggcaaaggct atcgtattgc
     3421 ggtgaaacgc gaagagggtg ggcaggtatc caactggttg cacaatcacg ccaatgttgg
     3481 cgatgtcgtg aaactggtcg ctccggcagg tgatttcttt atggctgtcg cagatgacac
     3541 accagtgacg ttaatctctt ccggtgttgg tcaaacgcca atgctggcaa tgctcgacac
     3601 gctggcaaaa gcaggccaca cagcacaagt gaactggttc catgcggcag aaaatggcga
     3661 tgttcacgcc tttgccgatg aagttaagga actggggcag tcactgccgc gctttaccgc
     3721 gcacacctgg tatcgtcagc cgagcgaagc cgatcgcgct aaaggtcagt ttgatagcga
     3781 aggtctgatg gatttgagca aactggaagg tgcgttcagc gatccgacaa tgcagttcta
     3841 tctctgcggc ccggttggct tcatgcagtt taccgcgaaa cagttagtgg atctgggcgt
     3901 gaagcaggaa aacattcatt acgaatgctt tggcccgcat aaggtgctgt aatttgatgt
     3961 tgccggatgg aaacatccgg caacccttga cgcggtttaa attgccgcgt cgtcctcttc
     4021 accggtacgg atgcgaatga cccgtgccac gtcaaagacg aagattttac cgtcaccgat
     4081 tttgccggtt tgcgccgtgc gaataatggt atcgacacag gtatcgacaa tgtcgtccgg
     4141 tacgacaatc tcaattttca ctttcggcag aaaatccacc atatactccg cgccgcggta
     4201 cagctcggta tggcctttct ggcgaccaaa gcctttcact tcggtcaccg tcatgccggt
     4261 aataccgact tcggccagtg cttcgcggac atcgtccagc ttgaagggtt ttataatcgc
     4321 atcaatcttt ttcatgctat tccttgaaaa ggtcgcctgt cttttgatct gctaaacgta
     4381 acacataacg ccaattcatt ccttgaaatc gtttgcatcc agctcgtgtc gggaaagcag
     4441 tttataaaat tctgtccggt tgcgccccgc cattctcgcc gcgtgggtga cgttgccttt
     4501 ggtaatttgc agcagcttac gcaaatagtt gagttcaaac tgattacgtg cctcaacaaa
     4561 ggttggcagc gccgtgtttt caccctccag cgcctgctct actaatgcat cgctaataac
     4621 cggagatgag gtcagcgcca cgcactgttc aatcacgttg accaactggc gcacattacc
     4681 cggccagcta gcggtcatca ggcgtttcat cgcatcagtg gagaacgcgc ggacaaacgg
     4741 tttatgtcgc tctgccgcct ggcgcaacag gtgatttgcc agaagcggaa tgtcttctgt
     4801 gcgctctgcc agagccggaa ttttcaggct gacaacgttg aggcggtaat agagatcttc
     4861 gcggaattcc ccgcgcgcca tcgcttttgg cagatcacgg tgagtggcag aaataatccg
     4921 cacattgata tcaatatcgc ggttactgcc cagcgggcgc actttacgct cctgcaacac
     4981 gcgcagcagt ttgacctgta acggcgcagg catatcgcca atttcatcga gaaatagcgt
     5041 tccgccttcc gccgcctgga ataaaccttc gcgattgctg acagcgccag taaacgcgcc
     5101 acgcgcatga ccaaacagct ccgactccag caattgctcg ggcaatgcgc cacagttaat
     5161 agcaataaat ggtttgctgt tgcgcgggct ggcgttgtgg atagcctggg cgaaaatctc
     5221 tttcccggtg ccgctctgac cgttaatcaa aacgctgacg tctgattgcg ccaccagccg
     5281 cgcctgttcc agcaaacgca gcatcagcgg gctgcgggtg acaattgcct cgcgccagcg
     5341 ttcatcggtg gctggcgcgg attgctccag cgcatcgtca attgcctgat atagcgcgtc
     5401 tttgtcgaca ggcttggtga ggaaactaaa aacgccctgc tgtgttgcag caacggcatc
     5461 ggggatagaa ccatgcgcag taagaataat tactggcatt cccggctgca ctttctggat
     5521 ttcagcaaat agctgcatac cgtccatttc atccatccgc aggtcgctga taactaaatc
     5581 tactttttcg cgattcagta cccgtaatcc ttcagcgcca ctttccgccg tgaccacact
     5641 gtagccttcg ctggtcaggc gcaggccaag cagtttcagc aatcccggat cgtcatcgac
     5701 caataataaa tgcgcaggtt tatggctcat caggagtgac ctcatgggtg gatggcgcgg
     5761 gcttttcact ctcgtgcggc gtatccggcg agaaatttcc agccggtttg cgggtcgaga
     5821 gctggcgttc aatatcagtc aggttttcca gcttgcgggt ggtgagttcc agttgctgct
     5881 gtagaacgtg atgttgctgg cgcaatgtat ccagctcgct gtcgctggac tgctggagtt
     5941 tactgtaacg ttggcgctct tccgccagtt gcagttgcag cgcctgaccg tcgcgccaga
     6001 gttgatacag tgggcgaacc tgtgccggga tctcggtact taacgcttca atacgcgcga
     6061 ccagctggcg gcgctcatac ggcgtaattt tggcgtcggc gagcaaaatc ccttgtttaa
     6121 aggtattttg ccagctgccg tcgtcatatt ggcgagcttg ctgacgcgac tgcgcaggca
     6181 ttaaacgatc agcacaatcc atcgcccgca gccagtaaag cggattggtt tcggttgatt
     6241 taccttgcag cgcccagatg tcgctacatt cagtagaaag atagtcagcc agttgataaa
     6301 ccggaatttt ttcttctgct ggcgtatcaa tggctggctt attgtgattc tgcacgcaac
     6361 ccagcaatgc cagacatggc agccctgcca gccacagccg tcggggcaat aatcgttgaa
     6421 aaatgtgtcg catattcacc agacttaaag cctatcccag tgggcgtaat tgttgcagac
     6481 agtctggaca tggacagcgc ggagaaaccg gagcgtacat atcgtacgtg aagatttcga
     6541 gcactgcccg gggccgaact gacaaataaa atagcctgat aggataggct gttagcatta
     6601 tttcgtgttt ttcgacgacg gtaattcaat gcggaaacaa acgtcttgcc cgctctcgtc
     6661 gaccagatac agttcccctt gcatacggcg aatacaatcc ctggcaatgc ttaatcccag
     6721 accgctgccc ttcaccgccc cttttcgctg gtggcttccc tgaaaaaagg gttcgaagat
     6781 catggcgcgt tcctcttgcg gaatgggcgt gcctgtattg atgacatcaa tataaacccg
     6841 cgcaccatgt gaactgctgc gaaggcaaat gttaccggat tcagccccgt agtgcaccgc
     6901 attggagtaa agattatcca gtacgctcat cagcagcatt ggctccgcca ggcaagctgt
     6961 tgctttgaga tcgacgtcgg tatgcatcat tttagcccgt gcgggcaggc tatgagcaga
     7021 aaccactgtc tccaccagcg gtgctaattc aacattctcc agttccaccg cactgtccgc
     7081 ctgtttacgg ttgtaatcaa gcagttgttc gatcagtttt tgcaaattgc ggctgctgct
     7141 atcaagaatg ctcaccacct ctttttgctc tggcgtaagc ggcccgacaa cctggtcagc
     7201 cagtaattca gtgccctcgc gcatactcgc cagtggcgtt tttaattcat gagataaatg
     7261 tcttaaaaat tgatggcgtt gggattccag ccatgacagg cgctcactta accaaagaat
     7321 acgttgccca accgagcgta actcgctcgg tccactgaac gaaacgctat tgcccagaga
     7381 acgcccttcc cccagacggt tgatcatgcg ctcgatattt ttcaccggcc cgataatcat
     7441 ccgcgtgaaa agtagcacca tcaccagact caccagaaat agcaccagcg attgccaacc
     7501 aaaatattgc ccacgttcgg cgatttcacg ctgaagttgc tgcccacgag agaacaccac
     7561 tgtgcgcgtg gcctgcacca tttcggtatt ggcactggca aaggcttcaa gacgcgcggc
     7621 ggcggcagca tcgggaccac tgttgttaca ctgaagttgg gccagattgt tcaaatcctg
     7681 acgcaatgcc tggtaaagtt tatcgtctgg cagtacgcct gcgtgggcat cgagcatttc
     7741 gctgtaacgc ttgcgctggc tttgataaac cttcgcaagc gtagggtcgt ccagcacgca
     7801 atactgacgg tagctacgct ccatctccag cgccgcgttg gtcatcgctt cactacgccg
     7861 ggcatcaata agcgtagtgc ggttaaccag cgccgcctga tcgctaagcg cattcaggct
     7921 ttgccaggct tgccatgcca gcaccaacag gggtagtaga attagcaaaa atgccagcat
     7981 taccagttgt cgtaatgagc ggggaaaaac gggccagcgt ttcaaggtgt tactctcgtc
     8041 agacgcgaat agcctgatgc taaccgaggg gaagttcaga tacaacaaag ccgggaatta
     8101 cccggctttg ttatggaata aggcggtgcc taactcgacg tttcgcccga tggttgatat
     8161 agctacgctg atatcagaag ttggacggca ggcaccttgt tgtgcgtcat tcgaatttta
     8221 tgtagcacgt cccgaagggg ctgacataag tcggtgaatg agccactgct tactattatg
     8281 cagtaactgt gccaataaag aaaatagttt ggtaacgtac tgattatacg ttgctttgag
     8341 ggatttatgg cttcttcgct atttgaatgt aaatcagcca ctgtgtcgct aaaaagagac
     8401 aacttaagat aaacttatta gattgcaata aaatcaatca cttaagtgtc gccagaaggc
     8461 gacacggtaa accacccatt gtcgtgattt acagacacaa aaaagctccc ggagttggga
     8521 gcttatgata gtggttggtg cttaatgccg catccgggct gcaaaaccaa tgaactgatg
     8581 aattacccca actgcttacg cgcattgcgg aaaatgcgca tccatgggcc atcctcgccc
     8641 cagttttccg gatgccagga gttgctgaca gtacggaaaa cacgttccgg gtgcggcatc
     8701 ataatggtga ctcgaccact ttcagtcgtg actgccgtaa taccgttcgg tgaaccgttc
     8761 gggttagccg ggtaggtttc agtgactttg ccgaagttat cgacatagcg cagtgccacc
     8821 agccctttgc tttccagtgc cgccagatgc gccgcatcac gcacttccac gcgcccttca
     8881 ccatgagaga cagcaatcgg catttgcgag cccaccatcc cctgcaacag cagagacggg
     8941 ctttgggtta cttcgaccag gctgaaacgc gcttcaaagc gatcggaggt attgcgcaca
     9001 aaacgtggcc acaactcact acctgggatc agttcgcgca ggttagacat catctggcaa
     9061 ccgttacata cccccagcgc cagcgtttgc ggacggtgga agaaggttgc aaactcatcg
     9121 cgtacacggt cattgaacag gattgacttc gcccaacctt caccggcacc cagcacatca
     9181 ccgtaggaga aaccaccgca cgcgaccagg gcgtggaaat cttccaggcc cgtgcgtccg
     9241 gtcagcaggt cactcatatg cacgtcgata gcatcaaagc ctgcacggtg gaaagctgcc
     9301 gccatttcaa catgcgagtt cacgccctgc tcacgcagta cggcaacttt cggacgtgcg
     9361 ccagtggcaa tatacggtgc tgccacatct tcgttgatat cgaacgacag ttttacattc
     9421 aggcccggat cggcgtcgtt agatttcgcc tgatgctcct gatcggcaca ctccgggttg
     9481 tcacgcaggc gctgcatctg ccaggtagtt tctgcccacc agacacgcaa cgtggtgcgg
     9541 ctttcgctga atacagtctg cccgttggcg gtaatcacaa aacggtcacc ggaaaccgcc
     9601 tgccctacat aatggacaca atcagcaagc ccatgctgtg ccagtacgga ctcgaccgct
     9661 tcacggtcag cggcacgaac ctgaatcacc gcacccagtt cttcgttaaa caacgccgcc
     9721 aggcgatcgt cgcccagaga ggcaatatcc gcgttaatgc cgcaatgacc agcaaaggcc
     9781 atttccgcca gcgttaccag caggccgcca tcagagcggt cgtggtatgc gagcagctta
     9841 cgctgtgcaa ccagcgcctg aatcgcgtca tagaagcctt tcagttgcgc gacgtcgcgt
     9901 acatctgccg gtttgtcgcc aagctgacga taaacctgcg ccagcgccgt tgcgcccagc
     9961 gcgttattgc ctttgcccaa atcaatcagc aatagtgcgt tatcttcggt agaaagctgt
    10021 ggcgtgatgg tgtgacgcac atcttccacg cgggcaaatg cagaaatcac cagcgacagc
    10081 ggcgacgtca tttcgcgctc ttcgttacct tcctgccagc gggttttcat cgacatagag
    10141 tctttaccca ccgggatcgt caggcccagc gccggacaaa gctcttcgcc cacggcttta
    10201 acggcttcat acaggcccgc atcttcacca gggtggcctg ccgccgccat ccagttggcg
    10261 gaaagtttaa tgcgtttgat atcgccaatc tgtgttgcgg caatattggt taacgcttca
    10321 ccgaccgcca gacgggcaga ggcggcgaaa tccagcagcg caaccggcgc acgctcgcca
    10381 atcgccatcg cttcaccgta gtagctgtcg aggctggcgg tagtgaccgc gcagttagcg
    10441 accggcacct gccacggacc caccatctga tcgcgcgcta ccatgccagt tacgctgcgg
    10501 tcaccgatgg tcaccaggaa agttttctcc gccacggtcg gcagatgcag tatgcgtttc
    10561 accgcgtctg caatggtgat cccttcacgg accagcgcat cgcccttcgc tttcagcgtt
    10621 tgtacatcgc gggtcatctt cggcgtttta ccaagtagga cgtccagcgg cagatcgatc
    10681 ggctgattat caaaatgacg atcgtgtaga gaaagatgca gttcttcggt cgcttcacca
    10741 atcaccgcgt agggtgcgcg ctcacgctta cacagttcgt caaacagcgg taattgatcg
    10801 gcagcaaccg ccagcacgta gcgttcctgg gattcgttac accagatttc cagcgggctc
    10861 atgcctggct cgtcgctcag aatgtcgcgc agttcaaatt taccgccacg cccgccgtcg
    10921 ctcaccagtt ccggcatagc gttagaaaga ccgcctgcgc caacgtcgtg gataaacagt
    10981 attgggttgg catcaccaag ctgccagcaa cggtcaatca cttcctggca gcgacgctcc
    11041 atctccgggt tgtcgcgctg tacggaagca aagtcgaggt cggcatcaga ctgaccagac
    11101 gccatggaag acgccgcgcc gccgccaaga ccgatgttca ttgccgggcc gccgagaacg
    11161 accagcttcg cgccaacgtt gatctcgcct ttttgtacgt gatcggcgcg aatgttgccg
    11221 atcccgcccg ccagcatgat cggtttgtga taaccgcgca gctcttcgcc gttgtggctg
    11281 ttcacttttt cttcataagt acggaagtag ccgttcagtg ccggacgacc aaattcgttg
    11341 ttaaacgccg caccgcccag cgggccttcg atcatgatgt ccagcgcggt gacaatgcgc
    11401 tcaggcttac cgaaatcttc ttcccacggc tgttcgaagc caagaattcg caggttggaa
    11461 acggagaaac caaccaaacc cgctttcggc ttcgcgccgc gcccggtggc accttcatcg
    11521 cggatttcac cgccggaacc ggtcgccgcg cccggccacg gagaaatcgc cgtcgggtgg
    11581 ttgtgagttt cgactttcat cagaatatgc gccggttcct gatggaaatc atagcggccc
    11641 gtttcgtggt cagcaaagta gcggcccact tcagaacctt ccattacggc ggcgttatct
    11701 ttataagcag agagaacgtg atctggcgtg gtttcgaaag tatttttgat catcctgaac
    11761 agcgatttcg gctgttgttc accgtcgata atccagtcgg cgttaaaaat tttgtggcgg
    11821 cagtgctcag agttcgcctg agcgaacata tacagctcga tgtcgttcgg gttacgacca
    11881 agctttgtga aagcatcctg cagatagtca atttcatctt ccgccagagc caggccaaga
    11941 cgcaggttag cgtcgatcag cgcctgacgg ccctgcccca gcaaatcaac gcttgtgacc
    12001 ggagtcggtt gatggtgggc aaacaactgc tctgcatcat ctaaatcaaa aaagacagtt
    12061 tccatcatgc ggtcgtgcag ttcagcggta acctgctgcc attgttcatt ggtcagcgta
    12121 ccggcttcta tatagtaagc aacgccgcgc tcaaggcggt ttacctgttg tagcccgcag
    12181 ttatgggcaa tatcggtcgc tttcgaagac cagggagaga tggtgccagg acgcggggtc
    12241 accagcagga gtttgccttg cggggcgtgg ctggcgagtg ccggaccata tttcagcagg
    12301 cgttcaagtt gtgcgtgctc atcatcgttt aacggcgcat tgaggtcagc aaaatggaca
    12361 tactcggcgt aaatattgtg aaccgggagc ctggcagcct gaaaacgtgc cagcagtttg
    12421 ttgattcgga atgccgacag tgcaggcgaa ccacgcagaa tttccatcat aagtctctcg
    12481 tcttctaagc tttcggtgta cccaaggggg gaaacgggcg tcattataaa gaatctgatg
    12541 cgctgacgaa accgtttgcg tggaaataaa atcaccatcg tgaattagca acgcgtgccg
    12601 ccaatggctg taataagttg ccatctggcg caggtttacg caaaatgccg ctcatttatg
    12661 agtaaacctt tcactattat tacgtttttt caagctggga cgcgcacgac acagagaatt
    12721 aactaattga aaaaattaaa gattaattat ctgttcatcg gcattctggc actgctgctc
    12781 gcggtcgctc tctggccatc cattccctgg tttggtaaag ccgacaaccg tatcgccgcc
    12841 attcaagcgc ggggagagtt gcgtgtgagc accattcata ctcccctgac ttataacgaa
    12901 atcaacggga aaccttttgg cctggattac gaactggcga aacagtttgc cgattacctc
    12961 ggcgtaaaac tgaaagtgac cgtgcggcag aatatcagcc agctgtttga cgaccttgat
    13021 aatggtaacg ccgacctgct ggcggcagga ctggtctata acagtgagcg ggtaaaaaat
    13081 tatcagcctg gccctaccta ttattccgtg tcacaacaac tggtttataa agtgggtcag
    13141 tatcgcccac gtacgctgtg caacctgacg gcggagcaac tcaccgttgc accgggtcat
    13201 gtggtggtta acgatctcca gaccctgaaa gaaacaaaat tcccggaatt aagctggaag
    13261 gtagacgaca aaaaaggctc tgcggaatta atggaagatg tcatcgaagg aaaactcgat
    13321 tacaccattg ctgattctgt cgccatcagc ctgtttcagc gcgttcaccc ggagctcgcc
    13381 gtagcgctcg atatcaccga tgaacaaccg gtgacttggt ttagcccgtt agatggcgat
    13441 aatacccttt ccgccgccct gctcgacttc ttcaacgaaa tgaatgaaga cggtacgctg
    13501 gcacgcattg aagagaaata cctggggcat ggcgatgatt ttgattacgt cgatacgcgc
    13561 acatttttac gcgccgtcga tgcggtactg ccgcagttaa agcccctgtt tgagaaatac
    13621 gccgaagaaa ttgactggcg tttgctggcc gctattgctt atcaggaatc gcactgggat
    13681 gcacaggcca cttcaccgac gggtgtgcgc ggcatgatga tgttaaccaa aaataccgcg
    13741 caaagcctcg gcattacgga tcgtaccgat gccgaacaga gcatcagcgg tggcgtgcgt
    13801 tatttgcagg atatgatgag taaagtgccg gaaagtgtgc cggagaacga gcggatctgg
    13861 tttgccctcg ctgcgtacaa tatgggctat gcgcatatgc tggatgcccg cgccctgacg
    13921 gcaaaaacca aagggaatcc tgacagttgg gctgacgtaa aacagcgtct gcctttactt
    13981 agccagaaac cctattacag caagctgact tacggctacg ctcgtggaca tgaagcctac
    14041 gcttatgtcg aaaatattcg taagtatcaa attagcctgg tgggttatct gcaagagaaa
    14101 gagaagcagg ctacagaagc ggcgatgcaa ctggcgcagg attatccggc ggtatcggct
    14161 acggagttgg gcaaagagaa atttcctttt ctctcgtttc tttcccagtc gtcatcaaac
    14221 tatttgaccc attctccctc tctgctgttt tccaggaaag ggagtgaaga gaaacaaaat
    14281 taatccgtcg aggattgcgc ttttttctgc gctttaattt cctggcggcg catgcgaaag
    14341 aagtcactga gcaacgccgc gcactcatcc gccagtattc cttccgtaat ttccactcgg
    14401 tgattcatac ccggatgatg cagcacatcc attaaagatc ccgcagcgcc agttttcgcg
    14461 tcacgcgcac caaagaccac gcgaccaatg cgactgtgga tcatcgctcc ggcacacatt
    14521 acacatggtt caagcgtgac atacaacgtg gcgtcgatca gacgataatt ttgcatcacc
    14581 agaccaccct gccgcagggc catgatttct gcatgtgcgg tgggatcatg gcgaccaatc
    14641 gggcggttcc agccttcgcc gattacccga ttgttatgca ctaataccgc gccgaccggc
    14701 acttcccgct catcccaggc acgtttcgcc agcgtcagcg cgtgacgcat ccagtattcg
    14761 tggctaaatt cgacttcaga caaaaagaaa actccggtta taaaagcgcg gcgcattata
    14821 cacggacgct atgctttact ctattccagt tgctggagtt caccgcgcgg ggttactcgc
    14881 caacgatgct gacagaaata aagcagcgga ttgtcctgat tactgtcgct atagccactg
    14941 tacagccgca gcggagtgcc gattttgcgc tccagttgtg cgaccttttc atgtcccaga
    15001 caacgcatcg tcaataccca accaccatag ccacgctgaa tttggctggc gataagatta
    15061 acccgcggca gccagggcgt atcgaaataa accgcttcaa ccagcggctg cggagagccg
    15121 gtaatcaacc agatatcagc atcggaactt aacaggtagg tggttaatcg ctcctgaacc
    15181 agcggaaagg cggtaacatt gtcgcgaaac cagcgcacga aatcggcctg caacgtctgt
    15241 aaacgtgctt cgctgtgacc aaaagtgcac ccccacagaa gcagactcat cggccagcgt
    15301 gccgcacgac cttttatcaa taacgcaatg gctataatcg gtaacaacgg caggacaagt
    15361 aacgcattca gcggttggcg acgtagtaaa tagcgcagaa aactgccgaa catatcctgc
    15421 tgatgcaatg ttccatctaa gtcaaaaaac accacacgac gctcgtgagt tgccaaacca
    15481 tactcctctg gactgaaaca tcctgattaa ttttcgctac tacatagcct aacagataga
    15541 tcatcacttt tccggcaaca atcgaccgca tcatggctaa ctggaatttt taattcatgg
    15601 caattagcgg caatggaata taaaattcac tcgcgtgtgt ctcatattgc ctgttgtcgc
    15661 cactatttca tcgcgaggaa agatatgaac ggcttacttc gtatccgtca gcgttaccag
    15721 gggcttgccc agagtgataa aaaactggcg gattatctgc tgctacaacc tgatacggcg
    15781 cgccatttaa gctctcagca actggccaac gaagccggag tcagtcagtc cagcgtcgtg
    15841 aagttcgcgc aaaaactcgg ctataaaggt tttccggcgc ttaagttggc gttgagtgaa
    15901 gcgctggcaa gccagccgga atcgccctcc gtgcccattc ataaccaaat ccgcggtgat
    15961 gatccgttac ggctggtcgg cgaaaaactg attaaagaaa atactgccgc tatgtacgca
    16021 acgctaaacg ttaatagtga agagaaactg catgaatgcg taacaatgtt gcgctctgcg
    16081 cggcggataa ttctgaccgg tattggcgct tcgggtctgg tggcgcaaaa ctttgcctgg
    16141 aagctgatga agattggctt caatgctgcc gcagtgcgcg atatgcatgc gctactcgca
    16201 acagtacagg cgtcgtcccc tgacgatctg ttattagcca tttcctacac cggtgtacga
    16261 cgcgagttaa acctggcggc agatgagatg ctgcgagtgg gcggaaaagt gctggcgatt
    16321 accggcttta ctccgaatgc cctgcaacag cgtgcttctc attgcctgta taccattgcc
    16381 gaagaacaag cgacaaacag tgcttcaatc tctgcttgtc acgctcaggg aatgttaacg
    16441 gatttgctgt tcattgcgct gattcagcag gatctggaac tggcaccaga acgtattcgt
    16501 catagtgaag cgctggtgaa aaaactggtc tgagtaaaga atgcgcgtat aatgcccgcc
    16561 cggtttgtgt tgttttgaga gtttccttat ggcgttgtta atcactaaaa aatgcatcaa
    16621 ttgtgatatg tgtgaacccg aatgcccgaa tgaggcgatt tcaatgggag atcatatcta
    16681 cgagattaac agcgataagt gtaccgaatg cgtagggcac tacgagacac caacctgcca
    16741 gaaggtgtgc ccgatcccca atactattgt gaaagatccg gcgcatgtcg agacagaaga
    16801 acagttgtgg gataaatttg tgctgatgca ccacgcggat aaaatttaat attctactct
    16861 ggaagtagag tattaattat attactggga agccttaacg ccattatatt tatttaattg
    16921 atgacattag cata
//
LOCUS       DADMHC010000073        16920 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.073, whole genome shotgun sequence.
ACCESSION   DADMHC010000073 DADMHC010000000
VERSION     DADMHC010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16920
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.073"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..939)
                     /gene="dacD"
                     /locus_tag="JNZ57_002036"
     CDS             complement(<1..939)
                     /gene="dacD"
                     /locus_tag="JNZ57_002036"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase DacD"
                     /protein_id="HAY8828262.1"
                     /translation="MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDY
                     TTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVF
                     VGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLH
                     LKDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSGKSLTWNGITQQNRN
                     GLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLR
                     WGQQNFTTVQILHRGKKVGTERIWYGDKENIDLGTEQ"
     gene            1148..2575
                     /gene="sbcB"
                     /locus_tag="JNZ57_002037"
     CDS             1148..2575
                     /gene="sbcB"
                     /locus_tag="JNZ57_002037"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease I"
                     /protein_id="HAY8828263.1"
                     /translation="MMNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIG
                     EPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHSLFTVPKTCILGY
                     NNVRFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDG
                     LPSFRLEHLTKANGIEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLM
                     ALIDVPQMKPLVHVSGMFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDS
                     DTLRERLYTAKADLGDNAAVPVKLVHINKCPVLAQANTLRPEDADRLGINRQHCLDNL
                     KILRENPQVREKVVAIFAEAEPFMPSDNVDAQLYNGFFSDADRAAMKIVLETEPRNLP
                     ALDITFVDKRIEKLLFNYRARNFPGTLDYAEQQRWLEHRRQVFTPEFLQGYADELQML
                     VQQYADDKEKVALLKALWQYAEEIV"
     gene            complement(2618..2845)
                     /locus_tag="JNZ57_002038"
     CDS             complement(2618..2845)
                     /locus_tag="JNZ57_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HAY8828264.1"
                     /translation="MAIKKLDVVTQVCPFPLIEAKAALAEMASGDELVIEFDCTQATE
                     AIPQWAAEEGHAITDYQQIGDAAWSITVQKA"
     gene            complement(2859..3788)
                     /locus_tag="JNZ57_002039"
     CDS             complement(2859..3788)
                     /locus_tag="JNZ57_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000275009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HAY8828265.1"
                     /translation="MVLCWDLSCSVGVFALIQAGLLTYEAGAFPWLGTVIGGYIFGLG
                     IVLAGGCATGTWYRAGEGLIGSWIALFTYMVMSAVMRSPHASGLNQTLQHYSTEHNSI
                     AETFNLSVWPLVTVLLVITLWVVMKELKKPKLKVATLPPRRTGIAHILFEKRWHPFVT
                     AVLIGLIALLAWPLSEATGRMFGLGITSPTANILQFLVAGDVKYINWGVFLVLGIFVG
                     SFIAAKASREFRVRAADAQTTVRSGLGGVLMGFGASIAGGCSIGNGLVMTAMMTWQGW
                     IGLVFMILGVWTASWLVYVRPQRKARLATAAAN"
     gene            complement(3998..5356)
                     /gene="plaP"
                     /locus_tag="JNZ57_002040"
     CDS             complement(3998..5356)
                     /gene="plaP"
                     /locus_tag="JNZ57_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416518.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine/proton symporter PlaP"
                     /protein_id="HAY8828266.1"
                     /translation="MSHNVTPNTSRVELRKTLTLVPVVMMGLAYMQPMTLFDTFGIVS
                     GLTDGHVPTAYAFALIAILFTALSYGKLVRRYPSAGSAYTYAQKSISPTVGFMVGWSS
                     LLDYLFAPMINILLAKIYFEALVPSIPSWMFVVALVAFMTAFNLRSLKSVANFNTVIV
                     VLQVVLIAVILGMVVYGVFEGEGAGTLASTRPFWSGDAHVIPMITGATILCFSFTGFD
                     GISNLSEETKDAERVIPRAIFLTALIGGMIFIFATYFLQLYFPDISRFKDPDASQPEI
                     MLYVAGKAFQVGALIFSTITVLASGMAAHAGVARLMYVMGRDGVFPKSFFGYVHPKWR
                     TPAMNIILVGAIALLAINFDLVMATALINFGALVAFTFVNLSVISQFWIREKRNKTLK
                     DHFQYLFLPMCGALTVGALWVNLEESSMVLGLIWAAIGLIYLACVTKSFRNPVPQYED
                     VA"
     gene            complement(5346..5408)
                     /gene="yoeI"
                     /locus_tag="JNZ57_002041"
     CDS             complement(5346..5408)
                     /gene="yoeI"
                     /locus_tag="JNZ57_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein YoeI"
                     /protein_id="HAY8828267.1"
                     /translation="MGQFFAYATVITVKENDHVA"
     gene            complement(5623..6552)
                     /locus_tag="JNZ57_002042"
     CDS             complement(5623..6552)
                     /locus_tag="JNZ57_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416519.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8828268.1"
                     /translation="MKPLLDVLMILDALEKEGSFVAASAKLYKTPSALSYTVHKLESD
                     LNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDT
                     FPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFG
                     FSRLGDLEQVFAVAPHHPLALEEEPLNRRIIKRYRAIVVGDTAQAGASTASQLLDEQE
                     AITVFDFKTKLELQISGLGCGYLPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQ
                     TAGLASGWWRDEILANSAIAGVYAKSDDGKSAI"
     gene            complement(6598..7422)
                     /locus_tag="JNZ57_002043"
     CDS             complement(6598..7422)
                     /locus_tag="JNZ57_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY8828269.1"
                     /translation="MKKVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSG
                     IDSYLLRMEPELVCDSDDLDALMDADALVITLPARRSGSGDEFYLQAVQELVDSALAH
                     RIPRIIFTSSTSVYGDAQGMLKETTPRNPVTNSGRVLEELEDWLHNLPGTSVDILRLA
                     GLVGPGRHPGRFFAGKTAPDGEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHP
                     ARNVFYPQMARLLGLEPPQFRNSLDSGKGKIIDGSRICNELGFEYQYPDPLVMPLE"
     gene            complement(7505..7759)
                     /gene="yoeB"
                     /locus_tag="JNZ57_002044"
     CDS             complement(7505..7759)
                     /gene="yoeB"
                     /locus_tag="JNZ57_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin YoeB"
                     /protein_id="HAY8828270.1"
                     /translation="MKLIWSEESWDDYLYWQETDKRIVKKINELIKDTRRTPFEGKGK
                     PEPLKHNLSGFWSRRITEEHRLVYAVTDDSLLIAACRYHY"
     gene            complement(7756..8007)
                     /gene="yefM"
                     /locus_tag="JNZ57_002045"
     CDS             complement(7756..8007)
                     /gene="yefM"
                     /locus_tag="JNZ57_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoeB-YefM toxin-antitoxin system antitoxin YefM"
                     /protein_id="HAY8828271.1"
                     /translation="MRTISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEE
                     YNSLEETAYLLRSPANARRLMDSIDSLKSGKGTEKDIIE"
     gene            8290..8340
                     /gene="hisL"
                     /locus_tag="JNZ57_002046"
     CDS             8290..8340
                     /gene="hisL"
                     /locus_tag="JNZ57_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="his operon leader peptide"
                     /protein_id="HAY8828272.1"
                     /translation="MTRVQFKHHHHHHHPD"
     gene            8486..9385
                     /gene="hisG"
                     /locus_tag="JNZ57_002047"
     CDS             8486..9385
                     /gene="hisG"
                     /locus_tag="JNZ57_002047"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HAY8828273.1"
                     /translation="MTDNTRLRIAMQKSGRLSDDSRELLARCGIKINLHTQRLIAMAE
                     NMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFG
                     GCRLSLATPVDEAWDGPLSLNGKRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVAPR
                     AGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMEESKQQLIDKLLTRIQ
                     GVIQARESKYIMMHAPTERLDEVIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWE
                     TMEKLKALGASSILVLPIEKMME"
     gene            9391..10695
                     /gene="hisD"
                     /locus_tag="JNZ57_002048"
     CDS             9391..10695
                     /gene="hisD"
                     /locus_tag="JNZ57_002048"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HAY8828274.1"
                     /translation="MSFNTIIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVK
                     AHGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQ
                     KLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLC
                     SPPPIADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAK
                     RQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPAAD
                     MARRVAEAVERQLAELPRAETARQALNASRLIVTKDLAQCVEISNQYGPEHLIIQTRN
                     ARELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTV
                     QELSKEGFSALASTIETLAAAERLTAHKNAVTLRVNALKEQA"
     gene            10692..11762
                     /gene="hisC"
                     /locus_tag="JNZ57_002049"
     CDS             10692..11762
                     /gene="hisC"
                     /locus_tag="JNZ57_002049"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HAY8828275.1"
                     /translation="MSTVTITDLARENVRNLTPYQSARRLGGNGDVWLNANEYPTAVE
                     FQLTQQTLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDS
                     ILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTG
                     QLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFAL
                     AGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAER
                     EYLIAALKEIPCVEQVFDSETNYILARFKASSAVFKSLWDQGIILRDQNKQPSLSGCL
                     RITVGTREESQRVIDALRAEQV"
     gene            11762..12829
                     /gene="hisB"
                     /locus_tag="JNZ57_002050"
     CDS             11762..12829
                     /gene="hisB"
                     /locus_tag="JNZ57_002050"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HAY8828276.1"
                     /translation="MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQ
                     KAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECD
                     CRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGE
                     QLTKRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEV
                     NVKGDLYIDDHHTVEDTGLALGEALKIALGDKRGICRFGFVLPMDECLARCALDISGR
                     PHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFG
                     RTLRQAIRVEGDTLPSSKGVL"
     gene            12829..13419
                     /gene="hisH"
                     /locus_tag="JNZ57_002051"
     CDS             12829..13419
                     /gene="hisH"
                     /locus_tag="JNZ57_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HAY8828277.1"
                     /translation="MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDVVLLADKLFL
                     PGVGTAQAAMDQVRERELFDLIKACTQPVLGICLGMQLLGRRSEESNGVDLLGIIDED
                     VPKMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAYFYFVHSYAMPVNSWTIAQCNYG
                     EPFTAAVQKDNFYGVQFHPERSGAAGAKLLKNFLEM"
     gene            13419..14156
                     /gene="hisA"
                     /locus_tag="JNZ57_002052"
     CDS             13419..14156
                     /gene="hisA"
                     /locus_tag="JNZ57_002052"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310852.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HAY8828278.1"
                     /translation="MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAE
                     VLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVG
                     STAVKSPEMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETY
                     LPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDINDVAALRGTG
                     VRGVIVGRALLEGKFTVKEAIACWQNA"
     gene            14138..14914
                     /gene="hisF"
                     /locus_tag="JNZ57_002053"
     CDS             14138..14914
                     /gene="hisF"
                     /locus_tag="JNZ57_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015853929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HAY8828279.1"
                     /translation="MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGA
                     DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLDDAAKILSFGADKISI
                     NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL
                     EWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE
                     AFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRIC"
     gene            14908..15519
                     /locus_tag="JNZ57_002054"
     CDS             14908..15519
                     /locus_tag="JNZ57_002054"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HAY8828280.1"
                     /translation="MLTEQQCRELDWEKTDGLMPVIVQHAVSGKVLMLGYMNPEALDK
                     TIESGKVTFFSRTKQRLWTKGETSGNFLNVVSIAPDCDNDTLLVLANPIGPTCHKGTS
                     SCFGDTAHQWLFLYQLEQLLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALA
                     ATVHDRFELTNEASDLMYHLLVLLQDQDLDLTTVIENLRKRHQ"
     gene            complement(15691..16677)
                     /gene="wzzB"
                     /locus_tag="JNZ57_002055"
     CDS             complement(15691..16677)
                     /gene="wzzB"
                     /locus_tag="JNZ57_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS O-antigen chain length determinant protein
                     WzzB"
                     /protein_id="HAY8828281.1"
                     /translation="MRVENNNVSGQNHDPEQIDLIDLIDLLVQLWRGKMTIIISVIVA
                     IALAIGYLAVAKEKWTSTAIVTQPDVGQIAGYTNAMNVIYGSAVPKVSDIQASLIGRY
                     STAFSALAETLDNQEEAEKLTIEPTVKNQSLPLAVSYVGETPEGAQKQLAKYIQQVDD
                     QVNEELEKDLKDNIALRMKNLQDSLKTQEVVAQEQKDLRIRQIQEALQYANQAQVTKP
                     QVQQTEDVTQDTLFLLGSEALESMIKHEATRPLVFSPNYYQTRQNLLDIESLKVDDLD
                     IHAYRYVMKPMLPIRRDSPKKAITLILAVLLGGMVGAGIVLGRNALRNYNAK"
     gene            complement(16824..>16920)
                     /locus_tag="JNZ57_002056"
     CDS             complement(16824..>16920)
                     /locus_tag="JNZ57_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-glucose 6-dehydrogenase"
                     /protein_id="HAY8828282.1"
                     /translation="QQADVIISNRMAEELKDVADKVYTRDLFGSD"
BASE COUNT         4309 a         4440 c         4243 g         3928 t
ORIGIN      
        1 ttgttccgtt cccaggtcga tattttcttt atcgccatac cagatgcgtt ccgttccgac
       61 ctttttccca cggtgcaaaa tttgcaccgt agtaaagttt tgttgccccc aacgcagtaa
      121 ttttcttgcc tcttcctcac gaccttttgc actgtcagcc cccattacca ctgcaatgag
      181 acgacgctgc ccatctacag ccgaagcaat gagattaaac ccggcaccag aagtatgacc
      241 cgttttcagg ccgtcaacat tcatggtttt atcccacaac aacccgttac ggttttgctg
      301 ggtgataccg ttccaggtga gacttttccc actgtacata tgataaaact cgggctcgcc
      361 gtggatgata gcacgagaaa gcacagctaa atcataagcc gagctatgct ggccaggtgc
      421 atccagacca tgcactgttt caaaatgcgt atccttgaga tgcagcttct cggcatagtt
      481 gttcatcatt tcaacaaact gccgttgccc accggcaata tagtcagcca gagcaacaca
      541 agcgtcattt ccggaatcca caattaaacc acggcttaaa tcacgtaccg atacgcgatc
      601 gccctctttc aaaaacatca gtgaagaacc gacaaacacc ggattatctt tcgcccacgc
      661 atcgcgcccc acggtgacaa tatcgtctgg cgtaatgcga tgactatcga tagcgcgatc
      721 cacgacataa cccgtcatca gctttgtcag gctggcggga ttgcgctgtt gatgctcatt
      781 acccgcggtg aggatctgac cggtggtgta atccatcaat acccaggacc cggcatgaat
      841 ctctggaggc tgaggtgaaa aaggaatgtt ttccgccgca aaaccagacg ataagttaaa
      901 aacgaacaaa gaagcagcaa taataagacg gcgtttcaac agcaaaccct caggagtttc
      961 aaatagctgt tctttttacg gaaatactta tgaactggct ggaataaagt gcaagaaaat
     1021 gtgactaccc tctcattttt atctgacatg atctgttgcc actcgctgcc aaattgtggc
     1081 gctaaagctg attagcacgg tgatatttga tactctggca gacagcagaa ataacggatt
     1141 taacctaatg atgaatgacg gtaagcaaca atctaccttt ttgtttcacg attacgaaac
     1201 ctttggcacg caccccgcgt tagatcgccc tgcacagttc gcagccattc gcaccgatag
     1261 cgaattcaat gtcatcggcg aacccgaagt cttttactgc aagcccgctg atgactattt
     1321 accccagcca ggagccgtat taattaccgg tattaccccg caggaagcac gggcgaaagg
     1381 agaaaacgaa gccgcgtttg ccgcccgtat tcactcgctt tttaccgtac cgaagacctg
     1441 tattctgggc tacaacaatg tgcgtttcga cgacgaagtc acacgcaaca ttttttatcg
     1501 taatttctac gatccttacg cctggagctg gcagcatgat aactcgcgct gggatttact
     1561 ggatgttatg cgtgcctgtt atgccctgcg cccggaagga ataaactggc ctgaaaatga
     1621 tgacggtcta ccgagctttc gccttgagca tttaaccaaa gcgaatggta ttgaacatag
     1681 caacgcccac gatgcgatgg ctgatgtgta cgccactatt gcgatggcga aactggtaaa
     1741 aacgcgtcag ccacgtctgt ttgattatct ctttacccat cgtaataaac acaaactgat
     1801 ggcgttgatt gatgttccgc agatgaaacc cctggttcac gtttccggaa tgtttggggc
     1861 atggcgcggc aataccagct gggtggcacc gctggcgtgg catccagaaa atcgcaatgc
     1921 cgtaattatg gtggatttgg caggagacat ttcgccatta ctggaactgg atagcgacac
     1981 attgcgcgag cgtttatata ctgcaaaagc cgatcttggc gataacgccg ccgttccggt
     2041 taagctggtg catatcaata aatgtccggt gctggcccag gcgaatacgc tacgcccgga
     2101 agatgccgac cgactgggaa ttaatcgtca gcattgcctc gataacctga aaattctgcg
     2161 tgaaaatccg caagtgcgcg aaaaagtggt ggcgatattc gcggaagccg aaccgtttat
     2221 gccttcagat aacgtggatg cacagcttta taacggcttt ttcagtgacg cagatcgtgc
     2281 agcaatgaaa attgtgctgg aaaccgagcc gcgtaattta ccggcactgg atatcacttt
     2341 tgttgataaa cggattgaaa agctgttgtt caattatcgg gcacgcaact tcccggggac
     2401 gctggattat gccgagcagc aacgctggct ggagcaccgc cgccaggtat tcacgccaga
     2461 gtttttgcag ggttatgctg atgaattgca gatgctggta caacaatatg ccgatgacaa
     2521 agagaaagtg gcgctgttaa aagcactttg gcagtacgcg gaagagatcg tctaatttga
     2581 agcctccgcc gctggtacgg cggaggacaa tgttgagtca ggctttttga acggtgatgc
     2641 tccacgctgc atcgccaatc tgctgataat cggtgatggc atgtccttct tctgccgccc
     2701 actgtgggat tgcttcagtt gcctgggtgc aatcaaactc aattaccaac tcatcgccgc
     2761 tggccatttc tgccagtgct gcttttgctt ctatgagtgg aaacggacag acctgcgtca
     2821 ccacatccag ctttttaatc gccatcttta caccttactt aatttgccgc agcagtcgcc
     2881 agtcgtgcct tacgctgtgg tcgtacatac acaagccagg acgcagtcca gactccgaga
     2941 atcataaata caaggccaat ccagccctgc caggtcatca ttgcagtcat gaccagtcca
     3001 ttaccgatag agcaaccacc tgcaatgctg gcaccgaagc ccataagcac accacctaac
     3061 ccgctacgta ctgttgtttg tgcatcagct gcgcgaacgc ggaactcacg gctcgctttg
     3121 gctgcaataa atgaccccac gaagatccct aacaccagga aaacgcccca gttaatgtat
     3181 ttcacgtcac ctgcgaccag aaattgcaga atattggccg ttggggaagt gattcctaac
     3241 ccaaacatgc gtccggttgc ttcactcagg ggccaggcta aaagcgcaat caaaccgatg
     3301 agtacagcag tgacaaaggg atgccagcgt ttttcaaaca gaatatgagc gatcccggtt
     3361 cggcgcggcg gtaaggtcgc gactttgagt tttggcttct tcaactcttt catcaccacc
     3421 cagagcgtta tcaccagcaa aacggtaacc aacggccaca cagacaaatt aaaagtctca
     3481 gcaatagagt tatgttcagt actgtagtgc tgcaaggttt gatttaaacc actggcatgt
     3541 ggagaacgca tcaccgcact catcaccata taagtgaaaa gcgcgatcca actgccgatc
     3601 aatccctcac ccgcgcgata ccaggtcccg gtggcacatc cacccgccag aacaattccc
     3661 agcccgaaga tatacccacc tataacagta ccaagccacg ggaacgcccc ggcttcgtaa
     3721 gtcagtaggc ccgcctgaat taacgcaaaa acccccacgc tgcatgacaa atcccagcag
     3781 agcaccacaa attagcccgc ttaatatcat tgaaaacata aattaattaa ccagatgaat
     3841 gttaataggg aaattattca tgactggtgg aatgcagacc aataaccaaa ttctctaaat
     3901 tagaacaaat ggttattaat gaggatttcg ataaaaaaga ataaaaaaac cggagccaaa
     3961 taatcattcg actccggttt gttattagaa aagatgatta tgcaacgtct tcgtactgcg
     4021 gaaccgggtt acggaagctc ttggtgacgc aagccaggta aatcagaccg atagccgccc
     4081 agatcagacc cagaaccatt gagctttctt ccaggttaac ccacagcgca ccaacggtca
     4141 gcgcaccaca catcggcagg aacagatact ggaagtgatc tttcagcgtc ttgttacgct
     4201 tctcacggat ccagaactgc gagataaccg acaggttaac gaaggtgaac gccaccaacg
     4261 caccaaagtt aatcagcgcc gtagccatta ccaggtcgaa gttgattgcc agcagggcaa
     4321 tcgcgccaac caggatgatg ttcatcgccg gagtacgcca tttcgggtgt acataaccga
     4381 agaagctttt cgggaatacg ccgtcacgcc ccattacgta catcagacgc gcaacacctg
     4441 cgtgcgccgc cataccggac gccagtacgg taatggtgga gaagatcagc gcaccaacct
     4501 ggaatgcttt acctgccacg tacagcatga tttcaggctg tgacgcatcc ggatctttaa
     4561 agcgagagat atccgggaag tacagctgca ggaagtaagt tgcaaagatg aagatcatgc
     4621 cgccaatcag cgcggtcagg aaaatcgcac gcgggatcac gcgctctgca tctttggttt
     4681 cttccgacag gttgctgatg ccgtcaaagc cggtaaagga gaagcacagg attgtcgccc
     4741 cggtaatcat cgggataaca tgcgcatcgc cagaccagaa cggacgagtg ctcgccagcg
     4801 taccagcgcc ttcaccttca aatacgccat aaacaaccat gcccagaatc accgcgatca
     4861 gcactacctg caacacgacg attacagtgt tgaagttcgc tacggatttc agactacgca
     4921 ggttaaaggc ggtcataaag gccaccagcg ccaccacaaa catccacgat gggatggaag
     4981 gcaccagagc ttcaaaataa attttcgcca gcagaatgtt gatcatcggc gcgaacagat
     5041 agtcgagcag agaagaccaa cccaccataa agccgacagt cgggctaatg gatttctggg
     5101 cgtaagtgta tgcagagcca gcagaaggat agcggcgaac cagcttcccg tagctcagag
     5161 ccgtaaacag gatcgcaatc aatgcgaacg cataggctgt cggcacatga ccatccgtga
     5221 ggcctgaaac gataccaaaa gtatcaaaca gcgtcatcgg ctgcatatag gcaagaccca
     5281 tcattacaac cggaactaac gtaagcgttt tacgcaattc cacgcgagag gtgtttggag
     5341 taacgttatg cgacatggtc attctccttt acggtgataa ccgtcgcgta agcaaaaaat
     5401 tgccccattt ttttggattc ctcagcgaca acaactgtcg atttttagta aatatctatc
     5461 cggtacgaag cccggcctct tggtatgaat gattggtttg aagcaaaaaa taaccgacgc
     5521 tgatgaaacg tcggttttta gtcatttttt gacagcggcg cattgtgcct aaatgggggg
     5581 gaaatgacaa gagaatgaga ggcttgtcat aataattttt ctttaaatgg ctgattttcc
     5641 gtcatcagat tttgcataaa caccggcgat cgcactattt gctaaaattt catctcgcca
     5701 ccagccgctg gcaaggcctg cggtctgttc gttccagcca atccagacgg gttcaaagag
     5761 agtttgggcg accactttct tctcgattaa cgcgccacta tcgagaaaac gttgcgccag
     5821 ataacggggt aaatagccgc agccgaggcc gctaatttgc agctccagtt tggttttaaa
     5881 atcgaaaacg gtaatggctt cttgttcgtc gagaagttgt gaggccgtag aagcgcctgc
     5941 ctgcgcagta tcccccacca caatcgcccg atatcgctta ataatacgac gatttaacgg
     6001 ctcttcttcc agggctaacg gatgatgagg cgcgacggca aagacttgtt ccagatcgcc
     6061 caaccgtgaa aaaccaaact cactggaaga tggtggctca tgcatcgcgc caacaataat
     6121 atccgctcgc ccctgagtca gggcatccca tgaaccaccg agtacgccat tgataaactt
     6181 caggcgcgtc acgctatgat gttgataaaa agcttcaatc agtggcgcaa gcagagaaaa
     6241 aggaaacgtg tcgtccacgc caatcaccag ctcgttttcc cagccttcat gcagtttgat
     6301 cgcctgcttt tccagttccc gcacggtatg cagaacttcc cgccctttct ctaataacat
     6361 ttttccggtg cgggtgaatt tagcgcggtg accgctacga tcaagcaatt gaatattaag
     6421 gtcgctttcc agcttgtgaa cggtgtaact cagagcggac ggcgtcttgt agagtttggc
     6481 cgacgccgcc acaaaactgc cttctttttc taaggcatcg aggatcatca acacatccag
     6541 cagtggtttc atacacgccc ccttgcagtg tatgcggcgt cctgctggcg tgatcgttta
     6601 ctccagcggc attaccagcg gatcgggata ctggtattca aatcccagtt cattacaaat
     6661 ccgactgcca tcaataatct tacctttgcc gctgtccaga ctatttctga actgcggagg
     6721 ttccagcccc agtaaacggg ccatctgcgg atagaaaaca ttacgcgcag ggtgagctgg
     6781 cgcacatata ttatagatgt gtccgccttt aggtgcctgt aacaacagag tgatagcgcc
     6841 aataacatct tctaaatgga ctaaattaac accatgttca ccatcaggcg cggtttttcc
     6901 ggcaaagaag cgtccgggat gacgccccgg tccgaccagg cccgcaagac gcagaatatc
     6961 gaccgaagta ccgggtaaat tgtgcaacca gtcttcgagt tcttctaata ctcgtccact
     7021 gttggttacc ggattacgcg gggtagtttc tttcaacatg ccttgcgcat cgccatagac
     7081 agatgttgag ctggtaaaaa taattcgggg aatacgatgg gccagcgcgc tatccactaa
     7141 ctcttgtacc gcttgtaaat agaactcatc gccggagccg ctacgacgtg ccggaagcgt
     7201 aatgaccagt gcatcggcat ccatcagggc atccagatcg tcagaatcgc aaactaactc
     7261 aggctccatg cgaagcagat agctatcaat gccactcatt cgggccgctt cgacaccatc
     7321 ttgtgtggtt ttactcccgg tgacttgcca gcctcgcgct gaaagtgaca tcgccagcgg
     7381 catgcctaac caccctaacc cgacaattgc gacctttttc atccgttatc tcctgataca
     7441 ccttagatct ataaggctac gctagcgtat caaaactgac aattcattct atgaatgaat
     7501 ctgttcaata atgataacga catgctgcaa tgagcagtga atcgtcggta accgcgtata
     7561 ccagacggtg ctcctctgta atgcgtcggg accagaaacc tgacaaatta tgtttcaggg
     7621 gttctggctt ccccttacct tcaaatggcg ttctgcgggt atctttgata agttcattga
     7681 tctttttaac aattcgctta tctgtttcct gccagtacag ataatcatcc catgattcct
     7741 cagaccagat tagtttcact caataatgtc cttttctgtt cctttgcctg atttcaggct
     7801 atcgattgag tccatcaatc tccgggcgtt agcgggggaa cgcagtagat aagccgtctc
     7861 ttccagcgag ttgtattctt cgagtgacat cagaacacaa gcctctccat tctgacgagt
     7921 aataaggata ggggcatgat cttcaacggc tttcatcatt gttgccgaca aattctgacg
     7981 cgcttcgctg tagctaattg tacgcatgtc aatctcctct tttgtacagt tcattgtaca
     8041 atgatgggcg ttaattaact atttattaat tagtttgtag atcaaggtat tgtcagtgag
     8101 acgaaaatcc aggcttcgct atttttggtg ccgtcagctt agaggacagt cctcttagcc
     8161 ccctcctttc cccgctcatt cattaaacaa atccatcgcc ataaaatata taaaaaagcc
     8221 cttgctttct aacgtgaaag tggtttaggt taaaagacat cagttgaata aacattcaca
     8281 gagactttta tgacacgcgt tcaatttaaa caccaccatc atcaccatca tcctgactag
     8341 tctttcaggc gatgtgtgct ggaagacatt cagatcttcc agtggtgcat gaacgcatga
     8401 gaaagccccc ggaagatcac cttccggggg cttttttatt gcgcggttga taacggttca
     8461 gacaggttta aagaggaata agaaaatgac agacaacact cgtttacgca tagctatgca
     8521 gaaatccggc cgtttaagtg atgactcacg cgaattgctg gcgcgctgtg gcattaaaat
     8581 caatcttcac acccagcgcc tgatcgcgat ggcagaaaac atgccgattg atattctgcg
     8641 cgtgcgtgac gacgacattc ccggtctggt aatggacggc gtggttgatc tcgggattat
     8701 cggcgaaaac gtgctggaag aagagctgct taaccgccgc gcccagggtg aagatccacg
     8761 ctactttacc ctgcgtcgtc tggatttcgg cggctgccga ctttcactgg caacgccggt
     8821 tgatgaagcc tgggatggcc cgctctcctt aaacggtaaa cgtatcgcca cctcttatcc
     8881 tcacctgctc aagcgttatc tcgaccagaa aggtatctct tttaaatcct gcttactgaa
     8941 cggttctgtt gaagtcgccc cgcgtgccgg actggcggat gcgatttgcg atctggtttc
     9001 caccggtgcc acgctggaag ctaacggcct gcgcgaagtc gaagttatct atcgctcgaa
     9061 agcctgcctg atacaacgcg atggcgaaat ggaagaatcc aaacagcaac tgatcgacaa
     9121 actgctgacc cgtattcagg gtgttatcca ggcgcgtgaa tcaaaataca tcatgatgca
     9181 cgcaccgacc gaacgtctgg atgaagtcat cgccctgctg ccaggtgccg aacgcccaac
     9241 tattctaccg ctggcgggtg atcaacagcg cgtagcgatg cacatggtca gtagcgaaac
     9301 cctgttctgg gaaacgatgg aaaaactgaa agcgctgggt gccagttcaa tcctggtcct
     9361 gccgattgag aagatgatgg agtgatcgcc atgagcttta acacaatcat tgactggaat
     9421 agctgtactg cggagcaaca acgccagctg ttaatgcgcc cggcgatctc cgcttctgaa
     9481 agcattaccc gcactgttaa cgatattctc gataacgtga aagcacacgg cgatgaggcc
     9541 ctgcgggaat acagcgcgaa gtttgataaa accacggtta ccgcactgaa ggtgtctgct
     9601 gaggaaattg ccgccgccag cgaacgcctg agcgacgagc taaaacaggc gatggcggtg
     9661 gcagtgaaga atattgaaac cttccacact gcgcaaaaac tgccgccggt agatgtagaa
     9721 acgcagccag gcgtgcgttg ccagcaggtc acgcgcccag tcgcttcagt tgggttgtat
     9781 attcctggcg gctccgcccc gctcttctca acggtattaa tgctggcgac tccggcgagt
     9841 attgcgggct gtaaaaaagt ggtgctgtgc tcaccgccgc cgattgccga tgagatcctt
     9901 tatgcggcgc agctgtgcgg tgtgcaggac gtgtttaacg tcggcggcgc acaggccatt
     9961 gccgcactgg cgtttggtac ggaatctgtg ccaaaagtgg acaaaatctt cgggccgggt
    10021 aacgcctttg tcaccgaagc gaaacgtcag gtgagccagc gtctggacgg tgcggcgatc
    10081 gatatgcccg caggcccgtc ggaagtgctg gtgattgctg acagcggcgc tacgccggat
    10141 ttcgtggctt ctgatttgct ctctcaggct gaacacggcc cggactcaca ggtgatttta
    10201 ctgacgcccg ctgctgatat ggcgcgtcgc gttgccgagg ccgtcgaacg ccagttggca
    10261 gaactgccgc gtgccgaaac cgcccgccag gcactgaacg ccagccgcct gatcgtgact
    10321 aaagatttag cgcagtgcgt ggagatctcc aaccagtacg gcccggagca cctgatcatt
    10381 cagacccgca acgcccgtga actggtcgat agcatcacca gcgccggttc ggtatttctt
    10441 ggtgactggt caccggaatc ggcaggtgat tacgcctccg gcaccaacca cgttctaccg
    10501 acttacggtt acaccgccac ctgttccagc ctcgggctgg cagatttcca gaagcgcatg
    10561 accgtacagg aactgtcgaa agaggggttc tccgcgctgg cttcaaccat agaaacactg
    10621 gccgccgccg agcgcctgac cgcccacaaa aatgccgtta ctttgcgtgt taacgccctt
    10681 aaggagcaag catgagcacc gtgactatta ccgatttagc gcgtgaaaac gtccgcaacc
    10741 tgacgccgta tcagtcggcg cgtcgtctgg gcggtaatgg cgacgtctgg ctgaacgcca
    10801 acgaatatcc cacagccgtg gagtttcagc ttactcagca aacgctcaac cgctacccgg
    10861 aatgtcagcc gaaagcggtg attgaaaatt acgcgcaata tgcaggcgta aaaccggaac
    10921 aggtgctggt cagccgtggc gcggacgaag gtattgaact gctgatccgc gctttttgcg
    10981 aaccgggtaa agactccatc ctctactgcc caccaacgta cggcatgtac agcgtcagcg
    11041 ccgaaacgat tggcgtcgag tgccgcacag tgccgacgct ggacaactgg caactggact
    11101 tacagggcat ttccgacaag ctggacggcg taaaagtggt ctatgtttgc agccccaaca
    11161 acccgaccgg gcaactgatc aatccgcagg attttcgcac cctgctggag ttaacccgcg
    11221 gtaaggcgat tgtggttgcc gatgaagcct atatagagtt ttgcccgcag gcatcgctgg
    11281 ctggctggct ggcggaatat ccgcacctgg ctattttgcg cacactgtcg aaagcttttg
    11341 ctctggcggg ccttcgttgc gggtttacgc tggcaaacga agaagtcatc aacctgctga
    11401 tgaaagtgat cgccccctac ccgctctcga cgccggttgc cgacattgcg gcccaggcgt
    11461 taagcccgca gggaatcgtc gccatgcgcg aacgggtagc gcaaattatt gcagaacgcg
    11521 aatacctgat tgccgcactg aaagagatcc cctgcgtgga gcaggttttt gactctgaaa
    11581 ccaactacat tctggcgcgc tttaaagcct ccagtgcagt gtttaaatct ttgtgggatc
    11641 agggcattat cttacgtgat cagaataaac aaccctcttt aagcggctgc ctgcgaatta
    11701 ccgtcggaac ccgtgaagaa agccagcgcg tcattgacgc cttacgtgcg gagcaagttt
    11761 gatgagtcag aagtatcttt ttatcgatcg cgatggaacc ctgattagcg aaccgccgag
    11821 tgattttcag gtggaccgtt ttgataaact cgcctttgaa ccgggcgtga tcccggaact
    11881 gctgaagctg caaaaagcgg gctacaagct ggtgatgatc actaatcagg atggtctggg
    11941 aacacaaagt ttcccacagg cggatttcga tggcccgcac aacctgatga tgcagatctt
    12001 cacctcgcaa ggcgtacagt ttgatgaagt gctgatttgt ccgcacctgc ccgccgatga
    12061 gtgcgactgc cgtaagccga aagtaaaact ggtggaacgt tatctggctg agcaagcgat
    12121 ggatcgcgct aacagttatg tgattggcga tcgcgcaacc gacattcaac tggcggaaaa
    12181 catgggcatt aatggtttac gctacgaccg cgaaaccctg aactggccga tgattggcga
    12241 gcaactcact aaacgagacc gttacgccca tgtagtgcgc aacaccaaag agacgcaaat
    12301 tgatgtccag gtgtggctgg atcgcgaagg tggcagcaag attaacaccg gtgttggctt
    12361 ctttgatcac atgctggatc agatcgccac ccacggcggt ttccgcatgg aagtcaacgt
    12421 caaaggcgac ctctatatcg acgatcacca caccgtcgaa gataccggcc tggcgctggg
    12481 cgaagcgtta aaaattgccc tcggcgataa acgcggtatt tgccgctttg gttttgtgct
    12541 gccgatggac gaatgccttg cccgctgtgc actggatatc tctggtcgcc cgcacctgga
    12601 atataaagcc gaatttacct accagcgcgt gggcgatctc agcaccgaaa tgatcgagca
    12661 cttcttccgt tcgctctcat acaccatggg cgtgacgttg cacctgaaaa ccaaaggtaa
    12721 aaacgatcat caccgtgtag agagtctctt taaagccttt ggtcgcaccc tgcgccaggc
    12781 catccgcgtg gaaggcgaca ccctgccctc gtcgaaagga gtgctgtaat gaacgtggtg
    12841 atcctggata ccggctgcgc caacctgaac tcggtgaagt ctgccattgc gcgtcacggt
    12901 tatgaaccca aagtcagccg tgacccggac gtcgtgttgc tggccgataa actattttta
    12961 cccggcgttg gcactgcaca agcagcgatg gatcaggtgc gtgagcgcga gctgtttgat
    13021 ctcatcaaag cctgtaccca accggtgctg ggcatctgct tagggatgca actgctgggg
    13081 cggcgcagcg aagagagcaa cggcgtcgat ttgctgggca tcatcgacga agacgtgccg
    13141 aaaatgaccg actttggtct gccactgcca catatgggct ggaaccgcgt ttatccgcag
    13201 gcaggcaatc gcctgtttca ggggattgaa gacggcgcgt acttttactt tgttcacagt
    13261 tacgcaatgc cggtcaattc gtggaccatc gcccagtgta attacggcga accgttcacc
    13321 gcggcggtac aaaaagataa cttctacggc gtgcagttcc acccggagcg ttctggtgcc
    13381 gctggcgcta agctgctgaa aaacttcctg gagatgtgat gattattccg gcattagatt
    13441 taatcgacgg cactgtggtg cgtctccatc agggtgatta cggcaaacag cgcgattacg
    13501 gtaacgaccc gctgccgcgc ttacaggatt acgccgcgca gggtgccgaa gtgctgcacc
    13561 tggtggatct gaccggggca aaagatccgg ctaaacgtca aatcccgctg attaaaaccc
    13621 tggtggcggg cgttaacgtt ccggtgcagg ttggcggcgg cgtgcgtagc gaagaagacg
    13681 tggcggcgtt gctggaagca ggcgttgcgc gcgtggtggt cggttccacc gcggtgaaat
    13741 caccagaaat ggtgaaaggt tggtttgaac gtttcggtgc cgatgcctta gtgctggcgc
    13801 tggatgtccg tattgacgag caaggcaaca agcaggtggc agtcagcggc tggcaagaga
    13861 actcgggcgt ttcactggaa caactggtgg aaacctatct gcccgtcgga ctgaaacatg
    13921 tgctgtgtac cgatatctcg cgcgacggca cgctggcagg ttctaacgtc tctttatatg
    13981 aagaagtgtg cgccagatac ccgcaggtgg catttcagtc atccggcggc attggcgaca
    14041 ttaacgatgt tgctgccctg cgtggtacgg gcgtgcgcgg cgtaatagtt ggtcgtgcat
    14101 tactggaagg taaattcacc gtgaaggagg ccatcgcatg ctggcaaaac gcataatccc
    14161 atgtctcgac gttcgtgatg gtcaggtggt gaaaggcgta cagtttcgca accatgaaat
    14221 cattggcgat atcgtgccgc tggcaaaacg ctacgctgaa gaaggcgctg acgaactggt
    14281 gttctacgat atcaccgctt ccagcgatgg ccgtgtggta gataaaagct gggtatctcg
    14341 cgtggcggaa gtgatcgaca ttccgttctg tgtggcgggt gggattaaat cgctggatga
    14401 cgccgccaaa attctttcct ttggcgcgga taaaatctcc attaactccc ctgcgctggc
    14461 ggacccgacg ttaattactc gcctggccga tcgctttggc gtgcagtgta ttgtggtcgg
    14521 tattgatacc tggtacgacg ccgaaaccgg taaatatcat gtgaatcaat ataccggcga
    14581 tgaaagccgc acccgcgtta ctcagtggga aacactcgag tgggtacagg aagtgcaaaa
    14641 acgcggtgcc ggagaaatcg tcctcaacat gatgaatcag gacggcgtgc gtaacggtta
    14701 cgatctcgaa caactgaaaa aagtgcgtga agtttgccac gtcccgctga ttgcctccgg
    14761 tggcgcaggc accatggaac acttcctcga agccttccgc gatgccgacg ttgacggcgc
    14821 gctggcagct tctgtattcc acaaacaaat aatcaatatt ggtgaattaa aagcgtacct
    14881 ggcaacacag ggcgtggaga tcaggatatg ttaacagaac aacaatgtcg cgaactggac
    14941 tgggaaaaaa ccgacggact gatgccggtg attgtgcaac acgcggtatc cggcaaagtg
    15001 ttaatgctgg gctatatgaa cccggaagcc ttagacaaaa ccatcgaaag cggcaaagtc
    15061 accttcttct cgcgcactaa acagcgactg tggaccaaag gcgaaacatc gggcaatttt
    15121 ctcaatgtgg tgagtattgc cccggactgc gacaacgaca cgttactggt gctggcgaat
    15181 cccatcgggc caacctgcca caaaggcacc agcagctgct tcggcgacac cgctcaccag
    15241 tggctgttcc tgtatcaact ggaacaactg ctcgccgaac gtaaatctgc cgacccggaa
    15301 acctcctaca ctgccaaact gtatgccagc ggcaccaaac gcattgcgca gaaagtgggc
    15361 gaagaaggcg tggaaaccgc actggcagca acggtacatg accgctttga gctgaccaac
    15421 gaggcatctg atttgatgta tcacctgctg gtgctgttgc aggatcagga tctggattta
    15481 acgacggtaa ttgagaacct gcgtaaacgg catcagtgag ttactgggta agcggatgcg
    15541 atgttgttgt cgcatccgga gccatagccc gatgcgcaag cttatcgggc cgactattct
    15601 ctctgcacac gtaagctgga tacatcgcat ccggcaaaaa aaacgggcaa ggtgtcacca
    15661 ccctgcccgt tttctttaaa gctgcaaaga ttatttcgcg ttgtaattac gcagcgcatt
    15721 acgccccagc acaatccccg cgccaaccat gccgcccagc agcaccgcca gaatcaaggt
    15781 aattgccttt ttcgggctat cgcgacgaat aggtaacatc ggtttcatca cataacggta
    15841 agcatgaata tcaagatcat caacctttaa gctttcgata tccagcaggt tttgacgagt
    15901 ctgatagtag tttggcgaga acaccaacgg acgggtcgcc tcatgcttaa tcatcgactc
    15961 cagcgcttcg ctccccaaaa ggaacaacgt atcttgtgtc acatcttcag tctgctgaac
    16021 ttgtggcttt gtcacctgcg cctgattcgc atactgcaac gcttcctgaa tctgacggat
    16081 acgcagatct ttctgctcct gcgcgaccac ttcctgggtt ttcagagagt cctgcaagtt
    16141 tttcatacgc agcgcgatgt tatctttcag gtctttttcc agttcttcat tgacctggtc
    16201 gtcaacttgc tggatatact tcgccagctg tttctgcgca ccttcaggtg tttcacccac
    16261 ataagaaacc gctaacggta atgactgatt tttaacggta ggctcaatgg tcagcttttc
    16321 tgcttcttcc tggttatcca gcgtttccgc taatgctgag aatgcagtgc tgtaacgtcc
    16381 gataagtgaa gcctgaatgt cggagacttt cggtacagct gatccgtaga tcacattcat
    16441 cgcgttggta taaccagcga tttgccccac atcaggttga gtaacgatag ctgtggaagt
    16501 ccacttttct ttggcaacgg ccagataccc tatagccagg gcaatagcca caatgacaga
    16561 aatgatgata gtcatcttgc cgcgccatag ttggaccagt aaatcaatca aatcaatcaa
    16621 atcaatctgt tccgggtcat ggttttgccc agaaacatta ttattttcta ctctcatcat
    16681 taccctaacg gacgaaataa ttttaagtcg ccatagttta gcgataatcg ccatgaatgc
    16741 tataggataa atgataaaaa taatgaatta ttacaaaggg aacataagag aatcagggcg
    16801 aaaatcgccc tgataacaag atgttagtcg ctaccaaaga gatcgcgggt gtagacttta
    16861 tctgccacat ccttaagctc ttctgccatt cggttggaaa taatgacgtc ggcttgttgt
//
LOCUS       DADMHC010000074        16904 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.074, whole genome shotgun sequence.
ACCESSION   DADMHC010000074 DADMHC010000000
VERSION     DADMHC010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16904)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16904)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16904
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.074"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..384)
                     /locus_tag="JNZ57_002057"
     CDS             complement(<1..384)
                     /locus_tag="JNZ57_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HAY8828283.1"
                     /translation="MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLVLFSLAGKNLLDI
                     QTAAFCLVCLLWPTAAVTVKRLHDRGRSGAWAFLMIVAWMLLAGNWAILPGVWQWAVG
                     CFVPTLILVMMLIDLGAFVGTQGENK"
     gene            485..1084
                     /locus_tag="JNZ57_002058"
     CDS             485..1084
                     /locus_tag="JNZ57_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiQ family protein"
                     /protein_id="HAY8828284.1"
                     /translation="MKPGCTLFFLLCSALTVTTTAHAQTPDTATTAPYLLAGAPTFDL
                     SISQFREDFNSQNPSLPLNEFRAIDSSPDKANLTRAASKINENLYASTALERGTLKIK
                     SIQMTWLPIQGPEQKAAKAKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYY
                     TETEGALRYVVADNGEKGLTFAVEPIKLALSESLEGLNK"
     gene            1192..1959
                     /gene="tpiA"
                     /locus_tag="JNZ57_002059"
     CDS             1192..1959
                     /gene="tpiA"
                     /locus_tag="JNZ57_002059"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HAY8828285.1"
                     /translation="MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPE
                     MYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYH
                     KESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFE
                     GAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNA
                     AELFAQPDIDGALVGGASLKADAFAVIVKAAEAAKQA"
     gene            complement(2014..2769)
                     /gene="cdh"
                     /locus_tag="JNZ57_002060"
     CDS             complement(2014..2769)
                     /gene="cdh"
                     /locus_tag="JNZ57_002060"
                     /EC_number="3.6.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol diphosphatase"
                     /protein_id="HAY8828286.1"
                     /translation="MKKAGLLFLVMIVIAVVAAGIGYWKLTGEESDTLRKIVLEECLP
                     NQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFW
                     LAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLAN
                     ISSRWLPLPGGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGSYGLAMVRQS
                     DNSFVLLATQRNLLTLNRASAEEIQDHQCEILR"
     gene            complement(2875..3864)
                     /locus_tag="JNZ57_002061"
     CDS             complement(2875..3864)
                     /locus_tag="JNZ57_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8828287.1"
                     /translation="MNKWGVGLTFLLAATSVMAKDIQLLNVSYDPTRELYEQYNKAFS
                     AHWKQQTGDNVVMRQSHGGSGKQATSVINGIEADVVTLALAYDVDAIAERGRIDKEWI
                     KRLPDNSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAW
                     GYALHHNNNDQAKAQDFVRALYKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLA
                     ANELGKDKFEIVTPSESILAEPTVSVVDKVVEKKGTKEVAEAYLKYLYSPEGQEIAAK
                     NYYRPRDAEVAKKYENAFPKLKLFTIDEEFGGWTKAQKEHFANGGTFDQISKR"
     gene            complement(4184..5146)
                     /gene="pfkA"
                     /locus_tag="JNZ57_002062"
     CDS             complement(4184..5146)
                     /gene="pfkA"
                     /locus_tag="JNZ57_002062"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HAY8828288.1"
                     /translation="MIKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLG
                     LYEDRMVQLDRYSVSDMINRGGTFLGSARFPEFRDENIRAVAIENLKKRGIDALVVIG
                     GDGSYMGAMRLTEMGFPCIGLPGTIDNDIKGTDYTIGFFTALSTVVEAIDRLRDTSSS
                     HQRISVVEVMGRYCGDLTLAAAIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAI
                     VAITEHMCDVDELAHFIEKETGRETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLL
                     LAGYGGRCVGIQNEQLVHHDIIDAIENMKRPFKGDWLDCAKKLY"
     gene            complement(5327..6229)
                     /gene="fieF"
                     /locus_tag="JNZ57_002063"
     CDS             complement(5327..6229)
                     /gene="fieF"
                     /locus_tag="JNZ57_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312867.1"
                     /note="FieF, a metal efflux transporter, is a member of
                     the CDF (cation diffusion facilitator) family of
                     transporters; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family cation-efflux transporter FieF"
                     /protein_id="HAY8828289.1"
                     /translation="MNQSYGRLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALV
                     DSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMFISGSALFLFLTGI
                     QHLISPTPMIDPGVGVIVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMM
                     NGAILLALGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEI
                     IDIVTSWPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFP
                     GSDVIIHQDPCSVVPREGKRSMLS"
     gene            complement(6379..6891)
                     /gene="cpxP"
                     /locus_tag="JNZ57_002064"
     CDS             complement(6379..6891)
                     /gene="cpxP"
                     /locus_tag="JNZ57_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell-envelope stress modulator CpxP"
                     /protein_id="HAY8828290.1"
                     /translation="MRIVTAAVMASTLAVSSLSHAAEVGSGDNWHPGEELTQRRTQRS
                     TQSHMFDGISLTEHQRQQMRDLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQ
                     AEKMANEQIARQVEMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQWQKSSSLK
                     LLSSSNSRSQ"
     gene            7041..7739
                     /gene="cpxR"
                     /locus_tag="JNZ57_002065"
     CDS             7041..7739
                     /gene="cpxR"
                     /locus_tag="JNZ57_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001033718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response regulator transcription
                     factor CpxR"
                     /protein_id="HAY8828291.1"
                     /translation="MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDS
                     IDLLLLDVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPF
                     NDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALVLNPGRQEASFDGQTLELTGT
                     EFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWF
                     KTLRGRGYLMVSAS"
     gene            7736..9109
                     /gene="cpxA"
                     /locus_tag="JNZ57_002066"
     CDS             7736..9109
                     /gene="cpxA"
                     /locus_tag="JNZ57_002066"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress sensor histidine kinase CpxA"
                     /protein_id="HAY8828292.1"
                     /translation="MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQR
                     QGLMIEQHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERSEM
                     QIIRNFIGQADNADHPQKKKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLL
                     FDRPLLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEF
                     LAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELER
                     IETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTV
                     NFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVS
                     PEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIW
                     LPLYKRS"
     gene            complement(9215..9889)
                     /gene="yiiM"
                     /locus_tag="JNZ57_002067"
     CDS             complement(9215..9889)
                     /gene="yiiM"
                     /locus_tag="JNZ57_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418346.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-N-hydroxylaminopurine resistance protein"
                     /protein_id="HAY8828293.1"
                     /translation="MRYPVDVYTGKIQAYPEGKPSAIAKIQVDGELMLTELGLEGDEQ
                     AEKKVHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGD
                     IFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPL
                     ELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFP
                     RRLWGK"
     gene            complement(10038..10949)
                     /gene="kdgT"
                     /locus_tag="JNZ57_002068"
     CDS             complement(10038..10949)
                     /gene="kdgT"
                     /locus_tag="JNZ57_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709713.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxygluconate transporter"
                     /protein_id="HAY8828294.1"
                     /translation="MQIKRSIEKIPGGMMLVPLFLGALCHTFSPGAGKYFGSFTNGMI
                     TGTVSILAVWFFCMGASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVE
                     VGFFAGLSTLALVAAMDMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGT
                     AGIASFEPHVFVGAVLPFLVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTV
                     IAQTGLLGILLGVAVIIVTGIPLIIADKLIGGGDGTAGIAASSSAGAAVATAVIVTSI
                     LVPILTSIWSRKVKARAAKIEILGTVK"
     gene            complement(11209..11829)
                     /gene="sodA"
                     /locus_tag="JNZ57_002069"
     CDS             complement(11209..11829)
                     /gene="sodA"
                     /locus_tag="JNZ57_002069"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010345169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Mn]"
                     /protein_id="HAY8828295.1"
                     /translation="MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALE
                     SLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAA
                     IERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGAS
                     GFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK"
     gene            12113..13147
                     /gene="rhaT"
                     /locus_tag="JNZ57_002070"
     CDS             12113..13147
                     /gene="rhaT"
                     /locus_tag="JNZ57_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose/proton symporter RhaT"
                     /protein_id="HAY8828296.1"
                     /translation="MSNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIV
                     SWIILPWAISALLLPNFWAYYSSFSLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMG
                     IGIAIGITLIVGTLMTPIINGNFDVLLNTEGGRMTLLGVLVALIGVGIVTRAGQLKER
                     KMGIKAEEFNLKKGLVLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYV
                     IIMGGGAIINLGFCFIRLAKVKDLSLKADFSLAKPLIIHNVLLSALGGLMWYLQFFFY
                     AWGHARIPAQYDYISWMLHMSFYVLCGGIVGLVLKEWNNAGRRPVTVLSLGCVVIIVA
                     ANIVGIGMAN"
     gene            complement(13144..14082)
                     /gene="rhaR"
                     /locus_tag="JNZ57_002071"
     CDS             complement(13144..14082)
                     /gene="rhaR"
                     /locus_tag="JNZ57_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709710.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator RhaR"
                     /protein_id="HAY8828297.1"
                     /translation="MAFCNNANLLNVFVRHIANNQLRSLAEVATVAHQLKLLKDDFFA
                     SDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADD
                     KHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFSASAGQPHWRLGSVGMAQARQVI
                     GQLEHESSQHVSFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAAS
                     LKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISD
                     ISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD"
     gene            complement(14066..14902)
                     /gene="rhaS"
                     /locus_tag="JNZ57_002072"
     CDS             complement(14066..14902)
                     /gene="rhaS"
                     /locus_tag="JNZ57_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator RhaS"
                     /protein_id="HAY8828298.1"
                     /translation="MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHG
                     TGIHVFNGQPYTITGGTVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLL
                     PQELDGQYPSHWRVNHSVLQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKS
                     SLQENLENSASRLNLLLAWLEDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQR
                     YLNRLRLMKARHLLRHSEASVTDIAYRCGFSDSNHFSTLFHREFNWSPRDIRQGRDGF
                     LQ"
     gene            15190..16605
                     /gene="rhaB"
                     /locus_tag="JNZ57_002073"
     CDS             15190..16605
                     /gene="rhaB"
                     /locus_tag="JNZ57_002073"
                     /EC_number="2.7.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulokinase"
                     /protein_id="HAY8828299.1"
                     /translation="MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHHFNNGLHS
                     QNGYVTWNVDSLESAIRLELNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAY
                     RDSRSNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLM
                     PDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIG
                     HWICPQGNEIPVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTA
                     LAANITNEGGAEGRYRVLKNIMGLWLLQRVLQERQINDLPAHFLSHCERIKATNGKDR
                     VIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGVGILPWMVPGTDEIGQ
                     ATAQEMQKHSLVLWPFHGVFGSGSTLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISR
                     EELIALGKRFGVTPLASALAL"
     gene            16615..>16904
                     /gene="rhaM"
                     /locus_tag="JNZ57_002074"
     CDS             16615..>16904
                     /gene="rhaM"
                     /locus_tag="JNZ57_002074"
                     /EC_number="5.1.3.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose mutarotase"
                     /protein_id="HAY8828300.1"
                     /translation="MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIY
                     LDKARNLLFATVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSEL"
BASE COUNT         4232 a         4419 c         4224 g         4029 t
ORIGIN      
        1 tttattttcg ccttgtgtgc caacaaacgc accaagatcg ataagcatca tcaccagaat
       61 caacgtcggg acaaaacacc ccaccgccca ttgccagaca cccggtaaaa tcgcccagtt
      121 acccgccagc agcatccacg ccacaatcat cagaaatgcc catgcgccgg aacgcccgcg
      181 atcatgcaag cgcttaacag ttactgccgc tgttggccaa agcaagcaca caaggcaaaa
      241 cgccgcggtc tgaatatcga gtaaattttt acccgccagt gagaaaagca ccagcatgcc
      301 tgcgaaccac aggcctatcc aaatccagaa atcacggcgt ccaatacgcc ctttaaatga
      361 gaataaccat tgctgtatgg tcatgtaagt tccttgatgg ttgtcttttc caggattcta
      421 cccttttgac aagggcgaca gatatcgttt taatcggagc cagtcataac aaaaggtact
      481 gtcaatgaag ccagggtgta cgctgttttt tctcttatgt tctgcattaa ccgttacaac
      541 aacggcgcat gcacaaacac cagatacggc aacgaccgcg ccttatctgc tggctggagc
      601 ccctactttc gatctctcca tcagccagtt tcgagaagac tttaacagcc agaatcctag
      661 cctgccactg aacgaatttc gtgccatcga cagcagtccc gacaaagcca atctcactcg
      721 tgctgcaagt aaaattaacg agaacttgta tgcttctaca gcgctggagc gcggtacctt
      781 aaaaatcaaa agcattcaaa tgacctggct acccatccag gggccagagc aaaaagcagc
      841 gaaagcgaaa gctcaggaat acatggcagc agtgatccgc acactcaccc cattaatgac
      901 caaaacacaa agccagaaaa aactgcagtc gctgctaacg gcggggaaaa acaaacgtta
      961 ttacaccgag acagaaggtg cactgcgtta tgttgtcgcg gacaacggcg aaaaggggct
     1021 gaccttcgct gttgaaccga ttaagctggc gctatctgaa tcgcttgaag gtttgaataa
     1081 atgacaaaaa gcaaagcctt tgtgccgatg aatctctata ctgtttcaca gacctgctgc
     1141 cctgcggggc ggccatcttc ctttattcgc ttataagcgt ggagaattaa aatgcgacat
     1201 cctttagtga tgggtaactg gaaactgaac ggcagccgcc acatggttca cgagctggtt
     1261 tctaacctgc gtaaagagct ggcaggtgtt gctggctgtg cggttgcaat cgcaccaccg
     1321 gaaatgtaca tcgatatggc gaagcgcgaa gctgaaggca gccacatcat gctgggtgcg
     1381 caaaacgtgg acctgaacct gtccggcgca ttcaccggtg aaacctctgc tgctatgctg
     1441 aaagacatcg gcgcacagta catcatcatc ggccactctg aacgtcgtac ttaccacaaa
     1501 gagtctgacg aactgatcgc gaaaaaattc gcggtgctga aagagcaggg tctgactccg
     1561 gttctgtgca tcggtgaaac cgaagctgaa aacgaagcgg gcaaaactga agaagtttgc
     1621 gcacgtcaga tcgacgcggt actgaaaact cagggtgctg cggcattcga aggtgcggtt
     1681 atcgcttacg aacctgtatg ggcaatcggt actggcaaat ctgcaactcc ggctcaggca
     1741 caggctgttc acaaattcat ccgtgaccac atcgctaaag ttgacgctaa catcgctgaa
     1801 caagtgatca ttcagtacgg cggctctgta aacgcgtcta acgctgcaga actgtttgct
     1861 cagccagaca tcgacggcgc gctggttggc ggtgcgtctc tgaaagctga cgctttcgca
     1921 gtaatcgtta aagctgcaga agcggctaaa caggcttaag tctgacaggt gccggatttc
     1981 atatccggca cttactttcc ttaactcttc gccttaacgc aaaatctcac actgatgatc
     2041 ctgaatttcc tcggctgaag cacggttaag cgtcagtaga tttcgttgtg tcgccagcaa
     2101 tacaaatgag ttatcactct gccgtaccat cgccagcccg tagcttccca tatgttcccg
     2161 cgcctcaggt acttcttctg ccagcatcat aaatgggctg cgttgtacca gttcgctttc
     2221 cgttacccga cgcgccaggt attcatgccc gcgcaaacca cctggcagtg gcaaccagcg
     2281 gctgctgatg ttcgccagat tgttatccag ttgttcgcgc acatcaggac gaatacaaga
     2341 gatatgaata tgaaaatggt tttgcgtacg cccggtgcgg gagttgatcg ccaaagaaac
     2401 cgcgcgatcg ggaaccggct ggccgtactt tttgctcata aaatcacgcg cctgccaggc
     2461 caaccaaaag aagttcggcg ttgaaggatc ggtcaacaaa ggactttcag taccgttaat
     2521 acgatacgtt ggcatcaaca gatattgcag tgggccatta agatctttta aaaccacgta
     2581 tccggcattg ggtttgactt ccgcacatgg cgaaggattt tgattttgct gctgattggg
     2641 caaacattcc tcaaggacaa tcttacgtaa tgtatccgac tcttcaccgg ttaatttcca
     2701 gtaaccaata ccggcagcca caacggcgat aactatcatc accaaaaaaa gaagacccgc
     2761 ttttttcatc ttttttccct gtacctcaaa gagatgcaag ggtaacgcaa aatcgtgaca
     2821 aataaaaaac ccggtcgcga gaaaccaccg ggtttgataa ttatcctggg gaaatcagcg
     2881 tttgctgatc tgatcgaacg taccgccgtt agcaaaatgc tctttttgcg ctttcgtcca
     2941 gccgccgaac tcttcatcaa tggtgaataa cttcagcttt ggaaacgcat tttcgtactt
     3001 tttcgctact tcagcgtcgc gcggacggta gtagtttttc gcggcaattt cctgaccttc
     3061 tggcgagtag agatatttca ggtaggcttc cgccacctct ttggtgcctt ttttctcgac
     3121 cactttatcg accaccgaca cggttggctc tgcgaggata gactcactcg gcgtgacgat
     3181 ttcgaattta tctttcccca gttcattcgc tgccagcaga gcttcgtttt cccaggcgat
     3241 cagtacatcg ccaatcccgc gctcgacaaa ggtgttagtg gagccgcgcg cgccagaatc
     3301 cagaacttcg acgtttttat acagtgcccg aacaaaatcc tgtgcttttg cctgatcgtt
     3361 gttgttgtga tgcagcgcgt agccccaggc agccaggtag ttccagcgtg cgccaccaga
     3421 gcttttcgga ttaggcgtga tcaccgaaac acccggttta atcagatcgt tccagtcatg
     3481 gatctgcttc ggattgccct tacgcaccag gaaaacaatg gtggaagtgt acggtgcgga
     3541 gttatccggc agacgtttga tccactcttt atcaatccgc ccgcgttccg caattgcgtc
     3601 cacgtcatag gccagagcca gcgtgacaac atcagcttca ataccgttga ttaccgacgt
     3661 cgcttgttta cctgaaccac cgtgtgactg acgcatcacc acgttatcac cagtttgctg
     3721 tttccagtgg gcgctgaatg ccttgttgta ctgttcgtac aattcgcgcg ttggatcata
     3781 tgaaacgtta agaagctgaa tatcctttgc cataacgctg gttgccgcca gcaaaaatgt
     3841 taaccctacg ccccacttgt tcatcgcccg actctcttat gttgtgttgt gatgagcaaa
     3901 gcgtgccaga aggttaacca aacattaaag aataaaaaaa gattggctat aacttgcggg
     3961 tatatgttga gggattaaaa aggcggaaga aatccgcctc atattgctga caaagtgcgc
     4021 tttgtccatg ccggatgcgg cgcgaacgcc ttatccggcc tacaaaagtt tgcaaattca
     4081 ataaattgca gaattcatgt aggtctgata agcgaagcgc atcaggcatt tttgcttctg
     4141 tcatcggttt caggctaaag gaatctgcct ttttccgaaa tcattaatac agttttttcg
     4201 cgcagtccag ccagtcacct ttgaacggac gcttcatgtt ttcgatagcg tcgatgatgt
     4261 cgtggtgaac cagctgttcg ttctggatac ctacacaacg accgccgtaa cctgccagca
     4321 gcagatcgat agcgtaagcg cccatacggg aagccagaat acggtcgtaa ggcaccggag
     4381 aaccaccgcg ctggatgtgg cccagcacag ttgcgcgggt ttcacgaccg gtttctttct
     4441 cgatgaaatg cgccagttcg tcaacatcac acatatgttc ggtaatcgcc acgatcgcgt
     4501 gttttttacc tttcgcgata cccgctttga tttcgtttac caggtcttca cggctgaatt
     4561 caacttccgg aaccacaacg aattcacagc caccggcaat ggccgcagcc aacgtcagat
     4621 cgccacaata acggcccatc acttccacca cggaaatacg ctggtgagaa gaagaggtgt
     4681 cacgcagacg gtcgatcgct tctacaacgg tgctcagcgc agtgaagaaa ccgatagtgt
     4741 agtcagtgcc tttgatgtcg ttgtcgatag tgcccggcag accgatgcac gggaagccca
     4801 tttcggtcag acgcattgca cccatgtagg aaccgtcacc gccgataacc accagcgcgt
     4861 cgataccacg ttttttcagg ttttcgatag ccacggcgcg gatgttctcg tcgcggaatt
     4921 ccgggaaacg cgcagaaccg aggaacgtac cgccacggtt gatcatgtca gacacgctgt
     4981 aacggtctag ctgtaccata cggtcttcat acagacccag atagccgtca taaataccca
     5041 ttacttccag accttctgtc agcgcagaac gaacaacccc gcgaattgcg gcgttcatgc
     5101 ctggcgcatc accgccgctt gtcaacacac cgattttctt aatcattact acctctgaac
     5161 tttggaatgc aaaatgaaat ctgttgccgg aagtcttctt gcacatcgaa gtgatccaac
     5221 gaatgtgcaa atagtataac aatcacttcc tgctgaattg attcaggtca ggccaaatgg
     5281 cggtatttta tacacaaaat gcgggtctgg ctctctttta tactgattat gaaagcatag
     5341 accgtttacc ctccctgggt acgacggaac aggggtcctg atggataatt acatccgatc
     5401 ccggaaaacg ccgtaaaata gcctgctcta cctgatccgc caccatatgt gcctgaacca
     5461 aaggcagaga gtcttccatt tccaaatgaa tctgaataaa gcgggtcggc cctgactgcc
     5521 gcgtgcgaag atcgtgagcg ccgctaacac ccggccagga agtcacgata tcaataattt
     5581 cttgccgttc ctcatcaggc aatgcgcgat ccagtaatga ctgtaccgcc tcatatccca
     5641 tgcgtaacgc gctatataaa atatagatgc cgattcccaa tgcaaacaga gcatcggcgc
     5701 gatgccagcc gtaccaggac aaccccagcg ccagcagaat tgcgccgttc atcataacat
     5761 cagactggta atgtagcata tcagcccgca ccgcctggct ttgcgtccgg cgcaccaccc
     5821 aacgctgaaa cgagacaagg ataatcgtac aaattagcgc cacaattgtc acgataaccc
     5881 cgacgcctgg atctatcatc ggtgttggag atatcagatg ttgaataccc gtcaaaaaca
     5941 ggaatagtgc cgaaccagag ataaacatac tttgcgccag cgccgcgagg gactctgctt
     6001 taccgtgacc aaacgagtga ttatcgtcgg caggttgcag ggaatatcgc accaccagta
     6061 aattcgtcaa cgacgcgccg atatccacta gcgaatccac cagcgcggcg agaatactca
     6121 ccgacccggt ataccaccat gcaaaaattt taatcagcaa tagcaacgaa gccatcgccg
     6181 tcgcagcaat cgccgcccga ctgaccagcc gtccataaga ttgattcata aatactcccg
     6241 ctatcaactg acgctagtat aacggaagca aatcatctgc aatgcattaa gcagcaggca
     6301 aattgaggat aaaaaaaaaa ccccacatca tgtgggggaa gacagggatg gtgtctatgg
     6361 caaggaaaac agggtttact actgggaacg tgagttgcta ctactcaata gcttcaacga
     6421 tgaacttttt tgccattgcg tcacgtcacg caactgctcc attcgttgtt gatgtttctc
     6481 gtttaaaacc gcttgctgct ccggcgttaa caggcgatac atttggttgc ggacttttgc
     6541 catctcaacc tgacgagcaa tttgctcatt cgccattttt tctgcctgtg cgcgcacagc
     6601 gttttcatca aaattttctg cggtgacaag gcgatgcatt gtctccagtt cgctaacatt
     6661 aacaggaggc tgttcgtgcc gggcctgttg cataagatct cgcatctgct gacgctgatg
     6721 ttcggttaaa cttatgccgt cgaacatatg gctctgcgta ctgcgctgcg tcctgcgctg
     6781 cgtaagttct tcacccggat gccagttatc gcctgaaccg acttcagcag cgtggcttaa
     6841 tgaactgact gccagcgttg aggccatgac ggcagcggta actatgcgca tcatttgctc
     6901 ccaaaatctt tctgtcgcga ttcaacgata gagagtttac gattcaggct gcaaacatgc
     6961 gtcagggggt gtaaaacaac gtaaagtcat ggattagcga cgtctgatga cgtaatttct
     7021 gcctcggagg tatttaaaca atgaataaaa tcctgttagt tgatgatgac cgagagctga
     7081 cttccctatt aaaggagctg ctcgagatgg aaggcttcaa cgtgattgtt gcccacgatg
     7141 gggaacaggc gcttgatctt ctggacgaca gcattgattt acttttgctt gacgtaatga
     7201 tgccgaagaa aaatggtatc gacacattaa aagcacttcg ccagacacac cagacgcctg
     7261 tcattatgtt gacggcgcgc ggcagtgaac ttgatcgcgt tctcggcctt gagctgggcg
     7321 cagatgacta tctcccgaaa ccgtttaatg atcgtgagct ggtggcacgt attcgcgcga
     7381 tcctgcgccg ttcgcactgg agcgagcaac agcaaaacaa cgacaacggt tcaccgacac
     7441 tggaagttga tgccttagtg ctgaatccag gccgtcagga agccagcttc gacgggcaaa
     7501 cgctggagtt aaccggtact gagtttaccc tgctctattt gctggcacag catctgggtc
     7561 aggtggtttc ccgtgaacat ttaagccagg aagtgttggg caaacgcctg acgcctttcg
     7621 accgcgctat tgatatgcac atttccaacc tgcgtcgtaa actgccggat cgtaaagatg
     7681 gtcacccgtg gtttaaaacc ttgcgtggtc gcggctatct gatggtttct gcttcatgat
     7741 aggcagctta accgcgcgca tcttcgccat cttctggctg acgctggcgc tggtgttgat
     7801 gttggttttg atgttaccca agctcgattc acgccagatg accgagcttc tggatagcga
     7861 acagcgtcag gggctgatga ttgagcagca tgtcgaagcg gagctggcga acgatccgcc
     7921 caacgattta atgtggtggc ggcgtctgtt ccgggcgatt gataagtggg caccgccagg
     7981 acagcgtttg ttattggtga ccaccgaagg ccgcgtgatc ggcgctgaac gcagcgaaat
     8041 gcagatcatt cgtaacttta ttggtcaggc cgataacgcc gatcatccgc agaagaaaaa
     8101 gtatggccgc gtggaactgg tcggtccgtt ctccgtgcgt gatggcgaag ataattacca
     8161 actttatctg attcgtccgg ccagcagttc tcaatccgat ttcattaact tactgtttga
     8221 ccgcccgcta ttactgctga ttgtcaccat gttggtcagt acgccgctgc tgttgtggtt
     8281 ggcctggagt ctggcaaaac cggcgcgtaa gctgaaaaac gctgccgatg aagttgccca
     8341 gggaaactta cgccagcacc cggaactgga agcggggcca caggaattcc ttgccgcagg
     8401 tgccagtttt aaccagatgg tcaccgcgct ggagcgcatg atgacctctc agcagcgtct
     8461 gctttctgat atctctcacg agctgcgcac cccgctgacg cgtctgcaac tgggtacggc
     8521 gttactgcgc cgtcgtagcg gtgaaagcaa ggaactggag cgtattgaaa ccgaagcgca
     8581 acgtctggac agcatgatca acgatctgtt ggtgatgtca cgtaatcagc aaaaaaacgc
     8641 gctggttagc gaaaccatca aagccaacca gttgtggagt gaagtgctgg ataacgcggc
     8701 gttcgaagcc gagcaaatgg gcaagtcgtt gacagttaac ttcccgcctg ggccgtggcc
     8761 gctgtacggc aatccgaacg ccctggaaag tgcgctggaa aacattgttc gtaatgctct
     8821 gcgttattcc catacgaaga ttgaagtggg ctttgcggta gataaagacg gtatcaccat
     8881 tacggtggac gacgatggtc ctggcgttag cccggaagat cgcgaacaga ttttccgtcc
     8941 gttctatcgg accgatgaag cacgcgatcg tgaatctggc ggtacaggat tggggctggc
     9001 gattgttgaa accgccattc agcagcatcg tggctgggtg aaggcagaag acagcccgct
     9061 gggcggttta cggctggtga tttggttgcc gctgtataag cggagttaaa ctccgcattt
     9121 gtaggcagga taaggcgttt acgccgcatc cggcatttga gcaggatgcc tgatgcgacg
     9181 ctgatagcgt cttatcaggc ctacactccg ggggttattt tccccacaac cggcggggaa
     9241 aatcttcgat cttgccgctc agtcggcgct tttgcatcgt ccgcgtccag cttttcgata
     9301 acccggcggc ggagagtaaa cggtgatact gatcgtcatc aaacggcata tgccatgcga
     9361 tggcggcagc ctcctgcacg gtcacatcgc tgacacggga aaccaactcc agcggcgcgt
     9421 ccgcagacac tttccctggc gctatcacgc tatacaacca ccccacctta cctgtgtttt
     9481 gcatcaactg cgctatatcg ctgatatcaa aatggtaatt gagtttatag caaggtgagc
     9541 gcggctggct gacctgaatt aatgcctctc cccagcggaa aatatcgccc atataaacat
     9601 tactttccgt caggccgtcg gttgagaggt tttcaccaaa cgcaggcgca acaaacaact
     9661 ccgcctgttc cggaaattcc cgcgcccagt agagataatg ctcacgagga taatgacaca
     9721 gcgctctgtc tggcccaccg tgaacctttt tctccgcctg ctcgtcacct tccagcccca
     9781 gctccgtcag catcaactca ccatcaacct ggattttggc aattgcgctg ggtttgcctt
     9841 cgggataagc ctgaatcttg cctgtgtata catcaaccgg atatcgcatc tgttccctct
     9901 ccacgagaaa tttccccatt agaccatatt tattttatgt caggcgtgct gttttcgcgg
     9961 taagtatcca ggcaggaact caatagcaaa ccggacgaac gttagttcat ccggctgtgg
    10021 ggattaagga agcaggttta tttcaccgta cctaaaattt cgattttcgc tgctctggct
    10081 ttgactttac gtgaccagat agaggtaaga attggcacca gaatcgaagt cacaatgacc
    10141 gccgtcgcta ccgcggcccc tgcggaactg gaagcggcaa ttccggcagt gccatcgcca
    10201 ccgccaatca atttatcggc gataatcaac ggaataccgg tcacgataat tactgccaca
    10261 cccaacagga tccccagcaa accagtctgg gcaatcacag tcaaatcaat ggtattgccc
    10321 agcgcgaagg caaagaatgg aatcagcgtt tgcaccgctt tgctgaaaaa ttctcgtaat
    10381 tcagggtcaa ggttccccag ggcaaagccc accaagaacg gtaatactgc gccgacgaaa
    10441 acatgcggtt caaacgaggc aatccctgca gtgcccagaa taatcatcgt catgagcggc
    10501 ccggactcca acgacatcaa cacaaatgcc ccagcttctt cttttgtgcc gtactgctgc
    10561 atgatggaag cgtaaagtcc gccattggtc atatccatcg ccgccaccag cgccagcgtt
    10621 gaaagtccgg caaagaatcc aacttcaaca ccatgttccg gaataatgcg cgaggcaatt
    10681 gccgcaacca cccacgcgac ggcaattttt gttaccacca gcgtaccgga tttacgcaat
    10741 accgttcccg tcgcgcttaa ttttattgac gcccccatgc aaaaaaacca caccgccaga
    10801 atggacaccg taccggtaat catcccgttg gtgaatgatc caaaatattt ccccgccccc
    10861 ggcgagaagg tgtggcacag tgcgccaagg aatagcggga cgagcatcat cccccccggg
    10921 attttctcaa tcgagcgttt tatctgcatt tccatcacct gtcggcatat ttttaagggc
    10981 tgatgcgtaa ttcctcaatg gagcatcagt gttgatggaa acgaagatag acattcattt
    11041 aatcaataaa agtgatcaaa accacatcaa ttgaaacgct gttttatttt tatcggataa
    11101 ttgtttttat tttgaaattg atcataaaaa aaccaccgcc gttggcgatg gttcattttt
    11161 taagctgata tgcggcgtaa acgcctcatt gcagcaggcg gcaaatgatt attttttcgc
    11221 cgcgaaacgt gccgctgctt catcccagtt caccacgttc cagaactctt tgatgtagtc
    11281 gggacggcgg ttctggaatt tcaggtagta agcatgttcc cacacatcca ggcccagaat
    11341 cgggaagccg gaagcgccag aaatagcttc acccatcagc ggggaatcct ggttagcagt
    11401 agaaaccacc gccagtttat cgcctttcag caccagccat gcccagccgg aaccaaagcg
    11461 ggaagctgcc gctttctcaa attctgcttt gaagttatca acggagccga agtcacgttc
    11521 gatagccgct ttcaggtcac cctgtaaggt ggtgcctttt ttcagacctt tccagaacag
    11581 gctgtggtta gcgtgaccgc cagcgttgtt gcgcagtacg gttttcttgt ctgctggcag
    11641 ctggtccagt ttggtgatca gctcttcaac cggcaggttg gcaaattctg gcaggctttc
    11701 cagcgccgcg ttggcgttgt tgacgtaggt ctgatggtgt ttggtgtggt ggatttccat
    11761 ggtctgctta tcgaagtgcg gttccagggc atcgtaagca tacggcaggg atggcagggt
    11821 atagctcata ttcatctcca gtattgtcgg gcggccgatt gttaatgcgc gtaagcagtt
    11881 ggttcattat agttaattaa atgatattga aaatgattat caatgccgta cttttcgtaa
    11941 gggtatggtt ttgcaggaaa atgcccgaga tgtgaagcaa atcacccact taatgccgtg
    12001 attgccagta aatcgacaac ggcggcaaca ggcgaaaggt taatcgacag cacgattttt
    12061 acactcatct cgtcggagat gtgacgcgac gaaaaatgat gaggataaga agatgagtaa
    12121 cgcgattacg atggggatat tttggcattt gatcggcgcg gccagtgcag cctgttttta
    12181 cgctccgttc aaaaaagtaa aaaaatggtc atgggaaacc atgtggtcag ttggtgggat
    12241 tgtttcgtgg attattctgc cgtgggccat cagcgccctg ttactgccga atttctgggc
    12301 gtattacagc tcgtttagtc tctctacgct gctgcctgtt tttctgttcg gcgctatgtg
    12361 ggggatcggt aatatcaact acggcctgac catgcgttat ctcggcatgt cgatgggaat
    12421 tggcatcgcc attggcatta cgttgattgt cggtacgctg atgacgccaa ttatcaacgg
    12481 caatttcgat gttctgctta ataccgaagg cggacgcatg acgttgctcg gcgttctggt
    12541 ggcgctgatt ggtgtaggga ttgtgactcg cgccgggcag ttgaaagagc gcaaaatggg
    12601 cattaaagcc gaagagttca acctgaaaaa agggctggtg ctggcggtga tgtgcggcat
    12661 tttctctgcc ggtatgtctt ttgcgatgaa cgccgcaaaa ccgatgcatg aagccgctgc
    12721 cgcactgggc gtcgatccac tgtatgtcgc tctgccaagc tatgtcatca tcatgggcgg
    12781 cggcgcgatc atcaacctcg gtttctgctt cattcgtctg gcaaaagtga aggatttgtc
    12841 gctaaaagcc gacttctcgc tggcaaaacc gctgatcatt cacaatgtgt tactctcagc
    12901 actgggcggg ttgatgtggt atctgcaatt ctttttctat gcctggggcc acgcccgcat
    12961 tccggcgcag tatgactaca tcagttggat gctgcatatg agtttctatg tattgtgcgg
    13021 cggtatcgtc gggctggtgc tgaaagagtg gaacaatgca ggtcgccgtc cggtaacggt
    13081 gttgagcctc ggttgtgtgg tgattattgt cgccgccaac atcgtcggca tcggcatggc
    13141 gaattaatct ttctgcgaat tgagatgacg ccactggctg ggcgtcatcc cggtttcccg
    13201 ggtaaacacc accgaaaaat agttactatc ttcaaagcca cattcggtcg aaatatcact
    13261 gattaacagg cggctatgct ggagaagata ttgcgcatga cacactctga cctgccgcag
    13321 atattgattg atggtcattc cagtctgctg gcgaaattgc tgacgcaaaa cgcgctcact
    13381 gcacgatgcc tcatcacaaa atttatccag cgcaaaggga cttttcaggc tagccgccag
    13441 ccgggtaatc agcttatcca gcaacgtttc gctggatgtt ggcggcaacg aatcactggt
    13501 gtaacgatgg cgattcagca acatcaccaa ctgcccgaac agcaactcag ccatttcgtt
    13561 agcaaacgac acatgctgac tactttcatg ctcaagctga ccgataacct gccgcgcctg
    13621 cgccatcccc acgctaccta agcgccagtg tggttgccct gcgctggcgc taaatcccgg
    13681 aatcgctccc tgccagtcaa gattcagctt cagccgctcc gggcaataaa taatattctg
    13741 caaaaccaga tcgttaacgg aagcgtagga gtgtttatcg tcagcatgaa tgtaaaagag
    13801 atcgccacgg gtaatgcgat aagggcgatc gttgagtaca tgcagaccat taccgcgcca
    13861 gacaatcacc agctcacaaa aatcatgtgt atgttcggca aaaacatctt gcggataacg
    13921 gtcagccaca gcgactgcct gctggtcgct ggcaaaaaaa tcatctttga gaagttttaa
    13981 ctgatgcgcc accgtggcta cctcggccag agaacgaagt tgattattcg caatatggcg
    14041 tacaaatacg ttgagaagat tcgcgttatt gcagaaagcc atcccgtccc tggcgaatat
    14101 cacgcggtga ccagttaaac tctcggtgaa aaagcgtcga aaagtggtta ctgtcgctga
    14161 atccgcagcg ataggcgatg tcagtaacgc tggcctcgct gtgacgtagc agatgtcggg
    14221 ccttcatcag tcgcaggcgg ttcaggtaac gctgaggcgt cagtcccgtt tgctgcttaa
    14281 gctgccgatg tagcgtacgc agtgaaagag aaaattgatc cgccacggca tcccaattca
    14341 cctcatcggc aaaatggtcc tccagccagg ccagaagcaa gttgagacgt gatgcgctgt
    14401 tttccaggtt ctcctgcaaa ctgcttttac gcagcaagag cagtaattgc ataaacaaga
    14461 tctcgcgact ggcggtcgag ggtaaatcat tttccccttc ctgctgttcc atctgtgcaa
    14521 ccagctgtcg cacctgctgc aatacgctgt ggttaacgcg ccagtgagac ggatactgcc
    14581 catccagttc ttgtggcagc aactgattca gcccggcgag aaactgaaat cgatccggcg
    14641 agcgatacag cacattggtc agacacagat tatcggtatg ttcatacaga tgccgatcat
    14701 gatcgcgtac gaaacagacc gtgccaccgg tgatggtata gggctgccca ttaaacacat
    14761 gaatacccgt gccatgttcg acaatcacaa tttcatgaaa atcatgatga tgttcaggaa
    14821 aatccgcctg cgggagccgg ggttctatcg ccacggacgc gttaccagac ggaaaaaaat
    14881 ccacactatg taatacggtc atactggcct cctgatgtcg tcaacacggc gaaatagtaa
    14941 tcacgaggtc aggttcttac cttaaatttt cgacggaaaa ccacgtaaaa aacgtcgatt
    15001 tttcaagata cagcgtgaat tttcaggaaa tgcggtgagc atcacatcac cacaatgaag
    15061 caaattgtga atatcatcac gttcatcttt ccctggttgc caatggccca ttttcctgtc
    15121 agtaacgaga aggtcacgaa ttcaggcgct ttttagactg gtcgtaatga aattcagcag
    15181 gatcacatta tgacctttcg caattgtgtc gccgtcgatc tcggcgcatc cagtgggcgc
    15241 gtgatgctgg cgcgttacga gcgtgaatgc cgcagcctga cgctgcgcga aatccatcat
    15301 tttaacaatg gcctgcatag ccagaacggt tatgtcacct ggaatgtgga tagcctggaa
    15361 agtgccattc gccttgaatt aaacaaggtg tgcgaggaag ggattcgtat cgatagcatt
    15421 gggattgata cctggggcgt ggactttgtg ctgctcgacc aacagggtca gcgtgtgggc
    15481 ctgcccgttg cttatcgcga tagccgctcc aatggcctaa tggcgcaggc acagcaacaa
    15541 ctcggcaaac gcgatattta tcaacgtagc ggcatccagt ttctgccctt caatacgctt
    15601 tatcaactgc gtgcgctgac ggagcaacaa cctgaactta ttccacacat tgctcacgct
    15661 ctgctgatgc cggattactt cagctatcgc ctgaccggca agatgaactg ggaatatacc
    15721 aatgccacca ccacacaact ggtcaatatc aatagcgacg actgggacga gtcgctactg
    15781 gcgtggagcg gggccaacaa agcctggttt ggtcgcccga cgcatccggg taatgtcatt
    15841 gggcactgga tttgcccgca gggtaatgag attccggtgg tcgccgttgc cagccatgat
    15901 accgccagcg cggttatcgc ctcgccgtta aacggttcac gcgctgctta tctctcttct
    15961 ggcacctggt cattgatggg cttcgaaagc cagacgccat ttaccaatga cacggcgctg
    16021 gcagccaaca taaccaatga aggcggggcg gaaggtcgct atcgggtgct gaaaaatatt
    16081 atgggcttat ggctgcttca gcgagtgctt caggagcggc aaatcaacga tctcccggcg
    16141 cactttctct cccactgcga gcgcattaaa gccaccaacg gtaaagatcg ggtgatcatg
    16201 cactgccacg ccaccaacct gatcgccctc acctatgtac tggaaaacga caccgcggtc
    16261 tttactcgcc aactgtggga aggcagcacc gagtgtctgg tggtattccc ggatggcgtt
    16321 ggcattctgc cgtggatggt gcccggcacg gacgaaatcg gccaggcgac cgcacaagag
    16381 atgcaaaaac attcgctggt gttgtggccc ttccacggcg tcttcggcag cgggtcgacg
    16441 ttggatgaaa cattcggttt aatcgacacc gcagaaaaat cagcacaagt attagtgaag
    16501 gtttattcga tgggcggcat gaaacagacc atcagccgtg aagagttgat agcgctcggc
    16561 aagcgcttcg gcgttacacc actagccagt gcgctggcgc tgtaaggagc aaacatgatc
    16621 cgcaaagcct ttgtcatgca ggttaacccc gacgcccacg aagagtatca gcgtcggcat
    16681 aaccccatct ggccggaact ggaagcagtg ttgaaatctc acggtgcgca taactacgcc
    16741 atttacctcg acaaagcgcg taatctgctg tttgccacgg tagagattga atctgaagaa
    16801 cggtggaatg cggtagccag tactgatgtt tgccaacgtt ggtggaaata tatgaccgat
    16861 gttatgcccg ctaacccgga taacagcccg gtgagtagcg agct
//
LOCUS       DADMHC010000075        16822 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.075, whole genome shotgun sequence.
ACCESSION   DADMHC010000075 DADMHC010000000
VERSION     DADMHC010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16822)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16822)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16822
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.075"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            1..1119
                     /gene="bluF"
                     /locus_tag="JNZ57_002075"
     CDS             1..1119
                     /gene="bluF"
                     /locus_tag="JNZ57_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001386733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="blue light-responsive regulator BluF"
                     /protein_id="HAY8828301.1"
                     /translation="MQSDVTGILLFNGSHFFQLLEGPEEQVKMIYRAICQDPRHYNIV
                     ELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFV
                     LATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFE
                     AIVQKNEDSPSAIAVGQRKYGEIYTADLKSKALAFTMAHALELGDKMISINLLPMTLV
                     NEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHF
                     GAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVA
                     TPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK"
     gene            1324..2055
                     /locus_tag="JNZ57_002076"
     CDS             1324..2055
                     /locus_tag="JNZ57_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HAY8828302.1"
                     /translation="MAYYSIGDVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRLFDE
                     EDIQRIEEIKRWISNGVPVGKVKALLETTSQDTEDDWSRLQEEMMSILRMANPAKLRA
                     RIISLGREYPVDQLINHVYLPVRQRLVLDHNTSRIMSSMFDGALIEYAATSLFEMRRK
                     PGKEAILMAWNVEERARLWLEAWRLSLSGWHISVLADPIESPRPELFPTQTLIVWTGM
                     APTRRQNELLQHWGEQGYKVIFHAP"
     gene            2276..2680
                     /locus_tag="JNZ57_002077"
     CDS             2276..2680
                     /locus_tag="JNZ57_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1398 domain-containing protein"
                     /protein_id="HAY8828303.1"
                     /translation="MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNI
                     RIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALLHIYGKSTFREYCSTLAGAGVFR
                     WVTDVNHNKRSYYAIDNTLLYIEDVENNKPLI"
     gene            2733..2843
                     /locus_tag="JNZ57_002078"
     CDS             2733..2843
                     /locus_tag="JNZ57_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828304.1"
                     /translation="MGIKVQRLSLWMINTVLLLLPINNHQANTIKLIFEM"
     gene            3376..3696
                     /gene="iraM"
                     /locus_tag="JNZ57_002079"
     CDS             3376..3696
                     /gene="iraM"
                     /locus_tag="JNZ57_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraM"
                     /protein_id="HAY8828305.1"
                     /translation="MKWVVIDTVIQPTCGISFSAIWGDMKMIIWYQSTIFLPPGSIFT
                     PVKLGIILQEKEYPITIYNIAPFNKNLWSLLKSSQECPPGESKITNKCLHNSCIIKIC
                     SICY"
     gene            complement(3764..5014)
                     /gene="icd"
                     /locus_tag="JNZ57_002080"
     CDS             complement(3764..5014)
                     /gene="icd"
                     /locus_tag="JNZ57_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000444467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HAY8828306.1"
                     /translation="MESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPA
                     MLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIREYRVAIKGP
                     LTTPVGGGIRSLNVALRQELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIY
                     AGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAI
                     ANDRDSVTLVHKGNIMKFTEGAFKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIV
                     IKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECAL
                     FEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMGWTEAADLIVKGMEGAINAKTVTYD
                     FERLMEGAKLLKCSEFGEAIIENM"
     gene            5186..5839
                     /gene="rluE"
                     /locus_tag="JNZ57_002081"
     CDS             5186..5839
                     /gene="rluE"
                     /locus_tag="JNZ57_002081"
                     /EC_number="5.4.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309634.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2457) synthase RluE"
                     /protein_id="HAY8828307.1"
                     /translation="MRQFIISENTMQKTSFRNHLVKRFSSQRSTRRKPENQPTRVILF
                     NKPYDVLPQFTDEAGRKTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPG
                     KRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRER
                     KSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYTLDNLANGEWREATE"
     gene            5849..6310
                     /gene="nudJ"
                     /locus_tag="JNZ57_002082"
     CDS             5849..6310
                     /gene="nudJ"
                     /locus_tag="JNZ57_002082"
                     /EC_number="3.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase NudJ"
                     /protein_id="HAY8828308.1"
                     /translation="MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETL
                     VEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDID
                     CCRWVSAEEILKASNLRSPLVAESIRCYQSEQRYPLEMIGDFNWPFTKGVI"
     gene            6364..7470
                     /gene="mnmA"
                     /locus_tag="JNZ57_002083"
     CDS             6364..7470
                     /gene="mnmA"
                     /locus_tag="JNZ57_002083"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HAY8828309.1"
                     /translation="MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD
                     GEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWNNVFELFLAEYKAGRTPNPDILC
                     NKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSH
                     EQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP
                     GKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQG
                     HEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFD
                     EPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPLPV"
     gene            7506..8147
                     /gene="hflD"
                     /locus_tag="JNZ57_002084"
     CDS             7506..8147
                     /gene="hflD"
                     /locus_tag="JNZ57_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high frequency lysogenization protein HflD"
                     /protein_id="HAY8828310.1"
                     /translation="MAKNYYDITLALAGICQSARLVQQLAHQGHCDADALHVSLNSII
                     DMNPSSTLAVFGGSEANLRVGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSA
                     KGALDTLGNRINGLQRQLEHFDLQSETLMSAMAAIYVDVISPLGPRIQVTGSPAVLQS
                     PQVPAKVRATLLAGIRAAVLWHQVGGGRLQLMFSRNRLTTQAKQILAHLTPEL"
     gene            8151..9521
                     /gene="purB"
                     /locus_tag="JNZ57_002085"
     CDS             8151..9521
                     /gene="purB"
                     /locus_tag="JNZ57_002085"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006819529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HAY8828311.1"
                     /translation="MELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWL
                     QKLAAHAAIKEVPAFAADAIGYLDAIVANFSEEDAARIKTIERTTNHDVKAVEYFLKE
                     KVAEIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQ
                     YRDIPLLSRTHGQPATPSTIGKEMANVAYRMERQYRQLNQVEILGKINGAVGNYNAHI
                     AAYPEVDWHQFSEEFVTSLGIQWNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVW
                     GYIALNHFKQKTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQ
                     RDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKLEVNRDHLLDELDHNWEVLAEPIQTV
                     MRRYGIEKPYEKLKELTRGKRVDAEGMKQFIDGLALPEEEKARLKAMTPANYIGRAIT
                     MVDELK"
     gene            9689..10360
                     /gene="phoP"
                     /locus_tag="JNZ57_002086"
     CDS             9689..10360
                     /gene="phoP"
                     /locus_tag="JNZ57_002086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator PhoP"
                     /protein_id="HAY8828312.1"
                     /translation="MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHL
                     PDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKP
                     FHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRRELSINDEVIKLTAFEYTIMET
                     LIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKKIQAQYPQEVITTVRGQGY
                     LFELR"
     gene            10360..11820
                     /gene="phoQ"
                     /locus_tag="JNZ57_002087"
     CDS             10360..11820
                     /gene="phoQ"
                     /locus_tag="JNZ57_002087"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     PhoQ"
                     /protein_id="HAY8828313.1"
                     /translation="MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSF
                     DKTTFRLLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDV
                     PWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVA
                     VNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSL
                     RPIEALAKEVRELEEHNRELLNPATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLT
                     HSLKTPLAVLQSTLRSLRSEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGGTLLS
                     RELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACK
                     YCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAR
                     EITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE"
     gene            11896..13017
                     /locus_tag="JNZ57_002088"
     CDS             11896..13017
                     /locus_tag="JNZ57_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309600.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HAY8828314.1"
                     /translation="MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLA
                     MESEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRE
                     LPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLL
                     QVDPFEAIIDEELEPGDILYIPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYV
                     LQRELGGNYYSDPDVPPRAHPADVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSR
                     HELDIAPPEPPYQPDEIYDALKQGDVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALD
                     ALASNIALTAENFGDALEDPSFLAMLAALVNSGYWFFEG"
     gene            complement(13066..14292)
                     /gene="pepT"
                     /locus_tag="JNZ57_002089"
     CDS             complement(13066..14292)
                     /gene="pepT"
                     /locus_tag="JNZ57_002089"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HAY8828315.1"
                     /translation="MDKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEE
                     MGLINVTLSEKGTLMATLPANVPGDIPAIGFISHVDTSPDCSGKNVNPQIVENYRGGD
                     IALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLQQKNI
                     PHGDIRVAFTPDEEVGKGAKHFDVDAFDARWAYTVDGGGVGELEFENFNAASVNIKIV
                     GNNVHPGTAKGVMVNALSLAARIHAEVPADESPEMTEGYEGFYHLAGMKGTVERADMH
                     YIIRDFDRKQFEARKCKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILD
                     IAQQAMRDCDIEPELKPIRGGTDGAQLSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEK
                     AVQVIVRIAELTAQRK"
     gene            14542..15678
                     /gene="potA"
                     /locus_tag="JNZ57_002090"
     CDS             14542..15678
                     /gene="potA"
                     /locus_tag="JNZ57_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     ATP-binding protein PotA"
                     /protein_id="HAY8828316.1"
                     /translation="MGQSKKLNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGE
                     FLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFP
                     HMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIAR
                     AVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRI
                     VVMREGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNATVIERLDEQRVRANVEGREC
                     NIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGYVRERNYKGMTLESVVELE
                     NGKMVMVSEFFNEDDPDFDHSLDQKMAINWVESWEVVLADEEHK"
     gene            15662..16525
                     /gene="potB"
                     /locus_tag="JNZ57_002091"
     CDS             15662..16525
                     /gene="potB"
                     /locus_tag="JNZ57_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309597.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotB"
                     /protein_id="HAY8828317.1"
                     /translation="MKNTSKFQNVVIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFV
                     KMVLTLDNYTRLLDPLYFEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLL
                     FLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYI
                     LLPFMVMPLYSSIEKLDKPLLEAARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPA
                     MGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLVYWRASR
                     LLNKKVSELDD"
     gene            complement(16757..>16822)
                     /locus_tag="JNZ57_002092"
     CDS             complement(16757..>16822)
                     /locus_tag="JNZ57_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001387760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8828318.1"
                     /translation="LLNRVDTSTAPDIEWPTSPAE"
BASE COUNT         4335 a         4079 c         4048 g         4360 t
ORIGIN      
        1 atgcagtctg acgtaacagg gatcttactg tttaatggtt ctcatttttt ccagcttctg
       61 gaaggtccgg aagaacaggt taaaatgata tatcgggcta tatgccagga tccacggcac
      121 tataatattg ttgagctgct gtgcgattac gcgcctgctc gccgttttgg caaagcggga
      181 atggaattat ttgatttgcg cctgcacgag cgagatgacg ttttacaggc cgtattcgac
      241 aaaggcacat caaaatttca gctaacttat gatgacagag cgctacaatt ttttcgtact
      301 tttgtccttg caaccgaaca atcaacctat ttcgagatcc ctgccgaaga ctcctggctt
      361 tttatcgctg acggatctga taaagaactt gattcctgtg ccctttcacc aactataaac
      421 gaccactttg cctttcatcc tattgtcgat cccttatcgc ggcggataat cgcttttgaa
      481 gccattgtgc aaaaaaatga agatagccca tcagccatag cggttgggca gcgtaaatac
      541 ggggaaatct acacagcgga tctcaaaagt aaggcgcttg cattcacgat ggcacacgca
      601 cttgagctcg gtgataaaat gatttcaatc aatctattac ctatgaccct ggttaacgaa
      661 cctgacgcag tctctttttt acttaatgaa ataaaggcca atgctctggt gcctgaacaa
      721 atcatcgttg aatttactga aagtgaagtc atatctcggt ttgatgagtt tgccgaagcg
      781 attaaatcgc taaaggctgc tggtatcagt gtagcaattg atcattttgg cgcaggtttt
      841 gctggtttgt tactcctgtc acgcttccag cctgacagaa ttaaaatcag tcaggaattg
      901 attaccaatg ttcataaaag tgggccacgg caggcaatta ttcaggcgat cataaaatgc
      961 tgtacatcac ttgaaattca agtcagtgct atgggcgtgg caacaccaga agagtggatg
     1021 tggcttgaat ccgcaggaat tgagatgttt cagggagatc tgtttgctaa agctaaattg
     1081 aatggtatcc cttccatagc gtggccagag aaaaaataat tttcagcaca ttctttcaca
     1141 tgatttcagt aaatcatcgt gaaaatgaat acgttacgtt taaatttaat ccacattaaa
     1201 aataatgttt catccaattt agctgaaatc ttatttatac tttgtacaat tttagcgtat
     1261 attgtacaaa gtattattgg gtcgtgtaca ggcgacggag atttgtgacc gcaaggagga
     1321 attgtggctt attacagcat tggtgatgtt gctgaacgtt gcgggattaa tcctgtcact
     1381 ctccgggcct ggcaacgccg ctacggtttg ttaaaaccac agcgcagtga aggcggacac
     1441 cgactctttg atgaagaaga catacaacgc atcgaagaga tcaagcgttg gataagtaat
     1501 ggcgtccctg taggcaaagt taaagcatta ctggaaacca ccagccagga tacggaagat
     1561 gactggagcc gcctgcaaga agagatgatg tcaattcttc gcatggctaa tcctgccaaa
     1621 ctacgcgcga gaattatttc actgggtcga gagtacccag tagatcaatt gattaatcat
     1681 gtttaccttc ctgttcgcca gcgtctcgtg cttgatcaca acacctcccg cattatgagc
     1741 agtatgtttg acggcgcatt aattgaatac gcagcaacct cgcttttcga aatgcgccgt
     1801 aagcccggta aagaagccat tctgatggcg tggaatgttg aagagagagc acgattgtgg
     1861 ctggaagcat ggcgtttatc attgtcagga tggcacattt ctgttcttgc tgatcccatt
     1921 gaatcgccgc gcccggaact gttcccgacg caaacattga ttgtctggac aggcatggca
     1981 ccaacgagaa ggcaaaacga acttttacaa cactggggtg agcaaggtta taaagtcatc
     2041 tttcatgccc cctaatttca cctttatccc gccccttaga cagaatgtta taatctgaac
     2101 ccacaacagc atttgtaccg gagctgatcc gttgcaaaat gctcaccggg agaattcagg
     2161 taatccctct atcacactct gtacatatca cagccaaagg acagaccaga ttgaagtggt
     2221 aaaaccgatc gtgcacacta cgcagtctca caactaacaa gaggttatta tcctgatgga
     2281 tcaggtcgtt gtttttcaaa agatgtttga gcaagtgaga aaagagcaaa acttctcctg
     2341 gttttattca gaattaaaac atcaccgtat tgcacattac atttattatc tggctacgga
     2401 taacatcaga attattactc acgatgacac ggttttgtta ttaagaggaa ccaggaacct
     2461 gttaaaagtt agtacgacca agaaccctgc taaaataaaa gaggccgcat tgcttcatat
     2521 ttacggaaaa tctacatttc gggaatactg ttcaacactg gcaggcgcgg gcgttttccg
     2581 ttgggttact gatgttaatc ataacaaacg cagttactac gccattgata atacgctttt
     2641 atatattgaa gatgtagaaa ataataaacc attaatctag ctaaagttgg atgcttaaga
     2701 aatgcttcat aattcagtaa ggcattagca taatgggaat aaaagtacag agactatccc
     2761 tatggatgat aaatactgtc cttttattgc tacccataaa taatcaccag gccaatacta
     2821 tcaaattgat atttgaaatg tgatcacttg actttctatt cgttatttta taacggttaa
     2881 tatatttata aaaacaacgg gtgtgccata cgcccgtttc aatacttaac gcacatgtgt
     2941 tttggtttat tcatcatcca gttatacgta ttttagccag gaacaggtta aacctttcct
     3001 atataactca aaaattgaaa ccttattctc atgtcatgtt tatattcatt attatcgtta
     3061 tataaaaagg caaccataat gtttagcaaa ttggcaccaa gtagcataaa ggttatgttt
     3121 taattacagg atgttcagtc atttgaatgt ataacattat agctaaacaa atctaaaacg
     3181 aagtgaataa tttattgttt tcactaaatc tcattttgtt taacatccat tgagattcct
     3241 tgctttaaat tttgttttat ataagcaatc gttttaatta atttattttt tgaaggggta
     3301 atatactcat atgcaaaata aagaaatgaa catccaaatg aactatatta aataccgtgg
     3361 gataagacat aacaaatgaa gtgggtagta attgacacgg taattcaacc tacatgcggc
     3421 atatcttttt cagccatatg gggtgatatg aaaatgatca tctggtatca atctactata
     3481 tttcttcctc ctggaagtat atttacaccg gttaagcttg gtattatcct tcaggaaaaa
     3541 gaatatccta ttactattta taacattgca ccattcaaca agaatttatg gagtttactc
     3601 aaaagcagtc aagagtgtcc tccaggagaa agcaaaataa caaataaatg tttacataat
     3661 agttgcatta taaaaatatg ctcgatatgc tattaataat atccacataa ataaaacaac
     3721 gggcgtgtta tacgcccgtt tcaatattta actcatggag agattacatg ttttcgatga
     3781 tcgcttcacc aaactctgaa catttcagca gcttagcgcc ttccatcaga cgttcaaagt
     3841 cataagttac ggttttcgcg ttgatagcac cttccatacc tttaacaatt aaatcagccg
     3901 cttcagtcca ccccatatgg cgcagcatca tctcagcgga gaggatgata gagcctggat
     3961 ttactttgtc ctgaccggcg tatttcggcg cagtaccgtg ggtggcttca aacagggcgc
     4021 attcgtcacc gatgtttgct ccaggggcga taccgatacc gccaacctgc gctgccaggg
     4081 cgtcagaaat gtagtcaccg ttcaggttca tacaggcgat aacatcatat tcagccggac
     4141 gcagcaggat ctgttgcagg aatgcatcag caatcacgtc tttaatgacg atctctttgc
     4201 cggtgttcgg gtttttaact ttcagccacg ggccgccgtc gatcagttca ccgccaaact
     4261 cttcacgcgc cagctggtag ccccagtctt taaacgcgcc ttcggtgaac ttcatgatgt
     4321 tgcctttgtg caccagagtc acagagtcac gatcgttagc aattgcgtat tcgatcgctg
     4381 cacgaaccag acgtttggtg ccttcttccg aacacggctt aataccgata ccacaatgtt
     4441 ccgggaagcg aattttcttc acccccatct cttcacgcag gaatttaatc actttctcgg
     4501 cgtcggcaga gtctgctttc cattcgatac ccgcataaat gtcttccgag ttttcacgga
     4561 agataaccat atcggtcagt tcagggtgtt taaccgggct tggagtgccc tgatagtaac
     4621 gtaccggacg caggcagatg tagagatcca gttcctggcg cagggcaacg ttcagagagc
     4681 gaataccgcc accaacagga gtggtcagcg gacctttaat ggcaacgcga tattcacgaa
     4741 tcagatcaag ggtttcagca ggcagccaga catcctgacc ataaacctgt gtggattttt
     4801 caccggtgta aatttccatc caggagattt tacgctcgcc tttataggct ttctcgactg
     4861 cagcgtcgac cactttcagc atggctgggg ttacatctac accgattcca tcaccttcaa
     4921 tgtaagggat aatcggattt tcaggaacgt tgagtttgcc gttttgcagg gtgatcttct
     4981 tgccttgtgc cggaacaact actttacttt ccattcacct ctccttcgag cgctactggt
     5041 ttgctcgtct gccaccacgt tgcatatgcg tttgcgtcct gcgatacgga tgctttagag
     5101 caattttttg ttaatgattt gtaattggct tgtcaatact accctattgt ttgccgtcat
     5161 gaaagatgcg cgttattagg ctataatgcg gcaattcata atctctgaaa ataccatgca
     5221 aaaaacttct tttagaaatc acctggttaa gcgattcagc tcgcaacgtt ctaccaggcg
     5281 taaacctgaa aaccagccca cgcgtgtgat cctgttcaat aaaccctacg atgttcttcc
     5341 gcagttcacc gatgaagccg gacgcaaaac attaaaagaa ttcatcccgg ttcagggcgt
     5401 ttatgcagca ggtcgtcttg accgcgatag cgaagggtta ctggtgctga ccaataacgg
     5461 cgcgttgcag gcgcgtttaa cccagccggg caaacgcacc gggaaaatct attatgtgca
     5521 ggtggaaggt attcccacac aagacgcact tgaagccttg cgcaatggcg taaccttaaa
     5581 tgatggccct accctgcccg ccggcgcgga gctggttgac gaaccagcgt ggttatggcc
     5641 gcggaatcca ccaattcgtg aacgcaaaag tattcccacc agctggctga agatcacctt
     5701 atatgaagga cgtaatcgcc aggtgcgccg catgaccgcc catgttggtt tccccacgct
     5761 gcgactgatt cgttatgcga tgggtgatta cactttggat aaccttgcca atggcgaatg
     5821 gcgagaagca acagaataag gatgcacaat gtttaaaccg cacgttaccg ttgcttgcgt
     5881 agtgcacgca gagggtaaat ttttagtcgt tgaagagacg attaatggta aagcgttatg
     5941 gaaccaacct gccgggcatc tggaagccga tgaaacctta gtggaagctg ccgcccgtga
     6001 gctatgggaa gaaaccggca tcagcgcgca accgcaacac tttattcgta tgcatcagtg
     6061 gattgcgcca gataaaacgc cgtttttgcg tttcctcttt gccattgagc ttgagcaaat
     6121 atgcccgacc cagcctcatg acagcgatat cgactgctgt cgttgggtca gcgccgaaga
     6181 aattttaaag gcgtcaaatc ttcgttcgcc gctggtggcg gaaagtatcc gttgttatca
     6241 aagcgagcaa cgctatccgc tggagatgat tggcgatttt aactggcctt ttacaaaggg
     6301 tgtcatctaa aaggctgcgt gatagaatac gccgccttga agttcaatgt cgtgagtgat
     6361 ccaatgtctg aaaccgcaaa aaaagtaatc gtcggcatgt ccggcggtgt cgattcctcc
     6421 gtttctgcct ggctgttgca acaacaggga tatcaggttg aaggcctgtt tatgaagaac
     6481 tgggaagaag acgacggtga ggaatattgc acagcggcag cggatctggc tgatgcccag
     6541 gctgtctgcg acaagctcgg cattgaactg cacaccgtta actttgctgc cgagtactgg
     6601 aacaacgtct tcgaactgtt ccttgccgaa tataaagccg gtcgcacgcc gaatccggat
     6661 attctgtgca acaaagagat caaatttaaa gctttcctcg aatttgccgc cgaagattta
     6721 ggtgccgatt atatcgctac cggtcattac gtacgtcggg ccgatgtcga tggcaagagc
     6781 cgcctgctgc gtggtctgga cagcaataaa gaccagagct acttccttta tacgctcagc
     6841 catgagcaga ttgcgcaaag cctgttcccg gtcggcgaac tggaaaaacc gcaggtgcgt
     6901 aagattgctg aagatcttgg tctggtcacc gcgaagaaaa aagactctac cggcatttgc
     6961 ttcattggcg aacgtaaatt ccgcgagttc ctgggccgtt atctcccggc gcaaccgggc
     7021 aaaatcatta ccgtcgatgg cgatgaaatt ggtgagcacc aggggctgat gtatcacact
     7081 ctcggtcagc gtaaaggtct gggtatcggt ggcaccaaag aaggcaccga agaaccgtgg
     7141 tatgtggtgg acaaagacgt cgaaaacaac attctggttg ttgcgcaggg ccatgaacac
     7201 ccgcggctga tgtctgtcgg gttgattgcc cagcagttgc actgggtcga tcgcgaacca
     7261 ttcaccggta ctatgcgttg cacggtaaaa acccgctatc gccagaccga tatcccttgc
     7321 accgtcaagg cgctggacga tgatcgcatt gaagtgattt tcgatgaacc ggttgccgcc
     7381 gtgacgccgg gccagtctgc cgtcttctat aacggtgaag tgtgcctcgg tggcggtatt
     7441 attgagcagc gtctgccgct gccggtctga ttattatctt tacttaaaac aaggaagcag
     7501 tgaacgtggc aaagaattac tatgacatca ccctcgccct ggccggtatt tgtcagtcgg
     7561 cacgcctggt gcaacaactc gctcaccagg ggcattgtga tgccgatgcg ctacacgtct
     7621 cactcaacag tattattgat atgaacccca gctcgacgct ggcggttttt ggcggtagcg
     7681 aagccaacct gcgcgtcggg ctggaaaccc tgctcggcgt gctcaatgcc agcagtcgcc
     7741 agggcttaaa cgccgaatta acccgctaca cactcagctt gatggtgctt gagcgcaaac
     7801 tctcctcagc gaaaggcgcg ctcgacactc tgggcaaccg gatcaacggc ctgcaacgcc
     7861 agctcgaaca cttcgattta cagtccgaaa cgctgatgag cgcgatggct gctatctatg
     7921 ttgatgtgat cagcccgctt ggcccgcgca ttcaggtcac cggttcccct gctgtactgc
     7981 aaagcccaca agtgccggcg aaagttcgcg caaccctgct ggcaggcatt cgcgccgccg
     8041 tgctctggca ccaggtcggc ggcggacgtc tgcaactgat gttttctcgt aatcgcctga
     8101 ccactcaggc aaaacaaatt cttgctcatt taaccccgga gttgtgatct atggaattat
     8161 cctcactgac cgccgtttcc cctgtcgatg gacgctacgg cgataaagtc agcgcgctgc
     8221 gcgggatttt cagcgaatat ggtttgctga aattccgtgt acaagttgaa gtacgttggc
     8281 tgcaaaaact ggccgcgcac gcagcgatca aggaagttcc tgcttttgct gccgacgcaa
     8341 tcggttacct tgatgcaatt gtcgccaatt tcagcgaaga agatgccgca cgcatcaaaa
     8401 ccatcgagcg taccactaac cacgacgtta aagcggttga gtatttcctg aaagaaaaag
     8461 tggcggagat cccggaactg cacgcggttt ctgaattcat ccactttgcc tgtacttcgg
     8521 aagatatcaa taacctctcc cacgcattaa tgctgaaaac cgcgcgtgat gaagtgatcc
     8581 tgccgtactg gcgtcaactg attgatggca ttaaagatct cgccgttcag taccgcgata
     8641 tcccgctgct gtctcgtacc cacggtcagc cagccacgcc gtcaaccatc ggtaaagaga
     8701 tggcaaacgt cgcctaccgt atggagcgcc agtaccgcca gcttaaccag gtggagatcc
     8761 tcggcaaaat caacggcgcg gtcggtaact ataacgccca catcgccgct tacccggaag
     8821 ttgactggca tcagttcagc gaagagttcg tcacctcgct gggtattcag tggaacccgt
     8881 acactaccca gattgaaccg cacgactaca ttgccgaact gtttgattgc gttgcgcgct
     8941 tcaacaccat tctgatcgac tttgaccgtg acgtctgggg ttatatcgcc cttaaccact
     9001 tcaaacagaa aaccattgct ggtgagattg gttcttccac catgccgcat aaagttaacc
     9061 cgatcgactt cgagaactcc gaagggaatc tgggcctttc caacgcggta ttacagcatc
     9121 tggcaagcaa actgccggtt tcccgctggc agcgtgacct gaccgactcc accgtgctgc
     9181 gtaacctcgg cgtgggtatc ggttatgcgc tgattgcgta tcaatccacc ctgaaaggcg
     9241 tgagcaaact ggaagtgaac cgtgaccatc tgctggatga gctggatcac aactgggaag
     9301 tgctggcgga gccaatccag acagttatgc gtcgctatgg catcgaaaaa ccgtacgaga
     9361 agctgaaaga gctgactcgt ggtaagcgcg ttgacgccga aggcatgaag cagtttatcg
     9421 acggtctggc gttgccagaa gaagagaaag cccgcctgaa agcgatgacg ccggcaaact
     9481 acattggtcg cgccatcacc atggttgatg agctgaaata aactcgtatc agtgccggat
     9541 ggcgatgctg tccggcctgc ttattaagat tatccgcttt ttattttttc actttacctc
     9601 ccctccccgc tggtttattt aatgtttacc cccataacca cataatcgcg ttacactatt
     9661 ttaataatta agacagggag aaataaaaat gcgcgtactg gttgttgaag acaatgcgtt
     9721 gttacgtcac caccttaaag ttcagattca ggatgctggt catcaggtcg atgatgcaga
     9781 agatgccaaa gaagccgatt attatctcaa tgaacattta ccggatattg cgattgtcga
     9841 tctcggattg ccagacgagg acggtctgtc actgattcgc cgctggcgta gcaatgatgt
     9901 ttcactgccg attctggtat taaccgcccg tgaaagctgg caggacaaag tcgaagtatt
     9961 aagtgctggt gctgatgatt acgtgactaa accatttcat attgaagagg tgatggcgcg
    10021 aatgcaggca ttaatgcggc gtaatagcgg tctggcttca caggtcattt cgctaccacc
    10081 gtttcaggtt gatctctctc gccgtgaatt atctattaat gacgaagtga tcaaactgac
    10141 cgcgttcgaa tacaccatta tggaaacgtt gatacgcaat aatggcaaag tggtgagcaa
    10201 agattcgtta atgctccaac tctatccgga tgcggagctg cgggaaagcc ataccattga
    10261 tgtactgatg ggacgtctgc gcaaaaaaat tcaggcacaa tatccgcaag aagtgattac
    10321 taccgttcgc ggccagggct atttgttcga attgcgctga tgaaaaaatt actgcgtctt
    10381 tttttcccgc tctcgctgcg ggtacgtttt ctgttggcaa cggctgcggt agtactggtg
    10441 ctttcgcttg cctacggaat ggtcgcgctg atcggttata gcgtcagttt cgataaaact
    10501 acgtttcggc tgttacgtgg cgagagcaat ctgttctata cccttgcgaa gtgggaaaac
    10561 aataagttgc atgtcgagtt acccgaaaat atcgacaagc aaagccccac catgacgcta
    10621 atttatgatg agaacgggca gcttttatgg gcgcaacgtg acgtgccctg gctgatgaag
    10681 atgatccagc ctgactggct gaaatcgaat ggttttcatg aaattgaagc ggatgttaac
    10741 gataccagcc tcttgctgag tggagatcat tcgatacagc aacagttgca ggaagtgcgg
    10801 gaagatgatg acgacgcgga gatgacccac tcggtggcag taaacgtcta cccggcaaca
    10861 tcgcggatgc caaaattaac cattgtggtg gtggatacca ttccggtgga gctaaaaagt
    10921 tcctatatgg tctggagctg gtttatctat gtgctctcag ccaatctgct gttagtgatc
    10981 ccgctgctgt gggtcgccgc ctggtggagt ttacgcccca tcgaagccct ggcaaaagaa
    11041 gtccgcgaac tggaagaaca taaccgcgaa ttgctcaatc cagccacaac gcgagaactg
    11101 accagtctgg tacgaaacct gaaccgattg ttaaaaagtg aacgcgaacg ttacgacaaa
    11161 taccgtacga cgctcaccga cctgacccat agtctgaaaa cgccactggc ggtgctgcaa
    11221 agtacgctgc gttctctgcg tagtgaaaag atgagcgtca gtgatgctga gccggtaatg
    11281 ctggagcaaa tcagccgcat ttcacagcaa attggctact acctgcatcg tgccagtatg
    11341 cgcggcggga cattgctcag ccgcgagctg catccggtcg ccccactgct ggacaatctc
    11401 acctcagcgc tgaacaaagt gtatcaacgc aaaggggtca atatctctct cgatatttcg
    11461 ccagagatca gctttgtcgg tgagcagaac gattttgtcg aggtgatggg caacgtgctg
    11521 gataatgcct gtaaatattg cctcgagttt gtcgaaattt ctgcaaggca aaccgacgag
    11581 catctctata ttgtggtcga ggatgatggc cccggtattc cattaagcaa gcgagaggtc
    11641 attttcgacc gtggtcaacg ggttgatact ttacgccctg ggcaaggtgt agggctggcg
    11701 gtagcccgcg aaatcaccga gcaatatgag ggtaaaatcg tcgccggaga gagcatgctg
    11761 ggcggtgcgc ggatggaggt gatttttggt cgccagcatt ctgcgccgaa agatgaataa
    11821 atatgtccat acttcacgca ttacgttaag catccgttat aatcggttgc agataccagc
    11881 ctgtggatgc ttaacatgga ataccaactc actcttaact ggcccgattt tcttgaacgt
    11941 cactggcaga aacgcccggt ggtgttaaaa cgcggcttta ataattttat tgacccgatc
    12001 tctccagacg agttggcggg tctggcgatg gaaagcgaag ttgacagtcg actggtcagt
    12061 caccaggatg gcaaatggca ggtcagccac ggcccgttcg aaagctacga tcatctcggt
    12121 gaaaccaact ggtcattact ggtacaggca gtgaaccact ggcatgagcc gaccgccgcg
    12181 ctgatgcgac cgttccgtga actaccggac tggcgtattg atgatctgat gatttctttt
    12241 tctgtacctg gcggcggcgt cggcccgcat ctcgatcagt acgacgtgtt tatcattcag
    12301 ggtaccggac gtcgtcgctg gcgagtgggc gaaaagctgc aaatgaaaca gcactgccca
    12361 catccggatc tgttacaggt cgatccgttc gaagccatca tcgatgaaga gctggagcct
    12421 ggtgatattc tttatattcc gccaggattc ccgcatgaag gctacgcgct ggaaaatgcg
    12481 atgaactatt ccgtgggctt tcgcgcgcca aatacgcggg aactgattag tggatttgcc
    12541 gattatgtgc tgcaacgtga actgggcggc aactactaca gcgatcctga tgttccacct
    12601 cgcgctcatc ctgcggatgt tctgcctcaa gagatggata aactgcgtga gatgatgctc
    12661 gaattgatca accagccgga acactttaag caatggtttg gcgagtttat atcccagtca
    12721 cgtcatgaac tggatatcgc gccgccggaa ccgccttatc agccagatga aatctacgat
    12781 gcgctgaaac aaggtgatgt gctggtgcgc ctgggtggtc tgcgcgtatt gcgcattggc
    12841 gacgacgtgt atgccaatgg tgagaagatc gattccccgc accgtccggc actggatgca
    12901 ctcgccagca acattgcgct gactgcggag aattttggcg atgcgctgga agatccgtca
    12961 ttcctcgcga tgctcgcggc gctggtcaat agcgggtatt ggttcttcga agggtaagtt
    13021 tggatttaag ccggatgcgg catcacatgc cgcatccctt ttcgcttact tccgttgcgc
    13081 cgttaactcg gcaatacgga cgatcacctg caccgctttt tccatacctt ccagagtcac
    13141 aaactcatgc ttaccatgat agttgtaacc gccagtgaac aagttcgggc acggtaatcc
    13201 cataaacgac aactgcgcgc cgtcggtacc gccgcggatc ggtttcagtt ccggttcaat
    13261 atcgcagtca cgcatcgcct gctgggcgat atcgagaata tgcggatgct caaccacttt
    13321 ctcgcgcata ttgtagtaac tgtcttcaat caccagttca atgtagcaat caggatgtaa
    13381 ccctttgccc acttttttgg cgatctccat cattttacat ttacgcgctt caaactgttt
    13441 acggtcgaaa tcacggatga tgtagtgcat atcggcccgt tcaacggtgc ctttcatgcc
    13501 cgccaggtga tagaaacctt catagccttc tgtcatttcc gggctttcat ccgccggaac
    13561 ttccgcatga atacgtgccg ccagcgacag cgcatttacc atcactcctt tcgccgtgcc
    13621 cggatgaaca ttgttaccga caattttgat attgaccgat gcggcgttga agttttcaaa
    13681 ctccagttcg cctacgccac caccgtcaac agtgtaagcc cagcgggcat cgaaggcatc
    13741 aacatcaaaa tgtttcgccc ctttgcccac ttcttcatcc ggggtaaagg cgacgcgaat
    13801 atcaccatgc ggaatgtttt tctgttgcaa taccgccagc gcggtcatga tttctgcaat
    13861 acctgctttg tcatcggcac ctaacaaggt tttaccatcg gtggtaatca acgtctgacc
    13921 cagtagctga tgcagcaccg ggaacataac cggtgataaa acttcatcgc cgatacccag
    13981 cgcaatatcg ccaccgcgat agttttcaac aatttgcgga ttaacatttt tgccgctgca
    14041 atccggtgag gtatccacat gagaaataaa gccaatcgcc gggatatcgc cagggacgtt
    14101 agccggtaac gtcgccatca aagtgccctt ctcacttaag gtcacattga taagccccat
    14161 ttcttcgagc tgctctttca gcagatgcaa taacttccat tggccttccg tgctgggaac
    14221 ctgtctcacc cctgcttttg attgggtatc cagagacacg tagttcaaaa atcgctcaag
    14281 tagtttatcc atgtagtcac cctcactttt tgtgacaaca ttattaagaa gcaagaaaag
    14341 acaaatattg cgtcaggtca cttttacccc tgcaagcggg aatatttatc agcattacct
    14401 taatgaatat aaagctaagc cagtaattca caacaaagat tggcgattca agcggtttgc
    14461 cgtagaatta ccgccctcat taagagtcac caaggtggtt aaccacaaac cccgcatcgg
    14521 taagccatcc gttgcgttta catgggacag agtaaaaaat tgaataaaca accgagttcg
    14581 ctttcaccgc tggtgcaatt ggcgggaatt cgcaaatgct ttgatggtaa agaggtcatt
    14641 ccccagctgg atctgactat caacaatggc gagttcctca cgctgcttgg cccttctggc
    14701 tgcggtaaaa caaccgttct tcgcctgatt gcaggtctgg aaactgttga ttccggacgc
    14761 atcatgctgg ataacgagga catcacccac gttccggcgg aaaaccgcta tgtgaacact
    14821 gttttccaaa gctacgcact tttcccccac atgaccgtgt tcgaaaatgt ggcctttggg
    14881 ttgcgcatgc aaaaaacccc cgctgctgaa attacgcccc gcgtgatgga agccctgcgg
    14941 atggtgcaac tggaaacctt cgctcaacgt aaaccgcatc agctctctgg tggtcaacag
    15001 caacgcgtcg ccattgctcg cgcggtggtt aacaagcctc gtctgttgtt gctggatgag
    15061 tcgctctcag cgctggatta caaactgcgt aagcaaatgc agaacgagct gaaagcgtta
    15121 cagcgtaagc ttggcattac attcgtcttc gtgactcacg accaggaaga agcactcacc
    15181 atgtcagaca ggattgtggt gatgcgcgag ggtcgcattg agcaagacgg cacgccgcgt
    15241 gaaatctacg aagagccgaa aaacctgttt gttgccggct tcattggcga aattaatatg
    15301 tttaacgcca cggtgatcga gcgactcgac gagcagcgcg tacgcgccaa cgttgaaggc
    15361 cgcgaatgta atatctacgt taacttcgcc gttgaaccgg ggcaaaaact gcatgttctg
    15421 ctgcgcccgg aagacttacg tgttgaagag attaacgacg acaaccacgc tgaagggctg
    15481 attggttacg ttcgtgagcg taactacaaa ggcatgacgc tggagtcggt tgttgaactg
    15541 gaaaatggca agatggtgat ggtcagcgaa ttcttcaatg aagacgatcc tgactttgac
    15601 cactctctcg accaaaaaat ggccattaat tgggtagaaa gctgggaggt cgtactggct
    15661 gatgaagaac acaagtaagt tccagaatgt agtgattgtc actattgtcg gttggcttgt
    15721 gttgtttgtc tttctgccca acctgatgat cattggcacc agctttttga cccgcgacga
    15781 cgccagtttc gtcaaaatgg tcttgacgct ggataactac acgcgtctgc tcgatccgct
    15841 ctattttgaa gtgctattgc actcgctgaa tatggcgctg atcgccaccc tcgcctgcct
    15901 ggtgctgggc tatccatttg cctggtttct ggcgaagctg ccacacaagg tgcgtccgct
    15961 gctgctgttt ctgctgattg ttccgttctg gaccaactca ttgattcgta tctacgggct
    16021 gaaaattttc ctcagcacca aaggctatct caacgagttt ttgctctggc tgggcgttat
    16081 cgacacacca atccgtatca tgttcacgcc cagtgcggtg attatcggtc tggtttacat
    16141 tctgctgccg tttatggtga tgccgctgta ctccagtatc gaaaaactgg ataagccgtt
    16201 gcttgaggcg gcgcgcgatc tcggtgccag caagttacag acttttatcc gcatcattat
    16261 tccactgacg atgccgggga ttattgccgg atgtctgctg gtgatgctgc cagcgatggg
    16321 cctgttctat gtgtccgacc tgatgggcgg tgcgaaaaac ctgctgatcg gtaacgtcat
    16381 caaggtacag ttcctcaata ttcgtgactg gccgtttggt gcagccacca gcattacgct
    16441 gactatcgta atgggcctga tgttgctggt ttactggcgc gcttctcgtt tgctgaataa
    16501 gaaggtgagc gaattagatg attaatcatt tatattcaat gcattaagtt tgtttttgag
    16561 tggttttgcc gtttaaggta acggcgttat agatcctatc aaaatcaatc aattccattc
    16621 tggttttgga gaaagatttt tcgagagctt cggtctttaa ctaaaactga ttgcgtataa
    16681 ccccaatacc cctccccgac tatctgaatg gtcggggagg cacttcacgc acaaaatatc
    16741 atccctgcgc cgttgattac tctgcaggtg aagtcggcca ctcaatatca ggtgcagttg
    16801 atgtatcaac acggttcagc aa
//
LOCUS       DADMHC010000076        16690 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.076, whole genome shotgun sequence.
ACCESSION   DADMHC010000076 DADMHC010000000
VERSION     DADMHC010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16690)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16690)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16690
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.076"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(75..1436)
                     /locus_tag="JNZ57_002093"
     CDS             complement(75..1436)
                     /locus_tag="JNZ57_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit EutB"
                     /protein_id="HAY8828319.1"
                     /translation="MKLKTTLFGNVYQFKDVKEVLAKANELRSGDVLAGVAAASSQER
                     VAAKQVLSEMTLADIRNNPVIAYEDDCVTRLIQDDVNETAYNQIKNWSISELREYVLS
                     DETSVDDIAFTRKGLTSEVVAAVAKICSNADLIYGAKKMPVIKKANTTIGIPGTFSAR
                     LQPNDTRDDVQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNI
                     PTQGCVLAHVTTQIEAIRRGAPGGLIFQSICGSEKGLKEFGVELAMLDEARAVGAEFN
                     RIAGENCLYFETGQGSALSAGANFGADQVTMEARNYGLARHYDPFIVNTVVGFIGPEY
                     LYNDRQIIRAGLEDHFMGKLSGISMGCDCCYTNHADADQNLNENLMILLATAGCNYIM
                     GMPLGDDIMLNYQTTAFHDTATVRQLLNLRPSPEFERWLESMGIMANGRLTKRAGDPS
                     LFF"
     gene            complement(1448..2851)
                     /gene="eutA"
                     /locus_tag="JNZ57_002094"
     CDS             complement(1448..2851)
                     /gene="eutA"
                     /locus_tag="JNZ57_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase reactivating factor
                     EutA"
                     /protein_id="HAY8828320.1"
                     /translation="MNTRQLLSVGIDIGTTTTQVIFSHLELVNRAAVSQVPRYEFIKR
                     EISWQSPVFFTPVDKQGGLEEAELKSLILEQYQAAGIAPESVDSGAIIITGESAKTRN
                     ARPAVMALSQSLGDFVVASAGSHLESVIAGHGAGAQTLSEQRLCRVLNIDIGGGTANY
                     ALFDAGKISGTACLNVGGRLLETDSQGRVVYAHKPGQMIVDECFGAGTDVRSLTGAQL
                     VQVTRRMAELIVEVIDGTLSPLAQALMQTGLLPAGVTPEIITLSGGVGECYRHQPADP
                     FCFADIGPLLATALHDHPRLREMNVQFPAQTVRATVIGAGAHTLSLSGSTIWLEGVQL
                     PLRNLPVAIPIDETDLVSAWQQALLQLDLDPKTDAYVLALPASLPVRYAAVLTVINAL
                     VDFVARFPNPHPLLVVAGQDFGKALGMLLRPQLQQLPLAVIDEVIVRAGDYIDIGTPL
                     FGGSVVPVTVKSLAFPS"
     gene            complement(2848..4074)
                     /gene="eutH"
                     /locus_tag="JNZ57_002095"
     CDS             complement(2848..4074)
                     /gene="eutH"
                     /locus_tag="JNZ57_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization protein EutH"
                     /protein_id="HAY8828321.1"
                     /translation="MGINEIIMYIMMFFMLIAAVDRILSQFGGSASFLGKFGKSIEGS
                     GGQFEEGFMAMGALGLAMVGMTALAPVLAHVLGPVIIPVYEMLGANPSMFAGTLLACD
                     MGGFFLAKELAGGDVAAWLYSGLILGSMMGPTIVFSIPVALGIIEPSDRRYLALGVLA
                     GIVTIPIGCIVGGLVAMYSGVQINGQPVEFTFALILMNMIPVIIVAILVALGLKFIPE
                     KMINGFQIFAKFLVALITLGLAAAVVKFLLGWELIPGLDPIFMAPGDKPGEVMRAIEV
                     IGSISCVLLGAYPMVLLLTRWFEKTLMSVGKVLNMNNIAAAGMVATLANNIPMFGMMK
                     QMDTRGKVINCAFAVSAAFALGDHLGFAAANMNAMIFPMIVGKLIGGVTAIGVAMMLV
                     PKDDATAAKTEAEAQS"
     gene            complement(4291..5478)
                     /gene="eutG"
                     /locus_tag="JNZ57_002096"
     CDS             complement(4291..5478)
                     /gene="eutG"
                     /locus_tag="JNZ57_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311342.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization ethanol dehydrogenase
                     EutG"
                     /protein_id="HAY8828322.1"
                     /translation="MQNELQTALFQAFDTLNLQRVKTFSVPPVTLCGPGSVSSCGQQA
                     QTRGLKHLFVMADSFLHQAGMTAGLTRSLAVKGIAMTLWPCPVGEPCITDVCAAVAQL
                     RESGCDGVIAFGGGSVLDAAKAVALLVTNPDSTLAEMSETSVLQPRLPLIAIPTTAGT
                     GSETTNVTVIIDAVSGRKQVLAHASLMPDVAILDAALTEDVPSHVTAMTGIDALTHAI
                     EAYSALNAIPLTDSLAIGAIAMIGKSLPKAVGYGHDLAARESMLLASCMAGMAFSSAG
                     LGLCHAMAHQPGAALHIPHGLANAMLLPTVMEFNRMVCRERFSQIGRALRTKKSDDRD
                     AINAVSELIAEVGIGKRLGDVGATSAHYGAWAQAALEDICLRSNPRTASLEQIVGLYA
                     AAQ"
     gene            complement(5468..6304)
                     /gene="eutJ"
                     /locus_tag="JNZ57_002097"
     CDS             complement(5468..6304)
                     /gene="eutJ"
                     /locus_tag="JNZ57_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization protein EutJ"
                     /protein_id="HAY8828323.1"
                     /translation="MAHDEQWLTPRLQTAATLCNQTPAATESPLWLGVDLGTCDVVSM
                     VVDRDGQPVAVCLDWADVVRDGIVWDFFGAVTIVRRHLDTLEQQFGRRFSHAATSFPP
                     GTDPRISINVLESAGLEVSHVLDEPTAVADLLQLDNAGVVDIGGGTTGIAIVKKGKVT
                     YSADEATGGHHISLTLAGNRRISLEEAEQYKRGHGEEIWPTVKPVYEKMADIVARHIE
                     GQGITDLWLAGGSCMQPGVAELFRKQFPALQVHLPQHSLFMTPLAIASSGREKAEGLY
                     AK"
     gene            complement(6315..7718)
                     /locus_tag="JNZ57_002098"
     CDS             complement(6315..7718)
                     /locus_tag="JNZ57_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase EutE"
                     /protein_id="HAY8828324.1"
                     /translation="MNQQDIEQVVKAVLLKMQSSDTPPAAVHEMGVFASLDDAVAAAK
                     VAQQGLKSVAMRQLAIAAILEAGEKHARDLAELAVSETGMGRVEDKFAKNVAQARGTP
                     GVECLSPQVLTGDNGLTLIENAPWGMVASVTPSTNPAATVINNAISLIAAGNSVIFAP
                     HPAAKKVSQRAITLLNQAIVAAGGPENLLVTVANPDIETAQRLFKFPGIGLLVVTGGE
                     AVVEAARKHTNKRLIAAGAGNPPVVVDETADLARAAQSIVKGASFDNNIICADEKVLI
                     VVDSVADELMRLMEGQHAVKLTAEQAQQLQPVLLKNIDERGKGTVSRDWVGRDAAKIA
                     AAIGLNVPQETRLLFVETTAEHPFAVTELMMPVLPVVRVANVADAIALAVKLEGGCHH
                     TAAMHSRNIENMNQMANAIDTSIFVKNGPCIAGLGLGGEGWTTMTITTPTGEGVTSAR
                     TFVRLRRCVLVDAFRIV"
     gene            complement(7730..8017)
                     /gene="eutN"
                     /locus_tag="JNZ57_002099"
     CDS             complement(7730..8017)
                     /gene="eutN"
                     /locus_tag="JNZ57_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutN"
                     /protein_id="HAY8828325.1"
                     /translation="MKLAVVTGQIVCTVRHHGLAHDKLLMVEMIDPQGNPDGQCAVAI
                     DNIGAGTGEWVLLVSGSSARQAHKSETSPVDLCVIGIVDEVVSGGQVIFHK"
     gene            complement(8124..8417)
                     /gene="eutM"
                     /locus_tag="JNZ57_002100"
     CDS             complement(8124..8417)
                     /gene="eutM"
                     /locus_tag="JNZ57_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutM"
                     /protein_id="HAY8828326.1"
                     /translation="MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAM
                     VRGDVAACKAATDAGAAAAQRIGELVSVHVIPRPHGDLEEVFPIGLKGDSSNL"
     gene            complement(8456..9472)
                     /gene="pta"
                     /locus_tag="JNZ57_002101"
     CDS             complement(8456..9472)
                     /gene="pta"
                     /locus_tag="JNZ57_002101"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HAY8828327.1"
                     /translation="MIIERCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPIL
                     VANPFELRQFALSHGVAMDGLQVIDPHGNLAMREEFAHRWLARAGEKTPPDALEKLTD
                     PLMFAAAMVSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSFIFLMLPQYSGP
                     ALGFADCSVVPQPTAAQLADIALASAETWRAITGEEPRVAMLSFSSNGSARHPCVANV
                     QQATEIVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIG
                     YNIAQRLGGYRAVGPLIQGLAVPMHDLSRGCSVQDIIELALVAAVPRQTEVNRESSLQ
                     TLVE"
     gene            complement(9462..10271)
                     /gene="eutT"
                     /locus_tag="JNZ57_002102"
     CDS             complement(9462..10271)
                     /gene="eutT"
                     /locus_tag="JNZ57_002102"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001425897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization cob(I)yrinic acid
                     a,c-diamide adenosyltransferase EutT"
                     /protein_id="HAY8828328.1"
                     /translation="MKDFITEAWLRANHTLSEGAEIHLPADSRLTPSARELLESRHLR
                     IKFIDEQGRLFVDDEQQQPQPVHGLTSSDEHPQACCELCRQPVAKKPDTLTHLSAEKM
                     VAKSDPRLGFRAVLDSTIALAVWLQIELAEPWQPWLADIRSRLGNIMRADALGEPLGC
                     QAIVGLSDEDLHRLSHQPLRYLDHDHLVPEASHGRDAALLNLLRTKVRETETVAAQVF
                     ITRSFEVLRPDILQALNRLSSTVYVMMILSVTKQPLTVKQIQQRLGERNDY"
     gene            complement(10268..10969)
                     /gene="eutQ"
                     /locus_tag="JNZ57_002103"
     CDS             complement(10268..10969)
                     /gene="eutQ"
                     /locus_tag="JNZ57_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization acetate kinase EutQ"
                     /protein_id="HAY8828329.1"
                     /translation="MKKLITANDIREAHARGEQAMSVVLRASIITPEAREVADLLGFT
                     ITECDESIPVTASVPASVPADKTESQRIRETIIAQLPEGQFTESLVAQLMEKVMKEKQ
                     SLEQGAMQPSFKSVTGKGGIKVIDGSSVKFGRFDGAEPHCVGLTDLVTGDDGSSMAAG
                     FMQWENAFFPWTLNYDEIDMVLEEELHVRHEGQTMIAKAGDVMFIPKGSSIEFGMTSS
                     VKFLYVAWPANWQSL"
     gene            complement(10944..11423)
                     /gene="eutP"
                     /locus_tag="JNZ57_002104"
     CDS             complement(10944..11423)
                     /gene="eutP"
                     /locus_tag="JNZ57_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization acetate kinase EutP"
                     /protein_id="HAY8828330.1"
                     /translation="MKRIAFVGSVGAGKTTLFNALQGNYTLARKTQAVEFNDKGDIDT
                     PGEYFSHPRWYHALITTLQDVDMLIYVHGANDPESRLPAGLLDIGVSKRQIAVISKTD
                     MPDADVAATRKLLLETGFEEPIFELNSHDPQSVQQLVDYLASLTKQEEAGEKTHHSE"
     gene            complement(11436..11771)
                     /gene="eutS"
                     /locus_tag="JNZ57_002105"
     CDS             complement(11436..11771)
                     /gene="eutS"
                     /locus_tag="JNZ57_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311351.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutS"
                     /protein_id="HAY8828331.1"
                     /translation="MDKERIIQEFVPGKQVTQAHLIAHPGEELAKKIGVPDAGAIGIM
                     TLTPGETAMIAGDLALKAADVHIGFLDRFSGALVIYCSVGAVEEALSQTVSGLGRLLN
                     YTLCEMTKS"
     gene            complement(12064..14343)
                     /gene="maeB"
                     /locus_tag="JNZ57_002106"
     CDS             complement(12064..14343)
                     /gene="maeB"
                     /locus_tag="JNZ57_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxaloacetate-decarboxylating
                     malate dehydrogenase"
                     /protein_id="HAY8828332.1"
                     /translation="MDDQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVA
                     APCLEIEKDPLKAYKYTARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFA
                     GIDVFDIEVDELDPDKFIEVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFH
                     DDQHGTAIISTAAILNGLRVVEKNISDVRMVVSGAGAAAIACMNLLVALGLQKHNIVV
                     CDSKGVIYQGREPNMAETKAAYAVVDDGKRTLDDVIEGADIFLGCSGPKVLTQEMVKK
                     MARAPMILALANPEPEILPPLAKEVRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDV
                     GATAINEEMKLAAVRAIAELAHAEQSEVVASAYGDQDLSFGPEYIIPKPFDPRLIVKI
                     APAVAKAAMESGVATRPIADFDVYIDKLTEFVYKTNLFMKPIFSQARKAPKRVVLPEG
                     EEARVLHATQELVTQGLAKPILIGRPNVIEMRIQKLGLQIKAGVDFEIVNNESDPRFK
                     EYWTEYFQIMKRRGVTQEQAQRALISNPTVIGAIMVQRGEADAMICGTVGDYHEHFSV
                     VKNVFGYRDGVHTAGAMNALLLPSGNTFIADTYVNDEPDAEELAEITLMAAETVRRFG
                     IEPRVALLSHSNFGSSDCPSSSKMRQALELVRDRAPDLMIDGEMHGDAALVEAIRNDR
                     MPDSPLKGSANILVMPNMEAARISYNLLRVSSSEGVTVGPVLMGVAKPVHVLTPIASV
                     RRIVNMVALAVVEAQTQPL"
     gene            14632..15582
                     /gene="tal"
                     /locus_tag="JNZ57_002107"
     CDS             14632..15582
                     /gene="tal"
                     /locus_tag="JNZ57_002107"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HAY8828333.1"
                     /translation="MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGL
                     SQYEHLIDDAIAWGKKNGKTQEQQVVAACDKLAVNFGAEILKIVPGRVSTEVDARLSF
                     DKEKSIEKARHLVDLYQQQGVEKSRILIKLASTWEGISAAEELEKEGINCNLTLLFSF
                     AQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQHHYE
                     TIVMGASFRRTEQILALTGCDRLTIAPNLLKELQEKVSPVVRKLIPPSQTFPRPAPMS
                     EAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL"
     gene            15602..>16690
                     /locus_tag="JNZ57_002108"
     CDS             15602..>16690
                     /locus_tag="JNZ57_002108"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416960.1"
                     /note="catalyzes the formation of ribose 5-phosphate and
                     xylulose 5-phosphate from sedoheptulose 7-phosphate and
                     glyceraldehyde 3-phosphate; can transfer ketol groups
                     between several groups; in Escherichia coli there are two
                     tkt genes, tktA expressed during exponential growth and
                     the tktB during stationary phase; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HAY8828334.1"
                     /translation="MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFL
                     KHNPTDPTWYDRDRFILSNGHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEI
                     GYTPGVETTTGPLGQGLANAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEG
                     ISHEVCSLAGTLGLGKLIGFYDHNGISIDGETEGWFTDDTAKRFEAYHWHVIHEIDGH
                     DPQAVKEAILEAQSVKDKPSLIICRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKL
                     GWHHPPFEIPKEIYHAWDAREKGEKAQQSWNEKFAAYKKAHPQLAEEFTRRMSGGLPK
                     DWEKTTQKYINELQANPAKIATRKASQNT"
BASE COUNT         3746 a         4845 c         4364 g         3735 t
ORIGIN      
        1 tcccattgac gccatcacgc tgcgtacaat ttcttcaatc tgtttttgat ccatgatgtg
       61 ttatctccgc gtcatcagaa gaacagtgac ggatcgcccg cccgtttggt caggcgaccg
      121 tttgccataa tgcccatgct ttccagccag cgttcaaact ctggtgacgg gcgcaggttg
      181 agtaactgac gcacagtggc ggtatcgtgg aatgcggtgg tctggtagtt gagcatgatg
      241 tcatcaccca gcggcatccc catgatgtag ttgcagcctg cggtggcgag caggatcatc
      301 aggttttcgt tgaggttctg gtcagcgtca gcgtggttgg tgtagcagca gtcacagccc
      361 atagagatgc cgctcagctt gcccataaag tgatcttcta agccagcacg gataatctgg
      421 cggtcgttgt agagatactc cggcccaata aagccgacca cggtgttgac gataaacgga
      481 tcgtaatgac gcgccagccc atagttacgt gcttccatcg tcacctggtc agcgccgaag
      541 ttagcgccag cggatagcgc agagccttgt ccggtttcga aatagaggca gttttccccg
      601 gcgatacggt tgaactctgc acccactgcg cgcgcttcgt cgagcatcgc cagttccacg
      661 ccaaactctt tcagcccttt ttcgctgcca cagatactct ggaaaatcag tccgccaggc
      721 gcgccgcgac gaatcgcttc gatctgggtg gtgacgtgcg ccagtacgca gccctgagtt
      781 gggatgttga atttgtcgat cacgccataa atggtatcca gcacgcggct taagttttcc
      841 acgtcgtcag ttaccgggtt gacgccgatc accgcatcgc ccaccccgaa ggaaagccct
      901 tcgtagattt gcgcggcgat actttgcacg tcgtcacgag tgtcatttgg ctgcaaacgg
      961 gcgctgaagg tgcccggaat accgatggtg gtattggcct ttttgattac cggcattttc
     1021 ttcgcgccgt agatcaggtc cgcgttggag caaatcttcg ctaccgccgc gaccacttcc
     1081 gaggtcagcc ctttgcgggt aaaggcaatg tcgtccacgc tagtttcatc gctcagcaca
     1141 tactcacgca gttcgctgat gctccagttt ttaatctggt tgtaggccgt ttcgttaaca
     1201 tcgtcctgaa tcagccgcgt cacgcagtca tcttcatagg caatcaccgg attattgcgg
     1261 atgtccgcta aggtcatttc cgacaacacc tgctttgccg ccacgcgctc ctgtgaactt
     1321 gccgctgcaa cgcctgccag cacatccccc gaacgcagtt cgttggcttt agccagcacc
     1381 tcttttacat ccttaaactg atatacattg ccgaacaatg tggtctttag tttcataagt
     1441 cgttccctca ggaaggaaat gcgagtgatt tcaccgtcac cggcacaacc gatccgccaa
     1501 aaagaggcgt accaatgtcg atatagtccc ccgcgcggac aatcacttcg tcaatgactg
     1561 ccaacgggag ttgttgtagc tgtgggcgca acaacatgcc cagagcttta ccaaagtcct
     1621 gcccggccac caccagcagg ggatgcggat tcggaaaacg cgcgacgaaa tcgaccagcg
     1681 cgttgatgac cgtcagtacc gcggcgtaac gcacaggcag cgaggcggga agcgccagca
     1741 cgtacgcgtc agttttggga tcaagatcca gctgaagcag cgcctgttgc caggcactca
     1801 ccagatccgt ttcatcaatt gggatcgcca ccggcaaatt gcgcagcggc agttgtacgc
     1861 cctccagcca gattgtgctg ccagagagcg aaagggtatg tgcgcccgcg ccaatcaccg
     1921 tggcgcgtac ggtttgcgcc ggaaactgca cattcatctc acgcaggcgc ggatggtcat
     1981 gcagcgccgt tgccagcagc gggccaatat cggcaaaaca gaacggatcg gcgggctggt
     2041 ggcgataaca ttcgcccacg ccgccagaaa gcgtaatgat ttcgggcgta acacctgcgg
     2101 gcagcaaacc ggtttgcatt aatgcctgcg cgagcggcga aagcgttccg tcaatcactt
     2161 cgacaatcag ttctgccatc cgccgggtaa cctgcaccag ctgcgcgccg gtcagcgaac
     2221 ggacgtcagt gcctgcaccg aagcactcat ccacaatcat ctgccccggt ttatgagcgt
     2281 aaaccacgcg cccctggctg tcggtttcca gcaggcgacc accgacgttg aggcaggcag
     2341 tgccgctgat ttttccggca tcgaacaggg cgtagttcgc ggtgccaccg ccgatgtcga
     2401 tattcagtac ccgacacagc cgttgttcag aaagggtttg cgccccggca ccgtgaccgg
     2461 cgatcacgga ttcgaggtgc gacccggcgc tggcgacgac aaaatcgccc agcgactgag
     2521 agagcgccat caccgccggg cgagcattgc gggttttcgc gctttcaccg gtgatgatga
     2581 tggcaccaga atcaacgctt tccggcgcaa tgcccgcagc ctgatattgc tctaaaatca
     2641 gcgacttcag ttccgcttct tctaaaccac cctgtttatc gacaggggta aagaacaccg
     2701 ggctttgcca gctaatttcg cgtttgatga attcgtagcg cggcacctgc gacaccgccg
     2761 cacggttaac cagttccagg tgggagaaaa tcacctgggt ggtggtggtg ccgatatcga
     2821 taccgacgct cagtagctgg cgagtgttca cgattgtgcc tccgcttcgg ttttagctgc
     2881 ggtcgcgtca tcttttggca ccagcatcat cgccacgcca atcgccgtta cgccgccgat
     2941 caacttgccg acaatcatcg ggaagatcat ggcattcatg ttggcagcgg cgaaccctaa
     3001 gtggtcgccc agggcgaaag cagcagaaac ggcgaaggcg cagttgatga ctttgccgcg
     3061 ggtatccatc tgcttcatca tgccgaacat cgggatgttg ttggcaagcg ttgccaccat
     3121 gccggctgcc gcgatgttgt tcatattcag cactttaccg acgctcatca gcgttttttc
     3181 aaaccagcga gtcagcagca gcaccatcgg atacgcccct aacagaacgc aggagataga
     3241 accgataact tcaatggcgc gcatcacctc accgggttta tcgccagggg ccataaagat
     3301 aggatccaga ccggggatca gttcccagcc aagcaggaat ttcactaccg cagcggcaag
     3361 accgagggtg atcaatgcaa cgaggaattt ggcgaagatc tggaagccgt tgatcatttt
     3421 ttccgggatg aatttcagcc ccagcgccac cagaatcgca acaatgatca ccgggatcat
     3481 gttcatcagg atcagggcga aagtgaattc caccggctga ccgttgatct gcacaccgga
     3541 gtacatagca accagaccac caacaataca gccaatcgga atggtcacaa tgcccgccag
     3601 cacgccgagc gccagataac gacggtcaga aggttcgata atgccgagcg ccaccggaat
     3661 ggaaaacaca atcgttggcc ccatcatcga cccaagaatt aacccagagt atagccacgc
     3721 tgctacgtcg ccgcccgcca gctctttggc gaggaagaag ccgcccatat cgcacgccag
     3781 cagcgttccg gcgaacattg acgggtttgc gccgagcatt tcgtaaaccg ggataattac
     3841 cggcccgagt acgtgagcca gtaccggtgc cagcgcggtc ataccgacca tcgccagacc
     3901 cagagcgccc attgccataa agccttcttc gaactgaccg cctgatcctt cgatactttt
     3961 accgaactta ccgaggaaac tagcagaacc gccgaactgc gacaggatcc tgtctacggc
     4021 agctatcagc ataaagaaca tcatgatgta catgatgatt tcgttaattc ccatcgcctt
     4081 tactccctgt tagttgttat ttattggcgg atgcggcgta aacgccttat ccgccctaca
     4141 tgtgcaatcc cgaaggccgg atcagacgcg gcaagcgtcg catccggcaa ttgcaccgcg
     4201 ccactggcgg atgcggcgtg aacgccttat ccgccctaca tgtgcaatcc cgtaggctgg
     4261 ataagacgcg gcaagcgtcg catccggcat ttattgcgcc gctgcgtaca ggccgacaat
     4321 ctgctccagg ctggcggtac gcgggttact gcgcagacaa atatcttcca gcgcggcctg
     4381 cgcccatgcg ccgtaatgcg cagatgtcgc accaacatcg cccagtcgtt taccaatccc
     4441 aacttccgca atcagctcac ttaccgcgtt aatagcgtca cgatcgtcgg attttttagt
     4501 tcgcagtgcc cgaccaatct gactaaagcg ttcacgacaa accatccggt taaattccat
     4561 caccgttggc agcaacatgg cgttcgccag accgtgtgga atatgcagcg ccgcgcccgg
     4621 ctgatgcgcc atcgcgtggc acaacccaag acccgcactg gaaaacgcca ttcccgccat
     4681 acatgaagcc agcaacatgc tctcgcgcgc ggcaaggtcg tgaccgtagc ccaccgcttt
     4741 cggcagcgat ttgccaatca tcgcaatagc gccaatcgcc aggctgtcgg taagcggtat
     4801 agcgttcagg gcgctgtatg cttcaatggc atgggttaac gcatcaatgc cggtcatcgc
     4861 cgtgacatgc gacggcacat cttcggtcaa tgcggcgtcg aggatcgcca catccggcat
     4921 cagcgaggca tgggctaaca cctgcttgcg cccgctcacc gcgtcgataa tcaccgttac
     4981 attggtggtt tcagagccgg ttccggcggt cgttggaatg gcaatcagcg gcaagcgcgg
     5041 ttgcagaacg ctggtttctg acatctctgc cagcgtgcta tccgggttcg tcaccagcaa
     5101 cgccacggct ttcgccgcat ccagcaccga gccgccgcca aatgcgatca ccccatcaca
     5161 gcctgactca cgcaactgcg ccacggctgc acacacgtcg gtgatgcacg gttcgcccac
     5221 cggacatggc cagagcgtca tggcgatgcc tttaacagcc aggctgcgcg tcagcccggc
     5281 ggtcatccct gcctgatgca aaaagctgtc tgccatcacg aacagatgtt tcagcccacg
     5341 cgtttgcgct tgctgtccgc aactgctcac cgagcccgga ccgcaaagcg tcaccggtgg
     5401 aacgctaaat gtttttaccc gttgcagatt cagggtatcg aacgcctgaa agagcgcggt
     5461 ctgcaattca ttttgcatat agcccctccg ctttctctcg cccactactg gcgatcgcca
     5521 gcggggtcat aaacaaactg tgctgcggta aatgcacctg taacgccggg aattgtttgc
     5581 gaaacagttc cgccacgccc ggttgcatac aagagccgcc cgccagccat aaatcagtaa
     5641 tgccctgccc ttcaatatgc cgggcgacaa tgtccgccat tttttcgtac accggtttca
     5701 ccgtaggcca aatctcttca ccgtgaccgc gcttgtactg ctccgcctct tccagcgaaa
     5761 tacggcgatt tccggcgaga gtcagagaga tgtgatgtcc gccggttgct tcatccgccg
     5821 agtacgtcac cttgcccttt ttcacgatgg caatgccggt agtgccgccg ccgatatcca
     5881 ctacaccggc gttgtccagt tgcagcagat ccgcaactgc ggttggctca tccagcacat
     5941 ggctcacttc cagtccagca gactccagca cgttgatgga aatacgcggg tccgtacctg
     6001 gaggaaatga agtcgccgca tggctaaaac ggcgaccgaa ttgctgctcg agcgtgtcga
     6061 gatggcgacg aacaatggtg acagcgccga agaaatccca gacgatgccg tcgcggacca
     6121 catcggccca gtcgaggcat accgccaccg gctgaccgtc gcggtcgaca accatcgaca
     6181 ccacatcgca ggtgcccaga tccaccccca gccacagcgg agattccgtc gcggcgggcg
     6241 tctggttaca cagcgttgcc gccgtttgca gacgtggggt gagccattgt tcgtcgtgcg
     6301 ccatctgtta ctccttaaac aatgcgaaac gcatcgacta atacacagcg acgcagacgg
     6361 acaaacgtac gcgcgctggt taccccttca ccggttggcg tggtgatggt catggtggtc
     6421 cagccttccc cgcccagccc cagcccggca atgcacggtc cgttcttaac gaaaatgctg
     6481 gtatcaatag cattcgccat ctggttcatg ttttcgatgt tgcgcgagtg cattgccgcc
     6541 gtgtggtggc aaccgccttc cagtttcacc gccagcgcaa tggcatccgc cacgttggcg
     6601 acgcgcacga cgggcagcac cggcatcatc agttcggtca cggcaaacgg atgttctgca
     6661 gtggtttcca caaacagcaa acgcgtttct tgcggcacgt tcaggccgat tgccgccgcg
     6721 attttcgccg catcgcgacc aacccagtca cggctgacgg tgccttttcc gcgctcgtcg
     6781 atatttttca gcaacaccgg ttgcagctgc tgcgcctgtt ctgcggtcag tttcaccgcg
     6841 tgctggcctt ccatcagacg catcagttca tcggctacgc tatcaacaac aatcagtacc
     6901 ttttcgtcgg cacaaatgat gttgttatcg aaagaagcgc ctttgacgat ggactgagcg
     6961 gcacgggcga ggtcggcggt ttcatccacc actaccggcg ggttgccagc gcctgcggca
     7021 atcagacgtt tattggtgtg tttacgcgcc gcttctacta ccgcttcgcc gccggtcacc
     7081 accagaaggc cgatgcccgg aaacttgaac aaacgctgcg cggtttcgat atccggattt
     7141 gccacagtaa ccagtaagtt ttccggcccg cctgcggcaa caatcgcctg gttgagcagc
     7201 gtgatcgccc gctgggagac ttttttcgcc gccggatgcg gggcaaaaat gacgctgttg
     7261 cccgcggcaa tcaggctgat ggcgttatta attacggttg ccgccgggtt agtggacgga
     7321 gttaccgaag ccaccatgcc ccagggcgcg ttttcaatta aagtcaggcc gttgtcgccg
     7381 gtcagcacct gcggagagag acactcaacg cctggcgtgc cgcgcgcctg agcgacgttt
     7441 ttggcaaatt tatcttcaac gcggcccatg ccggtttcac tgacggcaag ttccgctaaa
     7501 tctctggcgt gtttttcgcc tgcctcaaga atggcagcaa tggctaactg gcgcattgcc
     7561 acgcttttta acccttgctg ggcgactttg gctgccgcaa cggcgtcatc cagggacgcg
     7621 aaaacgccca tctcatgaac ggcggcgggc ggcgtgtcac tgctttgcat tttcagcagt
     7681 accgctttca ccacctgttc aatatcctgt tgattcatga tgttctgcct tatttgtgga
     7741 aaattacctg accgccagac accacctcat cgacaatgcc aatcacgcac agatcgaccg
     7801 gtgacgtttc gcttttatgc gcctggcggg cggaactgcc actcaccagt aacacccact
     7861 ccccggttcc cgcaccaata ttgtcgatgg cgacggcgca ttgcccgtca ggattacctt
     7921 gtggatcaat catttccacc atcagcaatt tgtcatgcgc cagtccgtga tggcgtacgg
     7981 tacaaacaat ttgtccagtg acgactgcca gtttcatacc cgcctccgtg gcgtatttca
     8041 ggtaaaagct ccccctaccc tccgcagaag gtaaaatgaa aaaggagaga gcgtgacgcc
     8101 cgaatcgacg tcacacaggg tgattacagg ttgctgctat cgcctttcag gccgatcggg
     8161 aagacttctt ccaggtcgcc gtgcggacgc gggataacgt gtacagatac cagctcgccg
     8221 atacgctgtg ccgctgcggc acctgcatcg gtcgcggctt tacaggctgc aacatcacca
     8281 cgaaccatgg cagtacacag gccgccgcca atctgcttaa caccaaccag cttgacgcgc
     8341 gcagctttca ccatcgcgtc agaagcctca atcagtgcaa ccaggccccg ggtttcgatc
     8401 attcctaatg cttccattgt gctttcctct ttatcagggt ccagaacggg accgttcatt
     8461 caaccagtgt ttgtaaactg ctttcgcggt tcacttctgt ctgacgcggc acagctgcca
     8521 ccagcgccag ctcgataatg tcctgcacgc tacaaccacg agagagatcg tgcatcggca
     8581 cggcaagtcc ttgtatcagt ggcccgacgg cacgatatcc gccgagtcgt tgtgcgatgt
     8641 tgtaaccaat atttccggct tccagcgacg gaaaaaccat cacattggcc ttgccctgta
     8701 gcgggctggc aggcgctttt tgcgccgcca cttccggcac gaaggcggcg tcaaactgta
     8761 actcgccatc caccaccagc tttggtgcgc gctcacggac gatttctgtc gcctgctgga
     8821 cgttagcaac acaggggtga cgggcgctac cattgctgga aaacgacagc atcgccacgc
     8881 gcggctcttc tccggtgatg gcgcgccagg tttcggcact ggcaagcgcg atatccgcca
     8941 gctgcgccgc cgtcggctgt ggcaccacgc tgcaatcggc aaagcccaac gccgggccgc
     9001 tgtactgtgg caacatcagg aaaatgaaag agagcgtttt acagcctggc tgcaagccga
     9061 taatgcgtaa tccggcacgc agcacatttg ccgtggaaga gaggttgccc gcgatacaga
     9121 catccgcttt accggcgctg accattgctg cggcgaacat cagagggtcg gtaagttttt
     9181 ccagcgcatc cggcggcgtt ttttcgcccg cgcgggccag ccagcgatga gcaaattctt
     9241 cccgcattgc gaggttgcca tgcggatcaa tcacctgtag cccgtccatc gccacgccgt
     9301 gactgagcgc aaactgacga agttcaaacg gattggcgac cagaatgggc gttgccagac
     9361 cttgttgatg taaatattgc gcggctttca gcacacgttg gtctaacgca tccggaaaaa
     9421 ccactctggc gggcgctcgc aacgccagtt cacgacaacg ttcaataatc attgcgttcc
     9481 cccagtcgtt gttggatctg cttcaccgtt agcggctgct tcgttacgct caggatcatc
     9541 atcacgtaga ccgtgctgga aaggcggttc agcgcctgca aaatgtccgg gcgtaatact
     9601 tcaaagctgc gggtgataaa gacctgcgcc gctacggttt cggtttcccg cactttggtg
     9661 cgtagcagat tgagcaacgc agcatcgcgc ccgtggctgg cttccggcac cagatgatcg
     9721 tggtcgagat agcgcagcgg ctgatgagaa agccgatgca gatcttcgtc agaaagcccg
     9781 acaatcgcct ggcagcccag cggttccccc agcgcatcgg cgcgcataat gttgccaaga
     9841 cgcgaacgga tatccgccag ccacggctgc cacggttccg ccagttcaat ttgcagccac
     9901 actgccagcg caatggtgct gtcgagaacc gcgcgaaaac ccagacgcgg atcgcttttg
     9961 gcgaccattt tttccgccga caggtgagtc agcgtatccg gcttttttgc caccggctgg
    10021 cggcacagtt cgcagcacgc ctgcggatgt tcatcgctac tggtcagccc atgaacgggc
    10081 tgcggctgct gctgttcatc gtcaacaaac aggcggccct gctcgtcaat aaacttgatg
    10141 cgcagatggc ggctttccag caactcccgg gcagagggcg tcaggcgact gtccgcaggg
    10201 agatggatct ctgcgccttc gctgagcgta tggttcgctc ttagccatgc ttcggtgatg
    10261 aaatctttca tagggattgc cagttagccg gccaggcgac atacaggaat ttcacgctgg
    10321 atgtcatacc aaattcgatg ctggagcctt tcgggataaa catcacgtcg cctgctttgg
    10381 cgatcatggt ttggccttcg tggcgaacat gcagctcctc ttccagcacc atgtcgattt
    10441 cgtcgtagtt cagggtccac gggaagaatg cgttctccca ctgcataaaa ccggcggcca
    10501 tgctgctgcc gtcgtctccg gtcacaagat cagtcaagcc cacgcaatgc ggctctgcgc
    10561 cgtcgaaacg accaaacttg acgctgctgc catcaatcac tttgatgccg cctttgccgg
    10621 tcaccgattt gaagctcggc tgcattgcgc cctgctccag cgactgtttt tccttcatca
    10681 ctttttccat cagctgtgcg accaggcttt cggtaaactg gccttccggc agctgggcaa
    10741 tgatggtttc gcggatgcgc tggctttcgg ttttgtcggc tggcacgctg gcgggcacgg
    10801 acgccgttac cgggatcgat tcatcacatt cggtgatggt aaaacccagt agatccgcca
    10861 cttcacgggc ttccggggta ataatgctgg cgcgcagaac cacggacatt gcctgttcgc
    10921 cgcgcgcgtg tgcttcacga atatcattcg ctgtgatgag ttttttcacc tgcttcctcc
    10981 tgtttggtga gagatgccag ataatccacc agttgctgca cgctttgcgg gtcgtggctg
    11041 tttagctcga aaatcggctc ttcgaaaccc gtctcaagca ataactttcg cgttgcggcg
    11101 acgtcagcat ctggcatgtc cgttttactg atgacggcga tttgccgttt gctgacgcca
    11161 atatccagca acccggcagg caaccgactt tccgggtcat ttgcgccatg gacatagatc
    11221 agcatgtcta catcctgtag cgtggtaatt aaggcgtgat accagcgggg atggctaaaa
    11281 tattcacccg gcgtatcaat atcgccctta tcattaaatt ccacggcctg tgtttttctg
    11341 gcgagggtat aattcccctg caacgcatta aataacgttg tttttcctgc cccgacgcta
    11401 cccacaaacg caattcgttt catgaatgcc tcgtattaac ttttggtcat ttcacaaagc
    11461 gtataattta ataagcgacc taaaccgctg acggtttgtg ataacgcttc ttctactgcg
    11521 cccaccgagc aataaatcac caatgcaccg ctgaagcggt cgagaaaacc gatatgcaca
    11581 tcagcggctt tcagcgctaa atcaccggcg atcatcgccg tttcgccggg agttagcgtc
    11641 ataatgccaa ttgcgcccgc atccggaacg ccgattttct tcgccagttc ctcaccggga
    11701 tgcgcgatga gatgcgcctg tgtgacctgt ttgccgggca caaattcctg aatgatgcgt
    11761 tctttatcca tgagtcgccg cctgtgaaaa actttcgtgt atcgtgacaa tttttcgtca
    11821 gagtaaataa caaaattcgg caagcgcgtt taaaaggtga ggtagatcac taagaatgga
    11881 gagatattcg ctgtggtgca taaactttca tatgcaacgc atgaatataa ataaaataat
    11941 atcgagatat tatatagact gcttttttta ttattcgcaa actcagtaat aagctttact
    12001 aatatattgc agccaaaccg cttaccctga atattcaggg taagcgtgag agttaaaaaa
    12061 gaattacagc ggttgggttt gcgcttcaac cacggccagc gccaccatgt tgacgatacg
    12121 acgcaccgat gcgatcggcg ttaacacgtg aaccggtttc gccacgccca tcagcaccgg
    12181 accgacagtc acaccttccg agctggaaac gcgcagtaag ttgtaactaa tgcgggcagc
    12241 ttccatgttc ggcatcacca gaatattggc agaacctttc aaagggctgt ccggcatacg
    12301 gtcgttgcga atcgcttcca ccagcgctgc atcgccgtgc atttcaccat caatcatcag
    12361 atctggcgca cgatccctga ccagttccag cgcctgacgc attttgctcg acgacgggca
    12421 gtcagaagaa ccaaagttgg agtgcgacaa cagagcaacg cgcggctcaa taccaaaacg
    12481 acggacagtt tctgccgcca tcaaggtgat ctccgccagc tcttctgcgt ctggttcgtc
    12541 attgacgtag gtatcggcaa taaaggtgtt accactcggc agcagcaacg cgttcattgc
    12601 acctgcggtg tgaacgccat cgcgataacc aaagacattt ttcaccacgc taaaatgttc
    12661 atgataatcg cccaccgtac cgcagatcat tgcatcggct tccccacgct gaaccatgat
    12721 cgcgccgatc actgtcgggt tactgatcag cgcccgctgc gcctgttcct gagtgacacc
    12781 gcgacgcttc atgatctgga agtattcggt ccagtactct ttaaagcgcg gatcggattc
    12841 gttattgacg atctcaaaat caacgcccgc tttgatctgc aagcccagtt tctgaatgcg
    12901 catttcgatc acgttcggac gaccgataag gatcggtttc gccagtccct gcgttaccag
    12961 ttcctgagtg gcatgcagaa cgcgcgcctc ttccccttct ggcagaacaa cgcgcttcgg
    13021 cgctttgcga gcctgggaga aaatcggctt cataaacagg ttggttttgt aaacgaactc
    13081 agtcagcttg tcgatgtaga cgtcgaaatc agcaatcgga cgcgtcgcca cgcccgactc
    13141 catcgcggct ttagcgaccg caggagcgat cttaacgatc aagcgcggat caaacggttt
    13201 tggaatgatg tattccggac caaagctcag atcctgatcg ccatacgctg aagccaccac
    13261 ttcgctctgt tccgcatggg cgagttctgc aatcgcacgt accgccgcca gtttcatctc
    13321 ttcgttgatg gcggttgcgc caacgtccag cgcgccacgg aagatgaacg ggaagcacag
    13381 gacgttgttc acctggttcg gatagtcaga acgaccggtg caaatgatgg catccggacg
    13441 cacttctttc gccagcggcg gcagaatttc cggttccggg ttcgccagcg ccaggatcat
    13501 tggcgcacga gccattttct tcaccatttc ctgggtcagc actttcgggc cggaacatcc
    13561 gaggaaaata tccgcgcctt caatcacatc atcgagggta cgtttgccgt catccaccac
    13621 cgcatatgcg gctttggttt ccgccatgtt tggctcacgg ccctgataga taacgccttt
    13681 tgaatcgcaa accacgatgt tatgtttttg cagacccagc gctaccagca ggttcataca
    13741 ggcgattgct gcggcacccg cgccggaaac caccatccgc acgtcggaga tgtttttctc
    13801 caccacgcgc aagccgttga ggatggcggc agtgctgatg attgccgtgc cgtgctgatc
    13861 gtcgtggaat accggaatat tcatccgctc gcgcagtttc tgttcaatat agaaacattc
    13921 tggcgcttta atgtcttcga ggttgattcc gccgaaggtc ggttcgagcg cagcgacaac
    13981 ttcaataaat ttgtccgggt cgagttcatc aacttcaatg tcaaatacat caatcccggc
    14041 gaatttctta aacagaacgc ccttgccttc catcaccggt ttgccagcca gcgcgccaat
    14101 gttgcctaac cccagcaccg ccgtaccgtt agagatcacc gccaccaggt taccgcgcgc
    14161 ggtatatttg taggctttta acgggtcttt ttcgatttca agacaaggtg cggcaacgcc
    14221 tggtgagtag gccagcgcca gatcgcgctg cgttgccaga ggcttggttg gagaaacctg
    14281 gattttccct ggaactggaa attcatggaa atcaagtgca ctttgtttta actggtcatc
    14341 catttggttg ttcctttcac gtaacgttca caaataaagt gtgtgggcaa cagcccctgc
    14401 ccacaacgtg gcgcacatta ttaccccgcc ggagtctaca gactttgagc aagtccaaac
    14461 tctcaccatt aatataatgt tttggtaata atcctataac actgatgtta cctgcttaat
    14521 ccagcaatac catgcctgtc tgctatgctt ttttgatgcg tttagcgaaa tttctcagaa
    14581 gtgtgaatta acgcactcat ctaacacttt acttttcaag gagtatttcc tatgaacgag
    14641 ttagacggca tcaaacagtt caccactgtc gtggcagaca gcggcgatat tgagtccatt
    14701 cgccattatc atccccagga tgccaccacc aatccttcgc tgttgctcaa ggctgccgga
    14761 ttatcacaat atgagcattt aatagacgat gctatcgcct ggggtaaaaa aaatggcaag
    14821 acccaggaac aacaggtggt cgcagcgtgt gacaaactgg cggtcaattt cggtgctgaa
    14881 attctcaaaa tcgtacccgg tcgcgtgtca acagaagttg atgcacgcct ctcttttgat
    14941 aaagaaaaga gtattgagaa ggcgcgccat ctggtggact tgtatcagca acaaggcgtt
    15001 gagaaatcac gcattctgat caaactggct tcgacctggg aaggaattag cgcggcagaa
    15061 gagctggaaa aagaaggtat taactgcaac ctgacgctgc tgttttcttt tgcccaggcg
    15121 cgggcctgtg cggaagcagg cgtttttctg atttcgccgt ttgtcgggcg tatttatgac
    15181 tggtatcagg cacgcaagcc gatggacccg tatgtggtgg aagaagatcc gggcgttaaa
    15241 tcggtgcgca atatctacga ctactataag caacaccact atgaaaccat tgtgatgggc
    15301 gcgagcttcc gtcgcaccga acaaatcctc gccttaaccg gctgcgatcg actgactatc
    15361 gcaccgaatt tgctgaagga gctgcaggaa aaagtttcgc cagtggtacg taaattaatc
    15421 ccaccttctc agacgttccc acgcccagct cccatgagcg aagcggagtt ccgttgggag
    15481 cacaatcagg atgcgatggc ggtagaaaaa ctgtctgaag gcattcgtct gttcgccgtt
    15541 gatcaacgca aactggaaga tcttcttgcc gccaaactat aaaccagcca cggagtgtta
    15601 tatgtcccga aaagaccttg ccaatgcgat tcgcgcactc agtatggatg cggtacaaaa
    15661 agccaactct ggtcatcccg gcgcgccgat gggcatggct gatattgccg aagtgctgtg
    15721 gaacgatttt cttaaacata accctaccga cccaacctgg tatgatcgcg accgctttat
    15781 tctttccaac ggtcacgcgt cgatgctgct ctacagtttg ctgcatctga ccggttacga
    15841 cctgccgctg gaagagctga agaacttccg tcagttgcat tcgaaaaccc caggccaccc
    15901 ggagattggt tatacgcccg gtgttgaaac caccaccggt ccacttggac aaggtttggc
    15961 gaacgccgtc ggactggcga tagcagagcg tacactggcg gcgcagttta atcagccgga
    16021 tcatgaaatt gtcgatcact tcacctatgt gtttatgggc gacggctgcc tgatggaagg
    16081 tatttcccac gaagtctgtt cgctggcggg cacgctagga ctgggcaagc tgattggttt
    16141 ttacgatcac aacggtattt cgattgatgg agaaaccgaa ggctggttta ccgacgatac
    16201 ggcaaaacgt tttgaagcct atcactggca tgtgatccat gaaatcgacg gtcacgatcc
    16261 gcaggcggtg aaggaagcga tccttgaagc gcaaagcgtg aaagataagc cgtcgctgat
    16321 tatctgccgt acggtgattg gctttggttc gccgaataaa gcaggtaagg aagaggcgca
    16381 cggcgcacca ctgggggaag aagaagtggc gctggcacgg caaaaactgg gctggcacca
    16441 tccgccattt gagatcccta aagagattta tcacgcctgg gatgcccgtg aaaaaggcga
    16501 aaaagcgcag cagagctgga atgagaagtt tgccgcctat aaaaaggctc atccgcaact
    16561 ggcagaagag tttacccgac ggatgagcgg tggtttaccg aaggactggg agaaaacgac
    16621 tcagaaatat atcaatgagt tacaggcaaa tccggcgaaa atcgctaccc gtaaggcttc
    16681 gcaaaatacg
//
LOCUS       DADMHC010000077        16686 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.077, whole genome shotgun sequence.
ACCESSION   DADMHC010000077 DADMHC010000000
VERSION     DADMHC010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16686)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16686)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16686
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.077"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            56..526
                     /locus_tag="JNZ57_002109"
     CDS             56..526
                     /locus_tag="JNZ57_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001212336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY8828335.1"
                     /translation="MDLALVTGQRREDITNMRFSDIYDDRLHIRQIKTGMMIAIPLSL
                     SLPVAGLRLGAVVEQCRMVSRGDYLISAGIRKNSPDGSIHPDGLTKKFVAARKLTGIQ
                     FSENPPTFHEVRSLAGRLYKETCGEEFAQRLLGHTSEKTTKMYLDEREKTYLLL"
     gene            complement(919..1260)
                     /locus_tag="JNZ57_002110"
     CDS             complement(919..1260)
                     /locus_tag="JNZ57_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebY family protein"
                     /protein_id="HAY8828336.1"
                     /translation="MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEV
                     MLTCRPGNALYVINPSTLVQYPLNDIAQKEVASGKTNAQPISVIQIDDPNNPGKKMSL
                     APFIERAEKLC"
     gene            complement(1273..2145)
                     /gene="copD"
                     /locus_tag="JNZ57_002111"
     CDS             complement(1273..2145)
                     /gene="copD"
                     /locus_tag="JNZ57_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis membrane protein CopD"
                     /protein_id="HAY8828337.1"
                     /translation="MLAFTWIALRFIHFTSLMLVFGFAMYGAWLAPLTIRRLLAKRFL
                     RLQQHAAVWSLISATAMLAVQGGLMGTGWTDVFSPNIWQAVLQTQFGGVWLWQIVLAL
                     VTLIVALMQPRNMPRLLFMLTTAQFILLAGVGHATLNEGVTAKIHQTNHAIHLICAAA
                     WFGGLLPVLWCMQLIKGRWRHQAIQALMRFSWCGHFAVIGVLASGVLSALLITGFPPT
                     LTTYWGQLLLLKAILVMIMVVIALANRYVLVPRMRQDEDRAAPWFVWMTKLEWAIGAV
                     VLVIISLLATLEPF"
     gene            complement(2149..2523)
                     /gene="yobA"
                     /locus_tag="JNZ57_002112"
     CDS             complement(2149..2523)
                     /gene="yobA"
                     /locus_tag="JNZ57_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopC domain-containing protein YobA"
                     /protein_id="HAY8828338.1"
                     /translation="MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAA
                     PQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYT
                     VDWHVVSVDGHKTKGHYTFSVK"
     gene            2662..2892
                     /locus_tag="JNZ57_002113"
     CDS             2662..2892
                     /locus_tag="JNZ57_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit theta"
                     /protein_id="HAY8828339.1"
                     /translation="MLKNLAKLDQTEMDKVNVDLAAAGVAFKERYNMPVIAEAVEREQ
                     PEHLRSWFRERLIAHRLASVKLSRLPYEPKLK"
     gene            2994..3650
                     /locus_tag="JNZ57_002114"
     CDS             2994..3650
                     /locus_tag="JNZ57_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HAY8828340.1"
                     /translation="MSFWKVAAAQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLVFPS
                     LSLLGCDYSRRALPAPPDLSLLDPLCYAATTWRMTIIAGLPVEYNDRFIRGIAVFAPW
                     RKTPGIYHQSHGACLGRRSRTITVVDEQPQGMDMDPTCSLFTTGQCLGEPDLLASARR
                     LQFFSHQYSIAVLMANARGNSALWDEYGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR
                     "
     gene            3674..4336
                     /gene="exoX"
                     /locus_tag="JNZ57_002115"
     CDS             3674..4336
                     /gene="exoX"
                     /locus_tag="JNZ57_002115"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease X"
                     /protein_id="HAY8828341.1"
                     /translation="MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVRPDRPIS
                     PQAMAIHRITEAMVADKPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKL
                     ARRLWPGIKYSNMALYKTRKLNVQTPPGLHHHRALYDCYITAALLIDIMNTSGWTAEQ
                     MADITGRPSLMTTFTFGKYRGKAVSDVAERDPGYLRWSFNNLDSMSPELRLTLKHYLE
                     KT"
     gene            complement(4333..6400)
                     /gene="ptrB"
                     /locus_tag="JNZ57_002116"
                     /pseudo
     CDS             complement(4333..6400)
                     /gene="ptrB"
                     /locus_tag="JNZ57_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416359.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase B"
     gene            complement(6609..7268)
                     /locus_tag="JNZ57_002117"
     CDS             complement(6609..7268)
                     /locus_tag="JNZ57_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HAY8828342.1"
                     /translation="MSNWLNQLQSLLGQSSSSISSSADQGLGKLLVPGALGGLAGLLV
                     ANKSARKLLTKYGTNALLVGGGAVAGTVLWNKYKDKIRAAHQDEPQFGAQSTPLDERT
                     ERLILALVFAAKSDGHIDAKERAAIDQQLREAGVEEQGRVLIEQAIEQPLDPQRLATG
                     VRNEEEALEIYFLSCAAIDIDHFMERSYLNALGDALKIPQDVRDGIERDLEQQKRTLA
                     E"
     gene            complement(7582..7938)
                     /gene="yebF"
                     /locus_tag="JNZ57_002118"
     CDS             complement(7582..7938)
                     /gene="yebF"
                     /locus_tag="JNZ57_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310584.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YebF"
                     /protein_id="HAY8828343.1"
                     /translation="MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIA
                     ASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHY
                     QVSVDCKAGMAEYQRR"
     gene            complement(8005..8221)
                     /locus_tag="JNZ57_002119"
                     /pseudo
     CDS             complement(8005..8221)
                     /locus_tag="JNZ57_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310585.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="damage-inducible protein YebG"
     gene            8355..9533
                     /gene="purT"
                     /locus_tag="JNZ57_002120"
     CDS             8355..9533
                     /gene="purT"
                     /locus_tag="JNZ57_002120"
                     /EC_number="2.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent phosphoribosylglycinamide
                     formyltransferase"
                     /protein_id="HAY8828344.1"
                     /translation="MTLLGTALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRY
                     ADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVPEIEAIATDMLIQLEEEGLNVV
                     PCARATKLTMNREGIRRLAAEELQLPTSTYRFADSESLFREAVADIGYPCIVKPVMSS
                     SGKGQTFIRSAEQLAQAWKYAQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFC
                     APVGHRQEDGDYRESWQPQQMSPLALERAQEIARKVVLALGGYGLFGVELFVCSDEVI
                     FSEVSPRPHDTGMVTLISQDLSEFALHVRAFLGLPVGGIRQYGPAASAVILPQLTSQN
                     VTFDNVQNAVGADLQIRLFGKPEIDGSRRLGVALATAESVVDAIERAKHAAGQVKVQG
                     "
     gene            complement(9589..10230)
                     /locus_tag="JNZ57_002121"
     CDS             complement(9589..10230)
                     /locus_tag="JNZ57_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HAY8828345.1"
                     /translation="MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVL
                     EVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLK
                     AATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCP
                     TGGISPANYRDYLALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGAKL"
     gene            complement(10267..12078)
                     /gene="edd"
                     /locus_tag="JNZ57_002122"
     CDS             complement(10267..12078)
                     /gene="edd"
                     /locus_tag="JNZ57_002122"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020244583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HAY8828346.1"
                     /translation="MNPQLLRVTNRIIERSRETRSAYLARIEQAKTSTVHRSQLACGN
                     LAHGFAACQPEDKASLKSMLRNNIAIITSYNDMLSAHQPYEHYPEIIRKALHEANAVG
                     QVAGGVPAMCDGVTQGQDGMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPG
                     LTMAALSFGHLPAVFVPSGPMASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAP
                     GTCTFYGTANTNQMVVEFMGMQSPGSSFVHPDSPLRDALTAAAARQVTRMTGNGNEWM
                     PIGKMIDEKVVVNGIVALLATGGSTNHTMHLVAMARAAGIQINWDDFSDLSDVVPLMA
                     RLYPNGPADINHFQAAGGVPVLVRELLKAGLLHEDVNTVAGFGLSRYTLEPWLNNGEL
                     DWREGAEKSLDSNVIASFEQPFSHHGGTKVLSGNLGRAVMKTSAVPVENQVIEAPAVV
                     FESQHDVMPAFEAGLLDRDCVVVVRHQGPKANGMPELHKLMPPLGVLLDRCFKIALVT
                     DGRLSGASGKVPSAIHVTPEAYDGGLLAKVRDGDIIRVNGQTGELTLLVDEAELAARE
                     PHIPDLSASRVGTGRELFSALREKLSGAEQGATCITF"
     gene            complement(12313..13788)
                     /gene="zwf"
                     /locus_tag="JNZ57_002123"
     CDS             complement(12313..13788)
                     /gene="zwf"
                     /locus_tag="JNZ57_002123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HAY8828347.1"
                     /translation="MAVTQTAQACDLVIFGAKGDLARRKLLPSLYQLEKAGQLNPDTR
                     IIGVGRADWDKAAYTKVVREALETFMKETIDEGLWDTLSARLDFCNLDVNDTAAFNRL
                     GAMLDQKNRITINYFAMPPSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSQEIN
                     DQVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVG
                     IEGRWGYFDKAGQMRDMIQNHLLQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDR
                     SNVREKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVAIRVDIDNWRWAGVPFY
                     LRTGKRLPTKCSEVVVYFKTPELNLFKESWQDLPQNKLTIRLQPDEGVDIQVLNKVPG
                     LDHKHNLQITKLDLSYSETFNQTHLADAYERLLLETMRGIQALFVRRDEVEEAWKWVD
                     SITEAWAMDNDAPKPYQAGTWGPVASVAMITRDGRSWNEFE"
     gene            14126..14994
                     /locus_tag="JNZ57_002124"
                     /pseudo
     CDS             14126..14994
                     /locus_tag="JNZ57_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416367.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
     gene            15122..16564
                     /locus_tag="JNZ57_002125"
     CDS             15122..16564
                     /locus_tag="JNZ57_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase II"
                     /protein_id="HAY8828348.1"
                     /translation="MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSP
                     EDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGK
                     GEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNK
                     GINKLGGGLSAEALTEKDKADIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDA
                     KIVAKVERAEAVCSQDAMDDIILASDVVMVARGDLGVEIGDPELVGIQKALIRRARQL
                     NRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAM
                     ARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTA
                     LMTSRISSGLPIFAMSRHERTLNLTALYRGVTPVHFDSANDGVAAASEAVNLLRDKGY
                     LMSGDLVIVTQGDVMSTVGSTNTTRILTVE"
BASE COUNT         4152 a         4252 c         4129 g         4153 t
ORIGIN      
        1 atacaactgc atcagggagg cagcagatca acttccggca tggttcccat tagctatgga
       61 tttagccctt gtaacaggac aacgtcgcga agacataacg aatatgcggt tcagtgatat
      121 ttatgatgat cgtctccaca tcaggcaaat taagacagga atgatgattg ctatccccct
      181 gtcactcagc cttcctgtcg ctggtttacg acttggtgca gtagttgaac aatgccgcat
      241 ggtaagtagg ggggattatc taatcagtgc cgggattaga aaaaacagcc ctgacggcag
      301 cattcacccg gacggcctga caaagaaatt tgtcgcagcc agaaaattaa caggtatcca
      361 gttcagtgaa aacccaccaa cttttcacga agtcagaagc ctggctggac gattgtacaa
      421 agaaacatgt ggagaagaat ttgctcagcg tctacttggc cacacatcgg agaagacaac
      481 aaaaatgtat cttgatgaga gagaaaaaac gtacttactg ctctgatttt aacgtaaatg
      541 gattgttaaa tgtattttgg ttgtgatata accaaaaaag accggaatac agaaattcga
      601 gtaaatttcg gggaatttcg gggagatatt tgcaactaat tgatttcaaa tgcaattaaa
      661 aaaagaccga atacgattcc tgtattcggt ccagggaaat ggctcttggg agagagccgt
      721 gcgctaaaag ttggcattaa tgcaggctta gttgccttgc cctttaagaa tagatgacga
      781 cgccaggttt tccagtttgc gtgcaaaatg gtcaataaaa agcgtggtgg tcatcagctg
      841 aaatgttaaa aaccgcccgt tctggtgaaa gaactgaggc ggttttttta ttggaaatca
      901 aaaggctatt ttaggtaatt aacagagttt ttcagctcgt tctataaacg gtgccagact
      961 catttttttg ccgggattgt taggatcatc aatctgaatc accgaaatgg gttgggcatt
     1021 ggtcttccca ctggcaactt ccttttgtgc gatatcgttt aaaggatact gcacgagggt
     1081 actcggatta ataacataca aagcattacc cggtcggcaa gtcagcatca cctcttcgcg
     1141 attaaacgcc catttgtctt tacccacttc aaaacgactg acggtaatca cctgcggtgc
     1201 agccagcgcc gctgcagaac tggtgagtaa cagaaacgcc agaatacttt ttttcatcat
     1261 tttcgtaatc catcaaaaag gttcgagagt cgcaagcagg ctgatgatca ccagcactac
     1321 cgcacctatc gcccattcga gtttagtcat ccacacaaac cagggtgccg cacgatcttc
     1381 atcctgcctc atgcgcggta caagaacata acgattagcc agcgcaatga ccaccataat
     1441 catcaccagg atggctttga gcaataagag ttggccccag taagtcgtaa gcgtgggggg
     1501 aaatccggta atcaacaatg cactaagcac gccgcttgcc agtacgccga tcaccgcaaa
     1561 atgcccgcac catgaaaaac gcatcagcgc ctgaatagcc tggtgtcgcc aacggccttt
     1621 gatgagttgc atacaccaga gcaccggcag taatccccca aaccacgccg ccgcacaaat
     1681 caggtgaatc gcgtgattag tctgatggat tttcgccgtt accccttcat tcagcgtcgc
     1741 atgccccact cccgccagca gaataaattg cgcggtagtg agcataaaca gcaaacgtgg
     1801 catattccgc ggttgcataa gggcgacgat caacgttacg agggcgagaa caatttgcca
     1861 taaccagacg ccaccaaact gcgtttgcaa aacagcctgc caaatgtttg gcgaaaatac
     1921 atctgtccat cccgttccca tcaacccgcc ctgaacggcg agcattgcag tggcactgat
     1981 caaactccag acggcagcgt gctgttgtaa acgcagaaaa cgcttcgcca gcaagcgacg
     2041 aatcgtcaag ggggccagcc aggcaccgta cattgcgaag ccaaaaacca gcatcagcga
     2101 ggtgaaatgg ataaatcgca gcgcgatcca ggtaaacgcc agcatgattt atttcacgct
     2161 aaaggtgtag tgtcctttcg ttttatgccc gtccaccgaa acaacatgcc agtcaacggt
     2221 gtaggttccg ggtttcagcg aatcggccag tggaacaatc agttgctttt ggtcctgctc
     2281 atttcgcttc gccggtaatg ttttaatatt ttcgtttttt ggccccgtga tttttgcacc
     2341 actgaatcct gtttcaacac cttccgagaa gtttaaagtg attgcctgcg gtgcagctgt
     2401 cacttgcgcg tttgccgcag gatactgatg cgttaaatgc gcatgtgccc agacggaagg
     2461 tgtcaccaac gaagtggtca ggattgccag cgcgtagcga agggagcgtg cagttgaagc
     2521 catattatct attccttttt gtaataactt ttttacagag cataaccttg tctaatgtct
     2581 gagtcgagga tcatcaattc cggcttgcca tcctggctca ctcttagtaa cttttgcccg
     2641 cgaatgatga ggagattaag aatgctgaag aatctggcta aactggatca aacagaaatg
     2701 gataaagtga atgtcgattt ggcggcggcc ggggtggcat ttaaagaacg ctacaatatg
     2761 ccggtgatcg ctgaagcggt tgaacgtgaa cagcctgaac atttgcgcag ctggtttcgc
     2821 gagaggctta ttgcccaccg tttggcttcg gtcaaactgt cacgtttacc ttacgagccc
     2881 aaacttaaat aaaacttata cagagttaca ctttcttaca taacgcctgc taaattatga
     2941 gtattttcta aaccgcaccc ataatttgca gtcattttga aaaggaagtc attatgtcgt
     3001 tctggaaagt tgcagcagcg caatatgagc ctcgtaaaac ctcactcacc gaacaggtag
     3061 ctcatcatct ggagtttgtg agggccgccg ccaggcaaca atgtcagctg ttagtttttc
     3121 catcgctttc tttactgggg tgtgattatt cgcgacgtgc ccttcctgcc ccacccgatc
     3181 tctcactgtt agacccgctt tgttatgccg caacgacctg gcgaatgacc atcattgccg
     3241 gccttcccgt tgaatataac gatcgcttta ttcgtggaat tgcggtgttc gcaccgtggc
     3301 gaaaaacgcc tgggatctac catcagagtc atggtgcatg tctgggccgt cgttccagaa
     3361 ccatcacggt ggtcgatgaa caaccgcaag gtatggatat ggacccgacc tgttcactgt
     3421 ttactacagg gcaatgtctg ggagaacccg acctgctggc gtcggcccgt cgcttacaat
     3481 ttttttcaca tcagtactcg attgccgtgc tgatggcaaa tgcccgtggt aacagtgcac
     3541 tatgggatga atatggtcgt ctcatcgttc gcgccgatcg tggttcatta ttgttagtcg
     3601 gtcagcgttc atcacagggt tggcaaggcg atatcattcc attacgctag gctttttcgg
     3661 cctggagcat gccatgttgc gcattatcga tacagaaacc tgcggtttgc agggagggat
     3721 cgttgagatt gcctctgttg atgtcattga cggaaaaatc gtcaacccca tgagccacct
     3781 ggtgcgcccc gatcgtccta ttagtccaca agcgatggcg attcatcgca tcaccgaagc
     3841 catggtcgcc gataaaccgt ggattgaaga tgtgatccca cactattacg gtagtgaatg
     3901 gtatgtcgcg cacaacgcca gctttgaccg ccgcgtactg cctgagatgc ccggtgagtg
     3961 gatttgcact atgaaactgg cccgtcgttt gtggccaggg atcaagtaca gcaatatggc
     4021 gttatataaa acacggaagc tcaatgtaca gacgccgccg ggcctgcatc atcaccgcgc
     4081 gttgtatgac tgttatatca ccgccgcgtt gcttatcgat attatgaaca cctccggctg
     4141 gacggcagaa cagatggccg atatcaccgg acgtccgtcg ttgatgacga ccttcacctt
     4201 tggcaaatac cgtggcaaag cggtttccga cgttgccgaa cgcgatccgg gctatctgcg
     4261 ctggtcattt aataacctgg acagcatgag cccggagctg cgtttaacac tgaaacatta
     4321 tctggaaaag acttaatccg caggcgtagc gggtaatgtt ccctgcgcca gcgcgaccag
     4381 aaaagcatat tccatcgcta cgccttcgta cgatttaaag cggccagatt taccgccatg
     4441 gcctgagtcc atgtcggtac agagcaataa aagatggtta tcggttttca gctcgcgcaa
     4501 tttagcgacc cattttgccg gttcccaata ttgcacctga gaatcgtgta aaccggtcgt
     4561 taccagtaaa tgcggataag cctgtgcggt gacgttgtca tacgggctgt agcttttcat
     4621 gtactcgtaa tattgcggat cctgcgggtt accccactct tcaaactcac cagtggtaag
     4681 aggaattgat tcatcaagca tcgttgttac aacatcaaca aacggtacct gggcgataac
     4741 gccgtggaat aattccgggc gttgattaat tgcaacgccc atcaacatgc cccccgcact
     4801 cccgcccatc gcataacaaa gcgaaggaaa gccatagccc agttttaaca atgcatcgca
     4861 ggcatcaaga taatcattaa acgtattttt cttcttcaga aattttccgt cttcgtacca
     4921 ttgttgcccc agctcaccac cgccgcgaac atggacaatg gcgtagacaa agccacgatc
     4981 taacaaactc aagcggctaa aactgaaatc ggcatcaata cttgcgccgt aagaaccata
     5041 gccatacacc agcaacgggt tgtgtccttt gcgaaaatgt ttgcgatggt agaccaacga
     5101 aaccggaact tcgacgccat cacgggcgac tatccacagg tgttcactgc ggtaattcgc
     5161 cgcatcaaaa ccaggaactt ccgtttgttt taatacacga cgctcaccgg tatccatatc
     5221 cagttcaaac aaagtgtctg gtgtggtcat ggaagaataa ccataacgca atcgcgcggt
     5281 ttcaggttct ggattgtagg caatccaggt cacataggct ggatcatcaa aggcaatacc
     5341 aatgacttcc cgggtcttgc ggttaatttg gcgcaaactg gttaacccac gctgacgctc
     5401 ttcaaccacc agccagtcgg taaacagcgt aaacccttcc agcatgatgt tttcgcgtgg
     5461 cggaattaac tcttcccact gttgctcatc acgcaggcgg gtacggtata agccaaagtt
     5521 tttgccgtgg cggttggaac gcagataaaa ccgatgctgg tagtgatcaa ggctgtattc
     5581 gtgatctttg cggcgcggca gaaaaacaaa cggctcggca tcggccattt ccgcgtccag
     5641 caggcgaact tcactggtgg tggcgctggc caaatgaatg actacatagt gcttcgaggt
     5701 cgttttatgc aggctgacgt aataggtatc gtctttttct tcgtagatca gtttatcttg
     5761 cgatgctggc gtaccgatgg cgtgacgcca gacctgataa ggcagcagcg tcaccggatg
     5821 cttgcgaaca tagtagaaag tccaggagtc atttgcccag acaaagctgg gttcaacgtt
     5881 atccagcagt tccgggtacc agttaccagt ttccagtttc cagattacga aaacgaatgc
     5941 cgtactggcg tcgggaaaga aaatcttctg ccagcgccat aatggtgtta tcgggcgtaa
     6001 tcgccattcc gcccatcgaa taaaactcac tatgagctgc gcgcttattg gcatcgagca
     6061 atgtttccca ctcatcccac tcttcactga atgccgattg acgctggtag atagcatatt
     6121 cacagcctgg ttcataaata tgccgatagc ggtagccatt tttgatgtag ggcgcagaaa
     6181 cttctcgttg cggaatgcgg tcgatgattt cctttaagat gcgatcctgc aaggcttgtt
     6241 gtgaggccat cacccgatga ccgtaactat tttcttgttg caggtagtcc aggacttctg
     6301 gctgagaacg cgtatcgtcc cgcagccagt agtaattatc gatgcgcgta tcgccatgaa
     6361 gcgtcatggc gtggggaatg cgggcggctt ttggtagcat gttattgttc tttctggttg
     6421 aaacatctta taagggtggc aaaactcacc ggggatgcaa gcgaaacagg ggagtcattg
     6481 cttagatgat gacaggtaat ggcgcggata tcgaatgtta tgcagacaga gaaaatcagc
     6541 ctgttcaaat ggctgtgcga ttctggatag cccgaaatag tcaacttcag gctatccaga
     6601 gagcggaatt attccgccaa agtgcgtttt tgctgttcga gatcgcgttc aatgccgtca
     6661 cgaacatcct gggggatttt cagcgcgtca cccagtgcat tcaggtaact gcgttccata
     6721 aaatggtcaa tatcaatagc cgcgcaactc aggaaataga tttccagcgc ctcttcttca
     6781 ttgcggaccc cggtagccag gcgttgtgga tccagcggtt gttcgattgc ctgctcaatg
     6841 agtacacgcc cctgctcttc cacgccggct tcacgcaatt gctggtcgat tgccgcacgt
     6901 tctttggcat caatatgacc atcactttta gcggcaaaga ccagcgcaag gatcaaacgt
     6961 tctgtacgct catccagcgg cgtactttgc gcgccaaact gcggttcgtc ctgatgcgcc
     7021 gcgcgaattt tatctttgta tttattccac agcaccgtac ccgctaccgc tccgccgcca
     7081 accagtaacg cgttggtgcc atatttcgta agaagtttac gtgctgattt atttgcgacc
     7141 agcagcccag ccagtccgcc taatgcgcct ggcactaaca gtttgcccaa tccctgatcc
     7201 gcagacgagg agatagaaga actgctttgc ccaagcaggg attgcagttg atttaaccag
     7261 ttactcaata accattttta gtgcctgtag catagcggat gaggatgtca gaaaatgtat
     7321 atcgagacaa aagatgcgca aataagcggg gcggtaggcc gttattcaaa gaaattcgcg
     7381 ccaggtaagg tatttactgt atatcaggtg ataagggtat tttaggtgaa agtagtttgt
     7441 cgttttgagt ggcattgttt gatgctgatt gcccgatgcg acgctgttgc gtcttctcag
     7501 gcctacgatt gtggtgcgtt ctggggcgga caaggcactc gcgccgcatc cgccaacggt
     7561 caatcaaatt atcagaagcc attaacgccg ctgatattcc gccattcccg ctttgcagtc
     7621 cacgctgacc tggtaatgaa tatcggcact tttaccacgc acggttagcg gtactgacca
     7681 tttatcatct ttaccctgaa tgtcctgcaa actgacccaa gccacgggat cggcctgacc
     7741 gacaattttt tgatcatctg cccaacgcgc cacgcgattt tgttgataat cacgttttac
     7801 gctcgcggca attccggcag catccagacc ttcacacttt gggaaagtga ccgacttgct
     7861 ggtttcatta ttggcagcga aaactgatgc gcaggcagaa accaacaaca gccctaaaaa
     7921 cgcccctctt tttttcatgt ttttctccat agcacaatga ttcaggagaa agcatggtac
     7981 aaattgtcag gagcgcaagt tgcttcaggc cgcgtgtgag gcatcttcct cttcggattc
     8041 agcaccgacg acctgtgggt ggggacggta atttgccggt tttcagaatg gtgctcagca
     8101 catctttttg ttctgccagc catagcgaaa gggcttcacg ttgctcggct tcctttttgc
     8161 tggtaaacga cattttctct tcgccctcac gaatgactac gtatttaact tcaaccgcca
     8221 tttgcagcct ctcataataa ctgtgatttt atacagtata tttcttttcg gttgagaaat
     8281 caacatcagc aataaagaca cacgcaaacg ttttcgttta tactgcgcgc ggaattaatc
     8341 aggggatatt cgttatgacg ttattaggca ctgcgctgcg tccggcagca actcgcgtga
     8401 tgttattagg ctccggtgaa ctgggtaaag aagtggcaat cgagtgtcag cgtctcggcg
     8461 tagaggtgat tgccgtcgat cgctatgccg acgcaccagc catgcatgtc gcgcatcgct
     8521 cccatgtcat taatatgctt gatggtgatg cattacgccg tgtggttgaa ctggaaaaac
     8581 cacattatat cgtgccggag atcgaagcta ttgccaccga tatgctgatc caacttgaag
     8641 aggaaggact gaatgttgtc ccctgcgctc gcgcaacgaa attaacgatg aatcgcgagg
     8701 gtatccgtcg cctggcggca gaagagctgc agctgcccac ttccacttat cgttttgccg
     8761 atagcgaaag ccttttccgc gaggcggttg ctgacattgg ctatccctgc attgtaaaac
     8821 cggtgatgag ctcttccggc aaggggcaga cgtttattcg ttctgcagag caacttgctc
     8881 aggcatggaa gtacgctcag caaggcggtc gcgccggagc gggccgcgta attgttgaag
     8941 gcgtcgttaa gtttgacttc gaaattacct tgctaaccgt cagcgcggtg gatggcgtcc
     9001 atttctgtgc accggtaggt catcgccagg aagatggcga ctaccgtgaa tcctggcaac
     9061 cacagcaaat gagcccgctt gcccttgaac gtgcgcagga gattgcccgt aaagtggtgc
     9121 tggcactggg cggttatggt ctgtttggtg tcgagctgtt tgtctgtagt gatgaggtga
     9181 ttttcagtga ggtctcccct cgtccacatg ataccgggat ggtgacgtta atttctcaag
     9241 atctttcaga gtttgccctg catgtacgtg ccttcctcgg acttccggtt ggcgggatcc
     9301 gtcagtatgg tcctgcagct tctgccgtta ttctgccaca actgaccagt cagaatgtca
     9361 cgtttgataa tgtgcagaat gccgtaggcg cagatttgca gattcgttta tttggtaagc
     9421 cggaaattga tggcagccgt cgtctgggtg ttgcgctggc gaccgctgag agtgttgttg
     9481 acgccattga acgcgcgaag cacgccgccg gacaggtaaa agtacagggt taaacccggc
     9541 aaaaaaacgc tacaaaaatg cccgatcgta gatcgggcgt tttgactttt acagcttagc
     9601 gccttctaca gcttcacgcg ccagcttagt aatgcggtcg taatcgcccg cttccagcgc
     9661 atctgccgga accagccagg aaccaccgat gcacagcacg cttttcagcg ccaggtagtc
     9721 acggtagtta gccggagaaa taccacccgt cgggcagaaa cggacctggg agaacggacc
     9781 cgcgatcgcc tgcagggctt tcacgccgcc gttagcttca gccgggaaga atttgaactc
     9841 tttcaaaccg tagtccatac ccagcatcag ttcggaaaca gtgctgatcc ccggaattag
     9901 aggaatagtc ccttcggtag cagctttcag cagcggctcg gtcagacccg ggctaattgc
     9961 gaactgtgca cccgcttcag tgacttctgc cagctgctgt ggattcagca ccgtaccggc
    10021 acccacaatc gcttcaggca cttctttggc gatagcacgg atagcgtcaa ctgcacactc
    10081 ggtacgcaga gtcacttcca gaacgcgcac cccaccagca accaacgctt ttgccatcgg
    10141 cactgcgtgt tccagttttt ttaccacgat aaccggtaca accgggccgg tggtcaggat
    10201 tgattctgca cttgttttcc agtttttcat cagagttttc tctcgcctga ttataaattt
    10261 gtcgtcttaa aaagtgatac aggttgcgcc ctgttcggca ccggacagtt tttcacgcaa
    10321 ggcgctgaat aattcacgtc ctgtccccac gcgtgacgcg ctcaggtcag gaatgtgcgg
    10381 ttcgcgagca gccagttccg cttcgtctac cagcagcgtc agttcgcctg tctgtccatt
    10441 cacacgaatg atgtccccgt cgcgcacttt tgccagcagc ccgccatcgt aggcttctgg
    10501 tgttacgtgg atagctgacg gcactttacc tgaagcgccg gagagtcgtc catcggtaac
    10561 taacgcaatt ttgaaacacc ggtccaataa tacaccaagt ggcggcatga gtttatgtaa
    10621 ttctggcatt ccgttcgctt ttggcccctg atgacggaca acaacgacac aatcgcggtc
    10681 cagcaaaccc gcttcaaagg ccggcataac gtcatgctgg ctttcaaaaa caaccgctgg
    10741 cgcttcaatc acctggttct caaccggcac ggcagaggtt ttcataaccg cacggcccag
    10801 gttaccgctt aacacttttg tcccaccatg atgagagaaa ggttgttcga aggaagcgat
    10861 cacattgctg tcgagtgatt tttccgcccc ttcccgccag tccagttcac cattattcag
    10921 ccatggttca agggtataac gagacagacc aaagcctgcc accgtattga catcttcatg
    10981 cagcaggcct gctttgagca gttcacgcac cagaaccggt acgccacctg ccgcctggaa
    11041 gtggttaata tcggccggac cgttcgggta gagacgtgcc atcagcggta caacatcaga
    11101 aaggtcagag aagtcatccc agttaatctg aataccggcc gcgcgcgcca tcgccaccag
    11161 gtgcatggtg tggttagtgg aaccaccggt cgccagcagt gcaacgatac cgttcaccac
    11221 cactttctca tcgatcatct taccgatcgg catccattca ttaccattac cggtcatgcg
    11281 tgtaacctga cgcgcagcgg cagcggtcaa agcatcgcgc agcggagaat ccggatgaac
    11341 aaaagaagag cctggcgact gcatccccat aaattccacc accatctggt tggtgttggc
    11401 agtaccgtag aaagtacatg ttcccggcgc atggtaagac gcggcttctg actccagtaa
    11461 ggccatgcgg tccactttac cttcggcata aagctggcga atacgcactt tttctttatt
    11521 tggtaaaccg cttgccatcg gtccagacgg cacaaacacc gcaggcaaat gaccaaacga
    11581 cagggctgcc atcgtcagac ccgggacaat cttgtcgcac acaccgagga acagagcacc
    11641 atcaaacatg ttatgggaca gccccaccgc cgcagacatc gctatcactt cgcggcttag
    11701 cagcgacaat tccattccat cctgcccctg ggtgacacca tcacacatcg ccggaacacc
    11761 gcccgcaacc tgaccaaccg cattcgcttc atgcagggct ttacgaatga tttctggata
    11821 gtgttcataa ggctggtgcg cggagagcat gtcgttatag gaggtgatga tggcgatatt
    11881 gttacgcaac atgcttttca aagaggcttt gtcttctggc tggcaggcag cgaaaccgtg
    11941 tgccaggtta ccgcatgcca actgcgaacg atgaacggtc gacgttttcg cttgttctat
    12001 ccgggcgaga taagcagagc gagtctcgcg cgaacgttca atgattcgat ttgttacgcg
    12061 taacaattgt ggattcataa aggctcctga aattgagttg tcagagcagg atgattcaca
    12121 acgcgtttca ttcagaggat ttatgagtga aacgcctgta accggagctc atagggcaaa
    12181 aacgtttcag tcagtgtaat aaaaaaagcc tcgtgggtga atccgcacga ggcctgaaag
    12241 tgtaaaaatt gttctacaat ctgtgcaaga tcatgttacc ggtaaaataa ccataaagga
    12301 taagcgcaga tattactcaa actcattcca ggaacgacca tcacgggtaa tcatcgccac
    12361 cgaggcaacg ggtccccagg ttccggcctg atacggtttc ggcgcatcat tgtccatcgc
    12421 ccacgcctca gtaatggagt ctacccattt ccaggcttct tccacttcat cacgacgtac
    12481 aaacagtgcc tgaataccac gcatggtttc cagcagcaga cgttcatagg catccgccag
    12541 atgcgtctga ttaaaggttt ctgaatagct cagatccagc ttggtgattt gcaggttatg
    12601 tttgtggtca aggccaggaa ctttattcag tacctggata tccacgcctt catcaggttg
    12661 cagacggata gtcagtttat tctgcggcag atcctgccac gactctttaa acagattcag
    12721 ttcaggtgtt ttgaaataga ccacgacttc agaacatttg gtcggcagac gtttaccagt
    12781 acgcaggtag aatggcacac cggcccagcg ccagttatca atgtcgacgc ggatcgccac
    12841 gaaggtttct gtattgctgc tcttgttcgc gccctcttct tccagatatc ccggcacttt
    12901 tttgccctgg gcgaagcccg cagtatattg cccacgtacg gttttttcgc gtacgttgga
    12961 gcggtcgatg cggcgcaggg acttcagtac tttcactttt tcatcgcgga tgctgtctgc
    13021 gctcaggtca gatggcggag acatcgcaat catgcagaga atttgtagca ggtggttctg
    13081 aatcatgtca cgcatctgac cggctttatc aaaatagccc cagcgccctt cgatccccac
    13141 ttcttctgcc acggtaatct caacatgatc aatggtgcga ttgtcccagt tattcacaaa
    13201 cagggagtta gcaaaacgca gcgccaacag gttcagcacc gtttctttac caagatagtg
    13261 gtcgatacgg taaacctggc actcctcgaa gtattcgcca acctgatcat tgatttcctg
    13321 cgaggtcgcc agcgacgtcc ccagcggttt ctccatgact acgcgtgccg gtttagcatt
    13381 cagttttgcc tcgccaagcc ctttgcaaat tgcgccaaaa gtgctgggcg gcatggcaaa
    13441 gtagttaatg gtgatacgat ttttttgatc cagcatcgcg ccgagacggt tgaatgcagc
    13501 agtgtcattg acatcgagat tacaaaaatc cagacgtgca ctcagggtgt cccataaacc
    13561 ttcatcaatg gtttctttca tgaaagtttc gagcgcctcg cggacaactt tggtatatgc
    13621 cgctttatcc cagtcagcac gccctacgcc gataatccgg gtgtccgggt tgagctgacc
    13681 ggctttttcc agttgataca gggaaggcag caatttacga cgcgcaaggt cgcctttcgc
    13741 gccgaaaatg accaggtcac aggcctgggc tgtttgcgtt accgccatgt cattctcctt
    13801 aagttaacta acccggtact taagccaggg tatacttgta attttcttac ggtgcactgt
    13861 actgctttta cgagcttgcg aaaactgtaa acgcttatcc acccgtgcga ttacgggaaa
    13921 agcgcgcaaa gtgcggcaaa actgataaaa aaatcatcgt tttccattcg gtaaaaatct
    13981 gatactgatc atgttatgaa aaaaaataac aactttttta tctgcttttg tcattaacac
    14041 ggcacacagg cgtaatatct gacaaaactg catttcgatt tctttcagtg cggaaatcgt
    14101 cattacccgt gagtctcttt acatcatgaa tatgctggaa aaaatccagt ctcagctgga
    14161 acatttgagc aaatcagagc gcaaagttgc cgaggtcatt ctggcttcgc ccgataacgc
    14221 gatccattcg agtattgctg ctatggcact ggaagccaat gttagcgaac cgacggtgaa
    14281 tcgtttctgt cgcagcatgg acacgcgcgg ttttcctgat tttaaacttc atctggcaca
    14341 gagtctggcg aatggcactc cctatgttaa tcgcaatgtc aatgaagatg acagcgttga
    14401 atcatacaca gggaaaatat ttgagtccgc aatggcaacg cttgatcatg tccgtcattc
    14461 actggataaa tctgccatca accgcgccgt cgacttgctc actcaggcaa aaaaaatcgc
    14521 ctttttcgga ttaggctctt cagccgccgt tgcccacgat gcgatgaata agttctttcg
    14581 ttttaatgtt ccggtggtgt actccgatga tatcgtgctg caacgcatga gttgtatgaa
    14641 ttgtagcgac ggagacgtgg tggtgctgat ttctcacact ggaagaacaa aaatctggtc
    14701 aagctggcgc agctggctcg cgaaaacgac gcaatggtga ttgccctcac ctctgcgggt
    14761 accccgctcg cccgggaagc aacgctggca attaccctcg acgtaccgga agatactgac
    14821 atttatatgc ccatggtttc tcgacttgca cagctgaccg tgatagatgt gctggcgaca
    14881 ggatttactt tgcgacgcgg tgcaaaattc agagataact tgaagcgggt caaggaagcg
    14941 ctgaaggaat cgcgttttga taagcagtta cttaatttaa gtgacgatcg ctaaaaacga
    15001 ctgtcactgt cctaatctta tacgacatcc gaatgagatt aatttatcgc catcgcggcg
    15061 ttatttcatt cggatttcat gttcaagcaa cacctggttg tttcagtcaa cggagtatta
    15121 catgtccaga aggcttcgca gaacaaaaat cgttaccacg ttaggcccag caacagatcg
    15181 cgataataat cttgaaaaag ttatcgcggc gggtgccaac gttgtacgta tgaacttttc
    15241 tcacggctcg cctgaagatc acaaaatgcg cgcggataaa gttcgtgaga ttgccgcaaa
    15301 actggggcgt catgtggcta ttctgggtga cctccagggg cccaaaatcc gtgtatccac
    15361 ctttaaagaa ggcaaagttt tcctcaatat tggggataaa ttcctgctcg acgccaacct
    15421 gggtaaaggt gaaggcgaca aagaaaaagt cggtatcgac tacaaaggcc tgcctgctga
    15481 cgtcgtgcct ggtgacatcc tgctgctgga cgatggtcgc gtccagttaa aagtactgga
    15541 agttcagggc atgaaagtgt tcaccgaagt caccgtcggt ggtcccctct ccaacaataa
    15601 aggtatcaac aaacttggcg gcggtttgtc ggctgaagcg ctgaccgaaa aagacaaagc
    15661 agacattaag actgcggcgt tgattggcgt agattacctg gctgtctcct tcccacgctg
    15721 tggcgaagat ctgaactatg cccgtcgcct ggcacgcgat gcaggatgtg atgcgaaaat
    15781 tgttgccaag gttgaacgtg cggaagccgt ttgcagccag gatgcaatgg atgacatcat
    15841 cctcgcctct gacgtggtaa tggttgcacg tggcgacctc ggtgtggaaa ttggcgaccc
    15901 ggaactggtc ggcattcaga aagcgttgat ccgtcgtgcg cgtcagctaa accgagcggt
    15961 aatcacggcg acccagatga tggagtcaat gattactaac ccgatgccga cgcgtgcaga
    16021 agtcatggac gtagcaaacg ccgttctgga tggtactgac gctgtgatgc tgtctgcaga
    16081 aactgccgca gggcagtatc cgtcagaaac tgttgcagcc atggcgcgcg tttgcctggg
    16141 tgcggaaaaa atcccgagca tcaacgtttc taaacaccgt ctggacgttc agttcgacaa
    16201 tgtggaagaa gctattgcca tgtcagcaat gtacgcagct aaccacctga aaggcgttac
    16261 ggcgattatt accatgaccg aatcgggtcg taccgcgctg atgacctccc gtatcagctc
    16321 tggtctacca attttcgcca tgtcgcgcca tgaacgtacg ctgaacctga ctgctctcta
    16381 tcgtggcgtt acgccggtgc actttgatag cgctaatgac ggcgtagcag ctgccagcga
    16441 agcggttaat ctgctgcgcg ataaaggtta cttgatgtct ggtgacctgg tgattgtcac
    16501 ccagggcgac gtgatgagta ccgtgggttc tactaatacc acgcgtattt taacggtaga
    16561 gtaatctcac ctgccccggc cgctgatggc cggggtattt agcaacacat aaattaggac
    16621 tacttattca atccaatcat tatcacagcc ccctgtaaaa tgaatacagg gatagcctga
    16681 atggag
//
LOCUS       DADMHC010000078        16615 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.078, whole genome shotgun sequence.
ACCESSION   DADMHC010000078 DADMHC010000000
VERSION     DADMHC010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16615)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16615)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16615
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.078"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..731
                     /gene="rihB"
                     /locus_tag="JNZ57_002126"
     CDS             <1..731
                     /gene="rihB"
                     /locus_tag="JNZ57_002126"
                     /EC_number="3.2.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ribosylpyrimidine nucleosidase"
                     /protein_id="HAY8828349.1"
                     /translation="MRKQIVADNIHGETGLDGPVFESLTRQAESTHAVKYIIDTLMAS
                     DGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSAEFNIFADPEA
                     ARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENY
                     GLAGGPVHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKV
                     GITIDTDWFWGLVEECVRGYIKTH"
     gene            831..2078
                     /locus_tag="JNZ57_002127"
     CDS             831..2078
                     /locus_tag="JNZ57_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HAY8828350.1"
                     /translation="MDVMRSVLGMVVLLTIAFLLSVNKKKISLRTVGAALVLQVVIGG
                     IMLWLPAGRWIAEKVAFGVHKVMAYSDAGSAFIFGSLVGPKMDTLFDGAGFIFGFRVL
                     PAIIFVTALVSILYYIGVMGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAI
                     VKPFIDHLNRNELFTAICSGMASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFAR
                     LLSPATESSQVSFNNLSFTETPPKSIIEAAATGAMTGLKIAAGVATVVMAVAIIALIN
                     GIIGGVGGWFGFAHASLESILGYLLAPLAWVMGVDWSDANLAGSLIGQKLAINEFVAY
                     LNFSPYLQTGGTLDAKTVAIISFALCGFANFGSIGVVVGAFSAVAPHRAPEIAQLGLR
                     ALAAATLSNLMSATIAGFFIGLA"
     gene            complement(2134..3222)
                     /locus_tag="JNZ57_002128"
     CDS             complement(2134..3222)
                     /locus_tag="JNZ57_002128"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY8828351.1"
                     /translation="MNNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRK
                     GRIKGKGYILTEQEYCVVVGTINMDIRGMADIRYPQAASHPGTIHCSAGGVGRNIAHN
                     LALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIANRDDQT
                     VLAINDTHLLEQLTPQLLNGSRDLLRHAGVVLADCNLTAEALEWVFTLADEIPVFVDT
                     VSEFKAGKIKHWLAHIHTLKPTLPELEILWGQAITSDADRNAAVNALHQQGVQQLFVY
                     LPDESVYCSEKDGEQFLLTAPAHTTVDSFGADDGFMAGLVYSFLEGYSFRDSARFAVA
                     CAAISRASGSLNNPTLSADNALSLVPMV"
     gene            complement(3225..4082)
                     /gene="nfo"
                     /locus_tag="JNZ57_002129"
     CDS             complement(3225..4082)
                     /gene="nfo"
                     /locus_tag="JNZ57_002129"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HAY8828352.1"
                     /translation="MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPL
                     TTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLG
                     LSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEH
                     LAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARIVGFKYLRGMHLN
                     DAKSTFGSRVDRHHSLGEDNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLK
                     AQQTEKAVA"
     gene            complement(4156..5205)
                     /locus_tag="JNZ57_002130"
     CDS             complement(4156..5205)
                     /locus_tag="JNZ57_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HAY8828353.1"
                     /translation="MTNITLQKQHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGF
                     SALTLAILLGMVLGNTIYPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGI
                     SGIIIDVLTLSSTFLLACFLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEA
                     SKVTVAVATVVIFGTVAIFLYPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAI
                     SPDAENAAVISKMLRVMMLAPFLILLAARVKQLSGANSGEKSKITIPWFAILFIVVAI
                     FNSFHLLPQSVVNMLVTLDTFLLAMAMAALGLTTHVSALKKAGAKPLLMALVLFAWLI
                     VGGGAINYVIQSIIA"
     gene            5305..6186
                     /locus_tag="JNZ57_002131"
     CDS             5305..6186
                     /locus_tag="JNZ57_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8828354.1"
                     /translation="MHITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQ
                     LGVQLFDRVGKRLVVNEHGRLLYPRALALLEQAVEIEQLFREDNGAIRIYASSTIGNY
                     ILPAVIARYRHDYPQLPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLE
                     DELVVFAAPTSPLARGPITLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMEL
                     GNSEAIKHAVRHGLGISCLSRRVIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLS
                     NALRRFLDYCDPANVPR"
     gene            6391..7860
                     /gene="lysP"
                     /locus_tag="JNZ57_002132"
     CDS             6391..7860
                     /gene="lysP"
                     /locus_tag="JNZ57_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-specific permease"
                     /protein_id="HAY8828355.1"
                     /translation="MVSETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATIS
                     QAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWNY
                     WYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFS
                     LIKVTTVIVFIIVGVLMIIGIFKGAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGFSF
                     QGTELIGIAAGESEDPAKNIPRAVRQVFWRILLFYVFAILIISLIIPYTDPSLLRNDV
                     KDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPR
                     IFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAIS
                     HYRFRRGYVLQGHDINDLPYRSGFFPLGPIFAFILCLIITLGQNYEAFLKDTIDWGGV
                     AATYIGIPLFLIIWFGYKLIKGTHFVRYSEMKFPQNDKK"
     gene            8153..10133
                     /gene="cirA"
                     /locus_tag="JNZ57_002133"
                     /pseudo
     CDS             8153..10133
                     /gene="cirA"
                     /locus_tag="JNZ57_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416660.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="catecholate siderophore receptor CirA"
     gene            complement(10165..11001)
                     /gene="yeiG"
                     /locus_tag="JNZ57_002134"
     CDS             complement(10165..11001)
                     /gene="yeiG"
                     /locus_tag="JNZ57_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HAY8828356.1"
                     /translation="MEMLEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPPP
                     VLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVANDDGYDLGQGAGF
                     YLNATQPPWATHYRMYDYLRDELPALVQSQFNVSDRCAISGHSMGGHGALIMALKNPG
                     KYTSVSAFAPIVNPCSVPWGIKAFSSYLGEDKNAWLEWDSCALMYASNAQDAIPTLID
                     QGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYL
                     LK"
     gene            11259..11927
                     /gene="folE"
                     /locus_tag="JNZ57_002135"
     CDS             11259..11927
                     /gene="folE"
                     /locus_tag="JNZ57_002135"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HAY8828357.1"
                     /translation="MPSLSKEAALVHEALVARGLETPLRPPVHEMDNETRKSLIAGHM
                     TEIMQLLNLDLADDSLMETPHRIAKMYVDEIFSGLDYANFPKITLIENKMKVDEMVTV
                     RDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQIL
                     IALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRHEFLRAV
                     RHHN"
     gene            11944..13101
                     /locus_tag="JNZ57_002136"
     CDS             11944..13101
                     /locus_tag="JNZ57_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF418 family protein"
                     /protein_id="HAY8828358.1"
                     /translation="MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAITP
                     QDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLF
                     WDGDILLAYGLVGLICWRLVRDAPSVKSLFNTGVMLYLVGLGVLLLLGLISDSQTSRA
                     WTPDASAILYEKYWKLHGGVEAISNRADGVGNSLLALGAQYGWQLAGMMLIGAALMRS
                     GWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQMPRELSAPF
                     QAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTMLFYHLGLFMHFDR
                     LELLAFVIPVWLANILFSVIWLRYFRQGPVEWLWRQLTLRAAGTAISKTSR"
     gene            13243..14282
                     /gene="galS"
                     /locus_tag="JNZ57_002137"
                     /pseudo
     CDS             13243..14282
                     /gene="galS"
                     /locus_tag="JNZ57_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708050.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator GalS"
     gene            14562..15560
                     /gene="mglB"
                     /locus_tag="JNZ57_002138"
     CDS             14562..15560
                     /gene="mglB"
                     /locus_tag="JNZ57_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/glucose ABC transporter
                     substrate-binding protein MglB"
                     /protein_id="HAY8828359.1"
                     /translation="MNKKVLTLSAVMASMLFGAAAHAADTRIGVTIYKYDDNFMSVVR
                     KAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEK
                     ARGQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNK
                     DGQIQSVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAW
                     LSGPNANKIEVVIANNDAMAMGAVEALKAHNKSSIPVFGVDALPEALALVKSGALAGT
                     VLNDANNQAKATFDLAKNLADGKGAADGTNWKIDNKVVRVPYVGVDKDNLAEFSKK"
     gene            15621..>16615
                     /locus_tag="JNZ57_002139"
     CDS             15621..>16615
                     /locus_tag="JNZ57_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020883197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HAY8828360.1"
                     /translation="MVSSTTPSSGEYLLEMSGINKSFPGVKALDNVNLKVRPHSIHAL
                     MGENGAGKSTLLKCLFGIYQKDSGTILFQGKEIDFYSAKEALENGISMVHQELNLVLQ
                     RSVMDNMWLGRYPTKGMFVDQDKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEI
                     AKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDE
                     VTVLRDGQWIATEPLAGLTMDKIIAMMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQ
                     PSIRDVSFDLHKGEILGIAGLMGAKRTDIVETLFGIREKSAGTITLHGKKINNHNA"
BASE COUNT         3973 a         4110 c         4431 g         4101 t
ORIGIN      
        1 ttatgcgtaa acaaatcgtt gccgataata ttcacggtga aaccggactg gatggtccgg
       61 tattcgagtc gctgacccgc caggcagaaa gtacccacgc ggtgaaatac atcattgata
      121 ccctgatggc aagcgatggc gatatcactc tggtgccggt tggtccgctt tcaaatatcg
      181 cggtggcaat gcgtatgcaa cccgcgatcc tgcccaaaat ccgtgaaatt gtgctaatgg
      241 gcggcgctta cggtacaggc aacttcacgc catctgccga gttcaacatc tttgctgatc
      301 cggaagcagc ccgcgtggtg ttcacctccg gcgttccatt agtgatgatg ggcctcgatc
      361 tcaccaacca gactgtttgc accccggacg tgattgcacg gatggaaagg gcaggcggcc
      421 ctgccggaga gctgttcagc gacatcatga acttcactct caaaacgcag ttcgaaaact
      481 acggcctggc tggcggcccg gtgcacgacg ccacctgcat cggttatctg attaaccctg
      541 atggcattaa aacccaggag atgtacgtcg aagtggacgt caacagtggc ccttgctatg
      601 ggcgtaccgt ctgcgacgag ctgggcgttc ttggcaagcc cgctaatacc aaagtcggca
      661 tcactattga taccgactgg ttctggggct tagtcgaaga gtgcgtgcgc ggctacatca
      721 aaacccatta agtgttgata acaagccggg tcagtatcgc aagatccaag cccggctatt
      781 tctgatgggc agaaagccgt cgcccaatat gacatgaaga gataataact atggatgtca
      841 tgagaagtgt tctgggaatg gtggtattgc tgacgattgc gtttttgctg tcagtaaaca
      901 agaagaagat cagcctgcgt accgttggcg cggcgttagt gttacaggtc gtgattggcg
      961 ggattatgct ttggttaccg gcagggcgtt ggatcgctga aaaagtcgct tttggcgtgc
     1021 ataaagtgat ggcgtacagc gacgcgggta gcgcatttat cttcggttcg ctggtcgggc
     1081 cgaaaatgga cacgctgttt gatggcgcag gatttatctt tggtttcagg gtattaccgg
     1141 caattatctt cgtcactgca ctggtgagta ttctctacta catcggtgtg atggggattt
     1201 taattcgcat tctcggcggt atattccaga aagcattaaa tatcagcaag attgagtcat
     1261 tcgtcgcggt caccaccatt ttcctcgggc aaaacgaaat tccggcgatc gtcaaaccct
     1321 ttatcgatca tctgaatcgc aatgaattat ttacagcgat ttgtagtggc atggcctcga
     1381 ttgctggttc gacaatgatt ggttacgccg ccctgggcgt acctgtggaa tatttgctgg
     1441 cggcatcgtt aatggcgatc ccaggcggga tcttgtttgc ccgcctgtta agcccggcta
     1501 cggaatcttc gcaggtttcc tttaataacc tctctttcac cgaaacaccg ccaaaaagca
     1561 ttattgaagc cgctgcgaca ggggcaatga ccgggctgaa aatcgccgcc ggtgtagcga
     1621 cagttgttat ggcagtcgcc atcattgcgt taattaatgg tattatcggc ggcgttggcg
     1681 gctggtttgg ttttgcacat gcctcgctgg agtccatttt aggttacctg ttggccccat
     1741 tggcgtgggt gatgggggtt gactggagtg atgcaaatct tgccgggagt ttgattgggc
     1801 agaagctggc gatcaatgaa tttgtcgctt atctcaattt ctcgccatat ctgcaaacgg
     1861 gtggcactct ggatgctaaa accgtggcga ttatttcttt cgcgttgtgc ggtttcgcta
     1921 actttggttc tatcggggtg gtggtggggg cgttttctgc ggttgcgcca caccgtgcgc
     1981 cggaaatcgc ccaacttggt ttacgcgcgc tggcggcggc gacactttct aacctgatga
     2041 gtgctactat tgcaggattc tttattggtt tagcgtagtg cgcaatttat gagccggata
     2101 agatgcggtc aagcgtcgaa tccggcaaca ttgttacacc attggcacta atgaaagcgc
     2161 gttatcggca gacagggtag ggttgtttaa gctgccgctg gcgcgcgaaa ttgccgcgca
     2221 ggctaccgca aaacgggcgc tgtcgcggaa actgtatcct tcaagaaagc tatatactag
     2281 gcccgccata aaaccatcgt cagcaccaaa actgtctact gtcgtatgcg ctggcgcggt
     2341 cagcaaaaat tgttctccat ccttttcgct gcaataaact gactcatcgg gcaaataaac
     2401 aaacagttgc tgaacacctt gctgatgcaa tgcattcact gcggcattac ggtcagcatc
     2461 gctggtgatc gcctgtcccc ataaaatttc cagctccggt aaagtgggtt tcagggtgtg
     2521 aatatgcgcc agccagtgtt tgattttgcc cgctttgaat tctgaaacgg tatcgacaaa
     2581 caccgggatt tcatcagcga gggtaaagac ccattccagc gcctcggctg tcaggttgca
     2641 atcagccagt accacgcccg catgacgaag taaatcgcgc gacccgttca gtagttgcgg
     2701 tgtcaactgt tccagcagat gggtatcgtt aatcgccagc acggtttgat cgtctcgatt
     2761 ggcaattgcc agatacgtcg atgtgctttg accatgcaaa cgaacgcagc cggagacatt
     2821 cacgccggca cggcgcgttt cttccaggag catttcgcca taaaagtcat cgccaatcac
     2881 tgaaagcaaa tggacgtcac ggcctaacag cgccagattg tgggcgatgt tgcgtcccac
     2941 gccgcccgcc gagcaatgaa ttgtaccggg atgagaagcc gcttgcgggt aacggatatc
     3001 cgccatcccg cgaatatcca tattgattgt ccccaccact acgcagtatt cctgctcggt
     3061 gagaatgtaa cctttgcctt taatccgccc tttgcgcatt aaatccataa tatgcgccgc
     3121 aacgcgcgaa cgactgattt gcagcatgtc cgcaatttcg ttctgctgaa tcagcgggtt
     3181 acgccgtaaa attgcaagga tctccttttc ccggttattc atcttcaggc taccgctttt
     3241 tcagtttgtt gcgctttcag ccaggcgatc tcttctgccc agatatccgg gttgatggtt
     3301 tcaaggatca gcggaatgcc gtcgaaacgg tcgtcctgca tgatccagcg gaacgcatca
     3361 tgaccgatat tgtcttcacc gaggctatga tggcggtcaa cgcggctgcc aaaggtgctt
     3421 ttcgcatcgt taaggtgcat cccgcgcaga tacttaaagc caacaatacg ggcaaaatcc
     3481 gcgaacgttt tctcgcattc ggctggagta cgcaaatcat acccggcagc gaaagcatgg
     3541 caggtatcaa tgcagacgcc gacacgggat ttatcttcca cgccgtcgat aatcgccgcg
     3601 agatgttcga atttaaaccc taagttactg ccctgaccgg cggtgttttc aatcaccgct
     3661 gttacacctt gagttttatc cagcgcaatg ttgatggatt cggcaatacg cgcaaggcaa
     3721 tcctcttctg aaatctgcat cagatggctg ccagggtgga agttgagcaa agaaagcccc
     3781 agttgttcgc aacgctgcat ttcatctata aaggcatcgc gcgatttttc cagagcttca
     3841 gtgaccggat gtccgaggtt aatcagatag ctgtcgtggg gaagaatttg cgccgatgtg
     3901 tagtgatatt tttcacaggc cgctttgaat tcatcgatgg tttgcgtcgt gagcggtgcg
     3961 gcacgccact gacgttggtt tttggtgaac aaggcaaacg cggttgcgtc gatttcggcg
     4021 gcgcgaattg cggcatttgc cagaccgcca gcagcactaa cgtgcgctcc aatgtatttc
     4081 atgcgaggac tcctgttaaa cccgctggag gaaaacggta atgatagcgg gttaacagga
     4141 gcaagatgta gtggtttatg cgatgatgct ttgaatcaca tagttaatcg caccaccacc
     4201 aacaatcagc caggcaaaca gtaccagtgc catcagcaga ggtttcgccc cggctttttt
     4261 cagcgcgctg acgtgagtgg tcagacccag cgccgccatc gccattgcca gcaggaaggt
     4321 atccagcgtt accagcatgt tcaccacgct ctgcggtaac aggtggaacg agttaaagat
     4381 ggcaacgacg atgaacaaga tggcaaacca cggaatagtg attttgcttt tctcgccgct
     4441 gttcgcccca gacagctgtt taacacgcgc cgccagcagg atgaggaacg gagccagcat
     4501 catcacgcgc agcattttgg aaataactgc tgcgttttcc gcatccgggc tgatggcatg
     4561 acctgccgcc accacctgcg ccacttcgtg cacagtagaa ccaatgtaga taccgaaagt
     4621 ttccggacta aaccattgag acatcagcgg atatatcgcc gggtagagga aaatcgcgac
     4681 ggtcccgaag ataacaacgg ttgcaacagc cacggttact ttactggctt ccgctttcac
     4741 taccggctca gtcgccagta ccgcggcagc accacagata ctgctaccgg caccgatcaa
     4801 ccagctggtg tgcttatcca gaccaaacac tttctgcccc aggaagcaag ccagcaggaa
     4861 ggtactggac agcgtcaaca cgtcaatgat gatcccactg ataccgacat cggcaatttg
     4921 cgagaacgtc agacggaagc cataaagaat gatacccaga cgtaataaat attgcttggc
     4981 aaacagcaca ccaccgtcac agcttttcca gatgtgcgga tagatggtgt tgcctaaaac
     5041 catccccaac aagattgcga gggtgagggc actaaacccg gcacccgcaa ccgcgggaat
     5101 ggaaccaccc cacagggcga ccccggtgat aactgcactc agggctaacc ccggaataaa
     5161 atgccacagt gtacgatgtt gtttctgtaa ggtgatattc gtcataaccc tctccttata
     5221 accgggcata aggttacgac taactggttt aaaaataaaa ttgattatat atttataatt
     5281 aatctttata agtggtaagc gactatgcac atcaccctcc ggcagttgga agtttttgca
     5341 gaagtattga aaagtggatc aaccacccag gcgtcggtga tgctggcgtt gtcgcaatca
     5401 gcagtgagcg cagccttgac cgacctggaa gggcagcttg gcgtgcaact gtttgatcgc
     5461 gtggggaaaa gactggttgt taatgaacac gggcggctgc tctatccgcg tgcgttggca
     5521 ttgcttgaac aggcggttga aatcgaacaa ctgtttcgcg aagacaacgg cgcgattcgt
     5581 atctatgcca gtagtaccat cggtaactac attctgcctg cagttatcgc ccgttatcgc
     5641 catgattatc cgcagttgcc gattgaactt agcgttggga acagccagga cgtgatgcaa
     5701 gcggtgctgg atttccgcgt tgatattggc tttattgaag gaccgtgcca cagcactgaa
     5761 atcatttctg aaccgtggct ggaagacgag ctggtggttt tcgccgcgcc gacttcgccg
     5821 ttggctcgtg gtccgatcac cttagaacag ctggccgctg cgccgtggat cctgcgtgaa
     5881 cgcggttccg gcacgcggga gattgtcgat tatctattgc tgtcacattt accgaagttt
     5941 gagatggcga tggaattagg taactccgag gcaatcaaac atgcggtgcg tcatgggttg
     6001 ggaattagtt gcctgtcgcg acgggtgatt gaagatcaat tgcaggcagg cacattaagt
     6061 gaagttgcgg tccctctgcc gcgcctgatg cgtacgttgt ggcgtataca tcatcggcaa
     6121 aaacaccttt ccaacgcgct acggcgcttt ctggactatt gcgatcccgc gaatgtaccg
     6181 cgttaagttg ctgtacaaga acatgctggt gctgtgtcga tttcgtgacg cagcgccctc
     6241 agcatgcatt cgccagaaaa gagattggct gctttactta taatccctgg gcgatcatga
     6301 aggtgtctta taaccgtgta tttctgccgg aaggattgcc aattgtctgc tacaatcgcg
     6361 cctcattttt aagatggata gcatttttgt atggtttccg aaactaaaac cacagaagcg
     6421 ccgggcttac gccgtgaatt aaaggcgcgt cacctgacga tgattgccat tggcggttcc
     6481 atcggtacag gtctttttgt tgcctctggc gcaacgattt ctcaggcagg tccgggcggg
     6541 gcattgctct cgtatatgct gattggcctg atggtttact tcctgatgac cagtctcggt
     6601 gaactggctg catatatgcc ggtttccggt tcgtttgcca cttacggtca gaactatgtt
     6661 gaagaaggct ttggcttcgc gctgggctgg aactactggt acaactgggc ggtgactatc
     6721 gccgttgacc tggttgcagc tcagctggtc atgagctggt ggttcccgga tacaccgggc
     6781 tggatctgga gtgcgttgtt cctcggcgtt atcttcctgc tgaactacat ctcagttcgt
     6841 ggctttggtg aagcggaata ctggttctca ctgatcaaag tcacgacagt tattgtcttt
     6901 atcatcgttg gcgtgctgat gattatcggt atcttcaaag gcgcgcagcc tgcgggctgg
     6961 agcaactgga caatcggcga agcgccgttt gctggtggtt ttgcggcgat gatcggcgta
     7021 gctatgattg tcggcttctc tttccaggga accgagctga tcggtattgc tgcaggcgag
     7081 tccgaagatc cggcgaaaaa cattccacgc gcggtacgtc aggtgttctg gcgaatcctg
     7141 ttgttctatg tgttcgcgat cctgattatc agcctgatta ttccgtacac cgatccgagc
     7201 ctgctgcgta acgatgttaa agacatcagc gttagtccgt tcaccctggt gttccagcac
     7261 gcgggtctgc tctctgcggc ggcggtgatg aacgcagtta ttctgacggc ggtgctgtca
     7321 gccggtaact ccggtatgta tgcgtctact cgtatgctgt acaccctggc gtgtgacggt
     7381 aaagcgccgc gcattttcgc taaactgtcg cgtggtggcg tgccgcgtaa tgcgctgtat
     7441 gcgacgacgg tgattgccgg tctgtgcttc ctgacctcca tgtttggcaa ccagacggta
     7501 tacctgtggc tgctgaacac ctccgggatg acgggtttta tcgcctggct ggggattgcc
     7561 attagccact atcgcttccg tcgcggttac gtattgcagg gacacgacat taacgatctg
     7621 ccgtaccgtt caggtttctt cccactgggg ccgatcttcg cattcattct gtgtctgatt
     7681 atcactttgg gccagaacta cgaagcgttc ctgaaagata ccattgactg gggcggcgta
     7741 gcggcaacgt atattggtat cccgctgttc ctgattattt ggttcggcta caagctgatt
     7801 aaaggaactc acttcgtacg ctacagcgaa atgaagttcc cgcagaacga taagaaataa
     7861 gtttcctccc ttccttgcta agccctctca accgagaggg ctttttcaat tccatttccc
     7921 tgacaaatca tgcggatata aaatttaaca tttagattga taattgttat cgtttgcatt
     7981 atcgttacgc cgcaatcaaa aaaggctgac aaatcagagg ctgttccggc tttctgggat
     8041 gatcacctgc atacaaataa gtccaccgcg atgctgccgt acgcaagggg acgtgaagaa
     8101 gatgtgagcg ataacccatt ttattttcgt agttacctca tggaaatatg gaatgtttag
     8161 gttgaaccct ttcgtacggg tcgggctgtg tttgtccgct atttcttgtg catggcctgt
     8221 gttagcggtc gatgatgatg gcgaaacgat ggttgtcact gcatcttccg ttgaacaaaa
     8281 cctcaaagat gcacccgcca gtatcagcgt cattacccag gaagacctgc agcgaaaacc
     8341 ggtacagaat ctgaaggatg tcctcaaaga agtgcctggc gtacaactga cgaacgaagg
     8401 ggataaccgt aagggcgtta gtattcgtgg tctggacagc agctacaccc tgattctcgt
     8461 cgacggtaaa cgcgttaact cccgcaatgc cgtcttccgc cacaatgatt tcgatctgaa
     8521 ctggatcccg gtcgattcca tcgaacgtat tgaagtggtt cgtggcccga tgtcgtcgct
     8581 atacggctcc gatgcgctcg gcggtgtagt gaatatcatc accaaaaaaa tcggtcagaa
     8641 atggtcgggt accgttaccg tcgataccac cattcaggaa catcgcgatc gcggtgatac
     8701 ctataacggt cagttcttta ccagtggacc attaattgat ggtgtgctgg gaatgaaagc
     8761 ttacggcagc ctggcaaaac gtgaaaagga tgacccgcaa aactcaacga ccaccgatac
     8821 cggagaaacg ccgcgtattg aaggattctc cagccgcgac ggcaatgttg aatttgcctg
     8881 gacaccgaat caaaatcacg attttactgc cggatacggt ttcgaccgtc aggaactcgc
     8941 tggacaaaaa ccgcctggaa cgccagaact actccgtcag ccataatggg cgttgggatt
     9001 acggcaccag cgaactgaaa tactacggtg agaaagtcga gaacaaaaac cctggcaaca
     9061 gcagcccgat aacttccgaa agcaatacgg tcgacggcaa atacacgttg ccgctgacgg
     9121 cgattaatca gtttctcacg gttggcggtg aatggcgtca cgacaaactt agcgatgcgg
     9181 tgaacctgac cgggggaacc agctccaaaa cgtctgccag ccagtacgcg ctgtttgtgg
     9241 aagatgaatg gcggatcttc gagccgctgg cgctgacgac cggcgtgcgt atggacgatc
     9301 acgaaaccta cggtgaacac tggagtccgc gtgcctacct ggtttataac gccaccgaca
     9361 ccgtaacggt gaaagggggc tgggcgacgg catttaaagc accttctctg ttgcaactta
     9421 gccctgactg gacgagcaat tcctgccgtg gcgcatgtaa gattgtgggt agcccggatc
     9481 tgaaaccaga aaccagcgaa agttgggagc tggggcttta ctacatgggt gaagaaggct
     9541 ggctggaagg ggttgaatcc agcgttaccg ttttccgtaa cgatgtgaaa gatcgtatca
     9601 gcatcagccg tacgtctgac gtcaacgctg caccgggcta ccaaaacttt gttggttttg
     9661 agacgggcgc taacggacgg cgcataccgg tatttagcta ctacaacgtt aacaaagctc
     9721 gtattcaggg cgtggaaacc gaactgaaaa ttccgttcaa cgatgaatgg aaactgtcga
     9781 tcaactacac ctacaacgat ggtcgtgatg tcagcaacgg cgaaaacaaa ccgctatccg
     9841 atctgccgtt ccatactgct aacggtacgc tggactggaa accgctggcg ctggaagact
     9901 ggtcattcta tgtttctggt cactataccg ggcagaaacg cgccgacagc gcgacggcta
     9961 aaacaccggg cggttatacc atctggaata ccggcgcggc ctggcaggtg actaaagacg
    10021 tcaaactgcg cgcaggcgtg ctgaaccttg gcgacaagga tctcagtcgt gacgactaca
    10081 gctataacga agacggacgt cgttacttta tggcagtgga ttatcgcttc tgatgagaag
    10141 atgcccggcg aaccgggcgg actttcactt cagtaaatac tgcgcatgga agcgcaggtg
    10201 atcctctata aaagaggcga tgaagtagta actgtgatca tatcccggct gaatacgcag
    10261 cgtcatcggc cacgctttct ggcgcgcggc ttctgccagt accgcaggtt gcaactggtc
    10321 ggcaagaaac tgatcattat cgccctgatc gataagcgtc gggatcgcat cctgcgcgtt
    10381 actggcatac atcagcgcgc aactgtccca ttccagccat gcatttttgt cctcacctaa
    10441 atagctgcta aacgctttga ttccccacgg gacgctgcac ggattcacaa ttggcgcaaa
    10501 ggccgaaacg ctggtgtatt tacccggatt tttcagcgcc ataatcagcg caccgtgacc
    10561 acccattgag tgaccgctaa tggcgcagcg gtcgctgaca ttaaattgcg attgaaccag
    10621 cgccggtaat tcatcgcgca gataatcata catccggtaa tgcgtcgccc acggcggttg
    10681 cgtggcatta agataaaagc ctgcgccctg gcctaaatcg tagccatcgt cgttggcaac
    10741 cttttcgccg cgcgggctgg tgtctggcat caccagtaca atccccagtt ctgccgccac
    10801 gcgctgggca cccgccttgg tggtgaagtt ctcgtcattg caggttaatc cggaaagcca
    10861 gtacagcact ggtggcgggg tgtgatcacg agggggtggg agaaagatac tgaacgtcat
    10921 cgggcagttt aaggtactgg agtcgtgtcg ccagcgttgc tgccagcctt caaaacagcg
    10981 gtgctcttcg agcatttcca tgcgtggctc cttgttgtgt tgtttgcaat ttcttcatca
    11041 taccgtttat tcaatgtgct gtgagtaact ttcacttccg tatttgcata acgatgtttt
    11101 aacatctgct gatgaaaggc agcggcaatt acaataatta tcgctgtgaa tactggatta
    11161 tgtgcgccgc ctcacgcaca ataatcaggc tgtaaatcag cttaataact ttgcccccac
    11221 gcagggcgga ggcgtcacac ctgcaggaga aatcataaat gccatcactc agtaaagaag
    11281 cggccctggt tcatgaagcg ttagttgcgc gaggactgga aacaccgctg cgcccgcccg
    11341 tgcatgaaat ggataacgaa acgcgcaaaa gccttattgc tggtcatatg accgaaatca
    11401 tgcagctgct gaatctcgac ctggctgatg acagtttgat ggaaacgccg catcgcatcg
    11461 ctaaaatgta tgtcgatgaa attttctccg gtctggatta cgccaacttc ccgaaaatca
    11521 ccctcattga aaacaaaatg aaggtcgatg aaatggtcac cgtgcgcgat atcactctga
    11581 ccagtacctg tgaacaccat tttgttacca tcgatggcaa agcgacggtg gcttatatcc
    11641 cgaaagattc ggtgatcggt ctgtcaaaaa ttaaccgtat cgtgcagttc tttgcccagc
    11701 gtccgcaggt gcaggaacgt ctgacgcagc aaattcttat tgcgctacaa acgctgctgg
    11761 gcaccaataa cgtggctgtc tccattgatg cggtgcatta ctgcgtgaaa gcgcgtggca
    11821 tccgcgatgc aaccagtgcc acaacaacga cctctcttgg tggattgttc aaatccagtc
    11881 agaatacgcg ccacgagttt ctgcgcgctg tgcgtcatca caactgatta aaaggcagga
    11941 accatggagc gcaacgtaac gctcgatttt gttcgcggcg tcgccattct ggggatcctg
    12001 ctattaaaca tcagcgcctt tgggctacca aaggcggctt atctcaatcc cgcttggtac
    12061 ggcgctatta cgccgcagga tgcatggacc tgggcatttc tcgatctcat cggccaggtg
    12121 aaattcctca cgctttttgc gctgctgttt ggtgcgggcc tgcaaatgtt gctgccccgt
    12181 ggcagacgct ggatccagtc gcggttaacg ctgttagtct tgctgggttt tattcacggt
    12241 ttattgttct gggacggcga tattctgctg gcttacgggc tggtgggctt aatctgctgg
    12301 cggctggtgc gcgatgcgcc atcggtaaaa agcctgttta atacaggcgt catgctttat
    12361 ctggtggggc ttggcgtttt gctgttattg gggctgattt ccgacagcca gaccagccgc
    12421 gcctggacgc cggatgcatc ggctattttg tatgaaaaat actggaagct tcacggcggc
    12481 gttgaagcaa tcagtaatcg tgccgatggt gttggcaaca gtttactggc actgggcgca
    12541 cagtatggct ggcaactggc agggatgatg ctcattggtg cggcgctgat gcgcagcggc
    12601 tggctgaaag ggcagttcag cttacgtcac tatcgtcgta ctggttttgt gctggtggcg
    12661 attggggtga ctattaacct tcctgccatc gccctgcaat ggcagctgga ctgggcgtat
    12721 cgctggtgtg ccttcttact tcaaatgccg cgggaactga gtgcgccgtt tcaggcgatt
    12781 ggctatgcgt cgctgtttta tggcttctgg ccgcaattga gccgctttaa gctggtgctt
    12841 gcgatcgcct gcgtcggacg gatggcgctg accaactatc tattgcaaac gctgatttgt
    12901 accatgcttt tttaccacct cggtttgttt atgcattttg accgcctgga gctgctggcg
    12961 tttgttattc cggtatggct ggcgaatatc ctcttctctg ttatctggct gcgttacttc
    13021 cgccaggggc cggtggaatg gctctggcgt cagttaactt tgcgtgctgc cggaacggca
    13081 atatctaaaa catcaagata acgatctgga tcacattcgt taacaaaacg gctgtaaccg
    13141 tttccattgc tgtgactcga ttcacgaagt cctgtattca gtgctgacaa aatagccgcc
    13201 agcaagcagt catttactgc aatctcataa caggtagtga atatgatcac cattcgtgat
    13261 gtagcgcgtc aggctggcgt ctctgtggca acggtttccc gggtgctcaa taacagcacg
    13321 ctggtcagtg ccgacacgcg tgaagcagta atgaaagccg tgagtgagct ggattatcgg
    13381 ccaaacgcca atgcccaggc gctggcaact caggttagcg acaccattgg cgtggtggtg
    13441 atggacgttt ctgatgcgtt tttcggcgcg ctggtaaaag cggtggatct agtcgctcag
    13501 cagcatcaga aatacgtgct aatcggcaat agctatcatg aagcggaaaa agagcgtcac
    13561 gccattgagg tgttaattcg ccagcgttgt aatgcgttga ttgttcactc aaaagcattg
    13621 agtgacgatg aactggcgca atttatggat aacattcccg gtatggtgtt aatcaaccgc
    13681 gttgtgccgg ggtacgccca tcgttgcgtt tgcctggata atctcagcgg tgcccgaatg
    13741 gcgacgcgca tgttgctgaa taacggtcat caacgtattg gttatctttc ttccagtcac
    13801 ggcattgaag atgacgccat gcgtaaagca ggctggatga gtgcgttgaa agagcaggat
    13861 attattccgc cggaaagctg gattggcact ggtacgccgg acatgccggg cggtgaggcg
    13921 gcgatggttg aactgctggg gcgcaatcta caacttaccg ctatatttgc ttataacgac
    13981 aatatggccg ctggcgcact gacagcatta aaagataatg gcattgcgat tccgttacat
    14041 ctctcaatca tcggtttcga tgatattccc atcgcccgtt acaccgcccg caattaacga
    14101 ccgtgcgtta tcccattgct tcaatggcta aattagccac cgaactggcc ttgcaggggg
    14161 cagcaggcaa tattgatcct cgtgccagcc actgttttat gccgacgtta gtgcgtcgcc
    14221 attctgtcgc aacgcgccag aatgcggcgg cgatcactaa ctcaacaaat caggcgatgt
    14281 aaccgctttc aatctgtgag tgatttcaca gtatcttaac aatgtgatag ctatgattgc
    14341 accgttttaa cgttgtaacc cgtatgtaac agtgaataat cactttcacc gaggtaatag
    14401 cgtcataaca acaattaaag ccgttttctg gagcgttacc gggcatggaa gaacgaattt
    14461 taaaaagtga gcttcggcgt tcagtaacac ttcattaact ctactgccct gccgagcatt
    14521 tatctcaagc actaccctgc ataagaaaaa ccggagatac catgaataag aaggtgttaa
    14581 ccctgtctgc tgtgatggcc agcatgttat tcggtgccgc tgcacacgct gctgatactc
    14641 gcattggtgt aacaatctat aagtacgacg ataactttat gtctgtagtg cgcaaggcta
    14701 ttgagcaaga tgcgaaagcc gcgccagatg ttcagctgct gatgaatgat tctcagaatg
    14761 accagtccaa gcagaacgat cagatcgacg tattgctggc gaaaggggtg aaggcactgg
    14821 caatcaacct ggttgacccg gcagctgcgg gtacggtgat tgagaaagcg cgtgggcaaa
    14881 acgtgccggt ggttttcttc aacaaagaac cgtctcgtaa ggcgctggat agctacgaca
    14941 aagcctacta cgttggcact gactccaaag agtccggcat tattcagggc gatttgattg
    15001 ctaaacactg ggcggcgaat cagggttggg atctgaacaa agacggtcag attcagtccg
    15061 tactgctgaa aggtgaaccg ggccatccgg atgcagaagc acgtaccact tacgtgatta
    15121 aagaattgaa cgataaaggc atcaaaactg aacagttaca gttagatacc gcaatgtggg
    15181 ataccgctca ggcgaaagat aagatggacg cctggctgtc tggcccgaac gccaacaaaa
    15241 tcgaagtggt tatcgccaac aacgatgcga tggcaatggg cgcggtagaa gcactgaaag
    15301 cacacaacaa gtccagcatt ccggtgtttg gcgtcgatgc tctgccagaa gcgctggcgc
    15361 tggtgaaatc cggtgcactg gcgggcaccg tactgaacga tgctaacaac caggcgaaag
    15421 cgacctttga tctggcgaaa aacctggccg atggtaaagg tgcggctgat ggcaccaact
    15481 ggaaaatcga caacaaagtg gtccgcgtac cttatgttgg cgtagataaa gacaacctgg
    15541 ctgaattcag caagaaataa gactgattgg gcgcagtcta ttactgcgcc cttattgtat
    15601 gaccaacaag gtaaaattat atggtcagct caacgactcc gtcctccggg gaatacttgt
    15661 tggaaatgag cggtatcaac aagtcctttc ctggtgttaa ggcacttgat aacgttaatt
    15721 taaaagtccg gccacattct atccatgcat taatggggga aaacggcgca ggaaaatcaa
    15781 cattattaaa atgcttgttt ggtatttatc aaaaagactc cggcaccatt ttattccagg
    15841 gtaaagagat cgatttctat tcggccaaag aagcactgga aaatggtatt tcgatggtac
    15901 accaggagtt aaacctggta ttacaacgtt cggtgatgga caacatgtgg cttgggcgat
    15961 accccaccaa aggcatgttt gtcgatcagg acaaaatgta ccgcgaaacc aaagcgattt
    16021 ttgatgaact ggatattgat atcgatccgc gtgcgcgcgt cggcacatta tctgtttcgc
    16081 aaatgcagat gatcgaaatc gccaaagcgt tttcctataa cgcgaaaatt gtgattatgg
    16141 atgaaccgac ttcttcgtta accgaaaaag aggtcaatca tctgttcact attattcgta
    16201 aattaaaaga gcgcggctgc ggtattgttt atatctcgca taaaatggag gaaatcttcc
    16261 agttatgtga tgaagttacc gtattgcgcg acggtcagtg gatcgccacc gaaccgctgg
    16321 caggactgac gatggacaag atcatcgcca tgatggttgg gcgttctctt aaccagcgtt
    16381 tccctgacaa agaaaacaag ccgggcgaag tcatcctcga ggtgcgtaac ctgacgtcac
    16441 tgcgccagcc gtcgatccgt gatgtctcgt ttgatctgca taaaggggag atcctcggta
    16501 ttgccgggct gatgggggcg aaacgtaccg atattgttga gacgttattt ggtattcgcg
    16561 agaaatcggc cggcaccatt acgttgcacg gcaaaaagat caataaccat aatgc
//
LOCUS       DADMHC010000079        16448 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.079, whole genome shotgun sequence.
ACCESSION   DADMHC010000079 DADMHC010000000
VERSION     DADMHC010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16448)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16448)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16448
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.079"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            20..104
                     /locus_tag="JNZ57_002140"
     tRNA            20..104
                     /locus_tag="JNZ57_002140"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:54..56,aa:Tyr,seq:gta)
     gene            152..283
                     /locus_tag="JNZ57_002141"
     ncRNA           152..283
                     /ncRNA_class="other"
                     /locus_tag="JNZ57_002141"
                     /product="RtT sRNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00391"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="rtT sRNA, processed from tyrT transcript; Derived
                     by automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00391"
     gene            complement(467..1144)
                     /gene="narI"
                     /locus_tag="JNZ57_002142"
     CDS             complement(467..1144)
                     /gene="narI"
                     /locus_tag="JNZ57_002142"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory nitrate reductase subunit gamma"
                     /protein_id="HAY8828361.1"
                     /translation="MQFLNMFFFDIYPYIAGAVFLIGSWLRYDYGQYTWRAASSQMLD
                     RKGMNLASNLFHIGILGIFVGHFFGMLTPHWMYEAWLPIEVKQKMAMFAGGASGVLCL
                     IGGVLLLKRRLFSPRVRATTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLV
                     GWAQSVVTFHGGASQHLDGVAFIFRLHLVLGMTLFLLFPFSRLVHIWSVPVEYLTRKY
                     QLVRARH"
     gene            complement(1144..1854)
                     /gene="narJ"
                     /locus_tag="JNZ57_002143"
     CDS             complement(1144..1854)
                     /gene="narJ"
                     /locus_tag="JNZ57_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase molybdenum cofactor assembly
                     chaperone"
                     /protein_id="HAY8828362.1"
                     /translation="MIELVIVSRLLEYPDAALWQHQQEMFEAIAASKNLSKEDAHALG
                     IFLRDLTAMDPLDAQAQYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLLAQYEQHG
                     LQLNSRELPDHLPLYLEYLSQLPQSEAVEGLKDIAPILALLSARLQQRESRYAVMFDL
                     LLKLANTAIDSDKVAEKIADEARDDTPQALDAVWEEEQVKFFADKGCGDSAITAHQRR
                     FAGAVAPQYLNITTGGQH"
     gene            complement(1851..3389)
                     /gene="narH"
                     /locus_tag="JNZ57_002144"
     CDS             complement(1851..3389)
                     /gene="narH"
                     /locus_tag="JNZ57_002144"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit beta"
                     /protein_id="HAY8828363.1"
                     /translation="MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGVEYAWFNNV
                     ETKPGQGFPTDWENQEKYKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYE
                     PFDFDYQNLHTAPEGSKSQPIARPRSLITGERMAKIEKGPNWEDDLGGEFDKLAKDKN
                     FDNIQKAMYSQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCR
                     GWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYD
                     ADAIERAASTENEKDLYQRQLEVFLDPNDPKVIEQAIKDGIPLSVIEAAQQSPVYKMA
                     MEWKLALPLHPEYRTLPMVWYVPPLSPIQSAVDAGELGSNGILPDVESLRIPVQYLAN
                     LLTAGDTKPVLRALKRMLAMRHYKRAETVDGKVDTRALEEVGLTEAQAQEMYRYLAIA
                     NYEDRFVVPSSHRELAREAFPEKNGCGFTFGDGCHGSDTKFNLFNSRRIDAIDVTSKT
                     EPHP"
     gene            complement(3407..7129)
                     /locus_tag="JNZ57_002145"
     CDS             complement(3407..7129)
                     /locus_tag="JNZ57_002145"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit alpha"
                     /protein_id="HAY8828364.1"
                     /translation="MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDK
                     IVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWY
                     LYSANRLKYPMMRKRLMKMWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVR
                     SSWQEVNELIAASNVYTIKNYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFY
                     DWYCDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGT
                     KTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRY
                     TDMPMLVMLEERDGYYAAGRMLRAADLVDALGQENNPEWKTVAFNTNGEMVAPNGSIG
                     FRWGEKGKWNLEQRDGKTGEETELQLSLLGSQDEIAEVGFPYFGGDGTEHFNKVELEN
                     VLLHKLPVKRLQLADGSTALVTTVYDLTLANYGLERGLNDVNCATSYDDVKAYTPAWA
                     EQITGVSRSQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLIFCG
                     CVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETV
                     TAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAPQLGTNPLTIAGEAEKAGMNPVD
                     YTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEFMLKYLLGTEHGIQ
                     GKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSSTCLYSDIILPTATWYEKDDM
                     NTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVGHLGKETDIVTLPIQHD
                     SAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERAYPATYERFTSIGPLMEKIGNGG
                     KGIAWNTQSEMDLLRKLNYTKAEGPAKGQPILNTAIDAAEMILTLAPETNGQVAVKAW
                     AALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNV
                     HELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQKSNGNPEKALN
                     FLTPHQKWGIHSTYSDNQLMLTLGRGGPVVWLSEADAKELGIADNDWIEVYNSNGALT
                     ARAVVSQRVPAGMTMMYHAQERIVNLPGSEITGQRGGIHNSVTRITPKPTHMIGGYAH
                     LAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGND"
     gene            complement(7645..9036)
                     /gene="narK"
                     /locus_tag="JNZ57_002146"
     CDS             complement(7645..9036)
                     /gene="narK"
                     /locus_tag="JNZ57_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate transporter NarK"
                     /protein_id="HAY8828365.1"
                     /translation="MSHSSAPERATGAVITDWRPEDPAFWQQRGQRIASRNLWISVPC
                     LLLAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPIFGGR
                     RWTAFSTGILIIPCVWLGFAVQDTSTPYSVFIIISLLCGFAGANFASSMANISFFFPK
                     QKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAVFGSQGVKQPDGTELYLANASWI
                     WVPFLAIFTIAAWFGMNDLATSKASIKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAG
                     FAMLSKTQFPDVQILQYAFFGPFIGALARSAGGALSDRLGGTRVTLVNFILMAIFSGL
                     LFLTLPTDGQGGSFMAFFAVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEGGSD
                     ERAMREAATDTAAALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIACV
                     VITWAVYGRHSKK"
     gene            9375..11171
                     /gene="narX"
                     /locus_tag="JNZ57_002147"
     CDS             9375..11171
                     /gene="narX"
                     /locus_tag="JNZ57_002147"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarX"
                     /protein_id="HAY8828366.1"
                     /translation="MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSA
                     HAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDEQLAQLQGL
                     QDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMA
                     VFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNN
                     MSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQ
                     NLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRL
                     ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERA
                     TIARELHDSIAQSLSCMKMQVSCLQMQGDALPASSRELLSQIRNELNASWAQLRELLT
                     TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS
                     NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGD
                     CRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE"
     gene            11164..11814
                     /gene="narL"
                     /locus_tag="JNZ57_002148"
     CDS             11164..11814
                     /gene="narL"
                     /locus_tag="JNZ57_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator NarL"
                     /protein_id="HAY8828367.1"
                     /translation="MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQG
                     IELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRG
                     ADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRTTTERDVNQLTPRE
                     RDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF"
     gene            complement(11815..13209)
                     /gene="ychO"
                     /locus_tag="JNZ57_002149"
     CDS             complement(11815..13209)
                     /gene="ychO"
                     /locus_tag="JNZ57_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415738.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter invasin YchO"
                     /protein_id="HAY8828368.1"
                     /translation="MSRFVPRIIPFYLLLLVAGGTANAQSTFEQKAANPFDNNNDGLP
                     DLGMAPENHDGEKHFAEIVKDFGETSMNDNGLDTGEQAKAFALGKVRDALSQQVNQHV
                     ESWLSPWGNASVDVKVDNEGHFTGSRGSWFVPLQDNDRYLTWSQLGLTQQDNGLVSNV
                     GVGQRWARGNWLVGYNTFYDNLLDENLQRAGFGAEAWGEYLRLLANFYQPFAAWHEQT
                     ATQEQRMARGYDLTARMRMPFYQHLNTSVSLEQYFGDRVDLFNSGTGYHNPVALSLGL
                     NYTPVPLVTVTAQHKQGESGENQNNLGLNLNYRFGVPLKKQLSAGEVAESQSLRGSRY
                     DNPQRNNLPTLEYRQRKTLTVFLATPPWDLKPGETVPLKLQIRSRYGIRQLIWQGDTQ
                     ILSLTPGAQANSAEGWTLIMPDWQNGEGASNHWRLSVVVEDNQGQRVSSNEITLTLVE
                     PFDALSNDELRWEP"
     gene            13393..13746
                     /gene="ychN"
                     /locus_tag="JNZ57_002150"
     CDS             13393..13746
                     /gene="ychN"
                     /locus_tag="JNZ57_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE/F sulfur relay family protein YchN"
                     /protein_id="HAY8828369.1"
                     /translation="MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSD
                     AVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLV
                     ELAQWTLSADKVLTF"
     gene            complement(13790..14485)
                     /locus_tag="JNZ57_002151"
     CDS             complement(13790..14485)
                     /locus_tag="JNZ57_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415736.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HAY8828370.1"
                     /translation="MITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDE
                     GPVWIFGYGSLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGG
                     RTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGCTVNAIVFIMDPRHP
                     EYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLA
                     ENYPDGVLRPGFA"
     gene            complement(14643..14873)
                     /gene="chaB"
                     /locus_tag="JNZ57_002152"
     CDS             complement(14643..14873)
                     /gene="chaB"
                     /locus_tag="JNZ57_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative cation transport regulator ChaB"
                     /protein_id="HAY8828371.1"
                     /translation="MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKDDRRD
                     DASREETAHKVAWAAVKHEYAKGDDDKWHKKS"
     gene            15143..16243
                     /gene="chaA"
                     /locus_tag="JNZ57_002153"
     CDS             15143..16243
                     /gene="chaA"
                     /locus_tag="JNZ57_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-potassium/proton antiporter ChaA"
                     /protein_id="HAY8828372.1"
                     /translation="MSNAQEAVKTRHKETSLIFPVLALVVLFLWGSSQTLPVVIAINL
                     LALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTL
                     MRDTLYSIIMIVTGGLVGFSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMA
                     LPAANFSTGQALLVALISAAMYGVFLLIQTKTHQSLFVYEHEDDSDDDDPHHGKPSAH
                     SSVWHAIWLIIHLIAVIAVTKMNASPLETLLDSMNAPVAFTGFLVALLILSPEGLGAL
                     KAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAFMTGNELQFALGAPEMVVMVASLV
                     LCHISFSTGRTNVLNGAAHLALFAAYLMTIFA"
BASE COUNT         3974 a         4418 c         4107 g         3949 t
ORIGIN      
        1 caaaatttga attacccctg gtggggttcc cgagcggcca aagggagcag actgtaaatc
       61 tgccgtcatc gacttcgaag gttcgaatcc ttcccccacc accatcactt ttcaaaagtc
      121 cgtaaactct caaacgaatc cgcaattaaa tattctgccc aagcggggaa ggatgagaag
      181 cttcgaccaa ggttcgactt gagcgccagc gagagagcgt tgccgcaggc aacgacccga
      241 agggcgaagc gcgcagcgct gagtaatcct tcccccacca ccatcgcttc cttgaataat
      301 caaaacctgt tactccgagc taattttgcc cgatggcacc acgtttaccg ggcctacaat
      361 atcctcccct gtaggtcgga taagcgaagc gcatccgaca actcaccccg caccgtgccc
      421 ataaaaaaac cccgccgaag cagggtctat gtgaactaaa attcgtttag tgacgagcgc
      481 gcaccagctg gtacttacgt gtcagatact ccaccggtac gctccagatg tgtaccagac
      541 gcgagaacgg gaacagcagg aataacgtca tccccagcac caggtgcaga cggaagataa
      601 acgccacacc atcgaggtgt tgagaagcgc caccgtggaa ggtcaccacc gactgcgccc
      661 agccaaccag tttcatcatc tcgctaccgt ccatatgctg agcggagaac ggaatggtca
      721 acaggcccag cgcgcactgg ataacgagca gcgacaggat caggatatcc gctccggtag
      781 tggttgcacg cacgcgtggg ctgaacagac gacgcttcag caacagcacg ccgccaatca
      841 gacacagcac gccgctggca ccaccagcaa acatcgccat tttctgtttc acttcaatcg
      901 gcagccaggc ttcatacatc cagtgcggcg tcagcatacc gaagaagtga ccaacaaaaa
      961 tccccagaat accgatatgg aacaggttcg acgccaggtt catccctttg cgatccagca
     1021 tctggctgga cgccgcgcgc caggtgtact gcccgtagtc ataacgcagc cagctaccaa
     1081 tcaggaagac cgccccggct atgtacgggt agatatcaaa gaagaacata ttcaggaatt
     1141 gcattagtgc tgtcctccgg tggtgatatt cagatattgc ggcgcgacgg caccggcaaa
     1201 gcgacgctga tgagcagtga ttgctgaatc accgcagcct ttgtcagcaa agaatttaac
     1261 ctgctcttct tcccagacag catccagcgc ctgcggcgta tcatcgcgcg cttcgtcggc
     1321 aattttttcc gccactttgt cgctgtcgat agcggtattg gccaatttca gcagcagatc
     1381 aaacatcacg gcataacggc tttcacgctg ttgcagacgc gcgctcagca atgccagaat
     1441 cggcgcgata tctttcaaac cttccacggc ttcgctttgc ggcagctgcg acaggtactc
     1501 cagatacagc ggcagatggt ccggtaattc gcggctgttt aactgcaagc cgtgctgctc
     1561 gtactgcgcc agcaggtcca ccatcgcctg gccgcggtca cgggattcac cgtgaacatg
     1621 ttcaaatagc aacagtgacg tggcgcggcc acggtcgaac agttcgctgt actgggcctg
     1681 ggcatcgagc ggatccatcg ccgttaaatc gcgcaggaaa atgcccagcg catgggcatc
     1741 ttctttcgac agatttttcg acgcagcaat cgcctcaaac atctcttgtt gatgctgcca
     1801 taaggcagca tccggatatt caaggagacg cgatacaatc acgagttcga tcatggatgc
     1861 ggctccgttt tgctggtcac atcgatggca tcgatacgac ggctgttgaa cagattgaat
     1921 ttggtatctg agccgtggca gccatcacca aaggtaaagc cgcagccatt tttctccggg
     1981 aaggcttccc gtgccagttc acgatgacta ctcggcacca caaagcgatc ttcgtagtta
     2041 gcaatcgcca gataacggta catctcctgt gcctgggctt cggtcagacc gacctcttcc
     2101 agcgcacggg tatcaacttt accgtcaacg gtttcagcac gtttgtaatg acgcatcgcc
     2161 agcatacgtt tcagtgcgcg cagtaccggt ttggtatcac cggcggtcag cagattcgcc
     2221 agatactgta ccggaatacg caagctttcg acgtctggca gaatgccgtt gctacccagc
     2281 tcacccgcgt ctactgcaga ctgaatcgga gacagaggcg gcacgtacca gaccatcggc
     2341 agtgtgcgat attctggatg cagcggcagc gccagtttcc attccattgc cattttataa
     2401 accggcgact gctgtgcggc ttcaataacg ctcagcggaa taccgtcttt aatcgcctgc
     2461 tcgatgactt tcggatcgtt cggatcgagg aacacctcca gctgacgctg gtaaagatct
     2521 ttctcgttct cggtgctggc tgcacgttca atcgcgtcgg catcgtacag cagcacgcca
     2581 agataacgga tacgaccgac acaggtttct gagcacacgg tcggctgacc cgcttcaata
     2641 cgcggatagc agaagatgca cttctcagac ttaccgctct tccagttgaa gtagattttt
     2701 ttgtacgggc atccggtgat gcacatacgc cagccacggc atttatcctg gtcgatcagg
     2761 acgatgccat cttcttcacg cttgtaaatc gcaccgctcg ggcaggtcgc cacacatgcc
     2821 gggttcaggc agtgttcgca caggcgcggc aaatacatca taaaggtgtt ttcgaactgg
     2881 ctatacatcg ccttctggat gttgtcgaag ttcttgtctt tcgccagttt gtcaaactca
     2941 ccacccaggt catcttccca gttcggccct ttttcgattt tcgccatccg ttccccggta
     3001 atcagcgaac ggggacgggc aatcggctgc gatttgctgc cttccggcgc ggtatgcagg
     3061 ttctgatagt caaaatcgaa cggctcgtaa taatcgtcga tccccggcag atgcgggtta
     3121 gcgaagattt tacccagcaa catggcacgg ttacccatgc gcggctgcag tttgccgttg
     3181 attttacgga tccagccgcc tttgtatttt tcctggtttt cccagtcagt cgggaagccc
     3241 tgacccggct tggtttccac gttgttgaac cacgcgtact ccacgccttc acggctggtc
     3301 cagacgtttt tacaggtaac tgaacaggtg tggcagccga tgcacttatc gagattcagc
     3361 accatgccga cttgtgaacg aattttcatt ttacgctctc ctgtacctag tcattgcctt
     3421 cgccatctaa ccagtcaatg ttcttcatct tacgcactac aacaaactca tcgcggttag
     3481 aacctacggt gccgtagtag ttaaagccgt atgccagatg ggcatagcca ccaatcatat
     3541 gcgtcggttt cggcgtgata cgggtgaccg agttgtggat ccccccacgc tggccagtaa
     3601 tttccgaacc cggcaggtta acgatacgtt cctgcgcgtg gtacatcatg gtcatccctg
     3661 ccggaacacg ctggctgaca accgcacggg cagtcagcgc accgttgctg ttgtaaactt
     3721 caatccagtc gttatcggca atgcccagct ctttggcatc ggcttcgctc agccagacca
     3781 ccgggccacc gcgacctaag gtcagcatca actggttgtc gctgtaggtg gagtggatcc
     3841 cccacttctg gtgcggcgtc aggaagttga gcgctttttc cgggttgccg ttggatttct
     3901 ggcctatcac ttctttcacc gaacgggtgt cgatcggcgg acgataaacc agcaggcttt
     3961 caccgaaatc acgcatccac tggtgatcct gatacagttg ctgacgacca gagagcgtac
     4021 gccatgggat cagctcgtga acgttggtgt aaccggcgtt gtaagaaacg tgttcatctt
     4081 ccagaccaga ccaggtcggg ctggagataa ttttgcgcgg ctgtgcctga atatcgcgga
     4141 agcggatctt ctcgtcttct ttattcagcg ccagatgcgt atggtcacga ccggtaaatt
     4201 cgctcagggc agcccaggct ttcacggcta cctgaccgtt ggtttccggt gccagtgtca
     4261 ggatcatctc tgccgcatca attgcggtgt tcagtatcgg ctggcctttc gccggacctt
     4321 ccgctttggt gtagttgagc ttacgcagca gatccatctc gctctgggtg ttccaggcaa
     4381 tccctttacc gccattaccg attttctcca tcagcgggcc gatagaggta aagcgttcgt
     4441 aagtcgccgg ataagcgcgc tctacgacca taatgtgtgg cgcggtttta cctgggatca
     4501 ggtcgcactc gccttttttc cagtctttca catccagcgg ctgcgccagt tcagcggcag
     4561 agtcatgctg gataggcagc gtgacgatgt cggtttcttt acccagatgg ccgacgcaca
     4621 cttcggagaa tttcttcgcg atggctttgt agatttccca gtcgcttttc gcttcccagg
     4681 ccggatcgac cgccgcagac agcgggtgaa taaacggatg catatccgaa gtattcatgt
     4741 cgtctttttc gtaccaggtc gccgtcggca aaatgatgtc ggaatagaga caggtgctcg
     4801 acagacggaa gtccagcgta accaccagat ccagcttgcc ttccagacca ttgtcctgcc
     4861 agtccacttc ttccggcttc acgccgccct gttgccccag atctttaccc tggataccgt
     4921 gctccgtccc cagcaggtac ttgagcataa actcatgacc tttaccggaa gaaccgagca
     4981 ggttagaacg ccagatgaac aggttgcgcg ggtggttttt accgttttct ggttgttctg
     5041 ccgcaaaacg gatggaaccc tctttcaggg atttcaccgt atagtccacc ggattcatcc
     5101 cggctttttc cgcttcgcca gcgatagtca gcgggttagt gcctaactgc ggtgcagacg
     5161 gcagccagcc catgcgttcc gcacggacgt taaagtcgat caagtgtccg gtatagcggg
     5221 atttgtccgc catcggtgac agcaactctt ccgccgtgac ggtttcataa cgccactggc
     5281 tggagtggtt atagaaataa gaagtgctgt tcatgtgacg cgccggacgc tgccagtcaa
     5341 gggcaaacgc cagcggctgc cagccggttt gcggacgcag tttttcctga cctacatagt
     5401 gcgcccagcc gcccccgctc tgaccgacac agccgcagaa aatcagcatg ttgatcagac
     5461 cacgatagtt catatcgagg tgataccagt ggttcagccc cgcaccaacg ataatcatcg
     5521 aacgaccgtg cgttttatca gcgttatcgg caaattcacg ggcgatgcga ataatctggc
     5581 tgcgagaaac gccggtaatc tgctcggccc aggccggggt ataagctttc acatcgtcat
     5641 agctggttgc acagttaacg tcgttcaggc cacgttccag accgtagttt gccagcgtca
     5701 gatcataaac ggtggtcacc agggcggtgc tgccatcagc cagttgcagg cgtttcaccg
     5761 gcagtttgtg cagcagcacg ttttccagtt ccactttgtt gaagtgttcc gtgccgtcgc
     5821 caccaaagta cgggaagcct acctcagcga tctcatcttg gctacccagc aggctcagtt
     5881 gcagctcggt ttcttcgcca gttttgccgt cgcgctgctc aagattccat ttgcccttct
     5941 cgccccagcg gaagccaata gaaccgttcg gcgcaaccat ttcgccattg gtattaaagg
     6001 cgacagtttt ccattccgga ttgttttcct ggcccagcgc atcaaccaga tcagcagcgc
     6061 gcagcatacg acctgcagcg tagtaaccgt cgcgttcttc cagcatcacc agcatcggca
     6121 tgtcggtgta gcgacgcaca tagtcggtga aatactggct tgggttgtcg aggtggaatt
     6181 cacgcagcat tacgtggccc atcgccagcg ccattgccgc atcggtgccc tgtttcggtg
     6241 ccagccacag atcgcacagt ttggcgattt cagcgtagtc tggtgtgacg gcaacagttt
     6301 tggtgccttt gtaacgcact tcagtaaaga agtgagcatc cggggtacgc gtctgcggca
     6361 cgtttgaacc ccaggcgatg atgtagctgg agttatacca gtcagcagat tccggtacgt
     6421 cagtttgctc gccccaggtt tgcggagacg caggaggcag gtcgcagtac cagtcgtaga
     6481 agcttaagca agtaccgcca atcagcgaga gatagcgtgc acccgatgcg taagaaacca
     6541 tcgacattgc cggaattggc gagaaaccag caacacggtc cgggccgtag tttttgatgg
     6601 tgtaaacgtt agatgcggcg atcagttcgt tcacctcctg ccaggaagaa cgaacaaatc
     6661 caccgcgtcc acgcgcctgc ttaaagcttt tcgctttatc ggcgtcttca atgatagaag
     6721 cccatgcctc aaccggatcg ctatgcagcg ccttcgcttc acgccacatt ttcatcaggc
     6781 gtttgcgcat catcgggtat ttcaggcggt tggcactgta aagataccag gagtagctgg
     6841 caccgcgcgg gcagccgcga ggttcatggt ttggcagatc cggacgggta cgcggatagt
     6901 cagtctgctg ggtttcccag gtgaccagac cgtttttgac gtagattttc cagctgcagg
     6961 agccggtgca gtttaccccg tgggtagagc ggacgatttt gtcatgctgc caacgctggc
     7021 gatatccatc ctcccagtca cggttggtat tgagaagctg gccatgccca tcggcaaagg
     7081 tttcaccctt ctgtttgaag tagcgaaacc ggtccaggaa tttactcatc ggttttctcc
     7141 tgtgggagcc tgtcggccct ctgataaatc gacattgcta atgtttaagg gcaaggtaac
     7201 gctctgaaac agcgtgggaa ttgataacga tcaagagtga tggggatgaa aaataaagta
     7261 aattcctaag ataccccttt aggataatta acagccacca cataacagac tgtaaattaa
     7321 gacgttttat acctgtagtt atttaaacta ttaagatttt tatgcagatg ggtattaagg
     7381 agtattcccc atgggtaaca tattaatggc tcttaatgaa atccggcgaa ataaaccata
     7441 taacattagt atgttgtaac taaataacgc ttaaaaaaag cgcgacatca tgccgcgcaa
     7501 aggataatca aatattttac tctatataat tcggtttaca ggaaggcggc aagtgaatga
     7561 atcccaggag cttactaaag taagtgactg gggtgaatga acgcagccgc agcacatgta
     7621 acccgaagta tgacgagtaa cggtttattt tttagaatgc cgaccatata ccgcccaggt
     7681 aatcactacg caggcgatat agaaaatcaa aaataccttc attgcgccga ctggcgaacc
     7741 cgttaatgcc agcgagctac caaacgcttt cgggataaag aagccaccaa tcgcgccaat
     7801 cgcagagatg aaacccagcg ccgccgccgt gtcggttgcc gcttcacgca tcgcacgttc
     7861 gtcagaaccc ccttctgctt tcacgcgatc cattgtcagt ttacggaaga tcactgaaat
     7921 catctggaaa gtggaaccac tacccagccc agctgtcagg aacagcgcca ggaagaccgc
     7981 gaagaacgcc atgaagcttc cgccctgccc gtcagtcggt aaggtcagga acagcaggcc
     8041 gctgaaaatc gccatcagaa taaagttcac cagcgtgaca cgagttccgc ccagacggtc
     8101 agataatgca ccacctgcag aacgcgccag cgcaccaata aacggcccga agaaagcgta
     8161 ttgcagaatc tgaacatccg ggaactgcgt ttttgacagc attgcaaagc ccgcggagaa
     8221 gccgatgaag gagccgaagg ttgccagata cagcaggctc ataatccaca gatgaccccg
     8281 tttgagtacc ggcaactgct ccttgatgga ggctttcgag gtagcaagat cgttcatgcc
     8341 aaaccacgcc gcaatggtga agatggcaag gaacggcacc catatccagg acgcattcgc
     8401 cagatacagc tcagtcccat ccggctgttt gacgccctgg ctaccaaata ctgcgaaaat
     8461 cgacagtgat accaccagcg gagcaaccaa ctgcatgacg ctgacgccca tgtttcccag
     8521 accaccattc agacccagcg cgccaccctg cttctgtttc ggaaagaaga agctgatgtt
     8581 tgccatactg gatgcgaagt tcgcgccagc aaagccgcat agcagagaga tgatgatgaa
     8641 gacgctataa ggcgtggagg tatcctgcac ggcaaaaccc agccagacgc aaggaataat
     8701 cagaataccg gtgctgaacg ccgtccagcg acgaccaccg aagataggaa ccataaagga
     8761 gtatggaaca cgtaataacg cgccagaaac cgaaggcagc gcagtcaaca taaatagctg
     8821 atcggtcgta aaattaaaac cgactttcgg taagttcacc gcaacagcgc tgaacaacat
     8881 ccatacgcaa aacgccagca gcagacaggg aacggaaatc cacaggttac ggctggcaat
     8941 acgttgaccg cgttgttgcc agaacgcagg atcttccggt cgccaatctg taatgacagc
     9001 tccagtagcc ctttcggggg cggatgagtg actcatagac acctctgata ctcgtttcga
     9061 tgtctgccac cttagtgtct gtagctaaag gcaatttgat gtaaatcaaa cgataagata
     9121 actttatcta tcattgatat ttatcattac ccatagtgag tacagtgatt tcataaaaat
     9181 tatgagattt ttcacggtgc tgtaaaatcc ctacccttac cgatgtaaag cgactaacca
     9241 cacggcaaat aaggagtaac tctttccggg tatgggtata cttcagccaa tagccgagaa
     9301 tactgccatt ccagaatgta tcatcacatt cattaaggtt attgctcatt taaagcctga
     9361 aggaagaggt ttacatgctt aaacgttgtc tctctccgct caccctggtt aatcaggttg
     9421 cgcttattgt gttgctttct actgctattg gactggcagg gatggcggtt tctggctggc
     9481 tggtgcaagg cgttcagggc agcgcccatg cgatcaacaa agcgggatcg ctgcgcatgc
     9541 aaagttaccg tctgttggcg gcagtgccat taagtgagaa agacaagccc ttaattaaag
     9601 agatggaaca aacggcattt agcgccgagt taactcgagc agcagaacga gacgaacaac
     9661 tggcgcaatt acagggttta caagattact ggcgtaatga actgatccct gcactgatgc
     9721 gtgcacaaaa ccgcgaaacg gtgtcagcgg atgtcagcca gtttgttgcc gggcttgatc
     9781 agctggtatc tggttttgac cgcaccacgg aaatgcgcat tgagacagtg gtactggtcc
     9841 atcgggtaat ggcggtattt atggcacttt tactggtgtt cactattatc tggttgcggg
     9901 cgcgactgct acaaccgtgg cggcaactgc tggcaatggc gagtgccgtc agtcatcgcg
     9961 attttaccca acgcgcgaac atcagcgggc gcaacgaaat ggcgatgctt ggaactgcat
    10021 tgaacaatat gtctgcagaa ctggccgaaa gttatgccgt acttgagcag cgggttcagg
    10081 agaaaaccgc cgggctggag cataaaaatc agatcctctc ttttttatgg caggctaacc
    10141 gccgtttgca ttcccgcgcc ccgctgtgtg aacgcctgtc acctgtactc aacggcttac
    10201 agaatttaac cctgctacgt gatatcgaac tgcgggtgta tgacactgat gatgaagaga
    10261 atcatcagga gtttacctgc cagccagata tgacttgtga tgataaaggc tgccagctct
    10321 gcccgcgcgg cgtattaccc gttggtgatc gcggcacaac cctgaagtgg cgactggctg
    10381 actctcatac gcagtacggt attttgctgg cgaccctgcc gcaggggcgt catcttagcc
    10441 atgatcaaca acaactggtg gataccctgg ttgaacaact caccgccacg ctggcgctgg
    10501 atcgccatca ggaacgtcag caacagttga tcgtgatgga agagcgtgcc accattgcgc
    10561 gcgaactgca tgattctatt gcccaatctc tctcttgcat gaagatgcag gtgagttgtt
    10621 tacagatgca gggcgatgcg ctgccagcaa gcagccgcga actgttaagt cagatccgta
    10681 acgaactgaa tgcatcctgg gcgcagttgc gtgaattgct caccacattc cgcttgcagc
    10741 tcaccgagcc tggattacgt ccggcgctgg aggcgagttg cgaagagtac agcgccaaat
    10801 ttggcttccc ggtgaagctg gattatcaat tgccgcctcg tctggtgcct tcacatcagg
    10861 caatccactt gttgcaaatt gcccgtgagg cattaagtaa cgccctcaaa cattcgcaag
    10921 cgagtgaggt cgtggtgacg gtggcgcaaa acgataatca ggtcaaactg accgtccaag
    10981 ataacggctg cggcgtgcct gaaaatgcca tccgcagcaa tcactacggc atgataataa
    11041 tgcgcgaccg tgcgcaaagt ttacgaggcg attgccgcgt ccgccgtcgt gaatcaggtg
    11101 gcaccgaagt ggtggtcacc tttattcccg aaaaaacttt cacagacgtc caaggagata
    11161 cccatgagta atcaggaacc ggctactatc ctgctgatcg acgatcaccc gatgctgcga
    11221 actggcgtaa aacagcttat cagtatggca ccagatatca ccgtggttgg cgaagcgagt
    11281 aatggcgaac agggtattga actggcggag tctcttgatc ccgatctgat cctgttagat
    11341 ctcaatatgc ccggcatgaa cggtctggaa acgctggata aactgcgcga aaagtccctc
    11401 tcagggcgca ttgtggtatt cagcgtctct aaccatgaag aagatgtggt caccgcactg
    11461 aaacgcggcg cggatggtta tctgttaaaa gatatggaac cggaagatct gctgaaagca
    11521 ttgcatcagg cagctgctgg cgaaatggta ttaagcgaag cattaacgcc tgttctggcc
    11581 gccagcttgc gcgctaaccg taccactact gagcgcgatg ttaaccagtt aaccccacgc
    11641 gagcgcgata ttctcaagct gattgcccag ggtttgccga acaagatgat tgcccgccgc
    11701 ctggatatca ccgaaagcac agtaaaagtg cacgtcaagc acatgctgaa gaaaatgaaa
    11761 ctcaagtctc gcgtggaagc agcggtatgg gtgcatcagg agcgcatttt ctgattacgg
    11821 ttcccagcgc agttcgtcgt ttgacaatgc atcgaacggt tcgacaagcg ttagcgtgat
    11881 ctcattggag gagacacgct gcccctggtt atcttccacc accaccgaca atcgccagtg
    11941 attgcttgcc ccttccccgt tctgccagtc aggcatgatc agcgtccagc cctccgcgct
    12001 gttggcttgt gcgcccggcg tcaaacttaa tatctgcgta tcgccctgcc aaatcagttg
    12061 ccgaataccg taacgactgc ggatttgtaa tttcagcggc actgtttcgc caggttttag
    12121 atcccacggc ggtgtcgcca gaaacaccgt taacgttttt cgctgtcggt actcaagagt
    12181 cggtagatta tttcgctgcg gattgtcata gcgactacca cgtaacgact gactttcggc
    12241 aacctcgccc gcagaaagtt gttttttgag cggtacacca aagcggtaat taagattcag
    12301 cccgaggtta ttttgattct cgccactttc accctgttta tgctgggccg tcacagtgac
    12361 taatggcaca ggggtgtaat ttaatcccag actcaacgcg acgggattgt gataacccgt
    12421 accagagtta aacaaatcaa cacgatcacc aaaatactgt tctaggctga cactggtatt
    12481 gaggtgttga tagaacggca tgcgcatccg agctgtcagg tcgtacccgc gcgccatccg
    12541 ttgttcctgc gtggctgtct gttcatgcca tgcagcaaac ggctgataaa agtttgccaa
    12601 taatcgcaaa tattcgcccc acgcttcggc accaaagccc gctcgctgaa gattttcgtc
    12661 cagcaagttg tcataaaaag tgttataacc caccagccag ttgccgcgcg cccagcgttg
    12721 cccaacgccc acattgctca ccaacccatt atcctgctga gtaagaccaa gctggctcca
    12781 ggtgagataa cgatcattat cttgtaacgg cacaaaccag cttccacgac tgccggtgaa
    12841 atgtccttcg ttatccactt tgacgtcaac actggcattt ccccacggtg atagccagga
    12901 ctctacgtgc tgattaacct gttgactaag cgcgtcgcgg acttttccca atgcgaaagc
    12961 ttttgcctgc tcgccagtat ccagcccgtt atcattcata ctggtttcgc cgaaatcttt
    13021 cacaatttca gcaaagtgtt tttccccatc atgattttcg ggagccatgc ctaaatccgg
    13081 cagaccatca ttgttattat caaagggatt tgccgctttt tgctcgaagg tagattgtgc
    13141 gttagctgta ccgcctgcta caagcaagag taaataaaac gggataatgc gaggaacgaa
    13201 acggctcaaa acgtcggtaa cttccggtaa taatgaaaac catagcctta aagaataacg
    13261 attactggca acttttgtcg tattttctcg cgctttcagg aaaatcctta aaaatgtgac
    13321 cgattggtca gacgctgctg aagcagtaag atagaagatg agtgtctaat tccctgaata
    13381 caggagtaaa taatgcaaaa aatcgtgatc gttgccaatg gcgcacctta cgggagcgaa
    13441 tccttgttta acagcttgcg gctggccatt gcgttacgag agcaggagag caatctggat
    13501 ctgcgtctgt tcctcatgtc tgatgcggtc acagccgggt tgcgcgggca aaaaccaggg
    13561 gaaggctaca acattcagca aatgctggag atccttaccg ctcagaatgt accggtgaaa
    13621 ttgtgcaaaa cctgtaccga cgggcgcggg attagtacac ttcctctgat tgatggggtg
    13681 gaaatcggta ctcttgtgga actggcgcaa tggacgctgt cagccgataa agtgctcaca
    13741 ttttaatgtt tgagggggcg tctgacgccc cactatgcgg gaagtttact caggcgaatc
    13801 ccggccgtaa cacaccatcc ggataattct ccgccagcag tttttttacc gataccagca
    13861 aatcattcag cccatcgtcc tgcattccca gtttgataag ctcctgttcc agtgaaaaca
    13921 ggtattgtgc gttggttccc agcggaccgc tcgccgccgc aatcaacggc gcgatgacct
    13981 gagcgcgagt gtcagattca tattctggat gtcgcgggtc cataataaac acaatggcgt
    14041 ttactgtgca tccatcatca agatcaagct gacaccaggt tggcagataa cagccggtaa
    14101 tcatctcgcg cttccacaac agggttagtt cctgctccag cgtctcttct ggcagtcgat
    14161 aggcgacgcc tgtagtgcgt ccgccctctt tcagtgcaag catccgtccc ggctggtgcg
    14221 cagtcccgcg cccggcggtc aggcgcaggc aaaacgcgcg atgccatcca accagtgtac
    14281 cggtgcacga ctcggtaaac tccagtgccg gattccacat caacgatcca taaccgaaga
    14341 tccacaccgg tccctcatca ggtcgacaag ccagcgtcgc cgccagcgaa gccgctcgtt
    14401 gctctgctga ccataagagt gattcttcaa tggcaccaaa tgccgtttta caatcggcat
    14461 tcatcaagaa atcacgcgtt atcaccttac acctccgcca ctgcatactt ccctgcgaca
    14521 actttttggt gtcttccgga catttttact gctcattttg aaaccactaa cgggacaata
    14581 tgcaatccac ggaccacttg caaggcaaca ccgcacgaat agctttaact aagctaccgg
    14641 ttttacgatt ttttatgcca tttatcatca tcccctttgg catattcatg cttcacagca
    14701 gcccaggcca ctttatgcgc ggtttcttcg cggctggcgt catcacgccg atcgtcttta
    14761 tctttatatt gatcccatgc gctgttgaac gcttctttat agatatcctg ggcatgagac
    14821 ggtagaacgt gctttacgct ttccggcaga tcgcttttcg ttttatacgg catcgttgac
    14881 tccttttaca aagttgaaca ttaagtgtgg tcaacaatat ctactcttgc caaaacataa
    14941 gaattttcat gtcagactgt tcttaagaaa cgctaaaaca aacattgtct aaacgtaata
    15001 cttattttta tgtcccaatg agtaaaaaat cgatagcggg gtaaaaattc gtaaaatgtt
    15061 accgatatcc agacactttc tgttattttt cctacctatt ttttacattt tcgataaatt
    15121 catctgcaaa gggataacca taatgtcaaa tgctcaagag gcggtaaaaa cccgccacaa
    15181 ggagacttcg cttattttcc cggttctggc gctggtagtg ctgttcctgt ggggaagcag
    15241 ccagacacta ccagtggtca ttgccatcaa tcttcttgcg cttattggta ttttaagtag
    15301 cgcctttagt gttgtccgtc atgcggacgt attagcccat cgcctgggag aaccttacgg
    15361 ttcgcttatt cttagccttt cagtggttat tcttgaagtc agtttgattt cagctttaat
    15421 ggcaaccggc gacgccgcgc caacgctaat gcgtgatacg ctctattcaa tcattatgat
    15481 tgttaccggt gggctggttg gcttttcatt attgttgggc ggtcgtaagt ttgccaccca
    15541 atatatgaat ctgtttggta tcaagcagta tttaattgcg ctgttccccc tggcgataat
    15601 cgtactggta tttccaatgg ctctgcctgc ggcgaatttt tcaaccggtc aggcgttact
    15661 ggtagcatta atttctgcgg caatgtatgg cgtatttttg ctgatccaga ccaaaacgca
    15721 tcaaagtttg tttgtctacg agcacgaaga tgacagtgat gacgacgacc cgcatcacgg
    15781 taaaccgtct gcccatagca gcgtgtggca tgctatctgg ttgattatcc atctgattgc
    15841 cgttattgca gtcaccaaaa tgaatgccag cccgctggag acattgctcg acagcatgaa
    15901 tgcccctgtc gcctttactg gcttcctggt ggctctgttg attctgtcgc cggaaggttt
    15961 aggtgcgtta aaagcagtgt tgaacaacca ggtccagcgc gcgatgaatc tgttctttgg
    16021 ttcagtgtta gcaaccattt cgcttaccgt acctgtcgtc acgctaattg cctttatgac
    16081 gggtaacgaa ttacagtttg cacttggtgc gccagaaatg gtggtgatgg tggcctcttt
    16141 agtgctgtgc catatctcct tctccaccgg acgtactaac gtgctcaatg gcgcagcgca
    16201 tctggcactg tttgccgcct atttgatgac gatatttgcc tgacagttat atctcctccg
    16261 atgacggaaa tcgggggaga taagataaat tcctgcttat tgtatttctt catactacct
    16321 agacagctcg ttaatcagaa ttgcgagcct gtaccacaac ctgcacgaaa ccactgcaac
    16381 agctgttgaa aagccggaat gtactcttta ttgcaaacat ttcagggatg aagtgaagat
    16441 gaattgag
//
LOCUS       DADMHC010000080        16355 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.080, whole genome shotgun sequence.
ACCESSION   DADMHC010000080 DADMHC010000000
VERSION     DADMHC010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16355)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16355)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16355
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.080"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(1..322)
                     /locus_tag="JNZ57_002154"
                     /pseudo
     CDS             complement(1..322)
                     /locus_tag="JNZ57_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707590.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(267..646)
                     /locus_tag="JNZ57_002155"
                     /pseudo
     CDS             complement(267..646)
                     /locus_tag="JNZ57_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001014786.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YdiL family protein"
     gene            complement(782..889)
                     /gene="rprA"
                     /locus_tag="JNZ57_002156"
     ncRNA           complement(782..889)
                     /ncRNA_class="antisense_RNA"
                     /gene="rprA"
                     /locus_tag="JNZ57_002156"
                     /product="antisense sRNA RprA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00034"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00034"
     gene            complement(1075..2187)
                     /gene="ydiK"
                     /locus_tag="JNZ57_002157"
     CDS             complement(1075..2187)
                     /gene="ydiK"
                     /locus_tag="JNZ57_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter YdiK"
                     /protein_id="HAY8828373.1"
                     /translation="MVNVRQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTV
                     VIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISS
                     GDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHI
                     GRFMVHCALMLLFSALLYWRGEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGV
                     VVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTT
                     WGTVLLVWSGVVGTLDNVIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLL
                     AVSWRLFAAWVEEVPPPTDQPEEILEELGEIEKPNK"
     gene            2576..5632
                     /locus_tag="JNZ57_002158"
     CDS             2576..5632
                     /locus_tag="JNZ57_002158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HAY8828374.1"
                     /translation="MIPQISQAPGVVQLVLNFLQELEQQGFTGDTATSYADRLTMSTD
                     NSIYQLLPDAVVFPRSTADVALIARLAAQERYSSLIFTPRGGGTGTNGQALNQGIIVD
                     MSRHMNRIIEINPEEGWVRVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINT
                     DASGQGSLVYGKTSDHVLGVRAVLLGGDILDTQPLPVELAETLGKSNTTIGRIYNTVY
                     QRCRQQRQLIIDNFPKLNRFLTGYDLRHVFNDEMTEFDLTRILTGSEGTLAFITEARL
                     DITRLPKVRRLVNVKYDSFDSALRNAPFMVEARALSVETVDSKVLNLAREDIVWHSVS
                     ELITDVPDQEMLGLNIVEFAGDDEALIDERVNALCARLDELIASHQAGVIGWQVCREL
                     AGVERIYAMRKKAVGLLGNAKGAAKPIPFAEDTCVPPEHLADYIAEFRALLDSHGLSY
                     GMFGHVDAGVLHVRPALDMCDPQQEILMKQISDDVVALTAKYGGLLWGEHGKGFRAEY
                     SPAFFGEELFAELRKVKAAFDPHNRLNPGKICPPEGLDAPMMKVDAVKRGTFDRQIPI
                     AVRQQWRGAMECNGNGLCFNFDARSPMCPSMKITQNRIHSPKGRATLVREWLRLLADR
                     GVDPLKLEQELPESGVSLRTLIARTRNSWHANKGEYDFSHEVKEAMSGCLACKACSTL
                     CPIKIDVPEFRSRFLQLYHTRYLRPLRDHLVATVESYAPLMARAPKTFNFFINQPLVR
                     KLSEKHIGMVDLPLLSVPSLQQQMVGHRSANMTLEQLESLNAEQKARTVLVVQDPFTS
                     YYDAQVVADFVRLVEKLGFQPVLLPFSPNGKAQHIKGFLNRFAKTAKKTADFLNRMAK
                     LGMPMVGVDPALVLCYRDEYKLALGEERGEFNVLLANEWLASALESQPVATVSGESWY
                     FFGHCTEVTALPGAPAQWAAIFARFGAKLENVSVGCCGMAGTYGHEAKNHENSLGIYE
                     LSWHQAMQRLPRNRCLATGYSCRSQVKRVEGTGVRHPVQALLEIIK"
     gene            5629..6039
                     /gene="menI"
                     /locus_tag="JNZ57_002159"
     CDS             5629..6039
                     /gene="menI"
                     /locus_tag="JNZ57_002159"
                     /EC_number="3.1.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA hydrolase"
                     /protein_id="HAY8828375.1"
                     /translation="MIWKRKITLEALNAMGEGNMVGFLDIRFEHIGDDTLEATMPVDS
                     RTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREGRVRGIC
                     KPLHLGSRHQVWQIEIFDEKGRLCCSSRLTTAIL"
     gene            6139..6327
                     /locus_tag="JNZ57_002160"
     CDS             6139..6327
                     /locus_tag="JNZ57_002160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416200.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828376.1"
                     /translation="MSTQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTL
                     SSAELKEEIYFAWRLGVH"
     gene            6874..7242
                     /gene="sufA"
                     /locus_tag="JNZ57_002161"
     CDS             6874..7242
                     /gene="sufA"
                     /locus_tag="JNZ57_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold SufA"
                     /protein_id="HAY8828377.1"
                     /translation="MDMHSGTFNPQDFTWQGLTLTPAAAIHIRELVAKQPGMVGVRLG
                     VKQTGCAGFGYVLDSVSEPDKDDLLFEHDGAKLFVPLQAMPFIDGTEVDFVREGLNQI
                     FKFHNPKAQNECGCGESFGV"
     gene            7251..8738
                     /gene="sufB"
                     /locus_tag="JNZ57_002162"
                     /pseudo
     CDS             7251..8738
                     /gene="sufB"
                     /locus_tag="JNZ57_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416198.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
     gene            8748..9494
                     /gene="sufC"
                     /locus_tag="JNZ57_002163"
     CDS             8748..9494
                     /gene="sufC"
                     /locus_tag="JNZ57_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008500629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HAY8828378.1"
                     /translation="MLSIKDLHVSVEDKAILRGLSLAVRPGEVHAIMGPNGSGKSTLS
                     ATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTA
                     LNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMA
                     VLEPELCILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHV
                     LYQGRIVKSGDFTLVKQLEEQGYGWLTEQQ"
     gene            9469..10740
                     /gene="sufD"
                     /locus_tag="JNZ57_002164"
     CDS             9469..10740
                     /gene="sufD"
                     /locus_tag="JNZ57_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HAY8828379.1"
                     /translation="MAGLPNSSNALQQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTR
                     KHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSDAIE
                     GSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMYITQG
                     VAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKL
                     AFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP
                     VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNN
                     LLMGKLAEVDTKPLLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYA
                     FAAELTEALRDEGLKQQVLARIGQRLPGGAR"
     gene            10737..11957
                     /gene="sufS"
                     /locus_tag="JNZ57_002165"
     CDS             10737..11957
                     /gene="sufS"
                     /locus_tag="JNZ57_002165"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase SufS"
                     /protein_id="HAY8828380.1"
                     /translation="MTFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEA
                     EFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVA
                     NSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLHTL
                     FDEKTRLLAITHVSNVLGTENPLAGMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCD
                     FYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEA
                     GTPNTGGIIGLGAALEYVSVLGLNNIAEYELNLMHYALSQLESVPNLTLYGPQNRLGV
                     IAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVD
                     RLVTGLQRIHRLLG"
     gene            11970..12386
                     /gene="sufE"
                     /locus_tag="JNZ57_002166"
     CDS             11970..12386
                     /gene="sufE"
                     /locus_tag="JNZ57_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfuration protein SufE"
                     /protein_id="HAY8828381.1"
                     /translation="MALLPDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRDEDRSP
                     QNSIQGCQNQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDV
                     RPWFEKMALTQHLTPSRSQGLEAMIRAIRAKAAALS"
     gene            12535..13538
                     /gene="ldtE"
                     /locus_tag="JNZ57_002167"
                     /pseudo
     CDS             12535..13538
                     /gene="ldtE"
                     /locus_tag="JNZ57_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707577.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase LdtE"
     gene            complement(13602..13838)
                     /locus_tag="JNZ57_002168"
     CDS             complement(13602..13838)
                     /locus_tag="JNZ57_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006675846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major outer membrane lipoprotein"
                     /protein_id="HAY8828382.1"
                     /translation="MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQL
                     SNDVNAMRSDVQAAKDDAARANQRLDNMATKYRK"
     gene            complement(14149..15561)
                     /locus_tag="JNZ57_002169"
     CDS             complement(14149..15561)
                     /locus_tag="JNZ57_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010346010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase I"
                     /protein_id="HAY8828383.1"
                     /translation="MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHG
                     QRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGN
                     SEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNL
                     PGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHII
                     SKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVIT
                     ATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICER
                     TDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFP
                     DATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVV
                     MVSGALVPSGTTNTASVHVL"
     gene            16118..16327
                     /gene="fumD"
                     /locus_tag="JNZ57_002170"
     CDS             16118..16327
                     /gene="fumD"
                     /locus_tag="JNZ57_002170"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase FumD"
                     /protein_id="HAY8828384.1"
                     /translation="MGNQTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTA
                     LANKRIQRSELDKQAMETVINALVK"
BASE COUNT         4171 a         3931 c         4302 g         3951 t
ORIGIN      
        1 gtgcagagtt aaatacatta gcccagatgg gccggaccat ttttttcagt agtgcggcaa
       61 aaataaagac acagaccaac gagcccatac tgtaataaga gatggttttt aatgcctcag
      121 cttctgacat accagcaaaa gccatcgcat atttgggcat ccacaccaca atcacataaa
      181 aggtcgagaa tgcggctaca ccgaacagta ccgatgaaac accttccagc cagactaacg
      241 gtttgctgtt catttgcggt aattcattag ctacgctggc gtccaccaac tggctgggga
      301 atttgctttt caacagcatt accttcagcg gctaccgatt gatagatctt ccagtcaata
      361 aaattgccat cagggtagac tcgttgaaat gcggttaagt cggggaaaaa acgcatggtg
      421 ttgttgccga tgcggttatt tattttctct atgatggcat gaagatgttt ttttctttgc
      481 tgacgcatag ccaacagttg ctcgactaca cgatcaggaa tggcacactt gccattttcc
      541 cactgacgcc agctttcact gtcaccggtc tgggcaatcc aggtgcgcat tcatcaatag
      601 tcatggcaaa aatatggcgg agtgcctgga gttcataagc gttcatcgtg taatggctgc
      661 atgaaataaa caataaaata taaataacat tatcagcctg ctgacggctt gaagagagtc
      721 acagtatctt gtgcaacatt attggaaaga gtgaggggcg aggtagcgaa gtggaaaaat
      781 gttaaaaaaa agcccatcgt gggagatggg caaagactac acacagcaat tcgttgtttc
      841 actcagggga tttccatgct tataaatcaa tatgttgatt tataaccgtg agctaatagt
      901 aggcatacgg actttttgcg tcgatcagat tcgtctcatt agtttaaaaa ctgtaaagaa
      961 tttgcgacag gtactaccag ctgaatggcg gtaagcagga aaatatgggg aagagcaagc
     1021 aaatatcaat tagcgggggt taacaatcag gcggcagagc cgcctgatga gaaattactt
     1081 attcggtttc tcgatttcgc caagttcttc gagaatttct tccggttggt ccgtcggcgg
     1141 cgggacttct tccacccacg cggcaaacag acgccaggaa acggctaaca gaaccggacc
     1201 aataaacaga ccgatcatcc cgaaagcaat caaaccacca ataacaccag agaggatcag
     1261 gatcagcggt aaatcggcac ccatgcgaat taacattggg cggatgacgt tatccagcgt
     1321 gccaaccaca ccgctccaca ctaacaatac cgttccccag gtggtatcgc cagtccagta
     1381 gagccagata atcgccggaa tcagtaccgg caacgggcca agctggacaa ggcaggagag
     1441 gatcattaac accgttagca acgttgcata aggtacgccg gatacggcga ggccgatacc
     1501 gccaagcact gcctgtacta acgccgtcac caccacaccc agcgccaccg cgcggatagc
     1561 ctgtgccgcc agcagtacgg cggcatctcc gcgaacgcct gccagacggg ttgcaaaatg
     1621 gcgaatgcct tgtgccacct gttcaccgcg ccagtacagc agggcactga agagaagcat
     1681 cagcgcacaa tgcaccataa agcgcccgat atgcgccgcc tgcccaacga accaggtggt
     1741 ggtggtgcca atataagggc ggactttcgc catgatcgcc gtccccccca tatccagcaa
     1801 gttgtgccag cctgcataca gcttcgcgcc aatcaccgga atggtattaa gccacgccag
     1861 atcgggtaac gtcatgtcgc cgctggaaat ggctttaatt agcgggccgc tgccgtcgac
     1921 gatactgtta accagcaaag caatagggat gataaacacc atcactaata acagcgtcat
     1981 caccagaacg gcgagagagc ggcggccaaa catgatcttt tgcaaacgta acaataccgg
     2041 ccaggtggcg ataaccaccg taccggccca tgcaaagccg agaataaagg gttgaacaat
     2101 ccacagacat gccacaatca tgatggctaa aaacagcacc gaaagcagaa tttgtgcgac
     2161 atccctgggc tgacgaacat ttaccataac tacttttcac cttttttgtg cgtcaaatcg
     2221 tcgacgcgac gtgaacacgc gaaactcacc tgcataatga tgagcaattt cagcggtttt
     2281 taacaggccg attctgccct taattctgat gggcgtgtta gaaaaaaatg tggtacaaca
     2341 actcaggcaa cacgcaaacg atttactcgt cgtatttcaa gttgcatgtg ctgcggctac
     2401 gttcgttcac cccagtcact tactattgta agctcctgga gttcactcgc ttgccgcctt
     2461 cctgcaactc gaaatccata gagtaaataa acatctcctt tcagtgcgct attgcagccg
     2521 cctgaaagaa tagtgtatcg acctacatca cagaccgcag gaaaggggca atataatgat
     2581 tccacagatt tcccaggcac ccggcgtcgt tcaactggtg cttaattttt tgcaagagct
     2641 ggagcaacaa ggttttaccg gcgatacggc gacaagttat gccgatcgtc tgacaatgtc
     2701 gaccgacaac agtatttacc aacttctccc cgatgcggtg gtatttccgc gttcaaccgc
     2761 agatgtggcg ctgatcgccc gtcttgccgc gcaggaacgc tattcatcgc tgatctttac
     2821 cccccgcggc ggcggcaccg gcactaacgg tcaggcgctc aaccagggga ttattgttga
     2881 tatgtcccgc catatgaacc gcatcatcga aattaaccct gaagagggct gggtgcgcgt
     2941 tgaggccggg gtgataaaag atcaactcaa tcagtacctg aaaccgttcg gctacttttt
     3001 tgcgccggaa ctttcgacca gcaaccgggc aacgctcggt gggatgatca ataccgatgc
     3061 atccggtcag ggatcgctgg tctatggcaa aacgtcagat cacgtacttg gcgtacgcgc
     3121 ggtgttgttg gggggcgata ttctcgatac gcaaccttta cccgtcgaat tggcggaaac
     3181 gctgggtaaa tccaatacca caatcgggcg aatttataac acggtttatc aacgttgccg
     3241 tcagcaacgc cagttaatta tcgacaactt ccccaaactt aaccgctttc ttaccggtta
     3301 cgatctgcgt catgtcttta acgatgagat gaccgagttc gacctgacgc gcattctgac
     3361 gggttcagaa gggacgctgg cctttattac cgaagcgcgg ctggatatta cgcgcttgcc
     3421 taaagtgcgc cgtctggtga acgtcaaata tgactctttt gactctgcgc tgcgtaacgc
     3481 gccgtttatg gttgaggcgc gggcgctttc ggtagagacg gtggactcaa aagtgctgaa
     3541 tctggcgcgg gaagatattg tctggcattc cgtcagcgag ttgattaccg atgtgcctga
     3601 ccaagagatg ctcgggctga acattgtgga atttgctggt gatgatgagg cgctgattga
     3661 tgagcgggta aatgcactct gtgcgcggtt ggatgagctg atcgccagtc atcaagcagg
     3721 tgtcatcggc tggcaggtgt gccgtgagct ggcgggggtt gaacgtatct atgcaatgcg
     3781 caaaaaagcc gttggtctgc ttggcaatgc caaaggtgcc gctaagccaa ttccgtttgc
     3841 tgaggatacc tgcgtaccac cggaacacct ggcggattat attgctgaat ttcgcgcgct
     3901 gctcgacagc cacggcttaa gctacggtat gttcggtcac gtcgacgcag gtgtcttgca
     3961 cgtccgtcca gcgctggata tgtgcgatcc tcaacaagag attttgatga agcaaatctc
     4021 tgatgacgtg gtggcgctga ctgcgaaata cggtggtttg ttgtggggcg agcacggcaa
     4081 aggttttcgc gctgaataca gcccggcgtt tttcggtgag gaactttttg cagaactgcg
     4141 caaagtgaaa gcggcatttg acccgcataa ccgactcaac ccagggaaga tttgcccgcc
     4201 agaaggtctc gatgcgccga tgatgaaagt ggacgcggtg aagcgcggta cattcgatcg
     4261 gcagatcccc attgcggtac gccagcagtg gcgcggtgcg atggagtgta acggcaacgg
     4321 tttatgcttc aactttgatg cccgtagtcc gatgtgtccg tcgatgaaga tcacccagaa
     4381 ccggattcat tcaccgaaag ggcgcgcaac gctggtgcgt gaatggctgc gtttgttggc
     4441 ggatcgcggc gttgatccac tcaaactgga acaagaactg cctgaatccg gcgtcagttt
     4501 gcggacgtta attgcccgca cgcgcaatag ctggcatgcg aataaaggcg aatatgactt
     4561 ctcacacgaa gtcaaagagg cgatgtcggg ctgtctggcc tgtaaagcgt gttcgaccct
     4621 gtgccccatc aaaattgatg tgccggagtt tcgctctcgt tttctgcagc tctatcacac
     4681 ccgttattta cgcccgctgc gcgaccacct cgtcgctacg gtcgagagct acgcgccgct
     4741 gatggcacgc gcgccgaaaa cctttaactt cttcattaac cagccgctgg tgcgcaaact
     4801 ctcggaaaaa catatcggca tggttgattt gccgctgctg tcggtcccct cgctacaaca
     4861 acaaatggtg gggcatcgct cggcaaacat gacgctggaa cagcttgaat ctctcaatgc
     4921 agagcagaaa gcgcgcacag tgttggtggt gcaggacccc tttaccagct attacgatgc
     4981 gcaagtggtg gcggattttg tccgtctggt cgaaaaatta ggtttccagc ctgtgttact
     5041 gccattttcg ccaaatggca aagcccagca tattaaaggt tttcttaatc gttttgcgaa
     5101 gacggcgaaa aagacggcgg atttcctcaa ccgtatggcg aagctgggta tgccaatggt
     5161 gggcgtcgat ccggcgctgg tactttgtta tcgcgatgaa tataaactgg cgctgggcga
     5221 ggagcgtggc gagtttaacg tcttactggc gaatgaatgg ctggcaagcg cacttgagtc
     5281 acagccagtg gctacagtca gcggtgaatc atggtatttc tttggtcact gtaccgaagt
     5341 taccgccttg ccgggtgcgc cagcacaatg ggccgcgata tttgcccgtt ttggcgcgaa
     5401 actggaaaat gtcagcgtgg gttgctgcgg catggcaggg acttacggac atgaagcgaa
     5461 aaaccatgaa aattcgctcg ggatctatga gttatcctgg catcaggcta tgcagcgact
     5521 gccgcgtaac cgctgtctgg cgaccggata ttcctgccgt agccaggtaa aacgggttga
     5581 aggcacgggg gtacgccatc ctgtgcaggc tttactggag attattaaat gatatggaaa
     5641 cggaaaatca ccctggaagc actgaatgct atgggtgaag gaaacatggt ggggttcctg
     5701 gatattcgct ttgaacatat tggtgatgac acccttgaag cgacaatgcc agtagactcg
     5761 cggacaaagc agcctttcgg gttgctgcat ggaggagcat ccgtggtact ggccgaaagt
     5821 atcggttccg ttgccggtta tttatgtacc gaaggtgagc aaaaagtggt tggtctggaa
     5881 atcaatgcta atcacgtccg ctcggcacga gaagggcggg tgcgcggcat atgtaaaccg
     5941 ttgcatctcg gttcgcgtca ccaggtctgg cagattgaaa tcttcgatga gaaagggcgt
     6001 ttgtgctgtt cgtcacgatt gacgaccgcc attttgtgac gttgtcacca gaaaagtgtg
     6061 acgcatattg cttttggtca ttatctgcac agtaaacggt ggtatactgt acacgtcttg
     6121 tctaaaagcg aggatgctat gtctactcaa cttgatccca cccagctggc cattgaattt
     6181 ttacgccgtg accagagcaa tctttcacct gcccaatatc tcaaacgtct gaaacaacta
     6241 gaacttgaat ttgctgacct gcttactctc tcttctgctg aattaaaaga agaaatctac
     6301 tttgcctggc gtctgggcgt gcattgatcc tgacttaatg ccgcaagttc gccaaatcga
     6361 cctggattaa cctccgtcca ggttcgatga ccttcttaat actgcttatc taccgcctga
     6421 tattgttcaa aaataatact aatcgcagtt tgtgttaaaa cggcgggtta gctttatgag
     6481 attattctta tcgccccttc aagagctaag ccactgagag tgccggagat aagcgccgga
     6541 tggggtagaa acccttaagc ctgtgtcgca cagacttaag ggttttctta tttctgaacg
     6601 ctgcactttt ttacctatct cttaaatagt cattttaata caactttttc tttttcatca
     6661 cagccttaat ggtccttaga taataaccat tatctaacaa tgagatacct aattcttagc
     6721 gtgcctgtta acccacacat cagggtctat gcttattaaa agcaggcaaa aagcatgttt
     6781 tacggtaaag cccctgcgtt tgctgagttg aactgataat cattatcact aacatgctgt
     6841 tatacgctga aagcgatgaa gtgaggtaaa tcgatggaca tgcattcagg aacctttaac
     6901 ccacaagatt tcacctggca aggcttaacg ctgacacccg cagcggcgat acacatccgt
     6961 gagctggtgg caaagcagcc gggtatggtc ggcgtgcgct taggcgtgaa gcaaacgggc
     7021 tgcgcgggct ttggctatgt gctcgacagt gttagcgagc cggacaaaga cgatctgctg
     7081 tttgaacacg acggcgcgaa gctgtttgtc ccgctgcaag cgatgccgtt tattgatggc
     7141 acggaagtcg atttcgttcg tgaaggactt aatcagatat tcaaatttca caaccctaaa
     7201 gcccagaatg aatgtggctg tggcgaaagc tttggggtat aggcggtact atgtctcgta
     7261 atactgaagc aactgacgat gtcaaaacct ggaccggcgg cccgctgaat tataaagaag
     7321 gattcttcac tcagttagcc accgatgagc tggcaaaggg gataaacgaa gaggtggtgc
     7381 gcgcaatttc ggcgaagcgt aatgagccgg agtggatgct ggagtttcgt ctaaacgcct
     7441 atcgcgcata gctggagatg gaagaaccgc actggttgaa agcgcactac gacaagctga
     7501 attatcagga ttacagctac tactcagcac catcgtgcgg taattgtgac gacacttgcg
     7561 cgtctgaacc tggcgcggtg cagcaaactg gcgcgaacgc ctttttaagt aaagaggtgg
     7621 aggcggcgtt tgagcagttg ggcgttcccg tgcgggaagg caaagaggtg gcggtggatg
     7681 ccattttcga ctctgtttcg gttgccacta cttatcgcga aaaactggcg gagcagggaa
     7741 ttattttctg ttcctttggt gaggcgatcc acgatcaccc ggaactggtg cgtaaatatc
     7801 tcggcaccgt ggtgccgggg aatgacaact tctttgccgc gcttaatgcg gcggtagcct
     7861 ctgacggtac gtttatttat gtgcctaaag gcgtgcgctg cccgatggaa ctttccacct
     7921 attttcgcat taacgcggaa aaaaccgggc agtttgagcg caccattctg gtggccgacg
     7981 aaggcagcta cgtcagctac attgaaggct gttccgctcc ggtgcgtgac agctatcagt
     8041 tacacgcggc agtggtggaa gtcatcatcc ataaaaacgc cgaggtgaaa tattccacgg
     8101 tacaaaactg gttccctggc gataacaaca ccggcggtat tctcaacttc gtcaccaagc
     8161 gtgctttgtg cgaaggcgaa aacagcaaaa tgtcatggac gcaatcagaa accgggtccg
     8221 cgattacgtg gaaatatccc agctgcattt tgcgcggcga taactccatt ggtgagtttt
     8281 actcagtggc gctgaccagc ggtcatcagc aagcggatac cggcaccaag atgatccaca
     8341 tcggtaaaaa caccaaatcg accattatct cgaaagggat ctctgccgga catagtcaga
     8401 acagttatcg cggcttagtg aaaatcatgc cgacggcaac caatgcgcgc aatttcactc
     8461 agtgcgactc aatgctgatt ggcgctaatt gtggggcgca taccttcccg tatgtcgaat
     8521 gtcgcaataa cagcgcacaa ctggagcacg aggcaacgac atcacgtatt ggtgaagatc
     8581 aactgtttta ctgcctgcaa cgcgggatca gcgaagaaga cgccatctcg atgattgtta
     8641 acggtttctg caaagacgtg ttctcagaac tgccgctgga atttgccgtt gaagcacaaa
     8701 aactcctcgc catcagtctt gaacacagcg tcggataagg aataaacatg ttaagtatta
     8761 aagatttaca cgtcagcgtg gaagataaag ctatcctgcg tggattaagc ctcgccgttc
     8821 gtcccggcga agttcacgcc attatggggc caaacggttc gggcaaaagt accttatcgg
     8881 caacgcttgc cgggcgcgaa gattatgaag tgacgggcgg cacggttgag ttcaaaggca
     8941 aagatttgct tgcactgtcg ccggaagatc gtgcaggcga aggcatcttt atggccttcc
     9001 agtatccggt ggagattcca ggcgtcagta accagttttt cctgcaaacg gcacttaatg
     9061 cagtgcgcag ctatcgcggc caggaaacgc tcgaccgctt tgattttcag gatttgatgg
     9121 aagagaaaat cgctctcctg aagatgccgg aagatttatt aacccgttcg gtaaacgttg
     9181 gtttttccgg cggcgagaaa aagcgcaacg atattttgca aatggcggtg ctggaaccgg
     9241 agttatgcat tcttgatgag tcggactccg ggctggatat tgacgcatta aaagtggtcg
     9301 ccgatggcgt gaactccctg cgtgatggca agcgctcatt catcattgtt acgcactacc
     9361 aacgcattct cgactacatc aagcctgatt acgtccatgt gctatatcag ggacgaattg
     9421 tgaaatccgg cgatttcacg ttggtcaaac aactggagga gcagggttat ggctggctta
     9481 ccgaacagca gtaacgcgct gcaacagtgg catcacttgt ttgaagctga agggacaaaa
     9541 cgctccccgc aagcacagca gcatttacaa caattgctgc gtaccggact gccgacacgt
     9601 aaacatgaaa actggaaata tacgccgctg gaagggctga ccaatagcca gtttgtcagc
     9661 attgcggggg agatatcccc acagcagcgt gatgccttag cgttaacgtt agacgccgtg
     9721 cggctggtgt ttgtcgatgg acgttacgtg cccgcgctga gcgatgcaat tgaaggcagc
     9781 ggatatgaag tgagcattaa cgacgaccgt caggggttac ccgacgctat tcaggcggaa
     9841 gtgtttctgc atttgacgga aagcctggca caaagcgtga cgcatatcgc cgtgaagcgc
     9901 ggtcaacggc cggcaaagcc attgctgtta atgtatatca cccagggcgt ggcaggtgaa
     9961 gaggtgaaca ctgcccatta ccggcatcat ctggatctgg cggaaggtgc cgaagcaacg
    10021 gtgatcgaac attttgtcag ccttaatgat gctcgtcatt ttaccggggc acggttcact
    10081 atcaatgtcg cagcgaacgc ccacttgcag catatcaagc tggcgtttga aaacccgctc
    10141 agtcaccact ttgctcataa cgatttgttg ctggctgagg atgccaccgc atttagccat
    10201 agtttcctgc tgggtggcgc agtgttacga cacaacacca gtacgcaact caatggagaa
    10261 aacagcacgc tgcggatcaa tagcctggcg atgccggtga aaaacgaggt gtgtgatacc
    10321 cgtacctggc tggaacacaa taaaggtttt tgtaacagcc gacagttgca caaaactatc
    10381 gtcagcgaca aaggccgcgc ggtatttaac ggtttgatca acgtcgcgca gcacgccatc
    10441 aaaacggatg gtcagatgac caacaataat ctgctgatgg gcaaactggc ggaagtggat
    10501 acgaaaccgc tgctggaaat ctatgcagat gatgtgaaat gcagccacgg cgcgacggtg
    10561 gggcgtattg atgatgaaca gatgttctat ctgcgctcgc gcgggatcaa tcagcaggat
    10621 gcccagcaga tgatcattta cgcctttgct gccgaactga cggaagcact gcgtgatgag
    10681 gggcttaaac agcaggtgct ggcccgaatc ggtcaacggc tgccaggagg tgcaagatga
    10741 ctttttccgt cgacaaagtg cgggccgact ttccggtgct ttcgcgtgag gtaaacggtt
    10801 tgccgctggc ttatctcgac agcgccgcca gtgcacagaa accgagccag gtgattgacg
    10861 ccgaggccga gttttatcgt catggctacg cggcggtgca tcgcggtatt cataccttaa
    10921 gcgcccaggc gaccgagaaa atggagaacg tgcgcaagcg ggcatcgctg tttattaatg
    10981 cccgttcggc ggaagagctg gtgttcgtcc gcggcacgac ggaagggatc aatctggtcg
    11041 ccaatagctg gggcaacagc aatgtgcggg cgggcgataa catcatcatc agtcagatgg
    11101 agcaccacgc taacattgtc ccctggcaga tgctttgcgc acgcgttggc gcagagctgc
    11161 gtgtgatccc tctcaacccc gacggtacgc tgcaactgga gacgctgcat acgctgtttg
    11221 atgagaaaac tcgcctgctg gcaattactc atgtctccaa cgtgcttggc acagaaaatc
    11281 cactggcggg aatgatcacg cttgcgcacc agcatggcgc aaaagtgctg gtggatggcg
    11341 ctcaggcggt gatgcatcat ccggtggatg ttcaggcgct ggattgcgat ttttacgtgt
    11401 tttccgggca taaactgtat ggccccaccg ggattggcat tctttatgtc aaagaagcct
    11461 tgttgcagga gatgccgccg tgggaagggg gcggttctat gatcgccacc gtcagcctga
    11521 gtgaaggcac tacctggacc aaagcaccat ggcggtttga agccggtaca cccaataccg
    11581 ggggcatcat tggtcttggc gcggcgctgg aatatgtttc ggtgctgggg cttaataaca
    11641 tagccgagta tgaactgaat ctgatgcatt acgcgctatc acagctggaa tctgtaccga
    11701 atctcactct ctatggccca caaaacaggc ttggcgttat tgcttttaat ctcggaaaac
    11761 accacgccta tgatgttggc agttttctcg ataattacgg cattgctgtg cgtaccggac
    11821 atcactgcgc tatgccatta atggcctatt acaacgtccc tgcgatgtgt cgggcgtcgc
    11881 tggccatgta taacactcat gaagaagtgg atcgtctggt gaccggcctg caacgtattc
    11941 accgtctgct gggataacag ggaggcacta tggctttatt gccggataaa gaaaaattgc
    12001 tgcgtaattt tttacgctgc gccaactggg aagagaaata tctctacatt attgagctgg
    12061 gccagcgtct gccagaatta cgcgacgaag accgaagccc acaaaatagc attcagggct
    12121 gccagaatca ggtgtggatt gtcatgcgcc agaatgcgca gggaattatt gaattgcagg
    12181 gcgacagcga tgcggcgatt gtgaaagggc ttattgcggt cgtatttatt ctctacgatc
    12241 agatgacgcc gcaggatatt gtcaatttcg atgtgcgtcc gtggtttgaa aaaatggcgc
    12301 tcacccaaca tctcacccca tctcgttcac aaggtctgga agcgatgatt cgcgcaattc
    12361 gcgccaaagc cgctgcactt agctaaacta aagggacagc tttcatccgg ttggctcaca
    12421 ttgccggatg gtcaatgttt acactgacct gcacaggagt gttttggttt caggtgaaca
    12481 taagcgccat ccgacgtttc agcgtgagtc tccggcaaat acaggaggtt tacaatgaaa
    12541 cgcgagtctt tgcttacact cacgcttatc ggcgctttta gcgccatcca ggctgcctgg
    12601 gcggttgatt atccgctacc accaaccgga agccgactgg ttgggcaaaa tcaaacgtat
    12661 acggtgcaag aaggggataa aaaccttcag gctattgccc gacgttttga tactgcggca
    12721 atgttgatcc ttgaagccaa tacactatcg ccccggtgcc aaaacctggt acgacgataa
    12781 ctattccttc acaactgtta ttacctgatg caccgcgtca ggggattatc gttaaccttg
    12841 cagagctgcg cctttattat tatccgccgg gagaaaatat cgtgcaggtt tatccgatag
    12901 gtattggctt gcaggggctg gaaacgccgg tgatggaaac gcgtgtgggg cagaaaatcc
    12961 ctaatccaac ctggacgcct acggcaggca ttcgtcaacg ttcgctggag cgtggcatta
    13021 aattactgcc agtcgttcct gccggaccaa ataacccgct aggacgttac gcactgcgct
    13081 tcgcgcatga taatggcgaa tacctcattc atggtaccag tgcgccggac agcgtcggtt
    13141 tgcgcgtcag ttcgggctgt attcgcatga atgcaccgga tattaaagcc ttattctcca
    13201 gcgtgcggac gggaacgccg gtgaaagtga tcaacgaacc ggtgaaatat tccgtggagc
    13261 ctaacgggat gcgttatgtt gaagtacatc gaccactatc ggcagaagaa cagcagaacg
    13321 ttcagacaat gccatacaca ctgccagcag gctttacgca atttaaagac aataaggctg
    13381 tagatcagaa gttagtcgat aaagcgttgt atcgtcgggc agggtatccg gtttcggtga
    13441 gcagtggagc aactcccgca gccagcaatg cgccttcagt agagtcagcg cagaatggtg
    13501 aaccagagca agggaatatg ttacgcgcga ggcagtagtg gtaaatagca gacaaaaaaa
    13561 atggcgcaca atgtgcgcca tttttcactt cacaggtact attacttgcg gtatttagta
    13621 gccatgttgt ccagacgctg gttagcacga gctgcgtcat ctttagcagc ctgaacgtcg
    13681 gaacgcattg cgttcacgtc gttgctcagc tggtcaactt tagcgttcag agtctgaacg
    13741 tcagaagaca gctgatcgat tttagcgttg ctggagcaac ctgccagcag agtagaaccc
    13801 aggattaccg cgcccagtac cagtttagta gctttcatta ttaataccct ctagattgag
    13861 ttaatctcca tgtagcgtta caagtattac acaaagtttt ttatgttgag aatatttttt
    13921 tgatgggaag gcacttattt ttgatcgttc gctcaaagaa gcatcgaacg ctgggtttta
    13981 gataaaaaaa ttgagagaaa acaggatgct tccatcggat tcatcttaga taaagtgaga
    14041 ttatatagtg aaatccgatt tgatttttta ttgcttctgg ttatcgatta aataaaaaaa
    14101 gcgcccatca gggcgcttcg atatacaaat taattcacaa aagcaatatt acaggacgtg
    14161 aacagatgcg gtgttagtag tgccgctcgg taccagtgca ccagaaacca taactacaac
    14221 gtcacctttg tgtgccagac cgctctgcag agccagttct ttacccagac ggtagaaatc
    14281 atcagtagaa gtgatctctt taaccagctg cggcacaacg cctttgctca gtaccaactg
    14341 atgagccgtt ttttcgttgg tggtcagtgc caggatggtg gcatccggga agtatttacg
    14401 tactgcgcga gcagatttac cgccctgagt agcaaccacg atcagcggag catccagttt
    14461 ttcagcagtt tcaacggcac cacggcatac cgcttcggta atgcgcagtt tacggttgtc
    14521 attgttgaac tcgagacggc tgttcatcac gcggtcggta cgttcgcaga tggtcgccat
    14581 gatagaaacc gcttccagcg ggtatttacc ttttgcggat tcaccagaca gcatcactgc
    14641 atcagtaccg tcgaggatgg cgtttgcaac gtcaccggct tctgcgcgag tcgggcgtgg
    14701 gtttttaatc atggaatcca gcatctgggt cgcagtgata acgactttac gtgcacggat
    14761 acatttttcg atcatcatct tctgggcgaa gataacttct tctaccggga tttctacacc
    14821 caggtcgcca cgcgcaacca tgatgccgtc agaggcttcg aggatttcgt cgaagttgtt
    14881 gaggccttcc tggttttcga ttttggagat gatgtggatg ttttcgccgc cgtgcgcttt
    14941 caggtgctca cggatttcga taacgtcaga acgcttacga ataaaggaag cagcaacaaa
    15001 gtctacgcct tgttcgcaac caaagatcag gtcctgtttg tctttttcag ccagtgctgg
    15061 cagagcaatg gaaacgccag gcaggttcac acctttgttt tcgcccaggt caccgttgtt
    15121 cagcacttta cagataactt tgttaccttc aatggcggta acttccatac cgatcagacc
    15181 atcgtcaacc agtacggtgt tgccaactga caggtcagta gtgaaacctt catacgttac
    15241 cgcaaccatt tcgctgttgc cgataacaga tttatcagtg gtgaaagtaa aggtctgacc
    15301 agctttcaga gaaacgtcgt taccgccttc cagtttcatg gtgcggattt ccggaccttt
    15361 ggtatcaagc aggatagcgg cggttttacc agttttgctc atcacgttgc gcagattctg
    15421 aatgcgctga ccgtgttctg catagtcacc atgagagaag ttcagacgca taacgttcat
    15481 gccagcgtcc agcattttag ctaacatctc ttcagattcg gttttcggtc cgatggtgca
    15541 aacaattttg gtctttttca tgacagtctt agtctttaag ttgagaagga tgggagaaac
    15601 ttgctttctg ggcgcactgc cggaaagcga atccggtatt acgaaagtgg tggtgcctcg
    15661 ctctaaggat aggtgacatc gaaaaagcgt gcagaggaat gtgtgcttgt gtctcagccc
    15721 aacgtgagtg cctgtttttg agtcgttgag ttctacagtc caaagtgctg aaaccattca
    15781 agagtcaatt ggcgcgcatt atacgctgaa attaatccaa aaggaaaaca aaaacagcgt
    15841 ttcaaaaaat atacaacttg ttagacaata aattgttatc aaagatttaa cgttccaggg
    15901 aaaaggttac gcaaaaactt cgctgtttgc gcaacgtctg gtgccaaagt tgtcagtgtg
    15961 aggataagtg aaagttcatc cggtgtataa atatatcatc gctcaattgc tacagttaaa
    16021 ataatttatc gcgttatttg tctgattttg tttgattttt gtttaattgg ttagattgat
    16081 atatgctgat agttggcatg ataaataggt ataaagaatg ggaaatcaga caaaagagga
    16141 tgaactgtac cgagaaatgt gcagagttgt cggtaaagtt gtgctggaaa tgcgcgatct
    16201 ggggcaggaa ccaaagcata ttgttatcgc aggcgtatta cgtacagcat tagccaataa
    16261 acgcattcag cgcagtgagc tggataagca ggcgatggaa accgtcatta acgcactggt
    16321 aaaatgacca ttcaggatga ggcggtaagc ttcat
//
LOCUS       DADMHC010000081        16199 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.081, whole genome shotgun sequence.
ACCESSION   DADMHC010000081 DADMHC010000000
VERSION     DADMHC010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16199)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16199)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16199
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.081"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..184)
                     /locus_tag="JNZ57_002171"
     CDS             complement(<1..184)
                     /locus_tag="JNZ57_002171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828385.1"
                     /translation="MKNIKLLGSAMLVSLALFSQNSLAKEYKIGASLLTQQHPFYIDL
                     ANAMKEEAKKDNVNLSV"
     gene            complement(220..1074)
                     /locus_tag="JNZ57_002172"
     CDS             complement(220..1074)
                     /locus_tag="JNZ57_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000275530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose bisphosphate family class II aldolase"
                     /protein_id="HAY8828386.1"
                     /translation="MYIISSKNMLKKAQSEGYAVPAFNIHNLETLQVVVESAAQLRSP
                     VMLAGTPGTYRYGGVGSLISLVQSLAREYNLPLVLHLDHHEESDDIFNKVRAGIRSVM
                     IDGSHLPFEDNIARVQEVTTFCHRFDVSVEVELGRLGGQEDDLLVDEKDSAYTSPAAA
                     AEFVQRTQIDSLAVAIGTAHGLYAHEPRLDFVRLEQIRQRVEIPLVLHGASGLSEQDV
                     QHCIRRGICKVNVATELKIAFADALKGYFYNNPAANDPRHYMQPAKAAMKEVVTRIIG
                     VCGSEGKI"
     gene            1416..2246
                     /locus_tag="JNZ57_002173"
     CDS             1416..2246
                     /locus_tag="JNZ57_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000843961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY8828387.1"
                     /translation="MKSVNVPRKSSNLLKRRLKIAEIVAAQGEIKVDDLSAQLGVSGV
                     TIRGDLSYLEQQGYLKRSFGGAIATPLSSEPEAIQPIAPLSLAQQMEIARHCARLIRD
                     RDTLFLGHGTICRKIIPLLSEVKKLRLITNDPEHALLANQFIDGEIILAGSEMLRPDT
                     ALAGKPLEQALQHFTITHSILEINHLDADGTLNINVPRLAAAWQLCFDHAQNKTVIVA
                     ADPAPSTAAIGHLHQAENVIVSRSINEQYQQQLQSADFVILYTSNECFTWSNRERLQE
                     "
     gene            2278..3213
                     /locus_tag="JNZ57_002174"
     CDS             2278..3213
                     /locus_tag="JNZ57_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001446002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY8828388.1"
                     /translation="MGELLAEFLSRNPHQKFTQPGEFIGPFPSGAPAIFAAQVAKLSH
                     RAIFFGCVGNDDFGRLIIERLRHEGVITDGIHVMNNAVTGTAFVSYQNPQQRDFVFNI
                     PNSACGLFTAEHIDKDLLKQCNHLHIVGSSLFSFRMIDVMRKAITTIKSAGGTVSFDP
                     NIRKEMLSIPEMAQALDYLIEYTDIFIPSESELPFFARHKNLSEEQIVSDLLHGGVKH
                     VAIKRAQRGASYYKLKNGTLHAQHVTGHDIEIIDPTGAGDCFGATFITLFLSGFPAHK
                     ALQYANASGALAVMRQGPMEGISSLADIEDFLQQH"
     gene            3306..3548
                     /locus_tag="JNZ57_002175"
     CDS             3306..3548
                     /locus_tag="JNZ57_002175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhdT family protein"
                     /protein_id="HAY8828389.1"
                     /translation="MDTRFVQAHKEARWALGLTLLYLAVWLAAAYLPDVAPGFTGFPR
                     WFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA"
     gene            3538..4989
                     /gene="panF"
                     /locus_tag="JNZ57_002176"
     CDS             3538..4989
                     /gene="panF"
                     /locus_tag="JNZ57_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312157.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/pantothenate symporter"
                     /protein_id="HAY8828390.1"
                     /translation="MQLEVILPLVAYLVVVFGISVYAMRKRSTGTFLNEYFLGSRSMG
                     GIVLAMTLTATYISASSFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILA
                     RRYNAVTLNDMLFARYQSRLLVWLASLSLLVAFVGAMTVQFIGGARLLETAAGIPYET
                     GLLIFGISIALYTAFGGFRASVLNDTMQGLVMLIGTVVLLIGVVHAAGGLSNAVETLQ
                     TIDPQLVTPQGADDILSPAFMTSFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIG
                     TIVVAILMFGMHLAGALGRAVIPDLTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMS
                     TINAQLLQSSATIIKDLYLNIRPDQMQNETRLKRMSAVITLVLGALLLLAAWKPPEMI
                     IWLNLLAFGGLEAVFLWPLVLGLYWERANAKGALSAMIVGGVLYAVLATLNIQYLGFH
                     PIVPSLLLSLLAFLVGNRFGTSVPQATVLTTDK"
     gene            5001..5882
                     /gene="prmA"
                     /locus_tag="JNZ57_002177"
     CDS             5001..5882
                     /gene="prmA"
                     /locus_tag="JNZ57_002177"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HAY8828391.1"
                     /translation="MPWIQLKLNTTGANAEDLSDALMEAGAVSITFQDTHDTPVFEPL
                     PGETRLWGDTDVIGLFDAETDMNDVVAILENHPLLGAGFAHKIEQLEDKDWEREWMDN
                     FHPMRFGERLWICPSWRDVPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGK
                     TVIDFGCGSGILAIAALKLGAAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQ
                     PEEMKADVVVANILAGPLRELAPLISVLPVSGGLLGLSGILASQAESVCEAYADSFAL
                     DPVVEKEEWCRITGRKN"
     gene            6211..7176
                     /gene="dusB"
                     /locus_tag="JNZ57_002178"
     CDS             6211..7176
                     /gene="dusB"
                     /locus_tag="JNZ57_002178"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008785970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HAY8828392.1"
                     /translation="MRIGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSS
                     NPQVWESDKSRLRMVHIDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPA
                     KKVNRKLAGSALLQYPDVVKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAED
                     CGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGA
                     DALMIGRAAQGRPWIFREIQHYLDTGELLPPLPLAEVKRLLCAHVRELHDFYGPAKGY
                     RIARKHVSWYLQEHAPNDQFRRTFNAIEDASEQLEALEAYFENFA"
     gene            7202..7498
                     /gene="fis"
                     /locus_tag="JNZ57_002179"
     CDS             7202..7498
                     /gene="fis"
                     /locus_tag="JNZ57_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001465625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator Fis"
                     /protein_id="HAY8828393.1"
                     /translation="MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNG
                     QDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN"
     gene            7584..8468
                     /gene="yhdJ"
                     /locus_tag="JNZ57_002180"
     CDS             7584..8468
                     /gene="yhdJ"
                     /locus_tag="JNZ57_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417728.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine-specific DNA-methyltransferase"
                     /protein_id="HAY8828394.1"
                     /translation="MRTGCEPTRFGNEAKTIIHGDALAELKKIPAESVDLIFADPPYN
                     IGKNFDGLIEAWKEDLFIDWLFEVIAECHRVLKKQGSMYIMNSTENMPFIDLQCRKLF
                     TIKSRIVWSYDSSGVQAKKHYGSMYDPILMMVKDAKNYTFNGDAILVEAKTGSQRALI
                     DYRKNPPQPYNHQKVPGNVWDFPRVRYLMDEYENHPTQKPEALLKRIILASSNPGDIV
                     LDPFAGSFTTGAVAVSSGRKFIGIEINSEYIKMGLRRLDVASHYSAEELAKVKKRKTG
                     NLSKRSRLSEVDPDLIAK"
     gene            8552..8731
                     /locus_tag="JNZ57_002181"
     CDS             8552..8731
                     /locus_tag="JNZ57_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2556 domain-containing protein"
                     /protein_id="HAY8828395.1"
                     /translation="MIRKYWWLVVFAVFVFLFDTLLMQWIELLTTETDKCRNMNSVNP
                     LKLVNCDELNFQDRM"
     gene            complement(8734..9396)
                     /gene="acrS"
                     /locus_tag="JNZ57_002182"
     CDS             complement(8734..9396)
                     /gene="acrS"
                     /locus_tag="JNZ57_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter transcriptional
                     repressor AcrS"
                     /protein_id="HAY8828396.1"
                     /translation="MAKRTKAEALKTRQELIETAIAQFAQHGVSKTTLNDIADAANVT
                     RGAIYWHFENKTQLFNEMWLQQPSLRELIQEHLTAGLEHDPFQQLREKLIVGLQYIAK
                     IPRQQALLKILYHKCEFNDEMLAEGVIREKMGFNPQTLREVLQACQQQGCVANNLDLD
                     VVMIIINGAFSGIVQNWLMNMAGYDLYKQAPALVDNVLRMFMPDENITKLIHQTNELS
                     VM"
     gene            9795..10952
                     /gene="acrE"
                     /locus_tag="JNZ57_002183"
     CDS             9795..10952
                     /gene="acrE"
                     /locus_tag="JNZ57_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit AcrE"
                     /protein_id="HAY8828397.1"
                     /translation="MTKHARFFLLPSFILISAALIAGCNDKGEEKAHVGEPQVTVHIV
                     KTAPLEVKTELPGRTNAYRIAEVRPQVSGIVLNRNFTEGSDVQAGQSLYQIDPATYQA
                     NYDSAKGELAKSEAAAAIAHLTVKRYVPLVGTKYISQQEYDQAIADARQADAAVIAAK
                     ATVESARINLAYTKVTAPISGRIGKSTVTEGALVTNGQTTELATVQQLDPIYVDVTQS
                     SNDFMRLKQSVEQGNLHKENATSNVELVMENGQTYPLKGTLQFSDVTVDESTGSITLR
                     AVFPNPQHTLLPGMYVRARIDEGVQPDAILIPQQGVSRTPRGDATVLIVNDKSQVEAR
                     PVVASQAIGDKWLISEGLKSGDQVIVSGLQKARPGEQVKATTDTPADTASK"
     gene            10964..14061
                     /gene="acrF"
                     /locus_tag="JNZ57_002184"
                     /pseudo
     CDS             10964..14061
                     /gene="acrF"
                     /locus_tag="JNZ57_002184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417732.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit AcrF"
     gene            14314..14535
                     /locus_tag="JNZ57_002185"
     CDS             14314..14535
                     /locus_tag="JNZ57_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828398.1"
                     /translation="MKRLIPVALLTALLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTT
                     QDNWETAGAIAGGAAAVAGLTMGIIALSK"
     gene            14966..15991
                     /locus_tag="JNZ57_002186"
     CDS             14966..15991
                     /locus_tag="JNZ57_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312168.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8828399.1"
                     /translation="MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDG
                     LPGFSYADADGKFSGIDVDVCRSVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLS
                     RNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELN
                     VADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL
                     PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH
                     LLGKEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGI
                     QYAPPVR"
     gene            16059..>16199
                     /locus_tag="JNZ57_002187"
     CDS             16059..>16199
                     /locus_tag="JNZ57_002187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312169.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY8828400.1"
                     /translation="MSHRRSTVKGSLSFANPTVRAWLFQILAVVAVVGIVGWLFHNTV
                     TNL"
BASE COUNT         4068 a         3861 c         4018 g         4252 t
ORIGIN      
        1 agacacttaa attgacattg tctttttttg cctcttcttt catggcattc gcaagatcaa
       61 tatagaaagg atgttgctgt gttaataatg acgcaccaat tttatactct tttgccaacg
      121 aattttgcga gaacaatgcc aggctcacca acatagctga accaagtaat ttaatatttt
      181 tcataaacaa tcctcattgt ttttgtaggg tacaacgtct taaatttttc cttcactacc
      241 acagacacca ataatacgag ttacgacttc tttcatggcg gcctttgcgg gctgcatata
      301 gtggcgtgga tcatttgccg caggattgtt gtagaaatat ccttttaacg catcggcaaa
      361 cgcaattttc aattctgtcg cgacattcac tttacaaata ccgcggcgaa tacagtgctg
      421 aacgtcctgt tctgataagc ccgaagcacc atgcaacacc agtggaatct ccactcgctg
      481 acgaatctgt tccagccgca caaaatccag tcgtggttca tgcgcatata aaccatgtgc
      541 tgtgccgatt gctacggcca gggagtcaat ttgggtacgt tgaacaaact ctgcagctgc
      601 ggctggtgag gtataagcgg aatctttttc atccaccagc agatcgtcct cctggccgcc
      661 aagacgccct agctcgacct caacgctaac atcaaagcga tggcaaaagg tggtaacttc
      721 ttgcactcgc gcaatgttgt cttcaaatgg caaatgggag ccatcaatca tgacagaacg
      781 gatccctgcg cgaaccttgt taaaaatgtc atcactctct tcatgatggt cgagatgcag
      841 gactaacggc aggttgtact cgcgagccag cgattgtact aacgaaatta aacttcccac
      901 gccaccataa cgataagtac cgggtgttcc cgccagcata acgggagagc gaagttgtgc
      961 agcgctctca acaactacct gtaaagtttc aaggttatga atgttgaaag cggggacggc
     1021 atatccctct gactgggctt ttttcagcat gtttttgctt gaaatgatgt acatcgcagc
     1081 tcctgttatt tgtcgttcgc cttacaaaat gaagaaagag aatattcact ttcattttga
     1141 aagcaaacta gcacagcaaa agcggcaaaa agcgtgatgc atgtcgaata tcatcaaaat
     1201 aacttacaaa aaataactta atttgttttt cactttacaa gtgaaaccaa taacatctct
     1261 gcataaatat gaataaattc atttattttt caatgaatta atctattttt gttgcgattt
     1321 ttgacccatg attttctttt cgaattgtcg atattattga aggataactt tcaaagaaaa
     1381 atacaagggg ctatagtgtt acgcattaaa ggccaatgaa gagtgttaac gtgccgagaa
     1441 aatcgtctaa cctactgaaa cgcagattaa aaattgcaga aattgttgcc gcccaaggtg
     1501 aaatcaaagt tgatgactta tctgcgcaac ttggtgtctc tggcgtgacg atccgcggcg
     1561 atctcagtta tctggagcaa cagggatatt taaagcgatc atttggcggt gctattgcga
     1621 caccactctc ctctgaacca gaagcgatac aaccgatcgc gccattgtct ctggcacaac
     1681 aaatggaaat agcacgacat tgcgcacggt taattcgcga tcgtgacacg ctatttcttg
     1741 gacatgggac aatctgccgt aagatcattc cattgctcag cgaagtgaaa aaactgcgtc
     1801 tgatcaccaa cgatcccgaa catgcgctgc tggcaaatca gtttattgat ggcgaaataa
     1861 tactggctgg cagtgaaatg ctgcgccccg acaccgcact ggccggaaaa ccgcttgaac
     1921 aggcacttca gcatttcacc attacacata gcattctgga aatcaaccat ctggatgctg
     1981 atggtacttt aaatatcaac gttcccagac tggccgctgc ctggcagctc tgtttcgatc
     2041 atgcccagaa taagacggtt atcgttgccg ccgatcctgc gccatcaacg gctgctatcg
     2101 ggcatttgca tcaggcagaa aatgtgatcg tcagccgcag cattaacgaa caatatcagc
     2161 aacaattgca gtcggctgat ttcgttatcc tttataccag taatgagtgc tttacctggt
     2221 ccaatcgcga aaggcttcag gaatgagagg ggttttgtga caataactat ctgcgctatg
     2281 ggcgaattgc tggccgagtt tttgtcccgc aacccacatc aaaaattcac tcagcctggg
     2341 gagtttatcg ggccatttcc cagcggtgcg ccagcaattt ttgctgctca ggtggcaaaa
     2401 ctgtcccatc gggccatctt cttcggatgt gttggtaatg atgattttgg ccgactcatt
     2461 atagagcgcc tccgtcatga aggtgtcatt accgatggga tccatgttat gaacaatgcc
     2521 gtcacaggta cggcgttcgt gagttatcaa aatccccagc agcgcgattt cgtctttaat
     2581 atccctaaca gcgcctgcgg cttgtttact gctgagcaca ttgataagga tctgctaaaa
     2641 cagtgtaacc atctccatat tgtgggctca tcgttgttct catttcgcat gatcgatgtc
     2701 atgcgtaaag caataacgac gatcaaatcg gctggcggca ccgtttcttt cgatcccaat
     2761 attcgcaaag agatgctgag cattcctgaa atggcgcagg ctctcgatta tttgattgaa
     2821 tatacggata ttttcatccc cagcgaaagc gaactccctt tcttcgcgcg tcacaaaaat
     2881 ctgtcagaag aacagattgt tagcgatctt ctccacggcg gcgtaaaaca tgtggcgata
     2941 aaacgcgccc agcgtggggc cagctattac aagcttaaaa acggtacatt acacgcccag
     3001 catgttacag gccacgatat cgaaattatc gatccaacgg gtgcaggcga ctgctttggc
     3061 gcaacgttta tcactctttt cttatccggt ttcccggcac ataaggcact gcaatatgca
     3121 aatgccagcg gcgcgctcgc cgtaatgcgg caaggtccga tggaagggat atcctcactg
     3181 gctgacattg aagacttttt gcagcagcac tgaacggcaa ttttctgtca gattattttc
     3241 cctgcctgaa gagttgccgt agaattgccc gtttctcgta tccccccatg aggaggaacc
     3301 cttccgtgga cactcgtttt gttcaggccc ataaagaggc gcgctgggcg ctggggctga
     3361 cccttttgta tctggcagtt tggttagcag ccgcttactt acctgacgtt gcccccggtt
     3421 ttaccggctt tccgcgctgg tttgagatgg cctgcatcct gacgccgctg ctgtttattg
     3481 gactgtgctg ggcgatggtg aaatttatct atcgcgatat cccactggag gatgacgatg
     3541 cagcttgaag tgattctacc gctggtcgcc tatctggtgg tggtgttcgg tatctctgtt
     3601 tatgcgatgc gtaaacggag caccggtacc ttccttaatg agtatttcct cggcagccgc
     3661 tctatgggcg gtattgtgct ggcgatgacg ctcaccgcga cctatatcag tgcaagttcg
     3721 tttatcggcg ggcctggagc tgcttataaa tacggcctgg gttgggtatt gctggcgatg
     3781 attcagcttc ctgcagtctg gctttcgctc ggtattctcg gcaagaagtt cgcgattctt
     3841 gcgcgccgct acaatgcagt gacgctgaac gacatgctgt ttgcccgcta ccagagtcgt
     3901 cttctggtgt ggctggcgag tttgagtttg ctggttgcgt tcgttggggc aatgaccgtg
     3961 cagtttatcg gcggtgcgcg cctgctggaa accgcggcgg gtattcctta tgaaaccggg
     4021 ctgctgattt tcggtatcag cattgcgttg tataccgcct ttggcggctt tcgcgccagc
     4081 gtgctgaacg acaccatgca agggcttgtg atgctgattg gcaccgttgt gctgcttatt
     4141 ggcgtggtac atgccgcagg tggtttaagt aatgcggtag agacgctgca aaccatcgat
     4201 ccgcaactgg ttacgccaca aggcgctgac gatattctgt cgcctgcctt tatgacgtcg
     4261 ttctgggtac tggtgtgctt tggcgtgatt ggcctgccgc atactgcggt gcgctgtatc
     4321 tcttataaag acagcaaagc ggtacaccgg gggatcatca tcggtacgat tgtagtcgca
     4381 atcctgatgt tcggtatgca cctggccgga gcgttaggtc gtgcagtgat ccccgatctc
     4441 accgtaccgg atctggtgat cccgacgtta atggtaaaag tgctgccacc gtttgctgcc
     4501 gggatctttc tggctgcacc tatggctgcg atcatgtcga caattaacgc ccaattgcta
     4561 caaagttccg ctacgatcat taaagatctc tatctgaata tccgtccgga tcaaatgcaa
     4621 aacgagacgc gtctgaagcg gatgtcggcg gtaattacgt tagttctcgg cgcgttgctg
     4681 ctgcttgccg cctggaagcc gccagaaatg atcatctggc tgaatttgct ggccttcggt
     4741 gggttggaag ccgttttcct gtggccgctg gtgctgggtc tttactggga acgcgccaac
     4801 gccaaaggcg cgctaagtgc gatgatcgtt ggcggcgtgc tgtatgccgt actcgcgacg
     4861 ctgaatattc agtacctggg cttccaccct atcgtgccct cgttactact aagtttgctg
     4921 gctttcctgg tcggaaaccg tttcggtaca tccgtcccgc aagctaccgt tttgactact
     4981 gataaataaa gagttttgcc atgccttgga tccaactgaa actgaacacc accggcgcga
     5041 acgctgaaga tcttagcgat gcgctgatgg aagcgggtgc cgtttctatc acttttcagg
     5101 atacccacga tacgccagta tttgagccgc tgccgggcga aacgcgcctg tggggcgaca
     5161 ccgatgtgat tggtctgttc gacgctgaaa ccgatatgaa cgacgtggtg gcgattctgg
     5221 aaaaccatcc gctgctcggc gcaggcttcg cgcataaaat cgaacaactg gaagataaag
     5281 actgggagcg cgaatggatg gataatttcc acccgatgcg ctttggtgaa cgactgtgga
     5341 tctgcccaag ctggcgtgat gtgccggacg aaaacgccgt caacgtgatg ttagacccag
     5401 ggctggcgtt tggtacgggt acccatccaa ctacctctct gtgcctacaa tggctcgaca
     5461 gcctcgattt aactggtaaa acagtcatcg actttggctg cggttccggc attctggcta
     5521 tcgcggcgct gaaactgggt gcagcaaaag ccattggtat tgatatcgat ccgcaggcga
     5581 ttcaggctag ccgcgacaac gccgaacgta atggcgtttc tgaccgtctg gaactctact
     5641 taccgaaaga tcagccagaa gaaatgaaag ccgacgtggt ggtcgcgaac atccttgcag
     5701 gcccattacg tgaactggca ccgttaatca gcgtcctgcc ggtttcaggc ggtttgctgg
     5761 gcctttccgg tattctggca agccaggcag agagcgtttg tgaagcttat gccgatagct
     5821 tcgcactgga cccggtcgtg gaaaaagaag agtggtgccg tattaccggt cgtaagaatt
     5881 aaccttcgca tcgccgtagg gtgacgcggg gcgaagtgcg agcaagctca caaaaggcac
     5941 gtaaatttgc cggttattta cgcaaatttg cgtgccaaaa ttttcattca taaagaaaaa
     6001 ttgagaactt actcaaattt ctttgaatgt aaattttagt cactattttc taatatgatg
     6061 atttttatga gtaattatcg caccacgctc attttaaatg caattctttg atccatctca
     6121 gaggattggt caaagtttgg cctttcatct cgtgcaaaaa atgcgtaata tacgccgcct
     6181 tgcagtcaca gtatggtcat ttcttaactc atgcgcatcg gacaatatca gctcagaaat
     6241 cgcctgatcg cagcgcccat ggctggcatt acagacagac cttttcggac gttgtgctac
     6301 gagatgggag ccggattgac agtatccgag atgatgtctt ctaacccaca ggtttgggaa
     6361 agcgacaaat ctcgtttacg gatggtgcac attgatgaac ccggtattcg caccgtgcaa
     6421 attgctggta gcgatccgaa agaaatggca gatgcagcac gtattaacgt ggaaagcggt
     6481 gcccagatta ttgatatcaa tatgggttgc ccggctaaaa aagtgaatcg caagctcgca
     6541 ggttcagccc tcttgcagta cccggatgtc gttaaatcga tccttaccga ggtcgtcaat
     6601 gcagtggacg ttcctgttac cctgaagatt cgcactggct gggcaccgga acaccgtaac
     6661 tgcgaagaga ttgcccaact ggctgaagac tgtggcattc aggctctgac cattcatggc
     6721 cgtacacgcg cctgtttgtt caatggagaa gctgagtacg acagtattcg ggcagttaag
     6781 cagaaagttt ccattccggt tatcgcgaat ggcgacatta ctgacccgct taaagccaga
     6841 gctgtgctcg actatacagg ggcggatgcc ctgatgatag gccgcgcagc tcagggaaga
     6901 ccctggatct ttcgggaaat ccagcattat ctggacactg gggagttgct gcccccactg
     6961 cctttggcag aggttaagcg cttgctttgc gcgcacgttc gggaactgca tgacttttat
     7021 ggtccggcaa aagggtaccg aattgcacgt aaacacgttt cctggtatct ccaggaacac
     7081 gctccaaatg accagtttcg gcgcacattc aacgccattg aggatgctag cgaacagctg
     7141 gaggcgttgg aggcatactt cgaaaatttt gcgtaaacag aaataaagag ctgacagaac
     7201 tatgttcgaa caacgcgtaa attctgacgt actgaccgtt tctaccgtta actctcagga
     7261 tcaggtaacc caaaaacccc tgcgtgactc ggttaaacag gcactgaaga actattttgc
     7321 tcaactgaat ggtcaggatg tgaatgacct ctatgagctg gtactggctg aagtagaaca
     7381 gcccctgttg gacatggtga tgcaatacac ccgtggtaac cagacccgtg ctgcgctgat
     7441 gatgggcatc aaccgtggta cgctgcgtaa aaaattgaaa aaatacggca tgaactaatt
     7501 caggttagct aaatgcttga ttaaaaaggc gctactcggc atggggaagc gcctttttta
     7561 taggtgtcac aaagggagtg accatgagaa caggatgtga accgacccgg tttggtaatg
     7621 aagctaagac cattattcac ggtgatgcgc ttgccgaact taaaaagatc cccgccgaaa
     7681 gtgtcgatct gatctttgcc gacccaccat ataacatcgg taaaaatttt gatggtctga
     7741 tcgaagcctg gaaagaagat ctgtttatcg actggctgtt tgaagtgatt gcagagtgcc
     7801 accgcgttct gaaaaagcag ggcagcatgt acatcatgaa cagcacggaa aacatgccct
     7861 ttatcgatct ccagtgccgc aagcttttta ccatcaaaag tcgcatcgtc tggtcatatg
     7921 acagttctgg agtacaggcg aaaaaacact acggctccat gtacgacccc atcctgatga
     7981 tggtgaaaga cgcaaagaac tacacattca acggtgatgc tattctggta gaagccaaaa
     8041 ccggatcgca gcgcgcgttg atcgattatc gcaaaaatcc tccacagcca tacaatcatc
     8101 aaaaagtacc gggtaacgtc tgggattttc cgcgcgtgcg ttatttgatg gatgaatatg
     8161 agaaccaccc gacgcaaaaa ccggaagcct tactgaaacg cattattctc gcctcttcca
     8221 acccaggcga tatcgttctc gacccgtttg ccggtagctt tactaccggt gccgtagccg
     8281 tctccagcgg gcgaaaattc attggtattg agatcaacag cgagtacatc aaaatggggc
     8341 ttcgacggct ggatgtcgcg tcgcattact ctgcggaaga actggcgaaa gtgaaaaaaa
     8401 gaaagaccgg caacctgtca aaacgaagcc ggttaagcga agttgacccc gatctcattg
     8461 caaagtaaag gaagtgtaag cctggttttc agattattca tttcgtgtat atttcctgcc
     8521 agacttggtt aaacatgcac aggctcaggt aatgattcgc aagtattggt ggctcgtcgt
     8581 tttcgctgtc ttcgtttttc tgtttgatac tttactgatg cagtggattg aactgctgac
     8641 aacagaaaca gacaaatgcc gtaatatgaa ctcagttaat ccactaaaac tggttaactg
     8701 tgacgaactg aattttcagg acagaatgtg aatttacatg acacttaatt cattcgtttg
     8761 atgaattaat ttcgttatgt tttcatctgg catgaacatt cttaatacgt tatcgaccag
     8821 cgcgggtgct tgtttataaa gatcataacc cgccatattc attaaccagt tttgaacaat
     8881 tccgctgaag gcaccattaa taataatcat cacaacatct aaatcgaggt tatttgctac
     8941 acaaccttgt tgctgacacg cctgcaatac ttcgcggaga gtctgcggat taaagcccat
     9001 cttttcgcgt atcactccct cggccagcat ctcatcatta aattcacatt tgtgatataa
     9061 gattttcagc aacgcctgct ggcggggaat tttggcaata tattgcaagc cgacaatcaa
     9121 tttttcacgc aattgttgaa acgggtcatg ctctaatcca gccgtcaagt gttcctggat
     9181 taactcccgc aatgaaggct gttgcaacca catctcatta aacagttgag tcttgttttc
     9241 gaagtgccag tagatagcgc cacgcgtaac gttagcggcg tcggcaatgt cgttgagcgt
     9301 cgtcttgctt acgccatgct gcgcaaactg ggcgatggca gtttcaatca gttcttgccg
     9361 ggtcttcaga gcttcggctt tggttctttt tgccatgatt aattattcag gaaataaata
     9421 tattcgacac agggtgagaa aatagcgaag gttaatctat catctaatgt gtatttatac
     9481 gagagggtaa cattgagttg ctataaatcg tcaaataaac aatgtatatt atttacctaa
     9541 aatacattcg ccacatgaat atatatttca atttacgagg ttttaattct gcctctttca
     9601 acccgcgtca aaataaaaca gtagaatatt aatctttttt tgtgtttatg tgccttgaga
     9661 cgccagtatt cataactatt ccttacatcg acgaatgata atttgtagga tagcaaactg
     9721 tatttttctt tctgcgagtt aacgcgttgc ctttctgggt aaataacgcg cttttggttt
     9781 tttgaggaat agtaatgacg aaacatgcca ggtttttcct cctgccctcc tttattctga
     9841 tctccgcggc tttaatcgcc ggttgtaacg ataagggaga agagaaagct cacgtcggtg
     9901 aaccgcaggt taccgttcat attgtgaaaa cggccccgtt agaagttaag actgaattac
     9961 caggccgcac caatgcttac cgtatagccg aagttcgccc acaggttagc gggatcgtac
    10021 tgaatcgtaa tttcactgaa ggcagcgatg tacaagcagg ccagtccctg taccagatcg
    10081 atcccgcgac ctatcaggca aattatgaca gcgcgaaagg cgaactggcg aaaagtgaag
    10141 ccgccgccgc catcgcgcat ttgacggtaa aacgttacgt tccgctcgtg ggtacgaaat
    10201 acatcagcca gcaggagtac gaccaggcca ttgctgatgc tcgccaggcc gatgccgccg
    10261 tgattgccgc aaaagccaca gtcgaaagcg ctcgcatcaa tctcgcttat accaaagtga
    10321 ctgcgccaat tagcggacgt atcggcaaat cgaccgtgac cgaaggcgct cttgtcacta
    10381 atgggcaaac gactgaactg gcgactgtcc agcagctcga tcctatctac gttgatgtga
    10441 cccaatccag caacgatttt atgaggctga agcaatccgt agagcaagga aatttgcata
    10501 aggaaaacgc caccagcaac gtagagttgg tcatggaaaa cggtcaaacc tatcccctga
    10561 aaggtacgct gcaattctct gatgtgaccg ttgatgaaag caccggctcc ataaccctac
    10621 gtgctgtctt ccctaacccg caacatacgc ttttgccggg tatgtatgtg cgtgcacgga
    10681 ttgatgaagg cgtccaacct gacgccattc ttatcccgca acaaggcgtt agccgcacac
    10741 cgcgtggtga tgcaaccgtg ctgattgtta acgataaaag tcaggtggaa gcgcgccctg
    10801 tcgttgccag tcaggcgatt ggcgataaat ggttgattag cgaaggtctg aaatctggcg
    10861 atcaagtcat tgtcagcggc ctgcaaaaag cgcgtccggg agagcaggtt aaagccacta
    10921 ccgatacccc cgcagatact gcatcgaagt aaggtaatct gacatggcaa acttttttat
    10981 tcgacgaccg atatttgcat gggtgctggc cattattctg atgatggcgg gcgcactggc
    11041 gatcctacaa ttgcccgtcg ctcagtatcc aaccattgca ccgcctgcgg tttctgtttc
    11101 ggcaaactat ccaggtgctg atgcgcagac cgtgcaggat acggtgacgc aggttatcga
    11161 acagaatatg aatggtatcg ataacctgat gtatatgtcc tccaccagcg attccgccgg
    11221 tagcgtgaca attactctta ccttccagtc cgggaccgat cctgatatcg cgcaagtgca
    11281 ggtgcagaac aaactccagc tcgccacgcc gttgctgccg caggaggttc agcagcaggg
    11341 gatcagtgtt gaaaagtcca gtagcagcta tttgatggtg gcgggttttg tctctgataa
    11401 cccaggcacc acacaggacg atatctcgga ctatgtggcc tctaacgtta aagatacgct
    11461 tagccgtctg aatggcgtcg gtgacgtaca gcttttcggc gcacagtatg cgatgcgtat
    11521 ctggctggac gccgatctgc taaacaaata taaactgaca ccggttgatg tgattaacca
    11581 gttgaaggta cagaacgatc agatcgctgc cggacagttg ggcggaacgc cagcgttacc
    11641 agggcaacag ttgaatgcct cgattattgc tcaaacgcgg ttaaaaaatc cggaagaatt
    11701 cggcaaattg accctgcgcg taaacagtga cggctcggtg gtacgcctga aagatgtcgc
    11761 acgggttgaa cttggcggtg aaaactataa cgttatcgct cgtatcaacg gaaaaccggc
    11821 ggcgggcctg gggattaagc tggcaaccgg cgcgaatgct ctcgataccg cgaaagccat
    11881 taaggcaaaa ctggcggaat tacagccatt cttcccgcag ggaatgaagg ttctctaccc
    11941 ttatgacacc acgccattcg tccagctttc tattcacgaa gtggtaaaaa cgctgttcga
    12001 agccattatg ctggtgttcc tggtgatgta tctgttcttg cagaatatgc gagcaacgct
    12061 gatccccacc attgcggtac ccgtggtgtt gttagggacg tttgccatcc tcgccgcttt
    12121 tggttactcc atcaacacac taacgatgtt cgggatggtg cttgccatcg ggctgctcgt
    12181 cgatgatgcg atagtggtgg tggagaacgt cgagcgcgtg atgatggagg ataagctccc
    12241 gccaaaagaa gcgacggaaa aatcgatgtc gcaaattcag ggcgcactgg tgggtatcgc
    12301 gatggtgctg tcagcggtat ttattccgat ggcattcttc ggcggttcta ctggggcaat
    12361 ttatcgccag ttctctatca ccatcgtttc ggcaatggca ctttctgttc tggtggcatt
    12421 gattcttacc cctgcgttat gtgcaacgct gcttaaaccc gtctctgctg agcatcacga
    12481 aaataagggc ggtttcttcg gctggtttaa taccaccttc gatcatagcg ttaaccacta
    12541 caccaacagc gtcggcaaaa tcctcggttc cacaggacga tatttactga tctatgcgct
    12601 gattgttgca ggaatggtgg tgttgttttt acgtcttcct tcttacctga agaggatcag
    12661 ggtgtctttc tgaccatgat tcagttaccc gctggcgcga cgcaagagcg gacgcaaaaa
    12721 gtgttggatc aagtgacgga ttactatctg aagaacgaga aagcgaacgt tgaaagtgtc
    12781 tttacggtta acggctttag cttcagcggc taggcacaaa acgccggtat ggccttcgtc
    12841 agtctgaaac cgtgggaaga gcgtaatggt gatgaaaaca gtgcggaagc ggtaatccat
    12901 cgtgccaaaa tggaattggg caagatccgc gacggttttg tcattccatt caatatgcca
    12961 gccattgttg aactgggcac ggcaacgggt ttcgactttg agttaattga tcaggctggg
    13021 ctgggtcacg atgccctaac ccaggcccgt aaccagttgc ttggtatggc ggcgcaacat
    13081 cctgccagct tagtcagcgt gcgtcctaat ggcctggaag acaccgcgca gtttaaactg
    13141 gaagttgacc aggaaaaggc gcaggcatta agtgtttcac tttctgacat caatcagacc
    13201 atttcaacgg cgttgggtgg gacttacgtt aacgacttca tcgaccgtgg tcgcgtgaaa
    13261 aaggtgtatg ttcaggcgga tgccaaattc cgtatgctgc cagaagatgt cgataaactt
    13321 tatgtccgca gcgccaacgg cgaaatggtg ccattctcgg cctttaccac ttcacattgg
    13381 gtgtatggct ctccgcgact ggaacactac aacggtctgc cgtcaatgga gattcagggg
    13441 gaagccgcgc caggaaccag ttccggcgat gccatggcgt tgatggaaaa ccttgcgtca
    13501 aaattacctg cgggcattgg ttatgactgg acgggtatgt cgtatcagga acgcttatcg
    13561 ggaaaccagg ctcccgctct ggtagcaatt tcctttgtgg ttgttttcct gtgccttgct
    13621 gcactctatg aaagctggtc aattcctgtc tcggttatgt tggtcgtgcc gttagggatt
    13681 gtcggcgtgc tgctggcggc gacactcttt aatcaaaaaa atgacgtcta ctttatggtg
    13741 ggcttgctaa cgacaattgg cttgtcggcc aaaaacgcta ttttgattgt tgagttcgct
    13801 aaagatctca tggagaaaga gggtaaaggt gttgttgaag cgacactaat ggcagtacgt
    13861 atgcgtctgc gtcctatcct gatgacctct ctcgccttta ttctcggcgt attaccgcta
    13921 gctatcagta acggtgcagg cagtggcgcg cagaacgcag tgggtatcgg ggtaatgggc
    13981 ggaatggtct ctgcaacgtt gctggcaatc ttcttcgtac cggtgttctt tgtggtgatc
    14041 cgccgttgct ttaaaggata aatcagaaac ataaaggcac tttcggatgc ctttattatt
    14101 ttcagtgaaa cccataaaaa ttaataagat attcttccac tcactcttta aaaactttct
    14161 atagttcccg ctcccttcac tatttttaca attcacataa tttgtcatta ttcattccgc
    14221 aatatttata acctccggtg ataaaatggc attcagctcg ttaataagag agttaactta
    14281 ttaagcgtta gcgtttatta ctgaggtaac accatgaaaa gattaattcc tgtggcattg
    14341 ctcaccgcat tgctggcggg ctgtgctcac gattcgccct gcgttccggt ttatgacgat
    14401 cagggtcgtc tggttcacac caatacctgt atgaaaggca cgactcagga taactgggaa
    14461 acggctgggg ctattgccgg cggggcagcg gctgttgctg gcctgacgat ggggatcatc
    14521 gctctgtcga aataactgaa cagggcgcgg agtttcgcgc tctgtttaac gatacagtat
    14581 ctttacataa gataaaatat tgctatattc tgctggctaa ttctctgctg atttagcatg
    14641 ttatatcgcg ttatttcgct gctttcgaaa taacgcatca atttaacttt cacacttccc
    14701 accagaaata tactcacgct aacaatcatt attctgctta gtaaaacacg cgtaaatatt
    14761 ctgcgccaaa atgtggcgca tgtttcattt tcgcaccatt gcggggcgct gtttttatta
    14821 tttactgtct acactcagct tattgcgacg cgaaatcgtg cgcaaaagct ggcactactt
    14881 ttgcttataa gaggatggcc acagacaggt aaaagacgtt tcccaaacgt cctataacga
    14941 taattttcgc ctcacaggaa gcattatgaa aaagatgatg atagccacac tggctgccgc
    15001 cagcgtgctg cttgccgttg caaatcaggc gcatgctggc gcgacgcttg atgccgttca
    15061 gaaaaaaggt tttgtgcaat gcgggatcag tgatggatta cctgggttct cttatgccga
    15121 tgcagacggt aagttttcag gtattgatgt tgatgtttgt cgtagtgttg ccgctgctgt
    15181 atttggtgac gacacgaaag tgaaatatac cccactcaca gcaaaagaac gcttcacggc
    15241 tttacagtca ggggaagtgg atttgctctc ccgtaatacg acctggactt catctcgcga
    15301 cgccgggatg ggaatggcat ttactggcgt cacttattac gacggcattg gcttcctgac
    15361 gcacgataaa gcggggctaa aaagcgcgaa agaactggat ggcgctaccg tctgtattca
    15421 ggcgggtact gataccgaac tcaacgttgc cgactatttc aaggcaaaca atatgaagta
    15481 cacaccggtg actttcgatc gctctgacga atcagcgaag gcactggaat ctggtcgctg
    15541 cgatacgctg gcctcggatc agtcgcaact gtatgccctg cgcatcaaat taagcaaccc
    15601 agctgaatgg attgtcttac cggaggttat ctctaaagaa ccgcttgggc cggtagttcg
    15661 tcgtggcgat gatgaatggt tctcgattgt acgctggacg cttttcgcca tgctgaatgc
    15721 tgaagagatg ggcatcaatt cccagaacgt cgatgaaaaa gcggctaatc cagcaacgcc
    15781 tgatatggca catctgctgg gtaaagaagg cgattacggc aaggatctga agttggataa
    15841 taaatgggcc tataacatca tcaaacaggt gggtaactac tcggaaattt tcgagcgtaa
    15901 cgtaggttca gaaagcccgc tgaaaattaa acgtgggcaa aataatctct ggaataacgg
    15961 cggtattcag tacgcgccgc ccgtgcgtta agtcggtgtg aggtaacgag cgtcgctacg
    16021 gcggcgctct cttcagcgtt atgctttccg aggtttctat gtctcatcgc cgctcaaccg
    16081 ttaaaggctc actctccttt gccaacccta cggttcgtgc ctggttattc cagatccttg
    16141 ccgttgttgc tgttgtcgga attgttggtt ggttatttca caacactgta acgaatctc
//
LOCUS       DADMHC010000082        15866 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.082, whole genome shotgun sequence.
ACCESSION   DADMHC010000082 DADMHC010000000
VERSION     DADMHC010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15866)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15866)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15866
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.082"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..587)
                     /locus_tag="JNZ57_002188"
     CDS             complement(<1..587)
                     /locus_tag="JNZ57_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
                     /protein_id="HAY8828401.1"
                     /translation="MDMGSQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSS
                     WGIDDRDDLLRTIHRMIENGHAARLAGFYHRWFRYSPCEWRDYLAELNEQGQAYAQFV
                     ASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQ
                     YFAGYTFGRQYWQSPEDDHLPLLREFLARKEYDDSG"
     gene            750..1727
                     /locus_tag="JNZ57_002189"
     CDS             750..1727
                     /locus_tag="JNZ57_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HAY8828402.1"
                     /translation="MIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSP
                     DDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDNEHAIFWLKKTALQGHTFASN
                     ALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYK
                     QAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQSNRHAQFQIAWDYNAGE
                     GVDQDYKQAMYWYLKAAAQESVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDA
                     TAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEIRETEDLL"
     gene            complement(1797..2279)
                     /locus_tag="JNZ57_002190"
     CDS             complement(1797..2279)
                     /locus_tag="JNZ57_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon-containing protein"
                     /protein_id="HAY8828403.1"
                     /translation="MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELT
                     RTEVDELTRAVRRDLEEFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWR
                     EVFPDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP
                     "
     gene            2514..5096
                     /gene="leuS"
                     /locus_tag="JNZ57_002191"
     CDS             2514..5096
                     /gene="leuS"
                     /locus_tag="JNZ57_002191"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008456064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HAY8828404.1"
                     /translation="MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYP
                     SGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTY
                     DNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCP
                     NDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLNDLDKLDHWPDTVKS
                     MQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENNP
                     ELAAFIDECRNTKVAEAEMATMEKKGVDTGFKAVHPLTGEEIPVWAANFVLMEYGTGA
                     VMAVPGHDQRDYEFASKYGLNIKPVILAADGSEPDLSQQALTEKGVLFNSGEFNGLDH
                     EAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVMPTPDDQL
                     PVILPEDVVMDGITSPIKADPEWAKTTVNGMPALRETDTFDTFMESSWYYARYTCPEY
                     KEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQ
                     GMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSK
                     NNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVYEHTA
                     KGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKLAKAP
                     TDGEQDRALMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEKAMVED
                     STLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLN
                     LVVG"
     gene            5111..5692
                     /gene="lptE"
                     /locus_tag="JNZ57_002192"
     CDS             5111..5692
                     /gene="lptE"
                     /locus_tag="JNZ57_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HAY8828405.1"
                     /translation="MRYLATLLLSLAVLITAGCGWHLRDTTQVPSTMKVMILDSGDPN
                     GPLSRAVRNQLRLNGVELLDKETTRKDVPSLRLGKVSIAKDTASVFRNGQTAEYQMIM
                     TVNATVLIPGRDIYPISAKVFRSFFDNPQMALAKDNEQDMIVKEMYDRAAEQLIRKLP
                     SIRAADIRSDEEQTSTTTDTPATPARVSTTLGN"
     gene            5692..6723
                     /gene="holA"
                     /locus_tag="JNZ57_002193"
     CDS             5692..6723
                     /gene="holA"
                     /locus_tag="JNZ57_002193"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HAY8828406.1"
                     /translation="MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAA
                     QGFEEHHTFSIDPNTDWNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTG
                     LLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNL
                     ELDDAANQVLCYCYEGNLLALAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWV
                     DALLMGKSKRTLHILQQLRLEGSEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKH
                     RVWQNRRGMMGEALNRLSQMQLRQAVQLLTRTELTLKQDYGQLVWAELEGLSLLLCHK
                     PLADVFIDG"
     gene            6725..7366
                     /gene="nadD"
                     /locus_tag="JNZ57_002194"
     CDS             6725..7366
                     /gene="nadD"
                     /locus_tag="JNZ57_002194"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HAY8828407.1"
                     /translation="MKSLQALFGGTFDPVHYGHLNPVETLANLIGLTRVTIIPNNVPP
                     HRPQPEANSVQRKHMLELAIADKPLFTLDERELKRNAPSYTAQTLKEWRQEQGPDVPL
                     AFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTHNQED
                     LHLQPAGKIYLAETPWFNISATIIRERLQNGESCEDLLPEPVLTYINQQGLYR"
     gene            7390..8000
                     /locus_tag="JNZ57_002195"
                     /pseudo
     CDS             7390..8000
                     /locus_tag="JNZ57_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415171.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobalamin/alpha-ribazole phosphatase"
     gene            8260..8577
                     /gene="rsfS"
                     /locus_tag="JNZ57_002196"
                     /gene_synonym="rsfA"
     CDS             8260..8577
                     /gene="rsfS"
                     /locus_tag="JNZ57_002196"
                     /gene_synonym="rsfA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308702.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HAY8828408.1"
                     /translation="MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTS
                     SRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEK
                     LWS"
     gene            8581..9048
                     /gene="rlmH"
                     /locus_tag="JNZ57_002197"
     CDS             8581..9048
                     /gene="rlmH"
                     /locus_tag="JNZ57_002197"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010618862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HAY8828409.1"
                     /translation="MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRG
                     KNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLI
                     GGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE"
     gene            9079..10980
                     /gene="mrdA"
                     /locus_tag="JNZ57_002198"
     CDS             9079..10980
                     /gene="mrdA"
                     /locus_tag="JNZ57_002198"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-transpeptidase MrdA"
                     /protein_id="HAY8828410.1"
                     /translation="MKLQNSFRDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQI
                     VRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTL
                     DALRSVVDLTDDDIAAFRKERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKG
                     YKRRYYPYGSALTHVIGYVSKINDKDVERLNNDGKLANYAATHDIGKLGIERYYEDVL
                     HGQTGYEEVEVNNRGRVIRQLKEVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVVVT
                     DPRTGGVLALVSTPSYDPNLFVDGISSKDYSALLNDPNTPLVNRATQGVYPPASTVKP
                     YVAVSALSAGVITRNTTLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTRSLEESADTFF
                     YQVAYDMGIDRLSEWMGKFGYGHYTGIDLAEERSGNMPTREWKQKRFKKPWYQGDTIP
                     VGIGQGYWTATPIQMSKALMILINDGIVKVPHLLMSTAEDGKQVPWVQPHEPPVGDIH
                     SGYWELAKDGMYGVANRPNGTAHKYFASAPYKIAAKSGTAQVFGLKANETYNAHKIAE
                     RLRDHKLMTAFAPYNNPQVAVAIILENGGAGPAVGTLMRQILDHIMLGDNNTDLPAEN
                     PAVAAAEDH"
     gene            10983..12095
                     /gene="mrdB"
                     /locus_tag="JNZ57_002199"
                     /gene_synonym="rodA"
     CDS             10983..12095
                     /gene="mrdB"
                     /locus_tag="JNZ57_002199"
                     /gene_synonym="rodA"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004885876.1"
                     /note="rod shape-determining protein RodA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase MrdB"
                     /protein_id="HAY8828411.1"
                     /translation="MTDNPNKKTFWDKVHLDPTMLLILLALLVYSALVIWSASGQDIG
                     MMERKIGQIAMGLVIMVVMAQIPPRVYEGWAPYLYIICIILLVAVDAFGAISKGAQRW
                     LDLGIVRFQPSEIAKIAVPLMVARFINRDVCPPSLKNTGIALVLIFMPTLLVAAQPDL
                     GTSILVALSGLFVLFLSGLSWRLIGVAVVLVAAFIPILWFFLMHDYQRQRVMMLLDPE
                     SDPLGAGYHIIQSKIAIGSGGLRGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVG
                     ILILLALYILLIMRGLWIAARAQTTFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGV
                     PLPLVSYGGSALIVLMAGFGIVMSIHTHRKMLSKSV"
     gene            12106..13194
                     /gene="rlpA"
                     /locus_tag="JNZ57_002200"
     CDS             12106..13194
                     /gene="rlpA"
                     /locus_tag="JNZ57_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic peptidoglycan transglycosylase RlpA"
                     /protein_id="HAY8828412.1"
                     /translation="MRKQWLGICIAAGMLAACTSDDGQQQTVSVPQPAVCNGPIVEIS
                     GADPRFEPLNATANQDYQRDGKSYKIVQDPSRFSQAGLAAIYDAEPGSNLTASGEAFD
                     PTQLTAAHPTLPLPSYARITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSN
                     NTKVRIDPIIVAQDGSLSGPGMACTTVAKQTYALPAPPDLSGGAGTSSVSGPQGDILP
                     VSNSTLKSEDPTGAPVTSSGFLGAPTTLAPGVLEGSEPTPAPQPVVTAPSTTPATSPA
                     MVTPQAASQSASGNFMVQVGAVSDQARAQQYQQQLGQKFGVPGRVTQNGAVWRIQLGP
                     FASKAEASTLQQRLQTEAQLQSFITTAQ"
     gene            13334..14545
                     /gene="dacA"
                     /locus_tag="JNZ57_002201"
     CDS             13334..14545
                     /gene="dacA"
                     /locus_tag="JNZ57_002201"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase DacA"
                     /protein_id="HAY8828413.1"
                     /translation="MNTIFSARIMKRLALTTALCTAFISAAHADDLNIKTMIPSVPQI
                     DAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQTMKAGKFKETDLVTIGN
                     DAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVG
                     LMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFT
                     FNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKG
                     REAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDMYLTIPRGRM
                     KDLKASYVLNSSELHAPLQKNQVVGTINFQLDGKTIEQRPLVVLQEIPEGNFFGKIID
                     YIKLMFHHWFG"
     gene            14656..14919
                     /locus_tag="JNZ57_002202"
     CDS             14656..14919
                     /locus_tag="JNZ57_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HAY8828414.1"
                     /translation="MKTKLNELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYT
                     PTVKPSSKGNYHSVSITINATHIEQVETLYEELGKIDIVRMVL"
     gene            15020..15661
                     /gene="lipB"
                     /locus_tag="JNZ57_002203"
     CDS             15020..15661
                     /gene="lipB"
                     /locus_tag="JNZ57_002203"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415163.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HAY8828415.1"
                     /translation="MYQDKILVRQLGLQPYEPISQAMHEFTDTRDDSTLDEIWLVEHY
                     PVFTQGQAGKAEHILMPGDIPVIQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELV
                     TLLEQTVVNTLAELGIEAHPRADAPGVYVGEKKICSLGLRIRRGCSFHGLALNVNMDL
                     SPFLRINPCGYAGMEMAKISQWKPEATTNNIAPRLLENILALLNNPDFEYITA"
BASE COUNT         3977 a         4001 c         4087 g         3801 t
ORIGIN      
        1 ccggaatcgt cgtattcttt acgcgctaag aattcgcgta ataaaggcag atgatcatct
       61 tcgggagact gccaatattg ccgaccaaag gtataaccgg caaagtattg ccgccagtta
      121 ctataataac gtagagcccg tagatgaata cgcgactgga tccatagact ttcttcttca
      181 ctcaaccagt tattaagtac gcccattcga cttaaaaaac ccatccggac ataatcccat
      241 gctttaattc ctccctcacc acagcattcg gctgtgctgg cgacaaattg cgcataagcc
      301 tgaccttgct catttaattc agcaagatag tcacgccatt cacatggaga ataacgaaac
      361 cagcggtgat aaaaccctgc caaccgagcg gcatgaccgt tctcgatcat tcggtgaatt
      421 gtgcgtagca ggtcatcacg gtcatcaatt ccccatgagg aagaaaggtc aaaaaagcat
      481 gtacctaaat acattttggg ggatgaatgc gaaggtaaac agcattcatt gcgtatttcc
      541 atcggagtgg aaagtgcaaa caatattttt tgcgacccca tgtccatata atttatcctt
      601 aaacattcat ttaatgaatg taaactacat ttcgagactc agttatttat acttttctga
      661 cgcgacataa tacgcataaa ataaggctta cgcaaaaatg gaacacataa aatataatat
      721 gttttatcta caaccataag gaaatgataa tgatttttac gtcaagttgc tgcgataatt
      781 tatcaataga tgagattatc gaacgtgctg aaaaaggcga ttgcgaggct caatatattg
      841 ttgggtttta ttataatcgc gatagcgcaa ttgactctcc ggacgacgaa aaggcctttt
      901 actggctgaa gctggccgcc gagcaaggtc attgtgaagc acaatattcc ttaggacaaa
      961 agtatactga ggataaaagc cgtcataaag ataatgagca tgccatcttt tggctgaaaa
     1021 aaactgccct acaaggccat actttcgctt ccaacgccct tggctggata ctggatcgtg
     1081 gagaagaccc caattataaa gaagcggttg tctggtatca gatagccgcg gagagcggaa
     1141 tgtcttatgc gcaaaataat cttgggtgga tgtacagaaa tggcaacgga gtcgcaaaag
     1201 actatgcgct ggcatttttc tggtacaaac aagctgcatt acaaggccat agtgacgcgc
     1261 aaaacaatct ggccgatctt tatgaagacg gaaaaggcgt tgctcaaaac aagacactcg
     1321 ccgcattctg gtatttgaaa agcgcacagc agagtaatcg gcacgcccag tttcaaattg
     1381 catgggatta taacgctggc gaaggggtgg accaggacta taagcaagcg atgtactggt
     1441 atctgaaggc tgccgctcag gaaagcgtcg gcgcttacgt caacatcggt tatatgtata
     1501 aacacggaca aggcgttgag aaagattatc aggctgcctt tgaatggttt acgaaagccg
     1561 ctgaatgcaa tgacgccact gcctggtata acctggccat tatgtatcac tacggagaag
     1621 gaagacctgt cgatctccga caggctctcg acctgtatcg taaagttcag tcatccggaa
     1681 ccagagatgt cagtcaggaa attcgtgaga ctgaagattt actgtagaga taaaaacaag
     1741 ggccggggaa tttcattcgg cccatattct ctttattgct gtgcgaaatc agactattac
     1801 ggctcaaacg ggcgtctctg gaactggtca tgaccacatt tcgggcatag cgtcagcact
     1861 tccggtgtgt agatcgggag atggaagtga catttctcgc agaccagatt tcccagcccg
     1921 accacttctc cgctgtgata aaccccatga tgattgaggt ccgggaaaac ttcgcgccat
     1981 tcaagctgcg ttttatcggt gatatctgcc agctcctgcc ataagctttc tttaatcacc
     2041 cgcataaaga cgctgtcaga ttcttctttc aggctctctt catagctcat ggcgaactct
     2101 tccaggtcac gtcttacagc tcgcgtcagc tcatcgacct cggttcgcgt taactcccct
     2161 gtttttatta cgcgctcgcg cgcctgttcc accagtgcgt cgatatcacg ttcgccattg
     2221 cgcaggcgtt cgctcagtga cgcgaccagt tcacggtaat attgagcaac cttgttcatc
     2281 gtttcatctc ccgggtcgtt aactgactat aataatagac gttctttgtt ccttgctttg
     2341 ctaatacgcc cacaaactct gtaaattaat gtatgaataa tccgggcatc atttcaacgt
     2401 cgagtgcgcg aaaggctgtt ttgacgcgga cgtttgggct atgctatgcg gatctgaaaa
     2461 accacctcaa cgctacattt gtagccgtat tgaaaacagg accactggct gccatgcaag
     2521 agcaataccg cccggaagag atagaatcca aagtacagct tcattgggat gagaagcgca
     2581 catttgaagt aaccgaagac gagagcaaag agaagtatta ctgcctgtct atgcttccct
     2641 atccttctgg tcgactacac atgggccacg tacgtaacta caccatcggt gacgtgatcg
     2701 cccgctacca gcgtatgctg ggcaaaaacg tcctgcagcc gatcggctgg gacgcgtttg
     2761 gtctgcctgc ggaaggcgcg gcggtgaaaa acaacaccgc tccggcaccg tggacgtacg
     2821 acaacatcgc gtatatgaaa aaccagctca aaatgctggg ctttggttat gactggagcc
     2881 gcgagctggc aacctgtacg ccggaatact accgttggga acagaaattc ttcaccgagc
     2941 tgtataaaaa aggcctggta tataagaaga cttctgcggt caactggtgc ccgaacgacc
     3001 agaccgtact ggcgaacgaa caagttatcg acggctgctg ctggcgctgc gataccaaag
     3061 ttgaacgtaa agagatcccg cagtggttta tcaaaatcac tgcttacgct gacgagctgc
     3121 tcaacgatct ggataaactg gatcactggc cagacaccgt taaaagcatg cagcgtaact
     3181 ggatcggtcg ttccgaagga gtggagatca ccttcaacgt taacgactat gacaacacgc
     3241 tgaccgttta cactacccgc ccggacacct ttatgggttg tacctacttg gcggtagctg
     3301 cgggtcatcc gctggcgcag aaagcggcgg aaaataatcc tgaactggcg gcctttattg
     3361 acgaatgccg taacaccaaa gttgccgaag ctgaaatggc gacgatggag aaaaaaggcg
     3421 tcgatactgg ctttaaagct gttcacccat taacgggcga agaaattccc gtttgggcag
     3481 caaacttcgt attgatggag tacggcacgg gcgcagttat ggcggttccg ggtcacgacc
     3541 agcgcgacta cgagtttgcc tctaaatacg gcctgaacat caaaccagtt atcctggctg
     3601 ctgacggctc tgagccagat ctttctcagc aagccctgac tgaaaaaggc gtgctgttca
     3661 actctggcga attcaacggt cttgaccatg aagcggcctt caacgccatc gccgataaac
     3721 tgactgcgat gggcgttggc gagcgtaaag tgaactaccg cctgcgcgac tggggtgttt
     3781 ctcgtcagcg ttactggggc gcgccgattc cgatggtgac gctggaagac ggtaccgtaa
     3841 tgccgacccc ggacgaccag ctgccggtga tcctgccgga agatgtggtg atggacggca
     3901 ttaccagccc gattaaagca gatccggagt gggcaaaaac taccgttaac ggtatgccag
     3961 cgctgcgtga aaccgacact ttcgacacct ttatggagtc ctcctggtac tatgcgcgct
     4021 acacttgccc agagtacaaa gaaggtatgc tggattccga agcggctaac tactggctgc
     4081 cggtggatat ctacattggt ggtatcgaac acgccattat gcacctgctc tacttccgct
     4141 tcttccacaa actgatgcgt gatgcaggca tggtgaactc tgacgaacca gcgaaacagt
     4201 tgctgtgtca gggtatggtg ctggcagatg ccttctacta tgttggcgaa aacggcgaac
     4261 gtaactgggt ttccccggtt gatgctatcg ttgaacgtga cgagaaaggc cgtatcgtga
     4321 aagcgaaaga tgcggcaggc catgaactgg tttataccgg catgagcaaa atgtccaagt
     4381 cgaagaacaa cggtatcgac ccacaggtga tggttgaacg ttacggcgcg gacaccgttc
     4441 gtctgtttat gatgtttgct tctccggctg atatgactct agaatggcag gaatccggtg
     4501 tggaaggggc taaccgcttc ctgaaacgtg tctggaaact ggtttacgag cacacagcaa
     4561 aaggtgatgt tgcggcactg aacgttgatg cgctgactga agatcagaaa gcgctgcgtc
     4621 gcgatgtgca taaaacgatc gctaaagtga ccgatgatat cggccgtcgt cagaccttca
     4681 acaccgcaat tgcggcgatt atggagctga tgaacaaact ggcgaaagca ccaaccgatg
     4741 gcgagcagga tcgcgctctg atgcaggaag cgctgctggc cgttgtccgt atgcttaacc
     4801 cgttcacccc gcacatctgc ttcacgctgt ggcaggaact gaaaggcgaa ggcgatatcg
     4861 acaacgcgcc gtggccggtt gctgacgaaa aagcgatggt ggaagactcc acgctggtcg
     4921 tggtgcaggt taacggtaaa gtccgtgcca aaatcaccgt tccggtggac gcaacggaag
     4981 aacaggttcg cgaacgtgct ggccaggaac atctggtagc aaaatatctt gatggcgtta
     5041 ccgtgcgtaa agtgatttac gtaccaggta aactcctcaa tctggtcgtt ggctaagcgc
     5101 gggaggaagc gtgcgatatc tggcaacatt gttgttatct ctggcggtgt taatcaccgc
     5161 cgggtgtggc tggcatctgc gtgataccac gcaggttcct tccactatga aggtcatgat
     5221 cctggactca ggcgatccga acgggccatt aagccgtgcg gtgcgtaacc agttacgtct
     5281 gaatggtgtc gagttgcttg ataaagaaac cacgcgtaag gacgttccat ccctgcgttt
     5341 gggtaaagtg agcatcgcga aagataccgc atcggtattc cgtaacggtc aaacagcaga
     5401 gtatcagatg atcatgacgg tgaatgcgac cgtgttgatc cccggccgtg atatctaccc
     5461 gattagcgcc aaagtcttcc gttcgttctt tgataacccg caaatggcgt tagcgaaaga
     5521 taacgaacaa gacatgatcg taaaagagat gtacgaccgt gctgccgaac agctgattcg
     5581 taagctgcca agcatccgtg ctgcggatat tcgttccgac gaagaacaga cgtcgaccac
     5641 aacggatact ccggcaacgc ctgcacgcgt ctccaccacg ctgggtaact gatgattcgg
     5701 ttgtacccgg aacaactccg cgcgcagctc aatgaagggc tgcgcgcggc gtatctttta
     5761 cttggtaacg atcctctgtt attgcaggaa agccaggacg ctgttcgtca ggtagctgcg
     5821 gcacaaggat tcgaagaaca ccacactttt tccattgatc ccaacactga ctggaatgcg
     5881 atcttttcgt tatgccaggc tatgagtctg tttgccagtc gacaaacgct attgctgttg
     5941 ttaccagaaa acggaccgaa tgcggcgatc aatgaacaac ttctcacact caccggactt
     6001 ctgcatgacg acctgctgtt gatcgtccgc ggtaataaat taagcaaagc gcaagaaaat
     6061 gccgcctggt ttactgcgct tgcgaatcgc agcgtgcagg tgacctgtca gacaccggag
     6121 caggctcagc ttccccgctg ggttgctgcg cgcgcaaaac agctcaactt agaactggat
     6181 gacgcggcaa atcaggtgct ctgctactgt tatgaaggta acctgctggc gctggctcag
     6241 gcactggagc gtttatcgct gctctggcca gacggcaaat tgacattacc gcgcgttgaa
     6301 caggcggtga atgatgccgc gcatttcacc ccttttcatt gggttgatgc tttgttgatg
     6361 ggaaaaagta agcgcacatt gcatattctt cagcaactgc gtctggaagg cagcgaaccg
     6421 gttattttgt tgcgcacatt acaacgtgaa ctgttgttac tggttaacct gaaacgccag
     6481 tctgcccata cgccactgcg tgcgttgttt gataagcatc gggtatggca gaaccgccgg
     6541 ggcatgatgg gcgaggcgtt aaatcgctta agtcagatgc agttacgtca ggccgtgcaa
     6601 ctcctgacac gaacggaact caccctcaaa caagattacg gtcagttagt gtgggcagag
     6661 ctggaagggt tatctcttct gttgtgccat aaacccctgg cggacgtatt tatcgacggt
     6721 tgatatgaaa tctttacagg ctctgtttgg cggcaccttt gatccggtgc actatggtca
     6781 tctaaacccc gtggaaacgc tggcgaattt gattggtctg acgcgggtca caatcatccc
     6841 taataatgtt cctccgcatc gtccccagcc ggaagcgaac agcgtgcagc gtaaacacat
     6901 gcttgaactg gcgattgccg acaagccatt atttactctt gatgaacgcg agctaaagcg
     6961 caatgccccc tcttacactg cgcaaacact gaaagagtgg cggcaggaac aaggaccgga
     7021 cgtgccgctg gcgtttatta ttggtcagga ttcactgctg acctttccga cctggtacga
     7081 atacgaaacg atactcgaca atgcacattt gatcgtctgt cggcgtccag gttacccact
     7141 tgaaatggcg caaccgcaat accagcaatg gctggaagat catttgacac ataaccagga
     7201 agatcttcac cttcagcctg ccggtaaaat ttatctggct gaaacgccgt ggtttaacat
     7261 ctcggcgacc atcatccgcg aacgtttgca aaacggtgaa tcgtgtgagg atttattgcc
     7321 ggaaccggta ctgacttaca ttaaccaaca aggcttgtat cgctgatacc tgtcgttacg
     7381 gagggcatga tgcgactgtg gttaattcgt catggtgaaa cgcaagcgaa tatcgatggt
     7441 ctttacagcg gtcatgcgcc ccccccctga ccgcgcgcgg tattgagcaa gcgcaaaatc
     7501 tgcatacgct gctacatggt gtttcctttg atctggtttt atgcagtgaa ctggaacggg
     7561 cacagcatac cgcgcgactg gttctcagtg accgccagct ccccgtgcaa atcatccctg
     7621 aactcaacga aatgtttttt ggcgactggg agatgcgaca tcatcgcgac ctcatgcaag
     7681 aagatgccga aaactatagc gcgtggtgca atgactggca gcatgcaatc cccacgaacg
     7741 gtgaaggatt tcaggcattt tcgcaacgtg tggaacgctt tatcgcaagg cttagtgaat
     7801 ttcagcacta tcagaatatt ttagtcgtca gccatcaggg tgtactgagt ctgttaatcg
     7861 cccgtttaat tggcatgcct gccgaggcta tgtggcattt tcgcgttgac taggggtgtt
     7921 ggagcgccat tgatatcaac caaaaattcg cgacgctacg cgtcctcaat agccgtgcca
     7981 tcggggtcga taatgcatga cttttctgtt tttttacggg taagccgcaa cgaccattga
     8041 cagacccggg caggctgata ttctccgcag ccagactttt ttcgccagac acgactttgt
     8101 agaaattgtt ttacaaaaat ggcgatgcaa tctgcggcgc ggggtgggat gatagcccac
     8161 tttcgaaagc cgattcggcg acaattgtcc cgaaatcgcc tctggttcag gtatactgac
     8221 agaccatttt tatctatttg attcacccag ggggaaaact tgcagggtaa agcactccag
     8281 gattttgtta tcgacaaaat tgatgacctc aaaggtcagg acatcatcgc cttagacgtt
     8341 caaggcaaat ccagcatcac cgactgcatg atcatctgta cgggtacgtc cagccgtcat
     8401 gttatgtcca ttgctgacca cgttgtgcag gagtctcgcg cagcgggcct gttaccgctc
     8461 ggcgtagaag gtgaaaacag cgccgactgg attgtcgtgg atttgggcga tgtgattgtc
     8521 catgtcatgc aggaagagag ccgtcgcctg tatgaactgg aaaaactctg gagttaatgc
     8581 gtgaagctgc aacttgtcgc cgtgggaacg aaaatgccgg actgggtaca aaccggtttt
     8641 accgagtacc tgcgtcgttt tccgaaagat atgcccttcg agctgattga aattccggcc
     8701 ggaaaacgcg gcaagaatgc ggacatcaag cgcatactcg acaaagaggg tgagcagatg
     8761 ttggcggccg caggcaaaaa ccgcattgtc accctcgata ttccaggcaa gccctgggat
     8821 acgccgcagt tagccgctga gctggaacgc tggaagctgg atggtcgcga cgtcagtcta
     8881 ctgattggcg ggcctgaagg gttgtcgcct gcctgtaaag cggcggcgga gcagagctgg
     8941 tcgctgtcgg cgcttaccct cccccatccg ctggttcgcg tgctggtcgc agagagtctg
     9001 taccgggcgt ggagcatcac caccaaccat ccttatcacc gtgagtgata agggagcttt
     9061 gagtagaaaa cgcagcggat gaaactacag aactcttttc gcgactatac ggcagagtcc
     9121 gcgctgtttg tgcgccgggc gctggtcgcc tttttgggga ttttgctgct gaccggcgtg
     9181 cttatcgcca acctgtataa tctgcaaatt gttcgcttta ccgactacca gacccgctct
     9241 aatgaaaacc gcattaagct ggtgcctatc gcgcccagcc gcggcattat ttacgaccgt
     9301 aatggtatcc ctctggccct caaccgcact atctaccaga tagaaatgat gccagagaaa
     9361 gtcgataacg tgcagcaaac gctggacgct ttgcgcagcg tggttgatct gaccgatgac
     9421 gatattgctg cattccgaaa agagcgcgca cgttcacacc gtttcacctc tattcccgtg
     9481 aaaactaacc tgaccgaagt acaagtagct cgctttgccg tcaatcagta ccgttttccg
     9541 ggggttgaag ttaaaggcta taaacgtcgt tactatcctt acggttcggc gttgacccac
     9601 gtcatcggct atgtgtcgaa aatcaacgat aaagacgtcg aacgcctgaa taatgacggc
     9661 aaactggcca actatgcggc aacgcatgat atcggtaagc tgggcattga gcgttactat
     9721 gaagacgtgc tgcacggtca gaccggttat gaagaggttg aagttaacaa ccgtgggcgt
     9781 gttatccgcc agttaaaaga agtaccaccg caagccggac acgatattta cctgacgctg
     9841 gatctcaaac tccagcaata tattgaaacg ctgctggcgg gtagccgcgc agctgtggta
     9901 gtcaccgatc cgcgtacagg tggggtgctg gcgctggttt ccacgcctag ttatgaccca
     9961 aacttgtttg ttgacggtat ctccagcaaa gattattccg ccttgttgaa cgacccgaat
    10021 acaccgctgg tgaaccgcgc cacacagggg gtttatcctc ccgcgtctac agttaaaccc
    10081 tatgtggcgg tttcggcatt gagcgccggg gtgatcacgc gcaatacgac gctgtttgac
    10141 ccaggctggt ggcaactgcc aggttcggaa aaacgttatc gtgactggaa aaaatggggc
    10201 cacgggcgtc tgaatgtcac aagatcgctg gaagaatctg cggatacctt cttctatcag
    10261 gtggcctacg atatggggat cgatcgcctc tccgaatgga tgggtaaatt cggttatggt
    10321 cattacaccg gtatcgacct ggcggaagaa cgttccggca acatgcctac ccgcgaatgg
    10381 aaacagaaac gctttaaaaa accgtggtat cagggtgaca ccattccggt tggtatcggt
    10441 cagggttact ggacagcgac cccaatccag atgagtaagg cactgatgat cctgattaat
    10501 gacggtatcg tgaaggttcc gcatttgctg atgagcaccg ccgaagacgg caaacaggtg
    10561 ccatgggtac aaccgcatga accgcccgtc ggcgatattc attccggtta ctgggagctg
    10621 gcgaaagacg gtatgtacgg tgttgctaac cgccctaacg gtacggcgca taaatacttt
    10681 gccagcgcac cgtacaaaat tgcggcgaaa tctggtaccg ctcaggtctt cggtctgaaa
    10741 gcgaacgaaa cctataatgc gcacaaaatt gccgagcgtt tacgtgacca caaactgatg
    10801 accgcctttg cgccatacaa caatccgcaa gtggctgtcg ccattattct ggagaacggc
    10861 ggcgcgggtc cggcggttgg tacgctgatg cgtcagatcc tcgaccacat tatgctgggt
    10921 gataacaaca ccgatctgcc tgcggaaaat ccagcggttg ccgcagcgga ggaccattaa
    10981 tcatgacgga taatccgaat aaaaaaacat tctgggataa agtccatctc gatcccacaa
    11041 tgctgctgat cttactggca ttgctggttt acagcgccct ggttatctgg agcgccagcg
    11101 gtcaggatat tggcatgatg gagcgtaaaa tcggccaaat cgcaatgggt ctggtcatca
    11161 tggtggtgat ggcgcaaatt cctccacgcg tttatgaagg ctgggccccc tatctctata
    11221 tcatctgtat tattttgctg gtggcggtag atgctttcgg tgccatctct aaaggtgctc
    11281 aacgctggct ggacctcggt attgttcgtt ttcagccgtc ggaaattgcc aaaatagccg
    11341 taccactgat ggttgcgcgc tttatcaacc gcgatgtttg cccaccgtcg ttgaagaaca
    11401 caggcatcgc gctggtgctg atatttatgc ccacgctgct ggtggctgca cagcctgacc
    11461 tgggaacatc aatcctcgtt gcgctttccg gtctgtttgt actgttcctc tctggcctta
    11521 gctggcgtct gattggcgtc gcagtagtgc tggtggcggc gttcattcct attctgtggt
    11581 tcttcctgat gcatgattac cagcgccagc gcgtaatgat gctcctggac ccggaatcag
    11641 acccactcgg cgcgggctat cacattattc agtctaaaat tgctattggc tccggcggat
    11701 tacgcggcaa aggctggctg catggcactc agtcacaact tgaatttcta cccgaacgcc
    11761 ataccgactt tatcttcgcg gtactggcgg aagagctggg attagtgggc attttgattc
    11821 tgctcgctct ctacattctg ctgatcatgc gcgggctgtg gatagccgcc agagcgcaaa
    11881 ccacctttgg tcgcgtcatg gctggcggct taatgctgat attattcgtt tatgtcttcg
    11941 taaatattgg tatggtaagc ggtattctgc cggttgtagg ggttccgctc ccactggtca
    12001 gttatggagg atcagcgcta attgtgctga tggctgggtt cgggattgta atgtcaatcc
    12061 acacccacag gaaaatgttg tcgaaaagcg tgtaagaggt gcgcaatgcg taagcagtgg
    12121 ctcgggatct gcatcgcggc aggaatgctc gcggcatgta caagcgatga tggtcagcaa
    12181 cagacggtaa gtgtaccgca gcctgcggta tgtaacggcc ccatagttga aattagcggg
    12241 gcggacccgc gtttcgaacc actgaacgcg acggcaaatc aggattacca gcgcgacggt
    12301 aaaagctaca aaatcgtgca ggatccgtct cgatttagcc aggcgggact ggcggcaatc
    12361 tatgatgccg aaccaggcag taacctgacg gcctctggcg aagctttcga tccgacacag
    12421 ctgacggcgg cccatccaac gcttccgctc cccagctacg ccagaatcac taacctggct
    12481 aacgggcgaa tgatcgtggt gcgcattaat gatcgcggcc cttacggcaa cgaccgcgtt
    12541 atttcgcttt ctcgcgcggc agctgaccgt cttaacacgt caaacaacac caaagttcgt
    12601 atcgatccga ttattgtcgc ccaggatggt tcgctttctg gtcctggtat ggcttgtacc
    12661 acagtcgcca aacagactta cgccctgcct gcacctcccg atttaagcgg tggcgcggga
    12721 acaagttcag tgtctggccc gcagggtgac attcttccgg tcagtaattc gacgctaaaa
    12781 agcgaagatc cgaccggcgc gccggtaacc agtagcggtt tcctcggcgc accaacgacc
    12841 ttagcgcctg gtgtactgga aggcagcgaa ccgacgcctg cgccacagcc cgttgttaca
    12901 gctccgtcga caacgcctgc aacctcgcct gcaatggtga caccgcaagc cgcctcgcaa
    12961 agcgccagcg gcaactttat ggtgcaagtc ggggccgtta gcgatcaggc tcgtgcgcaa
    13021 cagtaccaac agcaactggg acagaagttc ggcgtccccg gtcgcgtaac tcaaaatggc
    13081 gcggtctggc ggatccagct tggccccttc gccagcaaag ccgaagccag taccttgcag
    13141 caacgtttgc aaaccgaagc ccaattacag tcatttatta ccaccgcgca gtagcgtaaa
    13201 gcaggcatct gatgtgtcaa tttctgtaaa tgacgttaac aaagtcacgc ggaaagtcag
    13261 atgcctgccg gtagtgcatt tgctatagta gggcactttt tttaattcca tcacggatgt
    13321 cgtagttcag accatgaata ccattttttc cgctcgtatc atgaagcgcc tggcgctcac
    13381 cacggctctt tgcacagcct ttatctctgc tgcacatgcc gatgacctga atatcaaaac
    13441 tatgatcccg agtgtaccgc agatcgatgc ggagtcctac atcctgattg actataactc
    13501 cggcaaagtg ctcgccgaac agaacgcaga tgtccgccgc gatcctgcca gcctgaccaa
    13561 aatgatgacc agttacgtta tcggccaaac aatgaaagcc ggtaaattta aagaaactga
    13621 tttagtcact atcggcaacg acgcatgggc caccggtaac ccggtgttta aaggttcttc
    13681 gctgatgttc ctcaaaccgg gcatgcaggt tccggtttct cagctgatcc gcggtattaa
    13741 cctgcaatcg ggtaacgatg cttgtgtcgc catggctgat tttgccgctg gtagccagga
    13801 cgcttttgtt ggcttgatga acagctacgt taacgccctg ggcctgaaaa acacccactt
    13861 ccagacggta catggtctgg atgctgatgg tcagtacagc tccgcgcgcg atatggcgct
    13921 gatcggccag gcgttgatcc gtgacgtacc gaatgaatac tcgatctata aagaaaaaga
    13981 atttacgttt aacggtattc gccagctgaa ccgtaacggc ctgttatggg ataacagcct
    14041 gaatgtcgac ggcatcaaaa ccggacacac tgacaaagca ggttacaacc ttgttgcttc
    14101 tgcgactgaa ggccagatgc gcttgatctc tgcggtgatg ggcggacgta cttttaaagg
    14161 ccgtgaagcc gaaagtaaaa aactgctgac ctggggcttc cgtttcttcg aaaccgttaa
    14221 cccactgaaa gtaggtaaag agttcgcctc tgaaccggtt tggtttggtg attctgatcg
    14281 cgcttcgtta ggggttgata aagacatgta cctgaccatt ccgcgtggtc gcatgaaaga
    14341 tctgaaagcc agctatgtgc tgaacagcag tgaattgcat gcgccgctgc aaaagaatca
    14401 ggtcgtcgga actatcaact tccagcttga tggcaaaacg atcgagcaac gcccgctggt
    14461 tgtgttgcaa gaaatcccgg aaggtaactt cttcggcaaa atcattgatt acattaaatt
    14521 aatgttccat cactggtttg gttaaaaatt gaacacttga aagtgtaatt tccgtcccca
    14581 tatactaagc atcagtaaaa aaactcccgc cttctggcgg gagttgctat ttaattacgt
    14641 tacgccggag ctgacatgaa aaccaaactt aacgaactgc ttgaattccc tactcctttt
    14701 acttacaaag ttatggggca ggcgttacct gagctggttg atcaggtggt tgaagtggta
    14761 cagcgccatg cgccaggtga ctacacccca acggtaaaac caagcagcaa aggcaactac
    14821 cactcggtat ctatcactat caacgccact catatcgagc aggttgaaac actgtatgaa
    14881 gaactgggca aaatcgatat tgtccgcatg gttctgtaac tcgcttctcc gttacccggc
    14941 tcctggtcgg gtaactcccc tctcctcgct gtgatatact tttcccccac ttttactcat
    15001 tctccacgga gatgccgttt tgtatcagga taaaattctt gtccgccagc tcggtcttca
    15061 gccttacgag ccaatctccc aggctatgca tgaattcacc gatacccgcg atgatagtac
    15121 ccttgatgaa atctggctgg tcgagcacta tccggtattc acccaaggtc aggcaggaaa
    15181 agcggagcac attttaatgc cgggtgatat tccggtgatc cagagcgatc gcggtgggca
    15241 ggtgacttat cacgggccgg gacaacaggt gatgtatgtg ttgcttaacc tgaaacgccg
    15301 taaactcggt gtgcgtgaac tggtgacctt gcttgagcaa acagtggtga ataccctggc
    15361 tgaactgggt atagaagcgc atcctcgggc tgacgcgcct ggtgtctatg tcggggaaaa
    15421 gaaaatttgc tcactgggtt tacgaattcg acgcggttgt tcattccacg gtctggcatt
    15481 aaacgtcaat atggatcttt caccattttt acgtattaat ccttgtgggt atgccggaat
    15541 ggaaatggct aaaatatcac aatggaaacc cgaagcgacg actaataata ttgctccacg
    15601 tttactggaa aatattttag cgctactaaa caatccggac ttcgaatata ttaccgctta
    15661 attccataca tcaatggccc aatttacact gggtcattac tcataatacc tgctaatgct
    15721 ttacatctcc ttcgcgtttg tatattttct ttatcacttg cagaaatgcg gtgccacgcc
    15781 ttgctccgta actcagccca ttgattaacc tattgaaata gttgattatg gtgagcaaaa
    15841 gcgttccgtt ccaattagac ataaga
//
LOCUS       DADMHC010000083        15789 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.083, whole genome shotgun sequence.
ACCESSION   DADMHC010000083 DADMHC010000000
VERSION     DADMHC010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15789)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15789)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15789
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.083"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(1..2651)
                     /locus_tag="JNZ57_002204"
                     /pseudo
     CDS             complement(1..2651)
                     /locus_tag="JNZ57_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415720.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            complement(3419..4510)
                     /gene="ychF"
                     /locus_tag="JNZ57_002205"
     CDS             complement(3419..4510)
                     /gene="ychF"
                     /locus_tag="JNZ57_002205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001538644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HAY8828416.1"
                     /translation="MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVV
                     PMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGH
                     VVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKA
                     ELAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPY
                     LDQVREIAAKEGSVVVPVCAAVEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKL
                     LNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQ
                     GAKEAGKMRAEGKDYIVKDGDVMNFLFNV"
     gene            complement(4627..5211)
                     /gene="pth"
                     /locus_tag="JNZ57_002206"
     CDS             complement(4627..5211)
                     /gene="pth"
                     /locus_tag="JNZ57_002206"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HAY8828417.1"
                     /translation="MTIKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAK
                     FFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGV
                     AKLKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQK
                     LIDEAIDEAARCTEMWFTDGLTKATNRLHAFKAQ"
     gene            5489..5767
                     /gene="ychH"
                     /locus_tag="JNZ57_002207"
     CDS             5489..5767
                     /gene="ychH"
                     /locus_tag="JNZ57_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress-induced protein YchH"
                     /protein_id="HAY8828418.1"
                     /translation="MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAH
                     GAVLSIFVGAILWLAGARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS"
     gene            complement(5822..7501)
                     /gene="dauA"
                     /locus_tag="JNZ57_002208"
     CDS             complement(5822..7501)
                     /gene="dauA"
                     /locus_tag="JNZ57_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415724.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylic acid transporter DauA"
                     /protein_id="HAY8828419.1"
                     /translation="MNKIFSSHVMPFRALIDACWKEKYTAARFTRDLIAGITVGIIAI
                     PLAMALAIGSGVAPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQFGL
                     AGLLVAALLSGIFLILMGLARFGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQM
                     VHVPEHYLQKVGALFMALPTINVGDAAIGIVTLGILVFWPRLGIRLPGHLPALLAGCA
                     VMGIVNLLGGHVATIGSQFHYVLADGSQGNGIPQLLPQLVLPWDLPNSEFTLTWDSIR
                     TLLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKANSELVGQGLGNIIAPFFGGITATA
                     AIARSAANVRAGATSPISAVIHSILVILALLVLAPLLSWLPLSAMAALLLMVAWNMSE
                     AHKVVDLLRHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTRLAP
                     VVVDVPDDVLVLRVIGPLFFAAAEGLFTDLESRLEGKRIVILKWDAVPVLDAGGLDAF
                     QRFVKRLPEGCELRVCNVEFQPLRTMARAGIQPIPGRLAFFPNRRAAMADL"
     gene            complement(7626..8573)
                     /locus_tag="JNZ57_002209"
     CDS             complement(7626..8573)
                     /locus_tag="JNZ57_002209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HAY8828420.1"
                     /translation="MPDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQI
                     NENVRGGDIFIIQSTCAPTNDNLMELVVMVDSLRRASAGRITAVIPYFGYARQDRRVR
                     SARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQLN
                     LDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVL
                     VDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIP
                     LSDEIKSLPNVRTLTLSGMLAEAIRRISNEESISAMFEH"
     gene            complement(8724..9575)
                     /gene="ispE"
                     /locus_tag="JNZ57_002210"
     CDS             complement(8724..9575)
                     /gene="ispE"
                     /locus_tag="JNZ57_002210"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HAY8828421.1"
                     /translation="MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIE
                     LRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGG
                     GLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEIL
                     TPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKR
                     FREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLS
                     PLHRAML"
     gene            complement(9575..10198)
                     /gene="lolB"
                     /locus_tag="JNZ57_002211"
     CDS             complement(9575..10198)
                     /gene="lolB"
                     /locus_tag="JNZ57_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein localization protein LolB"
                     /protein_id="HAY8828422.1"
                     /translation="MPLPDFRLIRLLPLAALVLTACSVTTPKGPGKSPDSPQWRQHQQ
                     DVRNLNQYQTRGAFAYISDQQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNAQPGN
                     VQLVDNKGQRYTADDAEEMIGKLTGMPIPLNSLRQWILGLPGDATDYKLDDQYRLSEI
                     TYSQNGKNWKVVYGGYDTKTHPAMPANMELTDGGQRIKLKMDNWIVK"
     gene            10412..11668
                     /gene="hemA"
                     /locus_tag="JNZ57_002212"
     CDS             10412..11668
                     /gene="hemA"
                     /locus_tag="JNZ57_002212"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707119.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HAY8828423.1"
                     /translation="MTLLALGINHKTAPVSLRERVSFSPDKLDQALDSLLAQPMVQGG
                     VVLSTCNRTELYLSVEEQDNLQEALIRWLCDYHNLNEEDLRKSLYWHQDNDAVSHLMR
                     VASGLDSLVLGEPQILGQVKKAFADSQKGHMKASELERMFQKSFSVAKRVRTETDIGA
                     SAVSVAFAACTLARQIFESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRER
                     AQILADEVGAEVIALSEIDERLREADIIISSTASPLPIIGKGMVERALKSRRNQPMLL
                     VDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMA
                     WLRAQSASETIREYRSQAEHVRDELTAKALAALEQGGDAQAIMQDLAWKLTNRLIHAP
                     TKSLQQAARDGDNERLNILRDSLGLE"
     gene            11710..12792
                     /gene="prfA"
                     /locus_tag="JNZ57_002213"
     CDS             11710..12792
                     /gene="prfA"
                     /locus_tag="JNZ57_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012132158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HAY8828424.1"
                     /translation="MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQ
                     LSDVSRCFTDWQQVQEDIETAQMMLDDPEMREMAQDELRKAKEKSEQLEQQLQVLLLP
                     KDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYK
                     EIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDIN
                     PADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGA
                     RIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVME
                     GKLDMLIEPIIQEHQADQLAALSEQE"
     gene            12792..13625
                     /gene="prmC"
                     /locus_tag="JNZ57_002214"
     CDS             12792..13625
                     /gene="prmC"
                     /locus_tag="JNZ57_002214"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HAY8828425.1"
                     /translation="MEYQHWLREAISQLQASESPRRDAEILLEHVTGRGRTFILAFGE
                     TQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQA
                     LARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKN
                     IHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIV
                     HIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRYY
                     Q"
     gene            13622..14014
                     /locus_tag="JNZ57_002215"
     CDS             13622..14014
                     /locus_tag="JNZ57_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB family protein"
                     /protein_id="HAY8828426.1"
                     /translation="MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIV
                     PPVVDTVLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQ
                     ARIIAFPLALVVLYIIIKLATTKVPLLG"
     gene            14018..14827
                     /locus_tag="JNZ57_002216"
     CDS             14018..14827
                     /locus_tag="JNZ57_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat-containing protein"
                     /protein_id="HAY8828427.1"
                     /translation="MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSL
                     AKEEISQLLPLEEQLEKLIALFYGDWGFKASRGVYRLSDALWLDQVLKNRQGSAVSLG
                     AVLLWVANRLDLPLLPVIFPTQLILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNI
                     SPSAELFYEDLDEADNIEVIRKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEI
                     RDRGLIYAQLDCEHVALNDLSYFVEQCPEDPISEMIRAQINNIAHKHIVLH"
     gene            14863..15717
                     /gene="kdsA"
                     /locus_tag="JNZ57_002217"
     CDS             14863..15717
                     /gene="kdsA"
                     /locus_tag="JNZ57_002217"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HAY8828428.1"
                     /translation="MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTV
                     TQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEPSQA
                     QPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGN
                     EKVILCDRGANFGYDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRR
                     AQVAELARAGMAVGLAGLFIEAHPDPEHAKCDGPSALPLAKLEPFLKQMKAIDDLVKG
                     FEELDTSK"
BASE COUNT         3934 a         3937 c         4011 g         3907 t
ORIGIN      
        1 catagacatt cagctggctg ttgcctgcgg tgatgtcata ccccagtatc atgctggcac
       61 gccccagcag cgattcgtag tgattcagat gtatattgag gccattactc gccttcatag
      121 ccatctcatt ctggtggctg tatgtaagct gggtttgcgg ctctatatag aacccataac
      181 cagtagggga caggttgaac ctctgcccgg cttccaggga gatgctcatt ccattcgcag
      241 tgccgttggc gttaacgccg ttgttatgac tgtccagtac gtggaaacta tttttctggc
      301 gcgatgcttt tataacgaga tcgctgtaaa aaccgttttg tgccatgtaa ctggcgtaca
      361 ttcccatgta gtctgaacgt gcggtaccgt cgcctccgct atagtccggc gatgcatgtg
      421 ttgagccaat atacagaccg acatacaacg gcatttcatc agagagacgt ttatccccac
      481 caaactggat accgctgtaa cccatgtcaa agccgctcag tttgccactg gcaaaggagt
      541 ccaggcttcc cccataactg tgcaaccaga tattaccgtc tttactctga tttcgcaggt
      601 cacccatccg ttgcatcagc gtacggtttt caacatagtt caataagtaa ccgacattga
      661 gataattgcc gccagcatct gcggtcgtgg tgggtttagg cgtgggagcg ggttcaggcg
      721 taggatcggg gttgactatg ggaggctgag cgggagctgg tgtgggttca ggattaggag
      781 tcggttccgg aactgtcccg gaagcgtaaa gctcccagtt agtgccattt ttacgcacat
      841 cgtacagata tcccccccaa ctcaacctga gaagacgcgc tgaacgaggc cgcgccgtca
      901 gtggttttta ccactgtcag aacttcattt cccgttgtgg cctcgctgcc ctggttgcgg
      961 atagccaata cgtgattacc agcactactc ccgctgatat tcaataaatc ccctttatta
     1021 ttaacgccat taccctcgcc aacaacatca gcacgcataa taaaggtact gttaccgctc
     1081 aggttctcta cgtttaatgt ggcaaatgtg ccggcagttg acccgtggct ggcaaaatcg
     1141 acagttgaat ggctcagcgc cagcgtgtcg agattagaat tacttgttac gttccagacg
     1201 ctgttattca ttgcaacgtc cagttttccg ccattgacat tatcgctgag ggaggaacct
     1261 gtccaaaccg acccagggtg catatccaga ttgattagcc cacctttgga aaaaacgcta
     1321 ccgttgataa gcatacgacc cgaggcgttg atgcggctgg cggcataacc atcgtcatgt
     1381 tgcattgcaa tggccatctg gtcgggtgta ctcatatcaa tgaccagatc gctcgtgagg
     1441 tcgatctggc tgttggtcat ggcataaatt cccctggctc ctgccgcgcc ggtgatagcc
     1501 aaactgtctc cggttattct accgccgctg agcgcccaca aacccagcgc cagactgcca
     1561 ttacgatcaa ctgtaatatc ggtattttgc atgttgacaa cagccgttgc cgtctgggcc
     1621 gaggcaccat aagaaccgcc ggaaaagatg ctgtttcgtt gcgctgccgt gccagaaaaa
     1681 ttgattgtcg cgtctgaacc actggtgacg aggccaccgc cctgcgcgga agaaatatgg
     1741 ctatctgcac cgatagtggt tgtaccacca cgaacttcga cgccattggc cgcggctcca
     1801 gttacatcaa cagtgagtgc attcgcgcta acctggccaa agctccagag gccgtgtgca
     1861 ttatcgccat tggttttaat ggaactgttt gttccgagat cgacaacaga gtttttctgt
     1921 acgcttatcc ccatggcgct gtagccctga acatcgattg tcaggtctgt agccgtaaaa
     1981 cgcgcagcac cattggcgtt attgccgttg agaccaccga tataaacacc tgtacttcca
     2041 tcggtcgtga ttttacttcc gcttccaaga tcgacactgg tgccatagtc attgatggtt
     2101 aggcctatac cgttcgagtt ttcaatggtg aattgagtgg ctgttagtgt tgagctatgc
     2161 ccaataatga tgccgtcatc gttactctta atggtgctgc ctgtgcctaa gtcagcatgg
     2221 gtatagtcac caattaagtt aatgccgatg gcagaggttt gaccaacaac atctactgtg
     2281 agtcggttag ctgtcaggga gctgtttttg ccctgaataa tgattccttt tgcatatcca
     2341 gaggcgtcgt tgacattgac ggtgacatca ttacccaggt tgatattgcc aggcgtgttt
     2401 cctgctgggg tcattacacc atagaggttt cctgatggat cggcggtatc tcctgtaatt
     2461 ctgtcaccat cattaatagt aatattggtg ccatattgac ttcctgtatc agcagctatc
     2521 agcagggggg aaaagataat tgcattcaaa ccaatagcgc caaattttat cagttgaatt
     2581 gagggcgaac ggatttttaa ttcagcgaga cgatctgctt tggtattccc attgtgttgt
     2641 ttgatgccca taccactcct atatagtacc cagactatgg gtctatggat tttgtcattt
     2701 tgtttaaatc aatgaataat atcctcttat catcatgata tttgtatggt gtaatcatga
     2761 tgagcttctc agagaataat tctctattac cgggcaaaat caggacacag gaattaatat
     2821 atatttaaca tcccccttac aaaggtgagt ttatatcgac ttattcccta agttgtcgtt
     2881 acttattcca attcgttact ataaatatgg caaaaatatt acaacaaaca gcggttaaaa
     2941 aatttggtga agattttttg taataatcct aattagttat gggaatttcg cttgatgtat
     3001 ctgcataaca aaaacaatat gcgccatttt tgcattacta ataagaaaaa gcaaaaaaca
     3061 tcgatattca tttttggtca atgggttttc tggcctatcg ttgttattgt gctactggtt
     3121 atcattttca tcttgccagc atattggagc gtgatcaatt ttgatcagct gtgaaggtgg
     3181 ctgatgtgta gtgatacaaa aacttacgtt atatcactgc taatgagata tccgtcatct
     3241 gaacacttat gtctttaatt attctcgtgg ttcactatag gcaataagca caaaagtgta
     3301 ggatgttaca agaatgatta ggactcggtg aaatgaaaaa tccacgcaat tgcgtggatt
     3361 ttatatactt ttgcgctctt catgagattt agcgaaacct catgagacaa taaattaatt
     3421 agacgttgaa aaggaagttc atcacatcgc catctttcac gatgtaatct ttaccttctg
     3481 cacgcatttt gcctgcttct ttcgcgcctt gttcaccttt gtaagtgatg aaatcttcaa
     3541 acgagatggt ttgtgcacgg ataaagcctt tttcaaaatc agtatggatt ttgcccgctg
     3601 cctgcggcgc ggttgctcca accggaatgg tccatgcacg cacttctttc accccagcgg
     3661 tgaagtaagt ttgcaggttc agcagcttat aaccggcacg gatcacacgg ttcaggcccg
     3721 gctcttccag cccaagctcc tgcataaact cgtcacgttc ttcgtcgtcc agttcggcaa
     3781 tgtctgcttc aacagcagca caaaccggaa ccacaacaga accttctttc gccgcgattt
     3841 cacgcacctg gtcaagatat gggttgtttt caaaaccgtc ttcgttgacg ttggcgatgt
     3901 acattgttgg tttcagcgtc aggaagctca ggtaacgaat agccgctttc tcttcagcgc
     3961 ttaaatccag cgcgcgcagc atacctgcat tttccaactg gggcaggcat ttttccagga
     4021 ccgccagctc agctttcgcg tctttatcgc cacctttggc tttcttctgt acgcgatgaa
     4081 tcgcacgttc gcaggtgtcg aggtctgcca gcgccagttc ggtgttgata acttcaatat
     4141 cgtcagccgg gttaactttg ccggaaacgt gaatgatgtt gtcattttca aagcagcgaa
     4201 caacgtgacc gatcgcttcg gtttcacgga tgttggtcag gaactggtta cccagacctt
     4261 cgcctttcga tgcgcctttt accagaccgg cgatatcgac aaattccatg gtcgtgggaa
     4321 gcgtacgctg cggttttacg atttcagcca gttgatccag gcgaggatca ggcattggta
     4381 cgacacctgt gttcggctca atggtgcaga atggaaagtt ggccgcttca ataccggctt
     4441 tggtcagcgc gttgaacagg gtagatttcc cgacgttggg caaaccgacg ataccgcatt
     4501 tgaatcccat gatttaaatc accttaatat cttaataatc aacctgttat tgctaacaga
     4561 ttgcagaaat ggaaataact ttgcctatta tacacggcac tcggcaaaaa tgccgcagac
     4621 aacgacttat tgcgctttaa aggcgtgcaa tcggttcgtt gctttggtca agccatctgt
     4681 aaaccacatt tcagtacaac gcgccgcttc gtcaatggct tcatcaatta acttctgttc
     4741 actaacaggc ggtttgccta acacaaaacc gacaacttta tttttatcgc ccggatgacc
     4801 gattccgatg cgtaaacggt gaaagttagg gttattaccc aatttactga tgatgtcttt
     4861 cagtccattg tgaccaccat ggccaccgcc caattttaat ttggcgacgc caggaggcag
     4921 atccagttcg tcgtgggcca ccagaatttc gtccggatta atgcggaaaa aactggccat
     4981 cgccgcaacg gctttgccgc tgagattcat aaatgtagtc gggactaaca ggcggacatc
     5041 ttcgcctcca agagtgactc gcgaagtata accaaagaat ttagcctctt cgcgcagcgg
     5101 agcgcgcaaa cgctctgcca gtaagtcaac gaaccaggca ccagcattat gtcgcgttgc
     5161 ggcgtattca gcaccggggt tcgccaggcc gacaatcaat ttaatcgtca cgtttttttg
     5221 tcctgagtgt gtacataact ggcgcgtagt ttactggttg cggccccgct tgacaaaaaa
     5281 ctgcgtatca aatgcagata acgtaataat tgcctgagtg gactattaga aagtcaaggt
     5341 gttcaggcgt ttatttgtaa agttttgttg aaataagggt tgtaattgtg atcacgcccg
     5401 cacataaccc acagggtgtt gtctatactt tacacataag gaagaggggt attccctgtt
     5461 acaacccaga aagttccgga ggtgacatat gaaacgcaaa aacgcttcgt tactcggtaa
     5521 cgtgctcatg gggttgggtc tggtggtaat ggtggtcggc gtggggtatt caatcctcaa
     5581 ccagttacca cagtttaata tgccccagta tttcgcacat ggtgcagtgc taagtatttt
     5641 cgtcggtgcc attctctggc tggcgggtgc ccgtgttggc gggcatgaac aggtgtgcga
     5701 ccgttactgg tgggttcgcc actatgacaa acgttgccgc cgtagcgata atcgccgtca
     5761 tagctaacaa ataatgcagt ttgctgacca gtcagtttgc gctgactggt caatctcgta
     5821 cttataaatc cgccatcgcc gcgcgacgat tcgggaagaa cgcgaggcgt cccgggatcg
     5881 gttgaatgcc tgcgcgagcc atagtgcgca gtggctggaa ttccacgttg cacacgcgca
     5941 gttcacatcc ttcgggcaga cgcttcacaa aacgctggaa cgcatcaaga ccaccagcat
     6001 caagtaccgg aacggcatcc cacttcagaa tcacaatccg tttgccttca agacgtgact
     6061 ccaggtccgt gaacaagcct tcagcagcag caaaaaacag cgggccaata acgcgcagta
     6121 ccagaacatc gtctggaaca tctacgacta ccggtgccag gcgagtcata cgtgcgatac
     6181 gacgcataaa cagcagcgat gccagcacga tccccacgct gatggcaata accatatcaa
     6241 acagcacggt cagcgacatg cacagcagca tgacaatgat gtcatctttc ggtgcatgac
     6301 gcagcaagtc gaccacttta tgcgcttcac tcatgttcca cgccaccatc aacagcaggg
     6361 ctgccatagc ggaaagcggc agccaggaga gcagcggtgc cagtaccagc agggcaagaa
     6421 taaccagaat agagtggatc accgctgaga taggggaagt tgccccggca cggacgttag
     6481 cggcagaacg cgcgatggca gctgtagcgg taataccacc aaagaatgga gcgataatat
     6541 tccccagtcc ctgtccaacc agttcgctgt tcgccttgtg tttcgtcccg gtcataccat
     6601 ccagtaccac ggcgcagagc agagattcga ttgcgccgag cattgccatt gagaatgccg
     6661 caggcagcag tgtgcgaata gaatcccagg ttagcgtgaa ttctgaatta ggcagatccc
     6721 acggcagcac cagttgcggc agcagttgcg gaataccgtt accctgagaa ccatcggcca
     6781 ggacgtagtg gaattgcgaa ccgatggtag caacatgtcc gccgagcagg ttaacaatcc
     6841 ccatcaccgc gcaaccagcc agcaaggccg gaaggtgacc gggtaaacga atgcccagac
     6901 gcggccaaaa aacaagaata cctagcgtca caatgccaat ggcagcatca cccacattaa
     6961 tggtcggcag cgccataaat aatgcgccga ctttttgtag ataatgttcc gggacatgga
     7021 ccatttgcag accgagaaaa tctttaatct gcatggtacc gatggtgatc ccgatacccg
     7081 aggtgaaacc taaggtgacg gaaaccggaa tatactcaat caggcgacca aagcgtgcca
     7141 gacccatcag aatcaaaaag atccccgaca gcaaggccgc aaccagcagt cctgccagtc
     7201 caaactgttg cgacacggga tagagaatta ccacaaatgc cgcagtcgga ccggaaacgc
     7261 taaagcgtga cccacccgtc agagcaatga caatccccgc aacagctgcg gtatataaac
     7321 cgtactgggg tgccacacca ctaccaatag ccaacgccat cgccagcggg atagcaataa
     7381 tcccgacggt tatcccggca atcaggtcac gggtaaaccg tgcggcagta tatttttctt
     7441 tccagcaagc gtcgatcaga gcgcggaaag gcatcacatg tgaggaaaat attttgttca
     7501 caataatgtt tcatccgtga gcgcatcatc tgtcaactaa atggcaggtg aaggaggcat
     7561 aggtcataca aatggatatt acagacaaaa aaacccgccg cagcgggtct ttgagccggg
     7621 ttcgattagt gttcgaacat ggcagagatc gattcttcgt tgctgatacg acgaatcgct
     7681 tcggccagca tacctgacag ggtcagagta cgcacgttcg gcagtgattt gatttcatcg
     7741 ctcagcggaa tggtatcgca gacaacgact tcatcaatta cagagttacg caggttgttc
     7801 gccgcgttgc cagagaagat cgggtgagtc gcgtacgcaa atacacgttt agcaccacgt
     7861 tctttcagag cttcagcagc tttacacagc gtaccgccag tgtcgatcat atcatcgacc
     7921 agtacgcagt cacgacctgc aacgtcaccg atgatatgca tcacctggga aacgttcgca
     7981 cgcggacgac gtttgtcgat gattgccata tcggtatcgt tcagcagctt agcgatagcg
     8041 cgggcacgca caacgccgcc gatgtccgga gaaaccacaa ttgggttatc cagattcagc
     8101 tgcagcatgt cttccagcag gatcgggcta ccaaatacgt tatcaaccgg aacgtcgaag
     8161 aaaccctgaa tctgttcagc gtgcagatcc actgtcagca cacggtcaac accgacgctg
     8221 gagaggaagt ctgcaaccac tttcgcagtg attggtacac gagcggaacg gacgcgacgg
     8281 tcctggcgcg catagccaaa gtaggggata acagcggtga tacgacctgc ggaagcacga
     8341 cgcagggaat caaccataac gactaattcc atcaggttgt cgttagtagg ggcacaagtg
     8401 gactggatga tgaaaatatc accaccgcgt acattttcat taatttgtac gctgacttcg
     8461 ccatcgctaa agcgacctac agcggcgtcg ccgagtgaag tgtacaggcg gttggcaata
     8521 cgttgtgcta gttccggggt ggcgttacca gcaaaaagct tcatatcagg cacgagaaga
     8581 acctcaggca tgcgtccatt ggtggaaaga atctgccgaa aactgtgcgg gccaggcatg
     8641 atcctttcca ggcggtgtat taaagagcgc gatgcaacgt ctggaacaag gtgacgttgt
     8701 caccgaaact cagcttgccc ggcttaaagc atggctctgt gcaatgggga aagattaacg
     8761 cctttcgcca caaagccatt gagccattcc ggggcttgct ctagcacctg gcgggcttca
     8821 gactctgtat caaattcagc aaagacacag gcccctgtcc cagtcaggcg cgacggggcg
     8881 tattctaaca gccaggaaag caccgcatca acctcgcgaa aacgttttct tgcgataacc
     8941 tcgcaatcat tgctgaattc acattttagc aacgtttcta ttgacctttt tggcgtattg
     9001 cgcgggagtt caggatcttt aaaaatcacc ggagtcggaa tacttacacc agggtgcgcc
     9061 accagatacc acttctctgg cggatccacc ggcgttagta tttcaccaac gccttcggca
     9121 aacgcggcat gcccccgaac aaagacagga acatctgcgc ccagcgtcag ccccatttcc
     9181 gccagctcat ccatgcttag cccgcattgc cagagatgat ttaatgccac caggaccgtc
     9241 gcggcattgg atgaaccacc gccgagaccg ccgcccatcg gcaaacgctt gtcaatgctg
     9301 atattcgcac cgcttcccgt cggaagacgc ccgctgtctg ccgcagtttt catcaacaat
     9361 cgcgctgcgc gaacgatcag gttatcttca tgttccacgc cttcaacggg cgttaacaga
     9421 cgaatatccc catcgtcacg aagctcaatg ctgatggtgt cgccgtaatc aagaaactga
     9481 aacagcgttt gcagcgtgtg gtaaccatcc gcacgctgac cggtaatgta taaaaacaga
     9541 ttaagttttg ccggagaggg ccactgtgtc cgcattattt cactatccag ttatccattt
     9601 ttaacttgat gcgttgacca ccgtcggtga gttccatatt ggctggcatc gcaggatgcg
     9661 ttttggtgtc ataaccacca taaacaacct tccagttttt gccattctgg ctgtaggtaa
     9721 tttcgctcag gcggtactgg tcgtccagtt tgtagtcggt tgcatcaccc ggtaaaccta
     9781 aaatccactg gcgcaagctg ttgagcggaa ttggcattcc ggtcaatttg ccaatcatct
     9841 cttcggcgtc atcggcggta taacgctgac ctttattgtc gactaactgc acgttacccg
     9901 gttgagcatt cagctccagt tccgtgctgc ccaatgggtt agtgagcagc agacggtagc
     9961 gatcctggcc ggtttgctgc cagaaaaagc gggcgtacac tttttgttgg tcagaaatat
    10021 aagcgaacgc gccgcgagtc tgatactgat taagattgcg cacgtcttgc tgatgctgac
    10081 gccattgtgg cgaatccggg cttttgccag gacctttggg cgtggtaacg gaacaggcag
    10141 tgagcacaag agcagccagc ggtagcaggc ggataagacg aaaatcgggc aggggcatag
    10201 tgatgacaag tccttgagat acgttgcagt tataaccctt aatgctagcg ttaccgtccg
    10261 ctatcgtcta tgttcaagtt gtcttaattg ccagaatcta acggctttcg gcaattactc
    10321 caaaaggggg cgctctcttt tattgatctt acgcatcctg tatgatgcaa gcagactaac
    10381 cctatcaacg ttggtattat ttcccgcaga catgaccctt ttagcactcg gtatcaacca
    10441 taaaacggca cctgtatcgc tgcgagaacg tgtatcgttt tcgccggata agctcgatca
    10501 ggcgcttgac agcctgcttg cgcagccgat ggtgcagggc ggcgtggtgc tgtcgacgtg
    10561 caaccgcacg gaactttatc ttagcgttga agagcaggat aacctgcaag aggcgttaat
    10621 ccgctggctt tgcgattatc acaatcttaa tgaagaagat ctgcgtaaaa gcctctactg
    10681 gcatcaggat aacgacgcgg ttagccattt aatgcgtgtt gccagcggcc tggattcact
    10741 ggttcttggg gagccgcaga tcctcggtca ggttaaaaaa gcgtttgccg attcgcaaaa
    10801 aggtcatatg aaggccagcg aactggaacg catgttccag aaatctttct ctgtagcgaa
    10861 acgcgttcgc actgaaacag atatcggtgc cagtgctgtg tctgtcgctt ttgcggcttg
    10921 tacgctggcg cggcagatct ttgaatcgct ctctacggtc acagtgttgc tggtaggcgc
    10981 gggcgaaacc atcgagctgg tagcgcgtca tctgcgcgaa cataaagtac agaagatgat
    11041 tatcgccaac cgcactcgcg aacgtgccca aattctggca gatgaagttg gcgcggaagt
    11101 gattgccctg agtgagatcg acgaacgtct gcgcgaagcc gatatcatca tcagttccac
    11161 cgccagcccg ttaccgatta tcgggaaagg catggtggag cgcgcattaa aaagtcgtcg
    11221 taaccaacca atgctgttgg tggatattgc cgttccgcgc gatgttgagc cggaagttgg
    11281 caaactggcg aatgcttatc tttatagtgt ggacgatctg caaagcatca tttcgcacaa
    11341 cctggcgcag cgtaaagccg cagcggttga ggcggaaact attgtcgctc aggaaaccag
    11401 cgaatttatg gcgtggctgc gagcacaaag cgccagcgaa accattcgcg agtatcgcag
    11461 ccaggcagag cacgttcgcg atgagttaac cgccaaagcg ttagcggccc ttgagcaggg
    11521 cggcgacgcg caagccatta tgcaggatct ggcatggaaa ctgactaacc gcttgatcca
    11581 tgcgccaacg aaatcacttc aacaggccgc ccgtgacggg gataacgaac gcctgaatat
    11641 tctgcgcgac agcctcgggc tggagtagca gtacatcatt ttcttttttt acagggtgca
    11701 tttacgccta tgaagccttc tatcgttgcc aaactggaag ccctgcatga acgccatgaa
    11761 gaagttcagg cgttgctggg tgacgcgcaa actatcgccg accaggaacg ttttcgcgca
    11821 ttatcacgcg aatatgcgca gttaagtgat gtttcgcgct gttttaccga ctggcaacag
    11881 gttcaggaag atatcgaaac cgcacagatg atgctcgatg atcctgaaat gcgtgagatg
    11941 gcgcaggatg aactgcgcaa agctaaagaa aaaagcgagc aactggaaca gcaattacag
    12001 gttctgttac tgccaaaaga tcctgatgac gaacgtaacg ccttcctcga agtccgagcc
    12061 ggaaccggcg gcgacgaagc ggcgctgttc gcaggcgatc tgttccgtat gtacagccgt
    12121 tacgccgaag cccgccgctg gcgggtagaa atcatgagcg ccagcgaggg tgaacatggt
    12181 ggttataaag agatcatcgc caaaattagc ggtgatggtg tgtatggtcg tctgaaattt
    12241 gaatctggcg gtcatcgcgt gcagcgtgtt cctgctacgg aatcgcaggg tcgtattcat
    12301 acttctgctt gtaccgttgc ggtaatgcca gaactgcctg acgcagaact gccggacatc
    12361 aacccagcag atttacgcat tgatactttc cgctcgtcag gggcgggtgg tcagcacgtt
    12421 aataccaccg attcggcaat tcgtattact cacttgccga ccgggattgt tgttgaatgt
    12481 caggatgaac gttcacaaca taaaaacaaa gcgaaggcgc tttcagtgct cggtgctcgc
    12541 atccacgctg ctgaaatggc aaaacgccaa caggccgaag cgtctacccg tcgtaacctg
    12601 ctggggagtg gcgatcgcag cgaccgtaac cgtacttaca atttcccgca ggggcgcgtt
    12661 accgatcacc gcatcaacct gacgctctac cgcctggatg aagtgatgga aggtaagctg
    12721 gatatgctga ttgaaccgat tatccaggaa catcaggccg accaactggc ggcgttgtcc
    12781 gagcaggaat aatggaatat caacactggt tacgtgaagc aataagccaa cttcaggcga
    12841 gcgaaagccc gcggcgtgat gctgaaatcc tgctggagca tgttaccggc agagggcgta
    12901 cttttattct cgcctttggt gaaacgcagc tgactgacga acaatgtcag caacttgatg
    12961 cgctactgac acgtcgtcgc gatggtgaac ccattgctca tttaaccggg gtgcgagaat
    13021 tctggtcgtt gccgttattt gtttcgccag cgaccttaat tccgcgcccg gatacggagt
    13081 gtctggtgga gcaggcactg gcgcggttgc ctgaacaacc ttgccgtatt cttgatctcg
    13141 ggacgggtac cggggcgatt gcgcttgcgc tggctagcga gcgcccggac tgcgaaatta
    13201 tcgctgtaga tcgtatgcct gatgctgtct ccctggcaca acgtaatgcc cagcatctgg
    13261 cgatcaaaaa tatccacatt ctgcaaagcg actggtttag cgcgctagcc gggcagcagt
    13321 ttgcgatgat tgtcagcaat ccgccgtata ttgacgagca ggacccacat cttcaacaag
    13381 gcgatgtccg ctttgagccg ctcactgcgc tggttgcggc agacagtgga atggcagaca
    13441 tcgtgcatat catcgaacag tcgcgtaacg cgctggtatc cggcggcttt ctgcttctgg
    13501 aacatggctg gcagcagggc gaagcggtgc gacaagcatt tatcctcgcg gggtatcatg
    13561 acgtcgaaac ctgccgtgac tatggtgata acgagcgcgt aacgctcggc cgctattatc
    13621 aatgacaagt ttttctacac tgcttagtgt tcatcttatt agtatcgcgc tttctgttgg
    13681 gctattaacc ttacgtttct ggctacgtta tcagaagcat ccacaggcat ttgctcgctg
    13741 gacgcgcatt gtgccgccgg ttgtcgatac ggtgttattg ttaagcggca ttgcgttgat
    13801 ggctaaagcg cacatcctgc cattttccgg gcaggcacag tggctgactg aaaagctgtt
    13861 tggagttatc atttatatcg ttttgggttt tattgcactc gattatcgtc gtatgcacag
    13921 tcagcaggcg cgcattattg ccttcccgct ggcgttggtg gtgctgtaca tcatcattaa
    13981 actcgccacc acaaaagtac cgttactggg gtaagtcatg agatcgttag ctgatttcga
    14041 atttaataaa gcgccattgt gcgaaggcat gatcctggct tgcgaagcaa tccgccgcga
    14101 ttttccctcg caagatgttt acgacgaact ggagcgtctc gttagtctgg cgaaggaaga
    14161 aatcagccag cttctgcctt tagaagagca gctggaaaaa ctgatcgcgc tgttttacgg
    14221 cgactgggga tttaaagcct cacgcggcgt ttatcgtctt tccgatgcat tatggctgga
    14281 ccaggtgtta aagaatcgac agggcagtgc ggtatcatta ggtgcggttt tattatgggt
    14341 cgcgaatcgt ctcgatttgc cgctgctgcc ggtgattttc cctacgcagc tgatattgcg
    14401 cattgaatgt ccggatggcg aaatttggct gattaatcct tttaacggtg aatcgttaag
    14461 cgaacatatg ctggacgtat ggttaaaggg aaatatcagc ccgtcggcgg aactgtttta
    14521 tgaagacctt gatgaagctg ataacattga ggtaatccgc aaattgctgg atacactcaa
    14581 agcctcgttg atggaagaaa atcagatgga gctggcgtta cgcaccagcg aagctttatt
    14641 acaattcaac cctgaagatc cctatgaaat tcgcgatcgc gggttgattt atgcgcaact
    14701 ggattgcgaa cacgttgcgt tgaacgattt aagttatttc gttgaacagt gtccggaaga
    14761 cccgatcagc gaaatgatcc gtgcgcaaat aaataacatc gcgcataaac atattgtgct
    14821 gcattaatta atcgacattt tactcaagat taaggcgatc ctatgaaaca aaaagtggtt
    14881 agcattggcg acatcaacgt agcaaatgac ctgccgttcg tactgtttgg cggtatgaac
    14941 gtgctggaat ctcgcgatct ggcgatgcgc atttgcgagc actacgtaac tgtgacccag
    15001 aaactgggta tcccttacgt gttcaaagcc tcttttgaca aagccaaccg ctcctccatc
    15061 cactcttatc gtggaccggg cctggaagaa gggatgaaaa tcttccagga gttgaagcag
    15121 acttttggcg tgaaaattat caccgacgtt cacgaaccaa gtcaggcaca gcccgttgct
    15181 gatgtcgtgg atgtgattca gttgccggcg tttcttgctc gccagactga cctggttgaa
    15241 gccatggcga aaaccggtgc ggtaattaac gtcaagaaac cacagtttgt cagcccggga
    15301 cagatgggta atatcgttga taaattcaaa gaaggcggca acgaaaaagt gattctttgc
    15361 gatcgtggtg ctaacttcgg ctatgacaac ctggttgtcg atatgctggg cttcagcatt
    15421 atgaagaaag tgtctggtaa ctcgccggtg attttcgacg tgacccacgc actgcaatgc
    15481 cgcgatccgt ttggcgcagc ttccggtggt cgtcgtgctc aggtggctga gctggcacga
    15541 gccggtatgg cggtaggtct ggcggggctg tttattgaag cgcatccgga tccggaacat
    15601 gcgaaatgtg atggtccatc cgcgctgccg ctggctaaac tggaaccgtt cctcaagcag
    15661 atgaaagcga ttgatgatct ggtgaaaggt ttcgaagaac tggataccag caagtaatct
    15721 tttttgcttg aaaaataaag tcttagcgtt ctgcgttaag acttttttca tgggtgccag
    15781 atacaaaaa
//
LOCUS       DADMHC010000084        15477 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.084, whole genome shotgun sequence.
ACCESSION   DADMHC010000084 DADMHC010000000
VERSION     DADMHC010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15477)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15477)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15477
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.084"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..1233)
                     /locus_tag="JNZ57_002218"
     CDS             complement(<1..1233)
                     /locus_tag="JNZ57_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309023.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HAY8828429.1"
                     /translation="MKITTVGVCIICGIFPLLILPQLPGTLTLAFLTLFACVLAFIPV
                     KTVRYIALTLLFFVWGILSAKQILWAGETLTGATQDAIVEITATDGMTTHYGQITHLQ
                     GRRIFPAPGLVLYGEYLPQAVCAGQQWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPL
                     IGRFLQASVIEPNCSLRAQYLASLQTTLQPYMWNAVILGLGMGERLSVPKEIKNIMRD
                     TGTAHLMAISGLHIAFAVLLAAGLIRGGQVFLPGRWIHWQMPLIGGICCAAFYAWLTG
                     MQPPALRTVVALATWGMLKLSGRQWSGWDVWICCLAAILLMDPVAILSQSLWLSAAAV
                     AALIFGYQWFPCPEWQLPPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANL
                     LAIPLVTFITVPLILAAMV"
     gene            complement(1440..1724)
                     /gene="ihfB"
                     /locus_tag="JNZ57_002219"
     CDS             complement(1440..1724)
                     /gene="ihfB"
                     /locus_tag="JNZ57_002219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HAY8828430.1"
                     /translation="MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIE
                     IRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG"
     gene            complement(1884..3557)
                     /gene="rpsA"
                     /locus_tag="JNZ57_002220"
     CDS             complement(1884..3557)
                     /gene="rpsA"
                     /locus_tag="JNZ57_002220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HAY8828431.1"
                     /translation="MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKS
                     ESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY
                     EDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD
                     QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLL
                     HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE
                     GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD
                     IDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH
                     LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK
                     GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV
                     DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE"
     gene            complement(3668..4351)
                     /gene="cmk"
                     /locus_tag="JNZ57_002221"
     CDS             complement(3668..4351)
                     /gene="cmk"
                     /locus_tag="JNZ57_002221"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000125007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HAY8828432.1"
                     /translation="MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLA
                     LAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQ
                     VAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRML
                     QLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQ
                     YARQKLALA"
     gene            complement(4524..5287)
                     /locus_tag="JNZ57_002222"
                     /pseudo
     CDS             complement(4524..5287)
                     /locus_tag="JNZ57_002222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706828.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
     gene            complement(5456..6739)
                     /gene="aroA"
                     /locus_tag="JNZ57_002223"
     CDS             complement(5456..6739)
                     /gene="aroA"
                     /locus_tag="JNZ57_002223"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HAY8828433.1"
                     /translation="MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNL
                     LDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMRPL
                     AAALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGG
                     NVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQ
                     HYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRF
                     ADVLEKMGATICWGDDYISCTRGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNI
                     YNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFS
                     LVALSDTPVTILDPKCTAKTFPDYFEQLARISQAA"
     gene            complement(6810..7898)
                     /gene="serC"
                     /locus_tag="JNZ57_002224"
     CDS             complement(6810..7898)
                     /gene="serC"
                     /locus_tag="JNZ57_002224"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000057138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HAY8828434.1"
                     /translation="MAQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGK
                     EFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYW
                     AATAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAID
                     ETPDFGKDVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKA
                     NIACPSILDYSIFNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELL
                     YGVIDNSDFYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGM
                     RASIYNAMPLEGVKALTDFMVEFERRHG"
     gene            complement(8097..8789)
                     /locus_tag="JNZ57_002225"
     CDS             complement(8097..8789)
                     /locus_tag="JNZ57_002225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF421 domain-containing protein"
                     /protein_id="HAY8828435.1"
                     /translation="MKAFDLHRMAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRG
                     VRQMSLFEVLIILTLGSAAGDVAFYDDVPMVPVLIVFITLALLYRLVMWLMAHSEKLE
                     DLLEGKPVVIIEDGELAWSKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQIS
                     VYFFEDDKVKPGLLILPSDCTQRYKVVPESADYACIRCSEIIHMKAGEKQLCPRCANP
                     EWTKASRAKRVT"
     gene            8919..10679
                     /locus_tag="JNZ57_002226"
     CDS             8919..10679
                     /locus_tag="JNZ57_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     accessory protein YcaO"
                     /protein_id="HAY8828436.1"
                     /translation="MTQTFIPGKDAALEDSIARFQQKISDLGFQIEEASWLNPVPNVW
                     SVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVH
                     YPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTR
                     QSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPE
                     IPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGA
                     HPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDL
                     FKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSD
                     IYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLG
                     LATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQ
                     TLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAH
                     QSLLKAYEKLQRAKAAFWAK"
     gene            11085..11942
                     /gene="focA"
                     /locus_tag="JNZ57_002227"
     CDS             11085..11942
                     /gene="focA"
                     /locus_tag="JNZ57_002227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter FocA"
                     /protein_id="HAY8828437.1"
                     /translation="MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVF
                     ISIAFVFYITATTGTGTMPFGMAKLVGGICFSLGLILCVVCGADLFTSTVLIVVAKAS
                     GRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHT
                     FIEAVCLGILANLMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIP
                     MGIVIRDFASPEFWTAVGSAPENFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWV
                     IYLRENDHH"
     gene            11997..14279
                     /gene="pflB"
                     /locus_tag="JNZ57_002228"
     CDS             11997..14279
                     /gene="pflB"
                     /locus_tag="JNZ57_002228"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HAY8828438.1"
                     /translation="MSELNEKLATAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFL
                     AGATEATTTLWDKVMEGVKLENRTHAPVDFDTAVASTITSHDAGYINKQLEKIVGLQT
                     EAPLKRALIPFGGIKMIEGSCKAYNRELDPMIKKIFTEYRKTHNQGVFDVYTPDILRC
                     RKSGVLTGLPDAYGRGRIIGDYRRVALYGIDYLMKDKLAQFTSLQADLENGVNLEQTI
                     RLREEIAEQHRALGQMKEMAAKYGYDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMS
                     FGRTSTFLDVYIERDLKAGKITEQEAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIW
                     ATESIGGMGLDGRTLVTKNSFRFLNTLYTMGPSPEPNMTILWSEKLPLNFKKFAAKVS
                     IDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGG
                     VDEKLKMQVGPKSEPIKGDLLNYDEVMERMDHFMDWLAKQYITALNIIHYMHDKYSYE
                     ASLMALHDRDVIRTMACGIAGLSVAADSLSAIKYAKVKPIRDEDGLAIDFEIEGEYPQ
                     FGNNDPRVDDLAVDLVERFMKKIQKLHTYRDAIPTQSVLTITSNVVYGKKTGNTPDGR
                     RAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTFSIVPNALGKDDEVR
                     KTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAMENPEKYPQLTIRVSGYAVRF
                     NSLTKEQQQDVITRTFTQSM"
     gene            14471..15211
                     /gene="pflA"
                     /locus_tag="JNZ57_002229"
     CDS             14471..15211
                     /gene="pflA"
                     /locus_tag="JNZ57_002229"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase 1-activating protein"
                     /protein_id="HAY8828439.1"
                     /translation="MSVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWD
                     THGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHT
                     CLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANK
                     NVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYK
                     LDGVKPPKKETMERVKGILEQYGHKVMF"
     gene            complement(15293..>15477)
                     /locus_tag="JNZ57_002230"
     CDS             complement(15293..>15477)
                     /locus_tag="JNZ57_002230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828440.1"
                     /translation="VQMGWEKNISDYLKNMCSYLGIEDADVTFLCNTVVFDGEELHAS
                     YYQSLLSQVRDMVDAL"
BASE COUNT         3959 a         3946 c         3653 g         3919 t
ORIGIN      
        1 aaccatcgcg gcgaggatca acggaaccgt gataaatgtc accaagggaa ttgctaatag
       61 atttgcaata aacgaggtca gactaatgcc atgaaatatg acgatttgca caggcataag
      121 caggagtgtg attcccagtt gcaaatgaat gagggaaaca actgcacgca ataccggcgg
      181 cagttgccac tcaggacagg gaaaccactg gtacccaaaa atcagtgccg cgaccgcagc
      241 ggcagagagc cataaacttt gcgagagaat ggcaacagga tccatcagca aaattgccgc
      301 cagacaacat atccatacat cccagccact ccactgtcgc ccacttaact taagcattcc
      361 ccacgtagca agcgccacca cggtacgcaa tgcaggaggt tgcattcccg tcaaccaggc
      421 ataaaaagca gcacagcaga ttccaccaat taatggcatt tgccagtgga tccagcgccc
      481 aggcagaaaa acttgcccac cgcgaatgag tccggcagcc agcaacaccg caaaagcgat
      541 gtgcaatccc gatatcgcca ttaaatgcgc cgttccagta tcacgcatga tatttttgat
      601 ttctttgggg acggataacc gttcccccat acctaaacca agaataaccg cattccacat
      661 atagggttgc agcgttgttt gtagtgacgc cagatactgt gcacgcaggc tacaattcgg
      721 ttcaatgaca cttgcctgca gaaagcggcc gatgagcggc tgatgctggg caatggcata
      781 acgctggcta tcaaagccgc catcattaag ttggccatga actgcacgaa ctttgagttt
      841 cattgaccat tgttgtccag cacaaaccgc ttgcggaaga tattcgccat acagcacaag
      901 gcctggcgca gggaatatac gtcgaccttg tagatgagta atttgaccgt aatgagtggt
      961 catgccgtca gttgcagtga tctcaacaat tgcatcctgc gtcgcgccag ttaaggtttc
     1021 tcctgcccac aaaatttgct ttgctgataa tatgccccaa acgaaaaaca gcaacgtcag
     1081 cgcgatataa cggacggttt taacagggat aaatgccagt acgcaggcga agagagtcag
     1141 aaacgcaagg gttaatgtcc caggcaattg gggcaaaatc agcaacggaa aaattccgca
     1201 aattatgcat acgccgactg tcgttatttt catgcacccc tccctgttta tggaaagtgt
     1261 gcaactttgt tgagcggttg tctggtggga attttgcgtt ccccgaggca cattcagaag
     1321 aatttaacga aagggtgaaa actgctcaaa actctgcgag gcagcttcca gttcctgatt
     1381 agagaaatga aaaaagcacc cgacaggtgc ttttctcgcg ttcaagtttg agtaaaaact
     1441 taaccgtaaa tattggcgcg atcgcgcagt tctttaccag gtttaaagtg aggaacgtat
     1501 tttccttcca gttctacttt atcgccagtc ttcggattac gtccggtacg tggtgcgcgg
     1561 tagtgcaaag agaaactgcc gaaaccgcgg atttcaatac gctcgccctg cgcaagagtc
     1621 gaggccatat gctccagcat ctcttttact gcatcttcaa ccgtcttggc gggaatgtgc
     1681 gattgctggg tggcaagtct ttctatcaat tctgacttgg tcatgattcc tccggttcct
     1741 taaaggcaaa ttaagcggct gctgttgctg cattgattaa gggcggccgt agccgccctt
     1801 agtgcttgat tacaggacga aacctgcaat ctgtcaagta aactcaacaa acttcggaat
     1861 aaaaatcccg aagagtcaga gaattactcg cctttagctg ctttgaaagc ttcagccatt
     1921 gcgttgttgg agaagtttgc atcttcctgt ttgttaacag ttgcgattgc atctttctcg
     1981 tcagcttcgt ctttcgcacg aacagacagg ctgattgcgc ggtttttacg atcaacgccg
     2041 gtgaatttag cttcaacttc gtcgccaacg ctcagaacca gggtagcgtc ttcaacgcgg
     2101 tcacgggatg cttcagaagc acgcaggtaa ccttcaacgc cgtcagccag ttctacggtt
     2161 gcgcctttag cgtcaactgc agttacttta ccggttacga tagcgccttt cttgttcaga
     2221 gcaacccagt tgttgaacgg atcttctgcg agctgtttaa cgcccaggga gatacgttca
     2281 cgttctgcgt caacctgcag aacaactgca gcgatttcgt cgcctttttt gtattcacga
     2341 actgcttctt cgcctgcaac gttccaggag atgtcagaca ggtgaaccaa gccgtcgatg
     2401 ccgccgtcca ggccgatgaa gataccgaag tcagtgatag acttgatttt accttcaaca
     2461 cggtcgccct tgttgtgggt ttccgcgaac tgctgccacg ggttagcttt gcactgtttc
     2521 agacccaggg agatacgacg acgttcttcg tcgatatcca gaaccataac ttccactaca
     2581 tcgccaacgt taacaacttt ggacgggtgg atgtttttgt tggtccaatc catttcggaa
     2641 acgtgtacca ggccttcaac gccttcttcg atttcaacga agcagccgta gtcggtcagg
     2701 ttggtcacgc gaccagtcag tttggtacct tccggataac gtttagcgat agctacccac
     2761 ggatcttcgc ccaactgttt caggcccagg gatacacggg tacgttcgcg gtcgaacttc
     2821 agcactttaa cagtgatttc gtcgcccacg ttgacgattt cgctcggatg cttaacgcgt
     2881 ttccaggcca tgtcagtgat gtgcagcagg ccgtcaacgc cgcccagatc aacgaatgca
     2941 ccgtagtcag tgaggttctt aacgatacct ttaacttcca tgccttcctg caggttttcc
     3001 agcagctgat cgcgctctgc gctgttttcg gattcgataa cggcacgacg agaaacaaca
     3061 acgttgttgc gcttctgatc cagcttgatt actttaaatt caagctcttt gccttccagg
     3121 tgcagagtgt cacgcaccgg acgaacgtct accagagaac ctggcaggaa cgcacgaata
     3181 ccgttcagct caacagtgaa gccgccctta actttgccgt tgataacacc ggtaacagtt
     3241 tcagcatctt cgtaagcttt ttccagcgtg atccaggctt cgtgacgttt agctttctca
     3301 cgggacagca gagtttcacc gaagccgtct tctactgcgt ccagagcaac gtcaacttcg
     3361 tcacctacct ggatttccag ctcgccctgg gcgtttttga actgctcagc cgggatggcg
     3421 gactcagatt tcagaccagc gtcaaccagt actacgtctt tgtcgatagc aacaacaacg
     3481 ccacgaacga tagaacccgg gcgggtttcg atttctttta aggactcttc aaagagttga
     3541 gcaaaagatt cagtcatgtt taatcttcag gtttatattt aacgtccacc tagctccatg
     3601 ccggatgggg ttgtttaaca tacccgctgt cattccattg caacgggggt actgcaaatt
     3661 cggtcgctta tgcgagagcc aatttctggc gcgcgtattg tagcgctttt tcaatcactt
     3721 gctcaatgct taaggtggtg gaatccaaca ctaaagcatc ggctgccgga accagtggcg
     3781 ctaccgctcg gttacgatcg cggtcgtcgc gttctttgat ctcggccaaa aggcgctcaa
     3841 agttaacact aaagcccttc tcctgcaact gtagcatgcg gcgatgcgca cgttcttccg
     3901 aggaggcgtc aaggaaaatt ttcactggtg catcagggaa taccaccgtt cccatgtcgc
     3961 ggccatcggc aatcagacct ggtaattcgc gaaacgcgcg ttggcgacgc aataatgctt
     4021 cacgaacgcg tgggaatgcc gcgacttgtg aagccgcatt cgccacttcc tgagtacgaa
     4081 tttcgccgct gacatcttcc ccttcgagga tcacttccag attgccattg gttgacacaa
     4141 aacgtacatc cagatgggat gccagcggta ccagcgcatc ttctgacgca acatcaacat
     4201 ggtgatgtaa tgccgccaat gccagtacgc gataaattgc acccgaatcc agcagatgcc
     4261 attgcaatgc ttccgccata gccttacaca aggtgccttt ccctgcaccg cttgggccat
     4321 caatggtaat aaccggggca attgccgtca tctttatctc cttaaaacag gcgtaccgtt
     4381 aacataaccg cgcgcattat acgcgccgac gccacaaatc gttaacgttg tgtgcaaaaa
     4441 ccagttttgt ctgtattcag atggggattt attgcgcaat tatagcaggc tggcagaaga
     4501 ccagcccgaa agatgacaat gatttactta ccagaggcga tacgatcacg gatgtgttgc
     4561 gcacgctctg ttgatggtgg gtgagagtca aacatggact gggtgcgacc gccatccaga
     4621 ctagccagtt tttcaaagct gccaaccagc ccctgggtgc tgatgccacg tttcttcaac
     4681 agatcaaagg agaaatcatc tgcttcggac tctttatcac gggagtattt agcattaata
     4741 gcgccttctg cgatatcacc caattgtgag cgggaaagct gggaagccac accgctggta
     4801 gctgaaatgg catcgcgtgc ggcaacgatc gcataagaag ctttcatttc agccagcgag
     4861 tgacccaacg cgacgtggcc cagttcatgg cccagaacac cttcaatttc gttgtcattc
     4921 atcatgtcca tcaggccact gtagacacgg acacagccgt tcgccatcgc ccatgcgttg
     4981 acgtcgctgg tcatataaac cttatagttg accggcgtgc cattaatatt gttacccaat
     5041 gctttggcga tttttgccag acgtttaccg tacttgctgg atttacttgc gacttgattg
     5101 ccgctgtcca tttcggcaca gccctgattg gcaatcgctt ttgcatcggc atcgcttaat
     5161 gttgctgctt tataggcatt taaaccggag ctgatagcca tattggtatc aataccgtgg
     5221 gtattttgca ccctgtcagt aatgctgcag aggtcgcaat cgccagcagt aatttagtat
     5281 tcttcatgtg aatcatccgt tgattaatca tatataaaca ttatgtatca acaacttaca
     5341 ttgacaagcg acgctaccat taatcaaaat gactcacaag gtccgaaaaa aaacgccgac
     5401 aatgtgccga cgttttgata aagaaagatt tggctattta ttgcccgttg ttcattcagg
     5461 ctgcctggct aatccgcgcc aactgctcga aataatccgg aaatgttttg gccgtacatt
     5521 tgggatcaag aatcgtcact ggtgtatctg acaacgccac cagcgagaaa cacatcgcca
     5581 tccggtgatc attgtatgtc gcgatctcgg caaagttcag tttttccggt ggagtgatac
     5641 gaatgtaatc gtgcccctct tctacttccg caccgacttt acgcagttct gttgccatcg
     5701 caaacaggcg atcggtttct ttaacacgcc agttatagat attgcgcagc gtggtggtgc
     5761 cttttgcaaa taacgccgcc gtggcaatgg tcatcgccgc atcgggaata tggttcatat
     5821 ccatatcaat agcgttcagt tcaccacgcg tgcaggaaat ataatcatcg ccccagcaaa
     5881 tggtcgcgcc cattttttcc agcacatcag caaagcgaat atcaccctgc atactgttac
     5941 gtccaatacc ggtcactttt acagtgccgc ctttgattgc tgctgctgcc agaaagtaag
     6001 aagccgaaga tgcatcgcct tcgaccaaat aagtacccgg agactgataa gactgtccgc
     6061 cttttacgac aaattgttga tagtgctgat tttcaatttc aacaccaaac gtcttcatca
     6121 gattgagtgt gatgtcgata taaggtttag aaaccagatc gcctttaata cgaatcaccg
     6181 tatcttccgg cgcaagaggc gcagtcatta acagtgcggt gaggaattgg ctggaaacgg
     6241 agccatcaac gtcaacgttg ccgccagtaa agccgccctg taaacgcaac ggcggataat
     6301 tttcttgttc caggtaagtg atcttcgccc cgcccaggcg cagcgcatcc accagatgac
     6361 caatcgggcg ttctttcata cgcggctcac cggtcagcac aatatcattg ctacccagac
     6421 aaagagctgc cgccagcgga cgcattgccg ttccggcgtt accgaggaac aactccaggg
     6481 caccttctgc gtgtaatgga ccgccgttac cgataatttc gcaacgcgta cgatcggctg
     6541 aaagcgtata gcttacccct aacgctgtta atgcattcag catatggcgc acgtcatcgc
     6601 tatccagcag attggttaat actgttttgc cgtgtgctaa tgccgccagc aataaagcgc
     6661 ggttagaaac gctcttggaa ccgggcagat taatagtgcc atcgacacga gcgatgggtt
     6721 gtaacgtcag ggattccatg aactcaactc tctacaacag aaataaaaac cccacaggct
     6781 ggctgtgggg attaagcaaa atttcggcat taaccgtgac ggcgttcgaa ctcaaccatg
     6841 aagtctgtca gcgctttaac gccttccagc ggcatggcgt tataaataga agcgcgcatt
     6901 ccgccgacca cacggtgacc tttcagtgca tgaaggccag cagcaaaaga ctcttcaagg
     6961 aacaatttgt caagcgcact gtccgccaac tggaacggca cgttcatccg cgaacggtta
     7021 gctttcgcca cgtcattgcg gtagaaatcg ctgttatcaa tcaccccata tagcagttct
     7081 gctttttgct gattgatttt atccatttca gctacaccgc cgttcgcttt cagccattta
     7141 aagaccagac cagatagata ccaggcaaat gtcggcggcg tgttaaacat ggagccgtta
     7201 tcgttgaaga tggaataatc cagtatcgac ggacacgcga tattcgcttt gcccagcaaa
     7261 tcttcacgaa cgatgacgat tgtcaggcca gccgggccga tatttttctg cgcgccagcg
     7321 taaatcacgc cataacggct gacgtcaatc ggacgggaaa gaatggttga agagaagtcg
     7381 gcggcgacca ccacatcttt gccgaagtct ggcgtttcgt cgatggcgat accgtcgatg
     7441 gtttcattcg ggcagtaatg catataagca gcattatcag agagttgcca ttcacgcatt
     7501 ggcttaaccg cgcgcagacc atcaacagtc actttggcgt caaagacatt aggcgtgcag
     7561 tattttttcg cttctttaat ggcagttgcc gcccagtaac cggcatcaac ataatctgcg
     7621 gtggttttat caccgagaat attcagcggt accgcagcaa actgaccgcg accaccgcca
     7681 tggcagaata ataccttgta gttggagggg acattaagaa gatcgcgaaa atccttctcg
     7741 gcttcctctg caacctgaat gaactctttg ccacggtgac tcacttccat caccgacgta
     7801 ccaagaccgt tccagtcgcg cagttcctgt tgagcctgtt taagcacctc tgccggtagc
     7861 attgccggac cagaactaaa attgaagatt tgagccattt cccctcacca cgttgcgttg
     7921 ctattaaccc gcggtcaatc gattgcgacc acaggtaata cattattcct gtggctatcg
     7981 gttttatcat tcagtgacac acatcgcaat gagtaaaacc gttgagggca aaaatgtggc
     8041 ttgcatcaca caaaagaatc tctcggatta ttagcaaaaa gccgatgttt ttactgtcag
     8101 gtcacccgtt ttgcccgact tgccttcgtc cattctggat ttgcacagcg cggacataat
     8161 tgtttttccc ccgctttcat atgaatgatt tcactacaac gaatacaggc atagtccgcc
     8221 gactccggca ccactttgta acgctgcgta caatcactgg gtaaaataag taaacccggt
     8281 ttcaccttgt catcttcaaa gaaatagaca ctgatttgcc cgttggtttc gagaatcgcc
     8341 agacgtacct gccccagctg ctccacgcca cgcaatcgta gctccataaa gaactcaaat
     8401 tccgtcatgt tggagttatt gagtttcgac caggccagct cgccatcttc aataataaca
     8461 accggcttac cttccagtag atcttccagt ttttcactgt gcgccatcaa ccacattacc
     8521 aggcggtata acaacgccag agtgataaag acgataagta ccggcaccat cggcacatca
     8581 tcataaaacg ccacatctcc cgccgctgaa cccagcgtga gaatgattaa cacttcaaac
     8641 agcgacatct gtcgcacacc gcgtcttccg gtcattttga ggaacaaaaa aaccagtaca
     8701 aaggtataaa gactacgtag tgcaacttcg ccaaggaaat caaaaggcac tttatcaaat
     8761 gccatacggt ggagatcgaa cgccttcatt tttatgctct tatcgtggtt tattcgctaa
     8821 aagcatagtc aacagttcat cggcatagcg gcggtgatag cgcctttgag ataaaacccg
     8881 tattattgcg cgctttccgt acgactaaag tgattttcat gacgcaaaca tttatccccg
     8941 gcaaagatgc cgctctggaa gattccatcg ctcgcttcca gcaaaaaatt tcagacctcg
     9001 gctttcagat tgaagaggcc tcctggctga atcctgtgcc taacgtctgg tctgtacata
     9061 ttcgcgacaa agagtgcgca ctgtgtttta ccaacggtaa aggcgcaacc aaaaaagcgg
     9121 cgctggcttc tgcacttggt gaatatttcg agcgtctctc aaccaactac ttttttgctg
     9181 atttctggct gggcgaaacc atcgccaacg gtccgttcgt gcattatccc aacgaaaaat
     9241 ggttcccact gaccgaaaat gacgatgtgc cagaaggact actcgatgac cgtctgcgcg
     9301 cgttttatga tccggagaat gaactgaccg gcagcatgct gattgaccta caatccggta
     9361 acgaagatcg tggtatttgc ggcctgccgt ttacgcgtca gtccgacaat cagaccgttt
     9421 atattccgat gaatatcatt ggtaacctgt acgtctccaa cggtatgtcc gcaggtaata
     9481 cccgcaacga agcacgcgtt cagggattgt ctgaagtttt cgaacgctac gtgaaaaacc
     9541 gcattattgc tgaaagcatc agcctgccag agatcccggc agacgtgctg gcgcgttacc
     9601 cagcggtggt tgaagcgatc gaaacactgg aagcagaagg tttcccgatc ttcgcatatg
     9661 atggttccct tggcggccag tatccggtga tttgcgtggt actgttcaat cctgctaacg
     9721 gtacctgctt tgcctctttc ggtgcgcatc ctgattttgg cgtagcactg gaacgtaccg
     9781 tgaccgagct gctgcaaggt cgtggcctga aagatttgga tgtgtttact ccgccaacct
     9841 tcgatgatga agaagtcgct gaacatacca acctcgaaac gcactttatc gattccagcg
     9901 gtttaatctc ctgggacctg ttcaagcagg atgccgatta tccgtttgtg gactggaatt
     9961 tctccggcac cacggaagaa gagtttgcta cgctgatggc tatcttcaac aaagaagata
    10021 aagaagttta tattgccgat tacgagcatc tgggcgttta tgcttgccgt attatcgtgc
    10081 ctggcatgtc cgatatttat ccggctgaag atctgtggct cgcgaataac agtatgggca
    10141 gccatttacg tgaaacgatt ctttcgctac caggcagcga gtgggaaaaa gaagattacc
    10201 tgaacctcat cgagcaactg gatgaagaag gttttgatga ctttacccgc gtgcgtgagc
    10261 tgttgggtct ggcgaccggg tcggataacg gttggtacac cctgcgtatc ggtgaattaa
    10321 aagccatgct ggcgctggct ggtggcgatc tggaacaggc tctggtctgg accgaatgga
    10381 cgatggagtt taactcatca gtatttagtc cggaacgcgc caactattat cgctgcctgc
    10441 aaacgttgtt attactggca caggaagaag atcgccagcc gctgcaatat ctgaatgcgt
    10501 ttgttcgcat gtacggcgca gatgccgtgg aagccgccag tgcggcaatg agcggcgaag
    10561 cggcgtttta cggcctgcaa ccggtagata gcgatctgca cgcgtttgct gcacatcagt
    10621 cgttgttgaa ggcctacgaa aagctgcagc gcgccaaagc agcattctgg gcaaaataaa
    10681 atcaaatagc ctacgcaatg taggcttaat gattagtctg agttatatta cggggcgttt
    10741 ttctaatgcc ccgctttaca tatatttgca ttaataaaat aattgtaatt ataaggttaa
    10801 atatcggtaa tttgtattta ataaatacga tcgatattgt tactttattc gcctgatgct
    10861 cccttttaat taactatttt agcggaggat gcggaaaaaa ttcaactcat ttgttaattt
    10921 ttaaaattta tttttatttg gataatcaaa tatttactcc gtatttgcat aaaaaccatg
    10981 cgagttacgg gcctataagc caggcgagat atgatctata tcaatttctc atctataatg
    11041 ctttgttagt atctcatctc cgacttaata aagagagagt tagtgtgaaa gctgacaacc
    11101 cttttgatct tttacttcct gctgcaatgg ccaaagtggc cgaagaggcg ggtgtctata
    11161 aagcaacgaa acatccgctt aagactttct atctggcgat taccgccggt gttttcatct
    11221 caatcgcatt cgtcttctat atcacagcaa ccactggcac aggcacaatg cccttcggca
    11281 tggcaaaact ggttggcggc atttgcttct ctctggggct gattctttgt gttgtctgcg
    11341 gagccgatct ctttacttcc accgtgttga ttgttgttgc taaggcgagt gggcgcatca
    11401 cctggggtca gttggcgaaa aactggctaa atgtctattt tggcaacctg gtcggcgcac
    11461 tgctgtttgt acttttaatg tggctttccg gcgagtatat gaccgcaaat ggtcaatggg
    11521 gactaaacgt cctacaaacc gccgaccaca aagtgcacca tacttttatt gaggccgtct
    11581 gtcttggtat cctggcaaac ctgatggtat gtctggcagt atggatgagt tattctggcc
    11641 gcagcctgat ggacaaagcg ttcattatgg tgctgccggt cgcgatgttt gttgccagcg
    11701 gttttgagca cagtatcgca aacatgttta tgatcccgat gggtattgta atccgcgact
    11761 tcgcatctcc ggaattctgg accgctgtcg gttctgcacc ggaaaatttt tctcacctga
    11821 ccgtgatgaa cttcatcact gataacctga tcccggttac gatcggtaat attatcggcg
    11881 gtggtttgtt ggttgggttg acatactggg tcatttacct gcgtgaaaac gatcaccatt
    11941 aatggttgtc gaagtacgca gtaaataaaa aatccactta agaaggtagg tgttacatgt
    12001 ccgagcttaa tgaaaagtta gccacagcct gggaaggttt taccaaaggt gactggcaga
    12061 atgaagtaaa cgtccgtgac ttcattcaga aaaactacac tccgtacgag ggtgacgagt
    12121 ccttcctagc tggcgctact gaagcgacca ccaccctgtg ggacaaagta atggaaggcg
    12181 ttaaactgga aaaccgcact cacgcgccag ttgactttga caccgctgtt gcttccacca
    12241 tcacctctca cgacgcaggc tacatcaaca agcagcttga gaaaatcgtt ggtctgcaga
    12301 ctgaagctcc gctgaaacgt gctcttatcc cgttcggtgg tatcaaaatg atcgaaggtt
    12361 cctgcaaagc gtacaaccgc gaactggatc cgatgatcaa aaaaatcttc actgaatacc
    12421 gtaaaactca caaccagggc gtgttcgacg tttacactcc ggacatcctg cgttgccgta
    12481 aatctggtgt tctgaccggt ctgccagatg catatggccg tggccgtatc atcggtgact
    12541 accgtcgcgt tgcgctgtac ggtatcgact acctgatgaa agacaaactg gcacagttca
    12601 cttctctgca ggctgatctg gaaaacggcg taaacctgga acagactatc cgtctgcgcg
    12661 aagaaatcgc tgaacagcac cgcgctctgg gtcagatgaa agaaatggct gcgaaatacg
    12721 gctacgacat ctctggtccg gctaccaacg ctcaggaagc tatccagtgg acttacttcg
    12781 gctacctggc tgctgttaag tctcagaacg gtgctgcaat gtccttcggt cgtacctcca
    12841 ccttcctgga tgtgtacatc gaacgtgacc tgaaagctgg caagatcacc gaacaagaag
    12901 cgcaggaaat ggttgaccac ctggtcatga aactgcgtat ggttcgcttc ctgcgtactc
    12961 cggaatacga tgaactgttc tctggcgacc cgatctgggc aaccgaatct atcggtggta
    13021 tgggcctcga cggtcgtacc ctggttacca aaaacagctt ccgtttcctg aacaccctgt
    13081 acaccatggg tccgtctccg gaaccgaaca tgaccattct gtggtctgaa aaactgccgc
    13141 tgaacttcaa gaaattcgcc gctaaagtgt ccatcgacac ctcttctctg cagtatgaga
    13201 acgatgacct gatgcgtccg gacttcaaca acgatgacta tgctatcgct tgctgcgtaa
    13261 gcccgatgat cgttggtaaa caaatgcagt tcttcggtgc gcgtgcaaac ctggcgaaaa
    13321 ccatgctgta cgcaatcaac ggcggcgttg acgaaaaact gaaaatgcag gttggtccga
    13381 agtctgaacc gatcaaaggc gatctcctga actacgatga agtgatggag cgcatggatc
    13441 acttcatgga ctggctggct aaacagtaca tcactgcact gaacatcatc cactacatgc
    13501 acgacaagta cagctacgaa gcctctctga tggcgctgca cgaccgtgac gttatccgca
    13561 ccatggcgtg tggtatcgct ggtctgtccg ttgctgctga ctccctgtct gcaatcaaat
    13621 atgcgaaagt taaaccgatt cgtgacgaag acggtctggc tatcgacttc gaaatcgaag
    13681 gcgaataccc gcagtttggt aacaatgatc cgcgtgtaga tgacctggct gttgacctgg
    13741 tagaacgttt catgaagaaa attcagaaac tgcacaccta ccgtgacgct atcccgactc
    13801 agtctgttct gaccatcact tctaacgttg tgtatggtaa gaaaactggt aacaccccag
    13861 acggtcgtcg tgctggcgcg ccgttcggac cgggtgctaa cccgatgcac ggtcgtgacc
    13921 agaaaggtgc tgtagcgtct ctgacttccg ttgctaaact gccgtttgct tacgctaaag
    13981 atggtatctc ctacaccttc tctatcgttc cgaacgcact gggtaaagac gacgaagttc
    14041 gtaagaccaa cctggctggt ctgatggatg gttacttcca ccacgaagca tccatcgaag
    14101 gtggtcagca cctgaacgtt aacgtgatga accgtgaaat gctgctcgac gcgatggaaa
    14161 acccggaaaa atatccgcag ctgaccatcc gtgtatctgg ctacgcagta cgtttcaact
    14221 cgctgactaa agaacagcag caggacgtta ttactcgtac cttcactcaa tctatgtaat
    14281 tagatttgac tgaaatcgta cagtaaaaag cgtacaataa aggctccacg aaagtggggc
    14341 cttttttagc acgagagcct tttttgtcag ctatctatac tttaaggtga ctgccaaaac
    14401 agactcgacg tagccttcga gctgcgcacc aacacggcct cagatgggcc acatctggag
    14461 aaacaccgca atgtcagtta ttggtcgcat tcactccttt gaatcctgtg gaaccgtaga
    14521 cggcccgggt attcgcttta tcaccttttt ccagggctgc ctgatgcgct gcctgtattg
    14581 tcataaccgc gacacctggg acacgcatgg cggtaaagaa gttaccgttg aagatttgat
    14641 gaaggaagtg gtgacctatc gccactttat gaacgcttcc ggcggcggcg ttaccgcatc
    14701 cggcggtgaa gcaatcctgc aagctgagtt tgttcgtgac tggttccgcg cctgcaaaaa
    14761 agaaggcatt catacctgtc tggacaccaa cggttttgtt cgtcgttacg atccggtgat
    14821 tgatgaactg ctggaagtaa ccgacctggt aatgctcgat ctcaaacaga tgaacgacga
    14881 gatccaccaa aatctggttg gagtttccaa ccaccgcacg ctggagttcg ccaaatatct
    14941 ggcgaacaaa aatgtgaagg tgtggatccg ctacgttgtt gtcccaggct ggtctgacga
    15001 tgacgattca gcgcatcgcc tcggtgaatt tacccgtgat atgggcaacg ttgagaaaat
    15061 cgaactcctc ccctaccacg agctgggcaa acacaaatgg gtggcaatgg gtgaagagta
    15121 caaactcgac ggtgttaaac cacctaagaa agagaccatg gaacgcgtga aaggcattct
    15181 tgagcagtac ggtcataagg taatgttcta atttccccgt aaagcggcaa ctttattgag
    15241 ttgccgcttt tttattccgc gcttcattct gctacagtgt ttttaacaca ttttatagtg
    15301 catctaccat atcccgtacc tgagataata acgactgata atagctcgca tgaagttctt
    15361 ccccatcgaa taccactgta ttacacaaga aagtgacatc ggcatcttca ataccaagat
    15421 aactgcacat atttttcaaa taatcgctta tatttttttc ccagcccatc tggacaa
//
LOCUS       DADMHC010000085        15428 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.085, whole genome shotgun sequence.
ACCESSION   DADMHC010000085 DADMHC010000000
VERSION     DADMHC010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15428)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15428)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15428
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.085"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(3..350)
                     /locus_tag="JNZ57_002231"
     CDS             complement(3..350)
                     /locus_tag="JNZ57_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707676.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbL family protein"
                     /protein_id="HAY8828441.1"
                     /translation="MMKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVA
                     LKTDAETEKLVTDINAERKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGIN
                     GKWVRKLVMTPTY"
     gene            complement(355..540)
                     /locus_tag="JNZ57_002232"
     CDS             complement(355..540)
                     /locus_tag="JNZ57_002232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnbE family lipoprotein"
                     /protein_id="HAY8828442.1"
                     /translation="MKILLAALTSSFMLAACTPRIEVAAPKEPITINMNVKIEHEIII
                     KADKDVEELLETRSDLY"
     gene            complement(537..3176)
                     /locus_tag="JNZ57_002233"
     CDS             complement(537..3176)
                     /locus_tag="JNZ57_002233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbH family protein"
                     /protein_id="HAY8828443.1"
                     /translation="MLGKYKAVLALLLLIILVPLTLLMTLGLWVPTLAGIWLPLGTRI
                     ALDESPRITRKGLIIPDLRYLVGDCQLAHITNASLSHPSRWLLNVGTVEFDSACLAKL
                     PQTEQSPAAPKTLAQWQSMLPNTWINIDKLIFSPWQEWQGKLSLALTSDIQQLRYQGE
                     KVKFQGQLKGQQLTVSELDVIAFEYQPPVKLVGEFTMPLVPDGLPVSGHATATLNLPQ
                     EPSLVDAELDWQENSGQLIVLARDNGDPLLDLPWQITRQQLTVSDGRWSWPYAGFPLS
                     GRLGVKVDNWQAGLENALISGRLSVLTQGQAGKGNAVLNFGPGKLSMDNSQLPLQLTG
                     EAKQADLILYARLPAQLSGSLTDPTLAFEPGALLRSKGRVIDSLDIDEIRWPLAGVKV
                     TQRGVDGRLQAILQAHENELGDFVLHMDGLANDFLPDAGRWQWRYWGKGSFTPMNATW
                     DVAGKGEWHDSTITLTDLSTGFDQLQYGTMTVEKPRLILDKPVVWVRDAQHPSFSGAL
                     SLDAGQTLFTGGSVLPPSTLKFSVDGRDPTYFLFKGDLHAGEIGPVRVNGRWDGIRLR
                     GNAWWPKQSLTVFQPLVPPDWKMNLRDGELYAQVAFSAAPEQGFRAGGHGVLKGGSAW
                     MPDNQVNGVDFVLPFRFADGAWHLGTRGPVTLRIAEVINLVTAKNITADLQGRYPWTE
                     EEPLLLTDVSVDVLGGNVLMKQLRMPQHDPALLRLNNLSSSELVSAVNPKQFAMSGAF
                     SGALPLWLNNEKWIVKDGWLANSGPMTLRLDKDTADAVVKDNMTAGSAINWLRYMEIS
                     RSSTNINLDNLGLLTMQANITGTSRVDGKSGTVNLNYHHEENIFTLWRSLRFGDNLQA
                     WLEQNARLPGNDCPQGKECEEKQ"
     gene            3384..4373
                     /gene="ldhA"
                     /locus_tag="JNZ57_002234"
     CDS             3384..4373
                     /gene="ldhA"
                     /locus_tag="JNZ57_002234"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HAY8828444.1"
                     /translation="MKLAVYSTKQYDKKYLQQVNESFGFELEFFDFLLTEKTAKTANG
                     CEAVCIFVNDDGSRPVLEELKKHGVKYIALRCAGFNNVDLDAAKELGLKVVRVPAYDP
                     EAVAEHAIGMMMTLNRRIHRAYQRTRDANFSLEGLTGFTMYGKTAGVIGTGKIGVAML
                     RILKGFGMRLLAFDPYPSAAALELGVEYVDLPTLFSESDVISLHCPLTPENYHLLNEA
                     AFDQMKNGVMIVNTSRGALIDSQAAIEALKNQKIGSLGMDVYENERDLFFEDKSNDVI
                     QDDVFRRLSACHNVLFTGHQAFLTAEALTSISQTTLQNLSNLEKGETCPNELV"
     gene            4484..4906
                     /gene="hslJ"
                     /locus_tag="JNZ57_002235"
     CDS             4484..4906
                     /gene="hslJ"
                     /locus_tag="JNZ57_002235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HslJ"
                     /protein_id="HAY8828445.1"
                     /translation="MKKVAAFVALSLLMAGCVSNDKIAVTPEQLQHHRFVLESVNGKP
                     VTSDKNPPEISFGEKMMISGSMCNRFSGEGKLSNGELTAKGLAMTRMMCANPQLNELD
                     NTISEMLKEGAQVDLTANQLTLATAKQTLTYKLADLMN"
     gene            complement(4903..5169)
                     /locus_tag="JNZ57_002236"
     CDS             complement(4903..5169)
                     /locus_tag="JNZ57_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015964583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HAY8828446.1"
                     /translation="MRAAFWVGCAALLLSACSSEPVQQATAAHVAPGLKASMSSSGEA
                     NCAMIGGSLSVARQLDGTAIGMCALPNGKRCSEQSLAAGSCGSY"
     gene            5443..8967
                     /gene="nifJ"
                     /locus_tag="JNZ57_002237"
     CDS             5443..8967
                     /gene="nifJ"
                     /locus_tag="JNZ57_002237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HAY8828447.1"
                     /translation="MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGL
                     KNVWGDTPRVVEMQSEAGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTP
                     FVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLCAANVQEAQDFALISHIATLKSR
                     VPFIHFFDGFRTSHEINKIVPLADDTILDLMPQAEIDAHRARALNPEHPVIRGTSANP
                     DTYFQSREATNPWYNAVYDHVEQAMNDFSAATGRQYQPFEYYGHPQAERVIILMGSAI
                     GTCEEVVDELLTRGEKVGVLKVRLYRPFSAKHLLQTLPGSVRSVAVLDRTKEPGAQAE
                     PLYLDVMTALAEAFNNGKRETLPRVIGGRYGLSSKEFGPDCVLAVFAELNAAKPKARF
                     TVGIYDDVTNLSLPLPENTQPNSAKLEALFYGLGSDGSVSATKNNIKIIGNSTPWYAQ
                     GYFVYDSKKAGGLTVSHLRVSEQPIRSAYLISQADFVGCHQLQFIDKYQMAERLKPGG
                     TFLLNTPYSADEVWSRLPQEVQAVLNQKKARFYVINAAKIARECGLAARINTVMQMAF
                     FHLTQILPGDSALAELQGAIAKSYSSKGQDLVEGNWQALALARESVEEVPLQPVNPHS
                     ANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALPPDGTWPMGTTRWEKRNIAEEIP
                     IWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPASLHSLDVKSRDMRGQKYVLQV
                     APEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKINYDFFLNLPEIDRSKL
                     ERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRMLIANATGCSSIYGGNLP
                     STPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRLLDQFADKIPAELLT
                     ALKSDATPEVRREQIAALRQQLNDVAEAHELLRDADALVEKSIWLIGGDGWAYDIGFG
                     GLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRKARKDLGVSMM
                     MYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLALSHDQMRQL
                     TATGFWPLYRFDPRRADEGKLPLALDSRPPSEALEETLLHEQRFRRLNSQQPEVAEQL
                     WKDAAADLQKRYDFLAQMAGKAEKSNTD"
     gene            9333..10466
                     /gene="ompN"
                     /locus_tag="JNZ57_002238"
     CDS             9333..10466
                     /gene="ompN"
                     /locus_tag="JNZ57_002238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpN"
                     /protein_id="HAY8828448.1"
                     /translation="MKSKVLALLIPALLAAGAAHAAEVYNKDGNKLDLYGKVDGLHYF
                     SDNSAKDGDQSYARLGFKGETQINDQLTGYGQWEYNIQANNTESSKNQSWTRLAFAGL
                     KFADYGSFDYGRNYGVMYDIEGWTDMLPEFGGDSYTNADNFMTGRANGVATYRNTDFF
                     GLVNGLNFAVQYQGNNEGASNGQEGTNNGRDVRHENGDGWGFSTTYDLGMGFSAGAAY
                     TSSDRTNDQVNHTAAGGDKADAWTAGLKYDANNIYLATMYSETRNMTPFGDSDYAVAN
                     KTQNFEVTAQYQFDFGLRPAVSFLMSKGRDLHAAGGADNPAGVDDKDLVKYADVGATY
                     YFNKNMSTYVDYKINLLDEDDSFYAANGISTDDIVALGLVYQF"
     gene            10607..11041
                     /gene="uspF"
                     /locus_tag="JNZ57_002239"
     CDS             10607..11041
                     /gene="uspF"
                     /locus_tag="JNZ57_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310024.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspF"
                     /protein_id="HAY8828449.1"
                     /translation="MNRTILVPIDISDSELTQRVISHVEAEAKIDDAEVHFLTVIPSL
                     PYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILEL
                     AKKIPAHMIIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR"
     gene            11622..12512
                     /gene="sitA"
                     /locus_tag="JNZ57_002240"
     CDS             11622..12512
                     /gene="sitA"
                     /locus_tag="JNZ57_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707262.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter substrate-binding
                     protein SitA"
                     /protein_id="HAY8828450.1"
                     /translation="MLLGCLALTCSIAFQASATEKFKVITTFTIIADMAKNVAGDAAE
                     VSSITKPGAEIHEYQPTPGDIKRAQGAQLILANGMNLELWFQRFYQHLNGVPEVIVSS
                     GVTPVGITEGPYEGKPNPHAWMSPDNALIYVDNIRDALIKYDPANAQTYQRNADTYKA
                     KITQTLAPLRKQITELPENQRWIVTSEGAFSYLARDLGLKELYLWPINADQQGTPQQV
                     RKVVDIVKKNHIPAVFSESTISDKPARQVARETGAHYGGVLYVDSLSTENGPVPTYID
                     LLKVTTSTLVQGIKAGKREK"
     gene            12512..13339
                     /gene="sitB"
                     /locus_tag="JNZ57_002241"
     CDS             12512..13339
                     /gene="sitB"
                     /locus_tag="JNZ57_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter ATP-binding
                     protein SitB"
                     /protein_id="HAY8828451.1"
                     /translation="MMQSAGIVVNDVTVTWRNGHTALRDASFTVPSGSIAALVGVNGS
                     GKSTLFKAIMGFVRLTSGKISVLGIPTRQALQKNLVAYVPQSEEVDWSFPVLVEDVVM
                     MGRYGYMGMLRIAKKRDRQIVTDALERVDMVDFRHRQIGELSGGQKKRVFLARAIAQQ
                     GDVILLDEPFTGVDVKTEAKIISLLRELRAEGKTMLVSTHNLGSVTTFCDYTVMVKGT
                     VLASGPTDTTFTAENLELAFSGVLRHVTLNGSEESIITDDERPFVAHRPSAVQREAR"
     gene            13336..14193
                     /gene="sitC"
                     /locus_tag="JNZ57_002242"
     CDS             13336..14193
                     /gene="sitC"
                     /locus_tag="JNZ57_002242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter permease subunit
                     SitC"
                     /protein_id="HAY8828452.1"
                     /translation="MNVLLEPFSYEYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGD
                     ALSHSIVPGVAGAYMLGLPFSLGAFFSGGLAAGSMLFLNQRTRLKEDAIIGLIFSSFF
                     GLGLFMVSLNPTSVNIQTIVLGNILAIDPADILQLTIIGILSIIVLFFKWKDLMVTFF
                     DENHARAIGLHPGRLKILFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFP
                     RLLIIAVTIGSVTSFLGAWVSYFLDGATGGIIVVAQTLLFLLAFVFAPTHGLLANRRR
                     AHKALEDRS"
     gene            14190..15047
                     /gene="sitD"
                     /locus_tag="JNZ57_002243"
     CDS             14190..15047
                     /gene="sitD"
                     /locus_tag="JNZ57_002243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter permease subunit
                     SitD"
                     /protein_id="HAY8828453.1"
                     /translation="MMALLLEPLQFTFMSHALLISLVVSIPCALLSVFLVLKGWALMG
                     DAMSHAVFPGIVLTWILGLPLATGAFVAGVFCAVATGYLKDNSRIKQDTVMGIVFSGM
                     FAAGLILYIAIKPDVHLDHILFGDMLGITIGDIIQTVIIAGLVTLVISVKWRDFLLFS
                     FDYQQAQVSGLHTRWLHYGLLCMVSLTIVATLKAVGIILSISLLIAPGAIAVLLTQRF
                     HIALLLATGISVIVSMTGVWLSFFIDSAPAPTIVVLFAVVFIMTFTVTSINARTKGNA
                     HTQDLLSPN"
BASE COUNT         3882 a         3873 c         3733 g         3940 t
ORIGIN      
        1 tatcagtaag ttggagtcat taccaatttt cgtacccatt taccgtttat cccttgtaca
       61 tattcccccg gtttggcccg agctacgagc ttttgcccgg cgagtttcgc gatatcatct
      121 acagacacat tattttgctt tgccagttgt tggtaactcg ctttacgttc ggcattaatg
      181 tcggttacta atttctctgt ttcagcatcc gttttcagcg caaccagata accataaaat
      241 gtttccccga cccgcccctg cgttctggct tcatccagag tcaatgccat tacattgctg
      301 cttaccagcc caacaagaaa cgcacaaaga agtaatgttt tcttcatcat cgcctcagta
      361 aagatcgcta cgagtttcaa gcagctcttc gacatctttg tctgccttga tgatgatctc
      421 atgctcaatt ttaacgttca tattgatagt gatcggttcc ttgggcgcag cgacttcaat
      481 acgcggcgta caggcagcca gcataaaaga tgacgtcaac gcagccagta aaattttcat
      541 tgtttttcct cacactcttt tccttgcgga cagtcatttc ccggcagacg tgcgttctgc
      601 tccaaccatg cctggagatt atcgccaaag cgtaaactgc gccacagcgt aaaaatattc
      661 tcttcatgat ggtaattaag gtttaccgta ccgcttttac catcaacgcg actggtacct
      721 gtaatgttgg cctgcatggt taataaaccg agattatcta aattaatatt tgtcgatgaa
      781 cggctaattt ccatatagcg caaccagtta attgctgaac ccgcagtcat attgtctttc
      841 accaccgcat ctgcggtgtc tttatccagc cgcaaggtca ttggcccgct atttgccagc
      901 caaccatctt tcactatcca tttttcgttg tttagccata acggcaatgc accactaaat
      961 gccccggaca tggcgaattg tttcggattg acggcgctaa ccagttcgct ggatgagaga
     1021 ttattcagcc gcaacagcgc cgggtcatgt tgcggcatac gtaattgttt catcagtacg
     1081 ttaccgccta acacatcgac gctaacatca gtcaacagca agggttcttc ttcagtccac
     1141 ggataacgcc cttgcaaatc agccgtaata tttttcgctg tcaccagatt aatcacttcg
     1201 gcaattcgca acgtaacggg gccgcgagtc cccagatgcc aggctccatc ggcaaaacgg
     1261 aaaggcagga caaaatcgac accgttaacc tgattatctg gcatccaggc actaccgcct
     1321 ttcaacacgc cgtgccctcc cgcgcggaat ccttgttcag gcgcagcaga aaatgcaacc
     1381 tgagcataca gttcaccatc gcgtaagttc atcttccagt cgggtggcac cagcggctgg
     1441 aatacagtca gtgattgttt tggccaccag gcgttaccgc gcagacgaat accgtcccag
     1501 cgaccattta cccgaaccgg gccaatctca ccagcatgta aatcgccttt aaagaggaaa
     1561 tacgtcggat cgcgcccatc gacgctaaat tttaaggttg atggcggtaa cacactgccg
     1621 ccagtgaaca gcgtttgccc ggcgtccagt gacagcgcgc cgctgaagga gggatgctgt
     1681 gcgtcacgta cccagacgac gggcttgtcc agaattaatc gcggcttttc taccgtcatc
     1741 gtaccgtatt gtaactggtc gaaaccggtg gagaggtcgg tcagcgtaat cgtgctgtca
     1801 tgccattcac cttttcctgc gacatcccag gtggcattca tcggtgtaaa actgcctttt
     1861 ccccagtagc gccactgcca gcggcccgcg tcagggagaa aatcattcgc cagcccatcc
     1921 atatgcagca cgaaatcgcc cagttcattt tcatgcgcct gcaaaatggc ctgcaaacgt
     1981 ccgtcaacac cacgttgggt gacttttaca cccgctaaag gccagcggat ttcatcgatg
     2041 tccagcgaat cgatgactct tccctttgaa cgaagtaacg cgcctggctc aaaggccagc
     2101 gttgggtcag tcagacttcc acttagctgc gcgggtaagc gggcatataa aatgaggtcc
     2161 gcctgtttcg cttcaccggt cagctgcaga ggcagctggc tgttatccat gcttaatttt
     2221 cctgggccaa aatttagcac cgcgttacct ttacccgctt gcccctgggt cagcacactc
     2281 agtcgtccgc tgatcagagc gttctcaagc cctgcctgcc agttgtcgac tttgacaccc
     2341 agtcggccac tcaaaggaaa acctgcatac ggccaactcc agcgaccatc gcttacggtc
     2401 aattgttgac gagtaatttg ccacggcaaa tcgagcaacg gatcgccgtt atcacgtgcc
     2461 agcacaatca attgcccgct attttcctgc cagtccagct ctgcatccac cagtgacggt
     2521 tcctgcggca agtttaacgt cgcagtagca tgcccactta caggaagtcc atccggcacg
     2581 agcggcatag taaattcccc caccagttta accggcggct gatattcaaa cgcgatgaca
     2641 tccagttcgc tgactgtaag ttgttgccct ttcagctggc cttgaaattt aactttttcg
     2701 ccctgataac gcagttgctg gatatcagag gttaatgcga gagagagttt tccctgccat
     2761 tcctgccagg gagaaaaaat cagtttatcg atattgatcc aggtgttagg cagcatggac
     2821 tgccactgcg cgagggtttt tggagcagct ggcgattgct ccgtctgcgg caatttcgcc
     2881 agacaagcag aatcaaattc taccgtgccg acgttcaata accagcggct gggatgtgaa
     2941 aggctggcgt tggtgatatg cgcaagctga caatctccca ccagataacg gagatcggga
     3001 atgattaaac ctttacgcgt aatgcgtggg ctttcatcta atgcaatacg tgtcccgagc
     3061 ggtagccaga tgcccgccag cgtgggaacc cacagcccga gcgtcatcag cagcgtcaac
     3121 ggcacaagaa taatcagtaa taacagcgcg agaacggctt tatatttacc cagcatgggt
     3181 agttaatatc ctgatttagc gaaaaattaa gcattcaata cgggtattgt ggcatgttta
     3241 accgttcagt tgaaggttgc gcctacacta agcatagttg ttgatgaatt tttcaatatc
     3301 gccatggttt tcaattatat ttgaaatttt gtaaaatatt tttagtggct taaatgtgat
     3361 tcaacatcac tggagaaagt cttatgaaac tcgccgttta tagcacaaaa cagtacgaca
     3421 agaagtacct gcaacaggtg aacgagtcct ttggctttga gctggaattt tttgactttc
     3481 tgctgacgga aaaaaccgct aaaactgcca atggctgcga agcggtatgt attttcgtaa
     3541 acgatgacgg cagccgcccg gtgctggaag agctgaaaaa gcacggcgtt aaatatatcg
     3601 ccctgcgctg tgccggtttc aataacgtcg accttgatgc ggcaaaagaa ctggggctga
     3661 aagtagtccg tgttccagcc tatgatccag aggccgttgc tgaacacgcc atcggtatga
     3721 tgatgacgct gaaccgccgt attcaccgcg cgtatcagcg tacccgtgac gctaacttct
     3781 ctctggaagg tctgaccggc tttactatgt atggcaaaac ggcaggcgtt atcggtaccg
     3841 gtaaaatcgg tgtggcgatg ctgcgcattc tgaaaggttt tggtatgcgt ctgctggcgt
     3901 tcgatccgta tccaagtgca gcggcgctgg aactcggtgt ggagtatgtc gatctgccaa
     3961 ccctgttctc tgaatcagac gttatctctc tgcactgccc gctgacaccg gaaaactacc
     4021 atctgttgaa cgaagccgcc ttcgatcaga tgaaaaatgg cgtgatgatc gtcaatacca
     4081 gtcgcggtgc attgattgat tctcaggcag caattgaagc gctgaaaaat cagaaaattg
     4141 gttcgttggg tatggacgtg tatgagaacg aacgcgatct gttctttgaa gataaatcca
     4201 acgacgtgat ccaggatgac gtattccgtc gcctgtctgc ctgccacaac gtgctgttta
     4261 ccgggcacca ggcattcctg acagcagaag ctctgaccag tatttctcag actacgctgc
     4321 aaaacttaag caatctggaa aaaggcgaaa cctgcccgaa cgaactggtt taatgttgca
     4381 gctcccctgc aatccagggg agctgattca gataatcccc aatgaccttt cattctctat
     4441 tcttaaaata gtcctgagtc agaaactgta attgagaacc acaatgaaga aagtagccgc
     4501 gtttgttgcg ctaagcctgc tgatggcggg atgtgtaagt aatgacaaaa ttgctgttac
     4561 gccagaacag ctacagcatc atcgctttgt gctggaaagc gtaaacggta agcccgtgac
     4621 cagcgataaa aatccgccag aaatcagctt tggtgaaaaa atgatgattt ccggcagcat
     4681 gtgtaaccgc tttagcggtg aaggcaaact gtctaatggt gaactgacag ccaaagggct
     4741 ggcaatgacc cgtatgatgt gcgctaaccc gcagcttaat gaactcgata acaccattag
     4801 cgaaatgctg aaagaaggtg cacaagtgga tctgaccgcg aaccagttaa cgctggcgac
     4861 cgcgaaacag acattaactt ataagctggc ggatttaatg aattaatagc tgccacagct
     4921 cccggcggca agtgactgtt cgctacagcg tttgccgttg ggtaatgcac acatcccaat
     4981 cgccgtgcca tccagttgac gggcaacaga aagcgaaccg ccgatcattg cacaatttgc
     5041 ttctccacta ctggacatcg acgcttttaa acctggcgct acgtgcgccg cagtcgcctg
     5101 ctgaacaggt tcactactac acgccgacaa caataaagcg gcacacccta cccaaaacgc
     5161 tgctcgcatc ttttcttcct ctgatcttca agccaaacga caccgccata aataataggc
     5221 agcacagagg gcgacatcga gagctgtcct gcgcgttgcc ccgcattttt acttttttat
     5281 ggctattttt ttgccctctg tttgatcaaa acattcatta cgctgatgtg ggggacacaa
     5341 aagcgaaaat gcagaagaaa gccatttgct aaaattgaaa gattactact gggcgcgcag
     5401 caatttcgtg cgcccctcat ttgcgcaatg taagggtgtc atatgattac tattgacggt
     5461 aatggcgcgg ttgcttcggt ggcgtttcgc accagtgaag ttatcgccat ctaccctatt
     5521 acccccagtt ccacgatggc agaacaggct gatgcctggg ccggaaacgg cttgaagaac
     5581 gtttggggag acacaccacg cgtggttgaa atgcagtcgg aagcgggtgc tatcgctacc
     5641 gtgcatggcg ctttgcagac gggtgccctt tcaacatcgt ttacgtcatc gcagggtttg
     5701 ctgctgatga tcccgacact gtacaaactg gcaggcgaac tcacaccgtt tgtcctgcat
     5761 gtagcggcac gtaccgttgc cacacatgca ctctctattt ttggcgatca ttccgacgtc
     5821 atggcggtgc gccagacggg ttgcgcgatg ttgtgtgcgg caaacgtcca ggaagcgcaa
     5881 gactttgctc tcatttcgca catcgcgacg ctgaaaagcc gcgtgccatt tattcatttc
     5941 tttgatggtt tccgcacgtc ccacgaaatc aataaaattg tcccgctggc cgatgacacg
     6001 attcttgatc tcatgccgca ggccgaaatt gatgctcatc gcgcccgggc gctcaacccg
     6061 gaacatccgg tgatccgtgg tacgtccgcc aatcctgaca cttatttcca gtctcgcgaa
     6121 gccaccaacc cctggtacaa cgcagtctat gaccatgttg aacaggcgat gaatgatttc
     6181 tctgccgcga caggtcgtca gtatcagccg tttgaatatt acgggcatcc gcaagctgaa
     6241 cgggtgatta tcctgatggg ctcagccatt ggcacctgtg aagaagtggt tgatgaattg
     6301 ctaacccgtg gcgaaaaagt cggcgtgctg aaagttcgcc tgtaccgccc cttctcagcc
     6361 aaacacttgc tacaaactct accgggatcc gtacgcagcg tggcggtact ggacagaacc
     6421 aaagaacccg gtgcccaggc agaaccgctc tatctggatg tgatgaccgc actggcagaa
     6481 gcctttaata atggcaagcg cgaaactctg ccccgtgtca ttggtgggcg ctatggtctt
     6541 tcatccaaag aatttggccc ggactgtgta ctggcggtat ttgccgagct caacgcggct
     6601 aaaccgaaag cgcgctttac ggttggtatt tacgatgatg taaccaatct gtccctgccg
     6661 ttgccggaaa acacccagcc aaactcggcg aaacttgaag ccttgtttta tggccttggt
     6721 agtgatggca gcgtttccgc gaccaaaaac aatatcaaga ttatcggtaa ttccacgccg
     6781 tggtacgcac agggctattt tgtttacgac tccaaaaaag cgggcggcct gacggtttct
     6841 caccttcgcg tgagcgaaca gccgattcgt tccgcttatc tcatttccca ggctgatttt
     6901 gttggctgcc accagttgca gtttatcgat aaatatcaga tggctgagcg tttaaaacct
     6961 ggcggcactt tcctgctcaa cacgccgtac agcgcagatg aagtgtggtc gcgcttgccg
     7021 caagaagttc aggccgtgtt aaaccagaaa aaagcgcgct tctatgtgat taacgcggcg
     7081 aaaatcgccc gcgaatgtgg cctggcggcc cgtattaata ccgtcatgca gatggctttt
     7141 ttccatctga cgcaaattct gcctggcgat agcgccctcg cagaattgca gggtgcgatt
     7201 gccaaaagtt acagtagcaa aggccaggat ctggtggaag gcaactggca ggctctggcg
     7261 ctggcgcgtg aatccgtaga agaagttccg ttgcaaccgg taaatccgca cagcgccaat
     7321 cgaccgccag tggtttccga tgccgcccct gatttcgtga aaaccgtaac cgcagcgatg
     7381 ctcgcagggc ttggtgatgc cctccccgtt tcggcgctgc cgccagacgg cacctggccg
     7441 atggggacca ctcgctggga aaaacgcaat atcgccgaag agatccccat ctggaaagag
     7501 gaactctgta cccaatgtaa ccactgcgtc gccgcttgcc cacactcagc tattcgcgca
     7561 aaagtggtac cacccgaagc gatggaaaac gcccctgcca gcctgcattc gctggatgtg
     7621 aaatcgcgtg atatgcgcgg gcagaaatat gtcttgcagg tggctccgga agattgcacc
     7681 ggttgtaacc tgtgcgtcga agtttgcccg gcgaaagacc gtcagaatcc agagattaaa
     7741 gccatcaata tgatgtcgcg cctggaacat gtcgaagaag agaaaatcaa ttacgatttc
     7801 ttcctcaacc tgccagaaat cgaccgtagc aaactggaac gtattgatat tcgtacatcg
     7861 cagctgatta caccgctgtt tgaatattcc ggtgcttgct ccggttgtgg cgagacgccg
     7921 tatattaaat tgctgactca gctctatggc gaccggatgt tgatcgctaa cgccaccggc
     7981 tgttcttcaa tttatggcgg taacctgccc tctacaccgt ataccaccga tgccaacggt
     8041 cgtgggccgg catgggcgaa ctctctattt gaagataatg ccgaatttgg ccttggtttc
     8101 cgcctgacgg tcgatcaaca ccgtgtccgc gtgctgcgtc tgctggatca atttgccgat
     8161 aaaatcccgg cggaattact gacggcgttg aaatcagacg ctacgccaga ggttcgtcga
     8221 gaacagatcg cagctttacg ccagcaactc aacgatgttg ccgaagcaca tgaactgcta
     8281 cgtgatgcag atgcactggt ggaaaaatca atctggctga ttggtggtga tggctgggct
     8341 tacgatatcg gctttggcgg tctggatcat gtattgagtt tgacggaaaa cgtcaacatt
     8401 ctggtgctgg atacgcaatg ctattccaac accggtggtc aggcgtcgaa agcgacaccg
     8461 ctgggtgcag taactaaatt tggcgagcac ggcaaacgta aagcgcgtaa agatcttggc
     8521 gtcagtatga tgatgtacgg tcatgtttat gtggcgcaga tttctctcgg cgcgcagctg
     8581 aaccagacgg tgaaagcgat tcaggaagcg gaagcgtatc cgggaccatc gctgatcatt
     8641 gcttatagcc cgtgtgaaga gcatggttac gatctggcac tcagccatga ccagatgcgc
     8701 caactcacag ctaccggctt ctggccgcta tatcgcttcg atcctcgtcg tgccgatgaa
     8761 ggcaaactgc cgctggcgct ggattcacgc ccgccgtcag aagcactgga agaaacgtta
     8821 cttcacgagc aacgtttccg tcgtctgaat tcgcagcagc cagaagtggc agaacagtta
     8881 tggaaagatg ctgcagctga tttgcaaaaa cgctatgact tcctggcaca aatggccgga
     8941 aaagcggaaa aaagcaacac cgattaaatg ctctggataa ggattatcca attctaaaaa
     9001 aaagcccgga cgactgttcg ggcttgtctt tttatatgtt ggaaaatcag tggcaatgca
     9061 atggcccaac agaaaataaa atctgtgaca ataaaggcat ataacccgcg cagaataacg
     9121 tatagaaaat taaaagtata atttttattt tgtatgtatt atcttcgata cattcaccag
     9181 acttattatc atttcagaag aattatttga ttaaggtttt acttaaggcg taacaaatga
     9241 tatttatcgg ctaactgaac ttctccttta ggatgttttc actccccgga atggggataa
     9301 aaggcaaata aaataactaa aggatttatt caatgaaaag caaagtactg gcacttttaa
     9361 ttcctgccct gctcgccgca ggtgctgcac atgcagccga agtttataat aaagacggca
     9421 acaaattaga tctgtatggc aaagttgatg gcctgcatta tttttctgat aattcagcga
     9481 aagatggcga tcagagctat gcgcgtctgg gttttaaagg cgaaacccaa attaacgatc
     9541 aactcactgg ctacggtcaa tgggaataca atattcaggc aaacaacact gaatcttcaa
     9601 aaaaccagtc atggacccgt ctggcatttg ccgggctgaa atttgcagat tacggttctt
     9661 tcgattacgg acgtaattat ggcgtaatgt acgacatcga aggctggaca gatatgctgc
     9721 ctgaatttgg cggtgactct tataccaatg cagacaactt tatgactggt cgagccaatg
     9781 gcgtcgcgac ttatcgtaat actgatttct tcggtctggt aaatggtctg aacttcgcgg
     9841 tgcagtatca aggtaacaac gaaggagcca gtaatggtca ggaaggcacc aacaacggac
     9901 gtgatgttcg ccatgaaaac ggtgacggct ggggtttttc cacaacatat gatttaggca
     9961 tgggctttag cgctggtgcg gcatacacct cttctgaccg caccaatgac caggttaacc
    10021 atactgcggc gggtggtgat aaagcagacg cgtggactgc tgggctaaaa tacgatgcta
    10081 acaatattta cctggcaacc atgtattcag aaacgcgtaa tatgaccccg tttggcgaca
    10141 gcgattatgc tgtggcaaac aaaacccaga attttgaagt cactgcccag taccagtttg
    10201 attttggtct gcgtccggca gtctctttcc tgatgtctaa aggccgtgac ctgcacgctg
    10261 ccggtggtgc agacaacccg gcaggtgttg atgataaaga tctggttaaa tacgccgatg
    10321 ttggcgcgac ttactatttc aataaaaaca tgtccaccta cgttgactat aaaatcaacc
    10381 tgttggatga agatgacagc ttctacgctg ccaatggcat ctctaccgat gatattgtcg
    10441 ctttaggtct ggtttatcag ttctaaatcc tcctgcccgc tgttatggcg ggctttttct
    10501 gcttattctt cctcctttga tctaaattaa aaatgtgaac tccatcatta cacaaaaagt
    10561 gtcatctggc gttacacttt atgcggatac taaaacagga ggttttatga acagaacgat
    10621 tcttgtccct atcgatattt ccgattcaga attaactcaa cgcgtgatta gccacgttga
    10681 ggcagaggca aagattgacg atgcagaggt tcatttcctg acggtaatac cttcactgcc
    10741 ctactatgcc tctctgggtt tagcgtattc cgcagaatta ccggcaatgg atgacctgaa
    10801 agcggaagcc aaatcgcaac tggaagagat cattaaaaaa tttaaactgc caaccgacag
    10861 agtgcatgtc catgttgagg aaggctcgcc caaagaccgc attctggaat tggcgaagaa
    10921 gatccccgct catatgatca tcattgcttc ccatcgaccg gatatcacca cttatctgct
    10981 cggttccaac gccgcagctg tagtgcgtca cgcagagtgc tccgtgctgg ttgtgcgctg
    11041 acactaacgc ccgcacattg ctgcgggctt tttgattcat ttcgcaaatg tgctgacatt
    11101 ttcccctcta atccgtacca tacacgccac tgtttttata tcagatttct tatgctgggc
    11161 attccggcat gacgcatact cttctgatgc catataacga attgagtcgc ttttaaatgt
    11221 cgcaaaatca agaaattagt aagaaagaac aatacaacct gaacaagtaa gggcaaaaat
    11281 cacaactatc tgactcataa gtattttatt tatttttcaa tatgttaaac attatcagcg
    11341 acaacaataa gctacgataa cccactcttt ttttgcccca tttttgccat caacaatttt
    11401 cctcataaag tcatttcaaa gcctaatagc tgctctactt ttttcctcaa tatcatgtcg
    11461 ccagtaggaa acaacctaat ccctgtttta ggcctcaaag ctgttaatga taattatttt
    11521 cattttgtat aggttatgct ataaaacata gctgttgcta tgtttgttct aattttgctc
    11581 actataggta ctaaattatg cactcaataa aaaaagtaac catgctcttg gggtgcctcg
    11641 ccctcacctg ctcgatcgca tttcaggcaa gtgcaactga aaaattcaag gtcattacaa
    11701 catttaccat catcgcggat atggccaaaa acgtggctgg agatgctgca gaagtctcat
    11761 ccataaccaa gcctggtgca gaaattcatg agtatcagcc tacccctggc gatattaaac
    11821 gtgcacaggg ggcacaactg attctcgcca atggtatgaa tctggaattg tggttccaac
    11881 gcttttacca gcatctcaat ggggttccag aagtaattgt ctcttcgggt gtgacgccag
    11941 tagggatcac cgaaggaccc tatgagggca aacctaatcc ccatgcatgg atgtcgccag
    12001 ataatgctct gatttacgtc gataatattc gtgatgcgtt gataaaatac gatccggcaa
    12061 atgcacaaac ctaccaacgt aatgccgata cttataaagc caagattacc caaacccttg
    12121 cccccctgcg taagcagatt acggaactcc ctgagaatca gcgatggatt gtcaccagtg
    12181 aaggggcttt ttcttatctc gcacgcgatt tggggctaaa agagctttat ctgtggccga
    12241 ttaatgccga tcaacaagga acaccgcagc aggtacgtaa ggttgttgat atagttaaga
    12301 aaaatcatat cccggcagtc tttagcgaga gtacgatttc cgataaacca gcgcgtcagg
    12361 ttgcgcgtga aaccggcgca cactacggcg gtgtgctcta tgtcgattcc ctgagcacag
    12421 aaaacggccc ggtacctacg tatatcgacc ttcttaaggt tactaccagt acgctggtac
    12481 agggaattaa agccgggaaa agggagaaat aatgatgcaa tctgcaggca ttgtcgttaa
    12541 tgatgttact gtcacctggc gtaacgggca cacagcactg cgcgatgcat ccttcacagt
    12601 accaagtgga tctattgccg ctctggttgg ggtaaacggt tccggaaaat cgacgttgtt
    12661 taaagcgatt atgggatttg tgcgtctgac cagcggaaag atatctgttc tgggtattcc
    12721 cacgcgacag gcgctacaga aaaacctggt tgcctacgtc cctcagtcag aagaggttga
    12781 ctggtcgttt cctgtactgg tggaagatgt ggtgatgatg ggccgctatg ggtatatggg
    12841 tatgttgcgt atagccaaaa agagggatcg tcagattgtc accgatgcgc tggaacgtgt
    12901 cgatatggtg gattttcgcc atcgtcaaat cggcgagctt tccggtggac aaaagaaacg
    12961 cgtctttctg gcgagagcga ttgcacagca gggtgatgtg atcctgctgg atgaaccttt
    13021 taccggcgtt gatgtgaaaa ccgaagcgaa aatcatcagc ctgttgaggg agttacgcgc
    13081 ggaaggcaaa acgatgcttg tctcaacgca caatctcggc tcagtcacga cattttgcga
    13141 ttatacggtc atggtcaaag gcaccgtcct ggcaagcggg ccgacagaca ccacttttac
    13201 agccgagaac ctggagctgg cttttagcgg cgtactgcgc catgtcacac ttaacggctc
    13261 ggaagaaagc attattactg acgatgaacg cccttttgtg gcacatcgac cgtcagcggt
    13321 gcagagggaa gcaagatgaa cgtgctactg gaacccttca gctatgaata tatgctcaat
    13381 gcgatgtggg tctcggcaat ggtcggcggt ctctgcgctt tcctgtcatg ctatctgatg
    13441 ctaaaaggct ggtcgctgat tggcgatgcg ctgtcgcact ctattgtccc gggtgttgcg
    13501 ggggcatata tgctggggct tccgttttct ctgggagcct tcttttccgg cggactggca
    13561 gcgggcagca tgctgtttct taaccaacgc acccgcttaa aagaagatgc catcatcggc
    13621 ctgatcttct cgtccttttt tggcctgggg ctgtttatgg tgtcattgaa cccgacatcc
    13681 gtgaacattc agaccatcgt cctgggcaat attctggcaa tcgatccggc ggatatcctg
    13741 caactcacta tcattggcat tctctcgatc atcgtgcttt ttttcaaatg gaaagatctt
    13801 atggtgacct ttttcgacga gaatcacgcc cgtgctattg gattacatcc gggcagatta
    13861 aaaatcctct tcttcaccct gctgtcggtt tcgaccgttg cggcgctgca aacggttggt
    13921 gcctttctgg tgatctgtct ggtggtgact cccggtgcaa cagcatggtt gttaaccgat
    13981 cgttttcccc gcctgctcat aattgctgta actattggca gtgtaaccag tttcctcggc
    14041 gcgtgggtca gttactttct ggacggcgcg acaggtggaa tcatcgtggt ggcgcagaca
    14101 ctgctgtttc ttttagcatt tgtatttgcg cccacccatg gacttttggc aaatcgtcgg
    14161 cgtgcgcata aagcgctgga ggatcgctca tgatggcatt attactggag ccactgcagt
    14221 tcacctttat gagtcacgca ctgctgattt cactggtagt ttccataccc tgtgcgctgc
    14281 tgtcggtctt tctggtcctg aaaggttggg cactgatggg tgacgcgatg agtcatgcgg
    14341 tttttcctgg catcgtgctt acctggattc tggggttacc tctggctaca ggggcattcg
    14401 tcgccggagt attctgcgcg gtggcgacgg gatacctgaa agacaacagc cgaatcaagc
    14461 aagatacagt tatggggatt gttttttctg gcatgtttgc cgcaggtctg atcttgtata
    14521 ttgcaatcaa accagacgta catcttgacc atattctttt cggcgacatg ctcgggataa
    14581 ccatcggcga tataatccag acggtgatta ttgccgggct ggttacactt gttattagcg
    14641 taaaatggcg ggattttttg ctgttcagct ttgattatca acaggcgcag gtaagcggtt
    14701 tgcatacgag atggctgcat tatgggctgc tgtgcatggt ttccctgacc attgtggcga
    14761 cgctgaaagc agtaggtatc attctctcta tttctctgct cattgcgcct ggcgccattg
    14821 cagtactcct gacacaacgc tttcatattg cgctcctact ggcgactggc atatcggtaa
    14881 tagtgtcaat gactggtgtc tggctgtcct tttttatcga cagcgcacca gctccgacga
    14941 ttgtcgtctt attcgcggtc gtgttcatca tgacgtttac cgttaccagc atcaacgcac
    15001 gcacaaaggg aaacgcccat acacaggatc tgttatcacc caattagcac aatatccgag
    15061 gacagcatcg tccgccagcc tacagaagtc cggaaagcca tggaaggtcg ttgggaggag
    15121 gtacgaattc tatcatgcaa aaaatacgta aaatcgataa cgcctagaaa tcattcaata
    15181 ctcgcactat cgaaagttta ccagccaacc gcggcacgtt cctgcatacg acgtgccgca
    15241 gcttctgtta ttccacgata aaattcctaa ccgaattcaa atccttcaga ctattcagct
    15301 cttccttcag ctcccgctga cggcgataaa tcgtaagcgc cccgagaagt acgtagcgta
    15361 aggattattt tacagacgag aagttccagg gcagcagttc atgcacttgg ttcgacggcc
    15421 agtcattg
//
LOCUS       DADMHC010000086        15311 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.086, whole genome shotgun sequence.
ACCESSION   DADMHC010000086 DADMHC010000000
VERSION     DADMHC010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15311)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15311)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15311
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.086"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(76..4536)
                     /gene="mukB"
                     /locus_tag="JNZ57_002244"
     CDS             complement(76..4536)
                     /gene="mukB"
                     /locus_tag="JNZ57_002244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukB"
                     /protein_id="HAY8828454.1"
                     /translation="MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTM
                     AAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVV
                     GVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNERQARVLPLNELKDKLEAM
                     EGVQFKQFNSITDYHSLMFDLGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLR
                     DYLLPENSGVRKAFQDMEAALRENRMTLEAIRVTQSDRDLFKHLISEATNYVAADYMR
                     HANERRVHLDKALEFRRELHTSRQQLAAEQYKHVDMARELAEHNGAEGDLEADYQAAS
                     DHLNLVQTALRQQEKIERYEADLDELQIRLEEQNEVVAEAIERQEENEARAEAAELEV
                     DELKSQLADYQQALDVQQTRAIQYNQAIAALNRAKELCHLPDLTADSAAEWLETFQAK
                     ELEATEKMLSLEQKMSMAQTAHSQFEQAYQLVVAINGPLARNEAWDVARELLREGVDQ
                     RHLAEQVQPLRMRLSELEQRLREQQEAERLLADFCKRQGKNFDIDELEALHQELEARI
                     ASLSDSVSNAREERMALRQEQEQLQSRIQSLMQRAPVWLAAQNSLNQLSEQCGEEFTS
                     SQDVTEYLQQLLEREREAIVERDEVGARKNAVDEEIERLSQPGGSEDQRLNALAERFG
                     GVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQVTEHLDGLTDCPEDLYLIEGD
                     PQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGRAARESRIESLHAEREVLS
                     ERFATLSFDVQKTQRLHQAFSRFIGSHLAVVFESDPEAEIRQLNSRRVELERALSNHE
                     NDNQQQRIQFEQAKEGVTALNRILPRLNLLADDSLADRVDEIRERLDEAQEAARFVQQ
                     FGNQLAKLEPIVSVLQSDPEQFEQLKEDYAYSQQMQRDARQQAFALTEVVQRRAHFSY
                     SDSAEMLSGNSDLNEKLRERLEQAEAERTRAREALRGHAAQLSQYNQVLASLKSSYDT
                     KKDLLNDLQRELQDIGVRADSGAEERARIRRDELHAQLSNNRSRRNQLEKALTFCEAE
                     MDNLTRKLRKLERDYFEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAYLSADDL
                     RSMSDKALGALRLAVADNEHLRDVLRMSEDPKRPERKIQFFVAAYQHLRERIRQDIIR
                     TDDPVEAIEQMEIELSRLTEELTSREQKLVISSRSVANIIRKTIQREQNRIRMLNQGL
                     QNVSFGQVNSVRLNVNVRETHAMLLDVLSEQHEQHQDLFNSNRLTFSEALAKLYQRLN
                     PQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSIL
                     VMVVQSWEDESRRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPE
                     NISPEKGTTYKLVRKVFQNTEHVHVVGLRGFAPQLPETLPGTDEAPSQAS"
     gene            complement(4536..5240)
                     /gene="mukE"
                     /locus_tag="JNZ57_002245"
     CDS             complement(4536..5240)
                     /gene="mukE"
                     /locus_tag="JNZ57_002245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415443.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukE"
                     /protein_id="HAY8828455.1"
                     /translation="MSSTNIEQVMPVKLAQALANPLFPALDSALRSGRHIGLDELDNH
                     AFLMDFQEYLEEFYARYNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYL
                     YLSPERLANEGIFTQQELYDELLTLADEAKLLKLVNNRSTGSDVDRQKLQEKVRSSLN
                     RLRRLGMVWFMGHDSSKFRITESVFRFGADVRAGDDPREAQRRLIRDGEAMPIENHLQ
                     LNDETEENQPDSGEEE"
     gene            complement(5221..6543)
                     /gene="mukF"
                     /locus_tag="JNZ57_002246"
     CDS             complement(5221..6543)
                     /gene="mukF"
                     /locus_tag="JNZ57_002246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukF"
                     /protein_id="HAY8828456.1"
                     /translation="MSEFSQTVPELVAWARKNDFSISLPVDRLSFLLAVATLNGERLD
                     GEMSEGELVDAFRHVSDAFEQTSETIGVRANNAINDMVRQRLLNRFTSEQAEGNAIYR
                     LTPLGIGITDYYIRQREFSTLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPL
                     KYSVAEIFDSIDLTQRLMDEQQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLREL
                     QDTLEAAGDKLQANLLRIQDATMPHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIG
                     YDRHVHKFIRTAIDMDKNRVFAQRLRQSVQTYFDEPWALTYANADRLLDMRDEEMALR
                     DEEVTGELPEDLEYEEFNEIREQLAAIIEEQLAVYKTRQVPLDLGLVVREYLSQYPRA
                     RHFDVARIVIDQAVRLGVAQADFTGLPAKWQPINDYGAKVQAHVIDKY"
     gene            complement(6540..7325)
                     /gene="cmoM"
                     /locus_tag="JNZ57_002247"
     CDS             complement(6540..7325)
                     /gene="cmoM"
                     /locus_tag="JNZ57_002247"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine 5-oxyacetic acid(34)
                     methyltransferase CmoM"
                     /protein_id="HAY8828457.1"
                     /translation="MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQ
                     KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAA
                     QDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNM
                     VAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREK
                     HQQRDCYEALLELETRYCRQEPYITLGRYIHVTARKPQSKDKV"
     gene            7461..8240
                     /gene="elyC"
                     /locus_tag="JNZ57_002248"
     CDS             7461..8240
                     /gene="elyC"
                     /locus_tag="JNZ57_002248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706838.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope biogenesis factor ElyC"
                     /protein_id="HAY8828458.1"
                     /translation="MLFTLKKVIGNMLLPLPLMLLIIGAGLALLWFSRFQKTAKIFIS
                     IGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNPQWAPSSNLI
                     NNSLPRLNEGIRLWRENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLD
                     LPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPL
                     NPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGPSGEPRQE"
     gene            complement(8217..9110)
                     /locus_tag="JNZ57_002249"
     CDS             complement(8217..9110)
                     /locus_tag="JNZ57_002249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbJ family phosphotransferase"
                     /protein_id="HAY8828459.1"
                     /translation="MEQLRAELSHLLGEKLSRIECVNEKADTALWALYDSQGNPMPLM
                     ARSFSTPGKARQLAWKTTMLARSGTVRMPTIYGVMTHEEHPGPDVLLLERMRGVSVEA
                     PARTPERWEQLKDQIVEALLAWHRQDSRGCVGAVDNTQENFWPSWYRQHVEVLWTTLN
                     QFNNTGLTMQDKRILFRTRECLPALFEGFNDNCVLIHGNFCLRSMLKDSRSDQLLAMV
                     GPGLMLWAPREYELFRLMDNSLAEDLLWSYLQRAPVAESFIWRRWLYVLWDEVAQLVN
                     TGRFSRRNFDLASKSLLPWLA"
     gene            complement(9264..10010)
                     /gene="kdsB"
                     /locus_tag="JNZ57_002250"
     CDS             complement(9264..10010)
                     /gene="kdsB"
                     /locus_tag="JNZ57_002250"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HAY8828460.1"
                     /translation="MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGAER
                     IIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEP
                     MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATI
                     PWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQASPLEHIEMLEQLRVLWYG
                     EKIHVAVAQEVPGTGVDTPEDLERVRAEMR"
     gene            complement(10007..10189)
                     /locus_tag="JNZ57_002251"
     CDS             complement(10007..10189)
                     /locus_tag="JNZ57_002251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YcaR"
                     /protein_id="HAY8828461.1"
                     /translation="MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPV
                     LLETEARVLTADESKS"
     gene            complement(10241..11473)
                     /locus_tag="JNZ57_002252"
     CDS             complement(10241..11473)
                     /locus_tag="JNZ57_002252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HAY8828462.1"
                     /translation="MSLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISSMSLL
                     QIDTINIVARSPYLVLFSRLGNYPAQWLDESLARGELMEYWAHEACFMPRSDFRLIRH
                     RMLAPEKMGWKYKDAWMQEHEAEIAQLIQHIHDKGPVRSADFEHPRKGASGWWEWKPH
                     KRHLEGLFTAGKVMVIERRNFQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARS
                     LGIFREQWLADYYRLKRPALAAWREARAEQQQIIAVHVEKLGNLWLHADLLPLLERAL
                     AGKLTATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQ
                     LVGRMDAKMHRQTGILEVISLWLQEGIKPTTMLQKGLRQAITDFASWQQATRVTLGRC
                     PQGLFTDCRTGWEIDPVA"
     gene            complement(11510..12496)
                     /gene="lpxK"
                     /locus_tag="JNZ57_002253"
     CDS             complement(11510..12496)
                     /gene="lpxK"
                     /locus_tag="JNZ57_002253"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HAY8828463.1"
                     /translation="MIEKIWSGESPLWRLLLPLSWLYGLVSGAIRLCYKLKLKRAWRA
                     PVPVVVVGNLTAGGNGKTPVVVWLVEQLQQRGIRVGVVSRGYGSKAESYPLLLSADTT
                     TAQAGDEPVLIYQRTDAPVAVSPVRSDAVKAILAQHPDVQIIVTDDGLQHYRLARDVE
                     IVVIDGVRRFGNGWWLPAGPMRERAGRLKSVDAVIVNGGVPRSGEIPMHLLPGQAVNL
                     RTGTRCDVAQLEHVVAMAGIGHPPRFFATLKMCGVQPEKCVPLADHQSLNHADVSALV
                     SAGQTLVMTEKDAVKCRAFAEENWWYLPVDAQLSGDEPAKLLTQLTSLASGN"
     gene            complement(12493..14241)
                     /gene="msbA"
                     /locus_tag="JNZ57_002254"
     CDS             complement(12493..14241)
                     /gene="msbA"
                     /locus_tag="JNZ57_002254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A ABC transporter ATP-binding
                     protein/permease MsbA"
                     /protein_id="HAY8828464.1"
                     /translation="MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFM
                     LSLLKPLLDDGFGKTDRSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRR
                     RLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMM
                     FYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVL
                     IFGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVM
                     DSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRV
                     IERATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRF
                     YDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQI
                     EEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEAT
                     SALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLL
                     EHRGVYAQLHKMQFGQ"
     gene            complement(14278..>15311)
                     /locus_tag="JNZ57_002255"
     CDS             complement(14278..>15311)
                     /locus_tag="JNZ57_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309023.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HAY8828465.1"
                     /translation="VHLSGPLILEQGLWFLADRSLALLFWGLKSLPEGWINIAERWQW
                     LSFSPWFLLVVWRLNVWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVYMLDVGQGLAMV
                     IARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEGVILSHEHLDHRGGLDSILH
                     TWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSVHWPLQASNDKGNNHSCVVKVYDGT
                     NSILLTGDIEVPAEQKMLSRYWQQVQTTLLQVPHHGSNTSSSLPLIQRVNGKVALASA
                     SRYNAWRLPSNKVKHRYQQQGYQWLDTPHQGQVTVNFSAQGWRISSLREQILPRWYHQ
                     WFGVPVDNG"
BASE COUNT         3616 a         4315 c         3766 g         3614 t
ORIGIN      
        1 cgttatgtgc cattttttta gtgcagaaac ggagttttcg gaaaaagaaa aggcggcatt
       61 gctgccgcct taattttaac tcgcctgaga aggcgcttcg tcagttcctg gaagcgtttc
      121 agggagttgc ggcgcaaatc ctcgcaggcc gacgacatga acatgttcgg tattctggaa
      181 gactttacgc accagtttat aggtggtgcc tttctccggg ctgatatttt ccggcgctgc
      241 gatgatgagc tgcatttgta aacgctcaca caattcaaac agcgtggcga tagaacgagc
      301 atccagtcgc gctgcttcat cgaggaacag cagacggcaa ggagagatat ctttaccgcg
      361 caggcggcga gattcatctt cccagctttg taccaccatc accagaatcg acataccggt
      421 accaatcgcc tcaccggtcg acaatgcacc agactctgcg cgcaaccaac catcggaacc
      481 acggttaacc tcaacttcca tttccagata gttgcggtaa tccagcagtt cttcgccaat
      541 ggtctgcggc gtgcgctgcc ccatatcaat ctgcggatta agacgctgat acaatttcgc
      601 caacgcttcc gagaaggtca gacggttgct gttaaacaga tcctgatgct gctcgtgctg
      661 ttcagagagc acatccagca gcatggcgtg cgtttcacgc acgttcacgt tgaggcgcac
      721 gctgttcacc tgaccaaacg atacgttctg caacccctgg ttgagcatac ggatacggtt
      781 ctgctcgcgc tgaatggttt tgcgaatgat gttcgccacg ctgcgggaac tgatcaccag
      841 tttctgttca cgggaggtta attcttcggt cagacggcta agttcgatct ccatctgttc
      901 gatagcttcc accggatcat cggtacgaat aatatcctga cgaatacgtt cacgcagatg
      961 ctgataagcc gccacgaaga actgaatttt acgctccgga cgtttcggat cttccgacat
     1021 gcgcagcacg tcgcgcagat gttcgttatc cgccaccgcc agacgcagcg cacccaatgc
     1081 cttatccgac atagagcgca aatcatcagc ggagagataa gccagctcac gacggtgtaa
     1141 gcggcgctca acgccgttat ctttcaccat gcgcatcacc gcacaccagc ccgctttggc
     1201 ggtcactacc tgctcgcgca tctcaaagta atcccgctcc agcttgcgca gtttgcgggt
     1261 caggttgtcc atctccgctt cgcagaaggt aagcgctttt tccagttgat tgcggcgtga
     1321 acggttattg ctcagttgcg catgcagctc gtcacggcga atacgcgccc gctcttctgc
     1381 cccgctatca gcacgcacgc cgatatcctg caattcacgt tgcagatcgt tgagtagatc
     1441 ttttttggtg tcgtaagaac ttttcagcga agccagcacc tggttgtact gactcaactg
     1501 cgctgcgtga ccgcgcaacg cttcgcgagc gcgggtacgc tccgcttccg cctgttccag
     1561 acgttcacgc agtttttcgt tgagatcgct gttaccgcta agcatttctg ccgagtcaga
     1621 gtagctaaag tgcgcacgac gctgcaccac ttccgtcagg gcaaacgcct gctgacgggc
     1681 atcgcgctgc atctgttgag agtacgcgta atcttctttt aactgttcga actgttccgg
     1741 gtcgctctgc aataccgaaa cgatcggttc cagtttcgcc agttgattgc caaactgctg
     1801 aacaaaacgc gcggcttcct gggcttcatc cagacgttcg cggatttcat cgacgcgatc
     1861 cgccaggcta tcatcagcca acaggttgag acgcggcaga atgcggttca gcgccgtaac
     1921 gccctctttc gcctgctcaa actgaatacg ctgctgctgg ttatcatttt catgattact
     1981 taacgcccgc tccagttcga cgcgacggct gttcagttga cggatttctg cttccgggtc
     2041 agactcaaac acaaccgcca gatgactgcc gataaagcgg ctgaacgcct gatgcagacg
     2101 ctgagttttc tgtacatcaa aggagagcgt ggcgaagcgt tcggaaagca cttcacgctc
     2161 ggcatggagg ctttcaatac ggctttcacg cgcagcacga ccaaacagcg gcacttccgg
     2221 gaaacgtgaa taacgccact gacgatcggc gattttcacc actaccgctt tttccagctc
     2281 atcaacgctg aacacgctgt catcgaatga ctgcggatct ccttcgatca gatagagatc
     2341 ttccgggcaa tcggtcaagc catccaggtg ttcagttacc tgtgacagat ctggcaccac
     2401 gatggcgtgg cgtgacgggc catacagcgc tgagaagtac ggcgcatctt ccaggctaac
     2461 gtcgtcataa atttctgaca gcagcacacc accaaaacgc tccgccagcg cgttcagacg
     2521 ctgatcttca gagccgccag gctggcttaa acgttcgatc tcttcatcga cggcgttttt
     2581 gcgcgcgccc acttcatcgc gttcaacaat cgcctctcgc tcacgctcca gcaactgttg
     2641 cagatattcg gtgacgtcct ggctggaggt aaactcttcg ccgcactgtt cgctcaactg
     2701 gttgagactg ttttgcgctg ccagccaaac cggcgcacgc tgcatcaaac tctgaatgcg
     2761 agactgcagc tgttcctgct cctggcgcag tgccatgcgc tcttcacggg cgttagacac
     2821 gctatcggaa agagaggcaa tgcgtgcttc cagttcctga tgcagggctt ccagttcgtc
     2881 gatatcaaaa ttcttgccct gacgtttgca gaaatctgcc agcagacgct cagcttcttg
     2941 ctgctcgcgt agacgctgtt ccagttcgct taatcgcatc cgcagcggct gaacctgctc
     3001 tgccaggtga cgctgatcga ccccttcgcg caatagttcg cgagcgacat cccacgcctc
     3061 gttacgcgcc agtgggccgt tgattgccac caccagctga taagcctgct caaactggct
     3121 gtgcgcggtt tgcgccatgc tcattttctg ctcaagagag agcatttttt cagtcgcttc
     3181 cagctctttc gcctggaagg tttccagcca ttcggcggcg ctgtcggcgg ttaagtccgg
     3241 cagatggcac agttctttgg cacgattaag cgcagcaatc gcctggttat actggatcgc
     3301 gcgcgtttgc tggacgtcca gcgcctgctg gtagtcagca agctggcttt tcagctcgtc
     3361 cacttccagt tcggcagctt ccgcgcgagc ctcgttctct tcctggcgtt cgatggcttc
     3421 tgccaccact tcgttttgct cttccagacg gatctgcagc tcatcgagat ccgcttcgta
     3481 gcgttcgatc ttctcctgct gacgcagtgc ggtttgcacc aagttcaggt gatcgctggc
     3541 cgcctgataa tccgcttcca gatcgccttc ggcaccgttg tgctctgcca gctcacgcgc
     3601 catatcgacg tgtttgtact gctcagccgc cagttgctga cgcgaagtat gtaactcgcg
     3661 acgaaactcc agggctttgt cgagatggac acggcgctcg ttggcgtgac gcatgtagtc
     3721 cgccgccacg tagttggtag cttcgctgat cagatgctta aacaggtcac ggtccgactg
     3781 ggtgacacga atcgcttcca gcgtcatgcg gttttcacgc agcgccgctt ccatgtcctg
     3841 gaacgcttta cgcacgccgc tgttttccgg caacaggtag tcgcgcagag aacgggtaat
     3901 ggcactggag atcccgccat acagcgaagc ttcgatcaga cgatagaatt tgctacggtc
     3961 agatgcggag cgcagacgac gcgcgatgat gcccagatcg aacatcagcg agtggtaatc
     4021 ggtaatggag ttgaactgtt taaactgcac gccttccatc gcctcgagct tgtctttcag
     4081 ctcgttaagc ggcagcacgc gcgcctggcg ttcgttcagg gtttcggtca ccagctgtgt
     4141 cggctgcacc gacatcggca gtccctgaat ggcaaatggt ttgatatcca ctttacgatc
     4201 gcgtccggca acctgttgca gacgcacacc gaccaccacg cgctggtggc gcgagttaat
     4261 ggtgtcgagc atcgaataac agacacccgc tttcagctta ccgtgcagac ctttatcgcg
     4321 cgaaccgctg gtggccccgg cttccgtagt gttacggaaa tgcagcaggg tcaggtcggg
     4381 gatcagcgcc gtaacgaacg ccgccatggt ggtggattta cccgccccgt taccgccaga
     4441 aagcgtcgtg accagctcgt caaggtcaaa agttcgggca aaaaagccgt tccagttaat
     4501 cagcgtcagt gagcgaaatt taccgcgttc aatcattatt cttcctctcc gctatctggc
     4561 tgattctctt cggtttcatc gttgagttgc agatgatttt caatcggcat tgcttcgcca
     4621 tcacgaatca ggcgacgctg tgcttcacgg ggatcgtcgc cagcacgcac atcggctccg
     4681 aagcggaaca ccgattcggt aatgcgaaac ttgctgctgt cgtggcccat aaaccacacc
     4741 atgcctaaac gacgcagacg gttgagcgaa gaacgtactt tctcctgcaa cttctgacgg
     4801 tcaacgtctg aaccggttga acggttgttc accagtttca gcagttttgc ttcatcggcc
     4861 agggtgagca gttcgtcgta cagttcctgc tgggtgaaaa tcccctcatt cgccagccgt
     4921 tccgggctga gatagagata acagaggatt ttcccgacca tcatatccag ttccgacaag
     4981 acggaacgcg ggataagagt ggtggaacgt gggcgtaaat agaagaaccc ttccggtgcg
     5041 cgaataagct caacgttata acgcgcgtaa aactcttcca gatattcctg aaaatccatc
     5101 aggaatgcat gattatccag ttcgtcgagg ccaatatggc ggcctgaacg taaggcgctg
     5161 tccagcgccg gaaataacgg attcgccagc gcctgcgcca gcttaaccgg catcacttgt
     5221 tcaatatttg tcgatgacat gcgcctgtac cttggctccg taatcattaa tcggctgcca
     5281 tttcgctggc agtccggtga aatctgcttg cgctacgcca agacgtaccg cctgatcaat
     5341 aacaatacgc gcaacgtcaa agtgacgtgc acgcggatac tgtgacagat attcgcgtac
     5401 caccagacca agatccagcg gcacttgtct ggttttgtac acggcaagtt gttcttcgat
     5461 gatcgccgcc agctgttcgc ggatctcgtt aaactcttcg tattccagat cctcaggaag
     5521 ttccccagtc acttcttcat cgcgcagtgc catctcttcg tcacgcatat ccagcagacg
     5581 atcggcattg gcataagtta gcgcccacgg ctcatcaaaa taggtttgta ccgactgacg
     5641 taaccgctga gcaaagacgc ggtttttatc catatcgatc gcggtacgaa taaatttgtg
     5701 tacgtggcgg tcgtagccaa tccacaagtc gatggattgc tggccccaac tgataatacg
     5761 atcgagtttg ctctgcagat cgaacaccag acgatcgacg aaatgcagat cgtcatgggg
     5821 catcgtcgca tcctgaatgc gcaacagatt agcctgcaat ttgtcgcctg ccgcttccag
     5881 cgtatcctgc aattcacgca gcgttccgga agtttccgaa agcaacaatt cacagctgga
     5941 aatcgccgcc cgccagtctt tgttcagcaa ctgggcgata tcgtccttca cctgctgctg
     6001 ctgttcgtcc atcagacgtt gcgtcaggtc gatactgtcg aaaatttctg ctaccgaata
     6061 tttcagtggc gcatagacat tacggtgcca gtgaaattca tcaccgccct cttcggcggc
     6121 atctgctgcg cgtttgagct cacccgccac aatcgacaac tgcatagaaa gacgcagcgt
     6181 agaaaactcg cgctgacgga tgtagtagtc agtaatgccg atgccgagcg gcgtcagacg
     6241 gtaaattgcg ttcccttccg cctgctcgct ggtaaagcgg ttcagcagac gttgacgcac
     6301 catgtcgttg atcgcgttat tggcgcgcac gccgatggtt tcgctggttt gctcaaacgc
     6361 atcactcaca tggcggaatg catccaccag ctcgccttca ctcatctcac catccagacg
     6421 ctcgccgttc agcgtggcaa ccgccagcag aaaagagagt cggtctaccg gcagcgagat
     6481 ggagaagtca ttttttctgg cccaggcaac cagttcgggg actgtctggg aaaattcact
     6541 catactttat ccttgctctg cggtttgcgc gcggtgacat gaatataacg ccccagggta
     6601 atatacggtt cctgacggca ataacgcgtt tctaattcaa gtaatgcttc atagcagtcg
     6661 cgctgctggt gcttctcgcg cagataatca tgaaacacgc gaacgcctgt cttacccata
     6721 atttgccaac cagcttcttc cagccacaga taaacctgcg ccgggtcgcg tggataatct
     6781 ggcgaaagcg tccgtttttt ctttttcggc attcccgcct gcacgtaatc aaaattcccg
     6841 gcgaccatgt tatgcatcaa caaaccatgc gcattgtaga acattaacga caacacgccg
     6901 cctggacgca acactgacca cagggtctgc aatacactgc ggggatcggc cacccactcg
     6961 agcaccgcat ggaacaatat cagatcaacg ggcgtttcca aatgcgaagc aacatcctga
     7021 gcggcgcaat gtataaattg catgttgtcg ctcacacctt ttgcttctgc cgcctgtttt
     7081 gcgcggtcga tcatctgcgc agaaagatcg cataaaatga cctgatgccc acgctcggcc
     7141 attttgattg cggtctgccc ttctccaccg ccagcatcca gcacacgcag tttttgcggg
     7201 cccatttccg ccagcacgcg atcgagatcc tgccacagaa tagcctgtcg aagctgccct
     7261 ttggtggtgc cgtaaatgtt acgggaaaac ttttccgcaa tatcatcaaa attgcgatcc
     7321 tgcattgctt tctccaccgg ttggctaaga cgttttctga taaagacgct attttgtcac
     7381 agccacggcg agaatgaacc cgtctggtgt aatatcgctg gcgatccctt gctatatggt
     7441 taaaaaagga accagaaagg atgcttttta cactgaaaaa agtgattggc aatatgttgc
     7501 tgccacttcc gctgatgttg ttaattattg gcgctggcct ggcgctgctg tggtttagcc
     7561 gttttcaaaa aaccgcgaag atttttatta gcattgggtg gctggcactc ttgttattga
     7621 gtttgcaacc ggtagccgac cgcctgctgc gtcccatcga aagcacctat ccgacatgga
     7681 ataattcgca aaaagtggac tatatcgtgg tgctcggagg tggttatacc tggaacccgc
     7741 agtgggcacc gagctctaat ttaatcaata acagtctgcc acgcctgaat gaaggtattc
     7801 gcttatggcg cgaaaatccg ggatcaaaac tgatcttcac gggaggcgta gcaaaaacca
     7861 atacggtgag tacagcggaa gtaggtgcca gagttgcgca atcgctgggc gtgccgcgcg
     7921 agcaaattat caccctggat ttgccaaaag ataccgaaga agaagctgcg gcagtgaaac
     7981 aggcgattgg tgacgcccct ttcctgctgg tgacctccgc atcacatctg ccgcgggcga
     8041 tgatcttttt tcagcaggaa gggttaaatc cgctaccagc cccggcgaat cagttggcca
     8101 tcgactcgcc gcttaatccg tgggaacggg caatcccttc tccggtctgg ctgatgcata
     8161 gcgatcgtgt tggctatgaa acgcttggcc gcatctggca gtggctgaaa ggtccgtcag
     8221 gcgagccacg gcaagagtga ttttgatgcc agatcgaagt tgcgccgact aaatcgtccg
     8281 gtattaacca gttgcgcaac ttcatcccat aacacataca accaacgccg ccagatgaac
     8341 gactccgcca ctggcgcgcg ttgcaggtaa ctccagagca aatcttccgc cagagaatta
     8401 tccattagtc ggaacagttc gtattctcgc ggtgcccaaa gcattagtcc cggcccgacc
     8461 atcgccagta actgatcgct gcgcgaatct ttcagcatgc tgcgtaaaca gaagttaccg
     8521 tgaatcaaca cacaattgtc gttaaagcct tcaaataatg ccgggagaca ttcgcgagtg
     8581 cgaaacagga tccgcttatc ctgcatcgtc agaccggtgt tattgaactg attgagcgtg
     8641 gtccatagca cttcaacatg ttgccggtac catgagggcc agaaattttc ctgagtattg
     8701 tcgaccgcgc cgacgcaacc gcgactgtcc tgacggtgcc aggccagtaa ggcttcaacg
     8761 atttggtctt tgagctgttc ccagcgttct ggtgttcggg ctggtgcctc caccgaaaca
     8821 ccacgcatcc gctccagtag caggacatca gggccggggt gttcttcatg cgtcatcaca
     8881 ccataaatag tcggcatacg gacagtccca cttcttgcca gcatggtggt tttccatgcc
     8941 agttgtcggg cttttccggg cgtactaaag cttcttgcca ttaacggcat tgggtttccc
     9001 tggctgtcat acaaagccca caacgccgta tccgcttttt cattgacgca ctcaatacga
     9061 ctgagttttt cgcccagtaa atggcttaat tcggcacgca gctgttccat tcagattacc
     9121 ctcataaaag ctactgcttt cataatgagc gccaatataa aagatgtcac ctgaatgaga
     9181 tcaattgttg aaaagaaaaa ttgaggaaaa tcgtaacggt acgacactcc tcccaaaatt
     9241 ggctgaagtg tcgtgaagtg aaattagcgc atttcagcgc gaacgcgctc aagatcttca
     9301 ggggtatcca cacctgtgcc aggaacttcc tgagcaacag caacatggat tttttcgccg
     9361 taccacagaa cacgaagctg ctctaacatt tcgatgtgtt ctaacggact tgcctgccag
     9421 ttgacgtaac gacggataaa gcctgcacgg tagccataaa tgccaagatg acgcaggaag
     9481 ttatcgccaa cggtttcaag gccttctgca aaacgatcac gatcccaagg aatggtggcg
     9541 cgtgagaagt acagtgcata cccttcagcg tcgagaacca ctttcaccgc attcgggtta
     9601 aacgcttctt ccgcattgtg gattggcacc gccagagtcg ccatacccac ctgacgctga
     9661 gcgaggttat cagcaacctg acgaatgatt gtcgcaggga tcatcggttc atcaccctgc
     9721 acattaacga tcaccgtgtc gtcgctgaat gcgcattttt cgacaacttc cgccagacgt
     9781 tctgttcctg actgatgatc ggcgcgcgtc atacatactt caccgccagc ggcttcaacg
     9841 gcgcgggcaa catcctcatg atcggttgcc acgatgatgc gctcggcacc tgattcacgc
     9901 gcgcgttcaa gaacatgaac aatcatgggt ttgccgttaa tatcaaccaa tggtttaccg
     9961 ggcagacgcg tggacgcgta gcgcgcggga ataatgacca caaaactcat gatttactct
    10021 catcagcagt cagcacgcgg gcttccgttt ccagcaacac tggaatgcca tcgcggagcg
    10081 ggaaagccag gttatccagt ttgcaaataa gctcttgttt ttcctggtta taccaaagtt
    10141 ttccgttgca aaccgggcag gcaatgattt caagcaaacg atgatccata gttcctccag
    10201 atggatcggg ttatgaatgc ataaatctta tcataatcat ttatgcgacg gggtctattt
    10261 cccagccagt gcggcaatca gtaaagagac cttgcgggca gcgtcctaat gtcacccgcg
    10321 ttgcctgctg ccagctcgcg aaatcagtaa tcgcctgacg taaccctttt tgcagcattg
    10381 tcgttggttt aatgccttcc tgtaaccaca gagagataac ttcaaggatg cctgtctggc
    10441 gatgcatttt ggcatccatt cgcccaacta attgcccacg atgtaataat ggcagaacaa
    10501 aatagccata ctggcgtttc ggcgctgggg tatagcactc cagccggtag ctaaaatcaa
    10561 aaagctgctc tgcgcgtttg cgatcccaga caacaggatc aaaaggcgaa agtaccgcgc
    10621 tgtgcgttgc agtgagcttt ccggccagcg cacgctcgag tagcggcagc aaatcagcat
    10681 gcagccaaag attgcccaat ttttcaacat gcacagcaat gatttgctgc tgttcagccc
    10741 tcgcttcgcg ccacgccgcc agtgccggac gtttcagccg atagtaatct gccagccact
    10801 gttcgcggaa tattcccagg ctacgcgcac tgttatccag catgatgatt tctgcttctg
    10861 tttgcgaaac gagatcgcgc tcatcatccc agtcaggcat gacacggtgg gttaaatcat
    10921 aaacgcgctg gaagttgcgc cgttcaatca ccatcacctt tccggcagta aataaacctt
    10981 ccagatgccg tttatgcggc ttccattccc accagccgct tgcaccttta cgaggatgct
    11041 caaaatcggc tgaacgtacc ggccccttat catgaatatg ctgaattaac tgtgcaattt
    11101 ccgcctcatg ttcctgcatc caggcgtctt tgtatttcca gcccattttt tcaggtgcca
    11161 gcatgcggtg gcgaataaga cgaaagtcgc tacgcggcat aaagcaggct tcatgcgccc
    11221 agtattccat taattcgcca cgcgccagag actcatccag ccactgggca ggataatttc
    11281 ccagacgact gaaaagcacc agatatggac tacgggcaac aatattgatg gtatcgattt
    11341 gcagcaagga catgctggag atcgttgccg gaatatcctc caacgacgct cgacggcggg
    11401 gtttgtttaa caggccttgt gcggcaaggt gaagattacg cgcatcagca agggagaggt
    11461 gcggcagcga cattcatgac tccatcaatc gaacgctgcc gcggcgtaac tagttgccag
    11521 aagccagcga ggttagttgc gtaagcagtt tcgctggttc atcacctgaa agctgtgcgt
    11581 ctacaggcaa ataccaccaa ttttcttctg caaaggcccg gcatttcacc gcatcttttt
    11641 cagtcattac cagcgtttgc ccggcgctta ccaacgcact gacatccgca tggttcaaag
    11701 actgatgatc ggccagcggt acacattttt ccggttgtac gccacacatc ttcagcgtgg
    11761 caaaaaagcg cggcggatgc ccaatccccg ccatcgccac tacatgttca agctgagcaa
    11821 cgtcacaacg cgtaccggta cgtaaattca ccgcctgacc cggcagcaga tgcatgggga
    11881 tttcaccgct gcgagggaca ccgccgttga cgattaccgc atcaaccgac tttaagcgcc
    11941 ccgctcgctc acgcattggc cccgccggca accaccagcc attgccaaag cgacgcacac
    12001 catcaataac gacaatttcc acatcacgcg ccagacggta atgctgtaaa ccgtcgtcgg
    12061 ttacgatgat ctgcacatca gggtgttgcg ccagaatggc ttttaccgca tcagaacgaa
    12121 cgggagaaac cgcaacaggc gcatcagtgc gttgataaat caacacaggt tcatcacccg
    12181 cctgtgctgt tgtggtatct gccgacaata acagcggata agattcagcc ttactaccat
    12241 atccccgcga tacgaccccc acgcgaatac cgcgctgttg caactgttcc accagccaga
    12301 caacgaccgg ggtttttccg ttgccgcctg cggtgagatt accaaccacg acaaccggta
    12361 cgggggcacg ccaggcgcgc ttcagtttta gtttatagca aagacggatc gcgccactca
    12421 ccaggccata caaccaggag agtggcagca atagccgcca caaaggggat tcaccagacc
    12481 agattttttc gatcattggc caaactgcat tttgtgaagt tgcgcgtaaa cgccgcggtg
    12541 ctcaagcaaa tcgttatgcg taccgcgttc cacaatgacg ccatcctcga cgaccacgat
    12601 ttcgtctgcc ttttcaatgg tagacaagcg gtgggcaatc accagagagg tacggttttt
    12661 ctgcaactca tccagtgccg cctgaatcgc acgttcggat tcggtatcca gagccgaggt
    12721 agcttcatcc agaatcagaa tcgggctatc acgcagcaag gctcgagcga tagcaatacg
    12781 ctgacgctga ccgccagaga gcagcacgcc gttttcacca atcactgtat cgagaccgtt
    12841 atccatctta ttgatgaagt ccatggcgta ggccatacgc gccgcttctt caatttgctc
    12901 acggctgtac tgttcagtcc gtgcgtaagc aatgttgtta gcaaccgtat cgttaaacag
    12961 atggacattc tgcgacacca gagcaacctg gttacgtaac gacgccaggg tatactcgcg
    13021 cagatcgtga ccatccatca ggatttcgcc ttcatcaata tcgtaaaaac gagtgatcag
    13081 gctggcgatg gttgatttac ctgaaccaga gcgtccaacc agagcaaccg tcttccctgc
    13141 cggaattttc aggttgatgt tacgcaatgc aggtacgtca cgtcccggat aagtaaaggt
    13201 gacattgcgg aattccacgt cgccagtcgc acgctcgatc acgcgcttac cttcgtcttt
    13261 ctcctgctca ctgtccagaa tggtaaacag cgtctgacaa gccgccatac cgcgctggaa
    13321 ctgggcgtta acgttggtca gtgatttcag cggacgcatc agtgcaatca ttgaagagaa
    13381 aacaacggta atcgtaccgg cagtcaggct atccatgaca cttgggaagc tcgccgcata
    13441 cagaacaaac gccagcgcca aagaggcgat cagctgaatg atcggatcag agatggaaga
    13501 ggctgaaacc attttcatcc cctgaagacg cattcggttg ctgactttat caaagcgttt
    13561 cgtttccact tcctgaccac cgaaaatcaa tacttctttg tggcccttca gcatttgttc
    13621 ggcgctggtg gtcacctgcc ccatggtgtt ctgcatgttt ttactgatgt tgcgaaaacg
    13681 cttcgatact acgcgaatcg caatcgaaac aatcggtgcc agcacaatca aaatgatcga
    13741 cagttgccaa ctgtaataga acatcatgat gaacaggccg atgattgacg caccttcacg
    13801 cacaaccgtt atcagtgcgc cggaagaaga agaagcaacc tgttcggaat cgtaggtgat
    13861 acgtgacaac agcgtccccg ttgactgttt gtcaaaaaat gaaaccggca ttcccatcat
    13921 gtgaccaaac aggcggcgac gcatggtcat taccaccttt cctgataccc aggagataca
    13981 gtagctggag acatagctgg tgataccacg taaaatcatc agcccgatca ccaccagcgg
    14041 catccacacc agcacggagc gatctgtttt accaaagcca tcatcaagaa gtggcttaag
    14101 gagcgataac atgaaggtat cgctggctgc gttgaggatt aacgctacgc ccgccacgat
    14161 cagacccgct ttaaaaggcg caatggttgg ccacagtcgg cggaacgtct gccacgtaga
    14221 gagatctttg tcgttatgca ttcaaaaaac cagcatttgt tgaaatagcc gcatattcta
    14281 cccgttatcc actggcacgc caaaccactg atgataccaa cgaggtaaaa tttgctctct
    14341 gaggctgcta atccgccagc cttgcgctga aaaattgacc gtcacttgac cctgatgtgg
    14401 agtatcaagc cattgatatc cttgctgttg atagcgatgc ttaactttat tagagggcaa
    14461 tcgccatgcg ttatagcgcg atgccgatgc gagtgccact tttccattca ctcgctgaat
    14521 taatggcaac gatgatgagg tattactgcc atggtgaggt acctgaagca atgttgtctg
    14581 cacttgctgc cagtaacggc ttagcatctt ttgttcagcg gggacttcaa tatcaccggt
    14641 tagaagaatg ctattcgtcc cgtcataaac cttaaccaca caggaatggt tatttccttt
    14701 atcgttgcta gcttgtaaag gccagtgcac gctgaaacgc aatccttgcc attgccacgc
    14761 ttcgccacgc acacagggct gatgatgttc ccagtttaac ggacttctga tccataacat
    14821 cggccatgtg tgcaatattg agtccagccc tccccggtga tccagatgtt catgactcag
    14881 aataacgcct tccggttcaa gattatgcca gtggagccag gggataatca gttgttgccc
    14941 actatcccct tcgggccagg ccagtcctgt gtcatagaga atcgctttgc cgtttctggc
    15001 tatcaccatt gccagccctt gcccgacatc aagcatgtac acctgccact cgtcaggtcg
    15061 aggtttttgc cacagcggcc agcacatcag caagcctaca gccacacaca ttgctggcaa
    15121 cgttcgccag acgtttaatc gccataccac cagtaagaac catggggaaa atgatagcca
    15181 ttgccaacgt tcagcaatgt tgatccaccc ttctggcaaa ctctttaacc cccagaaaag
    15241 taaagccaaa gaccggtcgg caagaaacca taacccttgc tccaggatta acggcccgct
    15301 taaatgcaca a
//
LOCUS       DADMHC010000087        15233 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.087, whole genome shotgun sequence.
ACCESSION   DADMHC010000087 DADMHC010000000
VERSION     DADMHC010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15233
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.087"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(128..553)
                     /gene="arsC"
                     /locus_tag="JNZ57_002256"
     CDS             complement(128..553)
                     /gene="arsC"
                     /locus_tag="JNZ57_002256"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-dependent arsenate reductase"
                     /protein_id="HAY8828466.1"
                     /translation="MSNITIYHNPACGTSRNTLEMIRNSGTEPTIIHYLETPPTRDEL
                     VKLIADMGISVRALLRKNVEPYEELGLAEDKFTDDRLIDFMLQHPILINRPIVVTPLG
                     TRLCRPSEVVLEILPDAQKGAFSKEDGEKVVDEAGKRLK"
     gene            complement(566..1855)
                     /gene="arsB"
                     /locus_tag="JNZ57_002257"
     CDS             complement(566..1855)
                     /gene="arsB"
                     /locus_tag="JNZ57_002257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite/antimonite:H(+) antiporter ArsB"
                     /protein_id="HAY8828467.1"
                     /translation="MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPG
                     DIPVVWNIVWNATAAFIAVIIISLLLDESGFFEWAALHVSRWGNGRGRLLFTWIVLLG
                     AAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLV
                     NIVSADFFGLGFREYASVMVPVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAI
                     KDPATFKTGWVVLLLLLVGFFVLEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLR
                     GAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLADNGLWAAMLGTGFLTAFLSSI
                     MNNMPTVLVGALSIDGSTASGVIKEAMVYANVIGCDLGPKITPIGSLATLLWLHVLSQ
                     KNMTISWGYYFRTGIIMTLPVLFVTLAALALRLSFTL"
     gene            complement(1910..2263)
                     /gene="arsR"
                     /locus_tag="JNZ57_002258"
     CDS             complement(1910..2263)
                     /gene="arsR"
                     /locus_tag="JNZ57_002258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="As(III)-sensing metalloregulatory
                     transcriptional repressor ArsR"
                     /protein_id="HAY8828468.1"
                     /translation="MSFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQ
                     PKISRHLALLRESGLLLDRKQGKWVHYRLSPHIPAWAAKIIDEAWRCEQEKIQAIVRN
                     LARQNCSADSKNIYS"
     gene            3003..3086
                     /locus_tag="JNZ57_002259"
     CDS             3003..3086
                     /locus_tag="JNZ57_002259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165328.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Damage inducible protein"
                     /protein_id="HAY8828469.1"
                     /translation="MIDKAIIVLGALIALLELIRFLLQLLN"
     gene            complement(3140..4492)
                     /gene="gorA"
                     /locus_tag="JNZ57_002260"
     CDS             complement(3140..4492)
                     /gene="gorA"
                     /locus_tag="JNZ57_002260"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003861215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HAY8828470.1"
                     /translation="MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVN
                     VGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENV
                     LGKNNVDVIKGFARFVDAKMLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGF
                     FALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVM
                     NAEGPQLHTNAIPKAVVKNADGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAG
                     VKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHL
                     DYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMK
                     LVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTMR
                     "
     gene            complement(4564..5406)
                     /locus_tag="JNZ57_002261"
     CDS             complement(4564..5406)
                     /locus_tag="JNZ57_002261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HAY8828471.1"
                     /translation="MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAG
                     AGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPL
                     IARQLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGL
                     ILIDPPYEMKTDYQAVVSGIAEGYKRFATGTYALWYPVVLRQQIKRMLHDLEATGIRK
                     ILQIELAVLPDSDRRGMTASGMIVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSW
                     IVPE"
     gene            5609..7651
                     /gene="prlC"
                     /locus_tag="JNZ57_002262"
     CDS             5609..7651
                     /gene="prlC"
                     /locus_tag="JNZ57_002262"
                     /EC_number="3.4.24.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase A"
                     /protein_id="HAY8828472.1"
                     /translation="MTNPLLTPFELPPFSKILPEHVVPAVTQALNDCRENVERVVAQG
                     APYTWENLCQPLAEVDDVLGRIFSPVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQ
                     HEGLYKAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRLS
                     ELGNQYSNNVLDATMGWTKLVTDEAELAGMPESALAAAKAQAEAKELEGYLLTLDIPS
                     YLPVMTYCDNQALREEMYRAYSTRASDQGPNAGKWDNSKVMEEILALRHELAQLLGFE
                     NYAFKSLATKMAENPQQVLDFLTDLAKRARPQGEKELAQLRAFAKAEFGVDELQPWDI
                     AYYSEKQKQHLYSISDEQLRPYFPENKAVNGLFEVVKRIYGITAKERKDVDVWHPDVR
                     FFELYDENNELRGSFYLDLYARENKRGGAWMDDCVGQMRKADGSLQKPVAYLTCNFNR
                     PVNGKPALFTHDEVITLFHEFGHGLHHMLTRIETAGVSGISGVPWDAVELPSQFMENW
                     CWEPEALAFISGHYETGEPLPKELLDKMLAAKNYQAALFILRQLEFGLFDFRLHAEFR
                     PDQGAKILETLAEIKKLVAVVPSPSWGRFPHAFSHIFAGGYAAGYYSYLWADVLAADA
                     FSRFEEEGIFNRETGQSFLDNILSRGGSEEPMDLFKRFRGREPQLDAMLEHYGIKG"
     gene            7659..8411
                     /gene="rsmJ"
                     /locus_tag="JNZ57_002263"
     CDS             7659..8411
                     /gene="rsmJ"
                     /locus_tag="JNZ57_002263"
                     /EC_number="2.1.1.242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709277.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1516)-N(2))-methyltransferase
                     RsmJ"
                     /protein_id="HAY8828473.1"
                     /translation="MKICLIDETGAGDGALSVLAARWGLEHDEDNLMALVLTPEHLEL
                     RKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRD
                     AFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD
                     ITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLEPARLLATKRVVVK
                     RPDYAPPLANVTTPNAVVTKGHRFDIYAGTPV"
     gene            complement(8460..9929)
                     /gene="dtpB"
                     /locus_tag="JNZ57_002264"
     CDS             complement(8460..9929)
                     /gene="dtpB"
                     /locus_tag="JNZ57_002264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/tripeptide permease DtpB"
                     /protein_id="HAY8828474.1"
                     /translation="MNTTTPMGMLQQPRPFFMIFFVELWERFGYYGVQGVLAVFFVKQ
                     LGFSQEQAFVTFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGALVLAIGYFMTGMSL
                     LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLIAL
                     SLAPVIADRFGYSVTYNLCGAGLIIALLVYIACRGMVKDIGSEPDFKPMSFSKLLYVL
                     LGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFRQAFKLDKTGRNKMFVAFVLML
                     EAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVLASPILADIYT
                     HLGNKGKDLSMPMKFTLGMFMCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLG
                     ELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLET
                     LPVYTNVFGKIGLVTLGVAVVMLLMVPWLKRMIATPESH"
     gene            complement(10247..10681)
                     /gene="uspA"
                     /locus_tag="JNZ57_002265"
     CDS             complement(10247..10681)
                     /gene="uspA"
                     /locus_tag="JNZ57_002265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspA"
                     /protein_id="HAY8828475.1"
                     /translation="MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYS
                     DLYTGLIDVNLGDMQKRISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKY
                     DMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLRDEEE"
     gene            11071..11406
                     /gene="uspB"
                     /locus_tag="JNZ57_002266"
     CDS             11071..11406
                     /gene="uspB"
                     /locus_tag="JNZ57_002266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspB"
                     /protein_id="HAY8828476.1"
                     /translation="MISTVALFWALCVVCIVNMARYFSSLRALLVVLRNCDPLLYQYV
                     DGGGFFTSHGQPNKQVRLVWYIYAQRYRDHHDDEFIRRCERVRRQFILTSALCGLVVV
                     SLIALMIWH"
     gene            complement(11650..13149)
                     /gene="pitA"
                     /locus_tag="JNZ57_002267"
     CDS             complement(11650..13149)
                     /gene="pitA"
                     /locus_tag="JNZ57_002267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter PitA"
                     /protein_id="HAY8828477.1"
                     /translation="MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIY
                     TRAMRSQLAVVMAAVFNFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLL
                     AAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLI
                     VSPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSA
                     IGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQ
                     HPALLKQATGADQLVPAPEAGATQPAEFHCHPSNTINALNRLKGMLTTDVESYDKLSL
                     DQRSQMRRIMLCVSDTIDKVVKIPGVSADDQRLLKKLKSDMLSTIEYAPVWIIMAVAL
                     ALGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVL
                     SSSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAVLLSGGLYWLSLQFL"
     gene            13381..14583
                     /locus_tag="JNZ57_002268"
     CDS             13381..14583
                     /locus_tag="JNZ57_002268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HAY8828478.1"
                     /translation="MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILM
                     SGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLF
                     CDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLELNGMTVGCEKLVIATG
                     GLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITA
                     ENGTVFRENLLFTHRGLSGPAVLQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPN
                     QSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGY
                     RTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQ
                     DLIAAKSS"
     gene            complement(14899..>15233)
                     /locus_tag="JNZ57_002269"
     CDS             complement(14899..>15233)
                     /locus_tag="JNZ57_002269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2776 domain-containing protein"
                     /protein_id="HAY8828479.1"
                     /translation="GIYVLVSSDASARLAPGIILICLGMICYSIFSKVWLLALVWRRT
                     CSLANRIPMIPVFTCLFCLFLASFLAEMAQTDMGYFIPSRVLVGLGAVCFTLFSIVSI
                     LEAGSAKK"
BASE COUNT         3844 a         3902 c         3998 g         3489 t
ORIGIN      
        1 acgctctaca tatttcatgc catatattga atttgcacgg ttttgtaggt cggataagac
       61 gcgttagcgt cgcatccgac ataaacaaag cgcactttac caactatcgg cagtggatat
      121 cgccgcttta tttcaggcgc ttacccgctt catcaaccac tttctcgcca tcttccttgg
      181 agaatgcgcc tttttgcgca tctggcagaa tttccagcac cacttctgaa gggcggcaca
      241 ggcgagttcc cagcggcgtc accacaatcg ggcgattaat cagaatcggg tgctgaagca
      301 taaagtcgat taaccgatcg tcagtaaatt tatcttccgc aaggcccagc tcctcatacg
      361 gttcgacgtt tttacgcagc agcgcgcgta cggaaatccc catatcggca atgagtttga
      421 ccagttcatc gcgcgttggc ggagtttcca gataatggat aatggtcggt tctgtgccgc
      481 tgttgcggat catctccagc gtattacgcg acgtgccgca ggccgggttg tgataaatgg
      541 taatgttgct catatcagta tctcattaca aagtgaaaga gagacgtagc gccagcgcag
      601 ccagcgtcac aaacagcaca ggcagggtca tgataatccc tgtacggaag taatatcccc
      661 agctgatagt catattcttc tgtgaaagta cgtgcagcca gagtagtgta gccaggctac
      721 caattggggt aattttcggt cccaaatcgc agccaatcac attggcataa accatcgctt
      781 ctttgataac gccagatgcc gtgctgccat caatggacaa cgcgccaacc agtaccgtcg
      841 gcatattgtt cataatagaa gagaggaagg ctgtgaggaa tccggtgccg agcatcgcgg
      901 cccacaggcc gttatccgcc agcacgttga gtacgccaga aagatattcc gttaatccgg
      961 cattgcgcag gccataaacc accagataca tgccgagcga gaagatgaca atttgccagg
     1021 gggcaccgcg caggacttta cccgtattaa tcgcatgacc gcgtttagcg acgacaaata
     1081 atatcagcgc gcccacagct gcaatggcgc tcaccggaat gccgagcggt tccaggacga
     1141 aaaatcccac cagcagaagc agtaaaacaa cccagccagt tttgaacgta gcaggatctt
     1201 tgatcgcttc tgcgggagat ttcagcagcg ccatatcgta gttctgcgga atatctttgc
     1261 gaaaatagag atgtagcatc accagcgtgg caacaatcgc ggcgatatcc accggcacca
     1321 tcaccgaggc gtattcgcga aagccgaggc caaagaaatc agcggaaacg atattcacca
     1381 agttggagac aataagcggg aggctggcgg tatcggcaat gaatccggcc gccatcacga
     1441 acgccagcgt cgtgccttta ctgaatccta aagccagcag catggcgatg acaatcggcg
     1501 tcaaaataag cgctgcgcca tcattggcaa acagggcggc aacggcagca ccgagcagga
     1561 caatccaggt aaacagcaag cgaccacgac cattacccca gcgtgagacg tgcagcgccg
     1621 cccattcaaa aaagccggac tcatccagca gcaggctgat gataatgacg gcaataaacg
     1681 cagccgtcgc gttccagacg atattccaca ccaccggaat atcacccgga tggaccacgc
     1741 ccgtaactaa cgccagtact gcgccgagcg ttgcactcca gccgatgcct aaacctttcg
     1801 gctgccagat aaccaataca atggtcagga caaagatagc gcctgccagt aacataatgc
     1861 ctcctggata aaacacatgc gaaaatacat atgtgtttag ctaaattttt taactgtaaa
     1921 tgttcttact gtctgcggaa cagttttgtc gagccaggtt gcggacaatt gcctgaatct
     1981 tttcctgttc acatcgccag gcttcatcaa ttattttcgc cgcccatgct ggaatatgcg
     2041 gcgataagcg gtaatgaacc catttacctt gcttgcggtc cagcaatagc ccgctttcac
     2101 gcagcaatgc caggtggcgg gagatcttgg gctgcgactg gtcgagagca gtgcagagat
     2161 cgcagacgca taactctccc agttcgctga gcagtaaaac gatgcccaga cgggtttcat
     2221 cagcaagaat tttgaacaat tggatgggta acagaaatga catattgcgc tcctgattgt
     2281 tgcaggtagt gtctctcttc gaagcggata agtcaaaaac atatatgatt taacgaatgt
     2341 gtaagtgcag aggaaggtaa taggtgtgaa ttttgagttg gctattcatt tgaaaggagg
     2401 tctgaatcag gacgtaaaaa aaccgacttt gcgtcggttt tttactttcc agccctgagt
     2461 tggtggctct ggctggagtg agagagttct tatctaacag ctcaatacta ttagccagtg
     2521 gctaacattg caagaattag cgatttcttc agctggcgga gggagcactt cggtatatat
     2581 cgcagtgacg atttatatac tttcactggg tcatcgtcat attaagcctt gtccgaatcc
     2641 ggatgtaaaa aaaccgactt tgcgtcggtt ttttactttc cagccctgag ttggtggctc
     2701 tgactggagt gagatagcca tcatctaacg catcaatgct aataccatac tgaaactatt
     2761 gcaaggacgt gctggtttta taacctgcat gtactgtatg attatccagt tagctctgag
     2821 gcattttcac tctggcaatg cgcataaacg ctttcaaagt cctggtcaga agtacgggtg
     2881 gtgccgttaa ctgatgctct ggccggagtg agagagttct tatctaacaa tgagacatgc
     2941 gccgtgacag gcagtggatg agtaagcgga tgcattctca ctccatcgca tggagaaaac
     3001 gggtgattga taaagcaatc atcgttctag gggcgttaat tgcgctgctg gaactgatcc
     3061 gctttctgct tcagcttctg aactgatagc ggaaacgtaa ttaagggcta agagcacact
     3121 actcttagcc ctttaacatt taacgcattg tcacgaactc ttctgccgcc gttgggtgaa
     3181 tggcgacggt attgtcgaag tcttttttgg ttgcccccat cttcagcgcc accgcgaagc
     3241 cctgcaacat ttcgtccata ccaaagccaa tgccgtgaat accgacaatc ttctcttccg
     3301 atccaacgca caccagcttc atgcggcacg gctggcggtg agtggtgacg gcggtataca
     3361 tcgcggtgaa agaggattta tacactttca cctgatcgtc gccatactgc tcgcgcgcct
     3421 gcggttccgt taaaccaaca gtaccaatcg gcggatggct gaagaccacg gtcggaatgt
     3481 tgctgtaatc cagatgctca tccggcttgt tattaaacag gcgttcagag agacggcgac
     3541 ccgctgcaac tgccaccggt gtcagctcca ctgcacccgt gttatcgccc accgcgtaaa
     3601 taccttcaat gttggtgttt tgatatttat cgacgacgat atagcctttt tcgttggttt
     3661 taacgccagc ggcttcgagg ttgatgttgt cattggcagg ctcgcgacca atcgcccaaa
     3721 tcaggcaatc caccgtttca ctgcgaccat cttccagctc cagcgtcagg ctaccatcgg
     3781 catttttcac taccgctttc gggatggcgt tggtgtgcag ctgcgggcct tcggcgttca
     3841 tcacttcgac cagcgtttcg gaaatcatcg ggtcgaagct gcgcagcggc gcatgtttac
     3901 gcacaaacag atgcgttttc gcgccgaggc cgttaatcac gcccgccagc tcaacggcga
     3961 tgtaacccgc gccaacaacc gccacgcgct ctggcaaagc aggaagggcg aagaagccat
     4021 cagaatcaat accgtattcc acgcccggaa tatccgggtg gctcggacga ccgcctgtgg
     4081 cgatcagaat atgatcggcc gtgatggttt cgccgtttac ctccagcatt ttggcatcaa
     4141 cgaagcgggc aaagcctttg attacatcaa cgttattttt accgagcacg ttttcatagg
     4201 aagtatgaat acggtcgata taggcggtac ggctggcgat caacgtttcc cagttgaact
     4261 tgttgatggt ggtatcgaaa ccataatcag ggccgtacat atggatcgct tcacggattt
     4321 gcgccgcgtg ccacatcact tttttcggca cgcagccgac gttcacgcag gtgccgccca
     4381 gctctttggc ttcaatcagt gcgcatttct ggccgtacat agccgcgcgg ttgatggagg
     4441 ctataccgcc gctgccgccg ccgatggcga tgtaatcata gtgtttagtc atgacagagt
     4501 gtccttatcg ttgattaccg cgattgtagc gcgagacgta ataggtgcca gcaatggctg
     4561 caattactcc ggcacgatcc agcttacggt ggcgtgcccg gtgcctgccg gaaccagttt
     4621 gctgtgcagc cacggcagca cgttattcat ctgctgttcc agtttccacg gcgggttaat
     4681 cacaatcatg ccggaagcgg tcatgccacg gcgatcgctg tctggcagta ccgccagttc
     4741 aatttgcaga attttgcgaa taccggtcgc ttccagatcg tggagcatgc gcttaatttg
     4801 ctgacgcagc accaccggat accacagtgc gtaagtacca gtggcgaaac gtttgtaacc
     4861 ttctgctatc ccgctgacca ccgcctgata gtcggttttc atttcatacg gcgggtcgat
     4921 aaggattaaa ccacggcggg aaaccggcgg cagtttggcc ttaagctgct ggaaaccatc
     4981 ggctttttcg acgcgcgcac ggctgtcttt ctgaaattca gaacgcagca acgggtaatc
     5041 gctcgggtgc agttcggtca gttgcaggct gtcttgttcg cgcagtagct ggcgagcaat
     5101 caatggcgaa ccggggtagt aacgcaactg accgctacgg ttgaagtgtt ttaccacatt
     5161 gatgtacgcc tccagttctg cgggcaaatc gtcctgctgc cagatacggg cgatgccttc
     5221 gagatattcg ccggtacgct cggcatgttc gctgcctaac tgataacgcc cggcccctgc
     5281 gtgggtgtcg agatagagaa acggtttatc tttctctttc agcgactcga tgatcaggct
     5341 ctgaacggta tgtttaagga cgtcggcgtg gttgccagcg tgaaagctgt ggcgataact
     5401 gagcatgggt aaaggtgttc cggtaagtaa aaatcggccc gtattcgggg cgcacaaaag
     5461 cgtatcagga cagtataccg aaaagaggcc gccgccgcga aagcgtaacg tttctcattg
     5521 aaattcacta cacttaaccc catgctacac acattatgta aagcgcctgt tgagcgcttc
     5581 cttaacctct ttaaccagga ctgcgcgaat gacgaatccg ttactgactc cctttgaatt
     5641 gcctccgttt tctaaaattc tcccggaaca tgtcgttcca gccgtgactc aggcgctgaa
     5701 cgattgccgc gaaaatgtgg agcgcgtagt agcgcaaggg gcaccgtaca cctgggaaaa
     5761 tctctgccag ccgttggcgg aagtggacga tgtgttgggg cgtatcttct ccccggtcag
     5821 ccacctgaac tcggtgaaaa atagcccgga actgcgtgaa gcctacgagc aaaccctgcc
     5881 gctgctgtcg gaatacagca cctgggtagg gcaacatgaa gggctgtata aagcgtaccg
     5941 cgacctgcgc gatggcgatc attacgccac gctgaacacg gcgcagaaga aagcggttga
     6001 taacgccctg cgtgattttg aactctctgg cataggtctg ccgaaagaga aacagcagcg
     6061 ttacggcgaa attgcgaccc gtctttctga actgggcaac cagtacagca acaacgtcct
     6121 cgatgcgaca atgggctgga ccaaactcgt taccgacgaa gcggagctgg cggggatgcc
     6181 tgaaagcgcg ctggctgcgg caaaagccca ggccgaagcg aaagagctgg aaggctacct
     6241 gctgacgctg gatatcccaa gctacctgcc ggtaatgacc tactgcgaca accaggcctt
     6301 gcgtgaagag atgtatcgcg cttacagcac ccgcgcctcc gatcaaggcc cgaacgccgg
     6361 taaatgggat aacagcaagg tgatggaaga gatcctcgct ctgcgtcacg aactggcgca
     6421 actgctgggc tttgaaaact acgcctttaa atcccttgcc actaaaatgg cagaaaaccc
     6481 gcagcaggtg ctggatttct taaccgatct ggcaaaacgc gcgcgtccgc aaggcgaaaa
     6541 agagctggca caactgcgcg ccttcgccaa agcggaattt ggcgtcgatg agttgcagcc
     6601 gtgggatatc gcgtactaca gcgaaaaaca aaaacagcac ctctacagca tcagtgacga
     6661 acagctgcgt ccgtacttcc cggaaaacaa agcggttaac ggcctgtttg aagtggtgaa
     6721 acgtatttac ggcatcaccg ctaaagagcg taaagatgtt gatgtctggc atccggatgt
     6781 acgtttcttc gaactgtatg acgagaacaa cgaactgcgc ggcagcttct acctcgatct
     6841 gtatgcccgt gaaaacaagc gcggcggggc gtggatggat gactgcgtag gccagatgcg
     6901 taaagctgac ggttctctgc aaaaaccggt cgcgtatttg acttgtaact tcaaccgccc
     6961 ggtaaatggt aaaccggcgc tgttcactca cgacgaagtg atcaccctgt tccacgagtt
     7021 cggtcacggc ctgcaccata tgctgacccg catcgaaacc gctggtgttt ccggtatcag
     7081 cggtgtgccg tgggatgcgg tcgaactgcc gagtcagttt atggaaaact ggtgctggga
     7141 gccggaggcg ctggcgttta tctctggtca ctatgaaacc ggcgaaccgc tgccgaaaga
     7201 gttgctggat aaaatgctgg cggcgaagaa ctaccaggcg gcgctgttta ttctgcgcca
     7261 gctggagttc ggcctgttcg atttccgcct ccatgccgag ttccgcccgg atcagggtgc
     7321 gaaaatcctc gaaactctgg cagaaatcaa gaaactggtt gccgtagtac cgtctccatc
     7381 ctggggccgt ttcccgcacg ctttcagcca tattttcgcc ggtggttatg ccgcaggtta
     7441 ctacagctac ctgtgggctg acgtactggc ggcagatgcc ttctcgcgct ttgaggaaga
     7501 gggcattttc aaccgtgaaa ccgggcagtc gttcctcgac aacattctga gccgtggcgg
     7561 ttcagaagag ccgatggatc tgttcaaacg cttccgtggt cgtgaaccgc agctggatgc
     7621 gatgctggag cattacggca ttaagggctg atcattcagt gaaaatctgc ttaattgatg
     7681 aaacaggcgc cggagacggc gccttatctg ttctggcggc ccgctggggg ctggagcacg
     7741 atgaagacaa cctgatggcg ctggtgttaa cgccggaaca tctggaattg cgcaagcgtg
     7801 atgagccaaa acttggcggc atctttgttg attttgttgg cggagcgatg gcgcaccgac
     7861 gcaaattcgg cggtggtcgc ggtgaggcgg tggcgaaagc ggtgggcatt aaaggcgatt
     7921 atttgccgga tgtggtggac gccaccgcag ggctggggcg cgatgccttt gtactggctt
     7981 cagtcggctg ccgcgtgcgg atgctggagc gtaatccagt ggttgccgcg ctactcgacg
     8041 acggcctggc gcgtggttat gcggatgcgg aaatcggcgg ctggttgcag gagcggttgc
     8101 agttaattca cgcctccagc ctgacggcgc taaccgatat taccccacgc ccgcaggtgg
     8161 tctatctcga tccgatgttc ccgcataagc agaaaagcgc gctagtgaaa aaagagatgc
     8221 gtgtctttca gtcgctggtg ggaccggatc ttgatgccga tggattactg gagcctgcac
     8281 gcttgctggc gaccaaacgc gtggtggtaa agcgcccgga ctacgcgcca ccgctagcga
     8341 atgtcaccac gccaaacgcg gttgtgacta aagggcatcg ctttgatatc tatgcaggta
     8401 cgcccgtgta aaagtaaagc agggtagcga taacgctacc ctgctttctg caagaataat
     8461 taatggcttt ccggcgtcgc aatcatgcgt ttcagccacg gcaccatcaa cagcatcact
     8521 actgcaacgc ccagcgtgac cagaccaatc ttaccaaaca cgttggtata gacgggcaac
     8581 gtctcaagcg gatcggtaat gttgtccggc accgcggtaa atgttgccac atagccgccc
     8641 agcaagaacg cggcagcctg cgtcaggaac cacatcccga gaataaagcc catcaaatgc
     8701 tgcggcacca gggcagcaat catcgccagg ccaagggcgc taataaacag ttcacctaag
     8761 ctctggaata agtacaccag cacgataaac catggcgatg tcagcccttg tgcatccgca
     8821 aaccacattc ccgcagctgc cgccgtcaaa aagcccagtg agcacataaa catgccgaga
     8881 gtaaatttca tcggcatcga gaggtctttg cctttgttac ccagatgcgt gtaaatgtct
     8941 gccagtattg ggctggcgag taccacccag aacgggttaa gcgcctggaa gctgaccggg
     9001 ttgatggaaa aaccgagaat ttcatgatgc acgttgttga tggcaaagaa gttcagcgat
     9061 gttggcatct gggcgtagag aatgtaaaac accaccgctt cgagcatcag gacaaaggcg
     9121 acaaacattt tattgcgccc ggttttatcc agcttgaatg cctgacgaaa gaagatgatg
     9181 gtgacgacga tggagagaac aatcagcacc agattggcga cttctacgtt gtgcatcagc
     9241 catgcacata cgaagatcat caccacgctg ccaagtaata cgtacaacag tttgctgaag
     9301 ctcatcggct tgaagtcggg ttcagaacca atgtctttca ccattccacg acaggcgatg
     9361 taaaccagta atgcgataat taaccccgcc ccgcacaggt tgtaggtgac tgaataaccg
     9421 aatctatcag cgatcacagg ggccagcgat aacgctatca acgagccgat attgatcgac
     9481 atatagaaca gggtgaatgc gccatcaagc cgcggatctt tcggcggata gcacttcgaa
     9541 agcaagctgg ctgggttagc tttaaacagg ccgttaccga cagcgatagt ccccagggcg
     9601 atgaaaatca ggtcaggctt aagtagcgac atgccggtca tgaagtagcc aatcgccagc
     9661 acaagtgctc cgagaacaat ggtgcgtttg gtccccagca ggtggtcgcc gacatagccg
     9721 ccaatggaaa tgaggccata gaccagcgca gcaaaagcac caaaagtgac aaaagcctgc
     9781 tcttgcgaga atccaagctg tttaacgaag aaaaccgcca gtacgccctg cacgccgtag
     9841 tagccgaatc gctcccataa ctcgacaaaa aagatcatga aaaatgggcg aggttgctgc
     9901 agcatcccca tgggtgttgt tgtattcata tttattaacc ttccaatacc atcctgaaaa
     9961 gtatgaacgc gtaagggata acgcgcgaaa aagtttacat ctgtcagaga ttcttaatat
    10021 tgatgcggtg aatagattaa tacactatta caacagaaaa taaccagcta atcacactaa
    10081 tgatggaaaa tatgatggtg ttaaatgttg tattggcagg agattttgat tgcgtacgca
    10141 gatcgtaggc cagataaggg gtttacgctg catcaggtaa caaggcgcgc caaaaagcaa
    10201 aacgcccgca tatgcgggcg ttcaggaaca cgtcgtggag ggaagattat tcttcttcgt
    10261 cgcgcagcgg aacaatcagc atatcaacgt gaacggtgtt gatcagctga cgtgcggaag
    10321 acatcagttt gctccagaag tcctggtggt gaccacaaac caccagatcc atatcgtatt
    10381 tcttgattgc atcgaccaga acctggccca ggtcgccgct gccgctcagg gtttcagtga
    10441 ttgggtagcc tgcattagtg gaaagctcgg tcagcgcatg atgtgtctct tcagagatgc
    10501 gtttctgcat atcacccaga ttcacatcaa taagcccggt gtataggtca gagtagttta
    10561 catctacgtg gatcagagaa actttcgcat tgtaggggcg agccatagag actgctttct
    10621 ctaccagaac tttgctttcc ggggagagat cgaccgcgat gagaatgtgt ttataagcca
    10681 tagtgttact ccttccataa agttgtcgat gactggccag ctagcgtttc ttgtgccgtt
    10741 acgtcacccg cgtcctgcga actacgtgcg cggggctaac ccagccgtaa agattcagtg
    10801 ttaagaccat ccttacctta tagcgacccg gatgatccgt caatccgcct tgcttacccg
    10861 ttagataaac aaattttcga catgaatata ttgatagtgg ttaaccttct ggaaaaaaaa
    10921 caacctgatc tcctacacta tctatagagc cgctcggatg ttggtcacca caaaagcggt
    10981 ttctccagga cctggtgtta actgattggc agcgtatcgg gagcggtagc cccgggtgga
    11041 actccgcggg caggtcgccg gggaggaggt atgataagca ccgtcgcatt attttgggct
    11101 ttatgtgtcg tttgcattgt taacatggcg cgctatttct catcactacg cgcgttgtta
    11161 gtggtactgc gtaactgcga tccattgctc tatcaatatg ttgatggagg gggctttttt
    11221 acctcacatg gccaaccaaa caaacaggtg cgtctcgttt ggtatatcta tgcccaacgt
    11281 tatcgcgatc atcacgatga tgagtttatt cgccgctgtg agcgggtgcg tcggcagttt
    11341 attctgacta gcgcattgtg tggtctggtg gtggtcagcc tgattgcatt gatgatttgg
    11401 cattaagcac ttcagcaata ataacgcata aaaaaagcgg gccagtaaac tgacccgctc
    11461 gagactgatt acaaacgcaa aattgcctga tgcgctacgc ttatcaggcc tgcataatct
    11521 ctgcaatcta ttgaatttgc atgtttttgt aggccggata aggcgttcac gccgcatccg
    11581 gcatgaacaa agcgcactat gtcacaatct gaagcgggcc agctgacccg ctcgttttgg
    11641 tgcgtacgat tacaggaact gcaaggagag ccagtacagc ccgccggaaa gcagtaccgc
    11701 agccggaagg gtaaacaccc aggccatcag aatgctggtc acggttttac gctgtaagcc
    11761 gccaccatct accaccatcg tccccgcgac agaagaggag agtacgtgag tagtggaaac
    11821 cggcatcccg gtataactcg ccaggccgat agacactgcc gccgtcatct gggcagacat
    11881 cccctgagcg taggtcatgc ctttcttacc gattttctca ccgatagtcg ttgccacacg
    11941 acgccagcca atcatcgtac cgatacctaa cgccagcgcg accgccatga tgatccacac
    12001 cggtgcatac tcgatggtgc taagcatgtc ggacttcagt ttcttcaaca ggcgctgatc
    12061 gtcagcactc acgccaggta tcttcactac tttgtcgata gtgtcagaaa cgcacagcat
    12121 aatgcggcgc atctggctac gttgatcaag cgacagcttg tcgtagcttt ccacatcggt
    12181 agttaacata cctttcaggc ggttgagcgc gttaatggta ttcgacggat ggcaatggaa
    12241 ctccgcgggt tgcgttgcgc cagcttccgg agccggtact aactgatcag caccggtagc
    12301 ctgtttcagc agcgcaggat gctgctcaaa gtaagcttcg acgttgttga tggcatcacg
    12361 ggtacgggtg atttcgtagc cagtggcatt catattcacc acgaagcctg caggtgcgac
    12421 accaatcaat accaacataa ccagaccaat gcctttctga ccatcgttcg cgccgtgcga
    12481 aaacgccacg ccgatagcgg aaaggatcag cgcaatacgc gtccagaacg gcggcttttt
    12541 cttgccgtct ttcttttcac gctccgctgg ggtcaggtgg atacgggcgc gtttcttggt
    12601 gccgctccag tagcgacgca gcaagaaaat cagaccgcca gcaaacacca ggccgacaat
    12661 aggggaaacg atcagagaac cgaaaatact taatactttc gggatattga gtgcatccac
    12721 cactgacgtc ccggtcatca acgcattggt taaaccaatc ccgatgatcg cgccaatcag
    12781 tgtatgagag ctggatgcag gtaaaccaaa gtaccaggta cccaggttcc agataatcgc
    12841 cgccagcaac atagagaaca ccatggcaag gccatgagac gatcccatat taagcagcag
    12901 atccgtcggc agcatatgca caatggcata ggcaacactc agaccaccca gcaaaacacc
    12961 caaaaagttg aacaccgccg ccataaccac ggcgagctga gaacgcatcg cgcgggtata
    13021 gataacggtt gccacggcgt tggctgtgtc atggaaacca ttgatggctt cgtagaacag
    13081 cacaaaagcc agtgcaagca ataataacag cccggtatgc aaatccaggc cagcaaacaa
    13141 atgtagcata ggacgttacg ccattttgag gacatgaacg cggcgcatta tcagtgactt
    13201 tcgcggcgcg ggcaaagtga aatatagact ttttttgatt tgcctcctgt atggatttca
    13261 ctcaaaaaat aattatctta tataattcag gcaaatactt ccttttagta atattgatgc
    13321 tggtgtgacc actgaggaat ctttacaatt cacgcccgtt ttttctaaga ggagcgcaac
    13381 gtggaaaggt ttgatgccat tattataggc gctggtgcgg cgggtatgtt ctgttctgcg
    13441 ctggcaggtc aggcaggacg ccgggttctg ctgatcgata atggtaaaaa accagggcgc
    13501 aaaatcctta tgtctggcgg tgggcgctgc aactttacca acctttatgt cgaaccaggc
    13561 gcttatctga gccagaatcc gcatttttgt aagtctgcac tcgcgcgttt tacccagtgg
    13621 gatttcattg atctggtcaa taaacacggc atcgcctggc acgagaaaac gttaggacaa
    13681 ctcttctgcg atgactccgc gcagcagatt gtcgacatgc tggtggatga gtgcgagaag
    13741 ggcaatgtaa ccttcagatt gcgtagcgaa gtgctgagtg tggcgaagga tgaaacaggc
    13801 ttcacgcttg aactgaacgg catgactgtc ggttgcgaaa agctggtcat cgcgaccggt
    13861 gggctgtcaa tgccggggct gggcgcatcg ccgtttggtt ataagattgc cgaacaattt
    13921 ggcctcaacg tgctgccgac ccgtgcgggt ctggtgccat tcactctgca taaaccgttg
    13981 ctcgaagagt tacaggtgct ggcgggcgtg gcggtgcctt ccgtgattac cgctgaaaac
    14041 ggcaccgttt tccgtgagaa cttactcttc acccaccgcg gcttatctgg accggcggtg
    14101 ttgcagattt ccagctactg gcaaccgggt gaatttgtca gtatcaatct gctaccggat
    14161 gtggacctcg aaaccttcct gaatgagcag cgtaacgcac atccgaatca gagcctgaaa
    14221 aacacactgg cggttcatct accgaagcgg ttggttgaac gcttacagca actcgggcaa
    14281 atcccggatg tttcgctaaa acagctcaac gtgcgtgacc aacaggcact gattagcaca
    14341 ttgaccgact ggcgcgtaca acccaacggc actgaaggct atcgcactgc cgaagtgacg
    14401 ctcggcggcg tggacaccaa cgaactctct tcacgaacga tggaagcgcg caaagtgcct
    14461 gggctgtact tcatcggcga agtgatggac gttaccggct ggctgggggg ctataacttc
    14521 cagtgggcgt ggtcgagtgc gtgggcttgt gcgcaggatt tgattgcagc gaagtcgtcc
    14581 tgacctgtta cctaaagatg aaaattatta gagccgcatt aaaaatgagc taattttgat
    14641 agtggctatc ttgtgattat tttctaatga gcccgtgaac tgaaaccctc caagcttaat
    14701 ataaggtgga aggaaagatg attgaaaact cacccagtgg ccagatcttt ataaaatatg
    14761 aacaggctga aaaagacagt aactttgttg tttttttatc cttaaccact atgcattaat
    14821 gctgcgttat ttcatgatgc ctaagaaaaa ccagcgttac gcaaatggtc aacgctggtt
    14881 ttatccggta cgttgcaatt attttttagc agaacctgct tctaatattg aaacgattga
    14941 gaacaacgta aagcataccg ctcccaaacc gaccaaaacc cgcgaaggaa taaaatatcc
    15001 catgtcggtc tgcgccattt ccgcaagaaa cgatgccagg aaaaggcaaa acaggcaggt
    15061 gaagacggga atcatcggta ttctgttggc taacgaacag gtacgtctcc ataccagtgc
    15121 cagtagccag acttttgaga atatgctgta acagatcatt ccgaggcaaa taagaataat
    15181 gccgggagcc agtcgggcgc ttgcatcgga actgactaag acgtatatcc cct
//
LOCUS       DADMHC010000088        15150 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.088, whole genome shotgun sequence.
ACCESSION   DADMHC010000088 DADMHC010000000
VERSION     DADMHC010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15150)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15150)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15150
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.088"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(118..1401)
                     /gene="gltA"
                     /locus_tag="JNZ57_002270"
     CDS             complement(118..1401)
                     /gene="gltA"
                     /locus_tag="JNZ57_002270"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HAY8828480.1"
                     /translation="MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFD
                     PGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYD
                     EFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREI
                     AAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILER
                     AMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKML
                     EEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKD
                     DLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGW
                     IAHWSEMHSDGMKIARPRQLYTGYEKRDFKSDIKR"
     gene            complement(1607..1714)
                     /locus_tag="JNZ57_002271"
     CDS             complement(1607..1714)
                     /locus_tag="JNZ57_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828481.1"
                     /translation="MRKSYEVGISPKINLCNSVEVLTNSFGTVISGRQV"
     gene            2095..2499
                     /gene="sdhC"
                     /locus_tag="JNZ57_002272"
                     /gene_synonym="cybA"
                     /gene_synonym="dhsC"
     CDS             2095..2499
                     /gene="sdhC"
                     /locus_tag="JNZ57_002272"
                     /gene_synonym="cybA"
                     /gene_synonym="dhsC"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000263334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b556 subunit"
                     /protein_id="HAY8828482.1"
                     /translation="MWALFMIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFV
                     AVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFG
                     YLEETFEAGKRSAKISFVITVVLSLLAGVLVW"
     gene            2493..2840
                     /gene="sdhD"
                     /locus_tag="JNZ57_002273"
                     /gene_synonym="cybS"
                     /gene_synonym="dhsD"
     CDS             2493..2840
                     /gene="sdhD"
                     /locus_tag="JNZ57_002273"
                     /gene_synonym="cybS"
                     /gene_synonym="dhsD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase membrane anchor subunit"
                     /protein_id="HAY8828483.1"
                     /translation="MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELT
                     YEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYAKPLALRLMLQLVIVVALV
                     VYVIYGFVVVWGV"
     gene            2840..4606
                     /gene="sdhA"
                     /locus_tag="JNZ57_002274"
     CDS             2840..4606
                     /gene="sdhA"
                     /locus_tag="JNZ57_002274"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HAY8828484.1"
                     /translation="MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRS
                     HTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHM
                     GLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTI
                     FSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHIN
                     TGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERY
                     APNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELS
                     RTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACV
                     SVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNN
                     RNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNT
                     QRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESM
                     TRRSVNMEPKLRPAFPPKIRTY"
     gene            4622..5338
                     /locus_tag="JNZ57_002275"
     CDS             4622..5338
                     /locus_tag="JNZ57_002275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HAY8828485.1"
                     /translation="MRLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKE
                     KDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRD
                     LVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCP
                     SFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPK
                     GLNPTRAIGHIKSMLLQRNA"
     gene            5639..8440
                     /gene="sucA"
                     /locus_tag="JNZ57_002276"
     CDS             5639..8440
                     /gene="sucA"
                     /locus_tag="JNZ57_002276"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HAY8828486.1"
                     /translation="MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRST
                     FQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFR
                     GHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEAL
                     KQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLG
                     AKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQ
                     DLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSV
                     RARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQV
                     GFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFI
                     DLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNL
                     YRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPE
                     AVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFF
                     HRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIW
                     EAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQL
                     CAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGT
                     FLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAM
                     QEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGY
                     MSVHQKQQQDLVNDALNVE"
     gene            8455..9672
                     /gene="odhB"
                     /locus_tag="JNZ57_002277"
     CDS             8455..9672
                     /gene="odhB"
                     /locus_tag="JNZ57_002277"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HAY8828487.1"
                     /translation="MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDK
                     VVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQ
                     QASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKSPAKESAP
                     AAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRK
                     QYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTP
                     RGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMS
                     TPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIK
                     ELLEDPTRLLLDV"
     gene            9948..11114
                     /gene="sucC"
                     /locus_tag="JNZ57_002278"
     CDS             9948..11114
                     /gene="sucC"
                     /locus_tag="JNZ57_002278"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HAY8828488.1"
                     /translation="MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWV
                     VKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAAT
                     DIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPQLIHKVALDPLTGPMPYQG
                     RELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGA
                     DGNALFRQLDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIV
                     KLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKVVLVNIFGGIVRCDLIADGIIG
                     AVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK"
     gene            11114..11983
                     /gene="sucD"
                     /locus_tag="JNZ57_002279"
     CDS             11114..11983
                     /gene="sucD"
                     /locus_tag="JNZ57_002279"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HAY8828489.1"
                     /translation="MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG
                     GTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPT
                     LDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYE
                     AVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEA
                     AAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRS
                     LADIGEALKTVLK"
     gene            complement(12087..12809)
                     /gene="mngR"
                     /locus_tag="JNZ57_002280"
     CDS             complement(12087..12809)
                     /gene="mngR"
                     /locus_tag="JNZ57_002280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannosyl-D-glycerate transport/metabolism system
                     transcriptional repressor MngR"
                     /protein_id="HAY8828490.1"
                     /translation="MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRV
                     TVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEVLIF
                     EVIPADDFLQQQLQITAQDRVWHVKRVRYRKQKPMALEETWMPLALFPDLTWQVMENS
                     KYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKPILEKISRGYLVDGRVFEY
                     SRNAFNTDDYKFTLIAQRKSSR"
     gene            12918..14894
                     /gene="mngA"
                     /locus_tag="JNZ57_002281"
     CDS             12918..14894
                     /gene="mngA"
                     /locus_tag="JNZ57_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS 2-O-a-mannosyl-D-glycerate transporter
                     subunit IIABC"
                     /protein_id="HAY8828491.1"
                     /translation="MVLFYRAHWRDYKNDQVRIMMNLTTLTHRDALRLNARFTSREEA
                     IHALTQRLAALGKISSTEQFLEEVYRRESLGPTALGEGLAVPHGKTAAVKEAAFAVAT
                     LSEPLQWEGVDGPEAVDLVVLLAIPPNEAGTMHMQLLTALTTRLADDEIRARIQSATT
                     PDELLSALDDKGGTQPSASFSNAPTIVCVTACPAGIAHTYMAAEYLEKAGRKLGVNVY
                     VEKQGANGIEGRLTADQLNSATACIFAAEVAIKESERFNGIPALSVPVAEPIRHAEAL
                     IQQALTLKRSDETRTVQQDTQPVKSVKTELKQALLSGISFAVPLIVAGGTVLAVAVLL
                     SQIFGLQDLFNEENSWLWMYRKLGGGLLGILMVPVLAAYTAYSLADKPALAPGFAAGL
                     AANMIGSGFLGAVVGGLIAGYLMRWVKNHLRLSSKFNGFLTFYLYPVLGTLGAGSLML
                     FVVGEPVAWINNSLTAWLNGLSGSNALLLGAIFGFMCSFDLGGPVNKAAYAFCLGAMA
                     NGVYGPYAIFASVKMVSAFTVTASTMLAPRLFKEFEIETGKSTWLLGLAGITEGAIPM
                     AIEDPLRVIGSFVLGSMVTGAIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAAIGWF
                     GAALVGAAISTAILLIWRRHAVKHGNYLTDGVMP"
     gene            14912..>15150
                     /locus_tag="JNZ57_002282"
     CDS             14912..>15150
                     /locus_tag="JNZ57_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828492.1"
                     /translation="MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQD
                     NEYKYYVLDGQTAILEDYFAVKPENKDRVKKQVEAG"
BASE COUNT         3608 a         3830 c         4145 g         3567 t
ORIGIN      
        1 aatatatgaa tgtccgatag tggattttat ttttacaatt ttttgtgttt aggcatataa
       61 aaattaaccc gccatttgaa cggcgggtta aaatatttac aacttagcaa tcaaccatta
      121 acgcttgata tcgcttttaa agtcgcgttt ttcatatcct gtatacagct gacgcggacg
      181 ggcaatcttc ataccgtcac tgtgcatttc gctccagtgg gcgatccagc caacggtacg
      241 tgccattgcg aaaatgacgg tgaacatgga agacggaata cccatcgctt tcaggatgat
      301 accagagtag aaatcgacgt tcgggtacag tttcttctcg ataaagtacg ggtcgttcag
      361 cgcgatgttt tccagctcca tagccacttc cagcaggtca tctttggtgc ccagctcttt
      421 cagaacttca tggcaggttt cacgcattac ggtggcgcgc gggtcgtaat ttttgtacac
      481 gcggtgaccg aagcccatca ggcggaaaga atcattttta tctttcgcac gacgaacaaa
      541 ttccggaatg tgtttaacgg agctaatttc ttccagcatt ttcagcgccg cttcgttagc
      601 accaccgtgc gcaggtcccc acagtgaagc aatacctgct gcgatacagg caaacgggtt
      661 cgcacccgaa gagccagcgg tacgcacggt ggaggtagag gcgttctgtt catggtcagc
      721 gtgcaggatc agaatacggt ccatagcacg ttccagaatc ggattaactt catacggttc
      781 gcacggcgtg gagaacatca tattcaggaa gttaccggca taggagagat cgttgcgcgg
      841 ataaacaaat ggctgaccaa tggaatactt gtaacacatc gcggccatgg tcggcatttt
      901 cgacagcagg cggaacgcgg caatttcacg atgacgagga ttgttaacat ccagcgagtc
      961 gtgatagaac gccgccagcg cgccggtaat accacacatg actgccattg gatgtgagtc
     1021 gcgacggaaa gcgtggaaca gacgggtaat ctgctcgtgg atcatggtat gacgggtcac
     1081 cgtagtttta aattcgtcat actgttcctg agtcggtttt tcaccattca gcaggatgta
     1141 acaaacttcc aggtagttag aatcggtcgc cagctgatcg atcgggaaac cgcggtgcag
     1201 caaaatacct tcatcaccat caataaaagt aattttagat tcgcaggatg cggttgaagt
     1261 gaagcctggg tcaaaggtga acacaccttt tgaaccgaga gtacggatat caataacatc
     1321 ttgacccagc gtgcctttca gcacatccag ttcaacagct gtgtccccgt tgagggtgag
     1381 ttttgctttt gtatcagcca tttaaggtct ccttagcgcc ttattgcgta agactgccgg
     1441 aacttaaatt tgccttcgca catcaacctg gctttacccg tttgttattt ggctcgccgc
     1501 tctgtgaaag aggggaaaac ctgggtacag agctctgggc gcttgcaggt aaaggatcca
     1561 ttgatgacga ataaatggcg aatcaagtac ttagcaatcc gaattattaa acttgtctac
     1621 cactaataac tgtcccgaat gaattggtca atacttccac actgttacat aagttaatct
     1681 taggtgaaat accgacttca taacttttac gcattatatg cttttcctgg taatgtttgt
     1741 aacaactttg ttgagcgatt gtcaaattag atgattaaaa attaaataaa tgttgttatc
     1801 gtgacctgga tcactgttca ggataaaacc cgacaaacta tatgtaggtt aattgtaatg
     1861 attttgtgaa cagcctatac tgccgccagg tctccggaac accctgcaat cccgagccac
     1921 ccagcgttgt aacgtgtcgt tttcgcatct ggaagcagtg ttttgcatga cgcgcagtta
     1981 tagaaaggac gctgtctgac ccgcaagcag accggaggaa ggaaatcccg acgtctccag
     2041 gtaacagaaa gttaacctct gtgcccgtag tccccaggga ataataagaa cagcatgtgg
     2101 gcgttattca tgataagaaa tgtgaaaaaa caaagacctg ttaatctgga cctacagacc
     2161 atccggttcc ccatcacggc gatagcgtcc attctccatc gcgtttccgg tgtgatcacc
     2221 tttgttgcag tgggcatcct gctgtggctt ctgggtacca gcctctcttc ccctgaaggt
     2281 ttcgagcaag cttccgcgat tatgggcagc ttcttcgtca aatttatcat gtggggcatc
     2341 cttaccgctc tggcgtatca cgtcgtcgta ggtattcgcc acatgatgat ggattttggc
     2401 tatctggaag aaacattcga agcgggtaaa cgctccgcca aaatctcctt tgttattact
     2461 gtcgtgcttt cacttctcgc aggagtcctc gtatggtaag caacgcctcc gcattaggac
     2521 gcaatggcgt acatgatttc atcctcgttc gcgctaccgc tatcgtcctg acgctctaca
     2581 tcatttatat ggtcggtttt ttcgccacca gtggcgaact gacatatgaa gtctggatcg
     2641 gtttcttcgc ctctgcgttc accaaagtgt tcaccctgct ggcgctgttt tctatcttga
     2701 ttcatgcctg gatcggcatg tggcaggtgt tgaccgacta cgctaaaccg ctggcattgc
     2761 gcctgatgct gcaactggtg attgtcgttg cactggtggt ttacgtgatt tatggattcg
     2821 ttgtggtgtg gggtgtgtga tgaaattgcc agtcagagaa tttgatgcag ttgtgattgg
     2881 tgccggtggc gcaggtatgc gcgcggcgct gcaaatttcc cagagcggcc agacctgtgc
     2941 gctgctctct aaagtcttcc cgacccgttc ccataccgtt tctgcgcaag gcggcattac
     3001 cgttgcgctg ggtaataccc atgaagataa ctgggaatgg catatgtacg acaccgtaaa
     3061 agggtcggac tatatcggtg accaggacgc gattgaatat atgtgtaaaa ccgggccgga
     3121 agcgattctg gaactcgaac acatgggcct gccgttctcg cgtcttgatg atggtcgtat
     3181 ctatcaacgt ccgtttggcg gtcagtcgaa aaacttcggc ggcgagcagg cggcacgcac
     3241 tgcggcggcg gctgaccgta ccggtcacgc actgttgcac acgctttatc agcagaacct
     3301 gaaaaaccac accaccattt tctccgagtg gtatgcgctg gatctggtga agaaccagga
     3361 tggcgcggtg gtgggttgta ctgcactgtg catcgaaact ggtgaagtgg tttatttcaa
     3421 agcccgcgct accgtgctgg cgactggcgg ggcagggcgt atttatcagt ccaccactaa
     3481 cgcccacatt aacactggcg acggcgtcgg catggctatc cgcgcaggcg taccggtgca
     3541 ggatatggaa atgtggcagt tccacccgac cggtattgcc ggtgcgggcg tactggtcac
     3601 cgaaggttgc cgtggtgaag gcggttatct gctgaacaaa catggcgaac gctttatgga
     3661 gcgttatgcg ccgaacgcca aagacctggc gggccgtgat gtggtggcgc gttccatcat
     3721 gatcgaaatc cgtgaaggtc gcggctgtga tggtccgtgg gggccacacg cgaaactgaa
     3781 actcgaccac ctgggtaaag aagttctcga atcccgtctg ccgggcatcc tggaactctc
     3841 ccgtaccttc gctcacgtcg atccggtgaa agagccgatc ccggttatcc caacctgtca
     3901 ttacatgatg ggcggtattc cgaccaaagt gaccggtcag gcgctgactg tgaatgagaa
     3961 aggcgaagat gtggttgttc cgggactgtt tgccgttggt gaaatcgctt gtgtatcggt
     4021 acacggcgct aaccgtctgg gcggcaactc gctgctggac ctggtggtct ttggtcgtgc
     4081 ggcaggtctg catctgcaag agtctatcgc cgagcagggc gcattgcgcg atgccagcga
     4141 gtctgatgtt gaagcatctc tggatcgtct gaaccgctgg aacaataatc gtaatggtga
     4201 agatccggtg gcgattcgta aagcgctgca agaatgtatg cagcataact tctcggtctt
     4261 ccgtgaaggt gatgcgatgg cgaaagggct tgagcagttg aaagttatcc gcgagcgtct
     4321 gaaaaatgcc cgtctggatg acacttccag cgagttcaac acccagcgcg ttgagtgcct
     4381 ggaactggat aacctgatgg aaacggcgta tgcaacggct gtttctgcca acttccgtac
     4441 cgaaagccgt ggcgcgcata gccgcttcga cttcccggat cgtgatgatg aaaactggct
     4501 gtgccactcc ctgtatctgc cagagtcgga atccatgacg cgccgaagcg tcaacatgga
     4561 accgaaactg cgcccggcat tcccgccgaa gattcgtact tactaatgcg gagacaggaa
     4621 aatgagactc gagttttcaa tttatcgcta taacccggat gttgatgatg ctccgcgtat
     4681 gcaggattac accctggaag cggaagaagg tcgcgacatg atgctgctgg atgcgcttat
     4741 ccagctgaaa gagaaagatc ccagcctgtc gttccgccgc tcctgtcgtg aaggtgtgtg
     4801 cggttccgac ggtctgaaca tgaacggcaa gaatggtctg gcctgtatta ccccgatttc
     4861 ggcactcaac cagccgggca agaagattgt gattcgcccg ctgccaggtt taccggtgat
     4921 ccgcgatttg gtggtagaca tgggacaatt ctatgcgcaa tatgagaaaa ttaagcctta
     4981 cctgttgaat aatggacaaa atccgccagc tcgcgagcat ttacagatgc cagagcagcg
     5041 cgaaaaactc gacgggctgt atgaatgtat tctctgcgca tgttgttcaa cctcttgtcc
     5101 gtctttctgg tggaatcccg ataagtttat cggcccggca ggcttgttag cggcatatcg
     5161 tttcctgatc gatagccgtg ataccgagac tgacagccgc ctcgacggtt tgagcgatgc
     5221 attcagcgta ttccgctgtc acagcatcat gaactgcgtc agtgtatgtc cgaaggggct
     5281 gaacccgacg cgcgccatcg gccatatcaa gtcgatgttg ttgcaacgta atgcgtaaac
     5341 cgtaggcctg ataagacgcg caagcgtcgc atcaggcaac cagtgccgga tgcggcgtga
     5401 acgccttatc cggcctacaa gtcattaccc gtaggcctga taagcgcagc gcatcaggcg
     5461 taacaaagaa atgcaggaaa tctttaaaaa ctgcccctga cactaagaca gtttttaaag
     5521 gttccttcgc gagccactac gtagacaaga gctcgcaagt gaaccccggc acgcacatca
     5581 ctgtgcgtgg tagtatccac ggcgaagtaa gcataaaaaa gatgcttaag ggatcacgat
     5641 gcagaacagc gctttgaaag cctggttgga ctcttcttac ctctctggcg caaaccagag
     5701 ctggatagaa cagctctatg aagacttctt aaccgatcct gactcggttg acgctaactg
     5761 gcgttcgacg ttccagcagt tacctggtac gggagtcaaa ccggatcaat tccactctca
     5821 aacgcgtgaa tatttccgcc gcctggcgaa agacgcttca cgttactctt caacgatctc
     5881 cgaccctgac accaatgtga agcaggttaa agtcctgcag ctcattaacg cataccgctt
     5941 ccgtggtcac cagcatgcga atctcgatcc gctgggactg tggcagcaag ataaagtggc
     6001 cgatctggat ccgtctttcc acgatctgac cgaagcagac ttccaggaaa ccttcaacgt
     6061 cggttcattt gccagcggca aagaaaccat gaaactcggc gagctgctgg aagccctcaa
     6121 gcaaacctac tgcggcccga ttggtgccga gtatatgcac atcaccagca ccgaagaaaa
     6181 acgctggatc caacagcgta tcgagtctgg tcgcgcgact ttcaatagcg aagagaaaaa
     6241 acgcttctta agcgaactga ccgccgctga aggccttgaa cgttacctcg gcgcaaaatt
     6301 ccctggcgca aaacgcttct cgctggaagg cggtgacgcg ttaatcccga tgcttaaaga
     6361 gatgatccgc cacgctggca acagcggcac ccgcgaagtg gttctcggga tggcgcaccg
     6421 tggtcgtctg aacgtgctgg tgaacgtgct gggtaaaaaa ccgcaagact tgttcgacga
     6481 gttcgccggt aaacataaag aacacctcgg cacgggtgac gtgaaatacc acatgggctt
     6541 ctcgtctgac ttccagaccg atggcggcct ggtgcacctg gcgctggcgt ttaacccgtc
     6601 tcaccttgag attgtaagcc cggtagttat cggttctgtt cgtgcccgtc tggacagact
     6661 tgatgagccg agcagcaaca aagtgctgcc aatcaccatc cacggtgacg ccgcagtgac
     6721 cgggcagggc gtggttcagg aaaccctgaa catgtcgaaa gcgcgtggtt atgaagttgg
     6781 cggtacggta cgtatcgtta tcaacaacca ggttggtttc accacctcta atccgctgga
     6841 tgcccgttct acgccgtact gtactgatat cggtaagatg gttcaggccc cgattttcca
     6901 cgttaacgcg gacgatccgg aagccgttgc ctttgtgacc cgtctggcgc tcgatttccg
     6961 taacaccttt aaacgtgatg tcttcatcga cctggtgtgc taccgccgtc acggccacaa
     7021 cgaagccgac gagccgagcg caacccagcc gctgatgtat cagaaaatca aaaaacatcc
     7081 gacaccgcgc aaaatctacg ctgacaagct ggagcaggaa aaagtggcga cgctggaaga
     7141 tgccaccgag atggttaacc tgtaccgcga tgcgctggat gctggcgatt gcgtagtggc
     7201 agagtggcgt ccgatgaaca tgcactcttt cacctggtcg ccgtacctca accacgaatg
     7261 ggacgaagag tacccgaaca aagttgagat gaagcgcctg caggagctgg cgaaacgcat
     7321 cagcacggtg ccggaagcag ttgaaatgca gtctcgcgtt gccaagattt atggcgatcg
     7381 ccaggcgatg gctgccggtg agaaactgtt cgactggggc ggtgcggaaa acctcgctta
     7441 cgccacgctg gttgacgaag gcattccggt tcgcctgtcg ggtgaagact ccggtcgcgg
     7501 taccttcttc caccgccacg cggtgatcca caaccagtct aacggttcca cttacacgcc
     7561 gctgcaacac atccataacg ggcagggcgc gttccgcgtc tgggactccg tactgtctga
     7621 agaagcagtg ctggcgtttg aatacggtta tgccaccgca gaaccacgca ctctgaccat
     7681 ctgggaagcg cagttcggtg acttcgctaa cggtgctcag gtggttatcg accagttcat
     7741 ctcctctggc gaacagaaat ggggccggat gtgtggtctg gtgatgttgc tgccgcacgg
     7801 ttatgaaggg caggggccgg agcactcctc cgcgcgtctg gaacgttatc tgcaactttg
     7861 tgctgagcaa aacatgcagg tgtgcgtacc gtctaccccg gcacaggttt accacatgct
     7921 gcgtcgtcag gcgctgcgcg ggatgcgtcg tccgctggtc gtgatgtcgc cgaaatccct
     7981 gctgcgtcat ccgctggcgg tttccagcct cgaagaactg gcgaacggca ccttcctgcc
     8041 agccatcggt gaaatcgacg agcttgatcc gaagggcgtg aagcgcgtag tgatgtgttc
     8101 tggtaaggtt tattacgacc tgctggaaca gcgtcgtaag aacaatcaac acgatgtcgc
     8161 cattgtgcgt atcgagcaac tctacccgtt cccgcataaa gcgatgcagg aagtgttgca
     8221 gcagtttgct cacgtcaagg attttgtctg gtgccaggaa gagccgctca accagggcgc
     8281 atggtactgc agccagcatc atttccgtga agtgattccg tttggggctt ctctgcgtta
     8341 tgcaggccgc ccggcctccg cctctccggc ggtagggtat atgtccgttc accagaaaca
     8401 gcaacaagat ctggttaatg acgcgctgaa cgtcgaataa ataaaggata cacaatgagt
     8461 agcgtagata ttctggtccc tgacctgcct gaatccgtag ccgatgccac cgtcgcaacc
     8521 tggcataaaa aacccggcga cgcagtcgta cgtgatgaag tgctggtaga aatcgaaact
     8581 gacaaagtgg tactggaagt accggcatca gcagacggca ttctggatgc ggttctggaa
     8641 gatgaaggta caaccgtaac gtctcgtcag atccttggtc gcctgcgtga aggcaacagc
     8701 gccggtaaag aaaccagcgc caaatctgaa gagaaagcgt ccactccggc gcaacgccag
     8761 caggcgtctc tggaagagca aaacaacgat gcgttaagcc cggcgatccg tcgcttgctg
     8821 gctgaacata acctcgacgc cagcgctatt aaaggcaccg gcgtgggtgg tcgtctgacc
     8881 cgtgaagatg tggaaaaaca tctggcgaaa tccccggcga aagagtctgc accggcagcg
     8941 gctgctccgg cggcgcaacc ggctctggct gcacgtagtg aaaaacgtgt cccgatgact
     9001 cgcctgcgta agcgtgtggc agagcgtctg ctggaagcga aaaactccac cgccatgctg
     9061 accacgttca acgaagtcaa catgaagccg attatggatc tgcgtaagca gtacggtgaa
     9121 gcgtttgaaa aacgccacgg catccgtctg ggctttatgt ccttctacgt gaaagcggtg
     9181 gttgaagccc tgaaacgtta cccggaagtg aatgcttcta tcgacggcga tgacgtggtt
     9241 taccacaact atttcgacgt cagcatggcg gtttctacgc cgcgcggcct ggtgacgccg
     9301 gttctgcgtg atgtcgatac cctcggcatg gcagacatcg agaagaaaat caaagagctg
     9361 gcagtcaaag gccgtgatgg caagctgacc gttgaagatc tgaccggtgg taacttcacc
     9421 atcaccaacg gtggtgtgtt cggttccctg atgtctacgc cgatcatcaa cccgccgcag
     9481 agcgcaattc tgggtatgca cgctatcaaa gatcgtccga tggcggtgaa tggtcaggtt
     9541 gagatcctgc cgatgatgta cctggcgctg tcctacgatc accgtctgat cgatggtcgc
     9601 gaatccgtgg gcttcctggt aacgatcaaa gagttgctgg aagatccgac gcgtctgctg
     9661 ctggacgtgt agtagtttaa gtttcacctg cactgtagac aggataaggc attatcgcct
     9721 tctccggcaa ttgaagcctg atgcgacgct taacgcgtct tatcaggcct acgggaagca
     9781 ccaatgtagg tcggataagg cgcttgcgcc gcatccgaca agcgatgcct gatgcgacac
     9841 ttacgcgtct tatcgggcct acaggtgacc gacaatgccc ggaagcgata cgaaatattc
     9901 ggtctacggt ttaaaagata acgattactg aaggatggac agaacacatg aacttacatg
     9961 aatatcaggc aaaacaactt tttgcccgct atggcttacc agcaccggtg ggttatgcct
    10021 gtactactcc gcgcgaagca gaagaagccg cttcaaaaat cggtgccggt ccgtgggtag
    10081 tgaaatgtca ggttcacgct ggtggccgcg gtaaagcggg cggtgtgaaa gttgtaaaca
    10141 gcaaagaaga catccgtgct tttgcagaaa attggctcgg caagcgtctg gtaacgtatc
    10201 aaacagatgc caatggccaa ccggttaacc agattctggt tgaagcagcg accgatattg
    10261 ctaaagagct gtatctcggt gccgttgtag accgtagttc ccgtcgtgtg gtctttatgg
    10321 cctccactga aggcggcgtg gaaatcgaaa aagtggcgga agaaactccg cagctgatcc
    10381 ataaagttgc gcttgatccg ctgacaggcc cgatgccgta tcagggacgc gagctggcgt
    10441 tcaaactggg tctggaaggt aaactggttc agcagttcac caaaatcttc atgggtctgg
    10501 cgaccatttt cctagagcgc gacctggcgt tgatcgaaat caacccgctg gtcatcacca
    10561 aacagggtga tctgatttgc ctcgacggca aactgggcgc tgatggcaac gcactgttcc
    10621 gccagcttga tctgcgcgaa atgcgtgacc agtcgcagga agatccgcgt gaagcacagg
    10681 ctgcacagtg ggaactgaac tacgttgcgc tggacggtaa catcggttgt atggttaacg
    10741 gcgcaggtct ggcgatgggt acgatggaca tcgttaaact gcacggcggc gaaccggcta
    10801 acttccttga cgttggcggc ggcgcaacca aagaacgtgt aaccgaagcg ttcaaaatca
    10861 tcctctctga cgacaaagtg aaagtcgttc tggttaacat cttcggcggt atcgttcgtt
    10921 gcgacctgat cgctgacggt atcatcggcg cggtagcaga agtgggtgtt aacgtaccgg
    10981 tcgtggtacg tctggaaggt aacaacgccg aactcggcgc gaagaaactg gctgacagcg
    11041 gcctgaatat tattgcagca aaaggtctga cggatgcagc tcagcaggtt gttgccgcag
    11101 tggaggggaa ataatgtcca ttttaattga taaaaacacc aaggttatct gccagggctt
    11161 tactggtagc caggggactt tccactcaga acaggccatt gcatacggca ctaaaatggt
    11221 tggcggcgta accccaggta aaggcggtac tacccacctc ggcctgccgg tgttcaacac
    11281 cgtgcgtgaa gctgttgctg ctactggcgc taccgcttct gttatctacg taccagcacc
    11341 gttctgcaaa gactccattc tggaagctat tgatgcaggc atcaaactga ttatcaccat
    11401 cactgaaggc atcccgacgc tggatatgct gactgtgaaa gtgaaactgg acgaagccgg
    11461 cgttcgtatg atcggcccga actgcccggg cgttatcact ccgggtgaat gcaaaatcgg
    11521 tatccagccg ggtcacattc acaaaccggg taaagtgggt atcgtttccc gttccggtac
    11581 actgacctat gaagcggtta aacagaccac ggattacggt ttcggtcagt cgacctgtgt
    11641 tggtatcggc ggtgacccga tcccaggctc taactttatc gacatcctcg aaatgttcga
    11701 aaaagatccg cagaccgaag cgatcgtgat gatcggtgag atcggcggta gcgctgaaga
    11761 agaagcggca gcgtacatca aagagcacgt taccaagcca gttgtaggtt acatcgctgg
    11821 tgtgactgcg ccgaaaggca aacgtatggg ccacgcgggt gcgatcattg ccggtgggaa
    11881 agggactgcg gatgagaaat tcgctgctct ggaagccgca ggcgtgaaaa ccgttcgcag
    11941 cctggcggat atcggtgaag cactgaaaac tgttctgaaa taaatatctg taataagaaa
    12001 tagccctcgc cgcttccctc tacaggaatg gcgaagggct gtcggtttcg acatggttgg
    12061 ccatcgtatg atggcctttt ttgtgcttat cgcgatgatt ttcgctgcgc tatcagggta
    12121 aatttatagt catcggtatt aaaagcgttg cggctatatt caaacacccg accatcaact
    12181 aaatatccac gcgatatttt ttcaagaatc ggctttgtct ggctgatatt aagcagacgg
    12241 ctcatctctt cggttggcat cagaggaatg atttcctgtt cgctacgatc gataaccatc
    12301 ttcttcactt cttcaataaa gtgatatttc gaattttcca tgacctgcca ggtgagatcc
    12361 gggaacaacg caagcggcat ccaggtttct tccagcgcca ttggcttttg cttgcgatag
    12421 cgcacgcgct tcacatgcca cacacgatcc tgcgcggtga tttgtagctg ttgctgaaga
    12481 aaatcgtcag ccggaatcac ttcaaatatc aggacttcac tgtgtgtatc gacgtgacgg
    12541 tccgacagtt tttcatcaaa actggttaac tgaaaaatat cgtaattgac ccgctcttct
    12601 ttgacgtaag tcccgctgcc ctgaatgctt tcgaggatct gctgctcgac tagctggcgc
    12661 aaagcctgac gcaccgtaac ccggctgacg ccaaactctg tttgtagcgc tgattcagtg
    12721 ggtaacgcat cgccaggttt aagctcgcca cgcgcaattt gttcacgaat gcgatcggca
    12781 atctgccggt ataagggctt gtgtcccatt tttagtatct cattaatacg aatttagcca
    12841 ttatgcccga taaattcatc ctgtaaataa tgcaaataca atacaaataa tttcaatcaa
    12901 gtgaaattga tcatataatg gtattgtttt atcgggcaca ctggcgcgac tataaaaacg
    12961 atcaagtgag gatcatgatg aatctgacga ctctgaccca ccgcgatgcg ttgcgtctga
    13021 atgcgcgctt taccagccgt gaagaggcca tccacgcgtt gactcaacgt cttgctgctc
    13081 tggggaaaat ttccagtact gagcaatttc tggaagaagt gtatcgccgt gaaagccttg
    13141 gcccgaccgc cttaggtgaa gggttggctg tgccgcatgg caaaactgct gcggtaaaag
    13201 aagcggcgtt tgcggtcgcc acactcagcg agccgcttca gtgggaaggc gttgatggcc
    13261 cggaagcagt tgatttagtg gtgctgctgg cgattccccc caatgaagcg ggtactatgc
    13321 atatgcaact gctgacagcg ctgaccacgc gccttgcgga tgatgagatt cgggcgcgta
    13381 tacagtcggc gacgacgcct gatgagttgc tctcggcgct ggatgacaag ggaggcacgc
    13441 aaccttctgc ctctttttcc aacgcgccaa ctatcgtctg cgtaacggcc tgtccggcgg
    13501 gtattgctca cacctatatg gctgcggaat atctggaaaa agccggacgc aaactcggcg
    13561 taaatgttta cgttgaaaaa caaggcgcta acggcattga agggcgttta acggcggatc
    13621 aactcaatag tgcaaccgcc tgtatttttg cggctgaagt cgccatcaag gagagtgagc
    13681 gttttaatgg cattcccgcg ctttcagtgc ctgttgccga gccgattcgc catgcagaag
    13741 cgttgatcca acaagcgctt accctcaagc gtagcgatga gacgcgtacc gtacagcaag
    13801 atacgcaacc ggtgaaaagt gtcaaaacgg agctgaaaca ggcactgttg agcggaatct
    13861 cttttgccgt accgttgatt gtcgcggggg gcacggtgct ggcggtcgcg gtattactgt
    13921 cgcaaatctt cgggctacaa gatctgttta atgaagaaaa ctcctggctg tggatgtacc
    13981 gcaagctggg cggcgggctg ctcggaattt tgatggtacc ggtgctcgcg gcctataccg
    14041 cctattctct ggcagataaa ccggcgttag cgccaggctt tgcggctgga cttgccgcca
    14101 acatgatcgg ctccgggttt ctcggcgcgg ttgttggcgg attgatagcc ggttacttga
    14161 tgcgctgggt gaaaaatcac ttgcgtctta gcagtaaatt caatggattc ctgacttttt
    14221 atctctaccc ggtgctcggt acgttgggag cgggcagtct gatgctgttt gtggtgggag
    14281 aacctgtcgc atggatcaat aactcgctta ccgcctggct gaacggtctg tcaggaagta
    14341 acgcgctgtt gctgggtgcc attttcggtt ttatgtgttc ctttgacctt ggagggccag
    14401 tgaacaaagc cgcttatgca ttctgcctgg gcgcaatggc gaacggcgtt tacggcccgt
    14461 atgccatttt cgcctccgtc aaaatggttt cggcatttac cgtaaccgct tccacgatgc
    14521 tcgcaccgcg cctgtttaaa gagtttgaaa ttgagaccgg gaaatccacc tggctgttag
    14581 ggctggcagg tattaccgaa ggggcgatcc cgatggcgat tgaagatccg ctgcgggtta
    14641 ttggttcgtt tgtgctgggc tctatggtaa cgggcgctat tgtcggtgcg atgaatatcg
    14701 gcctttcgac acccggtgcc ggcattttct cgctcttttt acttcatgat aatggcgcgg
    14761 gcggtgttat ggcggcaatt ggctggtttg gtgcggcatt ggtgggggct gcaatctcga
    14821 ctgcaattct cctgatctgg cggcgtcacg cggttaagca tggcaactat ctgactgatg
    14881 gcgtaatgcc ataaacaaaa aggaaacgac gatgaaagcg gtatctcgcg ttcacatcac
    14941 cccgcatatg cactgggatc gagagtggta tttcaccacc gaagagtcac gtattctgct
    15001 ggtcaataat atggaagaga tcctgtgccg actggaacag gacaacgaat acaaatatta
    15061 cgtactcgac gggcaaacgg cgatcctcga agattatttc gcggtgaaac cggaaaacaa
    15121 agaccgtgtg aagaaacagg tagaagccgg
//
LOCUS       DADMHC010000089        15099 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.089, whole genome shotgun sequence.
ACCESSION   DADMHC010000089 DADMHC010000000
VERSION     DADMHC010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15099)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15099)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15099
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.089"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..416)
                     /locus_tag="JNZ57_002283"
     CDS             complement(<1..416)
                     /locus_tag="JNZ57_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001371617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828493.1"
                     /translation="MSEKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVT
                     SGHPVNPLLGAKVLPGETDLALPAPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADI
                     RLQLRDNTLILSDNGGRSLYFEHLFPGEDGYSRSESL"
     gene            complement(576..788)
                     /gene="rpmE"
                     /locus_tag="JNZ57_002284"
     CDS             complement(576..788)
                     /gene="rpmE"
                     /locus_tag="JNZ57_002284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HAY8828494.1"
                     /translation="MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFF
                     TGKQRDVATGGRVDRFNKRFNIPGSK"
     gene            991..3189
                     /gene="priA"
                     /locus_tag="JNZ57_002285"
     CDS             991..3189
                     /gene="priA"
                     /locus_tag="JNZ57_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HAY8828495.1"
                     /translation="MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIG
                     VVVSVSDVSELPLNELKAVVEVLDVEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI
                     LLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEF
                     NDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS
                     AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL
                     HSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWR
                     YHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVL
                     DLKGQKVQAGLAPALITRMRQHLQANNQVILFLNRRGFAPALLCHDCGWIAECPRCDH
                     YYTLHQAQQHLHCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPMFPGVPIS
                     RIDRDTTSRKGALEQQLAKVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSA
                     DFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTYHPEHPLLQTLLYKGYDAFAEQALAE
                     RRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADDKLWILGPVPALAPK
                     RGGRWRWQILLQHPSRVRLQHIISGTLALINTIPDSRKVKWVLDVDPIEG"
     gene            3345..4370
                     /gene="cytR"
                     /locus_tag="JNZ57_002286"
     CDS             3345..4370
                     /gene="cytR"
                     /locus_tag="JNZ57_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CytR"
                     /protein_id="HAY8828496.1"
                     /translation="MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRV
                     EKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDPFFSEIIRGIEVTAANHGYLVLI
                     GDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
                     LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVD
                     PQYIARGDFTFEAGSKAMQQLLDLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLS
                     IIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHVGSGSRLMDCELIIR
                     GSTRALP"
     gene            4462..5421
                     /gene="ftsN"
                     /locus_tag="JNZ57_002287"
     CDS             4462..5421
                     /gene="ftsN"
                     /locus_tag="JNZ57_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HAY8828497.1"
                     /translation="MAQRDYVRRSQPAPSRRKKSTSRKKQRNLPAVSPAMVAIAAAVL
                     VTFIGGLYFITHHKKEESETLQSQKVTGNGLPPKPEERWRYIKELESRQPGVRAPTEP
                     SAGGEVKTPEQLTPEQRQLLEQMQADMRQQPTQLVEVPWNEQTPEQRQQTLQRQRQAQ
                     QLAEQQRLAQQSRTTEQSWQQQTRTSQAAPVQAQPRQSKPASTQQPYQDLLQTPAHTT
                     AQSKPQQAAPVARAADAPKPTAEKKDERRWMVQCGSFRGAEQAETVRAQLAFEGFDSK
                     ITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNCIRLAAGG"
     gene            5514..6044
                     /gene="hslV"
                     /locus_tag="JNZ57_002288"
     CDS             5514..6044
                     /gene="hslV"
                     /locus_tag="JNZ57_002288"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008457544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HAY8828498.1"
                     /translation="MTTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVI
                     AGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADET
                     ASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDIC
                     IYTNHFHTIEELSYKA"
     gene            6054..7385
                     /gene="hslU"
                     /locus_tag="JNZ57_002289"
     CDS             6054..7385
                     /gene="hslU"
                     /locus_tag="JNZ57_002289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019841241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HslU--HslV peptidase ATPase subunit"
                     /protein_id="HAY8828499.1"
                     /translation="MSEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEEL
                     RHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRD
                     LTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFR
                     KKLREGQLDDKEIEIDLAAAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKI
                     KDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREG
                     VQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQA
                     LTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGA
                     RRLHTVLERLMEEISYDASDLSGQNITIDADYVSKRLDALVADEDLSRFIL"
     gene            7452..8378
                     /gene="menA"
                     /locus_tag="JNZ57_002290"
     CDS             7452..8378
                     /gene="menA"
                     /locus_tag="JNZ57_002290"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HAY8828500.1"
                     /translation="MTEQQISRTQAWLESLRPKTLPLAFAAIIVGTALAWWQGHFDPL
                     VALLALITAGLLQILSNLANDYGDAVKGSDKPDRIGPLRGMQKGVITQQEMKRALIIT
                     VVLICLSGLALVAVACHTLADFVGFLILGGLSIIAAITYTVGNRPYGYIGLGDISVLV
                     FFGWLSVMGSWYLQAHTLIPALILPATACGLLATAVLNINNLRDINSDRENGKNTLVV
                     RLGEVNARRYHACLLMGSLVCLALFNLFSLHSLWGWLFLLAAPLLVKQARYVMREMDP
                     VAMRPMLERTVKGALLTNLLFILGIFLSQWAA"
     gene            8471..8956
                     /gene="rraA"
                     /locus_tag="JNZ57_002291"
     CDS             8471..8956
                     /gene="rraA"
                     /locus_tag="JNZ57_002291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001392924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E activity regulator RraA"
                     /protein_id="HAY8828501.1"
                     /translation="MKYDTSELCDIYQEDVNVVEPLFSNFGGRASFGGQIITVKCFED
                     NGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDL
                     EELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI
                     E"
     gene            complement(9041..9286)
                     /gene="zapB"
                     /locus_tag="JNZ57_002292"
     CDS             complement(9041..9286)
                     /gene="zapB"
                     /locus_tag="JNZ57_002292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring assembly protein ZapB"
                     /protein_id="HAY8828502.1"
                     /translation="MTMSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQ
                     NAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV"
     gene            9712..10557
                     /gene="glpF"
                     /locus_tag="JNZ57_002293"
     CDS             9712..10557
                     /gene="glpF"
                     /locus_tag="JNZ57_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol uptake facilitator protein GlpF"
                     /protein_id="HAY8828503.1"
                     /translation="MSQTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGLWEI
                     SVIWGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAA
                     LVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILM
                     GLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAG
                     WGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRHLPCDICVVEEKETTTPSE
                     QKASL"
     gene            10580..12088
                     /gene="glpK"
                     /locus_tag="JNZ57_002294"
     CDS             10580..12088
                     /gene="glpK"
                     /locus_tag="JNZ57_002294"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HAY8828504.1"
                     /translation="MTEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPG
                     WVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAI
                     VWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGE
                     LLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLGWDDKMLEVLDIPREMLPEV
                     RRSSEVYGQTNIGGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNT
                     GEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFA
                     TKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDV
                     LEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGL
                     AVGFWQNLDELQEKAVIEREFRPGIETTERNYRYAGWKKAVKRAMAWEKHDE"
     gene            12223..13233
                     /gene="glpX"
                     /locus_tag="JNZ57_002295"
     CDS             12223..13233
                     /gene="glpX"
                     /locus_tag="JNZ57_002295"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HAY8828505.1"
                     /translation="MRRELAIEFSRVTESAALAGYKWLGRGDKNTADGAAVNAMRIML
                     NQVNIDGTIVIGEGEIDEAPMLYIGEKVGTGRGDAVDIAVDPIEGTRMTAMGQANALA
                     VLAVGDKGCFLNAPDMYMEKLIVGPGAKGTIDLNLPLADNLRNVAAALGKPLSELTVT
                     ILAKPRHDAVIAEMQQLGVRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSA
                     AVIRALDGDMNGRLLARHDVKGDNEENRRIGEQELARCKAMGIEAGKVLRLGDMARSD
                     NVIFSATGITKGDLLEGISRKGNIATTETLLIRGKSRTIRRIQSIHYLDRKDPEMQVH
                     IL"
     gene            13330..14076
                     /gene="fpr"
                     /locus_tag="JNZ57_002296"
     CDS             13330..14076
                     /gene="fpr"
                     /locus_tag="JNZ57_002296"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP(+) reductase"
                     /protein_id="HAY8828506.1"
                     /translation="MADWVTGKVTKVQNWTDALFSLTVHAPVLPFTAGQFTKLGLEID
                     GERVQRAYSYVNSPDNPDLEFYLVTVPDGKLSPRLAALKPGDEVQVVSEAAGFFVLDE
                     VPDCETLWMLATGTAIGPYLSILQLGKDLDRFKNLVLVHAARYAADLSYLPLMQELEK
                     RYEGKLRIQTVVSRETAAGSLTGRIPALIESEELESAIGLPMNKETSHVMLCGNPQMV
                     RDTQQLLKETRQMTKHLRRRPGHMTAEHYW"
     gene            complement(14081..14509)
                     /gene="uspD"
                     /locus_tag="JNZ57_002297"
     CDS             complement(14081..14509)
                     /gene="uspD"
                     /locus_tag="JNZ57_002297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspD"
                     /protein_id="HAY8828507.1"
                     /translation="MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLS
                     ELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKE
                     QCDLLVCGHHHSFINRLMPAYRGMINKMSADLLIVPFIDK"
     gene            complement(14536..14835)
                     /locus_tag="JNZ57_002298"
     CDS             complement(14536..14835)
                     /locus_tag="JNZ57_002298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF406 domain-containing protein"
                     /protein_id="HAY8828508.1"
                     /translation="MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFM
                     TKLKELAAAASSADEGASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA"
BASE COUNT         3637 a         3878 c         4063 g         3521 t
ORIGIN      
        1 agtgactcgc tgcggctgta accgtcctca ccgggaaaca ggtgctcaaa atacaggctt
       61 ctgccgccgt tatcactgag tatcagtgtg ttatcgcgca gctgtaagcg gatatccgca
      121 ggcattttcc agccggggcc gaggctcccc accggcgcgg gcgtttttgt ccggtaactg
      181 ctgtaggtgc gggagaggat gaacggcagc ggggcgggca gggcaaggtc tgtctcgccg
      241 ggaaggacct ttgcaccgag cagcggattg accggatggc cggacgtcac cccgccgggg
      301 cacactgaac aggccacgcc ggtgggggca ccaatgcgca ccccggctga accctgaaca
      361 atgctaccgc catactgcgt catgtcgccc tgacgcgccg ccggtttttc gctcatcgta
      421 aaatcctttt gaaataaata agaaccagaa gcctagcgcc agtcaacaac aggaaatgat
      481 aatgagttaa caccccggaa tttttcagaa tttataaaag gcaaaattca ggcacaaaaa
      541 aagcgccgtg cggcgctttt ttcggaaatc cggtcttatt tgctgcccgg gatgttgaaa
      601 cgcttgttga agcggtcaac acggccaccg gtagcaacat cacgctgttt gccagtgaag
      661 aacgggtggc acttgctgca cacgtcgagg ttcaggtcat gaccaacagt ggagcggatt
      721 ttcattacgt taccgcaaga gcagctagca gtaatttctt cgtatttcgg gtgaatatct
      781 tttttcatgg gaaaacctcg gtttaaggcc gcgtcgctct tccagcccta acgccagaca
      841 ccacgcgatg ttaaaagtat agcttcaata cgatcatttc gtacgaaggc gcgaaatcat
      901 acagaaatta accagcgtat gcaaactgat ccgcactctt ctacggcaat gtgtatacta
      961 acccaccgaa tttcaagtca ggatgatgct atgcccgttg cccacgttgc cttgcccgtt
     1021 ccgcttcctc gtacctttga ctatctgctg ccagaaggca tgacggttaa agccgggtgt
     1081 cgcgtgcgcg tgccgtttgg caaacaacag gagcgcatcg gggttgtggt gtcagttagc
     1141 gatgtcagtg agctgccgct taacgagctg aaagcggtag tggaagtgct ggacgttgag
     1201 ccggtattta ctcactccgt ctggcggtta ctgctctggg cggcagatta ctatcatcat
     1261 ccgattggcg atgtgctgtt tcatgccttg ccgattttac tgcgccaggg gcggcctgcg
     1321 gcgaacgcgc cgatgtggta ctggtttgcc actgaacaag gccaggcggt ggatctgaac
     1381 agcctgaaac gctcccccaa gcaacaacag gcgctggcgg cgttacggca aggcaaaatc
     1441 tggcgcgacc aggtcgccac gctcgaattt aatgatgccg cgttgcaggc gctacgcaaa
     1501 aaaggtctgt gtgatttagc aagtgaaaca ccagagttta gcgactggcg aacgaactat
     1561 gccgtttctg gtgagcggtt gcgattgaat accgaacagg ccaccgccgt tggcgcaatt
     1621 catagcgcgg cagatacttt ttctgcctgg ctgctggcgg gcgttaccgg ttccggtaaa
     1681 acggaggttt atctcagtgt actggaaaac gtgctcgctc agggcaaaca ggcgctggtg
     1741 atggtgccgg aaatcggcct gacaccgcaa actatcgccc gttttcgtga acgttttaat
     1801 gcccccgtgg aagttctgca ttccggcctg aacgacagcg agcggctttc ggcgtggttg
     1861 aaagcgaaaa atggcgaggc ggcgattgtg atcggcaccc gctccgcgct gtttacgccg
     1921 tttaaaaatc tcggcgtgat tgtcattgat gaagagcacg acagctccta caagcagcag
     1981 gaaggctggc gctatcatgc ccgcgacctg gcggtgtatc gtgcgcacag cgagcaaatc
     2041 ccgattattc ttggctccgc aacgcccgcg ctggaaacgt tatgcaacgt ccagcagaaa
     2101 aaataccgcc tgctgcgcct gacccgtcgg gcagggaatg cgcgtccggc aattcaacat
     2161 gtgctggatt taaaaggtca gaaggtgcag gcaggtctgg ctccggcgtt aatcacccgt
     2221 atgcgccagc atttacaggc caacaatcag gttatcctct ttcttaatcg tcggggtttt
     2281 gcgcctgcgc tgctgtgcca cgactgcggc tggatagccg aatgcccacg ttgcgatcac
     2341 tactacacgc tgcatcaggc gcaacagcat ttgcactgtc accactgtga cagtcagcgt
     2401 ccggtgccgc gccagtgccc ttcctgcggt tccacgcacc tggtccccgt ggggctgggc
     2461 accgaacagc ttgaacagac gcttgcgccg atgttccccg gcgtgcccat ttcacgtatc
     2521 gaccgcgata ccaccagccg caaaggggcg ctggaacagc aactggcgaa agtgcatcgc
     2581 ggcggcgcga ggattttgat cggcacacaa atgctggcga aaggtcacca ctttccggat
     2641 gtgacgctgg tggcgttact ggatgtggac ggcgcgctgt tttctgccga ttttcgctcg
     2701 gcagaacgtt tcgcccagct ttacacccag gtcgccggtc gtgccgggcg tgcgggtaaa
     2761 cagggcgaag tggtgctgca aacgtaccat ccggaacatc ctctgttgca aacgttgctc
     2821 tataaaggct acgacgcctt tgccgaacag gcgctggctg agcgacgcat gatgcagctg
     2881 ccgccgtgga ccagccatgt gattgtgcgt gcggaagatc ataacaatca gcacgcgccg
     2941 ctgttcctgc aacaactgcg taatctgatc ctttccagcc cgctggcaga cgacaaactg
     3001 tggattctcg gcccggttcc ggctctggca cctaagcgtg gtggccgctg gcgctggcag
     3061 atcttgttgc agcacccttc ccgcgtgcgc ttgcaacaca tcattagtgg tacgctggcg
     3121 cttattaata caataccgga ttcccgcaag gtgaaatggg tgttggatgt cgatcccatc
     3181 gaaggctaat gcgcaaacgt tgcgaggcgg atcgaaaaat tcaatattca tcacactttt
     3241 catgaaaatt ctgtaaccgt tttcacgcgc tatctgctaa aaatgttgcc gatgtgaagt
     3301 aaacatggat gtagtacgcc tgacgtacca ggcgaggagt gagtgtgaaa gcgaagaagc
     3361 aggaaactgc cgcgaccatg aaagacgttg ccctcaaggc aaaagtctct acagcgactg
     3421 tctcccgagc attaatgaat cccgataaag tctcccaggc cacccgtaat cgggttgaaa
     3481 aagcggcccg ggaagtgggt tatttaccgc agcctatggg gcgcaacgtc aagcgtaatg
     3541 aatcccgcac cattctggtg attgtcccgg atatctgcga tcccttcttt agcgaaatta
     3601 ttcgcggtat cgaagttacg gcggcaaatc acggatatct ggtgctgatt ggcgactgtg
     3661 cgcatcaaaa tcagcaggaa aaaaccttta tcgatttgat catcaccaag caaattgatg
     3721 gcatgttgct gctgggttca aggctgccgt ttgatgccag cattgaggaa cagcgtaatc
     3781 tgccgccgat ggtgatggcg aacgaatttg caccggaact ggagctgcct accgttcata
     3841 tcgacaatct gaccgccgca tttgatgcag taaattattt atatgagcaa gggcataaac
     3901 ggattggctg tatagccggt cccgaagaga tgccactgtg tcactaccgc ctgcaaggct
     3961 atgttcaggc gctgcgtcgc tgcggaatta tggttgatcc acaatacatc gcccgtggcg
     4021 acttcacctt cgaagccgga agcaaagcaa tgcaacagct gcttgatctt ccacaaccgc
     4081 ctactgcagt cttctgccat agcgatgtga tggcgctcgg cgcactttct caggcaaaac
     4141 gccaggggct gaaagtcccg gaagaccttt ccataatcgg ttttgataac atcgacctga
     4201 cgcaattttg tgatccgccg ctgacaacca tcgcgcagcc gcgttacgaa atcggtcggg
     4261 aagctatgct gttattgctt gatcaaatgc aggggcaaca cgttggcagt ggctctcgtt
     4321 taatggactg cgaacttatc atccggggat caacacgcgc gttaccttaa agtaaacctt
     4381 taagactgcc gtgactggtc aaaggcccgc cgcttaagta acatggcggg ctgacgaacg
     4441 aataaataca gcgaaacgat agtggcacaa cgagattatg tacgccgcag ccaaccggca
     4501 ccttcgcggc gaaaaaagag cacctcacgg aaaaagcaac gaaatctgcc tgcggtttct
     4561 cccgctatgg tcgctattgc tgccgccgtt cttgtgacct ttatcggtgg tctgtacttc
     4621 attacgcatc acaagaaaga agagtccgag acgctgcaaa gccagaaagt gaccggaaac
     4681 ggactaccac caaaaccaga agaacgctgg cgctacatta aagagctgga aagtcgccag
     4741 ccgggtgtgc gtgcgcccac agaaccttct gccggtggtg aagtgaaaac gccggagcaa
     4801 ctgacaccag aacaacgtca gcttcttgaa caaatgcagg ctgatatgcg ccagcagcca
     4861 acgcagctgg ttgaggttcc gtggaatgaa cagacgccgg aacagcgtca gcaaacgcta
     4921 caacgccagc gtcaggcgca gcaattagcg gagcagcaac gcctggctca gcagtcgcgt
     4981 acgactgaac aaagctggca gcagcagacg cgtacgtcgc aagccgcgcc ggtacaggcg
     5041 caaccgcgcc agtctaaacc agcttctact cagcagccgt accaggatct gctgcaaacc
     5101 cctgcgcaca cgaccgcgca gtcgaagccg cagcaagctg cgccggttgc tcgtgccgct
     5161 gacgcgccaa aaccgacggc ggagaaaaaa gacgaacgcc gctggatggt gcagtgcggt
     5221 tcgttcagag gcgcggaaca ggcagagacg gtacgtgctc agctggcgtt cgaaggattt
     5281 gactcgaaaa tcaccaccaa caatggctgg aatcgtgtgg tcattggccc ggtgaaaggc
     5341 aaagagaacg cagacagcac cctcaatcgg ttgaagatgg cgggtcatac aaactgcatt
     5401 cggctcgccg ccgggggttg aaaccctcaa aatccccccc atctataatt gcattatgcc
     5461 ccgtactttt gtacggggtt tgtactctgt attcgtaacc aaggggtcag ctcgtgacaa
     5521 ctatagtaag cgtacgccgt aacggccatg tggtcatcgc tggtgatggt caggccacgt
     5581 tgggcaatac cgtaatgaaa ggcaacgtga aaaaggtccg ccgtctgtac aacgacaaag
     5641 tcatcgcggg ctttgcgggc ggtactgcgg atgcttttac gctgttcgaa ctgtttgaac
     5701 gtaaactgga aatgcatcag ggccatctgg ttaaagccgc cgttgagctg gcaaaagact
     5761 ggcgtaccga tcgcatgctg cgcaaacttg aagcactgct ggcagtcgcg gatgaaactg
     5821 catcgcttat catcaccggt aacggtgacg tggtgcagcc agaaaacgat cttattgcta
     5881 tcggctccgg cggcccttac gcccaggctg cggcgcgcgc gctgttagaa aacactgaac
     5941 ttagcgcccg tgaaattgct gaaaaggcgt tggatattgc aggcgacatt tgcatctata
     6001 ccaaccattt ccacaccatc gaagaattaa gctacaaagc gtaaggatct cccatgtctg
     6061 aaatgacccc acgcgaaatc gtcagcgaac tggataagca catcatcggc caggacaacg
     6121 ccaagcgttc tgtggcgatt gctctgcgta accgctggcg tcgcatgcag ctcaacgaag
     6181 agctgcgcca tgaagtgacc ccgaaaaata tcctgatgat cggcccgacc ggtgtcggta
     6241 aaactgaaat cgcccgtcgt ctggctaagc tggcgaatgc gccgttcatc aaagttgaag
     6301 cgaccaaatt caccgaagtg ggctatgtcg gtaaggaagt ggattctatt attcgcgatc
     6361 tgaccgatgc cgccgtgaaa atggtacgcg tccaggctat cgagaaaaac cgttatcgcg
     6421 ctgaagaact ggcagaagaa cgtattctcg acgtgctgat cccacctgct aaaaacaact
     6481 ggggacagac cgaacagcag caggaaccgt ccgctgctcg tcaggcattc cgcaaaaaac
     6541 tgcgtgaagg ccagcttgat gacaaagaaa tcgagatcga tcttgccgca gcaccgatgg
     6601 gcgttgaaat tatggctcct ccaggcatgg aagagatgac cagccagctg cagtccatgt
     6661 tccagaacct gggcggccag aagcaaaaag cgcgtaagct gaaaatcaaa gatgccatga
     6721 agctgctgat tgaagaagaa gcggcgaaac tggtgaaccc ggaagagctg aagcaagacg
     6781 ctatcgacgc tgttgagcag cacgggatcg tgtttatcga cgaaatcgac aaaatctgta
     6841 agcgcggcga gtcttccggt ccggatgttt ctcgtgaagg cgttcagcgt gacctgctgc
     6901 cgctggtaga aggttgcacc gtttccacca aacacgggat ggtcaaaact gaccacattc
     6961 tgtttatcgc ttctggcgcg ttccagattg cgaaaccgtc tgacctaatc ccggaactgc
     7021 aaggtcgtct gccaatccgc gttgaactgc aggcactgac caccagcgac ttcgagcgta
     7081 ttctgaccga gccgaatgcc tctatcaccg tgcagtacaa agcactgatg gcgactgaag
     7141 gcgtaaatat cgagtttacc gactccggta ttaaacgcat cgcggaagcg gcatggcagg
     7201 tgaacgaatc taccgaaaac atcggtgctc gtcgtttaca cactgttctg gagcgtttaa
     7261 tggaagagat ttcctacgac gccagcgatt taagcggtca aaatatcact attgacgcag
     7321 attatgtgag caaacgtctg gatgcgttgg tggcagatga agatctgagc cgttttatcc
     7381 tataatcgcg ttcaatcatt ttcatcattg tttgatgggg ctgaaaggcc ccatttttat
     7441 tggcgcgtat tatgactgaa caacaaatta gccgaactca ggcgtggctg gaaagtttac
     7501 gacctaaaac cctccccctc gcctttgctg caattatcgt cgggacggcg ctggcatggt
     7561 ggcaaggtca ttttgatccg ctggtcgccc tgctggcact gattaccgcc gggctattac
     7621 agatcctttc taacctcgcc aatgattacg gcgatgcggt aaaaggcagc gataaacctg
     7681 accgcattgg gccgctacgc ggcatgcaaa aaggggtcat tacccagcaa gagatgaaac
     7741 gggcgctcat tattaccgtc gtgctcatct gtctctccgg gctggcactg gttgcagtgg
     7801 cgtgccatac gctggctgat tttgtcggtt tcctgattct tggcgggttg tcgatcattg
     7861 ccgctatcac ctacaccgtg ggcaatcgtc cttatggtta tatcggtctg ggggatattt
     7921 ccgtactggt tttctttggc tggttaagcg tcatggggag ctggtattta caggctcata
     7981 cattgattcc ggcactgatc cttccggcga ccgcatgcgg cctgctggca acggcagtac
     8041 tgaacattaa taacctgcgt gatatcaata gcgaccgcga aaacggcaaa aacacgctgg
     8101 tggtgcgctt aggtgaagtg aacgcgcgtc gttatcatgc ctgcctgctg atgggctctc
     8161 tggtatgtct ggcgctgttt aatctctttt cgctgcatag cctgtggggc tggctgttcc
     8221 tgctggcggc accgttgctg gtgaagcaag cccgttatgt gatgcgggaa atggacccgg
     8281 tggcgatgcg accgatgctg gaacgcactg tcaagggggc gttactgact aacctgctgt
     8341 ttattttagg gatattccta agccagtggg cagcataact gacaaatatc aattaacaat
     8401 tgatgatttt gccaacagcc cacatagcgc gatatactga aaattctcgc agcaactgaa
     8461 tgttaagcct atgaaatacg atacttccga gctttgtgac atctatcaag aagatgttaa
     8521 cgtcgtggaa ccgctgttct ccaactttgg cggacgggcg tcgtttggcg gacaaataat
     8581 cacggtaaaa tgtttcgagg acaacgggtt gctgtacgat ctgctcgaac agaatggccg
     8641 tggtcgtgtt cttgtcgtcg atggcggtgg ttctgttcgt cgcgcactgg tcgatgctga
     8701 actggcgcgt ctggcagtac aaaatgaatg ggaaggtctg gttatttacg gcgcggtgcg
     8761 tcaggtagat gacctggaag agttggatat cggcatccag gcgatggcgg caattccggt
     8821 tggtgccgct ggcgaaggca ttggcgaaag cgatgtccgc gtcaattttg gcggtgtaac
     8881 cttcttctcc ggcgaccatc tttatgccga caataccggg attattcttt cagaagatcc
     8941 gctggatatt gaatgataag aaaggcaccg caaggtgcct tttttctgcg ttacctgttg
     9001 gcctacacag taaagaaatt acgcgaaaga tgaagcgtaa tcagacctct tccatgcgac
     9061 ccagcagggc ctgcagacgt tcctgccagc cgttctgctg ttctttcaga tggttgttct
     9121 cacgctccag ctcttcgcgc tgatgctggg cattttgaac ttcctgcgac agtgagttgt
     9181 ttttttcttt cagctcttcg atttccatct gcaacagagt gatggtatca atcgcctgct
     9241 gtacttttgc ttccagtttc tcaaacactt ctaatgacat tgtcatacct ctcctgaatt
     9301 gcaaggcgtt gatggataaa aaatcctcgt cccgattacc ggtgacgcct taataaatac
     9361 gagcgcactt tagttagctc cgattgtatg aagccgcgcc atcgctgtcc agcggcacgc
     9421 cttgcagatt acggtttgcc acacttttca tccttctcct ggtgacataa tccacatcaa
     9481 tcgaaaatgt taataaattt gttgcgcgaa tgatctaaca aacatgcatc atgtacaatc
     9541 agatggaata aatggcgcga taacgctcat tttatgacga agcacacaca ttttaagttc
     9601 gatatttctc gtttttgctc gttaacgata agtttacagc atgcctacaa gcatcgtgga
     9661 ggtccgtgac tttcacgcat acaacaaaca ttaactcttc aggatccgat tatgagtcaa
     9721 acatcaacct tgaaaggcca gtgcattgct gaattcctcg gtaccgggtt gttgattttt
     9781 ttcggtgtgg gttgcgttgc agcactaaaa gtcgctggtg cgtcttttgg tctgtgggaa
     9841 atcagtgtca tttggggact gggggtggca atggctatct acctgaccgc aggggtttcc
     9901 ggcgcgcatc ttaatcccgc tgttaccatt gcattgtggc tgtttgcctg tttcgacaag
     9961 cgcaaagtta ttccttttat cgtttcacaa gttgccggcg ctttctgtgc tgcggcttta
    10021 gtttacgggc tttactacaa tttatttttc gacttcgagc agactcatca cattgttcgc
    10081 ggcagcgttg aaagtgttga tctggcaggc actttctcta cttaccctaa tcctcatatc
    10141 aattttgtgc aggctttcgc agttgagatg gtgattaccg ctattctgat ggggctgatc
    10201 ctggcgttaa cggacgatgg caacggtgta ccacgcggcc ctttggctcc cttgctgatt
    10261 ggtctactga ttgcggtcat tggcgcatct atgggcccat tgacgggttt tgccatgaac
    10321 ccagcgcgtg acttcggtcc gaaagtcttt gcctggctgg cgggctgggg caatgtcgcc
    10381 tttaccggcg gcagagacat tccttacttc ctggtgccgc tttttggccc tatcgttggc
    10441 gcgattgtag gtgcatttgc ctaccgcaaa ctgattggtc gccatttgcc ttgcgatatc
    10501 tgtgttgtgg aagaaaagga aaccacaact ccttcagaac aaaaagcttc gctgtaatat
    10561 gactacggga caattaaaca tgactgaaaa aaaatatatc gttgcgctcg accagggcac
    10621 caccagctcc cgcgcggtcg taatggatca cgatgccaat atcattagcg tgtcgcagcg
    10681 cgaatttgag caaatctacc caaaaccagg ttgggtagaa cacgacccaa tggaaatctg
    10741 ggccacccaa agctccacgc tggtagaagt gctggcgaaa gccgatatca gttccgatca
    10801 aattgcagct atcggtatta cgaaccagcg tgaaaccact attgtctggg aaaaagaaac
    10861 cggcaagcct atctataacg ccattgtctg gcagtgccgt cgtaccgcag aaatctgcga
    10921 gcatttaaaa cgtgacggtt tagaagatta tatccgcagc aataccggtc tggtgattga
    10981 cccgtacttt tctggcacca aagtgaagtg gatcctcgac catgtggaag gctctcgcga
    11041 gcgtgcacgt cgtggtgaat tgctgtttgg tacggttgat acgtggctta tctggaaaat
    11101 gactcagggc cgtgtccatg tgaccgatta caccaacgcc tctcgtacca tgttgttcaa
    11161 catccatacc ctaggctggg acgacaaaat gctggaagtg ctggatattc cgcgcgagat
    11221 gctgccagaa gtgcgtcgtt cttccgaagt atacggtcag actaacattg gcggcaaagg
    11281 cggcacgcgt attccaatct ccgggatcgc cggtgaccag caggccgcgc tgtttggtca
    11341 gttgtgcgtg aaagaaggga tggcgaagaa cacctatggc actggctgct ttatgctgat
    11401 gaacactggc gagaaagcgg tgaaatcaga aaacggcctg ctgaccacca tcgcctgtgg
    11461 cccgactggc gaagtgaact atgcgttgga aggtgcggtg tttatggcag gcgcatccat
    11521 tcagtggctg cgcgatgaga tgaagttgat taacgacgcc tacgattccg aatatttcgc
    11581 caccaaagtg caaaacacca atggtgtgta tgtggttccg gcatttaccg ggctgggtgc
    11641 gccgtactgg gacccgtatg cgcgcggggc gattttcggt ctgactcgtg gggtgaacgc
    11701 taaccacatt atacgcgcga cgctggagtc tattgcttat cagacgcgtg acgtgctgga
    11761 agcgatgcag gccgactctg gtatccgtct gcacgccctg cgcgtggatg gtggcgcagt
    11821 agcaaacaat ttcctgatgc agttccagtc cgatattctc ggcacccgcg ttgagcgccc
    11881 ggaagtgcgc gaagtcaccg cattgggtgc ggcctatctc gcaggcctgg cggttggctt
    11941 ctggcagaac ctcgacgagc tgcaagagaa agcggtgatt gagcgcgagt tccgtccagg
    12001 catcgaaacc actgagcgta attaccgtta cgcaggctgg aaaaaagcgg tcaaacgcgc
    12061 gatggcgtgg gaaaaacacg acgagtaatg taaatgccgg atgaagcgtt tatgccgcat
    12121 ccggtagtcc tgaaacgtgc gggggcaacc ccgcacacat caataatccc acccttcccc
    12181 tgtgctacac ttcgcgccat tccttactgc ttagagtttg ctatgagacg agaacttgcc
    12241 atcgaatttt cccgcgtcac cgaatctgcg gcgctggctg gctacaaatg gttaggacgc
    12301 ggcgataaaa acaccgcgga cggcgcggcg gtaaacgcca tgcgtattat gctcaaccag
    12361 gtcaacattg acggcaccat cgtcattggt gaaggtgaaa tcgacgaagc accgatgctc
    12421 tacattggtg aaaaagtcgg tactggtcgc ggcgacgcgg tagatattgc tgttgatccg
    12481 attgaaggca cgcgcatgac ggcgatgggc caggctaacg cgctggcggt gctggcagta
    12541 ggcgataaag gctgcttcct caatgcgccg gatatgtata tggagaagct gattgtcggg
    12601 ccgggagcca aaggcaccat tgatctgaac ctgccgctgg cggataacct gcgcaatgta
    12661 gcggcggcgc tcggcaaacc gttgagcgaa ctgacggtaa cgattctagc taaaccacgc
    12721 cacgatgccg ttatcgctga aatgcagcaa ctcggcgtac gcgtatttgc tattccggat
    12781 ggcgacgttg cggcctcaat tctcacctgt atgccagaca gcgaagttga cgtgctgtac
    12841 ggtattggtg gcgcgccgga aggcgtagtt tctgcggcgg tgatccgcgc attagatggc
    12901 gacatgaacg gtcgtctgct ggcgcgtcat gacgtcaaag gcgacaacga agagaatcgt
    12961 cgcattggcg agcaggagct ggcacgctgc aaagcgatgg gcatcgaagc cggtaaagta
    13021 ttgcgcctgg gcgatatggc gcgcagcgat aacgtcatct tctctgccac cggtattacc
    13081 aaaggcgatc tgctggaagg cattagccgc aaaggcaata tcgcgactac cgaaacgctg
    13141 ctgatccgcg gcaagtcacg caccattcgc cgcattcagt ccatccacta tctggatcgc
    13201 aaagacccgg aaatgcaggt gcacatcctc tgattggttt gatcgattga gccttccagt
    13261 ccttcgggac tggaattttt ttgttcggag aacgaagata aggcaagtca atcaaaacag
    13321 gagaaaaaca tggctgattg ggtaacaggc aaagtcacta aagtgcagaa ctggaccgac
    13381 gccctgttta gtctcaccgt tcacgccccc gtgcttccgt ttaccgccgg gcaattcacc
    13441 aagcttggcc ttgaaatcga cggcgaacgc gtccagcgcg cctactccta tgttaactcg
    13501 cccgataatc ccgatctgga gttttacctg gtcaccgtcc ccgatggcaa attaagccca
    13561 cgattggcgg cactgaaacc aggcgatgaa gtgcaggtgg ttagcgaagc agctggcttc
    13621 tttgttctgg atgaagtacc agattgcgaa acgctatgga tgctggcaac cggtacagcg
    13681 attggccctt atttatcgat tctgcaacta ggcaaagatt tagatcgctt caaaaatctg
    13741 gtcctggttc acgccgcacg ttatgccgcc gacttaagct atttgccact gatgcaagaa
    13801 ctggaaaaac gctacgaagg caaactgcgc attcagacgg tggtcagtcg ggaaacggca
    13861 gcggggtcgc tcaccggacg gataccggca ttaattgaaa gtgaggaact ggaaagcgcg
    13921 attggcctgc cgatgaataa agaaaccagc catgtgatgc tgtgcggcaa tccacagatg
    13981 gtgcgcgata cacaacagtt gctgaaagag acccggcaga tgacgaaaca tttacgtcgc
    14041 cgaccgggcc atatgacagc ggagcattac tggtaagcgg ttacttatcg ataaacggca
    14101 cgatgagcaa atccgcactc atcttattga tcatcccgcg atatgccggc atcaaacggt
    14161 tgataaatga gtgatgatga ccacagacaa ggaggtcgca ctgctctttt tgcataattt
    14221 ccagcagtgt ttccggcatt tctccgcgtt caatacgcag ttttgtcttc ggccattgaa
    14281 tatttttcgt cagtttatac agcttgttat ccgacttatt cttcaacaat tgaagaatat
    14341 cttctgttgc agggaagtag atacccggat acaactcgct taagccatca tcaatatgaa
    14401 ttaacgtcag gtgagcgtca ttatgtctgg cgagctccag agctttattc accagtaagg
    14461 catcttcttc attcccggaa attgccacgc caatgtgttt ataagccatg tttaactcct
    14521 tctaaagcaa ctccatcaag ctaacgaacg cagtgataac tcaaaaataa tcatctcggc
    14581 ctggcatgag aaagtgaagg ccgcatcaag ctcaacttgc ccctccagat ccttaatctt
    14641 gtaggccacg ctggcccctt catctgcaga ggatgcagcg gcggcaagct ctttcagttt
    14701 ggtcataaaa gactctgctt cttcgcgggt ggcaaaaaag cgcgaaaact tactggtaca
    14761 gttgtcgtta tcaatcaccg taccgatatc aatcgcacat cctttagtac tgcatttatc
    14821 tacgacatct ttcatagggc acctctgtat attcgcctct ctgtcgatta cgacttaaga
    14881 ataatgcgcc gttaagggaa gaacaaacaa gtaatgatct tatggattac catttttttg
    14941 atattgctta aggtgaagag ttcagaagga ttttccgggt attgtcattt gcatcgtgga
    15001 aataacaatc ccggaaaaaa atagcagtaa gagatatatt aaaggttaat tacttgattt
    15061 attgtcggct ttatacttca catcctgagt atctttacc
//
LOCUS       DADMHC010000090        14927 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.090, whole genome shotgun sequence.
ACCESSION   DADMHC010000090 DADMHC010000000
VERSION     DADMHC010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14927)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14927)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14927
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.090"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..180
                     /locus_tag="JNZ57_002299"
     CDS             <1..180
                     /locus_tag="JNZ57_002299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016247257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HAY8828509.1"
                     /translation="KEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLL
                     REAGFSSSPQGLDWG"
     gene            complement(231..578)
                     /gene="grxD"
                     /locus_tag="JNZ57_002300"
     CDS             complement(231..578)
                     /gene="grxD"
                     /locus_tag="JNZ57_002300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monothiol glutaredoxin 4"
                     /protein_id="HAY8828510.1"
                     /translation="MSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACG
                     ERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKE
                     TAAKYKSEEPDAE"
     gene            912..1727
                     /locus_tag="JNZ57_002301"
     CDS             912..1727
                     /locus_tag="JNZ57_002301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HAY8828511.1"
                     /translation="MARINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKA
                     DKKKSTATTKKTQKTAKKAASKSTTKSKTASSVKKSSITASKNAKTRSKHAVNKTASA
                     SFTEKCTKRKGYKSHCVKVKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYRWGG
                     SSPRTGFDCSGLVYYAYKDLVKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQG
                     RGTADHVGVYVGNGKFIQSPRTGQEIQITSLSEDYWQRHYVGARRVMTPKTLR"
     gene            1855..2436
                     /gene="sodB"
                     /locus_tag="JNZ57_002302"
     CDS             1855..2436
                     /gene="sodB"
                     /locus_tag="JNZ57_002302"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020079002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Fe]"
                     /protein_id="HAY8828512.1"
                     /translation="MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIK
                     GTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFG
                     SFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWE
                     HAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA"
     gene            complement(2582..3751)
                     /locus_tag="JNZ57_002303"
     CDS             complement(2582..3751)
                     /locus_tag="JNZ57_002303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8828513.1"
                     /translation="MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGM
                     LISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRIL
                     TSLNHGAFFGLGSVVAASVEPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRM
                     SFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMF
                     TLYTYIYPVLQSITHATPVFVTAMLVLIGVGFSIGNYPGGKLADRSVNGTLKGFLLLL
                     MVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAF
                     NLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS"
     gene            complement(3917..4006)
                     /gene="ynhF"
                     /locus_tag="JNZ57_002304"
     CDS             complement(3917..4006)
                     /gene="ynhF"
                     /locus_tag="JNZ57_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein YnhF"
                     /protein_id="HAY8828514.1"
                     /translation="MSTDLKFSLVTTIIVLGLIVAVGLTAALH"
     gene            4305..5330
                     /gene="purR"
                     /locus_tag="JNZ57_002305"
     CDS             4305..5330
                     /gene="purR"
                     /locus_tag="JNZ57_002305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor PurR"
                     /protein_id="HAY8828515.1"
                     /translation="MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELH
                     YSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLE
                     KQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVID
                     NAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQ
                     GDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDN
                     VRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADG
                     PFRDYRR"
     gene            complement(5327..6259)
                     /locus_tag="JNZ57_002306"
     CDS             complement(5327..6259)
                     /locus_tag="JNZ57_002306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8828516.1"
                     /translation="MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWL
                     AVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIV
                     RPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAF
                     RDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKR
                     VVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQND
                     MSPALTWLLEYLGDSETLNKEWLREPEETPATGD"
     gene            6372..7583
                     /locus_tag="JNZ57_002307"
     CDS             6372..7583
                     /locus_tag="JNZ57_002307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bcr/CflA family multidrug efflux MFS
                     transporter"
                     /protein_id="HAY8828517.1"
                     /translation="MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVS
                     ASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRF
                     VQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQ
                     AIFATLFAITVVLILPIFWLKPTTKAGNNSQDGLTFTDLLRSKTYRGNVLIYAACSAS
                     FFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLV
                     LFAVSVIATWTAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAA
                     LQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEAGCQNH
                     GNAEVAHSESH"
     gene            7874..9022
                     /gene="cfa"
                     /locus_tag="JNZ57_002308"
     CDS             7874..9022
                     /gene="cfa"
                     /locus_tag="JNZ57_002308"
                     /EC_number="2.1.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane fatty acyl phospholipid synthase"
                     /protein_id="HAY8828518.1"
                     /translation="MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNP
                     DFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGAR
                     LFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMIC
                     EKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSMVGVTISAEQQKMAQERCEGLDVTIL
                     LQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLN
                     VDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPE
                     IADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR"
     gene            complement(9062..9703)
                     /gene="ribE"
                     /locus_tag="JNZ57_002309"
     CDS             complement(9062..9703)
                     /gene="ribE"
                     /locus_tag="JNZ57_002309"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HAY8828519.1"
                     /translation="MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAH
                     NGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGH
                     IMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVH
                     LIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA"
     gene            9918..11291
                     /gene="mdtK"
                     /locus_tag="JNZ57_002310"
     CDS             9918..11291
                     /gene="mdtK"
                     /locus_tag="JNZ57_002310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter MdtK"
                     /protein_id="HAY8828520.1"
                     /translation="MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDM
                     AAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLI
                     MLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPG
                     MVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSM
                     RDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQI
                     ALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTV
                     SLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITF
                     TAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSVI
                     ILQRASR"
     gene            complement(11332..12588)
                     /locus_tag="JNZ57_002311"
     CDS             complement(11332..12588)
                     /locus_tag="JNZ57_002311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828521.1"
                     /translation="MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENT
                     VVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGCH
                     PEGEFSVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGE
                     LLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGT
                     DGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRA
                     PVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTVKGDGVTFIVGNINL
                     NGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITD
                     ASRQTLCNALKLQPDEDGIGATLQPA"
     gene            12896..12972
                     /locus_tag="JNZ57_002312"
     tRNA            12896..12972
                     /locus_tag="JNZ57_002312"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12930..12932,aa:Val,seq:gac)
     gene            12977..13053
                     /locus_tag="JNZ57_002313"
     tRNA            12977..13053
                     /locus_tag="JNZ57_002313"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13011..13013,aa:Val,seq:gac)
     gene            13161..13466
                     /locus_tag="JNZ57_002314"
     CDS             13161..13466
                     /locus_tag="JNZ57_002314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monooxygenase"
                     /protein_id="HAY8828522.1"
                     /translation="MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTES
                     EKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA"
     gene            13592..14927
                     /locus_tag="JNZ57_002315"
                     /pseudo
     CDS             13592..14927
                     /locus_tag="JNZ57_002315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416183.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-NAD(P)-binding protein"
BASE COUNT         3681 a         3827 c         3557 g         3862 t
ORIGIN      
        1 aaagaggaat tactcgcccc agaggttttc cacgcgctga ctaccgcact gcgtcgcgaa
       61 ccacggctgc gctttacgct aacagaagtg aatgatctac cggtccggca aacgccgatg
      121 tttacgctgc tgcgtgaggc gggattttca agttcgccac aagggctgga ttggggatag
      181 agaaaggact gacggatgcc cgttcgcatc cgtcagtatt gcaggacgga ttattccgcg
      241 tccggctctt cagacttgta tttagcggca gtttctttga tcagctgctg cagttcgcca
      301 cgctgataca tttcgatcac gatatcacaa ccgccgacca gctcgccgtc aacccacagt
      361 tgcgggaagg tcggccagtt agcatatttc ggcagttccg cacgaatgtc cggattctgc
      421 agaatatcaa cataggcaaa acgttcgcca catgcggcaa gcgcctggac tgcctgggca
      481 gagaaaccgc agctcggcag tttcggtgaa cctttcatgt acagcaggat cgggttttca
      541 gcaatctggc gttggatttt ttcgatagtg gtgctcattg tcttgcttcc tcaaacttct
      601 ttacggcagt aatctgacat tgtagcgggt cagtgcggca tcggaaaata acattttcat
      661 cacgcttttg ctattttatc cctttgctct atttgttgca tttcaaatat tcgtttcttc
      721 tctgatgccg gcaaactggc gtatttataa ccatttttag ctttcactgc tgcatttttt
      781 tgcgctcgcc aacgaaacgt attttttaac aataaaagct attaactttc tcttcttcta
      841 tgcattagaa tcatcaagtt ttgtaaatca gacgcaggca tgatagacct gccttaacag
      901 agggacgctc agtggcgcgg ataaaccgta tttcgatcac gctctgtgct ttacttttta
      961 ccaccctgcc tttaacgcct atggcccatg cttcaaagca agccagggag agttctgcta
     1021 ccactcatat caccaaaaaa gcagataaaa agaaaagcac ggcaaccacc aaaaagaccc
     1081 agaaaacagc gaaaaaagcc gccagtaaaa gtacgaccaa aagcaaaacc gcttcttccg
     1141 ttaaaaaatc ttccattacc gcttctaaaa acgccaaaac tcgcagcaaa cacgccgtca
     1201 ataaaacggc ctcagccagc tttaccgaaa agtgtaccaa acgtaagggc tataaatcgc
     1261 attgtgtgaa agtcaaaaat gccgcgtcag gaactcttgc cgacgcgcac aaagcgaagg
     1321 tgcaaaaagc tacgaaagtg gcaatgaata aactgatgca gcaaattggt aagccatatc
     1381 gttggggtgg cagctcaccg cgtaccggtt ttgattgcag cggcctggtt tattacgctt
     1441 ataaagattt ggtgaaaatt cgtattccgc gtacggcgaa tgaaatgtat cacctgcgtg
     1501 atgcagcgcc aatcgaacgt agtgaactga aaaacggcga cctggtcttt ttccgtactc
     1561 agggacgcgg cacagccgat catgtcggcg tgtatgtcgg caacggcaaa tttattcagt
     1621 caccgcgcac aggtcaggaa attcaaatca cttctctcag tgaagactac tggcagcgcc
     1681 actatgttgg cgctcgtcgg gtaatgaccc caaaaacact tcgctaaaac tttaccctgt
     1741 tgttacggca acagggtaag ttcatctttt gtctcacctt ttaatttgct accctatcca
     1801 tacgcacaat aaggctattg tacgtatgca aattaataat aaaggagagt agcaatgtca
     1861 ttcgaattac ctgcactacc atatgctaaa gatgctctgg caccgcacat ttctgcggaa
     1921 actatcgagt atcactacgg caagcatcat cagacttatg tcactaacct gaacaacctg
     1981 attaaaggta ccgcgtttga aggtaaatca ctggaagaga ttattcgcag ctctgaaggt
     2041 ggcgtattca acaacgcagc tcaggtctgg aaccatactt tctactggaa ctgcctggca
     2101 ccgaacgccg gtggcgaacc gactggaaaa gtcgctgaag ctatcgccgc atcttttggc
     2161 agctttgccg atttcaaagc gcagtttact gatgcagcga tcaaaaactt tggttctggc
     2221 tggacctggc tggtgaaaaa cagcgatggc aaactggcta tcgtttcaac ctctaacgcg
     2281 ggtactccgc tgaccaccga tgcgactccg ctgctgaccg ttgatgtctg ggaacacgct
     2341 tattacatcg actatcgcaa tgcacgtcct ggctatctgg agcacttctg ggcgctggtg
     2401 aactgggaat tcgtagcgaa aaatctcgct gcataataac tgatggcaaa tgcagcattg
     2461 cctgatgcgc ttcgtttacc atgccaacgc ggatgaggcg ttaacagcgc attcggcaag
     2521 ataaatcgca cgttgtcagc aactgtaacg cagaaggtta tccttctgcg tttttgttta
     2581 attagctgtt agcaacgcaa actgtttcag gttgttttct ggctgacata aacaccagca
     2641 ataatgccag tcccgcgaca atcgctccca tcaccggcac aaagctgtat cccagcccag
     2701 cggaaattac cgcaccacca gcagctgctc ccagcgcatt tccaagatta aaggcaccaa
     2761 tattgactga tgaagacaga cctggcgctt cactggcgac acgcatcacg cgcatctgta
     2821 acggcggtac gaccgcaaag gttgctgcgc cccacaccac catgctaata gctgcgccga
     2881 actcattgcg ggccaggaac gggattgcca gcataatcac catcaacaac aacaaaaagc
     2941 ctttcaacgt gccgttaact gaacgatctg ccagtttgcc gccgggatag ttaccgatag
     3001 agaatccgac accaatcagc accagcattg ccgtgacgaa caccggtgtt gcgtgggtaa
     3061 tactttgcag taccggatag atataggtgt agagagtaaa cattgcacca gctcccagta
     3121 ccgtcgtcag caatgcagac agcacctgcg gacgcattaa taccgccagc tcttttttca
     3181 cttcaggtcg tgcccctgca ccacctttag gtaatgagaa gaacagactt accattgaaa
     3241 tcactcccag ccccgccgtt gccagaaatg acatccgcca gccgatggtt tcacccaacc
     3301 aggtcgccgc cggcacgcca ccgatatttg ccagggttaa ccccataaac atagtggcaa
     3361 ctgcgctggc ctgtttatgt tttggctcca cgcttgcggc cacgactgaa cccaaaccaa
     3421 aaaatgctcc gtgattcagg ctggtcaaaa tgcgtgaaag catcagggtc atataatccg
     3481 gcgcgatggc ggaaagtacg ttgccgagcg tgaaaattgc catcaggaaa atcaacgcac
     3541 tgcggcgggc acgatgagaa agtagaagcg tcatcagcgg cgcgccaacc attacgccaa
     3601 ctgcataggc actgattaac attccggcag cgggaatcga gacatccaca ccgcgcgcaa
     3661 tgacgggcaa caagcccatt ggcgagaact ccgttgtccc gataccaaac gcgccaatcg
     3721 ccagcgccag caacggatag ttaattttca tgccttattt ccacctcttc gcgtcattac
     3781 gcgatattca ttaaagtggc gaaagcatga cagcaatcac aaaaaaatga aaataacaaa
     3841 aagagaaaac acttttgcca ttttgctaac aaacaggaag gagatgcgag ggagaacgcg
     3901 ctccctcgag aggaaatcag tgcagcgcgg cagtcaaacc cacggccacg atcaaaccga
     3961 ggacgataat cgttgttacc agtgaaaatt taaggtcggt gctcatcaag ttttctcctt
     4021 ttttattacc acacaaatag tgatattacg catttttaca cactgtgatg aaaaaatctc
     4081 ccgtcattta taatgataag tgtttttacc acttcccctt ttcgtcaaga tcggccaaaa
     4141 ttccacgctt acactatttg cgtactggcc attgacccct tcctgacgct ccgtgtcgtt
     4201 tttccggcgt accgcaacac ttttgttgtg cgtaaggtgt gtaaaggcaa acgtttacct
     4261 tgcgattttg caggagctga agttagggtc tggagtgaaa tggaatggca acaataaaag
     4321 atgtagcgaa acgagcaaac gtttccacta caactgtgtc acacgtaatc aacaaaacac
     4381 gtttcgtcgc tgaagaaacg cgcaacgccg tgtgggcagc gattaaagaa ttacactact
     4441 cccctagcgc ggtggcgcgt agcctgaagg ttaaccacac caagtctatc ggtttgctgg
     4501 cgaccagcag cgaagcggcc tattttgccg agatcattga agcggttgaa aaaaattgct
     4561 tccagaaagg ttacaccctg attctgggta atgcgtggaa caatcttgag aaacagcggg
     4621 cttatctgtc gatgatggcg caaaaacgcg tcgatggtct gctggtgatg tgttctgagt
     4681 acccagagcc gttgctggcg atgctggaag agtatcgcca tatcccaatg gtggtgatgg
     4741 actggggtga agcaaaagct gacttcaccg atgcggtcat tgataacgcg ttcgaaggcg
     4801 gctacatggc cgggcgttat ctgattgaac gcggtcaccg cgaaatcggc gtcatccccg
     4861 gcccgctgga acgtaacacc ggcgcaggcc gccttgccgg ttttatgaag gcgatggaag
     4921 aagcgatgat caaggtgccg gaaagctgga ttgttcaggg tgactttgaa cccgaatctg
     4981 gttatcgcgc catgcagcaa atactgtcgc agccgcatcg ccctactgcc gtcttctgtg
     5041 gtggcgatat catggcaatg ggcgcacttt gtgctgctga tgaaatgggt ctgcgcgtcc
     5101 cgcaggatgt ttcgctgatc ggttatgata acgtgcgcaa cgcccgctat tttacgccgg
     5161 cgctgaccac gatccaccag ccaaaagatt cgctgggtga aacagcgttc aacatgctgt
     5221 tggatcgtat cgtcaacaaa cgtgaagaac cgcagtccat tgaagtgcat ccgcgcttga
     5281 ttgaacgccg ctccgtggct gacggcccgt tccgcgacta tcgtcgttaa tcacccgttg
     5341 cgggagtctc ttccggctcc cgcagccact ccttattcag cgtctcacta tcgccgagat
     5401 actcaagcag ccaggttaac gcaggcgaca tatcattttg ctgccatgtc agacaacatg
     5461 ccgaatccgg gaaggggttt tccaattcaa gtgctaccca cttcccctca ttaagccacg
     5521 gtttggcgaa atgtgttggc accatcccta tgcataatcc tgccgagata caggttgccg
     5581 atgattccca gtcaggcacg acaactcttt tttggttatc cagcaaccag gtaatacgtt
     5641 taggtagcgt tcgcgaggtg tcttcgcgca ccaacgacgg ccagttgcgc aacgtatcat
     5701 cgctgaatgg gccatccatc aacgccagcg ggtggtggct ggcaacaacg caactccagc
     5761 ttagcatccc catatcccgg aaggcataac gaccgcctac cggaatcgcg cgtgttgcgc
     5821 caatcgccag ttccacgcgc ccgtcggaaa gcgcatccca gacaccgttg aacacttcct
     5881 gaaagacaag aagttcgaca tcatcaaaat ggcgataaaa atcaacgatc atctgccgtg
     5941 tacgttctgg cctgacaata ttatccactg cgatagctaa ctgaccgcgc cagccgttcg
     6001 ctatctgctg acattgctgg cgggtgatct gcattttttt gacaacagag cgcccttctt
     6061 tgagaaacca cgctccagca gcggtcagct ccacatcacg gtgccgtcgt tcaaagagcg
     6121 gcaccgccag ccactcttcc agctgacgca cggtatagct gaccgcagaa ggaacgcgat
     6181 gcagctcctg tgccgcagcg ctaaaactac cattacgcgc taccgcatca acaacttcga
     6241 gtgaatattc tgaccacata gtctgcctgc aaaatttttg aaatcagtca tcaaatatta
     6301 ccgtttcaca acactaattt cactccctac actttgcggc ggtgtttaat tgagagattt
     6361 agagaatata catgcaacct gggaaaagat ttttagtctg gctggcgggt ttgagcgtac
     6421 tcggttttct ggcaaccgat atgtatctgc ctgctttcgc cgccatacag gccgacctgc
     6481 aaacgcctgc gtctgctgtc agtgccagcc ttagtctgtt ccttgccggt tttgccgcag
     6541 cccagcttct gtgggggcca ctctccgacc gttatggtcg taaaccggtg ttattaatcg
     6601 gcctgacaat ttttgcgtta ggtagtctgg ggatgctgtg ggtagaaaac gccgctacgc
     6661 tgctggtatt gcgttttgta caggctgtgg gtgtctgcgc cgcggcggtt atctggcaag
     6721 cgttagtgac ggattattat ccttcacaga aagttaaccg aatttttgcg accatcatgc
     6781 cgctggtggg tctatctccg gccctggctc ctctgttagg aagctggctg ctggtccatt
     6841 tttcctggca ggcgattttc gccaccctgt ttgccattac cgtggtgctg attctgccta
     6901 ttttctggct caaacccacg acgaaggccg gtaacaatag tcaggatggt ctgaccttta
     6961 ccgacctgct acgttctaaa acctatcgcg gcaacgtgct gatatacgcg gcctgttcag
     7021 ccagtttttt tgcatggctg accggttcac cgttcatcct tagtgaaatg ggctacagcc
     7081 cggcagttat tggtttaagt tatgtcccgc aaactatcgc gtttctgatt ggtggttatg
     7141 gctgtcgcgc cgcgctgcag aaatggcaag gcaagcagtt attaccgtgg ttgctggtgc
     7201 tgtttgctgt cagcgtcatt gcgacctgga ctgcgggctt cattagccat gtgtcgctgg
     7261 tcgaaatcct gatcccattc tgtgtgatgg cgattgccaa tggcgcgatc taccctattg
     7321 ttgtcgccca ggcgctgcgt cccttcccac acgcaactgg tcgcgccgca gcgttgcaga
     7381 acactctaca actgggtctg tgcttcctcg caagtctggt agtttcctgg cttattagta
     7441 tcagcacgcc attgctcacc accaccagcg tgatgttatc aacagtagtg ctggtcgcgc
     7501 tgggttacat gatgcaacgt tgtgaagaag ctggctgcca gaatcatggc aatgccgaag
     7561 tcgctcatag cgaatcacac tgatctatat cgatatactt atacttaggc tgctaacaaa
     7621 attttgttgt atgattgaaa ttagcggcct atactaattt cgagttgtta aagctacgat
     7681 aaatattatg tttttacggg gacaggatcg ttcccgactc actatggatg gtcatttcgg
     7741 caagggttcc tcctttccct ctgttctacg tcggattata gactcgcggt tttttctgcg
     7801 agatttctca caaagcccaa aaagcgtcta cgctgtttta aggttctgat caccgaccag
     7861 tgatggagaa actatgagtt catcgtgtat agaagaagtc agcgtaccgg atgacaactg
     7921 gtaccgtatc gccaacgaat tacttagccg tgccggtata gccattaacg gttctgcccc
     7981 ggcggatatt cgtgtgaaaa accccgattt ttttaaacgc gttctgcaag aaggctcttt
     8041 ggggttaggc gaaagttata tggatggctg gtgggaatgt gaccgactgg atatgttttt
     8101 tagcaaagtc ttacgcgcag gtctcgagaa ccaactcccc catcatttca aagacacgct
     8161 gcgtattgcc ggcgctcgtc tcttcaatct gcagagtaaa aaacgtgcct ggatagtcgg
     8221 caaagagcat tacgatttgg gtaatgactt gttcagccgc atgcttgatc ccttcatgca
     8281 atattcctgc gcttactgga aagatgccga taatctggaa tctgcccagc aggcgaagct
     8341 caaaatgatt tgtgaaaaat tgcagttaaa accagggatg cgcgtactgg atattggctg
     8401 cggctggggc ggactggcac actacatggc atctaattat gacgtaagca tggtgggcgt
     8461 caccatttct gccgaacagc aaaaaatggc tcaggaacgc tgtgaaggcc tggatgtcac
     8521 cattttgctg caagattatc gtgacctgaa cgaccagttt gatcgtattg tttctgtggg
     8581 gatgttcgag cacgtcggac cgaaaaatta cgatacctat tttgcggtgg tggatcgtaa
     8641 tttgaaaccg gaaggcatat tcctgctcca tactatcggt tcgaaaaaaa ccgatctgaa
     8701 tgttgatccc tggattaata aatatatttt tccgaacggt tgcctgccct ctgtacgcca
     8761 gattgctcag tccagcgaac cccactttgt gatggaagac tggcataact tcggtgctga
     8821 ttacgatact acgttgatgg cgtggtatga acgattcctc gccgcatggc cagaaattgc
     8881 ggataactac agtgaacgct ttaaacggat gtttacctat tatctgaatg cctgcgcagg
     8941 tgctttccgc gcccgtgata ttcagctctg gcaggtcgtg ttctcacgcg gtgttgaaaa
     9001 cggccttcga gtcgctcgct aaaggctatt ctatcgcccc ctctccgggg gcgatttcag
     9061 atcaggcttc tgtacctggt tgattcatgg cattttctcg tgccgccagc acacgttcta
     9121 ccgtatctac cactgcctga gtttgtggat caatttcaat gttgacgcgt gcgccgagtt
     9181 ttttcttccc aagagtcgtg cgttccagag tttccggaat taaatggacg caaaaacgcg
     9241 ttggcgtgac ttcgccgacg gtcaggctaa taccgtcgat gccaataaat cctttgtaca
     9301 ggatatattt catcaactga ctatcctgga ctttaaacca gatctggcga ttattttccg
     9361 aggttaatat tttcgccact tcagcggtgg tcataatatg acctgacatt aagtgtccgc
     9421 caatttcatc actgaatttc gccgcacgct caacgtttac ccaatccccc acttttaaat
     9481 cgccaagatt ggtaatgcgt aacgtttctt tcatcaggtc aaaactgaca tggttgccgt
     9541 taatttccgt cacggtcagg cagcaaccgt tatgcgccac ggaagcaccg gtttccaggc
     9601 cgtccagcat gtggtcgggt aactccacca catgcgtacg aaaatttggt ttctcgtcaa
     9661 tcgacaccag ttttgcggtg ccctgtacaa tccccgtaaa catacttaca actcctgaaa
     9721 tcagttaaga cattctgttc agcacaatag caggtggcaa acgcccttac cagtgaaggg
     9781 gtaagaatga ctattttttc actggagaat taataaatcc tcgctacaat agactgaatt
     9841 tcccctgctt cttctttttg ctgcccattc aggcggcttt ttagtctctc atataactac
     9901 aaataaaagg tgttcacgtg cagaagtata tcagtgaagc gcgtctgtta ttagcattag
     9961 caatcccggt gattctcgcg caaatcgccc aaactgcgat gggttttgtc gataccgtga
    10021 tggcgggcgg ctatagtgcc accgacatgg cggcggtcgc tatcggtact tctatctggc
    10081 ttccggcgat cctctttggt cacggactgc tgctggcatt aacgccggtt atcgcgcaat
    10141 taaatggttc cggtcgacgt gagcgcattg cgcatcaggt gcgacaaggt ttctggctgg
    10201 caggttttgt ttccgttctc attatgctgg tgctgtggaa tgcaggttac attatccgct
    10261 ccatggaaaa catcgatccg gctctggcgg acaaagccgt gggttatctg cgtgcgttgt
    10321 tgtggggcgc gccgggctat ctgttcttcc aggttgcccg taaccaatgt gaaggtctgg
    10381 caaaaaccaa gccgggtatg gtaatgggct ttatcggcct gctggtgaac attccggtga
    10441 actatatctt tatttatggt catttcggta tgcctgagct cggtggcgtt ggttgtggcg
    10501 tggctactgc ggcggtgtat tgggtcatgt tccttgccat ggtttcttac attaaacgcg
    10561 cccgctccat gcgcgatatt cgtaacgaaa aaggcaccgc gaaacccgat cctgcggtta
    10621 tgaaacgact gattcaactc ggtttaccga ttgcgctggc actattcttt gaagtgacac
    10681 tgtttgccgt cgtggctctg ttagtgtctc cgctcggtat tgttgatgtc gcaggacacc
    10741 agattgccct gaactttagt tcactgatgt ttgtgcttcc aatgtcgctg gcggcagcgg
    10801 taactatccg cgtaggttat cgtctgggtc agggctcaac gctggatgcg caaaccgctg
    10861 cgcggaccgg gcttatggtg ggtgtctgta tggcaaccct gacggccatt ttcacggttt
    10921 cactccggga gcaaatcgcc ctgttgtaca acgacaatcc cgaggttgta acgctggctg
    10981 cgcatttgat gttgctggcg gcggtatatc agatttctga ctcaatccag gtgattggca
    11041 gtgggatttt gcgtggttat aaagatacgc gttccatttt ctatatcacc tttacagctt
    11101 actgggtgct gggcttgcca agcggctata ttctggcact gaccgatctg gtcgttgaac
    11161 ctatggggcc agcaggcttc tggataggct ttattatcgg cctgacatcg gcagccatta
    11221 tgatgatgtt gcgtatgcgg ttcctgcaac gtctgccgtc agttatcatt ctgcaacgag
    11281 catcccgcta ataaagacaa ggcgcaacct tcacgggttg cgcctgtgtt tttacgcagg
    11341 ctggagcgtt gcgccaatcc cgtcttcgtc tggctgtaat ttcagagcgt tgcacagagt
    11401 ttgccgactg gcatctgtta tctcaacgtg tatatcaccg gtaacttccc ctttcacatt
    11461 gatgaagtca ggtgagattt ctttcgcact ggtttgcagg caaatcgctc cctctccgcg
    11521 caggcgtttc actttcagtt gcacatgcgt tgccgcacca gtgatcagcc acagttttcc
    11581 gccattcaga ttgatgttac caacaataaa agtgacaccg tcacctttta ccgtactgcc
    11641 gtcgagaatc aacacaccgc cctgctgtac agtaatcgtt gattgttgca gatctgcgcc
    11701 atagccaata atcattgaag cgccgtccag taatgcaaca ctcccggtca gttcaaccgg
    11761 tgcgcgatct tcctctacga caaaattttc gtccgcgctg gtgggtgaca acaggatcac
    11821 tgttccacct tgtattaccg cattttccag cgtaccggca tgcacttcag cccgaccacc
    11881 cacattcacg gacaggtttt gcgtcttacc ggaactgtag agctgaaggc catccgtccc
    11941 cagacgataa atggatccat tctcaacaat agtgtcagag tcttcaccac cgagattatt
    12001 catggtgcca ccagcaagca acgtatcact ggctttcccg gccagcataa aaacgccgcc
    12061 ctgattaatc tcacaattgc tggcttcccc acctggatac accaacaatt caccaccttc
    12121 atctaccacg accgctgagg ttgtcccatt aaccaacagg ccgccctctt gatcgagaat
    12181 gattttttcc gcgcgatgtc cttccagtac acgcaggtta ccgccatttt ccagcaacaa
    12241 accgcaggca taaccctgat caacgctgaa ttcaccttcg ggatggcagc cattaaccgt
    12301 agcgagcgta gagagactaa ttgcgcctcc ctcggactga acaatatctg tggcaatggc
    12361 accgtcgctg accgatagcg tgccattgtt accgtactgt gtgcatttgg cgatcccacc
    12421 ggttgccact ttcaaccagc cagcccccgt gaccacggta ttttcggctc ttccgccagc
    12481 ttcaacaatc aactcgcctt cagtaagttg cgtcgcgcca atgacctcgc cggtcttaac
    12541 aatttgcaca ttcccgtcgc tcatcaagtt tttcgcatca gatcccatga tttattcctt
    12601 tgctgcatct gtgtgccttt attgctacct aagtgtaaag gctacggagg atttatccac
    12661 gacagatttg agatggtggc aaacaactct gtttaaactc tgatacacga attattgggt
    12721 tgtatcagat gtaaatgcga tcctgaataa aaatcgccct tgcaaatcaa caaaatatag
    12781 ccaatttgct taaaagctct gcaaacggtc gaaatagcgc agaaaattac gttttgcctc
    12841 ttgccacctt cccactctgc cgctaatatt cgtccccgtt gtcacctaca acgttgcgtt
    12901 catagctcag ttggttagag caccaccttg acatggtggg ggtcgttggt tcgagtccaa
    12961 ttgaacgcac catcctgcgt acgtagctca gttggttaga gcaccacctt gacatggtgg
    13021 gggtcggtgg ttcgagtcca ctcggacgca ccagattttc ttaatctggt cttctccttt
    13081 ttccctctgt ttcttctctg tatccaatac gttaaaagat ttacactgtc ttcgtatgcg
    13141 ttatcagaag gagaatcgct atggcaactt tgttacaact tcattttgct tttaatggcc
    13201 catttggcga cgcaatggct gagcagctta aaccgcttgc tgagtcgatt aatcaggaac
    13261 ctggttttct gtggaaggta tggacagaaa gtgaaaagaa ccacgaagcc ggtgggatct
    13321 atctttttac tgatgaaaaa agcgcccttg cctatctgga aaaacatact gcccgactta
    13381 aaaatctcgg cgttgaggaa gttgtcgcca aagttttcga tgtcaatgag ccactgagtc
    13441 aaatcaatca ggcaaaactc gcctgacaga atttaatcaa gggcggttag cgcccttttc
    13501 atccctgtct gaaatttctc aaattctaaa aatctcaacc aaacttatct gataacacta
    13561 aattcgaaag aatgcgtaca ggtaagtaac aatgaaaaaa attgctattg tgggtgccgg
    13621 gcctacgggg atctacacct tattctcgct tctacagcaa taaactccac tttctatttc
    13681 tatcttcgag caggctgacg aggccggtgt cgggatgcca tacagtgatg aggaaaactc
    13741 aaaaatgatg ctggcaaata ttgccagtat tgaaataccg ccgattaatt gtacgtatct
    13801 cgaatggcta caaaagcaag aagccagcca tctccagcgt tatggcgtta aaaaagaaac
    13861 cttgcacgat cgtcagtttt taccgcgaat tctgctgggc gaatatttcc gcgatcaatt
    13921 tttacgatta gtagaccagg cacgacagca aaaatttgca gtggctgttt atgaatcatg
    13981 ccaggttacc gatctgcaaa ttacaaatgc tggcgtcatg ctcgctacaa atcaggattt
    14041 acccagcgag acgtttgatt tagcggtgat tgccacgggt cacgtctggc ctgatgaaga
    14101 agaagcaacc agaacgtatt ttcccagtcc gtggtcaggc ctgatggaag caaaggtcga
    14161 tgcgtgtaac gtgggtatta tgggaacatc cttgagcgga ctggatgcgg caatggcagt
    14221 ggctattcag catggttcgt tcattgaaga tgataaacaa cacgtcgttt ttaaccgcga
    14281 taacgcaagt gaaaagctaa atattacgtt gatgtcgcgc acgggtattt tacccgaagc
    14341 cgatttctat tgccctattc cctacgagcc cttacacatc gtcaccgatc aggcattaaa
    14401 tgctgagatt caaaaaggtg aagagggcct tttggatcgg gtatttagat tgatagtaga
    14461 ggaaatcaag tttgctgatc cagactggag ccaacgcata gccttagaga gcctgaatgt
    14521 cgattccttt gctcaagcct ggtttgccga gcgcaaacaa cgcgacccat ttgactgggc
    14581 agaaaaaaat ctccaggaag tcgaacgcaa taaacgagaa aaacatactg ttccctggcg
    14641 ttatgtcatt ctgcgcctgc atgaagccgt acaggaaatt gttccacatc tgaatgaaca
    14701 cgaccataaa cggttcagta aaggccttgc ccgggttttt atcgataatt atgcggcaat
    14761 cccttcagag tctattcgtc ggctgctggc cttacgtgaa gcggggatca ttcatattct
    14821 cgccctcggt gaagactacg aaatggaaat taatgagtcg cgcaccgtcc tgaaaacgga
    14881 agacaacagc tactcgtttg acgtttttat tgatgcccgc ggacagc
//
LOCUS       DADMHC010000091        14902 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.091, whole genome shotgun sequence.
ACCESSION   DADMHC010000091 DADMHC010000000
VERSION     DADMHC010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14902)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14902)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14902
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.091"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..422
                     /locus_tag="JNZ57_002316"
     CDS             <1..422
                     /locus_tag="JNZ57_002316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HAY8828523.1"
                     /translation="LINNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRL
                     AEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTL
                     SIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR"
     gene            423..701
                     /locus_tag="JNZ57_002317"
                     /pseudo
     CDS             423..701
                     /locus_tag="JNZ57_002317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708453.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
     gene            complement(778..1125)
                     /gene="rplS"
                     /locus_tag="JNZ57_002318"
     CDS             complement(778..1125)
                     /gene="rplS"
                     /locus_tag="JNZ57_002318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012768745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HAY8828524.1"
                     /translation="MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFE
                     GVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRE
                     RTGKAARIKERLN"
     gene            complement(1167..1934)
                     /gene="trmD"
                     /locus_tag="JNZ57_002319"
     CDS             complement(1167..1934)
                     /gene="trmD"
                     /locus_tag="JNZ57_002319"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HAY8828525.1"
                     /translation="MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHD
                     RHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSEL
                     ATNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVL
                     GHEASATEDSFAEGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWL
                     RRPELLENLALTEEQARLLAEFKTEHAQQQHKHDGMA"
     gene            complement(1965..2513)
                     /gene="rimM"
                     /locus_tag="JNZ57_002320"
     CDS             complement(1965..2513)
                     /gene="rimM"
                     /locus_tag="JNZ57_002320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HAY8828526.1"
                     /translation="MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDY
                     QPWFIQKAGQWQQVQLESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLE
                     EGDYYWKDLMGCQVVTTEGYDLGKVIDMMETGSNDVLVIKANLKDAFGIKERLVPFLD
                     GQVIKKVDLTTRSIEVDWDPGF"
     gene            complement(2532..2780)
                     /gene="rpsP"
                     /locus_tag="JNZ57_002321"
     CDS             complement(2532..2780)
                     /gene="rpsP"
                     /locus_tag="JNZ57_002321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HAY8828527.1"
                     /translation="MVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFNPIAS
                     EKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVNKAA"
     gene            complement(2917..4278)
                     /gene="ffh"
                     /locus_tag="JNZ57_002322"
     CDS             complement(2917..4278)
                     /gene="ffh"
                     /locus_tag="JNZ57_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HAY8828528.1"
                     /translation="MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVA
                     LPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAV
                     VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFF
                     PSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETL
                     FVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVG
                     EKTEALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDF
                     LEQLRQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTMKERAKPE
                     IIKGSRKRRIAAGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGF
                     PGR"
     gene            4370..5236
                     /locus_tag="JNZ57_002323"
     CDS             4370..5236
                     /locus_tag="JNZ57_002323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311501.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HAY8828529.1"
                     /translation="MQRLEQRSPDAILLLFLIAQTVDITMPVFALLALVAYSVSLALI
                     VPGLLQKNGGWRRMAIISAVIALVCHAIALEARILPHGDSGQNLSLLNVGSLVSLMIC
                     TVMTIVASRNRGWLLLPIVYAFALINLALATFMPNEYITHLEATPGMLVHIGLSLFSY
                     ATLIIAALYALQLAWIDYQLKNKKLAFNQEMPPLMSIERKMFHITQIGVVLLTLTLCT
                     GLFYMHNLFSMENIDKAVLSIVAWFVYIVLLWGHYHEGWRGRRVVWFNVAGAVILTLA
                     YFGSRIVQQLIS"
     gene            5257..6543
                     /locus_tag="JNZ57_002324"
     CDS             5257..6543
                     /locus_tag="JNZ57_002324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026171.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HAY8828530.1"
                     /translation="MEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQ
                     GNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLT
                     FVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIK
                     TDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGID
                     INDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAA
                     DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMS
                     PTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGT
                     RVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE"
     gene            complement(6598..7191)
                     /gene="grpE"
                     /locus_tag="JNZ57_002325"
     CDS             complement(6598..7191)
                     /gene="grpE"
                     /locus_tag="JNZ57_002325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HAY8828531.1"
                     /translation="MSSKEQKTPEGQAPEEIIMDQHEEIEAVEPEASAEQVDPRDEKI
                     ANLEAQLAEAQTRERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSL
                     DRALEVADKANPDMSAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMV
                     ESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKAKA"
     gene            7314..8192
                     /gene="nadK"
                     /locus_tag="JNZ57_002326"
     CDS             7314..8192
                     /gene="nadK"
                     /locus_tag="JNZ57_002326"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HAY8828532.1"
                     /translation="MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCTKGYEVIVEQQIA
                     HELQLKNVKTGTLAEIGQLADLAVVVGGDGNMLGAARTLARYDIKVIGINRGNLGFLT
                     DLDPDNAQQQLADVLEGHYISEKRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMI
                     EFEVYIDEIFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSA
                     RPLVINSSSTIRLRFSHRRNDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYS
                     YFNTLSTKLGWSKKLF"
     gene            8278..9939
                     /gene="recN"
                     /locus_tag="JNZ57_002327"
     CDS             8278..9939
                     /gene="recN"
                     /locus_tag="JNZ57_002327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HAY8828533.1"
                     /translation="MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGL
                     CLGGRAEADMVRTGAARADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGR
                     SRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSLLQEMT
                     ARYQLWHQSCRDLAHHQQLGQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLA
                     NSGQLLTTSQNALALMAYGEDANLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQ
                     IAEASDELRHYCDRLDLDPNRLFELEQRISKQISLARKHHVSPEALPQYYQSLLEEQQ
                     QLDDQADSQETLALAVTKHHQQALEIARALHQQRQQYAEELAQLITDSMHALSMPHGQ
                     FTIDVKFDEHHLGADGADRIEFRVTTNPGQPMQPIAKVASGGELSRIALATQVITARK
                     METPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHYFVSKE
                     TDGAMTETHIQSLNKKARLQELARLLGGSEVTRNTLANAKELLAA"
     gene            10088..10429
                     /gene="bamE"
                     /locus_tag="JNZ57_002328"
     CDS             10088..10429
                     /gene="bamE"
                     /locus_tag="JNZ57_002328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417107.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HAY8828534.1"
                     /translation="MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTANDVS
                     KIRVGMTQQQVAYALGTPLMSDPFGTNTWFYVFRQQPGHKGVTQQTLTLTFNSSGVLT
                     NIDNKPALSSN"
     gene            complement(10491..10781)
                     /locus_tag="JNZ57_002329"
     CDS             complement(10491..10781)
                     /locus_tag="JNZ57_002329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417108.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HAY8828535.1"
                     /translation="MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRT
                     DIDLTKNKVGIYSRPAKLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK"
     gene            complement(10771..11247)
                     /gene="ratA"
                     /locus_tag="JNZ57_002330"
     CDS             complement(10771..11247)
                     /gene="ratA"
                     /locus_tag="JNZ57_002330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system toxin RatA"
                     /protein_id="HAY8828536.1"
                     /translation="MILFVGFLLMEIVMPQISRTALVPYSAEQMYQLVNDVQSYPQFL
                     PGCTGSRILESTPGQMTAAVDVSKAGISKTFTTRNQLTSNQSILMNLVDGPFKKLIGG
                     WKFTPLSQEACRIEFHLDFEFTNKLIELAFGRVFKELASNMVQAFTVRAKEVYSAR"
     gene            11379..11861
                     /gene="smpB"
                     /locus_tag="JNZ57_002331"
     CDS             11379..11861
                     /gene="smpB"
                     /locus_tag="JNZ57_002331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HAY8828537.1"
                     /translation="MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSL
                     RAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYG
                     RVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR
                     "
     gene            12076..12438
                     /gene="ssrA"
                     /locus_tag="JNZ57_002332"
     tmRNA           12076..12438
                     /gene="ssrA"
                     /locus_tag="JNZ57_002332"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(12599..14902)
                     /locus_tag="JNZ57_002333"
                     /pseudo
     CDS             complement(12599..14902)
                     /locus_tag="JNZ57_002333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311542.2"
                     /note="frameshifted; internal stop; incomplete; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
BASE COUNT         3654 a         4003 c         3491 g         3754 t
ORIGIN      
        1 cgttgataaa caattccgat gcccgaaaaa cgtcggcgtt actatttctt gatggcgata
       61 atttcaaata tatcaatgat acctggggtc atgcgacggg cgatagggtc ttgattgaaa
      121 tcgcaaaacg gttagctgaa tttggcgggc tgcgacataa agcataccgc ctgggcggcg
      181 atgaattcgc tatggtgctc tatgatgtac agtcggaatc tgaagtgcaa cagatatgct
      241 cagcactgac acaaatcttt aatctcccgt ttgatcttca taatggccat cagaccacca
      301 tgacattaag cattggttac gcgatgacca ttgagcacgc ctctgcggaa aaattacaag
      361 agcttgccga tcacaatatg tatcaggcca aacaccagcg tgccgaaaag ctggtgagat
      421 agcaacagat ccaaaccatg gcagccaaat tggcctcgac agggctaaca catgcccgta
      481 tggatggaca caccgataac tatggtgaag acagttacaa cgaaggctta tcattgaaac
      541 gggcgaatgt cgtggccgat gcatgggcta ttggtggaca aattccacgc agcaatctca
      601 ccacacaggg tttaggaaaa aaatatccca tagccagtaa caagaccgcc cagggccgcg
      661 ccgagaaccg ccgcgtcgca gtggtgatta caacccctta aaacacgagc aaacagacaa
      721 aaaaagggcc agccaattgg ccagcccttc ttaacaggat gtcgcttaag cgaaatctta
      781 gttaagacgc tctttgatac gagcagcctt accagtacgc tcacgcaggt agtacagttt
      841 agctttacga acagcaccac gacgtttgac agaaatgctg tcaactaccg gagagtgagt
      901 ctggaagaca cgctcaacgc cttcgccgtt ggaaatttta cgaacagtga atgcagagtg
      961 cagaccgcgg ttacgaatag cgataaccac gccctcgaat gcctgcagac gttttttgga
     1021 accttcaaca acccatactt tcacttccac ggtatcaccc ggacggaagg aaggtacgtc
     1081 ctgcttcatc tgctcttgtt caagttgctt aataatgttg ctcataattt aatctcttat
     1141 cctgggtaaa ctgatatctc gggggcttac gccatcccat catgtttatg ttgctgttgt
     1201 gcgtgttccg ttttgaactc cgccagcaac cttgcttgct cttcagtcag agccaggttt
     1261 tccagaagtt caggtcttct aagccaggta cggcccagcg actgtttcaa acgccagcga
     1321 cgtatctcgg catggttgcc cgacagtaac actggcggaa cttccatccc ttctaacacc
     1381 tcaggccgcg tatagtgcgg gcaatccagc aatccttcag caaaggaatc ttccgttgcc
     1441 gaggcttcat gtcccagtac ccccggaata aaccgggaaa cggagtcaat cagcgtcatt
     1501 gctggtaact caccaccact gagaacgtaa tcgccgattg accattcttc gtcaatttcg
     1561 gtttggatca cgcgctcatc tataccttcg tagcgaccgc acaccagaat caatttttga
     1621 ttcgttgcca attcgctgac gcccgcttga tcaagcttgc gtccctgtgg tgacagataa
     1681 atcacctttg cgccttcacc cgccgcggct tttgctgcat gaatggcgtc ccgcaagggt
     1741 tgcaccatca ttaacatccc cggtccgccg ccgtaaggac gatcgtccac ggtacggtgc
     1801 cggtcatgcg tgaagtcgcg aggactccag ctctggatgc tcagcaggcc atttttaact
     1861 gcccggccag ttaccccgta atcggtaatt gcgcggaaca tttcaggaaa caggctaatt
     1921 atgccaatcc acatagcgcc gtcttttacc gtttatccgg tggtttaaaa accaggatcc
     1981 caatctactt cgattgaacg agtagtgaga tcgactttct tgataacctg cccatcgagg
     2041 aacggtacga gacgttcctt gataccaaac gcatctttca ggtttgcctt aatgacgaga
     2101 acgtcattag atccggtttc catcatatcg atgactttac cgagatcgta gccttcagtg
     2161 gttactacct ggcagcccat caggtctttc cagtagtagt caccctcttc aagctgaggc
     2221 aactgcgatg aatccacgac aatttcacaa ttcgtcagca ggttcgccgc atcacgatcg
     2281 tcaacgcctt tcagcttgat gatcatgtcc tgattgtggt gcttccagct ttccagctgg
     2341 acttgctgcc actgacccgc cttctggata aaccagggct gatagtcaaa aatgctttcg
     2401 gcgtcttcgg tggaagaaaa cactctgagc cacccacgaa taccgtaaga cgaacccatt
     2461 tttcccaaaa cgatgggatc aacaggtgct tgcgcggtga gttgtttgct catcatgacc
     2521 accgtgacag attaagctgc tttgtttact tctttgatca gcgcagcaac gcgatcagaa
     2581 atagttgcgc cctggccaac ccagtgagcg atgcgatcca gatctaggcg agtgccttct
     2641 tctttttcgc tagcgattgg gttgaagaaa ccaacgcgct cgatgaagcg accgttgcgt
     2701 gcattacggc tgtcagcgac aacaacctgg tagaacggac gctttttagc gccgtgacgt
     2761 gctaaacgaa tagttaccat aacatcctct tgtgtgaata aaacaacctg accccatcga
     2821 ggaacggagt ccggcgtcat attaaaagcc cgaaaatttt actgatttct ggagaaaatg
     2881 caatcagcag ttaataactc tgtcgcataa ggtcatttag cgaccaggaa atcccggcgg
     2941 catcatcccc ttcatgcttc tcatcatctt cgccattccg cccttcttca ttttcttcat
     3001 catgcgctgc atgtcgtcga actgtttcag aagacggtta acgtcctgca cctgcatacc
     3061 gcaaccggca gcaatacggc gtttacgcga acctttgatg atttctggct tagcgcgctc
     3121 tttcatcgtc atcgagttga tgatggcttc catacgcacc agcactttat cgtccatctg
     3181 tgacttgacg ttatccggga tctgccccat gcccggcagc ttgcccatca ggctggccat
     3241 gccgcccata tttttcatct ggcgcagctg ctcaagaaag tcgttgagat cgaagccgtc
     3301 accttttttc agcttgctgg ctaatttctc tgcctgcgcg cggtcaactt tgctttcgat
     3361 atcttcgatc agcgacagta cgtcgcccat gccgagaata cgcgacgcaa tgcggtccgg
     3421 atggaacggc tccagcgcct cagttttctc gccaacaccg aggaacttga tcggtttgcc
     3481 agtgatgtga cgaatagaga gcgccgcacc gccgcgggca tcgccgtcca ctttggtcaa
     3541 cactacgccg gtaagcggta acgcttcatt gaatgctttt gccgtattgg ccgcatcctg
     3601 accggtcatg gcgtcaacca caaacagggt ttcaaccggg ttaatcgacg catggacttg
     3661 tttgatctcg tccatcatcg cttcgtcaac gtgcagacga ccagcggtat ccaccagcag
     3721 cacgtcgtag aatttcagtt tggcttcttt cagcgccgcg ttaacgatat ctaccggctt
     3781 ctgaccaaca tcagaaggga agaaatcaac gcccacctgc tctgccagcg tctcaagctg
     3841 tttgattgcc gccgggcgat aaacgtcggc agaaaccacc agcactttct tcttgtgctt
     3901 ctcgcgcagg aacttaccga gtttaccaac gctggttgtt ttaccggcac cttgcaggcc
     3961 cgccatcagc acgaccgcag gcggttgcgc cgccaggttc agggtctggt tctcttcgcc
     4021 catcgccgca accagttcgt tacggacgat tttgacgaac tcctgccccg gcgtcaggct
     4081 cttattaact tcatgaccaa ccgctttctc ttttacgcga ttgataaact cacgcactac
     4141 cggcagagcg acatccgcct ccagcagcgc catgcgcact tcgcgcagcg tatcttttac
     4201 gttgtcttca gttaggcgtc cacggccact gatattgcgc agcgtgcgcg acaaacgatc
     4261 ggttaaatta tcaaacattg tctctcgcct ggggtggaaa cggttggccg caatcgcgac
     4321 acatcatcag tattttgccg cagtataaca tgaaggcgtc tttgttgtta tgcaacggtt
     4381 ggagcagcgt tcacctgacg ctatactgct tctctttctt attgctcaaa ctgtcgacat
     4441 cactatgccc gtttttgctc tgctcgcgct tgtcgcctac tccgtcagtc ttgcgctgat
     4501 tgttcccggt ctgctgcaaa aaaacggcgg ctggcggcgc atggctatta tttctgcggt
     4561 cattgcgctg gtctgccacg caatcgctct ggaagcccgc atcctacccc acggtgatag
     4621 cggacaaaac ctcagcctgc tgaacgttgg ttcattggtc agtttgatga tctgtacggt
     4681 aatgaccatt gtggcttctc gcaatcgtgg ctggttgctg ctacccattg tctatgcctt
     4741 tgcgcttatc aacctagcgc tggcgacctt catgcccaat gaatacatca cccatctgga
     4801 agcaacgcct gggatgctgg tgcacattgg cttatcgctc ttttcctatg ccacgctaat
     4861 tatcgccgcc ctgtacgcgc tgcaactggc gtggattgat taccaactga agaacaagaa
     4921 gctggcattt aaccaggaaa tgccgccatt gatgagtatc gagcgtaaaa tgttccacat
     4981 cacgcagatt ggcgtggtgc tgctaacgct cacgctttgc actggcctgt tctacatgca
     5041 caacctattt agcatggaaa atatcgacaa ggctgtgctc tctatcgtgg cgtggtttgt
     5101 ctatattgtg ctgctgtggg gacattacca tgaaggatgg cgtggacgcc gcgtcgtctg
     5161 gtttaacgtt gcgggcgcgg taattctgac actggcctac ttcggcagcc gaattgtcca
     5221 gcagttaatc agctaaaccc agaaaaggag tttcccctgg aacacatttc tactactacg
     5281 ttgatcatta ttctgatcat catggtggtc atttcagcct atttttccgg gtccgaaacc
     5341 ggaatgatga ccctcaaccg ctatcgtctg cgacatatgg cgaaacaggg taatcgctcg
     5401 gccaaacgcg tcgaaaaatt gctgcgtaag ccagaccgcc tgataagcct ggtgttaatc
     5461 ggcaataacc tggtcaatat tcttgcctcc gcgctcggca ctattgttgg gatgcgtttg
     5521 tacggcgatg cgggcgtggc aattgctact ggtgtgctga cttttgtcgt actggtattt
     5581 gctgaggtat tgccgaaaac cattgccgcg ctgtacccgg aaaaagtcgc ttatccgagt
     5641 agttttctgc tggctccgct gcaaattttg atgatgccgc tggtctggtt gctgaatgct
     5701 atcacccgta tgctgatgcg catgatgggt atcaaaaccg atatcgtggt tagcggctct
     5761 ttgagcaaag aagagttgcg cactatcgtg cacgaatcac gctcacaaat ttcccgtcgc
     5821 aatcaggata tgctgctgtc ggtgctcgat ctggaaaaaa tgaccgttga tgacatcatg
     5881 gtgccgcgca gtgaaattat cggtattgat atcaacgatg actggaaatc gattctgcgc
     5941 caactctccc actcacctca cgggcgcatc gtgctctacc gtgattcgct ggacgacgcc
     6001 atcagtatgc tgcgagtacg tgaagcctgg cggttgatgt cggagaaaaa agagttcacc
     6061 aaagaaacca tgctgcgcgc cgcggacgag atctattttg tgccggaagg tacgccgctc
     6121 agcacgcagt tagtaaagtt tcagcgcaac aaaaagaaag tcggcctggt cgtcaacgag
     6181 tatggagaca ttcaggggct ggtgacggtt gaagatattc tggaagagat tgtcggcgat
     6241 ttcactacgt cgatgtcgcc aacacttgcc gaagaggtca cgccgcaaaa cgacggttcg
     6301 gtgattatcg atggcaccgc caacgtgcgg gaaatcaaca aagcctttaa ctggcatcta
     6361 ccggaagatg atgcccgcac ggttaatggc gtcattcttg aggcactgga agagatccct
     6421 gtcgcaggca cccgcgtgcg tattggcgag tacgatatag atattctcga cgtacaggac
     6481 aatatgatta agcaggtaaa agtttttcct gtgaaaccgc tgcgcgagag tgtggcggag
     6541 taacgaaaac ggccctgcat tcgcatgcag ggccgtgaat tattacgaaa acagaaatta
     6601 cgcttttgct ttcgctacag ttaccatcgc cgcacgaatc gtacgaccat tcagcgtata
     6661 acccttctgc ataatgccca gtacgttacc tggcgcaacg tcatcagatt ccaccattgc
     6721 gatagcctga tgcacattcg ggtccagcgg cacgttagtt tcggcgatca cttcaacacc
     6781 aaacttacgc acaacatcca gcatcgactt cagcgtcagc tcaatgcctt caaccatcgc
     6841 agacatatcc gggttagctt tatcagccac ttccagcgca cgatccaggc tatcaatcac
     6901 cggcagcaat tcgttgatga atttctccag cgcgaatttg tgggcttttt caatatccag
     6961 ttcagtacgt cgacgcaggt tttccatttc ggcttttaca cgcaaaatgc cgtcacgttc
     7021 acgggtctgg gcttcagcca gctgagcttc gagattcgca attttttcat cgcgcggatc
     7081 cacctgctca gcagaagctt ctggctcaac tgcctcaatc tcttcgtgct gatccatgat
     7141 aatttcttcc ggggcttgcc cctcaggcgt tttctgttct ttactactca tgaatttctc
     7201 cgcgtttttt tcgcattcat ctcgctaact tcgcttatta tggggatcag tttcagggtt
     7261 tcaagggaag cactcacatt gtcatcaatc ttcgcaacaa ggacctcgga aaaatgaata
     7321 atcatttcaa gtgtattggc attgtgggac acccacggca ccccactgca ctgacaacac
     7381 atgaaatgct ctaccgctgg ctgtgcacaa aaggttacga ggtcatcgtt gagcaacaaa
     7441 tcgctcacga actgcaactg aagaatgtga aaactggcac gctcgcggag attgggcaac
     7501 tagctgatct cgcggtagtc gttggtggcg acggtaatat gctgggcgcg gcacgcacac
     7561 tcgcccgtta cgatattaaa gttattggaa tcaaccgtgg caacctgggt ttcctgactg
     7621 accttgaccc cgataacgcc cagcaacagt tagccgatgt gctggaaggc cactacatca
     7681 gcgagaaacg ttttttgctg gaagcgcaag tctgtcagca agattgccag aaacgcatca
     7741 gcaccgcgat aaatgaagtg gtgcttcatc caggcaaagt ggcacatatg attgagttcg
     7801 aagtgtatat cgacgagatc tttgcgtttt ctcagcgatc tgatggacta attatttcga
     7861 cgccaacagg ctccaccgcc tattccctct ctgcaggcgg tcctattctg accccctctc
     7921 tggatgcgat taccctggtg cccatgttcc cgcatacgtt gtcagcacga ccactggtca
     7981 taaacagcag cagcacgatc cgtctgcgtt tttcgcatcg ccgtaacgac ctggaaatca
     8041 gttgcgacag ccagatagca ctgccgattc aggaaggtga agatgtcctg attcgtcgct
     8101 gtgattacca tctgaatctg attcatccga aagattacag ttatttcaac acattaagca
     8161 ccaagctcgg ctggtcaaaa aaattattct aattttacgc cagcctcttt actgtatata
     8221 aaaccagttt atactgtaca caataacagt aatggttttt catacaggaa aacgactatg
     8281 ttggcacaac tgaccatcag caactttgct atcgttcgtg agcttgagat tgattttcat
     8341 agcggcatga ccgtaataac tggcgagacc ggcgcgggta aatctattgc aatagatgcc
     8401 ctcggtcttt gtctcggtgg tcgcgctgaa gccgacatgg tgcgtaccgg cgctgctcgc
     8461 gctgacctgt gcgcccgttt ttctctgaaa gatacgccag cggctctgcg ctggctggaa
     8521 gaaaatcagc ttgaagacgg gcatgaatgt ttgcttcgtc gcgtgatcag cagcgatggt
     8581 cgctcccgtg gtttcatcaa cggtacagct gttcctctgt cacaactgcg cgaactgggt
     8641 cagttgctga ttcagatcca tggtcagcac gctcatcaat tactcaccaa acctgagcac
     8701 caaaaattcc tgcttgatgg ctatgccaat gaaacctctc tactgcagga aatgaccgca
     8761 cgttatcagt tgtggcatca aagctgccgt gacctcgcgc atcatcaaca gttaggtcag
     8821 gaacgcgccg cccgtgcgga actgctgcaa taccaattaa aagaacttaa cgaatttaat
     8881 ccgcagcccg gagagtttga acaaatcgac gaagagtaca aacgtctggc gaacagcggt
     8941 caattgctga ccaccagcca gaatgcattg gcattaatgg cctacggtga agacgcaaac
     9001 ctgcaaagtc agctttacac ggctaaacaa ctggtgagcg aattgattgg catggacagc
     9061 aaactgtccg gcgtacttga tatgctggaa gaagctacca tccagattgc tgaagccagc
     9121 gatgaactgc gccactactg cgatcgtctg gatctcgatc ccaaccgact atttgaactt
     9181 gaacagcgca tctcaaaaca gatttcgctg gcacgtaaac atcacgtcag ccctgaggca
     9241 ttgccacagt attaccagtc gctactggaa gaacagcagc aactggacga tcaggccgac
     9301 tcacaagaaa cgcttgcgct ggcggtaacg aaacatcatc agcaggcact ggaaatcgcg
     9361 cgcgcattac accaacaacg ccagcaatat gcagaagaac ttgcacagct gatcaccgac
     9421 agtatgcatg cgctctcaat gccgcatggg cagtttacga tcgatgttaa atttgacgag
     9481 catcacctgg gcgctgacgg tgccgatcgt attgagtttc gggtaaccac caacccaggt
     9541 cagccaatgc agcctattgc caaagtcgca tccggtggtg aattgtcccg catcgcactg
     9601 gcaacccagg tcatcacggc gcgtaaaatg gaaaccccgg cactgatttt tgatgaagtg
     9661 gatgtaggga ttagcggtcc aacagcggca gttgtcggca aactgctgcg tcaactcggc
     9721 gaatcaactc aggtgatgtg tgttacccac ctgccacaag tcgcgggatg tggtcatcaa
     9781 cactattttg tcagcaaaga aaccgatggt gcgatgacag aaacgcatat tcaatccctg
     9841 aataaaaaag cgcggttaca agagctggcg cgcctgcttg gtggcagtga agtcacacgt
     9901 aatacactgg cgaatgcgaa agaactgctt gcagcgtaaa cttttttcct gcttcacggt
     9961 cagagtaaac agcaaaacgc cgtaagaccg gaaagcaaaa ggttttaaag tgatgaaagg
    10021 tctattatca tcggcatatt acagatgagc cacgtactgc tcgggcccga aaaggaatca
    10081 aatcactatg cgctgtaaaa cgctgactgc tgcagcagca gtactattga tgttgaccgc
    10141 aggctgttcc actctggagc gagtggttta ccgtcctgac atcaaccagg ggaactatct
    10201 gaccgctaac gacgtatcca aaatacgtgt tggcatgacg caacaacaag ttgcgtacgc
    10261 attgggtaca ccgctgatgt ccgatccatt tggtacgaat acctggttct atgtcttccg
    10321 ccagcaacca ggtcataaag gtgtaacgca gcaaacgctg acgctgacct ttaacagtag
    10381 cggtgtgttg accaatattg ataacaaacc tgcgctgagt agtaactaat aataaagttg
    10441 ctctcaaaga cgttaaaaaa ggtgctcaat gagcaccttt tttctgtctg ttatttattc
    10501 gctgattttt ctgctcgttg cctgcgaagc tctttcggat cggcaatgag agggcgataa
    10561 atctccaccc gatcgccatc atgcacacta tcgcttagtt ttgccggacg gctgtaaatg
    10621 ccgactttgt ttttagttaa atcgatatcg gtacgcaatt ccagcaagcc actggcgcga
    10681 atagcttctt caaccgtcgc gccctcctgc agcgtcacgc gctgcaggta ctgcttctca
    10741 ggtagcgcat aagccacctc aacggcaatt ttacctggca ctgtaaacct ctttcgcacg
    10801 aaccgtaaaa gcctggacca tattagacgc cagctcttta aacacgcgac caaaggcgag
    10861 ttcaatcaac ttattggtaa actcaaagtc gagatgaaac tcgatacgac acgcctcctg
    10921 gctcagcggc gtaaacttcc atccaccaat caatttcttg aacggcccat ccaccagatt
    10981 cataagaata ctttggttac tggtcaactg gttgcgggta gtaaacgttt tgctgatccc
    11041 agccttagag acatctaccg ccgcagtcat ctgcccagga gtggactcca gaatccgact
    11101 tccggtacaa cccggcaaaa actgaggata agactgaacg tcattcacta actgatacat
    11161 ttgctccgcg ctgtagggta ccagtgcggt ccggctaatc tgaggcataa ctatttccat
    11221 caacaaaaat ccaacaaata atatcattta tcctgctgta aaaaaaacgc tatcccggcg
    11281 ctgggtaaca tcgggttcat gctaagatag agccttgtcc cccgcaggat tgatatgggg
    11341 tgttttcgat ttcagattac cgatgattca cgacgcttat gacgaagaaa aaagcacata
    11401 aacctggttc agcgaccatc gcgcttaaca agcgcgcccg tcacgaatac tttatcgaag
    11461 aagagttcga agcgggactt gccctgcaag gctgggaagt taaatccctg cgcgcaggaa
    11521 aagccaatat cagcgacagc tacgtccttc tgcgtgacgg agaggcattt ctgtttggcg
    11581 ctaacatcac gccaatggcc gtagcctcca cgcatgtggt gtgcgatcct acccgtaccc
    11641 gcaagttact tctcaaccag cgcgaactgg actcattgta cggtcgcgtc aatcgagaag
    11701 gctataccgt agtggcgctc tccctgtact ggaaaaatgc ctggtgcaaa gtgaaaatcg
    11761 gcgtcgccaa aggtaaaaaa cagcacgata aacgttcaga tatcaaagaa cgcgaatggc
    11821 aggtggataa agcacgtatc atgaaaaacg cccaccgtta aacctgcact ccaattattg
    11881 accagttcct caccgcgcct ccctctccgg cggcgcgaat gaacatctta ttggctatca
    11941 catccgacac aaatgttgcc atcccattgc ttaatcgaat aaaaatcagg ctacatgggt
    12001 gctaaatctt taacgataac gccattgagg ctggtcatgg cgctcataaa tctggtatac
    12061 ttgccgttac acattggggc tgattctgga ttcgacggga tttgcgaaac ccaaggtgca
    12121 tgccgagggg cggttggcct cgtaaaaagc cgcaaaaaat agtcgcaaac gacgaaaact
    12181 acgctttagc agcttaataa cctgcttaga gccctctctc cctagcctcc gctcttagga
    12241 cggggatcaa gagaggtcaa acccaaaaga gatcgcgtgg aagccctgcc tggggttgaa
    12301 gcgttaaaac ttaatcaggc tagtttgtta gtggcgtgtc cgtccgcagc tggcaagcga
    12361 atgtaaagac tgactaagca tgtagtaccg aggacgtagg aatttcggac gcgggttcaa
    12421 ctcccgccag ctccaccaat catgattgga cggtataagg acaacaccaa taaaaacagg
    12481 aagttagcag tctcagcagg acaccgacca gacggtgaag agacataaaa ggatacgcaa
    12541 aggagccgcg gctcctggtg acatgaaagc ccacagatgt gggctttttc gttgatggtc
    12601 agaacgacca gttcacacca gctaccccgt tccacgggga ttccacaccg gcaccatggc
    12661 tataccccac cccaagatgc ccgcttaacg tactgctgaa tgaggcttta atacctgcct
    12721 ggtatattcc acgtctgccc gacaaatcat tgacgaaatt accgtcacta ttcactttca
    12781 cccggttatc atcgacaaat tctttgcgca cagccgcctt cagccacggc tcaacttcca
    12841 taccgttccc cagacgcatg ttgtaactca gcgttgcacc cagttcacga tataaactgc
    12901 gggtatcgac tgatttcgat tccatgccat tggataaatg atattcaggg ttatcagcgg
    12961 tgaacccccg ttaacgatgc atacggcgtc aggttccagt taccatcggt aaatcgcatc
    13021 ccggtttcaa tgtgaccgcc cagcccgttg ctgcgataac tgccgttggc ggctccaccg
    13081 ctgccaaccg tggagtcgcg agcttcggta cctgctaata ccaataaatt accgccattt
    13141 tccagcaaca tattggtcgc taaattgccg gaaatggaaa aagtgccgta ctggtgagta
    13201 ccgctgattt aaataccgtt agccgtgctc gtctggagag cggcaccgct gttctggacg
    13261 atatctgtcg ctttgccatt atcgttaact gtcagcgtac cgccttcatt gatctttgtt
    13321 tttattgcct ctccgttagc tgaaactgtt tgtattccgc cgtcgttaat cgttgtctca
    13381 ttcgccaccc cctcgacgat ttgttcgccg ccggtgagcg tcgtgcctgt cgcagtggct
    13441 tttgttttga cgatctcccg tccgcccgta ttgacctgtg ttttgtcaga agaggtgtct
    13501 gactccacgg ttaacacgcc gccatttgcc agcaggatat tgttcgccgc accctgctcg
    13561 atgctgaacg cgacgccatc cgcgcgtgtt cctgtgaccc gcgtcgccct ggtggttgca
    13621 accaaagcgc cctggctact ctgctgtatc tccgttgcgc tgcctttctc ccgcacatcg
    13681 agtgtgccgc cgtcattaag caccgagttt tcagccagac cgccctcatt aactacctgt
    13741 gaacccccat taataatgga accttccgct gtcccgtttg ccataatttg ttgtaggcca
    13801 gagacgatat cggtattgat tgccttacca taattctgaa cggtttgcgt gccaccattg
    13861 atgtgtgttt tctctgttga cccaccatca acaatttgtt caccactttc gatatttgcc
    13921 tcagtggcta atccatatac cgtttgcttg ccacctttga tatttgcttt atcagaagtg
    13981 gcactggcat atattgtttg ggtgccagca ctattgagta cagtgccaac atcttttcca
    14041 taaacatcca ttttgccgtt ggcattaata atcgtatcaa ctgcccggga accagtgacg
    14101 actgttaatg agccagcgtt ttccagcact acatttttag cttctgaatt cctgatgtag
    14161 aaagcatcac cataactgtt ggttcctttg ataagggttc cggaagttgt ggaagcaatt
    14221 aatgcgccgc cggattgttg ctcaacatgc ttagcctcac caccgtcctg aacctccaga
    14281 acgccaccat tattaagtct ggtggtatct gttttagcct ccttctggac aatcagctta
    14341 ccgccagcat caacggtagt atttttcgcc gaggttttag ccactaccgt cagttcgccg
    14401 gtattttcca gcacaacata attagcctcc cctccgggta atagtgaagt gagagagctt
    14461 gttgtatcct tcgatatcag tccctgcgcc cgtgttggca actaaagcac tgcccgtctc
    14521 ctggttaacc ccatgtgcta taccgccggt atagacaatc agcgagcctc cggcgctaat
    14581 attgctgcca gttgccgtac catctttctc aacaacctgc cggctcccgg tggaaatatt
    14641 tgtcgtgtca gctttcccgc cgctcttgat attttgtgtt ccgctgttga tattggtacc
    14701 cgtggcaata ccatgattat taatattctg tgtaccacca ttgattatgg tattggtcgc
    14761 gtttccggta acatccatta ccccgccgtt atctattcgg gtcgcatcag ctttagcatt
    14821 cgttaaaact gacattgttc ctttatcttt aataatcgtc ttatttgccg aaccatatgc
    14881 gtttatgtct aaatgaccac cg
//
LOCUS       DADMHC010000092        14830 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.092, whole genome shotgun sequence.
ACCESSION   DADMHC010000092 DADMHC010000000
VERSION     DADMHC010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14830)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14830)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14830
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.092"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..309)
                     /locus_tag="JNZ57_002334"
     CDS             complement(<1..309)
                     /locus_tag="JNZ57_002334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HAY8828538.1"
                     /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA
                     RAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGA
                     I"
     gene            complement(380..2494)
                     /gene="fusA"
                     /locus_tag="JNZ57_002335"
     CDS             complement(380..2494)
                     /gene="fusA"
                     /locus_tag="JNZ57_002335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020455498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HAY8828539.1"
                     /translation="MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVH
                     DGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKT
                     RLGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEW
                     HQNLIESAAEASEELMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQ
                     AMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLT
                     FFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVT
                     TGDTLCDPDAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTD
                     EESNQTIIAGMGELHLDIIVDRMKREFNVEANVGKPQVAYRETIRQKVTDVEGKHAKQ
                     SGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKAGPL
                     AGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETP
                     EENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTM
                     EFLKYDEAPSNVAQAVIEARGK"
     gene            complement(2591..3061)
                     /gene="rpsG"
                     /locus_tag="JNZ57_002336"
     CDS             complement(2591..3061)
                     /gene="rpsG"
                     /locus_tag="JNZ57_002336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006714698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HAY8828540.1"
                     /translation="MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVY
                     SALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMR
                     WIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRW"
     gene            complement(3158..3532)
                     /gene="rpsL"
                     /locus_tag="JNZ57_002337"
     CDS             complement(3158..3532)
                     /gene="rpsL"
                     /locus_tag="JNZ57_002337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003852912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HAY8828541.1"
                     /translation="MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGAL
                     DCSGVKDRKQARSKYGVKRPKA"
     gene            complement(3658..3945)
                     /gene="tusB"
                     /locus_tag="JNZ57_002338"
     CDS             complement(3658..3945)
                     /gene="tusB"
                     /locus_tag="JNZ57_002338"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusB"
                     /protein_id="HAY8828542.1"
                     /translation="MLHTLHRSPWLTDFAALLRLLSEGDELLLLQDGVTAAVDGNRYL
                     ESLRNAPIKVYALNEDLIARGLTGQISNDIIPIDYTDFVRLTVKHSSQMAW"
     gene            complement(3953..4312)
                     /gene="tusC"
                     /locus_tag="JNZ57_002339"
     CDS             complement(3953..4312)
                     /gene="tusC"
                     /locus_tag="JNZ57_002339"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusC"
                     /protein_id="HAY8828543.1"
                     /translation="MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGV
                     FQLLSGQKPDAVLARDYIATFKLLGLYDIEQCWVCAASLRERGLDPQTPFVVEATPLE
                     ADALRRELANYDVILRF"
     gene            complement(4312..4698)
                     /gene="tusD"
                     /locus_tag="JNZ57_002340"
     CDS             complement(4312..4698)
                     /gene="tusD"
                     /locus_tag="JNZ57_002340"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusD"
                     /protein_id="HAY8828544.1"
                     /translation="MRFAIVVTGPAYGTQQASSAFQFAQALIVEGHELSSVFFYRGGV
                     YNANQLTSPASDEFDLVRGWQQLNAQHGVALNICVAAALRRGIVDETEAGRLGLASSN
                     LQPGFTLSGLGALAEASLTCDRVVQF"
     gene            complement(4698..5420)
                     /locus_tag="JNZ57_002341"
     CDS             complement(4698..5420)
                     /locus_tag="JNZ57_002341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709120.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY8828545.1"
                     /translation="MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIG
                     SHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFT
                     RAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFA
                     SSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNI
                     SKHTVYLYIRQFKSGDFQGQDK"
     gene            complement(5587..6399)
                     /gene="fkpA"
                     /locus_tag="JNZ57_002342"
     CDS             complement(5587..6399)
                     /gene="fkpA"
                     /locus_tag="JNZ57_002342"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003827768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HAY8828546.1"
                     /translation="MKSLFKVTLLATTMAVALHAPITFAAEAAKPATTADSKAAFKND
                     DQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKNKLSDQEIEQTL
                     QAFEARVKSSAQAKMEKDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEA
                     PKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLV
                     IPPELAYGKAGVPGIPPNSTLVFDVELLDVKPAPKADAKPEADAKAADSAKK"
     gene            6620..6838
                     /locus_tag="JNZ57_002343"
     CDS             6620..6838
                     /locus_tag="JNZ57_002343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein SlyX"
                     /protein_id="HAY8828547.1"
                     /translation="MQDLSLEARLAELESRLAFQEITIEELNVTVTAHEMEMAKLRDH
                     LRLLTEKLKASQPSNIASQAEETPPPHY"
     gene            complement(6887..7477)
                     /gene="slyD"
                     /locus_tag="JNZ57_002344"
     CDS             complement(6887..7477)
                     /gene="slyD"
                     /locus_tag="JNZ57_002344"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HAY8828548.1"
                     /translation="MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISG
                     LETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQ
                     GPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHH
                     DHDHDGCCGGHGHDHGHEHGGEGCCGGKGNGGCGCH"
     gene            complement(7572..7772)
                     /locus_tag="JNZ57_002345"
     CDS             complement(7572..7772)
                     /locus_tag="JNZ57_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheV family putative metal-binding protein"
                     /protein_id="HAY8828549.1"
                     /translation="MAIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMRE
                     ADKEARDHVRKDEQVIGIFHPD"
     gene            complement(7782..9587)
                     /gene="kefB"
                     /locus_tag="JNZ57_002346"
     CDS             complement(7782..9587)
                     /gene="kefB"
                     /locus_tag="JNZ57_002346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     protein KefB"
                     /protein_id="HAY8828550.1"
                     /translation="MEGSDFLLAGVLFLFAAVAAVPLASRLGIGAVLGYLLAGIAIGP
                     WGLGFISDVDEILHFSELGVVFLMFIIGLELNPSKLWQLRRSIFGVGAAQVLLSAALL
                     AGLLMLTDFAWQAAVVGGIGLAMSSTAMALQLMREKGMNRSESGQLGFSVLLFQDLAV
                     IPALALVPLLAGSADEHFDWMKIGMKVLAFVGMLIGGRYLLRPVFRFIAASGVREVFT
                     AATLLLVLGSALFMDALGLSMALGTFIAGVLLAESEYRHELETAIDPFKGLLLGLFFI
                     SVGMSLNLGVLYIHLLWVVISVVVLVAVKILVLYLLARLYGVRSSERMQFAGVLSQGG
                     EFAFVLFSTASSQRLFQGDQMALLLVTVTLSMMTTPLLMKLVDKWLSRQFNGPEEEDE
                     KPWVNDDKPQVIVVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGD
                     ATQVDLLRSAGAEAAESIVITCNEPEDTMKLVEICQQHFPHLHILARARGRVEAHELL
                     QAGVTQFSRETFSSALELGRKTLVTLGMHPHQAQRAQLHFRRLDMRMLRELIPMHADT
                     VQISRAREARRELEEIFQREMQQERRQLDGWDEFE"
     gene            complement(9587..10138)
                     /gene="kefG"
                     /locus_tag="JNZ57_002347"
     CDS             complement(9587..10138)
                     /gene="kefG"
                     /locus_tag="JNZ57_002347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709126.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     ancillary protein KefG"
                     /protein_id="HAY8828551.1"
                     /translation="MSQPAKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHY
                     PDFFIDIPREQALLREHEVIVFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAG
                     KYWRNVITTGEPESAYRYDALNRYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSA
                     KELANHARAYGDWLANPLSPGGR"
     gene            10264..12177
                     /locus_tag="JNZ57_002348"
     CDS             10264..12177
                     /locus_tag="JNZ57_002348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY8828552.1"
                     /translation="MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLL
                     ALLKNEISADGGSYTFPGSWQLAWVNQETPALSQAALEYVIDGDREYRQLEAQLHDAN
                     ERNDGHAIATIHGKLDAIDAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNL
                     AQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIH
                     IEQQSMFEYTGNYSSFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQA
                     QSRIKMLERMELIAPAHVDNPFRFSFRAPESLPNPLLKMEKVSAGYGDRIILDSIKLN
                     LVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADE
                     SPIQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPN
                     LLLLDEPTNHLDLDMRQALTEALIEFEGALVVVSHDRHLLRSTTDDLYLVHDRKVEPF
                     DGDLEDYQQWLSDVQKQENQTDEAPKENANSAQARKDQKRREAELRAQTQPLRKEIAR
                     LEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACLQQQASAKSGLEECEMAWLEAQ
                     EQLEQMLLEGQSN"
     gene            12177..13199
                     /locus_tag="JNZ57_002349"
     CDS             12177..13199
                     /locus_tag="JNZ57_002349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HAY8828553.1"
                     /translation="MAQITTTDANEFSSSAEFTPMRGFSNCHLQTMLPRLFRRQVKFT
                     PYWQRLELPDGDFVDLAWSEAPAQARHKPRLVIFHGLEGSLNSPYAHGLVEAAQKRGW
                     LGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLA
                     CLLAKEGNDLPVDAAVIVSAPFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLAAY
                     PGTLPINLAQLKSVRRIREFDDLITARIHGYADAIDYYRQCSAMPMLNRIAKPTLIIH
                     AKDDPFMDHQVIPKPESLPSQVEYQLTEHGGHVGFIGGTLLHPQMWLESRIPDWLTTY
                     LEAKSC"
     gene            13193..13411
                     /locus_tag="JNZ57_002350"
     CDS             13193..13411
                     /locus_tag="JNZ57_002350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheU family protein"
                     /protein_id="HAY8828554.1"
                     /translation="MLIPWQDLSPETLENLIESFVLREGTDYGEHERTLEQKVADVKR
                     QLQCGEAVLVWSELHETVNIMPRSQFRE"
     gene            13465..14334
                     /locus_tag="JNZ57_002351"
     CDS             13465..14334
                     /locus_tag="JNZ57_002351"
                     /EC_number="2.7.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribulokinase"
                     /protein_id="HAY8828555.1"
                     /translation="MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSV
                     HRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFIEYGQSGKGKSRKYLHTYD
                     EAVPWNQVPGTFTPWQPLPEPTDVLFYEGLHGGVVTPQHNVAQHVDLLVGVVPIVNLE
                     WIQKLIRDTSERGHSREAVMDSVVRSMEDYINYITPQFSRTHLNFQRVPTVDTSNPFA
                     AKGIPSLDESFVVIHFRNLEGIDFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIML
                     PLVQRLMEGKKIE"
     gene            complement(14389..14793)
                     /locus_tag="JNZ57_002352"
     CDS             complement(14389..14793)
                     /locus_tag="JNZ57_002352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HAY8828556.1"
                     /translation="MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAA
                     GGCSAIDVVSILQKGRQDVVDCEVKLTSERREEAPRLFTHINLHFIVTGRDLKDAAVA
                     RAVDLSAEKYCSVALMLEKAVNITHSYEVVAA"
BASE COUNT         3653 a         4050 c         3652 g         3475 t
ORIGIN      
        1 gatcgcgccg tccatctgag cagcaccggt gatcatgttt ttaacatagt cggcgtgccc
       61 cgggcagtct acgtgtgcgt agtgacgggt cggggtgtca tattcaacgt gagaagtgtt
      121 gatggtgata ccacgagctt tttcttccgg cgcgttatcg atctggtcga atgcacgagc
      181 agcaccgccg taggttttag ccagtacggt ggtgattgca gcggtcagag tagttttacc
      241 gtggtcaacg tggccgatag taccaacgtt aacgtgcggt tttgtacgtt caaatttttc
      301 tttagacacg gctatattcc ttactatagt gctctcccct tcaggagaga gcacgggact
      361 ttggtattaa cccttaggct tatttaccac gggcttcaat tacggcctga gcaacgttac
      421 tcggcgcttc atcatacttc aggaattcca tagtgtatga tgcacgacct ttggtcagag
      481 aacgcagctg agttgcgtat ccgaacattt cagacagcgg tacttcagcg tggatcttaa
      541 cgccagtaac ttcagattcc tgacctttga gcataccacg acgacggctc aagtcaccga
      601 taacgtcacc ggtgttctct tccggagttt ctacttcaac cttcatgatc ggctcaagca
      661 gaactggttt cgctttctta aagccttctt taaaggcgat agaagcagcc agtttaaacg
      721 ccagttcaga ggagtcaacg tcatggtaag aaccgaagtg cagacgaata cccatgtcta
      781 ctaccgggta gcctgccagc ggacctgctt tcagctgttc ctggatacct ttatcaacgg
      841 ccgggatgta ttcgccaggg attacaccac ctttaatgtc gttgatgaac tcgtagcctt
      901 tcgggtttga acccggctcc agcgggtaca tgtcgataac aacatgacca tactgaccac
      961 gaccaccaga ctgtttcgcg tgtttacctt caacatcggt aactttctgg cggatagttt
     1021 cacggtaagc aacctgcggt ttacctacgt tcgcttcaac gttgaattca cgcttcatac
     1081 ggtcaacgat gatgtcgagg tgcagttcgc ccatacccgc gatgattgtc tggttagatt
     1141 cttcgtcagt ccatacacgg aaagacgggt cttctttagc cagacggccc agagccagac
     1201 ccattttttc ctggtcagct ttggttttcg gttcaactgc gatggagatt accggctcag
     1261 ggaattccat acgttccaga atgatcggcg catccgggtc acacagggtg tcaccagtgg
     1321 ttacgtcttt cagaccgata gcagcagcga tgtcgcccgc gcgaacttct ttgatctctt
     1381 cacgtttgtt agcgtgcatc tgaacgatac gaccgaaacg ctcacgtgca gctttcacgg
     1441 agttcagtac ggtatcacca gagttaacca caccggagta aacacggaag aaggtcaggt
     1501 taccaacaaa cgggtcggta gcgattttga acgccagtgc agagaacggc tcgtcatcac
     1561 ttgcgtgacg ttcagccgga gtgtctttac cgtcgtccag gataccgttg atcgcaggta
     1621 cgtcaaccgg ggatggcagg taatcaatta ccgcatccag catcgcctga acacctttgt
     1681 tcttgaacgc agaaccacag gttaccagga tgatttcgtt gttcagaacg cgctgacgca
     1741 gagcaccttt gatttctgct tcagtcagtt cttcaccacc caggtatttt tccatcagct
     1801 cttcagaagc ttcagctgcg gattcgatca ggttctggtg ccattcgtta gccagttcaa
     1861 ccatgtctgc cgggatatct tcgtattcga aggttacgcc ctggtcagcg tcgttccagt
     1921 taatagcttt cattttcacc aggtcaacaa caccggtgaa atgttcttca gcaccaatcg
     1981 ccagctgcag cggaaccgga ttcgcgccca gacgggtttt gatctggtta acaactttca
     2041 ggaagttcgc acccatgcgg tccattttgt taacgaacgc aatgcgcgga actttatatt
     2101 tgtttgcctg acgccatacg gtttcagact gcggctgaac accaccaact gcgcagtaaa
     2161 ccattaccgc accatcgaga acacgcatgg aacgttctac ttcgattgtg aagtcaacgt
     2221 gccccggggt gtcgatgatg ttgatgcgat gcggctcata ctgcttagcc ataccagacc
     2281 agaatgcagt agtcgcagcg gaagtgatgg taataccacg ttcctgctcc tgctccatcc
     2341 agtccatggt tgcagcgccg tcatgaactt cacctatttt atggtttaca ccggtgtaga
     2401 acagaatacg ttcggtagta gtggttttac cggcgtcgat gtgcgcactg ataccgatgt
     2461 tacggtagcg tgcgatgggt gttgtacgag ccatttgttt cctcgtttat cttttaggcg
     2521 ttcaatttaa gtagcccaaa gcgggctgct tactggaagc gcccgcctgg tgactaaaac
     2581 tccgaaggga ttaccaacgg tagtgtgcga acgccttgtt ggcttcggcc atacggtgaa
     2641 cgtcttcacg tttcttaact gcagtacctt tgttttctgc agcatcagaa agttcgttcg
     2701 ccaggcgcag agccatggat ttatcaccgc gtttacgagc agcttcaacg atccaacgca
     2761 ttgccagagc attacgacga accggacgga cttcaactgg tacctgataa gtagaaccac
     2821 caacgcggcg agacttaact tctacagtcg ggcgcacgtt ttcgagagct acttcgaatg
     2881 cttccagttc agatttacca gagcgctgag ccagggtctc cagcgcgctg tatacgatag
     2941 attcagcagt agatttttta ccatctacca tcaggatatt tacaaattta gccagcagtt
     3001 ctgatccgaa cttcggatcc ggcagaattt tacgctgacc aatgacgcga cgacgtggca
     3061 tggaaatact ccgttgttaa ttcaggattg tccaaaactc tacgagttta gtttgacatt
     3121 taagttaaaa cgtttggcct tacttaacgg agaaccatta agccttagga cgcttcacgc
     3181 catacttgga acgagcctgc ttacggtctt taacgccgga gcagtcaagc gcaccacgta
     3241 cggtgtggta acgaacaccc gggaggtctt taacacgacc gccacggatc aggatcacgg
     3301 agtgctcctg caggttgtga ccttcaccac cgatgtagga agtcacttcg aaaccgttag
     3361 tcagacgaac acggcatact ttacgcagcg cggagttcgg ttttttagga gtggtagtat
     3421 atacacgagt acatacgcca cgtttttgcg ggcatgcttc cagcgcaggc acgttgcttt
     3481 tcgcaacttt gcgagcacgt ggtttgcgta ccagctggtt aactgttgcc attaaatagc
     3541 tcctggtttt agcttttgct tcgtaaacac gtaataaaac gtcctcacac aatatgagga
     3601 cgccgaattt tagggcgatg ccgaaaaggt gtcaagaaat atacaacgat cccgccatca
     3661 ccaggccatc tggctggagt gcttaaccgt aagtctgacg aaatcagtat agtcaatggg
     3721 aatgatgtcg ttcgaaattt gaccagtcaa accgcgggca ataaggtctt cgttcagggc
     3781 atagacctta atgggggcat tacgcagact ttcaaggtag cggttaccgt caactgcggc
     3841 agttacgcca tcttgcaata atagcagttc gtctccttca ctgagcagac gcagcagcgc
     3901 agcaaaatcc gtcagccagg gtgaacgatg taacgtgtgc agcataaacg cctcaaaacc
     3961 tcaaaataac atcgtagttg gcgagttcgc ggcgtaaggc atctgcttcg agcggcgtgg
     4021 cttcgacaac aaagggtgtc tgcggatcta acccgcgttc gcgcagtgaa gccgcacaaa
     4081 cccagcactg ttcaatgtcg tacagaccca acaatttaaa agtggcaatg taatcacgcg
     4141 ccagcactgc atcgggcttt tgtcctgaca gcagctgaaa aacgccatca gcaataaaga
     4201 agacggccag atcgtcagtt aatgcggaag ttgccagtaa agcatctaaa ccttcccgac
     4261 cagcagctgt accatgaggt gcagtagaaa aaacaaacgc aattcgtttc atcagaactg
     4321 taccaccctg tcacaggtca gcgaggcttc cgccagcgcg ccaagtccgc ttaaggtaaa
     4381 tcccggctga aggtttgacg aagccagccc cagccttcct gcttcagttt catcgacgat
     4441 accgcggcgt aacgctgccg ctacgcagat attcagcgcc acaccatgtt gcgcattcaa
     4501 ctgttgccag ccgcgcacaa ggtcaaattc gtcacttgcc ggtgaggtca attggttagc
     4561 gttatagacc cctccccgat agaaaaagac gctgcttaac tcatggcctt ctactatcag
     4621 cgcctgcgca aactgaaaag cactactcgc ctgttgcgta ccgtatgctg gcccggtcac
     4681 cacgatggca aaacgcatta cttatcttgc ccctggaaat caccgctctt gaactggcgg
     4741 atgtagagat agacagtgtg tttggagatg ttcaggcggt cagcaacctg gttgatcgca
     4801 tctttaatat cgaagatccc tttctcgtag agattcagca cgatctgacg atttttggcg
     4861 ttattagaaa cattgcgatc ggcattcact tcttcgatgg tgaactccag cgtttgggta
     4921 accagatctt caacagaaga ggcaaagttg acgcttgaac cgacatccgg ggtttctggc
     4981 ggcacaaaag tgctcataat ctgcgagaag ggaacatcaa gattcatatt gatgcacagc
     5041 agaccaatta cacgctgttc gcggttacga atcgcgatag tcagggactt cattaatacg
     5101 ccgcttttgg cgcgagtaaa gtagcattta gaaacgctgc tatccgctcc cgtcatatcg
     5161 tgcagcatac gtagcgccag gtcagtaatt ggcgaaccaa tcttccggcc tgtatgttca
     5221 ccgttagcaa tgcgaatggc tgaacatttt agatcctgca aagagtgcaa aacgatttca
     5281 cagtgggagc caataagcat cgctaacccg tccaccaccg cttcgtagga tttcagaata
     5341 tcaaaatcgg tctggtcgaa aggacgttga tccagtaaat ccaactcact ggtttcgttg
     5401 gttaaaagcg acctggacat gaaaaaaaac actccttttc aggagcctgt cgttaacttt
     5461 tcagggcagg ctcattaatg atgcgggtaa ctaaattaat acagcggagg ttccgctttc
     5521 cagcactaat tatatccggc ctgtaataaa aaaaccgccg cctggtcagg cggcggttct
     5581 taatgcttat tttttagcag aatctgcggc tttcgcatca gcttccggct ttgcatcagc
     5641 cttcggtgct ggtttcacat ccagcagctc tacgtcaaac accagggtag aattcggtgg
     5701 gatccccgga acacccgctt tgccgtaagc cagttctggt ggaataacca gtttgatctt
     5761 accgcctttc ttgatgttct tcagaccttc tgtccaaccc gggataacac cgtccagacg
     5821 gaaagaaagc ggttcaccac gggtgtaaga gttgtcgaac tctttaccgt cgatcagcgt
     5881 acctttgtag ttcactacaa cagtatcgct gtctttcggt gcttcgcctt taccggcttc
     5941 tactacctga taaaccagac cagttgaaga ggttttcaca cctttctctt tggcaaattt
     6001 ctcgcggtac tctttacctt ttgcttcgtt atcagccgcg tctttttcca tcttcgcctg
     6061 agcagaagac ttcacgcgag cttcgaatgc ttgcagagtc tgttcgatct cttggtcgga
     6121 gagtttgttc ttatcagcaa atgcatcctg aacaccagcg atcagctgat ctttatccag
     6181 tttgatgccc agtttttctt gttctttaag agagttttcc atgtaacgac ccagcgaagc
     6241 acccagtgca taagctgatt tctgatcgtc atttttgaac gctgctttgc tgtcagcagt
     6301 tgtagcaggt tttgcagctt cagcagcaaa agtgattggt gcatgcaggg caacggccat
     6361 tgtggtcgcc agcagcgtta ctttaaacag tgatttcatc catatctcca ggatcggggc
     6421 atctcacccc agggttaact attatcagaa gggtactata aagcgttgtc gaacaaatct
     6481 acatacagac acgccctatt atcatctatt ttcagactct ttttgtttaa attagtttcg
     6541 atgaccgcga aatgagtgct gtctcgggca gcaaagttaa gtagaatccg cggcaaccat
     6601 tcgacaaaag aggtgaatca tgcaggattt atcattggaa gcacgcctgg cagagctgga
     6661 gagccgactg gcttttcagg aaatcaccat tgaagaactg aacgtcacgg tgaccgctca
     6721 tgaaatggag atggcgaaac tgcgcgatca tctgcgtctg ctgaccgaga agttaaaagc
     6781 cagccagccg tcgaacatcg cgtcgcaggc tgaagaaacg ccaccgccac attattgagg
     6841 cgtaaaaaaa gcggggattc cccgcttttt tgtcaccttt tcggtattag tggcaaccac
     6901 aaccgccgtt gcctttaccg ccacagcagc cttcgccacc gtgttcatga ccgtgatcgt
     6961 ggccatgacc gccgcagcaa ccgtcgtggt cgtgatcgtg gtgatgatcg tgcgcgccgt
     7021 gaacgtgacc atgagccagt tcttcttcgg tcgcttcacg aatcgccaca acctcaacgt
     7081 tgaatttcag gttctgaccg gccagcatgt ggttaccatc aaccactacg tgatcgtctt
     7141 caaccgcagt gatttcaacc ggtaccggac cctggtcggt ttcagccagg aaacgcatac
     7201 ctacctgcag ttcatcaacg cccataaata cgtctttagg aacacgttgc accaggtttt
     7261 cgtcgtactg accgtaagcg tcgttcgcgc caacagcgac atcaaatttg tcgccaactt
     7321 catgaccttc cagcgccgtt tccaggccag agatcaggga accgtgacca tgcaggtagt
     7381 ccagcggcgc actcaccgga gactcatcaa ccaacacacc gtcttctgta cgtacctgat
     7441 aggccaggct gaccaccagg tcttttgcta ctttcatgat atctcctgag catgggaaga
     7501 atagtggcgc agattgtagc ggaattctgc agccgtgtac tcactagctt aaaaaaactc
     7561 ggcgcatatc gctagtccgg atgaaaaatc ccgatcactt gctcatcttt gcgaacgtga
     7621 tcgcgggctt ctttgtctgc ttctcgcatc tgatgtccgc acttaacgca ttcaacaata
     7681 tcaatattat tttcgcgcca catcgccatt gaatcctgtg cctgacaggc cgggcatttt
     7741 gcgcccgcaa taaaacgttt tcggattgcc atctttaccc tctactcaaa ttcatcccag
     7801 ccgtccagct ggcgtcgttc ttgttgcatt tcacgctgga aaatctcttc cagttcgcgt
     7861 cgggcttccc tggcgcgaga aatttgtaca gtatcggcat gcattgggat gagctctcgc
     7921 agcatccgca tatccaggcg gcgaaaatgc agttgcgccc gctgcgcctg atgcggatgc
     7981 atcccaagcg tgaccaaagt cttgcgcccc agctctaacg cactggagaa tgtttcacgg
     8041 gaaaactgcg tcacccctgc ctgtaataac tcatgcgctt ccacacgtcc gcgcgctcgc
     8101 gcaagaatat gcaaatgcgg aaagtgctgc tggcatattt ccaccagctt catggtgtct
     8161 tccggctcgt tacaggtaat gacgatagac tcagcggcct ctgcacccgc agaacgtaat
     8221 agatcgacct gcgtggcgtc gccgtaataa actttgtagc catatttacg catcaggtta
     8281 acggcgctga tatcccgctc cagcacggta atgcgcattt tatttgccat cagcaaacga
     8341 ccaatcacct gaccaaaacg cccgaagccc acgacaatga cctggggttt atcatcgttg
     8401 acccacggtt tttcgtcttc ttcttccggt ccgttaaact ggcgggataa ccatttatcc
     8461 accagcttca tcagcaacgg cgtggtcatc atggaaagcg tcaccgtcac cagcaacagc
     8521 gccatctggt cgccctggaa taaacgttgt gaagaagcgg tagaaaagag gacaaaggca
     8581 aactcaccgc cctgactcaa cacgccagca aactgcatcc gctctgagct acgcacgcca
     8641 tacaatcgcg ccagcagata cagcacgaga attttcaccg ccaccagcac aaccacgctt
     8701 atcactaccc acaacagatg gatataaagc accccgaggt tgagcgacat gccgacagag
     8761 ataaagaaca aaccgagcag caagcctttg aagggatcga tagccgtttc cagttcatgg
     8821 cgatattcac tttccgccag cagcacgccc gcaataaatg taccgagcgc catcgacagc
     8881 cccagcgcat ccataaacaa tgcggaaccc aacaccagca gcagcgtcgc ggcggtgaac
     8941 acttcccgca cgccagaagc tgcaataaag cggaataccg gacgcagtaa atagcgccca
     9001 ccaatcagca tgccgacaaa cgccagcacc ttcatgccga tcttcatcca gtcgaaatgt
     9061 tcgtctgccg accccgccaa caacggcact aacgccagtg ctgggatcac tgccagatcc
     9121 tgaaacagca gaaccgaaaa cccgagctgg ccggattcgc tgcgattcat ccctttctca
     9181 cgcatcaatt gcaacgccat tgcagttgaa gacatcgcaa ggccaatgcc accgaccacc
     9241 gccgcctgcc aggcgaaatc cgtcagcatc aataatcccg ccagcaacgc cgcgcttaac
     9301 agcacctgtg ccgcgcctac gccaaaaatc gaacgccgca gttgccaaag tttggaggga
     9361 ttcaactcaa gaccgatgat aaacatcagg aataccacgc cgagttccga aaagtggagg
     9421 atctcatcga cgtcgctaat aaaccccagc ccccacgggc caattgcaat ccctgccagc
     9481 aaatatccca acacagcgcc aatccccagc cgcgatgcca acggcaccgc agccaccgcc
     9541 gcgaagagaa acagcactcc tgcgagtaaa aaatcggaac cttccatcag cggcctcctg
     9601 gagacagcgg atttgccagc cagtcaccgt aggctctggc gtggttcgcc agctcctttg
     9661 cgctttgccg tctcgcccag taaataatga tgggacttaa ccaatgcatc cggcacatgc
     9721 ccgccgccag ttcaaagggg cgcagcacat cgctcatcgg gtagcgattc agcgcgtcat
     9781 aacggtaagc actttccggc tcgccggtgg taatcacgtt acgccagtac tttcccgcca
     9841 gttggtttcc tcccggcccg ctggcaaaac cacgacttaa tacccggtcc agccactctt
     9901 tcagtagcgc cgggcagcta taggtataaa gaggatgctg aaagacaatc acctcgtgct
     9961 cgcgcagtaa tgcctgctca cgggggatat caataaaaaa atcgggatag tgcgcgtaaa
    10021 ggtcgtgcac ggtaacattg ctgagctgcg tggccggttt aagcagtacc cggtttgcca
    10081 ccgagtcctg agattccgga tgggcataca gcagcaaaac tttcgctggc tgagacatca
    10141 tccccctccc ggtatggttt ttgtgtatag tcgctgtttt gggctaccat tgcgcccggt
    10201 gcggcagctc gcccatacat tatcataatg ataagttaac atagtctgaa catacggcgc
    10261 cttatgattg ttttctcctc gttacaaatt cgtcgcggcg tgcgcgtcct gctggataat
    10321 gccaccgcca ccatcaaccc tgggcagaaa gtcggcctgg tgggtaaaaa cggctgtggt
    10381 aaatctaccc tgctggcatt gctgaaaaat gaaatcagcg ccgacggcgg cagctacacc
    10441 tttccgggaa gctggcaact ggcgtgggtg aatcaggaaa cgccggcgtt atcgcaagcg
    10501 gcgctggaat atgtcattga cggcgaccgt gaatatcgtc aactggaagc gcagctgcac
    10561 gacgccaacg aacgtaacga cgggcacgcc attgcgacca ttcatggcaa gctggatgct
    10621 attgacgcat ggagtattcg ctcccgtgcc gccagcctgc tgcacggcct cggtttcagc
    10681 aatgaacaac tggagcgccc ggtaagtgat ttctccggtg gctggcgtat gcgtcttaac
    10741 cttgcccagg cgctgatttg ccgttcagac ttgctgctgc tcgacgaacc gactaaccac
    10801 ctcgatctcg atgccgttat ctggctggaa aaatggttga agagctatca aggcacgctg
    10861 atcctgatct ctcacgaccg cgacttcctc gatccgatcg ttgataaaat tattcatatc
    10921 gaacaacaaa gcatgttcga gtacaccggc aactacagtt cgtttgaagt acagcgcgcc
    10981 acccgtctgg cgcagcaaca agcgatgtat gaaagccagc aggaacgcgt ggcacatctg
    11041 caaagttata tcgaccgttt ccgtgccaaa gccaccaaag cgaagcaagc ccagagccgc
    11101 attaagatgc ttgagcgtat ggagctgatt gcccccgcgc acgtcgacaa cccgttccgc
    11161 tttagcttcc gcgcgccgga aagcctgcca aatccgttac tgaagatgga aaaagtcagc
    11221 gcgggctatg gcgatcgcat tattctcgac tcgattaaac tgaacctggt gcccggctcg
    11281 cgcattggtc tgttaggccg caacggcgcg ggtaaatcga cattaatcaa actgttagcc
    11341 ggtgaacttg cgccagtcag cggtgaaatt ggtctggcga aagggatcaa gctcggctac
    11401 ttcgcccagc atcaacttga atacctgcgc gccgacgaat cacctattca acatctggca
    11461 cgtttagcgc cgcaggagct ggaacaaaaa ctgcgtgact acctcggcgg ctttggtttc
    11521 cagggcgata aagtaaccga agaaacgcgc cgcttctccg gtggggaaaa agcccgcctg
    11581 gtgctggcat taattgtctg gcagcgtccg aatctgctgc tgctcgacga accgactaac
    11641 caccttgacc tcgacatgcg tcaggcactc accgaagcat taatcgagtt tgaaggcgcg
    11701 ctggttgtcg tttcgcacga ccgtcatttg ctgcgttcca ccactgacga tctctacctg
    11761 gttcacgatc gtaaagtcga accgttcgac ggcgatctgg aagattatca acagtggttg
    11821 agcgacgtac aaaagcagga aaaccagacc gacgaagcgc caaaagagaa cgcgaacagc
    11881 gcccaggcac gtaaagatca gaagcgtcgg gaagcggagc tgcgtgcgca aacccagccg
    11941 ctgcgtaaag agattgcccg tctggaaaaa gagatggaga agctgaacgc gcaactggcg
    12001 caggcggaag agaaactcgg cgacagcgaa ctgtatgacc agagccgtaa agcggagttg
    12061 accgcctgcc tgcaacagca agccagcgcc aaatccggcc tggaagagtg cgaaatggcg
    12121 tggctggaag cccaggagca gcttgagcag atgctgctgg aaggccaaag caactgatgg
    12181 cgcagataac gacgaccgat gccaatgaat tcagcagcag tgctgaattc acccctatgc
    12241 gcggctttag caattgtcat ctacaaacta tgctgccgcg tttgtttcgt cgtcaggtga
    12301 aattcacccc gtactggcag cggctggagt tgcccgacgg cgattttgtc gatctcgcgt
    12361 ggagtgaagc ccctgcacag gctcggcata aaccgcgttt agtgatattt cacgggctgg
    12421 aaggcagtct caatagccct tacgcccacg gtctggttga ggcggcgcaa aagcgcggct
    12481 ggctgggcgt ggtgatgcat tttcgcggat gcagcggtga accaaaccgt atgcaccgca
    12541 tttaccattc gggcgaaacc gaagacgcca gttggttttt acgctggctg caacgcgaat
    12601 ttggtcatgc gccaacggct gccgtcggct attcgctcgg cggtaatatg ctggcctgtt
    12661 tgctggcaaa ggaaggcaat gatctcccgg ttgatgcggc ggtgattgtc tctgcgccgt
    12721 ttatgctgga agcctgtagc tatcatatgg aaaagggctt ttcccgcgtt tatcagcgtt
    12781 acttgctgaa cctgttaaaa gccaatgccg cgcgcaagct ggcagcctac cccggaacgc
    12841 tgccgattaa tctcgcgcag ttaaaatcgg tacgtcgcat ccgtgaattt gacgatctaa
    12901 tcaccgccag aattcacggc tacgccgacg ctatcgacta ttatcgtcag tgtagcgcca
    12961 tgccgatgct gaaccggatc gccaaaccga cgctgattat tcacgccaaa gacgatccgt
    13021 ttatggatca tcaggtgatc ccgaaaccgg aaagtctccc ctcgcaggtg gagtatcaac
    13081 tgactgaaca tggcggtcat gttggcttta ttggcggtac attacttcat ccgcaaatgt
    13141 ggctggagtc acgcattcct gactggttaa caacgtatct ggaggcgaaa tcatgttgat
    13201 tccgtggcaa gacctctccc ccgaaacgct ggaaaattta attgaaagct ttgtgttacg
    13261 tgaaggcacc gattatggtg aacatgagcg tacacttgaa cagaaagtcg ccgacgtcaa
    13321 acgccagcta cagtgcggag aagcggtgct ggtatggtcg gagctgcacg aaacggtcaa
    13381 tattatgccg cgcagtcagt ttcgcgaata acctgcaacc gtcggcggac gagataataa
    13441 tgatagctaa gtcatggagt tactatgtct gccaaacatc cggtcattgc ggtaacagga
    13501 tccagcggcg cggggaccac caccaccagc ctcgcgtttc gtaaaatatt cgcgcagtta
    13561 aatctgcatg cagctgaggt ggaaggcgac agtgttcacc gttacacccg cccggaaatg
    13621 gacatggcga tccgcaaagc gcgcgacgcc gggcggcata tcagctactt cggccccgaa
    13681 gcgaacgact tcggcctgct ggaacaaacc ttcattgaat acggtcagag cggcaaaggg
    13741 aaatctcgca aatatctgca tacctacgac gaagccgtac cgtggaatca ggtaccggga
    13801 acattcaccc cctggcaacc tttaccagaa cccactgatg tactgtttta tgaaggttta
    13861 cacggcggcg tagtcacgcc acagcataac gttgcgcagc atgtggactt actggtcggc
    13921 gtagtgccta tcgttaacct tgagtggatt caaaaactga tccgcgacac cagcgagcgc
    13981 gggcactcac gagaagcagt gatggactca gtagtgcgtt caatggaaga ctatatcaac
    14041 tacatcacac cgcagttttc ccgcacccat cttaacttcc agcgcgttcc caccgtcgac
    14101 acttcaaacc cgttcgcggc aaaaggtatc ccgtcgctgg atgaaagctt tgtggtgatc
    14161 cattttcgta atctggaagg gatcgatttc ccctggctgc tggcgatgtt gcaaggctca
    14221 ttcatttccc acatcaatac gttagtggta ccgggcggca aaatgggtct ggcaatggaa
    14281 ttaattatgc tgccgctggt gcaacgattg atggaaggaa agaaaatcga gtaactctgc
    14341 tattacgccg gataaaatac tatccggctt cacaacggga tagttaaatc acgcggcaac
    14401 cacttcatac gagtgagtaa tattcaccgc tttttccagc atcaacgcca ctgaacaata
    14461 tttctcggca gagagatcaa ccgcacgcgc aaccgctgcg tctttcaggt cgcgaccggt
    14521 gacgataaaa tgcagattaa tgtgcgtaaa caggcgtggt gcctcttcgc ggcgttcaga
    14581 ggtcaatttt acttcacaat cgaccacatc ctgacgccct ttttgcagga tcgaaaccac
    14641 atcgatggca ctgcaacccc ccgccgccat caacaccatt tccatcggac ttggtgcttt
    14701 atcgcctgag ttgccgtcca ttaaaatctg atgaccagag gcggattcgc ccagaaaagt
    14761 taacccttcg acccacttca ctcgcgcttg catttttgct actccactgc gtcaattttc
    14821 ctgacagagt
//
LOCUS       DADMHC010000093        14793 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.093, whole genome shotgun sequence.
ACCESSION   DADMHC010000093 DADMHC010000000
VERSION     DADMHC010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14793)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14793)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14793
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.093"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..464
                     /locus_tag="JNZ57_002353"
     CDS             <1..464
                     /locus_tag="JNZ57_002353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="serine/threonine-protein phosphatase"
                     /protein_id="HAY8828557.1"
                     /translation="QLLEQHWVCAVRGNHEQMAMDALASQQMSLWLMNGCDWFIALAD
                     NQQKQAKTALEKCQHLPFILEVHSRTGKHVIAHADYPDDVYEWQKDVDLHQVLWSRSR
                     LGERQKGQGITGADHFWFGHTPLRHRVDIGNLHYIDTGAVFGGELTLVQLQ"
     gene            complement(465..740)
                     /locus_tag="JNZ57_002354"
     CDS             complement(465..740)
                     /locus_tag="JNZ57_002354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebW family protein"
                     /protein_id="HAY8828558.1"
                     /translation="MAGYLSWLFPRCKISPKLNGTAPHFGDEMFALVLFVCYLDGGCE
                     DIVVDVYNTEQQCLYSMSDQRIRQGGCFPIEDFIDGFWRPAQEYGDF"
     gene            complement(761..997)
                     /locus_tag="JNZ57_002355"
     CDS             complement(761..997)
                     /locus_tag="JNZ57_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707284.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1480 family protein"
                     /protein_id="HAY8828559.1"
                     /translation="MKTSVRIGAFEIDDGELHGESPGDRTLTILCKSDPDLCMQLDAW
                     DAETSIPALLNGEHSVLYRTRYDQQSDAWIMRLA"
     gene            complement(1115..2554)
                     /gene="rsmF"
                     /locus_tag="JNZ57_002356"
     CDS             complement(1115..2554)
                     /gene="rsmF"
                     /locus_tag="JNZ57_002356"
                     /EC_number="2.1.1.178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416349.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1407)-C(5))-methyltransferase
                     RsmF"
                     /protein_id="HAY8828560.1"
                     /translation="MAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVN
                     TLKISVADFLQLTAPYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEA
                     SSMLPVAALFADGNAPQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHA
                     NISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESN
                     QEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGD
                     LFPGANKALTEEGFLHVFPQIYDCEGFFVARLRKTQAIPALPAPKYKVGNFPFSPVKD
                     REAGQIRQAAADVGLNWDENLRLWQRDKELWLFPVGIEALIGKVRFSRLGIKLAETHN
                     KGYRWQHEAVIALATPDNVNAFELTPQEAEEWYRGRDVYPQAAPVADDVLVTFQHQPI
                     GLAKRIGSRLKNSYPRELVRDGKLFTGNA"
     gene            complement(2634..5267)
                     /gene="yebT"
                     /locus_tag="JNZ57_002357"
     CDS             complement(2634..5267)
                     /gene="yebT"
                     /locus_tag="JNZ57_002357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416348.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-binding membrane homeostasis protein YebT"
                     /protein_id="HAY8828561.1"
                     /translation="MSQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQD
                     RSNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDAL
                     REETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGTGKEQDHFVALDTQPKYRLDNGD
                     LMIHLQAPDLGSLNSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKG
                     SRFWNVSGVDANVSISGAKVKLESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAH
                     SQRGVIIKLELPSGAGLTADSTPLMYQGLEVGQLTKLDLNPGGKVTGEMTVDPSVVTL
                     LRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDV
                     LTLTLTAPESYGIDTGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRELVKGDSK
                     FVVNSRVDVKVGLDGVEFLGASASEWINGGIRILPGDKGEMKASYPLYANLEKALENS
                     LSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVRPRANAFDIDLHIKPEYRNL
                     LTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASQRKGDKRILY
                     ASETAARAVGGQITLHAFDAGKLAVGMPIRYLGIDIGQIQTLDLITARNEVQAKAVLY
                     PEYVQTFARGGTRFSVVTPQISAAGVEHLNTILQPYINVEPGRGNPRRDFELQEATIT
                     DSRYLDGLSIIAEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRVMIAMRISKRY
                     QHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGK
                     HFLLQESEPKEWREWGTALPK"
     gene            complement(5236..6519)
                     /gene="yebS"
                     /locus_tag="JNZ57_002358"
     CDS             complement(5236..6519)
                     /gene="yebS"
                     /locus_tag="JNZ57_002358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity lipid transport subunit YebS"
                     /protein_id="HAY8828562.1"
                     /translation="MALNTPQITPTKKITVRSIGEELPRGDYQRCPQCDMLFSLPEIN
                     SHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANV
                     MQGIWQMTKQGDTITGAMVFFCVIGAPLILVSSIAYLWFGNRLGMNLRPVLLMLERLK
                     EWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERYY
                     PQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVL
                     LLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFT
                     LLLSTHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTIGPAA
                     FYFGAAVILTILAVEWLDSRLLWDAHESGNARFDD"
     gene            6649..7146
                     /locus_tag="JNZ57_002359"
     CDS             6649..7146
                     /locus_tag="JNZ57_002359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HAY8828563.1"
                     /translation="MNKTEFYADLNRDFNALMAGETSFLATLANTSALLYERLTDVNW
                     AGFYLLEDDTLVLGPFQGKIACVRIPVGRGVCGTAVARNQVQRIEDVHAFDGHIACDA
                     ASNSEIVLPLVVKNQIIGVLDIDSTVFGRFTDEDEQGLRQLVAQLEKVLATTDYKKFF
                     ASVAG"
     gene            7243..7941
                     /gene="proQ"
                     /locus_tag="JNZ57_002360"
     CDS             7243..7941
                     /gene="proQ"
                     /locus_tag="JNZ57_002360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707288.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone ProQ"
                     /protein_id="HAY8828564.1"
                     /translation="MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVD
                     RVAGEMNLSKTQLRSALRLYTSSWRYLYGVKPGATRVDLDGNPCGELDEQHVEHARKQ
                     LEEAKARVQAQRAEQQAKKREAAAAAGEKEDAPRRERKPRPTTPRRKEGAERKPRAQK
                     PVEKAPKTVKAPREEQHTPVSDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLN
                     SGMSLIVRAEHLVF"
     gene            7961..10009
                     /gene="prc"
                     /locus_tag="JNZ57_002361"
     CDS             7961..10009
                     /gene="prc"
                     /locus_tag="JNZ57_002361"
                     /EC_number="3.4.21.102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy terminal-processing peptidase"
                     /protein_id="HAY8828565.1"
                     /translation="MNMFFRLTALAGLLAIAGQTFAVEDITRADQIPVLKEETQHATV
                     SERVTSRFTRSHYRQFDLDQAFSAKIFDRYLNLLDYSHNVLLASDVEQFAKKKTELGD
                     ELRSGKLDVFYDLYNLAQKRRFERYQYALSVLEKPMDFTGNDTYNLDRSKAPWPKNEA
                     ELNALWDSKVKFDELSLKLAGKTDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAF
                     AREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSKAI
                     SVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGTKTRTVTLT
                     RERIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDL
                     RSNGGGALTEAVSLSGLFIPAGPIVQVRDNNGKVREDSDTDGQVFYKGPLVVLVDRFS
                     ASASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQYTI
                     QKFYRVNGGSTQRKGVTPDIIMPTGNEETETGEKFEDNALPWDSIDAATYVKSGDLTA
                     FGPELLKEHNARIAKDPEFQNIMKDIARFNAMKDKRNIVSLNYAVREKENNEDDATRL
                     ARLNERFKREGKPELKKLDDLPKDYQEPDPYLDETVNIALDLAKLEKARPAEQPAPVK
                     "
     gene            10201..11082
                     /gene="htpX"
                     /locus_tag="JNZ57_002362"
     CDS             10201..11082
                     /gene="htpX"
                     /locus_tag="JNZ57_002362"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014229823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HAY8828566.1"
                     /translation="MMRIALFLLTNLAVMVVFGLVLSLTGIQSSSVQGLMIMALLFGF
                     GGSFVSLLMSKWMALRSVGGEVIEQPRNERERWLVNTVATQARQAGIAMPQVAIYHAP
                     DINAFATGARRDASLVAVSTGLLQNMSPDEAEAVIAHEISHIANGDMVTMTLIQGVVN
                     TFVIFISRILAQLAAGFMGGNRDEGEESNGNPLIYFAVATVLELVFGILASIITMWFS
                     RHREFHADAGSAKLVGREKMIAALQRLKTSYEPQEATSMMAFCINGKSKSLSELFMTH
                     PPLDKRIEALRTGEYLK"
     gene            complement(11128..12501)
                     /locus_tag="JNZ57_002363"
     CDS             complement(11128..12501)
                     /locus_tag="JNZ57_002363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8828567.1"
                     /translation="MPKVQADGLPLPQRYGAILTIVIGISMAVLDGAIANVALPTIAT
                     DLHATPASSIWVVNAYQIAIVISLLSFSFLGDMFGYRRIYKCGLVVFLLSSLFCALSD
                     SLQMLTLARVIQGFGGAALMSVNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIA
                     AAILSIASWKWLFLINVPLGIIALLLAMRFLPPNGSRASKPRFDLPSAVMNALTFGLL
                     ITALSGFAQGQSLTLIAAELVVMVVVGIFFIRRQLSLPVPLLPVDLLRIPLFSLSICT
                     SVCSFCAQMLAMVSLPFYLQTVLGRSEVETGLLLTPWPLATMVMAPLAGYLIERVHAG
                     LLGALGLFIMAAGLFSLVLLPASPADINIIWPMILCGAGFGLFQSPNNHTIITSAPRE
                     RSGGASGMLGTARLLGQSSGAALVALMLNQFGDNGTHVSLMAAAILAVIAACVSGLRI
                     TQPRSRA"
     gene            12678..13469
                     /gene="kdgR"
                     /locus_tag="JNZ57_002364"
     CDS             12678..13469
                     /gene="kdgR"
                     /locus_tag="JNZ57_002364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012132042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator KdgR"
                     /protein_id="HAY8828568.1"
                     /translation="MANADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMS
                     KSTVYRFLQTMKTLGYVAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMREISR
                     LTKETIHLGALDEDSIVYIHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDRDEV
                     KQILEGVEYKRSTERTITSTEALLPVLDQVREQGYGEDNEEQEEGLRCIAVPVFDRFG
                     VVIAGLSISFPTLRFSEERLQEYVAMLHTAARKISAQMGYHDYPF"
     gene            complement(13612..13851)
                     /locus_tag="JNZ57_002365"
     CDS             complement(13612..13851)
                     /locus_tag="JNZ57_002365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828569.1"
                     /translation="MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLT
                     ARGTSTVQYLHTKNGFLGITDCPLLRKSNIVADNG"
     gene            14010..14153
                     /gene="mgrB"
                     /locus_tag="JNZ57_002366"
     CDS             14010..14153
                     /gene="mgrB"
                     /locus_tag="JNZ57_002366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoP/PhoQ regulator MgrB"
                     /protein_id="HAY8828570.1"
                     /translation="MKKFRWVVLVVVVLACLLLWAQVFNMMCDQDVQFFSGICAINQF
                     IPW"
     gene            14228..14515
                     /locus_tag="JNZ57_002367"
     CDS             14228..14515
                     /locus_tag="JNZ57_002367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828571.1"
                     /translation="MNEVVNSGVMNIASLVVSVVVLLIGLILWFFINRASSRTNEQIE
                     LLEALLDQQKRQNALLRRLCEANEPEKADKKTIESQKSVDDEDIIRLVAER"
BASE COUNT         3878 a         3593 c         3797 g         3525 t
ORIGIN      
        1 tgcagttact ggaacaacat tgggtttgtg cggtaagagg caatcatgaa cagatggcga
       61 tggatgcgct ggcatcccag cagatgtctt tgtggttgat gaatggctgc gactggttta
      121 ttgcgctggc agataatcaa cagaaacaag cgaaaacggc gctggaaaaa tgtcagcatt
      181 tgccctttat tcttgaagta cacagtcgca ccggcaagca tgttattgct catgcggatt
      241 atccagatga tgtttatgaa tggcaaaagg acgttgattt gcatcaggtc ttgtggagcc
      301 gctcgcgatt aggtgaacgc caaaaagggc agggaattac aggtgctgat catttctggt
      361 ttggtcatac accgttgcga catcgcgtgg atattggcaa cctgcattat attgataccg
      421 gtgctgtctt tgggggcgaa ctgactcttg tgcaattgca atgattaaaa atcaccgtac
      481 tcctgtgcag gtcgccagaa accatctata aaatcctcaa tcggaaaaca accgccctgg
      541 cggatccgtt gatcgctcat agaataaaga cactgctgtt ccgtgttgta gacatccaca
      601 acaatatctt cacaaccgcc atccaggtag caaacaaaaa gtaccagcgc gaacatttca
      661 tccccgaagt gtggtgccgt accgttaagt ttaggagaga ttttacaacg ggggaataac
      721 caggacaaat aacccgccat gccgacgggt tctttttgga tcaggcaaga cgcataatcc
      781 aggcatcaga ttgttgatcg taacgggtac ggtaaaggac agagtgttcg ccatttagca
      841 gggcagggat actggtttca gcatcccagg catcgagttg catacataaa tcggggtcag
      901 atttacaaag aatggttaac gttcgatcac ccggcgattc accgtgtaat tcgccgtcgt
      961 cgatttcaaa agcgcctatg cgcacactgg ttttcatctt cgtgctctcc atttagctgc
     1021 cggttgtggt acgaccagtc cgatcgcacc atttttcagc ctagttgagg cagccgaatg
     1081 tgccagtcaa aaagtgcgct ttttttgtgc gctgtcaggc gttaccggta aaaagtttcc
     1141 catcgcgcac cagttcacgc ggatagctgt ttttcaatcg cgaaccaatc cgtttggcta
     1201 aaccaatcgg ttgatgctgg aaagtaacca acacgtcatc cgccactggc gcggcttgcg
     1261 ggtaaacatc gcgcccgcga taccactcct ccgcttcctg cggtgtcagt tcaaaagcgt
     1321 tcacattgtc gggggtggca agggcaataa ctgcttcatg ctgccagcga taacctttgt
     1381 tgtgcgtttc ggcaagttta atccccaagc gagaaaatcg gactttaccg atcagggctt
     1441 caatgcccac cgggaacaac cacagttctt tgtcacgctg ccagaggcgc aggttttcat
     1501 cccagtttaa gccaacatct gcagccgcct ggcgaatttg tccagcttcg cgatctttca
     1561 ccgggctgaa cggaaaatta ccgactttgt atttgggggc gggtaaggcg ggaatcgcct
     1621 gagttttacg cagacgagca acgaagaagc cttcgcagtc gtaaatttgt gggaaaacat
     1681 gcaaaaagcc ttcttcggtc agcgctttgt ttgcaccagg gaagagatcg ccaagtggta
     1741 aaaactctac tgcgtcgggg taagtctctt tcagccacag gcaaacggct tcgttttctt
     1801 cctggtttaa ggtacaggtc gagtaaacca gcgtaccacc aggacgtaat gcatgaaagg
     1861 cgctgtcgat aagctcccgt tgtgtagctg cgatttcctg attgctttct ggtgaccagt
     1921 tttttagcgc atcgggatct ttacgcacca cgccttcgcc ggagcaggga gcgtccagca
     1981 aaatggcatc aaacatttct ggcactgccg caccaaacac gcggccatca aaatgtgtga
     2041 gcgcaacatt actgatgcca cagcggctga tattggcatg taacactttt acccgactgg
     2101 cggaaaactc attggcaagg attgcccctt cgttattcat ccgcgcggca atttgcgtcg
     2161 tttttgagcc tggcgcagca gcgacatcca tcacccgctg tggtgcatta ccgtcagcaa
     2221 acaaggcggc gacgggcaac attgaactgg cttcctgaat ataaaacagg ccacttaaat
     2281 gctcggcggt actacccaat ggcaatgcat cttcattgtc gcgttcaatc cagaaacctt
     2341 cttcacacca cggaattggc gtaagcgtcc agccataagg agcggttaat tgcaggaaat
     2401 cagcaacgga gattttcagc gtattaacgc gaatgctgcg gcgcaacggg cgctgacagg
     2461 cggcaagaaa atcatcaaat gagagcgtcg aaggcatagc ttcgcgcatt tgtgtcagaa
     2521 acgcgtccgg gaaataaacg gtgtgttggg ccacgagcat gtaccactgg caaaaaaaca
     2581 ggcgcgcagt ttagcataaa cgctccggcg caggcacgcc ggagcagtgg gcattatttg
     2641 ggaagcgcag ttccccattc acgccactct ttcggttcac tttcctgcaa caggaagtgt
     2701 ttgccttcct gggctttcgg tgccagtggc gtacccggag gcgtggcgaa ggcgatgccg
     2761 ccacggataa actggttaaa ggtgccggtt ttcactacgc cgcccgtcag accaaagtcc
     2821 agactgtaac ccgatgccaa ccagaagacg gaattgttac gcaccaggtg ttgatagcgt
     2881 ttactgatgc gcatcgcaat catcacgcga tctgacaatg tccccagcgt cattccggta
     2941 accgtaccta cttccagacc acggaacagc acaggcgtac caatacctaa cgaaccggct
     3001 tccggtgctt cggcaataat gcttaagcca tccaggtaac gcgaatcagt aatagtagct
     3061 tcttgcaact caaagtcacg gcgaggatta ccccgacctg gttcgacatt gatatacggc
     3121 tggaggatag tatttagatg ctcaacgcct gcggctgaaa tttgcggtgt gaccaccgag
     3181 aagcgcgtac cgccgcgggc gaaggtctgg acatactccg gatagagcac cgcctttgcc
     3241 tgtacttcat tgcgcgcggt aatcagatcc agcgtctgga tttgcccgat atcaataccg
     3301 agatagcgaa ttggcatccc gaccgccagt tttccggcat cgaaagcgtg aagcgtaatc
     3361 tgcccaccaa ccgcacgggc cgctgtttcg gaagcataca gaattcgttt gtcgccttta
     3421 cgctgactgg cgctggcacc gctgaggtta tcgaagctaa tggctccctt taatgctctg
     3481 gagagcgggg atgcctgtac ggtcaggcca ctaccattca gctgaacttt cgccccgcct
     3541 tctgcccaga acacgctatt gctggtcaga aggttgcgat actccggctt aatatgcaga
     3601 tcgatatcaa acgcgttagc tcgcggacgc acggtaatca cttcaccaac ttcaaattta
     3661 cggtacagca ctaccgatcc tgcctgcaca tccggcagcg tctctgcact caaactcacg
     3721 gttgtggtgg gtaaatcgct aaggctgttc tccagcgctt tttccagatt ggcatacagt
     3781 ggatagctgg ctttcatctc acctttatcg cctggcagaa tacgtatccc gccgttaatc
     3841 cattctgagg cgctggcacc aagaaactca acgccatcca gccccacctt cacgtcgaca
     3901 cggctgttga cgacaaattt gctatcgcct tttaccagtt cgcgatgctg aggctcgatg
     3961 gcgacggtaa aggtaacgcc tttgctggtg agtttacgat caataacctg gcctacctgc
     4021 acgccgtgaa gaatgagcgg ctgacccgta tcaataccgt aactttccgg cgcggtcagg
     4081 gtcagcgtca gaacatcagg ttcatgcagc agtgcttttt cgcctggcac aacaacgaac
     4141 tctttgcgtg gctcgccatc gccgggtacc aactcgaagg ttttgccagt cagcagggcg
     4201 ctgagattgg catcgctaag ggataatttc ggattacgta attcgatgcg ggtattttca
     4261 cgaagcaggg taacgacgct gggatcaact gtcatttccc cagtgacttt accaccagga
     4321 tttaaatcca gtttagttag ctgtccgact tccagtccct gatacattaa tggcgtcgag
     4381 tcggcggtta atccggcccc actcggcagt tccagtttga ttattacgcc acgctggcta
     4441 tgggcgaggt cttcatacag accaaaggta tcttccgcct cggcaggttt cgactcttct
     4501 ggtgaatcga aggcaatcgc accgttaacc agtgccgcca ggctttccag tttcaccttc
     4561 gcgccactga tactgacatt ggcatcaacg ccggaaacgt tccagaaacg gctacctttt
     4621 ttcaccagat cggtaaaacg ccgctcgatc aggacatcaa tcaccacgcc ttgtttgttg
     4681 ggattgatgg catagtcgta gacttttccc accgggatct tgcggaaata gaccaatgaa
     4741 ccgctgttca gcgaaccgag atcgggggct tgcaggtgga tcatcagatc gccattgtcc
     4801 agccgatatt tcggttgggt atcgagtgcg acaaagtgat cctgctcttt acctgtaccc
     4861 ggcatcatgc cgatatagtt cccaccgacg agggcgtcca gcccggagac acctgccaac
     4921 gatgcttttg gcgtcaccag ccagaattga gtctcttcgc gcagcgcatc tttcatatcg
     4981 gacttgatgc tgaccttgac ttcaatctta cgaagatcgt cgctgaggct gatatcctgc
     5041 actgttccga cttcaacgcc ctgataacga acaggcgtac ggcccgggac aataccatcc
     5101 gccgacataa agtcgatggt gacggtatta cttcggtcct gataactgtc ccaaatcagc
     5161 caaccggcaa tcattagcgc gatgaaaggc agcagccaga aaggtgagat acggcgttta
     5221 tttttaatct gcgcttcagt cgtcgaagcg ggcgtttcct gactcatgtg catcccaaag
     5281 taagcggctg tccagccatt ccacagcaag aatagtcaaa attacggctg cgccaaaata
     5341 aaacgcagcc ggtccgatag taaaagcgag gatctgatcg cgattaatca gcgacatggt
     5401 taaagatatg acaaacaggt cgagcatcga ccagcgtcca atccaggtca ccatccgcag
     5461 taacagaatg cgtgtgcgta aaccttgctg gcatttaaaa tgagtgctca acagtaaagt
     5521 gaacatgacg atcactttag taaacggtac cagaatactg gcgataaaca cgattccggc
     5581 gaccgcaatg ttgctacttg ccagcgacat aatcccggaa agaatcgtat cttcctgccg
     5641 gccaccattc agataaatga tagaaatagg caataggttg gctggtaaca acaaaacgat
     5701 tgacgctaac agcgccgccc agcatttttg caaactatga cgacgacgca ggcgtagcgg
     5761 gatatggcaa cgcgggcagc gaccacgctg atcaggatag ccggtaaaat ggcacccaag
     5821 acagacacga agtttctcgt ccctacgcgt agcggggcgc tgcggataat atcgctccca
     5881 cagctcctca acattaagat gtgacaacgt caccgtcgtt aaaatcacca acgccacaaa
     5941 agagaacaag ccgacacccg cctggatatg ggcataatcc tgtaccttta tagaagcaac
     6001 gccaatgccg accaggtaga tatccagcat tacccactct ttaagacgct caagcatcag
     6061 cagtaccgga cgtaaattca ttcccagtcg gttaccaaac cataaatatg ctatggagga
     6121 caccagaatg aggggggcac caataacgca gaaaaagacc atcgcccccg ttatcgtatc
     6181 gccctgtttg gtcatttgcc agatgccttg catgacgttt gcgtcgatac gaatacctaa
     6241 cagccagata tgcaacagcg gttcgcccca ggcaaacggc atcagcaaca gcatggtgaa
     6301 agccattgcc gccaggcgcg ttagcgacca gtcgcgcccg tcgcgaattt ttgcctgaca
     6361 gcgcggacaa taggcactct gatgagaatt tatctcgggc aggctaaaca gcatgtcaca
     6421 ttgcgggcaa cgttggtaat caccacgcgg cagttcctcg ccgattgacc tcactgttat
     6481 cttttttgtc ggcgtaattt gtggtgtgtt aagagccatg acgtgccaaa tgtaataaga
     6541 attaacatta atcttaaccc atgatgggaa tgatcttgag cattaacgca tttaatgctt
     6601 attttaatag gctggcagtt ccaggtaaga caaacaagtg attatataat gaacaaaaca
     6661 gaattttacg cggatttaaa tcgcgacttt aacgcgctga tggcgggaga aaccagtttt
     6721 ctggcaacgc ttgcgaacac cagtgcgttg ttatacgagc gtctcactga cgtaaactgg
     6781 gcaggttttt atttgcttga ggacgataca ctggtactcg gaccatttca gggcaaaatt
     6841 gcctgtgtcc ggatacccgt cgggcgcggg gtgtgcggca ctgcggttgc ccgcaatcaa
     6901 gtgcagcgta tcgaggatgt tcacgcgttt gacgggcata ttgcctgtga tgcggcgagt
     6961 aattctgaaa ttgttctgcc gctggtggtg aaaaatcaga ttattggtgt tcttgacatc
     7021 gatagtaccg tcttcggtcg ctttacagac gaggacgagc aaggcttacg tcagcttgtg
     7081 gcacagcttg aaaaagtgct tgcaacgacg gattacaaaa aattctttgc gagcgtcgca
     7141 ggataatcaa cggataacgt agcatttact ggtagcgtca ttataatgac gcctgttcat
     7201 gcctgcgctt gttggctacg tccgttgtaa tcaggaaatt tcatggaaaa tcaacctaag
     7261 ttgaatagca gtaaagaagt aatcgcgttt ctggccgaac gttttcccca ctgtttcagt
     7321 gcggaaggtg aagcgcgtcc gctgaaaatc ggtatttttc aggatttggt cgatcgtgtt
     7381 gccggggaaa tgaacctgag caaaacgcaa ttacgatccg ctttacgtct ctacacttcg
     7441 agctggcgtt atctttacgg tgttaaaccc ggcgcaacgc gtgtcgatct tgacggcaac
     7501 ccatgcggtg agctggacga gcaacatgta gagcatgctc gcaagcagct tgaagaagcg
     7561 aaagcgcgtg ttcaggcaca gcgtgctgaa cagcaagcga aaaaacgcga agctgccgca
     7621 gctgctggtg agaaagaaga cgcaccgcgc cgcgaacgca agccacgtcc gaccacgcca
     7681 cgccgcaaag aaggcgctga acgtaaacct cgtgcgcaaa agccggtaga gaaagcgcca
     7741 aaaacagtaa aagcacctcg cgaagaacag cacaccccgg tttctgacat ttcagctctg
     7801 actgtcggac aagctctgaa ggtgaaagcg ggtcaaaacg cgatggatgc caccgtatta
     7861 gaaatcacca aagacggcgt ccgcgtccag ctgaattcgg gtatgtcttt gattgtgcgc
     7921 gcagaacacc tggtgttctg aaacggaggc cgggccaggc atgaacatgt tttttaggct
     7981 taccgcgtta gctggcctgc ttgcaatagc aggccagacc ttcgctgtag aagatatcac
     8041 gcgtgctgat caaattccgg tattaaagga agagacgcag catgcgacgg taagtgagcg
     8101 cgtaacgtcg cgcttcaccc gttctcatta tcgccagttc gacctcgatc aggcattttc
     8161 ggccaaaatc tttgaccgct acctgaatct gctcgattac agccacaacg tgctgctggc
     8221 aagcgatgtt gaacagttcg cgaaaaagaa aaccgagtta ggcgatgaac tgcgttcagg
     8281 caaactcgac gttttctacg atctctacaa tctggcgcaa aagcgccgtt ttgagcgtta
     8341 ccagtacgct ttgtcggtac tggaaaagcc gatggatttc accggcaacg acacttataa
     8401 ccttgaccgc agcaaagcgc cctggccgaa aaacgaggct gagttgaacg cgctgtggga
     8461 cagtaaagtc aaattcgacg agttaagcct gaagctggca ggaaaaacgg ataaagaaat
     8521 tcgtgaaacc ctgacacgcc gctacaaatt tgccattcgt cgtctggcgc aaaccaacag
     8581 cgaagatgtt ttctcgctgg caatgacggc gtttgcgcgt gaaatcgacc cgcataccaa
     8641 ctatctttcc ccgcgtaata ccgaacagtt caacactgaa atgagtttgt cgctggaagg
     8701 tattggcgca gtgctgcaaa tggatgatga ctacaccgtt atcaattcga tggtggcagg
     8761 tggtccggca gcgaagagta aagctatcag cgttggtgac aaaattgtcg gtgttggtca
     8821 aacaggcaag ccgatggttg acgtgattgg ctggcgtctt gatgatgtgg ttgccttaat
     8881 taaagggccg aagggcagta aagttcgtct ggaaatttta cctgctggta aagggaccaa
     8941 gacccgcact gtaacattga cccgtgaacg tattcgtctc gaagaccgcg cggttaaaat
     9001 gtcggtgaag accgtcggta aagagaaagt cggcgtgctg gatattccgg gcttctatgt
     9061 gggtttgaca gacgatgtca aagttcaact gcagaaactg gaaaaacaga atgtcagcag
     9121 tgtgatcatc gacctgcgta gcaatggcgg tggggcgttg accgaagcgg tatcgctctc
     9181 aggtctgttt attcctgcgg gtcccattgt tcaggtccgc gataacaacg gcaaggttcg
     9241 tgaagacagc gataccgacg ggcaggtgtt ctataaaggc ccgctggtgg tactggttga
     9301 ccgtttcagt gcttcggctt cagaaatctt tgccgcggca atgcaggatt acggtcgtgc
     9361 gctggttgtg ggtgaaccga cgtttggtaa aggcaccgtt cagcaatacc gttcattgaa
     9421 ccgtatttac gatcagatgt tacgtcctga atggccagcg ctgggttctg tgcagtacac
     9481 gatccagaaa ttctatcgcg ttaacggcgg cagtacgcaa cgtaaaggcg taacgccaga
     9541 catcatcatg ccgacgggta atgaagaaac ggaaacgggt gagaaattcg aagataacgc
     9601 gctgccgtgg gatagcattg atgccgcgac ttatgtgaaa tcaggcgatt taacggcctt
     9661 tgggccggag ctgctgaagg aacataatgc gcgtatcgcg aaagatcctg agttccagaa
     9721 catcatgaag gatatcgcgc gcttcaacgc tatgaaggac aagcgcaata tcgtttctct
     9781 gaactacgct gtgcgtgaga aagagaataa tgaagatgat gcgacgcgtc tggcgcgttt
     9841 gaacgaacgc tttaaacgcg aaggtaaacc ggagttgaag aagctggatg atctaccgaa
     9901 agattaccaa gagccggatc cttatctgga tgagacggtg aatatcgcac tcgatctggc
     9961 gaagcttgaa aaagccagac ccgcggaaca acccgctccc gtcaagtaat atcaatcagg
    10021 cacaagaaat tgtgcctgat tttttaacag cggcaagatg ccgtaaatca gatgctacaa
    10081 aatgtaaagt tgtgtctttc tggtgactta cgcactatcc agacttgaaa atagtcgcgt
    10141 aacccatacg atgtgggtat cgcatattgc gttttgttaa actgaggtaa aaagaaaatt
    10201 atgatgcgaa tcgcgctctt cctgctaacg aacctggccg taatggtcgt tttcgggctg
    10261 gtactgagcc tgacagggat acagtcgagc agcgttcagg ggctgatgat catggccttg
    10321 ctgttcggtt ttggtggttc cttcgtttcg cttctgatgt ccaaatggat ggcattacga
    10381 tctgttggcg gggaagtgat cgagcaaccg cgtaacgaaa gggaacgttg gctggtcaat
    10441 actgtagcaa cccaggctcg tcaggcaggg atcgctatgc cgcaagtggc tatctaccat
    10501 gcgccggaca tcaacgcttt tgcaaccggt gcgcgccgtg atgcctctct ggttgctgtc
    10561 agcaccggtt tgctgcagaa catgagcccg gatgaagccg aggcggtaat tgctcacgaa
    10621 atcagccaca tcgccaatgg tgatatggtt accatgacgc tgattcaggg cgtggtgaac
    10681 accttcgtta tctttatttc ccgtattctg gcgcagcttg ccgcgggttt tatgggcgga
    10741 aatcgtgatg aaggtgaaga gagcaacggc aacccgctga tctactttgc ggttgcaacg
    10801 gttctggaac tggtgtttgg tattctggcg agcattatca ccatgtggtt ctcgcgtcat
    10861 cgtgaattcc atgctgatgc cggttcggca aaactggttg gtcgcgagaa aatgattgcc
    10921 gcgctgcagc gcctgaaaac cagctatgaa ccgcaagaag caaccagcat gatggctttc
    10981 tgcattaacg gtaagtcgaa atcgctcagt gagttgttca tgactcaccc gccgctggat
    11041 aaacgaattg aagctctgcg tacgggtgaa tacctgaagt aatatgaagt aaatactaaa
    11101 aagtgcgtcc tgatcgacgc gcttttttta tgccctggat cgtggctgag tgatacgtaa
    11161 accactgaca caggcagcaa tcactgccag aatagccgca gccatcagcg aaacgtgcgt
    11221 accattatca ccgaactgat ttagcatcag cgccaccagt gccgcgccgc tactctgacc
    11281 cagtagacga gccgttccta acatgccact ggctccaccg ctacgttcgc gaggagcgga
    11341 ggtaataatg gtgtggttat tgggtgactg gaacaagcca aatccagcgc cacataagat
    11401 catcggccag ataatattga tatccgcagg tgacgcgggc agcagaacca gggaaaaaag
    11461 ccccgcagcc atgatgaaca accctagagc acccagcaat cctgcatgta cgcgttcaat
    11521 caaatagcct gccaacggag ccatcaccat cgttgctaac ggccacggtg tcagaagtaa
    11581 acctgtttcg acttcactac gcccgagcac ggtttgcagg taaaagggca gggaaaccat
    11641 tgccagcatt tgtgcgcaga aagagcaaac agatgtgcaa atagaaagtg aaaacagcgg
    11701 gatacgcagt aaatccaccg gtagcagcgg tacgggaaga gaaagctggc ggcgaataaa
    11761 gaaaatacca acaacaacca ttaccaccag ttccgcagca attaacgtca gcgattgccc
    11821 ctgagcgaaa ccactcaacg cagtgataag caggccgaag gttaacgcgt tcatcacggc
    11881 gctgggcagg tcgaaacggg gtttactggc gcgagaacca ttgggtggca gaaaacgcat
    11941 cgccagaagc agggcgataa tacctaacgg tacgttgatt aaaaataacc atttccagga
    12001 tgcgatggag aggattgctg cagcaattgt cggcccggca gcagaagaga cggcaacaat
    12061 aaacgagttt atgcccatcc ctctccccag aaaacgttgt ggatagatca ggcggataag
    12121 tgcggtatta acgctcatca acgctgcacc gccgaaacct tgtatgacac gcgcaagggt
    12181 gagcatttgc agcgaatcag aaagggcgca gaacagtgaa gacaacagaa aaacgaccag
    12241 accgcattta taaatacgtc gatagccaaa catatcgccc agaaacgaaa acgagagcag
    12301 ggagatgaca atggcgattt gataggcgtt cactacccag atggaactgg ctggcgtggc
    12361 atgaaggtcc gtggcgattg ttggcagggc gacgttggcg attgcgccgt caaggacagc
    12421 catcgaaata ccaatcacaa tggttaatat cgcaccgtat cgctggggca atggcaggcc
    12481 gtcggcctga acttttggca taggaatttt atatctttgg tgaataatca acaggggtat
    12541 gattctagca ctgatattca cggtggatgt cgcagaattg taactaaccg gcaaaagatg
    12601 gattgcgacc cccctggtgc gaaattataa taaaaaacag ttctgatttt tataaaacac
    12661 tcgcaatgag gtgataaatg gctaacgcag atctggataa acagcctgat tctgtatctt
    12721 ccgtgctaaa agtttttggc attttgcagg cgctgggtga agagcgcgaa atagggataa
    12781 ccgagctgtc gcagcgcgtc atgatgtcaa aaagcaccgt ttatcgcttt ttacagacca
    12841 tgaaaacctt aggttatgtg gcgcaggaag gggagtcgga gaaatattcc ctgaccctga
    12901 aattgtttga actgggcgct cgcgcgttac aaaacgtcga tttaattcgt agcgcagata
    12961 tccagatgcg tgagatctcc cgcctgacca aagaaactat ccacctcggc gcactggacg
    13021 aagacagtat tgtttacatt cacaaaattg actctatgta caatttgcgc atgtattcac
    13081 ggattgggcg tcgtaatccg ctgtacagca ccgcgattgg taaggtactg ctggcatggc
    13141 gcgatcgcga tgaagtgaag caaattcttg agggcgtgga gtataaacgc agtaccgagc
    13201 ggaccatcac cagtacagaa gcgttattac ccgttctgga ccaggtgcgc gagcaggggt
    13261 atggcgaaga taacgaagag caggaagaag ggctgcgatg cattgcggta ccggtatttg
    13321 atcgctttgg cgtggtcatt gccggtttga gcatctcctt cccgacgttg cgtttctctg
    13381 aagagcgttt acaggaatat gtcgcaatgt tgcataccgc agcgcgcaaa atttctgccc
    13441 aaatgggtta tcacgactat ccgttctgat gagagtaaga acctgtcgga atatcaaaca
    13501 gacaggttct ttatttagca tgagaaaaat aaagttgaag gtgcgttata ttaaacgcgc
    13561 ttgctataag aatattttac tcatgagtga gaatctggtt atttattacc cttaaccatt
    13621 atcggccacg atattgcttt tacgtaacag tgggcaatct gttatcccca agaaaccatt
    13681 tttagtgtgc aagtattgta ccgtgctggt gcctctggca gtcagatagg tacattgcaa
    13741 acctaatcct gcggcattct ctttgcttcc aatcaaaacg ccatatccgc tgagtaataa
    13801 tcctatccat accagtgcta tcagcataac tgtgcgaatg atgaatcgca ttacaacctc
    13861 ttctcttttt atgttcgctt aatcgtagcg gcaatatgcg ctgaagcaag ctactcattc
    13921 cgaaaaagca cgaatatcga catagttagg cgctgtttaa ctaacgcatg ctagtttaat
    13981 gacataaggt aggtgaagcg gagattggag tgaaaaagtt tcgatgggtc gttctggttg
    14041 tcgtggtgtt ggcttgcttg ctgctttggg cgcaggtatt caacatgatg tgcgatcagg
    14101 atgtacaatt tttcagcgga atttgtgcca ttaaccagtt tatcccgtgg tgatatcatt
    14161 ttttcagcac tagattttct tcctctccag cagtggtaga atagcgcctc tactcagagg
    14221 tggtgaaatg aacgaagttg taaattcagg cgtgatgaac attgcgtctt tggttgtatc
    14281 ggtggtggtt cttcttatcg ggctcatctt gtggtttttt atcaatcgtg ccagttcacg
    14341 gactaacgaa cagattgaac tgcttgaggc gttgctggat cagcaaaaac gtcaaaatgc
    14401 actgttacgt cgtttgtgcg aagcaaacga accagagaaa gcagataaaa agaccattga
    14461 gagtcaaaaa tcggttgatg acgaagatat tattcgcctg gtcgccgaac gataatcctt
    14521 cctcaatctt gagtaacccc gtcgttgaag ggttactcaa ttcatcctga ttatacgcac
    14581 tgtcatggtg caactgcttc aaattaaaac tctggtctga cttcagataa ttatcatatt
    14641 atttatttgc gtaacgggat atcagaaaaa gatattttcc tcattaattt attaggatgt
    14701 ttacatcgga tttgtgatta agcgtggtat tatttattag cgaaacgttt ctctcttgat
    14761 ttttttgctc attcatcaat ttttcttatt tta
//
LOCUS       DADMHC010000094        14715 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.094, whole genome shotgun sequence.
ACCESSION   DADMHC010000094 DADMHC010000000
VERSION     DADMHC010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14715)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14715)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14715
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.094"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            2..154
                     /locus_tag="JNZ57_002368"
     CDS             2..154
                     /locus_tag="JNZ57_002368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015386348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828572.1"
                     /translation="MLLSPLTTYAKNYPCSGKKGGVSHCTSDGKFVCNDGTISKFKKI
                     CTKNSR"
     gene            415..1395
                     /locus_tag="JNZ57_002369"
                     /pseudo
     CDS             415..1395
                     /locus_tag="JNZ57_002369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226013.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
     gene            complement(1500..2036)
                     /locus_tag="JNZ57_002370"
     CDS             complement(1500..2036)
                     /locus_tag="JNZ57_002370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HAY8828573.1"
                     /translation="MRRANDPQRREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGS
                     MTYYFSGIDELLLEAFSSFTEIMSRQYQAFFSDVSDAQGACQAITDMIYSSQVATPDN
                     MELMYQLYALASRKPLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTD
                     RKPLSREEILRMVERVAG"
     gene            2120..3328
                     /locus_tag="JNZ57_002371"
     CDS             2120..3328
                     /locus_tag="JNZ57_002371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8828574.1"
                     /translation="MTVNSSRNALKRRTWALFMFFFLPGLLMASWATRTPAIRDILSV
                     SIAEMGGVLFGLSIGSMSGILCSAWLVKRFGTRNVILVTMSCALIGMMILSLALWLTS
                     PLLFAVGLGVFGASFGSAEVAINVEGAAVEREMNKTVLPMMHGFYSLGTLAGAGVGMA
                     LTAFGVPATVHILLAALVGIAPIYIAIQAIPDGTGKNAADGTQHGEKGIPFYRDIQLL
                     LIGVVVLAMAFAEGSANDWLPLLMVDGHGFSPTSGSLIYAGFTLGMTVGRFTGGWFID
                     RYSRVAVVRASALMGALGIGLIIFVDSAWVAGVSVVLWGLGASLGFPLTISAASDTGP
                     DAPTRVSVVATTGYLAFLVGPPLLGYLGEHYGLRSAMLVVLALVILAAIVAKAVAKPD
                     TKTQTAMENS"
     gene            3328..4143
                     /gene="ybjI"
                     /locus_tag="JNZ57_002372"
     CDS             3328..4143
                     /gene="ybjI"
                     /locus_tag="JNZ57_002372"
                     /EC_number="3.1.3.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(5-phospho-D-ribitylamino)uracil
                     phosphatase"
                     /protein_id="HAY8828575.1"
                     /translation="MSIKLIAVDMDGTFLSDQKTYNRERFMAQYQQMKAQGIRFVVAS
                     GNQYYQLISFFPEIANEIAFVAENGGWVVSEGKDVFNGELSKDAFTTVVEHLLTRPEV
                     EIIACGKNSAYTLKKYDDAMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQ
                     VQKALHEAIGDIMVPVHTGNGSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGGN
                     DIEMLRQAGFSFAMENAGSAVVAAAKYRAGSNNREGVLDVIDKVLKHEAPFDQ"
     gene            4229..4513
                     /locus_tag="JNZ57_002373"
     CDS             4229..4513
                     /locus_tag="JNZ57_002373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828576.1"
                     /translation="MIMKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSV
                     PQAVSVATVPQTVYVAPAPAPAYRPHPYARHLASVGEGMVIEHQIDDHHH"
     gene            complement(4554..5783)
                     /gene="mdfA"
                     /locus_tag="JNZ57_002374"
                     /pseudo
     CDS             complement(4554..5783)
                     /gene="mdfA"
                     /locus_tag="JNZ57_002374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308949.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdfA"
     gene            6068..6664
                     /gene="ybjG"
                     /locus_tag="JNZ57_002375"
     CDS             6068..6664
                     /gene="ybjG"
                     /locus_tag="JNZ57_002375"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HAY8828577.1"
                     /translation="MLENLNLSLFSLINATPDSAPWMISLAIFIAQDLITVVPLLAAV
                     LWLWGLTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFP
                     SDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIG
                     CLSAQIIWQAMGHKLYQRLQSWYRFCFALPIRKGWVRD"
     gene            6722..7480
                     /gene="deoR"
                     /locus_tag="JNZ57_002376"
     CDS             6722..7480
                     /gene="deoR"
                     /locus_tag="JNZ57_002376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor DeoR"
                     /protein_id="HAY8828578.1"
                     /translation="METRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNN
                     HSAPVVLLGGYIVLEPHSASHYLLSDQKSRLVEEKRRAAKLAATLVEPDQTLFFDCGT
                     TTPWIIEAIDNEIPFTAVCYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQT
                     LNNFCPDIAFYSAAGVHVSKGATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPA
                     RMGDLKRFDIVVSDCCPEDEYVKYAQTHRIKLMY"
     gene            complement(7527..8729)
                     /gene="dacC"
                     /locus_tag="JNZ57_002377"
     CDS             complement(7527..8729)
                     /gene="dacC"
                     /locus_tag="JNZ57_002377"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
                     /protein_id="HAY8828579.1"
                     /translation="MTQYSSLLRGLAAGSAFLFLFAPTAFAAEQTVEAPSVDARAWIL
                     MDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGN
                     PALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAK
                     KLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQP
                     NRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEK
                     LLTWGFRFFETVTPIKPDATFVTQRVWFGDKSELNLGAGEAGSVTIPRGQLKNLKASY
                     TLTEPQLTAPLKKGQVVGTIDFQLNGKSIEQRPLIVMENVEEGGFFGRMWDFVMMKFH
                     QWFGSWFS"
     gene            9022..9600
                     /locus_tag="JNZ57_002378"
     CDS             9022..9600
                     /locus_tag="JNZ57_002378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000956670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HAY8828580.1"
                     /translation="MLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDE
                     SDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLV
                     RTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNV
                     GLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS"
     gene            complement(9597..10712)
                     /locus_tag="JNZ57_002379"
     CDS             complement(9597..10712)
                     /locus_tag="JNZ57_002379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HAY8828581.1"
                     /translation="MHRQSFFLVPLICLSSALWAAPATVNVEVLQDKLDHPWALAFLP
                     DNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFVQSRRIWL
                     SYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYL
                     FIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGARAEIWSYGIRNPQG
                     MAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAG
                     TEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRI
                     LTDRGQRIRDVRTGPDGYLYVLTDESSGELLKVSPRN"
     gene            complement(10823..11206)
                     /gene="bssR"
                     /locus_tag="JNZ57_002380"
     CDS             complement(10823..11206)
                     /gene="bssR"
                     /locus_tag="JNZ57_002380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator BssR"
                     /protein_id="HAY8828582.1"
                     /translation="MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRD
                     NFFKLNRELHDKSLRLNLHLDQEEWSALHHAEEALATAAVCLMSGHHDCPTVITVNAD
                     KLENCLMSLTLSIQSLQKHAMLEKA"
     gene            11420..12745
                     /gene="rimO"
                     /locus_tag="JNZ57_002381"
     CDS             11420..12745
                     /gene="rimO"
                     /locus_tag="JNZ57_002381"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HAY8828583.1"
                     /translation="MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD
                     ADMVIVNTCGFIDSAVQESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITG
                     PHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIP
                     SMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGKPVKTS
                     MVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMK
                     RPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCF
                     KYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE
                     EGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV"
     gene            complement(12792..14120)
                     /locus_tag="JNZ57_002382"
     CDS             complement(12792..14120)
                     /locus_tag="JNZ57_002382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HAY8828584.1"
                     /translation="MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVID
                     TAFAVANIAEYRRSVAIDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSD
                     ECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLE
                     RFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVF
                     AYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDG
                     GLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNI
                     NDTFGHLLGDEVLMKVVKILKSQIPVDKGKIYRFGGDEFAVIYTGGTLEELLSILKEI
                     VHFQVGSINLSTSIGVAHSNECTTVERLKMLADERLYKSKKNGRAQISWQ"
     gene            complement(14128..>14715)
                     /locus_tag="JNZ57_002383"
     CDS             complement(14128..>14715)
                     /locus_tag="JNZ57_002383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HAY8828585.1"
                     /translation="GFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNE
                     PHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGT
                     GLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDV
                     ARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE"
BASE COUNT         3754 a         3712 c         3495 g         3754 t
ORIGIN      
        1 tttgttatta agcccactaa ctacctatgc taaaaattat ccttgttctg ggaaaaaagg
       61 aggtgtctct cactgtacct ccgatggaaa atttgtttgc aatgatggaa ctattagtaa
      121 attcaaaaaa atctgtacta aaaactcacg ataacttttg cttttatatc tgcgtctaaa
      181 ataaaaatga gccgcaggtt aaccgcaaaa gttacatgct cacatagcaa aaagaatagc
      241 caacttcatt atggcttcag tgagatgtat ggtcgtagga tttcatacat tgacactggt
      301 tatacataca gtaaaaatac tctctactgg agggcatttt ttatggcagt acgaaaactc
      361 accactggga aatggctttg cgaatgttac cccgccggac gaagtgggcg tcgtgtgcgt
      421 aaacaattcg ccaccaaagg tgaagcactg gcttttgagc gccacatgat ggaagaaacc
      481 gaagcaaagc cctggctggg tgaatcagtg aatcgtcgaa cactgaaaga cgtggttgag
      541 ctatggttca aactacatgg taaatctctg acagctgggc agcatgtcta tgacaaattg
      601 ctgttgatgg ttgacgctct gggcaatcct cttgcaaccg atctcacctc taaaatgttt
      661 gcccactatc gagataaaca cctgacaggc gagatctact tcagcgagaa atggaagaaa
      721 ggagcaagcc cggtcaccat taacctggag caaagctatc taagtagtgt ttttagcgaa
      781 ctatcccgtc tgggcgaatg gtcgtatccg aacccactgg agaacatgcg aaaattcacc
      841 atcgcagaaa aagagatggc atggcttacc catgagcaga ttgttgaatt gctggctgat
      901 tgcaaacgtc aggacccaat tctggcactg gtagttaaga tatgcttaag cacaggcgca
      961 cgctagcgtg aagccgtaaa tcttacccgc tcacaggtga ccaaataccg aattaccttt
     1021 gtcagaacga aggggaagaa aaacagaagc atccctatca gtaaagagct ttacgaagag
     1081 atcatggcgc ttgatgggtt caatttcttc acagactgct attttcaatt tttatccgtg
     1141 atggaaaaaa cgtctatcgt gctccctcgc ggtcaactca cacacgttct gcgccatacg
     1201 tttgcggcgc acttcatgat gtcgggtgga aacattctgg ccttacaaaa aattctcgga
     1261 caccacgata taaaaatgac tatgcgttac gcacatctgg caccggatca tctggaaacg
     1321 gcgctccgtt tcaatcctct ggcaacgctg ccaagtggcg acaaagtggc ggcagcggtt
     1381 ggcattaccc cgtaataacc accactgacc accaacctaa cttattgttt ttaatctaac
     1441 ttattgtttt cattaacccg tttacataaa tgggtttttt gttatctaaa atttatctac
     1501 taccctgcaa ccctctcaac catcctcaaa atctcctcgc gcgatagcgg cttacggtcg
     1561 gtgacaaaat gcagcgtcat cccctcaata aacgcatcaa gcgcgcgggc ggttccgggt
     1621 tcaaaccatt gttcgagcgt ttgctgactg cgctgcatcc agttttgcat taccgttttt
     1681 aatagcggtt ttcggctagc cagcgcgtag agctggtaca tcagctccat attatccggc
     1741 gttgcaacct gtgagctgta gatcatatcg gtgattgcct ggcatgcgcc ttgagcatca
     1801 ctaacatcgc taaaaaatgc ctgatattgc cgggacataa tctcagtaaa actgctgaac
     1861 gcctccagca acaactcatc aattcctgaa aaatagtagg tcatcgatcc caacggtacc
     1921 ccggcaaggg tagcaatttt gcggtgcgta acagcatgta ttccgtaaag tttcaccgcc
     1981 tccagcgtgg cctggataat tttttctcgc cgttgcggat cgttagcgcg acgcatgtca
     2041 tttcctctgt ctgcaattgt gtacaaatgt acacaacctt gctaatgttg tcttccctct
     2101 tcttattttg acgtgatcta tgaccgtaaa ttcttcacgt aatgcattga aacgccgaac
     2161 ctgggcgctg tttatgttct tctttttgcc aggcctgtta atggcgtcct gggcaacccg
     2221 tacgcctgct atccgcgata ttctctctgt ctcgatcgct gaaatgggcg gtgttctctt
     2281 tggtctgtcg atcggttcga tgagcggtat tctctgctcg gcgtggttag tgaaacgctt
     2341 tgggacacgt aatgtcatcc tggtcacgat gtcctgcgca ttgatcggga tgatgatatt
     2401 aagtctggca ctctggctga catcgcccct gctctttgcc gttggtctcg gcgtctttgg
     2461 ggcaagtttt ggttctgcgg aagtggcgat aaacgttgaa ggtgccgccg ttgagcgaga
     2521 aatgaataaa acggttttgc cgatgatgca cggtttttat agcctgggca cgctggcagg
     2581 cgctggtgtc gggatggcac tgacggcctt tggcgttccg gcaacggtgc acattttatt
     2641 ggcggcgctg gtaggtatcg cgcctattta tatcgccatt caggcaatcc ctgacggtac
     2701 gggcaaaaat gctgccgatg gcacccagca tggcgaaaaa ggcattcctt tttatcgcga
     2761 tatccagttg ctgttgattg gtgttgtagt gctggcgatg gcctttgccg aaggttctgc
     2821 caacgactgg ttacccttat taatggttga cggtcacggt tttagcccta cttccggctc
     2881 gctgatttat gccggtttta ccctggggat gaccgttgga cgcttcactg gcggttggtt
     2941 catcgaccgt tacagtcgcg ttgccgtggt tcgggccagt gcactaatgg gggcgttggg
     3001 tattgggctg attatttttg tcgatagcgc ctgggtcgct ggggtgtctg ttgtactctg
     3061 gggactgggt gcctcgctgg gcttcccgct gaccatttct gccgccagcg ataccggccc
     3121 cgatgcacca acccgcgtca gtgtggtagc aacgaccggt tatctggctt tcctcgtcgg
     3181 gccgccgctg ctgggctatc tcggcgaaca ttatggatta cgtagtgcaa tgctggttgt
     3241 actggcgctg gttattctcg cggctattgt cgcgaaagcc gtcgccaaac ccgataccaa
     3301 aacgcagacg gcgatggaga atagttgatg agcattaaat taattgcggt agacatggat
     3361 ggtactttct taagcgatca aaaaacctat aaccgtgagc ggtttatggc tcagtatcag
     3421 caaatgaaag cacaaggcat tcgctttgtg gtcgccagcg ggaatcaata ttatcagttg
     3481 atctctttct tccctgaaat tgctaatgaa attgcctttg tggctgaaaa cggcggctgg
     3541 gtagtgagtg aaggcaaaga tgtttttaat ggcgagctgt cgaaagatgc ctttactact
     3601 gtcgtggaac atttgctgac gcgcccggaa gtggaaatta ttgcctgcgg aaaaaatagc
     3661 gcctatacgc tcaaaaaata tgacgatgcc atgaaaacgg tggcggaaat gtattatcac
     3721 cgtctggaat acgtcgataa ctttgacaac ttagaagata ttttctttaa gtttggcctg
     3781 aatctttccg atgaactgat tccacaagta caaaaagcat tacatgaggc catcggcgat
     3841 attatggtgc cagtccacac cggcaacggc agcatcgatc tgattatccc cggcgtacat
     3901 aaagccaatg gccttcgcca actgcagaaa ttatggggaa tagacgacag cgaagtggtg
     3961 gtctttggcg atggcggtaa cgatattgag atgctgcgtc aggcaggctt tagttttgca
     4021 atggaaaatg ccggcagcgc ggtcgtcgca gcggcaaaat accgggcagg ctccaataac
     4081 cgtgaaggcg tactggatgt gatcgataaa gtgcttaaac acgaagcgcc atttgaccaa
     4141 taaaaacggc agcacgcccg gcaacacaat acctgaatga aggctgcata attcgcagaa
     4201 attaacccgc tgcattattt caggcgaaat gattatgaaa aattgtctac tgttgggcgc
     4261 gcttttaatg ggctttactg gtgtggcgat ggcgcaaagt gtcaccgtcg atgtgccgag
     4321 tggatacaaa gtggttgtag ttcctgattc agtcagcgtt ccacaagcgg tcagcgtcgc
     4381 gactgtgccg caaaccgtct atgtggctcc tgcgccagct ccggcttacc gcccgcatcc
     4441 ttatgctcgc catcttgcca gcgtaggtga agggatggtt atcgaacacc agattgacga
     4501 ccatcaccat taattcgaga atgcctgatc gcacaaagca gtcaggcatt tttttaccct
     4561 tcgtgagaat ttcccatctg tttatctttt aaaaagataa ccatcagcga cagccacaaa
     4621 attccgttga caaggttgaa gagattaaac tgtccgttgc ccccgttcag ccaggcatgt
     4681 ttgctgattt caataccaac ggtaaagatc agcatttgca gcattcccat cgcagcagaa
     4741 accgtacctt tactcatatc gctggcaaac agggttaatc gcaccagtcc cgcattcgcc
     4801 agaccaatac cgaaagcata aatacttaac ccggcagtca tccataaata cgcgtgcgat
     4861 gagataaccg ttgccgcagc agcgaccaac agaccaatca taatcggcca gccgcccata
     4921 attatcagcg aacgtacggt gcggcgcgag gtcagacgcg ctaacagcaa gttacccgca
     4981 attaacgccc cgaaaatagg cacttgcagc aagccatatt catagctgct caactgctcg
     5041 ccggtaatga tgataatcgg cgactgggcg atccacgcca gcaatggcag gctaacgaat
     5101 cccagcgcca gcgcccccgc cacaaagcgg ccgttcttca gcaccagctt atagtcacga
     5161 ccgagttctt tcagtgacag tttctcgcct atacgcgtgg cggtttcagg catagctcgt
     5221 tgcagaccga aaaaggagat cgctgccaat gcggcaaaca aaacaaacat cccctcccag
     5281 ggcagcacat ggatccacgc cgcgcccacc agcggaccaa gtagcggagc aatcagcgcc
     5341 acgttcgcca tcagcgcggt gatcttgata caaaccgcct cttcgaaaga ttcctgaatt
     5401 gcggcgtatc ccacagcgcc aatgaaacag aggcttatgc cctgcaagaa gcgcaacaga
     5461 gtgaattgtt caatgttttg cgccagtaat attgccagac aggtgatgat aaaccacacc
     5521 cccccgccag catcaccgga cggcgaccaa tacgatccga cagcggcccc aggagccatt
     5581 gtaaaaacat cccgcccgcc agatatgcgg tcattgaagt aggaacccaa tcaatgcccg
     5641 cctgatattg ttccaccacg gccaacatac cgggttgaat catatctgcc gatataggtt
     5701 gaaaattcgt aaagcaccag acagagaggg aaaagtaacg cctgacgtcc aagcctggca
     5761 ccggaagcta atttattttg catgcaattt cttcgccaat aataatcgcg cagagtttaa
     5821 taaaagcgca gctaacgaga aagcgaattt tgtagctgaa accacggtta agcacattct
     5881 tacattattg cgagtatagc tacgctttct ttaagtttta tttaacctat gcccgttaca
     5941 atcacccacc gtaaacaggc cgcttgaggg aaataagacg atgccgcttt acccagttta
     6001 acctgcactt tattctcaac gacttgcctg tattggctcc cttttaatca ctttgcgtcg
     6061 ggaagttatg ctggaaaatt tgaatctctc tctattctct cttattaacg cgacgccaga
     6121 ctcggctccg tggatgatct cgttggcgat ttttattgct caagatttga ttaccgtggt
     6181 gccgctgctg gccgcggtgc tttggttgtg ggggcttaca gcacaacggc aactggtgat
     6241 aaaaatcgct atcgcgctgg cggtcagcct gtttgtgtcc tggacgatgg gacatctttt
     6301 tccgcacgac cgaccctttg tcgaaaatat cggctataac ttcctgcatc atgcggcgga
     6361 tgactcattc ccaagcgacc acggtacggt gattttcacc tttgcactgg catttttatg
     6421 ctggcatcgc ctgtggtccg gctcactttt aatggtgctg gccgtcgtca ttgcctggtc
     6481 gcgcgtttat cttggcgtcc actggccgct ggatatgctc ggtggattgc tggcaggtat
     6541 gattggctgc cttagtgccc agattatctg gcaagcgatg gggcataaac tctatcaacg
     6601 tctgcaatcg tggtatcgct tctgttttgc attaccgatc cgcaaaggct gggtgcgtga
     6661 ctgatctctg ctaaaaagtg tagtattgag cggctcgctt caataactat tcagagggat
     6721 tatggaaaca cgtcgcgaag agcgtatcgg gcagctgctg caagaattaa aacgcagcga
     6781 taagttacat cttaaagacg ccgccgccct gcttggggtt tcggagatga cgattcgtcg
     6841 cgatctgaac aaccacagtg cgcccgtcgt tttgctcggc ggctatattg ttctggaacc
     6901 gcatagtgcc agccattacc tgttaagcga tcaaaaatcc cgcctggtgg aagaaaaacg
     6961 ccgggcggca aaactggctg cgacactggt agaacccgat cagaccctct tttttgactg
     7021 tggcaccacc acgccgtgga ttattgaagc gattgataat gaaatccctt ttaccgccgt
     7081 ttgttattcg ctaaatacct ttctggcgct gaaagagaaa ccccattgcc gcgcatttct
     7141 gtgcggtggt gaatttcacg ccagcaacgc cattttcaaa cccatcgatt ttcagcaaac
     7201 gttgaataat ttttgcccgg atatcgcttt ttattccgcg gcgggcgtgc atgtcagtaa
     7261 aggcgctacc tgttttaatc ttgaagagtt gccggtaaaa cactgggcca tgtcgatggc
     7321 gcaaaagcat gtgctggttg tcgaccacag taaatttggc aaggtccgtc cggcgcgcat
     7381 gggtgacctg aaacgctttg atattgtggt gagtgattgt tgcccggaag atgagtatgt
     7441 gaagtacgcg cagacgcacc gtattaagtt gatgtattaa tgacgtataa ccggatgacg
     7501 tttcgcgcca tccggttatc agaagattaa gagaaccagc tgccgaacca ctgatggaat
     7561 ttcatcatca cgaaatccca catccgacca aagaatccgc cctcttccac attttccatc
     7621 acgatcagcg gacgctgctc aatggattta ccgttaagct ggaaatcaat ggtcccgaca
     7681 acctgacctt ttttcagcgg tgcggtaagc tgcggttccg ttaacgtgta gctcgccttc
     7741 aggtttttca gctgcccacg cggtatggtc actgagcccg cttcgcctgc cccgagattc
     7801 agttcgctct tatcaccaaa ccagacgcgc tgagtcacaa aggtggcatc aggtttaatt
     7861 ggcgtcacgg tttcaaagaa gcggaaaccc caggtcaata atttctcaga ctcattaaaa
     7921 cggatacggt cagttttcgc ccccaacact acggagatta aacgcatatc gccctgggta
     7981 gccgaagcaa ccagattata tcccgcgcct gccgtggttc ctgtcttcat gccatcaaca
     8041 ttcagattgc tgctccacag cagacggtta cggttaggct gacgaatttt gttgaaggtg
     8101 aactctttct ctttatgaat ggcgtactct tccggcacat cgtggatcaa tgctttaccc
     8161 agcaatgcca tatcgcgcgc ggtactgaac tgccccggcg catccaggcc gtgcaccgtc
     8221 tggaaggtag tgttggtcag acccagtttt ttggcataac cattcatcag accaataaat
     8281 gactcctggc tcccggcaac gtaatcggcc agcgcaatac aggcgtcatt accggactgg
     8341 ataatcacac ctttgttcaa gtctgccacc gaaacctgat cgcccggttt gaggaacatt
     8401 accgatgaac cacgcagtgc cggatttccc gtcgcccagg catctttacc gaccgtcacc
     8461 atatcggtga gtttaatctt atcggcctta agcgcctgcc caaccacata gctggtcatg
     8521 attttagtca ggctcgcggg atccagtttc tcatccgcat tgccttctgc cagcacttta
     8581 ccgctggcgt aatccattaa aatccatgca cgcgcatcca cgctcggcgc ttcaacggtt
     8641 tgttcggccg cgaatgccgt tggggcaaaa aggaataaaa atgcagaacc cgctgcaaga
     8701 ccacgaagga gagaggagta ttgcgtcata aatgccaccc gagtatccat tcaaaaaaat
     8761 acgttatatc gccgtatgat aagttcggtg attaataacg cacacacaaa cttaaagaaa
     8821 ccgtaagttg gtaaagtttt taaagtttat gcaatatcct gccgcttcgc tgcttctggt
     8881 gtcatttttt tgccagctgt tgcttaaaag ttaactttac ttcaccatcg gagtcctgtt
     8941 cagcctgtgg ctgcctgtcg gaaaaggggt gagtatgatt acgctgtggg gtcggaataa
     9001 ttcaaccaac gtaaaaaagt attgctgacg ctcgaagaac tggaactacc ttatgagcaa
     9061 attctcgcgg gccgtgagtt tgggataaat cacgatgctg attttctggc gatgaaccct
     9121 aacgggctgg tgccgttgtt gcgtgacgac gaaagtgatc tcattctttg ggaatcaaac
     9181 gccattgtcc gctatctggc ggcacagtac gggcaaaaac gcctgtggat cgactcaccg
     9241 gcacgtcgtg cggaagcgga aaaatggatg gactgggcaa accagacgct cagtaatgcc
     9301 catcgaggga tcctgatggg attagtcaga acaccaccgg aagagcgcga tcaggccgcc
     9361 attgatgcca gttgcaaaga gtgcgacgcc ctgtttgccc tgctcgatgc ggaactggca
     9421 aaagtaaaat ggttctctgg cgacgagttt ggtgtgggcg atatcgctat cgcaccgttc
     9481 atctacaatt tgtttaacgt tggcctgacc tggacaccgc gtccaaatct gcaacgctgg
     9541 tatcagcaac tcactgaacg ccccgcagtg cgcaaagtgg tgatgattcc cgttagctaa
     9601 ttgcgtgggc taactttaag taattcccca ctggactcgt cggtgagaac gtataaataa
     9661 ccgtcgggtc cagtgcgaac atcacgaatt cgctgccctc tgtccgttaa aatacggcca
     9721 tcttctgtca ctttgtcgcc gttgacgctc atcacaatga catctttatc tttcagcgcg
     9781 ccaataaata atttttgctg ccactggggg aatttatcgc tgttatagaa ggccatgccg
     9841 ctcacagcgg gcgaatcttt ccagtaaaaa acaggttgct cggtcccggc gacgatctcc
     9901 cctttcgctt ccggtatctt aaagcctgaa tagttgattc cccaggttgc cagcggccag
     9961 ccgtagtttt tgcctttttg cgggatatta atttcatcac caccgcgcgg gccatgttca
    10021 ttcagccaca gtgcattact ccacggattc atcgccattc cttgcggatt acgaatgcca
    10081 taagaccaga tctcggcgcg cgcaccggat tcctttataa aaggattatc atccgggatt
    10141 tcgccctgat cggtcagacg caccagtttg ccctgtaatt tatccagatc ctgcgccgtc
    10201 gggcgctgat tgttttcgcc cagagcaata aaaagataac ctttaccgtc gaataccagc
    10261 cgcccgccaa aatggttgcc ggtagacagt tttggcatct ggcggaagac ggtgcggaag
    10321 tcggtcactt ttgagagatc atcacttaag cggccataac ccacagcagt tccggctttg
    10381 ccatcatcgc caacttcgga ataacttaac cagatgcggc gagactgaac aaaatcaggc
    10441 gctaaaacca cgtccagcag gccgccctgc ccgtgcgccc aaacgtccgg aactccggaa
    10501 agcggcgcag ataatccttt tcctgcttgc caatgacgca actcgccgcc gcgcagagtg
    10561 attaacatac cgtgattatc gggtaaaaag gccagtgccc agggatggtc gagtttgtct
    10621 tgcagtactt cgacatttac cgttgcagga gccgcccaga gagcggaaga aagacaaata
    10681 aggggcacaa ggaaaaagga ttgtcgatgc ataacgcctc cggattgact ctggcttaaa
    10741 gcgtagtcag tggaggagat aacaaattca tttttacaaa aacttaaaca tgaaggggga
    10801 gacgctttct cccccttagt tttcaggcct tctcaagcat ggcgtgcttc tgcaggctct
    10861 ggatactcag cgttaagctc atcagacaat tttcaagctt atcggcgttg acggtaataa
    10921 cagtcgggca atcatggtgc ccactcatca aacatactgc ggctgtcgct aatgcttctt
    10981 cagcatgatg aagagcactc cactcttcct gatccagatg aagattcaac cgcagcgatt
    11041 tatcgtgcag ttcgcgattc agtttaaaaa agttatctcg tagatgattg ctttcgctga
    11101 cggacatgta tccttttgcc ttcctcagtt gcacgtatgc agcgaggtca acgcgtgcgt
    11161 cgatcaaccg gttcagcaga tcgattcgct gtctgtcaac gaacatactt cgatcctcct
    11221 ctttccagcc ttgttgcaat taaatagtat ggctattttt ttgagcaaaa tgctgtccag
    11281 gatcaattct tcacgccgaa ttaacaaaat ttacatttcc ttcgcctccg ccagcgaatg
    11341 agattgcgat acaaatttta tccagaactc tgtagaatcc ctgccctgac ctttcctgta
    11401 actgaatatt ttttaagcta tgagcaaagt aactccccag ccgaaaatcg gctttgtttc
    11461 ccttggctgt ccgaaaaacc ttgtcgattc agagcgtatt ctcaccgaac tccgcactga
    11521 aggttatgac gtggtaccga gctatgacga tgcggacatg gtgatcgtca acacctgcgg
    11581 ctttattgac agcgcggtac aagaatcact ggaagccatt ggtgaagcgt tgaatgaaaa
    11641 cggcaaggta attgtgaccg gttgtctggg ggcaaaagaa gatcagatcc gcgaagtcca
    11701 cccgaaagtg ctggaaatca ccgggcctca tagctatgag caggttctgg agcacgttca
    11761 tcactacgtg ccaaaaccga aacacaaccc attcctgagc ctggtgccag aacaaggtgt
    11821 gaaactgacg ccgcgtcatt atgcctatct gaaaatttcg gaaggctgta atcaccgctg
    11881 caccttctgc attattccgt ctatgcgcgg cgacctggtg agccgtccga ttggcgaagt
    11941 gttaagtgaa gcgaaacgtc tggtagatgc gggcgttaaa gagattctgg tgatctcgca
    12001 ggatacttcc gcctatggcg ttgatgttaa acatcgtact ggcttccaca acggcaagcc
    12061 ggtaaaaacc agcatggtca gcctgtgcga acagttatcg aaactgggga tctggacacg
    12121 tctgcactac gtttaccctt atccgcatgt ggacgacgtc atcccactga tggcagaagg
    12181 caaaatcctg ccgtatctgg acattccgtt gcagcacgcc agcccgcgca ttctcaaact
    12241 gatgaagcgt ccgggttctg tagatcgcca actggcgcgc atcaaacagt ggcgcgaaat
    12301 ctgcccggaa ctgaccctac gctcaacctt tattgtcggc ttccctggcg agacagaaga
    12361 agatttccag atgctactcg acttcctgaa agaagcgcgt ctggatcgcg ttggctgctt
    12421 taaatacagc ccggttgaag gtgcagacgc caatgccctg cctgaccagg ttccggaaga
    12481 agttaaagaa gaacgctgga accgtttcat gcagctgcag cagcagattt ccgccgagcg
    12541 cctgcaagag aaagtgggcc gtgaaattct ggtgattatc gacgaagtgg acgaagaagg
    12601 cgcgattggt cgcagcatgg cagatgcacc ggaaatcgac ggcgcggttt atctcaatgg
    12661 tgaaaccaac gttaagccgg gtgatatcct gcgtgtgaaa gtcgagcacg ccgatgagta
    12721 cgatttgtgg ggtagccggg tttaattaat tcaggccggg caaaatcatt tgtccggcct
    12781 gcgaataatg attactgcca gctaatctga gccctgccgt ttttcttact cttatacagc
    12841 cgctcatccg ccagcatttt caagcgttcg acggtggtac attcatttga atgcgctaca
    12901 ccgatactgg tacttaaatt aatgcttccc acctggaaat gaacgatttc ttttagaatc
    12961 gacagcaact cttccagcgt tccacccgta taaatcaccg caaattcgtc accgccgaag
    13021 cggtagattt tacctttatc taccgggatc tgtgatttaa ggattttcac cactttcatc
    13081 aacacttcat cgcccagcaa atgaccgaag gtgtcgttaa tgtttttgaa tttatcgacg
    13141 tcaaacaggc acaaataacc gcctttttcc ggcagcgctt ttaaatcttc gtcaaaggat
    13201 tttctgccca ttgctttggt caggtcgtcc aggaacgccg agttatacat actgtagagt
    13261 tttttgacat cggcagccga aaagaaaagc ccgccatcca gtacgcgttc aaaatggtta
    13321 ttaatgatgg cttctttctc cacaatacca cgattaatca ctctgcgtac cagatagagg
    13381 caactggcac ccgatatcac agccaccaat gcggcaaaga aaataatcaa tgtacagacc
    13441 cgcaaataaa catctttttt atacgcaaat acgtacaatc cggtcggcaa ataggcgaag
    13501 tgctccatcg cttccgaaac ggtgaagatg gcgtttttag cattatattc atcaccggtc
    13561 accggtttac cgttcttaaa tagagagaac atcaggttct cgctgtccat cgccagcgat
    13621 tttgacagta aagaaaaacg ctccagacca agcaaaaata tcagactacg attgtgagtt
    13681 accggataga ggtaatagac gaaggtttta ccgtcaaaag agataaaccc tgtatttttg
    13741 acatgtcgat acttcacaac ctgcataata tctgcacaat aatttttctc gaactccttt
    13801 acctgaatac attcgtcact ggaaatcaga taaggaccga catcgtacaa ataagagggg
    13861 gaaaccgagt cggcgtaagc tgtgcgcaaa ccaaccaaca gctgttcctc cgtgggattt
    13921 agcgtgttga taagatcaat tgccacgcta cgccgatatt cagcaatatt tgccaccgca
    13981 aaagcagtat caataacgga ctgtttcagg ctatacaccc gttcctttac catttgagtg
    14041 tagatcccgc aggcaactgc tgaaatcatg ataaaaatca gcagactgac tgtaagtacg
    14101 aacttattga ttctggacat acgtaaacta ctcttttact aattttccac ttttatccca
    14161 ggcggagaat ggcataggtt tctggtacag atacccctga gcctgaacac atcctaattt
    14221 aattaattcg cgcgcaacgt cttcgctctc tacgccttcc gcaatcaccg ggatccggtt
    14281 atagcgtgcc agatcgaaaa taatgcgcac aatttttccc gcagtaccga aaatatcgcc
    14341 ggtaaattgc gagtccacct ttatgctgtc tggattaatt tcataaaaac gtttcaggtt
    14401 tgacaaaccg gtgccaaagt catcaatcga tatccgtacc ccttgtttac gcagttgttc
    14461 aatattgaga taaaaatgtt cattaattcg ctcgatcacg gtttcagtga tctcaacaca
    14521 gaggctgttc gccttcaggc cattttcttt catgatggtg gtaaaacgct catgaaagtg
    14581 cggttcgttt aactgccagg gcgaaacatt aatatgcagt aagaaatcat ccttcagcga
    14641 cgcacgctga ctaaaatgtc tgaattcacc cattgccgtt ttaataatct gataacccag
    14701 ctcattgata aaccc
//
LOCUS       DADMHC010000095        14533 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.095, whole genome shotgun sequence.
ACCESSION   DADMHC010000095 DADMHC010000000
VERSION     DADMHC010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14533
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.095"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            1..957
                     /gene="xylF"
                     /locus_tag="JNZ57_002384"
     CDS             1..957
                     /gene="xylF"
                     /locus_tag="JNZ57_002384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8828586.1"
                     /translation="MLLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVK
                     KAESLGAKVFVQSANGNGETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGI
                     KVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFR
                     AGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALTANNNKIDAVVASNDATAGGAIQAL
                     SAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPK
                     ADTSLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL"
     gene            1035..2576
                     /gene="xylG"
                     /locus_tag="JNZ57_002385"
     CDS             1035..2576
                     /gene="xylG"
                     /locus_tag="JNZ57_002385"
                     /EC_number="7.5.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter ATP-binding protein"
                     /protein_id="HAY8828587.1"
                     /translation="MPYLLEMKNITKTFGSVKAIDNVSLRLNAGEIVSLCGENGSGKS
                     TLMKVLCGIYPHGSYEGEIIFAGEEIQASHIRDTERKGIAIIHQELALVKELTVLENI
                     FLGNEITHNGIMDYDLMTLRCQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALNKQ
                     VRLLILDEPTASLTEQETSVLLDIIRDLQQHGIACIYISHKLNEVKAISDTICVIRDG
                     QHIGTRDAAGMSEDDIITMMVGRELTALYPNEPHTTGDEILRIEHLTAWHPVNRHIKR
                     VNDVSFSLKRGEILGIAGLVGAGRTETIQCLFGVWPGQWEGKIYIDGKQVDIRNCQQA
                     IAQGIAMVPEDRKRDGIVPVMAVGKNITLAALNKFTGGISQLDDAAEQKCILESIQQL
                     KVKTSSPDLAIGRLSGGNQQKAILARCLLLNPRILILDEPTRGIDIGVKYEIYKLINQ
                     LVQQGIAVIVISSELPEVLGLSDRVLVMHEGKLKANLINHNLTQEQVMEAALRSEHHV
                     EKQSV"
     gene            2554..3735
                     /gene="xylH"
                     /locus_tag="JNZ57_002386"
     CDS             2554..3735
                     /gene="xylH"
                     /locus_tag="JNZ57_002386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose ABC transporter permease XylH"
                     /protein_id="HAY8828588.1"
                     /translation="MSKSNPSEVKLAVPTSGGFSGLKSLNLQVFVMIAAIIAIMLFFT
                     WTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISAEIDLSVGSMMGLLGGVAAICD
                     VWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFRGILIGITNGT
                     TVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQSPASTAVV
                     GRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYAIGGNLE
                     AARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAACVIGG
                     TSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWMDSATKRR
                     S"
     gene            3813..4991
                     /locus_tag="JNZ57_002387"
     CDS             3813..4991
                     /locus_tag="JNZ57_002387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XylR family transcriptional regulator"
                     /protein_id="HAY8828589.1"
                     /translation="MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEED
                     FRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATD
                     NYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGL
                     ETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGI
                     DNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRS
                     TDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMI
                     HAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML
                     "
     gene            complement(5099..5923)
                     /locus_tag="JNZ57_002388"
     CDS             complement(5099..5923)
                     /locus_tag="JNZ57_002388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein bax"
                     /protein_id="HAY8828590.1"
                     /translation="MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKAS
                     NKQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAFLRTVMPYITSQNAAITAERNWL
                     ISKQYQGQWSPAERARLKDIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAA
                     ESGWGTSKLARNNNNLFGMKCMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPA
                     YSSFRKSRAQLRKADQEVTATAMIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM"
     gene            6243..8273
                     /gene="malS"
                     /locus_tag="JNZ57_002389"
     CDS             6243..8273
                     /gene="malS"
                     /locus_tag="JNZ57_002389"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HAY8828591.1"
                     /translation="MKLASCFLTLLPGFAVAASWTSPGFPVFSEQGTGTFVSHAQLPK
                     GTRPLTLNFDQQCWQPADAIKLNQMLSLQPYSNTPPQWRLFRDGKYTLQIDTRSGTPT
                     LMISIQNAAEAVANLVRECPKWDGLPLTLDVSATFPEGAAVRDYYSQQIAIVKNGQIT
                     LQPAATSNGLLLLERAETDTSAPFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMA
                     EIGTFHGGDLRALINKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYY
                     TQDWTNLDANMGNEADLRTLVDSAHQRGIRILFDVVMNHTGYATLADMQEYQFGALYL
                     SGDEVKKTLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRTDIGDYDNP
                     GFDDLTMSLAFLPDIKTESTTASGLPVFYKNKTDTHAKVIEGFTPRDYLTHWLSQWVR
                     DYGIDGFRVDTAKHVELPAWQQLKTEASSALREWKKTNPDKALDDKPFWMTGEAWGHG
                     VMQSDYYRHGFDAMINFDYQEQAAKAVDCLAQMDTTWQQMAEKLQGFNVLSYLSSHDT
                     RLFREGGDKAAELLLLAPGAVQIFYGDESSRPFGPTGSDPLQGTRSDMNWQDVSGKSA
                     ANVAHWQKISQFRARHPAIGAGKQTTLSLKQGYGFVREHGDDKVLVIWAGQQ"
     gene            8451..9704
                     /gene="avtA"
                     /locus_tag="JNZ57_002390"
     CDS             8451..9704
                     /gene="avtA"
                     /locus_tag="JNZ57_002390"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HAY8828592.1"
                     /translation="MTFSLFGDKFTRHSGITLLMEDLNDGLRTPGAIMLGGGNPAQIP
                     EMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLLAGMLREKLGWDIEPQNIAL
                     TNGSQSAFFYLFNLFAGRRADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELL
                     PEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVID
                     NAYGVPFPGIIFSEARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGI
                     ISLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQETIAIIRRYLPENRCLIHK
                     PEGAIFLWLWFKDLPITTEQLYQRLKARGVLMVPGHNFFPGLDKPWPHTHQCMRMNYV
                     PEPEKIEAGVKILAEEIERAWAESH"
     gene            complement(9855..10328)
                     /locus_tag="JNZ57_002391"
     CDS             complement(9855..10328)
                     /locus_tag="JNZ57_002391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HAY8828593.1"
                     /translation="MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRI
                     RVIKDHSWTTAVACHQCEDAPCANVCHVDAISREHGHIFIEQTRCIGCKSCMLACPFG
                     AMEVVSSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV"
     gene            complement(10430..11278)
                     /gene="yiaJ"
                     /locus_tag="JNZ57_002392"
     CDS             complement(10430..11278)
                     /gene="yiaJ"
                     /locus_tag="JNZ57_002392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator YiaJ"
                     /protein_id="HAY8828594.1"
                     /translation="MGKEVMGKKENEMAQEKERPAGSQSLFRGLMLIEILSNYPNGCP
                     LAHLSELAGLNKSTVHRLLQGLQSCGYVTTAPAAGSYRLTTKFIAVGQKALSSLNIIH
                     IAAPHLEALNIATGETINFSSREDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMG
                     KIYMAFGHPDYVKSYWENHQHEIQPLTRNTITELPAMFDELAHIRESGAAMDGEENEL
                     GVSCIAVPVFDIHGRVPYAVSISLSTSRLKQVGEKNLLKPLRETAQAISNELGFTVRD
                     DLGAIT"
     gene            11479..12468
                     /gene="yiaK"
                     /locus_tag="JNZ57_002393"
     CDS             11479..12468
                     /gene="yiaK"
                     /locus_tag="JNZ57_002393"
                     /EC_number="1.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydro-L-gulonate 2-dehydrogenase"
                     /protein_id="HAY8828595.1"
                     /translation="MKVTFEQLKAAFNRVLISRGVDSETADACAEMFARTTESGVYSH
                     GVNRFPRFIQQLENGDIIPDAQPKRITSLGAIEQWDAQRSIGNLTAKKMMDRAIELAA
                     DHGIGLVALRNANHWMRGGSYGWQAAEKGYIGICWTNSIAVMPPWGAKECRIGTNPLI
                     VAIPSTPITMVDMSMSMFSYGMLEVNRLAGRQLPVDGGFDDEGNLTKEPGVIEKNRRI
                     LPMGYWKGSGMSIVLDMIATLLSDGASVAEVTQDNSDEYGISQIFIAIEVDKLIDGPT
                     RDAKLQRIMDYVTTAERADENQAIRLPGHEFTTLLAENRRNGITVDDSVWAKI"
     gene            12489..12957
                     /locus_tag="JNZ57_002394"
                     /pseudo
     CDS             12489..12957
                     /locus_tag="JNZ57_002394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418033.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF386 domain-containing protein"
     gene            13075..13548
                     /gene="yiaM"
                     /locus_tag="JNZ57_002395"
     CDS             13075..13548
                     /gene="yiaM"
                     /locus_tag="JNZ57_002395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diketo-L-gulonate TRAP transporter small
                     permease YiaM"
                     /protein_id="HAY8828596.1"
                     /translation="MKKILEAILAINLAVLSCIVFINIILRYGFQTSILSVDELSRYL
                     FVWLTFIGAIVAFMDNAHVQVTFLVEKLSPAWQRRVALVTHSLILFICGALAWGATLK
                     TIQDWSDYSPILGLPIGLMYAACLPTSLVIAFFELRHLYQLITRSNSLTSPPQGA"
     gene            13551..>14533
                     /locus_tag="JNZ57_002396"
     CDS             13551..>14533
                     /locus_tag="JNZ57_002396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HAY8828597.1"
                     /translation="MAVLIFLGCLLGGIAIGLPIAWALLLCGAALMFWLDMFDVQIMA
                     QTLVNGADSFSLLAIPFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVLAAM
                     IMASLSGSAVADTAAVAALLVPMMRSANYPVNRAAGLIASGGIIAPIIPPSIPFIIFG
                     VSSGLSISKLFMAGIAPGMMMGATLMLTWWWQASRLNLPRQQKATMQEIWHSFVSGIW
                     ALFLSVIIIGGFRSGLFTPTEAGAVAAFYALFVATVIYREMAFATLWHVLIGAAKTTS
                     VVMFLVASAQVSAWLITIAELPMMVSDLLQPLVDSPRLLFIVIMVAILIVG"
BASE COUNT         3608 a         3602 c         3639 g         3684 t
ORIGIN      
        1 attctactca ccctttgcac ctcacttctg cttaccaacg ttgcggcaca cgccaaagaa
       61 gtcaaaatag gtatggcgat tgatgatcta cgtcttgaac gctggcaaaa agatcgagat
      121 atttttgtga aaaaggctga atctctcggt gcgaaagtat ttgtacagtc tgcaaatggc
      181 aatggagaaa cacaaatgtc gcagattgaa aacatgatta accggggtgt cgatgttctt
      241 gtcattattc cgtataacgg ccaggtatta agtaacgttg taaaagaagc caaacaagaa
      301 ggtattaaag tattagctta cgaccgtatg attaacgatg cggatatcga tttttatatt
      361 tctttcgata acgaaaaagt cggtgaactg caggcaaaag ccctggtcga tattgttccg
      421 caaggtaatt acttcctgat gggcggctcg ccggtagata acaacgccaa gctgttccgc
      481 gccggacaaa tgaaagtgtt aaaaccttac gttgattccg gaaaaattaa agtcgttggt
      541 gaccaatggg ttgatggctg gttaccggaa aacgcgctaa ccgccaataa taacaaaatt
      601 gatgctgtag ttgcctcaaa cgatgccacc gcaggtgggg caattcaggc attaagcgcg
      661 caaggtttat cagggaaagt agcaatttcc ggccaggatg cggatctcgc aggtattaaa
      721 cgtattgctg ccggtacgca aactatgacg gtgtataaac ctattacatt gctggcaaat
      781 actgccgcag aaattgccgt tgaattgggc aatggtcagg agccaaaagc agatacctca
      841 ctgaataatg gcctgaaaga tgtcccctcc cgcctcctga caccgatcga tgtgaataaa
      901 aacaacatca aagatacggt aattaaagac ggattccaca aagagagcga gctgtaagcg
      961 ttacgccccg gcgcggagcg ggggcgtgat ttctctccat gccgcgtgaa tgaattggct
     1021 taggtggagt cgttatgcct tatctacttg aaatgaagaa cattaccaaa accttcggca
     1081 gtgtgaaggc gattgataac gtcagcttgc ggttgaatgc tggcgaaatc gtctcactct
     1141 gtggggaaaa tgggtctggt aaatcaacgc tgatgaaagt gctgtgtggt atttatcccc
     1201 atggctccta cgaaggcgaa attatttttg cgggagaaga gattcaggcg agtcacatcc
     1261 gcgataccga acgcaaaggt atcgccatca ttcaccagga attggccctg gtgaaagaat
     1321 tgaccgtgct ggaaaatatc ttcctgggta acgaaataac ccacaatggc attatggatt
     1381 atgacctgat gacgctacgc tgtcagaagc tgctcgcaca ggtcagttta tccatttcac
     1441 ctgatacccg cgttggcgat ttagggcttg ggcaacaaca actggttgaa attgccaagg
     1501 cacttaataa acaggtgcgc ttgttaattc tcgatgaacc gacagcctca ttaactgagc
     1561 aggaaacgtc ggttttactg gatattattc gcgatctaca acagcacggt atcgcctgta
     1621 tttatatttc gcacaaactc aacgaagtca aagcgatttc cgatacgatt tgcgttattc
     1681 gcgacggtca gcacattggt acgcgtgatg ctgccggaat gagtgaagac gatattatca
     1741 ccatgatggt cgggcgagag ttaaccgcgc tttaccctaa tgaaccacat accaccggag
     1801 atgaaatatt acgtattgaa catctgacgg catggcatcc ggttaatcgt catattaaac
     1861 gagttaatga tgtctcgttt tccctgaaac gtggcgaaat actgggtatt gccggactcg
     1921 ttggtgccgg acgtaccgag accattcagt gcctgtttgg cgtgtggccc ggacaatggg
     1981 aaggaaaaat ttatattgat ggcaaacagg tagatattcg taactgtcag caagccatcg
     2041 cccaggggat tgcgatggta cccgaagaca gaaagcgcga cggcatcgtt ccggtaatgg
     2101 cggttggtaa aaatattacc ctcgccgcac tcaataaatt taccggtggc attagccagc
     2161 ttgatgacgc ggcagagcaa aaatgtattc tggaatcaat ccagcaactc aaagttaaaa
     2221 cgtcgtcccc cgatcttgct attggacgtt tgagcggcgg caatcagcaa aaagcgatcc
     2281 tcgcccgctg tctgttactc aacccgcgca ttctcattct tgatgaacct accaggggta
     2341 ttgatattgg cgtgaaatat gagatctaca aattaattaa ccaactcgtc cagcagggta
     2401 ttgccgttat tgtcatctct tccgaattac ctgaagtgct cggccttagc gatcgtgtac
     2461 tggtgatgca tgaagggaaa ctaaaagcca acctgataaa tcataacctg actcaggagc
     2521 aggtgatgga agccgcattg aggagcgaac atcatgtcga aaagcaatcc gtctgaagtg
     2581 aaattggccg taccgacatc cggtggcttt tccgggctga aatcactgaa tttgcaggtc
     2641 ttcgtgatga ttgcagctat catcgcaatc atgctgttct ttacctggac caccgatggt
     2701 gcctacttaa gcgcccgtaa cgtctccaac ctgttacgcc agaccgcgat taccggcatc
     2761 ctcgcggtag gaatggtgtt cgtcataatt tctgctgaaa tcgacctttc cgtcggctca
     2821 atgatggggc tattaggtgg cgtcgcggcg atttgtgacg tctggttagg ctggcctttg
     2881 ccacttacca tcattgtgac gttggttctg ggactgcttc tcggtgcgtg gaacggatgg
     2941 tgggtcgcgt accgtaaagt cccttcattt attgtcaccc tcgcgggcat gttggcattt
     3001 cgcggcatac tcattggcat caccaacggc acgactgtat cccccaccag cgccgcgatg
     3061 tcacaaattg ggcaaagcta tctccccgcc agtaccggct tcatcattgg cgcgcttggc
     3121 ttaatggctt ttgttggttg gcaatggcgc ggaagaatgc gccgtcaggc tttgggttta
     3181 cagtctccgg cctctaccgc agtagtcggt cgccaggctt taaccgctat catcgtatta
     3241 ggcgcaatct ggctgttgaa tgattaccgt ggcgttccca ctcctgttct gctgctgacg
     3301 ttgctgttac tcggcggaat gtttatggca acgcggacgg catttggacg acgcatttat
     3361 gccatcggcg gcaatctgga agcagcacgt ctctccggga ttaacgttga acgcaccaaa
     3421 cttgccgtgt tcgcgattaa cggattaatg gtagccatcg ccggattaat ccttagttct
     3481 cgacttggcg ctggttcacc ttctgcggga aatatcgccg aactggacgc tattgcagca
     3541 tgcgtgattg gcggcaccag cctggctggc ggtgtgggaa gcgttgccgg agcagtaatg
     3601 ggggcattta tcatggcttc actggataac ggcatgagta tgatggatgt accgaccttc
     3661 tggcagtata tcgttaaagg tgcgattctg ttgctggcag tatggatgga ctccgcaacc
     3721 aaacgccgtt cttgattttg ataaaaattt tctcaaagcc ggttacgtat taccggtttt
     3781 gagtttttgc atgattcagc aggaaaagaa ccatgtttac taaacgtcac cgcatcacat
     3841 tactgttcaa tgccaataaa gcctatgacc ggcaggtagt agaaggcgta ggggaatatt
     3901 tacaggcgtc acaatcagaa tgggatattt tcattgaaga agatttccgc gcccgcattg
     3961 ataaaatcaa ggactggtta ggagatggcg tcattgccga cttcgacgac aaacaaatcg
     4021 agcaagcgct ggctgatgtc gacgtcccca ttgttggggt tggcggctcg tatcaccttg
     4081 cagaaagtta cccacccgtt cattacattg ccaccgataa ctatgcgctg gttgaaagcg
     4141 catttttgca tttaaaagag aaaggcgtta accgctttgc tttttatggt cttccggaat
     4201 caagcggcaa acgttgggcc actgaacgcg aatatgcatt tcgtcagctt gtcgccgaag
     4261 aaaagtatcg cggagtggtt tatcaggggt tagaaaccgc gccagagaac tggcaacacg
     4321 cgcaaaatcg gctggcagac tggctacaaa cgctgccacc gcaaaccggg attattgccg
     4381 ttactgacgc ccgggcgcgg catattctgc aagtatgtga acatctacac attcccgtac
     4441 cggaaaaatt atgcgtgatt ggcatcgaca acgaagaact gacccgctat ctgtcgcgtg
     4501 tcgccctttc ttcggtcgct cagggcgcgc ggcaaatggg ctatcaggcg gcaaaactgt
     4561 tgcatcgatt attagataaa gaagaaatgc cgctacagcg aattttggtc ccacctgttc
     4621 gcgtcattga acggcgctca acagattatc gctcgctgac cgatcccgcc gttattcagg
     4681 ccatgcatta cattcgtaat cacgcctgta aagggattaa agtggatcag gtactggatg
     4741 cggtcgggat ctcgcgctcc aatcttgaga agcgttttaa agaagaggtg ggtgaaacca
     4801 tccatgccat gattcatgcc gagaagctgg agaaagcgcg cagtctgctg atttcaacca
     4861 ccttgtcgat caatgagata tcgcaaatgt gcggttatcc atcgctgcaa tatttctact
     4921 ctgtttttaa aaaagcatat gacacaacgc caaaagagta tcgcgatgta aatagcgagg
     4981 tcatgttgta gcgatgatga gaattgtcgg cgtcacatca gggaactcag cacagccacc
     5041 tgatgcgagc aaaagcctta tccgaccgac aaatcagata aggctcaagg aaatgcaatt
     5101 acatatgcgc cgcgattaac cgttggttat cctggtacat tgcgaacagg tagttattat
     5161 aactcttccc tttggtcgag tagcccttca gcttgtgaat catcgctgtg gcagtcactt
     5221 cctgatccgc tttacgcagc tgcgcacgcg atttacggaa cgaagagtaa gccgggtgcg
     5281 tattcaggtt agtgacatag gcgctcaccg attctttgac agaactaaac tgtgagtacc
     5341 ctttcacttt acccggcgca ttggtacaac gtcctttcat gcatttcatg ccgaacagat
     5401 tgttattgtt gcgcgccagc ttcgacgttc cccaaccgct ttctgctgca gccatcgtcg
     5461 ccaccatact ggtagggata atgtctacgc gttcaagcaa ggtattccac gggatttttc
     5521 gcgtattacc agaccacttc accttgtagc gtttggcgat gtctttcaga cgcgcacgct
     5581 cagcaggtga ccattggccc tgatactgtt ttgaaatcag ccagttacgt tctgcagtaa
     5641 tggctgcatt ttggctggta atgtaaggca ttacggtccg gagaaacgcc tttttccttg
     5701 gtgttccgga agggtatttt cgcaaatcag gaagtgaact actctttgca ctattgcgag
     5761 aatactcttg tttactgctt acctgtttat tactagcttt agttaagtgg gacttttgac
     5821 tcgctgttgt tgtgtgcgtc ttcgctaaca cctcactcga aaacaccaga gtgagtaaca
     5881 taagaatcat cgccccatat cgtcgtatgg gagtcaaaat catcaggtct cctggtcgga
     5941 tttaatcatt ccaacacctt atatttttca caaatttgag agttgaatct caaatcatat
     6001 caaaaatagc tgtcaagagc accccaagga atagtccaaa tctgaaacta tgtcacgagt
     6061 taacgattca gattggcgct aaatcgcaga aaatgtgggg tttatcgcaa aattcagccg
     6121 ttttttgcgc gcgatcgctc acccttgctt ctcatcctgt ggacttaccg ctcagggatg
     6181 agttttgtct ggcttatcgc tggcaaactg tctgaaatcg cagcaataag gactcatcca
     6241 ccatgaaact cgcctcctgt tttctgacac tccttcctgg cttcgccgtt gccgccagct
     6301 ggacttctcc ggggttccct gtctttagcg aacagggaac gggaacattt gtcagccacg
     6361 cgcagttgcc caaaggtacg cgtccactca cgctaaattt tgaccaacag tgctggcagc
     6421 ctgcagatgc gataaaactc aatcagatgc tttccctgca accttatagc aacacgccgc
     6481 ctcaatggcg attgttcagg gacggcaaat atacgctgca aatagacacc cgctccggta
     6541 cgccaacatt gatgatttcc atccagaacg ccgccgaagc ggtagcaaac ctggtccgtg
     6601 aatgcccgaa atgggatgga ttaccgctca cgctggatgt cagcgccact ttcccggaag
     6661 gagccgccgt acgggattat tacagccagc aaattgcgat agtgaagaac ggtcaaataa
     6721 cgttacaacc cgctgctacc agcaacggtt tactcctgct ggaacgggca gaaactgaca
     6781 catccgcccc tttcgactgg cataacgcca cggtttactt tgtgctgaca gatcgtttcg
     6841 aaaacggcga tcccagtaat gaccagagtt acggacgtca taaagacggt atggcggaaa
     6901 ttggcacttt tcacggcggc gatttacgcg ccctgatcaa taaactggat tacctccagc
     6961 agttgggcgt taatgcttta tggataagcg ccccatttga gcaaattcac ggctgggtcg
     7021 gcggcggtac aaaaggcgat ttcccgcatt atgcctacca cggttattac acacaggact
     7081 ggacgaatct tgatgccaat atgggcaacg aagccgatct acggacgctg gttgatagcg
     7141 cacatcagcg cggtattcgt attctctttg atgtcgtgat gaaccacacc ggctatgcca
     7201 cgctggcgga tatgcaggag tatcagtttg gcgcgttata tctttctggt gacgaagtga
     7261 aaaaaacgct gggtgaacgc tggagcgact ggaaacctgc cgccgggcaa acctggcata
     7321 gctttaacga ttacattaat ttcagcgaca aaacaggctg ggataaatgg tggggaaaaa
     7381 actggatcag aacggatatc ggcgattacg acaatcctgg attcgacgat ctcactatgt
     7441 cgctggcctt tttgccggat atcaaaaccg aatcaactac cgcttctggt ctgccggtgt
     7501 tctataaaaa caaaacggat actcacgcta aagtcatcga aggctttaca cctcgcgatt
     7561 acttaaccca ctggttaagt cagtgggtcc gcgactatgg gattgatggt tttcgggtcg
     7621 ataccgccaa acatgttgag ttgcccgcct ggcagcaact gaaaaccgaa gccagctccg
     7681 cgcttcgcga atggaaaaaa actaaccccg acaaagcatt agatgacaaa cctttctgga
     7741 tgaccggtga agcctggggc cacggcgtga tgcaaagtga ctactatcgc cacggcttcg
     7801 atgcgatgat caatttcgat tatcaggagc aggcggcgaa agcagtcgat tgtctggcgc
     7861 agatggatac gacctggcag caaatggcgg agaaattgca gggtttcaac gtgttgagct
     7921 acctctcgtc gcatgatacc cgtctgttcc gtgaaggggg cgacaaagca gcagagttat
     7981 tactattagc gccaggcgcg gtacaaatct tttatggcga tgaatcctcg cgtccgttcg
     8041 gtcctacagg ttctgatccg ctgcaaggta cacgttcgga tatgaactgg caggatgtta
     8101 gcggtaaatc tgccgccaac gtcgcgcact ggcagaaaat cagccagttc cgcgcccgcc
     8161 atcccgcaat tggcgcgggc aaacaaacga cactttcgct gaagcagggc tacggctttg
     8221 ttcgtgagca tggcgacgat aaagtgctgg tcatctgggc tgggcaacag tgacttttcc
     8281 ggcttcccgt tcatcagtac ctcgggaagc cgccaaccag gataaaatgt ctgccctaat
     8341 cagcgttgca ggataaagca ccgctcactc ttcaacagac cgatttgcac cccagcaaat
     8401 gtagcgttat tgttaccttc cttgctacag agttcgacag atatcccgct atgacattct
     8461 ccctttttgg tgacaaattt acccgccact ccggcattac gctgctgatg gaagatctga
     8521 acgacggttt acgcacgcct ggcgcgatta tgctcggcgg cggtaatccg gcgcagatcc
     8581 cggaaatgca ggactacttc cagacgctac tcaccgacat gctggaaagt ggcaaagcga
     8641 ctgatgcact gtgtaactac gacggtccac aggggaaaac ggagctactc acactgcttg
     8701 ccggaatgct gcgcgagaag ttgggttggg atatcgaacc acagaatatt gcactaacaa
     8761 acggcagcca gagcgcgttt ttctacttat ttaacctgtt tgccggacgc cgtgccgatg
     8821 gtcgggtcaa aaaagtgctg ttcccgctgg caccggaata cattggctac gctgacgccg
     8881 gactggaaga agatctgttt gtctctgcgc gtccgaatat tgaactgctg ccggaaggcc
     8941 agtttaaata ccacgtcgat tttgagcatc tgcatattgg cgaagaaacc gggatgattt
     9001 gcgtctcccg gccgacgaat ccaacaggca atgtgattac tgacgaagag ttgctgaagc
     9061 ttgacgcgct ggcgaatcaa cacggcattc cgctggtgat tgataacgct tatggcgtcc
     9121 cgttcccggg tatcatcttc agtgaagcgc gcccgctatg gaatccgaat atcgtgctgt
     9181 gcatgagtct ttccaagctg gggctgcctg gctcccgctg cggcattatc atcgccaatg
     9241 aaaaaatcat cactgccatc accaatatga acggcattat cagcctggca cctggcggta
     9301 ttggtccggc gatgatgtgt gaaatgatta agcgtaacga tctgctgcgc ctgtctgaaa
     9361 cagtcatcaa accgttttac taccagcgtg ttcaggaaac tatcgccatc attcgccgct
     9421 atttaccgga aaatcgctgc ctgattcata aaccggaagg agccattttc ctctggctat
     9481 ggtttaagga tttgcccatt acgaccgagc agctctatca gcgcctgaaa gcacgcggcg
     9541 tgctgatggt gccggggcac aacttcttcc cgggactgga taaaccgtgg ccgcatacgc
     9601 atcaatgtat gcgcatgaac tacgtaccag agccggagaa aattgaggcg ggggtgaaga
     9661 ttctggcgga agagatagaa agagcctggg cagaaagtca ctaaaaattg cctgatgcgc
     9721 tacgcttatc aggcctacat gatttctgca atatattgaa tttggaagaa tttgtaggcc
     9781 ggataaggcg tttacgccgc atctggcata aacaaaacgc actattccgg cgttgagaaa
     9841 cgccggaaaa cgtttcaaac aggctgctgc cgtagccgat gccgctgcac tttctcgaca
     9901 tccatgcact gcaacgcctt tgtcgggcag gcttcaacac aggccggccc cgtctcccga
     9961 tgccagcaca gatcgcactt aatcgccctc gcctttttgc gcgaagaaac gacctccatc
    10021 gcaccaaacg ggcaagccag catacagctt ttacagccaa tgcaacgtgt ttgttcaatg
    10081 aaaatatgcc catgttcgcg gcttatcgcg tcaacatggc agacattcgc gcacggtgca
    10141 tcttcacact gatgacaggc tactgccgtg gtccagctgt ggtctttaat gacacgaata
    10201 cgggaaataa actcgtctgg tgacaacgca gcgcaatcct gattctcctg atgcgacact
    10261 gcgcaagcca cttcacaggt acggcaaccg atacatttcg tcgcatccgc aataataaac
    10321 cggttcatga tcactccttt gcactaaaac agcagagtgc cagagagcgc gtccctactg
    10381 ctttgatcca acgaaggaaa tgttaaagtt ttggcacttg tccaaagcgt tatgtgatcg
    10441 cgcccaggtc atccctgaca gtaaatccca gttcattaga aatagcctgc gcggtttcac
    10501 gcagtggttt caggagattt ttctctccca cctgtttcag acgtgatgtc gaaagcgaaa
    10561 tcgacacggc gtacggcacc cgcccatgaa tatcaaacac cggaacagca atacaggaga
    10621 cgccgagttc gttttcttct ccgtccatcg ccgctccgct ttcacgaatg tgcgccagtt
    10681 cgtcgaacat cgcgggcagc tcggtaatgg tattgcgggt taacggctgg atctcatgct
    10741 gatggttttc ccagtatgac ttcacgtagt ccgggtgacc aaacgccatg tagatcttgc
    10801 ccattgcgga acagtagagc ggcatatgct ggccaatata ggcacgggtt cgcagcatcc
    10861 cggttgtggg ttccagctta taaatcaaaa tagcgtgatc gtcttcgcgg ctggagaagt
    10921 taatggtttc accagtggcg atgttcagtg cctcaagatg cggagcggcg atatgaatga
    10981 tattcagcga agacagcgcc ttctgcccga cggcaataaa tttggtagtc aggcggtaac
    11041 tccctgcggc gggcgcggtg gtcacatagc cgcaggactg taatccctgc aataagcgat
    11101 ggacggtact cttatttaaa ccagccagct ccgaaagatg cgccaacgga caaccgtttg
    11161 gatagttgct caaaatctca atcagcatca acccgcgaaa cagactctgg cttccggctg
    11221 gacgctcttt ttcctgcgcc atctcgttct ctttttttcc catcacttct ttccccattt
    11281 tgtcgcgtcc tgatggtagc gcaaagtgtg ccgtagttca cgatctcgac agataattta
    11341 taaccacttg atttttatgt cttttgaaat tcatcaatca gatttctttg ttaaaaagtg
    11401 atcaatatat ttgaaatcaa gtttcgcata ttgaaatttt aagccaaaaa agcgatcaaa
    11461 aaaacaagga agcctgggat gaaagtgaca tttgagcagt taaaagcagc ctttaatcgg
    11521 gtcttaattt cacgcggcgt tgacagcgaa acggctgacg cctgtgcaga gatgttcgcc
    11581 cgcaccaccg aatccggcgt ttattctcac ggcgttaatc gtttccctcg tttcattcaa
    11641 caactggaaa acggcgatat cattcctgat gcccaaccca aacgtataac cagcctcggc
    11701 gcaattgaac agtgggatgc ccagcgttcg atcggcaacc tgacggcgaa aaagatgatg
    11761 gatcgcgcca ttgaactggc tgccgatcac ggtattggtc tggtggcact tcgtaatgcc
    11821 aaccactgga tgcgcggcgg cagctacggc tggcaggcgg cggaaaaagg ctatattggc
    11881 atttgctgga ccaactccat cgccgtaatg ccgccgtggg gcgcaaaaga gtgtcgcatt
    11941 ggcactaacc cgctgatcgt cgccattcct tccacgccga tcaccatggt cgatatgtcg
    12001 atgtcgatgt tctcttacgg catgttagaa gttaaccgcc tggcgggccg tcagctcccg
    12061 gtcgatggtg gctttgatga tgagggcaat ttgaccaaag aacctggcgt tatcgagaag
    12121 aatcgccgca ttttgccgat gggctactgg aaaggttctg gcatgtcgat tgtgctggat
    12181 atgatcgcta ctctcctttc cgacggcgca tcggttgccg aagtcaccca ggacaacagc
    12241 gacgaatacg gcatttcaca aatttttatt gccattgaag tggacaagct tatcgacggt
    12301 cccacccgcg atgccaagct gcaacgcatc atggattacg ttactaccgc tgaacgcgct
    12361 gacgaaaacc aggccatccg cttacccggc cacgaattta ctaccctgct ggccgaaaac
    12421 cgccgtaacg gcatcactgt tgatgacagc gtgtgggcca aaatctaggc gttatgagga
    12481 gataagtcat gatttttgga catatcgcgc agcccaatcc gtgccgtttg cccgccgcca
    12541 ttgaaaaggc gctcgatttt ctgcgcgcta ccaacttcaa cgtcctggag ccgggcgttg
    12601 tcgaaatcga cggcaagaat atttatgcgc aaattatcga tttaaccaca cgcgaagcgg
    12661 tggaaaactg tccggaagtg catcgtcggt atatcgatat tcagtttctg gcgtggggtc
    12721 aagagaaaat cggcattgct attgatacag gaaataataa agtcagcgaa tcactattag
    12781 agcagcgcga tattattttt tatcatgtca gtgaacatga atcatttata gaaatgatac
    12841 cgggcagcta cgctattttc ttcccgcagg atgttcaccg accaggttgt attctgcaaa
    12901 caggcctctg agatacgaaa aattgtggtt aaagtcgcat taacagcgct gaattaatca
    12961 aataatcgtc tacgccagaa cgactgggta atgttattgc tctaactata ttaataattt
    13021 aggttgctgc acatgcaact tgaattatga cagacatagc ctcaaggaat agctatgaaa
    13081 aaaatacttg aagcaatact ggcgattaat ctcgccgtac tttcctgtat tgtgtttata
    13141 aacattattt taagatatgg ttttcagaca agcattttat ctgtagatga attgtcacgt
    13201 tatttatttg tctggttaac atttattggc gcgattgtgg cttttatgga taacgcccac
    13261 gttcaggtca cctttctggt ggagaaactc tcccccgcat ggcaacgacg agtcgctctg
    13321 gttacccatt ccttaatctt atttatttgt ggcgcactgg cctggggcgc aacgctaaaa
    13381 acaattcagg actggagcga ttattcaccg atcctcggtt tgcccatcgg cctgatgtat
    13441 gccgcttgtc tgcccaccag cctcgttatc gcattctttg aactgcgtca tttatatcaa
    13501 ctcatcacgc gtagcaattc tctaacgtcg ccaccgcaag gagcttaatc atggctgtgc
    13561 tgatttttct gggctgtctg ttgggtggta ttgctatcgg tttgcctatt gcctgggcac
    13621 tgttgttgtg cggggcggcg ttaatgttct ggctggacat gtttgatgtc cagatcatgg
    13681 cacaaacgct ggtgaacgga gccgatagct tctccctgct ggcgattccg ttctttgtgc
    13741 tggcgggtga aatcatgaat gcgggcggct tgtcaaaacg cattgttgac ctgccgatga
    13801 aactggtggg gcataaacca ggcgggctgg gctacgtcgg cgtgctggca gctatgatta
    13861 tggcgagcct ttctggttct gccgttgcgg ataccgccgc cgttgccgct ctactggtgc
    13921 cgatgatgcg cagcgccaac tacccggtca accgggcggc ggggctgatt gcctctggcg
    13981 gcattatcgc gccaattatt cccccttcca ttccgtttat tatcttcggc gtttccagcg
    14041 gattatccat cagtaagctg tttatggcgg gcattgcccc tggcatgatg atgggcgcaa
    14101 cgctgatgct tacctggtgg tggcaggcca gtcgccttaa tttaccccgc cagcaaaaag
    14161 caacgatgca ggaaatctgg cactcttttg tctccggtat ctgggctctg tttctttcag
    14221 tcatcattat tggcgggttt cgctccggtc tgtttacccc taccgaagcc ggggccgttg
    14281 ctgctttcta tgcgctgttt gtcgccacag ttatttaccg tgaaatggcc ttcgccacac
    14341 tttggcatgt actcattggc gcggcgaaaa ccacctcagt ggttatgttt ctggtggcct
    14401 cggcacaagt ttccgcctgg ctgattacca ttgctgaact gccgatgatg gtttctgatt
    14461 tactgcaacc gttggtcgat tcaccgcgtc tgctgtttat cgtcattatg gtggctatcc
    14521 tgattgtcgg cat
//
LOCUS       DADMHC010000096        14487 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.096, whole genome shotgun sequence.
ACCESSION   DADMHC010000096 DADMHC010000000
VERSION     DADMHC010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14487)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14487)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14487
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.096"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            99..419
                     /locus_tag="JNZ57_002397"
                     /pseudo
     CDS             99..419
                     /locus_tag="JNZ57_002397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244610.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            409..939
                     /locus_tag="JNZ57_002398"
     CDS             409..939
                     /locus_tag="JNZ57_002398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001409670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HipA family
                     toxin"
                     /protein_id="HAY8828598.1"
                     /translation="MKYESDGGPGIARIMAFLIGSSEALRDRYDFMKFQVFQWLIGAT
                     DGHAKNFSVFIQAGGSYRLTPFYDIISAFPVLGGTGIHISDLKLAMGLNASKGKKMAI
                     DKIYPRHFLATATVLRFPEVQMHEILSDFARMIPAALDNVKTSLPTDFPENVVTAVET
                     NVLRLHGRLSREYGSK"
     gene            1199..1291
                     /locus_tag="JNZ57_002399"
                     /pseudo
     CDS             1199..1291
                     /locus_tag="JNZ57_002399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004120448.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            1295..1474
                     /locus_tag="JNZ57_002400"
                     /pseudo
     CDS             1295..1474
                     /locus_tag="JNZ57_002400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310134.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimH domain protein"
     gene            1808..4087
                     /gene="ydeP"
                     /locus_tag="JNZ57_002401"
     CDS             1808..4087
                     /gene="ydeP"
                     /locus_tag="JNZ57_002401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance putative oxidoreductase YdeP"
                     /protein_id="HAY8828599.1"
                     /translation="MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKP
                     EGFDCPGCAWPDPKHSASFDICENGAKAIAWEVTDKQVNASFFAENTVQSLLTWGDHE
                     LEAAGRLTQPLKYDAVSDCYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAA
                     FLYQLFAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHN
                     PGTNHPRMLTSLRALVKRGAKMIAINPLQERGLERFTAPQNPFEMLTNSETQLASAYY
                     NVRIGGDMALLKGMMRLLIERDDAASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEW
                     KDIERISGLSQTQIAELADAYAAADRTIICYGMGITQHEHGTQNVQQLVNLLLMKGNI
                     GKPGAGICPLRGHSNVQGDRTVGITEKPSAEFLARLGERYGFTPPHAPGHAAIASMQA
                     ICTGQARALICMGGNFALAMPDREASAVPLTQLDLAVHVATKLNRSHLLTARHSYILP
                     VLGRSEIDMQKSGAQAVTVEDSMSMIHASRGVLKPAGVMLKSECAVVAGIAQAALPQS
                     VVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRHPGGFHLINAAAERRWMTPSGKANF
                     ITSKGLLEDPSSAFNSKLVMATVRSHDQYNTTIYGMDDRYRGVFGQRDVVFMSAKQAK
                     ICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMADRSLVTYFPESNHMLTLDNHD
                     PLSGIPGYKSIPVELEPSN"
     gene            4335..4532
                     /gene="safA"
                     /locus_tag="JNZ57_002402"
     CDS             4335..4532
                     /gene="safA"
                     /locus_tag="JNZ57_002402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system connector SafA"
                     /protein_id="HAY8828600.1"
                     /translation="MHATTVKNKITQRDNYKEIMSVIVVVLLLTLTLIAIFSAIDQLG
                     ISEMGRIARDLTHFIINSLQD"
     gene            4607..5368
                     /gene="ydeO"
                     /locus_tag="JNZ57_002403"
     CDS             4607..5368
                     /gene="ydeO"
                     /locus_tag="JNZ57_002403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid stress response transcriptional regulator
                     YdeO"
                     /protein_id="HAY8828601.1"
                     /translation="MSLVCSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPY
                     ERHFKEIGFTENTIKKYLQCTNIQTVTVPVPAKFLRASNVPTGLLNEMIAYLNSEERN
                     HHNFSELLLFSCLSIFAACKGFITLLTNGVLSVSGKVRNIVNMKLAHPWKLKDICDCL
                     YISESLLKKKLKQEQTTFSQILLDARMQHAKNLIRVEGSVNKIAEQCGYASTSYFIYA
                     FRKHFGNSPKRVSKEYRCQSHTGMNTGNTMSALAI"
     gene            5406..6017
                     /locus_tag="JNZ57_002404"
     CDS             5406..6017
                     /locus_tag="JNZ57_002404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016245973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPASM domain-containing protein"
                     /protein_id="HAY8828602.1"
                     /translation="MQFIELLETGTPNIDFSGHSENTFRIIDFSVPPTAYGKFMSTIF
                     MQWVKNDVGEIFIRQFESFVSRFLGNGHTSCIFQESCKDNLVVESNGDIYECDHFVYP
                     QYKIGNINKSELKTMNSVQLTAQKKRISAKCQQCAYKPICNGGCPKHRITKVNNETVS
                     YFCEGYKILFSTMVPYMNAMVELAKNRVPLYHIMDVAKQMENN"
     gene            complement(5983..6105)
                     /locus_tag="JNZ57_002405"
     CDS             complement(5983..6105)
                     /locus_tag="JNZ57_002405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828603.1"
                     /translation="MTKHPTGIYVGCLVKVIRRRLRMELKESVINYSPFVLQHP"
     gene            6308..7993
                     /locus_tag="JNZ57_002406"
     CDS             6308..7993
                     /locus_tag="JNZ57_002406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HAY8828604.1"
                     /translation="MITIPITFCMLIAKYLCLLKPFWLRKNNKTSVLLIIIILAMILG
                     VVKIQVWLNDWNNDFFNALSQKETDKLWQLVLWFPALLGIFVLISANKTWLIKLLTIR
                     WREWLTDYYLNRWFADKNYYFTQIYGEHKNTDNPDQRIAEDILLLISKTLSLSFGFIQ
                     SLSMLITFTVILWQSAGTLSFTVGGTEWNIQGYMVYTVVLIVIGGTLFTHKVGKRIRP
                     LNVEKQRSEATFRTNLVQHNKQAELIALSNAESLQRQELRDNFHTIKENWHRLMNRQR
                     WLDYWQNIYSRSLSVLPYFLLLPQFISGQINLGGLMKSRQAFMLVSNNLSWFIYKYDE
                     LAELAAVIDRLYEFHQLTEQRPTNKPKNCQHAVQVANASIRTPDNKIILENLNFHVSP
                     GKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDIFSPADSWYVSQTPLIKTGLLKEIICK
                     ALPLPVDDKSLSEVLHQVGLGKLAARIHDHDRWGDILSSGEKQRIALARLILRRPKWI
                     FLDETTSHLEEQEAIRLLRLVREKLSTSGVIMVTHQPGVWNLADDICDISAVL"
     gene            8031..10403
                     /locus_tag="JNZ57_002407"
     CDS             8031..10403
                     /locus_tag="JNZ57_002407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HAY8828605.1"
                     /translation="MKRVLIPGVILCGADVAQAVDDKNMYMHFFEEMTVYAPVPVPVN
                     GNTHYTSESIERLPTGNGNISDLLRTNPAVRMDSTQSTSLNQGDIRPEKISIHGASPY
                     QNAYLIDGISATNNLNPANESDASSATNISGMSQGYYLDVSLLDNVTLYDSFVPVEFG
                     RFNGGVIDAKIKRFNADDSKVKLGYRTTRSDWLTSHIDENNKSAFNQGSSGSTYFSPD
                     FKKNFYTLSFNQELADNFGVTAGLSRRQSDITRADYVSNDGIVAGRAQYKNVIDTALS
                     KFTWFASDRFTHDLTLKYTGSSRDYNTSTFPQSDREMGNKSYGLAWDMDTQLAWAKLR
                     TTVGWDHISDYTRHDHDIWYTELSCTYGDITGRCTRGGLGHISQAVDNYTFKTRLDWQ
                     KFAVGDVSHQPYSGAEYIYSDAWTERHNQSESYVINAAGKKTNHTIYHKGKGSLGIDN
                     YTLYMADHISWRNVSLMPGVRYDYDNYLSNHNISPRFMTEWDIFADQTSMITAGYNRY
                     YGGNILDMGLRDIRNSWTESVSGNKTLTRYQNLKTPYNDELAMGLQQKIGKNVIARAN
                     YVYRAAHDQISKSSRTDSATKTTITEYNNDGKTKTHSFNLSFELAEPLHIRQVDINPQ
                     IVFSYIKSKGNLSLNNGYEESNTGDNQVVYNGNLVSYDSVPVADFNNPLKISLNMDFT
                     HQPSGLVWANTLAWQEARKARIILGKTNAQYISEYSDYKQYVDEKLDSSLTWDTRLSW
                     TPQFLKQQNLTISADILNVLDSKTAVDTTNTGVATYASGRTFWLDVSMKF"
     gene            10448..13243
                     /locus_tag="JNZ57_002408"
     CDS             10448..13243
                     /locus_tag="JNZ57_002408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HAY8828606.1"
                     /translation="MEIIMRNLCFLLTLVATLLLPGRLIAAALPQDEKLITGQLDNGL
                     RYMIYPHAQPKDQVNLWLQIHTGSLQEEDNERGVAHFVEHMMFNGTKTWPGNKVIETF
                     ESMGLRFGRDVNAYTSYDETVYQVSLPTTQKQNLQQVMAIFSEWSNAATFEKLEVDAE
                     RGVITEEWRAHQDAKWRTSQARRPFLLANTRNLDREPIGLMDTVATVTPAQLRQFYQR
                     WYQPNNMTFIVVGDIDSKEALALIKDNLSKLPANKAAENRVWPTKAENHLRFNIINDK
                     ENRVNGIALYYRLPMVQVNDEQSFIEQAEWSMLVQLFSQRLQERIQSGELKTISGGTA
                     RSVKIAPDYQSLFFRVNARDDNMQDAANALMSELATIDQHGFSAEELDDVKSTRLTWL
                     KNAVDQQAERDLRMLTSRLASSSLNNTPFLSPEETYQLSKRLWQQITVQSLAEKWQQL
                     RKNQDAFWEQMVNNELAAKKALSPAAILALEKEYANKKLAAYIFPGRNLSLTVDADPQ
                     AEISSKETLAENLTSLTLSNGARVILAKSAGEEQKLQITAVSNKGDLSFPAQQKSLIA
                     LANKAVSGSGVGELSSSSLKRWSAENSVTMSSKVSGMNTLLSVSARTNNPEPGFQLIN
                     QRITHSTINDNIWASLQNAQIQALKTLDQRPAEKFAQQMYETRYADDRTKLLQENQIV
                     QFTAADALAADRQLFSSPADITFVIVGNVSEDKLVALITRYLGSIKHSDSPLAAGKPL
                     TRATDNASVTVKEQNEPVAQVSQWKRYDSRTPVNLATRMALDAFNVALAKDLRVNIRE
                     QASGAYSVSSRLSVDPQAKDISHLLAFTCQPERHDELLTLANEVMVKRLAKGISEQEL
                     NEYQQNVQRSLDIQQRSVQQLANTIVNSLIQYDDPAAWTEQEQLLKQMTVENVNTAVK
                     QYLSHPVNTYTGVLLPK"
     gene            13605..>14487
                     /locus_tag="JNZ57_002409"
     CDS             13605..>14487
                     /locus_tag="JNZ57_002409"
                     /EC_number="4.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HAY8828607.1"
                     /translation="MDKKQVTDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQ
                     IINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVN
                     MVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCG
                     PVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYE
                     FPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHK
                     FGLAPLGCGWVIWRDEEA"
BASE COUNT         4127 a         3186 c         3324 g         3850 t
ORIGIN      
        1 agcgaaaagc tcctgactca aacgtgactg gcgaactgcg caatagcata agcgggaagg
       61 gtatcgtgag cgcaaccgcc aggacagatg tagagctgga tggcgataat agccgctttg
      121 gggtgaaaac ctacctgaac agccatcacc agcgtgacga tggtaaacag cgtgagttcc
      181 agccttacat tgaagcgaat tggatcaaca acagcaaagt ctacgccgtg aagatgaatg
      241 gtcaaaccgt aggccgtgaa ggtgcgcgta atctcggtga agtacgtacc ggggttgagg
      301 cgaaagtaaa taacaacctt agcctgtggg ggaatgtcgg tgtgcaacta ggtgataaag
      361 gctatagcga tactcagggc atgctgggag tgaaatttac cttcatctgt gaaatatgaa
      421 tcagatggag gcccaggcat cgcgcggatc atggcgtttt tgatagggtc cagcgaggcg
      481 cttcgcgatc gttatgattt tatgaaattc caggtcttcc agtggttgat tggcgcaacg
      541 gatggccatg caaaaaactt ctccgtattt attcaggctg gcggcagtta tcgactcacg
      601 ccattttacg acatcatttc agcatttccg gtccttggcg gtacgggaat acacatcagc
      661 gatctcaaac tggcaatggg gcttaacgca tccaaaggca aaaaaatggc aatcgataaa
      721 atttatccgc gacatttttt ggcgacagca acggtgctga gattcccgga agtgcagatg
      781 catgaaatcc taagtgactt tgccagaatg attccggcag cactggataa cgtgaagact
      841 tcattaccga cagattttcc ggagaacgtg gtgacggcag ttgaaaccaa tgtgttgagg
      901 ttgcatggac ggttaagccg agaatacggt agtaagtgag atatggggtt tggtcattgt
      961 taatgagcaa ccatgaccgc caacgactgg attctccctt ggtttatgtt ggtgcgcata
     1021 atgtatatta tgttaaatca tatctgagtg atgcgaagtg cttttctggt agtcgttatt
     1081 cgttcagggt tccagaactt aagcctctcc tctttcataa ttggcctgtg catgacggat
     1141 ataggctggc tggtatgcag atttgccgtt tgccgcatct tcccagcgtt gaagactcaa
     1201 gctggcaaac cgcgtgcaaa tgagcacgcc ctctttccat caacacttca ggcagcttgc
     1261 gggaatgagt ccactacggt atcagaaatg ggaagtgggt gtctctctga tgcgtaatgg
     1321 aaaaatactg gctacgggag aaaatgtctc cctggggaca gtaaataaaa gcaaagtatc
     1381 tctgggttta agcgcaacct atggacaaac aggaaacaag gttgcagccg gaaccgtcca
     1441 gtcagtcatt ggtgtcactt ttatctatga ataattgtga ttttgatctt agtctatgcg
     1501 ctccattcac gaaaattgcg cggataatta ttttgtgaag gctattatcc tacacctgta
     1561 agaaaatccg cgcacaattg aagccagagt cttatttttt atattgaaaa atatgttaat
     1621 ttaaacacta tgagagatga tgcttaactt atcgtattta atctattgtt taacgataat
     1681 agattaaaaa tagaaagaga gtagtcccct actcttatat atccatgttg gcgataatcc
     1741 ctttgtatgt actgtgcatc atcgctatta caaatcctaa taattcattt ccacacagga
     1801 taagtagatg aagaaaaaaa ttgaatccta ccagggtgct gcaggtggtt ggggtgctgt
     1861 taaatccgta gcgaatgcag tacgtaagca gatggatata cgccaggatg ttattgccat
     1921 gtttgacatg aataagccag agggctttga ctgtccgggt tgtgcatggc cagatcctaa
     1981 gcacagtgcg tcattcgaca tttgtgaaaa cggcgcaaaa gcaatcgcct gggaagtcac
     2041 ggataagcag gtaaatgcct ctttctttgc tgagaatacg gttcaatcat tacttacctg
     2101 gggagatcac gagcttgagg ctgcgggacg tctcactcag cctttgaaat atgatgccgt
     2161 cagcgactgt tacaagccat taagctggca acaagctttc gacgaaattg gcgcacgcct
     2221 tcaaagctat agtgatccca atcaggttga attctatact tcgggccgca cttccaatga
     2281 agctgccttt ctttatcagc tttttgcccg tgaatacggg agcaataact ttcccgactg
     2341 ctccaacatg tgccatgaac cgaccagtgt gggtttggca gcgagtatcg gcgtgggtaa
     2401 agggactgtg ttgctggaag actttgagaa gtgcgattta gtcatttgca ttgggcataa
     2461 ccctggtaca aaccaccccc gcatgctgac ttcgttgcgc gctttagtga aacggggagc
     2521 gaaaatgatc gccatcaatc ctctacagga acgtggcctg gagcgattta ccgcaccgca
     2581 aaacccgttt gaaatgctga cgaactctga gactcagttg gccagtgcgt actacaacgt
     2641 gcgcattggt ggcgatatgg cgttgctcaa ggggatgatg cgcctgttaa ttgagcgcga
     2701 tgatgctgca agtgccgcag gtcggccctc attgcttgat gacgaattta ttcaaacgca
     2761 taccgtcggc tttgacgagc tacgccgtga cgttctcaat tccgagtgga aagatatcga
     2821 acgtatttct ggactaagtc agacacaaat cgccgaactg gctgacgcat atgccgctgc
     2881 cgatcgcacc attatctgtt acggaatggg gatcactcag cacgaacatg gtacccagaa
     2941 tgtacagcaa ctggtcaatc tgttgttgat gaaaggtaac attggcaagc ctggtgcggg
     3001 tatctgccca ctacgaggtc actctaatgt acagggcgac cgaaccgtcg gtatcaccga
     3061 gaaaccgtct gcagagtttc tggctcgcct gggtgagcgc tatggcttca ccccacctca
     3121 tgcacctgga catgctgcaa ttgccagcat gcaagcaata tgcacggggc aggctcgagc
     3181 attgatctgc atggggggca actttgcact ggcaatgcca gatcgggaag cgagcgctgt
     3241 accgttaacg caattagatt tggcggtaca cgtagccact aagcttaacc gctctcatct
     3301 gctgaccgca cggcatagct atattctgcc ggttctgggg cgtagcgaga ttgacatgca
     3361 aaaaagcggt gcgcaggcgg taaccgttga ggattcaatg tcgatgattc atgcctcgcg
     3421 tggcgtgtta aaacccgccg gtgtaatgct gaaatcagag tgtgcagtgg tcgcgggaat
     3481 cgcgcaggca gcactacccc agagcgtggt agcctgggag tatctggtgg aagattatga
     3541 tcgcattcgc aatgacattg aagctgtgtt accagagttc gccgactata accagcgcat
     3601 ccgacatcct ggaggttttc acctgataaa tgcagctgct gaaaggcgct ggatgacgcc
     3661 gtcaggtaag gctaatttca ttaccagcaa agggctgtta gaagatccct cttcagcgtt
     3721 taacagtaag ctggtcatgg cgacagtacg cagccacgat cagtacaaca cgacgattta
     3781 tggtatggat gatcgctatc gaggggtatt cggtcaacga gatgtggtct ttatgagtgc
     3841 taaacaagct aaaatttgcc gtgtaaaaaa cggcgaaaga gttaatctta ttgcgcttac
     3901 gccagacggt aagcgcagct cacgccgcat ggatagatta aaagtggtca tttaccctat
     3961 ggctgaccgc tcactggtga cctattttcc agaatcgaat cacatgctaa ctcttgataa
     4021 ccacgatcca ttaagtggca ttcctggtta taaaagtatt ccggttgaat tagaaccatc
     4081 aaattaattc gcctcctcat ttcttctgct gtcatccgca cagcagaaga atttctcatt
     4141 gactattatc gcgcaatttg ctcacattga tcaaattaaa ccacacacta taagatataa
     4201 acctctgcct acagctgtaa gaaactccgc tcagtactga agtgccagtc ctatttcctc
     4261 ttttctccag cctgttatat taagcatact gattaacgat ttttaacgtt atccgctaaa
     4321 taaacatatt tgaaatgcat gcgaccacag tgaaaaacaa aatcacgcaa agagacaact
     4381 ataaagaaat catgtctgta attgtggttg tcttattact gacccttacg ttgatagcca
     4441 ttttttcggc aattgatcag ctgggtattt cagaaatggg tcgcattgca agagatctta
     4501 cacatttcat tatcaatagt ttgcaagact gaaaataaac agcaaattat aaatatgaaa
     4561 tgttaaaaaa gtatcgataa aaactttatt gttttaagga gataaaatgt cgctcgtttg
     4621 ttctgttata tttattcatc atgccttcaa cgctaacatt ttagataaag attacgcctt
     4681 ctctgacggc gagatcctga tggtagataa cgctgttcgt acgcattttg aaccttatga
     4741 gcggcatttt aaagagatcg gatttactga aaataccatt aaaaaatatc tacaatgcac
     4801 taacatccag acagtgacgg tgcctgttcc tgcgaagttt ttacgtgctt caaatgtacc
     4861 gactggattg cttaatgaaa tgattgctta tctcaactcg gaagaacgca atcatcataa
     4921 tttttcagaa cttttgcttt tttcttgcct gtctattttt gccgcatgca aaggtttcat
     4981 tacactatta actaacggtg tgctatccgt ttccggaaaa gtgagaaata ttgtcaacat
     5041 gaagctggcg cacccatgga agctgaaaga tatttgtgac tgcctgtaca tcagtgaaag
     5101 cctgttgaag aaaaaactaa agcaagagca aacgacattc tcacagattc tattagatgc
     5161 cagaatgcag cacgcaaaaa atttgatacg cgtagaaggt tcagtcaata aaattgccga
     5221 acaatgtggt tatgccagta cttcttattt tatttatgcg ttccgcaaac atttcggcaa
     5281 cagtccgaag agagtttcta aggagtaccg ttgtcaaagt cacacgggta tgaatacggg
     5341 caacacgatg agtgctttag ctatttgatt atttgctaac tttaaaatct atcggcagta
     5401 aacatatgca atttatcgaa ttgctcgaaa ccgggacgcc gaatattgat ttcagtggtc
     5461 atagtgagaa cacattccgt atcattgatt tttctgtgcc tcccacggct tatggcaagt
     5521 ttatgtcaac catttttatg caatgggtta aaaacgatgt gggtgaaatt ttcattcgtc
     5581 agtttgaaag ctttgtcagc cgttttttgg ggaatgggca tacaagttgt attttccagg
     5641 agtcctgcaa ggataatctg gttgttgaaa gtaatggaga catttacgaa tgcgaccatt
     5701 ttgtctatcc acagtacaaa attggaaaca ttaataaatc tgaactcaaa acgatgaaca
     5761 gtgtacaact gacagcgcaa aaaaaacgga tttcagcgaa atgtcagcaa tgtgcatata
     5821 aacctatctg caatggcggt tgtcctaagc atcgtattac taaagtaaac aatgagactg
     5881 tttcttattt ttgcgaaggt tataaaatcc ttttttcaac catggtacct tatatgaacg
     5941 ccatggttga gttagctaag aacagagtac cgctttacca cattatggat gttgcaaaac
     6001 aaatggagaa taattaataa cgctctcttt taactccatt cttagcctcc ttcttatgac
     6061 cttaacaagg cacccgacat aaattcctgt cgggtgtttc gtcatcatca tcttcccttg
     6121 cgaaaatcct ggcttacgtg gtatgcgtca gggcattagc aatacccttg attatcaata
     6181 gcataaccat aaccactgaa aattaaaaat ttctatatat ttcatattgt taaatgatac
     6241 ttaaataaat ttcatcagta aatcattgcc atagataatc attggatggc acaatcaatt
     6301 ttcgctaatg ataaccattc ccattacgtt ttgtatgttg atagcaaagt atctctgtct
     6361 gctgaagccc ttttggctgc gtaagaataa taaaacttca gtgttgttaa tcattattat
     6421 cctcgcaatg atccttggcg tggttaaaat tcaggtctgg ttaaacgact ggaataatga
     6481 ttttttcaat gcgctaagcc agaaagaaac cgataagctt tggcagcttg ttctttggtt
     6541 ccctgccctg ctggggatct ttgtattaat atccgcaaac aaaacatggt taattaaact
     6601 actgactatt cgctggcgcg aatggttaac agattactac cttaatcgct ggtttgcaga
     6661 taaaaactac tacttcacgc agatctacgg cgagcataaa aatacagata accctgacca
     6721 acgtatcgct gaagacattc tcttactgat cagcaaaacg ctcagtcttt catttggctt
     6781 catccagtca cttagcatgc tgatcacctt taccgttatt ctttggcaaa gcgcgggtac
     6841 gctctcattc actgttggtg gaacagaatg gaatatccag gggtatatgg tctataccgt
     6901 cgtgctcatt gtgatcggtg gaactttatt tacccataag gttggtaagc gtattcgtcc
     6961 gcttaatgtg gaaaaacaac gtagcgaagc gacatttcga actaatcttg tgcagcataa
     7021 taagcaggca gaactgattg ctctaagcaa tgctgagtct ctacaacgcc aggagttgcg
     7081 cgacaatttt cataccatta aagagaactg gcatcgttta atgaatcgtc agcggtggct
     7141 tgattactgg caaaatattt attcgcgctc gcttagcgtt cttccctact ttctgttatt
     7201 gccgcagttt attagcgggc agatcaatct gggcggactg atgaaatcgc gccaggcatt
     7261 tatgctagta tcgaacaatt taagctggtt tatttataaa tatgacgaac ttgctgaact
     7321 ggctgcggtt atcgatcgct tgtatgagtt ccatcaactc actgaacagc gccctacgaa
     7381 taagcctaaa aattgccaac atgcggtaca agtggctaat gcgagtattc gtacgcctga
     7441 taataagatc atattagaga acttgaactt tcatgtttcg ccaggcaaat ggctattact
     7501 gaaaggctac tctggtgcgg gaaaaaccac actgcttaaa acattatccc actgctggcc
     7561 gtggtttaaa ggtgatattt tttctcctgc tgacagttgg tatgtgtcac aaacaccgtt
     7621 aatcaaaacc ggcttactga aagagattat ttgtaaagca cttcccctgc ccgtagacga
     7681 taaatcgttg agcgaagtac tgcatcaggt tggtcttggg aaattggctg cgcgtattca
     7741 tgaccacgat cgctggggag atattctttc cagcggcgaa aaacaacgta tcgccctggc
     7801 acgattaatt ttacgacgtc cgaaatggat atttcttgac gaaactacct ctcatcttga
     7861 ggaacaagag gctatccgct tactgcgttt agtgcgtgaa aaactatcca caagcggcgt
     7921 cattatggtt acacatcaac ccggtgtctg gaacctggcc gatgatattt gtgacattag
     7981 cgcggtttta taaaaacaat aaaagccctg ctgtacggag atataaataa atgaagcgag
     8041 ttcttattcc tggcgtcatt ttatgtggcg ctgatgtggc gcaggccgtc gatgacaaaa
     8101 acatgtacat gcattttttt gaagagatga cggtctatgc tcctgtccct gtacccgtaa
     8161 acggcaacac gcattacacc agtgaaagca tcgagcgttt accgaccggg aatggcaata
     8221 tcagcgatct gctgagaacc aaccctgcgg tacgcatgga ttcaacgcaa agtacctcgt
     8281 tgaaccaggg agatattcgc cctgagaaaa tctctattca cggtgcgtcg ccctaccaga
     8341 atgcctattt gattgacggt attagtgcaa ctaataacct gaacccagcg aatgagtccg
     8401 atgccagtag tgcaaccaat attagcggga tgtcacaggg gtattatctt gatgtcagct
     8461 tactggacaa tgtgacgctt tatgacagtt ttgtgccggt tgaatttggt cgcttcaatg
     8521 gcggggtaat tgatgcaaag atcaaacgct tcaacgctga tgatagcaag gtgaaattgg
     8581 gttatcgcac tacgcgttcg gactggttaa catcgcatat cgatgagaat aacaagagcg
     8641 catttaatca aggttcttca ggaagtactt atttctctcc agattttaaa aagaactttt
     8701 ataccttgtc gtttaatcag gagctggctg ataactttgg cgttaccgcc ggtttatcgc
     8761 gccgccagtc tgatatcacc cgcgcggatt atgtttcgaa tgacggcatt gtcgccggtc
     8821 gggcacagta taaaaacgtt atcgatactg cattgagcaa atttacctgg tttgccagcg
     8881 accgctttac ccacgattta accttaaaat ataccggctc cagccgtgat tataatacca
     8941 gcaccttccc gcagtctgat cgcgaaatgg gtaataaatc ctatggtctt gcatgggata
     9001 tggatacgca actcgcatgg gccaaactac gtaccaccgt tggttgggat catattagtg
     9061 attatacccg tcacgatcat gacatctggt acaccgaact ttcatgtaca tatggtgata
     9121 ttacagggcg ttgtacccgt ggcggattag gacacatttc ccaggctgta gataattaca
     9181 ccttcaaaac acgcctggac tggcaaaaat tcgccgtggg tgatgtttcg catcaaccct
     9241 actccggcgc ggaatacatc tattccgatg catggactga acgccataac cagtctgaat
     9301 cctatgtgat taatgctgca ggaaagaaaa ctaaccatac catttaccat aaaggtaaag
     9361 gcagcctagg aattgacaac tacacgctgt atatggcgga tcacattagc tggcggaatg
     9421 tgtcgttaat gcccggtgtg cgttatgact atgacaacta tctgtcaaac cacaatatct
     9481 ccccgcgctt tatgacggaa tgggatattt ttgctgatca aacctcaatg attaccgccg
     9541 gttataaccg ttactatggc gggaatattc ttgatatggg attacgtgat atccgcaata
     9601 gctggacgga atcggtatca ggtaataaaa ccctgacgcg ttatcagaat ttgaaaacgc
     9661 cttataacga tgaactggca atgggattgc agcaaaaaat cggtaagaac gttattgcac
     9721 gcgcaaacta tgtttaccgt gcagcgcatg atcaaatcag caaaagcagt cgtaccgaca
     9781 gcgcgactaa aaccaccatt actgaatata acaacgatgg caaaaccaaa acgcattcgt
     9841 ttaacctcag ttttgaactg gccgaacccc tgcatatccg ccaggtagat attaacccgc
     9901 aaattgtctt tagctatatc aagagcaagg gcaacttgtc gttaaacaat ggttatgagg
     9961 agagcaatac cggtgataac caggtggttt ataacggtaa tctggtctct tacgatagcg
    10021 ttccagtggc agattttaat aacccattaa agatctcctt aaacatggat ttcacgcatc
    10081 aaccgagcgg gttagtgtgg gcgaatacgc tggcctggca agaagcgcgt aaagctcgca
    10141 ttatccttgg taagacaaat gcgcaataca tcagcgaata ttcagattac aagcagtatg
    10201 ttgacgaaaa actggatagc agcctgacct gggacacccg cttgtcctgg acgccacaat
    10261 ttctgaaaca acaaaacctg acgatcagtg ccgatattct caatgtactg gatagcaaaa
    10321 ccgctgttga tacaacgaat accggtgtgg cgacctacgc cagtggccgt actttctggc
    10381 ttgatgtcag catgaaattt taatagttcg gattttactt aaccggataa attcgcccgg
    10441 ttttcgcatg gagataatta tgagaaacct ctgtttctta ctgacgttag tggcaactct
    10501 gttgctcccc gggcggctga ttgccgccgc cttaccgcag gatgaaaagt taattaccgg
    10561 gcaactggac aatggcttgc gatatatgat ttatccgcat gctcaaccaa aggatcaggt
    10621 aaatttatgg ctgcaaattc ataccggttc attgcaggaa gaagacaatg agcgcggcgt
    10681 ggctcatttt gtagaacata tgatgtttaa cggcacaaaa acatggccgg gtaataaagt
    10741 catcgaaaca tttgagtcaa tgggcctgcg ttttggtcgc gatgttaatg cctataccag
    10801 ctatgacgaa acggtgtatc aggtgagttt gccgactacg cagaaacaaa atctgcaaca
    10861 agtgatggca atcttcagtg aatggagtaa tgccgcaacc tttgaaaaac tcgaagtaga
    10921 cgctgaacgt ggcgtaatta ctgaggaatg gcgtgcccat caggatgcga aatggcgcac
    10981 ctctcaggcg cgccgccctt tcctgctggc taatacccgt aatttagacc gtgaacctat
    11041 cggcctgatg gatactgtcg ccacggtcac accggcacaa ttgcgccaat tttatcaacg
    11101 ctggtatcaa ccaaataata tgacctttat cgtggtcggc gatatcgaca gtaaagaagc
    11161 gctggcgctg ataaaggata atttaagtaa gcttccggct aacaaagcag ctgaaaatcg
    11221 cgtctggccg acaaaagccg aaaaccacct gcgctttaat atcattaatg ataaagaaaa
    11281 ccgggtgaac ggcatcgcac tctattatcg cctgccaatg gtacaagtga acgatgagca
    11341 aagctttatc gaacaagctg aatggagcat gttagttcag ctgttcagtc aacgtctgca
    11401 ggaacgcata cagtcgggcg agttgaagac tatttctggc ggcactgcgc gcagcgttaa
    11461 aattgcaccc gattatcagt cgctgttttt ccgtgtaaat gcacgagacg ataatatgca
    11521 ggatgctgcg aatgcattaa tgtcagagtt ggcaaccatt gatcagcatg gtttttctgc
    11581 tgaagaactc gatgatgtca aatctacccg cctcacctgg ctgaaaaatg cggttgatca
    11641 gcaagctgaa cgtgatttac gtatgctgac cagtcgcctg gcatccagct cattaaataa
    11701 tacgccgttc ttgtcgccgg aagagacata tcaactttcg aaacgtctgt ggcagcaaat
    11761 taccgtgcaa agtctggcgg aaaaatggca gcagttaaga aagaaccagg acgcattttg
    11821 ggagcaaatg gtaaacaatg agcttgccgc caaaaaagca ttgtctcctg cggctatcct
    11881 ggcgctggaa aaagagtacg ccaacaaaaa gctggcggct tacatcttcc caggcagaaa
    11941 tttatcgtta acagtagacg ctgacccaca ggcggaaatt agcagcaaag aaacgctggc
    12001 tgagaatctg acatcattaa cactttccaa tggtgccagg gttattctgg caaaatccgc
    12061 gggtgaagag caaaagctac aaattactgc cgtatcgaat aaaggcgatt taagtttccc
    12121 tgcgcagcaa aaatcactta tcgcgctggc aaataaagca gtaagcggaa gcggcgttgg
    12181 tgagctctcc tcttccagcc tgaaacgctg gagtgcggaa aattcggtaa ccatgagcag
    12241 taaagtcagt ggcatgaata cgttgctctc cgttagcgcg cggactaata accctgaacc
    12301 tggttttcag ttgattaacc agcgaatcac ccacagcacg attaacgaca atatttgggc
    12361 atcgctacaa aatgctcaaa ttcaggcgtt gaaaacgctc gaccagcgtc cagcggagaa
    12421 attcgcccag cagatgtatg agacgcgcta tgctgatgac cgcacgaaat tactgcaaga
    12481 aaatcagatt gtacagttta ctgccgcaga tgcgctggct gccgatcgcc agttgttttc
    12541 atctccagcg gatatcacgt ttgtcattgt cggtaatgtc tcagaagaca aactcgtggc
    12601 gttaattacg cgttacttag gatcaatcaa acactctgat tcgccattag ccgcaggtaa
    12661 accattaact cgcgcgacgg acaacgcatc ggttactgta aaagaacaaa atgaacctgt
    12721 ggcacaggtt tcacagtgga agcgttatga ttcccggaca cctgttaatc tggcgacgcg
    12781 tatggcgctc gatgctttta acgtcgcact ggcaaaagat ctacgtgtta atattcgtga
    12841 acaggcatct ggagcataca gcgtttcttc tcgcctctcg gttgatcctc aggccaaaga
    12901 tatcagtcat ttgctggctt ttacttgtca accagaacga catgatgaac tgttaacgtt
    12961 agcgaatgaa gtgatggtta agcgtctggc taaagggatc agtgagcaag aactgaatga
    13021 ataccagcaa aacgttcagc gcagcctcga tatccaacag cgtagcgttc aacaattagc
    13081 gaacactatt gtaaatagtc ttattcaata tgacgatcct gcagcatgga ctgagcagga
    13141 gcaattgttg aaacaaatga cggtagagaa tgttaacact gccgttaaac aatatctttc
    13201 tcatccggta aatacttata ccggagtatt attgccaaaa taataacagc cccgtcaaca
    13261 catcgttggc ggggatttta gcaatattcg ctatttttat gcaataattt tataaatgcg
    13321 ttcaaaataa taatcaagta ctaatagtga tattttaagg tctgattttt acgtgataat
    13381 tcaggagaca cagaatgcgc ataaaaataa cagcataaaa caccttacca ccacccaaga
    13441 atttcatatt gtattgtttt tcaatgaaaa aacattattc gcgtaatatc tcacgataaa
    13501 taacattagg attttgttat ttaaacacga gtccttttca cttgcttact ttatcgataa
    13561 atcctacttt tttaatgcga tccaatcatt ttaaggagtt taaaatggat aagaagcaag
    13621 taacggattt aaggtcggaa ctactcgatt cacgttttgg tgcgaagtct atttccacta
    13681 tcgcagaatc aaaacgtttt ccgctgcacg aaatgcgcga cgatgtcgca ttccagatta
    13741 tcaatgacga attatatctt gatggcaacg ctcgtcagaa cctggccact ttctgccaga
    13801 cctgggacga cgaaaatgtc cacaaattga tggatttatc cattaacaaa aactggatcg
    13861 acaaagaaga atatccgcaa tccgcagcca tcgacctgcg ttgcgtaaat atggttgccg
    13921 atctgtggca tgcgcctgcg ccgaaaaatg gtcaggccgt tggcaccaac accattggtt
    13981 cttccgaggc ctgtatgctc ggcgggatgg cgatgaaatg gcgttggcgc aagcgtatgg
    14041 aagctgcagg caaaccaacg gataaaccaa acctggtgtg cggtccggta caaatctgct
    14101 ggcataaatt cgcccgctac tgggatgtgg agctgcgtga gatccctatg cgccccggtc
    14161 agttgtttat ggacccgaaa cgcatgattg aagcctgtga cgaaaacacc atcggcgtgg
    14221 tgccgacttt cggcgtgacc tacactggta actatgagtt cccacaaccg ctgcacgatg
    14281 cgctggataa attccaggcc gataccggta tcgacatcga catgcacatc gacgctgcca
    14341 gcggtggctt cctggcaccg ttcgtcgccc cggatatcgt ctgggacttc cgcctgccgc
    14401 gtgtgaaatc gatcagtgct tcaggccata aattcggtct ggctccgctg ggctgcggct
    14461 gggttatctg gcgtgacgaa gaagcgc
//
LOCUS       DADMHC010000097        14387 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.097, whole genome shotgun sequence.
ACCESSION   DADMHC010000097 DADMHC010000000
VERSION     DADMHC010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14387)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14387)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14387
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.097"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            36..227
                     /locus_tag="JNZ57_002410"
     CDS             36..227
                     /locus_tag="JNZ57_002410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000886534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter"
                     /protein_id="HAY8828608.1"
                     /translation="MLDNLIGAPPFWQLAHSSADNFPALTVSHFITANLLPVMLGNII
                     GGAVLVSMCYRAIYLRQES"
     gene            complement(265..1326)
                     /locus_tag="JNZ57_002411"
     CDS             complement(265..1326)
                     /locus_tag="JNZ57_002411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HAY8828609.1"
                     /translation="MLEMLMQWYRRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLV
                     AIVLAYLLEWPTVRLQSIGCSRRWATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRD
                     MPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRSRMLTMGDSVVKISLASLVGLL
                     TIAVYLVLVPLMVFFLLKDKEQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVL
                     EMIVVGIATWLGFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGT
                     EFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPL
                     ATLIKAVIHAWPDGQIAQE"
     gene            1539..3002
                     /gene="bepA"
                     /locus_tag="JNZ57_002412"
     CDS             1539..3002
                     /gene="bepA"
                     /locus_tag="JNZ57_002412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-barrel assembly-enhancing protease"
                     /protein_id="HAY8828610.1"
                     /translation="MFRQLKKNLVATLIAAMTIGQVAPAFADNADTLPDMGTSAGSTL
                     SIGQEMQMGDYYVRQLRGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINND
                     EINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHLTQRHLARAMEDQQRSAPLT
                     WVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFD
                     PQAMPTFLEKLLDQARYSSRPPEILLTHPLPESRLADARNRANQMRPMVVQSSEDFYL
                     AKARTLGMYNSGRNQLTSDLLDEWAKGNVRQQRAAQYGRALQAMEANKYDEARKTLQP
                     LLAAEPGNAWYLDLATDIDLGQNKANEAINRLKNARDLRTNPVLQLNLANAYLQGGQP
                     QEAANILNRYTFNNKDDSNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLL
                     SSASSQVKLGSLQQARYDARIDQLRQLQERFKPYTKM"
     gene            3023..3382
                     /gene="arsC"
                     /locus_tag="JNZ57_002413"
     CDS             3023..3382
                     /gene="arsC"
                     /locus_tag="JNZ57_002413"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311384.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HAY8828611.1"
                     /translation="MTKQVKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAAT
                     LRDLLKMLGMNSARELMRQKEDLYKELNLADSSLSEEALIQAMVDNPKLMERPIVVAN
                     GKARIGRPPEQVLEIVG"
     gene            complement(3520..4266)
                     /gene="hda"
                     /locus_tag="JNZ57_002414"
     CDS             complement(3520..4266)
                     /gene="hda"
                     /locus_tag="JNZ57_002414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA inactivator Hda"
                     /protein_id="HAY8828612.1"
                     /translation="MVNFSRFCEILVEVSLNTPAQLSLPLYLPDDETFASFWPGDNSS
                     LLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVP
                     EVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNL
                     GLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRT
                     LFMTLDQLDRASITAQRKLTIPFVKEILKL"
     gene            complement(4316..5605)
                     /gene="uraA"
                     /locus_tag="JNZ57_002415"
     CDS             complement(4316..5605)
                     /gene="uraA"
                     /locus_tag="JNZ57_002415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil permease"
                     /protein_id="HAY8828613.1"
                     /translation="MTRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPA
                     TVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFC
                     LVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTII
                     ISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTL
                     YTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVI
                     SGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVM
                     GGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGM
                     ALATIVGIGLSLIFKLISVLRPEEVVLDAEEADITDK"
     gene            complement(5691..6317)
                     /gene="upp"
                     /locus_tag="JNZ57_002416"
     CDS             complement(5691..6317)
                     /gene="upp"
                     /locus_tag="JNZ57_002416"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HAY8828614.1"
                     /translation="MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEAT
                     ADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMY
                     RNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLV
                     AAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK"
     gene            6641..7678
                     /gene="purM"
                     /locus_tag="JNZ57_002417"
     CDS             6641..7678
                     /gene="purM"
                     /locus_tag="JNZ57_002417"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HAY8828615.1"
                     /translation="MTDKTSLSYKDAGVDIDAGNALVGRIKGVVKKTRRPEVMGGLGG
                     FGALCALPQKYREPVLVSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEP
                     LFFLDYYATGKLDVDTASAVISGIAEGCLQSGCSLVGGETAEMPGMYHGEDYDVAGFC
                     VGVVEKSEIIDGSKVSDGDVLIALGSSGPHSNGYSLVRKILEVSGCDPQTTELDGKPL
                     ADHLLAPTRIYVKSVLELIEKVDVHAIAHLTGGGFWENIPRVLPDNTQAVIDESSWQW
                     PEVFNWLQTAGNVERHEMYRTFNCGVGMIIALPAPEVDKALALLNANGENAWKIGIIK
                     ASDSEQRVVIE"
     gene            7678..8316
                     /gene="purN"
                     /locus_tag="JNZ57_002418"
     CDS             7678..8316
                     /gene="purN"
                     /locus_tag="JNZ57_002418"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HAY8828616.1"
                     /translation="MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLE
                     RARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAG
                     RLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGD
                     TEDDVTARVQTQEHAIYPLVISWFADGRLKMHENAAWLDGQRLPPQGYAADE"
     gene            8488..10554
                     /gene="ppk1"
                     /locus_tag="JNZ57_002419"
     CDS             8488..10554
                     /gene="ppk1"
                     /locus_tag="JNZ57_002419"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HAY8828617.1"
                     /translation="MGQEKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSN
                     NLDEFYKVRFAELKRRIIISEEQGSNSHSRHLLGKIQSRVLKADQEFDGLYNELLLEM
                     ARNQIFLINERQLSVNQQNWLRHYFKQYLRQHITPILINPDTDLVQFLKDDYTYLAVE
                     IIRGDTIRYALLEIPSDKVPRFVNLPPEAPRRRKPMILLDNILRYCLDDIFKGFFDYD
                     ALNAYSMKMTRDAEYDLVHEMEASLMELMSSSLKQRLTAEPVRFVYQRDMPNALVEVL
                     REKLTISRYDSIVPGGRYHNFKDFINFPNVGKANLVNKPLPRLRHIWFDKAQFRNGFD
                     AIRERDVLLYYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHN
                     GKKVTVVVELQARFDEEANIHWAKRLTEAGVHVIFSAPGLKIHAKLFLISRKENGEVV
                     RYAHIGTGNFNEKTARLYTDYSLLTADARITNEVRRVFNFIENPYRPVTFDYLMVSPQ
                     NSRRLLYEMVDREIANAQQGLPSGITLKLNNLVDKGLVDRLYAASSSGVPVNLLVRGM
                     CSLIPNLEGISDNIRAISIVDRYLEHDRVYIFENGGDKKVYLSSADWMTRNIDYRIEV
                     ATPLLDPHLKQRVLDIIDILFSDTVKARYIDKELSNRYVPRGNRRKVRAQLAIYDYIK
                     SLEQPE"
     gene            10559..12100
                     /gene="ppx"
                     /locus_tag="JNZ57_002420"
     CDS             10559..12100
                     /gene="ppx"
                     /locus_tag="JNZ57_002420"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HAY8828618.1"
                     /translation="MPIHDKSPRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQR
                     VHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFL
                     KRVEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI
                     LVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASG
                     TIKAAHEVLMEMGEKDGIITPERLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLA
                     ILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTASSLANQYHIDSEQAR
                     RVLDTTMQMYEQWREQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQNS
                     DLPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQ
                     ATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEEST
                     PEIAA"
     gene            complement(12190..14378)
                     /gene="pdeF"
                     /locus_tag="JNZ57_002421"
                     /pseudo
     CDS             complement(12190..14378)
                     /gene="pdeF"
                     /locus_tag="JNZ57_002421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416998.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase
                     PdeF"
BASE COUNT         3791 a         3687 c         3593 g         3316 t
ORIGIN      
        1 cgacgggact ttttataccc cgcaggggtc ataacatgct tgacaactta ataggggcac
       61 cccccttctg gcaactggcg cacagtagcg cagacaattt tccggcactg acggtcagcc
      121 attttattac cgccaatctg ctcccggtga tgctgggtaa tattatcggc ggtgcagtgc
      181 tggtgagtat gtgttatcgg gctatttatt tacgtcagga atcctgaaaa atcagcccgg
      241 cgaaacagtt cgtcgggctg aagattattc ttgcgcgatt tgcccatcgg gccaggcgtg
      301 gatcacggct ttgatcagcg tcgccaatgg aatggcgaag aatacgcccc agaatcccca
      361 caaaccaccg aagatcacca ccgataaaat aatcaccagc ggatgcaggt taaccgcttc
      421 ggagaacaac accggtacta gcaggttgcc gtccagcgcc tgaataatca gatacaccgc
      481 gaagcagctc cagaattccg tgcctgcgcc aaactggaat agcgccacgc caaccaccgg
      541 aatggtcacc acaaatgcgc caatgtacgg aataagaacc gagaagccga ccagcaccgc
      601 cagcagcagc gaatagttca gcccaaagag caagaacccc agccaggtgg cgatccccac
      661 cacgatcatc tccagcactt tgccgcggat atagttggtg atttgttgat tcatctcctt
      721 ccacacctgt cctgccagtc cacggttgcg cggcagcacc cgacgaacgg cgttcagcat
      781 ctgctctttg tctttcagca ggaagaagac catcaatggc accagcacca gatagacggc
      841 aatggtcagc aaaccgacca gcgaggcgag ggaaattttc accaccgaat cgcccatggt
      901 cagcatccga ctgcgcatat tttcggccat tgcatcaata atgcccgcgt ccattaacgc
      961 cggatagcgg cgcggcaacg tggcggcaaa gtcagaaagc ttattgagca tccccggcat
     1021 atcgcggatt aagtagatgc cctgttgcca ggcgataggc agtaccacga acgccatcag
     1081 tagcaatata ccgacaaaaa ccaccaatac aatcgacgtc gcccagcggc gggagcagcc
     1141 aatagattgc aggcgcacgg ttggccattc cagcaaatag gccagcacaa tagccaccag
     1201 caacggagca agcaggccac taaagaaaaa gataatgcca aatccggcaa ctaaaataac
     1261 cagcaaggca atcgcttccg ggtcgctaaa acggcggcga taccattgca tcaacatttc
     1321 gagcataaaa accttccctg aacctcaaga gcgggattgc gatccgcaat tgtatcgaaa
     1381 tgtcacaaaa aagacttcgc tttttatgac ggattcagga aactgaaaag tcatttgagt
     1441 gggctaatct tcgccgttac actcaaaggc ggcgcggtgg gaacgatatt tcacagtatc
     1501 ggtcaaatga ctatcttcag aaatacagga tagaggttat gttcaggcag ttgaaaaaaa
     1561 acctggttgc aaccctcatt gctgctatga ccattggtca ggtagccccg gcgtttgccg
     1621 acaacgcaga caccttgccg gatatgggaa cctccgcagg aagcacgctt tccattggtc
     1681 aggaaatgca gatgggcgac tattatgtcc gccagctacg cggcagcgcg ccgttaatta
     1741 atgacccgct gttaacgcaa tatattaatt cgctggggat gcgtctggtt tcgcatgcca
     1801 attcggttaa gacaccgttt catttttttc taatcaacaa cgacgaaatt aacgcctttg
     1861 ctttctttgg cggcaacgtg gtgctgcact ctgccctgtt ccgttattcc gataacgaaa
     1921 gtcaactggc ttcagttatg gcgcacgaaa tctcccacct cacccaacgt cacctggcgc
     1981 gagcgatgga agatcagcag cgcagcgcgc cgctgacctg ggtcggcgcg ttaggttcta
     2041 ttttactggc gatggccagt ccgcaggcgg ggatggcggc gctgaccggt acactggcgg
     2101 gaacgcgtca ggggatgatc agtttcaccc agcaaaatga acaggaagcg gaccgcattg
     2161 gtattcaggt gctgcaacgc tcgggattcg atccgcaggc gatgccaacc ttcctcgaaa
     2221 aattactcga tcaggcgcgt tactcctcgc gcccgccgga aattttattg actcacccgt
     2281 tgccggaaag tcgtctggca gatgcccgca accgtgctaa tcagatgcga ccgatggtgg
     2341 tgcagtcgtc ggaagatttc tatctggcga aagcgcgcac actggggatg tataattccg
     2401 gacgtaacca gctcaccagt gatttgctgg atgaatgggc gaaaggaaac gttcgtcagc
     2461 aacgagcggc gcaatatggt cgtgctttac aggcgatgga agccaataaa tacgacgagg
     2521 cgcgtaaaac gctgcaaccg ttactggcgg cagaacctgg caacgcatgg tatctcgatc
     2581 tggctaccga tatcgatctt gggcaaaaca aagccaatga ggcaatcaat cgcctgaaaa
     2641 atgcccgtga tttgcgcacc aatccggtgt tgcagctcaa cctggcaaac gcttatctgc
     2701 aaggcggtca accacaagaa gcggccaata ttctcaatcg ctacaccttt aataataaag
     2761 atgacagcaa cggctgggat ttactggcac aggcggaagc cgcgctaaat aaccgcgatc
     2821 aggagctggc tgcgcgagca gaaggttatg cgctcgccgg acgactcgat caggccattt
     2881 cgctgttgag tagcgccagt tcgcaggtga aattaggcag cctgcaacaa gcgcgttacg
     2941 atgcgcgcat cgaccagttg cgccagctgc aggaacgctt taagccttat accaagatgt
     3001 aattcgcatt aaaggaagaa caatgaccaa acaggtaaaa atctaccata acccacgctg
     3061 ttcaaagagc cgggaaacgc tgaacctgct gaaagaaaac ggcgtggagc cagaagtggt
     3121 actctacctt gagacacccg ccgatgcggc aacgctgcgc gatttgctga aaatgctggg
     3181 gatgaatagc gcccgtgaat tgatgcgcca gaaagaggat ctttataaag aactgaacct
     3241 ggctgacagt tcgcttagcg aagaggcgct gattcaggca atggtggata atccgaagct
     3301 gatggagcgc ccgattgtgg tcgcgaatgg caaagcgcgg attggtcgtc caccggagca
     3361 ggtactggaa atcgtgggtt aagatgtgct ccatcgctag ttgaagcaca ttgccggatg
     3421 cgacgcttgc catgtcttat ccggcctacg aatactatgg attaacttcg cgtagttcgg
     3481 ataaggcgtt cgcgccgcat ccgacaataa acaccttatc tacaacttca gaatttcttt
     3541 cacaaacgga atggtcagct tacgttgcgc ggtaatcgac gcacgatcca actgatccaa
     3601 cgtcataaat agcgtgcgca tttctctgtc gagccgcttc agcaagaaac gccccacatc
     3661 ttccggcagt tcaaaaccac gcaaacgcgc gcgtaactgt agcgcctgca acttatcttc
     3721 atcagaaagt ggctgcaatt tgtagatctg cccccagtcg agtcgcgacg cgagatccgg
     3781 taatcccaga ttcaactgcc gcggtggacg atcgccggtg atcaacaacc gtgttttgcc
     3841 cgattccaga attcgattgt agagatcgaa aatcgccatc tcccacaact catcgcctgc
     3901 aatacactca atgttgtcga tacaaaccag cgacaaatgc tccataccgt cgagcacttc
     3961 cggaacaaac caggtgcgtt tatccagcgg gacatagccc accgcatcgc cacgctgcga
     4021 caattccgcg caagccgcgt gcagcagatg gctgcgcccc gcgccttcgc gtgcccagag
     4081 atagatgtaa ccgctatgtt cctgacgcag cacgttttgc agcgcggcca gtaaagagga
     4141 gttatccccc ggccagaaac ttgcaaaggt ttcgtcgtca ggaagataaa gtggcaaaga
     4201 gagctgtgcc ggtgtgttca gagatacctc aaccaggatt tcacaaaatc gcgagaagtt
     4261 taccacagaa tcccatgatg tttgaaccgg gcagcaacac tgcccggtcg gtacattatt
     4321 tgtctgttat atccgcctct tctgcgtcca gcaccacttc ttcagggcgc agcacactga
     4381 tcagtttgaa aatcaaactt aagccgatac cgacgatggt cgccagcgcc atacctttta
     4441 actccgccgc gccgatgttt accttcgcgc cactgacgcc gatgatcaaa atcacggaag
     4501 tcaggatcag gttctgtgct ttgttgtaat ccactttcga ttcgatcaaa acacgaatac
     4561 cggaagcacc gatgacacca taaagcagca gtgaaacgcc gcccatcacc ggcaatggga
     4621 tcatctggat agcggcagcc agtttaccga cgcaggaaag caggatagcg aaaatcgccg
     4681 ccccgccgat aacccaggta ctgtaaacac gggtgatcgc catcacgcca atgttttctc
     4741 cgtaagtggt atttggcgtg gagccaaaga agccggagat cacggtcgac aggccgttag
     4801 caaacatcga acggtgcaga cctggatcgc gcagcagatc ttttttgacg atattagccg
     4861 ttactaccag gtgccctacg tgttcggcaa taaccactaa cgccgctggc agaatagtca
     4921 gaatggcaaa ccactcgaag cgcggcgtat agagggttgg cagcgcaaac cagtgagcat
     4981 taataatcgg cgtggtatcg acaattccca ttgcgaaaga gagcgcgtag cccaccagca
     5041 cgccaattaa aatcgggata attgccagga aaccacgaaa cagcacagaa cctaaaaccg
     5101 tgaccgccag ggtggtaata gagatgatga tggttttgga gtctggcgtt tgcccttcag
     5161 ccgggagtaa acccgccata ccggcagcta cgcccgccag ctccagaccg atgacggcaa
     5221 cgattgcgcc cattgccgca ggtggaaaca gcacgtccag ccagccggtc cccgctttct
     5281 tcacgataaa agaaaccagg cagaacagca cgccgcacat aataaagccg cccagcgcga
     5341 cttcataccc taacggcaac agtaacaata ccggtgaaat aaaggcaaag ctggaaccaa
     5401 gataagccgg aattttccct ttacagatga agagatacag cagcgttcca ataccgttaa
     5461 ataacagtac agtcgccggg ttaatatgaa ataagacggg caccaggacg gttgcaccaa
     5521 acatggcgaa caaatgttgc aaactaagcg ggattgtctg taaaagtggc ggtctttcac
     5581 tcaccccgat agcacggcgc gtcatagtat tatcctctgt attatgtgtt ataggcgctt
     5641 tactcaaaaa aaagccgact cttaaagtcg gctttaatta tttttattct ttatttcgta
     5701 ccaaagattt tgtcaccggc atcgccgagg cccggaataa tgtatccgtg ctcgttcagt
     5761 ccctgatcaa tcgatgcggt atacagttcg acgtccgggt gcgctttttc cagcgcagcg
     5821 ataccttctg gcgcagcgac cagcaccaga actttgatgc tgctgcagcc cgcttttttc
     5881 agcaggtcga tggtcgcgat aacggaacca ccggttgcca gcattgggtc aacgatcagc
     5941 gccatacgct catcgatgtt agaaaccagt ttctggaagt acggtaccgg ctccagcgtt
     6001 tcttcattac ggtacatacc gacaacgctg atgcgcgcgc tcggaacatt ttccagcaca
     6061 ccgtccatca taccaagacc cgcacgcaga attggcacaa cggtaatttt cttacctttg
     6121 atctggtcga tttctaccgg gccgttccag ccttcgatag ttactttttc cgtttcgagg
     6181 tcggcggtcg cttcgtaagt cagcaggcta cccacttcgg aagcgagttc gcgaaagcgc
     6241 ttggtgctga tatcttgctc acgcatcagt cccagcttgt gtttgacgag tgggtgtttg
     6301 acttccacga tcttcatact ctttctcctt tgaggggcag ccacaaaaaa atcgacggat
     6361 tatacctcct ttcttcaagg cggcaatatt cttttcgttg actttagtca aaatgataac
     6421 gatttgagat aaagttattt tatattcaaa tggttatgaa agaagatcat tccatccgaa
     6481 aactaacctt tgccctggca caagtcttct ttcgccgcgc gtctggggaa aagacgtgca
     6541 aaaaggttgt gcaaagcagt ctcgcaaacg tttgctttcc ctgttagaat tgcgccgaat
     6601 tttatttttc taccgcaagt aacgcgtggg gacccaagca gtgaccgata aaacctctct
     6661 tagctacaaa gatgccggtg ttgatattga cgcgggtaat gctctggttg gaagaatcaa
     6721 aggcgtagtg aagaaaacgc gtcgtccgga agtgatgggc ggtctgggcg gcttcggtgc
     6781 gctgtgtgca ttgccgcaaa aatatcgtga acccgtgctg gtttccggca ctgacggcgt
     6841 aggtaccaag ctgcgtctgg caatggactt aaaacgtcac gacaccattg gtattgatct
     6901 ggtcgccatg tgcgttaatg acctggtggt gcaaggtgca gaaccgctgt ttttcctcga
     6961 ctattacgca accggaaaac tggatgttga taccgcttca gcggtgatca gcggcatcgc
     7021 ggaaggttgt ctgcaatcgg gctgttcact ggtgggtggc gaaacggcag aaatgccggg
     7081 gatgtatcac ggtgaagatt acgatgtcgc gggtttctgc gtgggcgtgg tagaaaaatc
     7141 agaaatcatc gacggctcta aagtcagcga cggcgatgtt ctgattgcac tcggttccag
     7201 cggtccgcac tcgaacggct attcgctggt gcgcaaaatt cttgaagtca gcggttgtga
     7261 tccgcaaacc accgaacttg atggtaagcc attagccgat catctgctgg caccgacccg
     7321 catttacgtg aagtcagtgc tggagttgat tgaaaaggtc gatgtgcatg ccattgcgca
     7381 cctgaccggc ggcggcttct gggaaaacat tccacgcgta ttgccagata atactcaggc
     7441 agtgattgat gaatcttcct ggcagtggcc ggaagtgttc aactggctgc aaacggcagg
     7501 taacgttgag cgccatgaaa tgtatcgcac cttcaactgc ggcgtcggga tgattattgc
     7561 cctacctgct ccggaagtgg acaaagccct cgccctgctc aatgccaacg gtgaaaacgc
     7621 gtggaaaatc ggtatcatca aagcctctga ttccgaacaa cgcgtggtta tcgaataatg
     7681 aatattgtgg tgcttatttc cggtaacgga agtaatttac aggcaattat tgacgcctgt
     7741 aaaaccaaca aaattaaagg caccgtacgg gcagttttca gcaataaggc cgacgcgttc
     7801 ggccttgaac gcgcccgcca ggcgggtatt gcaacgcata cgctcatcgc cagcgcgttt
     7861 gacagtcgtg aagcctatga ccgggagttg attcatgaaa tcgacatgta cgcacccgat
     7921 gtggtcgtgc tggctggttt tatgcgcatt ctcagcccgg cgtttgtctc ccactatgcc
     7981 gggcgtttgc tgaacattca cccttctctg ctgccgaaat atcccggatt acacacccat
     8041 cgtcaggcgc tggaaaatgg cgatgaagag cacggtacat cggtgcattt cgtcaccgat
     8101 gaactggacg gtggcccggt tattttacag gcgaaagtcc cggtatttgc tggtgatacg
     8161 gaagatgacg tcaccgcccg cgtgcaaacc caggaacacg ctatttatcc actggtgatt
     8221 agctggtttg ccgatggtcg tctgaaaatg cacgaaaacg ccgcgtggct ggatggtcaa
     8281 cgtctgccgc cgcagggcta cgctgccgac gagtaatgcc cccgtagtta aagcgccagc
     8341 tctgccgctg gcgtttttca attcacctgt aaatcgcaag ctccagcagt ttttttcccc
     8401 cttttctggc atagttggac atctgccaat attgctcgcc ataatatcca ggcagtgtcc
     8461 cgtgaataaa acggagtaaa agtggtaatg ggtcaggaaa agctatacat cgaaaaagag
     8521 ctcagttggt tatcgttcaa tgaacgcgtg cttcaggaag cggcggacaa atctaacccg
     8581 ctgattgaaa ggatgcgttt cttggggatc tattccaata accttgatga gttctataaa
     8641 gtccgcttcg ctgaactgaa gcgacgcatc attattagcg aagaacaagg ctccaactct
     8701 cattcccgcc atttactggg caaaattcag tcccgggtgc tgaaagccga tcaggaattc
     8761 gacggcctct acaacgagct attgctggag atggcgcgca accagatctt cctgattaat
     8821 gaacgccagc tctccgtcaa tcaacaaaac tggcttcgtc attattttaa gcagtatctg
     8881 cgtcagcaca ttacgccgat tttaatcaat cctgacactg acttagtgca gttcctgaag
     8941 gatgattaca cctatctggc ggtggaaatt atccgtggag acaccatccg ttacgcgctg
     9001 ctggagatcc catcagataa agtgccgcgc tttgtgaatt taccgccaga agcgccgcgt
     9061 cgacgcaagc cgatgattct tctggataac attctgcgtt actgccttga tgatattttc
     9121 aaaggcttct ttgattatga cgcgctgaat gcctattcaa tgaagatgac ccgcgatgcc
     9181 gaatacgatt tagtgcatga gatggaagcc agcctgatgg agttgatgtc ttccagtctc
     9241 aagcaacgtt taactgctga gccggtgcgt tttgtttatc agcgcgatat gcccaatgcg
     9301 ctggttgaag tgttacgcga aaaactgact atttcccgct acgactccat cgtccccggc
     9361 ggtcgttatc ataattttaa agactttatt aatttcccca atgtcggcaa agccaatctg
     9421 gtgaacaaac cactgccgcg tttacgccac atttggtttg ataaagccca gttccgcaat
     9481 ggttttgatg ccattcgcga acgcgatgtg ttgctctatt atccttatca cacctttgag
     9541 catgtgctgg aactgctgcg tcaggcttcg ttcgacccga gcgtactggc gattaaaatt
     9601 aacatttacc gcgtggcgaa agattcacgc atcatcgact cgatgatcca cgccgcacat
     9661 aacggtaaga aagtcactgt ggtggttgag ttacaggcgc gtttcgacga agaagccaac
     9721 attcactggg cgaagcgcct gaccgaagca ggcgtgcacg ttatcttctc tgcgccgggg
     9781 ctgaaaattc acgccaaact gttcctgatt tcacgtaaag aaaacggtga agtggtccgt
     9841 tacgcacaca tcgggaccgg gaactttaac gaaaaaaccg cgcgtcttta tactgactat
     9901 tcgttgctga ccgcagatgc gcgtatcacc aacgaagtac ggcgggtatt taactttatt
     9961 gaaaacccat accgcccagt gacatttgat tatttaatgg tgtcaccgca aaactctcgc
    10021 cgtctgttat atgaaatggt agaccgcgaa atcgccaacg cgcagcaagg gctgcccagt
    10081 ggtatcaccc tgaagctaaa taaccttgtc gataaaggct tggttgatcg tctgtatgcg
    10141 gcctccagct ccggcgtacc ggttaatctg ctggttcgcg gaatgtgttc gctgatcccc
    10201 aatctggaag gcattagcga caacattcgt gccatcagta ttgttgaccg ttaccttgaa
    10261 catgaccggg tttatatttt tgaaaatggc ggcgataaaa aggtctacct ttcttccgcc
    10321 gactggatga cgcgcaatat tgattatcgt attgaagtgg cgacaccgct gctcgatccg
    10381 cacctgaagc agcgggtgct ggacatcatc gacatattgt tcagcgatac ggtcaaagca
    10441 cgttatatcg ataaagaact cagtaatcgc tacgttcccc gcggcaatcg ccgcaaagta
    10501 cgggcgcagt tggcgattta cgactacatc aaatcactcg aacaacctga ataaccctat
    10561 gccaatacac gataaatccc ctcgtccgca ggagtttgct gcggtcgatc ttggttcaaa
    10621 cagttttcac atggtcatag cccgtgtggt agatggtgcc atgcagatta ttggccgcct
    10681 gaaacagcga gtgcatctgg cggacggcct ggggccagat aatatgttga gtgaagaggc
    10741 aatgacgcgc ggtttgaact gtctgtcgct gtttgccgaa cggctacaag ggttttctcc
    10801 tgccagcgtc tgtatagtcg gcacccatac gctgcgtcag gcgctgaacg ccactgactt
    10861 tctgaaacgc gtggaaaagg tcattcccta cccgattgaa attatttccg gtaatgaaga
    10921 agcccgtctg atttttatgg gcgtggaaca tacccaaccg gagaaaggtc gcaaactggt
    10981 tattgatatt ggcggcggat ctacggaact ggtgattggt gaaaatttcg aaccgattct
    11041 cgttgaaagc cgccggatgg gttgtgtcag ctttgcccag ctttacttcc ctggcggggt
    11101 catcaataaa gagaattttc agcgcgctcg tatggcggca gcacaaaaac tggaaacttt
    11161 aacctggcaa ttccgtattc agggctggaa cgtggcaatg ggcgcttccg gtaccataaa
    11221 agccgcccat gaagtgttaa tggaaatggg cgagaaagac ggaataatta ccccggaacg
    11281 tctggaaaaa ctggtaaaag aagttttacg tcaccgtaat ttcgcatcgc tgagtttacc
    11341 gggtctttcc gaagagcgga aaacagtctt cgttcctgga ctggcgattt tatgcggtgt
    11401 gtttgatgct ttagccatcc gtgaactgcg cctttctgac ggggcgttac gcgaaggcgt
    11461 actgtacgaa atggaaggac gtttccgtca tcaggatgtg cgtagtcgca ccgccagcag
    11521 cctcgccaac cagtatcaca tcgacagcga acaggcccga cgggtgctgg ataccactat
    11581 gcaaatgtac gaacagtggc gggaacagca accgaagctg gcgcatccgc aactggaggc
    11641 gctactgcga tgggccgcca tgctgcatga ggtcgggttg aatatcaacc acagcggttt
    11701 gcatcgccac tccgcttata ttctgcaaaa cagtgacttg ccgggtttta atcaggaaca
    11761 gcagctgatg atggcgacac tggtgcgcta tcaccgcaaa gcgattaaac tcgacgatct
    11821 gccgcgcttt accttgttta agaagaaaca gttcctgcca ctgattcagc tattgcgcct
    11881 tggcgtatta ctcaacaatc aacgtcaggc aaccaccaca ccgccaacat tgacactgat
    11941 tactgatgac agtcactgga cactgcgttt cccgcatgac tggtttagtc agaatgcgtt
    12001 ggtactgctt gatctggaaa aggagcaaga atactgggaa ggcgtggctg gctggcggtt
    12061 gaaaattgaa gaagaaagta cacctgaaat cgccgcttaa tgctttgcgg gccgacgaga
    12121 aatggcggcc cgcattattc aggcactttc gcgaatgggt tcgatttcat tcaacgtatc
    12181 aattaacggc tacggcttac caataagata accctgcata taatcgatcc ccaaagagag
    12241 caccgcctcg cggatctctt cgttttcaac gtactctgcc actacccgca ttttcttcat
    12301 tcgcgccagg tggcaaatcg atgccactat ctgataatcc agactatttg acacaatatt
    12361 gcggataaaa ctgccgtcaa ttttaagcag atcggcattc acatttttaa gccgtgcata
    12421 gctggcgtag ccggtgccga aatcatcaat cgcaatctgg cagcctaatt cctgaagatg
    12481 ctgcaaggtg atttgcgcct gcttaacatt ggtcagagca ttactttcgg tgacttcaaa
    12541 aataagttgc cacgcttcaa tctgatattt agccagcaac tgacttcaaa aggaaaacga
    12601 gcctgacata ccgaggttgg agacagatta atagcaaaac ggtgagcggg catcttcgct
    12661 ctgttttcag ccataaattg cagcgtatgc tcaatgaccc acatgtcgat actcgacgat
    12721 aaaccaaatt cgtgcgcgac cggcaagaag ctatcggggc tgatcagttc atcattctca
    12781 cctttcatgc gcagaagaat ttcatggtaa acatcaccac gcataccggt aatcggctgg
    12841 gccatcagga aaaaatggtt gtgttccagc gcctgctgta gtcgattcat catcgcgact
    12901 ttatctttca attcgcgttg caaatacatt gccccgcgac gctgcatatt ttccggggcg
    12961 ttggtcacga tggaaagttc ggcgaccgta tttagctctc ccagcagcag gtagatatga
    13021 ttcactggcg agcgcacata gcagtaactg acgccaatct gcggttgcat cggcatgcca
    13081 tcccaaaaga aacgaaattg cttgagatgg ctatccagtg cggtaatgcg ctcctggtgc
    13141 gattctgtat tcagtcgcag cgcgagatcg ttacccgaaa gctgataaac atcttcaccc
    13201 ggttccagca agggtgacag ccagtgagaa agtttttgct tgtattgaat ccgcagcatg
    13261 atgccatagt tcttaaccag catttccatg ccagggatgc gtaaataaca aagcgcagac
    13321 cagggggcat cacgcaacgc gcaattcagg gcgcgaacat ttggcagatg aaccaccggg
    13381 tccacatacg caagccgctg aatgcgtctg actaccgctc tctgacgggt tgccagtaca
    13441 gccatataat tgacaataaa agagaatacc agataactgg aggaggttat ggtcagctgc
    13501 gtggtatagc taggataaat gggaatgtaa ttttgatagc tgtggatgct gatcatcaac
    13561 acgaccgccc agagcagaga aatcagctta taaccatagc gcatcgctcc ccacatcatc
    13621 aggggcagca ataatgataa ggtataattg gtgctaaaaa ttgtgctttt ttcatttaac
    13681 ggcatgcata acagcaacaa taaagcacct aatgccagta gccagagcgc gaactctttt
    13741 ttggtgactt tggcatcaac ctgctgtttt aattgcgaat aatagctacg taaataaaat
    13801 ggatttcgca ctacccgaat gatgaagtag cacagcggga caccgatcag attacccacc
    13861 agtaaggcct gataattgat taaagtcccg aggttaaaag gcatgacacc gaccagattt
    13921 tctctgctcg ccagtaatcc tacaaatgca gcaaactgga aaagtatcag aaacagcgtt
    13981 gcaggaaaca caatctgcca gaatatacgc tgggaaatta aacgggtatc accatgtgaa
    14041 acgttgttac gccggggagt aaagaccctg taaccgcccc aacagagaat gataatgata
    14101 ataaaattag ccgttaatga tagcgtttcg taaaaaccca gctctgcata tttgcggaca
    14161 aaaatcccta aggcgatccc tggcaatgcc gcccagctga aaaacatcat catgctgatc
    14221 atcagtgcca gaggcagata aaagagaaaa acctcaccgg aagaaatatg cgcgaaagta
    14281 ttaatgtggg cgaaaatggg caagattaaa aaaggcagga atagcggaag cccccaccat
    14341 ttatcacgta tttttatata agttgcattc agtttcatag atgctca
//
LOCUS       DADMHC010000098        14075 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.098, whole genome shotgun sequence.
ACCESSION   DADMHC010000098 DADMHC010000000
VERSION     DADMHC010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14075)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14075)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14075
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.098"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..2044)
                     /locus_tag="JNZ57_002422"
     CDS             complement(<1..2044)
                     /locus_tag="JNZ57_002422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001591423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HAY8828619.1"
                     /translation="MSQLDDTILDALTHVTFPKGFAQAEPAWVVTVDGVNYPLWQTDA
                     LVVGSGAARLRAAVELKRRQQNVLIATAGLYMGTSACSGSDKQTLFTAATAGNGDNFT
                     KLAEALASGGAMDHDTAYVEAVGSLHTLGGLQYLGLELPEDRYGAILRYQTDHDEAGR
                     ATSCGPRTSRLMVKVLLEEVQRLAIPVLTSATVIKLLHQRDENGEDRVAGAILATGHR
                     AHNPWGLAIVTAPNVVLATGGPGELYRDSVYPHKCFGSLGLALEEGLTLTNLTESQFG
                     IGTPRSTFPWNLSGTYVQVIPYIYSVDAEGNEYNFLADYYRTTQELASNIFRKGYQWP
                     FHATRVMDFGSSLLDMAVAQEQQSGRQVFMDFNRNPEAVPGDLPFSLDRLDDDVRAYL
                     ENNDALAPSPIERLQRMNPLSISLYKMHGYDLTTQPLQFAMNNQHMNGCIEVDIWGQT
                     SLPGCFAVGEVAGTHGVTRPGGAALNAGQVFAVRLARFIGCTQKRSVEGDVAQLVASS
                     LNIVREVIAQALANENGMALVTVKDKIQARMSDYAGFICHADKVRHATRDALLLSEFV
                     QQHGLTINHAGEIAELFMWRHMTLTSAAVLTQLTHYIDAGGGSRGARMVIDPQGKCLP
                     QTRRGAKEEWRFRSERAEDKNHRLTIQYSQGSFITEVKSLRMQPCINGIYFEKNWPD"
     gene            complement(2041..3582)
                     /locus_tag="JNZ57_002423"
     CDS             complement(2041..3582)
                     /locus_tag="JNZ57_002423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001226973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl CoA:acetate/3-ketoacid CoA transferase"
                     /protein_id="HAY8828620.1"
                     /translation="MRKITTAEALAAQIQDGATIAISGNGGGMVEADHILAAIEARFL
                     QTGHPRDLTLIHSLGIGDRDCKGTNRFAHAEMLKRIIAGHFTWSPKMQALVKNNTIEA
                     YCFPGGVIQALLREIGSGRPGLFTHVGLGSFVDPRNGGGKSNECTTDDLVELIEIDGE
                     TKLRYRPFKVDYAILRGTYADPRGNVSLEEEAIDMDSYSMALAAHNSGGKVFVQVRDV
                     LEAGAIEPRRVKLPGILVDGIVEHRKQPQTYLGGYDLTISGQHRRLSSNDAIELVSHP
                     VRRLIARRAARELVAGASTNFGFGIPGGVPGVALREGVPYQSLWLSVEQGVHNGMMLD
                     DAFFGCARNADAIIPSLDQFEFYSGGGIDITFLGMGEMDQYGNVNVSHLNGNLIGPGG
                     FLEIAQNARKVVFCGTFDAKGSKIDITPDGLHIAQSGQIPKLVTKVEKITFSAAYAQQ
                     SGQEVLYITERAVFQLTAEGVELIEIAPGVEIERDILPYMAFRPIIKHPRLMESSLFT
                     PMEDA"
     gene            complement(3592..4368)
                     /locus_tag="JNZ57_002424"
     CDS             complement(3592..4368)
                     /locus_tag="JNZ57_002424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001283531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HAY8828621.1"
                     /translation="MSDQPVLFSRVAASCRLTLNREDKCHAINEEVIESLDHYLNEIE
                     NDTTLRLVELTATGDKFFCAGGDIKSWSAYSPLDMGRKWIKRGNDVFNRLRNIPQLTV
                     ANLNGHTIGGGIELALCCDIRIARPGAKFSNPEVMLGMVPGWMGIERVLNQVGPVVGR
                     QMLMLGKRLTAQEAQAANLIDEVVEKEQVESWMANQLAQLEKCGPVALAHIKQLILAL
                     ENKHADYPHQLLAGLMSATQDCQQATRAFAEKSSVSFHNQ"
     gene            complement(4378..5219)
                     /locus_tag="JNZ57_002425"
                     /pseudo
     CDS             complement(4378..5219)
                     /locus_tag="JNZ57_002425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001205218.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
     gene            complement(5229..6020)
                     /locus_tag="JNZ57_002426"
     CDS             complement(5229..6020)
                     /locus_tag="JNZ57_002426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709993.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-ketoacyl-ACP reductase"
                     /protein_id="HAY8828622.1"
                     /translation="MKSTRPVAVITGAARGIGKGCAQELARGGFNLLINDRPDADSVE
                     KLHITQQECLAEGVEVICFPADVGDLSLHEEMLDAAQNQWGRLECLLNNAGISVKKRG
                     DLLDLEPDSFDQNIAINTRAPFFLAQAFSKRLLAQPKPEAELPHRSIIFVSSINAIML
                     AMNRGEYTIAKTAVSAAARLFAARLCNEQIGVYEVRPGLIKTDMTIPATAYYDELIAK
                     GLVPWGRWGYPADIASTVRAMAEGKLIYTCGQAVAIDGGLSMPRF"
     gene            6232..6879
                     /locus_tag="JNZ57_002427"
     CDS             6232..6879
                     /locus_tag="JNZ57_002427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709992.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HAY8828623.1"
                     /translation="MYLDTSNVQSLKEKLLLCAVNEFAEYGYEGARVDNIVKAAGCSK
                     QTVYHHFGNKENLFIEVLEYTWNDIRQKEKALDFSDLLPQKAIEKIIDFTWDYYIANP
                     WFLKIVHSENQSKGVHYAKSQRLLEINHAHLQLMESLLDEGKKHNIFKPDIDPLQVNI
                     NIAALGGYYLINQHTLGLVYHISMVSPQALEARRKVIKETILSWLLVDPSSTAHE"
     gene            complement(6863..7501)
                     /gene="ytfB"
                     /locus_tag="JNZ57_002428"
     CDS             complement(6863..7501)
                     /gene="ytfB"
                     /locus_tag="JNZ57_002428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein YtfB"
                     /protein_id="HAY8828624.1"
                     /translation="MPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVV
                     GFLLPSDDTPNAPVVTREAQLDIQSQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQ
                     EGQPEEQPQTTQTQPFQPDSGIDNQWRSYRVEPGKTMAQLFHDHGLPATDVYAMAQVE
                     GAGKPLSNLQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR"
     gene            7720..8340
                     /locus_tag="JNZ57_002429"
     CDS             7720..8340
                     /locus_tag="JNZ57_002429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313212.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HAY8828625.1"
                     /translation="MTTPTFDTIEAQASYGIGLQVGQQLSESGLEGLLPEALVAGIAD
                     ALEGKHPAVPVDVVHRALREIHERADAVRRQRFQAMAAEGVKYLEENAKKEGVNSTES
                     GLQFRVINQGEGAIPARTDRVRVHYTGKLIDGTVFDSSVARGEPAEFPVNGVIPGWIE
                     ALTLMPVGSKWELTIPQELAYGERGAGASIPPFSTLVFEVELLEIL"
     gene            8649..10061
                     /gene="cycA"
                     /locus_tag="JNZ57_002430"
                     /gene_synonym="dagA"
     CDS             8649..10061
                     /gene="cycA"
                     /locus_tag="JNZ57_002430"
                     /gene_synonym="dagA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine/D-alanine/glycine transporter"
                     /protein_id="HAY8828626.1"
                     /translation="MVDQVKVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMG
                     SGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYF
                     TGWTYWFCWVVTGMADVVAITAYAQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEM
                     EFWFAMIKIVAIVSLIVVGLVMVAMHFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGF
                     QIAVFAFVGVELVGTTAAETKDPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSV
                     VPEKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA
                     FAKLSKRAVPAKGLTFSCICLLGGVVMQYVNPSVIGAFTMITTVSAILFMFVWTIILC
                     SYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAFFVFVVVLLTLEDDTRQALLVTPLWF
                     IALGLGWLFIGKKRAAELRK"
     gene            complement(10106..10768)
                     /gene="ytfE"
                     /locus_tag="JNZ57_002431"
     CDS             complement(10106..10768)
                     /gene="ytfE"
                     /locus_tag="JNZ57_002431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair protein YtfE"
                     /protein_id="HAY8828627.1"
                     /translation="MAYRDQPLGELALSIPRASALFRKYDMDYCCGGKQTLARAAARK
                     ELDVEVIEAELAKLAEQPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPELILQATKVE
                     RVHADKPSVPKGLTKYLTMLHEELSSHMMKEEQILFPMIKQGMGSQAMGPISVMESEH
                     DEAGELLEVIKHTTNNVTPPPEACTTWKAMYNGINELIDDLMDHISLENNVLFPRALA
                     GE"
     gene            complement(10876..11841)
                     /locus_tag="JNZ57_002432"
     CDS             complement(10876..11841)
                     /locus_tag="JNZ57_002432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418631.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HAY8828628.1"
                     /translation="MISGVLYALLAGLMWGLIFVGPLIVPEYPAMLQSMGRYLALGLI
                     ALPIAWLGRVRLRQLARRDWLTALMLTMMGNLIYYFCLASAIQRTGAPVSTMIIGTLP
                     VVIPVFANLLYSQRDGKLVWGKLAPALVCIGIGLACVNIAELNHGLPDFDWARYTSGI
                     VLALVSVVCWAWYALRNARWLRENPDKHPMMWATAQALVTLPVSLIGYLVACYWLNTQ
                     TPDFSLPFGPRPLVFISLMVAIAVLCSWVGALCWNVASQRLPTVILGPLIVFETLAGL
                     LYTFLIRQQMPPLMTLSGIALLVVGVVIAVRAKPEKPLTESVSES"
     gene            complement(11949..12809)
                     /gene="qorB"
                     /locus_tag="JNZ57_002433"
     CDS             complement(11949..12809)
                     /gene="qorB"
                     /locus_tag="JNZ57_002433"
                     /EC_number="1.6.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H:quinone oxidoreductase"
                     /protein_id="HAY8828629.1"
                     /translation="MIAITGATGQLGHYIIESLMKTVPASQIVAIVRNPAKAQALAAQ
                     GITVRQADYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVRFIAYT
                     SLLHADTSPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGA
                     AGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLATELTKQSGKQVT
                     YQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDNSKTLSKLIGRPTTTLAE
                     SVSHLFNVNN"
     gene            12898..13278
                     /locus_tag="JNZ57_002434"
     CDS             12898..13278
                     /locus_tag="JNZ57_002434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HAY8828630.1"
                     /translation="MSQVSLSQQLKEGNLFAEQCPSREVLKHVTSRWGVLILVALREG
                     THRFSDLRRKIGGVSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEYSLTPLGEQVSEK
                     VAALADWIELNLPEVLAVRDERAA"
     gene            complement(13407..>14075)
                     /gene="cpdB"
                     /locus_tag="JNZ57_002435"
     CDS             complement(13407..>14075)
                     /gene="cpdB"
                     /locus_tag="JNZ57_002435"
                     /EC_number="3.1.3.6"
                     /EC_number="3.1.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418634.1"
                     /note="periplasmic enzyme; functions during ribonucleic
                     acid degradation; 2',3'-cyclic nucleotides are first
                     converted to 3'-nucleotide and then cleaved to yield a
                     ribonucleotide and a phosphate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2',3'-cyclic-nucleotide 2'-phosphodiesterase"
                     /protein_id="HAY8828631.1"
                     /translation="KGQLTFRNAADLYLYPNTLIVVKASGKEVKEWLECSAGQFNQID
                     PNSTKPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYDGECQMINANAERIKNLTFN
                     GKPIDPNAMFLVATNNYRAYGGKFAGTGDSHIAFASPDENRSVLAARIADESKRAGEI
                     HPAADNNWRLAPIAGDKKLDIRFETSPSDKAAAFIKEKGQYPMNKVATDDIGFAIYQV
                     DLSK"
BASE COUNT         3281 a         3651 c         3630 g         3513 t
ORIGIN      
        1 agtctggcca gtttttttca aagtaaatac cgttaataca cggttgcata cgtaaagact
       61 tcacttcggt aataaaagaa ccttgcgaat attgaatcgt taatctgtga tttttgtctt
      121 cagcacgttc agagcgaaaa cgccattctt cttttgcgcc gcgacgagtt tgtgggaggc
      181 atttgccttg tggatcaata accatccgtg ctccacgact gcctccacct gcgtcaatat
      241 aatgcgtcaa ttgcgttaat acggcggcag aagtcagcgt catatgccgc cacataaaca
      301 gttcggcaat ttcgcctgcg tgattgatgg ttaaaccgtg ttgttgtaca aactcactta
      361 gcagcagggc gtcacgggtg gcatgacgaa ctttatcggc atgacaaata aatccggcgt
      421 aatcagacat tcgcgcctgg attttgtctt tcaccgttac cagcgccatt ccgttctcgt
      481 ttgccagtgc ctgagcgata acttctctga ctatattcag agatgaggct accagctgcg
      541 cgacatcacc ctcaacagac cgcttttgcg tgcaaccaat aaaacgtgcc agacgaacag
      601 caaaaacctg cccggcattc aatgctgcac cacctgggcg agtgacgccg tgtgtgccag
      661 caacttcccc cacggcgaaa cagccgggca gggaggtttg tccccagata tccacttcaa
      721 tgcagccatt catatgctga ttattcatgg caaactgcaa aggctgtgtg gtgagatcgt
      781 aaccgtgcat cttatacagc gagatagaca gcggattcat tcgttgcagc cgttcgatgg
      841 gcgatggtgc cagagcgtcg ttattttcca gatacgcgcg aacgtcgtcg tccagtcgat
      901 ctaatgagaa cggcaggtca cccggcaccg cttcaggatt gcgattgaaa tccataaata
      961 cctgacgccc tgattgctgc tcttgcgcta ctgccatatc taacaagctg gagccaaaat
     1021 ccatcacccg agtggcgtgg aacggccact gatagccttt acggaaaatg tttgaagcca
     1081 gctcctgggt ggtgcgatag taatccgcga ggaagttata ctcgttaccc tcagcatcca
     1141 cggaatagat atacgggatc acctgtacat aggtgccgga taaattccac ggaaacgtgc
     1201 tacgcggcgt gcctatacca aactggcttt cggtcagatt ggttagcgtc agaccttcct
     1261 ccagcgccag ccccagcgag ccgaagcatt tatgtggata aacactgtcg cgataaagct
     1321 cgcccggtcc gcccgttgcc agtaccacat tgggcgcagt cacaattgcc agcccccatg
     1381 ggttatgggc gcgatgaccg gtcgcgagga ttgcccctgc cacgcggtct tcgccgtttt
     1441 cgtcacgctg atgcagcagt ttaatcactg ttgcactggt caacactgga atggcgaggc
     1501 gctgtacttc ttccaacagc actttcacca ttaaccttga ggtacgcggc ccacacgagg
     1561 ttgcacgccc ggcttcgtca tggtcggttt gataacgaag aatcgcgcca tagcgatctt
     1621 ccggtaattc cagaccaaga tattgcaacc cgcctagagt gtgcagagaa cctaccgctt
     1681 cgacataagc ggtgtcgtga tccatcgccc caccgctcgc cagtgcctct gccagtttgg
     1741 tgaagttgtc gccgttgccc gcggtagcgg cggtaaatag tgtctgttta tcggaaccag
     1801 aacatgccga cgtccccata tataacccgg cggtagcgat cagcacattt tgctggcggc
     1861 gtttaagttc aactgccgca cgtaatcttg ctgcaccact gccgactacc agggcatctg
     1921 tttgccagag tgggtaatta acaccgtcta ccgtgacaac ccatgcgggc tctgcctgtg
     1981 caaaaccctt tgggaaagta acgtgcgtca gcgcatcaag gatggtgtca tcaagctgac
     2041 tcatgcatcc tccatcggcg taaacaggct actttccatc aggcgtgggt gcttgataat
     2101 tggacggaaa gccatatacg gcagaatgtc gcgctcaatc tccacacccg gcgcgatttc
     2161 aattaattca acgccttctg ccgttaactg gaatactgcg cgttcagtga tatacaacac
     2221 ttcctgacca ctttgctgtg cgtaggcggc gctaaaagtg attttttcca ccttggtaac
     2281 cagtttaggg atttgacctg actgggcgat atgcaagcca tctggtgtta tatcgatctt
     2341 gctgccttta gcgtcgaacg tgccgcagaa caccacttta cgggcatttt gcgcaatttc
     2401 gagaaatccg ccggggccaa tcagattgcc attgagatgg gagacgttga cgttaccgta
     2461 ctgatccatc tctcccatgc cgaggaaggt gatatcgatc cctccgccac tgtagaactc
     2521 aaattgatcg agtgatggaa taatggcatc ggcgttgcgg gcgcagccga aaaacgcatc
     2581 atccagcatc atgccgttat gtacgccttg ctcgacgctc agccataaac tttggtaagg
     2641 aacgccttcg cgcagcgcta ctcctggaac gccgccggga ataccaaagc caaagttggt
     2701 tgaagcgcca gctaccagtt cgcgtgctgc ccgacgggca atcaggcgac gtaccggatg
     2761 actaaccagt tcaatagcgt cgttagaact cagacggcga tgttggccgc tgatggtcag
     2821 gtcgtaaccg ccaagatagg tttgtggctg tttgcggtgt tcaacgatgc catcaaccag
     2881 aatgcccggt aatttgactc ggcgtggttc aatcgcgcca gcttccagca catcgcgtac
     2941 ctgtacgaac actttgccgc cgctgttgtg tgctgccagc gccatggaat agctatccat
     3001 atcaatcgct tcttcttcaa ggctgacgtt gcctcgagga tcggcataag tgccacgcaa
     3061 aatcgcgtaa tccactttga aagggcgata acgaagtttg gtttcaccgt cgatttcaat
     3121 cagttctacc aggtcgtcgg tagtgcattc attcgactta ccgccgccat tgcgtggatc
     3181 aacaaacgat cccagcccaa cgtgggtaaa aagccccgga cgtccggagc cgatctcccg
     3241 tagcagtgcc tgaatcacgc caccaggaaa gcagtaggct tcaatcgtgt tattttttac
     3301 cagcgcctgc attttgggcg accaggtaaa gtgcccggca ataatgcgtt tgagcatctc
     3361 tgcgtgcgca aaacggttag tgcctttgca gtcgcgatcg ccaataccca gcgagtggat
     3421 tagcgtcagg tcgcgagggt gtccggtttg caggaaacgc gcttcaatag cagccagaat
     3481 atggtcggct tctaccatac cgccgccgtt accgctaata gcaatagtcg caccgtcctg
     3541 aatttgcgcc gccagtgcct cggcggttgt tatcttacgc atacaatttc cttattgatt
     3601 atggaagctc acgctacttt tttcggcaaa ggcgcgcgtc gcctgctggc aatcctgagt
     3661 ggcggacatt aatccggcca gtagctggtg cgggtaatcg gcatgtttat tttccagtgc
     3721 cagaatcagt tgcttaatat gcgccagtgc caccggaccg catttttcca gctgcgctaa
     3781 ctggttcgcc atccagcttt ccacctgttc tttttctacc acttcatcaa ttaaattcgc
     3841 cgcctgagct tcctgcgccg tcaggcgttt acccagcatc agcatctggc gaccgaccac
     3901 cggaccgacc tgattaagca cacgttcaat gcccatccag ccaggcacca tgccgagcat
     3961 cacttccggg ttagagaatt tcgcgccggg gcgggcaata cgaatatcgc agcacaaggc
     4021 cagttcaata ccaccgccga tggtatgacc gttgagattc gcaacggtta attggggtat
     4081 gtttcgcagg cgattaaaaa cgtcattacc gcgtttaatc cattttctgc ccatatctaa
     4141 tggcgaatag gccgaccacg atttaatatc gccgcccgca caaaagaatt tatcgccggt
     4201 tgccgttaat tcgactaatc gtaatgtggt gtcgttttca atttcattta aataatggtc
     4261 gagagattcg atcacctctt cgttaatagc atgacattta tcttcacggt tcaatgtcag
     4321 gcggcaggaa gccgccactc tgctgaacag aacgggttgg tcactcatga tcattcctta
     4381 acaataatgc gcgatgcgat cgacgctaat atccagcgtg ctgttaatat ctttctgcca
     4441 ccagtaaggc gagaatattt ccagttcaat agcaccatta aatccggcgt tttcaaccag
     4501 ccgacgaatt gacggaatat tgatgacgcc atctcccggc ataccacggt cattgaccag
     4561 atcagtggtc ggcactaacc agtcggaaac atgaaacgcg aggatgcgtt ttccggcacg
     4621 caggatctga ctggcgagat ccggatccca ccagacgtga taaacatcca ccgccacgcc
     4681 gaggccaaac tcaccatcgg gatcgagttc atcacaccag tccagcgcct gacgtaacgt
     4741 gcacaggcaa gagcgatcgg cagctgtcat cgggtgcagt ggctccagcg caattggcac
     4801 gccgacatct ttcgaatgtg gcagcaactg gcgaatccct tgtttcactt gttctcgcgc
     4861 ttcatataga tctttagtgc ccgttggcag accgccaacc acctgcatat aacaggcggc
     4921 gttaagcacc gctgcgtcgt ccagcgcccg gcggttatca tcaatcgcca gtttgcgttc
     4981 cgccagtgtc ggcgcggtgt agtaagtgct acggcacaaa ccggaaacgc tcatgttact
     5041 ggcggcaagc tggcgggtga tttgctggag atcttcaccc tgcaactccc tgcgccaggg
     5101 gcaattgcgc caataccgcg tgcggcgcag gcatcaataa tggcgggtag cggcgtttta
     5161 tagcccagtg tcgcggtatt gatactgaat aaatccgggc gttgtaacag atctctcatg
     5221 attcagcctc agaagcgcgg catacttaag ccgccgtcga tggcgaccgc ctgaccacag
     5281 gtgtaaatca gtttaccttc cgccattgcg cggacggtgg aagcaatatc agccggataa
     5341 ccccaacgtc cccacggcac cagacctttg gcaatcagtt cgtcgtaata agccgttgcc
     5401 ggaatagtca tatcagtttt gatgagacca gggcgcactt cataaacgcc aatttgttca
     5461 ttacaaaggc gagcagcaaa cagacgagca gcggcagaaa cggcggtttt ggcaatggtg
     5521 tattcgccgc gattcatcgc cagcatgatg gcgttgatgg aactgacgaa aataatcgag
     5581 cggtgcggca gctccgcttc cggtttcggc tgtgccagta agcgcttact gaatgcctga
     5641 gcaaggaaga acggcgcgcg ggtgttaatg gcaatgtttt gatcgaagct gtctggttcg
     5701 aggtcgagga ggtcaccgcg ttttttcact gaaatccccg cgttattgag cagacactcc
     5761 agccgccccc actggttttg cgccgcgtcg agcatctcct catgcagaga tagatcaccg
     5821 acatcagcag ggaagcaaat cacttccacg ccttccgcca aacattcttg ttgtgtgata
     5881 tgcagttttt ctacgctgtc ggcatcggga cgatcgttaa tcagcaggtt aaacccgcca
     5941 cgagcaagct cctgcgcaca gccctttcca ataccgcgag cggctccggt aatcacggca
     6001 acaggacgag tggatttcat acaatagctc tcttttttga attttgtttc cttggtgatg
     6061 attagcttgc gactggagga taaaaagatc aaccatctag ttggttgata tgcgatgacg
     6121 atcacaggac atttgataac ctgatgaaag tacaagtttt tgcccttttt tctgaagctg
     6181 aaatcaaatc aggttatgat agtcaccacg aagaggtcgt ggggaagcgt tatgtatctt
     6241 gataccagca acgtacagag cctgaaggaa aagctgctgt tatgcgcggt taatgaattt
     6301 gccgaatatg gttatgaagg ggccagggtc gataatattg ttaaggctgc ggggtgtagt
     6361 aaacagacgg tttatcatca ctttggtaat aaagaaaatt tatttattga agtactggaa
     6421 tatacctgga acgatattcg acaaaaagaa aaggcccttg atttctcaga tcttctgcca
     6481 caaaaggcta ttgagaaaat tattgatttt acatgggatt attatattgc taacccctgg
     6541 tttttaaaaa ttgtgcatag tgaaaatcaa agtaaaggtg tgcattatgc aaaatcacag
     6601 cgtctcttag aaattaacca tgcgcacttg cagttaatgg aatccttatt ggatgaaggg
     6661 aagaaacaca atatttttaa gccagatatc gacccattgc aggtgaatat taatattgct
     6721 gcgcttggcg gatattattt gatcaaccag catacgcttg gcctggttta tcatatcagt
     6781 atggtttccc cccaggcact ggaagccaga cgtaaggtca tcaaagagac aatccttagc
     6841 tggcttttgg ttgacccttc atctaccgcg cacgaataaa actgccatcc ggctggcggg
     6901 tgaacaggac ctgttgatta ttccccgtat caatggttaa gcccgtcacc acgccgctgg
     6961 cgttctggcg gattttcacc atctgcccgt tttgcaaatt actcagcggc ttacccgcgc
     7021 cttctacctg cgccattgca tagacatcgg tagcgggcag tccgtggtcg tggaacagct
     7081 gcgccatcgt tttaccgggt tcgacacggt aagagcgcca ttgattatca attccgctat
     7141 ctggctggaa tggttgcgtt tgggtagttt gcggctgctc ttctggctgg ccttcctgta
     7201 taggttctgg agcgaccgga gccacctgat caggatcatt ttgtggtgtg actaattgcg
     7261 cccgcagctg ttcttctgtc ggcggttgtg attgcgactg aatatctaac tgcgcttcac
     7321 gcgtcacgac cggcgcgttg ggcgtatcat cagatggaag cagaaatccg accaccaata
     7381 caatggcggc aataatgatc ccccgacgat gcatcggcgg cagcgggtcc atgaagcgaa
     7441 aattgtccgg cgcgtgccag actttctcca gggttggttt tagttcaaag cgcccgggca
     7501 tggtttcctc ctgctccgcg tcttgttcct caatcatagc ctatgaataa gctaacgcta
     7561 tgatgtccgt ggtaaacccg cctttattat attcatacgg gatattgcta ttgtttcttt
     7621 ttccccggga tttgtcatca ttcctgcgac aaagttttac ccaaagaagt gtggctgata
     7681 tgctgcccgc tacttttata ccctaagaaa ggaaatacga tgaccacccc aacttttgac
     7741 accatcgaag cgcaagcaag ctacggcatt ggtttgcagg tagggcaaca actgagtgaa
     7801 tctggcctgg aagggctgct gccagaagca ctggttgcag gtattgccga tgcgctggaa
     7861 ggcaaacatc cggctgttcc ggttgatgtg gtgcatcgcg cgctgcgtga aatccacgaa
     7921 cgcgccgatg ccgttcgtcg tcagcgtttc caggcgatgg ctgctgaagg tgtgaaatac
     7981 ctggaagaaa acgccaaaaa agaaggtgtg aatagcaccg aatctggcct gcaattccgc
     8041 gtgatcaacc agggtgaagg cgcaattccg gcacgtaccg accgcgttcg tgttcattac
     8101 accggtaaac tgatcgacgg caccgtgttt gacagctccg ttgctcgtgg tgaacccgct
     8161 gaattcccgg ttaacggcgt gatccctggc tggattgaag cactgactct gatgccggta
     8221 ggttctaaat gggaactgac tatcccgcag gaactggcat atggcgagcg cggcgcaggt
     8281 gcatccatcc ctccgttcag caccctggtg tttgaagtcg aactgctgga aatcctctaa
     8341 gcagcgcatt ctgttcccct cgaaccagag gggagcaggc attcagcaat aaacccttca
     8401 gtttgccaaa cggcgctatt ttgtgttgca aagaccccgt aagcgtgtat ttttgtgagc
     8461 tgtttcgcgt tatcaccgtg atatgacact cactttaaac ataaaattaa cattagatct
     8521 aaatcttagt attcatcccg cgtattgtta cctaatatcg atgagtcccg atacagattc
     8581 gtcgtatcat agactgacta aaggccgtag agcctgaaca acacagacag gtacaggaag
     8641 aaaaaaacat ggtagatcag gtaaaagtcg ttgccgatga tcaggctccg gctgaacagt
     8701 cgctacggcg caatctcaca aaccgacata ttcagcttat tgccattggc ggtgccattg
     8761 gtacggggtt gtttatgggg tctggcaaaa cgattagcct tgccgggccg tcgatcattt
     8821 tcgtttatat gatcattggt tttatgctct ttttcgtgat gcgggcaatg ggggaattgc
     8881 tgctttcgaa tctggaatac aaatctttta gtgacttcgc ttccgattta ctcgggccgt
     8941 gggcaggata tttcactggc tggacttact ggttctgctg ggttgtaacc ggtatggcag
     9001 acgtggtggc gatcacggct tatgctcagt tctggttccc cgatctctcc gactgggtcg
     9061 cctcgctggc ggtgatagtg ctgctgctga cgctcaacct tgccaccgtg aaaatgttcg
     9121 gtgagatgga gttctggttt gcgatgatca aaatcgtcgc catcgtgtcg ctgattgtcg
     9181 tcggcctggt catggtggcg atgcactttc agtcaccgac tggtgtggaa gcgtcattcg
     9241 cgcatttgtg gaatgacggc ggctggttcc cgaaaggttt aagtggcttc tttgccggat
     9301 tccagatagc ggttttcgct ttcgtggggg ttgagctggt aggtacaaca gctgcggaaa
     9361 ccaaagatcc ggagaaatca ctgccacgcg cgattaactc cattccgatc cgtatcatta
     9421 tgttctacgt cttcgcgctg attgtgatta tgtccgtaac accgtggagt tcggtagtcc
     9481 cggagaaaag cccgttcgtt gagctgtttg tgttggtagg tttgcctgcg gctgccagcg
     9541 tgatcaactt tgtggtgctg acctctgcgg cgtcttccgc taacagcggc gtcttctcta
     9601 ccagccgtat gctgtttggt ctggcgcagg aaggtgtggc accgaaagcg ttcgctaaac
     9661 tttctaagcg cgcagtacca gcgaaagggc tgaccttctc ctgcatctgc ctgctcggtg
     9721 gcgtggtgat gcagtatgtg aatcctagcg tgattggtgc gttcacgatg attacaaccg
     9781 tttccgcgat tctgtttatg ttcgtctgga cgattatcct ttgctcgtac ctggtgtacc
     9841 gcaaacagcg tcctcatctg catgagaagt cgatctacaa gatgccgctc ggcaagctga
     9901 tgtgctgggt atgtatggcg ttctttgtgt tcgtggtcgt gttgctgaca ctggaagatg
     9961 acactcgcca ggcgctgctg gttaccccgc tgtggtttat cgcactgggg ctgggctggt
    10021 tgtttattgg taagaagcgg gctgctgaac tgcggaaata accgcattat catgctggat
    10081 ggcgcaatgc catccagctt ttagatcact cacccgccag cgcgcgtggg aacagtacat
    10141 tgttttccag actgatgtga tccatcaggt catcaatcag ttcattaatg ccgttataca
    10201 tcgctttcca ggtggtgcag gcttctggcg gcggtgtgac gttattggta gtgtgtttga
    10261 tcacttccag cagttcgccc gcttcatcgt gctcgctttc cattacgctg attggcccca
    10321 ttgcctggct gcccatgcct tgtttgatca tcgggaagag gatctgctct tctttcatca
    10381 tgtggctgga aagctcttca tgcagcatgg tcaggtattt tgtcagccct tttggcacgc
    10441 tcggtttgtc ggcgtgaacg cgctcgactt tagtcgcttg caggatcagc tccggcagtt
    10501 gctcgcggtg acgatcgtgg tagcgcacga tgatatggtc aatgatttct gccagcgggg
    10561 cgctacgcca gtctttctca atcggttgtt cagcaagctt tgccagttca gcttcaatga
    10621 cctcaacatc cagttcttta cgtgccgccg cgcgcgccag cgtctgctta ccgccacagc
    10681 agtaatccat atcatattta cgaaacagag ctgaagcgcg aggaatagag agcgccagtt
    10741 cacctaaagg ttggtcgcga taagccatag ctgatacctc attcttaata agataagatg
    10801 tattttaaat acatctttaa ggcaaaagct ataaccctta cgtagcagag gcttatttaa
    10861 ctcacagcca gtatgtcaac tttctgagac agattcagtt aaaggctttt ccggttttgc
    10921 tctgactgca atgaccacgc caaccactaa cagcgcgata ccgctcagcg tcatcagcgg
    10981 cggcatttgc tggcgtatca aaaaggtgta cagcaaacct gccagtgttt cgaaaacgat
    11041 cagcggcccg agaatcactg tcggtaatcg ctggctggcg acgttccagc agagtgcgcc
    11101 aacccatgag caaagcacgg ctatcgcaac catcagacta ataaacacca gcggacgggg
    11161 gccaaaaggt agggagaagt ccggcgtttg cgtattcagc cagtaacagg ctacgagata
    11221 gccgatgaga gaaaccggca gtgtgaccag cgcctgcgcc gtcgcccaca tcatcggatg
    11281 tttgtcggga ttctcccgca gccagcgggc gttgcgcagg gcataccatg cccagcagac
    11341 cacggaaact aacgctagca cgatgcctga ggtataacgt gcccagtcaa aatcggggag
    11401 tccgtggttt aactcagcaa tattcacaca cgccaggccg atgccaatac aaaccagtgc
    11461 cggggcgagt tttccccaca cgagtttgcc gtcgcgctgg ctataaagca gattggcaaa
    11521 aacgggaatc accaccggca gggtgccgat aatcatcgtg gaaacaggcg caccagtacg
    11581 ttgaatggca ctggcaaggc agaagtaata gatgaggttg cccatcattg tgagcatcaa
    11641 ggcggtaagc cagtcgcgac gcgccaactg acgcagacgc acgcgtccca gccaggcaat
    11701 gggcagcgca attaacccta acgccagata acgccccatc gactgcaaca tcgccgggta
    11761 ttccggtacg atcaacggcc cgacaaaaat aagcccccac atcaaccctg ctaacagggc
    11821 gtacagcacg ccgctaatca ttactggcat ccattggtct gtcagaagaa agttcaggaa
    11881 gcagacatga ttgctcccgg catcccgtca ttattagaga ggatgcggga ggatgccact
    11941 ttaattaact agttattaac attaaaaaga tggcttacgc tttcggctaa cgttgtcgtt
    12001 gggcggccaa tcaatttgct aagcgttttg ctgttatcaa acagaccacc tttcgatgcg
    12061 ccaacgtcag aatccgccag catatccgcc agtccgtcgg gcagtccgac gcttttcagt
    12121 gccgcggcga aatcggcttc gctcagattt tgataggtaa cctgtttgcc gctctgtttg
    12181 gtcagctctg tcgctaactg tgtcaacgtc caggcactat cgcccgccag ttcgtaaacc
    12241 ttgccttcgt gaccggcttc gctaatcacg cgtgccgcag ctgccgcata atctgcccgc
    12301 gttgctgagg cgattttgcc atcgcccgcc gcaccgataa atacgccgtg ttccagtgct
    12361 gccggggcgc tggcgaggta gttttcgctg taccagccgt tgcgcagcag ggtgtaaacg
    12421 atgccagaat cagccaacat tttctccgtc tcaatgtgct catcggcgag gccgagcggg
    12481 gaggtatctg catgtagcag gctggtataa gcgataaatc tcacgccagc cgcctttgcg
    12541 gcattaataa cattacgatg ctgcggggca cgttgaccca cttcgctgga agagatcagc
    12601 agtagttttt ccactccctg aagtgcagat gtcagtgcgg cttcatcgcc gtagtcagcc
    12661 tgacgcacgg taatgccttg tgctgccaga gcctgggctt ttgccggatt acgaacgata
    12721 gccactattt ggctggcagg aaccgttttc atcaaggatt caataatata gtgaccaagt
    12781 tggccagtgg caccagtaat agcgatcatg ggaagtctcc atcgttttgt cttgtgttta
    12841 aatacgctaa cacctaaact tacttttagt aagtacgtac aaaaaggtaa gtatgaaatg
    12901 agtcaggtta gcctgtcgca acaactgaaa gagggtaatc tctttgcgga acagtgcccg
    12961 tcgcgcgagg tgttgaaaca cgtcaccagc cgttgggggg tgttgattct ggtggcgcta
    13021 cgcgaaggta ctcatcgctt tagcgacctg cggcgcaaaa tcggcggggt gagcgaaaag
    13081 atgcttgcgc agtcgttaca ggcgttagaa caggatggtt ttcttaaccg tatcgcgtat
    13141 ccggtggtgc caccgcatgt ggaatatagc ctcacgccgc tgggcgagca ggtgagcgaa
    13201 aaggttgctg cactggcgga ctggattgag ttgaatttgc ccgaggtgtt ggcggtgcgg
    13261 gatgaacgtg cggcataact gccggatgcg ctgagcttat ctggtctacg gtgcatggct
    13321 tgtagggcgg ataagatgcg ccagcatcgc atccgccaat aaatgccgga tgcggttgat
    13381 aatttataga ccgaaaaaga agtgttttac ttactcaaat ccacctgata aatcgcaaac
    13441 ccgatatcat cggtcgcgac tttattcatc ggatattgcc ctttctcttt aataaacgct
    13501 gcggctttat ctgacgggga agtttcgaaa cggatatcca gtttcttatc gccagctatc
    13561 ggtgctaaac gccagttgtt atctgccgcc gggtgaattt ctcccgcacg tttcgactca
    13621 tcagcaatcc tcgctgccag caccgagcga ttctcatccg gtgaagcaaa agcgatatgg
    13681 ctgtcgcccg taccggcaaa tttgccgccg taagcgcgat agttattggt ggcaacgagg
    13741 aacatagcgt tcggatcaat cggcttgcca ttaaaggtca ggttcttaat ccgctctgca
    13801 ttggcattaa tcatctggca ctcgccgtca tagcgggcgg gttgggtaac atcaatctga
    13861 taattcacac catcaataac atcaaagtta taagtgcgga aaccatccca gttgatgagt
    13921 gactgtggtt tcgtgctgtt aggatcaatc tggttaaact gtccggcgga gcactccagc
    13981 cactctttca cctctttacc gctggctttc actacaatca gcgtattggg gtagagataa
    14041 agatcggcgg cattacggaa ggtcaactgg ccttt
//
LOCUS       DADMHC010000099        14044 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.099, whole genome shotgun sequence.
ACCESSION   DADMHC010000099 DADMHC010000000
VERSION     DADMHC010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14044)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14044)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14044
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.099"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            479..1303
                     /gene="gadX"
                     /locus_tag="JNZ57_002436"
     CDS             479..1303
                     /gene="gadX"
                     /locus_tag="JNZ57_002436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadX"
                     /protein_id="HAY8828632.1"
                     /translation="MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRV
                     DKCVENFVLVSRDTLSLFLPMLKEEALNLHAHKKISSLLVHHCSRDIPVFQEVAQLSQ
                     NKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWT
                     LARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY
                     HSVSYFIYVFRNYYGMTPTEYQERSAQGLPNRDSAASIVAQGNFYGTDRSAEGIRL"
     gene            1671..2399
                     /gene="gadW"
                     /locus_tag="JNZ57_002437"
     CDS             1671..2399
                     /gene="gadW"
                     /locus_tag="JNZ57_002437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadW"
                     /protein_id="HAY8828633.1"
                     /translation="MTHVCSVILIRRSFDIYHEQHKISLHNESIVLLEKNLADDFAFC
                     SPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESG
                     VNSPILSNMLYLSCLSMFSHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAE
                     RMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYF
                     INTFRQYYGVTPHQFAQHSPGTFS"
     gene            complement(2762..5875)
                     /locus_tag="JNZ57_002438"
     CDS             complement(2762..5875)
                     /locus_tag="JNZ57_002438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HAY8828634.1"
                     /translation="MANYFIDRPVFAWVLAIIMMLAGGLAIMNLPVAQYPQIAPPTIT
                     VSATYPGADAQTVEDSVTQVIEQNMNGLDGLMYMSSTSDAAGNASITLTFETGTSPDI
                     AQVQVQNKLQLAMPSLPEAVQQQGISVDKSSSNILMVAAFISDNGSLNQYDIADYVAS
                     NIKDPLSRTAGVGSVQLFGSEYAMRIWLDPQKLNKYNLVPSDVISQIKVQNNQISGGQ
                     LGGMPQAADQQLNASIIVQTRLQTPEEFGKILLKVQQDGSQVLLRDVARVELGAEDYS
                     TVARYNGKPAAGIAIKLATGANALDTSRAVKEELNRLSAYFPASLKTVYPYDTTPFIE
                     ISIQEVFKTLVEAIILVFLVMYLFLQNFRATIIPTIAVPVVILGTFAILSAVGFTINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVIAEDKLPPKEATHKSMGQIQRALVGIAVVLS
                     AVFMPMAFMSGATGEIYRQFSITLISSMLLSVFVAMSLTPALCATILKAAPEGGHKPN
                     ALFARFNTLFEKSTQHYTDSTRSLLRCTGRYMVVYLLICAGMAVLFLRTPTSFLPEED
                     QGVFMTTAQLPSGATMVNTTKVLQQVTDYYLTKEKDNVQSVFTVGGFGFSGQGQNNGL
                     AFISLKPWSERVGEENSVTAIIQRAMIALSSINKAVVFPFNLPAVAELGTASGFDMEL
                     LDNGNLGHEKLTQARNELLSLAAQSPDQVTGVRPNGLEDTPMFKVNVNAAKAEAMGVA
                     LSDINQTISTAFGSSYVNDFLNQGRVKKVYVQAGTPFRMLPDNINQWYVRNASGTMAP
                     LSAYSSTEWTYGSPRLERYNGIPSMEILGEAAAGKSTGDAMKFMADLVAKLPAGVGYS
                     WTGLSYQEALSSNQAPALYAISLVVVFLALAALYESWSIPFSVMLVVPLGVVGALLAT
                     DLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAVEMMQKEGKTPIGAIIEAARMRLRP
                     ILMTSLAFILGVLPLVISHGAGSGAQNAVGTGVMGGMFAATVLAIYFVPVFFVVVEHL
                     FARFKKA"
     gene            complement(5900..7057)
                     /gene="mdtE"
                     /locus_tag="JNZ57_002439"
     CDS             complement(5900..7057)
                     /gene="mdtE"
                     /locus_tag="JNZ57_002439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug transporter subunit MdtE"
                     /protein_id="HAY8828635.1"
                     /translation="MNRRRKLLIPLLFCGAMLTACDDKSAENAAAMTSEVGVVTLSPG
                     SVNVLSELPGRTVPYEVAEIRPQVGGIIIKRNFIEGDKVNQGDSLYQIDPAPLQAELN
                     SAKGSLAKALSTASNARITFNRQASLLKTNYVSRQDYDTARTQLNEAEANVTVAKAAV
                     EQATINLQYANVTSPITGVSGKSSVTVGALVTANQADSLVTVQRLDPIYVDLTQSVQD
                     FLRMKEEVASGQIKQVQGSTPVQLNLENGKRYSQTGTLKFSDPTVDETTGSVTLRAIF
                     PNPNGDLLPGMYVTALVDEGSRQNVLLVPQEGVTHNAQGKATALILDKDDVVQLREIE
                     ASKAIGDEWVVTSGLQAGDRVIVSGLQRIRPGIKARAISSSQENASTESKQ"
     gene            7117..7395
                     /locus_tag="JNZ57_002440"
     CDS             7117..7395
                     /locus_tag="JNZ57_002440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828636.1"
                     /translation="MRDLQTSGIVGLSASKVGYRHSDRHGEVNDKKNVAVLPTVPASI
                     RATKGSTGGYTYQGNKVVLASPLVITGGNEISICIPRHASHQFQLLMS"
     gene            complement(7396..7923)
                     /gene="gadE"
                     /locus_tag="JNZ57_002441"
     CDS             complement(7396..7923)
                     /gene="gadE"
                     /locus_tag="JNZ57_002441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadE"
                     /protein_id="HAY8828637.1"
                     /translation="MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVI
                     IDTYHNHILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEIT
                     YGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITLTLNISQQTLKIQKFNIMYKLKL
                     RRMSDIVTLGITSYF"
     gene            complement(8722..9294)
                     /gene="hdeD"
                     /locus_tag="JNZ57_002442"
     CDS             complement(8722..9294)
                     /gene="hdeD"
                     /locus_tag="JNZ57_002442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-resistance protein HdeD"
                     /protein_id="HAY8828638.1"
                     /translation="MLYIDKATILKFDLEMLKKHRRAIQFIAVLLFIVGLLCISFPFV
                     SGDILSTVVGALLICSGIALIVGLFSNRSHNFWPVLSGFLVAVAYLLIGYFFIRAPEL
                     GIFAIAAFIAGLFCVAGVIRLMSWYRQRSMKGSWLQLVIGVLDIVIAWIFLGATPMVS
                     VTLVSTLVGIELIFSAASLFSFASLFVKQQ"
     gene            9549..9881
                     /gene="hdeA"
                     /locus_tag="JNZ57_002443"
     CDS             9549..9881
                     /gene="hdeA"
                     /locus_tag="JNZ57_002443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-activated periplasmic chaperone HdeA"
                     /protein_id="HAY8828639.1"
                     /translation="MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLA
                     VDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGE
                     WDKIKKDM"
     gene            9997..10323
                     /gene="hdeB"
                     /locus_tag="JNZ57_002444"
     CDS             9997..10323
                     /gene="hdeB"
                     /locus_tag="JNZ57_002444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-activated periplasmic chaperone HdeB"
                     /protein_id="HAY8828640.1"
                     /translation="MNISSLRKAFIFMGAVAALSLVNAQSALAANESAKDMTCQEFID
                     LNPKAMTPVAWWMLHEETVYKGGDTVTLNETDLTQIPKVIEYCKKNPQKNLYTFKNQA
                     SNDLPN"
     gene            10387..11034
                     /locus_tag="JNZ57_002445"
     CDS             10387..11034
                     /locus_tag="JNZ57_002445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HAY8828641.1"
                     /translation="MTAEFIIRLILAAIACGAIGMERQMRGKGAGLRTHVLIGMGSAL
                     FMIVSKYGFADVLSLDHVGLDPSRIAAQVVTGVGFIGAGNILVRNQNIVGLTTAADIW
                     MTAAIGMVIGSGMYELGMYGSVMTLLVLEVFHQLTFRLMNKNYHLQLTLVNGNTVSML
                     DWFKQQKIKTDLVSLQENEDHEVVAIDIQLHATTSIEDLLRLLKGMAGVKGVSIS"
     gene            complement(11076..11606)
                     /locus_tag="JNZ57_002446"
     CDS             complement(11076..11606)
                     /locus_tag="JNZ57_002446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY8828642.1"
                     /translation="MFLIITRDTMFFTAMKNILSKGNVVHIQNEEEIDGMLHQNAFVI
                     IDTLMNNVFHSNFLTQIERLKPVHVIIFSPFNIKRCLGKVPVTFVPRTITIIDFVALI
                     NGSYCSVPEAAVSLSHKQHQVLSCIANQMTTEDILEKLKITLKTFYCHKHNIMMILNL
                     KRINELVRHQHIDYLV"
     gene            complement(11762..12328)
                     /gene="slp"
                     /locus_tag="JNZ57_002447"
     CDS             complement(11762..12328)
                     /gene="slp"
                     /locus_tag="JNZ57_002447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312404.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein Slp"
                     /protein_id="HAY8828643.1"
                     /translation="MNMTKGALILSLSFLLAACSSIPQNIKGNNQPDIQKSFVAVHNQ
                     PGLYVGQQARFGGKVINVINGKTDTLLEIAVLPLDSYAKPDIEANYQGRLLARQSGFL
                     DPVNYRNHFVTILGTIQGEQPGFINKVPYNFLEVNMQGIQVWHLREVVNTTYNLWDYG
                     YGAFWPEPGWGAPYYTNAVSQVTPELVK"
     gene            complement(12577..13800)
                     /locus_tag="JNZ57_002448"
     CDS             complement(12577..13800)
                     /locus_tag="JNZ57_002448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828644.1"
                     /translation="MSIDFTPGIINTYHGDIYNCTTNTDNVKTPDTPKWPCDNWEEQQ
                     PINSTFSGEGYNPEQFDLAQQQLQQINACHTNTTYTNADYSKVVVQLVSLINNIETIS
                     STPLTQQTQSILNQINNIRYEKNKSAECRIIVVANPKPDKAIITKISVEEGIPITFSV
                     QTMFSDTNFIAEQRADLPTNIKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNM
                     TGQNLSGFVLTLSRFYFEDLLNINFTDANLGDTIFYIKNTLPPKLYKDGQYLDKQIEG
                     LFSTLLTINDNFLRAKAEIASTIIKFLEARITNLSYNDILKYQQEFQKQCYKQVKAST
                     TLSRYNKIQTWAEMSEYQFEVFQFETLNPKKMSHTPYLKRPLPNEKDINYGVEIEIPS
                     GKRIRLSNHYQNIIP"
BASE COUNT         3896 a         3004 c         3105 g         4039 t
ORIGIN      
        1 ggactttgct gaactgttgc tggaagacta caaagcctcc ctgaaatatc tcagcgatca
       61 cccgaaactg cagggtattg cccagcagaa cagctttaaa cacacctgat aacataacgt
      121 tgtaaaaacc gaatgcccag cctttaaaaa aacagctggg cattcggttg cttattaatc
      181 gcaataatat attggctgtc tattcatcgt gttgataaga tatatgttat atgaatgttt
      241 attaaatgta gcgattgcct ttaatgtcac gaaaagggat tatttgcttg ctattaattt
      301 cactgcgttc ttaaacacgt ttttgtatta taaatccagt catcctgccc gtagaacatc
      361 acacattatc atcctgttct cccgcttcgt ttaaatttat ttatcaatca atttgactta
      421 agagggcggc gtgctacatt aattaacagt aatatgttta tgtaatatta agtcaactat
      481 gcaatcatta catgggaatt gtctaattgc gtacgcaaga cataaatata ttctcaccat
      541 ggttaatggt gaatatcgct attttaatgg tggtgacctg gtttttgcgg atgcaagcca
      601 aattcgagta gataagtgtg ttgaaaattt tgtattagta tcaagggata cgctttcatt
      661 atttctgccg atgctcaagg aggaggcatt aaatcttcat gcacataaaa aaatttcttc
      721 attactcgtt catcactgta gcagagatat tcctgttttt caggaagttg cgcaactatc
      781 gcagaataag aatcttcgct atgcagaaat gctacgtaaa agagcattaa tctttgcgtt
      841 gttatctgtt tttcttgagg atgagcactt tataccgctg cttttgaacg ttttgcaacc
      901 gaacatgcga acaagagttt gtacggttat caataataat atcgcccatg agtggacact
      961 agcccgaatc gccagcgagc tgttgatgag tccaagcctg ttaaagaaaa aattgcgcga
     1021 agaagagaca tcatattcac agttgcttac tgagtgtaga atgcaacgtg ctttgcaact
     1081 tattgttata catggctttt caattaagcg agtcgcagtg tcctgtggat atcacagcgt
     1141 gtcgtacttc atttacgtct ttcgaaatta ttatgggatg acgcccacag agtatcagga
     1201 gcgatcggcg cagggattgc cgaaccgtga ctcggcggca agtattgttg cgcaaggaaa
     1261 tttttacggc actgaccgtt ctgcggaagg aataagatta tagaatttta ctcagacata
     1321 aaaaaaaccc ggcatagggg accgggaaga ggatagtctg ccgtctccag actaataaac
     1381 cgttataaca ctccctgttg gcacgggaaa ctttgtgctc tcagtaagtt aaatataact
     1441 tttactggaa ataagatcag ccattttttt ataaacataa gctatacgct gtgcgaaaat
     1501 atattcgtgc tgcatttact tattatcaat taactgttat gcaaaactac tttgtggata
     1561 aattttggtc ctaccaaatc tggcagtttt tgcgctaaga aacagtctgg caacatttca
     1621 ttagtatact gaaattgaaa taatcgcagt atgaaatata agggataatc atgactcatg
     1681 tctgctcggt gatcctcatt cgtcgttcat tcgatattta tcatgaacag cataaaatat
     1741 cgctgcataa cgagagtatc gtgctgctgg agaaaaattt ggcagacgat tttgcgtttt
     1801 gttcaccgga tacgcgacga ctggatatcg atgagctgac agtttgccat tacttacaaa
     1861 atattcgtca gctaccacgc aatttagggt tacatagcaa agaccgtcta ttaattaacc
     1921 agtcaccccc catgccgctg gtgacggcga tttttgatag cttcaatgaa tccggggtaa
     1981 attcaccgat actgagcaat atgctctacc tttcctgttt atcgatgttt tctcataaga
     2041 aagaactgat ccccttactt ttcaatagca tcagcactgt ttcaggaaaa gttgaacgcc
     2101 ttattagctt tgatatcgcc aaacgttggt atctgcgcga tatcgcggaa agaatgtata
     2161 ccagcgagag tctcatcaaa aaaaagttgc aggatgaaaa tacctgtttc agtaaaatat
     2221 tactcgcttc caggatgtcg atggccagac gattactcga gttacgtcaa attcctctgc
     2281 atactattgc agaaaaatgt ggctatagca gtacgtcgta ctttataaac acatttcgac
     2341 aatattatgg tgtaacgcca catcagtttg cgcaacattc gccaggtacc ttttcctgac
     2401 atattttgca tttgaatatt ggtcaggatc tcacacctgc ttcatgtgaa actcttccct
     2461 gatgatttct gccgggctac cggctagttc tctttcgcag tttgccaggc ggtataggta
     2521 ttttcaggag gaaaagactc ggcatgtttg ggattattaa gctgacaatt catacgatta
     2581 cgggaatgtg ggtcagtatt gtgctgttca aattgatgac gaatggctgg agtggtttct
     2641 actttcagtg ctgtgtacta agcctggtat tcctgacggt tagctggttg ttgagtggtg
     2701 aatggttagc aggaaagagt aaggctgaac cttcacgttc aaccttactc tcatttacac
     2761 gttacgcttt tttaaagcgg gcaaagagat gttccactac aacgaaaaag accggaacga
     2821 agtaaattgc cagcactgtt gcggcaaaca tcccgcccat cacgccggta cctaccgcgt
     2881 tttgcgcgcc agaaccggca ccatgactga taaccagcgg cagcacgccg agaataaagg
     2941 ccagagaggt catcaggatt gggcgtaaac gcatccgcgc cgcttcgatg attgccccta
     3001 tcggcgtttt cccttctttc tgcatcatct caacggcaaa ttcgacaatc aggatggcgt
     3061 tcttggcgga aagcccgatg gtggtcagca aaccaacctg gaagtagacg tcattactta
     3121 agccgcgcag atcggtggcc agtaatgcgc caacgacgcc taacggaaca accaacatca
     3181 ccgagaacgg aattgaccag ctctcataga gtgcggcgag ggcgaggaac accacgacca
     3241 gtgaaatggc atacagtgca ggagcctggt ttgaggataa cgcttcctga tacgacagtc
     3301 cggtccatga gtagccgacg cctgccggaa gtttagcgac caggtctgcc ataaatttca
     3361 tagcgtcacc ggtacttttc ccggccgccg cttcacctaa aatctccatt gacgggatgc
     3421 cgttgtagcg ttccaatcgc ggtgaaccat aggtccattc ggtagacgag taggcagaaa
     3481 gcggtgccat cgtgccagag gcgttgcgta cataccattg gttgatgtta tccggcaaca
     3541 tacggaacgg cgtgcctgcc tggacataca cttttttcac ccgcccctgg ttgaggaagt
     3601 cgttcacgta gctgctgccg aaggcggtgg aaattgtctg gttgatatca gacagcgcca
     3661 cacccattgc ctcagctttc gcggcgttga cgttcacttt gaacatcggc gtatcttcca
     3721 ggccgttcgg gcgtaccccg gtgacctggt caggcgattg cgctgccagt gataacagct
     3781 cgtttcgtgc ctgggttagt ttttcgtgcc ccaggttacc gttgtccagc agttccatat
     3841 caaaacctga cgcggtaccc agttcagcca ccgcgggtaa gttgaacggg aagacgacgg
     3901 ctttattgat actgcttaac gcaatcattg cccgctgaat gatcgcggta accgagtttt
     3961 cctcaccgac acgttcagac cacggcttga gactgataaa cgccaggccg ttgttttgcc
     4021 cctggccgct gaagccaaag ccgccaacgg taaacaccga ctgaacatta tctttctctt
     4081 ttgtaagata ataatccgtc acctgttgca gcactttcgt ggtgttaacc atggtggcac
     4141 cggaaggtaa ctgcgcggtg gtcataaata ccccctgatc ctcttctggt aagaaagagg
     4201 tcggtgtacg caggaacagc accgccatcc cggcgcaaat cagcaggtag accaccatgt
     4261 agcgaccggt acaacgcaac agcgagcggg tgctatcggt atagtgctga gttgattttt
     4321 caaacagcgt gttgaagcgt gcgaacaggg cgttaggttt gtgaccgcct tccggcgcgg
     4381 ctttcagaat ggtggcgcac agggcagggg tcaggctcat tgccacaaat actgaaagca
     4441 gcatggagga gatcagcgtg atggagaact ggcggtagat ctccccggtt gcgccgctca
     4501 taaaggccat cggcataaac actgcggaaa gaacaacagc aataccgacc agcgcacgtt
     4561 ggatctgccc catcgattta tgcgtcgctt ccttcggtgg tagcttatct tccgcaatga
     4621 cacgctcgac gttctccacc accacgatgg cgtcatccac cagtaaccct atcgccagca
     4681 ccatcccgaa catagttaac gtgttgatgg tgaaaccgac cgccgacaag atcgcaaacg
     4741 tcccgagaat aaccaccggt acggcaatcg tcgggatgat tgtggcacgg aaattctgca
     4801 aaaacagata catgaccagg aagacgagga tgatagcctc aaccagtgtt ttaaaaactt
     4861 cctgaataga aatttcgata aacggcgtgg tgtcgtaagg ataaaccgtc ttcagacttg
     4921 cggggaaata ggctgataag cggttcagct cctctttgac tgcccgcgag gtatccaggg
     4981 cgtttgctcc ggtagccagt ttgatggcga tcccggcagc aggtttgccg ttatagcgcg
     5041 ccacggtgga ataatcttcc gctccaagtt cgacgcgggc gacatcacgc agcagcactt
     5101 gcgaaccatc ttgctgaact ttcaacagga ttttgccaaa ttcttccggc gtttgcagac
     5161 gcgtctgcac aatgatcgag gcgtttagtt gctggtctgc cgcctgtggc atgccaccca
     5221 gttgaccacc ggaaatctgg ttgttttgca ccttaatctg ggaaataaca tcggaaggta
     5281 ccagattgta tttattgagt ttttgcgggt ccagccagat acgcatggcg tactcggaac
     5341 caaagagctg tacgctacca acgcccgcgg tacggcttag cgggtctttg atattagacg
     5401 ctacatagtc cgcgatatcg tactggttga ggctgccgtt atcagaaata aacgccgcta
     5461 ccatcagaat attactgctc gacttatcaa cgctaatccc ctgctgctgc accgcttcag
     5521 gtaatgaagg catagcgagt tgcagtttat tttgcacctg aacctgtgcg atatcaggag
     5581 atgtcccagt ctcgaaggtc agagtgatag aggcattacc cgccgcatca ctggttgaag
     5641 acatgtacat caggccatca agcccattca tattttgctc aatcacctga gtgaccgagt
     5701 cttctaccgt ttgcgcatcg gcacctggat aggtagcgct gacggtaatg gtcggtggcg
     5761 caatctgcgg atactgcgca accggtaagt tcatgatcgc cagaccacct gcaagcatca
     5821 taataatggc aagtacccag gcaaaaaccg ggcgatcaat aaaatagtta gccatgaaag
     5881 tccccttaag cctgcaacgt tattgtttcg attcggtgct ggcgttttcc tggctggagg
     5941 aaattgctcg tgctttgata cccggacgaa tgcgttgcaa accggaaacg atcacccgat
     6001 cgccagcctg caagccagag gtgacaaccc actcgtcgcc gatggctttg ctggcttcaa
     6061 tttcgcgtag ctgcacaaca tcgtctttat ccagaatgag cgccgttgct ttaccctggg
     6121 cgttgtgggt gacgccttcc tgcggcacca gtaatacatt ctggcggcta ccttcatcca
     6181 ctaatgccgt gacgtacatg ccaggcagca agtcaccatt tgggttgggg aaaatcgccc
     6241 gtaacgtcac ggagcccgtg gtttcatcca ccgtcgggtc ggagaatttc agtgtgccgg
     6301 tctggctgta gcgtttacca ttttccagat tgagctgtac tggcgtactg ccctgaacct
     6361 gtttgatttg cccactggcg acctcttctt tcatgcgcaa gaaatcctgc accgactgcg
     6421 tgagatcgac ataaatcggg tccagacgtt gtacggtaac cagcgaatct gcctgattag
     6481 cggtaacgag tgcgccgacg gtcaccgacg atttcccgct gacgcccgta atcggcgagg
     6541 tgacattcgc gtattgcaga ttgatcgtcg cctgttcaac agccgctttg gcgacggtga
     6601 cattggcttc tgcttcattc agctgggtgc gcgcggtgtc gtaatcctga cggctaacgt
     6661 agttggtctt cagcaacgat gcctggcggt taaaggtgat gcgggcattg ctggcggtag
     6721 agagcgcttt cgccagcgag cctttggcgg agtttagctc ggcctgtaaa ggtgcaggat
     6781 caatctgata cagcgaatcg ccctggttca ctttatcgcc ttcgataaag ttgcgtttaa
     6841 tgataatacc gcccacctgg ggacgtatct cggcaacttc ataaggaacg gttctaccgg
     6901 gcaattcgct caacacattg accgaaccgg gggagagtgt gacgacaccg acctcagacg
     6961 tcatggcggc ggcgttttcc gccgatttgt catcgcaggc ggtgagcatc gcgccgcaga
     7021 ataacaacgg tattaacagc tttcttcttc tgttcatttt agtccctgaa aattcttgag
     7081 aaataacggt tctttaaatt gcgcgcgagg agagatatga gggatttaca gaccagcggc
     7141 atagtggggt tgtcagccag taaggtggga tacaggcaca gtgatcgaca tggtgaggtc
     7201 aacgacaaaa aaaatgttgc cgttctgcca acagttcctg ccagcattcg ggcaacgaag
     7261 ggttctactg gtggatacac ataccagggg aataaagtcg ttttagcctc tcctttagta
     7321 atcaccgggg gtaatgaaat cagcatctgc atccctcgtc atgccagcca tcaatttcag
     7381 ttgcttatgt cctgactaaa aataagatgt gatacccagg gtgacgatgt cgctcatacg
     7441 tcttagtttc aacttgtaca taatgttgaa tttctgaatc tttaatgttt gttgcgaaat
     7501 attgagcgtc aacgtgatat tgctttcatt tttatttttc agaatcagtt gcataatttt
     7561 gaactgatta tgtgaaaaac ataattgtga attcttatgg ggcaagtgtt taccataagt
     7621 aatctcaaga agatttttga tactttcttt gcggctaaca aaataaatag gcgctttagc
     7681 ttttagttta ctgatgtgat aaggtgccaa aacaataatt ctctcggcat ctaatttctc
     7741 cagaaattta atcgcttctt catcaaggat atgattgtga taggtatcaa tgataacctt
     7801 gaagggttta ttgcctactt ttttgatctc tgacagggaa ttgattttta tcatttcgtg
     7861 attatctttc aactgccaaa agccctgtaa aagaaaagaa tctttcgtca tgagaaaaat
     7921 cataacttgc tccttagccg ttatcgtttc gaacatgtca tccttttcat tatttacatc
     7981 cttgtccgaa tcgttgttca atatagtaaa cgcctataag aactttaccc ttcgtgaact
     8041 aatacgtcta ttaacactaa tcaatacttc agatttatcc atcacgcact ccatatattg
     8101 atcctaagta agattcctgg ttgttatcag cttgtaaata gtaaacaaaa agttaacgtt
     8161 tgcggattac tgcccaagaa taagttatca ataaccagtt tgtgatctct gaagaatatt
     8221 actaaagtta aaatgtaatc cgatttaaat atcgagtctc cttgtttcga cttaagctgg
     8281 caattggatt gccagctttc ttttaacgca ttgaaattac ctgagtaaat aacgcattca
     8341 tgtcttcagg tttttatata gcgtctggag acacggatat ttatgcaatg taatcaacgc
     8401 cagttgcaaa aaaatgaacc cggattactt atttaaccgc ccatagcatc aacgcttacg
     8461 gaactctttg ttcactttcc cacagcactt ttaaaacatt aaacctgact acggaaaata
     8521 tcagccatga taatgtttga aatggctaat ttgccattga gtgaaaaaaa ttagatgaaa
     8581 ttcagtaggt tgaaataatc actagcaggt aattatttca atgatagtgc gcaattgatc
     8641 tacaacactg cgtagcggag agagtattaa tcggatcata gtcacatcaa gtgactatga
     8701 tccgggtgac aaccggggta attattgctg cttaacgaac aaactggcga agctgaacag
     8761 gctggcggcg ctaaatatca gttcaattcc caccagtgtg gaaaccagcg ttacagacac
     8821 catcggcgtt gcaccaagga atatccaggc aatgacgata tccagcacac caataacgag
     8881 ctgtagccag ctgcctttca ttgaacgctg acgataccaa ctcatcaggc gaataacccc
     8941 tgcaacacag aacaaaccgg caataaatgc cgcaatggca aaaatgccca gctccggtgc
     9001 gcggatgaag aaatagccga tcaataaata ggcgactgcg acgaggaaac cggataatac
     9061 cggccagaaa ttatgactgc ggttgctgaa taacccgaca ataagcgcaa tacccgagca
     9121 gattaataat gcacccacta ctgtgcttaa aatatcgcca gagacgaacg ggaaactgat
     9181 acacagcaac ccgacgataa acagcagcac ggcaataaac tggattgctc tgcgatgttt
     9241 tttaagcatc tccagatcaa acttcaaaat tgttgcctta tctatatata acatagaacc
     9301 accctataaa attaagaaga aaatcccctg ctatcaatct atgccaaaaa cgcgtctaag
     9361 aatgcagtcg atttaataaa aatttcctaa ttgcagtatc tgatgcatct gtaactcatt
     9421 gtattgaaat aaaaatatct gattttgata ttttccatca acatgacata tacagaaaac
     9481 caggttataa cctcagtgtc gaaattgatt cgtgacggct ctttcacttt atagttgagg
     9541 atattacgat gaaaaaagta ttaggcgtta ttcttggtgg tctgcttctt ctgccagttg
     9601 tgagcaatgc agcggatgcg caaaaagcag ctgataacaa aaaaccggtc aactcctgga
     9661 cctgtgaaga tttcctggct gtggacgaat ccttccagcc aactgcagtt ggttttgctg
     9721 aagcgctgaa caacaaagat aaaccagaag atgcggtttt agatgttcag ggtattgcaa
     9781 ccgtaacccc agctatcgtt caggcttgta ctcaggataa acaagccaac tttaaagata
     9841 aagttaaagg cgaatgggac aaaattaaga aagatatgta attccgggaa tgcgttacat
     9901 cgtacttcct tgcatattga acaggccgga atatcttctt taaaagcagc tattcctcct
     9961 gttcatatat aatctatata ttgaatgggt tacaaaatga atatttcatc tctccgtaaa
    10021 gcgtttattt ttatgggcgc tgtagcggct ttgtcactgg tgaacgcaca atctgcgctg
    10081 gcagccaatg aatccgctaa agatatgacc tgccaggaat ttattgatct gaatccaaaa
    10141 gcaatgaccc cggttgcatg gtggatgctg catgaagaaa cagtatataa aggtggcgat
    10201 accgttactt taaatgaaac cgatctcact caaattccta aagtgatcga atactgtaag
    10261 aaaaacccgc agaaaaattt gtataccttc aaaaatcaag catctaatga cttgccgaat
    10321 taatgaggta caagtaaaaa ggagtagcaa gttgagccat cttgctgctc ctttttgcat
    10381 ttttatatga cagcagaatt tattatacgt cttatactcg cggcaattgc ctgtggcgct
    10441 attggcatgg aaaggcaaat gcgaggcaaa ggagcagggt tacgcacaca tgtattaatt
    10501 ggcatgggaa gcgccctgtt tatgattgtt tcgaaatatg gttttgctga cgtgctgtct
    10561 ttagatcacg tcggactcga ccccagccgt attgctgctc aggtggtgac gggcgtcggg
    10621 tttatcggtg caggtaacat tctcgttcgt aaccaaaata ttgtaggttt gacgacggca
    10681 gcggatatct ggatgaccgc cgctataggt atggttattg gcagtggtat gtacgaattg
    10741 ggtatgtatg gttcagtgat gaccttgctg gtgctggaag tcttccatca attaaccttc
    10801 cgcctgatga acaaaaatta ccatttacag ctgacattag tgaacggtaa tacggtatca
    10861 atgctcgact ggtttaagca gcaaaaaata aaaacggatt tagtttcgtt gcaggaaaat
    10921 gaagatcatg aagtggtcgc cattgatatc cagcttcatg ccacaacgtc gatagaagat
    10981 ctgttgcgat tattaaaagg tatggcaggg gtgaaaggcg tttcaattag ctaatctgtg
    11041 tggcagcgta gtcagactca ccgtaagcct gaaattcaca ccagataatc aatatgctga
    11101 tggcgtacca gctcattgat ccgcttaaga ttgaggatca tcatgatatt gtgtttatgg
    11161 cagtagaacg tttttagcgt tattttcagt ttctccagaa tatcctccgt tgtcatttga
    11221 ttcgcaatgc agctcagaac ctgatgttgc ttgtgcgaaa gtgacacagc cgcttcaggc
    11281 acagagcagt aactgccatt gatgagtgcg acaaaatcga tgatagtgat agtccgcgga
    11341 acaaaggtca ccggcacttt ccccaggcag cgtttaatat taaaggggga gaaaataatc
    11401 acatggacag gttttaatcg ttcaatttga gtgagaaaat tagaatgaaa tacattattc
    11461 attaatgtat caataatgac aaaggcattc tgatgcaaca ttccgtcgat ctcttcttcg
    11521 ttctgtatat gaacgacatt acctttgctc aaaatgtttt tcatcgcggt gaagaacatc
    11581 gtatccctgg taattataag aaacataacc gactcctggt gcggacatta attttataat
    11641 cagtttgcca aaggtaatta acaggacagg gcttataata ataatagtta gcttgctgtg
    11701 tattaatttt atgtaatgca cgatgcagat gctgagaaag catctgcatc tttcggtggt
    11761 gttatttgac cagctcaggt gttacctgac tcaccgcatt ggtgtagtaa ggcgcacccc
    11821 agcccggttc cggccagaat gcaccatagc cgtaatccca taggttatag gtggtattaa
    11881 ccacttctct caaatgccac acctggatgc cctgcatatt cacttccagg aagttatacg
    11941 ggactttatt gataaagcca ggttgttcac cctgaatggt accgaggatg gtaacaaagt
    12001 gattacgata gttcactggg tcaaggaagc cgctttgtct ggcgagcagt cggccctgat
    12061 agttggcttc aatatcaggt ttcgcatagc tatccaacgg taatacagcg atttctaaca
    12121 acgtatccgt tttgccattg ataacgttga taaccttccc accaaagcgc gcttgttgac
    12181 caacatataa ccccggctgg ttatgaacag caacaaaact tttttgaata tcaggttggt
    12241 tattgccttt gatattttgc ggaattgaac tacatgcggc aagcaaaaat gaaaggctga
    12301 ggatgagtgc accttttgtc atgttcatgt tactatcctt atcaacaaat attaaaacca
    12361 taatagatat ttctttatag ttttcatctg attctgaggt gatatgcctg atagtaacgt
    12421 aaacctgtct gatgtttata tcccttttgt ttagttcaat tccattgatt ttggggcgtg
    12481 gcataaagta tccatcgccc cataatataa tcctttgttt taaaattaca taaaatctat
    12541 ttttattcaa taattataaa gtgctaataa tcaatattat ggtattatat tctgataatg
    12601 atttgataag cgaattcttt tgccagatgg tatttctatt tccaccccat aatttatatc
    12661 tttttcatta ggaagtggcc tctttaaata aggcgtgtgt gacatttttt ttgggttaag
    12721 cgtctcgaat tgaaatactt cgaactgata ttcagacatt tctgcccatg tttgaatttt
    12781 attgtatcga gagagtgtcg tagaggcttt aacttgctta taacattgtt tttggaattc
    12841 ttgctgatat tttaatatgt cattgtatga aagattggtt atcctggcct ctaaaaattt
    12901 aattattgtt gaagcaattt ccgcttttgc tcgtaaaaag ttgtcattaa tggttaataa
    12961 tgttgaaaat aaaccttcga tttgtttgtc aagatattgt ccatctttat ataatttggg
    13021 gggtagggtg ttctttatgt aaaaaatagt gtcacctaaa tttgcgtcag tgaaatttat
    13081 attaagtaga tcttcgaaat aaaaccttga caaggttaga acgaacccgg aaaggttctg
    13141 tcctgtcata ttgaaatcaa taaagttggt tccggcaaag actttcatcc tgtttttatt
    13201 ttcactgtgc tcaatatata acttcgtcat tttttgatac aggctttgaa tatcttttat
    13261 attagttggt aagtcagctc gttgttcagc aataaaatta gtatctgaaa acatggtttg
    13321 gacactgaat gttatgggta ttccctcttc tacgctaatt ttagttatga ttgccttgtc
    13381 gggtttagga ttagcgacaa caatgattcg acattcagca cttttgtttt tttcatatct
    13441 aatgttatta atctgattaa gtattgattg tgtctgttgc gtaagtggtg tcgaacttat
    13501 cgtttcaatg ttattaataa gacttacaag ttgaaccaca acttttgagt agtctgcatt
    13561 tgtatatgtg gtgttcgtgt ggcatgcatt aatttgttgg agttgttgtt gcgctaaatc
    13621 aaattgttca gggttgtatc cttctccaga gaatgtggaa ttaatgggtt gttgttcttc
    13681 ccaattatca caaggccact tcggtgtgtc tggcgtttta acattatcgg tatttgttgt
    13741 gcagttataa atatcgccgt gatatgtatt tattatacct ggggtaaagt caattgacat
    13801 aacattcctt attcatcatc tgttttatgc taaggttttt aaattggata attagaacag
    13861 gaatggattt tcttctacac acaataaata taatgcgtta tatcttcctg atataattac
    13921 ctttaaattc cctttcattt ccacccggta atatttgtgt ataaaaaaag cagtgatagt
    13981 atcgtaaagg aaaacgttaa caactatcaa aaagcgctca ttttaaaaag ttattatgtt
    14041 ctcc
//
LOCUS       DADMHC010000100        13964 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.100, whole genome shotgun sequence.
ACCESSION   DADMHC010000100 DADMHC010000000
VERSION     DADMHC010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13964)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13964)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13964
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.100"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            438..2069
                     /gene="oppA"
                     /locus_tag="JNZ57_002449"
     CDS             438..2069
                     /gene="oppA"
                     /locus_tag="JNZ57_002449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707150.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein OppA"
                     /protein_id="HAY8828645.1"
                     /translation="MTNITKRSLVAAGVLAALMAGNVALAADVPAGVTLAEKQTLVRN
                     NGSEVQSLDPHKIEGVPESNISRDLFEGLLVSDLDGHPAPGVAESWDNKDAKVWIFHL
                     RKDAKWSDGTPVTAQDFVYSWQRSVDPNTASPYASYLQYGHIAGIDEILEGKKTITDL
                     GVKAIDDHTLEVTLSEPVPYFYKLLVHPSTSPVPKAAIEKFGEKWTQPGNIVTNGAYT
                     LKDWVVNERIVLERSPTYWNNAKTVINQVTYLPIASEVTDVNRYRSGEIDMTYNNMPI
                     ELFQKLKKEIPDEVHVDPYLCTYYYEINNQKPPFNDVRVRTALKLGMDRDIIVNKVKA
                     QGDMPAYGYTPPYTDGAKLTQPEWFGWSQEKRNEEAKKLLAEAGYTADKPLTINLLYN
                     TSDLHKKLAIAASSLWKKNIGVNVKLVNQEWKTFLDTRHQGTFDVARAGWCADYNEPT
                     SFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAQRTALYTKAEQQLDKDSAIVPV
                     YYYVNARLVKPWVGGYTGKDPLDNTYTRNMYIVKH"
     gene            2155..3075
                     /gene="oppB"
                     /locus_tag="JNZ57_002450"
     CDS             2155..3075
                     /gene="oppB"
                     /locus_tag="JNZ57_002450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppB"
                     /protein_id="HAY8828646.1"
                     /translation="MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPE
                     VMANIEAKYHLNDPIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGA
                     AAFFLAVILGVSAGVIAALKQNTKWDYTVMGLAMTGIVIPSFVVAPLLVMIFAIILHW
                     LPGGGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRR
                     IILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVL
                     SLTILVGALTILFNAIVDVLYAVIDPKIRY"
     gene            3090..3998
                     /gene="oppC"
                     /locus_tag="JNZ57_002451"
     CDS             3090..3998
                     /gene="oppC"
                     /locus_tag="JNZ57_002451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000979653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppC"
                     /protein_id="HAY8828647.1"
                     /translation="MMLSKKNSETLENFSEKLEVEGRSLWQDARRRFIHNRAAVASLM
                     VLVLIALFVILAPMLSQFAYDDTDWAMMSSAPDMESGHYFGTDSSGRDLLVRVAIGGR
                     ISLMVGVAAALVAVVVGTLYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFF
                     GQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAAQVGGVSTSGIVIRHIVPNV
                     LGVVVVYASLLVPSMILFESFLSFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPA
                     GFLVVTLFCFNFIGDGLRDALDPKDR"
     gene            4010..5023
                     /gene="oppD"
                     /locus_tag="JNZ57_002452"
     CDS             4010..5023
                     /gene="oppD"
                     /locus_tag="JNZ57_002452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppD"
                     /protein_id="HAY8828648.1"
                     /translation="MSVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNF
                     SLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLR
                     AEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARK
                     RMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREF
                     NTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLD
                     AEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICSSAPPLEEFTPGRLCACFKPVE
                     ELL"
     gene            5020..6024
                     /gene="oppF"
                     /locus_tag="JNZ57_002453"
     CDS             5020..6024
                     /gene="oppF"
                     /locus_tag="JNZ57_002453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppF"
                     /protein_id="HAY8828649.1"
                     /translation="MNAVTEGRKVLLEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVT
                     LRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGHVAWLGKELLGIKPDEWRAVRSD
                     IQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKMSRQEVRERVKAMMLKVGLLPNLINR
                     YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSL
                     IFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHNPLHPYTRALMSAVPIPDPDLE
                     KNKTIQLLEGELPSPINPPSGCVFRTRCPIAGPECAKTRPVLEGSFRHAVSCLKVDPL
                     "
     gene            complement(6077..6406)
                     /locus_tag="JNZ57_002454"
     CDS             complement(6077..6406)
                     /locus_tag="JNZ57_002454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309775.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciU family protein"
                     /protein_id="HAY8828650.1"
                     /translation="MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEE
                     RGGAELFDPAEDWQEHVDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKL
                     CHIIWRE"
     gene            complement(6441..7901)
                     /gene="cls"
                     /locus_tag="JNZ57_002455"
     CDS             complement(6441..7901)
                     /gene="cls"
                     /locus_tag="JNZ57_002455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HAY8828651.1"
                     /translation="MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLII
                     YILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAP
                     LFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEIVFYIWQPGGMADQ
                     VAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRR
                     MDLRQHRKMIMIDNYIAYTGSMNMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIY
                     SCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAR
                     EYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAG
                     VKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQ
                     DDYISRSRLLDARLWLKRPLWHRVAERLFYFFSPLL"
     gene            8044..8217
                     /locus_tag="JNZ57_002456"
     CDS             8044..8217
                     /locus_tag="JNZ57_002456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciY family protein"
                     /protein_id="HAY8828652.1"
                     /translation="MKRSRTEVGRWRMQRQASRRKSRWLEGQSRRNMRIHSIRKCILN
                     KQRNSLLFAIYNI"
     gene            complement(8272..9525)
                     /gene="kch"
                     /locus_tag="JNZ57_002457"
     CDS             complement(8272..9525)
                     /gene="kch"
                     /locus_tag="JNZ57_002457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="voltage-gated potassium channel protein"
                     /protein_id="HAY8828653.1"
                     /translation="MSHWATFKQTATNLWVTLRHDILALAVFLNGLLIFKTIYGMSVN
                     LLDIFHIKAFSELDLSLLANAPLFMLGVFLVLNSIGLLFRAKLAWAISIILLLIALIY
                     TLHFYPWLKFSIGFCIFTLVFLLILRKDFSHSSAAAGTIFAFISFTTLLFYSTYGALY
                     LSEGFNPRIESLMTAFYFSIETMSTVGYGDIVPVSESARLFTISVIISGITVFATSMT
                     SIFGPLIRGGFNKLVKGNNHTMHRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP
                     EDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCQAILALSDNDADNAFVVLSAKD
                     MSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSMLL
                     NSGHGIFSDNDEQETKADSKESAQK"
     gene            complement(9825..10121)
                     /locus_tag="JNZ57_002458"
     CDS             complement(9825..10121)
                     /locus_tag="JNZ57_002458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009448315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HAY8828654.1"
                     /translation="MLYVIYAQDKADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMP
                     AVDSNDPGAAGFTGSTVIAEFESLEAAQAWADADPYVAAGVYEHVSVKPFKKVF"
     gene            10336..11064
                     /gene="tonB"
                     /locus_tag="JNZ57_002459"
     CDS             10336..11064
                     /gene="tonB"
                     /locus_tag="JNZ57_002459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707161.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein TonB"
                     /protein_id="HAY8828655.1"
                     /translation="MTSMTLDLPRRFPWPTLLSVCIHGAVVAGLLYTSVHQVIELPAP
                     AQPISVTMVAPADLEPPQAVQPPSEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPK
                     PKPVKKVQEQPKRDIKPVESRPASPFENTAPARLISSTATAATSKPVTSVASGPRALS
                     RNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRY
                     EPGKPGSEIVVNILFKINGTTEIQ"
     gene            complement(11104..11502)
                     /gene="yciA"
                     /locus_tag="JNZ57_002460"
     CDS             complement(11104..11502)
                     /gene="yciA"
                     /locus_tag="JNZ57_002460"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HAY8828656.1"
                     /translation="MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAI
                     LAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASE
                     PIGQRYKATEALFKYVAVDPEGKPRTLPVE"
     gene            complement(11607..12146)
                     /locus_tag="JNZ57_002461"
     CDS             complement(11607..12146)
                     /locus_tag="JNZ57_002461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HAY8828657.1"
                     /translation="MKQFLDFLPLVVFFAFYKIYDIYAATAALIVATAIVLIYSWVRF
                     RKVEKMALITFVLVVVFGGLTLFFHNDEFIKWKVTVIYALFAGALLVSQWVMKKPLIQ
                     RMLGKELTLPQPVWSKLNLAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLI
                     FTLLSGIYIYRHMPQEDKS"
     gene            complement(12176..12919)
                     /locus_tag="JNZ57_002462"
     CDS             complement(12176..12919)
                     /locus_tag="JNZ57_002462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0259 family protein"
                     /protein_id="HAY8828658.1"
                     /translation="MSITAQSVYRDTGNFFRNQFMTILLVSLLCAFITVVLGHVFSPS
                     DAQLAQLNDGVPVSGSSGLFDLVQNMSPEQQQILLQASAASTFSGLIGNAILAGGVIL
                     IIQLVSAGQRVSALRAIGASAPILPKLFILIFLTTLLVQIGIMLVVVPGIIMAILLAL
                     APVMLVQDKMGIFASMRSSMRLTWANMRLVAPAVLSWLLAKTLLLLFASSFAALTPEI
                     GAVLANTLSNLISAVLLIYLFRLYMLIRQ"
     gene            complement(12947..13036)
                     /locus_tag="JNZ57_002463"
                     /pseudo
     CDS             complement(12947..13036)
                     /locus_tag="JNZ57_002463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460692.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
     gene            13276..13914
                     /gene="ompW"
                     /locus_tag="JNZ57_002464"
     CDS             13276..13914
                     /gene="ompW"
                     /locus_tag="JNZ57_002464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein OmpW"
                     /protein_id="HAY8828659.1"
                     /translation="MKKLTVAALAVTTLLSGSAFAHEAGEFFMRAGSATVRPTEGAGG
                     TLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPP
                     TLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVG
                     VDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF"
BASE COUNT         3747 a         3280 c         3437 g         3500 t
ORIGIN      
        1 aaggtcatcg ggcattatct gaacataaaa cactatcagt aagttggagt cattacctgt
       61 taaggcatgg atgcaagcta tagattctga tacggtcaat aaaagagaat tgcttaacaa
      121 ttttgcaaaa tgtattggcg agtaagaacc gcatttggta ctttccgggc aaccgccaga
      181 cgattcttta ttggtaatga gaataattaa caattaaaga gcgtcgcgaa agaataatgt
      241 gtctcgatag gggagacaca gtacgaatcg acataaggtg atcgtctgaa tcaccagaat
      301 aaataaagtc ggtgatagca atccgtaacg ataaagtaac ctgacagcag aaagtctccg
      361 agcctgtgca gggtcccaat ccgggattac acatgctggt taataccagt aattataatg
      421 agggagtcca aaaaacaatg accaacatca ccaagagaag tttagtagca gctggcgttc
      481 tggctgcgct aatggcaggg aatgtcgcgc tggcagctga tgtacccgca ggcgtcacac
      541 tggcggaaaa acaaacgctg gtacgtaaca atggttcaga agttcagtca ttagatccgc
      601 acaaaattga aggtgttccg gagtctaata tcagccgaga cctgtttgaa ggcttactgg
      661 tcagcgatct tgacggtcat ccggcacctg gcgtcgctga atcctgggat aataaagacg
      721 cgaaagtctg gatcttccat ttgcgtaaag atgcgaaatg gtctgatggt acgccagtca
      781 cagcacaaga ctttgtgtat agctggcaac gttctgttga tccgaacact gcttctccgt
      841 atgccagtta tctgcaatat gggcatatcg ccggtattga tgaaattctt gaagggaaaa
      901 aaacgattac cgatctcggc gtgaaagcta ttgatgatca cacattagaa gtcaccttaa
      961 gtgaacccgt tccgtacttc tataaattac ttgttcaccc atcaacttca ccggtgccaa
     1021 aagccgctat cgagaaattc ggcgaaaaat ggacccagcc tggtaatatc gtcaccaacg
     1081 gtgcctatac cttaaaagat tgggtcgtaa acgaacgaat cgttcttgaa cgcagcccga
     1141 cctactggaa caacgcgaaa accgttatta accaggtaac ctatttgcct attgcttctg
     1201 aagttaccga tgtcaaccgc taccgtagtg gtgaaatcga catgacttat aacaacatgc
     1261 cgatcgaatt gttccagaag ctgaaaaaag agatcccgga cgaagttcac gttgatccat
     1321 acctgtgcac ttactattac gaaattaaca accagaaacc gccattcaac gatgtgcgtg
     1381 tgcgtaccgc actgaaacta ggtatggacc gcgatatcat tgttaataaa gtgaaagcgc
     1441 agggcgacat gcccgcctat ggttacactc caccgtatac tgatggcgca aaattgactc
     1501 agccggaatg gtttggctgg agccaggaaa aacgtaacga agaagcgaaa aaactgctgg
     1561 ctgaagcggg ttataccgca gacaaaccgt tgaccatcaa cctgttgtat aacacctccg
     1621 atctgcataa aaagctggcg attgctgcct cttcattgtg gaagaaaaac attggtgtaa
     1681 acgtcaaact ggttaaccag gagtggaaaa cgttcctcga cacccgtcac cagggtactt
     1741 ttgatgtggc ccgtgcaggc tggtgtgctg actacaacga accaacttcc ttcctgaaca
     1801 ccatgctttc gaacagctcg atgaataccg cgcattataa gagcccggcc tttgacagca
     1861 ttatggcgga aacgctgaaa gtgactgacg aggcgcagcg cacagctctg tacactaaag
     1921 cagaacaaca gctggataag gattcggcca ttgttcctgt ttattactac gtgaatgcgc
     1981 gtctggtgaa accgtgggtt ggtggctata ccggcaaaga tccgctggat aatacctata
     2041 cccggaatat gtacattgtg aagcactaat ggcaatacgt ggggcaggag tgtcctgctc
     2101 cacggtgtct gatttttatc gcattacaga aggcacaggc cagaaggtag ggcaatgtta
     2161 aaatttattc tacgtcgctg tctggaagcg attccgacgc tatttattct tattactatt
     2221 tcgttcttta tgatgcgcct cgcgccggga agccctttta ccggcgaacg tactttaccg
     2281 ccagaagtga tggccaatat cgaagcgaaa tatcatctta atgatccgat catgacacag
     2341 tatttcagct acctgaaaca actggcgcac ggtgatttcg gtccatcgtt taaatataaa
     2401 gattattcgg tcaatgactt ggttgcatcc agttttcccg tttctgccaa actgggagcc
     2461 gcagcatttt tccttgcggt aatactgggt gttagtgctg gcgttattgc cgcattaaaa
     2521 caaaacacca aatgggacta taccgtgatg gggctggcaa tgaccgggat tgttatcccc
     2581 agttttgtgg ttgcaccatt attagtcatg atatttgcga tcattttgca ttggctgccg
     2641 ggcggtggct ggaatggtgg ggcgcttaaa ttcatgatat tgccgatggt ggcgttgtca
     2701 ctcgcttata tcgccagtat tgcgcgtatt acccgtggct ctatgattga agtattacac
     2761 tccaatttta ttcgtactgc ccgggcgaaa gggttaccta tgcggcggat cattttacgt
     2821 cacgcattaa aacctgctct gttacccgtg ctctcttata tgggccccgc atttgtcggc
     2881 attattaccg gttctatggt tatcgaaacc atttatggtt tgccggggat tggacaactg
     2941 ttcgttaatg gcgcattgaa ccgtgactat tccttagtgt taagcctgac catcctggtt
     3001 ggtgctttaa ccattttgtt taatgccatt gtcgatgtgc tatatgcggt tatcgacccg
     3061 aaaatccgtt actgatactg gagctcgcga tgatgttaag taagaaaaac agcgagacgc
     3121 tggaaaattt cagtgaaaag ctggaggtcg aagggcgcag cttgtggcag gacgcacgtc
     3181 gacgttttat tcataaccgt gcggcggttg ccagtctgat ggtgctggtg ctgatcgcgt
     3241 tatttgtaat cctggcaccg atgctttccc agtttgccta tgacgatact gactgggcga
     3301 tgatgtccag cgccccggat atggagtccg gtcactactt tggtactgac tcatccggtc
     3361 gcgacctgct tgtgcgcgtt gcgattggtg ggcgtatctc actcatggtc ggtgttgctg
     3421 cggcactggt ggctgtggtc gtcgggacac tttatggttc gctttccggt tatctgggcg
     3481 gtaaagtgga ttcggtaatg atgcgtctgc tggaaatcct caactccttc ccattcatgt
     3541 tcttcgtcat tttgctggtg acctttttcg gtcaaaacat cctgctgatt ttcgtggcga
     3601 taggcatggt ttcctggctg gatatggctc gtattgtgcg tgggcaaacc ctgagtctga
     3661 agcgcaaaga gtttattgag gcggcacaag ttggcggtgt atcgacatcg ggcattgtta
     3721 ttcgccacat tgtgccgaat gtactcggtg tggtggtggt ctacgcatca cttctggtgc
     3781 ccagcatgat cctctttgaa tctttcctta gcttcctggg gttgggtacg caagagccgt
     3841 taagcagctg gggtgcattg ctgagtgatg gcgcgaactc gatggaagtc tctccatggt
     3901 tattgttgtt cccagcggga ttcctcgtgg tgacgctgtt ttgtttcaac tttatcggcg
     3961 atggcttgcg tgatgccctc gacccgaaag atcgttaagg agtgcagcca tgagcgtaat
     4021 tgaaactgca actgtgccgc tcgcacaaca acaggctgac gcactgctga acgtgaaaga
     4081 tttgcgtgtc acctttagta ccccggacgg cgacgtcacg gcggtcaatg atttgaattt
     4141 ttccctacgt gccggagaaa cgctgggtat tgtaggtgag tctggttcgg gtaaatcgca
     4201 aactgcattt gcgttgatgg gcctgttggc tgccaacgga cgtattggcg gatcggcaac
     4261 cttcaatggg cgtgaaatcc tcaatttgcc agagcatgaa ctcaataaac tgcgcgctga
     4321 acaaatctca atgatttttc aggacccaat gacttcgttg aatccctata tgcgcgtcgg
     4381 tgagcagttg atggaagtgc tgatgctgca taagaacatg agcaaagctg aggcgtttga
     4441 agagtcggtg cggatgctcg atgcggtaaa aatgccggaa gcacgtaaac gcatgaaaat
     4501 gtacccgcac gagttttctg gtggcatgcg tcagcgagtt atgattgcga tggcattgct
     4561 atgtcgacct aagctgctga ttgcggatga acccactaca gcgctggacg tcaccgtaca
     4621 ggcgcagatc atgacgctat taaatgaact gaaacgggaa tttaataccg ccatcattat
     4681 gattacccac gatcttggcg tggtggcggg gatctgtgac aaagtgctgg taatgtacgc
     4741 cgggcgcacg atggaatatg gcaacgcgcg cgatgtcttt tatcaacccg ttcatcctta
     4801 ttctatcggt ttgctcaacg cggtgccgcg tctcgatgcg gaaggtgaaa caatgttgac
     4861 catcccgggt aatccgccaa acctgctgcg attaccgaaa ggttgcccgt tccagccacg
     4921 ttgtccgcat gcgatggaaa tttgtagtag cgcaccgccg ctggaagagt ttacgcctgg
     4981 ccgtctgtgt gcttgcttta aaccggtgga ggaactgtta tgaatgctgt aaccgaagga
     5041 agaaaagtcc tccttgaaat cgccgatctg aaagtgcact ttgaaatcaa agatggcaaa
     5101 cagtggttct ggcaaccgcc gaaaacgctc aaagccgtcg atggtgtcac gcttcgcctg
     5161 tatgaagggg aaacattagg tgtggtaggg gaatcgggat gcggtaagtc cacctttgct
     5221 cgcgccatca ttggcctggt taaagcgacc gacggtcatg ttgcctggtt aggtaaagag
     5281 ttgctgggca ttaagcccga tgaatggcgt gccgttcgca gtgatattca gatgattttc
     5341 caggatccat tggcatcgct aaacccgcgc atgaccatcg gcgagatcat cgctgaacca
     5401 ctgcgtactt atcatccgaa aatgtcacgt caggaagttc gcgagcgcgt gaaggcgatg
     5461 atgctgaaag tcgggttatt gcctaacctg attaaccgct atccgcatga gttctccggt
     5521 gggcagtgcc agcgtatcgg gattgctcgt gctcttattc ttgaaccgaa gctgattatc
     5581 tgtgatgagc cggtgtcggc gctggacgtg tcaattcagg cgcaggtggt caacctgctc
     5641 cagcagctgc aacgtgagat gggattgtca ttaattttta ttgctcatga cctggccgtg
     5701 gtaaaacaca tttccgatcg tgtgttggtg atgtatctcg gccatgcggt agaactgggg
     5761 acctatgatg aggtctacca caatccacta catccttaca ccagggcatt gatgtcggca
     5821 gtccccatac ctgatccgga tctggagaag aacaaaacta tccagttact ggaaggggaa
     5881 ttaccgtcgc cgatcaaccc gccttccggt tgtgttttcc gtacccgttg cccgattgcc
     5941 ggtccggagt gcgccaaaac acgtcctgtg ctggaaggga gtttcagaca cgccgtttct
     6001 tgcctgaaag tcgatccgct ttaaacacaa taagggctga cagttgtcag ccctttttca
     6061 cgccgaaagc gattatttat tcccgccaga tgatatggca aagtttgtga tctttttcgc
     6121 ggcataacag aatgcgggcg aaaacatcgt tgatttcacc atcctcactg tccgccagac
     6181 caatcaccac ttcggcaaaa aagtccgggt tcaaatcgaa atcaacatgt tcctgccagt
     6241 cttccgccgg atcgaataac tccgcgccgc cgcgctcttc aaactgaaga ttgaacagca
     6301 gaacatcagc tgggtcgaga ttgtcggcag ccagttcgag aaaaatatcg taggcctgct
     6361 caagcgtttc atcttcagtc aggcgattgt ttagatccat atccatagtc actacctgtt
     6421 taacctctgt tggagatgtt ttacagcaac gggctgaaga agtaaaacag tcgctcggcg
     6481 acacgatgcc ataatggacg ttttagccat aaacgggcat cgagcagacg tgaacgcgaa
     6541 atataatcgt cctgaacggc ggcaaggtct gcaccaaaac ctttatcgtc gattgccagg
     6601 gtaatctcga aattcagcca cagactacgc atatcaaggt taacggtgcc aaccagactt
     6661 agttcgccat cgaccagcac gctcttggta tgcagtaacc cgccttcaaa ctgataaatt
     6721 ttaaccccag cagcaagaag ttccgtaaag aatgcgcgac tggcccagcc gaccagcatc
     6781 gagtcatttt ttcgcggaag gataatactg acatccaccc cgcgctgtgc cgccgtgcaa
     6841 atcgcatgaa gtaaatcatc gcttggcaca aagtagggcg tggtcatgat caaatattca
     6901 cgcgccgaat aagccgcagt caataatgcc tggtgaatga gatcttccgg aaagccgggg
     6961 ccagaagcaa ttgtgtgaat ggtgtgaccg ctggcctgtt caaacggcat aatattgaca
     7021 tctggtggtg gcggcagaat acgttttccg gtttcaatct cccagtcgca ggaataaata
     7081 atccccatcg cggtggcgat ggggccttcc atacgcgcca tcagatcaat ccattgccct
     7141 acgcccgcat cttgtttgaa gtagcgagga tcgaccatat tcatgctgcc ggtgtacgcg
     7201 atgtaattat cgatcatgat catcttgcga tgttggcgca ggtccatacg gcgtaaaaac
     7261 acacgcatca gattgacctt taaggcttcg accacttcaa taccggcatt acgcattagc
     7321 tcgggccacg ggctgcggaa aaaagccaca ctcccggcgg agtcgagcat caatcggcaa
     7381 tgaatgccgc gtcgcgcagc ggccattaat gattcagcca cctggtccgc catgccgccg
     7441 ggctgccaga tataaaacac aatctcaata ttatggcgcg cgagctggat gtcgcggatt
     7501 aacgcctgca tcacatcatc tgactcggtc atcagttgta gctgattccc tttgacccca
     7561 gcgatcccct gacgacgctc gcaaagcttg aataatggcg cagcgacact gctattttct
     7621 tcggcgaaga tatgcttaca ggctttaagg tcgttaagcc attttgcggt ggaaggccac
     7681 atcgctctgg cgcgctcagc gcggcgtttg cctaaatgga gctcgccaac ggcaagatag
     7741 gcaataattc cgactaacgg cagaatgtaa ataatcaaca gccaggccat cgcggaggga
     7801 actgcgcgtc gtttcattag aatgcgtaaa gttacgcctg caatgagcaa ccagtatccc
     7861 agaatggcca accaactcac caacgtataa acggttgtca tagatcagaa atccttttga
     7921 aagcgcattg ttatgagttt acgcatatgg attcatctgg caaataaaaa cgcgggaaaa
     7981 gcactggtca gcgtcggggg cgggggtata atgaccattc tgttattgca tagagtagtt
     8041 aacatgaagc ggagtagaac ggaagtgggg cgctggcgca tgcagcgtca ggctagccga
     8101 cgtaaatcgc gttggcttga ggggcaatcg cgccgaaata tgcgtatcca cagcatcagg
     8161 aagtgcattc taaacaaaca gcgtaactcg ttattgtttg cgatctacaa tatctaaatg
     8221 tactgggcac cattgcggtg cccaataagt ttactcctct atctttaaac tctatttttg
     8281 cgccgattct ttactgtcag ctttcgtttc ttgttcatcg ttatcgctga aaatgccatg
     8341 accggagttc aacaacattg aaacgagcat atcattatta atctcttcac catttaaaac
     8401 tcgcgccaga atttcgctgc caaacagttg cggtgagaga atgatatccg gatgtaccat
     8461 cttaatctta ttcaggtttt tgctatcact gacggcgaga actgttttga catcactgct
     8521 catatctttt gccgagagta caacaaacgc gttatctgca tcgttatcac tcagcgccag
     8581 aatggcctgg caacgatcga ttcccgcttt ctttaatact gaactgtcat tactgtcacc
     8641 ggggataaca tcagcgttat cgcctaagcg ttgctcaagt tgcttgatat catcttcagg
     8701 caagttgctg ataaccgtta cgttttgtcc gcgttgattc agttgcagaa tcgtattgat
     8761 ggcgagaatc gaatgtccgc aaacaataaa atgatcttta cgatgcattg tatgattgtt
     8821 tccttttaca agtttgttga atcccccgcg gataagcgga ccaaaaattg aggtcataga
     8881 tgtggcaaaa acggtaatac cggaaataat gaccgaaata gtgaacaatc gtgctgattc
     8941 agaaacaggg acaatatcgc catagccgac ggttgacatg gtttctatcg aaaaatagaa
     9001 cgcggtcatc aaactttcta ttcgcggatt aaaaccttcg cttaaataaa gcgcaccgta
     9061 ggttgagtaa aacagtaatg tcgtgaaact aataaatgca aaaattgtcc cggctgcggc
     9121 gctactgtgg gagaagtctt tgcgcagtat cagcaaaaac accagcgtaa aaatgcaaaa
     9181 tccaatacta aatttcaacc agggataaaa atgcagggta taaattagcg ctatcaacaa
     9241 caaaatgata ctgattgccc atgcgagctt tgcccggaac agtaagccaa tggagttcag
     9301 gacaagaaag acgccgagca taaatagtgg ggcgtttgcc agcaaggaga gatccaactc
     9361 tgaaaatgct ttgatatgga aaatatctag caaattgacc gacataccat agattgtttt
     9421 aaaaataagc aatccattta aaaagacggc cagcgcgaga atgtcgtgcc gtagggtcac
     9481 ccataaattt gttgctgttt gtttgaatgt agcccagtga ctcactgata cctctgtaac
     9541 cacaattttg tttaattatc ttagcgtgca cattttctga acatacatgc agcgcgtgaa
     9601 tgtgttaaac aatagtagat gactttatcc gcagtaatca aaggttttga gcgagcaact
     9661 gtacctcagg aaaggtcatt tttcctgaat atgctcacat catataaaga aatacagata
     9721 aagttattat ctgcttgtgg tggtgaatgc actgaccggc tataaggaaa ggccaaacaa
     9781 gaacacggtt gcaaaaaccg tgcccttaaa tattgaatct ctattcagaa cactttctta
     9841 aatggtttca ctgaaacgtg ttcatagact cctgccgcta cgtacgggtc agcatcggcc
     9901 caggcctgag ctgcttccag cgattcaaat tcagcaataa cggttgagcc agtaaatccc
     9961 gcagcccctg gatcgttact gtctaccgct ggcattggac cagctgtcaa caaacgacct
    10021 tcatcatgca gtaactgtaa acgtgctaaa tgtgccggac gaacggaaag gcgtttttcg
    10081 aggctatcag ctttgtcttg agcgtaaata acatacaaca cgggcacaac tccttgttcg
    10141 ggaaagttgt aaagtacgtt atttgaaagg gcgaagatct gcaacggaaa gatgatgtct
    10201 ttgttaagac catgtataaa gtaaggttaa ttacggcaaa aatgacattt tcactgatcc
    10261 tgatcgtctt accttattga atatgattgc tatttgcatt taaaatcgag gcttggtttt
    10321 tctactgaaa tgattatgac ttcaatgacc cttgatttac ctcgccgctt cccctggccg
    10381 acgttacttt cggtctgcat tcatggtgct gttgtggcgg gtctgctcta tacctcggta
    10441 catcaggtta ttgaactacc tgcgcctgcg cagccaattt ctgtcacgat ggttgcgcct
    10501 gctgatctcg aaccgccaca agccgttcag ccgccatcgg agccggtggt agagccagaa
    10561 ccggaacctg agccgatccc cgaaccgcca aaagaagcac cggtggtcat tgaaaagccg
    10621 aagccgaaac ctaagccaaa accgaagccg gtgaaaaagg tacaggagca gccaaaacgc
    10681 gatatcaaac ccgtagagtc gcgtccggca tcaccgtttg aaaatacggc accggcacgc
    10741 ctgatatcaa gtacagcaac ggctgcaacc agcaagccgg ttaccagtgt ggcttcaggg
    10801 ccacgcgcat taagccgtaa tcagccgcag tatccggcac gagcacaggc attgcgcatt
    10861 gaagggcagg ttaaagttaa atttgacgtc acgccggatg gtcgcgtgga taacgtacaa
    10921 atcctctcag ccaagcctgc gaacatgttt gagcgtgagg tgaaaaatgc gatgcgcaga
    10981 tggcgttatg agccgggtaa gccaggcagt gagattgtgg tgaatatcct gtttaaaatt
    11041 aacggcacca ccgaaattca gtaagcagaa agtcaaaagc ctccgaccgg aggcttttga
    11101 ctattactca acaggtaagg tgcgaggttt tccttcagga tcaaccgcga catacttaaa
    11161 taatgcttct gtcgctttat agcgttgccc gattggttca gacgctactt ttttcaccca
    11221 cacttcaata ttaatgctga ccgatgtcgt ccctttctgg acacagcgtg catagcagca
    11281 caccacatcg ccgaccgcaa ccggccgtaa gaaagtcatt ccttcaaccc gcacggtcac
    11341 tacgcgaccg tgggcaattt ctttcgccag aatagcgccg ccaatatcca tttgtgacat
    11401 taaccaacca ccaaagatgt caccattggc attggtatcg gcgggcatgg ctaaagtacg
    11461 taaaacaaga tcgccctgag ggacgttatg tgttgtagac atggtaaaac cgacttaaaa
    11521 ggaaaatcac aggcgcgatg ctactatgat tttcctgagg agaacagagg agatacagcg
    11581 ccagccccga aggactggca gtctggttag gatttatctt cctgcggcat gtggcggtag
    11641 atatagatac cgcttaacaa tgtgaagatt aaggtaaggg cggtcagtcc aaagacttta
    11701 aagttgaccc aaatattttg cggcagccag aatgcgatgt agatgtttgc cagaccgcaa
    11761 aggataaaga aaacagccca ggccagattc agcttcgacc ataccggttg cggcagcgtg
    11821 agttctttac ccagcatccg ctgaattagc ggctttttca tcacccattg gctgactaac
    11881 agggctcccg caaacagagc ataaatgact gtaaccttcc atttaataaa ctcatcattg
    11941 tggaagaaca gcgtcaagcc accgaagacg accaccagaa caaaagtgat cagggccatc
    12001 ttctcaacct tacgaaagcg aacccagcta tagataagca caatcgccgt ggcgacgatc
    12061 agcgccgcag tagccgcata gatgtcataa atcttgtaaa acgcgaaaaa gacaaccagc
    12121 ggtaaaaaat caagaaactg cttcatttta cgattccgta atcaaatgct taaggttatt
    12181 ggcgaatcaa catatacaga cggaacagat agatgagcaa tacggctgaa atcaggttgc
    12241 tcaaggtgtt cgccagtacg gcaccaattt ccggggttaa tgcggcaaaa gaagaggcaa
    12301 aaagcagcaa cagtgttttt gccagcaacc agctcagtac tgcgggtgcc accagacgca
    12361 tattcgccca agtcagccgc atactgctac gcatcgaggc aaaaatgccc attttgtcct
    12421 gtaccagcat caccggtgcc agggccagta aaatggccat gataattccc ggaacgacca
    12481 ctagcatgat gccaatctgt actaaaaggg tagtcagaaa aatcagaata aataactttg
    12541 gcaatatcgg cgcactggca ccaatagctc gcagcgcact gactctctga cccgcagaca
    12601 ccagctggat aattaatatt acgcctccgg cgagaatggc gttaccgatt aatcctgaaa
    12661 aagtggacgc cgctgaagcc tgcagcaaaa tttgttgctg ttccggtgac atattctgaa
    12721 ccaggtcgaa caacccacta ctgccgctaa cgggcacgcc gtcattgagc tgcgcaagct
    12781 gtgcatcact gggtgagaaa acatgcccta acaccactgt gataaacgca catagcaacg
    12841 ataccaacag aatggtcata aattgattac ggaagaaatt tccggtgtca cggtatacgg
    12901 actgcgccgt gatagacatg cactctcctt gagttttatg caggtgttaa ttagcgggca
    12961 attgtaccct ggttaagcct cgggtggcag catcaggtct tgtatggaaa agcatatctt
    13021 tgtaaagcgg aggtaattgc tggccttcag gcgtgggcaa accgcggcaa gtggcgatcg
    13081 agttaatatt tgcgtagcga aaatatttaa aaattgattt aaatcacgtt aaccaggatt
    13141 ctcaatgcaa cttctaaatt aatccagatc aataaagggt gaattatcat atgtaatgtg
    13201 atctatgtag gatcatttgt tactccaatg taggtatatt cgtcacgttt ttataaccat
    13261 aacgacggag cggatatgaa aaagttaaca gtggcggctt tggcagtaac aactcttctc
    13321 tctggcagtg cctttgcgca tgaagcaggc gaatttttta tgcgtgcagg ttctgcaacc
    13381 gtacgtccaa cagaaggtgc tggtggtacg ttaggaagtc tgggtggatt cagcgtgacc
    13441 aataacactc aactgggctt gacgtttact tatatggcga ccgacaacat tggtgtggaa
    13501 ttactggcag cgacgccgtt ccgccataaa atcggcaccc gggcgaccgg cgatattgca
    13561 accgttcacc atctgccacc aacactgatg gcgcagtggt attttggtga tgccagcagc
    13621 aaattccgtc cttacgttgg ggcaggtatt aactacacca ccttctttga taatggattt
    13681 aacgatcatg gcaaagaggc agggctttcc gatctcagtc tgaaagattc ctggggagct
    13741 gccgggcagg tgggggttga ttatctgatt aaccgtgact ggttggttaa catgtcagtc
    13801 tggtacatgg atatcgatac caccgccaat tataagctgg gcggtgcaca gcaacatgat
    13861 agcgtacgcc tcgatccgtg ggtgtttatg ttctcagcag gatatcgttt ttaattccgc
    13921 acaaaaacga ccccgtaata tacggggtca ataaggacat ggca
//
LOCUS       DADMHC010000101        13875 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.101, whole genome shotgun sequence.
ACCESSION   DADMHC010000101 DADMHC010000000
VERSION     DADMHC010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13875)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13875)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13875
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.101"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..401
                     /locus_tag="JNZ57_002465"
     CDS             <1..401
                     /locus_tag="JNZ57_002465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8828660.1"
                     /translation="ATITAAIIYLYPSPLVCNAGAFVIGFSAAGGILQLGVSVMSEFF
                     PKSKAKVTSIYMMMGGLANFVIPLITGYLSNIGLQYIIVLDFTFALLALITAIIVFIR
                     YYRVFIIPENDVRFGERKFSTRLNTIKHRG"
     gene            413..1279
                     /gene="ydiB"
                     /locus_tag="JNZ57_002466"
     CDS             413..1279
                     /gene="ydiB"
                     /locus_tag="JNZ57_002466"
                     /EC_number="1.1.1.282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinate/shikimate dehydrogenase"
                     /protein_id="HAY8828661.1"
                     /translation="MDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEV
                     DNDSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDELTPAAKLVGAINTIVNDDGYLR
                     GYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEF
                     FDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVN
                     DISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFP
                     LEYVKQVMGFGA"
     gene            1311..2069
                     /gene="aroD"
                     /locus_tag="JNZ57_002467"
     CDS             1311..2069
                     /gene="aroD"
                     /locus_tag="JNZ57_002467"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HAY8828662.1"
                     /translation="MKTVTVKDLVIGTGAPKIIVSLMAKDIARVKSEALAYREADFDI
                     LEWRVDHFADLSNVESVMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNR
                     AAIDSGLVDMIDLELFTGDDQVKEAVACAHAHDVKVVMSNHDFHKTPEAEEIIARLRK
                     MQSFNADIPKIALMPQSTSDVLTLLAATLEMQKQYADRPIITMSMAKTGVISRLAGEV
                     FGSAATFGAVKKASAPGQISVNDLRTVLTILHQA"
     gene            2215..3810
                     /locus_tag="JNZ57_002468"
     CDS             2215..3810
                     /locus_tag="JNZ57_002468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl CoA:acetate/3-ketoacid CoA transferase"
                     /protein_id="HAY8828663.1"
                     /translation="MKPVKPPRINGRVPVLSAQEAVNYIPDEATLCVLGAGGGILEAT
                     TLITALADKYKQTQTPRNLSIISPTGLGDRADRGISPLAQEGLVKWALCGHWGQSPRI
                     SELAEQNKIIAYNYPQGVLTQTLRAAAAHQPGIISDIGIGTFVDPRQQGGKLNEVTKE
                     DLIKLVEFDNKEYLYYKAIAPDIAFIRATTCDSEGYATFEDEVMYLDALVIAQAVHNN
                     GGIVMMQVQKMVKKATLHPKSVRIPGYLVDIVVVDPDQSQLYGGAPVNRFISGDFTLD
                     DSTKLSLPLNQRKLVARRALFEMRKGAVGNVGVDIADGIGLVAREEGCADDFILTVET
                     GPIGGITSQGIAFGANVNTRAILDMTSQFDFYHGGGLDVCYLSFAEVDQHGNVGVHKF
                     NGKIMGTGGFIDISATSKKIIFCGTLTAGSLKTEIADGKLNIVQEGRVKKFIQELPEI
                     TFSGKIALERELDVRYITERAVFTLKEDGLHLIEIAPSVDLQKDILDKMDFTPVISPE
                     LKLMDERLFIDAAMGFVLPEAAH"
     gene            3824..4975
                     /locus_tag="JNZ57_002469"
     CDS             3824..4975
                     /locus_tag="JNZ57_002469"
                     /EC_number="1.3.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310429.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HAY8828664.1"
                     /translation="MDFSLTEEQELLLASIRELITTNFAEEYFRTCDQNGTYPREFMR
                     ALADNGISMLGVPEEFGGIPADYVTQMLALMEVSKCGAPAFLITNGQCIHSMRRFGSA
                     EQLRKTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVYINGQKTFITGAK
                     EYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPLHKIGWHMLSTCEVYLDNVEV
                     EESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARYANQRIAFGKPIGH
                     NQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALAKLYCARTAMEVIDDAI
                     QIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQILKDYQNK"
     gene            complement(5018..5929)
                     /locus_tag="JNZ57_002470"
     CDS             complement(5018..5929)
                     /locus_tag="JNZ57_002470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HAY8828665.1"
                     /translation="MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNET
                     ELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ
                     GAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL
                     YYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFT
                     KEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPS
                     DYRRQFKNCFAEQEILSEFPQPVSLVG"
     gene            6245..7009
                     /locus_tag="JNZ57_002471"
     CDS             6245..7009
                     /locus_tag="JNZ57_002471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein"
                     /protein_id="HAY8828666.1"
                     /translation="MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEAA
                     SQLATDDDEIAALTVGGLLLQNSKVRKDVLSRGPHSLYLVQDAQLEHALPLDTAKALA
                     AAIEKIGFDLLIFGEGSGDLYAQQVGLLVGEILQLPVINAVSAIQRQGNTLVIERTLE
                     DDVEVIELSVPAVLCVTSDINVPRIPSMKAILGAGKKPVNQWQASDIDWSQSAPLAEL
                     VGIRVPPQTERKHIIIDNDSPEAITELAEHLKKALN"
     gene            7029..7967
                     /locus_tag="JNZ57_002472"
     CDS             7029..7967
                     /locus_tag="JNZ57_002472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit alpha"
                     /protein_id="HAY8828667.1"
                     /translation="MSQLNSVWVFSDNPERYAELFGGAQQWGQQVYAIVQNTDQAQAV
                     MPYGPKCIYVLEQNDALQRTENYAESIAAPLKDKHPAMLLLAATKRGKALAARLSVQL
                     NAALVNDATAVDIVDGHICAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTSDTSH
                     KCPTETVPYVAPRHEILCRERRAKAASSVDLSKAKRVVGVGHGLAAQDDLKMVHELAA
                     VLNAEVGCSRPIAEGENWMERERYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVI
                     VAINKDKNAPIFNYADYGLVGDIYKVVPALISQLSR"
     gene            8023..9312
                     /locus_tag="JNZ57_002473"
     CDS             8023..9312
                     /locus_tag="JNZ57_002473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HAY8828668.1"
                     /translation="MSDNKFDAIVVGADVAGSVAALVMARAGLDVLVIERGDSAGCKN
                     MTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHAS
                     YTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILQANVVVLAD
                     GVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSD
                     GLMGGGFLYTNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEY
                     SAHMVPEGGLAMVPQMVNDGVMIVGDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAA
                     KEREDFSASSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYPRMVADIMNEMF
                     TIDGKPNQPVRKMIMGHAKKIGLINLLKDGIKGATAL"
     gene            9309..9602
                     /locus_tag="JNZ57_002474"
     CDS             9309..9602
                     /locus_tag="JNZ57_002474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HAY8828669.1"
                     /translation="MSQNATVNVDIKLGVNKFHVDEGHPHIILAANPDINEFRKLMKA
                     CPAGLYKQDDAGNIHFDSAGCLECGTCRVLCGNTILEQWQYPVGTFGIDFRYG"
     gene            9605..11305
                     /gene="fadK"
                     /locus_tag="JNZ57_002475"
     CDS             9605..11305
                     /gene="fadK"
                     /locus_tag="JNZ57_002475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416216.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="medium-chain fatty-acid--CoA ligase"
                     /protein_id="HAY8828670.1"
                     /translation="MHPTGPHLGPDVLFRESKMKVTLTFNEQRRAAYRQQGLWGDASL
                     ADYWQQTARAMPDKIAVVDNHGATYTYSALDHALSCLANWMLAKGIESGDRIAFQLPG
                     WCEFTVIYLACLKIGAVSVPLLPSWREAELVSVLNKCQAKMFFAPTLFKQTRPVDLIL
                     PLQNQLPQLQQIVGVDKLAPATSSLSLSPIIADNTSLTTAITTHGDELAAVLFTSGTE
                     GLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARS
                     VLLDIFTPDACLALLEQQRCTCMLGATPFVYDLLNVLEKQPADLSALRFFLCGGTTIP
                     KKVARECQQRGIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDDAR
                     KTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWYCSGDLCRMDEAGYIKITGR
                     KKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHHSLS
                     LEEVVAFFSRKRVAKYKYPEHIVVIEKLPRTASGKIQKFLLRKDIMRRLTQDVCEEIE
                     "
     gene            complement(11362..13740)
                     /gene="ppsA"
                     /locus_tag="JNZ57_002476"
     CDS             complement(11362..13740)
                     /gene="ppsA"
                     /locus_tag="JNZ57_002476"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000069371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HAY8828671.1"
                     /translation="MSNNGSSPLVLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVS
                     VPNGFATTADAFNQFLDQSGVNQRIYELLDKTDIDDVTQLAKAGAQIRQWIIDTPFQA
                     ELENAIREAYAQLSADDENASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLVAV
                     KHVFASLFNDRAISYRVHQGYDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQV
                     VFITSAWGLGEMVVQGAVNPDEFYVHKPTLAANRPAIVRRTMGSKKIRMVYAPTQEHG
                     KQVKIEDVPQEQRDIFSLTNEEVQELAKQAVQIEKHYGRPMDIEWAKDGHTGKLFIVQ
                     ARPETVRSRGQVMERYTLHSQGKIIAEGRAIGHRIGAGPVKVIHDISEMNRIEPGDVL
                     VTDMTDPDWEPIMKKASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATERMKDGENV
                     TVSCAEGDTGYVYAELLEFSVKSSSVETMPDLPLKVMMNVGNPDRAFDFACLPNKGVG
                     LARLEFIINRMIGVHPRALLEFDDQEPQLQNEIREMMKGFDSPREFYVGRLTEGIATL
                     GAAFYPKRVIVRLSDFKSNEYANLVGGERYEPDEENPMLGFRGAGRYVSDSFRDCFAL
                     ECEAVKRVRNDMGLTNVEIMIPFVRTVDQAKAVVEELARQGLKRGENGLKIIMMCEIP
                     SNALLAEQFLEYFDGFSIGSNDMTQLALGLDRDSGVVSELFDERNDAVKALLSMAIRA
                     AKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSLSLNPDTVVQTWLSLAELKK"
BASE COUNT         3538 a         3427 c         3522 g         3388 t
ORIGIN      
        1 tggcaacaat aacagcagcc attatctatc tgtacccttc tccactggtg tgtaatgccg
       61 gcgcctttgt tatcggtttc tcagcagctg gcggcatttt acagctcggt gtttcggtca
      121 tgtcagagtt tttcccaaaa agcaaagcca aagtcaccag tatttatatg atgatgggtg
      181 gactggctaa ctttgttatt ccgctgatta ccggttatct gtcgaacatc ggccttcaat
      241 atatcattgt tctcgatttt actttcgcgc tgctggccct gattaccgca attattgttt
      301 ttatccgcta ttaccgcgtt tttattattc ctgagaatga tgtgcggttt ggcgagcgta
      361 aatttagcac ccggttaaac acaattaagc atagaggtta aaggagttaa ttatggatgt
      421 taccgcaaaa tacgaattga ttgggctgat ggcctatcct atccgccaca gtttatcgcc
      481 tgaaatgcag aataaagcct tagaaaaagc gggattgcca tttacctata tggcctttga
      541 agtggataac gatagttttc ccggagcaat tgaaggatta aaagctctaa aaatgcgcgg
      601 aactggtgta tcaatgccga acaaacaact ggcttgtgaa tatgttgatg aattaacgcc
      661 agcagccaaa ctggtgggtg ccatcaacac catcgttaat gatgatggct acctgcgcgg
      721 ctataacacc gacggcacgg gccatattcg cgccattaaa gagagcggtt ttgatatcaa
      781 aggcaaaaca atggtgctgt taggggccgg aggtgcctca acggcgattg gcgcgcaggg
      841 ggcaattgaa ggtttaaaag aaattaaact ctttaaccgt cgggatgagt tcttcgataa
      901 agccctcgcc ttcgcgcagc gggttaacga aaacaccgat tgtgtcgtca cggttaccga
      961 tctcgccgat cagcaagcct ttgctgaagc cctggcttcc gccgacattt taaccaatgg
     1021 cacaaaagtg ggtatgaaac cccttgagaa tgaatcatta gttaatgata tcagtctgtt
     1081 acatccggga cttctggtca ctgaatgcgt gtataacccg catatgacga agttattgca
     1141 gcaggcgcaa caagctggtt gcaaaacgat tgatggatac ggcatgttgt tgtggcaagg
     1201 ggctgaacag ttcacgttat ggactggcaa agatttccct ctggaatatg ttaaacaggt
     1261 catggggttc ggtgcctgac aggctgaccg cgtgcagaaa gggtaaaaaa atgaaaaccg
     1321 taactgtaaa agatctcgtc attggtacgg gcgcacctaa aatcatcgtc tcgctgatgg
     1381 cgaaagatat cgcccgcgtg aaatccgaag ctctcgccta tcgtgaagcg gactttgata
     1441 ttctggaatg gcgtgtggac cactttgccg acctctccaa tgtggagtct gtcatggcgg
     1501 cggcaaaaat tctccgcgaa accatgccag aaaaaccgct gctgtttacc ttccgcagtg
     1561 ccaaagaagg cggcgagcag gcgatttcca ccgaggctta tattgctctc aatcgtgcag
     1621 ccatcgacag cggcctggtt gatatgatag atctggagtt atttaccggc gatgatcagg
     1681 ttaaagaagc cgtcgcctgc gcccacgcgc atgatgtgaa agttgtcatg tccaaccatg
     1741 acttccataa aacgccggaa gccgaagaaa tcattgcccg tctgcgcaaa atgcagtcct
     1801 tcaacgccga tattcctaag attgcgctga tgccgcaaag taccagcgat gtgctgacgt
     1861 tgcttgccgc gaccctggag atgcagaagc agtatgccga tcgtccaatc atcacaatgt
     1921 caatggcaaa aactggcgta atttctcgtc tggctggtga agtatttggc tcggcggcaa
     1981 cttttggtgc ggtaaaaaaa gcctctgcgc cagggcaaat ctcggtaaat gatttacgca
     2041 cagtattaac tattttacat caggcataag caataatatt tcggcgggaa tatcctcccc
     2101 cgccgaacta aaaaaaatat attcaaccgt atttaataaa aatatttcgt gagtctctgt
     2161 gcgctaaata tccatctggc gtagggaaaa tcacacctga atcaggaatt aacaatgaaa
     2221 cctgtaaaac cacctcgtat taatggacga gtgccggtcc tgtcggcaca ggaagcggtg
     2281 aattatattc ccgacgaagc aacactttgt gtgttaggcg ctggcggcgg tattctggaa
     2341 gccacgacgt taattactgc tcttgctgat aaatataaac agactcaaac gccacgtaat
     2401 ttatcgatta ttagtccaac agggcttggc gatcgcgccg accgtggtat tagtccgctg
     2461 gcgcaagaag gtctggtgaa atgggcatta tgtggtcact ggggacaatc gccgcgtatt
     2521 tctgaactcg cagaacaaaa taaaattatt gcttataact atccacaagg tgtacttaca
     2581 caaaccttac gcgccgccgc agcccaccag cctggtatta ttagtgatat tggcatcggg
     2641 acatttgtcg atccacgcca gcaaggcggc aaactgaatg aagtcacgaa agaagacctg
     2701 attaaactgg tcgagtttga taacaaagaa tatctctatt acaaagcgat tgcgccagat
     2761 atcgccttca ttcgcgctac cacctgcgac agtgaaggct acgccacttt tgaagatgag
     2821 gtgatgtatc tcgacgcatt ggttattgcc caggcggtgc acaataacgg cggtattgtg
     2881 atgatgcagg tgcagaaaat ggttaagaaa gccacgctgc atcctaaatc tgtccgtatt
     2941 ccgggttatc tggtggatat tgtggtggtc gatccggatc aaagccaact gtatggcggt
     3001 gcgccggtta accgctttat ttctggtgac ttcactcttg atgacagcac caaacttagc
     3061 ctgcccctaa accaacgtaa attagttgcg aggcgtgcat tattcgaaat gcgtaaaggc
     3121 gcggtgggga atgtcggcgt cgatattgct gacggtattg gcctggtcgc ccgggaagaa
     3181 ggttgtgctg atgactttat tctgacggta gaaacaggtc cgattggcgg aattacttca
     3241 caggggatcg cctttggcgc gaacgtgaat acccgtgcca ttctggatat gacgtcccag
     3301 tttgattttt atcacggtgg tggtctggat gtttgttatt tgagttttgc tgaagtcgac
     3361 cagcacggta acgtcggcgt gcataaattc aatggcaaaa tcatgggtac cggtggattt
     3421 attgatatca gtgccacctc gaagaaaatt attttctgcg gcacgttaac cgcgggcagt
     3481 ttaaaaacag aaattgccga tggcaaatta aatatcgtcc aggaaggacg ggtgaagaaa
     3541 tttattcagg aactaccgga aattactttt agcggaaaaa tcgcgctcga acgggaactg
     3601 gatgttcgtt acatcaccga acgtgctgta ttcacgctga aagaagacgg cctgcattta
     3661 atcgaaatcg cccctagcgt cgatttacaa aaagatattc tcgacaaaat ggatttcacc
     3721 ccagtgattt cgccagaact caaactgatg gacgaaagat tatttatcga tgcggcgatg
     3781 ggttttgtcc tgcctgaagc ggctcattaa caggagtatc acgatggatt tttctttaac
     3841 tgaagaacaa gaactgctgc tggccagtat tcgcgaactg attacgacta actttgcgga
     3901 agagtatttc cgcacctgcg atcaaaacgg gacatatccg cgtgagttta tgcgggcgct
     3961 ggcggataac ggcatttcta tgcttggcgt gccggaagag ttcggtggca tccctgcgga
     4021 ttacgtcacc cagatgctgg cgctgatgga agtgtcaaaa tgcggtgctc cggcattttt
     4081 gattaccaac ggtcaatgta ttcacagtat gcgccgtttc ggttctgcag agcagctacg
     4141 taaaacggca gagagcaccc tggaaacggg tgatcccgcc tatgccctgg cgttgacgga
     4201 gccaggcgca ggctcagaca acaacagtgc cactaccact tacacgcgta aaaacggcaa
     4261 ggtttacatc aacggacaga aaacctttat taccggtgcg aaagagtacc cgtatatgct
     4321 ggtgttggcg cgcgatccgc aaccgaaaga tcccaaaaaa gccttcaccc tgtggtgggt
     4381 cgactccagt aagcccggca ttaagattaa cccgctgcat aaaatcggct ggcatatgct
     4441 cagcacctgc gaagtctatc tcgacaacgt ggaggttgaa gagagcgaca tggtgggcga
     4501 agaaggaatg ggtttcctca atgtgatgta caactttgag atggagcgcc tgatcaacgc
     4561 cgcgcgcagc accggctttg ccgaatgcgc ctttgaagat gccgcccgct atgccaacca
     4621 acgtatcgct tttggtaagc ccattggtca taaccagatg atccaggaaa aactggcgct
     4681 gatggcgatt aagatcgaca acatgcgcaa catggtgctg aaagtggcat ggcaagccga
     4741 tcagcatcag tcactgcgca ccagcgcggc gctggcaaaa ctgtattgcg cacgtaccgc
     4801 aatggaagtc attgatgatg cgattcaaat catgggcggt ctgggctata ccgatgaagc
     4861 gcgcgtctcc cgcttctggc gtgatgtccg ttgtgaacgt atcggcggcg gtacagacga
     4921 aattatgatt tacgtagcag gtcggcagat cctgaaagac tatcagaaca aataatctgc
     4981 aggcggcgca gcttcttaac aaactgcgcc gccagattta tccaacaaga cttaccggtt
     5041 gaggaaattc agataggatt tcttgttccg caaaacagtt tttaaattgt ctacggtaat
     5101 cgctgggcga acaaccgaca tggcgcaaaa acagtttggc aaagtgatcg acattttcat
     5161 aacccacacg ccaggagatc tctgcctgtg ataattcagt attagtgagt gaccattttg
     5221 cttccgtcat acgccgttga ataacatagt taatagggga aatacgatac tctttggtaa
     5281 attcatggca aatataactg acgctggcac gaaatttttt cgataactgt tctaaagtga
     5341 ttttttcgcg ataattatta ttcagataga aaagaatatc ttttatcaga acatcttttt
     5401 taatataccc ctgctccgaa cgataagcat ttttaaaatt ttcgtagtaa agaatggcta
     5461 acgtataggc aaatgcatcc cataacgaag atgtttggct atttttactt tgcggcaaaa
     5521 tcacacttag ctcattaaat aaggttttta tgacttcttt tccctgcccc gcggcaatta
     5581 ccggacaaga atgcggttgc agtagctgat tttcctcagc cccctgaaac tgaaagccgt
     5641 acagcgcaca ggtacacgtc gttgccggat cgttaacgtc agaggccacc gcatgcagcc
     5701 tgccgcgttc tatcaccaca atgtcatccg catgtgcgac atataacgaa gaatcgatgg
     5761 taaaccttgc aacccctttc ttgacgtaaa tcaactcggt ttcattgtca tgaacgtgat
     5821 gtccggactc ccattttgga tcatcgctaa atgcaaaacg tgaaagccgt ggcgttttac
     5881 cggcgacaaa cagcgtttca ctggcgttat caaaacagcg ttgatacatg acaacctccc
     5941 tattccatga gcaagcaaaa acaatatatg ccggataaaa tacggcgtgt attgcggtta
     6001 tacaaccgcg tttagcgaga gctaaacaag attatttaca ctgaatgcaa gattgtacgg
     6061 tcatggaata actatattgc cgcaaattgc acttttgttt tagcgatcgc attttttttg
     6121 caagattgtt ggcaaggaaa acagcttgct ccgtcgaaaa ccccgcaccg ctatcgcaca
     6181 ctattttcag gccattttta ccttccatcg gagatggttc cgtatgcgac tcacaggaga
     6241 aatcatgaaa ataataacct gctttaagct ggtgcctgaa gaacaggaca ttgttgtcac
     6301 tccagaatac accctgaatt tcgacaatgc cgacgccaaa atcagccagt tcgatctcaa
     6361 tgccattgaa gctgcaagcc agctcgcaac agatgacgat gagatagccg cgctgaccgt
     6421 tggcggctta ttgttgcaga actcgaaagt gcgcaaagat gtgctatccc gcgggccgca
     6481 cagcctgtat ttggtgcagg atgcgcaact tgaacatgca ctgcctctcg ataccgcaaa
     6541 agcgctggcg gcagcaattg aaaagatcgg cttcgattta ctgatctttg gtgaaggttc
     6601 cggcgacctt tatgcccagc aggttggctt gctggtcgga gaaattctgc aacttccggt
     6661 gattaatgca gtgagtgcta ttcagcgtca gggcaataca ctggtgattg aacgcacgct
     6721 tgaagatgat gttgaagtta ttgaactctc tgttccagcc gtgctctgcg tcacctccga
     6781 tattaacgtg ccacgcattc cttcgatgaa agccattctc ggcgcgggta aaaaaccggt
     6841 aaatcagtgg caggcaagtg atattgactg gagccagagc gcgccacttg ctgaactggt
     6901 cggcattcgc gtaccgccgc aaacagaacg taagcacatc attatcgata acgattcgcc
     6961 ggaggccatt accgagctgg cggaacatct gaagaaagcc ctgaactgaa gcctacggag
     7021 aagaaacgat gagtcaatta aacagcgtct gggtctttag cgataatcct gaacgttatg
     7081 ctgaactgtt tggcggcgct cagcaatggg gccaacaggt gtatgccatt gtacaaaata
     7141 ccgaccaggc gcaggcagtt atgccttatg gtccaaaatg tatttatgtt cttgagcaaa
     7201 acgacgcgct gcaacgcact gaaaattacg ccgaaagcat tgctgccccg ctgaaagata
     7261 aacaccccgc tatgttgctg ttggccgcga cgaaacgtgg taaagctctg gcagcacggt
     7321 taagtgtgca actgaatgcg gcgctggtga acgatgccac ggcggtggat attgtcgatg
     7381 gtcacatttg cgccgaacac cggatgtatg gcgggttagc gttcgctcag gaaaagatca
     7441 acagcccgct ggcgatcatt acccttgcac ccggtgttca ggaaccgtgc accagtgata
     7501 cctctcataa gtgcccgaca gaaacggtac cttatgttgc tccgcgtcat gaaattctct
     7561 gtcgcgaacg ccgtgcgaaa gccgcaagca gcgtggacct gagcaaagca aaacgtgtgg
     7621 ttggcgtcgg tcatggtctg gcggcgcagg atgacctgaa aatggtccac gaactggcgg
     7681 cggtgctgaa tgctgaagtc ggctgttcac gtccaattgc cgaaggcgag aactggatgg
     7741 agcgtgaacg ttatatcggt gtctccggcg tgttgctgaa atccgatctc tacctgacgc
     7801 tggggatctc cgggcagatc cagcatatgg ttggcggcaa cggcgcaaaa gtgattgtcg
     7861 ccatcaataa agataaaaat gcgccaatct tcaattatgc cgactacggc ctggtgggcg
     7921 atatctacaa agtcgtccct gccctgatta gccagttgag ccgctaattc ccctttcaac
     7981 cacatctccc gctgtaaacg cagcgggaag ggagcataac gcatgtcgga taacaaattt
     8041 gatgccattg tggtcggtgc ggacgttgct ggtagcgttg ccgcactggt catggcgcga
     8101 gccggactgg atgtcctggt gatagaacgc ggcgacagtg ccggatgtaa aaacatgacc
     8161 ggcgggcgtc tttatgccca cacacttgaa gcaatcattc caggctttgc agtatcagcg
     8221 ccggtagaac gcaaggtcac acgcgagaaa atctccttct taaccgaaga aagcgccgtt
     8281 accctcgatt ttcaccgcga gcaaccagat gttccgcaac acgcatctta taccgtattg
     8341 cgtaatcgtc tggacccgtg gttgatggaa caagccgagc aggcgggcgc acagtttatc
     8401 ccgggcgttc gcgtcgatgc gttggttcgt gaaggaaaca aggtcactgg cgtgcaggcc
     8461 ggggatgata ttctccaagc gaatgtggtg gttctagctg atggcgtaaa ctcgatgctt
     8521 ggccgctcgc tgggaatggt tcccgcttcc gatccgcatc attacgctgt tggtgttaaa
     8581 gaggttattg gcctcacacc agaacagatc aacgatcgct ttaatattac gggcgaggaa
     8641 ggtgccgcct ggctgtttgc cggttcccct tctgacggcc tgatgggcgg gggatttctc
     8701 tataccaaca aggattccat atccttgggg ctggtttgtg gattgggtga tatcgcccat
     8761 gcgcaaaaaa gcgtgccgca aatgctggaa gattttaaac aacaccccgc cattcgccca
     8821 ctaattagcg gcggcaaact gcttgaatat tccgcgcata tggtgccaga aggcggtctg
     8881 gcaatggtgc cgcagatggt taacgatggc gtgatgatcg ttggtgacgc cgcaggcttc
     8941 tgcctgaatt tgggttttac agttcgtggc atggatttag ccattgcatc ggctcaggct
     9001 gccgccacaa cggtgatcgc cgccaaagaa cgcgaggatt tctccgccag cagtctggcg
     9061 caatacaaac gtgagctgga acaaagctgc gtcatgcgcg atatgcagca tttccgcaag
     9121 atcccggcgc tgatggaaaa cccgcgcctg tttagccaat acccacgaat ggtcgccgac
     9181 atcatgaacg agatgttcac cattgacggc aaaccaaacc agccggtacg caaaatgatc
     9241 atgggacacg cgaagaaaat tgggctgatc aacttgctga aagatggcat taagggagca
     9301 accgcgctat gagccagaac gctacggtta acgtcgacat caaattaggc gtcaataaat
     9361 tccatgttga tgagggccac ccgcatatca ttctggcggc aaatcccgat atcaatgaat
     9421 tccgtaaatt aatgaaagct tgccctgccg gactttataa gcaggatgac gccggcaaca
     9481 ttcatttcga ttccgccggt tgtctggagt gcggcacctg tcgggtgctg tgcggcaaca
     9541 ctattctcga acagtggcaa tatcccgtag gcaccttcgg tattgatttt cgctacggct
     9601 aatcatgcat cccacaggcc cgcatctcgg gcctgatgtt ctgtttcgag agtccaaaat
     9661 gaaagtgaca ttaacgttca acgaacaacg tcgtgcggcg tatcgtcagc aagggttatg
     9721 gggcgatgct tcactggccg attactggca gcagaccgct cgtgcgatgc cagacaaaat
     9781 tgccgtggtc gacaatcatg gtgcaacgta cacctatagc gcgctcgatc acgccttgag
     9841 ctgtctggca aactggatgt tagcgaaggg tattgaatca ggcgatcgca tcgcatttca
     9901 actgcctggc tggtgtgaat ttaccgttat ctatcttgcc tgcctgaaaa tcggtgcggt
     9961 ttccgtgccg ctgttgcctt cctggcggga agcagaactg gtgtcggtgc tcaataagtg
    10021 tcaggcaaaa atgttctttg caccgacgtt gtttaaacaa acacgtccgg tagatttaat
    10081 cctgccgctg caaaatcagc ttccacaact acaacaaatt gtcggcgtgg acaaactggc
    10141 tcccgccacc tcttccctct cattaagtcc gattatcgcc gacaatacct cactgaccac
    10201 ggcgataacg acccacggcg atgaattagc tgcggtgctg tttacctccg gaaccgaggg
    10261 tctgccaaag ggcgtgatgc taacgcataa caatattctc gccagtgagc gggcttattg
    10321 cgcgcgactg aatctgacct ggcaggatgt ctttatgatg cctgcgccac ttggtcacgc
    10381 aacgggcttt ctgcatggcg taacggcacc attcttaatt ggcgctcgca gcgtgttgtt
    10441 agatattttc actcctgatg cgtgtctcgc gctgcttgag cagcagcgtt gcacctgtat
    10501 gctaggcgca acgccgtttg tctatgatct tttgaatgta ctagagaaac aacccgcgga
    10561 cctttcagcg ctgcgtttct ttctttgcgg cggtaccaca atccccaaaa aagtggcacg
    10621 tgaatgccag cagcgcggca ttaaattatt aagtgtttat ggttccacag aaagttcgcc
    10681 gcatgcggtg gtgaatctcg atgatccttt gtctcgcttt atgcacaccg atggttacgc
    10741 tgccgcaggt gtagagatta aagtggtcga tgacgcacgc aagaccttac cgccaggttg
    10801 cgaaggtgaa gaagcctcgc gtggccccaa tgtgtttatg gggtattttg atgaacctga
    10861 attaaccgcc cgtgcgctgg acgaagaagg ctggtattgc agcggcgatc tctgccgtat
    10921 ggatgaggct ggctatataa aaattaccgg acgcaaaaaa gatattattg tccgcggcgg
    10981 cgaaaatatt agcagccgtg aagtggaaga tattttattg cagcatccta aaattcacga
    11041 tgcctgtgtg gttgcaatgc ccgatgaacg tttaggtgaa cgatcatgcg cttatgtcgt
    11101 gctgaaagcg ccgcatcatt cattatcgct ggaagaggtg gtggcttttt ttagccgtaa
    11161 acgggtcgca aaatataaat atcctgaaca tatcgtggta atcgaaaaac taccgcgcac
    11221 tgcctcaggt aaaatacaaa agtttttgtt aagaaaagat attatgcggc gattaacgca
    11281 ggatgtctgt gaagagattg aataagtttc atcttcgggg atcacataaa cccggcgaca
    11341 aaacgccgcc gggtatttat tttatttctt cagttcagcc aagcttaacc aggtttgcac
    11401 cacggtgtcc ggattcagag acaggctatc gatcccctct tccatcaacc atgcggcaaa
    11461 atcttcgtgg tcggacggac cctgaccgca aatcccgaca tatttgccct gtttcttcgc
    11521 ggcacggata gccatcgaca gcaatgcttt caccgcatcg ttgcgctcat cgaacagttc
    11581 agacaccacg ccggagtcac gatccagacc gagcgccaac tgcgtcatgt cgtttgagcc
    11641 aattgagaag ccgtcgaaat attcgaggaa ctgctcggcc agcaaggcgt tggacgggat
    11701 ttcacacatc atgatgattt tcagcccgtt ctcaccacgc ttcagcccct gacgcgccag
    11761 ttcttcaacc accgctttcg cctggtctac ggtacgcacg aacgggatca tgatctcaac
    11821 gttggtcagc cccatgtcgt tgcgcacacg tttcactgct tcacactcca gcgcgaagca
    11881 gtcgcggaag ctgtcggaaa catagcggcc cgcgccacgg aagccgagca tcgggttctc
    11941 ttcatctggc tcgtaacgct caccaccgac caggttggca tattcgttcg atttaaaatc
    12001 agagagacgg acaatgacgc gcttcggata aaacgcggca cccagcgtcg cgatcccttc
    12061 agtcagacga ccaacgtaaa attcacgcgg agaatcaaaa cctttcatca tctcgcggat
    12121 ttcgttttgc aactgcggtt cctgatcgtc aaactcaagc agtgcgcgtg ggtggacgcc
    12181 aatcatacgg ttgatgataa attccagacg cgcaagtccc acgcctttgt tcggcagaca
    12241 ggcgaagtcg aaagctcgat ccgggttacc gacgttcatc ataactttca acggcagatc
    12301 cggcatggtt tctacgctgg agcttttcac gctaaattcc agcaactccg catagacgta
    12361 accggtatca ccttcggcac aagaaacagt gacgttctca ccgtctttca tccgttctgt
    12421 tgcatcacca cagcccacta ccgccggaat acccagttca cgagcgatga tcgccgcgtg
    12481 acaggtacga ccgccacggt tggtgacgat ggcagatgct ttcttcatga tcggttccca
    12541 gtccgggtcg gtcatgtcag tgaccagcac gtcaccaggt tcgatgcggt tcatttcgct
    12601 gatgtcatgg atgactttca ccggacccgc accgatgcga tgaccgatag cacggccttc
    12661 ggcgataatc ttaccctgtg aatgcagcgt ataacgctcc atgacctgac cgcgtgagcg
    12721 cacggtttcc ggacgcgcct gcacaatgaa cagtttgccg gtgtggccat ctttcgccca
    12781 ctcaatatcc atcgggcgac cgtagtgttt ctcaatttgt acggcctgtt ttgccagttc
    12841 ctgcacttct tcgttggtca gcgagaagat gtcacgctgt tcctgcggta cgtcttcgat
    12901 tttaacctgc ttgccgtgct cctgggtcgg cgcgtaaacc atgcggattt ttttcgaccc
    12961 catggtgcgg cgcacgatag ccgggcgatt cgccgccagt gtcggtttat gcacgtaaaa
    13021 ctcatccggg ttaaccgccc cctgcacgac catctcacca aggccccatg cggaagtgat
    13081 aaacaccacc tggtcaaagc cggattcggt atcaatggag aacatcacgc cagaagatgc
    13141 gaggtcggag cgcaccatcc tctgaacacc ggcggagagc gccacgccac ggtgatcgta
    13201 accctggtgc acacgataag agatggcgcg atcgttaaac agagaagcaa atacatgttt
    13261 cactgccacg agaacggcgt caaacccctg aacgttgagg aaggtttcct gctgaccggc
    13321 aaaggaagcg tccggcatat cttctgcggt ggcggaggag cgcaccgcaa aagaggcgtt
    13381 ttcgtcatcg gcggaaagct gagcataggc ttcgcggatg gcgttttcca gctcagcctg
    13441 gaagggagtg tcgataatcc actggcggat ttgcgcgccc gctttcgcaa gctgagtaac
    13501 atcgtcaata tccgttttat ccagcagttc ataaatgcgc tggtttacgc cgctttggtc
    13561 cagaaactgg ttaaacgcgt cggcggttgt ggcgaaacca ttcggaacgg aaacgcccat
    13621 tccggaaagg ttagtaatca tttcacccag ggaggcattt ttgcccccaa ccctgtctac
    13681 atcattcatg ccgagttggt tgtaccaaag caccagcggt gacgagccat tgttggacat
    13741 cgaacaatcc ttttgtgata aatgaacggt ttgagaaaca catttctgcg catttatctt
    13801 tgcatattta accggatgaa aaaaacggtg aatcgttcaa gcaaatatat ttttttactt
    13861 tttaagactg atccc
//
LOCUS       DADMHC010000102        13811 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.102, whole genome shotgun sequence.
ACCESSION   DADMHC010000102 DADMHC010000000
VERSION     DADMHC010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13811)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13811)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13811
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.102"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..379)
                     /locus_tag="JNZ57_002477"
     CDS             complement(<1..379)
                     /locus_tag="JNZ57_002477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001683504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828672.1"
                     /translation="MNFKEKLEEHFKQFEASPVLFVGSGVSRRYLGVPCWQDLLKHFA
                     EAIEENHIKLKTKSNGDLPEYAQLLVSAYAEKWWDTEEGQLALSEKEQEKTFINEQSP
                     LKLSISKYIENAHKNIIDNDELKH"
     gene            complement(770..2038)
                     /locus_tag="JNZ57_002478"
     CDS             complement(770..2038)
                     /locus_tag="JNZ57_002478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012421665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HAY8828673.1"
                     /translation="MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRF
                     GGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHKRAVKEEQAKEIITFEKV
                     AREWLVTNQKWSEEHANRVKKSLEDNIFPAIGSHNIAELGTRDLLIPIKAVEKSGRLE
                     VASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLQKID
                     EYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPEREPIPGVKHSQRG
                     AKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPSKPMSENTVNSALRVMGYD
                     TKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEHLDERKLM
                     LQWWADFLDANREKGITPFDYAKINRGNGE"
     gene            complement(2239..2323)
                     /locus_tag="JNZ57_002479"
     tRNA            complement(2239..2323)
                     /locus_tag="JNZ57_002479"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2287..2289),aa:Leu,seq:caa)
     gene            2519..3538
                     /gene="ahr"
                     /locus_tag="JNZ57_002480"
     CDS             2519..3538
                     /gene="ahr"
                     /locus_tag="JNZ57_002480"
                     /EC_number="1.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent aldehyde reductase Ahr"
                     /protein_id="HAY8828674.1"
                     /translation="MSMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSD
                     LSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDAC
                     ISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKP
                     LLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVN
                     SRDPQALKALSGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLI
                     AGDRSISGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIKHVRDGKARYRVV
                     LKADF"
     gene            3668..5170
                     /locus_tag="JNZ57_002481"
     CDS             3668..5170
                     /locus_tag="JNZ57_002481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF853 domain-containing protein"
                     /protein_id="HAY8828675.1"
                     /translation="MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLA
                     ESLSEIGVPVFMADVKGDLTGIAQAGTASEKLLTRLKNIGVNDWQPHANPVVVWDIFG
                     EKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQY
                     IGDNAKSFQNQYGNISSASVGAIQRGLLSLEKQGAAHFFGEPMLDIKDWMRTDTNGKG
                     VINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAP
                     QVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAV
                     KAAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTE
                     DERNGLINHSPVYGKYEDDVDRESAYEMLQKGFQASTKQQNNPPAKGKAVAVDDGILG
                     GLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR"
     gene            complement(5331..6413)
                     /gene="lptG"
                     /locus_tag="JNZ57_002482"
     CDS             complement(5331..6413)
                     /gene="lptG"
                     /locus_tag="JNZ57_002482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313266.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HAY8828676.1"
                     /translation="MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ
                     GSYDALGAGMYTLLSVPKDVQTFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQV
                     ALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNF
                     VYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPK
                     QITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMW
                     SKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYG
                     IPPIIGALLPSASFFLISLWLLMRKS"
     gene            complement(6413..7513)
                     /gene="lptF"
                     /locus_tag="JNZ57_002483"
     CDS             complement(6413..7513)
                     /gene="lptF"
                     /locus_tag="JNZ57_002483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HAY8828677.1"
                     /translation="MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIP
                     ANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAA
                     MILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLF
                     IESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTAL
                     LRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTV
                     FVMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTV
                     NLIYLALAIVLNLWDTVPVRCLRASFSRKGAV"
     gene            7780..9291
                     /gene="pepA"
                     /locus_tag="JNZ57_002484"
     CDS             7780..9291
                     /gene="pepA"
                     /locus_tag="JNZ57_002484"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HAY8828678.1"
                     /translation="MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYIS
                     ALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLND
                     TGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFN
                     VPTRRELTSGERAILHGLAIAAAIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNV
                     ITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDS
                     GGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRP
                     GDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHI
                     TGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITA
                     GCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE"
     gene            9451..9894
                     /gene="holC"
                     /locus_tag="JNZ57_002485"
     CDS             9451..9894
                     /gene="holC"
                     /locus_tag="JNZ57_002485"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004098129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HAY8828679.1"
                     /translation="MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACE
                     DEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTS
                     FADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK"
     gene            9894..12749
                     /gene="valS"
                     /locus_tag="JNZ57_002486"
     CDS             9894..12749
                     /gene="valS"
                     /locus_tag="JNZ57_002486"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000416368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HAY8828680.1"
                     /translation="MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNV
                     TGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTR
                     HDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRL
                     YKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLV
                     VATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCV
                     KITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQK
                     LERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKP
                     AVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRN
                     EEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSG
                     FDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPL
                     DMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALAST
                     GRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFN
                     QTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLV
                     TVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTE
                     WLKQAIVAVRNIRAEMNIAPGKPLVLLLRGCSADAERRVNENRGFLQTLARLESITVL
                     PADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEG
                     FVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL"
     gene            complement(12805..>13811)
                     /locus_tag="JNZ57_002487"
     CDS             complement(12805..>13811)
                     /locus_tag="JNZ57_002487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF898 family protein"
                     /protein_id="HAY8828681.1"
                     /translation="FSYGITGGNVFFSCLVFVFFYFAILMTVSADMPLVGCVLTLSLL
                     VLLIFMAAKGLRYQALMTSLNGVRFSFNCSMKGFWWVTFFLPILMAIGMGTVFFISTK
                     MLHANSSSSVIISVVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDTA
                     YCIKYAILAFLALLPFLAVAGYIIFEQILNAYDSSVYANDDIENLQQFMEMQRKMIIA
                     QLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRSTLTYHGMLYRMCALVVISGI
                     TGGLAYPLLKIWMIDWQAKNTYLLGDLDDLPLINKEEQPDKGFLASISRGIMPSLPFL
                     "
BASE COUNT         3509 a         3528 c         3568 g         3206 t
ORIGIN      
        1 catgttttaa ctcatcatta tctataatat ttttatgtgc attctcaata tatttagata
       61 ttgacaactt caaaggagac tgttcgttaa tgaaagtttt ctcctgttct ttttcactta
      121 atgctaattg tccttcttca gtatcccacc atttctcagc atatgcagac accaataatt
      181 gtgcatattc gggtaagtca ccattagatt ttgtttttaa ttttatatga ttttcctcaa
      241 ttgcctcagc aaaatgcttc aaaaggtctt gccaacatgg cacaccaaga taacgacgag
      301 acacaccgga gccgacaaat aacactgggg atgcttcgaa ctgcttaaaa tgctcttcga
      361 gtttttcctt aaaattcata cggatactct ctttaaaaga aatcaagccc ctttatactg
      421 attacattaa gatattgcgg cttacaccac cagtaaattg gtcaatttta cgtaagaaat
      481 ttaattattt agattcaatt aattattaga ttaactaatt gactatcact cctgatgtag
      541 ccgaattgct gtacctttgt tacgatgtag ggctcaatca agggtccact ccccttttat
      601 aagtaatcat gactttaaat ttaggcttag gtggagcatt actgccgatt aggttcaata
      661 aaaaggctta ccttagtgaa aactcggcta tttggcactg ctgaccaatt cctcgtttga
      721 ataagtcagc agctttcaat ttagaggcga atgtgcgctt ttagataact cactcgccat
      781 taccccgatt gatcttcgca tagtcaaacg gcgtaatccc cttctcccgg ttcgcatcca
      841 gaaaatcagc ccaccactgc aacatcagct tgcgctcatc cagatgttcc gctttatgga
      901 tatacgccgc cctcaccgaa ttgcgttcca tatggctcat ctgcctttcc accgcatcct
      961 tcgaccataa ccctgactca atcaatgagc tacaggccat agtgcggaag ccgtggccgc
     1021 aaacctcaac cttggtgtca tagcccatca cccgcaatgc actgttcacc gtgttttcac
     1081 tcatgggctt actcggatcg tgatcgccaa taaaaatcag ctcatgttcg ccacagaact
     1141 gttttatctg cttcaggatc gctagcgcct gctttgaaag cggcaccaga tgaggtgtac
     1201 gcatctttgc tcctcgctga gaatgtttca caccgggaat aggttctcgc tcaggcggga
     1261 tggtccacat tgacgtttca aaatcgattt ctgaccagcg agcaaaacgc agctcactgg
     1321 atcgaataaa aataagcagg gtaagttcgg ttgcccagcg ggttagtggc ctgccggtgt
     1381 attcatcgat tttctggagt aattccggga tacgctttaa ctccagcgcc ggacgatgct
     1441 gtcgattaca ggaagctacc gcccccgcca tctcttgcgc cggattgtaa tcaattaacc
     1501 cgctttgcac tgcataacgc atgatggccg tggtgcgctg ttgaaggcgg gaagccactt
     1561 caagacgtcc ggatttctcc acggctttaa taggaattaa cagatcgcgg gtgcccagtt
     1621 cagcaatatt gtgggaacca attgccggga agatattgtc ctccaggctc ttttttacac
     1681 gattagcatg ctcttccgac catttttggt tggttacgag ccactctctg gcaaccttct
     1741 cgaaagtaat aatctctttc gcctgctctt ctttcacagc acgcttatgc tcacgaggat
     1801 cgataccagc agctaccagc tttctggcct cttccctttt cttccgcgca tccgccagcg
     1861 aaacatccgg gtaaacgccg aacgccatca aatgttgttt accgccaaaa cggaaacgaa
     1921 atcgccaata ctttgaaccg ccaggtttta caagtaagga catgccgtcg ccgtcaacaa
     1981 gtgaatactc tttctcctca ggtttcgcag agcgaacttt agtatccgtt agggccataa
     2041 tggtcttcct tccattggta tctcgtgagt atacaagcaa tatcgaatcg gcaaatatac
     2101 tcattagtat actcacaagc ctgttgatgt gggttgagtc aggttgactt cagttgaggg
     2161 gaaaagctgg aaaagccttg tgtagcgcgg atttcaggca taaaaaaaga cctcagttga
     2221 ggtctattta catacttttg gtgccgaagg ccggactcga accggcacgt atttctacgg
     2281 ttgattttga atcaactgcg tctaccgatt tcgccacttc ggcactgaag aggtatgcgg
     2341 aaaacgttgt ggattatacc tgtcgcacgc caccatgcaa gcgccagctt gctcgcacct
     2401 cgctaagtgc tgaaattttc agcattgcac acagcgatgt gtaacctttg tcacactcca
     2461 ggcaccccgc cctgccatgc tctacacttc ccaaacaaca ccagagaagg accaaaaaat
     2521 gtcgatgata aaaagctatg ccgcaaaaga agcgggcggc gaactggaag tttatgagta
     2581 cgatcccggt gagctgaggc cacaagatgt tgaagtgcag gtggattatt gcgggatctg
     2641 ccattccgat ctatcgatga tcgacaatga atggggattt tcacaatatc cgctggttgc
     2701 cgggcatgag gtgattgggc gcgtggtggc actcgggagc gccgcgcagg ataaaggttt
     2761 gcaggtcggt cagcgtgtcg ggattggctg gacggcgcgt agctgtggtc actgcgacgc
     2821 ctgtattagc ggtaatcaga tcaactgcga gcaaggtgcg gtgccgacga ttatgaatcg
     2881 cggtggcttt gccgagaagt tgcgtgcgga ctggcaatgg gtgattccac tgccagaaaa
     2941 tattgatatc gagtccgccg ggccgctgtt gtgcggcggt atcacggtct ttaaaccact
     3001 gttgatgcac catatcactg ctaccagccg cgttggggta attggtattg gcgggctggg
     3061 gcatatcgct ataaaacttc tgcacgcaat gggatgcgag gtgacggcct ttagttctaa
     3121 tccggcgaaa gagcaggaag tactggcgat gggtgccgat aaagtggtga atagccgcga
     3181 tccgcaggca ctgaaagccc tgtcggggca gtttgatctc attatcaata ctgtgaacgt
     3241 cagcctcgac tggcagcctt attttgaggc gctgacctat ggcggtaatt tccatacggt
     3301 cggtgcggtt ctcacgccgc tgtctgttcc ggcctttacg ttaattgcgg gcgaccgcag
     3361 catctctggt tctgctaccg gcacgcctta tgagctgcga aagctgatgc gctttgccgc
     3421 ccgtagcaag gttgcgccga ccaccgaact gttcccgatg tcgaaaatta acgatgccat
     3481 caagcatgtg cgcgacggta aggcgcgtta ccgcgtggtt ctgaaagccg acttctgatc
     3541 actttgccgg gtgcctgtcg cccggcactt aaatctcttt ggaaggcgtc tcgcaatctg
     3601 ctgaatttag cggtgaagag tgcgcagccg ttgcctatac tccaggcagg aaactggagg
     3661 aaatctcatg agcgaacccc tattaattgc ccgcacgccg gacacagaac tttttttact
     3721 gccgggaatg gctaaccgtc acgggctgat tactggcgca acggggacgg gtaaaaccgt
     3781 tacgctgcaa aaactggcag agtcattgtc ggaaatcggc gtgccggtgt ttatggctga
     3841 tgtgaaaggc gatctgaccg gtatcgcgca ggcaggaacg gcgtcggaaa aactgctcac
     3901 aaggcttaaa aatatcggcg tcaatgactg gcaaccgcat gctaatccgg tggtggtgtg
     3961 ggatatcttt ggcgagaaag gccatccggt gcgggcgacg gtttcagacc tggggccgct
     4021 gttgctggcg cggctgttga atctcaacga tgtgcaatct ggcgtgctga atatcatctt
     4081 ccgtattgct gacgatcagg gattgttgct gctcgacttt aaagatctgc gggcgattac
     4141 ccagtacatc ggcgataacg ccaaatcttt ccagaatcag tacggtaata tcagtagcgc
     4201 atcggttggt gccatccagc gcggtttact gtcgctggaa aagcaaggtg cggcgcattt
     4261 ctttggcgag ccgatgctgg atatcaaaga ctggatgcgc accgatacca acggtaaagg
     4321 cgttatcaat atcctcagcg ccgagaagct ttatcagatg ccgaaactgt acgccgccag
     4381 cctgctgtgg atgctttcag agttgtatga acaattgccg gaagcgggcg atctggagaa
     4441 accaaaactg gtgtttttct tcgacgaggc acatctgctg tttaacgatg caccgcaggt
     4501 actgctggat aagattgagc aggtaataag gcttattcgc tcaaaaggcg tgggcgtctg
     4561 gttcgtttcg caaaacccgt ctgatattcc ggataatgtg ctcgggcagc tcggtaatcg
     4621 cgttcaacac gctttgcggg cttttacgcc caaagatcag aaagcggtaa aagctgcggc
     4681 gcaaaccatg cgggccaatc cggcgtttga taccgaaaag gcaatccagg aactggggac
     4741 cggcgaggcg ttaatctcgt ttctcgatgc aaaaggaagt ccttctgtgg tggaacgggc
     4801 gatggtgatt gcgccttgtt cgcggatggg accggtgacg gaagatgagc gcaatggctt
     4861 gattaaccac tccccggtgt atggcaagta cgaggatgac gtggaccggg aatccgccta
     4921 tgagatgttg caaaaaggct ttcaggccag taccaagcag caaaataatc ctcccgcgaa
     4981 agggaaagcg gtggcggtgg atgacggtat tcttggtgga ttgaaggata ttttgtttgg
     5041 cactaccgga ccacgcggcg ggaagaaaga tggtgtggtg caaacaatgg cgaaaagcgc
     5101 cgcccgccag gtgacgaatc agattgtacg tgggatgttg gggagtttgc tggggggaag
     5161 aagaaggtaa gtcaggcgcg atttgtcttt gcctgatgcg acgctggcgc gtcttatcat
     5221 gcctacacca ctgcaatata ttggattttc atgatttttc aggcatgaac gaagcacact
     5281 ttgctaacaa taataaaggg agctttcgct ccctttattc gttcattcgg ttacgatttt
     5341 ctcattaaca gccacaggct gattaagaag aagctggcgc ttggcaacag tgcgccgatg
     5401 atcggcggga tgccataaac caacgtcagc gggccgaaga tctggtccag tacgtagaag
     5461 acaaaaccga agctgatacc ggtgaccaca cgcacgccca tcggtacgct acgcagtggg
     5521 ccaaagatga acgacagcgc catcagcatc atcaccgcca cggatagcgg ctggaagatt
     5581 ttgctccaca tattgagctg ataacgtccg gcatcctgac cgctcgactt cagatacttc
     5641 acgtagttgt gcaaaccgct gattgagagt gcatccgggt ccagcgccac cacgcccagt
     5701 ttgtccggcg tgaggttggt tttccaggtg ccgctcaccg tctgcgaacc ggtgatctgt
     5761 ttcggattgg tcagatcaga ttcatcaacc tgcgacagac gccagacttt atgttccggg
     5821 tcaaacttcg cagtagcggc atagcgtacg gattgcagac gacgattctc gttaaaggca
     5881 taaatactga tgccacctaa ctcttcgtca cctttaaccc gctcaatgta aacgaagttg
     5941 ttgccatctt tcgcccataa gccttgctgg gtagagagca acgagccgcc gtacatcgcc
     6001 tgcgcacggt agttacgcgc catctgctcg ccctgcggcg cgacccattc accaatcgcc
     6061 atcgtcagca agaccagcgg aatggcggtt ttcatcaccg acagcgcaac ctgcatacgg
     6121 gtgaaaccag aagcctgcat caccaccagt tcgctgcgct gcgccagcat cccaagacca
     6181 agcaacgccc caagcagagc cgccatcggg aagaatgttt gcacatcttt cggcacgctc
     6241 agcaaggtat acattcctgc gcctaacgcg tcgtaactcc cctgcccggc ttttttcagc
     6301 tgatcgacaa atttgataat gcccgacagc gacaccagca tgaacagcgt catcatgatg
     6361 gtggtgaaaa tagttttacc gatatagcgg tcaagtacgc caaaaggttg catcacaccg
     6421 ctcctttacg cgaaaaactg gcgcgcaggc agcggaccgg cacggtgtcc caaaggttga
     6481 gaacaatcgc caaagccaga taaatcaggt taacggtcca catccacagc gtcgggtcca
     6541 gcttaccttt accgccgttc gatttcaggg aggtctggat caggaagaaa agtagataca
     6601 gcagcatggc tggcagcatc gatagtacgc gtccctgacg cgggttaacc acgctcagcg
     6661 gtacgaccat aagtgccatc acaaacacgg tgaataccaa cgtgatacgc cagttcagtt
     6721 ctgcgcgggc acgatcggtg tcagtgttcc acaatgtacg catgtccatc tggtcggtat
     6781 cgttcgggtc gagcgctacc gcctggtgac caatgatcgc ctgataatcc tggaagtccg
     6841 taatgcggaa atcacgtaac agtgcagtgc cttcgaagcg cgttccctgg ttgagagtga
     6901 cgacctggga gccgtcgcgc agctgggtta aatgtccgga atcggccacc accacagaag
     6961 gacgtgcatt accttttggt cgaatttgcg cgaggaacac atctttgaaa tcgctgccgt
     7021 caacgctttc gatgaacagc accgagctgc cattagtcgc ttgctggaat tgcccttgcg
     7081 ccagcgccgc catgccaggg ttcgctttcg cttctgctaa cacttcatcc tgatgacgcg
     7141 atgaccacgg tcccgcccac atcacgttaa ccgccgcgac gattgcagtg aataccgcaa
     7201 ggatcattgc cgctttcacc agaaccgctt tgctcaggcc gcaggcatgc attaccgtaa
     7261 tttcactttc ggtatacagt ttgcccagcg tcatcagcag cccgaggaac aggcttaatg
     7321 gcaggataag ctgcgccatt tccggcacgc ccaacccgag aagggagagc accagattcg
     7381 ccggaatatc gccgtcaacc gctgcgccga ggatcctcac taacttttga cagaagaaga
     7441 tcaaaagcaa gatgaagagt atcgccagct ggcttttgag cgtctcccgc accagatatc
     7501 ttatgattat cactttaaat acgcccgtaa aaactcgtct tttgcaggat tttagcttgt
     7561 ttcatggctt aaacgtcatt tattctcttg agtcgtcgaa atcgtcgcta agataattat
     7621 actcaacgga ttcacctctc agattttgtt ctgacgtgcc aatgccgtaa taacgttaag
     7681 attaacacga agtcatcgca acagcggaca tgagttacga aagcttgcaa ttctatctgt
     7741 agccaccgcc gttgtcttta agattcagga gcgtagtgca tggagtttag tgtaaaaagc
     7801 ggtagcccgg agaaacagcg gagtgcctgc atcgtcgtgg gcgtcttcga accacgtcgc
     7861 ctttctccga ttgcagaaca gctcgataaa atcagcgatg ggtacatcag cgccctgcta
     7921 cgtcggggcg aactggaagg aaaaccgggg cagacattgt tgctgcacca tgttccgaat
     7981 gtactttccg agcgaattct ccttattggt tgcggcaaag aacgtgagct ggatgagcgt
     8041 cagtacaagc aggttattca gaaaaccatt aataccctga atgatactgg ctcaatggaa
     8101 gcggtctgct ttctgactga actgcacgtt aaaggccgta acaactactg gaaagtgcgt
     8161 caggctgtcg agacggcaaa agagacgctc tacagtttcg atcagctgaa aacgaacaag
     8221 agcgaaccgc gtcgtccgct gcgtaaaatg gtgttcaacg tgccgacccg ccgtgaactg
     8281 accagcggtg agcgcgcgat cctgcacggt ctggcgattg ccgccgcgat taaagcagca
     8341 aaagatctcg gcaatatgcc gccgaatatc tgtaacgccg cttacctcgc ttcacaagcg
     8401 cgccagctgg ctgacagcta cagcaagaat gtcatcaccc gcgttatcgg cgaacagcag
     8461 atgaaagagc tggggatgca ttcctatctg gcggtcggtc agggttcgca aaacgaatcg
     8521 ctgatgtcgg tgattgagta caaaggcaac gcgtcggaag atgcacgccc aatcgtgctg
     8581 gtgggtaaag gtttaacctt cgactccggc ggtatctcga tcaagccttc agaaggcatg
     8641 gatgagatga agtacgatat gtgcggtgcg gcagcggttt acggcgtgat gcggatggtc
     8701 gcggagctac aactgccgat taacgttatc ggcgtgttgg caggctgcga aaacatgcct
     8761 ggcggacgag cctatcgtcc gggcgatgtg ttaaccacca tgtccggtca aactgttgaa
     8821 gtgctgaata ccgacgctga aggccgcctg gtactgtgcg acgtgttaac ttacgttgag
     8881 cgttttgagc cggaagcggt gattgacgtg gcgacgctga ccggtgcctg cgtgatcgcg
     8941 ctgggtcatc acattaccgg tctgatggcg aaccataatc cgctggccca tgaactgatt
     9001 gccgcgtctg aacaatccgg tgaccgcgca tggcgcttac cgctgggtga cgagtatcag
     9061 gaacagctgg agtccaattt tgccgatatg gcgaacattg gcggtcgtcc tggtggggcg
     9121 attaccgcag gttgcttcct gtcgcgcttt acccgtaagt acaactgggc gcacctggat
     9181 atcgccggaa ccgcctggcg ttctggtaaa gcaaaaggcg ccaccggtcg tccggtggcg
     9241 ttgctggcac agttcctgtt aaaccgcgct gggtttaacg gcgaagagta attgcgtcag
     9301 gcaaggctgt tattgccgga tgcggcgtga acgccttatc cgacctacac agcactgaac
     9361 tcgtaggcct gataagacac aacagcgtcg catcaggcgc tgcggtgtat acctgatgcg
     9421 tatttaaatc caccacaaga agccccatat atgaaaaacg cgacgttcta ccttctggac
     9481 aatgacacca ccgtcgatgg cttaagcgcc gttgagcaac tggtgtgtga aattgccgca
     9541 gaacgttggc gcagcggtaa gcgcgtgctc atcgcctgtg aagatgaaaa gcaggcttac
     9601 cggctggatg aagccctgtg ggcgcgtccg gcagaaagct ttgttccgca taatttagcg
     9661 ggagaaggac cgcgcggcgg tgcgccggtg gagatcgcct ggccgcaaaa acgcagcagc
     9721 agcccgcgcg atatattgat tagtctgcga acaagctttg cagattttgc caccgctttc
     9781 acagaagtgg tagacttcgt tccttatgaa gattctctga aacaactggc gcgcgaacgc
     9841 tataaagcct accgcgtggc tggtttcaac ctgaatacgg caacctggaa ataatggaaa
     9901 agacatataa cccacaagat atcgaacagc cgctttacga gcactgggaa aagcagggct
     9961 actttaagcc taatggcgat gaaagccagg aaagtttctg catcatgatc ccgccgccga
    10021 acgtcaccgg cagtttgcat atgggtcacg ccttccagca aaccatcatg gataccatga
    10081 tccgctatca gcgcatgcag ggcaaaaaca ccctgtggca ggtcggtact gaccacgccg
    10141 ggatcgctac ccagatggtc gttgagcgca agattgccgc agaagaaggt aaaacccgtc
    10201 acgactacgg ccgcgaagct ttcatcgaca aaatttggga atggaaagcg gaatccggcg
    10261 gcacgattac ccgtcagatg cgccgtctcg gcaactccgt cgactgggag cgtgaacgct
    10321 tcacgatgga cgaaggcctg tccaatgcgg tgaaagaagt tttcgttcgt ctgtataaag
    10381 aagacctgat ttaccgtggc aaacgcctgg taaactggga tccgaaactg cgcaccgcta
    10441 tctctgacct ggaagtggaa aaccgcgaat cgaaaggttc gatgtggcac atccgctatc
    10501 cgctggctga cggcgcgaaa accgcagacg gtaaagatta tctggtggtt gcgactaccc
    10561 gtccggaaac cctgttgggc gataccggcg tggccgttaa cccggaagat ccgcgttaca
    10621 aagacctgat tggcaaatat gtcattctac cgctggttaa ccgtcgtatt ccgatcgttg
    10681 gcgacgaaca cgccgacatg gaaaaaggca ccggctgcgt gaaaatcact ccggcgcacg
    10741 actttaacga ctatgaagtg ggtaaacgtc acgcgctgcc gatgatcaac atcctgacct
    10801 ttgacggcga tatccgtgaa agcgcccagg tgttcgatac caaaggtaac gaatctgacg
    10861 tttattccag cgaaatcccg gcagagttcc agaaactgga gcgttttgct gcacgtaaag
    10921 cagtcgttgc tgcggttgac gcgctcggcc tgctggaaga aattaaaccg cacgacctga
    10981 ccgtgcctta cggcgaccgt ggcggcgtag ttatcgaacc gatgctcacc gaccagtggt
    11041 acgtgcgtgc cgatgtactg gcgaaaccgg cggttgaggc ggttgagaac ggcgacattc
    11101 agttcgtacc gaagcagtac gaaaacatgt acttctcctg gatgcgcgat attcaggact
    11161 ggtgtatctc tcgtcagctg tggtggggtc accgtatccc tgcatggtac gacgaagcag
    11221 gtaacgttta tgttggccgc aacgaagaag aagtgcgcaa ggaaaataac ctcggtgccg
    11281 acgttgccct gcgtcaggac gaagacgttc tcgacacctg gttctcttct gcgctgtgga
    11341 ccttctctac cctaggctgg ccggaaaaca ccgacgcact gcgccagttc cacccaacca
    11401 gcgtgatggt atctggtttc gacatcattt tcttctggat tgcccgcatg atcatgatga
    11461 ccatgcactt catcaaagat gaaaatggca aaccgcaggt gccgttccat accgtttaca
    11521 tgaccggcct gattcgtgac gacgaaggcc agaagatgtc caaatccaag ggtaacgtta
    11581 ttgacccgct ggatatggtt gacggtattt cgctgccgga actgctggag aaacgtaccg
    11641 gcaatatgat gcagccgcag ctggcggaca aaatccgtaa gcgcaccgag aaacagttcc
    11701 cgaacggcat tgagccgcac ggcaccgatg ccctgcgctt caccctggcg gcgctggctt
    11761 ctaccggtcg tgacatcaac tgggatatga aacgcctgga aggctaccgt aacttctgta
    11821 acaagctgtg gaacgccagc cgctttgtgc tgatgaacac ggaaggtcag gattgcggct
    11881 tcaacggtgg tgaaatgacg ctgtcgctgg cggaccgctg gattctggca gagttcaacc
    11941 agaccatcaa agcgtaccgc gaagcgctgg acagcttccg cttcgatatc gctgcaggca
    12001 ttctgtatga gttcacctgg aaccagttct gcgactggta tctggagctg actaagccgg
    12061 taatgaacgg tggaaccgaa gccgaactgc gcggtactcg ccatacgctg gtgactgtac
    12121 tggaaggtct gctgcgcctc gcgcatccga tcattccgtt catcaccgaa accatctggc
    12181 agcgtgtgaa agtactttgc ggtatcactg ccgacaccat catgctgcag ccgttcccgc
    12241 agtacgatgc atctcaggtt gatgaagccg cactggctga caccgagtgg ctgaaacagg
    12301 cgatcgttgc ggtacgtaac atccgtgcag aaatgaacat cgcgccgggc aaaccgctgg
    12361 tgctgctgct gcgtggttgc agcgcggatg cagaacgtcg cgtaaatgaa aaccgtggct
    12421 tcctgcaaac cctggcgcgt ctggaaagca tcaccgtgct gcctgccgat gacaaaggtc
    12481 cggtttccgt tacgaagatc atcgacggcg cagagctgct gatcccgatg gctggcctca
    12541 tcaacaaaga agatgagctg gcgcgtctgg cgaaagaagt ggcgaagatc gaaggcgaaa
    12601 tcagccgtat cgagaacaag ctggcgaatg aaggctttgt cgcccgcgca ccggaagcgg
    12661 tcatcgcgaa agagcgtgag aagctggaag gctatgcaga agcgaaagcg aagctgattg
    12721 aacagcaggc tgttatcgcc gcgctgtaat caaaacacag tgatgaaaac gaaggccgga
    12781 gcatgctccg gcctttttta tctcttacag aaatggtaaa gaaggcataa ttccccgtga
    12841 aatactggct aagaagcctt tatctggttg ttcttcttta ttgattaaag gaaggtcatc
    12901 caaatcgccc agcaaatacg tattttttgc ctgccagtca atcatccata ttttcagcag
    12961 tggataagcc agaccgcccg taatcccgga tatcactacc aacgcacaca tgcgataaag
    13021 cataccgtgg tacgttaaag ttgagcgaaa acgaatacgc ccatcattca gtgacaggtt
    13081 gctcataaaa tgatttcgca acgacaccgt taaataactg gtgctaacag caatcccaaa
    13141 ataatagatt aactgcgcga ttatcatttt acgttgcatt tccataaatt gctgtaaatt
    13201 ctcaatatca tcatttgcat acacagaact atcatacgca tttaatattt gttcgaagat
    13261 aatataacca gcaacagcga gaaaaggtaa taaagctaaa aatgcgagga tggcatattt
    13321 tatacaatac gcagtatcta atttcacctt gaaacgatgt ataccgaaac tggtattgct
    13381 ccagagaaaa ctcattacca ggctatataa agtaccatta aaaataccaa tggaaacaat
    13441 accaactatt gccatcagaa ccacagatat aataacacta cttgaactat tggcatgtag
    13501 catctttgtc gagataaaga aaacagtccc catcccaatg gccattaaaa tcggcaagaa
    13561 aaaggttacc caccagaacc ctttcataga gcaattaaaa ctaaatctta cgccgttgag
    13621 actagtcatc aaggcctgat aacgcagtcc ttttgctgcc ataaatataa gcaaaaccaa
    13681 cagtgacaaa gtcaaaacac agccaacaag cggcatatct gctgacactg tcattaagat
    13741 tgcgaaatag aaaaaaacaa aaacaagaca actaaaaaaa acattcccac cagtaattcc
    13801 ataagaaaat c
//
LOCUS       DADMHC010000103        13603 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.103, whole genome shotgun sequence.
ACCESSION   DADMHC010000103 DADMHC010000000
VERSION     DADMHC010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13603)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13603)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13603
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.103"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(1..1860)
                     /locus_tag="JNZ57_002488"
                     /pseudo
     CDS             complement(1..1860)
                     /locus_tag="JNZ57_002488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311868.2"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase"
     gene            2258..2965
                     /locus_tag="JNZ57_002489"
     CDS             2258..2965
                     /locus_tag="JNZ57_002489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF554 domain-containing protein"
                     /protein_id="HAY8828682.1"
                     /translation="MVIGPFINASAVLLGGVLGALLSQRLPERIRISMTSIFGLASLG
                     IGILLVVKCANLPAMVLATLLGALIGEICLLEKGVNTAVAKAQNLFRHSRKKPTHESF
                     IQNYVAIIVLFCASGTGIFGAMNEGMTGDPSILIAKSFLDFFTAMIFACSLGIAVSVI
                     SIPLLIIQLTLAWAAALILPLTTPSMMADFSAVGGLLLLATGLRICGIKMFPVVNMLP
                     ALLLAMPLSAAWTAWFA"
     gene            3071..3146
                     /locus_tag="JNZ57_002490"
     tRNA            3071..3146
                     /locus_tag="JNZ57_002490"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3104..3106,aa:Phe,seq:gaa)
     gene            complement(3295..3831)
                     /locus_tag="JNZ57_002491"
     CDS             complement(3295..3831)
                     /locus_tag="JNZ57_002491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HAY8828683.1"
                     /translation="MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAV
                     VFLFSVGYYVLIWQPLSERIVQQETMLQQLVAMNTRLRSAAPDIIAARKSATTTPAQV
                     SRVISDSASAHSVVIKRIAERGENIQVWIDPVVFNDLLNWLNALDEKYALRVTQIDAS
                     AAEKTGMVNVQRLEFGRG"
     gene            complement(3833..5011)
                     /gene="gspL"
                     /locus_tag="JNZ57_002492"
     CDS             complement(3833..5011)
                     /gene="gspL"
                     /locus_tag="JNZ57_002492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000097227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspL"
                     /protein_id="HAY8828684.1"
                     /translation="MSSILEIFFPLCAADPIHWQRRTPDVEHGIWSDVANEQLQQWLQ
                     TDAIRLYIPGEWISVWQVELPDVARKQIPTILPALLEEELNQDIDELHFAPLNIDQQL
                     ATVAVIHQQHMRNIAQWLQENGITRATVAPDWMSIPCGVMAGDAQRVICRIDECRGWS
                     AGRALAPVMFRAQLNEQDLPLSLTVVGIAPEKLSAWAGADAERLTVTALPAVTTYGEP
                     EGNLLTGPWQPRVSYRKQWARWRVMILPILLILVALAVERGVTLWSVSEQVAQSRTQA
                     EEQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAIASTLKSASLSDIEM
                     RGFTFDQKRQILHLQLRAANFASFDKLRSALATDYVVQQDALQKEGDAVSGGVTLRRK
                     "
     gene            complement(5008..5985)
                     /gene="gspK"
                     /locus_tag="JNZ57_002493"
     CDS             complement(5008..5985)
                     /gene="gspK"
                     /locus_tag="JNZ57_002493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001554494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspK"
                     /protein_id="HAY8828685.1"
                     /translation="MITSPPKRGMALVVVLVLLAVMMLVTITLSGRMQQQLGRTRSQQ
                     EYQQALWYSASAESLALSALSLSLKNEKRVHLAQPWASGPRFFPLPQGQIAVTLRDAQ
                     ACFNLNALAQPTTASRPLAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVQTRL
                     GREDSEYLARSVPFYAANQPLSDISEMRVVQGMDAGLYQKLKPLVCALPMIRQQININ
                     TLDVTQSVILEALFDPWLSPVQARALLQQRPAKGWEDVDQFLAQPLLADVDERTKKQL
                     KTVLSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQTGESE"
     gene            complement(5988..6587)
                     /gene="gspJ"
                     /locus_tag="JNZ57_002494"
     CDS             complement(5988..6587)
                     /gene="gspJ"
                     /locus_tag="JNZ57_002494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001255030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspJ"
                     /protein_id="HAY8828686.1"
                     /translation="MRRTRAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAVADH
                     DQKLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPALLAGAGVLASESEGMRFVRGGV
                     VNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFYDG
                     TRWQESWSSVQAIPVAVRMTLHSPQWGEIERIWLLRGPQ"
     gene            complement(6584..6955)
                     /gene="gspI"
                     /locus_tag="JNZ57_002495"
     CDS             complement(6584..6955)
                     /gene="gspI"
                     /locus_tag="JNZ57_002495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001709020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspI"
                     /protein_id="HAY8828687.1"
                     /translation="MKRGFTLLEVMLVLAIFALAATAVLQIASGALSNQHVLEEKTVA
                     GWVAENQTALLYLMTREQRAVRHQGESDMAGSRWYWRTIPLNTGNALLQAVDIEVSRH
                     EDFSSVIQSRRAWFSAVGGQQ"
     gene            complement(6952..7515)
                     /gene="gspH"
                     /locus_tag="JNZ57_002496"
     CDS             complement(6952..7515)
                     /gene="gspH"
                     /locus_tag="JNZ57_002496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001394829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspH"
                     /protein_id="HAY8828688.1"
                     /translation="MPERGFTLLEIMLVIFLIGLASAGVVQTFATDSEPPAKKAAQDF
                     LTRFAQFNDRAVIEGQTLGVLIDPPGYQFMQRRQGQWLPVSATRLSAQVTVPKQVQML
                     LQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYS
                     AAQNACWAVKLAHDGALSLNQCDERMP"
     gene            complement(7519..7974)
                     /gene="gspG"
                     /locus_tag="JNZ57_002497"
     CDS             complement(7519..7974)
                     /gene="gspG"
                     /locus_tag="JNZ57_002497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003912123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system major pseudopilin GspG"
                     /protein_id="HAY8828689.1"
                     /translation="MNSLSRTHKPRAGFTLLEVMVVIVILGVLASLVVPNLLGNKEKA
                     DRQKAISDIVALENALDMYRLDNGRYPTTEQGLEALIQQPANMADSRNYRTGGYIKRL
                     PKDPWGNDYQYLSPGEKGLFDVYTLGADGQENGEGAGADIGNWNLQEFQ"
     gene            complement(7991..9214)
                     /gene="gspF"
                     /locus_tag="JNZ57_002498"
     CDS             complement(7991..9214)
                     /gene="gspF"
                     /locus_tag="JNZ57_002498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001173399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system inner membrane protein
                     GspF"
                     /protein_id="HAY8828690.1"
                     /translation="MALFYYQALERNGRKTKGMIEADSARHARQLLRGKELIPVHIEA
                     RMNASAGGMLQRRRHAHRRVAAADLALFTRQLAMLVQAAMPLETCLQAVSEQSEKLHV
                     KSLGMALRSRIQEGYTLSDSLREHPRVFDSLFCSMVAAGEKSGHLDVVLNRLADYTEQ
                     RQRLKSRLLQAMLYPLVMLVVATGVVTILLTAVVPKIIEQFDHLGHALPSSTRALIAM
                     SDALQASGVYWLAGLLALLVLGQWLLKNPTMRLRWDKTLLRLPVTGRVARGLNTARFS
                     RTLSILTASSVPLLEGIQTAAAVSANRYVEQQLLLAADRVREGSSLRAALVELRLFPP
                     MMLYMIASGEQSGELETMLEQAAVNQEREFDTQVGLALGLFEPALVVMMAGVVLFIVI
                     AILEPMLQLNNMVGM"
     gene            complement(9214..10706)
                     /gene="gspE"
                     /locus_tag="JNZ57_002499"
                     /pseudo
     CDS             complement(9214..10706)
                     /gene="gspE"
                     /locus_tag="JNZ57_002499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001525635.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system ATPase GspE"
     gene            complement(10706..12701)
                     /gene="gspD"
                     /locus_tag="JNZ57_002500"
                     /pseudo
     CDS             complement(10706..12701)
                     /gene="gspD"
                     /locus_tag="JNZ57_002500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020234996.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system secretin GspD"
     gene            complement(12731..13573)
                     /gene="gspC"
                     /locus_tag="JNZ57_002501"
     CDS             complement(12731..13573)
                     /gene="gspC"
                     /locus_tag="JNZ57_002501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001327198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspC"
                     /protein_id="HAY8828691.1"
                     /translation="MVRGMFWLMLLIISAKVAHSLWRYFSFSAEYTAVSPSANKPPRA
                     DAKTFDKNDVQLISQQNWFGKYQPVATPVKQPEPVPVAETRLNVVLRGIAFGARPGAV
                     IEEGGKQQVYLQGETLGSHNAVIEEINRDHVMLRYQGKIERLSLAEEERSTVAATNKK
                     AVSDEAKQAVAEPAVSAPVEIPTAVRQALAKDPQKIFNYIQLTPVRKEGIVGYAVKPG
                     ADRSLFDASGFKEGDIAIALNQQDFTDPRAMIALMRQLPSMDSIQLTVLRKGARHDIS
                     IALR"
BASE COUNT         3052 a         3920 c         3506 g         3125 t
ORIGIN      
        1 tgcgcatcct gggggttcat caccactgac gggaaactct gctggcggaa catcgctttt
       61 tgtaggtctt tgacgtcgaa actgacatac agatcgtgca tctcctgaca caactggcgc
      121 aaagtgtagt cgcgatagcg caccggatat ttgttataaa cgctcggcaa cacctcagcc
      181 agcggcgagt catcctcaat atgctgttca aactgcgcca acatctctac cagttgtgcc
      241 agcttctcgt ggctttccgc cggagttaat aagaacagaa tggagttgag atcgcacttc
      301 tccggcacaa tgccgttctc acgcagatag tgcgccagaa tcgtcgccgg aacgccaaag
      361 tcgctatatt cgccggtttc ggcattgata cctggtgtag tgagtaacag cttgcacgga
      421 tcaacaaaat actgatccgc ggcatatcct tcaaagccgt gccacttcgc ccccggctca
      481 aaactgaaaa aacggcggtc gctggctaac actgatgtcg gataatcctg ccacaatttg
      541 ccatcaacaa cgggcgggat aaacgggcgg aacagcttac agcgcgcaag aatagccttg
      601 cgcgactcaa tacccaactc aacgcactca gcccacagcc gacgcccact ctccccttca
      661 tgaattttgg cgttaacatc cagtgcagca aacagcggat agaaagggct ggtagaagca
      721 tggagcataa aggcgttatt caaccgctta tgcgggcaaa aacgcgcctg tccgcggata
      781 tggttatctt ttttatggat ctgcgacgtc tgtgagaatc ccgcctgctg tttgtgcacc
      841 gactgagtca caaagatccc cggatcgttt tcgttaagtt ctaatagcag cggcgagcta
      901 tccgccatca tcgggataaa ctgttcgtaa ccgacccacg cggaatcaaa cagaatgtaa
      961 tcacacagat gcccaacggt atcgatcacc tgacgggcgt tatagacagt tccgtcatag
     1021 gttcccagct gaataatcgc caggcgaaac gggcgcggca gctcggcttt ttctggcgca
     1081 acgtcgcgaa tttgctggcg cagatactct tcattaaaac agtgcgcatc aataccgcca
     1141 atgaaaccaa acgggttgcg tgaagcttcc agatagacct gcgtcgcccc cgcctgaatc
     1201 agcgcgccgt gatgattcga cttatggttg ttacggtcga agagcaccag atcgccacgc
     1261 gttaacagcg cattcgtcac cactttattc gctgccgatg tgccgttcag cacaaaatag
     1321 gttttatcgg catgaaagac tttggctgcg aatttctgcg catctttcgc caataagcag
     1381 atcgcccaat tttacgtcag cgttacacat atcggcgcga aagacgttct caccaaagaa
     1441 atcgtaaaaa tggcgtccgg caggatgctt tttaaaaaac gcaccatgtt gatgtccagg
     1501 gcaagcaaag gtgctgttgc ccatctcaac gtactgcgtc agcgtgtcat aaaacggtgg
     1561 cagcaaattc tcttcatact gacaggctgc ggattccagc tccagccact gctgctcgtt
     1621 gccgttgatt accgccgtaa cgcccgcagg taattcaaca gcatgttcgg aatacaaaaa
     1681 caccggtaga tgaaaaccgg tgcgcttaag caacgcaaga atgccactgc gactatccgc
     1741 agcggtaatg acgactgccg cgacgtccgt aaaatcagta tctcccaacg ccaccacgcg
     1801 acgatgagaa gaaagtcggg ataccagttc actactggcg gcaatattca ttgatttcat
     1861 aagcgcaaac ccgtttcggg gaagtaagaa taccggacaa ggtggaaaac cctgccccat
     1921 gagatatggg tcaaactggt caccagctcc gaccgccaga catcagtaaa agcagaaacg
     1981 ctctgatttt actgttgtcc tgcagtgagc gtgcgttaac ttcaccgcat gagcagtaac
     2041 atagaaaggg aaacgtttcg cgcgaaacgg cgataagcga gagaatgtaa ggaggtggcg
     2101 tgcatcgggc aaactccgta cagagaggag aaaattcgcg caatcatggc acctttcgct
     2161 aaagcgtgca agccaggact ttgcgaccag acaagccatc aacaaggcaa aaagttcata
     2221 ataagaaaat caaacaatac agttaacagg aactcttgtg gtcatcggcc cttttatcaa
     2281 cgctagtgca gtcttactgg gtggcgttct cggcgcactg ctcagccaac gcttaccgga
     2341 acgtatccgc atctccatga catctatttt tggtctggca tcgctgggga ttggtatttt
     2401 actggttgtg aaatgcgcca accttccagc gatggtttta gctacgctac ttggcgctct
     2461 aattggcgaa atttgtttgc tggagaaagg tgtcaataca gcagtcgcca aagcacaaaa
     2521 tctgtttcgt cactcacgta agaagccaac gcatgaatct tttattcaga attatgtcgc
     2581 gattattgtc ctgttttgcg ccagcggcac cgggatcttc ggggcgatga acgaagggat
     2641 gaccggcgat ccgagtattt taatcgccaa gtcatttctt gatttcttta cggcgatgat
     2701 cttcgcctgc tcgctgggta ttgcggtgtc ggtaattagt atcccattac tgatcatcca
     2761 gttaacgctg gcgtgggctg ccgcgctgat attaccgctg accacaccgt cgatgatggc
     2821 agacttcagc gccgtaggcg gtttattgct gctggcaacc ggattacgca tctgtggcat
     2881 taaaatgttc ccggtggtca acatgcttcc agcactcctt ctggcaatgc cgctttccgc
     2941 cgcctggacc gcctggtttg cctgacaatg cgtgcaatag cggcaaagtg atgatagatt
     3001 gtgcagtctg cagtaaattg aagaaatttg attgacgaga cgaggcgaat caggtttaat
     3061 gcgccccgtt gcccggatag ctcagtcggt agagcagggg attgaaaatc cccgtgtcct
     3121 tggttcgatt ccgagtccgg gcaccactaa ttcttaagaa cccgcccaca aggcgggttt
     3181 ttgcttttgg atctgacaat aaccttcacg aaaaaagttt gcttataaag tctgggggaa
     3241 ttactctcgc cacgttaacg agagtaattt tattgatact aatctcctga tactttaccc
     3301 ccgtccaaac tccagccgct gcacattcac catcccagtc ttctcagcag cactggcatc
     3361 aatttgtgtc acccgcagcg catacttttc atccagcgcg tttaaccagt tcagcaggtc
     3421 attaaacacc accggatcta tccagacctg aatattctcc ccacgctcgg ctatccgctt
     3481 gatgactacc gagtgcgcgg aagcactgtc actgataacc cgcgatacct gcgcaggcgt
     3541 tgttgtggcg gattttcgcg ccgcaataat atccggcgcg gcgctcctca gtctggtgtt
     3601 catcgccacc agttgctgca acattgtctc ctgttgtact atccgttcgc tcaacggctg
     3661 ccagatgagg acgtaatatc cgacgctaaa caggaacacc accgctgcca gtaacatgcc
     3721 cttttcacgc ggagaacgcc ccgccaggtg ttgtgccagc cagtgttcgc cacggcttaa
     3781 ctggcgttca cgccattgct gaaaatagtg aataaattta tcgcgtaaca tgttatttcc
     3841 tccgcaacgt tacgccgccg gaaaccgcat caccctcttt ctgtaacgcg tcctgttgca
     3901 caacataatc ggttgccagt gcactacgca gtttgtcgaa actggcaaag ttcgcggccc
     3961 gtagctggag gtgaagtatc tggcgttttt gatcaaaggt aaaaccacgc atttcgatgt
     4021 cggaaagtga cgctgatttc agggtgctgg ctatcgctga caactcggcg agcagccggg
     4081 tatcgtcggc ctgtgggcga tattttttca gcgccatcgt cacctgagag cgtaaattca
     4141 caatccgctt ctgctccggg aacaacgtta agaactgttc ctccgcctgg gtgcggcttt
     4201 gcgccacctg ttcgctgacg ctccataacg tcacgccccg ctccactgcc agcgcaacta
     4261 gaatcagcaa tatcggcaga atcatcaccc gccagcgcgc ccactgtttt cggtagctga
     4321 cgcgaggctg ccacggccct gtcagcaggt tcccttccgg ttcgccataa gtggtaacgg
     4381 cgggcagagc tgtaacggtc aggcgttcag cgtctgcgcc agcccatgct gatagctttt
     4441 ccggtgcaat gccgactacg gttagcgaaa gcggtaaatc ctgctcattg agctgggcgc
     4501 ggaacatgac cggagccagc gcccgcccgg cgctccatcc ccggcattca tcaatgcggc
     4561 agataacccg ttgcgcatcg ccagccataa ccccacaagg aatggacatc cagtctggcg
     4621 cgacggtagc gcgggtgatg ccgttttcct gcaaccactg cgcaatgttg cgcatatgct
     4681 gttggtgaat cactgctacg gttgccagtt gctggtcgat attcaacggg gcgaaatgca
     4741 gttcatcgat atcctggttc agctcttctt ccagtaaggc gggcagaatg gtcggtatct
     4801 gcttacgggc gacatcaggc agttcaacct gccagacgct gatccattcg ccgggaatgt
     4861 agagtcgaat cgcatcggtt tgcagccatt gctggagctg ttcgttagca acgtcagacc
     4921 agataccgtg ctccacatcg ggtgtacggc gctgccaatg gatgggatca gcggcgcaaa
     4981 gcgggaaaaa aatctcaagg atggaactca ctcactttct cctgtctgat gccagagaac
     5041 cgaaaagtgt tgtgggccca tgcggacaat taacgagttc atcgtcagtt caatctcatt
     5101 cacggtgata tctgaacgca gccagaagta attgctgtcc acgctcagga cggtttttag
     5161 ctgtttttta gtacgctcat cgacgtcagc aagtagcggc tgtgcaagaa actgatcgac
     5221 atcttcccag cccttcgccg gacgttgttg taataacgcc cgcgcctgaa cggggcttaa
     5281 ccacgggtca aacagcgcct caagaatcac actttgcgtg acgtctaaag tattgatgtt
     5341 gatttgctgg cggatcatcg gcagcgcaca gaccagcggt ttcagttttt gataaagccc
     5401 ggcgtccatt ccctgtacca cgcgcatctc actgatatca gacagcggtt gattggcggc
     5461 gtagaacggc accgaacggg cgagatactc gctgtcttca cggcctagac gtgtctgcac
     5521 gctgcggtcc tcgtcaataa actcccacag gctttcggct atcagttcgg cccgataagc
     5581 aggcacatcc aggcgcgaga tcagggcaat caactgttgt accgcaagcg gacgcgacgc
     5641 cgttgtcggc tgagcaaggg cattcaggtt aaagcaagcc tgtgcgtcac gcagggtgac
     5701 cgcaatttgc ccctgcggca gagggaagaa acgagggccg gatgcccacg gctgtgccag
     5761 atgcacgcgc ttttcatttt tcaggctcag actgagcgcg ctcagcgcca ggctttccgc
     5821 actggcgctg taccacagcg cctgctggta ctcctgctgg ctgcgcgttc gcccaagttg
     5881 ttgctgcatc cgcccggaaa gcgtgatggt taccagcatc ataaccgcca gcaataccag
     5941 caccacgacc agtgccattc cgcgttttgg tggtgaggtg atcatgatta ttgcggcccg
     6001 cgtaacaacc agatgcgttc aatctcgccc cattgcggcg aatgcagggt catgcgtacc
     6061 gccacaggga tcgcctgtac tgacgaccag ctctcctgcc agcgcgtgcc gtcgtagaac
     6121 tgcaaacgga gcgaatcggc cggaatcaac ttttgcattg tcggcttcac gctgcctgcg
     6181 gcatcggtca gcggccaggc taaccgttcg agataaccgt catgaatgcg gtaaccgacg
     6241 gtgagcagat tgctgcgcgg cagacgcatc aacgggttaa ccacaccgcc gcgcacaaaa
     6301 cgcattcctt cactctcaga cgccagcacg ccagcgccag ccagtaaagc tggttcacgc
     6361 tggccctgat cgcctcttac cggacgcggc atcatttggg tcagatcgtg ggtcagaaaa
     6421 ctcatcgttt gctgcatgag gtttagtttt tgatcgtgat cggcgacggc gctattcacg
     6481 cgcgtgacgc cgttagtcac ctgctgcgcc atcagtgcca gcgaggcaaa aatggcaatt
     6541 gccaccaaca tttccagtaa cgtgaaacca gcgcgagtcc ttctcactgt tggcctccca
     6601 cggcgctaaa ccaggcgcgt cgtgactgaa tcaccgacga aaagtcttcg tgacggctga
     6661 cttcaatatc caccgcctgg agcagcgcgt tgcctgtatt caatgggatt gttcgccagt
     6721 accagcggct tcctgccata tcgctctcgc cctgatgcct gaccgcccgc tgctcacggg
     6781 tcatcaggta gagcagcgca gtctggtttt cagctaccca gcccgctacc gttttttcct
     6841 caagaacgtg ctgattactc agcgcaccgc tggcaatctg taacaccgcc gtggcagcca
     6901 gcgcaaaaat cgccagcacg agcatcactt ccagcaaggt aaatccgcgc ttcatggcat
     6961 cctctcatca cattgattga gggataacgc gccatcgtgt gccagcttta ccgcccaaca
     7021 tgcgttttgc gccgccgagt agaagcgcag cgtaaacggc gtggcgggtt caaaaggcga
     7081 aaaacggatc tgcggcgtct tctttttcgc ctctttttgc aactccagtt caatatcgtg
     7141 cagcgtcagg cgacgacgtt gcagctccag cgcatattcc ttctgccaga tatcacttcc
     7201 gggttgtaac agcatctgca cctgtttcgg caccgtaacc tgtgccgata accgggtcgc
     7261 agaaacgggc aaccactgcc cctgacgacg ctgcataaac tgatagccag gcgggtcgat
     7321 tagcacaccg agtgtctgtc cttcaatcac tgccctgtca ttaaactgcg caaagcgagt
     7381 cagaaaatcc tgtgccgctt ttttcgcggg cggttcagaa tcggtcgcaa acgtctgtac
     7441 cacgcccgca ctggcaaggc cgataaggaa aatcaccagc atgatttcca gaagtgtgaa
     7501 tccgcgttca ggcactgctt actgaaactc ctgcaaattc cagttaccga tatctgcgcc
     7561 agcgccttcc ccgttttcct gaccatccgc ccccagggta taaacatcaa acagtccttt
     7621 ttcacccggg ctgagatact gataatcatt gccccacgga tcctttggca gtcgtttgat
     7681 gtatccacca gtacggtagt tgcgggagtc cgccatattg gctggctgct ggatcagcgc
     7741 ttccagcccc tgttctgtgg tcggataacg cccgttatcc agtcggtaca tatctagtgc
     7801 gttttccagc gccacgatat cgctgatggc tttttgccga tcggctttct ctttgttgcc
     7861 caacaggtta ggcaccacca gacttgccag gacgccaaga ataacaatca ccaccatcac
     7921 ttccagcagg gtaaaacctg cccgtggttt gtgtgtgcgg gataacgaat tcatgtgata
     7981 actccgtaaa ttacattcca accatattat tcagttgcag catcggctcg aggatggcga
     8041 tgacaataaa cagcaccacg cccgccatca tcaccaccag cgcaggctca aacagcccca
     8101 acgccagccc cacctgggta tcaaattccc gttcctggtt aacagcggcc tgctcaagca
     8161 tggtttccag ttcgccgctc tgttcgccgg aagcgatcat gtacagcatc atcggcggga
     8221 acaggcgcaa ctccaccagc gcggcgcgca gactgcttcc ttcgcggacg cgatctgccg
     8281 ccagcagcag ttgttgttcg acatagcgat ttgccgacac ggcggcagcg gtctgaatgc
     8341 cttccagtag cggaacactg ctggcggtga ggatgcttaa tgtgcgggaa aaacgcgccg
     8401 tattcagccc gcgcgcaaca cggcccgtca cgggcagacg cagcaaggtt ttatcccagc
     8461 gcaggcgcat agtcggattt ttaagtagcc attgccccag caccagaagc gccagcaatc
     8521 ccgccagcca gtaaacgccg ctggcctgta acgcatcact catggcgata agcgcacggg
     8581 tggaggaggg tagcgcgtgt ccgagatgat caaactgttc gatgattttc ggcaccactg
     8641 ccgtcagcaa aatagtgacc acgcccgttg ccaccaccag cataaccagc ggatagagca
     8701 tggcctgcaa tagacgtgat ttcaggcgct gtcgctgttc ggtgtaatct gccaggcgat
     8761 tgagcaccac gtcgagatgc ccggattttt ctccggcagc gaccatcgaa caaaacaggg
     8821 aatcaaagac gcggggatgt tcgcgcaggc tgtccgacag ggtataacct tcctgaatcc
     8881 ggctgcgcag cgccattccg aggctcttca catgcagttt ttcactttgc tcactgaccg
     8941 cctgcaagca ggtttccaac ggcattgctg cctgcaccag cattgccagt tggcgcgtga
     9001 acagcgccag atctgccgcc gccacgcgac gatgtgcgtg ccgccgacgc tgcaacattc
     9061 cccctgccga tgcattcatc ctggcttcaa tgtgcacggg gataagctct ttaccgcgca
     9121 acaactggcg ggcatgacgc gcggaatccg cctcaatcat gcctttggtt ttgcgaccat
     9181 tacgctccag cgcctgatag taaaacagtg ccattacgcc tccatggtta cccgcagaac
     9241 ttcatcgaga gaggtttctc cggcgagcac tttctcaatg ccgttgctgc ggatacccgc
     9301 agagtgttgc cggacataac gttccagctc cagctccccg gcctgacggt ggatcaaatc
     9361 acgcaatgtg gcatccacca cgtcagctca tggatggcag tccgtccgcg gaaacctttg
     9421 tgattacagg cggggcagcc ctgcggatgg tacagagtga cggttcgcgc atcagtaatg
     9481 cccagcaggc gtttttcttc gtcagtggca ggcgcggcct gacggcagtc gggacacagc
     9541 gtgcggacca gtcgctgcgc catcacgccc gtcagactgg aagagagcag gaaaggctcc
     9601 acgcccatat cctgcaaacg cgtgatcgcc cccaccgccg tgttggtatg cagcgtggaa
     9661 aggaccaggt gtccggtaag cgatgcctga acagcgattt ctgcggtttc ggtatcgcgg
     9721 atttcaccga ccatcaccac atccgggtcc tgacgcaaaa tcgcgcgcag gccacgggcg
     9781 aaggtcatgc cgacgcgggt gttaacctgt gtctgaccga tcccttcaat catgtattcg
     9841 atggggtctt caaccgtgag aatgttacgc gaatggttgt tcagctcctg caatccggcg
     9901 tacagcgtgg tgcttttgcc ggaacccgtc ggccccgtca ccagaaagat gccgtgcggt
     9961 ttgtgtaaca gctggcgcaa ctgcacggtc agttgctggc taagccccag acgctccagc
    10021 gtcaggcggg cctggttttt gtccagcagt cgcagcacca cgcgctcgcc ccaggcagaa
    10081 ggcatggtgg agacacgcac gtcaatcgcc cggccgccca gcagcagcgc aatacgtcca
    10141 tcctgcggta cgcgcttttc ggcgatatcc agccgtgcca tcaccttgat acgcgatacc
    10201 agcagcgagg ccagtttgcg ccccgggcgc agcatttcat gtaatgtgcc gtcaacgcga
    10261 aaacggatca ccagactctt ttcaaacgtc tcgatgtgga tatccgaagc gccttcttta
    10321 atcgcctctg ccagcatggc gttgatcagt ttgatgatcg gcgcatcgtc gtcactttcc
    10381 agcagatctt ccgtttctgg cagttcttcc gcgagagtaa aaaagtcctc agcagaaccg
    10441 agatcttcca tcagctggcg agcctcggaa gagtcccgct gccagaccgc attcagccgc
    10501 tgttcaaatt cggcctcgtc gatttgccgc agcgtaaagg gcgcgttcag cccccgctgc
    10561 agctcctgca aaacagagag cgatagcgga tgaacgtgga ggatctccag cgacgcttcg
    10621 caccatgcca ccaggctaaa ccgacggctg aaactgtagg gcagacgcac ggtgttggcg
    10681 gtggtttcct gtgctacagg caccattaac gcgttctccc ggcattgagg aacgcgcgaa
    10741 cttccggcgg taaggcctgg ttttgcgctg gcagtaccgg ctgtgcggtg tgcggcatca
    10801 ggcttaaacc ttgctcatca cgatagatct gttcggcgcg catatagtta tatttgcgct
    10861 gcgacacgcc gtctgccgcc ataccgtcac gcagaatggt cgggcggata aacaccatca
    10921 ggttacgttt ttctttttta tccgccgtcg atttaaacag gttaccaatc aatgggatat
    10981 cgcccagcag aggcactttc gccacgcttt ctcccgcctg atcgtccatc agaccaccaa
    11041 gcacaatcag ctcaccatcg ttagccagca cggtggtttt cagtttgcgc tcaccaaaca
    11101 ccacgtcgag gctggtctgt ccttccacct tcgagacttc ctgctcaatc accatctgta
    11161 ccgcgttacc ttcgttaatc tgcggcgtga ctttcagcat gatgccgact tttttccttt
    11221 ctactgtatt gaaaggattg ctgttattgg agccaacggt agagccggtt aataccggaa
    11281 cgtcctagcc caccatgaag aaggcttcct ggttgtccag cgtagtgatg ctcggcgtgg
    11341 agagaacgtt cgagctggag tcgtttttaa ccgcctgcac cagtgccatc cagtcgcctt
    11401 tcaccacgcc aaccgccgta ccgctaaatc cagaaagaag ctgggcgagt gtggagagat
    11461 cgccgttggt atccggatta atggtggtag cgccgttttc actgatcacc gtcgagcctt
    11521 tctgcggttt cgcctgagaa atggctgccc ccagcgtacc gatagggatc tgcgtaccat
    11581 tagcaaactg cattaatccg gcatctttcg acgcccactg cacggcgaat atccagttat
    11641 tcaattacgc tttgcagcga ctgcatgatg tcctgcggcg cggttacaat cagggcatta
    11701 ctgtgtttgc tggcggcgat ggatacaacc tcacgcccgc taccgaccgt gccttccgcc
    11761 tcttctttag ccgccgtgag cgtgccgctg acctgtttca gcacatcgac cagatcttcg
    11821 gctttgctgt atttgagata gaaaacctgg ctgttgccgc tgcgttccat ttctgagtcc
    11881 agccgacgga tcaggcggcg cattttgtcc cgcgtggccg ggtcaccact gacaatcaca
    11941 ctgttggtgc gttcgtcggc gacaatttga gatttcagcg tcgcaggctg gttctcgccg
    12001 ctgtttttcg tcaggctttc cagcacgcgg gcgatttccg aagccgaggc gttatccagc
    12061 gggatcacct cttcggtgcg attacccgcg tgatccacgc gctggatcac ttccgtcagg
    12121 cgctccacaa cggaggcgcg tccggtgagc ataatcacgt tggagggatc gtaattaaca
    12181 acgttgcctg agcctgcgct gtcgatcatc tggcgcagaa tcggtgccag ctcgcgtacc
    12241 gacacattac gtaccggcac tactttggtg accatttcat cgcccgcgta gttgtcgctg
    12301 ccttcaccga ccagcggcag cggctcgact ttcgcagcgc tggatttcac caccttcagc
    12361 acgtcgtttt ccatcggtac gacggcatac ccctgtgctt ccagcaggtt aaggaatagc
    12421 tggtaatact ggcgttcatt gagcggggtc atggtgcgaa tactcacttt cccctgtacg
    12481 cccggcccca taatgatggt tttattaagg ttagcgccga cggtttcgat gaacgatttc
    12541 aggtcggtat ctttaaaatt agcggtgaaa gtggcttctt ccgcccagac cggtgaactg
    12601 cataatgccg ctgccagcac cagcggcagt aaacgctttt ttgttttgag gccagttgtc
    12661 ttcttacgcc agaccgacaa cgtaatatca cgccaaaaca cgatgaatga ttctcctgga
    12721 ttaaatgcgg ttagcgcagc gcgatggaaa tgtcgtggcg cgcacccttg cgtaaaaccg
    12781 taagttgaat ggaatccatt gaaggtaact gtcgcatcag agcaatcatt gctcgtggat
    12841 cagtgaaatc ctgctgattt agcgcaatgg cgatatcgcc ttccttgaaa ccgctggcat
    12901 cgaacagaga acgatctgcc cccggcttca ctgcataacc gacaattccc tccttacgca
    12961 caggcgtaag ctggatatag ttaaaaattt tctgcggatc tttcgccagt gcctgacgca
    13021 cggcagtcgg tatctcaact ggcgcactga cagcaggttc agcaacagct tgctttgctt
    13081 cgtcactgac agcttttttg ttggtcgcgg caacggtgga acgctcctct tcagccaagc
    13141 tcaggcgctc tatttttccc tgatagcgca gcatcacatg gtcgcgattg atttcctcaa
    13201 tcaccgcgtt gtgcgagcca agcgtttcac cctgcaaata gacctgctgt ttaccgcctt
    13261 cttcaataac cgcgccgggt ctggcaccaa aggcgatccc gcgcagcacc acattaagac
    13321 gcgtttctgc cacaggcaca ggttcgggtt gttttaccgg cgtggcgacg ggctgatatt
    13381 tgccaaacca gttttgctgg ctgattaatt gcacgtcatt tttatcgaac gtttttgcat
    13441 ccgcacgggg cggtttattc gccgatgggg aaacagccgt atattccgca gaaaaggaga
    13501 aatagcgcca gagtgaatgc gccacttttg cagaaataat aagcagcatc agccagaaca
    13561 tcccgcgtac aatttttggt aatgactcca acttactgat agt
//
LOCUS       DADMHC010000104        13533 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.104, whole genome shotgun sequence.
ACCESSION   DADMHC010000104 DADMHC010000000
VERSION     DADMHC010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13533
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.104"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(190..1563)
                     /gene="cobA"
                     /locus_tag="JNZ57_002502"
     CDS             complement(190..1563)
                     /gene="cobA"
                     /locus_tag="JNZ57_002502"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HAY8828692.1"
                     /translation="MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLDAGARLTVNALA
                     FIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDTLNQRVSEAAEARRIFCNV
                     VDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPLHLGQVAKYAGQ
                     LRGRVKQQFTTMSERRRFWEKLFVNDRLAQSLANNDQKAITETTEQLINEPLDHRGEV
                     VLVGAGPGDAGLLTLKGLQQIQQADVVVYDRLVSDDIMNLVRRDADRVFVGKRAGYHC
                     VPQEEINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCNAGIPFSVVPGITAAS
                     GCSAYSGIPLTHRDYAQSVRLITGHLKTGGELDWENLAAEKQTLVFYMGLNQAATIQQ
                     KLIEHGMPGEMPVAIVENGTAVTQRVIDGTLTQLGELAQQMNSPSLIIIGRVVGLRDK
                     LNWFSNH"
     gene            complement(1582..2388)
                     /gene="nirC"
                     /locus_tag="JNZ57_002503"
     CDS             complement(1582..2388)
                     /gene="nirC"
                     /locus_tag="JNZ57_002503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026212.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite transporter NirC"
                     /protein_id="HAY8828693.1"
                     /translation="MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIIL
                     IFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMW
                     AILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALC
                     NWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYT
                     LAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKSNRPVADKFNQTETAAG"
     gene            complement(2515..2841)
                     /gene="nirD"
                     /locus_tag="JNZ57_002504"
     CDS             complement(2515..2841)
                     /gene="nirD"
                     /locus_tag="JNZ57_002504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase small subunit NirD"
                     /protein_id="HAY8828694.1"
                     /translation="MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISN
                     IDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDG
                     VVQLRG"
     gene            complement(2838..5381)
                     /locus_tag="JNZ57_002505"
     CDS             complement(2838..5381)
                     /locus_tag="JNZ57_002505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase large subunit"
                     /protein_id="HAY8828695.1"
                     /translation="MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAY
                     DRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFY
                     DKLIMATGSYPWIPPIKGSDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEA
                     AGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGV
                     EARKTMRFADGSELEVDFIVFSTGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDI
                     YAIGECASWNNRVFGLVAPGYKMAQVAVDHILGSENAFEGADLSAKLKLLGVDVGGIG
                     DAHGRTPGARSYVYLDESKEIYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIE
                     LPENPDSLILPAHSGSGKPSIGVDKLPDSAQICSCFDVTKGDLIAAINKGCHTVAALK
                     AETKAGTGCGGCIPLVTQVLNAELAKQGIEVNNNLCEHFAYSRQELFHLIRVEGIKTF
                     EELLAKHGKGYGCEVCKPTVGSLLASCWNEYILKPEHTPLQDSNDNFLANIQKDGTYS
                     VIPRSPGGEITPEGLMAVGRIAREFNLYTKITGSQRLAMFGAQKDDLPEIWRQLIEAG
                     FETGHAYAKALRMAKTCVGSTWCRYGVGDSVGLGVELENRYKGIRTPHKMKFGVSGCT
                     RECSEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLLAADIDRETLIKYLDRFMMFY
                     IRTADKLTRTAPWLENLEGGIDYLKAVIIDDKLGLNAHLEEEMARLREAVVCEWTETV
                     NTPSAQTRFKHFINSDKRDPNVQMVPEREQHRPATPYERIPVTLVEDNA"
     gene            complement(5643..6824)
                     /gene="tsgA"
                     /locus_tag="JNZ57_002506"
     CDS             complement(5643..6824)
                     /gene="tsgA"
                     /locus_tag="JNZ57_002506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter TsgA"
                     /protein_id="HAY8828696.1"
                     /translation="MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFNLPVSS
                     MSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFLLMVLAVAGLMFSHSLALFSTA
                     MFILGVVSGITMSIGTFLITQMYEGRQRGSRLLFTDSFFSMAGMIFPMIAAFLLAHSI
                     EWYWVYACIGLVYVAIFILTFGCEFPALGKHAPKTDAPVEKEKWGIGVLFLSVAALCY
                     ILGQLGFISWVPEYAKGLGMSLNDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTV
                     LAGLAAILMYVFNTGTPAHMAWSILALGFFSSAIYTTIITLGSQQTKVPSPKLVNFVL
                     TCGTIGTMLTFVVTGPIVEHSGPQAALLTANGLYAVVFVMCFLLGFVSRHRQHNTLTS
                     H"
     gene            7095..7667
                     /gene="ppiA"
                     /locus_tag="JNZ57_002507"
                     /gene_synonym="rotA"
     CDS             7095..7667
                     /gene="ppiA"
                     /locus_tag="JNZ57_002507"
                     /gene_synonym="rotA"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000920493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase A"
                     /protein_id="HAY8828697.1"
                     /translation="MFKSTLAAMAAVFALSALSPAAMAAKGDPHVLLTTSAGNIELEL
                     DKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEAD
                     NGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVAD
                     KISQVPTHDVGPYQNVPSKPVVILSAKVLP"
     gene            7772..7939
                     /locus_tag="JNZ57_002508"
     CDS             7772..7939
                     /locus_tag="JNZ57_002508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfG family protein"
                     /protein_id="HAY8828698.1"
                     /translation="MKKLTDKQKSRLWELQRNRNFQASRRLEGVEMPLVTLTVAEALA
                     RLVELRRHYER"
     gene            7929..8531
                     /locus_tag="JNZ57_002509"
     CDS             7929..8531
                     /locus_tag="JNZ57_002509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative adenosine monophosphate-protein
                     transferase Fic"
                     /protein_id="HAY8828699.1"
                     /translation="MSDKFGEGRDPYLYPGLDIMRNRLNIRQQQRLEQAAYEMTALRA
                     ATIELGPLVRGLPHLRTIHRQLYQDIFDWAGQLREVDIYQGDTPFCHFAYIEKEGNAL
                     MQDLEEEGYLVGLEKTKFVERLAHYYCEINVLHPFRVGSGLAQRIFFEQLAIHAGYQL
                     SWQGIEKEAWNQANQSGAMGDLTALQMIFSKVVSEAGESE"
     gene            8563..9126
                     /gene="pabA"
                     /locus_tag="JNZ57_002510"
     CDS             8563..9126
                     /gene="pabA"
                     /locus_tag="JNZ57_002510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component 2"
                     /protein_id="HAY8828700.1"
                     /translation="MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKP
                     QKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHG
                     KTSPITHNGEGVFRGLANPLTVTRYHSLVVEPGSLPACFDVTAWSETREIMGIRHRQW
                     DLEGVQFHPESILSEQGHQLLANFLHL"
     gene            9212..10432
                     /gene="argD/dapC"
                     /locus_tag="JNZ57_002511"
     CDS             9212..10432
                     /gene="argD/dapC"
                     /locus_tag="JNZ57_002511"
                     /EC_number="2.6.1.11"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     acetylornithine/succinyldiaminopimelate transaminase"
                     /protein_id="HAY8828701.1"
                     /translation="MAIEQTAITRATFDEMILPIYAPAEFIPVKGQGSRIWDQQGKEY
                     VDFAGGIAVTALGHCHPALVNALKTQGETLWHISNVFTNEPALRLGRKLIEATFAERV
                     VFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDG
                     FGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVTASTPEFLQGLRELCDQ
                     HQALLVFDEVQCGMGRTGDLFAYMYYGVTPDILTSAKALGGGFPISAMLTTAEIASAF
                     HPGSHGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSD
                     IRGMGLLIGAELKPHYKGRARDFLYAGAEVGVMVLNAGPDVMRLAPSLVVEDADIDEG
                     MQRFAHAVAKVVGA"
     gene            complement(10499..12589)
                     /locus_tag="JNZ57_002512"
     CDS             complement(10499..12589)
                     /locus_tag="JNZ57_002512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828702.1"
                     /translation="MWRRLIYHPDINYALRQTLVLCLPVAVGLMLGELRFGLLFSLVP
                     ACCNIAGLDTPHKRFFKRLIIGASLFATCSLLTQLLLAKDVPLPFLLTGLTLVLGVTA
                     ELGPLHAKLLPASLLAAIFTLSLAGYMPVWEPLLIYALGTLWYGLFNWFWFWIWREQP
                     LRESLSLLYRELADYCEAKYSLLTQHTDPEKALPPLLVRQQKAVDLITQCYQQMHMLS
                     AQNNTDYKRMLRIFQEALDLQEHISVSLHQPEEVQKLVERSHAEEVIRWNAQTVAARL
                     RVLADDILYHRLPTRFTMEKQIGALEKIARQHPDNPVGQFCYWHFSRIARVLRTQKPL
                     YARDLLADKQRRMPLLPALKSYLSLKSPALRNAGRLSVMLSVASLMGTALHLPKSYWI
                     LMTVLLVTQNGYGATRLRIVNRSVGTVVGLIIAGVALHFKIPEGYTLTLMLITTLASY
                     LILRKNYGWATVGFTITAVYTLQLLWLNGEQYILPRLIDTIIGCLIAFGGTVWLWPQW
                     QSGLLRKNAHDALEAYQEAIRLILSEDPQPTPLAWQRMRVNQAHNTLYNSLNQAMQEP
                     AFNSHYLADMKLWVTHSQFIVEHINAMTTLAREHRALPPELAQEYLQSCEIAIQRCQQ
                     RLEYDEPGSSGDANIMDAPEMQPHEGAAGTLEQHLQRVIGHLNTMHTISSMAWRQRPH
                     HGIWLSRKLRDSKA"
     gene            complement(12640..13272)
                     /gene="crp"
                     /locus_tag="JNZ57_002513"
     CDS             complement(12640..13272)
                     /gene="crp"
                     /locus_tag="JNZ57_002513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cAMP-activated global transcriptional regulator
                     CRP"
                     /protein_id="HAY8828703.1"
                     /translation="MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIV
                     KGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKK
                     FRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTH
                     PDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR"
BASE COUNT         3268 a         3492 c         3552 g         3221 t
ORIGIN      
        1 agactgctcg ttaagaacga tacaggaata tttaattggc gtcagtgagc gaatgactta
       61 attttgtaag tcgctgtaac ggtgaatata acccattagc agataatatt tattaagggg
      121 ttatgtttta tttgctgaat atataaaaag agtcattaag aaggccagaa ttctctggcc
      181 cgggttaaat taatggttgg agaaccagtt cagtttatcg cgcaggccaa caacccgacc
      241 aataataatt agcgatggac tgttcatttg ctgagcaagt tcaccgagtt gcgtgagcgt
      301 accgtcaatc acgcgctgcg tgactgccgt tccgttttcg acaattgcca ccggcatttc
      361 gccaggcata ccgtgttcaa tcagcttttg ctgaatagtc gcggcctgat tcaaccccat
      421 atagaacacc agcgtctgtt tttctgccgc caggttttcc cagtccagct cgccaccggt
      481 ttttaagtgt ccggtaatta agcgtacgct ctgggcataa tcgcgatgcg tgagtggaat
      541 acccgaatag gcagagcaac cagaagctgc ggtaataccc ggaaccaccg agaacggaat
      601 acccgcgttg cacagtgttt ccagctcttc gccaccacgg ccaaaaataa acggatcgcc
      661 acctttcagc cgcaccacgc gtttgccttt ttgcgcttcc cgcagcagga tctggttaat
      721 ctcttcctgc ggtacacagt ggtatcccgc gcgtttgccg acgaaaacgc gatcagcatc
      781 gcggcgtacc agattcataa tatcgtcaga aaccagacgg tcgtagacca ccacatctgc
      841 ctgctgaatt tgttgcagtc ctttcagcgt cagcagcccg gcatcgcccg gacctgcacc
      901 aaccagcacc acttcaccgc gatggtcgag cggttcgttg attaactgtt cggtcgtttc
      961 agtaatggct ttctgatcgt tgtttgccag cgactgcgct aggcggtcgt taacgaacaa
     1021 tttctcccag aaacggcgac gctcactcat cgtggtgaac tgttgtttca ctcgcccgcg
     1081 taattgcccg gcatatttcg ccacctggcc cagatgcaac ggcagcagtg attcgagttt
     1141 ttcgcgcaac aggcgcgcca gaaccggaga ggtgccgcca gaggagaccg ctaccattag
     1201 cggtgagcgg tcaataatcg acggcataat aaagctggcg gctttcggcg catcgactac
     1261 gttacagaag atgcgacgag cttcagcggc ttcgctgacg cgctggttaa gcgtgtcatc
     1321 atccgtcgct gcaatcgcca gccagcaggt gtcgagaagg ctttcatcaa atggcccttc
     1381 gacgagggtt aacatgcctg catctgccca tgcggtgaac tgtggaataa acgctaatgc
     1441 attcaccgtt aagcgagcgc ctgcgtctaa cagcaacctt gctttgcgtt ccgcgacatc
     1501 accaccgccg acaatcagac agtcgcgatc gcgtaattgg caaaatatag gcaaatgatc
     1561 cacgtaaaaa ccccttagta attaaccggc agccgtttca gtttgattaa atttgtccgc
     1621 aaccggacga ttcgatttcg gcgtagcata ccaataaccc aatcccatga atacggcacc
     1681 tgataaagta ttacccagcg tcacccacag caggttatga ccaatacccg ccagcgtgta
     1741 ggcttcgctg tggttgccga accaggagag cgcgaacagc gtcatgttag cgatagagtg
     1801 ctcgtagccg gacgcgataa atgccagcag acaccaccag atagcgataa atttcgccgc
     1861 cccttcagtg cgcagcgcca tccagattgc caggcaaacc agccagttac acaatgcacc
     1921 tttgaagaag agtaccattg ccggtgcagt ggttttagcc agcgcgacgg agtgaacgat
     1981 gctggtatct accggcagca ggctaccgcc gccccagcta tagagcatgg caacgaagac
     2041 ggaaccgacc aggttaccca gccaggtttg cggcaggatt gcccacattt gcccgtggct
     2101 gatgctgccc gcttttaccc caaaggtgag gaacatggtg tgtccggtga acagttcaga
     2161 accggcgata atcaccagcg ttaaggcgat accaaaggtc gcgcccatca ccagcggacg
     2221 tacggacggg tcgagcaaat taccgagcgt gaaaatcaag atgatcccaa gacccacata
     2281 cgcgcccgcc atggcggagc tgacccaaaa gccgagcggg ttatttgccg acaggcgtgc
     2341 aatgcgcgca gcgttagccg cacacttatt aatagtgtct gtaaacattt gattatcctt
     2401 taaaaaataa aaacaaaaaa ataaaacaaa aagtttaaaa aatgtcctgc aatataccga
     2461 aggtcattac aggaccatgc aaaaagggga ggcattgcgc ctcccgttaa aacattaacc
     2521 gcgcagctgc accacgccgt ctttcactcg tgcttcgtaa tgtttgacgg aaaactgttc
     2581 gtcttccatg cacaagccat cacttaagcg aaaacgctgt tttttcagcg ggctggcgac
     2641 ccacagctcg ccctggtgtt ccgcaatcag cccgcgtgac agcacgctgg actcgaagaa
     2701 cggatcgatg ttgctgatcg caaacacctg gtcgctgtga tacgggcgga aaatcgcgac
     2761 ctgctcgtcg cctaacagcg cgcagacgcc ggtttcaggc aggatgtcat cgattttgca
     2821 gatgtctttc cactggctca tgcgttgtcc tccaccagag ttaccgggat acgttcatac
     2881 ggcgttgccg gacggtgctg ttcgcgctct ggcaccatct gcacgttcgg gtcacgcttg
     2941 tcgctgttga tgaagtgttt gaagcgagtc tgcgcggacg gtgtattgac cgtttcagtc
     3001 cactcacaca ctaccgcttc acgcaggcgc gccatctctt cttctagatg agcgttcagc
     3061 cccagtttgt cgtcaatgat caccgctttc aggtaatcga tgccgccttc gaggttttct
     3121 aaccacggcg cggtacgcgt cagtttgtcg gcggtacgga tgtagaacat catgaagcgg
     3181 tcgagatatt tgatcagcgt ttcgcgatcg atatccgctg ccagcagatc cgcatgacgc
     3241 ggtttcatgc cgccgttgcc gcaaacatac aggttccagc ctttttcagt ggcgataata
     3301 cccacgtctt taccctgagc ttctgaacat tcacgggtac agccggagac accgaacttc
     3361 attttgtgcg gcgtacggat gcctttgtag cggttttcca gttccacgcc gaggccgacg
     3421 ctgtcgccaa cgccgtagcg gcaccaggtg ctacccacgc aggttttcgc catacgcagt
     3481 gctttcgcat aggcatgacc ggtttcgaag ccggcttcaa tcagctgacg ccagatctct
     3541 ggcagatcgt ctttctgtgc gccaaacatc gccaggcgct gggaaccggt gattttggtg
     3601 tagagattaa attcacgcgc gatacgaccc actgccatca gcccttccgg ggtgatttca
     3661 ccgcccggag aacgcgggat caccgagtag gtcccgtctt tctggatgtt agcgaggaag
     3721 ttgtcgttag aatcttgcag cggagtatgt tctggcttca gaatgtattc gttccagcag
     3781 gaggccagca gcgaaccgac ggtcggttta caaacttcac aaccgtagcc tttgccgtgt
     3841 ttcgccagca gttcttcgaa ggttttaatg ccttcaacgc ggatcaaatg gaacagttcc
     3901 tgacgcgaat aagcaaagtg ttcgcacagg ttgttgttaa cttcgatgcc ctgtttcgcc
     3961 agttccgcgt tcagtacctg agtgaccagc gggatacagc caccgcagcc agtacccgct
     4021 ttggtttcag ctttcagcgc cgcaactgtg tggcagcctt tgttgatggc agcaatcaga
     4081 tcacctttag tgacgtcgaa gcaggagcag atttgcgcgc tgtccggcag tttatcaaca
     4141 ccgatagacg gcttaccgct acccgagtgc gccggcagaa tcagagaatc cgggttttcc
     4201 ggcagctcga tagcattcag caccagttgc agcaagttac cgtagtcgct ggtatcgccc
     4261 accagtaccg caccgagcag ggttttgttg tcttcgctga cgatcaggcg tttgtagatc
     4321 tctttgcttt cgtcgaggta aacgtagcta cgtgcgccag gcgtgcgacc atgagcatca
     4381 ccaataccgc ctacgtccac gcccagcagt ttcagcttgg cgctaaggtc agcaccttca
     4441 aaggcgtttt cgctaccgag aatatggtca acggcgacct gcgccatttt gtagccaggt
     4501 gctaccagac caaatacacg gttgttccag cttgcgcatt caccgatagc gtagatatcc
     4561 ggatcggaag tttggcagga atcattaatg acgatacccc cacgcggagc aacgtccaga
     4621 ccacactggg ttgccagctt atcgcgcgga cggataccgg tagagaagac gataaagtcg
     4681 acttccagtt cgctgccgtc ggcaaaacgc atggttttac gtgcttcgac accttcctgc
     4741 acaatctcaa gggtgttttt gctggtgtga acgcgcacgc ccatactttc gattttgcga
     4801 cgcagctgct cgccacccat ctgatcaagc tgttccgcca tcagcatagg ggcaaattcg
     4861 ataacgtggg tttcaatacc taagtttttc agcgcgccag cggcttccag acctaacagg
     4921 ccgccaccaa caacggcacc gcgtttgctg cgacgggcgc aggattcaat ggcgttgagg
     4981 tcttcaatgg tgcgatagac aaagcagtcc tgagtatcag aacctttgat tggtgggatc
     5041 cacgggtagg aaccggttgc catgatcagc ttgtcataaa aaacggtacg tccggcgctg
     5101 gagtgaatca ccttctcctg acggttgatg gtgatagcgc gttcgccgac cagaactttg
     5161 atgccgtgtt tctcgtagaa gccttcgcgc accagcgaca gctcttcggc ggtgtggtga
     5221 gagaagtaag acgagaggtg tacgcggtca taagcgatgc gcggttcttc acagaaaacg
     5281 gtaatatcaa agttggccgc atcagattta tcaagaagat cttcgataaa gcgatggccg
     5341 accataccgt taccgataat tgcgagtctg actttgctca tttttgcctc gatttctttt
     5401 ctattaccgc ctaccttaac gattcagcaa ccccgcttat tgatgtaaat caaattcacc
     5461 tttatatacc ccttaagggg catattgctg atttgtataa attttcttaa gtcacggaat
     5521 tgtctgacat ttcatgtttg tgcaaaaaat agacaaaatg aacgggttta tagaaataga
     5581 tgcacgtagc ggggttagag aggaaaaggc cggacgacga tagtgccgtc cggcattagc
     5641 aattaatgag aggtcagggt gttatgctga cggtgacggc tgacgaaacc taacaggaag
     5701 cacatcacaa agacgacagc gtacagaccg tttgctgtaa gcagtgccgc ctgcggaccg
     5761 ctatgttcaa caatcgggcc ggtaaccaca aaggtcaaca tagtaccgat ggttccgcag
     5821 gtcaggacaa agttaaccag ttttggcgac ggtactttgg tctgctgtga acccagggtg
     5881 atgatggtgg tatagatcgc gctggagaag aagcccagag cgagaattga ccacgccata
     5941 tgtgctggtg ttccggtgtt aaagacgtac atcagaatcg cagccagacc agccagtacg
     6001 gtcagaatgc gttgcaaatc aaagaagcga agaataaagc tgaacgccca catgccgacc
     6061 atgtatgaca tccagaagtt actcaccagc gtgcccgcgt cgttcaggct catgcccagg
     6121 cctttggcat actcaggcac ccaggagata aaacctaact gaccgaggat gtagcacagc
     6181 gccgcaacag agagaaacag tacgccgatc ccccactttt ctttctctac cggagcatcc
     6241 gtttttggtg catgtttgcc cagtgctggg aactcacagc cgaaggtcag aataaaaata
     6301 gcgacataca ccagcccgat gcaggcataa acccagtacc actcaatgct gtgcgccagt
     6361 agaaacgcgg cgatcattgg gaaaatcatc ccagccatac tgaagaagga gtcagtaaat
     6421 aacaggcggg aaccgcgctg acgcccttca tacatttgtg ttatcaggaa tgtaccaatc
     6481 gacatagtaa tgccgctgac caccccgaga atgaacatcg ccgtcgagaa cagcgccagg
     6541 ctgtggctga acatcaaacc ggcaaccgcc agcaccatca ggagaaagcc aaaacgtaac
     6601 tgcgttttca acgggacgat ttccatcagc caggcgttga ggaagataga gattaaaatg
     6661 ccggcgttga ggaaggtgaa ggtgttactc atactggaaa caggcagatt gaaataatcg
     6721 gcgatatttc ccatcaccat cccggtgaca ataaccaacg caccagtcag tgcgtaggag
     6781 agaaagctaa tccatgtgag cttgatgcga ttgctgttag tcatgattgg cctgcgttca
     6841 aaaataaaat ggcatagcgg gatatgccgc gagcgggtga ttttaggtga ttttgtgatc
     6901 tgtttaaatg ttttattgca atcggttgct aaattgcatt ttaagaggtg atcttgatca
     6961 cggaataaaa agtgatcgtc aggttacata tatttcagat acgtaaaatt aggtaaaggg
     7021 atggccttgt tcttgaaggc tatttagaat ctcttcactt gctttttttc tgctctgttt
     7081 gttaaggaaa tctcatgttc aaatcgaccc tggcggcgat ggctgctgtt ttcgctcttt
     7141 ctgctctttc tcccgcagca atggcagcga aaggggaccc gcacgtattg ttgacaacct
     7201 cagctggtaa catcgaactg gagctggata aacaaaaagc gccagtgtct gtgcaaaact
     7261 ttgtcgatta tgtgaacagc ggtttttata acaacactac ctttcaccgc gtcattcctg
     7321 gctttatgat tcagggcggc ggtttcaccg agcagatgca gcagaaaaaa ccaaacccgc
     7381 caatcaaaaa tgaagccgat aacggcctgc gcaacacgcg tggcaccatc gcgatggcgc
     7441 gtaccgctga caaagacagc gccaccagcc agttctttat caacgttgcc gataacgcct
     7501 tccttgacca tggtcagcgt gatttcggtt acgcggtatt tggtaaagtg gtgaaaggca
     7561 tggacgtggc cgataagatt tcccaggtgc cgactcatga cgttggtccg taccagaatg
     7621 tgccgtcaaa accggtagtt atcctttccg ctaaagtcct gccgtaatga tttctcgcgc
     7681 gggcaatctt gcccgcgctt ctgctctccc ggcgtaaccc ggatttgccg cttatacttg
     7741 tggcaaatgg acacgttcag ggaggcatca agtgaagaaa ctcaccgata agcaaaagtc
     7801 ccgtctctgg gagcttcagc gtaatcgtaa tttccaggcc agtcgccgtc ttgaaggcgt
     7861 cgagatgcct ttagtcactc ttactgtcgc agaggcttta gcgcgccttg tagagctgag
     7921 gaggcactat gagcgataaa ttcggcgaag ggcgcgatcc gtatctttat ccaggccttg
     7981 atatcatgcg taaccggctg aacatccgcc agcaacaacg gctggaacag gccgcttacg
     8041 aaatgacggc gctgcgtgct gcgaccattg agcttggtcc gctggtgcgc ggtttaccgc
     8101 atttgcgaac tatccatcgc cagctgtatc aggatatttt cgactgggca gggcaactgc
     8161 gtgaagttga tatttatcag ggcgatacgc cgttctgcca ctttgcttat atagaaaaag
     8221 agggcaatgc cctgatgcag gatctggagg aagaaggtta tctggttggc ctggagaaaa
     8281 cgaagttcgt cgagcggctg gcgcattact attgtgaaat caacgtgctg catcccttcc
     8341 gggtgggaag tggtctggca cagcggatct tcttcgagca actggcgatt catgccggat
     8401 atcaactgag ctggcagggt atcgaaaaag aggcctggaa tcaggcaaat cagagtgggg
     8461 caatggggga tctcaccgca ctgcagatga tatttagcaa agtggtaagc gaagccgggg
     8521 aatctgagta aaatagcgcg gttctttcgt accggagccg ccatgatcct gcttattgat
     8581 aactacgatt cttttacctg gaacctctac cagtactttt gtgaactggg ggcggatgtg
     8641 ctggttaagc gcaacgatgc gttgacgttg gcggatatcg acgcccttaa accacaaaaa
     8701 attgtcatct cacccggccc ctgtacgcca gatgaagccg ggatctccct tgacgttatt
     8761 cgccactatg ccgggcgctt gccgattctt ggcgtctgcc tcggtcatca ggcaatggcg
     8821 caggcatttg gcggtaaagt tgtgcgcgcc gcaaaggtca tgcacggcaa aacctcgccg
     8881 attacacata acggtgaggg cgtatttcgg gggctggcaa atccacttac cgtgacacgc
     8941 taccattcgc tggtggtgga acctggctca ttaccagcgt gctttgacgt gacggcctgg
     9001 agcgaaaccc gcgagattat ggggattcgc catcgccagt gggatctgga aggtgtgcag
     9061 ttccatccag aaagtattct tagcgaacaa ggacatcaac tgctggctaa tttcctgcat
     9121 ctctgatttc cgattgccat tcagtgattt tttatgcata ttttgtgatt ataatttcac
     9181 atttatttat gcgtaacagg gtgatcatga gatggcaatt gaacaaacag caattacacg
     9241 cgcgactttc gatgaaatga tcctgccgat ttatgctccg gcagagttta ttccggtaaa
     9301 aggtcagggc agccgaatct gggatcagca aggcaaggag tatgtcgatt tcgcgggtgg
     9361 cattgcagtt acggcgttgg gccattgcca tcctgcgctg gtgaacgcgt taaaaaccca
     9421 gggcgaaact ctgtggcata tcagtaacgt tttcaccaat gaaccggcgc tgcgtcttgg
     9481 gcgcaaactg attgaggcga cgtttgccga acgcgtggtg tttatgaact ccggcacgga
     9541 agctaacgaa accgccttta aactggcacg ccattacgcc tgtgtgcgtc atagcccgtt
     9601 caaaaccaaa attattgcct tccataacgc ttttcatggt cgctcgctgt ttaccgtttc
     9661 ggtgggtggg cagccaaaat attccgacgg ctttgggccg aaaccggcag acatcatcca
     9721 cgttcccttt aacgatctcc atgcagtgaa agcggtgatg gatgatcaca cctgtgcggt
     9781 ggtggttgag ccgatccagg gcgagggcgg tgtgacggca tcgacgccag agtttttgca
     9841 gggcttgcgc gagctgtgcg atcaacatca ggcattattg gtgtttgatg aagtgcagtg
     9901 cgggatgggg cggactggcg atttgtttgc ttacatgtac tacggtgtga cgccggatat
     9961 tctgacttct gcgaaagcgt taggcggcgg cttcccgatt agcgccatgc tgaccacggc
    10021 ggaaattgct tctgcgtttc atcctggttc tcacggttcc acctacggcg gtaatcctct
    10081 ggcctgtgca gtagcgggcg cggcgtttga tatcatcaat acccctgaag tgctggaagg
    10141 cattcaggcg aaacgccagc gttttgttga ccatttgcag aagatcgatc agcagtacga
    10201 tgtgtttagc gatattcgcg gtatggggct gttaattggc gcggagctga aaccacacta
    10261 caaaggtcgg gcgcgtgatt tcctgtatgc gggtgcagag gttggcgtaa tggtgctgaa
    10321 tgccggaccg gatgtgatgc gtttagcacc gtcgctggtg gtggaagatg cggatatcga
    10381 tgaagggatg caacgtttcg cccacgcggt ggcgaaggtg gttggggcgt aaataagacg
    10441 catcaggcaa aatatgtcgg atgcggcgtg aatgccttat ccgatggttt agcctgtatt
    10501 acgccttcga atcccgcaac ttgcgactca gccaaatccc gtgatgcggt cgctgacgcc
    10561 atgccatcga cgaaatggtg tgcatggtgt tcagatgacc aataacccgc tgtaaatgct
    10621 gctccagcgt acctgccgcg ccttcgtgcg gctgcatctc cggcgcatcc atgatattgg
    10681 catcgccaga actacccggt tcgtcatact ccagtcgctg ctgacaacgc tgaatggcga
    10741 tttcacaaga ctgtaaatac tcttgtgcca gttcaggtgg caatgcccgg tgttcccgcg
    10801 ccagcgtggt catggcatta atatgctcaa caataaactg gctgtgcgtt acccacagtt
    10861 tcatatctgc cagataatgg ctgttaaacg ccggttcctg catcgcctga ttcaatgagt
    10921 tatacagagt gttatgtgcc tgatttaccc gcattcgctg ccaggccagt ggcgtaggtt
    10981 gcggatcctc gctaagaatc aagcgaatcg cttcctgata ggcttctaaa gcgtcatggg
    11041 cgtttttacg caataacccg ctctgccact gcggccacag ccagacagta ccgccgaaag
    11101 caattaaaca accaataatg gtatcgataa gacgcggaag gatgtattgc tcgccgttca
    11161 accacaatag ttgcagggta tacactgcgg taatagtaaa accgaccgtc gcccagccgt
    11221 agtttttgcg caatatcagg tagctggcga gggtggtaat cagcatcaac gtcagggtgt
    11281 aaccttcggg aattttaaag tgcagcgcca cgcccgcaat gattaacccg accacggttc
    11341 ccacggagcg attcacaatc ctcagacggg ttgcgccata gccattttgt gtcaccagca
    11401 ataccgtcat caggatccag tacgacttcg gcagatgcag cgcggtgccc atcaggctgg
    11461 caacgcttaa catcacactg agtcgtccgg cattgcgtag cgccggagac tttagtgaca
    11521 gataactttt cagcgccgga agtaatggca ttcgccgctg tttatcggcc agtaagtcac
    11581 gggcatagag cggtttttgg gtgcgcagca cgcgggcgat gcggctgaaa tgccagtagc
    11641 agaattgccc aaccggatta tccggatgct ggcgggcgat tttttccagt gcgccaattt
    11701 gcttttccat cgtaaaacgc gttggcaggc gatggtaaag aatgtcatca gccagcacgc
    11761 gcaggcgagc ggcgacggtt tgcgcattcc agcggataac ttcttccgca tggctacgct
    11821 cgaccagctt ttgcacctct tccggctgat gcaaactgac cgaaatatgt tcctgtaaat
    11881 ccagcgcctc ctggaaaata cgcagcatcc gcttgtagtc agtattattt tgcgcggaaa
    11941 gcatatgcat ttgctgatag cactgggtaa ttagatcgac cgctttttgc tggcgcacca
    12001 gcagcggcgg cagcgctttt tcagggtcgg tgtgctgggt aagcaggctg tatttggctt
    12061 cacaataatc tgccagttca cggtacagca gacttagtga ctcgcgcagc ggttgttcgc
    12121 gccagatcca gaaccaaaac cagttaaaca atccgtacca gagagtgccc aacgcataga
    12181 tgagcaacgg ttcccagacc ggcatgtatc ccgccagact gagggtaaaa atggctgcca
    12241 gcagcgatgc gggaagcaat tttgcgtgca atggccccaa ctcagcagtg acgccaagta
    12301 ccagcgttaa tccggtcagc aaaaagggca ggggaacatc ttttgccagt agcagctgtg
    12361 tcagtaagct acaggtggca aacagcgacg caccaatgat taagcgtttg aaaaaacgtt
    12421 tatgaggcgt atcaaggccc gcaatattgc aacaggcagg aacgagagag aagagcagac
    12481 cgaatcgtaa ttcgccaagc attaacccaa cggccacggg caaacatagc accagcgttt
    12541 gtcgaagtgc atagttgata tcggggtgat aaatcagtct gcgccacatc gggggaaaca
    12601 aaatggcgcg ctaccaggta acgcgccact ccgacgggat taacgagtgc cgtaaacgac
    12661 gatggtttta ccgtgtgcgg agatcaggtt ctgatcttca agcatcttca gaatgcgtcc
    12721 cacggtttca cgagaacagc cgacaatctg accgatttcc tgacgggtaa ttttgatttg
    12781 cataccgtcc gggtgagtca tagcgtctgg ttgttttgcc agattcagca gagtctgtgc
    12841 aatgcggccc gtcacgtcga ggaacgccag gttgcccact ttctctgaag tgacttgcag
    12901 acgacgcgcc atctgtgcag acagacgcat cagaatgtcc gggtttacct gaatcaattg
    12961 gcgaaatttt ttgtacgaaa tttcagccac ttcacaggcg gttttcgcac gtacccatgc
    13021 gctacgttcc tggccctctt caaacaggcc cagttcgcca ataaaatcac cctgattcag
    13081 ataggagagg atcatttctt taccctcttc gtctttgatc agcactgcca cagagccttt
    13141 aacgatgtag tacagcgttt ccgctttttc accctggtga ataagcgtgc tcttggatgg
    13201 gtacttatga atgtggcaat gagacaagaa ccattcgaga gtcgggtctg tttgcggttt
    13261 gccaagcacc atgcgcggtt atcctctgtt ataagctttc tccagagcca gataacgccg
    13321 ctgtctctgg attgccgaaa tatgcttccc gctacctggg aaggggctat caactgtact
    13381 gcacggtaat gtgacgtcct ttgcatacat gcagtacatc aatgtattac tgtagcatcc
    13441 tgactgtttt agcatagctt tcgctttgtg tctcctggtg tctcgcttca gcatgaccca
    13501 ggtcgccttc cgttgcgcga tttggttagt acg
//
LOCUS       DADMHC010000105        13500 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.105, whole genome shotgun sequence.
ACCESSION   DADMHC010000105 DADMHC010000000
VERSION     DADMHC010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13500)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13500)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13500
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.105"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..467)
                     /gene="dsbG"
                     /locus_tag="JNZ57_002514"
     CDS             complement(<1..467)
                     /gene="dsbG"
                     /locus_tag="JNZ57_002514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706462.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbG"
                     /protein_id="HAY8828704.1"
                     /translation="MTVIGYAFYSTFALTEKDKLMLKKILLLALLPAIAFAEELPAPV
                     KAIEKQGITIIKTFDAPGGMKGYLGKYQDMGVTIYLTPDGKHAISGYMYNEKGENLSN
                     TLIEKEIYAPAGREMWQRMEQSHWLLDGKKDAPVIVYVFADPFCPYCKQFWQQA"
     gene            779..1342
                     /gene="ahpC"
                     /locus_tag="JNZ57_002515"
     CDS             779..1342
                     /gene="ahpC"
                     /locus_tag="JNZ57_002515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003858764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit C"
                     /protein_id="HAY8828705.1"
                     /translation="MSLINTKIKPFKNQAFKNGEFIEITEKDTEGRWSVFFFYPADFT
                     FVCPTELGDVADHYEELQKLGVDVYAVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTG
                     ALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAS
                     HPGEVCPAKWKEGEATLAPSLDLVGKI"
     gene            1513..3078
                     /gene="ahpF"
                     /locus_tag="JNZ57_002516"
     CDS             1513..3078
                     /gene="ahpF"
                     /locus_tag="JNZ57_002516"
                     /EC_number="1.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415139.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit F"
                     /protein_id="HAY8828706.1"
                     /translation="MLDTNMKTQLKAYLEKLTKPVELIATLDDSAKSAEIKELLAEIA
                     ELSDKVTFKEDNSLPVRKPSFLITNPGSNQGPRFAGSPLGHEFTSLVLALLWTGGHPS
                     KEAQSLLEQIRHIDGDFEFETYYSLSCHNCPDVVQALNLMSVLNPRIKHTAIDGGTFQ
                     NEITDRNVMGVPAVFVNGKEFGQGRMTLTEIVAKIDTGAEKRAAEELNKRDAYDVLIV
                     GSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVH
                     VDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGE
                     DQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA
                     DQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIG
                     LLPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKAS
                     LSAFDYLIRTKTA"
     gene            complement(3187..3615)
                     /gene="uspG"
                     /locus_tag="JNZ57_002517"
     CDS             complement(3187..3615)
                     /gene="uspG"
                     /locus_tag="JNZ57_002517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspG"
                     /protein_id="HAY8828707.1"
                     /translation="MYKTIIMPVDVFEMELSDKAVRHAEFLTQDDGVIHLLHVLPGSA
                     SLSLHRFAADVRRFEEHLQHEAEERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAE
                     ELGADVVVIGSRNPSISTHLLGSNASSVIRHANLPVLVVR"
     gene            3836..5074
                     /locus_tag="JNZ57_002518"
                     /pseudo
     CDS             3836..5074
                     /locus_tag="JNZ57_002518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308674.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent formaldehyde
                     dehydrogenase"
     gene            complement(5305..5715)
                     /gene="rnk"
                     /locus_tag="JNZ57_002519"
     CDS             complement(5305..5715)
                     /gene="rnk"
                     /locus_tag="JNZ57_002519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside diphosphate kinase regulator"
                     /protein_id="HAY8828708.1"
                     /translation="MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMC
                     SPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLR
                     VGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL"
     gene            complement(5945..6751)
                     /gene="rna"
                     /locus_tag="JNZ57_002520"
     CDS             complement(5945..6751)
                     /gene="rna"
                     /locus_tag="JNZ57_002520"
                     /EC_number="4.6.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease I"
                     /protein_id="HAY8828709.1"
                     /translation="MKAFWRNAALLAVSLLPFSSANAVALQTKQYGDFDRYVLALSWQ
                     TGFCQSQHDRNRNERDECRLQTETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFG
                     CATRPIPNLPEAHASRMCSSPETGLSLETAAKLSEVMPGAGGRSCLERYEYAKHGACF
                     GFDPDAYFGTMVRLNQEIKESEAGKFLADNYGKTVSRRDFDAAFAKSWGKENVKAVKL
                     TCQGNPAYLTEIQISIKADAINAPLSANSFLPQPHPGNCGKTFVIDKVGY"
     gene            complement(6862..8325)
                     /gene="citT"
                     /locus_tag="JNZ57_002521"
                     /pseudo
     CDS             complement(6862..8325)
                     /gene="citT"
                     /locus_tag="JNZ57_002521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308678.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/succinate antiporter CitT"
     gene            complement(8376..9254)
                     /gene="citG"
                     /locus_tag="JNZ57_002522"
     CDS             complement(8376..9254)
                     /gene="citG"
                     /locus_tag="JNZ57_002522"
                     /EC_number="2.4.2.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triphosphoribosyl-dephospho-CoA synthase CitG"
                     /protein_id="HAY8828710.1"
                     /translation="MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDR
                     INCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDM
                     FRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQSLTPTTVCSTAASFCRGLTDRELRTN
                     NSQLTAGQRLYQQLALTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLL
                     LMAINGDTNVASRGGEGGLRWLQREAQTLLQKGGIRTLADLDYLRQFDRECIERNLSP
                     GGSADLLILTWFLAQI"
     gene            complement(9229..9780)
                     /gene="citX"
                     /locus_tag="JNZ57_002523"
     CDS             complement(9229..9780)
                     /gene="citX"
                     /locus_tag="JNZ57_002523"
                     /EC_number="2.7.7.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase holo-[acyl-carrier protein]
                     synthase"
                     /protein_id="HAY8828711.1"
                     /translation="MHLLPELASHHAVSIPELLVSRDERQARQHVWLKRHPVPLVSFT
                     VVAPGPIKDSEVTRRIFNHGVTALRALAAKQGWQIQEQAALVSASGPEGMLSIAAPAR
                     DLKLATIELEHSHPLGRLWDIDVLTPEGEILSRRDYSLPPRRCLLCEQSAAVCARGKT
                     HQLTDLLNRMEALLNDVDACNVN"
     gene            complement(9784..11316)
                     /gene="citF"
                     /locus_tag="JNZ57_002524"
     CDS             complement(9784..11316)
                     /gene="citF"
                     /locus_tag="JNZ57_002524"
                     /EC_number="2.8.3.10"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase subunit alpha"
                     /protein_id="HAY8828712.1"
                     /translation="MTQKIEQSQRQERVAAWNRRAECDLAAFQNSPKQTYQAEKARDR
                     KLCANLEEAIHRSGLQDGMTVSFHHAFRGGDLTVNMVMGVIAKMGFKNLTLASSSLSD
                     CHAPLVEHIRQGVVTRIYTSGLRGPLAEETSRGLLAEPVQIHSHGGRVHLVQSGELNI
                     DVAFLGVPSCDEFGNANGYTGKACCGSLGYAMVDADNAKQVVMLTEELLPYPHNPASI
                     EQDQVDLIVKVDRVGDAAKIGAGATRMTTNPRELLIARSAADVIVNSGYFKEGFSMQT
                     GTGGASLAVTRFLEDKMRSRDIRADFALGGITATMVDLHEKGLIRKLLDVQSFDSHAA
                     QSLARNPNHIEISANQYANWGSKGASVDRLYVVVLSALEIDTQFNVNVLTGSDGVLRG
                     ASGGHCDTAIASALSIIVAPLVRGRIPTLVDNVLTCITPGSSVDILVTDHGIAVNPAR
                     PELAERLPEAGIKVVSIEWLRERARLLTGEPQPIEFTDRVVAVVRYRDGSVIDVVHQV
                     KE"
     gene            complement(11327..12235)
                     /gene="citE"
                     /locus_tag="JNZ57_002525"
     CDS             complement(11327..12235)
                     /gene="citE"
                     /locus_tag="JNZ57_002525"
                     /EC_number="4.1.3.34"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (pro-3S)-lyase subunit beta"
                     /protein_id="HAY8828713.1"
                     /translation="MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLE
                     DSVALREKDTARRMVYHALQHPLYRDIETIVRVNALDSEWGVNDLEAVVRGGADVVRL
                     PKTDTAQDVLDIEKEILRIEKACGREPGSTGLLAAIESPLGITRAVEIAHASERLIGI
                     ALGAEDYVRNLRTERSPEGTELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEA
                     AHIKQLGFDGKSLINPRQIDLLHNLYAPTQKEVDHARRVVEAAEAAAREGLGVVSLNG
                     KMVDGPVIDRARLVLSRAELSGIREE"
     gene            complement(12232..12528)
                     /gene="citD"
                     /locus_tag="JNZ57_002526"
     CDS             complement(12232..12528)
                     /gene="citD"
                     /locus_tag="JNZ57_002526"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase acyl carrier protein"
                     /protein_id="HAY8828714.1"
                     /translation="MKINQPAVAGTLESGDVMIRIAPLDTQDIDLQINSSVEKQFGDA
                     IRTTILDVLAHYNVRGVQLNVDDKGTLDCILRARLEALLARASGIPTLPWEDCQ"
     gene            complement(12543..>13500)
                     /gene="citC"
                     /locus_tag="JNZ57_002527"
     CDS             complement(12543..>13500)
                     /gene="citC"
                     /locus_tag="JNZ57_002527"
                     /EC_number="6.2.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415151.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="[citrate (pro-3S)-lyase] ligase"
                     /protein_id="HAY8828715.1"
                     /translation="TVEVFITVTRDEKLIACGGIAGNIIKCVAISESVRGEGLALTLA
                     TELINLAYERHSTHLFIYTKTEYEALFRQCGFSTLTSVPGVMVLMENSATRLKRYAES
                     LKKFRHPGNKIGCIVMNANPFTNGHRYLIQQAAAQCDWLHLFLVKEDSSRFPYEDRLD
                     LVLKGTADIPRLTVHRGSEYIISRATFPCYFIKEQSVINHCYTEIDLKIFRQYLAPAL
                     GVTHRFVGTEPFCRVTAQYNQDMRYWLKTPTISAPPIELVEIERLRYQEMPISASRVR
                     QLLAKNDLTAIAPLVPAVTLHYLQNLLEHSRQDAAARQKPPA"
BASE COUNT         3340 a         3406 c         3607 g         3147 t
ORIGIN      
        1 gcctgctgcc agaactgttt acaatatggg cagaacggat cggcgaagac gtagacaatg
       61 accggcgcat cttttttacc gtcgaggagc cagtgggatt gttccatccg ttgccacatt
      121 tcgcgtccgg ctggtgcgta aatttctttt tcgataagtg tgttactcag gttttcacct
      181 ttctcgttgt acatgtaacc agagatagcg tgcttaccat ctggagtcag gtagatggtg
      241 acgcccatat cctgatactt tccgagataa cctttcattc ctccgggggc atcgaacgtt
      301 ttgatgattg taatgccctg tttttcaatc gcttttactg gagcaggaag ttcctctgcg
      361 aaggcgattg caggaagcag agccagtaaa agtatctttt ttaacattaa tttgtccttt
      421 tcagtcagtg caaaagtcga gtaaaaggca taacctatca ctgtcatagg taagagctta
      481 gatcaggtga ttgccctttg tttatgaggg tgttgtaatc catgtcgttg ttgcatttgt
      541 aagggcaaca cctcagcctg caggcaggcg ctgaagatac caaagggtag ttcagattac
      601 acggtcacct ggaaaggggg ccattttact ttttatcgcc gctggcggtg caaagttcac
      661 aaagttgtct tacgaaggtt gtaaggtaaa acttatcgat ttgataatgg aaacgcatta
      721 gccgaatcgg caaaaattgg ttaccttaca tctcatcgaa aacacggagg aagtatagat
      781 gtccttgatt aacaccaaaa ttaaaccttt taaaaaccag gcattcaaaa acggcgaatt
      841 catcgaaatc accgaaaaag ataccgaagg ccgctggagc gtcttcttct tctacccggc
      901 tgactttact ttcgtatgcc cgaccgaact gggtgacgtt gctgaccact acgaagaact
      961 gcagaaactg ggcgtagacg tatacgcagt atctaccgat actcacttca cccacaaagc
     1021 atggcacagc agctctgaaa ccatcgctaa aatcaaatat gcgatgatcg gcgacccgac
     1081 tggcgccctg acccgtaact tcgacaacat gcgtgaagat gaaggtctgg ctgaccgtgc
     1141 gaccttcgtt gttgacccgc agggtatcat ccaggcaatc gaagttaccg ctgaaggcat
     1201 tggccgtgac gcgtctgacc tgctgcgtaa aatcaaagca gcacagtacg tagcttctca
     1261 cccaggtgaa gtttgcccgg ctaaatggaa agaaggtgaa gcaactctgg ctccgtctct
     1321 ggacctggtt ggtaaaatct aaatttcctt cgtctttcgc gctaccaact ccggcgcgaa
     1381 atacttcgga aattcaccta attcttcggg tgctgcggca cccgattttc ttccccgcac
     1441 tatgatgcaa gctgcatcca ggtagccgta gaggccgctt gcatgatgat gtttaaagcc
     1501 caggagataa acatgctcga cacaaatatg aaaactcaac tcaaggctta ccttgagaaa
     1561 ttgaccaagc ctgttgagtt aattgccacg ctggatgaca gcgctaaatc ggcagaaatc
     1621 aaggaactgt tggctgaaat cgcagaactg tcagacaaag tcacctttaa agaagataac
     1681 agcttgccgg tgcgtaagcc gtctttcctg atcaccaacc caggttccaa ccaggggcca
     1741 cgttttgcag gctccccgct gggccacgag ttcacctcgc tggtactggc gttgctgtgg
     1801 accggtggtc atccgtcgaa agaagcgcag tctctgctgg agcagattcg ccatattgac
     1861 ggtgattttg aattcgaaac ctattactcg ctctcttgcc ataactgccc ggacgtggtg
     1921 caggcgctga acctgatgag cgtactgaac ccgcgcatca agcacactgc aattgacggc
     1981 ggcaccttcc agaacgaaat caccgatcgc aacgtgatgg gcgttccggc agtgttcgta
     2041 aacgggaaag agtttggtca gggccgcatg acgttgactg aaatcgttgc caaaattgat
     2101 acgggcgcgg aaaaacgtgc ggcagaagag ctgaacaagc gtgatgctta tgacgtatta
     2161 atcgtcggtt ccggcccggc gggtgcagcg gcagcaattt actccgcacg taaaggcatc
     2221 cgtaccggtc tgatgggcga acgttttggt ggtcagatcc tcgataccgt tgatatcgaa
     2281 aactacattt ctgtaccgaa gactgaaggg cagaagctgg caggcgcact gaaagttcac
     2341 gttgatgaat acgacgttga tgtgatcgac agccagagcg ccagcaaact gatcccagca
     2401 gcagttgaag gtggtctgca tcagattgaa acagcttctg gcgcggtact gaaagcacgc
     2461 agcattatcg tggcgaccgg tgcaaaatgg cgcaacatga acgttccggg cgaagatcag
     2521 tatcgcacca aaggcgtgac ctactgcccg cactgcgacg gcccgctgtt taaaggtaaa
     2581 cgcgtagcgg ttatcggcgg cggtaactcc ggcgtggaag cggcaattga cctggcgggt
     2641 atcgttgagc acgtaacgct gctggaattt gcgccagaaa tgaaagccga ccaggttctg
     2701 caggacaaac tgcgcagcct gaaaaacgtc gacattattc tgaatgcgca aaccacggaa
     2761 gtgaaaggcg acggcagcaa agtcgttggt ctggaatatc gagatcgtgt cagcggcgat
     2821 attcacaaca tcgaactggc cggtattttc gtgcagattg gtctgctgcc gaacaccaac
     2881 tggctcgaag gcgcagtcga acgtaaccgc atgggtgaga ttatcattga tgcgaaatgc
     2941 gaaaccaacg tcaaaggcgt attcgcagcg ggtgactgta cgacggttcc gtacaagcag
     3001 atcatcatcg ccactggcga aggtgccaaa gcctctctga gtgcttttga ctacctgatt
     3061 cgcaccaaaa ctgcataaga agaagtaaga ttcacctgca attgcttagc cgccggggtc
     3121 aaacctagcg gcttttttat ggcattaaaa agccctgccg ggatgttcta ggcagggcgg
     3181 cataaattag cgaacgacca gtacaggcag attggcgtgg cggatcacgc tcgaggcgtt
     3241 agaacctaac agatgggtcg aaatcgatgg gttgcgagaa ccgataacta caacatcagc
     3301 ccccagttct tctgccaact cattgacttc atcccgcacg ctaccaaaac ggacatgttg
     3361 tttaatgcgg gaaggatcga tggtgaagtg gctgaccatc gtttgcagac gttcttctgc
     3421 ttcatgttgc agatgctctt caaaacgacg cacatcagcg gcaaaacggt gcaggctcag
     3481 gctggctgac ccgggtagta cgtgaagtag atgaataact ccgtcatcct gggtgaggaa
     3541 ttcagcgtgg cgaacagctt tgtcgctcaa ttccatttca aatacatcaa ctggcataat
     3601 gattgtctta tacataaccc tttctccctg ttaatcatga aaaaatcatt cgccatgatt
     3661 ataatattta tccctgatat ttgtctggtt ctttttcctt acgaacggtt tctgtgatta
     3721 atatattctc actgaacact aggaattctc ccaaaacctg cggtaccgcc cgttttcccg
     3781 ctgtgatagc tacccttaaa gactgactct tttttgaact gtctctggag gttgcatgaa
     3841 agcattgact tatcacggcc cacatcacgt tcaggtagaa aatgttcccg atccgggcat
     3901 tgaacaggca gatgatatta ttctgcgtat tacggcaacg gcgatctgtg gctctgatct
     3961 ccatctttat cgaggcaaaa taccctaggt taaacatggc gatatttttg gtcatgaatt
     4021 tatgggggaa gtcgttgaaa ccggaaagga cgtaaaaaat ttgcaaaaag gcgaccgggt
     4081 ggtaattccg tttgtcattg cttgtggcga ctgttttttc tgtcgaatgc agcaatatgc
     4141 cgcctgcgaa aataccaatg cgggtaaagg cgctgcgctc aataaaaaac agataccagc
     4201 tcccgcggca ttgtttggtt atagtcacct gtatggtggc gttcctggtg gacaggcgga
     4261 atatgtccgc gtccctaaag ggaatgtggg gccgtttaaa gtaccgcctt tgctttcaga
     4321 tgataaagcc cttttccttt ctgatattct gccaacggca tggcaggcag caaaaaatgc
     4381 gcagatccaa caaggttcaa gcgttgcagt ctatggtgcc ggtccagtgg gattgttgac
     4441 aatcgcctgt gcacggttgc tcggtgcgga acagattttt gttgttgatc atcatcccta
     4501 ccgcttgagt ttcgccgctg accgctacgg cgcgatcccg attaatttcg atgaagatag
     4561 cgatccggca cagtcaatta ttgaacaaac ggcaggtcac cggggcgtgg atgcagtaat
     4621 agacgccgtc ggttttgaag cgaaaggcag caccacggaa acggtgctga ctaacctgaa
     4681 actggagggc agcagcggta aagcgttgcg ccagtgtatt gcggcggtca ggcgtggcgg
     4741 cattgttagc gtaccgggcg tctacgctgg atttattcac ggtttcctgt ttggtgacgc
     4801 ctttgataaa gggttgacgt ttaaaatggg acagacccac gttcacgcat ggctgggaga
     4861 attattaccg ttaattgaga aaggattact gaaaccagaa gaaattgtta cccactatat
     4921 gccgtttgaa gaggccgccc ggggatatga gattttcgaa aaacgtgaag aggagtgccg
     4981 taaggtgatt ctggtacccg gtgcacaaag cgcagaggcg gcgcagaagg cagtttcagg
     5041 tctggtgaat gcgatgccgg ggggaacaat atgatcgtca ggagtggttt tcgaggtaaa
     5101 ggacagccat gacgataatc gccgccataa tcagaaatcc tatcaggatg taaaatgctt
     5161 ctgccatggt tattcccaca aacgaaacgg aataattttg cagcaaaagt gaacagtgag
     5221 aaccaggaaa aattgctgat tttgcgtaaa gaggatgcga gtgcatcctc tgggcaaagc
     5281 gagttatcgc ttgtgcagat gggattaaag caggtagtcg ccagcagctt ctggctggta
     5341 ttcgagttcc agcacttcaa ggtgggttgc aacgccgccc ggaagttccc agtgaatgga
     5401 atcgccaacg cgcagcccca gcagtgcggc acctaccgga gccataacgg aaagctgagt
     5461 attgctatcg gtcatttttg ccggatacac cagcgtgcgc acacgcactt cgccatcgct
     5521 aagattgcgg aatttaaccc ggctgttcat tgtcaccacg tcgtgtggca tctcttctgg
     5581 cgaacacatt tgggcgcgat ccaactctgc gtttaacgcg tcggcgattg gcaaaccagc
     5641 ataggcgggt tgctccagca gaatatcgat gcgttcggca tccaggtcgt taatgatgat
     5701 agttggtctg gacattttta ctccatgtcg tcggtactgc gagtgtcgca gataaacata
     5761 cccaaaagaa aaccctcacc gtcaggcggc gagggtttaa ctcacatgat gatactgact
     5821 gttgctcact ctttgaagtg atttgcgtca cattcaggga attcctcaat gcagcgcatt
     5881 atgtataatt cttaatcgtc acggtttatg gaagacgaat tagcgtgttt tgtaaatcag
     5941 atgattaata acccacttta tcaatcacaa aggttttgcc acagttgcct gggtgtggtt
     6001 gtggcaagaa tgagtttgca gaaagcggag cgttgatggc gtcagctttg atcgagatct
     6061 gaatttcagt caaatacgca gggttaccct ggcacgttag cttaactgct ttcacgttct
     6121 cttttcccca gcttttggca aaggcggcgt caaagtcacg gcggctcact gttttaccgt
     6181 aattatccgc aaggaatttt ccggcttcgc tctctttaat ttcttgattc aggcgtacca
     6241 tcgtaccgaa gtatgcgtcc ggatcaaaac caaagcaggc accgtgtttg gcatattcgt
     6301 agcgttccag gcaggaacgt ccgccagctc ctggcatgac ttcacttagt ttagcggccg
     6361 tttccagtga taacccggtt tccggcgatg aacacatccg gctggcgtgc gcttctggta
     6421 gattcgggat tgggcgagta gcgcaaccga agcgcatcca gcggcgttca tcaacaccac
     6481 gggcagcaac cgatttaggc aatcctggcc acagaccatg tacggtcaga aaatcagctt
     6541 tgttggtcgt ttcggtttgc aggcgacatt catctcgttc gttacgattt cgatcgtgtt
     6601 gactctggca aaatccggtt tgccaggaga gggccaggac atagcgatca aaatcgccat
     6661 actgttttgt ctgcaacgct acggcgttgg cagaagagaa gggaagcaga gaaaccgcga
     6721 gcaacgcggc gttacgccag aatgctttca taatgggtgt ggaactcata catacactga
     6781 atactatcta ttaaatcatc acgcccgcca ggtgggctta cctggcgggc gtgatgattt
     6841 attcagcgtt tggcgaacgt attagttcca catggcgaga atcggccagc caaccaacag
     6901 caacatagag atgtaaatca ccccgaagat tgcgccaaga cgccagtaat cttttgattt
     6961 cacatagcca cagccgtaaa taatcacccc aggaccggtt gcatagggcg tcagacagcc
     7021 catgataccg atagacagca ccagcaggat acacagttgt tccattggta cgcccggaat
     7081 acctttaccg acggccagaa taaccggcag catggttgcg gtgtgcgcag acaggctggc
     7141 aaacaggtag tgtgcaaagt agaacaccag aaccagtaca atcaccgttg cgtttggtga
     7201 gaatccttcc aggtgcgtac tcatggtacc ggcgaaccag tcaataaagc cagaacgagt
     7261 caggccgtta gccatcacaa ccagagttgc caggttgacc agcgtgttcc atgcgctgtt
     7321 atagcgggta atatctttcc aaggcacaac gtgcagggcc agcattagcg aaactgccag
     7381 cagaccaact gcagtagcat taatgacttc actgccaaaa acccacaaac ctaagctgag
     7441 caatacaagg ccaatcagtg tccactctct gcgtgtcagc gcacccatgg ttttcagttc
     7501 atcacccgcc taggttgcca cttcttcact gtgtgtgatt tccggtttgt acagcacgta
     7561 ggaaagccac ggcgcaatga taagcaagat aaccccaacc ggcaggaagc agaggaacca
     7621 ctgcaaccag ctaatctgga taccggcaat tttgctgacg aactccagac ccagcacgtt
     7681 tggtgccgca ccggtgacaa acatggacga actcagactg gtactaatga ccatcatcca
     7741 catcaaatag ccgccaatat gacgcgcgga cggatcgttg gggaatgatt taaacaacgg
     7801 cggcaggttt ttaatgaccg gaaaaaccgt acccccggta cgcgcggtgt tggacggtgt
     7861 aaacggcgcc agcagaatgt cgataatgac aatcgcataa cccaacgtca gcgtgcgttt
     7921 gcccatgaat ttcaccagga aaagggcaat gcgaagacct aacccggaaa cttcataccc
     7981 taatgcaaaa ataaatgcgc caaataccag ccataccgtg gtgctggaaa aaccagccag
     8041 accccatttc agcgcctgtt tttgcgcatt aaacgctggg tcagctaatt ctttggcatc
     8101 aaagagcagg taattactgc caataatgca aatagtaacc gcaataaaac tgatcgctgt
     8161 tgccggaatt ggctcgagga tcatgccgac aatcattgcc acaaacacag cgaagtaatg
     8221 ccatgcctgt ggtggcatac cgtcggggac agggataaga aacatgacac ccatcaccac
     8281 cagtggggcc aatagtttcc atatattatc ttttgctaaa gacatacggg ttctccgaaa
     8341 attaatattt ccaaatttat caagtgctta aataattaaa tctgtgctaa aaaccaggta
     8401 aggatcagca ggtcggcact gccgcctgga ctgagatttc gttcgataca ctccctgtcg
     8461 aactgccgga gataatcgag atcggcgagg gttcgaatgc cccctttttg caataatgtt
     8521 tgcgcctcgc gctgtagcca gcgcaggccc ccctcgccac cgcgcgaagc aacgttggta
     8581 tcgccgttga tcgccatcag taggagcaag gtatcgagca atgccagttc aggatctaac
     8641 ccctgatcca gcagagtgag gtaatgcggc aaggcgtggt tgatcaccag tggataaccc
     8701 gcttcggctt caccgcgtgc gccggtaagg gcaagctgct ggtacaaccg ttgacctgcc
     8761 gtcagttgtg aattattggt acgcagttcg cgatcggtca ggccacggca gaaacttgcc
     8821 gccgtagaac aaacggttgt tggcgttagc gactggttga gctgaagcaa acggccaatt
     8881 gccgcacaca gtagccctaa agaaaaaatg ctgcccttat gcgtgtttac tcccgcggtg
     8941 gcgcggaaca tatcaccttc gcaagccata ccaattgggc gtaatccgtg gagtaccgct
     9001 tctggtgcca tttccgcact acaggcacca aattcaatga aacggggtag ccagccctga
     9061 atcgccagcg cgctgcggtg gaaatcttcc agcgccatat ctttatgcgc accgcagtta
     9121 atgcgatcca cgagacctgg tttcggtgac agattgactt cagtcagcat ggcgcgccag
     9181 cccagcaggg cgtactcatc gattaatgac gtcgcaagct ttgtggtttt agttgacgtt
     9241 gcaggcatcg acatcgttca gcagtgcctc catgcggttg agtaaatcgg tcagttgatg
     9301 ggtttttcca cgcgcgcaga cggctgcgct ttgctcgcac aacaggcagc ggcgaggcgg
     9361 cagtgaatag tcgcggcggg agagaatttc gccttcgggc gtcaggacat cgatatccca
     9421 taaccgcccg agaggatgac tatgttcaag ctcaatggtg gcgagcttga ggtcgcgagc
     9481 cggggcggca atgctcaaca taccctccgg tccgctggcg gaaaccagtg cagcctgctc
     9541 ctgaatttgc cagccctgtt ttgcggctaa ggcacgcaag gctgtcacgc catgattaaa
     9601 aattcggcgt gtgacctcac tgtctttaat cggcccaggc gcaaccacgg taaaggagac
     9661 cagtggaaca ggatggcgct tgagccagac gtgttgccgt gcttgccttt catcccggct
     9721 gacgagcagc tcgggaattg acaccgcatg gtggctggcg agttcaggaa gcaggtgcat
     9781 ggcttattcc ttcacctgat gtacaacatc gatcaccgag ccatcgcggt aacgcacaac
     9841 ggcaacgact cggtcggtga attcaatcgg ctgtggttca ccggtcagca gacgcgcacg
     9901 ttcacgcagc cactcaatgg aaaccacttt aatgcccgct tccggcagac gttctgccag
     9961 ctccggacgt gccgggttaa ctgcgatacc gtggtctgtg accagaatat cgacactgga
    10021 gcccggggtg atgcaggtca gcacgttatc caccagagtc ggaatacgac cgcgtaccag
    10081 cggcgcgacg atgatggaaa gcgcagaggc aatcgcggta tcgcagtgac caccggaagc
    10141 accacgcagt acgccgtcag agccggtcag cacgttaacg ttgaactggg tgtcaatttc
    10201 cagcgcgctc agtaccacca cgtagagacg atcaaccgat gcgcctttcg aaccccagtt
    10261 agcgtactgg ttggcgctga tttcgatgtg attggggtta cgggccagcg attgcgcagc
    10321 atggctgtca aagctctgca catccagcag tttgcggatc agaccttttt cgtgcagatc
    10381 aaccatcgtt gcagtaatac cgccgagggc gaagtcggcg cgaatatcgc ggctacgcat
    10441 tttgtcttcc aggaaacggg ttaccgccag cgaagcgccg ccggtgccgg tttgcatgga
    10501 gaaaccttct ttgaagtagc cagagttgac aatcacatcc gcagcgctac gggcaataag
    10561 cagttcgcgc gggttagtgg tcatacgggt cgcaccagcg ccgatttttg cagcatcgcc
    10621 aacgcgatca actttgacga tcaaatcaac ctgatcttgc tcaatgcttg ccggattatg
    10681 cggataaggc agcagttctt cggtaagcat cacgacctgt tttgcgttgt cggcatcaac
    10741 cattgcatag ccgagggagc cacagcaggc tttaccggtg taaccgttgg cattaccgaa
    10801 ttcatcacag gatgggacgc cgaggaaagc cacgtcgata ttcagttcgc cgctctgtac
    10861 cagatgcaca cgtccgccgt gagagtggat ttgcaccggt tccgccagca gaccacggga
    10921 ggtttcttcc gccagtggac cgcgcaggcc agaggtataa atgcgggtaa ccacgccctg
    10981 gcgaatgtgt tctaccagcg gcgcatggca atcactcagg gagctggagg ccagagtcag
    11041 gtttttaaag cccatcttcg cgatgacgcc catcaccata ttgacggtca ggtcaccgcc
    11101 acggaaagcg tgatggaagg aaaccgtcat gccgtcctgt aaaccagagc gatgaatcgc
    11161 ttcttccagg ttggcgcaca gtttgcgatc gcgcgctttt tcagcctggt aggtttgctt
    11221 tggtgagttc tggaaagcgg caagatcgca ttcagcgcga cgattccagg ccgctacccg
    11281 ttcttgtcgt tgagattgtt caattttctg cgtcattttg attgccttat tcttcgcgga
    11341 tgccggaaag ttctgcacgg gagagcacca gacgggcgcg atcgataacc ggaccgtcca
    11401 ccatcttgcc gttcagggaa accacgccga ggccttcgcg agcggcggct tcagcggctt
    11461 ctacgacgcg gcgggcgtga tccacttctt tctgggtcgg tgcgtagagg ttgtgcagca
    11521 gatcaatctg acgcgggttg atcagcgatt tgccgtcaaa gcccagctgt ttgatgtggg
    11581 cggcttcttg caggaatccg gcttcgttgt tagcgtcgga atagacggta tcgaacgcct
    11641 gaatacccgc agagcgcgcg gcctgcaaaa tggaacagcg tgcgaacagc agttcagttc
    11701 cttccgggga gcgttctgta cgcaggttgc gcacatagtc ttctgcacct agggcgatac
    11761 cgatcaaacg ctcggaagcg tgagcgattt ccactgcgcg ggtaatgccc agcggagatt
    11821 caatcgccgc cagcaggccg gtgctgccgg gttcacgacc acaggctttt tcgatacgca
    11881 ggatctcttt ttcaatatcc agaacatcct gagcggtatc ggttttcggc agacgcacaa
    11941 cgtccgcacc accgcgaacg acggcttcca ggtcgttaac accccattcg gaatccagcg
    12001 cgttgacacg cacaatggtt tcaatatcgc gatacagcgg atgttgcagc gcgtgataaa
    12061 ccatgcggcg ggcggtgtct ttttcacgta atgccacgga gtcttcgagg tcaaacatca
    12121 gggcatcagc cgggtagatg aaggagttgc tgaccatcgc ggcattggca ccaggcacaa
    12181 acaacatgct gcggcgggtg cgagttttac gttgttgcag cgaagcggaa atcattggca
    12241 atcctcccat ggcagagtcg ggataccgct ggcgcgtgcc agcagggctt ccagtcgtgc
    12301 acgtaaaatg cagtccagtg tgcctttgtc atcgacattc agctgtacgc cgcgcacgtt
    12361 gtagtgggcg agaacgtcca gaatggtggt gcgaattgca tcgccaaact gtttctcaac
    12421 gctgctgttg atttgcaggt cgatatcctg cgtatcgagt ggggcgatgc gtatcatcac
    12481 atccccagac tcaagggtgc ctgcaacggc gggctggttt attttcattt ttcacctgtt
    12541 tctcatgcgg ggggcttttg acgagctgcc gcgtcctggc gggagtgctc aagcaggttc
    12601 tgcaaataat gcagcgtgac tgcagggacc agcggcgcga tagccgtgag atcgtttttc
    12661 gccagcagtt gacgtacccg ggaagcggat atcggcatct cctggtaacg cagccgctca
    12721 atttcaacca gttcgatggg cggtgcggag atagtcggcg ttttcagcca gtagcgcata
    12781 tcctggttgt actgggcggt aacgcgacaa aagggttcag taccgacaaa gcggtgagtt
    12841 acacccagtg cgggagcgag gtactgacgg aaaatcttca gatcaatttc ggtgtaacaa
    12901 tggttaatga cgctctgttc tttaatgaag tagcaaggga acgtagcgcg ggagatgatg
    12961 tattcggagc cgcgatgcac agtcaggcgt ggaatatcgg cggtgccttt taacaccaga
    13021 tccagccggt cttcataggg gaagcgtgaa gaatcttctt tgactaaaaa cagatgcaac
    13081 cagtcgcact gtgccgcagc ttgttgaatc agataacggt gaccattcgt aaagggattg
    13141 gcgttcatca caatgcagcc aatcttgttc cctggatgac gaaatttttt cagcgattcg
    13201 gcatagcgtt tcagtcgcgt ggcgctgttt tccatcagca ccatcacgcc gggtacgctg
    13261 gtcagcgtgg aaaaaccgca ctggcggaac agcgcctcgt attcggtttt ggtataaata
    13321 aacagatgcg tgctgtgccg ctcataggcg aggtttatca gttcagtggc taatgtcagc
    13381 gccagtcctt caccgcgaac ggattcactg atagcaacgc atttaataat atttccggca
    13441 attccaccgc acgcgataag cttttcatcg cgggttacgg taataaatac ttcgactgtg
//
LOCUS       DADMHC010000106        13481 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.106, whole genome shotgun sequence.
ACCESSION   DADMHC010000106 DADMHC010000000
VERSION     DADMHC010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13481)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13481)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13481
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.106"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(102..3323)
                     /gene="carB"
                     /locus_tag="JNZ57_002528"
     CDS             complement(102..3323)
                     /gene="carB"
                     /locus_tag="JNZ57_002528"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HAY8828716.1"
                     /translation="MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRV
                     ILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALEL
                     ERQGVLEEFGVTMIGATVDAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAA
                     DVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEM
                     EVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIG
                     VETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDE
                     LMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGAHDRLTTQMKSVGEVMAIGRTQQ
                     ESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVD
                     GVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGV
                     REAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLG
                     GGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLE
                     DVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAV
                     ERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQT
                     AVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPA
                     YTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKA
                     TGVPLAKVAARVMAGKSLAELGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRST
                     GEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELD
                     ATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIR
                     RSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK"
     gene            complement(3341..4489)
                     /locus_tag="JNZ57_002529"
     CDS             complement(3341..4489)
                     /locus_tag="JNZ57_002529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase small subunit"
                     /protein_id="HAY8828717.1"
                     /translation="MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILT
                     DPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYL
                     KRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAK
                     EVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTI
                     VPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLA
                     LASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFD
                     GTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK"
     gene            complement(4945..5766)
                     /gene="dapB"
                     /locus_tag="JNZ57_002530"
     CDS             complement(4945..5766)
                     /gene="dapB"
                     /locus_tag="JNZ57_002530"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HAY8828718.1"
                     /translation="MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL
                     LGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIG
                     TTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHH
                     RHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSRESHTGERVPGTIGFATVRAGDIVG
                     EHTAMFADIGERLEITHKASSRMTFANGAVRSAFWLSGKESGLFDMRDVLDLNSL"
     gene            complement(5933..6847)
                     /gene="rihC"
                     /locus_tag="JNZ57_002531"
     CDS             complement(5933..6847)
                     /gene="rihC"
                     /locus_tag="JNZ57_002531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside hydrolase RihC"
                     /protein_id="HAY8828719.1"
                     /translation="MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEK
                     TTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIP
                     AFLAIRDALMRAPEPVTLVAIGPLTNIALLLSQCPECKPYIRRLVIMGGSAGRGNCTP
                     NAEFNIAADPEAAACVFRSGIEIVMCGLDVTNQAILTPDYLATLPELNRTGKMLHALF
                     SHYRSGSMQSGLRMHDLCAIALLVRPELFTLKPCFVAVETQGEFTSGTTVVDIDGCLG
                     KPANVKVALDLDVKGFQQWVAEVLALAS"
     gene            complement(6913..7863)
                     /gene="ispH"
                     /locus_tag="JNZ57_002532"
                     /gene_synonym="lytB"
     CDS             complement(6913..7863)
                     /gene="ispH"
                     /locus_tag="JNZ57_002532"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HAY8828720.1"
                     /translation="MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRY
                     VVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKV
                     HMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEK
                     LSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVL
                     VVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQ
                     NVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD"
     gene            complement(7865..8314)
                     /gene="fkpB"
                     /locus_tag="JNZ57_002533"
     CDS             complement(7865..8314)
                     /gene="fkpB"
                     /locus_tag="JNZ57_002533"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HAY8828721.1"
                     /translation="MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASL
                     SEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFT
                     AMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA"
     gene            complement(8383..8877)
                     /gene="lspA"
                     /locus_tag="JNZ57_002534"
     CDS             complement(8383..8877)
                     /gene="lspA"
                     /locus_tag="JNZ57_002534"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HAY8828722.1"
                     /translation="MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFP
                     SLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYA
                     LIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSR
                     AKKQ"
     gene            complement(8877..11693)
                     /gene="ileS"
                     /locus_tag="JNZ57_002535"
     CDS             complement(8877..11693)
                     /gene="ileS"
                     /locus_tag="JNZ57_002535"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HAY8828723.1"
                     /translation="MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAA
                     KKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPI
                     ELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFK
                     TEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVD
                     QDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKD
                     LVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHT
                     APGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGA
                     LLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQA
                     RIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAW
                     WDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQH
                     RGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADI
                     LRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMV
                     VLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKA
                     DSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGL
                     ADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELAAKLTALG
                     DELRFVLLTSGATVADYHDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKV
                     AEHAEICGRCVSNVAGDGEKRKFA"
     gene            complement(11736..12677)
                     /gene="ribF"
                     /locus_tag="JNZ57_002536"
     CDS             complement(11736..12677)
                     /gene="ribF"
                     /locus_tag="JNZ57_002536"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HAY8828724.1"
                     /translation="MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGR
                     KRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAAL
                     TAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEG
                     GVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQV
                     SPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVL
                     RKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA"
     gene            complement(12685..12903)
                     /locus_tag="JNZ57_002537"
     CDS             complement(12685..12903)
                     /locus_tag="JNZ57_002537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2575 domain-containing protein"
                     /protein_id="HAY8828725.1"
                     /translation="MCRHSLRSDGAGFYQLAGCEYSFSAIKIAAGGHFLPVICAMAMK
                     SHFFLISVLNRRLTLTAVQGILGRFSLF"
     gene            13006..13269
                     /gene="rpsT"
                     /locus_tag="JNZ57_002538"
     CDS             13006..13269
                     /gene="rpsT"
                     /locus_tag="JNZ57_002538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006117633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HAY8828726.1"
                     /translation="MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDK
                     AAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA"
BASE COUNT         3152 a         3806 c         3399 g         3124 t
ORIGIN      
        1 aaaagattta cttaatgggc aaaaaaaacg gtcctcatca gagaaccgta ttacttattc
       61 gatcaaatta gcggatgaaa aatatccgcc atgacacgct attatttgat ctgcgcgtgc
      121 atttcctgca ccgaaattac tttttcggtc gcgtcggcat tcagcgccat cgcggtagcg
      181 aaaccaccgt tcagggtggt gtcataatgc actttatatt gcagcgcact gcgacggatc
      241 acgcgggagt cttcaatcgc gcgacggcct gaagtggtgt tgatgatgta ggtatattcg
      301 ccattcttga tgcggtcctg aatgtgcgga cggccttcat gcaccttgtt caccagacgc
      361 ggattaatgc ccgcttcgcc cagcacaatc gccgtgccgt gggtcgcatc cagctcgaag
      421 ccctgtttca gcagttttgc cgccaggtcc accacgcgtt ctttatcgcc ttcgcgcacg
      481 gaaagcaacg cacgaccgtg tttcttcatg gtggagttgc tgcccagctg cgctttggca
      541 aacgcttcag cgaaggtgcg gcccacgccc atcacttccc cggtggagcg catttctggc
      601 cctaacagcg ggtcaacacc cgggaattta ttgaacggca gcaccacttc tttcaccgag
      661 tagtacggcg ggataacttc tttggttacg cccagctcag ccagcgattt gccagccatc
      721 acacgcgccg ccacttttgc cagcggtacg ccggtggctt tggagacgaa cggaacggta
      781 cgcgccgcac gcgggttaac ttcaatcagg tagacttcgt tgtttttcac cgcaaactgc
      841 acgttcatca gaccgcgcac ctgcaattcg aaggccagtt tctgcacctg ctggcgcatc
      901 acatcctgaa tttcctgact taaggtgtag gctggcagag aacatgcgga gtcaccggag
      961 tgcacgcccg cctgctcgat gtgctccatg atgccgccaa tcagcaccat ttcgccgtcg
     1021 cagatggcat ccacgtcaac ttctaccgcg tcatcaagga agtgatccag caacactggc
     1081 gcatcgttag acacgctgac cgccgtctgg aagtagcgac gcaggtcagc ttcgtcatag
     1141 acgatttcca tcgcccgacc gccgagaacg taagacggac gtaccaccag cgggtagcca
     1201 atctctttcg ccttctctac cgccatttca atagcggtaa cggtggcgtt cgccggttgt
     1261 ttcagtttca gacgctcaac cgcatgctgg aagcgttcac ggtcttctgc acggtcgata
     1321 gcatccgggc tggtgccgat aaccggtacg ccagcagctt ccagcgcgcg cgccagtttc
     1381 agcggggtct gaccgccgta ctgaacgata acgcctttcg gcttctcaat acgcacgatt
     1441 tccagcacat cttccagagt taccggctcg aagtagaggc gatcggaagt gtcgtagtcg
     1501 gtggagacgg tttccgggtt acagttaacc ataatggttt cgtaaccgtc ttcgcgcagc
     1561 gccagcgagg cgtgtacaca gcagtagtcg aattcgatac cctgaccgat acggttcggg
     1621 ccgccgccga gaaccatgat tttttcacgg tcggtagacg gattcgcttc gcactcttct
     1681 tcataagtgg agtacatgta agcggtgtcg gtggcgaact ctgccgcaca ggtatccacg
     1741 cgcttataaa ccgggtgcag gtcatactgg tcgcgcagct tgcggatttc cgcttcgcgc
     1801 acgcccgcca gttttgccag acgcgcatcg gcaaagcctt tgcgtttcag ctggcgcagg
     1861 aattcagcgt tcaggccagt gatgcccact tccgctactt tctcttccag acgcaccagt
     1921 tcttcaatct gtaccaggaa ccagcggtca atattggtca ggttgaacac gccgtccaca
     1981 gacaggcccg cacggaaggc atcggcgatg taccagatac gctctgcgcc agcatctttc
     2041 agttcgcgac ggattttggt taacgcttcc gggtcatcga ggctcacttt cgggtcgaat
     2101 ccagtcgcac cgacttccag gccgcgcagc gctttttgca gggattcctg ctgcgtgcga
     2161 ccaatcgcca tcacttcgcc aaccgatttc atctgagtgg tcagacggtc gtgagcacca
     2221 gcgaattttt cgaagttgaa gcgaggaatt ttagtaacca catagtcgat ggacggctcg
     2281 aaggaggccg gagtacgtcc gccagtgatg tcgttcatca gttcgtcgag ggtgtaaccc
     2341 accgccagtt tcgccgccac tttagcaatc gggaaaccgg tcgctttcga cgccagcgcc
     2401 gaagaacggg acacgcgtgg gttcatttcg ataacaatca ggcgaccgtt tttcgggttc
     2461 accgcaaact ggacattgga accaccggtt tcaacgccga tttcacgcag caccgccatc
     2521 gaggcgttac gcatgatttg atattctttg tcggtcagcg tttgggctgg cgcgacagtg
     2581 atggagtcac cggtatggat gcccatcgca tcaaagtttt cgatagagca gacgatgatg
     2641 cagttgtcat ttttatcacg caccacttcc atctcgtact ctttccagcc gatcagcgac
     2701 tcatcaatca gcagctcttt ggttggggag agatccagac cgcgggcgca aatttcttca
     2761 aactcttcgc ggttataagc gataccgccg ccgctaccgc ccatggtaaa ggatgggcga
     2821 ataatgcacg ggaagcccac gtcagcggca accgccagcg cttcttccat cgtgtgtgcg
     2881 ataccggaac gcgcggtttc cagaccaatt ttcttcatcg ctacgtcgaa acgacggcgg
     2941 tcttctgctt tatcaatcgc atcgacggtc gcaccaatca tagtcacgcc gaactcttcc
     3001 aacacgccct gacgctccag ctccagcgcg cagttcagcg ccgtctgacc gcccatcgtt
     3061 ggcagcaccg cgtccgggcg ctctttttca ataatcttgc gtactacttc ccagtgaatc
     3121 ggctcgatgt aggtcgcatc ggccatttcc gggtcggtca tgatggtcgc cgggttggag
     3181 ttcaccagaa tgacgcggta accctcttcg cgcagggctt tacatgcttg cgcgccagag
     3241 tagtcaaact cacacgcctg accgataaca atcgggcccg cacccagaat caggatactt
     3301 tttatatctg tacgttttgg catggctctt ttactcctga ttacttagcg gttttacggt
     3361 actgctcaat taactcgata aagtggtcga acaacggcgc tgcgtcgtgt ggcccagggc
     3421 tggcttccgg gtgaccctgg aagctgaaag ccggtttatc agtgcgatga atgccctgta
     3481 acgtaccgtc gaacagggat ttatgcgtga cacgcaggtt tgcaggtaat gttgcttcat
     3541 ccaccgcaaa accgtggttc tgggcggtga tcatcaccac gtttttctcc acatctttaa
     3601 ccggatggtt gccgccgtgg tgaccaaatt tcattttgac agtcttcgca ccgctcgcca
     3661 gcgccagcag ctgatgaccg aggcagatgc cgaataccgg aatatcggtt tcgaggaatt
     3721 tctggatggc ggtaatggcg taatcgcacg gggccgggtc gccaggaccg ttggagagga
     3781 agatgccgtc tggattcatt ttcagcacat cttccgcaga agtttgcgcc ggaacgatgg
     3841 tcaggcgaca gcctctatcc accagcatcc gcaggatgtt gcgcttggca ccaaaatcat
     3901 aagccacgac gtggaacggc agctcgtctt cttttttcgc ttctggcagg ccgccggtca
     3961 acgtccagct cccttgtgtc cagctatagg cttctgcggt ggtcacttct tttgccagat
     4021 ccatgccatt cagaccaggg aacgcgcggg ctttttctaa cgccaacgcc gcatccgggt
     4081 tatcgcctgc gataatgcag ccattctgtg cgcctttctc gcgcagtaaa cgcgtcagct
     4141 tacgggtatc gatatcggca atcgccacga tgttatggcg cttcaggtaa gaagagaggt
     4201 cttcggtatt acggaagttg ctggcaatca gcggcaggtc gcgaatcacc agaccttgtg
     4261 catgtacctg agaagattct tcatcggcgt cattagtgcc gacattgcca atatggggat
     4321 aagtaagagt aacgatttga cgagaatagg aaggatcagt gaggatttct tgataaccgg
     4381 tcattgaagt attgaaaacg acttccccaa ccgccgaacc tgttgcccct atggcccgac
     4441 cgtgaaactg ggttccgtct tccagaacca atagcgctga cttaatcaaa acaccctcca
     4501 gagaatattc actcacttta tttgcatatt aattcacaat gatgacgtaa atcaatgcaa
     4561 atctgcttac cgacgaattt ctggcaaacg gcggcattct ggagatatgg gcgctaaaag
     4621 tcaacttaat ggcgggattt tttatattat tttgtggctc atgcatgttt tactggcatt
     4681 aagcgacaaa aagatcatat aacctgttct ggaaaacgct tgcgcagcaa gaagattgca
     4741 tgaaataaaa gcgagcaggg aaaagtggac caaatggtca aattttacat taaaacaaca
     4801 aaaacagaag acaaaacatg taatttttgg cacttatata caatttaaaa acataacact
     4861 aaaaataaaa gggccaaaaa ttaaagccct ttataatcaa taaattaaat gtgttatttt
     4921 tgcaccataa caaatatttt gtggttacaa actattgaga tcaagcacat ctcgcatatc
     4981 aaaaagacca ctttccttac cactcaacca aaaagccgat cttaccgcgc cgttagcaaa
     5041 tgtcatgcgg ctggacgcct tatgggtgat ctccagacgc tcgccaatat cggcaaacat
     5101 cgcggtatgt tcgccaacga tgtcacctgc acgcacggtg gcaaaaccaa tggtgccagg
     5161 cacacgttca ccggtgtggc tttcacgact gtagaccgcg caatctttca gatctttatc
     5221 aagggcgtgg gcgatcgcct ctcccattgc cagtgcggtg cctgacggcg catcaacttt
     5281 atgtctatga tgtgcttcaa taatttcgat atcggtgtag tcacccatca ctttggctgc
     5341 tttctccagc agcttaagca tgacgttaac gccaacgcta aaattggcgg caaagacaat
     5401 cgcaatatcg gcggcggcgt cacgaatcgc ctgtttaccg gcttcgtcaa accccgtagt
     5461 gccgatcacc atccctttgc catgctggcg acaaaaagcg agatggttca gcgtaccttc
     5521 cggacgggta aaatcgataa acacatcaaa atcatctttt accgcatcga ggctgctttg
     5581 cacggtaacg cctgttttcc ctgcaccagc cagctcaccg gcgtcgctgc ccagtaaaga
     5641 agatccttcg cgctccagcg ccgcgcccag ctgcacgcct tctaatgcca gcgccgcctg
     5701 aatcaactgg cggcccatac gccccccggc tcccgcgatg gcaacgcgga tgtttgcatc
     5761 atgcatagct attctctttt gttaatttgc atagaccgtt ttcagagtaa ccagcgcatc
     5821 gctacgccgc cagccaaaaa cgctgataat tagaaattaa tgataaacag ggagggatat
     5881 cagtgaaagg catgagtcga tgaatgactg catgccgata acatgtgaca ggttacgacg
     5941 ccagagccag cacctcagcc acccactgct ggaagccttt cacatccaga tccaatgcca
     6001 cctttacatt ggctggtttg cccaggcaac cgtcgatatc aaccaccgtc gtgcctgagg
     6061 taaattcgcc ctgagtttcc actgccacaa aacacggttt gagagtgaac aattccgggc
     6121 gcaccagcaa ggcaatagcg caaagatcgt gcatacgcag tccactttgc atactgccgc
     6181 tacggtagtg gctaaacagg gcgtggagca tttttccggt gcgattcaac tccggcaaag
     6241 tagcgagata gtcaggggtt aatattgcct gattggtgac atccagaccg cacatgacga
     6301 tttcgatgcc gctacggaag acacaggcag ccgcttctgg atcggcagcg atattaaact
     6361 cggcgtttgg tgtgcagttg ccgcgaccag cagaaccgcc catgatcacc agacgacgaa
     6421 tatacggttt acattccggg cattgtgaaa gtaacagcgc aatattggtt aacgggccga
     6481 tggccaccag ggtaacgggc tctggtgcac gcatcagggc atcccgaatc gccagaaacg
     6541 ctggtatccc gagcggcttt cggttgtgct caacaaagtc gtagccagcc attcccgatt
     6601 cgccgtgcac agatgccgca tcacgcggtg cgcgtaccag cggcacagcg gctccctggg
     6661 cgagcggaat ctccgcattc cagaaatgca gcagttgcag ggcgttgcgg gtggttttct
     6721 caaccgagac attacccgcg acggtggtca tcagttgcag gtcgagttcg ggtgcaaaaa
     6781 tcgcggcggc aatggcgacg gcatcgtcaa tgccggggtc agtatcgagg aagataggta
     6841 aacgcatgtt ttctccataa aaaatgccgg taacaagacc ggcattttcg cataacttag
     6901 gctgctaatg acttaatcga cttcacgaat atcgacacgc agctctttcg gcacttcgaa
     6961 aacaatgttt tcttcacggc cttccagcgg aatggcttca ccaccgccca gctgctgcaa
     7021 acgtgccacc acattctgca ccagaatatc cggagccgat gcgcccgcag tcacgccgac
     7081 gcatttaacc tctttcaccc actcttcctg gatgtctttc gcatcgtcaa tcaaaaacgc
     7141 gcgtttgccc atacgctggg ccagctccgc cagacggttg gagttggagg agtttttcga
     7201 accgaccacc aacacaactt ccgcctgttc tgccagggcg cgtaccgctt cctgacggtt
     7261 agtcgtggcg tagcagatgt catctttgcg cggaccgaca attttcggga agcgtttacg
     7321 cagcgcgtcg atcacatcag acgtgtcatc caccgacagc gtggtctggg tcataaagga
     7381 gagcttctct tcgtttttga ccgtcagttt ccacacatcg tccggcgatt cgaccagata
     7441 cattccccct tccgggttac tgtactggcc cattgtccct tccacttccg ggtgcccggc
     7501 gtgaccgatg agaatagatt cttcgccacg gcgactggcg cgggcgactt ccatatgcac
     7561 tttggtcacc agcggacagg tcgcgtcaaa taccgtcaaa tcgcgacttt ttgcttcgtt
     7621 acgtaccgcc tgagaaacac cgtgtgcgga gaaaatcagg atcgcgccgt ccggtacttc
     7681 gctaatctgc tcaataaaga tagccccacg ctcacgcaag ctatcgacca catagcggtt
     7741 atgtaccact tcgtgacgga catatatcgg tgcgccgtaa atggccagcg cgttttcaac
     7801 aatgctgata gcgcggtcta ccccggcaca aaaaccacgc gggttggcca acaggatctg
     7861 catgttacgc ctccaatgcc ggatcgattt ccagcacttc aatatcaaaa tgaacggtct
     7921 gcccggccag cggatggttg aaatcaacgg taatggagtc gccgttaatt tcgcggatca
     7981 cgccaggcat ctcactgcca tccattgcgg taaaaagcat gattgcgcca atttctggct
     8041 cgcctgcatc cataaattca cggcgggaga agtactgaat caggtccggt gacggcacgc
     8101 caaacgccgc atctggctcc aacgagaagg tggttttatc gcccactttc agccccaaca
     8161 ggtgttgctc cagcccttca gaaagagaag catcacccag gcggaacagc gccggtttac
     8221 cgttgttgcg ggtagactcg gcggtggtgc catcgtcgag ttttagcgtg aagtgcacca
     8281 ggacggcgct attgctctgt acagattcag acatgcaggt ttgctcttat atttgaggat
     8341 ttttgccgga tgcggcgtaa acgccttatc cggcagggtt tattattgtt ttttcgctct
     8401 agaaggcaaa aaaccttcca gcacaatcag tgccgcaccg acacagatgg cagtatcggc
     8461 aaggttgaag gtggcgaagt gccagtcgcc gacgtagaag tcgatcatat cgacaacgaa
     8521 gccgtgccac aggcggtcga acaggttgcc cagcgcgccg ccaataatca gcgcgtaagc
     8581 gatattgttt agcttctgcg tggccttcga gcgatacatc atcactgcca ggatcacgct
     8641 aataccaatc gcaataccgg caaagaacca acgctgccag ccgccgctat cggcaaggaa
     8701 actaaacgcc gcgccatagt tacgcgcata atgcagatta agcgacggga acagcgggac
     8761 cgtatccccc agagcaaagt tctggaggat caggtatttg ctgcccagat cgataatcag
     8821 cacgactacc accagccaca gccagcgtag ccctgttgaa cagatcgatt gactcatcag
     8881 gcaaacttac gtttttcacc gtcaccggcg acgttgctga cacagcggcc gcagatttct
     8941 gcgtgttccg ccaccttgcc gacatcctgg gtgtagtgcc agcagcgtgg gcacttctca
     9001 ccttcggctt tactcaacgc gactttcagc cctttgagta cttcgctctg ctgagcatca
     9061 gcaggtgcgt cgtgatagtc tgcaacggta gcgccggagg tcaacaggac aaatcgtaat
     9121 tcatcgccca gcgcggtcag tttcgccgcc agttccggtt ctgcatacaa ggttactgcc
     9181 gcttccagcg agccacccac tttcttgtcg gcacgcgctt gctcaatgac tttgttcact
     9241 tcgccacgca ctttcaacag ctcgtcccag aacgcatcgt tcatcgcttc gctgtctgcc
     9301 aggccaaaca ggccttcgta ccactcaccg gtgaagacgt atttttcacg ttcgcccggc
     9361 aggtagcccc acacttcatc agcggtgaag gagaggattg gtgccatcca gcgcaccagc
     9421 gcttctgcga tgtgatacag cgcagtctgg cagctacgac gcgccacact gtccgctttg
     9481 gcggtgtact gacggtcttt gatgatgtcg aggtagaagg aacccatctc aacggagcag
     9541 aagcgcatca gacgctgtac cacttcgtgg aaatcgtatg cttcgtacgc cttgaggatg
     9601 tcttcctgtg ccgctttcgc acaacctacg gcccagcgat ccagtaccac catctcttcc
     9661 ggtttcacca tatcttttgc tggatcaaaa ccgttcaggt ttgccagcag gaagcgcgcg
     9721 gtgttacgga tacgacgata gctatcggca gcacgtttca ggatctcgtc agaaacggcc
     9781 atttcaccgg tgtagtcggt tgatgccacc cacagacgca gaatatccgc gcccagtttg
     9841 ttcatcacat cctgcggcga aacggtattg ccgatggatt tagacatctt gcggccctga
     9901 ccatccacgg taaagccgtg ggtcagtacc tgacgatacg gcgctttgcc tttcatcgcg
     9961 gtggagatca ttagggaaga catgaaccaa ccacggtgct ggtcagaacc ttccagatac
    10021 atgtccgctg catgaccggc aaattccgga cgcacgtcaa caacagaaga gtgggtagat
    10081 ccggagtcaa accatacatc caatgtgtcc ggcactttca cgtactgatc agcttcatcg
    10141 ccgaggatct ctttcgcatc aagatcccac cacgcctgga tgccgtcaac ttcaacgcgt
    10201 tttgccactt cttccattag ttcgagagta cgcggatgca gctcttccgt gtctttgtgc
    10261 acgaacagtg acatcggtac gccccaggtg cgctgacggg agatacacca gtcaggacgg
    10321 ttagcaacca tcgactcgat acgcgcctgg ccccagtccg ggatccactg cacgcctttg
    10381 atctctttca gtgactgcgc acgcagacct ttctgatcca tgctgacgaa ccactgcggc
    10441 gtcgcgcgga agatgatcgg cgttttgtga cgccagcagc acggatagct gtgctgcatt
    10501 ttctcaacgt gcagcagcgc gcctttttcc tgcagcagcg caacgacgat gtcgttcgct
    10561 ttgaagacgt tcacgccatc cagcgtcgga taagtgcccg gcagataagt gccgtccggg
    10621 ccaaccgggt tagcggtttc caggccgtat ttctgaccga tcacatagtc gtccgggccg
    10681 tggccaggcg cggtgtgaac ggcaccggta ccggcatcca gggtaacgtg atcgccgagg
    10741 attgccggaa cgtcgaagcc cataaacgga tgggtaaagc gcagcaactc aagctccgca
    10801 ccttttaccg tgccgagaat ggtgtaatcg gtcacgccga tacgctgcat tacgctttca
    10861 accagatctt tcgccagaat cacggcctga ccgtcgatct gcaccagcgc atagtcgaaa
    10921 tcaggtgcaa tagagattgc gcggttcgca ggcagagtcc acggcgtagt ggtccagatc
    10981 accagcgaga ttgggccgtt aacgttgctt acggcaaatt ttgctttcag tgcatcctga
    11041 tcgaccgcct gaaaagcaac gtcgatggac ggagaagttt tgtcgtaata ctcaacttcc
    11101 gcttccgcca gcgcagaacg gcagtcaacg caccagtgta ccggcttcgc gcctttgtgc
    11161 aggtgaccgt tgccgatgat tttgcccagc gcgcggatga tgttggcttc agttttgaag
    11221 tccatggtca ggtacgggtg cgaccagtcg cccagcacgc ccagacggat aaagtctttg
    11281 cgttgaccgt caacctgggt cgccgcgtat tcgcggcact tggcgcggaa ctcggcggcg
    11341 gtgaatttct cacccggctt accgtattct tgctctactt tcagctcgat cggcagaccg
    11401 tggcagtccc agccaggcac atacggcgag tcataaccgg aaagcccttt ggacttcacg
    11461 ataatgtctt tcagaatctt gttaaccgag tgaccaatat gaatgctgcc attcgcataa
    11521 ggagggccat catgcagaat gaaggttttt ttgccttttt tagccgcacg gatgatgccg
    11581 tacagatcat catcagtcca acgcgccagc attcccggtt cgcgcttggc gagatcgcca
    11641 cgcatcggga accctgtttc cggcaaattc agggttgatt tatagtcact catcagattc
    11701 tcggttccgt gtttcggttt gattacataa caggcttaag ccggttttgt tagcccaaaa
    11761 aattcgcggg cggttaattc atcacgcgca atctgcgctt tcagttcgtc cagcgacgca
    11821 aatcgctgct cattgcgtat ttttttacgc agcactactt gtatatggcg accgtaaagg
    11881 tccattgcaa catctaacaa atgcacttcc agctgctggc gaataccggc aaccgttggg
    11941 cgtgttccga tgtttgccac gccgggtaac ggcttttcac cgaggcccag cacttctacc
    12001 gcataaaccc ctttcaccgg ggaaacctga cggcgtagcg gtacattcgc cgtcgggaaa
    12061 cctatagtgc gccctaattc atcaccgtgg actacacgcc cggagatggc aaacgggtgc
    12121 cccagtaaac tttctgccag agccagattg tcatccgcca gcgcctgacg cacagcggtg
    12181 ctgctaatac gcacgccacc ttcgcaaaaa gtttgcgtac tagtgatatc gaagccgtat
    12241 tccatgccag ctttctgtaa taacaagaaa tcgccttcac gaccagcgcc aaagcggaaa
    12301 tcatccccta cggcaagaaa ttttacgcgc aaatgcttca ccagaagatc gctgatgaaa
    12361 ttttgcgcgg ttaacgccgc gaaacgcctg tcgaaacgca cgcacagcac gtaatcaacg
    12421 ccacactctg caaggtaacg cagtttttcc cgcagccggg tcagtcttgc cggggcttta
    12481 tcggtagcaa acagttccag tggttgaggt tcaaaaagca tcaccatcac cggtaagttg
    12541 cgcttgcgcc cttcttcctg caagccctgt aacagcgcgc gatgaccgcg atgcacgccg
    12601 tcgaaattac caatagtcag cacacaccct tcttgcgggg cctggctgag attatgtatg
    12661 ccgcgtatca gcttcatgtc tggctcaaaa cagtgaaaat cgtccgagta taccttgtac
    12721 agcggtcaag gttaaccggc gattgagtac cgaaatcaga aagaagtggc ttttcattgc
    12781 catggcgcaa atcacgggaa gaaagtgacc gcctgctgca atttttatcg cggaaaagct
    12841 gtattcacac cccgcaagct ggtagaatcc tgcgccatca ctacgtaacg agtgccggca
    12901 cattaacggc gcttatttgc acaaatccat tgacaaaaga aggctaaaag ggcatattcc
    12961 tcggcctttg aattgtccat atagaacaca tttgggagtt ggaccttggc taatatcaaa
    13021 tcagctaaga agcgcgccat tcagtctgaa aaggctcgta agcacaacgc aagccgtcgc
    13081 tctatgatgc gtactttcat caagaaagta tacgcagcta tcgaagctgg cgacaaagct
    13141 gctgcacaga aagcatttaa cgaaatgcaa ccgatcgtgg accgtcaggc tgctaaaggt
    13201 ctgatccaca aaaacaaagc tgcacgtcat aaggctaacc tgactgcaca gatcaacaaa
    13261 ctggcttaat cgccaatttg ctgaagcttt gtgaaaaagc ccgcgcaagc gggttttttt
    13321 atgcctgctg cttttatgat gcgtgagaga acacactacc ggttgccaga tagtcaaaag
    13381 atgctggctt ttgcagacat gccgttacac tttctgaact cttcgtggct taagaatcgt
    13441 aaaaccatcg gctgatacat tctgaacaag aatatctact c
//
LOCUS       DADMHC010000107        13465 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.107, whole genome shotgun sequence.
ACCESSION   DADMHC010000107 DADMHC010000000
VERSION     DADMHC010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13465
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.107"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..148
                     /locus_tag="JNZ57_002539"
     CDS             <1..148
                     /locus_tag="JNZ57_002539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HAY8828727.1"
                     /translation="TATPDIDLAPTSSEQTLNFFAWMEQIDQATPVTPGAVTANATYV
                     LDYK"
     gene            199..2658
                     /locus_tag="JNZ57_002540"
     CDS             199..2658
                     /locus_tag="JNZ57_002540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706516.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HAY8828728.1"
                     /translation="MDTVNIYRLSFVSCLVVAMPCALAVEFNLNVLDKSMRDRIDISL
                     LKEKGVIAPGEYFVSVAVNNNQISNGQKINWHKNDDKTIPCINDLLVDKFGLKPEVRQ
                     SLPLINQCVDFSSRPEMLFNFDQANQQLNISIPQAWLAWHSENWTPPSTWKEGVAGVL
                     MDYNLFASSYRPQDGSSSTNLNAYGTAGINTGAWRLRSDYQLNQTDSDDNHEQSGEIS
                     RTYLFRPLPQLGSKLTLGETDFSSNIFDGFSYTGAALASDDRMLPWELRGYAPQISGI
                     AQTNATVTISQSGRVIYQKKVLPGPFIIDDLNQSVQGTLDVKVTEEDGRVNNFQVSAA
                     STPFLTRQGQVRYKLAAGQPRPSMSHQTENETFFSNEVSWGMLSNTSLYGGLLLSGDD
                     YHSAAMGIGQNMLWLGALSFDVTWASSHFDTQQDERGLSYRFNYSKQVDATNSTISLA
                     AYRFSDRHFHSYANYLDHKYNDSDAQDEKQTISLSVGQPITPLNLNLYANLLHQTWWN
                     ADASTTANITAGFNVDIGDWRDISISTSFNTTHYEDKDHDNQIYLSISLPFGNGGRVG
                     YDMQNSSHSTTHRMSWNDTLDERNSWGMSAGLQSDRPDNGAQVSGNYQHLSSAGEWDI
                     SGTYAANDYSSVSSSWSGSFTATQYGAAFHRHSSTNEPRLMVSTDGVADIPVQGNLDY
                     TNHFGIAVVPLISSYQPSTVAVNMNDLPDGVTVAENVIKETWIEGAIGYKSLASRSGK
                     DVNVIIRNASGQFPPLGADIRQDDSGISVGMVGEEGHAWLSGVAENQKFTVVWGDNQH
                     CSLHLPEHMEDTANRLILPCH"
     gene            2673..3404
                     /locus_tag="JNZ57_002541"
     CDS             2673..3404
                     /locus_tag="JNZ57_002541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706517.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HAY8828729.1"
                     /translation="MTFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDN
                     RSDKLPYLAYSWLENEKGEKSDDLLVALPPIQRLEPKATTQVRIVKQASTTKLPGDRE
                     TLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKVELQLQVSQQG
                     NQLTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTVNTNTGNYSGSQFYLGYMD
                     DYGALRMTTLNCSGQCHLQAVEAKK"
     gene            3401..4461
                     /locus_tag="JNZ57_002542"
                     /pseudo
     CDS             3401..4461
                     /locus_tag="JNZ57_002542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415244.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
     gene            4568..5659
                     /locus_tag="JNZ57_002543"
     CDS             4568..5659
                     /locus_tag="JNZ57_002543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706518.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HAY8828730.1"
                     /translation="MLYRYTKEKIMRERRMPVLQWGMLCVLSLILSIGFLAVHLPAAL
                     LLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAANWPIVLAI
                     LLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYL
                     RVLFVAGAAVLVTCMMLGDNAEAVNQQIVWFPPVSINLLLTILLAVVAGTAGCMLRLP
                     SGTMLIRMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQ
                     ILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPDGLDTVAVIAAGSNADMALIMA
                     MQTLRLFSILLTGPAIARFISTYAPKRSA"
     gene            complement(5656..6447)
                     /gene="nei"
                     /locus_tag="JNZ57_002544"
     CDS             complement(5656..6447)
                     /gene="nei"
                     /locus_tag="JNZ57_002544"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease VIII"
                     /protein_id="HAY8828731.1"
                     /translation="MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKTYQSQLIGQH
                     VTHVGTRGKALLTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKLQTADKTIL
                     LYSASDIEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLD
                     QAFLAGLGNYLRVEILWQVGLTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDE
                     NKHHGALFRFKVFHRDGELCERCGGIIEKTTLSSRPFYWCPGCQH"
     gene            complement(6483..7217)
                     /gene="pxpA"
                     /locus_tag="JNZ57_002545"
     CDS             complement(6483..7217)
                     /gene="pxpA"
                     /locus_tag="JNZ57_002545"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HAY8828732.1"
                     /translation="MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQTMQACV
                     REAIKNGVAIGAHPSFPDRENFGRSAMQLPPETVYAQTLYQIGALATIARAQGGVMRH
                     VKPHGMLYNQTAKEAQLADAIARAVYACDPALVLVGLAGSELIRAGKQYGLTTREEVF
                     ADRGYQADGSLVPRSQPGALIENEEQALAQTLEMVQHGRVKSITGEWATVTAQTVCLH
                     GDGEHALAFARRLRSTFAEKEIVVAA"
     gene            complement(7207..8139)
                     /gene="pxpC"
                     /locus_tag="JNZ57_002546"
     CDS             complement(7207..8139)
                     /gene="pxpC"
                     /locus_tag="JNZ57_002546"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpC"
                     /protein_id="HAY8828733.1"
                     /translation="MLKIIRAGMYTTVQDGGRHGFRQSGISHCGALDMPALRIANLLV
                     GNDANAPALEITLGQLTVEFETDGWFALTGAGCEARLDDNAVWTGWRLPMKAGQRLTL
                     KRPQHGMRSYLAVAGGIDVPPVMGSCSTDLNVGIGGLEGRLLKDGDRLPIGKSKRDFM
                     EAQGVKQLLWGNRIRALPGPEYHEFDRASQDAFWRSPWQLSPQSNRMGYRLQGQILKR
                     TTDRELLSHGLLPGVVQVPHNGQPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQ
                     PIHFVQCSLEEALKARQDQQRYFEQLAWRLHNEN"
     gene            complement(8133..8789)
                     /gene="pxpB"
                     /locus_tag="JNZ57_002547"
     CDS             complement(8133..8789)
                     /gene="pxpB"
                     /locus_tag="JNZ57_002547"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HAY8828734.1"
                     /translation="MQRARCYLIGETAVVLELEPPVTLASQKRIWRLAQRLVDIPNVV
                     EAIPGMNNITVILRNPESLALDAIERLQRWWEESEALEPESRFIEIPVVYGGAGGPDL
                     AVVAAHCGLSEKQVVELHSSVEYVVWFLGFQPGFPYLGSLPEQLHTPRRAEPRLLVPA
                     GSVGIGGPQTGVYPLATPGGWQLIGHTSLSLFDPARDEPILLRPGDSVRFVPQKEGVC
                     "
     gene            complement(8812..9555)
                     /gene="ybgI"
                     /locus_tag="JNZ57_002548"
     CDS             complement(8812..9555)
                     /gene="ybgI"
                     /locus_tag="JNZ57_002548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000798886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radiation resistance protein YbgI"
                     /protein_id="HAY8828735.1"
                     /translation="MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTA
                     SQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDA
                     HPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDT
                     GPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHAT
                     ERGGIRALSEWLNENTDLDVTFIDIPNPA"
     gene            9826..11307
                     /gene="dtpD"
                     /locus_tag="JNZ57_002549"
     CDS             9826..11307
                     /gene="dtpD"
                     /locus_tag="JNZ57_002549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide permease DtpD"
                     /protein_id="HAY8828736.1"
                     /translation="MNKHASQPRAIYYVVALQIWEYFSFYSMRALLILYLTNQLKYND
                     THAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSF
                     LYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY
                     AQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLV
                     LLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFF
                     NMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKE
                     SVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAEL
                     FIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINY
                     SINAYIEVFDQITWGALACVGLVLMIWLYQALKFRNRALALES"
     gene            complement(11349..12767)
                     /gene="phrB"
                     /locus_tag="JNZ57_002550"
     CDS             complement(11349..12767)
                     /gene="phrB"
                     /locus_tag="JNZ57_002550"
                     /EC_number="4.1.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HAY8828737.1"
                     /translation="MTTHLVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWAT
                     HNMSPRQAELINAQLNGLQIALAEKGIPLLFREVDDFIASVEIVKQVCAENSVTHLFY
                     NYQYEVNERARDVEVERALRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLK
                     RLREGMPECVAAPKVRSSGSIEPSPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQN
                     GAGEYEQQRDFPAVEGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLSEL
                     IWREFYRHLMTYYPSLCKHCPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQL
                     NSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTD
                     AAPYFRIFNPTTQGEKFDREGEFIRRWLPELRDVPGKAVHEPWKWAQKAGVMLDYPQP
                     IVDHKEARLRTLAAYEEARKGA"
     gene            complement(12764..13273)
                     /locus_tag="JNZ57_002551"
     CDS             complement(12764..13273)
                     /locus_tag="JNZ57_002551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgA family protein"
                     /protein_id="HAY8828738.1"
                     /translation="MNLQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVF
                     LAHSQPEYRKLGPFVADIHQWQNLDDYYNQYRQRVVVLLSHPANPRDHTNVLMHVQGY
                     FRPHIDSTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRV
                     INLRHSGVL"
BASE COUNT         3230 a         3605 c         3300 g         3330 t
ORIGIN      
        1 caccgctact ccagatatcg acctggctcc gacctccagc gaacaaacgc tgaatttctt
       61 tgcctggatg gaacaaattg atcaggctac acctgtaacg ccaggcgcag ttacggcgaa
      121 tgcaacctac gtgctggatt ataaataagt attactttgg cggcgctatc gccgcctttc
      181 ataaaatatt tatcaggtat ggacaccgtg aatatttatc gactctcttt tgtatcctgc
      241 ctggtcgtgg cgatgccttg cgcattggcg gtcgaattca accttaatgt tctcgataaa
      301 tcgatgcgcg accgcattga tatttcatta ttaaaggaaa aaggagtcat tgctcccggt
      361 gagtattttg ttagcgttgc ggtaaataat aaccaaatca gtaacgggca aaagattaac
      421 tggcacaaaa atgacgataa aaccattccg tgcatcaatg atttactggt cgataaattt
      481 ggcttaaaac ctgaagtccg tcagtcgtta ccattgataa atcagtgcgt cgattttagc
      541 tcccgacctg aaatgctctt caatttcgat caagccaatc agcaactgaa tattagtatt
      601 ccgcaagcct ggctggcgtg gcactcagaa aactggaccc caccctccac atggaaagaa
      661 ggtgtcgccg gtgtcctgat ggattacaac ttgtttgcca gcagctaccg cccacaggat
      721 ggcagcagca gcactaatct taacgcctat ggaacagccg gaatcaacac gggggcatgg
      781 cgcttacgca gtgattatca gttgaatcag actgatagcg atgataacca tgaacagtca
      841 ggcgaaatat cacgtaccta tctttttcgc ccgttaccgc aattaggttc aaaattaacc
      901 ctcggcgaaa cggattttag ttccaatatt ttcgacggtt tttcttatac cggtgcggca
      961 ctggcaagtg acgatcgaat gttgccatgg gaactacgcg gctacgcccc acaaattagc
     1021 ggtattgcac agaccaatgc cacggtgacg atcagtcaat caggccgcgt catttaccag
     1081 aaaaaagtcc taccaggccc atttatcatt gacgacctta atcagtctgt tcagggcaca
     1141 ctggatgtca aagtgacgga agaagatggt cgggtgaaca atttccaggt ttcggcagca
     1201 tcgacgccct tcctgactcg tcagggacag gttcgctata aactggccgc gggtcagcca
     1261 cggccctcca tgtcacatca aactgaaaat gaaacctttt ttagcaatga agtttcctgg
     1321 gggatgctgt caaacacctc gctgtacggc ggcctgctgc tttctggtga tgactaccat
     1381 tctgccgcaa tgggtattgg gcaaaatatg ctgtggcttg gtgcgctgtc gtttgatgtc
     1441 acgtgggcca gtagccattt tgatactcag caggacgagc ggggcttaag ctaccgtttt
     1501 aattacagca aacaagtgga tgccactaac agcacgattt ccctcgccgc ttatcgtttc
     1561 tccgatcgtc attttcacag ctacgccaac tatctggatc acaaatacaa cgacagcgat
     1621 gcgcaggacg aaaaacagac gatcagctta tctgtgggcc aaccgattac cccactaaac
     1681 ctcaatcttt acgccaacct gctacatcaa acctggtgga atgcagacgc ctccacgacc
     1741 gccaacatca cggcaggttt taatgttgat attggtgact ggagagatat ctctatttcg
     1801 acgtcattca atacaaccca ttacgaagat aaagatcacg acaaccagat ttacctgtcg
     1861 atttcgctcc ccttcggtaa cggtggtcga gttggctatg acatgcaaaa cagtagccac
     1921 agcaccacac accgcatgtc gtggaacgat acgctggatg aacgtaatag ctggggcatg
     1981 tctgccggac tgcaatccga ccgtcctgac aatggagccc aggtgagcgg caactatcag
     2041 cacctgagtt cagcgggtga gtgggatatt tctggtacct atgccgccaa tgattacagt
     2101 tccgtcagca gcagctggag cggttctttc accgcaaccc aatatggtgc agcgtttcat
     2161 cgccacagct ccaccaatga accacgcctg atggtcagca ccgatggcgt ggcagatatt
     2221 ccggttcagg gcaatctcga ctacaccaac cattttggca ttgcggtggt accgttgatt
     2281 tccagttacc agccttccac cgtggcggtg aacatgaatg acttacccga cggcgtaaca
     2341 gttgcagaaa acgttatcaa agaaacgtgg attgaaggcg cgataggtta caaatcactg
     2401 gcttcccgtt ccggtaaaga cgttaacgtc atcattcgca acgccagcgg tcagtttcct
     2461 cccctcggag cggatatccg ccaggatgac agcggcatta gcgtggggat ggttggcgag
     2521 gaaggacatg cctggttaag cggagtcgct gaaaatcaaa agtttaccgt ggtctggggt
     2581 gataaccagc attgctcgct ccatcttcct gaacatatgg aagacaccgc aaatcgcctg
     2641 attttacctt gtcattaatt aaggaaatga aaatgacatt tatgaaagga ctaccccttt
     2701 tgttgttggt tgccagtctg tgcagccacg ctgcactaca acccgatcgc actcgtattg
     2761 tgtttaacgc taatgataaa gctaccagtc tgcgggtgga taatcgtagc gataaactcc
     2821 cctacctcgc ttattcctgg ctcgaaaatg aaaaagggga gaaaagcgat gatcttctgg
     2881 tcgccctgcc gccgatacaa cgtctggaac cgaaagcaac aacgcaggta cggatagtaa
     2941 agcaagcctc gaccacaaaa ttaccgggcg atcgcgaaac gctatttttc tacaatatgc
     3001 gtgaaattcc tcccgccccg gaaaaaaaca gcgaccatgc cgttctgcaa gtcgccattc
     3061 agagtcgtat caaggtgttc tggcgaccgg ctgcattacg caagaaagca ggagaaaagg
     3121 tcgaactgca gttacaggtc agccagcagg gcaaccaact gacactgaaa aatcctaccg
     3181 cgtattatct gaccattgcc tacttgggac gaaatgaaaa aggcgttctc cccggcttca
     3241 aaaccgtgat ggttgcgcct tttagtacgg tcaacacaaa caccggaaat tatagcggca
     3301 gccagtttta tctcggttat atggatgatt acggcgcgtt acgcatgacg acgctcaact
     3361 gcagcggaca atgccattta caagccgtgg aggcgaagaa atgagtgctg gcaagggagt
     3421 gttgctcgtc atctgtctgt tatttctgcc gttgaagtct gcgcttgccc tgaactgcta
     3481 ctttggttca tccggtggct cggtagaaaa atcagaagcg attcaacctt ttgctgtacc
     3541 aggcaatgcc aaactcggcg ataagatttg ggaatctgac gatattaaaa ttcccgtcta
     3601 ttgtgacaac aataccaacg gcaattttga aagtgagcat gtttatgcct gggtaaaccc
     3661 ctacccgggg gtgcaggatc gctattatca actcggcgta acttacaatg gcgttgatta
     3721 tgacgccaac cagggaaaaa gccgcatcga cactaaccag tgtattgaca gtaagaacat
     3781 tgacatttat acccctgagc agattatcgc gatgggatgg cagaacaaaa tttgctcggg
     3841 tgatcccgct aatattcaca tgtcgcgtac ctttctcgct cgcatgcggt tatacgtcaa
     3901 aatacgagaa atgccgccgc atgattatca aagtacgctt agcgactata tcgtcgtgca
     3961 atttgacggt gccggtagcg ttaacgaaga ccctactgcc caaaacctga aatatcatat
     4021 tactggtctg gaaaacattc gcgtgctgga ttgcagcgtc aatttttcca tttcaccgga
     4081 aacacaggtg attgattttg gtaaatttaa tttgctggat attcgtcgcc acacaatgtc
     4141 gaaaacattc agtattaaga cgacaaaatc acaaaatgac caatgcaccg acggatttaa
     4201 agtcagttcc tccttttata ccgaagaaac gttggttgaa gaagataaag cattgttgat
     4261 tggtaatggt ctgaagctac gtttgctgga tgaaaacgcc tcgccttata ccttcaataa
     4321 atatgctgaa tacgccgatt tcaccagcga catgttggtc tacgaaaaaa cctatacagc
     4381 tgaactttcg tccattgcag gtaccccatc gaggctgggc ccttcgatac agtggtgctt
     4441 tttaaaatta actataactg atttgccatg atgccctttg cagccggaaa gggcatctct
     4501 ttcagaaaat tgctgatttt cctcttttcc ttgattactg ttattttttc ctggcccggc
     4561 tttctttatg ctgtatcgat acaccaaaga gaaaataatg agggagcgaa ggatgccagt
     4621 tttgcagtgg ggaatgttat gtgtgctatc acttatcctt tctattggtt tcctcgcggt
     4681 acatctcccg gcggcgctat tacttgggcc gatgatcgcc gggatcatct tcagtatgcg
     4741 cggaattact ctgcaacttc cccgctccgc ttttctcgcc gcgcaggcca ttcttggctg
     4801 catgattgcg caaaacctca ctggttcgat tctcaccacg ctggccgcca actggccgat
     4861 cgtgcttgct attttactgg tgacgctgct ttccagcgcc atcgtgggtt ggttattggt
     4921 gcgctatagc tcactgcctg gaaataccgg tgcctggggt tcttctccag gcggcgcagc
     4981 ggcaatggtc gctatggcgc aagattacgg cgcagatatt cgcctggtgg cgtttatgca
     5041 atatctgcga gtgctgttcg tcgcgggggc cgctgttctg gtcacctgca tgatgctggg
     5101 tgataacgct gaagcggtta accagcaaat cgtctggttc ccgccagtga gcattaatct
     5161 cctgcttacg attttgctcg cagtcgttgc cggtacggcg ggatgcatgc tgcgtctacc
     5221 ttccggcacg atgctcatcc ggatgctggc gggcgcagtg ctccagtctg gtcagctcat
     5281 caccatcgaa ctaccggaat ggctgctggc gatggcgtat atggcaattg gctggcggat
     5341 tggtcttggt ttcgataaac aaatcttact gcgggcacta cgcccactac cgcaaatcct
     5401 gctgtcgatt tttgctctgc tagctatttg tgcaggtatg gcgtggggac tgacccggtt
     5461 tatgcatatt gattttatga ctgcctacct cgccaccagt cccgacgggc ttgataccgt
     5521 ggcggtcatc gccgcaggga gcaatgccga tatggcgctt attatggcga tgcaaaccct
     5581 gcgcctgttc agtattttgc tgacggggcc agccattgcg cggtttattt caacctatgc
     5641 gccgaagcgg tcggcctagt gctggcagcc tggacaccag taaaacgggc gcgaggacaa
     5701 cgtggttttc tcaatgatgc cgccacagcg ttcgcacagt tcgccatcac gatgaaaaac
     5761 cttaaagcga aacagcgccc catgatgctt attctcatcc acctgccccc gcgtagcgta
     5821 agaaaaccga ggaatctcca gtaacgcgtg tgcgagtgca tccagttgcg ccgcattgag
     5881 atctttcgct ttatgatttc cagtcaaccc aacctgccag aggatctcca cccgcaaata
     5941 attgccaagc ccagccagaa acgcctgatc gagcagtaat cctgcaaact gacggttacg
     6001 aaagcgcggt gacaataacc gttcctttac cacctccggc gtcagattcg gatccagcac
     6061 atcgggacca acgcgttgta aaaacggatg cgtggtcagt tgttccggcc tcaacatctc
     6121 aatatccgag gcgctataaa gcagaatggt tttgtcagcc gtttgcagtt ttacccgcaa
     6181 tactcgcgtg gtctgcggct cttcgccggt atcaaccacg cgccagacgc cgtaaagctg
     6241 attatggctg tagagcgtta agtcgttgga aaaatgagtt aacaacgcct taccacgcgt
     6301 tcccacatgg gtaacgtgtt gaccgataag ttgtgattga taagttttta actgcgggaa
     6361 ggcaaaccag acatcagtta gtggtttgcc tttgatcgcc gcctccaggt tatccgctgc
     6421 acggcggatc tccgggcctt caggcatggt gatatccttt tttcattctt tattaatcgg
     6481 ggttatgctg cgacaacaat ctccttttcg gcaaatgtag agcgtagtcg gcgggcgaac
     6541 gccagtgcgt gctcgccgtc gccatgcagg cagactgttt gcgccgtgac cgttgcccat
     6601 tcgccggtga tacttttgac tctgccgtgt tgcaccatct ctagcgtttg cgccagcgcc
     6661 tgttcttcgt tttcaatcaa cgcgcctggc tgacttcgcg gcaccagcga gccgtcagcc
     6721 tgataaccgc gatcggcaaa cacttcctcg cgcgttgtca ggccatattg cttgcctgca
     6781 cgaatcagct cgcttcctgc cagcccaacg agaaccaatg ctggatcgca agcgtatacc
     6841 gctctggcga tggcgtctgc cagttgtgct tctttcgccg tctggttgta caacatgccg
     6901 tgcggtttga catgacgcat tacgccgcct tgcgcacggg caatcgttgc cagcgcgcca
     6961 atttgataca gcgtctgggc gtaaacggtt tctggcggca gctgcatggc gctgcgacca
     7021 aaattttccc tgtcgggaaa actcgggtga gcgccaatcg cgacaccatt ttttattgct
     7081 tcacgcacgc aagcctgcat ggtttgggca tcgcctgcat gaaatccaca agcaatattg
     7141 gcagaggaaa ccagcgttaa tagctctgcg tcgctggcgc agccttcgcc cagatcggcg
     7201 ttcaggtcaa ttttcattgt gtagccgcca cgctaattgt tcgaaataac gttgttgatc
     7261 ttgccgcgct ttcagtgcct cttccagtga acactggaca aaatgaatcg gctgaccgag
     7321 cggaatttgc gccagatggt acatatcagc ctcaatgata caggcaatac gcgggtaacc
     7381 accggtggtc tgtgcgtcgt tcatcaacac aatcggctgc ccgttatgcg gcacctgcac
     7441 cacacccggt aacaaaccgt gagataacag ttcgcgatcg gtggtgcgtt ttaaaatttg
     7501 cccctgtaag cgatagccca tgcggttact ttgcgggcta agctgccagg gcgaacgcca
     7561 gaatgcatcc tgcgaggcgc gatcgaactc atgatattcc ggccccggca aggcgcgaat
     7621 gcggttgccc cacagcagct gtttaacgcc ctgcgcttcc ataaaatcac gcttcgattt
     7681 gccaatcggg agtcggtcac catccttcag taaacggcct tccagcccgc caatccccac
     7741 gttgagatcg gtgctgcatg accccattac cggcggaaca tcaataccac ccgcgaccgc
     7801 cagataactg cgcatgccgt gctgcgggcg tttaagcgtt aaacgctggc ctgctttcat
     7861 cggcaagcgc cagccggtcc agacggcgtt atcatccagc cgcgcttcgc aaccggcacc
     7921 cgtcagagca aaccacccat cagtttcgaa ctcaaccgtt aactgaccga gcgtgatctc
     7981 cagcgcgggg gcattggcgt cattacccac cagcaggtta gcaatgcgta acgcaggcat
     8041 atccagtgcg ccgcagtggc tgatacccga ctggcgaaaa ccgtgacgac cgccatcctg
     8101 cacagtggta tacatgcccg cacgaataat cttcagcata ctccctcctt ctgcggtaca
     8161 aagcgcacgc tgtctcccgg acgtaataag atgggttcgt cacgcgccgg atcaaacagg
     8221 ctgagtgagg tatgaccaat caactgccag ccacccggcg ttgccagcgg ataaacacca
     8281 gtctgcggcc cgccgatccc gacagaacct gccggaacga gcaagcgcgg ttcagcgcgc
     8341 cgtggcgtgt gtagttgttc cggcaaactc ccgagatacg ggaagcccgg ttgaaaacct
     8401 aaaaaccaga ccacgtattc cacggaggag tgcaattcaa caacctgttt ttcgctcaac
     8461 ccgcaatgcg ccgcgaccac cgccaaatcc ggtccgcctg caccaccgta aaccaccgga
     8521 atttcaataa agcgagactc aggttccagg gcctcgctct cctcccacca gcgttgcaaa
     8581 cgctctatgg catccagcgc cagcgactca ggattacgca aaatcaccgt gatattgttc
     8641 atgccgggaa tggcttcaac cacattcggt atatccacca gacgctgcgc cagtcgccag
     8701 atccgtttct ggctagccag cgtcaccggc ggttccagtt ccagcactac cgccgtttca
     8761 cctatcagat aacaacgcgc tcgttgcact ttcgatccct ctgattattc gttatgcagg
     8821 attaggaata tcaataaagg tcacatcaag atcggtattt tcattcagcc actcgctcaa
     8881 tgcgcgaata ccaccacgtt cagtggcatg gtgacctgca gcataaaaat gcaatccctg
     8941 ctcgcgggct gaatgaatgg tctgttcaga aacttcgcca gtaataaaag catccacgcc
     9001 aaaacgcgcg gcgctatcga taaaactttg cccgccgccc gtgcaccagg cgacgcgctg
     9061 gaccacctca ggtccggtat cgccacacca taacggctta cgtcccagac gcgcttcaat
     9121 ccaggaggct agttccagtc ccggcacagg catggtcagc tctccccacg gcaccaacgg
     9181 ctcaatttcg cccatgaccg tgatccccag taacgccgcc agctgtgcgt tattgcccag
     9241 ctcaggatgt gcgtcaagcg gcaaatgcca gccatacagg ttgatatcat tcgccagcaa
     9301 cgtttttaaa cggttacgct tcattccgcg aatgaccgga gactctcctt tccagaagta
     9361 gccatgatgc acaatgaccg catccgcgcc cagacgcact gcctcatcga gcaaagcctg
     9421 gctggcggtg acaccggtaa caattttttg caccgtctct ttgccttcca cctgcaaacc
     9481 attcggcgcg taatcactaa tcgccgcgct gttcagtttt tcgttaatca gttgttccag
     9541 ttcggtgttt ttcatcttcg cgccttccgt attctgatag ctacaccgtt aacatagcgt
     9601 tacctcgcct gttcgtcgat agccaatctt ttgacatatt aagaaacaaa cccgacgcca
     9661 aaagacgcaa attgtttata tcatcacgct tcagctaatg tatatttatg caatcagaca
     9721 gcatattgca taaataatca gatctgtatc aaagttttaa ctttaaggaa acacaagcac
     9781 gccgcgcaac tattacgtga cgttgccgtc aattgtggaa ttattatgaa taaacacgca
     9841 tctcagccgc gcgctattta ctatgtcgtt gcgctgcaaa tctgggaata ttttagcttt
     9901 tacagcatgc gtgccctgct gattctctat ctcaccaatc aactaaaata caacgatact
     9961 cacgcctacg agttatttag cgcctactgt tcgctggtgt atgtcacgcc aatcctcggt
    10021 ggctttttgg cggataaagt tctcggcaat cgcatggcgg tgatgctggg ggcgttattg
    10081 atggcgatcg gtcatgtggt gttgggtgcc agtgagatcc atccgtcatt cctctatctg
    10141 tccctggcga taatcgtttg tggctatggt ctgtttaaat ccaatgtcag ttgcctgctc
    10201 ggcgagctgt atgagccaac cgatccgcgt cgtgatggcg gtttctcgct gatgtatgca
    10261 gcgggtaacg tggggtctat tatcgcacct attgcctgtg gctacgccca ggaagagtac
    10321 agctgggcga tgggctttgg cctggcggcg gtgggtatga tcgcgggtct ggtcattttc
    10381 ttatgtggca atcgtcattt cacacatacc cgcggcgtta ataaaaaagt actgcgtgcg
    10441 acaaactttc tcctgcctaa ctggggatgg ctgctggttc tgctggtggc aacgcctgcg
    10501 ctgattaccg tattgttctg gaaagagtgg tcggtatacg ccttaattgt cgcgactatt
    10561 attggcctgg gtgtactggc aaaaatttat cgcaaagcag aaaaccagaa acagcgtaag
    10621 gagctggggc tgattgtgac gctcaccttc ttcaatatgt tgttctgggc cttcgcacaa
    10681 cagggcggca gctcgattag cctttatatc gaccgcttcg ttaaccgcga tatgtttggt
    10741 tataccgttc cgactgctat gttccagtcg attaatgcct tcgcagttat gctgtgcggt
    10801 gtgttcctgg cgtgggtggt taaagaaagc gtcgcaggta atcgtaccgt gcgcatctgg
    10861 ggaaaatttg ctcttggtct cggcctgatg agcgccgggt tctgcattct gaccttaagc
    10921 gcccgctggt ccgcaatgta tggtcactct tctctgccac tgatggtatt aggcctggcg
    10981 gtgatgggct ttgcggaact gtttatcgac ccggttgcca tgtcgcaaat tacgcgcatt
    11041 gaaatccccg gtgtgaccgg cgtattaacc ggcatttata tgctgctttc cggcgcgatt
    11101 gcgaactatc tcgcgggcgt gattgccgat cagacatcgc aggcttcgtt tgatgcttcc
    11161 ggggcgatca actactccat caatgcatat attgaagtat ttgatcaaat tacctggggc
    11221 gcactggcgt gtgtaggact ggtactgatg atttggctgt atcaggcgct gaaattcaga
    11281 aaccgcgcgc tggcgctgga gtcataatag gccagcacca tacctgataa aacgctcgct
    11341 gcgttttatc aggctccttt cctcgcttct tcgtacgctg ccagcgttcg cagccttgcc
    11401 tctttgtgat caactatcgg ttgcggataa tccagcatca cacctgcttt ctgcgcccac
    11461 ttccacggct catgcaccgc tttccctggt acatcgcgca gctccggtaa ccatcgacga
    11521 ataaactcgc cctcacggtc aaatttctcg ccctgggttg tcgggttgaa aatacgaaaa
    11581 tacggcgctg catcggttcc ggttgaagcg gcccactgcc agccaccgtt attggctgcc
    11641 aaatcaccat caatcagctg cgacatgaaa tatcgctcgc cttcgcgcca gtcgatcaac
    11701 aaatctttca ccagaaaact ggctgtaatc atccgtagcc ggttatgcat ccagccagtg
    11761 ctgttaagct gacgcatggc agcatcgaca atcgggtatc ccgttttgcc ttcctgccag
    11821 gcctgtaaat gtgcgggatt gctctgccac tgcacacgat ccgtccaggc aataaacgga
    11881 caatgtttac acaacgaggg gtaatacgtc atcagatgac ggtagaactc gcgccagatc
    11941 agctcactaa gccagacact accggcccca ccgtccagcg cctgcggctg ttccgccaac
    12001 aagcgatgca aacactggcg aggcgataac ccgcccgttg ctaggctggc ggacaaacga
    12061 ctggtgcctt ccactgccgg aaaatctcgt tgttgctcat attctccggc accgttctgg
    12121 caaaactggc gtaattgcgc aatcgccgct ttttcttcca ccgggaaatg cgcagtatcg
    12181 aaagactgac gaggataatt cagcgtaatg gatggcgagg gctctatcga tccgctacta
    12241 cgaacttttg gcgcagcgac gcactccggc atcccttccc gcagccgttt cagccaggca
    12301 ttcttaaaag gcgtaaagac tttgtacatc tcgtgattac cggtcatcac cgcgccaggc
    12361 ggcaggatca cgctgtcatc aaatccttca cacaccacgt tacgcagcgc tctttcaact
    12421 tccacatccc gcgcccgctc attcacttca tactgatagt tataaaacag gtgggtaacg
    12481 ctgttttccg cgcacacctg tttaactatt tcgacactgg cgataaagtc atccacttca
    12541 cggaacaata aaggaatacc tttttccgca agcgctattt gtagcccatt cagttgagca
    12601 ttgataagtt cagcctgacg cggcgacatg ttatgcgtcg cccactggcg tggtgtagcg
    12661 atatacaacg ccagcacgcg tgcagacgaa ttgcggcagg cggcagccag tgcgagatta
    12721 tcgtgcaaac gtaaatcctg gcgaaaccag accagatggg tagtcataaa actcctgaat
    12781 ggcgcaagtt aatcacacgc ggccaaagtt cgaaataacg ctgccctgaa agccaggcgt
    12841 caggataaag cgccatatag tgtttgatac gcatcagcgg cgcaagaagt ggttgctcgc
    12901 cacggcgata actatcgata agcgcagcca gctgctggcg ttctgtggaa tcaatatgcg
    12961 ggcgaaaata accctgaacg tgcatcaaaa cattggtgtg atcgcgcggg ttggcggggt
    13021 gagaaagcaa aacaactacg cgttggcggt actggttgta atagtcatcc agattttgcc
    13081 actggtgaat atcagccacg aacgggccaa gtttgcggta ctccggctga gaatgcgcca
    13141 gaaagacgag tttatagcgg ctgtgataat cgagaagcgc cccgcgcgtt aagccatgtt
    13201 ctttcagtcg atgtaactca tgaagggcaa agatacggat tagggtgctg tcatcaaatc
    13261 gttgtagatt cattactgct cctgaacggt ataaaggagt aagtgtagac gatggtaaat
    13321 gaattttatg gggcagagtt tttgcgggga agtattttgt tggtaaaaat attatcaact
    13381 tcatctgagc gagaattatt ctactatttc ccgagctgca ttcatttttt gtatttttta
    13441 tttttagaaa ataacagttc tcaaa
//
LOCUS       DADMHC010000108        13277 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.108, whole genome shotgun sequence.
ACCESSION   DADMHC010000108 DADMHC010000000
VERSION     DADMHC010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13277)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13277)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13277
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.108"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..275
                     /locus_tag="JNZ57_002552"
     CDS             <1..275
                     /locus_tag="JNZ57_002552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828739.1"
                     /translation="IVVPLSTTRDHDKLNRGMHVEIASNVINGLQFFDQQIRWAKADL
                     VQQVSRNRLNRARTYRGYLNQCLPHELVADIQRAVIKSINAISLIN"
     gene            474..755
                     /gene="ppiC"
                     /locus_tag="JNZ57_002553"
     CDS             474..755
                     /gene="ppiC"
                     /locus_tag="JNZ57_002553"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004097481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase PpiC"
                     /protein_id="HAY8828740.1"
                     /translation="MAKTAAALHILVKEEKLALDLLEQIKNGADFGKLAKKHSICPSG
                     KRGGDLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHTQFGYHIIKVLYRN"
     gene            complement(842..2317)
                     /gene="ilvC"
                     /locus_tag="JNZ57_002554"
     CDS             complement(842..2317)
                     /gene="ilvC"
                     /locus_tag="JNZ57_002554"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HAY8828741.1"
                     /translation="MANYFNTLNLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVG
                     CGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLV
                     VNLTPDKQHSDVVRTVQPLMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTE
                     VREEYKRGFGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDL
                     MGEQTILCGMLQAGSLLCFDKLVEEGTDPAYAEKLIQFGWETITEALKQGGITLMMDR
                     LSNPAKLRAYALSEQLKEIMAPLFQKHMDDIISGEFSSGMMADWANDDKKLLTWREET
                     GKTAFETAPQYEGKIGEQEYFDKGVLMIAMVKAGVELAFETMVDSGIIEESAYYESLH
                     ELPLIANTIARKRLYEMNVVISDTAEYGNYLFSYACVPLLKPFMAELQPGDLGKAIPE
                     GAVDNAQLRDVNEAIRCHAIEQVGKKLRGYMTDMKRIAVAG"
     gene            2467..3357
                     /gene="ilvY"
                     /locus_tag="JNZ57_002555"
     CDS             2467..3357
                     /gene="ilvY"
                     /locus_tag="JNZ57_002555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator IlvY"
                     /protein_id="HAY8828742.1"
                     /translation="MDLRDLKTFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEEDLG
                     QPLFVRDNRTVTLTEAGEELRVFAQQTLLQYQQLRHTIDQQGPSLSGELHIFCSVTAA
                     YSHLPPILDRFRAEHPSVEIKLTTGDAADAMEKVVTGEADLAIAGKPETLPGAVAFSM
                     LENLAVVLIAPALPCPVRNQVSSEKPDWSTVPFIMADQGPVRRRIELWFRRNKISNPM
                     IYATVGGHEAMVSMVALGCGVALLPEVVLENSPEPVRNRVMILERSDEKTPFELGVCA
                     QKKRLHEPLIEAFWKILPNH"
     gene            complement(3354..4898)
                     /gene="ilvA"
                     /locus_tag="JNZ57_002556"
     CDS             complement(3354..4898)
                     /gene="ilvA"
                     /locus_tag="JNZ57_002556"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HAY8828743.1"
                     /translation="MADSQPLSGAPEGAEYLRAVLRAPVYEAAQVTPLQKMEKLSSRL
                     DNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLG
                     VKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPPFDHP
                     MVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSA
                     CLKAALDAGHPVDLPRVGLFAEGVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKD
                     LFEDVRAVAEPSGALALAGMKKYIAQHNIRGERLAHILSGANVNFHGLRYVSERCELG
                     EQREALLAVTIPEEKGSFLKFCQLLGGRAVTEFNYRFADAKNACIFVGVRLSRGLEER
                     KEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRF
                     LNTLGTHWNISLFHYRSHGTDYGRVLAAFELGDHEPDFETRLNELGYDCHDETNNPAF
                     RFFLAG"
     gene            complement(4901..6751)
                     /gene="ilvD"
                     /locus_tag="JNZ57_002557"
     CDS             complement(4901..6751)
                     /gene="ilvD"
                     /locus_tag="JNZ57_002557"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HAY8828744.1"
                     /translation="MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFT
                     QFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIAD
                     SVEYMVNAHCADAMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQII
                     KLDLVDAMIQGADPKVSDSQSDQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGN
                     GSLLATHADRKQLFLNAGKRIVELTKRYYEQNDESALPRNIASKAAFENAMTLDIAMG
                     GSTNTVLHLLAAAQEAEIDFTMSDIDKLSRKVPQLCKVAPSTQKYHMEDVHRAGGVIG
                     ILGELDRAGLLNRDVKNVLGLTLPQTLEQYDVMLTQDDAVKNMFRAGPAGIRTTQAFS
                     QDCRWDTLDDDRANGCIRSLEHAYSKDGGLAVLYGNFAENGCIVKTAGVDDSILKFTG
                     PAKVYESQDDAVEAILGGKVVAGDVVVIRYEGPKGGPGMQEMLYPTSFLKSMGLGKAC
                     ALITDGRFSGGTSGLSIGHVSPEAASGGSIGLIEDGDLIAIDIPNRGIQLQVSDAELA
                     ARREAQEARGDKAWTPKNRERQVSFALRAYASLATSADKGAVRDKSKLGG"
     gene            complement(6816..7745)
                     /gene="ilvE"
                     /locus_tag="JNZ57_002558"
     CDS             complement(6816..7745)
                     /gene="ilvE"
                     /locus_tag="JNZ57_002558"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HAY8828745.1"
                     /translation="MTTKKADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYD
                     SHKGPVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIF
                     VGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAK
                     AGGNYLSSLLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSAL
                     PGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEG
                     RCGPVTKRIQQAFFGLFTGETEDKWGWLDQVNQ"
     gene            complement(7765..8028)
                     /gene="ilvM"
                     /locus_tag="JNZ57_002559"
     CDS             complement(7765..8028)
                     /gene="ilvM"
                     /locus_tag="JNZ57_002559"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 small subunit"
                     /protein_id="HAY8828746.1"
                     /translation="MMQHQVNVSARFNPETLERVLRVVRHRGFHVCSMNMAAASDAQN
                     INIELTVASPRSVDLLFSQLNKLVDVAHVAICQSTTTSQQIRA"
     gene            complement(8025..9671)
                     /locus_tag="JNZ57_002560"
     CDS             complement(8025..9671)
                     /locus_tag="JNZ57_002560"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001012636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 catalytic subunit"
                     /protein_id="HAY8828747.1"
                     /translation="MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGGVEHLLC
                     RHEQGAAMAAIGYARATGKTGVCIATSGPGATNLITGLADALLDSIPVVAITGQVSAP
                     FIGTDAFQEVDVLGLSLACTKHSFLVQSLEELPRIMAEAFDVASSGRPGPVLVDIPKD
                     IQLASGDLEPWFTTVENEVTFPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALRE
                     FLATTKMPSTCTLKGLGAVEADYPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDR
                     VTGKLNTFAPHASVIHMDIDPAEMNKLRQAHVALQGDLNALLPELQQPLNINDWQQYC
                     AQLRDEHAWRYDHPGDAIYAPLLLKQLSDRKPADCVVTTDVGQHQMWAAQHIAHTRPE
                     NFITSSGLGTMGFGLPAAVGAQVARPNDTVVCISGDGSFMMNVQELGTVKRKQLPLKI
                     VLLDNQRLGMVRQWQQLFFQERYSETTLTDNPDFLMLASAFGIPGQHITRKDQVEAAL
                     DTMLNSDGPYLLHVSIDELENVWPLVPPGASNSEMLEKLS"
     gene            complement(9674..9724)
                     /locus_tag="JNZ57_002561"
     CDS             complement(9674..9724)
                     /locus_tag="JNZ57_002561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828748.1"
                     /translation="MNNSTKFCFSTFSTGN"
     gene            complement(9810..9908)
                     /gene="ilvL"
                     /locus_tag="JNZ57_002562"
     CDS             complement(9810..9908)
                     /gene="ilvL"
                     /locus_tag="JNZ57_002562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ilv operon leader peptide"
                     /protein_id="HAY8828749.1"
                     /translation="MTALLRVISLVVISVVVIIIPPCGAALGRGKA"
     gene            10259..11779
                     /locus_tag="JNZ57_002563"
     CDS             10259..11779
                     /locus_tag="JNZ57_002563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418214.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HAY8828750.1"
                     /translation="MSLSIVHTRAALGVNAPPITVEVHISKGLPGLTKVGLPETTVKE
                     ARDRVRSAIINSGYEYPAKKITINLAPADLPKEGGRYDLPIAIALLAASEQLTANKLD
                     EYGLVGELALTGALRGVPGAISSTTEAIKSGRKIIVAKDNEDEVELINGEGCLIADHL
                     QAVCAFLEGKHALERPKPTDAVSRALQHDLSDVIGQEQGKRGLEITAAGGHNLLLIGP
                     PGTGKTMLASRINGLLPDLSNEEALESAAILSLVNAESVQKQWRQRPFRSPHHSASLT
                     AMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIESGQIHLSRTRAKITY
                     PARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPRI
                     LSKAVVPGESSATVKQRVMAARERQFKRQNKLNAWLDSPEIRQFCKLESEDAMWLEET
                     LIHLGLSIRAWQRLLKVARTIADIDQFDIITRQHLQEAVSYRAIDRLLIHLQKLLT"
     gene            complement(11804..12142)
                     /gene="maoP"
                     /locus_tag="JNZ57_002564"
     CDS             complement(11804..12142)
                     /gene="maoP"
                     /locus_tag="JNZ57_002564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ori organization protein MaoP"
                     /protein_id="HAY8828751.1"
                     /translation="MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNE
                     LDLGKREPVTEEEKLFVAVCRGEREPVTEAERVWSKYMTRIKRPKRFHTLSGGKPQVE
                     GAEDYTDSDD"
     gene            12261..13100
                     /gene="hdfR"
                     /locus_tag="JNZ57_002565"
     CDS             12261..13100
                     /gene="hdfR"
                     /locus_tag="JNZ57_002565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator HdfR"
                     /protein_id="HAY8828752.1"
                     /translation="MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLG
                     VNLFTRHRNNIRLTAAGEKLLPYAEMLMSTWQAARKEVAHTSRHNEFSIGASASLWEC
                     MLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQL
                     LGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQ
                     IAMLNGCTWLPVSWARKKGGLHTVVDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLD
                     EVY"
     gene            complement(13196..13271)
                     /locus_tag="JNZ57_002566"
     tRNA            complement(13196..13271)
                     /locus_tag="JNZ57_002566"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(13236..13238),aa:Trp,seq:cca)
BASE COUNT         3075 a         3591 c         3441 g         3170 t
ORIGIN      
        1 gtatcgtcgt tccattatca accactcgcg atcatgacaa gttaaatcgt ggaatgcatg
       61 ttgaaatagc cagtaatgtt atcaatggcc tgcaattctt tgatcagcag attcgttggg
      121 ccaaagccga cctggtacaa caagtcagtc gaaaccgatt aaatagagca aggacttaca
      181 gagggtatct taatcaatgt ttgccacatg agttggttgc agacatacag agggcggtca
      241 tcaagtcaat caatgccata tcgctcataa attgacaata aaataaccat ccccgataat
      301 gactttgtag cccatagagg ccctaagttt tctccccttg agggacctgc gaagcccgga
      361 ttttccgggc ttttgccata tatgtaccag cccctccctg actgacaatt acgttagcat
      421 ctgcggatca tgctaaaatc gccgcctgac aattattcac tcaaggcacg atcatggcaa
      481 aaacagcagc agcactgcat atccttgtaa aagaagagaa actggctctg gatcttctcg
      541 agcagattaa gaacggtgcc gatttcggca agctggcgaa gaaacactcc atttgcccat
      601 caggcaaacg cggcggtgat ttaggtgaat tccgccaggg tcagatggtt ccggcgttcg
      661 ataaagttgt gttctcttgt ccggtactgg agccgaccgg cccgctgcac acccagttcg
      721 gttaccacat cattaaggtg ctgtaccgta actaatagca aggccttctc ctggagaagg
      781 ccttgagtgt tttctccctc tccctgtggg agagggtcgg ggtgaggaca tcagcgcgca
      841 cttaacccgc aactgcaata cgtttcatat ccgtcatata gccgcgcagt ttcttaccta
      901 cctgctcaat cgcatggcag cgaatcgctt cgttcacatc acgcagttgc gcgttatcta
      961 ccgcaccttc cggaatagct ttacccagat cgcccggttg cagctctgcc ataaacggtt
     1021 tcagcaacgg cacacaagcg taagagaaca gatagttacc gtactcagcg gtatcagaga
     1081 taaccacgtt catttcgtac agacgcttac gggcgatggt gttggcaatc agcggcagct
     1141 cgtgcagtga ttcataatat gcagactctt caatgatgcc ggaatcgacc atggtttcaa
     1201 acgccagctc aacgcccgct ttcaccatcg cgatcatcag tacgccttta tcgaagtact
     1261 cctgctcgcc gattttgcct tcatactgcg gcgcggtttc gaaggcggtt ttgccggtct
     1321 cttcacgcca ggtcagcagt ttcttatcat cgttggccca gtccgccatc ataccggagg
     1381 agaattcgcc ggagatgatg tcgtccatat gtttctggaa caggggtgcc atgatctctt
     1441 tcagctgttc agacagcgcg taagcacgca gtttcgccgg gttagagaga cggtccatca
     1501 tcagggtgat gccgccctgc ttcagcgctt cggtgatggt ttcccaaccg aactgaatta
     1561 gtttttctgc gtatgccgga tcggtgccct cttccaccag cttgtcgaag cacagcagcg
     1621 agccagcctg caacataccg cacaggatgg tttgctcacc catcaggtca gatttcactt
     1681 ccgcaacgaa ggacgattcc agcacgcccg cacggtgacc accggttgct gccgcccatg
     1741 ctttagcgat cgccatgcct tcgcctttcg gatcgttttc cgggtgaacg gcaatcagcg
     1801 tcggtacgcc gaatccacgt ttgtactctt cacgcacttc ggtgccaggg catttcggcg
     1861 caaccatgac tacggtgatg tctttacgga tctgctcgcc cacttcgacg atgttgaaac
     1921 cgtgcgagta acccagcgcc gcgccgtctt tcatcagtgg ctgtacggtg cgcactacgt
     1981 cggagtgctg cttgtctggc gtcaggttaa ccaccagatc cgcctgcggg atcagttctt
     2041 cgtaagtgcc cactttaaaa ccgttttcgg tcgctttacg ccaggatgcg cgcttctcgg
     2101 caatcgcttc tttacgcaga gcgtaggaga tatcgagacc agaatcacgc atgttcaggc
     2161 cctggttcag cccctgtgcg ccacagccga cgataaccac ttttttaccc tgaaggtagc
     2221 tcgcgccgtc ggcgaattcg tcgcgcccca taaagcgaca tttgcccagc tgtgccagct
     2281 gctggcgcag gttcagtgta ttgaagtagt tagccatggt gattcctcgt gatgttgtgc
     2341 ttcttattgt tcggttcgcg tttgcgagat tgaattcact atatgacagg aaatttattg
     2401 cggaaattga tatattcaca acgtcacatt gcaatttctg caacgtcaac attgagggct
     2461 gctccattgg atttacgcga tctgaaaacc ttcctgcatc tggcggaaag ccgccatttt
     2521 ggccgcagcg cgcgggcgat gcacgttagc ccatccacgc tctcacggca gattcagcgc
     2581 ctggaagaag atcttggtca gccgctattt gtgcgcgata accgcacggt gacgctgact
     2641 gaagcgggcg aagagctgcg cgttttcgcc cagcaaacgc tgttgcagta tcagcagttg
     2701 cgccacacca tcgatcagca agggccgtcg ctctctggcg aattacatat cttctgctcg
     2761 gtgaccgctg cctacagcca tctgccaccg attctcgacc gcttccgcgc ggaacacccg
     2821 tcggtggaga tcaaactaac cactggtgat gcggcagatg cgatggaaaa ggtagtcact
     2881 ggcgaagcgg atctggcgat tgccgggaaa ccggagactc tgcccggcgc agtggcgttt
     2941 tcgatgctgg agaatctggc agtagtgctg attgcgcccg cgctgccctg cccggtgcgt
     3001 aaccaggttt cgtcagagaa gccggactgg tctacagtgc cgtttatcat ggccgatcag
     3061 ggaccggtac gccgccgcat tgaactgtgg tttcgacgca ataaaatcag caacccgatg
     3121 atttacgcca cggttggcgg gcatgaagcg atggtatcga tggtggcgct cggctgtggc
     3181 gtggcgctgt tgccggaagt agtgctggaa aacagccccg aaccggtgcg taaccgcgtg
     3241 atgattttag agcgcagcga tgaaaaaacg ccgtttgaac tgggcgtttg tgcgcagaaa
     3301 aagcggctgc atgagccgct gattgaggcg ttctggaaga ttttgccgaa ccattaaccc
     3361 gccaaaaaga acctgaacgc cggattattg gtttcgtcgt ggcaatcgta gcccagctca
     3421 tttagccggg tttcgaaatc cggttcatgg tcgccgagtt cgaacgccgc cagtacgcgc
     3481 ccgtagtcgg tgccatggct gcgatagtgg aacaaagaaa tgttccagtg cgtacccagc
     3541 gtgttgagga agcgcagcag cgcgcccggt gattccggga attcgaagct gtagaggcgt
     3601 tcctgcaacg gatgtgacgg acgcccgccg accatatagc gcacatgcaa cttcgccatt
     3661 tcgtcgtcgg agagatccac cacgctgtag ccgccgtcgt tgagcatctg caaaatttct
     3721 ttgcgctctt cgaggccgcg gctcaggcgc acgccgacaa agatgcaggc gtttttggca
     3781 tcggcaaaac ggtagttgaa ctcggtgacc gctcgcccgc caagcagttg gcagaatttg
     3841 aggaagctgc ctttttcttc cggaatggtc accgccaaca acgcttcacg ctgttcgccc
     3901 agttcgcagc gttccgagac gtagcgcagg ccgtggaagt tcacgttggc accggaaaga
     3961 atatgcgcca gccgttcgcc gcgaatgttg tgctgggcga tatatttttt cattcccgcc
     4021 agcgccagcg cgccagaggg ttccgccacc gcgcgcacat cttcgaataa atccttcatc
     4081 gccgcacaga tcgcatcact atcgacggtg atgatgtcgt cgagatactc ctggcataaa
     4141 cggaaggttt cgtcaccgat gcgttttacc gctacgcctt cagcaaatag ccctacgcgc
     4201 ggcagatcaa ccggatgacc cgcatccagc gctgctttca ggcaggcgga gtcttccgct
     4261 tctacggcga tcactttgat ttgtggcatc agttgtttga tcagcaccgc aacgcccgcc
     4321 gccagaccgc cgccgccgac tggcacaaat acgcggtcga gatgggcgtc ctgctggagc
     4381 agttccagcg ccagcgtgcc ttgcccggca atcaccatcg gatggtcgaa cggcggcacc
     4441 caggtgaacc cctgctgctg tgacagttcg atcgctttag ctttcgcttc gtcaaagttc
     4501 gcgccatgaa gcagcacttc gccgccgaat ccacgtaccg catcgacttt gatatcggcg
     4561 gtggcggttg gcataacgat cagggccttc acgcctaacc gcgcagaaga aaacgcgacg
     4621 ccctgcgcgt ggttacccgc agaagcagtg atcacgccgt gcgctttttg ttcttccgtc
     4681 aggcccgcca tcatggcgta tgcgccgcgc agcttaaagc tgtgcactgg ctggcgatct
     4741 tcgcgcttca ccagaatgac gttatcaaga cgcgacgaca gtttttccat tttttgtagc
     4801 ggcgtaacct gcgctgcctc gtaaaccggc gcgcgcagca ctgctcttaa atattcggca
     4861 ccttccggag caccggacag gggttgcgag tcagccatta ttaacccccc agtttcgatt
     4921 tatcgcgcac cgcacctttg tcggcgctgg ttgccaggct ggcgtaggcg cgcagggcaa
     4981 aggaaacctg acgttcacgg tttttcggcg tccaggcttt gtcaccccga gcttcctgcg
     5041 cttcacgacg cgccgccagt tcggcatcgc ttacctgtaa ctgaatgcca cggttcggga
     5101 tgtcgatagc gatcaggtca ccatcttcaa tcagaccaat gctgccgccg cttgccgctt
     5161 ccggtgagac gtggccgatg gaaagaccag aggtgccgcc agagaaacga ccgtcggtga
     5221 tcagcgcaca ggctttaccg agacccattg atttcaggaa gctggttggg tagagcattt
     5281 cctgcatgcc agggccgcct ttcgggcctt catagcggat caccaccaca tcgcccgcga
     5341 caactttgcc accgaggatc gcttctaccg cgtcgtcctg gctttcgtac acttttgccg
     5401 ggccggtgaa tttgaggatg ctgtcatcga cgcccgcggt tttcacgatg cagccgtttt
     5461 cagcaaaatt accgtagagc accgccaggc cgccgtcttt gctgtaggcg tgttccagcg
     5521 agcggataca gccgtttgcg cgatcgtcgt ccagcgtatc ccaacggcaa tcttgcgaga
     5581 atgcctgggt ggtacggata cccgcagggc cggcgcggaa catatttttt accgcgtcat
     5641 cctgggtcag cataacgtcg tattgctcca gcgtttgcgg caacgtcagg ccgagcacgt
     5701 ttttcacatc acggttcagt aaccccgcgc gatccagttc gccgagaata ccgataacac
     5761 caccagcacg gtgaacatct tccatatggt atttctgggt gctcggcgca actttacaca
     5821 gctgtggaac cttgcgggaa agcttatcga tatcactcat ggtgaagtcg atttccgctt
     5881 cctgcgccgc cgccagcagg tgaagtacgg tgttagtcga tccacccatc gcgatatcca
     5941 gcgtcatggc gttttcaaac gccgccttac tggcgatatt acgcggcagt gcactttcgt
     6001 cgttttgctc gtaataacgt ttggtcaatt caacaatgcg tttaccagca ttaaggaaca
     6061 gctgcttacg gtccgcgtgg gttgccagca gcgagccgtt gcctggctgc gacaaaccca
     6121 gcgcttcggt caggcagttc attgagttag cggtaaacat cccggagcag gaaccgcagg
     6181 ttgggcaggc ggaacgttca acctgatcgc tctgggagtc agaaactttc gggtctgcgc
     6241 cctggatcat cgcatcaacc agatcgagtt tgattatctg atcggacagt ttggttttcc
     6301 cggcctccat cgggccgccg gaaacaaaga tcaccggaat attcaggcgc agggaagcca
     6361 tcagcatccc cggggtgatt ttgtcgcagt tagagatgca gaccatggcg tcggcgcagt
     6421 gggcgttgac catatactca acggaatcag cgatcagttc gcgagatgga agtgaataaa
     6481 gcatcccccc gtggcccatg gcaatcccat catccaccgc aatggtgttg aactctttgg
     6541 caacgccgcc agccgcttca atttgttcgg cgaccagttt accgagatcg cgcagatgga
     6601 cgtgacccgg tacaaattgg gtgaacgagt tcacaaccgc gataatcggc ttgccaaaat
     6661 cggcgtcggt cattccggtg gcgcgccaca gcgcacgagc acccgccata ttacgaccat
     6721 gagtggtggt ggcggaacgg tacttaggca tactttattt actcccagtg tctgtctcgt
     6781 aaatgggacg gtgcgtgccg tcccattttt tgtatttatt gattaacttg atctaaccag
     6841 ccccatttat cttcggtttc gccagtgaag aggccgaaga aggcttgctg aatgcgtttg
     6901 gtaaccgggc cacaacggcc ttcgccaacc tgaataccgt ctacgctgcg cactggcgtg
     6961 atttctgccg cagtaccgga cataaacact tcatccgcca ggtacaggga ttcgcgcgac
     7021 agcacctgct cacgcacttc aattcccagc tctttcgcca gtttgatgat ggcatcacgg
     7081 gtaatacccg gcagcgcgga tgaggtaaac ggtggggtga acagcacgcc gtctttcact
     7141 tcaaacaggt tttcacctgc gccttcagag atgtaaccgt tcacatccag cgcgatacct
     7201 tcctgataac cgtggcggcg cgcttcgcta cccaccagca gggaagagag gtagttacca
     7261 ccggcttttg ccgccgtcgg gatggtgttt ggtgctgcgc ggttccagga ggaaaccatc
     7321 gcatcgatcc cctgctccag cgcttctgcg cccaaatacg ctccccacgg gaaagcagcg
     7381 ataatcacgt cggttgagta tcccgctggc gggtttactc ccatgccaac atcaccgacg
     7441 aagatcagcg gacggatata ggcgctggtg agattatttt tgcggatcac gtcacgacaa
     7501 gcttccatca gctcatcaat gctctgcgaa accgggaagc gatagatttt ggcggagtca
     7561 tgcagacgct gcatatgctc acgatggcgg aatacaaccg gtcctttgtg cgagtcgtag
     7621 caacggatgc cttcaaaaac cgaagtgcca tagtgcagcg cgtgcgacat cacatgcacc
     7681 ttcgcgtctt cccagcgaac catctcccca ttgaaccaaa tgtaatcagc tttcttcgtg
     7741 gtcattttta tatacctttt gcgctcaggc gcggatttgt tgtgatgtgg ttgtgctctg
     7801 gcagatggca acgtgtgcga cgtccaccag tttatttaac tgactaaaca gtaagtcgac
     7861 cgaccgtggg ctggcaacgg tcaattcgat atttatattt tgtgcatcgc tggcggcggc
     7921 catattcatt gagcagacgt ggaaaccacg atgacgcacc acgcgtaaaa cacgttctaa
     7981 ggtttccgga ttgaagcgag ccgatacatt gacctgatgt tgcatcatga taatttctcc
     8041 aacatttctg aattactggc gccaggcggc accagcggcc agacgttctc aagttcgtcg
     8101 attgagacat gaagcaggta tggcccatca ctgttcagca tggtgtcgag tgccgcttca
     8161 acctggtctt tacgggtgat gtgttggcca gggatgccga aggcgctggc taacatgagg
     8221 aaatcggggt tatcagtaag ggtggtttcg ctgtatcgtt cctgaaaaaa cagttgctgc
     8281 cattgtcgaa ccatccctaa ccgttggtta tcgagtaaga cgattttcaa cggtaactgc
     8341 ttgcgtttta cggtgcccag ctcttgcaca ttcatcatga aagagccgtc accggagata
     8401 cagacgacgg tatcgttcgg tcgcgcgact tgtgcgccaa ccgccgctgg taaaccaaaa
     8461 cccatagtgc ctaagccgct ggaggtgatg aaattttccg ggcgagtgtg ggcgatgtgt
     8521 tgcgcagccc acatctggtg ctgccccaca tctgtggtca cgacgcaatc cgcaggttta
     8581 cgatccgaca gttgttttaa caacaacggc gcgtagattg cgtcgccggg atggtcgtaa
     8641 cgccaggcat gttcatcacg cagctgcgcg cagtattgct gccagtcatt gatatttaac
     8701 ggctgctgta attctggtaa cagagcattt aaatcacctt gtaatgccac atgtgcctga
     8761 cgcagcttgt tcatttctgc cgggtcgata tccatatgga taacgctggc gtgtggtgcg
     8821 aaggtgttca gtttgccggt cacccggtca tcaaaacgtg cacccacggc gatcagcaag
     8881 tcgcactcct gcaccgcgaa gttcgccgct ttggtgccat gcattcccag catgcccaga
     8941 tagtacggat aatctgcttc aactgcgccc agccctttca gcgtgcaggt ggaaggcatt
     9001 tttgtggtag cgagaaattc tcgtaaagca ggaactgcct gcgccatacc cacgccacca
     9061 ccaacgtaca gcatcggttt ttgcgctttt gccagcatct ggcgcgcttg ctcaacttcg
     9121 gcatgtggga aagtcacttc gttttcaacg gtggtgaacc acggttccag gtcaccgctg
     9181 gctagctgga tatcttttgg gatatcgacc agaaccggac caggacgacc tgagctggca
     9241 acgtcgaatg cttcagccat aatgcgcggc aactcttcca gcgactgcac cagaaagctg
     9301 tgcttggtac aggctaacga caatcccagg acatccactt cctgaaatgc atcagtgccg
     9361 ataaacggtg cggacacttg accggtgatg gcaacaacag ggatagaatc taacagtgcg
     9421 tccgcaagcc cggttatcag gttggttgcg cccggaccag acgtggcgat acatacgcca
     9481 gttttgccgg tagcacgggc ataaccgata gccgccattg ccgcaccctg ctcatgtcgg
     9541 cacagcaagt gctccacgcc gccgtcatac aatgcatcgt aaaccggcat aattgcgcca
     9601 cccggataac cgaaaacggt gttcacaccc tgtgcccgca acgcatgtac cacccactgt
     9661 gcgccattca tagttagttc cccgtgctga atgttgagaa acagaatttt gtgctgttat
     9721 tcattgtctg ctcctcggtt atgtttttaa ggtcaaaaaa aaccccggac ctttcggtgc
     9781 ggggggctta gttcgttaag gcttgatttc taagcctttc ctcgtccaag tgcagccccg
     9841 cacggtggga taataatcac caccacgcta atcacgacca ggctaatcac tcgtagaagg
     9901 gctgtcattt tgtcttttct tgcatcttgt tcgaaggaat gcctaaagag ttaccatagg
     9961 ttttgtaaat agtacaagat attttttgtc cgatttttat gatgcgttta ataatttcaa
    10021 tataagttgt tgttttttaa aataaaatag tgagtaaaaa aattcaattt cagtatgaat
    10081 gttgttccct tcctcgttgt tcatcctttg tccgctgcat ttttgcgagc atcattccac
    10141 cgccagaaca actcaacttc acttgcacaa ataaacagga atcagccact aaaattcacg
    10201 aattagcggg ctacagcagc gatatcttat gcacataatg gttactcaag gagggcttat
    10261 gtcactgtca attgttcata cccgcgcagc cctgggagta aatgcgcccc cgatcactgt
    10321 tgaggtacat atcagtaaag gtctacccgg cttaacgaag gtgggcttac cagaaacaac
    10381 ggtaaaagaa gctcgcgatc gcgtgcgcag cgccattatc aatagcggat atgaatatcc
    10441 ggcgaaaaaa atcaccatca acctggctcc agctgatctg ccaaaagaag ggggacgata
    10501 tgatttacct atcgccattg cgttgctggc ggcctcagaa cagcttacag ccaataagtt
    10561 agatgaatat ggattagtcg gagaactggc gcttacaggc gctctgcgtg gcgttcccgg
    10621 cgcaatctcc agtacaactg aagctattaa gtcgggcaga aaaattatcg tcgcgaaaga
    10681 taacgaagat gaagtggagc taattaacgg tgaaggatgc ctgatagccg atcatctgca
    10741 agctgtctgt gcgtttctgg aaggtaagca cgctctcgaa cgcccgaaac caactgatgc
    10801 agtatcccgg gcgctacaac atgatctcag tgatgttatc ggtcaggaac aaggaaagcg
    10861 agggctggaa attaccgccg ctggcgggca caacctttta ctgattgggc cgccgggaac
    10921 aggtaaaaca atgctcgcca gccgtattaa tggcctgtta ccagatttaa gcaatgaaga
    10981 ggcactggag agtgctgcga tattaagtct ggtaaatgct gaatcagtac aaaaacaatg
    11041 gcggcagcgc ccgttccgct cacctcatca cagtgcatcg ttaactgcga tggtaggcgg
    11101 tggcgcaatt ccagggcccg gtgaaatttc gctggcgcat aacggcgtgc tttttcttga
    11161 tgagttacct gaatttgaaa ggcgtacact ggatgccttg cgagagccga ttgaatccgg
    11221 gcagatccat ctttcacgca cgcgagcaaa aataacctat ccagcccgtt tccagcttgt
    11281 cgcggcgatg aatcccagcc ctaccggaca ttatcaggga aaccataacc gctgcacacc
    11341 agagcaaacg ctgcgttatc tcaaccgact ctctggtccc tttctcgacc gcttcgatct
    11401 ctcactggag atcccattac cgcctccccg tattttgagt aaagcggtag tgccgggaga
    11461 aagcagcgcc accgttaaac aacgcgtaat ggccgccaga gagcgccaat ttaagcggca
    11521 gaataaactg aacgcctggc tggatagtcc ggaaatacgc caattctgca aacttgagag
    11581 cgaagatgcg atgtggctgg aagaaacgct gatccatctg gggttatcga ttcgtgcctg
    11641 gcagcggtta ttgaaagttg cacgaaccat tgctgatatt gatcagtttg acattatcac
    11701 acgtcaacat ttgcaggagg cagttagcta tcgagcgatt gaccgtttgc tcatccatct
    11761 gcagaaacta ctgacataaa aaaagggcat ttcgcccttt ttattaatcg tcagaatcgg
    11821 tgtagtcttc agcaccttca acctgcggtt taccgccgga aagggtgtga aaacgttttg
    11881 gacgcttaat acgcgtcata tacttggacc acacgcgttc tgcttctgtc actggctcac
    11941 gttcgccacg gcatactgct acgaagagtt tctcttcctc ggtaaccggc tcgcgtttgc
    12001 caagatccaa ctcattgaag gcataaccat gacgctcaag cagttgtgcc tctttgatgg
    12061 tgaaatcacc atgacgagag aatccacgtg gataatgttt attgtcgaaa tatcgattag
    12121 tcgtcgtaaa gctttccgcc atcctgcacg ctcctaattc tttgaccgag ctagttatgg
    12181 cgcggagtat tagttacgct tgacagagtg taaaacaaaa catttaaatc ataacgacaa
    12241 ataattttgc ggagagcact gtggatacgg aattgttaaa aactttcctg gaagttagcc
    12301 gaacgcgtca ctttggtcga gcggctgaat cgctctatct gacccagtca gcagtgagct
    12361 ttcgaatcag acaactggaa aatcaactgg gtgtgaacct tttcacccgc cacagaaaca
    12421 atatccgttt aaccgctgcc ggtgaaaaac tactgcctta tgcagaaatg ctcatgagca
    12481 cctggcaggc cgcccgcaag gaggtggcgc atacctcacg acataacgag ttttctatcg
    12541 gtgccagcgc ctcattgtgg gaatgtatgc ttaatcagtg gctgggacgt ttgtatcaaa
    12601 atcaggatgc ccatacaggc ttacagttcg aagcgcgaat tgcccaacgg cagtctctgg
    12661 taaaacagct gcatgaacgc cagcttgatc ttcttattac cactgaagcg cccaaaatgg
    12721 acgaatttag tagtcagttg ctgggatatt tcactttagc gctttatacc agtgcccctt
    12781 caaaactaaa gggagatctt aattatctgc gacttgagtg ggggccagat tttcaacagc
    12841 atgaggcagg tttgatcggt gctgacgaag tgcccattct gacaaccagt tctgctgaac
    12901 tggcacagca acagattgcg atgcttaatg gttgcacctg gctacccgtc agctgggcgc
    12961 gtaaaaaagg cggcctgcat accgttgtcg atagcacaac actttcacgg ccgctttatg
    13021 ccatatggct gcaaaatagc gataaaaatg cgttgattcg cgatcttttg aaaattaacg
    13081 tgctggatga agtgtattaa tatgaatggc tggcaaggat gccggtagaa ggatttactt
    13141 cggagagggt tatttcagat aaaaaaaatc cttagctttc gctaaggatg atttctggca
    13201 ggggcggaga gactcgaact cccaacaccc ggttttggag accggtgctc taccaattga
    13261 actacgcccc taattag
//
LOCUS       DADMHC010000109        13214 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.109, whole genome shotgun sequence.
ACCESSION   DADMHC010000109 DADMHC010000000
VERSION     DADMHC010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13214)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13214)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13214
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.109"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..1157)
                     /gene="hemX"
                     /locus_tag="JNZ57_002567"
     CDS             complement(<1..1157)
                     /gene="hemX"
                     /locus_tag="JNZ57_002567"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HAY8828753.1"
                     /translation="MTEQEKTSAVVEETREAVDTTSQPVATEKKSKNNTALILSAVAI
                     AIALAAGVGLYGWGKQQAVNQTATSDALANQLTALQKAQESQKAELEGIIKQQAAQLK
                     QANRQQETLAKQLDEVQQKVATISGSDAKTWLLAQADFLVKLAGRKLWSDQDVTTAAA
                     LLKSADASLADMNDPSLITVRRAITDDIASLSAVSQVDYDGIILKLNQLSNQVDNLRL
                     ADNDSDGSPMDSDGEELSSSISEWRINLQKSWQNFMDNFITIRRRDDTAVPLLAPNQD
                     IYLRENIRSRLLVAAQAVPRHQEETYRQALENVSTWVRAYYDTDDATTKAFLDEVDQL
                     SQQNISMDLPETLQSQAMLEKLMQTRVRNLLAQPAAGTTEAKPAPAPAPAPA"
     gene            complement(1179..1919)
                     /gene="hemD"
                     /locus_tag="JNZ57_002568"
     CDS             complement(1179..1919)
                     /gene="hemD"
                     /locus_tag="JNZ57_002568"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HAY8828754.1"
                     /translation="MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLA
                     DQLAALGESDLLFALSQHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQK
                     ILYPQDREISEVLLQLPELQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCKCYQR
                     CAIHYDGAEEAMRWQSREVTMVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERL
                     AKLARELGWQDIKVADNADNDALLRALQ"
     gene            complement(1916..2857)
                     /gene="hemC"
                     /locus_tag="JNZ57_002569"
     CDS             complement(1916..2857)
                     /gene="hemC"
                     /locus_tag="JNZ57_002569"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HAY8828755.1"
                     /translation="MLDNVLRIATRQSPLALWQAHYVKDKLMTSHPGLVVELVPMVTR
                     GDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICERE
                     DPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLD
                     NGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAA
                     LNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGER
                     RGAPQDAEQMGISLAEELLNNGAREILAEVYNGDAPA"
     gene            3244..5790
                     /gene="cyaA"
                     /locus_tag="JNZ57_002570"
     CDS             3244..5790
                     /gene="cyaA"
                     /locus_tag="JNZ57_002570"
                     /EC_number="4.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate cyclase"
                     /protein_id="HAY8828756.1"
                     /translation="MYLYIETLKQRLDAINQLRVDRALAAMGPAFQQVYSLLPTLLHY
                     HHPLMPGYLDGNVPKGICLYTPDETQRHYLNELELYRGMSVQDPPKGELPITGVYTMG
                     STSSVGQSCSSDLDIWVCHQSWLDSEERQLLQRKCSLLESWAASLGVEVSFFLIDENR
                     FRHNESGSLGGEDCGSTQHILLLDEFYRTAVRLAGKRILWNMVPCDEEEHYDDYVMTL
                     YAQGVLTPNEWLDLGGLSSLSAEEYFGASLWQLYKSIDSPYKAVLKTLLLEAYSWEYP
                     NPRLLAKDIKQRLHDGEIVSFGLDPYCMMLERVTEYLTAIEDFTRLDLVRRCFYLKVC
                     EKLSRERACVGWRRAVLSQLVSEWGWDEARLAMLDNRANWKIDQVREAHNELLDAMMQ
                     SYRNLIRFARRNNLSVSASPQDIGVLTRKLYAAFEALPGKVTLVNPQISPDLSEPNLT
                     FIYVPPGRANRSGWYLYNRAPNIESIISHQPLEYNRYLNKLVAWAWFNGLLTSRTRLY
                     IKGNGIVDLPKLQEMVADVSHHFPLRLPAPTPKALYSPCEIRHLAIIVNLEYDPTAAF
                     RNQVVHFDFRKLDVFSFGENQNCLVGSVDLLYRNSWNEVRTLHFNGEQSMIEALKTIL
                     GKMHQDAAPPDSVEVFCYSQHLRGLIRTRVQQLVSECIELRLSSTRQETGRFKALRVS
                     GQTWGLFFERLNVSVQKLENAIEFYGAISHNKLHGLSVQVETNHVKLPAVVDGFASEG
                     IIQFFFEETQDENGFNIYILDESNRVEVYHHCEGSKEELVRDVSRFYSSSHDRFTYGS
                     SFINFNLPQFYQIVKVDGREQVIPFRTKSIGNMPPANQDHDTPLLQQYFS"
     gene            complement(5830..6150)
                     /gene="cyaY"
                     /locus_tag="JNZ57_002571"
     CDS             complement(5830..6150)
                     /gene="cyaY"
                     /locus_tag="JNZ57_002571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000999950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HAY8828757.1"
                     /translation="MNDSEFHRLADQLWLTIEEHLDDWDGDSDIDCEINGGVLTITFE
                     NGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGET
                     VSFR"
     gene            6613..6816
                     /locus_tag="JNZ57_002572"
     CDS             6613..6816
                     /locus_tag="JNZ57_002572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY8828758.1"
                     /translation="MKNVFKVLTVLLTLFSLTGCGLKGPLYFPPADKNAPPPTKPVET
                     QTQSTVPDKNDRATGDGPSQVNY"
     gene            6853..7677
                     /gene="dapF"
                     /locus_tag="JNZ57_002573"
     CDS             6853..7677
                     /gene="dapF"
                     /locus_tag="JNZ57_002573"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HAY8828759.1"
                     /translation="MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQ
                     LLVIEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG
                     RMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHC
                     VIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACG
                     SGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL"
     gene            7674..8381
                     /locus_tag="JNZ57_002574"
     CDS             7674..8381
                     /locus_tag="JNZ57_002574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF484 domain-containing protein"
                     /protein_id="HAY8828760.1"
                     /translation="MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVP
                     HPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSL
                     DDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQ
                     HYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLH
                     EIALMLPELLERWIERV"
     gene            8378..9274
                     /gene="xerC"
                     /locus_tag="JNZ57_002575"
     CDS             8378..9274
                     /gene="xerC"
                     /locus_tag="JNZ57_002575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HAY8828761.1"
                     /translation="MTDLHTDVERYLRYLSVERQLSPITLLNYQRQLEAIINFASENG
                     LQSWQQCDVTMVRNFAVRSRRKGLGAASLALRLSALRSFFDWLVSQNELKANPAKGVS
                     APKAPRHLPKNIDVDDMNRLLDIDINDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHL
                     DLESGEVWVMGKGSKERRLPIGRNAVAWIEHWLDLRDLFGSEDDALFLSKLGKRISAR
                     NVQKRFAEWGIKQGLNNHVHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYT
                     HLDFQHLASVYDAAHPRAKRGK"
     gene            9274..9990
                     /gene="yigB"
                     /locus_tag="JNZ57_002576"
     CDS             9274..9990
                     /gene="yigB"
                     /locus_tag="JNZ57_002576"
                     /EC_number="3.1.3.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(5-phospho-D-ribitylamino)uracil
                     phosphatase YigB"
                     /protein_id="HAY8828762.1"
                     /translation="MRFYRPLGRISALTFDLDDTLYDNRPVILRTEREALTFVQNYHP
                     ALRSFQNEDLQRLRQAVREAEPEIYHDVTRWRFRSIEQAMLDAGLSAEEASAGAHAAM
                     INFAKWRSRIDVPQQTHDTLKQLAKKWPLVAITNGNAQPELFGLGDYFEFVLRAGPHG
                     RSKPFSDMYFLAAEKLNVPIGEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTW
                     DSRLLPHLEISRLASLTSLI"
     gene            10074..12236
                     /gene="uvrD"
                     /locus_tag="JNZ57_002577"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
     CDS             10074..12236
                     /gene="uvrD"
                     /locus_tag="JNZ57_002577"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HAY8828763.1"
                     /translation="MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIA
                     WLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHH
                     MDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ
                     SYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNIL
                     VDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAET
                     IRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVV
                     NRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDAL
                     SYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKAL
                     AGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIEN
                     LEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTMHSAKGLE
                     FPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKE
                     VYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFG
                     EGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLETV"
     gene            complement(12281..13183)
                     /locus_tag="JNZ57_002578"
     CDS             complement(12281..13183)
                     /locus_tag="JNZ57_002578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosyl-l-methionine hydroxide
                     adenosyltransferase family protein"
                     /protein_id="HAY8828764.1"
                     /translation="MKKTLATLFLLTCLGSSSAYADNALILQTDFSLKDGAVSAMKGV
                     AFGVDHNLKIFDLTHEIPPYNIWEGAYRLYQTASYWPQGSVFVSVVDPGVGTDRKSVV
                     LKTKNGQYFVSPDNGTLTLVAQTLGIDSVREIDEKANRLKGSEKSYTFHGRDVYAYTG
                     ARLASGAITFEQVGPELPAKVVELSYQKAKATKGEVKGNIPILDIQYGNVWSNISDEL
                     LNQAEIKLNDTLCVTISEGSQQKYAGKMPYVASFGDVPEGQPMVYLNSLLNVSVALNM
                     DNFAQKHQVASGADWNIDVKKCAK"
BASE COUNT         2992 a         3458 c         3618 g         3146 t
ORIGIN      
        1 gcaggtgcag gtgcaggcgc aggtgcaggt ttagcttccg ttgtccctgc tgccggttgt
       61 gccagcaggt tacgcacgcg agtctgcatc agtttttcca gcatcgcctg gctttgcagg
      121 gtttccggaa gatccatcga gatattttgc tggcttaact ggtccacctc gtcgaggaac
      181 gctttggtgg tggcatcatc agtatcgtag taagcacgta cccaggtgga gacgttctcc
      241 agcgcctggc gataagtctc ttcctggtga cgcggtacag cttgtgctgc gaccagcagg
      301 cgagagcgaa tattttcgcg cagatagata tcctgatttg gcgctaacag cggtacggcg
      361 gtgtcatcac gacggcgaat cgtaatgaag ttgtccataa agttctgcca gcttttttgc
      421 agattgatac gccattcgct gatggaactg gaaagctctt caccgtcgga atccatcggc
      481 gaaccatcgc tgtcattatc ggccagacgc aggttatcta cctgatttga aagctgatta
      541 agcttaagga tgatgccgtc ataatccacc tgcgaaactg cagaaaggct ggcgatatca
      601 tcggtaattg cccgacgaac ggtaatcaga ctcgggtcat tcatatccgc caggctggca
      661 tctgcacttt tcagcaacgc tgcagcggtc gtgacgtcct gatcgctcca cagcttccgt
      721 ccggcgagtt tcaccagaaa atcggcctga gccagcagcc aggttttagc atcgctgccg
      781 gaaatggtgg cgaccttttg ttggacttca tccaactgtt ttgccagcgt ttcttgctga
      841 cgattcgcct gcttaagctg tgcagcttgt tgcttaataa tgccttccag ctcggctttt
      901 tggctctcct gggctttttg caatgccgtc agttggttag ccagggcatc gctggtggcg
      961 gtctgattga cggcctgttg tttaccccag ccatacaaac cgacgcccgc cgccagagca
     1021 atagcgatag ccaccgcgct gagaatcaat gcggtattgt tcttactctt tttttctgtt
     1081 gcgacaggtt gtgacgtggt gtccacggcc tccctggtct cttcaaccac ggcggaggtt
     1141 ttttcttgtt ccgtcattat ggcttcctgt tatgagagtt attgtaatgc ccgtaaaagc
     1201 gcatcgttgt cagcgttatc ggcgacctta atgtcttgcc agcccagttc ccgggcgagt
     1261 ttcgccaaac gctcactgac gaccaatagt cgacagcgta gtaaccagtg ctcacgatac
     1321 cattgtggga tcagcgacca gagttgctgc aacatttcac cgctggtaac aacgaccatc
     1381 gtcacctcgc gggattgcca gcgcatcgct tcttctgcac catcgtaatg gattgcgcat
     1441 cgttgataac atttacaaaa agtgacctca gcaccgcgcg ctgtcagggt atccccaatt
     1501 agctcacgac cgccattgcc acgtaatatc agcgcacgtt tgcccgcaat attttgtaat
     1561 tcaggtaatt gtagcaagac ttcgctgatt tcccgatcct gcgggtagag aatcttctgt
     1621 ccgcttacgg tatgtagcgc cagtgcggtg gtgcgtccaa tggcgaaata atcaggtagt
     1681 cggggccatt tacgatcttg ctgatgcagc tgtgattggg caaaagcaac cgcgtgttgc
     1741 gagagggcaa acaacagatc gctctccccc agcgccgcca gttgatcagc aagttgtggt
     1801 aattgtcgac ccggagaaaa ctcaatcagc ggaaaatgcc aggccacctg ccccagtgtg
     1861 cgcagacggc tcactaactc ttctccagcg ggagacgggc gggtgaccag gatactcatg
     1921 ccggggcgtc tccgttatag acttcagcga ggatctcgcg cgcgccgtta ttcagtagct
     1981 cttctgccag cgaaatcccc atttgttcgg catcttgcgg cgcaccgcgg cgttcaccgc
     2041 gaataatctg cgaaccgtcc ggcgcgccga ccagcgcacg cagccagatt tcaccatcaa
     2101 taagctcggc gtagctacca attggcacct gacatccgcc ttcgagacgg gtattcatgg
     2161 cgcgttctgc ggtaacgcgc agtgcagttt cgtggtgatt cagcgcggca agcagctcgc
     2221 gagtgcgtgc atcatcaagg cggcattcaa taccgaccgc accttgtcct accgctggaa
     2281 gagaaatctc gggtggtaac gcggcgcgaa tgcgggactc cagacctaaa cgttttagtc
     2341 cggctacagc aagaatgatg gcatcgtatt cgccgttatc tagtttgctc aggcgagtgc
     2401 cgacgttgcc gcgcagggag cggataatca gatccgggcg gcgttcagcc agttggcact
     2461 ggcgacgtaa actggacgtc ccgacgatac tgcctgctgg taacgcatcc agactgtcat
     2521 agttattgga cacaaaggca tcgcgaggat cttcacgctc acaaatagtg accagtccca
     2581 gaccttgcgg gaattcaacc ggcacatctt tcattgaatg tacggcgata tcggcgcgat
     2641 tttcgaggag cgcgacttcc agctctttta caaataagcc ttttccgcct actttcgcca
     2701 gcggcgtatc aagaatcaca tcgccgcgcg tcaccatcgg taccagttca acgaccaggc
     2761 ccggatggct cgtcatcaac ttgtctttga catagtgtgc ctgccagagt gcaagtgggc
     2821 tttggcgtgt ggcaattctt aaaacattgt ctaacatgct tgttaccgtc attatcatcc
     2881 gtggtccatc ctaacatcct tgccagagtg atgtcagtgt tgtggtgaaa cgtagacgcc
     2941 tgcgcaaacc gtaaaatgag gtctggcagt ggatcctgac aggcgtttca cgccgtcgta
     3001 ataaggaatt tacagagaat aaacggtgct acacttgtat gtagcgcatc tttctttacg
     3061 gtcaattagc aaggtgttaa attgatcacg ttttagacca ttttttcgtc gtgaaactaa
     3121 aaaaaccagg cgcgaaaagt ggtaacggtt acctttgaca tacgaaatat cccgaatgcc
     3181 gcgtgttacc gttgatgttg gcggaatcac agtcatgacg ggtagcaaat caggcgatac
     3241 gtcttgtacc tctatattga gactctgaaa cagagactgg atgccataaa tcaattgcgt
     3301 gtggatcgcg cgcttgctgc tatggggcct gcattccaac aggtctacag tctactgccg
     3361 acattgttgc actatcacca tccgctaatg ccgggttacc ttgatggtaa cgttcccaaa
     3421 ggcatttgcc tttacacgcc tgatgaaact caacgccact acctgaacga gcttgaactg
     3481 tatcgtggaa tgtcagtaca ggatccaccg aaaggtgagc ttccaattac tggtgtatac
     3541 accatgggca gcacctcgtc cgtagggcaa agttgttcct ctgacttgga tatctgggtc
     3601 tgtcatcaat cctggctcga tagcgaagag cgccagttac tacaacgtaa atgtagtctg
     3661 ctggaaagct gggccgcctc gctgggtgtg gaagtcagct tcttcctgat tgatgaaaac
     3721 cgcttccgtc ataatgaaag cggcagcctg gggggcgaag attgtggctc cacccagcat
     3781 atactgctgc ttgacgaatt ttatcgtacc gccgtgcgtc tcgccggtaa gcgtattctg
     3841 tggaatatgg tgccgtgcga cgaagaagag cattacgacg actatgtgat gacgctttac
     3901 gcgcagggcg tgctgacgcc aaatgaatgg ctggatctcg gtggcttaag ctcgctttct
     3961 gctgaagagt actttggtgc cagcctttgg cagctctaca agagtatcga ttccccatac
     4021 aaagcggtac tgaaaacact gctgctggaa gcctattcct gggaataccc gaacccacgt
     4081 ctgctggcga aagatatcaa acagcgtttg cacgacggtg agattgtatc gtttggtctc
     4141 gatccatact gcatgatgct ggagcgtgtt actgaatacc tgacggcgat tgaagatttt
     4201 acccgtctgg atttagtacg tcgctgcttc tatttaaaag tgtgcgaaaa gctcagccgt
     4261 gaacgcgcct gcgtaggctg gcgtcgcgca gtgttgagcc agttagtgag cgagtggggt
     4321 tgggacgaag ctcgtctggc aatgctcgat aaccgcgcta actggaagat tgatcaggtg
     4381 cgtgaggcgc acaacgagtt gctcgacgcg atgatgcaga gctaccgtaa tctgatccgc
     4441 tttgcgcgtc gcaataacct tagcgtctcc gccagtccgc aggatatcgg cgtgctgacg
     4501 cgtaagctgt atgccgcgtt tgaagcatta ccaggtaaag tgacgctggt aaacccgcag
     4561 atttcacccg atctctcgga accgaatctg acctttattt atgtgccgcc gggccgtgct
     4621 aaccgttcag gttggtatct gtataaccgc gcgccaaata ttgagtcgat catcagccat
     4681 cagccgctgg aatataaccg ttacctgaac aaactggtgg cgtgggcatg gtttaacggc
     4741 ctgctgacct cgcgcacccg tttgtatatt aaaggtaacg gcattgtcga tttgcctaag
     4801 ttgcaggaga tggtcgccga cgtgtcgcac catttcccgc tgcgcttacc tgcaccgaca
     4861 ccgaaggcgc tctacagccc gtgtgagatc cgccatctgg cgattatcgt taacctggaa
     4921 tatgacccga cagcggcgtt ccgcaatcag gtggtgcatt ttgatttccg taagctggat
     4981 gtcttcagct ttggcgagaa tcaaaattgc ctggtaggta gcgttgacct gctgtaccgc
     5041 aactcgtgga acgaagtgcg tacgctgcac ttcaacggcg agcaatcgat gatcgaagcc
     5101 ctgaaaacta ttctcggcaa aatgcatcag gacgccgcac cgccagatag cgtggaagtc
     5161 ttctgttata gccagcatct gcgcgggtta atccgtactc gcgtgcagca actggtttct
     5221 gagtgtattg aactgcgcct ttccagcacc cgccaggaaa ccgggcgttt caaggcgctg
     5281 cgcgtttctg gtcaaacctg gggcttgttc ttcgaacgcc tgaatgtatc ggtacagaag
     5341 ctggagaacg ccatcgagtt ttatggcgct atttcgcata acaaactgca cggcctgtca
     5401 gtgcaggttg aaaccaatca cgtcaaatta ccggcggtgg tggacggctt tgctagtgaa
     5461 gggatcatcc agttcttctt cgaagaaacg caagacgaga atggctttaa tatctacatt
     5521 cttgacgaaa gcaaccgggt tgaggtgtat caccactgcg aaggcagcaa agaggaactg
     5581 gtgcgtgacg tcagtcgctt ctactcgtca tcgcacgacc gcttcaccta cggctcaagc
     5641 ttcatcaact tcaacctgcc gcagttctat cagattgtga aggttgatgg tcgtgaacag
     5701 gtgattccgt tccgcacaaa atctatcggt aacatgccgc ctgccaatca ggatcacgat
     5761 acgccgctat tacagcaata tttttcgtga tgaacgtgcc ggaaagcgag gcttatccgg
     5821 catgcaatct tagcggaaac tgactgtttc acccgcctgc tgcgtcgccg cctgttccag
     5881 caaatcccag aaggtttcgc cgctgcgatc gcaaatccac tcatcgcctt tcagatcaaa
     5941 atggtagccg ccttgtttgg ttgccagcca tacctggtgc agcggttcct ggcggttgat
     6001 aatgattttg ctgccgtttt caaaggtaat ggtcagcacg ccgccgttga tttcgcagtc
     6061 gatatcgctg tcgccatccc agtcgtccag atgctcttca atggtcagcc acagttgatc
     6121 agccaggcga tgaaattcac tgtcgttcat tgttgtatcc tgtttttaag tgatggcggc
     6181 agtatagcgg catggggtca gggcttcaaa gtttgcacct ctgctgctgc gttccggcat
     6241 gattcatccg tcaccggaat aatgatgtct ctgtgtggcg aaagatttgt ctcttcatta
     6301 gggcgcagtt acaccacgcc tttccctgtt tctggtaaac attatgatca ggtttaccga
     6361 gcgagcatcc tcacgctgac ggaactaaaa aagccaacaa acaaaccaca ttgcgatagt
     6421 gcataaagcc atcctggcgc gaggtgccga tcacgaaact gccagcagaa cataaatcct
     6481 cacgagtaag cgttatactc gcagcatttc ctcacttttc agacttcata aagagtcgct
     6541 aaacgcttgc ttttacgcct tctcctgcga tgatagaaag cagaaagcga tgaactttac
     6601 aggcaatcca taatgaaaaa cgtgtttaag gtactcactg tattacttac tctcttcagc
     6661 ctgacgggct gcggtctgaa aggtccgctc tatttcccgc ctgcagataa aaatgcaccg
     6721 ccgccgacca aaccggtaga gacgcaaacg caatccacgg tgccggataa aaacgatcgc
     6781 gccactggcg atggtccatc ccaggtgaat tactaaaagt cagtttctgt acccgcgtga
     6841 ttggagtaaa tgatgcagtt ctcgaaaatg catggccttg gcaacgattt tatggtcgtc
     6901 gacgcggtaa cgcagaatgt ctttttttca ccggagctga ttcgtcggct ggcggatcgg
     6961 cacctggggg tagggtttga ccagctgctg gtgattgagc cgccgtatga tcctgaactg
     7021 gattttcact atcgcatttt caatgctgat ggcagtgaag tggcgcagtg cggcaacggt
     7081 gcgcgctgct ttgcccgttt tgtgcgcctg aaagggctga ccaataagcg cgatatccgc
     7141 gtcagcaccg ccaacgggcg gatggttctg accgtcaccg atgatgatct ggtccgcgta
     7201 aatatgggcg aacccaactt cgaaccttcc gctgtgccgt ttcgcgctaa caaagcggaa
     7261 aagacctata ttatgcgcgc cgccgagcag acaatcttat gcggcgtggt gtcgatggga
     7321 aatccgcatt gcgtgattca ggtcgatgat gtcgataccg cggcggtaga aacgcttggt
     7381 cctgttctgg aaagccacga gcgttttccg gagcgcgcca atatcggttt tatgcaagtg
     7441 gttaagcgcg agcatattcg tttacgcgtt tatgagcgtg gggcaggaga aacccaggcc
     7501 tgcggcagcg gcgcgtgtgc ggcggttgca gtagggattc agcaaggttt gctggccgaa
     7561 gaagtacgcg tggaactccc cggcggtcgt cttgatatcg cctggaaagg tccgggtcac
     7621 ccgttatata tgactggccc ggcggtacat gtctatgacg gatttattca tctatgaagc
     7681 aaccagggga agaactgcag gaaacactca cggagcttga tgaccgggcg gttgtcgatt
     7741 atctgattaa aaatcctgag ttttttatcc gtaatgcgcg cgcagtagaa gcgatacgtg
     7801 tgccgcatcc ggtacgcggc accgtttcgt tggtcgagtg gcacatggcc cgcgcacgta
     7861 atcatattca tgttctggaa gagaacatgg cgctgttgat ggaacaggct atcgccaacg
     7921 aaggcctgtt ttatcgccta ctctacctgc agcgcagtct caccgccgcc agcagtctcg
     7981 acgatatgct gatgcgcttt caccgctggg cgcgcgatct cggcctggca ggtgcgagtc
     8041 tgcgcctgtt tccggatcgc tggcgcttag gtgcgccgtc gaaccacact catctggcat
     8101 taagccgtca gtctttcgaa ccgctgcgta ttcagcgttt ggggcaggaa cagcactatc
     8161 ttgggccgct taacggacca gagctgctgg tggtgctacc ggaagcgaaa gcggtgggat
     8221 cggtggcgat gtcgatgctg ggaagcgatg ctgatttggg tgtcgtgctg tttaccagtc
     8281 gcgatgccag tcactatcaa caagggcaag gaacgcagtt acttcatgaa attgcgctga
     8341 tgttgccgga gcttctggag cgttggattg aacgcgtatg accgatttac acaccgatgt
     8401 agaacgctac ctacgttatc tgagcgtgga gcgccagctt agcccgataa ccctgcttaa
     8461 ctaccagcgt cagcttgagg cgatcatcaa ttttgccagc gaaaacggcc tgcaaagctg
     8521 gcagcaatgt gatgtgacga tggtgcgcaa ttttgctgta cgcagtcgcc gtaaagggct
     8581 gggagcagca agtctggcgt tacggctttc tgcgctacgt agcttttttg actggctggt
     8641 cagccagaac gaactcaaag ctaacccggc gaaaggtgtt tcggcaccga aagcgccgcg
     8701 tcatctgccg aaaaatatcg acgtcgacga tatgaatcgg ctgctggata ttgatatcaa
     8761 cgatcccctc gctgtacgcg accgtgcaat gctggaagtg atgtacggcg ctggtctgcg
     8821 tctttccgag ctggtggggc tggatatcaa acacctcgac ctggagtctg gtgaagtgtg
     8881 ggtaatgggg aaaggcagca aagagcgccg cctgccgatt ggtcgcaacg ctgtggcgtg
     8941 gattgagcac tggcttgatt tgcgcgacct gtttggtagc gaagacgacg cgctttttct
     9001 gtcgaaactg ggcaagcgta tctccgcgcg taatgtgcag aaacgctttg ccgaatgggg
     9061 cataaaacaa gggctgaata atcacgttca cccacataaa ttacgtcact cgttcgctac
     9121 gcatatgctg gagtcgagcg gcgatcttcg tggtgtgcag gagctactgg gtcatgccaa
     9181 cctctccacc acgcaaatct atactcatct tgattttcaa caccttgcct cggtgtacga
     9241 tgcggcgcat ccacgcgcca aacgggggaa ataatgcgtt tttaccggcc tttggggcgc
     9301 atctcggcgc tcacctttga cctggatgat accctttacg ataaccgtcc ggtgattttg
     9361 cgcaccgagc gagaggcgct tacctttgtg caaaattatc atccggcgct gcgcagcttc
     9421 cagaatgaag atctgcaacg cctgcgccag gcggtacggg aagcggaacc cgagatttat
     9481 cacgacgtga cgcgctggcg ttttcgttcg attgaacaag cgatgctcga cgccgggctg
     9541 agtgccgaag aagccagtgc aggcgcacac gcagcaatga tcaactttgc caaatggcgc
     9601 agccgaatcg acgtcccgca gcaaactcac gacaccttaa aacagctggc gaagaaatgg
     9661 ccgctggtgg cgatcaccaa cggtaacgcc cagccggaac tgtttggttt gggggattat
     9721 tttgagtttg tgctgcgcgc tggcccgcac gggcgctcaa aaccgttcag cgatatgtac
     9781 tttctggctg cggaaaaact caacgtgccg atcggcgaga tcttacatgt tggggacgat
     9841 ctcaccactg acgtgggtgg ggcaattcgc agcggaatgc aggcctgttg gatcagaccg
     9901 gaaaatggcg atctgatgca aacctgggac agccgtttac tgccgcatct ggaaatttcc
     9961 cggttggcat ctctgacctc gctgatataa tcagcaaatc tgtatatata cccagctttt
    10021 tggcggaggg cgttgcgctt ctccgcccaa cctattttta cgcggcggtg ccaatggacg
    10081 tttcttacct gctcgacagc cttaatgaca aacagcgcga agcggtggcc gcgccacgca
    10141 gcaaccttct ggtgctggcg ggcgcgggca gtggtaagac gcgcgtactg gtgcatcgta
    10201 tcgcctggct gatgagcgtg gaaaactgct cgccatactc gattatggcg gtgacgttta
    10261 ccaacaaagc ggcggcggag atgcgtcatc gtatcgggca gctaatgggc accagccagg
    10321 gcggcatgtg ggtcggcacc ttccacgggc tggcgcaccg tctgctgcgt gcgcaccata
    10381 tggacgccaa tctgccgcag gattttcaga tcctcgacag cgaggaccag ctacgcctgc
    10441 tcaaacgcct aatcaaggcg atgaacctcg acgagaagca gtggccgccg cgccaggcaa
    10501 tgtggtacat caacagccag aaagatgaag gcctgcgtcc acatcatatt caaagctacg
    10561 gtaatccggt ggagcagacc tggcagaagg tgtatcaggc gtatcaggaa gcgtgtgacc
    10621 gcgcgggcct ggtggacttc gccgagctgc tgctgcgcgc tcacgagttg tggcttaaca
    10681 agccgcatat cctgcaacac taccgcgaac gttttaccaa tatcctggtg gacgaattcc
    10741 aggataccaa caacattcag tacgcgtgga tccgcctgct ggcgggcgac accggcaaag
    10801 tgatgatcgt cggtgatgac gaccagtcaa tctacggctg gcgcggggcg caggtggaga
    10861 atattcagcg tttccttaat gatttccccg gtgccgaaac tattcgtctg gagcaaaact
    10921 accgctctac cagcaatatt ctgagcgccg ctaacgccct gattgaaaac aataacgggc
    10981 gtctgggtaa aaaactgtgg accgatggcg cggacggtga gcctatttcc ctctattgcg
    11041 cttttaacga actcgatgaa gcgcgttttg tggttaaccg catcaaaacc tggcaggaca
    11101 acggcggggc gcttgccgag tgcgccattc tctaccgcag taacgcccag tcgcgtgtgc
    11161 tggaagaagc actgttgcag gcgagtatgc cgtaccgtat ttacggcggg atgcgcttct
    11221 tcgaacgcca ggaaatcaaa gatgcgctct cgtatctgcg cctgattgcc aaccgtaacg
    11281 acgacgcggc ctttgagcgt gtggtgaata cgccaacgcg gggtattggt gaccggacgc
    11341 tggacgtggt acgtcagaca tcgcgcgatc gccagttaac actctggcag gcatgtcgtg
    11401 aactgttgca ggaaaaagcc ctcgccggac gtgctgccag cgccttacag cggtttatgg
    11461 aactgatcga cgccttagcg caggaaactg ccgatatgcc gctgcatgta cagactgacc
    11521 gggtaattaa agactccggc ctgcgtacca tgtacgagca ggagaagggc gaaaaaggtc
    11581 agacgcgtat cgaaaactta gaggaactgg tgacggcaac gcgccagttc agctacaacg
    11641 aagaagacga agatttaatg ccgctgcagg cgttcctatc ccatgcggcg ctggaagcag
    11701 gcgaagggca ggcggatacc tggcaggatg cggtacaact gatgaccatg cactcggcga
    11761 aaggtctgga gttcccgcag gtgtttatcg tcggtatgga agagggcatg ttcccaagcc
    11821 agatgtcgct ggatgaaggc gggcgtctgg aagaagaacg ccgtctggcc tacgttggcg
    11881 taacccgcgc gatgcagaaa ctgacgctga cctacgcgga aactcgccgt ctgtatggca
    11941 aagaggttta ccatcgcccg tcgcgcttta ttggcgagct gccggaagag tgtgtggaag
    12001 aggtgcgcct gcgcgccacg gtaagccgcc cggtcagcca tcagcggatg ggtacgccga
    12061 tggtcgagaa cgacagcggc tacaagctcg gccagcgtgt acgccacgct aagtttggtg
    12121 aaggcaccat cgtcaatatg gaaggcagcg gtgaacatag ccgtttgcag gtggcattcc
    12181 agggccaggg tattaaatgg ctggtggcgg cttatgcccg gttggagacg gtgtgacgtt
    12241 gcgggatgcg gtgcgccaca ccgcattccg catcagcacc ttacttagcg cacttcttca
    12301 catcaatatt ccagtcagca ccagacgcaa cctgatgttt ctgcgcgaaa ttatccatat
    12361 tcagcgccac ggaaacattc aataagctgt tcagatacac catcggctgg ccttccggca
    12421 catcgccgaa gcttgcgaca tacggcattt tccctgcgta tttttgctgg gaaccttcgg
    12481 aaatggtcac acacaacgtg tcgttgagtt tgatttctgc ctgattcagc aactcgtcgc
    12541 tgatattgct ccagacgttg ccgtactgaa tatcgagaat cgggatattg cccttcactt
    12601 caccttttgt tgcttttgct ttctgataag aaagttcgac aacttttgct ggaagctctg
    12661 gccccacctg ttcgaacgta atcgccccgg aagccagacg tgcaccggtg taggcataca
    12721 cgtcacgacc gtggaaggta tatgactttt cagaaccttt caggcggtta gctttttcgt
    12781 cgatttcccg gacgctatca atacccagag tttgtgccac caaagtgagc gtaccgttat
    12841 ctggtgaaac gaagtattga ccgtttttgg ttttcagcac taccgattta cggtcagtgc
    12901 ctacgcccgg atcgaccacg ctaacaaaca ccgaaccttg cggccagtaa ctggcagtct
    12961 gatacaggcg ataagcgcct tcccagatgt tatacggtgg aatttcgtgt gttaaatcaa
    13021 agattttaag attatggtca acgccgaatg cgaccccttt catcgccgag acggcaccat
    13081 ctttcaggct aaaatcagtt tgtaaaatca aagcgttatc cgcataggcg gatgatgatc
    13141 ccagacacgt taataaaaat aacgttgcga gcgttttttt catttttggg taatgactcc
    13201 aacttattga tagt
//
LOCUS       DADMHC010000110        13163 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.110, whole genome shotgun sequence.
ACCESSION   DADMHC010000110 DADMHC010000000
VERSION     DADMHC010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13163)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13163)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13163
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.110"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            281..1834
                     /locus_tag="JNZ57_002579"
     CDS             281..1834
                     /locus_tag="JNZ57_002579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000807159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HAY8828765.1"
                     /translation="MSEFARCHYGYIQIPPVTTFRADGPETPEEEKGYWFHAYQPEDL
                     CTIHNPMGDLQDFIALVKDAKKFGIDIIPDYTFNFMGIGGSGKNDLDYPSADIRAKIS
                     KDIESGIPGYWQGQVLIPFIKDPVTKERKQIHPEDIHLTAKDFEASKDNISKDEWENL
                     HALKEKRLNGMPKTTPKSGQVIMLQNQYVREMRKYGVRGLRYDAAKHSKHEQIERSIT
                     PPLKNYNERLHNTNLFNPKYQKKAVMNYMEYLVTCQLDEQQMSSLLYERDDLSAIDFS
                     LLMKTIKAFSFGGDLQTLASKPGSTISSIPSERRILININHDFPNNGNLFNGFLFNHQ
                     QDEQLAMAYMAALPFSRPLVYWDGQVLKSTTESKNYDGSTRVGGEAWLNKGCSTYQQL
                     YNEFHALYIDKAGIWSAFEGVFATKNVLAFSRGDSVNINHSPHDGLVIINKGNEEVEG
                     TWPNKLQPGIYKNMGSNSVNIIINNTRKIIPPGKVFTLRGGTLNINIPGRSALLLGKT
                     GEPPNYLYL"
     gene            2170..3147
                     /gene="csiD"
                     /locus_tag="JNZ57_002580"
     CDS             2170..3147
                     /gene="csiD"
                     /locus_tag="JNZ57_002580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311547.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation induced protein CsiD"
                     /protein_id="HAY8828766.1"
                     /translation="MNALIAVQNNAVDSGQDYSGFTLIPSAQSPRLLELTFTEQTTKQ
                     FLEQVAEWPVQALEYKSFLRFRVGKILDDLCANQLQPLLLKPLLNRAEGALLINAVGI
                     DDVAQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELH
                     NDGTYVEEITDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDHYFRHPLARRPMRFAAPP
                     SKNVSKDVFHPVFDVDQQGRPVMRYIDQFVQPKDFEEGVWLSELSDAIETSKGILSVP
                     VPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYATHHYQTHQ"
     gene            3167..4435
                     /gene="lhgO"
                     /locus_tag="JNZ57_002581"
     CDS             3167..4435
                     /gene="lhgO"
                     /locus_tag="JNZ57_002581"
                     /EC_number="1.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417146.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-2-hydroxyglutarate oxidase"
                     /protein_id="HAY8828767.1"
                     /translation="MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESGPACHQTG
                     HNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNDIRYDNCGKMLIATSDLEMERM
                     RALWERTAANGIEREWLNAEELREREPNITGLGGIFVPSSGIVSYREVTAAMAKIFQA
                     RGGEIIYNAEVSALSEHKNGVVVRTRQGGEYEASTLISCSGLMANRLVKMLGLEPGFI
                     ICPFRGEYFRLAPEHNQIVNHLIYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKR
                     EGYRKRDFSFSDTLEILGSSGIRRVLQNHLRSGLGEMKNSLCKSGYLRLVQKYCPRLS
                     LSDLQPWPAGVRAQAVSPDGKLIDDFLFVTTPRTIHTCNAPSPAATSAIPIGAHIVSK
                     VQTLLASQSNPGRTLRATRSVDALHAAFNQ"
     gene            4458..5893
                     /gene="gabD"
                     /locus_tag="JNZ57_002582"
                     /pseudo
     CDS             4458..5893
                     /gene="gabD"
                     /locus_tag="JNZ57_002582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311549.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent succinate-semialdehyde
                     dehydrogenase"
     gene            5907..7173
                     /gene="gabT"
                     /locus_tag="JNZ57_002583"
                     /pseudo
     CDS             5907..7173
                     /gene="gabT"
                     /locus_tag="JNZ57_002583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417148.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4-aminobutyrate--2-oxoglutarate transaminase"
     gene            7411..8811
                     /gene="gabP"
                     /locus_tag="JNZ57_002584"
     CDS             7411..8811
                     /gene="gabP"
                     /locus_tag="JNZ57_002584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GABA permease"
                     /protein_id="HAY8828768.1"
                     /translation="MGQSSQPHELGGGLKSRHVTMLSIAGVIGASLFVGSSVAIAEAG
                     PAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFW
                     VLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKV
                     IAILAFIFLGAVAISGFYPYAEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAE
                     IVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVALIPWNMPGLKAVGSYRSV
                     LELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTP
                     YVAVLLSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAE
                     GSEIRLRMWLYPWLTWLVIGFITFVLVVMLFRPAQQLEVISTDLLAIGIICTVPIMAR
                     WNKLIMWQKTPVHNTR"
     gene            8832..9494
                     /gene="csiR"
                     /locus_tag="JNZ57_002585"
     CDS             8832..9494
                     /gene="csiR"
                     /locus_tag="JNZ57_002585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311552.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CsiR"
                     /protein_id="HAY8828769.1"
                     /translation="MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLR
                     EALSQLVAERLVTVVNQKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGSDEWEA
                     EVLAKAHLLSKLEACDASEKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAAR
                     YRFIWLRRTVLSVEMLEDKHDQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMA
                     GN"
     gene            complement(9495..9944)
                     /gene="kbp"
                     /locus_tag="JNZ57_002586"
     CDS             complement(9495..9944)
                     /gene="kbp"
                     /locus_tag="JNZ57_002586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium binding protein Kbp"
                     /protein_id="HAY8828770.1"
                     /translation="MGLFNFVKDAGEKLWDAVTGQHDKDDQAKKVQEHLSKTGIPDAD
                     KVNIQIADGKATVTGDGLSQEAKEKILVAVGNISGIASVDDQVKTATPATASQFYTVK
                     SGDTLSAISKQVYGNANLYNKIFEANKPMLKSPDKIYPGQVLRIPEE"
     gene            complement(10028..10186)
                     /locus_tag="JNZ57_002587"
     CDS             complement(10028..10186)
                     /locus_tag="JNZ57_002587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaE/Pmp3 family membrane protein"
                     /protein_id="HAY8828771.1"
                     /translation="MGFWRIVITIILPPLGVLLGKGFGWAFIINILLTLLGYIPGLIH
                     AFWVQTRD"
     gene            10369..10668
                     /locus_tag="JNZ57_002588"
     CDS             10369..10668
                     /locus_tag="JNZ57_002588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY8828772.1"
                     /translation="MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGEL
                     TRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP"
     gene            10678..11202
                     /gene="ygaP"
                     /locus_tag="JNZ57_002589"
     CDS             10678..11202
                     /gene="ygaP"
                     /locus_tag="JNZ57_002589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase YgaP"
                     /protein_id="HAY8828773.1"
                     /translation="MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLS
                     VLEQSGLPPKLRREQIIFHCQAGKRTSNNADKLAAIAAPAEIFLLEDGIDGWKRAGLP
                     VAVNKSQPLPLMRQVQIAAGGLILIGVVLGYTVNSGFFLLSGFVGAGLLFAGISGFCG
                     MARLLDKMPWNQRA"
     gene            complement(11249..11653)
                     /gene="stpA"
                     /locus_tag="JNZ57_002590"
     CDS             complement(11249..11653)
                     /gene="stpA"
                     /locus_tag="JNZ57_002590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein StpA"
                     /protein_id="HAY8828774.1"
                     /translation="MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEE
                     EQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDV
                     NGETKTWTGQGRTPKPIAQALAEGKSLDDFLI"
     gene            12306..12755
                     /gene="alaE"
                     /locus_tag="JNZ57_002591"
     CDS             12306..12755
                     /gene="alaE"
                     /locus_tag="JNZ57_002591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-alanine exporter AlaE"
                     /protein_id="HAY8828775.1"
                     /translation="MFSPQSRLRHAVADTFAMVVYCSVVNMCIEVFLSGMSFEQSFYS
                     RLVAIPVNILIAWPYGMYRDLFMRAARKVSPSGWIKNLADILAYVTFQSPVYVAILLV
                     VGADWHQIMAAVSSNIVVSMLMGAVYGYFLDYCRRLFKVSRYQQVKA"
     gene            complement(12792..13136)
                     /locus_tag="JNZ57_002592"
     CDS             complement(12792..13136)
                     /locus_tag="JNZ57_002592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgaC family protein"
                     /protein_id="HAY8828776.1"
                     /translation="MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARM
                     GRTALVIHPTLKERSSTLAEPASDIKTCDHYQQFPLYLAGERHEHYGIPHGFSSRVAL
                     ERYLNGLFGEAS"
BASE COUNT         3297 a         3222 c         3345 g         3299 t
ORIGIN      
        1 agtattaaga ctatcactta tttaagtgat actggttgtc tggagattca gggggccagt
       61 ctagctggca gccgatgtat ataatattaa cgtgacgtca ccttccggac agcaagaaac
      121 atttaaaata ctaatcaatc cagaacatct acggcaaaca cttgagcgta aatctcttac
      181 tgctgttcag aaatcacaat gtgaaatcat tacccccaaa aaacctggcg aagcgattct
      241 tcatgctttt aatgccacct accagcaaat cagggaaaat atgtctgagt ttgcacgttg
      301 ccattatggg tatatacaaa tccctccagt gacaactttc cgcgccgacg gaccagaaac
      361 tcccgaagaa gaaaaaggtt actggtttca tgcttatcaa cccgaagatc tttgtaccat
      421 ccataaccca atgggagatt tgcaggattt tatcgcattg gttaaagatg ctaaaaaatt
      481 tggtatcgat atcattcctg attatacatt taactttatg ggaatcgggg gtagtggtaa
      541 aaatgacctg gattatccct ctgctgatat acgagcgaag atcagtaaag atatagaaag
      601 cggtatccct ggctattggc aaggtcaggt tttgattcca ttcattaaag atccagtaac
      661 aaaagaacgt aaacaaatcc atccagaaga tatacatctc actgcaaaag acttcgaagc
      721 aagtaaagat aacatctcta aggatgaatg ggaaaacctc catgcattaa aagaaaagcg
      781 tttaaatgga atgcctaaaa caacacccaa aagtggccag gttattatgt tgcaaaatca
      841 atacgttcga gaaatgcgaa aatatggcgt acgaggttta cgttatgatg cggcaaaaca
      901 ctcaaaacat gaacaaatag agaggtcgat aaccccaccg cttaaaaatt ataatgagcg
      961 gttacacaat actaatttat ttaacccaaa atatcaaaaa aaagccgtta tgaattacat
     1021 ggaatacctg gtaacttgtc agttggatga acaacaaatg tcatcactgc tttatgagag
     1081 agatgattta agtgccattg atttttcttt actcatgaaa acgataaaag ccttttcatt
     1141 tggtggagat ctccaaaccc ttgcatcaaa accgggttcc acaatctcaa gtatcccatc
     1201 agaaagacgg atattgatta acattaacca cgattttcct aacaatggta atcttttcaa
     1261 tggctttcta tttaaccatc aacaagatga acaattagca atggcatata tggccgctct
     1321 cccgttcagc agacctttag tttactggga tggccaagta ttaaaatcaa cgactgaaag
     1381 taaaaattat gatgggtcca cgcgtgtcgg cggtgaggcg tggcttaata aaggttgctc
     1441 tacctatcag cagctctaca atgaattcca cgcattatat atagataaag caggaatatg
     1501 gagcgcattt gagggtgtat ttgcaactaa aaacgttctg gcctttagtc gtggggattc
     1561 tgtgaacatt aatcactctc ctcatgatgg actagttata ataaataaag gaaacgaaga
     1621 agttgaaggt acctggccta acaaattgca acctggaata tacaaaaaca tggggagtaa
     1681 tagcgttaat attattatta ataatacccg aaaaattatc ccccctggta aagtatttac
     1741 gcttagaggc ggaactctaa atatcaatat tcctgggcgt agcgctcttc ttttagggaa
     1801 aacaggagaa ccgccgaact atctctattt ataatttaat gttatatctg ccccgataaa
     1861 acggggcaga taatatgttt agtttactaa cggtcatttt gcagtgaagc catttactgt
     1921 tttttatcga ccagataatc tgttctctaa tgttaactcc ccctaacctg ttgctttagt
     1981 tattcatttc ctgtctcact ttgccttaat accctacgtt aaatgttact aatttgttgt
     2041 ttttgatcac aataagaaaa caatatgtcg cttttgtgcg catttttcag aaatgtagat
     2101 atttttagat tatggctacg aaatgagcat cgccatgtca ccctacatct cataagagga
     2161 tcgcttctga tgaatgcact gatcgccgta caaaataacg ctgtcgattc aggccaggac
     2221 tatagcggat tcactctcat cccgtcggcg caatccccgc gtctgctgga actcaccttc
     2281 accgaacaga cgaccaaaca gtttctcgaa caggttgccg aatggcccgt gcaggcgctg
     2341 gagtacaaat cgtttctgcg ttttcgggta ggcaaaattc ttgacgatct gtgtgcgaat
     2401 cagctgcaac cattgctgtt gaagcccctg ctaaaccgtg ctgaaggtgc gctgttgatc
     2461 aatgcggtgg gtatcgatga tgtggcgcag gcagatgaga tggtgaagct ggcaacggcg
     2521 gtagcgcatc tgattggtcg ctcaaatttc gatgcgatga gcggtcagta ttacgcgcgt
     2581 ttcgtggtga aaaatgtcga taactcagac agctatctgc gtcagccgca ccgcgtgatg
     2641 gaactgcaca acgacggcac gtatgtcgaa gagatcaccg attacgtgct gatgatgaaa
     2701 atcgatgagc aaaacatgca gggtggaaat tcgttgctgc tgcatctcga tgactgggaa
     2761 catctggacc actatttccg ccatccactg gcgcgtcgcc cgatgcgctt tgccgcgccg
     2821 ccgagcaaaa acgtcagcaa agatgttttc catccagtgt tcgacgttga tcaacagggt
     2881 cgcccggtga tgcgctatat cgaccagttc gtccagccaa aagattttga agaaggcgtg
     2941 tggttgagcg agctttccga tgccattgaa accagcaaag gcattctttc tgtacccgtt
     3001 cccgttggca aattcctgtt gataaacaac ctgttctggc tgcacggtcg cgaccgcttt
     3061 actccgcacc cggatctgcg ccgtgaactg atgcgtcagc gtggctattt cgcttacgcc
     3121 actcaccact accagacgca tcagtaagcg caaaggaatt gagcggatgt atgattttgt
     3181 gattattggc ggcggcatca tcggcatgtc gaccgccatg caactgattg atgtttatcc
     3241 ggatgcccgc attgcgttgc tggaaaaaga gtccggcccg gcctgtcacc agacgggcca
     3301 caacagcggc gtgatccatg ccggggtcta ttacacgccc ggcagcctga aggcgcagtt
     3361 ttgcctggcg ggaaaccgcg ccaccaaagc cttttgcgat caaaacgaca ttcgctatga
     3421 caactgcggc aagatgctga tcgccacgtc cgatctcgaa atggaacgga tgcgcgcgtt
     3481 gtgggaacgc acggcggcga acggtatcga gcgcgagtgg ttaaacgccg aggaactgcg
     3541 cgagcgcgaa ccgaatatca ccgggctcgg cggcattttt gtgccgtcca gcggcattgt
     3601 cagctatcgc gaagtcacag cggcaatggc aaaaatcttc caggccagag gcggtgagat
     3661 tatttataac gccgaagtca gcgccctcag tgagcataaa aacggcgtgg tcgtccgaac
     3721 ccgtcagggc ggcgaatatg aagcatcgac gctgattagc tgttccgggc tgatggctaa
     3781 ccggctggtg aaaatgctcg gcctcgaacc gggttttatt atctgcccgt tccgtggcga
     3841 gtatttccgc cttgcgccgg agcataacca gattgttaac catctgattt accccatccc
     3901 tgacccggca atgccgtttt tgggcgtgca tctcacccgc atgatcgacg gcagcgtgac
     3961 cgtcgggcca aacgcggtgc tggcttttaa acgcgaaggc tatcgcaagc gcgacttctc
     4021 atttagcgac acgctggaaa ttttaggctc gtcggggatt cgccgggtgc tgcaaaacca
     4081 tctacgctca ggactgggcg agatgaaaaa ctcgctgtgc aaaagcggct atctgcggct
     4141 ggtgcaaaag tattgtcccc ggctttcgtt aagcgatctc cagccctggc ccgccggtgt
     4201 gcgggcgcag gcggtatcgc cggacggcaa gctgattgac gattttctgt ttgtcaccac
     4261 cccgcgcacg atccacacct gcaatgcgcc ctccccggca gcgacatcag caattcctat
     4321 tggtgcgcat attgtcagca aggtacaaac gctgttggca agccagagta accccggacg
     4381 cacgctgcga gcgacacgta gtgtggatgc cttacacgcc gcatttaatc aataaccttt
     4441 gaaaacagga cgtaacaatg aaacttaacg acagtaactt attccgccag caggcgttga
     4501 ttaacgggga atggctggac gccaacaatg gcgggatcat cgacgtcacc aatccggcga
     4561 acggcgacaa gctgggtagc gtgccgaaaa tgggcgctga tgaaacccgc gccgctatcg
     4621 acgccgccaa ccgcgccctg cccgcctggc gtgcgctcac cgccaaagaa cgcgccaaca
     4681 ttctgcgcaa ctggttcaat ttgatgatgg agcatcagga cgatttagcg cgcctgatga
     4741 ccctcgaaca gggcaaacca ctggccgaag cgaaaggcga aatcagctac gctgcctctt
     4801 ttattgagtg gtttgccgaa gaaggcaaac gtatttatgg cgataccatt cccggtcatc
     4861 aggccgataa gcgcctgatt gttatcaagc agccgattgg cgttaccgca gctatcacgc
     4921 cgtggaactt cccggcggcg atgattaccc gtaaagccgg tccggcgctg gcggcaggct
     4981 gcaccatggt gctgaagccc gccagtcaga caccgttctc tgcgctggcg ctggcggagc
     5041 tggcgattcg cgcgggcatt ccggctggcg tgtttaacgt ggtcaccggt tcggcaggcg
     5101 cggtcggtaa tgaactgacc agcaacccgc tggtacgcaa actgtcgttt accggttcga
     5161 ccgaaattgg ccgacagtta atggaacagt gcgcgaaaga catcaaaaaa gtgtcgctgg
     5221 agctgggcgg caacgcgccg tttatcgtct ttgacgatgc cgatctcgat aaagccgtgg
     5281 aaggcgcgct ggcctcgaaa ttccgcaacg ccgggcaaac ctgcgtctgc gccaaccgtt
     5341 tggcgtgtat gaccgctttg ccgaaaaatt gcagcaggcg gtgagcaaac tgcacatcgg
     5401 cgacgggctg gataaaggcg tcaccatcgg gccgctgatc gatgaaaaag cggtagcaaa
     5461 agtggaagag catattgccg atgcgctgga gaaaggtgcg cgtgtggttt gcggcggtaa
     5521 agcggatgaa cgcggcggca acttcttcca gccgaccatt ctggtggacg tgccggccaa
     5581 cgccaaagtg tcgaaagaag agacgttcgg ccccctcgcc ccgctgttcc gctttaaaga
     5641 tgaagccgat gtgattgcgc aagccaatga caccgagttt ggccttgccg cctatttcta
     5701 cgcccgtgat ttaagccgcg tcttccgcgt gggcgaagcg ctggagtacg gcatcgtcgg
     5761 catcaatacc ggcattattt ccaatgaagt ggccccgttc ggcggcatca aagcctcggg
     5821 tctgggtcgt gaaggttcga agtatggcat cgaagattac ttagaaatca aatatatgtg
     5881 catcggtctt taactggaga atgcgaatga acagcaataa agagttaatg cagcgccgca
     5941 gtcaggcgat tccccgtggc gttgggcaaa ttcacccgat tttcgctgac cgcgcggaaa
     6001 actgccgggt gtgggacgtt gaaggccgtg agtatcttga tttcgtgggc gggattgcgg
     6061 tgctcaatac cgggcacctg catccgaagg tggtggccgc ggtggaagcg cagttgaaaa
     6121 aactgtcgca cacctgcttc caggtgctgg cttacgagcc gtatctggag ctgtgcgaga
     6181 ttatgaatca gaaggtgccg ggcgatttcg ccaagaaaac gctgctggtt acgaccggtt
     6241 ccgaagcggt ggaaaacgcg gtaaaaatcg cccgcgccgc caccaaacgt agcggcacca
     6301 tcgcttttag cggcgcgtat cacgggcgca cgcattacac gctggcgctg accggcaagg
     6361 tgaatccgta ctctgcgggc atggggctga tgccgggtca tgtttatcgc gcgctttatc
     6421 cttgcccgct gcacggcata agcgaggatg acgctatcgc cagcatccac cggatcttca
     6481 aaaatgatgc cgcgccggaa gatatcgccg ccatcgtgat tgagccggtt cagggcgaag
     6541 gcggtttcta cgccgcgtcg ccagccttta tgcagcgttt acgcgctctg tgtgacgagc
     6601 acgggatcat gctgattgcc gatgaagtgc agagcggcgc ggggcgtacc ggcacgctgt
     6661 ttgcggtgga gcagatgggc gtggcgccgg atcttaccac ctttgcgaaa tcgatcgctg
     6721 gcgggcgtca ccgggcgcgc ggaagtgatg gacgctgttg caccgggcgg tctgggcggc
     6781 acctatgccg gtaacccgat tgcctgcgtg gctgcgctgg aagtgttgaa ggtgttcgag
     6841 caggaaaatc tgctgcaaaa agccaacgat ctggggcaga agctaaaaga cggattgttg
     6901 gcgatagccg aaaaacaccc ggagatcggc gacgtacgcg ggctgggagc gatgattgcc
     6961 atcgagctgt ttgaagatgg cgatcacagc aaaccggacg caaaactcac cgccgggatc
     7021 gtggcacgcg cccgcgataa gggcctgatt cttctctcct gcggcccgta ttacaacgtg
     7081 ctgcgcatcc ttgtaccgct caccattgaa gacgctcaga tccgtcaggg tctggagatt
     7141 atcggtcagt gttttgatga ggcgaagcag tagcaccgtc cccatgcagg aggcgacgct
     7201 gcgcgtcttg tccggcctac gagaatccag gtcggataag gcgtttacgc cgcatccgac
     7261 aatctgtacg tgaacaggaa taaatctatg tcggccggat aatgcggagc cgctctccgg
     7321 caaaaagaat caataacaat taaacgcgtg acccggcgcg ggaaatgtcg gggcgctctc
     7381 ccaagtgaca cactttcgag aggattcagg atggggcaat catcgcaacc acatgagtta
     7441 ggcggcgggc tgaaatcacg ccacgtcacc atgttgtcta ttgccggtgt tatcggcgca
     7501 agtctgtttg tcggttccag cgtcgccatc gccgaagcgg gcccggcggt attactggcc
     7561 tatctgttcg ccgggctact ggtggttatg attatgcgga tgttggcgga aatggcggtt
     7621 gccacgcccg ataccggttc gttttccacc tatgccgata aagccattgg tcgctgggcg
     7681 ggctatacca tcggctggtt gtactggtgg ttttgggtac tggttatccc gctggaagcc
     7741 aacatcgccg ccatgatcct gcactcgtgg gttccaggca ttcccatctg gttattttcc
     7801 ctcgtcatta cccttgcctt aactggcagt aatttattaa gcgttaaaaa ctacggcgaa
     7861 tttgagttct ggctggcgct gtgcaaagtc atcgctatcc tggcctttat tttccttggt
     7921 gcagtcgcaa ttagcggttt ttacccttat gccgaagtga gcgggatctc aagattgtgg
     7981 gatagcggcg gctttatgcc caacggcttc ggtgcggtat taagcgcgat gttgatcacc
     8041 atgttctcgt ttatgggcgc agaaattgtc accattgccg ccgcggaatc cgacacgccg
     8101 gaaaaacata ttgtccgcgc cactaactcg gttatctggc gtatttctat cttctatttg
     8161 tgctctattt ttgtcgtcgt ggcattaatt ccgtggaata tgcccggact aaaagccgtc
     8221 ggttcttatc gctcggtact ggaattgctc aatattcccc atgcgaaatt aatcatggac
     8281 tgtgtgatat tactttccgt aaccagctgc ctgaactcgg cgctgtatac cgcttccagg
     8341 atgctctact ccttaagccg tcgcggagat gcgcctgcgg taatgggtaa aatcaaccgc
     8401 agtaaaaccc cgtacgtggc ggtgttactc tccaccggcg cggcattctt aacggtggtg
     8461 gtgaactatt acgcgcctgc gaaggtattt aaatttctga tcgacagctc cggcgctatc
     8521 gccctgctgg tttatttagt catcgccgtt tcacagttgc ggatgcgcaa aattctgcga
     8581 gcagaaggaa gcgaaattcg cttgcgcatg tggctttatc cctggctcac ctggctggtc
     8641 atcggcttta ttacctttgt gttggtagtg atgctattcc gcccggcgca acagttagaa
     8701 gtgatctcca ccgacttatt agcaataggg attatctgta ccgtgccaat tatggcgcgc
     8761 tggaataagc tgataatgtg gcaaaaaaca cccgttcata atacgcgctg ataataatca
     8821 ggagtcacac catgaccatt acgtctctgg atggctatcg ctggctgaag aacgatatta
     8881 ttcgcggtaa ttttcaaccg gatgaaaaat tacggatgag tttgctgaca tcgcgttatg
     8941 cacttggcgt tgggccgttg cgggaagcac tttctcaact ggtggcggaa cggctggtca
     9001 cggtggtgaa tcaaaaaggg tatcgggtgg cgtctatgtc agagcaggag ctgctcgata
     9061 ttttcgatgc ccgcgccaat atggaagcga tgttagtgag tctggcgatt gcccgcggta
     9121 gcgatgagtg ggaggcagaa gttctcgcaa aagcgcatct gctcagtaag ctggaagcct
     9181 gtgacgccag cgagaaaatg cttgatgagt gggatctgcg tcatcaggcg tttcatacag
     9241 caattgtggc gggctgtggt tctcactatt tgctgcaaat gcgtgaacgg ttgtttgatc
     9301 tggcggcgcg ctatcgattt atctggctgc ggcgaacggt gctttcggta gaaatgctgg
     9361 aggataaaca cgatcagcac cagaccctga ctgcggcggt actggcgcga gataccgcgc
     9421 gcgccagtga gttaatgcgc cagcatttac tgacgccaat tcccattatc cagcaggcga
     9481 tggctggcaa ttaactactc ttccggaata cgcaacactt gccccggata aattttatcc
     9541 gggcttttta gcatcggttt attcgcttcg aagattttat tgtacagatt agcgttaccg
     9601 tagacctgtt tggaaatggc actcagagtg tcgccagact taacggtata aaactggctg
     9661 gcagtggctg gtgtcgccgt tttcacctga tcatcaacac tggcaatacc ggaaatattc
     9721 cccaccgcaa caaggatttt ctccttcgcc tcctgactca ggccgtcacc agtgaccgtc
     9781 gctttgccgt cggcaatttg aatgttcact ttatcggcat caggtatacc ggttttgctc
     9841 agatgctcct gcaccttctt cgcctgatcg tctttatcgt gctgacctgt aaccgcgtcc
     9901 cagagttttt ctccggcatc tttcacaaaa ttgaacagac ccatagctac ctcattcgtt
     9961 aacggaaaca ctcagaaagt gtagcagagg aacgcggcgc gttaacgccg cgggggggag
    10021 cacaggttta atcgcgggtt tgcacccaga acgcgtgaat caaaccgggg atatacccaa
    10081 gcagtgtcag cagaatatta ataatgaacg cccaaccgaa ccctttaccg agcagcacgc
    10141 cgagcggcgg cagaatgatg gtgatgacga ttctccagaa acccatatgt actccctata
    10201 agaaaattac tcattgttta aaaagagatt ttatctctta agcgtagtaa ttttagcgga
    10261 gcctgccagt ttcagcttac gcttttactc tcatttacgc tgctgaggct ggtatatgtt
    10321 gcatttttag tttagagttt acttaattta gaaaatactt aaataaatat gactgaactc
    10381 gcgcaattac aggccagtgc cgaacaggca gcggccttat tgaaagcaat gagccatcct
    10441 aaacgattgc tgattctgtg catgcttagc ggttcccccg gcaccagcgc gggagagctg
    10501 acgcgcatta ccggactgag tgcctctgcg acatcacagc atctcgctcg tatgcgggac
    10561 gaagggctta tcgacagcca acgggatgcc caacgcattc tatattccat taaaaatgag
    10621 gcggtaaatg ctattatcgc caccctgaaa aatgtctatt gtccgtaagg agtcactatg
    10681 gctttgacaa ccatttcgcc gcatgatgca caagaattaa tcgcacgcgg cgcaaagtta
    10741 atcgatattc gtgacgctga tgaatatctt cgtgaacata ttcctgaagc agatctggct
    10801 ccattatccg tgctggaaca gtcaggtctt ccacctaaat tacgtcgcga gcaaattata
    10861 ttccactgcc aggcaggtaa acgcaccagt aataacgccg ataaattagc agcgattgcc
    10921 gctcccgcag aaatattttt actcgaagat gggattgatg gctggaaaag agctggattg
    10981 ccagtagcgg taaataaatc tcaacccttg ccgttaatgc gccaggtgca gatcgctgcg
    11041 ggtggtttaa tattaatcgg cgttgtactg ggttataccg taaatagcgg tttcttctta
    11101 ttaagtggct ttgttggtgc cgggttactg tttgcaggaa tcagcggttt ttgtggaatg
    11161 gcaaggttgt tagataagat gccgtggaac caacgagctt gagaagcgac gccggacgcg
    11221 ccctagcagc gacatccggc ctcagtaatt agatcaggaa atcgtcgaga gatttacctt
    11281 ctgccagcgc ctgagcaatt ggcttcggtg tacggccctg accggtccag gtcttagttt
    11341 caccgttaac atcagtgaat ttatatttcg ccggacgcgg ctggcgtttt ttaccagcac
    11401 gtggtgcagc agcagagcta ttacccaata actcttccgg gttaattccg tcagctttca
    11461 tcagctccag ccaggtgcta attttttcct gacgctcagc cagttcacgc tgctgctgtt
    11521 cttcttcttc acgtctttct ttagtgacaa ccctgaattt ttcgagcatt tcttcaagaa
    11581 cgtcaatgga gaattcgcga gccatcgcac ggagggttcg aatgttattt aaactttgta
    11641 acattacgga cataataaag aaaacctttt aacgccaaaa caaaaaagta tttcgtcgcg
    11701 tagtgtaagc gatcacttat tatatttcca caaaatttaa tctatttaca gtcctgcgcg
    11761 agattatttc agctgttatt ttctgaaact ctcagaataa tttcaagatt atatattagc
    11821 cattttgatg agtaatttag gttattggtg aacagagtgg cgctctctgc tcgctaactc
    11881 cgcaagcctg ataaaaccga agtgaataaa aatgcaatat aacagaataa aagaaaacac
    11941 ccctcactgg tgctttctgc tgttaatgta cattttctgg catcaaaaat gctgtaaatg
    12001 acccggtcac gacaaacacc gaattctcta cgcttatagc gttacctcac ccccaaactt
    12061 aaaggcaagg tcatatccaa ttgatttgat tgaaaataaa tcatatcggc atgtaaaaat
    12121 ccacaatgta caaaaaacga gccgttatgg aatattttat ctacaaaaac tgactaaata
    12181 aaagtttttc actaattgat tagtcatagc cagcgatata cgctatgcga aaatgcagat
    12241 ggcaatgaga tccactgctt tcatctccat taacatccca ttacgcttta ttaaggagca
    12301 ttagcatgtt ctcaccgcag tcacgcttgc gtcatgcagt tgcagatacg ttcgcgatgg
    12361 ttgtttactg ttctgtcgtg aacatgtgta ttgaagtttt cctctccgga atgagcttcg
    12421 aacagtcttt ttattccaga ttggtagcga ttccggtgaa catcttaatt gcatggccat
    12481 acggtatgta ccgcgatctg tttatgcgcg cggcacgcaa agttagcccg tcgggctgga
    12541 taaaaaatct ggctgatatc ctggcttatg tgacgttcca gtcaccggtg tatgtggcga
    12601 tcttgttagt ggtgggcgca gactggcatc agattatggc ggcggtcagt tcaaacatcg
    12661 ttgtttcgat gttgatgggg gcggtttatg gctacttcct cgattattgc cgccgactgt
    12721 ttaaagtcag ccgttaccag caggtaaaag cctgactctt cttttcgcga ctggcatcgc
    12781 cagtcgcgtc tttaactggc ttcgccaaat aaaccattca aataacgttc aagcgcaaca
    12841 cgcgaactga agccatgcgg gataccgtaa tgctcgtgtc gctcgcctgc taaatagagc
    12901 ggaaattgct ggtaatgatc gcaagtttta atatcggaag cgggttcagc cagtgttgaa
    12961 ctgcgttctt ttaatgttgg atgaattacc agagcggtac gtcccattcg cgcttcgcga
    13021 ttaacataga cataattttc cccacggcgg taaccatacg ctttctgggt taccacatcg
    13081 acagtaaaac cgactttttc aagtacgcgc gccacctcgt ctggtcgtaa atacatattt
    13141 gatcctcgtt attttcaacc gcg
//
LOCUS       DADMHC010000111        13145 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.111, whole genome shotgun sequence.
ACCESSION   DADMHC010000111 DADMHC010000000
VERSION     DADMHC010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13145)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13145)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13145
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.111"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..469)
                     /locus_tag="JNZ57_002593"
     CDS             complement(<1..469)
                     /locus_tag="JNZ57_002593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stationary phase growth adaptation protein"
                     /protein_id="HAY8828777.1"
                     /translation="MKQEVEKWRPFGHPDGDIRDLSFLDAHQAVYVQHHEGKEPLEYR
                     FWVTYSLHCFTKDYEHQTNEEKQSLMYHAPKESRPFCQHRYNLARTHLKRTILALPES
                     NVIHAGYGSYAVIEVDLDGGDKAFYFVAFRAFREKKKLRLHVTSAYPISEKQKG"
     gene            complement(682..4905)
                     /gene="rpoC"
                     /locus_tag="JNZ57_002594"
     CDS             complement(682..4905)
                     /gene="rpoC"
                     /locus_tag="JNZ57_002594"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HAY8828778.1"
                     /translation="MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETI
                     NYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERM
                     GHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQIL
                     TEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLT
                     KRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRN
                     NRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGK
                     QGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLAT
                     TIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLH
                     PLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVL
                     GLYYMTRDCVNAKGEGMVLTGPKEAERLYRSGLASLHARVKVRITEYEKDANGELVAK
                     TSLKDTTVGRAILWMIVPKGLPYSIVNQALGKKAISKMLNTCYRILGLKPTVIFADQI
                     MYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAEVAEIQEQFQSGLVTAGERYNKV
                     IDIWAAANDRVSKAMMDNLQTETVINRDGQEEKQVSFNSIYMMADSGARGSAAQIRQL
                     AGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTR
                     RLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTADI
                     LVPRNTLLHEQWCDLLEENSVDAVKVRSVVSCDTDFGVCAHCYGRDLARGHIINKGEA
                     IGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKLSNVKSVVNSSGK
                     LVITSRNTELKLIDEFGRTKESYKVPYGAVLAKGDGEQVAGGETVANWDPHTMPVITE
                     VSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKIVDAQGNDV
                     LIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPRVADLFE
                     ARRPKEPAILAEISGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFEGERV
                     ERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLR
                     KATIVNAGSSDFLEGEQVEYSRVKIANRELEANGKVGATYSRDLLGITKASLATESFI
                     SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEA
                     PAAPQVTAEDASASLAELLNAGLGGSDNE"
     gene            complement(4982..9010)
                     /gene="rpoB"
                     /locus_tag="JNZ57_002595"
     CDS             complement(4982..9010)
                     /gene="rpoB"
                     /locus_tag="JNZ57_002595"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HAY8828779.1"
                     /translation="MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPE
                     GQYGLEAAFRSVFPIQSYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRL
                     VIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSD
                     KGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTE
                     QILDLFFEKVIFEIRDNKLQMELVPERLRGETASFDIEANGKVYVEKGRRITARHIRQ
                     LEKDDVKLIEVPVEYIAGKVVAKDYIDESTGELICAANMELSLDLLAKLSQSGHKRIE
                     TLFTNDLDHGPYISETLRVDPTNDRLSALVEIYRMMRPGEPPTREAAESLFENLFFSE
                     DRYDLSAVGRMKFNRSLLREEIEGSGILSKDDIIDVMKKLIDIRNGKGEVDDIDHLGN
                     RRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISAAVKEFFGS
                     SQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEG
                     PNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVTDEIHYLSAIEEGNYVIAQANSNLD
                     EEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMG
                     ANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKRGGVVQYVDASRIVIKVNEDE
                     MYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQ
                     NMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEITADIPN
                     VGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVK
                     DSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLSEELQILEAGLF
                     SRIRAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDELKHEFEKKLE
                     AKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPIEDMPYD
                     ENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAKLREFIQ
                     RAYDLGADVRQKVDLSTFSDEEVMRLAENLRKGMPIATPVFDGAKEAEIKELLKLGDL
                     PTSGQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGK
                     AQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
                     ESFNVLLKEIRSLGINIELEDE"
     gene            complement(9330..9695)
                     /gene="rplL"
                     /locus_tag="JNZ57_002596"
     CDS             complement(9330..9695)
                     /gene="rplL"
                     /locus_tag="JNZ57_002596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HAY8828780.1"
                     /translation="MSITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAG
                     PVEAAEEKTEFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKD
                     DAEALKKALEEAGAEVEVK"
     gene            complement(9762..10259)
                     /gene="rplJ"
                     /locus_tag="JNZ57_002597"
     CDS             complement(9762..10259)
                     /gene="rplJ"
                     /locus_tag="JNZ57_002597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002438625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HAY8828781.1"
                     /translation="MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKA
                     GREAGVYMRVVRNTLLRRAVEGTPFECLKDAFVGPTLIAYSMEHPGAAARLFKEFAKA
                     NAKFEVKAAAFEGELIPASQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRD
                     AKEAA"
     gene            complement(10672..11376)
                     /gene="rplA"
                     /locus_tag="JNZ57_002598"
     CDS             complement(10672..11376)
                     /gene="rplA"
                     /locus_tag="JNZ57_002598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HAY8828782.1"
                     /translation="MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDV
                     AVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLAD
                     QIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTM
                     GAGVAVDQAGLSASVN"
     gene            complement(11380..11808)
                     /gene="rplK"
                     /locus_tag="JNZ57_002599"
     CDS             complement(11380..11808)
                     /gene="rplK"
                     /locus_tag="JNZ57_002599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006121495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HAY8828783.1"
                     /translation="MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNA
                     KTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKIS
                     RAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVED"
     gene            complement(11968..12513)
                     /gene="nusG"
                     /locus_tag="JNZ57_002600"
     CDS             complement(11968..12513)
                     /gene="nusG"
                     /locus_tag="JNZ57_002600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005280494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HAY8828784.1"
                     /translation="MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMV
                     PTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAP
                     ISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKV
                     SVSIFGRATPVELDFSQVEKA"
     gene            complement(12515..12898)
                     /gene="secE"
                     /locus_tag="JNZ57_002601"
     CDS             complement(12515..12898)
                     /gene="secE"
                     /locus_tag="JNZ57_002601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007665874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HAY8828785.1"
                     /translation="MSANTEAQGSGRGLEAMKWVVVVALLLVAIVGNYLYRDIMLPLR
                     ALAVVILIAAAGGVALLTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTA
                     VMSLILWGLDGILVRLVSFITGLRF"
BASE COUNT         3060 a         3555 c         3223 g         3307 t
ORIGIN      
        1 tacctttctg tttttcagaa atgggataag cgctagttac atgcaaacgg agttttttct
       61 tttccctgaa agccctgaac gcaacaaagt aaaatgcctt atctcctccg tctaagtcca
      121 cctcaatcac ggcatagcta ccatacccgg catgaataac gttgctttct ggcagcgcca
      181 aaatagttct ttttaagtgt gtgcgcgcta agttataacg gtgctggcag aagggacgag
      241 attctttagg cgcgtggtac attaacgatt gtttttcttc gttcgtctga tgttcataat
      301 cttttgtgaa gcagtgaaga gagtaggtaa cccaaaagcg atactctaaa ggctctttgc
      361 cctcatgatg ctgaacgtag acagcctgat gagcatcaag aaatgataaa tcacgaatat
      421 caccatccgg atgtccaaaa ggtcgccact tttccacttc ctgtttcatt ctcgttcctt
      481 aagaaagtta cacaggaata gtatcgaatc cttgccgagt ttgactcaat tagttcagtc
      541 agtttcagga tattagtcat ctctacattg attatgagta ttcagaaatt ccttaaatat
      601 tctgacaaat gctctttccc taaactcccc ccataaaaaa acccgccgaa gcgggttttt
      661 acgttatttg cggattaacg attactcgtt atcagaaccg cccagacctg cgttcagcag
      721 ttctgccagg ctggcagatg cgtcttctgc agtcacctgc ggtgcagccg gagcttcacc
      781 cgcagcacgg cgacgcatac gatcctggtg gtacgcgtaa ccggtacctg ccgggatcag
      841 acgacccacg ataacgttct ctttcaggcc gcgcagttcg tcgcgtttgc ccgcaacggc
      901 tgcttcggtc agcacgcgag tggtctcctg gaacgatgcc gcggagatga aggactcggt
      961 tgccagagac gctttggtga tacccagcag atcgcgggag taagttgcac ccactttgcc
     1021 gttcgcttcc agttcgcggt ttgcgatctt gacgcgagag tattcaacct gttcgccttc
     1081 caggaagtcg gagctgcccg cgttaacgat ggtagcttta cgcagcatct gacgaacgat
     1141 aacttcgatg tgtttatcgt taatcttaac gccctgcaga cggtatacgt cctgtacttc
     1201 gttaacgatg taacgagtaa cagcatgaac accacgcaga cgcagaatgt cgtgcggcgc
     1261 ttccggaccg tcggaaatta cgtcaccacg ttctacacgt tcaccttcga acacgttgag
     1321 ctgacgccat ttcggaatca tctcttcgta cggatcgcta ccgtctaccg gggtgataac
     1381 aagacgacgt ttacctttgg tttctttacc gaaggaaacg ataccgctga tttcagccag
     1441 gattgccggc tctttcggac gacgtgcttc gaacaggtcc gcaacgcgcg gcagaccacc
     1501 ggtgatgtcc ttggtaccgc cggattcctg cggaatacgc gccagggtgt caccagagct
     1561 gatctgtacg ccatcttcca gctgaacaat cgctttaccc ggcaggaagt actgcgcagg
     1621 catatcggta cccggaatca gaacgtcgtt accctgagca tcaacgattt tcagtgccgg
     1681 acgcagatct ttaccacctg cggtacgttc tgcggaatcc agaaccacca gcgaagacag
     1741 accggtcaat tcgtctgtct gacgagtaat ggtctgaccg tcgatcatgt cagtaaagcg
     1801 tacaaaaccg cttacttcgg tgataaccgg catggtgtgc gggtcccagt ttgcaacggt
     1861 ttcgccgcca gcaacctgtt cgccatcgcc tttcgccagt accgcaccgt aaggtacttt
     1921 gtagctttct ttggtacgac cgaattcgtc gatcagtttc agttcagtat tacgggaagt
     1981 gataaccagt ttaccgctgg agttcacaac cgacttcacg ttgctgagct tgatgctacc
     2041 tttgtttttc acctggatgc tggattcagc agccgcacga gatgccgcac caccgatgtg
     2101 gaacgtacgc atggtcagct gtgtacccgg ttcaccgatg gactgtgccg cgataacacc
     2161 gattgcttca cccttgttga tgatgtggcc acgcgccagg tcacgaccgt agcagtgcgc
     2221 acatacacca aagtcggtgt cacaagatac aacagaacgt actttaaccg cgtcgacaga
     2281 gttctcttcc agcaggtcac accactgttc gtgcagcagc gtgttgcgcg gaacgaggat
     2341 atcagcagta cccggcttca gaacgtcttc agcagttaca cgacccagta cgcgatcgcg
     2401 cagcggctct ttaacatcac caccttcgat aaccggagtc atcatgatac cttcatgggt
     2461 accacaatcg tcttcggtaa ccaccaggtc ctgcgccacg tcaaccagac gacgagtcag
     2521 gtaaccggag tttgcagttt tcagtgcggt atccgccaga cctttacgag caccgtgggt
     2581 ggagatgaag tactggagta cgttcagacc ttcacggaag ttcgcggtga ttggcgtttc
     2641 gatgatggag ccatccggct tcgccatcag accacgcata ccagcaagct gacgaatctg
     2701 tgccgcagaa ccacgcgcac cggagtcggc catcatgtag atgctgttga aggaaacctg
     2761 cttctcttcc tgaccgtcac ggttaatcac ggtttcagtt tgcaggttat ccatcatcgc
     2821 tttggataca cgatcgttcg ccgcagccca gatatcgata actttgttgt agcgttcgcc
     2881 cgcagttacc agaccagact ggaactgctc ctgaatttca gcaacttctg cttctgcctc
     2941 ggagatgatt tcgtgtttct tctccgggat gaccatgtca tcgatgccaa cagatgcacc
     3001 agaacgcgct gcataggcga agccggtgta catgatctgg tccgcaaaaa taacggtcgg
     3061 tttcagaccg agaatgcggt agcaggtgtt cagcattttg gagattgctt ttttacccag
     3121 cgcctggttg acgatggagt aaggcagacc tttcggtaca atcatccaca gaatggcacg
     3181 gccaacagtc gtgtctttca ggctggtttt cgctactaat tcaccgtttg catctttttc
     3241 atactcggtg atacgcactt taacgcgcgc atgcagagaa gccagaccag agcgatacag
     3301 acgttctgct tctttcgggc cagtcagcac catgccttcg cctttggcgt taacacagtc
     3361 acgggtcata tagtacagac ccagaacaac gtcctgagac ggaacgatga ttggttcgcc
     3421 gttcgccggg gacaggatgt tgttggtaga catcatcagc gcacgcgctt ccagctgggc
     3481 ttccagcgtc agcggtacgt gaacagccat ctggtcacca tcgaagtcgg cgttatatgc
     3541 cgcacaaacc agcgggtgca gctggatagc tttaccttcg atcagtaccg gttcaaatgc
     3601 ctggataccc agacggtgca gagtcggtgc acggttcagc agtaccgggt gttcgcggat
     3661 aacttcgtcc aggatatccc aaacgacagc ttcttcgcgc tcaaccattt tcttcgcagc
     3721 tttaatggtg gtagcaagac cacgcagttc cagcttgccg tagatgaacg gtttgaacag
     3781 ctccagcgcc attttcttcg gcagaccgca ctgatgcaga cgcaggtatg gacctacggt
     3841 gattacagaa cgaccggagt agtcaacacg cttaccgagc aggttctgac ggaaacgacc
     3901 ctgtttacct ttgatcatgt cggccaaaga tttcagagga cgcttgttag aaccggtgat
     3961 cgcacgaccg cgacgaccgt tatccagcag ggcgtctacc gcttcctgca gcatacgttt
     4021 ttcgttacgt acgatgatgt ccggcgcagc cagatccagc agacgtttca gacggttgtt
     4081 acggttaatg acgcgacgat acagatcgtt caggtcagaa gtcgcgaaac gaccaccatc
     4141 cagcggaacc agcggacgca gatctggcgg cagtaccggc agaacggtca ggatcatcca
     4201 ctctggtttg ttaccagact gaacgaacgc ttccagcagt ttgatacgct tggtcagctt
     4261 tttacgcttg gtttcggagt tggtttcgtt cagctcttca cgcagctgtt cgcactcttg
     4321 ctccagatcc atgctcttca gcagagcctg gattgcttcc gcacccatct tcgcgtcgaa
     4381 ttcgtcaccg aactcttcca gcgcgtccag atactgctct tcagtcagga tctgctgacg
     4441 ttccaggttg gtcataccgc cttcgataac cacataggat tcaaagtaca gtacgcgttc
     4501 gatatcgcgc agcggcatat cgagcagcag accgatacgg gacggcagcg atttcaggaa
     4561 ccagatatgc gcagtcgggg aagccagttc gatgtggccc atacgctcac ggcgtacttt
     4621 agtctgggtc acttcaacgc cgcacttctc acagatgacg ccacggtgtt tcaggcgctt
     4681 gtacttaccg cacaggcact cgtaatcttt taccggccca aagatacggg cgcagaaaag
     4741 gccgtcacgt tctggtttga acgtacggta gttgatggtt tccggctttt taacttcacc
     4801 gaaagaccat gaacggatca tgtctggcga agccagagca attttgatcg catcaaactc
     4861 ttcggtttta gtctgcgctt tcagaaactt taataaatct ttcacggatt tgctcccgtc
     4921 ggagttagca caatccgctg ccgggtttta acccgacagc agtgacctgt ttgagcgaga
     4981 attactcgtc ttccagttcg atgttgatac ccagcgaacg aatctctttc aacaatacgt
     5041 tgaaggattc tggcatgccc ggctccatct gatggttgcc gtccacgatg tttttataca
     5101 tcttggtacg accgttcacg tcatcagact taacggtgag catttcctgc agggtgtatg
     5161 ctgcgccgta tgcttccagc gcccacactt ccatctcccc gaaacgctga ccaccgaact
     5221 gtgccttacc acccagcggc tgctgagtaa ccaggctgta agaaccggtg gaacgcgcgt
     5281 gcatcttgtc gtcgaccagg tggttcagtt tcagcatgta catgtaacca acggttaccg
     5341 gacgctcgaa ctgttcacca gtgcgaccat cgtacaggcg gatctgaccg gaagtcggca
     5401 ggtcgccaag tttcagcagc tctttaattt ctgcttcttt cgcaccgtcg aacaccggcg
     5461 ttgcgattgg catacctttg cgcaggtttt cagccagacg cataacttct tcatcgctga
     5521 aggtactcag gtcaactttc tgacgaacgt cagcgcccag atcgtacgca cgctggatga
     5581 attcgcgcag tttcgcgact tcttgctgct gtttcagcat ggcgttgatc ttgtcgccga
     5641 tacctttcgc agccataccc aggtgggttt cgaggatctg accgatgttc atacgagacg
     5701 gtacgcccag cgggttcagt acgatgtcta ccggcgtacc gttttcatcg taaggcatat
     5761 cttcgatcgg gttgatctta gaaattacac ccttgttacc gtgacgacct gccatcttgt
     5821 caccaggctg gatacggcgt ttaaccgcca gatatacctt aacaatcttc agtacgcccg
     5881 gtgccagatc gtcgccctgg gtgattttgc ggcgtttcgc ttcgagtttc ttctcgaact
     5941 cgtgtttcag ttcgtcatac tgctcagcca gctgttccag ctgattttgt ttctcttcgt
     6001 ctgtcaggcc cagctccagc cagcgatcgc gcggcagttt gtcgagcttc tcagcttcaa
     6061 cgccaccggc taccagcaca gcacggatac ggctgaacag acccgcttcg aggatctgca
     6121 gttcttcaga caggtctttc ttcgcctgtt tgagctgcat ttcttcgatt tccagcgcac
     6181 gtttgtcttt ttctacgcca tcgcgagtaa agacctgaac gtcgataacc gtaccggata
     6241 caccgtttgg tacgcgcaga gaagagtctt taacgtcaga ggctttctca ccgaagatcg
     6301 cacgcagcag tttttcttct ggggtcagct gagtttcacc tttcggcgtt accttaccaa
     6361 ccagaatgtc gccaccggtc acttccgcac caatgtaaac gataccggat tcatctagtt
     6421 tggagagcgc agcttcaccc acgttcggga tgtcagcggt gatctcttcc ggccccagct
     6481 tggtgtcacg ggacacacac gccagttcct gaatgtggat ggtggtgaaa cggtcttcct
     6541 gaacaacacg ctcggatacg aggatggagt cttcgaagtt gtaaccattc cacggcatga
     6601 acgctacgcg catgttctga ccaagcgcca gttcaccgag gtcggtggac ggaccgtctg
     6661 ccagcacgtc gccacgttca accggttcac ccagagacac acacggcatc tggttgatac
     6721 aggtgttctg gttagaacgg gtgtatttgg tcaggttgta gatgtcgata cctgcttcac
     6781 ccggatacat ctcgtcttcg ttaactttga taacgatacg ggaagcatcc acgtactgaa
     6841 cgacaccacc acgtttagct accgcagtta caccggagtc aacggcaaca gcacgttcca
     6901 taccagtacc aaccagcggc ttatcagcgc gcagagtcgg aacggcctga cgttgcatgt
     6961 tcgcacccat caatgcacgg ttggcgtcat cgtgttccag gaacgggatc agggacgcac
     7021 cgacggatac cacctgctgg gtggatacgt ccatgtagtc aacctggtcg cggctgaaca
     7081 agctggattc gcctttgcta cggcaagtta ccagatcttc tacgaagtgg ccttcttcat
     7141 ccaggttgga gttcgcctgg gcgataacgt agttgccttc ttcgatagca gacaggtagt
     7201 gaatttcgtc agttacaaca ccgtcggtca ctttacgata cggagtctca aggaagccgt
     7261 attcgttagt ctgtgcgtac acggacagag agttgatcag accgatgttc ggaccttcag
     7321 gggtttcgat tggacatacg cgaccgtagt gagtcgggtg tacgtctcga acttcgaagc
     7381 ctgcacgttc acgggtcaga ccgcctgggc cgagtgcgga gatacgacgt ttgtgcgtaa
     7441 tctcagacag cgggttgttc tggtccataa actgagacag ctggctggaa ccgaagaact
     7501 ctttcactgc tgcggaaatc ggcttggcgt tgatcatatc ctgaggcatc agggtatcca
     7561 gatcgcccag agacagacgc tctttcaccg cacgctctac acgtaccagg ccaacgcgga
     7621 actggttttc cgccatttcg ccaacggaac ggatacgacg gttgccgagg tggtcgatat
     7681 catcgacttc gcctttaccg ttacggatat cgatgagctt tttcataaca tcaatgatgt
     7741 cgtctttgct caggataccg gaaccttcga tttcttcgcg cagcagagaa cggttgaact
     7801 tcatacgacc aaccgcagac aagtcataac ggtcttcgga gaagaacagg ttctcgaaca
     7861 ggctttcagc tgcttcacga gtcggcggct cgccagggcg catcatgcgg tagatttcta
     7921 ccagtgcgct cagacggtcg ttagttgggt cgacacgtaa ggtttcagag atatatgggc
     7981 cgtgatccag atcgttggtg aacagcgttt cgatacgctt gtgaccagac tggctcagct
     8041 tagccagcag atccaggctc agctccatgt tcgctgcgca gatcagctcg ccggtagact
     8101 catcaatata gtctttagca accactttac ctgcgatgta ctcaaccggg acttcgataa
     8161 gtttgacgtc gtctttttcc agctggcgaa tgtggcgcgc agtgatacgg cggccttttt
     8221 ctacgtacac tttaccgtta gcttcgatgt caaaagatgc ggtttcacca cgcaggcgtt
     8281 ccggcaccag ttccatctgc agcttgttat cacggatttc aaagataact ttttcaaaga
     8341 acaggtcgag gatctgctct gtggtgtagt tcagggcgcg cagaatgatg gtcgcaggca
     8401 gtttacggcg acggtcgata cgtacgaaca ggttgtcctt cggatcgaat tcgaagtcca
     8461 gccaggaacc acggtaaggg atgatgcgcg cgttatacag cactttaccc gaagagtggg
     8521 ttttaccttt gtcggagtca aagaagacgc ccggactacg gtgcagctgg gaaacgataa
     8581 cacgctcagt accgttgata acaaaggtac cgttgtctgt catgagcgga atttcgccca
     8641 tgtagacttc ttgttcttta atgtctttta cggtgccttc cggcgcttcg cgctcataga
     8701 tcaccagacg cagtttaacg cgcagcggtg cggaataggt cacgccacgg atttgacatt
     8761 cctggacgtc aaacaccggt tcgccaaggc ggtagctgac gtattgcagc tcggaattac
     8821 cgctgtagct ctgaatcggg aatacggaac ggaaagctgc ttccagacca tactgccctt
     8881 caggatcttg ctcgataaat ttctgaaacg agtcaagctg gatagaaagg agataaggta
     8941 catccagaac ttgtggacgt ttaccaaaat ccttacgaat acgttttttc tcggtatagg
     9001 agtaaaccat agggttcctc agctcgctga caagtcgacc catctgtcca ttgagcggac
     9061 agtttgtgca acactatttt gttgaccgga aaatggaaca ctttccgcaa tgcctgttgc
     9121 tatcacgctt aaaccatttc attgcgattt acacagaacg gacgtcctgt cgcagtatat
     9181 taagtcgtcg atagaaacaa gcattgaaag gcacagcagt agtcaaacag tgtgaaacgc
     9241 tactggcgcc ttacagcgca aaaaggctgg tgactaaaaa gtcaccagcc atcagcctga
     9301 tttctcaggc tgcaaccgga agggttggct tatttaactt caacttcagc gccagcttct
     9361 tccagagctt ttttcagtgc ttctgcgtcg tctttgctca cgccttcttt cagagcagcc
     9421 ggtgcagatt ctaccaggtc tttagcttct ttcagaccca ggccagttgc gccacgtact
     9481 gctttgataa cagcaacttt gttagcgcca gcagctttca gaattacgtc gaattcagtt
     9541 ttttcttcag cagcttcaac cgggccagca gctacagcta cagcagcagc agcggaaaca
     9601 ccgaattttt cttccattgc agagatcagt tctacaacgt ccattacaga catagctgca
     9661 actgcttcaa tgatttgatc tttagtgata gacatttaaa ttgttcctga atatcagaat
     9721 aagtttatac gtaagcgaat gcgttaaaaa gataactgcg attaagcagc ttctttcgca
     9781 tcgcgtacag cagccagagt acgaaccagt ttgccagccg aagcttcttt catggttgcc
     9841 atcaggcgtg caattgcttc ttcgtaggtc ggcagagttg ccaggcggtc gatctgagac
     9901 gccgggatca gctcaccttc aaaggcagcg gctttgacct caaattttgc attcgctttc
     9961 gcgaactctt tgaacagacg agcagcagcg cccgggtgtt ccatagagta tgcaatcagg
    10021 gtcggaccaa caaacgcgtc tttcaggcac tcgaacggag taccttcaac agcacggcgc
    10081 agcagggtgt tacgaacaac acgcatgtat acgccagctt cgcgacctgc tttacgcagt
    10141 tcagtcattt tatctacagt tacgccacgg gaatccgcaa ctactgcaga cagcgcgcct
    10201 ttggctactt cgctgacttc agcaacaatc gcttgtttgt cttgaagatt taaagccatt
    10261 agctttgctc ctggatgttt gccagagaaa atctctggaa ctcacttcac tcctccaaac
    10321 ggagagagcg tcttaattac ggtgagcaga aacaagccag aatataaaag aataatctta
    10381 gcgttctgtc accgtctacg caggggatta agtttcttgc gaaactcctg cggtcttcga
    10441 cggaggcctg gataggccag gctccaacga acaaatcttt tctatccgtc gctattcaac
    10501 ttgtggcggc gttggcttcc ttcattcgca ccagtcacat agttagctat gctcctggcg
    10561 actcactcag ttgccgcctt gccacaaccc gaatatctcg gatatacgtc tgcattaagc
    10621 attatacgtg ggggtaagat tgtagacaaa atcaccgccc acgtaaaggc attagtttac
    10681 agaagcgctc aggccagcct ggtcaactgc aacacctgca cccatggtgg tggagatgct
    10741 aactttcttg atgtacacgc ctttcgcctg agtcggtttt gcttttttca gcgcaaccag
    10801 cagagcttcc aggttttctt tcagtttgtc agcgtcaaag tccactttac cgatggtggt
    10861 gtggatgatg ccgtttttgt cgttacggta acgaacctgg ccagctttag cgtttttaac
    10921 cgcttcagca acgttcggtg ttacagtacc cactttcggg tttggcatca ggccgcgcgg
    10981 acccagaacc tggcccagct ggccaacaac gcgcattgca tccggagaag caataacaac
    11041 gtcaaagttc atttcgcctt tcttgatctg gtcagccaga tcttccatac ctaccagttc
    11101 tgcgcctgca gctttagcag cttcagcgtt tgcaccttgg gtaaatacgg ctacgcgaac
    11161 ggaacggcca gtaccgtgcg gcagtacagt tgcaccacgt acgttctggt cagatttacg
    11221 agcgtcgatg ccgaggttaa cagctacgtc cacgctttct acgaatttag cagtcgccag
    11281 ctctttcagc agtgcgatag cttcgttgat gtcgtactgt ttggttgcat caactttctc
    11341 gcggataaca cgcatgcgct tggtcagttt agccatttct tagtcctcca ctaccaggcc
    11401 catggaacgt gcagtacctt cgatggagcg agtcatcgct tcaatgtcgg caccagtcat
    11461 gtcggcagct ttggtctgcg cgatttcctg cagctgagcg cgggaaattt tacccacttt
    11521 gtctttgttc ggcttaccgg aaccagactt gataccagcc gcttttttca gcagaactgc
    11581 tgccggcggg gtcttggtaa cgaaagtgaa agaacggtca gcgtaaacgg tgattactac
    11641 cggaatcggc agaccttttt cgatggaatc agtttttgcg ttgaacgctt tgcagaattc
    11701 catgatgttt acgccctgct gacccagagc cggacctact ggcggactcg ggttagccat
    11761 accagctgca acctgcagct tgacataggc ttgtactttc ttagccatta taaattcctc
    11821 aagttgggta ataacgcctc tgagaggctc cccgtgatat aaaaaatcgt ttttacgggc
    11881 aaggcccata aaaacaaaag gcgcgaaatt gtattccaat ctcgcgcctt gtgcaacgat
    11941 taaatcgccg cttttttgat cgctgggtta ggctttttca acctggctga agtccagctc
    12001 taccggggtc gcacgaccga agatagaaac agacactttc agacgagatt tctcgtaatc
    12061 cacttcttca acaacaccgt tgaagtcagc gaacggacca tcattaacac ggaccatttc
    12121 acccggttca aacagcgttt tcggacgcgg cttatcacca acctgctgca ggcggttcat
    12181 aatcgcatcg acttctttat cgctgattgg cgcaggacga tcggaagtac cgccgatgaa
    12241 gcccatcact cgcggtacgc tgcgcaccag gtgccagctc gcgtcgttca tcaccatctg
    12301 aacgaggacg tagccaggga agaatttacg ttcgcttttg cgacgctgac cgccacggat
    12361 ttcaaccact tcttcggttg gtaccatgac ttcaccaaac aaatcttcca tgttgtgtaa
    12421 tttgatatgc tcacgcagcg acgttgctac gcggccttca aaaccggaaa acgcctgaac
    12481 gacgtaccag cgctttttag gagcttcaga catctcagaa cctcaggcca gtgataaagg
    12541 ataccaggcg aaccagaata ccatccagtc cccacaggat cagtgacatt actgcggtaa
    12601 ccgcagccac aatcagcgtg gtgtgcaatg tttcctggcg agtcggccaa atgaccttac
    12661 ggacttcggt acgcgcttca cgggcaaaag caacggtagc tttacctttt gtcgttaaca
    12721 gcgcgacacc acccgctgca gcaatcagaa ttactacggc cagcgcacgc agcggcagca
    12781 taatgtcgcg ataaaggtag ttgccgacaa tcgccaccaa gagcaatgcc accacaacga
    12841 cccacttcat cgcttccagg ccgcgcccgc ttccttgagc ttcggtattc gcactcataa
    12901 accaacctgt cagaagtttt ctacaaacat tttcaccccg cgatcgcgag gcaaaccaaa
    12961 tcgaaacgcg tattagcttt tcggattata cgccctcaac agagcctgtc tcagcaatga
    13021 ttatgacaaa gaaaatcact gatgagccag gttctggtac gaaagcgtgc aaaaagggca
    13081 tcaaatgatg cccttttagt gcgcattgcg tcaaatgtta tcggcaatta gctcagaact
    13141 tttgc
//
LOCUS       DADMHC010000112        13118 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.112, whole genome shotgun sequence.
ACCESSION   DADMHC010000112 DADMHC010000000
VERSION     DADMHC010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13118
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.112"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(81..632)
                     /locus_tag="JNZ57_002602"
     CDS             complement(81..632)
                     /locus_tag="JNZ57_002602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000996729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1440 domain-containing protein"
                     /protein_id="HAY8828786.1"
                     /translation="MAINGLFVRTDPQRRRYGVALLVGVLSGIISAFVKWGAEVPLPP
                     RTFSGGRDEFNPPYIFLRDYLGIDPTQTVYTFSEHIINPVMVTHIIFSLVFAIGYCIV
                     AEIFPKVKLWQGILAGLIVTVAVHGIFCPVLNLTPPLTQLPFDEYASEILGHIFWFWI
                     IEIMRRDLRNRITHEPDPEVAIR"
     gene            complement(729..1415)
                     /locus_tag="JNZ57_002603"
     CDS             complement(729..1415)
                     /locus_tag="JNZ57_002603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase UlaF"
                     /protein_id="HAY8828787.1"
                     /translation="MQKLKQQVFEANMDLPRYGLVTFTWGNVSAIDRERGLVVIKPSG
                     VAYETMKADDMVVVDMSGKVVEGKYRPSSDTATHLELYRRYPSLGGIVHTHSTHATAW
                     APAGLAIPALGTTHADYFFGDIPCTRGLSEEEVQGEYELNTGKVIIETLGDAEPLHTP
                     GIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARSINPQLNHIDSFLMNKHFMRK
                     HGPNAYYGQK"
     gene            complement(1415..2269)
                     /locus_tag="JNZ57_002604"
     CDS             complement(1415..2269)
                     /locus_tag="JNZ57_002604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase UlaE"
                     /protein_id="HAY8828788.1"
                     /translation="MLSKQIPLGIYEKALPAGECWLERLRLAKTLGFDFVEMSVDETD
                     ERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKA
                     IQFAQDVGIRVIQLAGYDVYYQEANNETRRHFRDGLKESVEMASRAQVTLAMEIMDYP
                     LMNSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPG
                     VFKNVPFGEGVVDFERCFETLKQSGYCGPYLIEMWSETAEDPAAEVVKARDWVKARMA
                     KAGMVEAA"
     gene            complement(2279..2924)
                     /gene="ulaD"
                     /locus_tag="JNZ57_002605"
                     /pseudo
     CDS             complement(2279..2924)
                     /gene="ulaD"
                     /locus_tag="JNZ57_002605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313199.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-L-gulonate-6-phosphate decarboxylase
                     UlaD"
     gene            complement(2938..3402)
                     /gene="ulaC"
                     /locus_tag="JNZ57_002606"
     CDS             complement(2938..3402)
                     /gene="ulaC"
                     /locus_tag="JNZ57_002606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIA"
                     /protein_id="HAY8828789.1"
                     /translation="MKLRDSLAENKSIRLQAEAETWQDAVKIGVDLLVAADVVEPRYY
                     QTILDAVEQHGPYFVLAPGLAMPHGRPEEGVKKTGFALVTLKKPLEFNHEDNDPVDIL
                     ITMAAVDANTHQEVGIMQIVNLFEDEENFDRLRACRTEQEVLDLIDRTNAAA"
     gene            complement(3412..3717)
                     /gene="ulaB"
                     /locus_tag="JNZ57_002607"
     CDS             complement(3412..3717)
                     /gene="ulaB"
                     /locus_tag="JNZ57_002607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710059.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIB"
                     /protein_id="HAY8828790.1"
                     /translation="MTVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEY
                     KSELSGADIIIASTHIAGEITVTGNKYVVGVRNMLSPADFGPKLLEVIKAHFPQDVK"
     gene            complement(3733..5084)
                     /gene="ulaA"
                     /locus_tag="JNZ57_002608"
                     /pseudo
     CDS             complement(3733..5084)
                     /gene="ulaA"
                     /locus_tag="JNZ57_002608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001669289.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
     gene            5474..6538
                     /gene="ulaG"
                     /locus_tag="JNZ57_002609"
     CDS             5474..6538
                     /gene="ulaG"
                     /locus_tag="JNZ57_002609"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003856017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ascorbate 6-phosphate lactonase"
                     /protein_id="HAY8828791.1"
                     /translation="MSKVKSITRESWILNTFPEWGSWLNEEIEQEQVAPGTFAMWWLG
                     CTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVL
                     DPFAIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKER
                     CIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPG
                     GSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKV
                     VIPFHHDIWSNFQAAPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWPLDKDNLEYHY
                     PRGFDDCFTIEPDLPFKSFL"
     gene            6646..7401
                     /gene="ulaR"
                     /locus_tag="JNZ57_002610"
     CDS             6646..7401
                     /gene="ulaR"
                     /locus_tag="JNZ57_002610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator UlaR"
                     /protein_id="HAY8828792.1"
                     /translation="MTEAQRHQILLEMLAQLGFVTVEKVVERLGISPATARRDINKLD
                     ESGKLKKVRNGAEAITQQRPRWTPMNLHQAQNHDEKVRIAKAASQLVNPGESVVINCG
                     STAFLLGREMCGKPVQIITNYLPLANYLIDQEHDSVIIMGGQYNKSQSITLSPQGSEN
                     SLYAGHWMFTSGKGLTAEGLYKTDMLTAMAEQKMLSVVGKLVVLVDSSKIGERAGMLF
                     NRADQIDMLITGKNANPEILQQLEAQGVSILRV"
     gene            complement(7398..8147)
                     /gene="yjfP"
                     /locus_tag="JNZ57_002611"
     CDS             complement(7398..8147)
                     /gene="yjfP"
                     /locus_tag="JNZ57_002611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HAY8828793.1"
                     /translation="MIEIESRELADIPVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYS
                     YFAVVLAQAGLRVIMPDAPDHGSRFSSDEARRLNQFWQILLQSMQEFTTLRAAIAEEN
                     WLLDDRLAVGGASMGAMTALGITARHPTVKCTASMMGSGYFTSLARSLFPPLIPETAA
                     QQNEFNNIIAPLAEWEATNHLEQLGDRPLLLWHGLEDDVVPADESLRLQQALSETGRD
                     KLLTCSWQPGVRHRITPEALDAAVTFFRQHL"
     gene            8329..8658
                     /gene="bsmA"
                     /locus_tag="JNZ57_002612"
     CDS             8329..8658
                     /gene="bsmA"
                     /locus_tag="JNZ57_002612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313192.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm peroxide resistance protein BsmA"
                     /protein_id="HAY8828794.1"
                     /translation="MVSRKRNSVIYRFASLLLVLMLSACSALQGTPQPAPPVTNHPQE
                     IRRDQTQGLQRIGSVSTMVRGSPDDALAEIRAKAVAAKADYYVVVMVDETIVTGQWYS
                     QAILYRK"
     gene            8807..9082
                     /gene="yjfN"
                     /locus_tag="JNZ57_002613"
     CDS             8807..9082
                     /gene="yjfN"
                     /locus_tag="JNZ57_002613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418609.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease activator YjfN"
                     /protein_id="HAY8828795.1"
                     /translation="MKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVS
                     NISGDPQDVERIVALKADEQGASWYRIITMYEDQQPDNWRVQAILYA"
     gene            complement(9199..10824)
                     /locus_tag="JNZ57_002614"
     CDS             complement(9199..10824)
                     /locus_tag="JNZ57_002614"
                     /EC_number="1.3.8.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418608.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HAY8828796.1"
                     /translation="MHWQTHTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLA
                     SIGQQLGTAESLELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHN
                     LAWEEDARSGAFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPL
                     LSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS
                     VPQSDAHLVLAQTTGGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDA
                     IGWLLGQEGEGIRLILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQ
                     PLMCHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWARLFTPAAKFVICKRGMPF
                     VAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLS
                     EAFVEVKGQDRYFDRAVRRLQQQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQ
                     AWCQVMLDTRGGVRLSEQIQNDLLLRATGGVCV"
     gene            complement(10908..11966)
                     /locus_tag="JNZ57_002615"
     CDS             complement(10908..11966)
                     /locus_tag="JNZ57_002615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HAY8828797.1"
                     /translation="MLRHNVPVRRDLDQIAANNGFDFHIIDNEIYWDESRAYRFTLRQ
                     IEEQIEKPTAELHQMCLEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSLYGRM
                     DFAWCGNAPVKLLEYNAIQERLISRFSELYSREPFYFCCCQDTDEDRSTVLYLQDCAQ
                     QAGQESRFIYIEDLGLGVGGVLTDLDDNVIQRAFKLYPLEWMMRDDNGPLLRKRREQW
                     VAPLWKSILSNKGLMPLLWRFFPGHPNLLASWFEGEKPQIAAGESYVRKPIYSREGGN
                     VTIFDGQNNVVDHADGDYADEPMIYQAFQPLPRFGDSYTLIGSWIVDDEACGMGIRED
                     NTLITKDTSRFVPHYIAG"
     gene            complement(11969..12607)
                     /locus_tag="JNZ57_002616"
     CDS             complement(11969..12607)
                     /locus_tag="JNZ57_002616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 domain-containing protein"
                     /protein_id="HAY8828798.1"
                     /translation="MARKRKSRNNSKIGHGAISRIGRPNNPFEPRRNRYAQKYLTLAL
                     MGGAAFFVLKGCGDSGDVDNDGDGTFYSTVQDCIDDGNNADICARGWNNAKAAFYADV
                     PKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASR
                     PVWRNTSGDYSWRSGSGKKESYSSGGFTTKKASTVSRGGYGRSSSARGHWGG"
     gene            complement(12617..13015)
                     /locus_tag="JNZ57_002617"
     CDS             complement(12617..13015)
                     /locus_tag="JNZ57_002617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF350 domain-containing protein"
                     /protein_id="HAY8828799.1"
                     /translation="MHILDSLLAFSAYFFIGVAMVIIFLFIYSKITPHNEWQLIKNNN
                     TAVSLAFSGTLLGYVIPLSSAAINAVSIPDYFAWGGIALVIQLLVFAGVRLYMPALSE
                     KIINHNTAAGMFMGTAALAGGIFNAACMTW"
BASE COUNT         3336 a         3582 c         3196 g         3004 t
ORIGIN      
        1 cgctagcacc aggtataacc aacgaaacat tgccatagtt tgctttgccc ccttcgcagg
       61 gggctttttt atacggttat tcaccggatt gcgacttccg gatctggctc atgagtaatg
      121 cgattacgta agtcgcggcg cataatttct attatccaga accagaaaat atgccccagg
      181 atttcagagg catattcgtc aaaaggcaat tgagtgagcg gcggcgttaa attcagcacc
      241 gggcaaaata taccgtggac tgccactgtc acaataagcc ctgctaatat cccctgccat
      301 aatttcactt tcgggaaaat ttccgcgaca atacaatacc ctatcgcaaa aaccagtgag
      361 aagatgatat gcgtcaccat caccgggttg ataatatgtt ccgagaatgt atacacagtt
      421 tgggttgggt cgatacctaa ataatcccgt agaaagatat acggcgggtt aaattcatcg
      481 cgaccaccgg aaaatgtgcg cggtggcaag gggacttccg ctccccattt aacaaatgct
      541 gaaataattc ctgaaagtac acccacaagt aacgcaacgc catagcggcg acgttgcgga
      601 tccgttctga caaacaatcc attgatagcc ataaaaacac ctgttgttta tacgattttt
      661 taactgaagc ggccccggaa tcagaccaat tacatcccgc aggaggtaat aattccgggg
      721 cgcactgctt acttctgccc gtaataggcg ttaggaccgt gcttacgcat gaagtgttta
      781 ttcatgagga agctgtcgat gtgattcagt tgtgggttaa tactgcgcgc aatccacgcc
      841 attttcgcca cttcttccat caccaccgcg ttatgcaccg cgtcgtgggc atctttcccc
      901 caggcgaacg gcccgtgctg atacaccaca attcccggcg tatgcagcgg ctcggcgtca
      961 cccagcgttt cgataatcac tttgccggtg ttcagttcat actcgccctg cacctcttct
     1021 tcgcttaatc cacgcgtaca cgggatgtcg ccaaagaagt agtcggcgtg cgtggtgcct
     1081 aacgccggga tcgccagccc cgccggcgcc catgcggtgg catgagtgga atgggtatgg
     1141 acaatgccgc cgagcgacgg gtaacgacgg tagagttcaa gatgcgtcgc ggtgtcagaa
     1201 gacgggcgat acttcccttc taccaccttg ccgctcatat cgaccaccac catatcgtct
     1261 gctttcatgg tttcgtaggc aacgccgctg ggcttgatca ccaccagccc gcgttcgcgg
     1321 tcgatagcgc tgacgttgcc ccaggtaaag gtcaccagcc catagcgcgg cagatccatg
     1381 ttggcttcaa acacctgctg ttttagcttt tgcattatgc cgcctccacc atgcctgctt
     1441 tggccatgcg cgctttcacc caatcacgcg ctttcaccac ttctgccgcc gggtcttccg
     1501 ccgtttcgct ccacatctca atcaggtacg gcccgcaata gccactctgt ttgagcgttt
     1561 cgaagcaacg ttcgaaatcc accacacctt cgccaaatgg cacgtttttg aagacgcccg
     1621 gtttggtgtc tttcacatgc accgcgacga tatgcccgat tccggcctgc aactccatct
     1681 gcacatcgtt gtcccacgcc gacaggttgc cgatatctgg gtagagctgg aaccacgggt
     1741 tgttgagata gtgcgcgtaa cccagcgcct tgctgatgga gttcatcaac ggataatcca
     1801 tgatctccat cgccagcgtc acctgcgcgc ggctcgccat ctcaacgctc tctttcaggc
     1861 cgtcacggaa atgacgacgc gtttcgttat tggcttcctg atagtaaacg tcatagcccg
     1921 ccagctggat cacgcgaatg ccaacgtcct gggcgaactg gatggcttta cgcataatct
     1981 ccagcccctg cgcccgcacc gcgtcatctt cgctgcccaa cgggaaacga cgatgggcag
     2041 aaaggcacat ggacggcaca cgcacgccgg tttcaacaat cgcattcacc agcgccagac
     2101 gctgctcgcg gctccagtcg aggcgcgaca ggcgctcgtc agtttcatct accgacatct
     2161 cgacaaaatc gaagcccaac gtttttgcca gtcgcaggcg ttccagccag cactccccgg
     2221 cggggagcgc tttttcatag atgccaagcg ggatttgttt ggacaacata tccgctcctt
     2281 agccccacag ttcggcgatg gaacgtttga actgacgcgc ggcttcaacc ggagaagcgg
     2341 catcacggat gctgcgaccg gcgataaaca catgaattgg aatgcctttg aacagcggca
     2401 gatcttccag caccaggcca ccggtgacgg tgactttgaa gcccatatcg gaaagacgtt
     2461 tgatcgcagt gatatcggct tcaccccacg ccagcggcct gcgcgtcacg gctgcggtga
     2521 taaaccacct gctgaatacc tgcgtcgcgc cactgttgcg cctgttccca ggtccagtaa
     2581 ccggtcagtt cgatctgcac gtcgccgtta aactcttttg ctacgtccag cgcacctttg
     2641 gcggtgttga tatccgcaca acaaatcacg gtcacccagt cagcgttggc ttcgaagcac
     2701 atacgagaaa gaattttgcc cgcatcggca attttggcgt ctgccagcac gattttgtgc
     2761 gggtagagcg ctttcagatc gcgaaccgca cgcacgcctt cgcccacgca cagaatggta
     2821 cccacttcga taatgtcgac ttcttcggca atcaggcgag tggtttcgta ggcgctatcc
     2881 atagtctggt tgtccagcgc gacttgcaac atcggtaatg acatcttcaa ttccttctta
     2941 agctgccgcg ttggtgcggt caatgagatc cagtacttcc tgctcggtac ggcaggcacg
     3001 taaacggtcg aaattttctt catcttcaaa caggttgacg atctgcatga tgcccacttc
     3061 ctggtgcgtg ttggcatcga ccgccgccat ggtgatgagg atatccaccg ggtcgttatc
     3121 ttcgtggttg aactccagcg gctttttcag cgtcaccagc gcaaaaccgg ttttcttaac
     3181 gccctcttcc gggcgaccgt gcggcattgc caggcctggt gcgagcacaa agtacggacc
     3241 gtgctgttca accgcatcca gaatcgtctg gtagtaacgc ggctcgacaa catccgccgc
     3301 caccagcagg tcaacgccga tttttactgc gtcctgccat gtctcagctt cagcctgcag
     3361 gcggatggat ttattctccg ccagcgaatc acgtaatttc atggcgcgtc cttacttcac
     3421 atcctgcggg aaatgcgctt tgatcacttc cagcagtttc gggccaaagt cggcaggaga
     3481 gagcatgttg cgcacgccaa ccacgtattt gttgccggtc acggtgattt cgcccgcaat
     3541 gtgcgtagaa gcgatgatga tatccgcgcc gctcaactcg cttttgtatt cgccaaccgc
     3601 gcagctattt accgtgtggt caatgtttga ttgggttaaa aactggtcca ctttcatctt
     3661 catgatcatg gaactgcctt gtccgttgcc acacacagcc agaatacgta cggtcataat
     3721 caaaactcct tattaagcag actgttctgc cagttgtttt tctgcatctt cttctgcgcg
     3781 cagtgcgcgg ccagcgaaga acatataagc cagtgcaatt acaatgatga cggccataaa
     3841 ggcgataccg atggagaaga agccctgcat catcggcggt gccagaatcg accagtccgc
     3901 catgcccatc caggcgctca taccggtgag tttcaccgcc cagacgcagc caaagatttc
     3961 aatcatcccc atcaccagac atatcttcag cgccgcacgc cagccgccga agtggttagc
     4021 gaacacgccg atggtggcgt tggagaagaa catcgggata aagccgggaa taatcaggat
     4081 cgaggaaccg caggcgacca ggatgccaac cgcaatcagc tgaccgatgg tgccccacat
     4141 aaagccccaa accacggcgt tcggcgcgaa gctatagata gccgcacagt caatcgccag
     4201 aaccgcacca gggatcaggc gctgggagat accgttaaat gcttcagaga gttccgccac
     4261 aaacatgcgc acccctgaat gatgatgaag atcgccaccg cgaaggagaa accagtttgc
     4321 aggatgtaca ccgtccagtt cactttgcct gccatcgcct gcacggtgtc gataccgaag
     4381 gagagcagaa tggcaccaaa gaagatggtc atcacaatcg ccgtggagac gatgttgtcg
     4441 tggaaaatat tcagccagcc tggcagtttg aggtcttcaa cgctttcctc ttttttgccg
     4501 aggaacggcg caactttata ggcaatccat gatgcaaact gttgctggtg accgatggag
     4561 aaaccgcagc cgtccgtcac ttcctgagtc ggcttgtaca tcatgttgga ggtaatgccc
     4621 cagtagagcg aaaccagaat cgccgtgcag ataatggttg tccacatgga gtagccgaaa
     4681 ataaacaacg taacggcaat cagccccgcc tgctggaaca tgatatgacc agtcagcatg
     4741 atggtacgaa taccggtaat gcgacgcagc agcacgtaac agatgttcag cgccagcgct
     4801 aacaacaccg cgtaacctac ccagctatag gcatcgccca tgcggtcgat ggttgccatc
     4861 atcgacgcgt aagtatcgga aattgcgccg ttaatgccgt agacttcgga cattttcgcc
     4921 accaccggtt tgaaggtgct ggtgaggatg ccggaccctg cctgcaacaa catgaaacca
     4981 attatggttt taatcgtgcc tttaataata acgctgacac ttttgcgcag taggatgtag
     5041 cccagacagg tcacaatacc cagcaacaac ggggcattgg tcatgacctg gttaaaaaac
     5101 acggtaaaga tgttgtagag acgatctcct gaagaagagg taaccgggta ttccgcacac
     5161 ccggaatgtt gtgcactcac tataattttc aaaagtaatc acaacaagat tatttatgat
     5221 taaatgtggc gcgacccgta aataattcca tacggataga gtgggattca cacaacgaaa
     5281 caattattta tttaaattca tttagttaat ttaactacac attccattaa atctttccac
     5341 actcaaaatc aacaacaact tccctggcaa aaagtcaaaa aatggtcatt gccttcctga
     5401 aaaaatagtg tcaggattaa tcaaaaccaa tcacatattg attcgaattg aactatcatg
     5461 aaggtaaatg gcgatgagta aagtgaaaag tatcacccga gaatcctgga tcctgaacac
     5521 tttcccggag tggggtagct ggctgaatga agaaattgaa caagagcagg tcgcccctgg
     5581 cacatttgcg atgtggtggc taggctgcac cgggatctgg ttgaaatcag aaggtggcac
     5641 caacgtttgc gttgatttct ggtgcggcac tggcaaacaa agtcacggta acccgttaat
     5701 gaaacagggt caccagatgc agcgcatggc tggcgtgaaa aaactgcagc caaacctacg
     5761 caccaccccg tttgttcttg atccgtttgc gattcgccag atcgacgcgg tactggcgac
     5821 tcacgatcac aacgatcata tcgacgttaa cgtcgctgct gccgtgatgc agaactgtgc
     5881 tgatgacgta ccattcattg gaccgaaaac ctgcgttgat ttgtggattg gctggggcgt
     5941 accgaaagag cgttgcatcg tggtcaaacc gggcgatgtg gtgaaagtga aagacattga
     6001 aattcatgcg cttgatgctt tcgaccgtac tgcactgatc accctgcctg ccgatcaaaa
     6061 agcggctggc gtactgccgg acggcatgga cgatcgcgcg gtgaactatc tgttcaaaac
     6121 gcctggcggc tccctgtatc acagcggcga ctcccactac tctaactatt atgcgaagca
     6181 cggtaacgaa catcagatcg acgtggcttt aggttcatac ggcgaaaacc cgcgcggtat
     6241 caccgacaaa atgaccagcg ccgatatgct gcgtatgggt gaagccctga atgcgaaagt
     6301 ggttatcccg ttccaccacg atatctggtc aaacttccag gccgctccgc aagagatccg
     6361 cgtgctgtgg gagatgaaaa aagatcgtct gaagtatggc ttcaagccgt ttatctggca
     6421 ggttggcggc aaatttacct ggccactgga taaagacaac ctcgagtacc actatccgcg
     6481 cggtttcgat gattgcttca ctattgaacc ggatctgccg ttcaagtcat tcctgtaatc
     6541 tgtcgtttat accggatagc gtggagaagt tcgcgctatc cggcgtagta tttcctggct
     6601 atttcaaata tcatctaaaa aaatcaaatt ttatcggaat agctcatgac tgaagcacaa
     6661 agacatcaaa tcctcctgga aatgctcgca caattgggct ttgtgaccgt tgagaaagtc
     6721 gttgagcgtc tgggaatttc gcctgccact gcgcgacgcg atatcaataa acttgacgaa
     6781 agcggcaaac tcaaaaaggt gcgcaatggc gcagaagcta ttacccaaca gcgcccgcgc
     6841 tggacgccga tgaatctgca tcaggcgcag aatcacgatg aaaaagtacg tattgctaaa
     6901 gcggcctcgc agctggttaa tccgggcgaa agcgtagtca tcaactgcgg ctccaccgcg
     6961 tttctgcttg ggcgggaaat gtgtggcaag ccagtgcaaa tcatcactaa ttatctaccg
     7021 ctggcaaatt acctgatcga tcaagaacat gacagcgtga tcattatggg tggacagtac
     7081 aacaaaagtc agtccatcac tttaagcccg cagggcagcg aaaacagtct ctatgccggg
     7141 cactggatgt ttaccagcgg aaaagggctg accgcagaag ggttgtataa aaccgatatg
     7201 ctgacagcaa tggcagagca gaagatgctg agcgtggtag ggaaactggt ggtactggtt
     7261 gatagcagta agattggcga acgcgcggga atgcttttta accgtgccga tcaaatcgat
     7321 atgcttatca ccggcaaaaa tgctaacccg gaaatcctgc aacaactgga agcgcaaggg
     7381 gtcagcattc tgcgtgttta aagatgctgg cggaaaaatg tcacggcagc atctaacgcc
     7441 tcaggcgtaa tgcggtgacg cacgcctggc tgccatgaac aggttagcag tttatcccgt
     7501 cccgtctcgc ttaaggcctg ctgcaaacgt agtgattcgt cggcaggcac aacgtcatcc
     7561 tcgaggccat gccacagcag tagaggtctg tccccaagtt gttccaggtg gtttgtcgct
     7621 tcccactctg ccagcggcgc gataatgtta ttgaattcat tctgctgtgc tgccgtttca
     7681 ggtatcagcg gtggaaacag tgaacgggcg agcgatgtaa aatagcccga tcccatcatg
     7741 ctggcggtac atttcaccgt ggggtggcga gcggtaattc ccagtgccgt catcgcgccc
     7801 atcgacgcgc caccgactgc cagacggtca tcaagcagcc agttttcttc ggctattgcc
     7861 gcacgtaaag tagtgaattc ctgcatactt tgtagcaaga tttgccagaa ttgatttaac
     7921 cgccgcgctt cgtcgctact aaaacggcta ccgtgatcgg gcgcatccgg catgatcacc
     7981 cgcaaaccag cctgcgccag cacaacggca aaatagctat acaccaggct ggatgaagta
     8041 aagccgtgat aaaaaattac gcacggtaac ggggtatctt tttgcccgac aggataagca
     8101 tgaagaacgg gaatatctgc cagctcgcgt gattctattt caatcatctg tctctccttt
     8161 ttgtctggta tgacatgaag aaatccttag cacaagtttc tgctggcggt attagttcat
     8221 aatgttgaga tgtgggttac gctttcgtca cgttttcatt cgaaaatcgc gtaccaggta
     8281 acaattcggg aacattcccc caaagttaaa ttaataaggc actacactat ggttagcagg
     8341 aaacgtaata gcgttattta ccggtttgcc agtttattat tggtgttgat gttaagtgcc
     8401 tgtagcgcac tgcaaggtac gccacagcca gcaccgccag taacgaacca tccgcaagag
     8461 attcgccgcg accagacgca agggttacag cgaataggta gcgttagcac gatggttcgg
     8521 ggttctccgg atgacgcatt agcagaaatc agagcaaaag ctgtcgctgc aaaagctgat
     8581 tattacgttg tcgtcatggt ggacgaaacc atcgtgacag gacagtggta ttcacaagcc
     8641 attttgtacc gtaaataaat cagacaactt acatagtcag ctttacattg ctttgcgtcc
     8701 ctatgcgttt acctgtgcac aataaattac cggctggaag cctgggcgtt tattaccgcg
     8761 atggaatgcc ctgcaacatg tggggaaacg aaaaatggag ctgacgatga aacaattact
     8821 tgcttcaccc tcgctgcaat tagtgactta tcctgcgagc gccacggcac agtctgcaga
     8881 attcgccagt gctgactgcg tgacgggcct gaatgaaata ggtcagatct cagttagcaa
     8941 tatttcaggg gatccgcagg acgtggaacg tatcgtggcg ttaaaggccg atgaacaagg
     9001 tgcgtcatgg taccgcatta ttaccatgta cgaagaccag cagcctgata actggcgcgt
     9061 acaggcgata ctgtatgcat gagtgtcatc tacagcaaat gaacaatgcc ggattcggcg
     9121 cgagcgcctt gtccggccta caattttcac atatttcatt gagttaatcg aaaccagcgt
     9181 cgcatcagtc gtatacgctt acacacacac tccccccgtc gcccgcagca ataaatcatt
     9241 ctggatctgc tctgacaacc gtacgccgcc gcgcgtatct aacatcacct gacaccacgc
     9301 ctgcgccatt ggcggagaag catatttcaa catttgcgca ccgcagccca gcaggaatag
     9361 ctgatgagta atctctcgcc ccagttcttc agctggctta cgcagctgct gctgtaaacg
     9421 acgaaccgcg cgatcaaaat agcgatcctg ccctttcact tccacaaatg cttccgacaa
     9481 taagtcgtat acgcccgctt gcttattgag aacgcgcaac acatccaggc acataatatt
     9541 gccggaacct tcccaaatac tgtttaccgg catctcccgg taaagccgcg gcagctcgct
     9601 ctcctcgcaa taaccaatgc cgcccagcac ctccatcgct tcggccacaa acggcatacc
     9661 tcttttgcag atcacaaatt ttgccgcagg cgtaaataaa cgcgcccaca gggcttcttt
     9721 ggcatcggca cgccggtccc acgctcgcgc aagacgaaac agcaacgccg tttgcccttc
     9781 aagctgaagt gccatgcgac ttaagacatg acacataagg ggctgttgga tcaatggatt
     9841 accaaaaaca tggcgttgat gtgcatgata aatcgccagc gaaaatgcac ggcgcatcat
     9901 ggcatggcta cccagggcgc aatcaaaacg cgtcatccca cccattttca ggatcagacg
     9961 aattccttcc ccttcctgcc ccaacaacca gccaatggca tcctgaaact ccacttcgca
    10021 actggcgtta gagcgattac ccagcttatc tttcagccgc tcgaggcgaa tcgcgttgcg
    10081 ttgcccatca ggcaaaaagc gcggcacaaa aaagcaggac aaaccgcccg tagtctgcgc
    10141 cagcaccaga tgcgcatcgc tttgcggcac cgagaaaaac catttatgcc ccaccagccg
    10201 ataagagcca tcttccagac gctctgcacg ggtggtgttg ctcatgacat cggaaccgcc
    10261 ctgcttttcc gtcattccca tgccaatcaa caaaccgcgt ttttgcccac ctggcaataa
    10321 gtgagaatcg tagcgatcgc tcagcagcgg cgtggtccag tcctgaaacg gcgtgggtaa
    10381 catctgtaac aacaatggcg tggcggcaaa ggtcatcgtt attggacata acgacccagc
    10441 ctcaacctgc gcatgtaaca taaaacgcgc cgcgcgcgcc acaaatgcgc cggagcgagc
    10501 gtcttcttcc caggcaagat tgtgcacccg attggtacat aacgcctgca tcagcaggtg
    10561 ccaggcgggg tgaaaacgca catcgtccag acggcgtcct tgcgcatcgt agcgcaataa
    10621 ttcaggcgga ttcacattcg ccagccgccc cagttcaaga gattcagccg ttcctaactg
    10681 ctgaccaata ctggctagaa aatcgctatc ccagccagca ccttcacgcg ttaccgcttc
    10741 acagagcgcg ccatcagaca ggtataagtt gctgttattt aatggtatag gttgattaaa
    10801 aacggtgtga gtttgccagt gcactgtgtc tccctccatc aatggcagtc acccttagta
    10861 tggtcactgc catggattcc tgacagaaag agattgctaa aacattctta tccagcaatg
    10921 taatgcggaa cgaaacgtga ggtgtctttg gtgatcagcg tgttatcttc acggatcccc
    10981 attccgcacg cttcatcatc gacaatccag ctaccgatga gtgtgtagct atcgccaaat
    11041 cgcggcagag gttgaaacgc ctggtagatc atcggttcat cggcgtaatc accatcagcg
    11101 tggtcaacga cgttattctg accgtcgaaa atggtgacgt ttccgccttc gcgtgagtag
    11161 atcggtttac gcacatagct ttcgccagcg gcaatctgcg gtttttcgcc ctcaaaccag
    11221 gatgcaagaa ggttaggatg accaggaaag aagcgccaaa gcagcggcat tagcccttta
    11281 ttactcaaga tacttttcca taacggcgcc acccattgct cgcgacgctt gcgcagcagc
    11341 ggaccgttat cgtcacgcat catccactcc agcggataca gcttaaatgc acgctggatg
    11401 acattatcat caagatcggt cagtacgccg ccgacgccca aaccgagatc ttcaatgtag
    11461 ataaaccgcg actcctgccc tgcctgctgg gcgcagtcct gcaagtacag cacggtactc
    11521 ctgtcttcat cggtgtcctg acagcagcaa aaataaaacg gttcccgact gtaaagctca
    11581 ctaaagcgcg aaatcaggcg ttcctgaatg gcgttgtact ccagcagctt caccggcgca
    11641 ttgccacacc aggcaaaatc catccggcca tacagcgaag gatcgcgtgc gcgccagctt
    11701 tcggcgatca catcccagta caacggcggg atcgccagtt gcgtcaggat ctcttcgtct
    11761 ttaaccgcgc gatccaccac ctcaaggcac atctgatgca gttccgcagt cggtttttcg
    11821 atctgctctt caatctggcg cagagtaaaa cggtaagccc gactctcgtc ccaatagatt
    11881 tcattgtcga tgatatgaaa gtcgaaaccg ttgttagcgg cgatctggtc cagatcccgt
    11941 cgcacaggaa cgttgtgtct cagcatgatt agcctcccca atgcccacgg gcgctggaag
    12001 aacgaccata gccgccgcgc gaaacggttg acgctttttt ggtggtaaag ccgcctgaag
    12061 agtaagactc ttttttgcca gaaccggagc gccaggagta atcaccggaa gtgttgcgcc
    12121 agacggggcg ggaagcaaat gaggatccgc cgctgttata gacgaacggc tcatcgcgat
    12181 ctttacgaat aacccggctt aacaaaaatc cagaaacgac cgggatccaa ctctgttcaa
    12241 cattgtcgta gtagcaattt tcgtacttag actgacaatt ctgctgagtc atattcttcg
    12301 gaacatcggc ataaaatgcc gctttggcgt tgttccagcc acgcgcgcaa atgtcggcat
    12361 tattaccgtc atcaatacaa tcctgcactg tcgaataaaa cgttccgtcg ccgtcgttat
    12421 cgacatcgcc actatcgcca caacctttca atacaaaaaa agcggcaccg cccattagcg
    12481 ccaacgttaa gtatttttgt gcgtagcgat tgcgacgcgg ttcaaaagga ttattcggtc
    12541 taccaatgcg actgatcgct ccgtgaccaa ttttactgtt atttcttgat ttgcgttttc
    12601 tggccatgat cgtccattac catgtcatac aagctgcgtt aaaaataccg ccagccagcg
    12661 cggcggttcc cataaacatt cctgctgcgg tattgtgatt aataattttt tcgcttaatg
    12721 cgggcatata aagtctgaca ccagcaaaaa cgagtaactg aatcaccagt gcaatcccgc
    12781 cccaggcgaa atagtctgga atactcaccg cattgattgc cgcactggat aaggggatca
    12841 cgtaacccaa caatgtaccg ctgaatgcca gtgacaccgc ggtattattg tttttgatta
    12901 attgccattc gttgtgcggt gtaattttgg agtagataaa cagaaaaata atcaccatag
    12961 ccacgccaat aaaaaaatag gcactaaagg caagaagtga atccagtata tgcattgtaa
    13021 acgtccttgt aattaaccaa taatatgaag tgatgtcagc gggatatcga cacccaacgc
    13081 gcgcgaaaat aaccactctg gctcgccggt aatgactc
//
LOCUS       DADMHC010000113        13094 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.113, whole genome shotgun sequence.
ACCESSION   DADMHC010000113 DADMHC010000000
VERSION     DADMHC010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13094)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13094)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13094
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.113"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            6..1634
                     /locus_tag="JNZ57_002618"
     CDS             6..1634
                     /locus_tag="JNZ57_002618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001381416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin family protein"
                     /protein_id="HAY8828800.1"
                     /translation="MFTAIIAVCILFIIGIIFARLYRRASAEQAFVRTGLGGQKVVMS
                     GGAIVMPIFHEIIPINMNTLKLEVSRSTIDSLITKDRMRVDVVVAFFVRVKPSVEGIA
                     TAAQTLGQRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENFVQGVQNTVAED
                     LSKNGLELESVSLTNFNQTSKEHFNPNNAFDAEGLTKLIQETERRRRERNEVEQDVEV
                     AVREKNRDALSRKLEIEQQEAFMTLEQEQQVKTRTAEQNARIAAFEAERRREAEQTRI
                     LAERQIQETEIEREQAVRSRKVEAEREVRIKEIEQQQVTEIANQTKSIAIAAKSEQQS
                     QAEARANLALAEAVSAQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVRAKAE
                     KEAAEMQAAAIVELAEATRKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQALPA
                     VIEKSVEPMKSIDGIKIIQVDGLNRGSAAGDANTGNVGGGNLAEQALSAALSYRTQAP
                     LIDSLLNEIGVSGGSLAALTSPLTSTTPVAENVE"
     gene            1873..1932
                     /locus_tag="JNZ57_002619"
     CDS             1873..1932
                     /locus_tag="JNZ57_002619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HAY8828801.1"
                     /translation="MMKLVIILIVLLLVSFAAY"
     gene            2249..2308
                     /gene="ibsE"
                     /locus_tag="JNZ57_002620"
     CDS             2249..2308
                     /gene="ibsE"
                     /locus_tag="JNZ57_002620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin IbsE"
                     /protein_id="HAY8828802.1"
                     /translation="MMKFVIILVVLLLLSFPTY"
     gene            complement(2428..3861)
                     /gene="hldE"
                     /locus_tag="JNZ57_002621"
     CDS             complement(2428..3861)
                     /gene="hldE"
                     /locus_tag="JNZ57_002621"
                     /EC_number="2.7.1.167"
                     /EC_number="2.7.7.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase/D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase HldE"
                     /protein_id="HAY8828803.1"
                     /translation="MKVTLSEFERAGVMVVGDVMLDRYWYGPTSRISPEAPVPVVKVN
                     TIEERPGGAANVAMNIASLGANARLVGLTGIDDAARALSKSLADVNVKCDFVSVPTHP
                     TITKLRVLSRNQQLIRLDFEEGFEGVDPQPLHERINQALSSIGALVLSDYAKGALASV
                     QQMIQLARKAGVPVLIDPKGTDFERYRGATLLTPNLSEFEAVVGKCKTEEEIVERGMK
                     LIADYELSALLVTRSEQGMSLLQPGKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAA
                     GNSLEEACFFANAAAGVVVGKLGTSTVSPIELENAVRGRADTGFGVMTEEELKLAVAA
                     ARKRGEKVVMTNGVFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGDSRPVNP
                     LEQRMIVLGALEAVDWVVSFEEDTPQRLIAGILPDLLVKGGDYKPEEIAGSKEVWANG
                     GEVLVLNFEDGCSTTNIIKKIQQDKKG"
     gene            complement(3909..6749)
                     /gene="glnE"
                     /locus_tag="JNZ57_002622"
     CDS             complement(3909..6749)
                     /gene="glnE"
                     /locus_tag="JNZ57_002622"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HAY8828804.1"
                     /translation="MKPLSSPLQQYWQTVVERLPEPLAEKSLSTQAKSVLTFSDFVQD
                     SVIAHPEWLTELESQSPQADEWQHYAAWLQEALSNVSDEAGLMRELRLFRRRIMVRIA
                     WAQTLALVTEESILQQLSHLAETLIVAARDWLYDACCREWGTPCNAQGEAQPLLILGM
                     GKLGGGELNFSSDIDLIFAWPEHGCTQGGRRELDNAQFFTRMGQRLIKVLDQPTQDGF
                     VYRVDMRLRPFGESGPLVLSFAALEDYYQEQGRDWERYAMVKARIMGDSEGVYANELR
                     AMLRPFVFRRYIDFSVIQSLRNMKGMIAREVRRRGLTDNIKLGAGGIREIEFIVQVFQ
                     LIRGGREPSLQSRSLLPTLSVIAALHLLSENDAEQLRVAYLFLRRLENLLQSINDEQT
                     QTLPSDELNRARLAWAMDFADWPQLTGALTAHMTNVRRVFNELIGDDESETQEESLSE
                     QWRELWQDALQEDDTTPVLAHLSEDDRKQVLTLIADFRKELDKRTIGPRGRQVLDHLM
                     PHLLSDVCAREDAAVTLSRITALLVGIVTRTTYLELLSEFPAALKHLISLCAASPMIA
                     SQLARYPLLLDELLDPNTLYQPTATDAYRDELRQYLLRVPEDDEEQQLEALRQFKQAQ
                     LLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWVQMVARYGKPNHLNDREGRG
                     FAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAMTDGEREIDGRQFYLRLAQRIMHLFN
                     TRTSSGILYEVDARLRPSGAAGMLVTSAEAFADYQKNEAWTWEHQALVRARVVYGDPQ
                     LTAHFDAVRREIMTLPREGKTLQTEVREMREKMRAHLGNKHRNRFDIKADEGGITDIE
                     FITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHL
                     ALQELPGHVSEDCFTAERDLVRASWQKWLVEE"
     gene            complement(6772..8073)
                     /locus_tag="JNZ57_002623"
     CDS             complement(6772..8073)
                     /locus_tag="JNZ57_002623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic triphosphatase"
                     /protein_id="HAY8828805.1"
                     /translation="MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETP
                     DNWLRGHDMGLRIRGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEV
                     WPNGELPADLASRVQPLFSTDFYREKWLVAVDDSRIEIALDQGEVKAGEFAEPICELE
                     LELLSGDTRAVLKLANQLVSQTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAK
                     ADVEQGLEAALELALAQWQYHEELWVRGNDAAKEQVLAAIGLVRHTLMLFGGIVPRKA
                     STHLRDLLTQCEATIASAVSAVTAVYSTKTAMAKLALTEWLVSKAWQPFLDAKAQSKM
                     SDSFKRFADIHLSRHAAELKSVFCQPLGDRYRDQLPRLTRDIDSILLLAGYYDPVVAQ
                     AWLENWQGLRHAIATGQRIEIEHFRNEANNQEPFWLHSGKR"
     gene            8315..8935
                     /locus_tag="JNZ57_002624"
                     /pseudo
     CDS             8315..8935
                     /locus_tag="JNZ57_002624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311965.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
     gene            8999..10237
                     /gene="cca"
                     /locus_tag="JNZ57_002625"
     CDS             8999..10237
                     /gene="cca"
                     /locus_tag="JNZ57_002625"
                     /EC_number="2.7.7.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused tRNA nucleotidyltransferase/2',3'-cyclic
                     phosphodiesterase/2' nucleotidase/phosphatase Cca"
                     /protein_id="HAY8828806.1"
                     /translation="MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGR
                     DFPVFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD
                     NGEIIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLTLM
                     REMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA
                     PARWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPA
                     GVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQR
                     VEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREEL
                     TRRRIAAVASWKEQRCPKPD"
     gene            complement(10394..11215)
                     /gene="bacA"
                     /locus_tag="JNZ57_002626"
     CDS             complement(10394..11215)
                     /gene="bacA"
                     /locus_tag="JNZ57_002626"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708867.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HAY8828807.1"
                     /translation="MSDMHSLLIAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGDT
                     AKTFEVVIQLGSILAVVVMFWRRLFGLIGIHFGRPLQHEGESKGRLTLIHILLGMIPA
                     VVLGLLFHDTIKSLFNPINVMYALVVGGLLLIAAECLKPKEPRAPGLDDMTYRQAFMI
                     GCFQCLALWPGFSRSGATISGGMLMGVSRYAASEFSFLLAVPMMMGATALDLYKSWGF
                     LTTGDIPMFAVGFITAFVVALIAIKTFLQLIKRISFIPFAIYRFIVAAAVYVVFF"
     gene            complement(11306..11674)
                     /gene="folB"
                     /locus_tag="JNZ57_002627"
     CDS             complement(11306..11674)
                     /gene="folB"
                     /locus_tag="JNZ57_002627"
                     /EC_number="4.1.2.25"
                     /EC_number="5.1.99.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708868.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional dihydroneopterin
                     aldolase/7,8-dihydroneopterin epimerase"
                     /protein_id="HAY8828808.1"
                     /translation="MDIVFIEQLSVITTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKS
                     DDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAV
                     ARAANVGVIIERGNNLKENN"
     gene            11779..12396
                     /gene="plsY"
                     /locus_tag="JNZ57_002628"
     CDS             11779..12396
                     /gene="plsY"
                     /locus_tag="JNZ57_002628"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HAY8828809.1"
                     /translation="MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGAT
                     NVLRIGGKGAAVTVLIFDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGF
                     KGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKP
                     QFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKFKRKREKDPE"
     gene            complement(12409..>13094)
                     /gene="ttdR"
                     /locus_tag="JNZ57_002629"
                     /gene_synonym="dan"
     CDS             complement(12409..>13094)
                     /gene="ttdR"
                     /locus_tag="JNZ57_002629"
                     /gene_synonym="dan"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-binding transcriptional activator TtdR"
                     /protein_id="HAY8828810.1"
                     /translation="VDDVTQIKTRPEGMIRIGCSFGFGRSHIAPAITELMRNYPELQV
                     HFELFDRQIDLVQDNIDLDIRINDEIPDYYIAHLLTKNKRILCAAPEYLQKYPQPQSL
                     QELSRHDCLVTKERDMTHGIWELGNGQEKKSVKVSGHLSSNSGEIVLQWALEGKGIML
                     RSEWDVLPFLESGKLVQVLPEYAQSANIWAVYREPLYRSMKLRVCVEFLAAWCQQRLG
                     KPDEGYQVM"
BASE COUNT         3160 a         3680 c         3282 g         2972 t
ORIGIN      
        1 cctggatgtt taccgcgatt attgccgtat gcattctgtt tattattgga attattttcg
       61 ccaggctcta tcgtcgcgct tcggcagagc aagcttttgt tcgtactggt ttaggtgggc
      121 aaaaagtggt gatgagcggt ggcgcaatcg tgatgccgat ctttcatgaa ataatcccca
      181 tcaatatgaa tactctgaag ctggaagtca gccgctcaac cattgatagc ctgattacga
      241 aagatcgtat gcgtgtcgat gtagtagtcg ctttctttgt acgggtaaaa ccgtctgtag
      301 aaggcatcgc cactgcggcg cagacgttgg ggcaacgcac gctatcacca gaagacttac
      361 gtatgttggt tgaagataaa tttgtcgatg ccctccgtgc aacagctgca caaatgacca
      421 tgcatgagtt acaggatacc cgcgagaact tcgtgcaggg agtacaaaat actgtcgcag
      481 aagacctgtc gaaaaacggt cttgagctgg aaagcgtttc acttaccaac tttaaccaga
      541 cctcgaaaga acatttcaat ccgaacaatg cctttgacgc cgaaggttta accaaactga
      601 ttcaggagac ggagcgccgt cgtcgcgaac gtaacgaagt tgaacaggat gtagaagttg
      661 cggtgcgtga gaaaaaccgt gatgcacttt cgcgcaagtt ggagattgaa caacaagaag
      721 cgtttatgac gcttgagcag gagcagcagg ttaaaacccg tactgccgaa cagaatgcac
      781 gtattgcggc ttttgaagct gaacgtcgtc gtgaagcaga gcagacgcga attctggctg
      841 aacgacaaat tcaggaaacg gagatcgagc gcgagcaggc cgtccgctca agaaaggttg
      901 aggctgaacg tgaagttcgt attaaagaga tcgaacagca gcaggtcacc gaaatcgcca
      961 accagacgaa atcgatcgct attgccgcca aatcggaaca acagtcccag gcagaagcgc
     1021 gtgctaacct tgcactcgca gaagcagtaa gtgcgcaaca aaacgtagaa accactcgcc
     1081 agaccgcaga agccgatcgt gctaaacaag ttgccctaat cgctgccgcg caggatgcag
     1141 aaaccaaagc ggttgaactg accgtgcggg cgaaagcaga aaaagaagcc gcagagatgc
     1201 aggcggcggc tatcgttgag ttagccgaag ctacacgtaa aaagggtctg gcggaagcag
     1261 aagcacaacg tgcgctgaac gatgctatca acgtactttc tgatgaacaa accagcctta
     1321 aattcaaact ggccttgttg caggcgctac ctgcggtaat agaaaaatcc gttgagccga
     1381 tgaaatctat tgacggtatc aagattattc aggtcgatgg tctgaatcgt ggcagcgctg
     1441 cgggtgatgc aaacacgggt aatgtggggg gcggaaacct ggcggaacaa gcattatcag
     1501 ccgctctctc ttaccgcaca caggcaccgc tgattgactc cttgctcaat gaaattggcg
     1561 tttcaggcgg ctcactggcg gcattgactt cacccttaac ctcaacaact cccgtcgccg
     1621 aaaacgtaga ataaattttc agctatgaac gtccctggca caaaaagccg gggatttttt
     1681 atatctgcgt tccgctaaaa actgcaaatg atcaggtcgt tgcaacgttt tgcgtgaccg
     1741 ctcggggaag gcaaaactgc ctctgggaaa gcgttgcgcg aggtccggcg ctcatcaaca
     1801 atcggggagt cagcaaaggg ctgaaacggg aaagcccctc ccgaggaagg ggccttacag
     1861 aaggaaaggg ttatgatgaa gctcgtcatc atactgattg tgttgttact cgtaagtttc
     1921 gcagcttatt aacagccaat cagagggggg agaaatcctc cctcaccctt gttcctttac
     1981 tttaggttga aaaaaaatca gcgtcaagaa ggtttcatta acacatatcc ctggcccaaa
     2041 aagccgggga ttttttatat ctgcgttccg ctaaaaggtg caaatgctca ggacgttgca
     2101 gcgttttgcg tgaccgctcg gggaaggcaa aactgcttca gggaaagcgt tgcgcggggt
     2161 ccggcgctca tcaacaatcg gggagtcagc aaggggctga aacgggaaag cccctcccga
     2221 ggaaggggcc ttatagaagg aaagggttat gatgaagttc gtcatcatac tggttgtgtt
     2281 gttactgtta agtttcccga cttactaaca actgatcaga ggggggagaa atcctccctt
     2341 acccttgttc ctttacttta ggttgaaaaa acaacagcgt caataggcct gcctgctacg
     2401 aagcgagatc tgtgaaccgc tttccggtta gcctttttta tcctgttgga tcttcttgat
     2461 gatgttagtg gtcgagcaac cgtcttcgaa gttgagcacc agcacttcgc cgccgttggc
     2521 ccagacttct ttactcccgg cgatctcttc tggtttatag tcgccgccct tcaccagtaa
     2581 atctggcagg atcccggcga tcaagcgctg cggcgtgtct tcttcaaacg acaccaccca
     2641 gtcgaccgct tccagtgcgc ccagcacaat catacgctgt tcgagcgggt taacggggcg
     2701 ggaatcccct ttcagccgtt tggtggaggc atcgctgttc acagcgacaa tcagacggtc
     2761 acccagtttg cgagcatttg ccagatagga gacgtgcccg gcgtgcagga tgtcaaagac
     2821 accgttggtc attaccacct tttcgccgcg tttacgcgct gccgctacgg ccagcttcag
     2881 ttcctcttcg gtcatcacgc caaagccggt atctgcgcgc ccacgcactg cattttccag
     2941 ctcgatcggc gaaaccgtgg aggttcccag tttgccgacc accacgccag ccgccgcatt
     3001 ggcaaagaag caggcttctt ccagcgaatt acccgctgcc agcgttgccg ccaggacgcc
     3061 aatcaccgtg tcgcccgcac cggtaacgtc atacacttcc tgcgcctggg ttggcatatg
     3121 cagcggcgct ttacccggtt gcagcagcga cataccctgt tcggaacggg tcactaacag
     3181 agccgagagt tcgtaatcgg caatcagttt catgccgcgc tcaacaatct cttcttcggt
     3241 cttacattta ccgacaacag cttcaaattc cgagagattc ggcgttaaca gcgtagcgcc
     3301 gcggtagcgc tcaaaatcgg taccttttgg atcaatcagc accggaacgc ccgctttacg
     3361 cgccagttgg atcatctgct gtacgcttgc cagcgcacct ttggcgtagt cagaaagcac
     3421 cagcgcgcca atcgaactca gcgcctgatt aatccgctcg tgcagcggct gcggatcaac
     3481 gccttcgaaa ccttcttcga aatccagacg gatcagctgt tggttgcggg aaagtacccg
     3541 taatttggtg atggtcggat gcgtcggtac agaaacgaag tcgcatttga cgttgacgtc
     3601 ggccagagat ttactcagcg cgcgcgctgc atcgtcaatg cccgtcaacc cgaccaggcg
     3661 tgcattagca ccgagagaag cgatattcat cgccacgtta gccgcgccgc ccggacgttc
     3721 ttcgatggta ttcactttaa ccacgggcac cggcgcttcc ggcgagatac ggctggtggg
     3781 accgtaccag taacgatcca gcattacatc accaaccacc atcactcctg cacgttcaaa
     3841 ctctgacagc gttactttca ttcctgtctc ctgagagatt caaaatttgc gcgcgataat
     3901 accatacttc attcttccac cagccacttc tgccagcttg cccgcaccag atcacgctct
     3961 gcggtgaagc aatcctccga cacatggccc ggcaattcct gtaatgccag atgatgaagt
     4021 tcatcgcgca gcgtcgtgta agcacgggtc agcgccatcg cttcctgctc ttccataatg
     4081 tcgttttgcg ccagcagctc cagaatacgc acgttgtctg accagcgcgt taacttcggt
     4141 ttttcatgag cgtagcgcaa caccagatat tgggtaataa attcgatatc ggtaattccg
     4201 ccttcatcgg ctttgatatc aaagcgatta cgatgtttat tgccgagatg agcgcgcatt
     4261 ttctcgcgca tttcccgcac ttccgtttgc agagttttac cttcacgcgg cagcgtcata
     4321 atctcgcgac gcactgcgtc aaagtgcgcg gtgagctgcg gatcgccgta cactacacgc
     4381 gcacgcacca gcgcctgatg ctcccacgtc caggcctcgt ttttctgata atcagcaaat
     4441 gcttctgcgg atgtcaccag cattcccgcc gccccggacg gacgcagtcg tgcatccact
     4501 tcatacaaaa tgccggaaga ggttcgcgta ttgaacagat gcataatgcg ttgcgccaga
     4561 cgcagataaa actgtcgccc gtcgatttcc cgctcgccgt cagtcatcgc atccattggg
     4621 caatcatgga ggaagatcag gtcaagatcg gaactgtagc ctaactccca gccgcccagc
     4681 ttgccgtagc cgaccaccgc aaaaccacgg ccttcgcgat cgttgaggtg atttggctta
     4741 ccgtagcggg ccaccatttg aacccacgcc tgctgaacga cggcatctat catagcctct
     4801 gccagccagg ttaagtgatc gctcactttc atcaccggta gcgtaccagc gatatccgct
     4861 gcggcgatgc gtaacagctg cgcctgtttg aactgacgca gcgcctcaag ctgttgctct
     4921 tcgtcatctt ccggcacgcg cagcaaatac tggcgcaact catcgcggta ggcatcggtc
     4981 gccgtcggct ggtaaagagt gtttggatcg agcaattcat ccagcaataa tggataacgc
     5041 gccagctggc tggcaatcat cggcgatgcg gcacacagag aaatcaaatg tttaagcgcc
     5101 gcagggaatt cactgagcaa ttctaaatag gtggtgcggg taacaatccc caccagcaag
     5161 gcggtaatgc gcgacagcgt aacggcagcg tcttcacgcg cacagacatc acttagcaga
     5221 tgtggcatca gatggtcgag cacctgacgt cctcgcggcc cgatagtacg cttatccagc
     5281 tctttgcgga aatcagcaat cagcgttagg acctgtttgc gatcatcctc gctaagatgc
     5341 gctagcactg gcgtagtgtc atcttcctgc aacgcatcct gccacagctc acgccactgt
     5401 tccgacagcg actcttcctg agtttcactt tcgtcgtcgc caatcaattc attaaacacc
     5461 cggcgcacat tggtcatatg tgcggtcagc gccccggtca gttgcggcca gtcagcaaag
     5521 tccatcgccc acgccagccg cgcacggtta agctcatcag aaggaagcgt ttgggtttgt
     5581 tcgtcgttaa tgctttgcag caggttttcc agacgccgca ggaacagata tgccactcgc
     5641 aattgttcag catcgttttc agaaagcaga tgcagcgcgg caatgacgct gagcgttggc
     5701 agtaaagagc gcgactgcag cgacggttcg cgcccaccgc gaatgagctg gaacacctga
     5761 acgataaatt caatttcgcg aatgccgcct gcgccgagtt tgatattgtc ggtcaaacca
     5821 cgtcgacgca cttcacgggc aatcatccct ttcatgttgc gcagcgactg aatcacgctg
     5881 aaatcgatgt aacgacggaa aacaaacggg cgcagcatcg cacgcaactc gttagcatag
     5941 acgccttcgc tatcgcccat aatccgcgcc ttgaccatcg cgtaacgctc ccagtcgcgc
     6001 ccctgctcct ggtaataatc ctccaacgcg gcaaagctca gcaccagcgg gccactttcg
     6061 ccaaacggac gcagccgcat atccacgcga tagacgaagc catcctgcgt tggttgatcc
     6121 aacactttaa tcagccgctg ccccatgcgg gtaaaaaact gcgcgttatc cagttcccgg
     6181 cgtccgccct gcgtacaacc atgttccggc caggcaaaaa tcagatcgat atctgaggag
     6241 aaattcagtt ccccaccgcc cagcttaccc atgcctaaaa tcagcagcgg ttgcgcttcg
     6301 ccctgcgcat tgcacggcgt tccccactcg cggcagcaag cgtcatacag ccagtcacgc
     6361 gcggcgacaa tcagcgtctc cgccagatgg ctgagctgct gcaatatgct ctcttcagta
     6421 accaaagcca gcgtttgcgc ccaggcgatg cgcaccataa tgcgccgccg gaatagccgc
     6481 agctcgcgca ttaacccggc ttcgtcactc acattgctga gcgcctcctg caaccatgcc
     6541 gcgtaatgct gccattcatc agcctgcggc gattggcttt ccagttccgt cagccactct
     6601 ggatgcgcaa tcacgctgtc ctgcacaaaa tcactgaaag taagtactga cttcgcctgt
     6661 gtgctaagtg atttctcggc taaaggctct ggcagccgct caacaaccgt ctgccagtac
     6721 tgctgtaacg gtgaagagag cggcttcata agcgatttta tccttgcctg attaacgttt
     6781 tccgctgtgc aaccagaacg gttcctgatt gtttgcctca ttacggaaat gttcaatttc
     6841 aatgcgttgc ccggtcgcaa tagcgtgacg cagcccctgc cagttctcca gccaggcttg
     6901 cgcgacgaca ggatcatagt aacccgccag caacagtatt gagtcaatat cacgcgtcag
     6961 acgtggcaac tggtcacggt agcgatcgcc caacggctgg cagaaaacgc ttttcagttc
     7021 agcggcatgg cgggaaagat ggatatcggc aaagcgtttg aaggaatcgc tcattttact
     7081 ctgcgctttg gcatctaaaa acggctgcca ggctttgctt accagccatt cggtcaacgc
     7141 cagcttcgcc attgccgttt tggtagagta gaccgccgtc acggcagaaa ccgcagaagc
     7201 gatggtcgct tcgcattgag tcagcaaatc acgtaagtga gtgctcgctt tgcgcggcac
     7261 aataccaccg aacagcatca gtgtatgacg gaccagacca atggctgcca gcacctgttc
     7321 tttcgccgca tcgttgccgc gtacccacag ttcttcatga tactgccatt gcgctaacgc
     7381 cagctcgagc gccgcttcca gcccctgttc cacatcggct tttgccgcaa catgcaaaat
     7441 ggtggtcggt ttgatttcac gcgccggatt gccctgcgcc agatgatagc cacgcgccgc
     7501 tttgctcagg ctgccctggc gtaatccggt ttgcgatacc agttggttcg ccagtttcag
     7561 caccgcgcgc gtgtcgccgc taagcagttc cagttccagc tcacagatag gttcagcaaa
     7621 ttcccccgct ttcacctccc cctgatcgag agcgatttca attcggctgt catcgaccgc
     7681 caccagccat ttttcgcgat aaaaatcggt gctgaacagc ggttgtacgc gggaagcgag
     7741 atcggcgggc aattcgccgt tcggccagac ttccgtcggt aactgcgcca ggtcgagcgt
     7801 cggttcgctc aacgccacgt tatattccgg gcgctggtgt aagccgcctg tcactcttcc
     7861 tgcaactttc atggtcatct catagcgacc gttttcgcca cgaatacgta agcccatatc
     7921 gtgcccacgc agccagttat ccggcgtttc gtagtaaata ttcagcaact gcacggggtc
     7981 atggtgctcg ccgcccagcg tattgagatg gtcacgcaac gcctcaacgg cactgtgatt
     8041 aacaataaac tttaattcga tttcctgagc catggccttt acttatcggt tatgtcacat
     8101 aagtgacgat gaacggcgaa cttaatgcga tcttttttgt cagtagatag tattttgcgt
     8161 caaattgcca tgcaacgggc aatttgacgg gcgtaaaagt ttgaagcagt ggcaagacct
     8221 gacacagagg attccgattg atgtcgaatg ctttgcgtag cgacactgat gccactacta
     8281 tcgttccact ttccatgaca ataacgacag cctgatgcca aaattacgcc tgatcggatt
     8341 aactttactc gcacttagcg ccactgccgt ctcacacgct gaagaaacgc gctatgtttc
     8401 tgatgaactg aatacctggg tccgtagcgg tccgggagat cattatcgcc tcgtgggcac
     8461 ggttaacgcc ggcgaggaag tgaccttatt acaaactgac gccaacacca attatgccca
     8521 ggtgaaagac agctctggcc gtaccgcctg gatcccgttg aaacaactta gcactgagcc
     8581 aagcctgcgc tcccgtgtgc cagatctgga aaatcaggtc aaaaccctga ccgataaact
     8641 caccaatatc gataacacct ggaatcagcg caccgcagaa atgcagtaaa aagtggcgca
     8701 gagcgacagc gtgatcaacg gattaaaaga agaaaatcag aaattgaaaa acgagctgat
     8761 tgtcgcgcag aaaaaggtcg atgccgccag cgtacagctg gatgacaaac agcgcaccat
     8821 catcatgcaa tggtttatgt atggcggtgg cgtgctgggg cttggcttgc tgctcggtct
     8881 ggtactgcca cacctgatcc caacgcgcaa acgcaaagat cgctggatga actaaatcgc
     8941 cttcttcgtt gcactgtctt attattagga attgtgtatt tgacgaaggg atgatggcgt
     9001 gaagatttat ctggtcggtg gtgctgttcg ggatgcattg ttagggctac cggtcaaaga
     9061 cagagattgg gtggtggtcg gcagtacgcc acaggagatg ctcgacgcgg gctaccagca
     9121 ggtaggccgc gattttcctg tgtttctgca tccgcaaacg catgaagagt atgcgctggc
     9181 acgtaccgaa cggaaatccg gttccggtta caccggtttt acttgctatg ccgcaccgga
     9241 tgtcacgctg gaagatgatc ttaagcgtcg cgatctgacc attaatgcgc tggcccagga
     9301 cgataacggc gagattatcg acccgtacaa cggtctgggc gatctgcaaa atcgtctgtt
     9361 gcgccatgtt tcccccgctt ttggcgaaga tccgttacgc gttctgcgcg tggcgcgttt
     9421 tgctgcgcgt tatgcccacc tcggttttcg tattgccgat gaaactctga cgctgatgcg
     9481 cgagatgacc catgcgggtg aactggaaca cctgacgcct gaacgggtat ggaaagagac
     9541 ggaaagcgcc ctcaccaccc gcaatcccca agtgttcttc caggtactgc gcgattgcgg
     9601 tgcacttcgc gttttattcc cggaaattga cgccctgttt ggcgttccgg cccctgccag
     9661 gtggcatccg gaaatcgaca ccggtattca taccttaatg acgctctcaa tggcggcgat
     9721 gctgagtccg caggttgatg tccgtttcgc aactttatgc cacgatctcg gtaaaggact
     9781 gacgccgcca gaactttggc cgcgtcatca tgggcatggc ccggcgggtg ttaagttagt
     9841 ggaacaacta tgccagcgtc tgcgcgtgcc aaatgaaatt cgcgatttag ccagactggt
     9901 ggctgagttt cacgatctca tccacacctt cccaatgctg aacccaaaaa ccatcgtcaa
     9961 attatttgat tccatcgatg cctggcgtaa accgcagcgt gtcgagcaac tggcgctgac
    10021 cagcgaggct gacgtacgcg gcagaaccgg ttttgaatca gcggactacc cgcaaggccg
    10081 ttggttgcgc gaagcctggg aagtggcgca gtcagtgccg acaaaagcgg tcgttgaagc
    10141 gggatttaaa ggtgtggaga ttcgcgagga gctgacccga cggcggattg cggcggtagc
    10201 cagttggaag gaacaacgtt gcccaaagcc tgactgagta taaaactaaa cgttaacacg
    10261 aaccatcccc tcgccccttc ggggagaggg tgaggggaac agaccagcac cggtgcgaac
    10321 aatcaccccc accccggccc tctccctaca gagcgaggga gaaaaccagg cctgctcccg
    10381 aaccttttct caatcaaaag aacacgacgt acaccgcagc cgccacaata aagcgataaa
    10441 tggcgaacgg gataaacgaa atgcgcttaa tcaattgcag gaaggtttta atcgctatca
    10501 gtgccaccac aaaagcggtg ataaacccaa cggcaaacat cgggatatcg ccggttgtca
    10561 ggaagcccca gcttttgtag agatcgagcg ccgttgcgcc catcatcatc ggtaccgcca
    10621 gcaggaacga gaactcggaa gcagcgtaac ggctcacgcc catcagcatc ccacctgaaa
    10681 tggtggcccc ggaacgggag aaacccggcc acagcgccag acactggaaa cagccaatca
    10741 taaacgcctg acgataggtc atatcatcaa gacccggcgc acgcggctct ttcggcttca
    10801 ggcattcggc ggcaatcagc aacaaaccgc caacgaccag tgcatacatc acatttatcg
    10861 ggttaaacaa tgacttaatc gtgtcgtgga acaacagccc cagtaccacc gccggaatca
    10921 tccccagcaa aatgtggatc agcgttaaac gacctttgct ttctccttcg tgctgcaacg
    10981 ggcggccaaa gtggatgcca atcaggccaa acagacgccg ccagaacatc actactaccg
    11041 ccagaattga tcctaactgg atcacaactt caaaggtttt cgccgtgtcg ccctcgaacc
    11101 ccaacaagtg accgacaata atcatatggc ccgtgctgga taccggcaga aattctgtca
    11161 atccttcgac cacacccaat attgccgcta tcagcagcga gtgcatatcg ctcatcaata
    11221 aacccctaaa ttattaaaat gtaccgcttg tccggactac tgcagtaaga ccaggttata
    11281 accgtttggt ttaacagctg taaaattaat tattttcttt cagattattg ccacgctcaa
    11341 tgattacacc aacattcgcc gcccgcgcca ctgcgcctgg cttgctgagt ttgatgcgca
    11401 cccacggcga gttgaagcgt gctaacagca gctccgccac ctcttcagcc acgcgttcca
    11461 ccagcgcaaa acgcgccccc tcgacgtggc tgaccaccgt ttctgcaatg tcagcgtaac
    11521 tgaggcaatc cgccacatca tcacttttcg ccgctttacg gttatcccat gccatttcga
    11581 tatcgaacac taacttctgt tcgatggtct gttcccagtc gtaaacacca atagtggtga
    11641 ttaccgaaag ttgctctata aatacaatat ccatcacgtc ctgcctgctt tttggctaac
    11701 cggataccac ttccggcgaa atgtgcgtat tatccacaga ttcatcgttg aacacgaatt
    11761 ttcaaaacgg aacagcttat gagtgcaatc gcgcctggaa tgatcctcat cgcgtacctc
    11821 tgcggctcca tttccagtgc cattctggtt tgccgcttgt gtgggctgcc cgatccgcga
    11881 accagcggct ccggcaatcc aggcgcaacc aatgtgttac gtatcggtgg caagggagca
    11941 gccgtaacag tactgatttt cgacgttctg aaaggaatgt tgcccgtctg gggcgcgtat
    12001 gaattaggtg tcagcccctt ctggctaggc ttaattgcca tcgccgcctg tcttggacac
    12061 atctggcccg ttttcttcgg atttaaagga ggaaaaggcg ttgctaccgc ttttggtgcc
    12121 atcgcaccca ttggctggga tctcaccgga gtaatggcgg gaacctggtt actgaccgtg
    12181 ctattgagcg gatactcgtc gctgggagcg attgtcagtg cattgattgc tccgttttat
    12241 gtctggtggt ttaagccaca attcaccttc ccggtttcga tgctctcttg cctgatcctg
    12301 ctgcgtcatc atgacaacat ccagcgtctg tggcgtcgtc aggagacaaa aatctggacg
    12361 aaattcaaaa gaaagcgcga aaaggatccc gagtgatttc tggtggatct acatgacctg
    12421 atagccttca tcgggcttgc ccagccgttg ctggcaccat gccgccagaa attccacgca
    12481 gacacgtaat ttcatgctgc gatagagcgg ctcccggtaa acagcccaga tattggcgct
    12541 ttgtgcatac tccggcaata cttgcaccag tttgccactc tccagaaacg gcaacacatc
    12601 ccactcggaa cgcagcataa tccctttgcc ctccagcgcc cattgcaaca ctatctcgcc
    12661 gctattggag gaaagatgcc cgctaacctt caccgatttt ttctcctgac cgttccccaa
    12721 ctcccatatt ccgtgggtca tatcgcgctc tttggtcacc agacagtcat gacgacttaa
    12781 ttcctgtaat gattgtggct gcggatattt ttgcagatac tcaggtgctg cgcataatat
    12841 tcttttattt ttcgttaaca gatgcgcaat ataataatca ggaatttcgt cattaatacg
    12901 aatatccaga tcaatattat cctgcactaa atcaatttgc cgatcgaaca attcaaaatg
    12961 cacctgtaac tcaggataat tgcgcataag ttcggtaatg gctggcgcaa tatggctgcg
    13021 cccaaaacca aaactgcaac caatacgaat catcccctcc gggcgcgttt tgatttgcgt
    13081 gacgtcatcg acca
//
LOCUS       DADMHC010000114        13060 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.114, whole genome shotgun sequence.
ACCESSION   DADMHC010000114 DADMHC010000000
VERSION     DADMHC010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13060)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13060)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13060
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.114"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(156..896)
                     /locus_tag="JNZ57_002630"
     CDS             complement(156..896)
                     /locus_tag="JNZ57_002630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative stress defense protein"
                     /protein_id="HAY8828811.1"
                     /translation="MKFKVIALAALMGISGMAAQANELPDGPHIVTSGTASVDAVPDI
                     ATLAIEVNVAAKDAATAKKQADERVAQYISFLELNQIAKKDISSANLRTQPDYDYQDG
                     KSILKGYRAVRTVEVTLRQLDKLNSLLDGALKAGLNEIRSVSLGVAQPDAYKDKARKA
                     AIDNAIHQAQELANGFHRKLGPVYSVRYHVSNYQPSPMVRMMKADAAPVSAQETYEQA
                     AIQFDDQVDVVFQLEPVDQQPAKTPAAQ"
     gene            complement(989..1624)
                     /gene="argO"
                     /locus_tag="JNZ57_002631"
     CDS             complement(989..1624)
                     /gene="argO"
                     /locus_tag="JNZ57_002631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine exporter ArgO"
                     /protein_id="HAY8828812.1"
                     /translation="MFSYYFQGLALGAAMILPLGPQNAFVMNQGIRRQYHIMIALLCA
                     ISDLVLICAGIFGGSALLMQSPWLLALVTWGGVVFLLWYGFGAFKTAMSSNIELASAE
                     VLKQGRWKIIATMLAVTWLNPHVYLDTFVVLGSLGGQLDVEPKRWFALGTISASFLWF
                     FGLAILAAWLAPRLRTAKSQRIINLVVGCVMWFIALQLARDGIAHAQALFS"
     gene            complement(1763..2623)
                     /locus_tag="JNZ57_002632"
     CDS             complement(1763..2623)
                     /locus_tag="JNZ57_002632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small-conductance mechanosensitive channel MscS"
                     /protein_id="HAY8828813.1"
                     /translation="MEDLNVVDSINGAGSWLVANQALLLSYAVNIVAALAIIIVGLII
                     ARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGA
                     AGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADG
                     KIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKD
                     REMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVN
                     FKRVKEDKAA"
     gene            complement(2981..4060)
                     /gene="fbaA"
                     /locus_tag="JNZ57_002633"
     CDS             complement(2981..4060)
                     /gene="fbaA"
                     /locus_tag="JNZ57_002633"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016505616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HAY8828814.1"
                     /translation="MSKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSIN
                     AVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYG
                     VPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSK
                     YLERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFT
                     IAASFGNVHGVYKPGNVVLTPTILRDSQEYVSKKHNLPHNSLSFVFHGGSGSTAQEIK
                     DSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVW
                     LRAGQTSMIARLEKAFQELNAIDVL"
     gene            complement(4275..5438)
                     /gene="pgk"
                     /locus_tag="JNZ57_002634"
     CDS             complement(4275..5438)
                     /gene="pgk"
                     /locus_tag="JNZ57_002634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HAY8828815.1"
                     /translation="MSVIKMTDLDLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTI
                     ELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDGVDVA
                     EGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADV
                     ACAGPLLAAELDALGKALKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIA
                     NTFIAAQGHDVGKSLYEADLVDEAKRLLTTCNIPVPSDVRVSTEFSETAPATLKSVND
                     VKADEQILDIGDASAQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA
                     FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEERAKK"
     gene            complement(5488..6507)
                     /gene="epd"
                     /locus_tag="JNZ57_002635"
     CDS             complement(5488..6507)
                     /gene="epd"
                     /locus_tag="JNZ57_002635"
                     /EC_number="1.2.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="erythrose-4-phosphate dehydrogenase"
                     /protein_id="HAY8828816.1"
                     /translation="MTVRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGM
                     AHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGV
                     YGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCI
                     IPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAG
                     ITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIV
                     DYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMA
                     TVAFR"
     gene            6879..7310
                     /locus_tag="JNZ57_002636"
     CDS             6879..7310
                     /locus_tag="JNZ57_002636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HAY8828817.1"
                     /translation="MMTLPYPYSSSARFYALRLLPGQEVFSQLHAFAQQHQLHAAWIA
                     GCTGSLTDVALRYARQEGTTLLNGTFEVISLNGTLEQSGEHLHLCVSDPHGTMLGGHM
                     MPGCTVRTTLELVIGSLEELAFSRQPCALSGYDELHISPVK"
     gene            7333..7911
                     /locus_tag="JNZ57_002637"
     CDS             7333..7911
                     /locus_tag="JNZ57_002637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HAY8828818.1"
                     /translation="MARSHFSSQALVLIVISIAINMIGGQLASMVKLPIFLDSIGTLI
                     SAVLLGPVIGMLTGLLTNLLWGLLTDPIAAAFAPVAMVIGLVAGWLARAGWFRTLPKV
                     VVSGVIITLAVTVVAVPLRTALFGGVTGSGADLFVAWMHSMGQNLVESVAITVIGANL
                     VDKILTAVIVWLLLRQLPIRTTRHFPAMAAVR"
     gene            7912..8619
                     /locus_tag="JNZ57_002638"
     CDS             7912..8619
                     /locus_tag="JNZ57_002638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HAY8828819.1"
                     /translation="MHPFTSLTLWALAACTTLILPAQTILPIYSAATFFCLIALKATR
                     RRAKYVVWLMFSLGAGLWLVHGGWLPEWLSGTPRSPERWSHAITLWLRILAIVSTSQL
                     WMQYVPVQCFIRALFASRLPPGVAYLFAGPLLVVEQLKRQLAIIHEAQRARGVPLDEG
                     WYQRLRAMPALIIPLTHNALNDLAVRGAALDMRAFRIHNRRTTLWAPADSTLQRVARY
                     TMILLMLTEFGAWIWLR"
     gene            8607..9284
                     /locus_tag="JNZ57_002639"
     CDS             8607..9284
                     /locus_tag="JNZ57_002639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     ATP-binding protein"
                     /protein_id="HAY8828820.1"
                     /translation="MVTLEQFRYCPTHSTHPPFCYDFHYVKPGMVAIFGDNGSGKSTL
                     AQLMAGWYPDFLPGEITGTGTLLGTPIGHLPLNEQSATIQLVQQSPYLQLSGCTFSVE
                     EEVAFGPENLCLAEAEIMARIDAALTLTECQPLRHRHPATLSGGETQRVVIACAIAMQ
                     PKLLILDEAFSRLTPQASEMLLQRLQHWAFERGSLIILFERHRTPFLNYCQQAWQLQN
                     GALQPLC"
     gene            9278..9955
                     /locus_tag="JNZ57_002640"
     CDS             9278..9955
                     /locus_tag="JNZ57_002640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708691.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HAY8828821.1"
                     /translation="MLTLNQISYRWPGAATDCLCDISLQLKQGEWLALTGDNGAGKST
                     LLRVMAGLLTPTAGTVMLQQQAMKNLKNRQRAAKVGVLFQEAENQLFHSTVADEIAFG
                     LKLQKCPADEITQRTHAALQCCQLADTANSHPLDLHSAQRRMVAIACLEALSPPLLLL
                     DEPSRDFDENWLSVFESWLEKCRQRGTSVVAISHDAAFTRRHFSRVVRLEDGVIRNVN
                     PPDDIHP"
     gene            complement(9927..10640)
                     /locus_tag="JNZ57_002641"
     CDS             complement(9927..10640)
                     /locus_tag="JNZ57_002641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside/nucleotide kinase family protein"
                     /protein_id="HAY8828822.1"
                     /translation="MKIELTVNGLKIQAQYQNEEIENVHKPLLRMLAALQTVNPQRRT
                     VVFLCAPPGTGKSTLTTFWEYLAQQAPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGA
                     PETFDVAKLAENLRQVVEGDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEK
                     WCQLAQFCDFSIFINAPATALRERLVGRKLAGGVSLADAEAFYDRTDGPNVRRVLEES
                     LPANLTLMMTATGEYRLVD"
     gene            complement(10637..11146)
                     /gene="fumE"
                     /locus_tag="JNZ57_002642"
     CDS             complement(10637..11146)
                     /gene="fumE"
                     /locus_tag="JNZ57_002642"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarase E"
                     /protein_id="HAY8828823.1"
                     /translation="MAKLTEDDVLEQLDAQDNLFSFMKTAHSILLQGIRQFLPSLFVD
                     NDEEIVEYAVKPLLAQSGPLDDIDVALRLIYALGKMDKWLYADITHFSQFWHYLNEQD
                     ETPGFADDMTWDFISNVNSITRNAMLYDALKAMKFADFAVWSEARFSGMVKTALTLAV
                     TTILKELTP"
     gene            complement(11168..12133)
                     /gene="yggF"
                     /locus_tag="JNZ57_002643"
     CDS             complement(11168..12133)
                     /gene="yggF"
                     /locus_tag="JNZ57_002643"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HAY8828824.1"
                     /translation="MMSLAWPLFRVTEQAALAAWPQTGCGDKNKIDGLAVTAMRQALN
                     DVAFRGRVVIGEGEIDHAPMLWIGEEVGKGDGPEVDIAVDPIEGTRMVAMGQSNALAV
                     MAFAPRDSLLHAPDMYMKKLVVNRLAAGVIDLSLPLADNLRNVARALGKPLDKLRMVT
                     LDKPRLSAAIEEATQLGVKVFALPDGDVAASVLTCWQDNPYDVMYTIGGAPEGVISAC
                     AVKALGGDMQAELIDFCQAKGDYTENRQIAEQESKRCKAMGVDVNRVYSLDELVRGND
                     ILFSATGVTGGELVNGIQQTANGVRTQTLLIGGADQTCNIIDSLH"
     gene            complement(12130..>13060)
                     /locus_tag="JNZ57_002644"
     CDS             complement(12130..>13060)
                     /locus_tag="JNZ57_002644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HAY8828825.1"
                     /translation="TYMIIPEIAINLGCVLPYHGSYFAAASLVEPMCCIIGAYHANYH
                     TTQYVYEHRMGVKPGGNIALLACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQV
                     QKLLPVDLAASKGIELVYVNTKGMSDPVQTLRALTGDVGFDDIFVYAAVPAVVEMADE
                     LLAEDGCLNFFAGPTDKNFKVPFNFYNVHYNSTHVVGTSGGSTDDMKEAIALSATGQL
                     QPSFMVTHIGGLDAVPDTVLNLPDIPGGKKLIYNGVTMPLTAIADFAEKGKTDPLFKE
                     LARLVEETHGIWNEQAEKYLLAQFGIDIGEAAQ"
BASE COUNT         3101 a         3570 c         3221 g         3168 t
ORIGIN      
        1 gcatccttgt ccgcttaacc gtttcagtca gcctatcctt gatgaaaccg cgagcaaaga
       61 taggtgatta cgtcatggtt ttacagaaaa ttacagaaaa aggaggcaat atcgggtaaa
      121 ggcattagcc cgacgaatac gtcgggctac aagtattatt gtgctgcagg tgttttagcg
      181 ggttgttgat ccacaggttc taactggaag accacatcga cctgatcatc aaactgaata
      241 gcggcctgct cgtaagtttc ctgggcagac accggcgcgg catcggcttt catcatccgc
      301 accattgggc tgggctgata gttggaaaca tggtagcgca cgctatatac cggccccagt
      361 ttacgatgaa agccgttcgc cagttcctgc gcctgatgaa tcgcgttatc aatcgctgcc
      421 ttacgcgctt tgtctttata ggcatccggc tgcgccacgc ccagcgacac tgaacgaatt
      481 tcgttaagac ccgccttcag cgcgccatcc agcaaggaat tcagtttgtc taactgacgg
      541 agcgtgactt ccaccgttct cacagcgcgg tagcctttca ggatactttt accatcctga
      601 taatcataat ctggctgggt gcgtaaattc gctgagctga tatctttttt cgcgatctga
      661 ttgagttcaa ggaaggaaat gtattgtgcg acgcgctcat ctgcctgttt cttggctgta
      721 gcggcatcct tcgcggccac gttaacttca atcgcaagag tggcaatgtc tggcaccgca
      781 tccacacttg ccgtaccgga ggtgacaata tgcggtccat ccggcaattc gttagcctgc
      841 gctgccatcc cgctaatacc cattaatgcc gctagggcga taactttgaa cttcacgtta
      901 gtctctccgt gttaattgac ttgcccaaaa ttcaggacct ctggaggcaa gcttagcgcc
      961 tctgttttat ttttccatca gatagcgcct aactgaacaa ggcttgtgca tgagcaatac
     1021 cgtctctcgc cagctgcaag gctataaacc acatgacaca tcccactacc agattgataa
     1081 tgcgctgtga ttttgccgtg cgcaggcgcg gtgccagcca ggctgcgaga atagccagac
     1141 caaagaacca caggaaagag gcgctaattg tcccgagcgc aaaccaacgt tttggttcga
     1201 cgtcaagctg cccgccaagg ctgcccagta caacaaaagt atccaggtaa acatgcggat
     1261 tcagccaggt cactgccaac atggtggcga taattttcca tctgccttgc ttcaggactt
     1321 cggcactagc taactcaata ttactactca tcgctgtttt aaaagcgcca aaaccatacc
     1381 agagcaagaa gactacgccg ccccaggtga ccagcgccag caaccacggc gactgcatca
     1441 ataacgcgct accaccaaaa atccccgcgc aaatcaggac caaatcgctg atagcgcaaa
     1501 gtaaggcaat cataatgtgg tactgacgac gaatgccctg attcatcaca aaagcatttt
     1561 gtgggccgag cggcagaatc atagctgccc caagagcaag accttgaaag taataagaaa
     1621 acacgttgga tattccgaat taagtatctg atgcagagac tatatcgcga gattgttatt
     1681 agcggaaatt gataatatta attggcaatc agaataacta ataagagaga ggccagagag
     1741 tattatctgg cctcagcgtt gattacgcag ctttgtcttc tttcacccgc ttaaagttca
     1801 catccatttg cgggtacggg aagctgatac cggcggcatc aaattcacgt ttaatacgct
     1861 ccagcacatc ccagtacacg ttttgcagat cgccgctgtt gctccagacg cggaccacga
     1921 aattaatcga cgatgcacca agttcgttca ggcgcacagt catttcgcga tctttcaaaa
     1981 tgcgatcttc agactggata atattggtca ggatctgctt aacctgatcg atatcggaat
     2041 catacgccac gccaataata aattcgttac ggcgaactgg ctcgcgggag aagttaataa
     2101 tatttccggc aataatttta ccgttcggaa taacgataat tttaccgtct gcagtacgca
     2161 tggtggtgga gaaaatctgc acactcagca cagtaccggc tacgccgccg aggtcaacat
     2221 attctccggc acggaacggt cggaacatga caagtaacac gccagcggcc aggttagaaa
     2281 gtgacccctg caaagccaga ccaacagcta agcctgcggc accgagtaca gcaatgactg
     2341 acgctgtttg tacacccacg cgtcccaggg cagcgattag cgtaaaggcg ataataccgt
     2401 aacggactaa tgcagaaaga aaatcagcaa cagtggcatc gattttacgg gagatcatca
     2461 ggcgattcac cgcgttggaa atcatccgcg cgataatcaa accaacgatg atgatcgcga
     2521 gtgccgccac gatgtttact gcataactta gcagcagcgc ctggttagct accagccagc
     2581 ttcccgcgcc gtttatgcta tcgacaacat tcaaatcttc cattcaatat tccttttcaa
     2641 ctgactcaaa atggagaaat acactccgcc gccttatgac gggcagtctg acaagggtaa
     2701 acaataaagc ataattttgc caaatagatc acagatttct catctgaatc accttgcttt
     2761 tggcgaaaaa atccccgcag agcggggctc agacagatat caatgtgcgc tttgtcatgc
     2821 cggatgcggc gtgaacgcct tatccggcct acaaaaacct gtaaattcaa tatattgcag
     2881 gatacgtgta ggcctgataa gcgtagcgca tcaggcaatt ttgcttttgg cgaaaaaaag
     2941 acccgcagag cgggccttga gataagcaga aaggaatatc ttacagaacg tcgatcgcgt
     3001 tcagttcctg gaatgctttt tccagacgag cgatcatcga agtctgaccg gcacgcagcc
     3061 atacgcgcgg atcgtagtat ttcttgttcg gctgatcttc gcctttcggg ttacccagct
     3121 gaccctgcag ataagcttcg ttcgctttgt agtagttcag aacgccttcc caggttgccc
     3181 attgggtatc ggtatcgatg ttcattttca ctacgccgta gcttacggag tctttgattt
     3241 cctgagcagt agaaccggaa ccaccgtgga atacgaagct caggctgttg tgcggcaggt
     3301 tgtgtttctt agaaacatat tcctgagaat cacgcaggat ggtcggagtc agaaccacgt
     3361 tacccggctt gtaaacaccg tgtacgttac cgaaggacgc agcgatggtg aaacgcgggc
     3421 tgattttgct cagctcggtg tatgcgtaat caacgtcttc cggctgggtg tacagtgcag
     3481 aagcgtccat gtggctgttg tccacgccgt cttcttcacc accggtgcaa cccagttcga
     3541 tttccagagt catgccgatt ttggacatac gctccaggta tttagagcag atttcgatgt
     3601 tctcttgcag agattcttca gacaggtcga tcatgtgaga agagaacagc ggcttaccgg
     3661 tagctgcgaa gtgtttttca cccgcgtcca gcagaccgtc gatccacggc agcagtttct
     3721 tcgcgcagtg gtcagtgtgc aggataaccg gaacaccata atgttcagcc atctggtgaa
     3781 cgtgatgcgc accagagatc gcgcccagga tagcagcacc ctgcggaacg tcagatttca
     3841 cgcctttacc agcgataaag gaagcaccac cgttggagaa ctgaacgata accggcgctt
     3901 taactttagc agcagtttcc agtacggcgt tgatggagtc agtaccgacg cagtttactg
     3961 ctggcagtgc gaagttgttt tcttttgcta cctggaaaac tttctgtacg tcatcaccag
     4021 tgattacgcc aggttttacg aaatcaaaaa tcttagacat gtctcttgtc ctgtatcgtc
     4081 gggccttata ctcatcatac ttcaagttgc atgtgctgcg tctgcgttcg ctcaccccag
     4141 tcacttactt atgtaagctc ctggggattc actctcttgt cgccttcctg caactcgaat
     4201 tatttagagt atgaaaaaat gcgtgctcta aaagcgcgct gaaacaaggg caggtttccc
     4261 tgccctgtga ttttttactt cttagcgcgc tcttcgagca tcgctactgc aggcagtact
     4321 ttaccttcca cgaattcgag gaatgcgccg ccgccagtgg agatgtagga gattttgtca
     4381 gcaatgccga acaggtcgat tgctgccaga gtgtcgccgc cgccagcgat ggagaacgct
     4441 tcgctgtctg cgatagcgtt agccacgatt tcagtacctt tgcggaagtt cgggaattcg
     4501 aacacgccaa ccggaccgtt ccacagaatg gttttcgcat tcttcaggat ttcagccagt
     4561 tcctgagcgg aagcatcacc gatatccagg atctgctcgt cagctttcac atcgttaaca
     4621 gatttcaggg tagccggtgc agtttcagag aactcggttg atacgcgaac atcagacgga
     4681 accgggatgt tgcaggtggt cagcagacgt ttagcttcgt caaccaggtc agcttcgtac
     4741 agggatttac ccacatcgtg gccttgtgcc gcgataaagg tgttagcgat accaccacca
     4801 acaatcagct ggtcagcgat tttagacagg gagtccaaaa cggtcagttt ggtagatact
     4861 ttagaaccac caacgatagc caccatcggg cgagcaggtt ctttcagtgc tttacccagc
     4921 gcgtccagtt cagctgccag cagcgggcct gcgcacgcaa cgtcagcgaa tttaccgata
     4981 ccgtgagtag aagcctgcgc gcggtgagca gtaccgaatg cgtccattac gaacacgtca
     5041 cacagtgcag cgtatttttt ggacagggtt tcgtcgtctt tcttctcgcc tttgttgaag
     5101 cgaacgtttt ccagaacaac cagttcacct tcagcaacgt caacgccgtc gaggtaatct
     5161 ttaaccagac gaaccgggtt agacagtttg tctttcaggt agttaacaac cggcagcaga
     5221 gagaattctt cgttgtactc gccttcggta ggacgaccca ggtgggaagt taccatcact
     5281 tttgcgcctt gtttcagggc cagttcgatg gtcggcagag aagcacggat acgcgcgtcg
     5341 ctggttactt tcccgtcttt tactggtacg ttcagatccg cacggataaa tacacgtttc
     5401 ccagcaagat ccagatcggt catcttaatt acagacatgg tgaatcctct cgttgattct
     5461 aaaagttttg cagacgctgc ttgcgtctta cctgaaagca acagtagcca tagctaacgt
     5521 cgtgtcgagc attcggttag caaagcccca ttcgttatcg caccagacca acgttttgat
     5581 caggtgtgcg ccactgaccc gggtttgggt gccatcgaca atggcactgt gcggatcgtg
     5641 gttaaaatct acagagacca acggcaattc cgtatagtca actataccat gaaatgcacc
     5701 ttgtgctgct ttttgcagca acaggttgac ttcattggct tttacaggtt tcttcaccgt
     5761 cacgcttaaa tcgattgccg tcacatttat ggttggcaca cgtaccgcaa tcgcttcaaa
     5821 gcgatcgtta aattgcggaa aaaatcgtgt gataccggcg gccagtttag tatcgaccgg
     5881 aatgatcgac tggctggctg cccgggtgcg acgcaggtca ggatggtatg catcaataac
     5941 ctgttgatcg tgcatggcgg agtgaattgt ggtcacagtg ccggactcaa taccgtacgc
     6001 atcatctaac aatttgatga cgggaattat gcaattcgtg gtacaggaag cgttagaaac
     6061 gatgcggtgt tccgcacgaa gttgatcctg attgacgccg taaacaacgg tcgcgtcgag
     6121 atcgttactg ccaggatgtg aaaagagcac ttttttggcc ccggcggcaa tatgcgcttc
     6181 gccatgctcg cgggagccat atacgccggt gcagtcgagg actacatcaa cgccaagttc
     6241 acgccagggg agcgattgca gtgaacgttc atgcaatacg cggatggcgt catcaccaac
     6301 aaaaagttga tcgcgttcct gtcgtacttc ccatgcaaaa cggccatggc tggtgtcata
     6361 tttcaacaaa tgcgccatgc ccgcagcatc cgccagttcg ttgattgcca ccacggtaat
     6421 ttccgcccgg cgtccggatt catacaaagc acgaaccaca ttacgcccga tgcgaccgaa
     6481 gccatttatc gctacgcgta cggtcataga tctcctgcaa ggttttccct gagcaaattt
     6541 gccagacaga gtaatccagc aaatcgtccg gggaaacctt acctgtcgca aactgcgact
     6601 gattggttaa ttgtcgaaca tttaatcgac tgaaacgctt cagctaggat aagcgaaacg
     6661 tggaataaaa ggaatgattg tccagtcaaa gaaagcaatt atctgactta cgtcacgttt
     6721 tcagccccgc ccctgtggaa tttattccac tttgcagaat cacgaataag cgtagcaaaa
     6781 tcttttcgtt gtgccgtcac aaaccctgac ttatatcaga atatgactga tgcagcgtcg
     6841 atattatccg caatacgtcc gagtttcgga gtactccaat gatgacattg ccctacccat
     6901 attcttcctc cgcacgcttt tacgcactgc gcctcctccc cgggcaggaa gttttttccc
     6961 agctacacgc ttttgcacag cagcatcaac ttcatgccgc ctggattgca ggctgtaccg
     7021 gtagcctgac tgacgtcgcc ttgcgctatg ccaggcaaga aggcaccacg ctcctgaacg
     7081 gtacattcga agtgatctca ctaaacggca cgctggaaca gagtggtgag catcttcatc
     7141 tctgcgtttc cgatccacac ggcacgatgc ttggcggtca tatgatgccc ggctgtaccg
     7201 tgcggaccac gcttgaactg gtgatcggta gccttgagga actggcgttt agccgccaac
     7261 cttgcgcgct ttctggttac gacgagttgc atatttcccc cgttaaataa ctactttcaa
     7321 agaggttttc ttatggcgcg tagccacttt tccagtcagg cactggtgtt gatcgttata
     7381 tctatcgcca tcaatatgat cggcgggcaa ctggccagca tggtcaaatt acctatattt
     7441 ctcgactcca tcggcacact tattagcgcg gtactgcttg gtccggtgat cggaatgctg
     7501 accggcttac tgaccaattt actctgggga ttgctgaccg acccgatcgc cgccgcattt
     7561 gcacccgtcg cgatggtcat cggcctggtc gccggttggc tggcgcgagc gggttggttt
     7621 cgcaccctgc caaaagtcgt tgtcagcggc gtgattatta cgcttgcggt aacggtcgtc
     7681 gctgtaccgc tgcgtactgc gctgttcggc ggtgtcaccg gtagcggagc cgatttgttc
     7741 gttgcctgga tgcactcgat ggggcaaaac ctggtggagt cggtggcgat tacggtgata
     7801 ggcgcgaacc tggtcgataa aattcttaca gcggtgattg tctggctttt actgcgccag
     7861 ctgccgattc gcaccacgcg ccattttccg gcaatggctg ccgtgcgcta aatgcatcca
     7921 tttacctcat taacactgtg ggcattggcg gcctgcacca cgcttatcct gcccgcgcag
     7981 accattttgc cgatctatag cgcggcgacc tttttctgcc ttattgcgct aaaggccacg
     8041 cggcggcggg caaaatatgt cgtctggctg atgttctcgc tgggagccgg gctgtggctg
     8101 gtacacggtg gctggctacc agaatggcta agcggcacgc cacgctcgcc agaacggtgg
     8161 tcgcatgcta ttacgctctg gttgcggatt ctggcgattg tttcaacctc acagttgtgg
     8221 atgcagtacg tccccgtgca atgttttatt cgcgctctgt ttgcttctcg cctgccgcca
     8281 ggcgtcgctt atctgtttgc cgggccgtta ttggtcgttg agcagttaaa acggcaatta
     8341 gcgattattc atgaagcgca gcgtgcccgc ggcgtgccgc tggatgaggg ctggtatcag
     8401 cgtttacgtg cgatgcccgc gttaattatt ccgctaacac acaatgcgct taacgatctg
     8461 gctgtccgtg gtgcggcgct ggatatgcgg gcatttcgga tccacaaccg acgaacaacg
     8521 ttgtgggcac cagccgatag caccctacaa cgcgtagcgc gttacaccat gatcttgctg
     8581 atgctgacag aattcggagc gtggatatgg ttacgttaga acagttccgt tattgcccga
     8641 cacactcaac gcatcctccg ttctgttatg actttcacta tgtcaaaccg gggatggtcg
     8701 ccatctttgg tgacaacggc agtggcaaaa gtacgctggc acagctgatg gcgggctggt
     8761 atccggactt tctgccagga gagataacag gcacggggac gctcctcggt acgcccattg
     8821 ggcatctccc gcttaatgaa caatccgcca ccatccagct cgtccagcaa tcgccctatt
     8881 tgcagctctc cggctgtacc tttagcgtgg aagaagaagt tgcctttggg ccagaaaatc
     8941 tgtgtcttgc tgaagcagag attatggcgc ggattgatgc cgccctgact ctgaccgagt
     9001 gccagccgtt gcgccatcgt cacccggcaa cactctccgg tggagagaca cagcgcgtgg
     9061 tcatcgcctg cgccatcgcg atgcagccaa agctcttaat tcttgatgaa gcctttagcc
     9121 gcctgacgcc gcaggccagc gaaatgctgt tgcagcgctt acaacactgg gcgtttgaac
     9181 gtggttcgct gattattctt tttgaacgtc atcgcacacc tttcctgaac tactgccagc
     9241 aagcgtggca attgcaaaac ggagcgctcc agccactatg ttaacgttaa atcagatatc
     9301 ttatcgctgg cctggcgcgg caacggattg tctttgcgac atttctctgc aactcaaaca
     9361 aggtgaatgg ttggcgctga ccggtgacaa tggcgcaggg aaatcgacgc tgttacgagt
     9421 aatggcaggt cttcttacgc ccacagccgg tacggttatg ctgcaacaac aggcgatgaa
     9481 aaacctgaaa aaccgccagc gcgcggcaaa ggttggcgta ctgtttcagg aagcggaaaa
     9541 ccaacttttt cacagcaccg tcgctgacga gatcgcattt ggtttgaaac tgcaaaaatg
     9601 cccggcggat gaaatcactc aacgtaccca tgctgccctg caatgttgtc agttagcaga
     9661 cactgccaac tcgcacccgt tggatctgca tagtgcgcag cgacggatgg tcgccatcgc
     9721 ctgcctggaa gcactctctc cgccactatt actgctggac gagccgagtc gggattttga
     9781 cgaaaattgg ttgagcgtgt ttgaaagctg gctggagaag tgccgccagc gaggcacgag
     9841 cgtggtagca atcagtcatg acgccgcatt tacccggcgt catttctctc gtgtggtgcg
     9901 actggaagat ggtgtaatca ggaacgttaa tccaccagac gatattcacc cgtagcggtc
     9961 atcattaagg tcaaatttgc aggcagactc tcttccagca cccggcgaac attcggcccg
    10021 tcggtacggt cataaaaggc ttctgcatct gccagcgata cccctcccgc cagcttgcgc
    10081 cccaccagac gctcccgcaa cgcagtagct ggcgcgttga taaagatcga gaaatcacaa
    10141 aattgcgcaa gctggcacca cttctcgtcg tccagcaaca accagtttcc ttcgacgatg
    10201 acgagtggtg cggtaacgtg caacgcatct tcaacaggat catgcttttg tcgatcgtac
    10261 tgcggccacg tacaatcccc ttccaccacc tggcgcagat tttccgccag tttcgcaacg
    10321 tcaaatgtct ctggtgcgcc tttgaagggg cgcaattgat gcgcgtccag ccagctattg
    10381 taatggtgaa aaccatccat cgggagcgtc tgaatagcgg gcagctccgg ggcttgttgc
    10441 gcgagatatt cccagaaggt ggttagggta gatttacccg tccccggcgg agcgcaaaga
    10501 aaaaccaccg tacgccgctg cggatttacc gtctgtaagg ccgccagcat acgcagcaac
    10561 ggtttatgta cattttcaat ctcttcgttc tggtactgtg cctgtatctt cagcccattc
    10621 accgttaatt caattttcac ggcgttaatt cctttaagat tgtcgttact gccagcgtca
    10681 gcgccgtttt gaccatcccg ctaaaacgcg cctctgacca gacggcgaaa tcggcgaact
    10741 tcatcgcttt caacgcgtca tagagcatcg cattgcgggt tatgctattg acgttgctga
    10801 taaaatccca ggtcatgtca tcggcaaatc cgggcgtttc atcctgttcg ttcaggtaat
    10861 gccagaactg ggaaaaatgc gtgatatcgg cgtacagcca tttatccatt ttccccagcg
    10921 cataaatcaa acgcagcgca acatcaatat cgtcaagcgg gccgctttgg gcgagtaacg
    10981 gcttcactgc atattccacg atctcttcat cgttatcgac aaacagcgac ggcagaaact
    11041 ggcgtatccc ctggagcaaa atagaatgcg cagttttcat aaatgaaaat aaattgtcct
    11101 gtgcatccag ttgctcaagc acatcatctt ctgtcagctt cgctattggt cttccgatag
    11161 atcaccatca atgcagggag tctattatat tacacgtttg gtccgcgccg ccgatcagta
    11221 atgtctgcgt ccgcacccca ttcgccgtct gttggatacc gttcaccaac tcgccgcccg
    11281 tcacgcccgt agcgctaaag aggatatcgt tccccctcac cagttcatcg agcgagtaca
    11341 cacggttaac gtcaacgccc attgccttgc aacgcttgct ctcctgctct gcaatctgcc
    11401 gattttccgt gtaatcccct ttagcctgac aaaagtcaat cagctcggcc tgcatatccc
    11461 cgcctaatgc tttaacggca caggcagaaa tcacgccttc tggcgcaccg ccgatggtgt
    11521 acatcacatc gtaaggatta tcctgccagc aggtcagcac gctggcggcg acatcgccat
    11581 ccggcagggc aaaaaccttc acgcccagct gtgttgcttc ctcaatcgcg gcactcaggc
    11641 gcggtttatc cagcgtaacc atgcgcagct tgtccagcgg tttacctaac gcccgcgcca
    11701 cgttacgcaa gttgtccgcc agaggcaaag acagatcaat caccccggca gccagtcgat
    11761 taacaaccag ctttttcata tacatatcgg gcgcatgtaa caggctatcc cgaggggcga
    11821 aagccatgac cgccagcgca ttgctctgcc ccatcgccac catccgcgtg ccttcaatag
    11881 gatcaaccgc gatatcgact tctggcccat cgcctttgcc cacctcttcg ccaatccaca
    11941 gcatcggcgc atggtcaatt tctccttcgc cgataaccac tcgtccacga aaagcgacgt
    12001 cgtttaatgc ctggcgcatc gcggtgaccg ccaggccatc aattttattt ttgtcgccac
    12061 atccggtttg cggccaggca gccaacgctg cctgttccgt aacgcgaaat aatggccacg
    12121 ccagggacat cattgcgcgg cctccccgat atcaatgcca aattgtgcca gcagatattt
    12181 ctcggcctgt tcattccaga tgccgtgcgt ttcctcaacc agccgcgcca actctttaaa
    12241 tagcggatcg gttttgcctt tttcggcaaa atcggcaatg gcagtgagcg gcatggtcac
    12301 gccgttataa atgagttttt taccgccagg gatatccggc agattgagca cggtatctgg
    12361 caccgcatcc agcccaccga tatgcgtgac cataaaggac ggctgcaact gccccgtggc
    12421 gcttaacgca atcgcctctt tcatgtcgtc cgttgaaccg ccggatgtac cgactacgtg
    12481 cgtgctgttg taatggacgt tgtagaaatt aaacggcact ttgaagtttt tatccgtcgg
    12541 cccggcaaag aagttcagac agccatcttc cgccagtaat tcgtcagcca tctcaacgac
    12601 agctggcacc gccgcataaa caaaaatgtc atcgaacccg acatctcctg tcagcgcccg
    12661 cagcgtctgg accggatcgc tcatcccttt ggtattcaca tacaccagct caatgccttt
    12721 actggccgcc agatccaccg gcagcagctt ctgcacctgc gccaggcgtt tgtcgtcgat
    12781 atcgaccacc accacccgtg acggttgtat gccaccgtta atggcgtaat cgatagcgcc
    12841 aatgcccatc ggacccgcac acgccagcag tgcaatattg ccgccaggtt tgacgcccat
    12901 gcgatgctca taaacatatt gcgtggtgtg ataattggca tgataagcac caataatgca
    12961 gcacataggc tctaccagcg acgccgcagc aaaataagag ccgtgatacg gtaatacgca
    13021 gcccaaatta atggcgattt cgggaataat catataggtg
//
LOCUS       DADMHC010000115        12909 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.115, whole genome shotgun sequence.
ACCESSION   DADMHC010000115 DADMHC010000000
VERSION     DADMHC010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12909)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12909)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12909
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.115"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..910)
                     /locus_tag="JNZ57_002645"
     CDS             complement(<1..910)
                     /locus_tag="JNZ57_002645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017441594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HAY8828826.1"
                     /translation="MTNFTTSTPHDALFKSFLTHPDTARDFMEIHIPKDLRELCDLDS
                     LKLESASFVDEKLRVLHSDILWSVKTREGDGYIYVVIEHQSREDIHMAFRLMRYSMAV
                     MQRHIEHDKRRPLPLVIPMLFYHGSRSPYPWSLCWLDEFAAPTTARKLYSAAFPLVDV
                     TVVPDDEIVQHRRVALLELIQKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYIL
                     LTGDEARFKAFISELTRRMPHHRERIMTIAERIHNDGWLLGRERGRKEGKVEGERSLL
                     RLLLQNGADPEWIQRYTGLSAEQMQAL"
     gene            1377..2609
                     /gene="mdtM"
                     /locus_tag="JNZ57_002646"
     CDS             1377..2609
                     /gene="mdtM"
                     /locus_tag="JNZ57_002646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtM"
                     /protein_id="HAY8828827.1"
                     /translation="MPRFFARHAATLFFPMALILYDFAAYLSTDLIQPGIINVVRDFN
                     ADVSLAPAAVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATMFTTSMT
                     QFLIARAIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLIAPIIGPLSGAAL
                     MHFVHWKVLFAIIAVMGFISFVGLLLAMPETVKRGAVPFSAKSVFRDFRNVFCNRLFL
                     FGAATISLSYIPMMSWVAVSPVILIDAGSLTTSQFAWTQVPVFGAVIVANAIVARFVK
                     DPTEPRFIWRAVPIQLVGLALLIIGNLLSPHVWLWSVLGTSLYAFGIGLIFPTLFRFT
                     LFSNNLPKGTVSASLNMVILMVMSVSVEIGRWLWFNGGRLPFHLLAVVAGVIVVFTLA
                     GLLNRVRQHQAAELAEER"
     gene            2650..3930
                     /locus_tag="JNZ57_002647"
                     /pseudo
     CDS             2650..3930
                     /locus_tag="JNZ57_002647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418756.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
     gene            4046..5198
                     /locus_tag="JNZ57_002648"
                     /pseudo
     CDS             4046..5198
                     /locus_tag="JNZ57_002648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418755.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacyl-CoA dehydratase subunit D"
     gene            5208..5975
                     /locus_tag="JNZ57_002649"
     CDS             5208..5975
                     /locus_tag="JNZ57_002649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828828.1"
                     /translation="MTYSIGIDSGSTATKGILLADGVITRRFLVPTPFRPATAITEAW
                     ETLREGLETTPFLTLTGYGRQLVDFADKQVTEISCHGLGARFLAPATRAVIDIGGQDS
                     KVIQLDDDGNLCDFLMNDKCAAGTGRFLEVISRTLGTSVEQLDSITENVTPHAITSMC
                     TVFAESEVISLRSAGVAPEAILAGVINAMARRSANFIARLSCEAPILFTGGVSHCQTF
                     ARMLESHLGMPVNTHPDAQFAGAIGAAVIGQRVRTRR"
     gene            5972..6229
                     /locus_tag="JNZ57_002650"
     CDS             5972..6229
                     /locus_tag="JNZ57_002650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3343 domain-containing protein"
                     /protein_id="HAY8828829.1"
                     /translation="MKEFLFLFHSTVGVIQTRKALQAAGMTFRVSDIPRDLRGGCGLC
                     IWLTCPPGEEIQWVIPGLTESIYCQQDGVWRCIAHYRVSPR"
     gene            6183..7154
                     /locus_tag="JNZ57_002651"
     CDS             6183..7154
                     /locus_tag="JNZ57_002651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000225344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjiK family protein"
                     /protein_id="HAY8828830.1"
                     /translation="MVSGAALHITGFLRVKDSLRSLRILLDILLICLKGITVTKSISL
                     SKRISVIVILFAIVAVCTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNISSLTW
                     SAQSNTLFSTINKPAAIVEMTTNGDFIRTILLDFVKDLETIEYIGDNQFVISDERDYA
                     IYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN
                     GLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIG
                     EISLTKGSRGLSHNIKQAEGIAMDASGNIYIVSEPNRFYRFTPKSSH"
     gene            7222..8400
                     /locus_tag="JNZ57_002652"
     CDS             7222..8400
                     /locus_tag="JNZ57_002652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8828831.1"
                     /translation="MPSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVIMAE
                     GAFSFSQLSWIASGNYAGYLAGSLLFSFGAFHQPSRLRPFLLVSALASGLLILAMAWL
                     PPFILVLLIRFLAGVASAGMLIFGSTLIMQHTRHPFVLAALFSGVGIGIALGNEYVLA
                     GLHFAFSSQTLWQGAGALSGMMLIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAIL
                     YGLAGFGYIIVATYLPLMAKDAGSPLLTAHLWTLVGLSIVPGCFGWLWAAKRWGALPC
                     LTANLLVQAISVLLTLASDSPLLLIISSIGFGGTFMGTTSLVMTIARQLSVPGNLNLL
                     GFVTLIYGIGQILGPALTSMLGNGTSALAGATLCGAAALFIAALISTVQLFKLQVVTS
                     "
     gene            complement(8413..9069)
                     /gene="kptA"
                     /locus_tag="JNZ57_002653"
     CDS             complement(8413..9069)
                     /gene="kptA"
                     /locus_tag="JNZ57_002653"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709901.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2'-phosphotransferase"
                     /protein_id="HAY8828832.1"
                     /translation="MWKRFCAGLSCRKFINPVTMTLVNKNRKSRDENEMAKHNEKELA
                     DTSKFLSFVLRHKPEAIGIVLDREGWADIDKLILCAQKAGKRLTRALLDTVVATSDKK
                     RFSYSSDGRCIRAVQGHSTSQVAISFAEKTPPQFLYHGTASRFLDEIKKQGLIAGDRH
                     YVHLSADEATARKVGARHGSPVVLTVKAQEMAKRGIPFWQAENGVWLTSTVAVEFLEW
                     "
     gene            9217..9900
                     /locus_tag="JNZ57_002654"
     CDS             9217..9900
                     /locus_tag="JNZ57_002654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418750.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828833.1"
                     /translation="MTQQGDAVAGELATEKVGIKGYLAFFLTIIFFSGVFSGTDSWWR
                     VFDFSVLNGSFGQLPGANGATTSFRGAGGAGAKDGFLFALELAPSVILSLGIISITDG
                     LGGLRAAQQLMTPVLKPLLGIPGICSLALIANLQNTDAAAGMTKELAQEGEITERDKV
                     IFAAYQTSGSAIITNYFSSGVAVFAFLGTSVIVPLAVILVFKFVGANILRVWLNFEER
                     RNPTQGAQA"
     gene            9897..10294
                     /locus_tag="JNZ57_002655"
                     /pseudo
     CDS             9897..10294
                     /locus_tag="JNZ57_002655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313314.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            10307..11479
                     /gene="iadA"
                     /locus_tag="JNZ57_002656"
     CDS             10307..11479
                     /gene="iadA"
                     /locus_tag="JNZ57_002656"
                     /EC_number="3.4.19.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-aspartyl-peptidase"
                     /protein_id="HAY8828834.1"
                     /translation="MIDYTAAGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPS
                     DIVPNCTVVDLSGQILCPGFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVG
                     LLGTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDVAIIDRVIG
                     VKCAISDHRSAAPDVYHLANMAAESRVGGLLGSKPGVTVFHMGDSKKALQPIYDLLEN
                     CDVPISKLLPTHVNRNVPLFEQALEFARKGGTIDITSSIDEPVAPAEGIARAVQAGIP
                     LARVTLSSDGNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVKDYDFSISDALRPLTS
                     SVAGFLNLSGKGEILLGNDADLLVMTPELRIEQVYARGKLMVKDGKACVKGTFETA"
     gene            11544..12455
                     /gene="hypT"
                     /locus_tag="JNZ57_002657"
                     /gene_synonym="qseD"
     CDS             11544..12455
                     /gene="hypT"
                     /locus_tag="JNZ57_002657"
                     /gene_synonym="qseD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypochlorite stress DNA-binding transcriptional
                     regulator HypT"
                     /protein_id="HAY8828835.1"
                     /translation="MDDCGAVLHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSR
                     RIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRK
                     IKIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLL
                     EAPFDHIRLFESQLFPVCASDEYGEAIFNLAQPHFPLLNYSRNSYMGRLINRTLTRHS
                     ELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGQLVVLNRDELVIPIQAY
                     AYRMNTRMNPVAERFWRELRELEIVLS"
     gene            complement(12448..12840)
                     /gene="iraD"
                     /locus_tag="JNZ57_002658"
     CDS             complement(12448..12840)
                     /gene="iraD"
                     /locus_tag="JNZ57_002658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313312.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraD"
                     /protein_id="HAY8828836.1"
                     /translation="MMRQSLQAVLPEISGNKTSLLRKSVCSDLLTLFNSPHSALPSLL
                     VSGMPEWQVHNPSDKHLQSWYCRQLRSALLFHEPRIAALQVNLKEAYCHTLAISLEIM
                     LYHDDEPLTFDLVWDNGGWRSATLENVS"
     gene            complement(12837..>12909)
                     /locus_tag="JNZ57_002659"
     CDS             complement(12837..>12909)
                     /locus_tag="JNZ57_002659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828837.1"
                     /translation="HQYSGARCSGQAAYVAKRQECAK"
BASE COUNT         2880 a         3295 c         3335 g         3399 t
ORIGIN      
        1 ctaatgcctg catttgctct gccgaaagtc cggtatatcg ttgtatccat tcaggatcgg
       61 ccccattctg caacaacaat cggaggaggc tccgttcccc ttctactttc ccttctttcc
      121 tccccctctc ccttcccaac agccatccat cattatgaat tcgctctgca attgtcatta
      181 ttcgctccct gtggtgtggc attcgcctgg taagttcgct gataaacgcc ttaaaacgcg
      241 cttcatcgcc agtcagtaaa atgtaattta acagcgcagt tatctggctg tcattagcac
      301 actctgtaac cagtaatact accagttggt caataagccc catcaaatcg cgctggcgaa
      361 tatgcttttg gatcaactcc aacagggcga ctctgcgatg ctgcacaatc tcgtcgtctg
      421 gcacgacagt gacatccacc agcgggaacg ctgcgctata aagtttccgt gcggtagtcg
      481 gggcggcaaa ttcgtccagc cagcacaggg accaggggta aggactacgg ctaccgtgat
      541 aaaacagcat cgggataacc agcggtagcg gccggcgttt atcatgctcg atatggcgct
      601 gcatcaccgc catggaatat cgcatcaggc gaaatgccat atgaatatcc tcgcggctct
      661 gatgttcaat cactacgtaa atataaccat caccttcacg ggtctttacc gaccacagaa
      721 tatcggagtg tagcacccgc aatttttcat cgacaaagct ggcggattcc agttttaagc
      781 tgtcgagatc gcacagttca cgtaaatctt tgggtatgtg gatctccata aaatcccgcg
      841 cggtgtcagg gtgagtgaga aaggatttaa ataatgcgtc atgtggcgtg ctggtcgtga
      901 agtttgtcat ggcgatccgt cacctgtaga taagatggcc cgactttagc gactaacaaa
      961 accattctca cccggcaatt tctcgttccc cgaggtgctt tccaggcgtc tgcaaacgat
     1021 acatttttcc ggaaacaggc tcgcgtttta catttcctgt acccggcaga tattcccctt
     1081 tccaccgcgc tcttttgatt aaccgcaaat tttaattaca cttaaggtgt atattttcta
     1141 tgcaacccat caattaaaga ggtgtaatgt gctgatgact atttgtaatc gttatacatt
     1201 ctgacctgga gtcagaaggt atttctctgt ctgtgtgttc acaggcagtg tggttgatta
     1261 catgaaattc agtacatttg cagtctcgtt gcccttctcg cctgcctttc gtcattaccg
     1321 acggtattga atttcgtttt ccccgttggg gttctccgaa caaggagttg tttgttatgc
     1381 cacgtttttt tgcccgccat gccgccacgc tgtttttccc gatggcgttg attttgtatg
     1441 actttgccgc gtacctgtcg acggatctga tccagccggg gatcattaat gtggtccgtg
     1501 attttaatgc cgatgtcagt ctggccccgg cagccgtcag tctctatctc gcgggcggta
     1561 tggcgttaca gtggctgctg gggccgcttt ccgacaggat tggccgcagg ccggtgctga
     1621 ttaccggggc gctaatattt acccttgcct gcgctgcgac aatgttcaca acgtctatga
     1681 cacagtttct tatcgcgcgt gcaattcagg gcaccagtat ctgttttatt gccaccgttg
     1741 gttatgtcac ggtgcaggag gcgttcggcc agacaaaagg gatcaagttg atggcgatta
     1801 tcacctccat cgtactgatt gcgccgatta ttggcccgct ttccggcgca gctctgatgc
     1861 actttgtgca ctggaaagtc ctttttgcca tcattgcagt tatgggtttt atctcatttg
     1921 ttggcttact gctggcgatg ccagagacgg tgaagcgcgg cgcggttcca tttagcgcca
     1981 aaagcgtctt tcgcgatttt cgtaatgtct tttgcaatcg gctgttcctc tttggcgcag
     2041 caaccatctc tttaagctat atcccaatga tgagttgggt ggctgtctcg ccggtgatcc
     2101 tgatcgacgc gggcagctta acaacttcgc agttcgcctg gacacaggtt ccggtgttcg
     2161 gcgcggtgat tgtcgcgaat gccatcgtgg cgcgtttcgt taaagatccg accgaaccgc
     2221 gctttatctg gcgtgctgta cccattcaac tggtcggcct cgcgctgttg attatcggca
     2281 atctgctgtc accgcacgtc tggctgtggt cggtgctggg caccagtttg tatgctttcg
     2341 ggattggttt gatcttcccg accttattcc gctttacgct tttttccaat aacttaccga
     2401 aagggaccgt ctccgcatcg ctgaatatgg tgatcctgat ggtgatgtct gtctcggtcg
     2461 aaatcggccg ctggctgtgg tttaacggcg gtcgcttgcc gtttcatctg ttagccgtcg
     2521 tggcgggcgt tatcgtcgtt ttcaccctgg caggattgct taatcgcgtg cgccaacatc
     2581 aggctgccga gctggcggag gagcggtgat ttttgcgcga tcctgccgtc aggctctatt
     2641 cttaacgtta tgaataaact cattgaactc agacgcgcca aaatgttggc gctctcttta
     2701 ctgcttatcg ccgctgctac ctttgtcgtt acgctgtttt tgccgcccaa tttttgggtg
     2761 agcggcgtga aggcgattgc tgaagcggcg atggtcggcg cgctggcgga ctggtttgcg
     2821 gtggtggcgc tgtttcgccg cgtgccgatt ccgatcattt ctcgtcatac ggcgattatc
     2881 ccgcgtaata aagaccggat tggcgaaaat ctcggtcagt tcgtgtagga aaaatttctc
     2941 gatacccagt cgctggtggc attgattcga cgtcacgaac cggcgttgtt gattggcaac
     3001 tggtttagtc agccggagaa cgcccgccgc gttggtcagc atctgttgca gatcatgagc
     3061 ggttttcttg aactgaccga tgatgcgcgt attcagcgcc tgcttaagcg cgcggtccat
     3121 cgggcgattg ataaggtcga tctttccgga accagtgcgt tgatgctgga gagtatgacc
     3181 aaaaacgatc gtcatcaggt gctgctcgat acgctgatcg cacagttgat cgcccttctc
     3241 cagcgcgata aatcgcgcaa gtttattgcc cagcaaattg ttcgctggct ggagagcgag
     3301 catccgctga aagccaaaat tttgcctact gaatggctgg gcgaacatag cgcggagttg
     3361 gtttctgacg cggtgaattc tttgcttgat gatatcagcc gcgatcgtgc gcatcagatc
     3421 cgtcatgcgt ttgatcgcgc cacttttgcc ctgatcgaca agctgaaaaa cgatccggaa
     3481 atggcagcgc gagccgatgc cgtaaaaagt tatctgaaag aagatgaagc ttttaaccgc
     3541 tatctcagtg aattgtgggg ggatttacgg gaatggctga aagcggatat caacagtgaa
     3601 gattctcgtg tgaaagaacg tatcgcgcgg gcgggtcaat ggtttggcga aacgttaatt
     3661 gccgatgatg ccttgcgggc atcgttaaat ggtcacctgg aacaagccgc gcaccgcgtc
     3721 gcgcctgagt tttccgcatt cctgacgcgc cacatcagcg atacagtaaa aagctgggat
     3781 gctcgggata tgtcgcggca aatcgagtta aatatcggca aagatctgca gtttatccgt
     3841 gtcaacggta cgctggttgg cggttgtatt gggctaattt tatatttgtt gtcgcagctc
     3901 ccggccttgt tccccctcag caatttttag aaatccatga aaaactaagt ggctaaccgc
     3961 gagagagatc aaataaacca cactaaaaga atggtaataa tgtggcctct tttcattatc
     4021 tcccgtggta cggggaagga aaatcatgtc acttatcacc gatctacccg ccattttcga
     4081 tcagttctct gaagctcgcc agaaaggctt tctcaccgtc atggatctca aggagcgcgg
     4141 cattccgctg gttggcactt actgcacctt tatgccgcaa gagatcccga tggcagccgg
     4201 tgcggttgtg gtttcgctct gttctacctc tgatgaaacc attgaagaag cggagaaaga
     4261 tctgccgcgc aacctctgcc cgctgattaa aagcagctac ggcttcggca aaaccgataa
     4321 atgcccctac ttctactttt cggatctggt ggtcggtgaa accacctgcg acggcaaaaa
     4381 gaaaatgtat gaatacatgg cggagtttaa gcccgttcat gtgatgcagt tgccgaacag
     4441 cgttaaggac gatacctcgc gtgcgttatg gaaagccgag atgctgcgct tgcaaaaaac
     4501 ggtagaagaa cgttttgggc acgagattag cgaagatgct ctgcgcgatg ccattgcgct
     4561 gaaaaaccgc gaacgtcgcg cactggccaa tttttatcat cttgggcagt taaatcctcc
     4621 ggcgcttagc ggcagcgaca ttctgaaagt ggtctacggc gcaaccttcc ggttcgataa
     4681 agaggcgttg atcaatgaac tggatgcaat gaccgcccgc gttcgtcagc agtgggaaga
     4741 aggccagcga ctggacccgc gtccacgcat tttaatcacc ggctgcccga ttggcggcgc
     4801 agcaaaaaaa gtggtgcggg cgattgaaga gaatggcggc tgggttgtcg gttatgaaaa
     4861 ctgcactggg gcgaaagcga ccgagctaat gcgtggcgga aacgggcgat gtctacgacg
     4921 cgctggcgga taaatatctg gcgattggct gctcctgtgt ttcgccgaac gatcagcgcc
     4981 tgcaaatgct cagccagatg gtggaagaat atcaggtcga tggcgtagtt gatgtgattt
     5041 tgcaggcgtg ccatacctac gcggtggaat cgctggcgat taaacgtcat gtgcgtcagc
     5101 agcacaacat tccttatatc gctattgaaa cagactactc cacctcagat gtcgggcagc
     5161 tcagtacccg tgtcgcggcc tttattgaga tgctgtaagg agtggcagtg acatattcga
     5221 ttggcattga ttctggttct accgccacca aagggatctt actggcagac ggcgtgatta
     5281 cgcgccgttt cctcgttcca acaccctttc gtccggcaac agcaattact gaagcctggg
     5341 aaactctgcg cgaagggtta gagacaacgc cgtttctgac gctcaccggc tatggacggc
     5401 aactggtgga ttttgccgat aaacaagtga cggaaatctc ctgtcacggg ctgggcgcac
     5461 ggtttcttgc gccagcaacg cgcgcggtaa tcgacatcgg tggtcaggac agcaaagtga
     5521 ttcagcttga tgatgacggt aacctgtgcg atttcctgat gaatgacaaa tgcgcggcgg
     5581 gcaccgggcg tttcctggaa gtgatctcgc gcacgcttgg caccagcgtc gagcaactcg
     5641 acagcattac cgaaaatgtc acgccgcatg ccatcacgag tatgtgcaca gtgtttgccg
     5701 aatcagaagt gatcagcctg cgctcagcgg gcgtcgcgcc agaagcgatt ctcgccggag
     5761 tgattaacgc gatggcgcgg aggagtgcca atttcattgc tcgtctctcc tgtgaagcgc
     5821 cgattctgtt tactggtggc gttagtcatt gccagacgtt tgcccggatg ctggaatctc
     5881 acctgggaat gccggtaaat acccatcctg atgcgcaatt tgctggcgca attggcgcgg
     5941 cggtaattgg tcaacgagtg aggacacgcc gatgaaagag tttttatttt tatttcactc
     6001 cacagtcggc gtcatacaaa cccgcaaagc gttgcaggca gcgggcatga cttttcgcgt
     6061 cagcgatatt ccccgtgatt tacgcggcgg ctgcgggtta tgcatttggc tgacctgtcc
     6121 ccccggcgag gaaatacaat gggtgatccc tgggctgact gagtcaattt attgccagca
     6181 ggatggtgtc tggcgctgca ttgcacatta ccgggtttct ccgcgttaag gattcattaa
     6241 ggtcgctacg tatacttctc gatatcttat tgatttgcct taaagggatt accgtgacaa
     6301 aaagtatttc gttaagtaaa cgcatctccg ttattgtgat tctttttgcc attgtggcag
     6361 tgtgtacttt cttcgtgcaa tcttgcgccc gtaaaagcaa tcatgcagca tcatttcaga
     6421 attaccacgc caccattgac ggcaaagaaa ttgcaggcat aacgaataat atctcttcgc
     6481 tgacctggtc ggcacaaagc aatactcttt ttagcactat caacaaacct gccgccattg
     6541 ttgaaatgac caccaatggt gattttatcc gcacaattct tctggatttt gttaaggatc
     6601 tcgagacgat cgaatacatt ggcgataatc agtttgtcat tagcgatgag cgcgattacg
     6661 ccatttatgt gatttcactg accccaaact cggaagtaaa aatcctcaaa aaaataaaaa
     6721 tcccgctgca agactcccca accaattgcg gttttgaagg gttggcttat tctcgccagg
     6781 atcacacttt ctggtttttt aaagagaaaa atccgattga ggtctacaaa gttaacgggc
     6841 tgttaagtag caatgaatta cacatcagca aagacgaggc actacaacgg caatttactt
     6901 tagatgatgt gtccggcgca gaatttaacc agcaaaaaaa tacgcttctg gtgctgtctc
     6961 atgaatctcg cgcactccag gaagtaaccc tggttggcga ggttatcggt gaaatatcac
     7021 taaccaaagg tagtcgaggt ttgtcgcata acatcaaaca ggccgaaggg attgcgatgg
     7081 atgcctctgg taatatttat atcgttagcg aaccaaatcg tttttatcgc tttaccccta
     7141 aatcatcgca ttaacaggct ggcatatttc acctttttgt tattaacttg ttaacaacaa
     7201 aaatgacata caaggttaaa catgccttcg tcctcgcatc ccgtagaacg cttttctttc
     7261 agcaccgcgc ttttcgggat gctggttctg accctaggta tgggattagg tcgcttcctt
     7321 tatacgccta tgttgcccgt cattatggcg gaaggggcgt tttcatttag ccagctctcg
     7381 tggattgcca gcggcaacta tgcggggtat ctggctggca gtctgctatt ttcgtttggc
     7441 gcatttcacc agccgtcgcg cctacgccca tttctgttgg tttctgccct ggcgagcggg
     7501 ttgttgatcc tcgcaatggc atggttgccg ccatttattc tggtgttatt gattcgcttc
     7561 ctggcgggtg tcgccagcgc cggtatgctg atttttggtt cgacgctgat tatgcagcac
     7621 acgcgccatc cttttgtgct ggcagctttg ttttctggcg ttggcattgg cattgcactg
     7681 ggcaacgaat atgttctggc aggcctgcat tttgccttct cctcgcaaac gttatggcaa
     7741 ggcgccgggg cgctttctgg catgatgctg attgcactta cgcttttaat gccctcgaaa
     7801 aaacacgcca tcgcaccaat gccattggca aaaacggagc aacagataat gagctggtgg
     7861 ttactggcta ttctgtacgg ccttgcggga tttggttata tcatcgtcgc gacttacctg
     7921 ccgctcatgg cgaaagatgc aggctcacca ttgttaaccg cccatctctg gacgttagtc
     7981 ggcttatcaa ttgtgccagg ctgctttggc tggctatggg cagcaaaacg ttggggggct
     8041 ttgccttgcc tgacggcgaa tttgctggtg caggctatca gtgtgctgct tactctcgcc
     8101 agcgactctc ctctcttgct tatcattagt agtatcggtt ttggcggtac ctttatgggc
     8161 acgacatctc tggtgatgac tatcgcccgc caactgagcg ttccgggaaa tctcaatctt
     8221 ttaggctttg tgacgctcat ttacggcatt ggacaaatcc tcggcccggc gctgaccagt
     8281 atgctcggca atggaacatc ggcgcttgcc ggcgccactc tctgcggcgc ggcggcgttg
     8341 tttattgctg cgcttatcag cacagtacaa ttatttaagc tgcaagtggt cacttcatga
     8401 ggagtgtttc ccttaccact caagaaattc gaccgcaacc gttgatgtca gccagactcc
     8461 gttttccgct tgccagaaag gaatgcctcg tttcgccatt tcctgtgctt tgacggttaa
     8521 gacaaccggc gatccgtgtc ttgctcccac tttgcgtgcc gttgcttcat cagcagagag
     8581 atgcacgtaa tgacgatccc ctgcaatcag cccctgtttt tttatctcgt caaggaaacg
     8641 gcttgccgta ccgtggtaga gaaactgtgg cggtgttttt tcggcaaagg aaatagcgac
     8701 ctgcgaagtc gaatgcccct gaaccgcgcg gatgcaccta ccatcactgg aataactaaa
     8761 acgcttttta tcgctggttg cgaccacggt atccagcaat gcacgggtta atcgcttgcc
     8821 cgctttttgg gcacaaagta tgagcttatc gatatccgcc catccttcac ggtccagtac
     8881 gataccaatc gcctccggtt tgtgtcggag gacaaaactt aaaaacttgc tcgtatccgc
     8941 cagctctttt tcgttgtgct ttgccatctc gttttcgtcc ctggattttc tgtttttatt
     9001 taccaatgtc attgtcactg ggtttatgaa ttttctgcaa ctcaatcctg cgcagaacct
     9061 tttccacaca gcgtaatgtt tcccctatgc aaaaaacgca tagccagaaa catacttgca
     9121 ttttccccat acccacatgg ctgataaggt ttttcagttc caggaatttt cctggctcaa
     9181 gcaacacaca aacacaaaaa aacaatgggg attgttatga cacaacaagg ggatgctgta
     9241 gccggggagc tggcgacaga aaaagtgggc attaaagggt atctggcttt ttttctcacc
     9301 ataatctttt tttccggtgt tttttccgga acagacagct ggtggcgcgt ttttgatttt
     9361 tccgttctga acggatcgtt tgggcaactg cctggtgcga acggagccac cacctcattt
     9421 cgcggcgcgg gtggtgcggg ggctaaagat ggctttctct ttgcgctgga gctggcaccg
     9481 tcagtcattc tctctctggg gattatttca attaccgatg gtcttggtgg attacgcgcc
     9541 gcgcagcagt taatgacacc tgtgctaaaa ccgttgttgg gcattccagg gatctgctcg
     9601 ctggcgctga tcgctaactt gcaaaacact gatgccgccg ccggtatgac caaagagctg
     9661 gcgcaggaag gtgaaattac cgaacgcgat aaagtgattt tcgccgcata tcaaaccagc
     9721 ggtagcgcca tcatcaccaa ctacttctct tccggcgtcg cggtgttcgc ctttctgggc
     9781 acgtccgtaa tcgtaccttt agccgtcatc ctggtgttta aatttgtcgg agccaacatt
     9841 ttgcgcgtct ggcttaactt cgaagaacgt cgcaacccaa cgcaaggagc gcaagcatga
     9901 caactcaggt ccgcaaaaac gtcatggata tgtttatcga tggcgcgcgc cgtggcttta
     9961 ctatcgccac gaccaacctg ctgccaaacg tggtgatggc gtttgtcatc attcaggcgc
    10021 tgaaaattac cggcctgctc gactgggtgg ggcatatctg tgaacccgta atggcgcagt
    10081 cggtgttgcc gccagtctgg caaccgctgg cgcattaacc ggtcacgatg tcaccgtttt
    10141 actgcccgcg atgtatttaa tgggcaaccc ggtgcaaaat gtcggtcgct gcctggggac
    10201 agccgaagtg aatgccaaat attacccgca tatcattacg gtctgcgtga ttaacgcatt
    10261 gctgtcgatc tgggttatgc agcttattgt ttaacaagga gttaccatga ttgattatac
    10321 cgcagccggt tttaccctgc tgcagggagc gcatttgtat gcaccggaag atcggggaat
    10381 ttgcgatgtc ctcgtcgcta acggcaaaat tatcgccgtt gccagcaata tcccttctga
    10441 cattgtaccg aactgcacgg ttgtcgatct cagtgggcag atcctctgcc caggttttat
    10501 tgatcaacac gtccatttga ttggcggtgg cggcgaagca ggtcccacga cgcgcacgcc
    10561 ggaagtggcg ctaagtcgcc tgacggaagc gggcgtcacg tcagtggttg gtctgctggg
    10621 caccgactct atctctcgcc acccggaatc cctgctcgcc aagacccgtg cgctcaatga
    10681 agaaggcatc agcgcctgga tgctgaccgg cgcttatcat gtcccttccc gcactattac
    10741 gggttccgtg gaaaaagacg tggcgattat cgatcgtgtg attggcgtga aatgcgccat
    10801 ctctgatcac cgttctgccg caccggacgt ttatcacctg gctaatatgg cggcagaatc
    10861 ccgcgttggc ggtttgctcg gcagtaaacc tggcgtcacc gtgttccaca tgggcgacag
    10921 taaaaaggcg ttacagccta tttatgacct gctggaaaac tgcgatgtgc cgatcagcaa
    10981 gctgctgccg acccacgtta accgcaacgt accgttgttt gagcaggcgc tggagttcgc
    11041 gcgcaaaggc ggcaccatcg atatcaccag cagcattgac gaaccggtcg cccctgccga
    11101 aggtattgcc cgcgccgttc aggcgggtat tccgctggca cgcgtcaccc tcagctccga
    11161 cggcaacggt agccagccgt tcttcgatga cgaagggaat ttaacccata tcggtgttgc
    11221 aggttttgaa acgttgctgg aaaccgtgca ggtgctggtc aaagactatg atttcagtat
    11281 cagcgatgcc ctgcgcccgc tcaccagtag cgtagccggt ttccttaacc tgagcgggaa
    11341 aggcgaaatt ctgcttggca atgacgcaga cttactagtc atgacgccag aattgcgcat
    11401 tgagcaggta tatgctcgcg gcaaactgat ggtcaaagac ggcaaagcct gcgtgaaagg
    11461 aacgtttgaa acggcttaaa cggttgtcag ccgccctaat ggacgtagaa tgcccgcaag
    11521 ggcggctgac agagtaaaac gtaatggatg actgtggtgc ggttttgcat aatattgaaa
    11581 ccaaatggct ttatgatttt ctgaccctgg aaaaatgccg caatttttcc caggcggcag
    11641 tcagtcgtaa cgtctcgcaa ccggcattca gccgccgcat ccgcgcgctg gaacaggcga
    11701 ttggcgttga attgtttaac cgccaggtga cgccgctgca actctcagaa caagggaaaa
    11761 tcttccattc gcagatccgc catctgttgc aacagttaga aagtaacctt gcagagctgc
    11821 gtggcggcag cgattacgcg caacgtaaaa tcaagatagc cgctgcacac tctctttccc
    11881 tcggtctgtt accgtccatt atcagccaga tgccgccgct ctttacctgg gcgattgaag
    11941 ctattgatgt cgatgaagca gtcgataaac tgcgtgaagg gcaaagtgac tgtatttttt
    12001 cctttcacga cgaagatttg ctggaagcac cgtttgacca cattcgctta tttgaatctc
    12061 aattgttccc cgtttgcgcc agtgacgaat acggagaagc aatttttaac ctcgcgcagc
    12121 cacactttcc gttactgaat tacagccgca actcctatat ggggcgattg attaatcgca
    12181 ccctgacgcg ccacagcgag ttaagtttca gcaccttttt tgtctcttcg atgagcgagc
    12241 tattaaagca ggttgccctc gacggctgtg ggattgcctg gctgccggag tatgccatcc
    12301 aacaagaaat tcgcagcggg caactcgttg tgctgaatcg ggacgaactg gtgatcccga
    12361 ttcaggccta cgcataccgt atgaataccc gcatgaatcc agttgccgaa cgcttctggc
    12421 gtgaactgcg cgagctggag attgtgctta gctgacattc tcaagcgtcg cactgcgcca
    12481 accgccatta tcccagacca gatcaaacgt tagcggttca tcgtcgtggt acagcattat
    12541 ctcaaggctg atcgccagag tgtggcagta cgcttctttc aaattaacct gcaacgccgc
    12601 aatccgtggc tcatgaaata acagtgcaga acgcagctga cggcaatacc agctctggag
    12661 atgtttgtcg ctcgggttat gcacttgcca ctcgggcatg cctgaaacaa gtaatgacgg
    12721 taatgccgaa tgaggagaat taaaaagagt gaggagatcg ctgcataccg atttacgcag
    12781 caatgacgtt ttattgcctg aaatttcagg taaaacagcc tgaagtgatt ggcgcatcat
    12841 tttgcgcact cctgacgttt agcaacatat gcggcttgcc ctgaacaccg ggcaccactg
    12901 tattgatgc
//
LOCUS       DADMHC010000116        12722 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.116, whole genome shotgun sequence.
ACCESSION   DADMHC010000116 DADMHC010000000
VERSION     DADMHC010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12722)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12722)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12722
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.116"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..880)
                     /gene="rarD"
                     /locus_tag="JNZ57_002660"
     CDS             complement(<1..880)
                     /gene="rarD"
                     /locus_tag="JNZ57_002660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HAY8828838.1"
                     /translation="MDAKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVI
                     WSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEA
                     SLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFS
                     FAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADSSTSHMGQNPMLLNLLLIA
                     AGIVTTVPLLCFTAVATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFI
                     WVALAIFVMDAIYTQRR"
     gene            complement(932..1399)
                     /locus_tag="JNZ57_002661"
     CDS             complement(932..1399)
                     /locus_tag="JNZ57_002661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001350877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HAY8828839.1"
                     /translation="MSAVLTAEQALKLVGEMFVYHMPFNRALGMELERYEKEFAQLAF
                     KNQPMMVGNWAQSILHGGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTI
                     DLRVDYLRPGRGERFTATSSLLRAGNKVAVARVELHNEEQLYIASATATYMVG"
     gene            1564..2433
                     /gene="pldA"
                     /locus_tag="JNZ57_002662"
     CDS             1564..2433
                     /gene="pldA"
                     /locus_tag="JNZ57_002662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HAY8828840.1"
                     /translation="MRTLQGWLLPVFMLPMAVYAQEATVKEVHDAPAVRGSIIANMLQ
                     EHGNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGIL
                     GPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGY
                     NHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLK
                     IGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQ
                     TRVGVGVMLNDLF"
     gene            2566..4395
                     /gene="recQ"
                     /locus_tag="JNZ57_002663"
     CDS             2566..4395
                     /gene="recQ"
                     /locus_tag="JNZ57_002663"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026263.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HAY8828841.1"
                     /translation="MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCL
                     VVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTRE
                     QQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRP
                     EYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLM
                     EKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRA
                     DVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPA
                     EAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEG
                     RQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDY
                     GHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTEAARPVLRGESSL
                     QLAVPRIVALKPKAMQKSFGGNYDRKLFAKLRKLRKSIADESNVPPYVVFNDATLIEM
                     AEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAHVDGDDEE"
     gene            4459..5079
                     /gene="rhtC"
                     /locus_tag="JNZ57_002664"
     CDS             4459..5079
                     /gene="rhtC"
                     /locus_tag="JNZ57_002664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine export protein RhtC"
                     /protein_id="HAY8828842.1"
                     /translation="MLMLFLTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLG
                     ITCGVMVWAGIALLGLHLIIEKMAWLHTLIMVGGGLYLCWMGYQMLRGALKKEAVSAP
                     APQIELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNVGTTARWGIFALIIVET
                     LAWFTVVASLFALPQMRRGYQRLAKWIDGFAGALFAGFGIHLIISR"
     gene            complement(5141..5761)
                     /gene="rhtB"
                     /locus_tag="JNZ57_002665"
     CDS             complement(5141..5761)
                     /gene="rhtB"
                     /locus_tag="JNZ57_002665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine/homoserine lactone efflux protein"
                     /protein_id="HAY8828843.1"
                     /translation="MTLEWWFAYLLTSIILSLSPGSGAINTMTTSLNHGYRGAVASIA
                     GLQTGLAIHIVLVGVGLGTLFSRSVIAFEVLKWAGAAYLIWLGIQQWRAAGAIDLKSL
                     ASTQSRRHLFQRAVFVNLTNPKSIVFLAALFPQFIMPQQPQLMQYIVLGVTTIVVDII
                     VMIGYATLAQRIALWIKGPKQMKALNKIFGSLFMLVGALLASARHA"
     gene            5874..6896
                     /gene="pldB"
                     /locus_tag="JNZ57_002666"
     CDS             5874..6896
                     /gene="pldB"
                     /locus_tag="JNZ57_002666"
                     /EC_number="3.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipase L2"
                     /protein_id="HAY8828844.1"
                     /translation="MFQQQKDWETRENAFAAFTMGPLTDFWRQRDEAEFTGVDDIPVR
                     FVRFRAQHHDRVVVICPGRIESYVKYAELAYDLFHLGFDVLIIDHRGQGRSGRLLADP
                     HLGHVNRFNDYVDDLAAFWQQEVQPGPWRKRYILAHSMGGAISTLFLQRHPGVCDAIA
                     LTAPMFGIVIRMPSFMARQILNWAEAHPRFRDGYAIGTGRWRALPFAINVLTHSRQRY
                     RRNLRFYADDPTIRVGGPTYHWVRESILAGEQVLAGAGDDATPTLLLQAEEERVVDNR
                     MHDRFCELRTAAGHPVEGGRPLVIKGAYHEILFEKDAMRSVALHAIVDFFNRHNSPSG
                     NRSTEV"
     gene            6904..7704
                     /gene="yigL"
                     /locus_tag="JNZ57_002667"
     CDS             6904..7704
                     /gene="yigL"
                     /locus_tag="JNZ57_002667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar/pyridoxal phosphate phosphatase YigL"
                     /protein_id="HAY8828845.1"
                     /translation="MYQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGINFVFATGR
                     HHVDVGQIRDNLEIKSYMITSNGARVHDLDGNLIFAHNLDRDIASDLFGVVNDNPDII
                     TNVYRDDEWFMNRHRPEEMRFFKEAVFKYALYEPGLLEPEGVSKVFFTCDSHEQLLPL
                     EQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMND
                     AEMLSMAGKGCIMGSAHQRLKDLHPELEVIGTNADDAVPHYLRKLYLS"
     gene            7780..8679
                     /gene="bioP"
                     /locus_tag="JNZ57_002668"
     CDS             7780..8679
                     /gene="bioP"
                     /locus_tag="JNZ57_002668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter"
                     /protein_id="HAY8828846.1"
                     /translation="MALLIITTILWAFSFSFYGEYLAGHVDSYFAVLVRVGLAALVFL
                     PFLRTRGNSLKTVGLYMLVGAMQLGVMYMLSFRAYLYLTVSELLLFTVLTPLYITLIY
                     DIMNKRRLRWGYAFSALLAVIGAGIIRYDQVTDHFWTGLLLVQLSNITFAIGMVGYKR
                     LMETRPMPQHNAFAWFYLGAFLVAVIAWFLLGNAQKMPQTTLQWGILVFLGVVASGIG
                     YFMWNYGATQVDAGTLGIMNNMHVPAGLLVNLAIWHQQPHWPTFITGALVILASLWVH
                     RKWVAPRSSQTADDRRRDCALSE"
     gene            complement(8567..9520)
                     /gene="metR"
                     /locus_tag="JNZ57_002669"
     CDS             complement(8567..9520)
                     /gene="metR"
                     /locus_tag="JNZ57_002669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MetR"
                     /protein_id="HAY8828847.1"
                     /translation="MIEVKHLKTLQALRNCGSLAAAAATLHQTQSALSHQFSDLEQRL
                     GFRLFVRKSQPLRFTPQGEILLQLANQVLPQISQALQACNEPQQTRLRIAIECHSCIQ
                     WLTPALENFHKNWPQVEMDFKSGVTFDPQPALQQGELDLVMTSDILPRSGLHYSPMFD
                     YEVRLVLAPDHPLAAKTRITPEDLASETLLIYPVQRSRLDVWRHFLQPAGVSPSLKSV
                     DNTLLLIQMVAARMGIAALPHWVVESFERQGLVVTKTLGEGLWSRLYAAVRDGEQRQP
                     VTEAFIRSARNHACDHLPFVKSAERPTYDAPTVRPGSPARL"
     gene            9756..12017
                     /gene="metE"
                     /locus_tag="JNZ57_002670"
     CDS             9756..12017
                     /gene="metE"
                     /locus_tag="JNZ57_002670"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HAY8828848.1"
                     /translation="MTILNHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELR
                     ARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRG
                     RAPTGEPAAAAEMTKWFNTNYHYMVPEFVKGQQFKLTWTQLLEEVDEALALGHNVKPV
                     LLGPVTWLWLGKVKGEQFDRLSLLNDILPVYQQVLAELEKRGIEWVQIDEPALVLELP
                     QAWLDAYKPAYDALQGQVKLLLTTYFEGVTPNLDTITALPVQGLHVDLVHGKDGVAEL
                     HKRLPSDWLLSAGLINGRNVWRADLTEKYAQIKDIVGKRDLWVASSCSLLHSPIDLSV
                     ETRLDAEVKSWFAFALQKCHELALLRDALKSGDTAALAEWSAPIQARRHSTRVHNPAV
                     EKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKG
                     NLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGW
                     VQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPRE
                     DVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEA
                     FRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEEFDY
                     PNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAAL
                     ANMVQAAQNLRRG"
     gene            complement(12302..12547)
                     /locus_tag="JNZ57_002671"
     CDS             complement(12302..12547)
                     /locus_tag="JNZ57_002671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HAY8828849.1"
                     /translation="MITETEINVLKVMAEKDINWNWMNLDRTLSIRQISGFGNVVNIV
                     NKLANEGLVIIEDSGHKSMPHYHVTEKGYNFVKSENK"
BASE COUNT         3014 a         3221 c         3400 g         3087 t
ORIGIN      
        1 ttctacgctg cgtataaatc gcatccatca caaaaattgc cagcgccacc caaataaagg
       61 cgaaggtcac catcttatcg gcacccggtt tttcaccata aaacgtcact gccaacagga
      121 acatcagcgt cgggccaata tactggaaga agcctaacgt ggagagacgc aggcgtgtag
      181 caactgcggt aaaacacaac agcggtacgg tggtgacaat accggcggcg atcagcagca
      241 aattcagcaa catcgggttt tgccccatat ggctggttga gctgtcggca atagcaaaca
      301 gataaatcgc cgccacgggc agcagccaca tggtttcgat taacatgccg gtttgcgctt
      361 caacggcaat tttcttgcgt accagtccgt agaaggcaaa actaaacgcc agccccagcg
      421 cgatgattgg cagcgaacca aaagtccaca actgaaccaa cacgccacat atcgccagaa
      481 tcaccgccag ccattgcatc cggcggaatc gctcgccgag gaaaatcatc cccagcacaa
      541 tgttcaccag cgggttaata aagtaaccaa ggctcgcttc cagcatatgg tgattgttca
      601 ccgcccagat aaacagtagc cagttgccac caatcagcac ggcagagact gccagcataa
      661 aaattttctg tggcgtctga atcagcgttt ttaaatagga ccactggcgg caaatgctca
      721 tcagcaccac cataaagaaa aacgaccaga tcacgcgatg cgtcaggatc tcatcggcgg
      781 gcacgtagta aatcagcttg aagtatgctg gcgcaatacc ccaaataaaa taagcggcaa
      841 gagcgagtaa tacgccctgc cgcgtttgtt ttgcatccat cgggaatact catttttaat
      901 tggtaacagc agtttacctg cttttatgtc ttcaacctac catataggtg gcggtggcac
      961 tggcaatata aagctgttct tcattgtgta attcaacgcg ggcgacggcg actttattgc
     1021 ctgcacgcaa caggctactg gtagcagtaa aacgctcgcc cctgcctggg cgcagataat
     1081 caacgcgaag atcaatggtc cccatccgcg atagccgctg gcgtagttca tcttcactga
     1141 tggtttcgtg gcgggttaag gtacttccca cgcacaccag accggcggcg acatccagcg
     1201 ccgacgcaat gactccgccg tgcaaaatgc tttgcgccca gttacccacc atcatcggct
     1261 gatttttaaa ggccagctgt gcgaactctt tttcgtaacg ctccagctcc atccctaacg
     1321 cgcggttaaa tggcatgtga taaacaaaca tctcacccac taatttcagg gcttgttcag
     1381 cggtcagtac ggcagacata tcatccttac acttcattgg ttaatgaaat gttgatttta
     1441 tgcttctttg ttgttagttt ctactttagg aagggataac taacggcaat ggagttaagt
     1501 atgtaaaata gcccgcagaa aaacattcac cttatcaata attcgttacg gagaacacga
     1561 ccgatgcgga ctctgcaggg ctggttgttg ccggtgttta tgttgcctat ggcagtatat
     1621 gcacaagagg caacggtgaa agaggtgcat gacgcgccag cggtgcgtgg cagtattatc
     1681 gccaatatgc tgcaggagca tggcaatccg ttcacgctct atccttatga cactaactac
     1741 ctcatctaca cccaaaccag cgatctgaac aaagaagcga ttgccagtta cgactgggcg
     1801 gaaaatgcgc gtaaggatga agtaaagttt cagttgagcc tggcatttcc actgtggcgt
     1861 gggattttag gcccgaactc ggtgttgggt gcgtcttata cgcaaaaatc ctggtggcaa
     1921 ctgtccaata gcgaagagtc ttcaccgttt cgtgaaacca actacgaacc gcaattgttc
     1981 ctcggttttg ccaccgatta ccgttttgca ggttggacgc tgcgcgatgt ggagatgggg
     2041 tataaccacg actctaacgg gcgttccgac ccgacctccc gcagctggaa ccgcctttat
     2101 actcgcctga tggcagaaaa cggtaactgg ctggtagaag tgaagccgtg gtatgtggtg
     2161 ggtaatactg acgataaccc ggatatcacc aaatatatgg gttactacca gcttaaaatc
     2221 ggctatcacc tcggtgatgc ggtgttgagt gcgaaaggac agtacaactg gaataccggt
     2281 tacggcggcg cggagttagg cttaagttac ccgatcacca aacatgtgcg cctttatact
     2341 caggtttaca gcggctatgg cgaatcgctc atcgactata acttcaacca gacccgtgtc
     2401 ggtgtaggag ttatgctaaa cgacttgttt tgatgaacgg ttgagtggtt ggcaaatctg
     2461 gaacccagca tccaggatta ccctctcaga gactaaaagc attgcagttt ctcgcgcagg
     2521 cgctgaaaat agcgcctgtt tttatttcag gcaatcgggg tgaatgtggc gcaggcggaa
     2581 gtgttgaatc tggagtccgg agctaaacag gttttacaag aaacctttgg ctaccaacag
     2641 tttcgccccg gccaggaaga aattatcgac actgtgcttt ccggtcgcga ttgcctggtc
     2701 gtcatgccca ccggtggcgg aaaatccctt tgctatcaaa ttcctgcctt attgctaaac
     2761 ggccttaccg tggttgtttc accgctgatt tcgttgatga aagatcaggt ggatcaactg
     2821 caagccaacg gcgtggcggc ggcgtgcctt aactcgacgc aaacccgcga gcagcaactt
     2881 gaagtgatga caggctgccg caccgggcaa attcgtctgc tttatatcgc cccggaacgc
     2941 ctgatgctgg ataactttct tgagcatctg gcgcactgga atccggtgtt attagccgtt
     3001 gatgaagcgc actgtatctc ccaatggggc cacgatttcc gcccggaata tgccgcgctt
     3061 ggtcagttac gccagcgttt cccgaccctg ccgtttatgg cgctgactgc cacagccgac
     3121 gacaccacgc gccaggatat cgtgcgcttg ctggggctga acgatccgct gattcaaatc
     3181 agcagttttg accgtccgaa tattcgctac atgctgatgg agaagttcaa accgctcgat
     3241 cagttgatgc gctacgtgca ggaacagcgc ggtaagtcag gcattatcta ctgcaacagc
     3301 cgcgcgaaag tagaagacac cgctgcgcgc ctgcaaagca agggaattag cgcggcggcc
     3361 tatcatgctg ggctggaaaa taatgttcgc gccgacgtgc aggaaaaatt tcagcgcgat
     3421 gacctgcaaa ttgtggtggc gacggtggcg ttcggcatgg gcatcaataa accaaacgtt
     3481 cgcttcgtgg tccactttga tattccgcgc aatatcgaat cctattatca ggaaaccggt
     3541 cgcgccgggc gtgatggcct gcccgcggaa gcgatgctgt tttacgatcc ggccgatatg
     3601 gcgtggctgc gccgttgcct ggaagagaag ccgcaggggc agttacagga tatcgaacgt
     3661 cataaactca atgcgatggg cgcttttgcc gaagcgcaaa cttgccgtcg tctggtattg
     3721 ctgaactatt ttggcgaagg gcggcaagag ccgtgcggga actgcgatat ctgcctcgat
     3781 ccgccgaaac agtacgacgg ttcaaccgat gctcagattg ccctttccac cattggtcgt
     3841 gtgaatcagc ggtttgggat gggttatgtg gtggaagtga ttcgtggtgc taataaccag
     3901 cgtatccgcg actatggtca tgacaaactg aaagtctatg gcatgggccg tgataaaagc
     3961 catgaacatt gggtgagcgt gatccgccag ctgattcacc tcggcctggt gacgcaaaat
     4021 attgcccagc attctgccct acaactgaca gaggccgcgc gcccggtgct gcgcggcgaa
     4081 tcctctttgc aacttgccgt gccgcgtatc gtggcgctca aaccgaaagc gatgcagaaa
     4141 tcgttcggcg gcaactatga tcgcaaactg ttcgccaaat tacgcaaact gcgtaaatcg
     4201 attgccgatg aaagtaatgt cccgccgtac gtggtgttta acgacgcaac cttgattgag
     4261 atggctgaac agatgccgat caccgccagc gaaatgctca gcgttaacgg cgttgggatg
     4321 cgcaagctgg aacgctttgg taaaccgttt atggcgctga ttcgtgcgca tgtcgatggc
     4381 gacgacgaag agtagtcagc agcataaaaa agtgccagga tgaagactcc gtaaacgttt
     4441 cccccgcgag tcaaatgtat gttgatgtta tttctcaccg tcgccatggt gcacattgtg
     4501 gcgcttatga gccccggtcc cgatttcttt tttgtctctc agaccgctgt cagtcgttcc
     4561 cgtaaagaag cgatgatggg cgtgctgggt attacctgcg gcgttatggt ttgggcaggg
     4621 attgcgttgc ttggcctgca tttgattatc gaaaaaatgg cctggctgca tacgctgatt
     4681 atggttggcg gtggcctgta tctctgctgg atgggttacc agatgctacg cggtgcactg
     4741 aaaaaagagg ctgtatctgc gcctgcacca cagattgagc tggcgaaaag cgggcgcagt
     4801 ttcctgaaag gtttactgac caatctcgct aatccgaaag cgattatcta ctttggctcg
     4861 gtgttctcat tgtttgtcgg agataacgtt ggcactaccg cgcgctgggg catttttgcg
     4921 ctgatcattg tcgaaacact ggcgtggttt accgtcgttg ccagcctgtt tgccctgccg
     4981 caaatgcgcc gtggttatca acgtctggcg aagtggattg atggttttgc cggggcgtta
     5041 tttgccggat ttggcattca tttgattatt tcgcggtgat gccagacgcg tcttcagagt
     5101 aagtcggata aggcgtttac gccgcatccg acattatttt tcacgcatgc ctcgccgatg
     5161 ctaacagcgc tcccaccagc ataaacaacg agccgaaaat cttattcagc gccttcatct
     5221 gctttggtcc tttaatccat agagcaatcc gttgagcaag ggtggcgtaa ccgatcatca
     5281 caataatatc gactacaata gtggtgacgc cgagcacgat atactgcatc agttgcggct
     5341 gctgtggcat gatgaattgc ggaaatagcg ccgccagaaa cacaatactt ttgggattgg
     5401 tgagattcac aaaaactgcg cgctggaaca aatgtcgacg cgattgagta gaggccagcg
     5461 atttaaggtc aattgcacca gcggcgcgcc actgctggat tcccagccaa atcaagtaag
     5521 ccgcgcctgc ccacttcaac acttcaaacg caatcactga gcgggaaaat agcgtcccca
     5581 accccacgcc aaccagcaca atatgaatcg ccagtccggt ctgaagccca gcaatagacg
     5641 ccaccgcgcc gcgataaccg tggttgagcg aggtggtcat agtgttgatt gcaccagagc
     5701 ctggcgacag gcttaaaatg atcgatgtca gcaggtaggc aaaccaccat tctaaggtca
     5761 tgatgaactc ccggtgtgtc tatttttgtg ccacaatacg ctactgtcgc agcgttgtgt
     5821 caggcacgct aaaaaaaaaa cgattttacg tggtttaaga ggcagattac ccgatgtttc
     5881 agcagcaaaa agactgggaa acaagagaaa acgcgtttgc tgcttttacc atgggaccgc
     5941 tgactgattt ctggcgtcag cgtgatgaag cagagtttac tggtgtggat gacattccgg
     6001 tgcgctttgt ccgttttcgc gcacagcacc atgaccgggt ggtagtcatc tgcccggggc
     6061 gtattgagag ctacgtaaaa tatgcggaac tggcctatga cctgttccat ttggggtttg
     6121 atgtcttaat catcgaccat cgcgggcagg gacgttccgg tcgcctgtta gccgatccgc
     6181 atctcgggca tgttaatcgc tttaatgatt atgttgatga tctggcggca ttctggcagc
     6241 aggaggtcca gcccggtccg tggcgtaaac gctatatact ggcacattcg atgggcggtg
     6301 cgatctccac attatttctg caacgccatc caggtgtatg tgacgccatt gcgctaactg
     6361 cgccaatgtt tgggatcgtg attcgtatgc cgtcatttat ggcacggcag atcctcaact
     6421 gggccgaagc gcatccacgt ttccgtgatg gctatgcaat aggcaccggg cgctggcgcg
     6481 cgttgccgtt tgctatcaac gtactgaccc acagcagaca gcgatatcga cgtaacttac
     6541 gcttctatgc tgatgaccca acgattcgcg tcggtgggcc gacctaccat tgggtacgcg
     6601 aaagtattct ggctggcgaa caggtgttag ccggtgcggg tgatgacgcc acgccaacgc
     6661 ttctcttgca ggctgaagag gaacgcgtgg tggataaccg catgcatgac cgtttttgtg
     6721 aactccgcac cgccgcgggc catcctgtcg aaggaggacg gccgttggta attaaaggtg
     6781 cttaccatga gatccttttt gaaaaggacg caatgcgctc agtcgcgctc cacgccatcg
     6841 ttgatttttt caacaggcat aactcaccca gcggaaaccg ctctacagag gtttaaattt
     6901 cttatgtacc aggttgttgc gtctgattta gatggcacgt tactttctcc cgaccatacg
     6961 ttatcccctt acgccaaaga aactctgaag ctgctcaccg cgcgcggcat caactttgtg
     7021 tttgcgaccg gtcgtcacca cgttgatgtg gggcaaattc gcgataatct ggagattaag
     7081 tcttacatga ttacctccaa tggtgcgcgc gttcacgatc tggatggtaa tctgattttt
     7141 gctcataacc tggatcgcga cattgccagc gatctgtttg gcgtagtcaa cgacaatccg
     7201 gacatcatta ctaacgttta tcgcgacgac gaatggttta tgaatcgcca tcgcccggaa
     7261 gagatgcgct tttttaaaga agcggtgttc aaatatgcgc tgtatgagcc tggattactg
     7321 gagccggaag gcgtcagcaa agtgttcttc acctgcgatt cccatgaaca actgctgccg
     7381 ctggagcagg cgattaacgc tcgttggggc gatcgcgtca acgtcagttt ctctacctta
     7441 acctgtctgg aagtgatggc gggcggcgtt tcaaaaggcc atgcgctgga agcggtggcg
     7501 aagaaactgg gctacagcct gaaggattgt attgcgtttg gtgacgggat gaacgacgcc
     7561 gaaatgctgt cgatggcggg gaaaggctgc attatgggca gtgcgcacca gcgtctgaaa
     7621 gaccttcatc ccgagctgga agtgattggt actaatgccg acgacgcggt gccgcattat
     7681 ctgcgtaaac tctatttatc gtaatcgttc tttatttggt cagttgtcaa cctgatactt
     7741 cgctacaatg gatactcgtt aatcaaagag ttttccattg tggcgctact tatcatcacc
     7801 acgattctgt gggccttctc ctttagcttt tatggcgagt accttgcggg gcacgtcgat
     7861 agctattttg cggtgctggt gcgcgttggc ctggcggcac tcgtttttct gccgtttctg
     7921 cgtacccgtg gcaatagcct gaaaacagtc ggcctgtata tgctggtggg cgcgatgcag
     7981 ctcggcgtga tgtatatgct gagtttccgc gcttatctct atctgacggt ttccgaactg
     8041 ctgctgttca ccgtactgac gccgctctac atcacgctga tttatgacat catgaataag
     8101 cgccgtttgc gctggggata tgcttttagt gccttgttgg cggtgattgg tgccgggatt
     8161 attcgctatg atcaggtcac cgaccatttc tggactggct tgttgctggt gcaactctcc
     8221 aatatcactt ttgccatcgg catggtgggt tacaaacgcc tgatggaaac tcgcccgatg
     8281 ccgcagcata acgcctttgc gtggttctat cttggcgcgt tcctggtggc ggtaattgca
     8341 tggttcttgc tgggaaatgc gcagaaaatg ccgcaaacca cgttgcaatg gggcattctg
     8401 gtgtttcttg gcgtggtggc ttccgggatt ggctacttta tgtggaacta cggcgcgacg
     8461 caggtggacg ccggaacgct gggaattatg aataatatgc acgttccggc agggctgctg
     8521 gtaaacctgg ctatctggca ccaacagccg cactggccaa cgtttattac aggcgcgctg
     8581 gtgatcctgg cctcactgtg ggtgcatcgt aagtgggtcg ctccgcgctc ttcacaaacg
     8641 gcagatgatc gcaggcgtga ttgcgcgctg agcgaataaa cgcttccgta actggctgac
     8701 gctgctcgcc atcgcgcacg gcggcgtaca gtcggctcca caagccttcg cccagggttt
     8761 tggtcaccac cagaccctgg cgctcaaaac tctctactac ccaatgcggt agcgcggcaa
     8821 tacccatccg cgcggcaacc atctgaatca acaataaggt gttatcgacg cttttcagtg
     8881 acggactgac gcctgccggc tgaagaaaat gccgccagac atccagtcga ctacgctgca
     8941 ccggataaat taatagcgtc tcgctggcga gatcttccgg tgtaatacgc gtttttgccg
     9001 ccagtggatg gtcaggtgct aacaccagac gcacttcata gtcgaacatc ggcgaataat
     9061 gcagaccact gcgcggcaga atatcggacg tcattaccag atccagctct ccctgttgca
     9121 aggcgggctg cgggtcaaat gtcacgcccg atttaaagtc catctcgacc tgcggccagt
     9181 tcttatggaa attttctaac gcgggcgtca gccactgtat acagctatgg cactcaatgg
     9241 caatgcgcag acgcgtctgc tgcggttcat tgcaggcttg cagtgcctgg ctaatttgtg
     9301 gcagcacctg gtttgccagt tgcaacagga tttctccctg cggtgtaaag cgaagcggct
     9361 ggcttttacg cacaaatagc cggaagccaa ggcgttgttc cagatcgcta aactggtgag
     9421 acagggcgga ttgcgtctga tgcaacgtcg ccgcagcggc tgcgagtgag ccgcagttcc
     9481 gcaacgcttg tagcgttttc agatgtttta cttcgatcat gaaagtcctt cacttcggca
     9541 tgaataattt gcgcttgagg aatatacagt aaccgccaat tatggatgtg taaacatctg
     9601 gacggctaaa atccttcgtc ttttaaattt atggtgcgtt ggctgcgttt ctccaccccg
     9661 gtcacttact tcagtaagct cccggggatg aataaacttg ccgccttccc taaattcaaa
     9721 atccatagga tttacatata attagaggaa gaaaaatgac aatattgaat cacaccctcg
     9781 gtttccctcg cgttggcctg cgtcgcgagc tgaaaaaagc gcaagagagt tattgggcag
     9841 ggaactccac gcgtgaagaa ctgctggcgg tagggcgtga attgcgtgct cgtcactggg
     9901 atcaacaaaa gcaagcgggt atcgacctgc tgccggtggg cgattttgcc tggtacgatc
     9961 atgtactgac caccagtctg ctgctgggta acgttccggc gcgtcatcag aacaaagatg
    10021 gttcggtaga tattgacacc ctgttccgta ttggtcgtgg acgtgcgccg actggcgaac
    10081 ctgcggcggc agcggaaatg accaaatggt ttaacaccaa ctatcactac atggtgccgg
    10141 aattcgttaa aggccaacag ttcaaactga cctggacgca gctgctggag gaagtggacg
    10201 aggcgctggc gctgggccac aacgttaagc ctgtgctgct ggggccggtt acctggctgt
    10261 ggctggggaa agtgaaaggt gaacagtttg accgcctgag cctgctgaac gacattctgc
    10321 cggtttatca gcaagtgctg gcagaactgg agaaacgcgg catcgagtgg gtacagattg
    10381 atgaacccgc gctggtactg gaactaccac aggcgtggct ggacgcatac aaacccgctt
    10441 acgacgcgct ccagggacag gtgaaactgc tgctgactac ctattttgaa ggcgttacgc
    10501 caaatctcga cacgattact gcgctgcctg ttcagggact gcatgtggac cttgtacatg
    10561 gtaaagatgg cgttgctgaa ctgcacaagc gcctgccttc tgactggctg ctgtctgcgg
    10621 gactgatcaa tggtcgtaac gtctggcgcg ccgatcttac tgagaaatat gcgcaaatta
    10681 aggacattgt cggcaaacgt gatttgtggg tggcatcttc ctgctcgttg ctgcacagcc
    10741 ccatcgacct gagcgtggaa acgcgtcttg atgcagaagt gaaaagctgg tttgccttcg
    10801 ccttacaaaa atgccatgaa ctggcactgc tgcgcgatgc gctgaaaagt ggtgacacgg
    10861 cagctctggc agagtggagc gccccaattc aggcgcgtcg tcactctact cgtgtacata
    10921 atccggcggt agaaaagcgt ctggcggcga tcaccgccca ggacagccag cgtgcgaatg
    10981 tctatgaagt gcgtgctgaa gcccagcgtg cgcgttttaa actgccagcg tggccgacca
    11041 ccacgattgg ttccttcccg caaaccacgg aaattcgtac cctgcgtctg gatttcaaaa
    11101 agggcaatct cgacgccaac aactaccgca cgggcattgc ggaacatatc aagcaggcca
    11161 ttgttgagca ggaacgtttg ggactggatg tgctggtaca tggcgaggcc gagcgtaatg
    11221 acatggtgga atactttggc gagcacctcg acggatttgt ctttacgcaa aacggttggg
    11281 tacagagcta cggttcccgc tgcgtgaagc caccgattgt tattggtgac gttagtcgcc
    11341 cggcaccgat taccgtggag tgggcgaagt atgcgcaatc tctgactgat aaaccggtga
    11401 aagggatgct gactggcccg gtgaccattc tctgctggtc gttcccgcgt gaagatgtca
    11461 gccgtgaaac catcgccaaa caaattgcgc tggcgctgcg tgatgaagtg gcggacctgg
    11521 aagccgcagg aattggcatc atccagattg atgaaccggc gctgcgcgaa ggtttaccgc
    11581 tgcgtcgtag cgactgggat gcatatctcc agtggggcgt ggaggccttc cgtatcaacg
    11641 ccgccgtggc gaaagatgac acacaaatcc acactcacat gtgttattgc gagttcaacg
    11701 acatcatgga ttccattgcg gcactggatg cagacgtcat caccatcgaa acctcgcgtt
    11761 ccgacatgga gttgctggag tcgtttgaag agtttgatta tccgaatgaa atcggtccag
    11821 gcgtctatga cattcactcg ccaaacgtac cgagcgtaga atggattgaa gccttgctga
    11881 agaaagcggc aaaacgcatt ccggcagagc gcctgtgggt caacccggac tgtggcctga
    11941 aaacgcgcgg ctggccagaa acccgcgcgg cactggcgaa catggtgcag gcggcgcaga
    12001 atttgcgtcg gggatgatga atattaacga gtcactgtaa attgcagtac gatgaaagag
    12061 gcaaaactgc ctgataccag gcctacataa tttatgcaat ttattgaatt tttgagtttt
    12121 gttggccgga caaggcgttc acgccgcatc cggcatgaac aacgcgcact ttgccaataa
    12181 tctgatggct tccatcaccg gaagccattt tgctatctgc gcccgttcag atacagaaat
    12241 aaccgaatca tttttacgca aaatataatc ctgagcgatt tgttcagtaa tcaacgctac
    12301 gttatttatt ctcacttttc acgaaattgt atcccttttc agtaacgtgg tagtgaggca
    12361 tagacttatg tccgctatcc tcaataataa ccaaaccctc gttagctaat ttgttaacaa
    12421 tgttaacaac attaccgaat cctgaaattt gccttatgga tagtgtgcga tcgagattca
    12481 tccagttcca gtttatatct ttctcagcca taactttcag tacgttaatt tcagtttcag
    12541 ttatcatagt caagtgcatc ctggtggtat aagtcattaa gttctccctt aagtttataa
    12601 tcttctagag tagcagtatg cgtatgattc cagagtgcat agcctgcgtc accatcaggt
    12661 tgtcctgttt cccaaccaag attacagtaa cgctgatatt cccgacactc atgagtatag
    12721 aa
//
LOCUS       DADMHC010000117        12622 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.117, whole genome shotgun sequence.
ACCESSION   DADMHC010000117 DADMHC010000000
VERSION     DADMHC010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12622)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12622)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12622
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.117"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            210..557
                     /locus_tag="JNZ57_002672"
     CDS             210..557
                     /locus_tag="JNZ57_002672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidH family protein"
                     /protein_id="HAY8828850.1"
                     /translation="MKISRLGEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAP
                     DFATPVIRELLALLLCLFSGGLAMYGYLRWLRNEKAMRLKEDLPYTNSLLIISLILMV
                     VAVIVMGLVLYAG"
     gene            547..909
                     /locus_tag="JNZ57_002673"
     CDS             547..909
                     /locus_tag="JNZ57_002673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF202 domain-containing protein"
                     /protein_id="HAY8828851.1"
                     /translation="MPDSRKARRIADPGLQPERTSLAWFRTMLGYGALMALAIKHNWH
                     QAGMLFWISIGILAIVALILWHYTRNRNLMDVTNSDFSQFHVVRDKFLISLAVLSLAI
                     LFAVTHIHQLIVFIERVA"
     gene            906..1403
                     /locus_tag="JNZ57_002674"
     CDS             906..1403
                     /locus_tag="JNZ57_002674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HAY8828852.1"
                     /translation="MTGSQVIDAEEDRHKLVVEYKDALQPADFYHNFKQRGIRSVQLI
                     PYLEFDDRGDLTAASVTAELWGKFLIALFECWVRADISRISIELFDATLQKWCGGENP
                     QPRRDCQACDWHRLCPHARQETPDSVLCAGYQAFYSYSAPHMRVMRDLIKQHRSPMEL
                     MTMLR"
     gene            complement(1411..2595)
                     /gene="emrD"
                     /locus_tag="JNZ57_002675"
     CDS             complement(1411..2595)
                     /gene="emrD"
                     /locus_tag="JNZ57_002675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418129.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter EmrD"
                     /protein_id="HAY8828853.1"
                     /translation="MKRQRNVNLLLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGA
                     VQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAA
                     SAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWN
                     WRACYLFLLVLCVGVTFSMARWMPETRPVDAPRTRLLTSYKTLFGNSGFNCYLLMLIG
                     GLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ
                     SVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFLAGT
                     AGALVGGLQNIGSGMLASLSAMLPQTGQGSLGLLMTLMGWLIVLCWLPLATRMSHQGQ
                     PV"
     gene            complement(3014..3103)
                     /gene="tisB"
                     /locus_tag="JNZ57_002676"
     CDS             complement(3014..3103)
                     /gene="tisB"
                     /locus_tag="JNZ57_002676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin TisB"
                     /protein_id="HAY8828854.1"
                     /translation="MSLVDIAILILKLIVAALQLLDAVLKYLK"
     gene            3668..3766
                     /gene="ivbL"
                     /locus_tag="JNZ57_002677"
     CDS             3668..3766
                     /gene="ivbL"
                     /locus_tag="JNZ57_002677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ilvB operon leader peptide IvbL"
                     /protein_id="HAY8828855.1"
                     /translation="MTTSMFNAKLLPTALSAAVVVVRVVVVVGNAP"
     gene            3872..5560
                     /gene="ilvB"
                     /locus_tag="JNZ57_002678"
     CDS             3872..5560
                     /gene="ilvB"
                     /locus_tag="JNZ57_002678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HAY8828856.1"
                     /translation="MASSGTTSTRKRFTGAEFIVHFLEQQGIKIVTGIPGGSILPVYD
                     ALSQSTQIRHILARHEQGAGFIAQGMARTDGKPAVCMACSGPGATNLVTAIADARLDS
                     IPLICITGQVPASMIGTDAFQEVDTYGISIPITKHNYLVRHIEELPQVMSDAFRIAQS
                     GRPGPVWIDIPKDVQTAVFEIETQPAMAEKAAAPAFSEESIRDAAAMINAAKRPVLYL
                     GGGVINAPARVRELAEKAQLPTTMTLMALGMLPKAHPLSLGMLGMHGVRSTNYILQEA
                     DLLIVLGARFDDRAIGKTEQFCPNAKIIHVDIDRAELGKIKQPHVAIQADVDDVLAQL
                     IPQVEAQPRAEWHQLVADLQREFPCPIPKACDPLSHYGLINAVAACVDDNAIITTDVG
                     QHQMWTAQAYPLNRPRQWLTSGGLGTMGFGLPAAIGAALANPDRKVLCFSGDGSLMMN
                     IQEMATASENQLDVKIILMNNEALGLVHQQQSLFYEQGVFAATYPGKINFMQIAAGFG
                     LETCDLNNEADPQAALQEIINRPGPALIHVRIDAEEKVYPMVPPGAANTEMVGE"
     gene            5564..5854
                     /locus_tag="JNZ57_002679"
     CDS             5564..5854
                     /locus_tag="JNZ57_002679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase isozyme 1 small subunit"
                     /protein_id="HAY8828857.1"
                     /translation="MQNTTHNNVILELTVRNHPGVMTHVCGLFSRRAFNVEGILCLPI
                     QDSDKSHIWLLVNDDQRLEQMISQIDKLEDVVKVQRNQSDPTMFNKIAVFFQ"
     gene            5928..6518
                     /gene="uhpA"
                     /locus_tag="JNZ57_002680"
     CDS             5928..6518
                     /gene="uhpA"
                     /locus_tag="JNZ57_002680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator UhpA"
                     /protein_id="HAY8828858.1"
                     /translation="MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLP
                     GRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKR
                     CSPDELIAAVHTVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAA
                     ELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW"
     gene            6518..8020
                     /gene="uhpB"
                     /locus_tag="JNZ57_002681"
     CDS             6518..8020
                     /gene="uhpB"
                     /locus_tag="JNZ57_002681"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction histidine-protein
                     kinase/phosphatase UhpB"
                     /protein_id="HAY8828859.1"
                     /translation="MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFP
                     FGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISR
                     YRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWH
                     YLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALP
                     IIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRL
                     RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA
                     ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG
                     IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE
                     DDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRYV"
     gene            8030..9349
                     /gene="uhpC"
                     /locus_tag="JNZ57_002682"
     CDS             8030..9349
                     /gene="uhpC"
                     /locus_tag="JNZ57_002682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418123.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter family glucose-6-phosphate
                     receptor UhpC"
                     /protein_id="HAY8828860.1"
                     /translation="MLPFLKAPADAPLMTDKYEIDARYRYWRRHILLTIWLGYALFYF
                     TRKSFNAAVPEILANGVLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGL
                     IATGIINILFGFSTSLLAFAVLWVLNAFFQGWGSPVCARLLTAWYSRTERGGWWALWN
                     TAHNVGGALIPIVMAAVALHYGWRAGMMIAGCMAIVVGIFLCWRLRDRPQALGLPAVG
                     EWRHDALEIAQQQEGAGQTRKEILTKYVLLNPYIWLLSFCYVLVYVVRAAINDWGNLY
                     MSETLGVDLVTANTAVTMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVG
                     SLWLMPFASYVMQATCFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLG
                     ASLAGWPLAKVLDTWHWSGFFVVISIAAGISALLLLPFLNAQTPREA"
     gene            9487..10878
                     /gene="uhpT"
                     /locus_tag="JNZ57_002683"
     CDS             9487..10878
                     /gene="uhpT"
                     /locus_tag="JNZ57_002683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexose-6-phosphate:phosphate antiporter"
                     /protein_id="HAY8828861.1"
                     /translation="MLAFLNQVRKPTLDLPLEVRRKMWFKPFMQSYLVVFIGYLTMYL
                     IRKNFNIAQNDMISTYGLSMTQLGMIGLGFSITYGVGKTLVSYYADGKNTKQFLPFML
                     ILSAICMLGFSASMGSGSVSLFLMIAFYSLSGFFQSTGGSCSYSTITKWTPRRKRGTF
                     LGFWNISHNLGGAGAAGVALFGANYLFDGHVIGMFIFPSIIALIVGFIGLRYGSDSPE
                     SYGLGKAEELFGEEISEEDKETESTDMTKWQIFVEYVLKNKVIWLLCFANIFLYVVRI
                     GIDQWSTVYAFQELKLSKAVAIQGFTLFEAGALVGTLLWGWLSDLANGRRGLVACIAL
                     ALIIATLGVYQHASNEYIYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGAADGIKG
                     TFAYLIGDSFAKLGLGMIADGTPVFGLTGWAGTFAALDIAAIGCICLMAIVAVMEERK
                     IRREKKIQQLTVA"
     gene            complement(10923..>12622)
                     /gene="adeD"
                     /locus_tag="JNZ57_002684"
     CDS             complement(10923..>12622)
                     /gene="adeD"
                     /locus_tag="JNZ57_002684"
                     /EC_number="3.5.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adenine deaminase"
                     /protein_id="HAY8828862.1"
                     /translation="SRGDAVADYIIDNVSILDLINGGEISGPIVIKGRYIAGVGAEYA
                     DAPALQRIDARGATAVPGFIDAHLHIESSMMTPVTFETATLPRGLTTVICDPHEIVNV
                     MGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQVTGL
                     AEMMDYPGVISGQNALLDKLDAFRHLTLDGHCPGLGGKELNAYITAGIENCHESYQLE
                     EGRRKLQLGMSLMIREGSAARNLNALAPLINEFNSPQCMLCTDDRNPWEIAHEGHIDA
                     LIRRLIEQHNVPLHVAYRVASWSTARHFGLNHLGLLAPGKQADIVLLSDARKVTVQQV
                     LVKGEPIDAQTLQAEESARLAQSAPPYGNTIARQPVSASDFALQFTPGKRYRVIDVIH
                     NELITHSHSSVYSENGFDRDDVCFIAVLERYGQRLAPACGLLGGFGLNEGALAATVSH
                     DSHNIVVIGRSAEEMALAVYQVIQDGGGLCVVRNGQVQSHLPLPIAGLMSTDTAQSLA
                     EQIDALKAAARECGPLPDEPFIQMAFLSLPVIPALKLTSQGLFDGEKFAFTTLEVTE"
BASE COUNT         2790 a         3326 c         3537 g         2969 t
ORIGIN      
        1 aagcaggaac ccaccgaaat gattcaggcg acagcctgaa cgtagcaggg atcctcgtcc
       61 ttcagggcgt ggaggatgtc aatttgcgct atgataccca tctgacctcc ttgtagcgga
      121 tggcaaaagc atatcaggaa acgggcggac gaaattctta aaaaaaaccg ctaaagatag
      181 agcgttagtg aaattgcaaa ggagcaacaa tgaaaatttc ccgccttgga gaagcgcccg
      241 attaccgctt ctcgctggct aatgagcgta cttttctggc gtggatccgt accgcactag
      301 gatttctggc ggcgggggtt gggcttgatc aacttgcgcc agatttcgcc acgcccgtca
      361 ttcgtgaact gctggcgttg ttgttgtgtc tgttttccgg cgggttagca atgtatggct
      421 acctgcgctg gttacgcaat gaaaaagcga tgcgtctgaa agaggacctg ccctacacca
      481 acagcttatt aatcattagc ttaatattga tggtcgtggc ggtgatcgtt atgggactgg
      541 tgttgtatgc cggatagccg caaagccaga cgcattgccg acccaggact gcagccggag
      601 cgcacatcac tggcgtggtt tcgtaccatg ctgggctacg gcgcgttgat ggcgttggct
      661 atcaaacaca actggcacca ggcgggcatg ttattctgga tttcgattgg cattctcgcc
      721 atcgtggcgc tgatcctctg gcactacacc cgtaatcgca atttaatgga tgtcacgaat
      781 agcgattttt cccaatttca cgtagtccgt gacaaatttt tgatctccct cgcggtgtta
      841 tctctcgcaa tactgtttgc tgtaacgcat atacatcaac ttatcgtatt tattgagaga
      901 gtcgcatgac aggaagtcag gtcattgatg ctgaagagga caggcataaa ctggttgtag
      961 agtacaagga tgctctgcaa cctgccgatt tttatcacaa tttcaaacag cggggcatcc
     1021 gctccgtaca gctcattccc tatcttgaat ttgatgaccg gggcgatctg acggccgctt
     1081 cggtgacagc agagctgtgg gggaaatttt taattgccct gttcgagtgt tgggtgcggg
     1141 cagatatcag tcgtatctcg attgagcttt ttgacgccac cttacaaaaa tggtgtggcg
     1201 gcgaaaaccc gcaaccgcgc cgtgactgcc aggcgtgcga ctggcatcgc ctgtgcccgc
     1261 acgctcggca ggagacgcca gacagcgtgc tttgtgcggg ctatcaggcg ttttattctt
     1321 actccgcacc gcatatgcgg gtgatgcgtg atctgataaa gcagcatcgt tctcccatgg
     1381 agctgatgac gatgctgcgg tgacgtgcgc ttaaacgggc tgcccctgat gcgacatccg
     1441 cgtcgccagc ggcagccagc acagcacgat caaccatccc attaaggtca tcaataaccc
     1501 caggctaccc tgaccggttt gcggcaacat cgcagagagc gacgccagca tgccggaacc
     1561 aatgttttgc agaccgccga ccagcgcgcc agccgtgccc gccaggaagg ggaacggctc
     1621 catcgcgccg ctggtcgcca gcggaaacag catcccggca ccgaaaaaga acagcgcggc
     1681 gggaacgagc agcgtccaga cattcatcac gccaaaccag tcggggatcc acatcagcaa
     1741 gccagccagc aggcagcaga taaccgactg ccacattaac gtggagaagc gtttattggg
     1801 acgtccggca aaccatgcgc caaaaaacgc tgccggaatc ggcagaataa acaaaatact
     1861 gaccgtcata ctgctcagcc ctaacaccgc gcccatcagc acgccggagc aggcttcaaa
     1921 ggcggcaatc ccggccagac cgccaatcag catcagcaaa taacagttaa aaccgctgtt
     1981 accgaaaagc gttttataac tggtaagcag gcgcgtgcgc ggtgcatcga ccggacgcgt
     2041 ttccggcatc cagcgggcca tactgaaggt cacaccaaca caaagaacca acaaaaagag
     2101 ataacaggcg cgccagttcc acatcgtatc cagcagaccg ccgattagcg gtgcgagcaa
     2161 cggactgacg agaatcccca tgtttaacag gctgttagca tggcgcaact gtgtccgttc
     2221 atataaatct cgcggcaaag tacgcgccat tacgccgcca acgccggtgc ccatcccctg
     2281 catcgcgctg gcggcaatca ataccgtcaa actggaggtc gtgaccgcga ccagcgttgc
     2341 cagcataaaa atggacattc cgacgaggat caccggtcgg cgacccacac ggtcggaaat
     2401 cgggccataa aacagctgtg agacaccgta agtcagcaga taagcgccca ttacgctctg
     2461 caccgcccct tcacggacgt tgagatcgcg cgccatatcg gcaatagctg gaatataaat
     2521 ggtttgcgcc atctgaccga cggccacgag taataccaac atcaataaca aattgacgtt
     2581 tctttgcctt ttcattatca cggatgcttt tataaaaata attagaataa gtcactacgc
     2641 attcccataa atgcgggaga ggaatctatc acattgatga atgttagcca gatatacgcc
     2701 aggaatgggg aattgtttag cggcagaata tgtaaacaaa agcggcaata aatgttgccg
     2761 ggagggatta cgtgcgaact gtaaccctct ccccaaaggg gcgaggggga aaccaccgtt
     2821 ccctttcaga aaatgagcta aacattgcac gggacggtcc cctcgcccct ttggggagag
     2881 ggctagggtg aggggcacag gcagcgcagg tgcaaacatt ctgctggtag aagaagcccc
     2941 caactccaac ccgcacgcta aatataaaag gggagcggtt acccgctccc ctttggtgcg
     3001 acttgaatct gaattacttc aggtatttca gaacagcatc aagcagttgc agtgctgcaa
     3061 caatgagttt gaggataaga atggcgatat ccaccaggct catacgcgtc tcctgtggtt
     3121 caggagcact gccagctgac gtacctttcc gctgcctgtt gccagctgtt gtgcacgcgg
     3181 tatctcaagg agaaacgttg tgcttgttga cataacacag tgtgctcacg cggggttaag
     3241 gcgctgacgg caccacccgt ttcagccagg acttagtgcg ccgggtaacg atgcggcccc
     3301 cgtataatac attgcgtaca gtgatattat agaagtttac tgtataaata aacagtaata
     3361 tttggacaaa acgcaaactg tgatcgatac tcaactatgc cctaaatacg tcaaaattcg
     3421 tgccgaaatt gcgcgttctg tgcggaacac gtatactttc agtgttgaca taatacagtg
     3481 tgctttgcgg ttaccagctg caggcggctg atgaaacctc gctccggcgg ggttttttgt
     3541 tacctgcaat tcagtacaaa acgtgatcag cccctcaatt ttcccttgct gaaaaatttt
     3601 ccattgtctc ccctgtaaag ctgtgcttgt ataaatattg ttaaacacaa aaccaacaag
     3661 gtccccaatg actacttcca tgttcaacgc aaaactacta ccaactgcgc tatccgccgc
     3721 agtggtcgtc gtgcgtgtgg tggtggtcgt cggcaatgcg ccgtagggac tggaacaaca
     3781 cacgattcca aaaccccgcc ggcgcaaacc gggcggggtt tttcgtttaa gcacctcccg
     3841 gaaagtcggc ccagaagaaa aggactggag catggcaagt tcgggcacaa catcgacgcg
     3901 taagcgcttt accggcgcag aatttatcgt tcatttcctg gaacagcagg gcattaagat
     3961 tgtgacgggc attccaggcg gttctatcct gcctgtttac gatgccttaa gccaaagcac
     4021 gcaaatccgc catattctgg cccgtcatga acagggcgcg ggatttatcg ctcaggggat
     4081 ggcgcgcacc gacggtaaac cggcggtctg tatggcctgt agcggaccgg gtgcgactaa
     4141 cctggtgacc gccattgccg atgcgcggct ggactccatc ccgctgattt gcatcaccgg
     4201 tcaggttccc gcctcgatga tcggcaccga cgccttccag gaagtggaca cctacggcat
     4261 ctctatcccc atcaccaaac acaactatct ggtcagacat atcgaagaac tcccgcaggt
     4321 catgagcgat gccttccgca ttgcgcaatc aggccgccca ggcccggtgt ggatagacat
     4381 tcctaaggat gtgcaaacgg cagtttttga gattgaaaca cagcccgcta tggcagaaaa
     4441 agccgccgcc cccgccttta gcgaagaaag cattcgtgac gcagcggcga tgattaacgc
     4501 tgccaaacgc ccggtgcttt atctgggcgg cggtgtgatc aatgcgcccg cacgggtgcg
     4561 tgaactggcg gagaaagcgc aactgcctac caccatgact ttaatggcgc tgggcatgtt
     4621 gccaaaagcg catccgttgt cgctgggtat gctggggatg cacggtgtgc gcagcaccaa
     4681 ctatattttg caggaggcgg atttgttgat agtgctcggt gcgcgttttg atgaccgggc
     4741 gattggcaaa accgagcagt tctgtccgaa tgccaaaatt attcatgtcg atatcgatcg
     4801 cgcagagctg ggtaaaatca agcagccgca tgtggcgatt caggcggatg ttgatgacgt
     4861 gctggcgcaa ttgatcccgc aggtggaagc gcaaccgcgt gcagagtggc accagttggt
     4921 agcggatttg cagcgcgaat tcccgtgtcc aatcccgaaa gcgtgcgatc cattaagcca
     4981 ttacggcctg atcaacgccg ttgccgcctg tgtcgatgac aatgcgatta tcaccaccga
     5041 tgtgggtcag catcagatgt ggaccgcgca agcttatccg ctcaatcgcc cacgccagtg
     5101 gctgacctcc ggtgggctgg gcacgatggg ttttggcctg cctgcggcga ttggcgcggc
     5161 gctggcgaac ccggatcgca aagtgttgtg tttctccggc gacggcagcc tgatgatgaa
     5221 tattcaggag atggcgaccg ccagtgaaaa tcagctggat gtcaaaatca ttctgatgaa
     5281 caacgaagcg ctggggctgg tgcatcagca acagagtctg ttctacgagc aaggcgtttt
     5341 tgccgccacc tatccgggca aaatcaactt tatgcagatt gccgccggat tcggcctcga
     5401 aacctgtgat ttgaataacg aagccgatcc gcaggctgca ttgcaggaaa tcatcaatcg
     5461 ccctggcccg gcgctgatcc atgtgcgcat tgatgccgaa gaaaaagttt acccgatggt
     5521 gccgccaggt gcggcgaata ctgaaatggt gggggaataa gccatgcaaa acacaactca
     5581 taacaacgta attctggagc tcaccgttcg caaccatccg ggcgtaatga cgcacgtttg
     5641 tggccttttt tcccgccgcg cttttaacgt tgaaggcatt ctttgtctgc cgattcagga
     5701 cagcgacaaa agccatatct ggctactggt caatgacgac cagcgtctgg agcagatgat
     5761 aagccaaatc gataagctgg aagatgtcgt gaaagtgcag cgtaatcagt ccgatccgac
     5821 gatgtttaac aagatcgcgg tgttttttca gtaaccgctc aaggcttgaa caacatcgcg
     5881 cttatcgtta aggtaagcgc gtttttttta cccgccagga caagaccatg atcaccgttg
     5941 cccttataga cgatcacctc atcgtccgct ccggctttgc gcagctgctg gggctggaac
     6001 ctgatttgca ggtagttgcc gagtttggtt cggggcgcga ggcgctggcg gggctgccgg
     6061 ggcgcggtgt gcaggtgtgt atttgcgata tctccatgcc cgatatctcc ggtctggagc
     6121 tgctaagcca gctgccgaaa ggtatggcga cgattatgct ctccgttcac gacagtcctg
     6181 cgctggttga gcaggcgctt aacgcggggg cacgcggctt tctttccaaa cgctgtagcc
     6241 cggatgaact cattgctgcg gtgcatacgg ttgccacggg cggctgttat ctgacgccgg
     6301 atattgccat taaactggca tccggtcgtc aggacccgct aaccaaacgt gaacgccagg
     6361 tggcggaaaa actggcgcaa ggaatggcgg tgaaagagat tgccgccgaa ctgggcttgt
     6421 caccgaaaac ggtacacgtc catcgcgcca atctgatgga aaaactgggc gtcagtaacg
     6481 acgtagagct ggcgcgccgc atgtttgatg gctggtgatg aagacgttgt tctcccgctt
     6541 aattaccgtt attgcctgct tttttatctt ctctgccgca tggttttgcc tgtggagtat
     6601 cagcctgcat ctggttgagc gccctgatat ggcggtgctg ttatttccgt ttggtctgcg
     6661 tctggggcta atgctgcaat gcccgcgcgg atactggccg gtgctgctgg gcgcggagtg
     6721 gctgctgatt tactggctaa cgcaggcggt cggtttaacc cattttccgt tattgatgat
     6781 cggtagttta ctgacgttac tgcccgtagc gctgatctcg cgctatcgcc atcagcgtga
     6841 ctggcgcacc ttgctgttac agggggcggc gttaacggcg gcggcgttgt tgcagtcgct
     6901 gccctggctt tggcacggca aagagtcgtg gaatgcgctg ttgctgactt taactggcgg
     6961 cctgacgctg gccccgatat gtctggtgtt ctggcactat ctcgccaata acacctggct
     7021 gccgctcggc ccgtcactgg tttctcagcc aatcaactgg cgcgggcgac atctggtctg
     7081 gtacttgctg ctgtttgtta tcagtctctg gctccagttg ggattgccgg acgaactgtc
     7141 gcgctttacg ccattctgtc tggcgctgcc gattatcgcg ctggcctggc actatggttg
     7201 gcaaggggcg ctgattgcga cgttgatgaa cgccatcgcg ctgatcgcca gtcaaacctg
     7261 gcgcgatcat ccggtggatt tattgctctc gctgctggtg caaagtctga cagggttgtt
     7321 gcttggcgct ggcatccagc ggttgcgtga acttaaccag tcgctgcaaa aggaactggc
     7381 gcgcaatcag catctggctg aacggttgct ggaaaccgaa gagagcgtgc gccgtgatgt
     7441 ggcgcgtgag ctgcatgatg atatcggtca gaccatcact gctattcgta ctcaggcggg
     7501 cattgttcag cggctggcgg cagataacgc cagcgtgaag cagagcgggc agctcatcga
     7561 acaactatcg ctgggcgttt acgacgcggt gcgccgtttg ttgggtcggt tacgtccgcg
     7621 ccagttggat gatctcaccc tggagcaggc catccgctca ctgatgcggg aaatggagct
     7681 ggaagggcgc ggtattgtca gccatctcga atggcgaatc gatgaatcag cgttaagcga
     7741 aaaccagcgc gtgacgctgt ttcgtgtctg ccaggaaggg ctgaacaaca ttgtgaaaca
     7801 tgctgatgcc agcgcggtca ccctgcaagg ctggcagcag gatgaacggt tgatgctggt
     7861 tattgaagac gatggcagcg gtttgccgcc gggttccggg caacaaggtt ttggcctcac
     7921 cggaatgcgc gagcgcgtaa cggcgctggg tggcacatta cacatttcct gtctgcacgg
     7981 cacgcgtgtc agcgtttctc tacctcaacg ctatgtctaa ggtttgatga tgttgccgtt
     8041 tctgaaagcg cctgccgatg cgccattaat gactgataaa tatgaaattg atgcccgcta
     8101 tcgctactgg cgtcggcata ttctgctgac catctggctg ggttacgcgc tgttttactt
     8161 cacgcggaaa agttttaacg ccgccgtacc agaaatcctt gctaacggcg tgctcagccg
     8221 tagcgatatc ggcctgttag cgaccctgtt ttacattacc tatggcgtgt cgaagtttgt
     8281 ctccggcatt gtcagcgatc gctcaaatgc ccgttatttt atggggatag ggcttatcgc
     8341 cacgggcatt atcaacattc tgtttggctt ctcgacgtcg ctattggcgt ttgccgtact
     8401 ctgggtgctg aacgcctttt tccagggctg gggttcaccg gtgtgtgcgc gtctgttaac
     8461 ggcctggtat tcacgtaccg agcgcggtgg ttggtgggca ttatggaaca cggcgcataa
     8521 cgtcggcggc gcactcattc ccattgtgat ggcagcggtt gcactacatt acggctggcg
     8581 tgccgggatg atgattgctg gttgtatggc gatcgtcgtg ggaatttttc tctgctggcg
     8641 gctgcgcgat cgcccgcagg cgttaggttt accggcggtc ggtgaatggc gacacgacgc
     8701 gctggagata gctcaacaac aagaaggggc agggcagacg cgtaaagaga tcctcaccaa
     8761 atatgtgttg ctgaatccgt atatctggct gctttcgttt tgctatgtgc tggtctatgt
     8821 ggtccgggcg gcgatcaacg actggggcaa tttgtatatg tccgagacgc tgggcgtcga
     8881 tctggtcacg gcgaatacgg cagtgacgat gtttgaactg ggtggattta tcggtgcgct
     8941 ggtagcgggt tggggctcgg acaaattgtt taacggcaac cgagggccga tgaatttgat
     9001 tttcgccgcc ggaattttgc tttcagtcgg ctccctgtgg ctgatgccat ttgccagcta
     9061 cgtgatgcag gcaacctgct tcttcaccat tggttttttt gtctttggcc cacagatgtt
     9121 aatcggtatg gcggcggcag agtgttccca caaagaggcg gcaggggcgg cgacggggtt
     9181 tgtcggcttg tttgcttatc tgggggcgtc gcttgctggt tggccgctgg cgaaagtact
     9241 cgatacctgg cactggagcg gattttttgt ggttatctct atcgccgccg ggatttccgc
     9301 actgctgtta ctgccctttt tgaacgccca gacaccgcgc gaagcgtgat gcatctcacc
     9361 ttttcacttc atatccggca aaactaagaa attttccagg ttttgcctgg acgctatctc
     9421 aggcctgatt tgctgctgat ttttacaatg catgcctcac gcaggtattc atttcaggag
     9481 taacccatgc tggctttcct aaaccaggtt cgcaagccga ccctggacct tccgctcgaa
     9541 gtgcggcgca aaatgtggtt caaaccgttc atgcaatcct acctggtggt ctttatcggc
     9601 tacctgacga tgtacctgat tcgcaagaac tttaacatcg cgcagaacga tatgatttcg
     9661 acctacgggt tgagcatgac gcagctgggg atgatcggcc tgggtttctc catcacttat
     9721 ggcgtgggta aaacgttggt ttcatactac gccgacggca aaaacaccaa acaattcctg
     9781 ccgttcatgc tgatcctgtc tgccatttgt atgctgggct tcagtgccag tatgggcagc
     9841 ggctcggtta gcctgttcct gatgattgcc ttctactcct taagcggctt tttccagagt
     9901 accggcggtt cgtgcagtta ctccaccatc accaaatgga cgccgcgtcg taaacgcggg
     9961 acattcctcg gtttctggaa tatttctcac aaccttggcg gtgcaggcgc agcaggtgtg
    10021 gcgctgttcg gggcaaatta cctgttcgat ggccatgtca tcggcatgtt tatcttcccg
    10081 tcgattatcg cgctgattgt cggttttatc ggcctgcgtt acggcagcga ctccccagaa
    10141 tcttatggcc tcggcaaagc tgaagaactg ttcggcgagg agatcagcga agaggacaaa
    10201 gagacagaat ctaccgatat gaccaagtgg cagatctttg ttgagtatgt gctgaaaaac
    10261 aaagtgatct ggctgctgtg cttcgccaac attttcctct atgtggtacg tattggtatc
    10321 gaccagtggt caaccgtata cgcgttccag gaactgaaac tctctaaagc ggtggcgatt
    10381 cagggcttta cgctgtttga agctggtgcg ctggtcggta cgctgctgtg gggctggctc
    10441 tctgacctgg cgaacggtcg ccgtggcctg gtggcctgca tcgcgctggc gctgattatc
    10501 gccacgctcg gtgtgtatca acatgccagc aacgaatata tctatctggc ttctctcttt
    10561 gcgttgggtt tcctggtctt tggcccgcaa ttgttgattg gtgtggctgc tgttggcttt
    10621 gtacctaaaa aagcgattgg cgctgccgat ggtattaaag gcacctttgc ttacctgatt
    10681 ggtgacagct ttgccaagtt aggtctggga atgattgccg atgggacgcc ggtattcggc
    10741 cttaccggct gggcaggcac cttcgccgca cttgatatcg ccgcgattgg ttgtatctgc
    10801 ctgatggcga tagtggcggt gatggaagaa cgcaaaatcc gccgcgagaa aaaaattcag
    10861 cagttgacag tggcataaac gtaactggtg acttttgccc ggcatgacgc cgggcttttt
    10921 tattattccg tgacttccag cgtagtgaag gcaaacttct cgccatcaaa tagcccctga
    10981 ctggttagtt ttagcgcggg gatcactggc agagaaagaa acgccatctg aataaacggc
    11041 tcatcgggta acggaccgca ttcacgggcg gcggctttca aggcgtcaat ttgttccgcc
    11101 agcgactgcg ccgtgtcggt gctcatcagg ccggcaatgg gcaacggcag atgactttgg
    11161 acctggccgt tacgtaccac gcacagcccg ccgccatcct gaatcacctg atagaccgcc
    11221 agcgccatct cttcggcact gcgaccgatc accacaatat tatggctgtc atggctgacc
    11281 gtcgcagcca gcgcaccttc attcagtcca aagccgccaa gcaaaccaca agccggagcc
    11341 agccgttgcc cgtaacgctc aagtacggca ataaagcaca catcatcgcg atcaaaacca
    11401 ttttcgctgt agacgctgga gtgggagtgc gtaatcaatt cgttatggat gacgtcaatg
    11461 acccgatagc gttttccggg cgtaaattgc agggcaaagt cgctggcgga aactggctgg
    11521 cgggcaatgg tgttgccata tggcggagcg gattgtgcca gtctcgccga ctcttccgcc
    11581 tgtaaggttt gcgcatcaat cggctcgcct ttcaccagta cctgctgcac cgtgacctta
    11641 cgcgcatcgc tcaacaggac gatatcggcc tgcttgccgg gtgccagtaa gccgaggtga
    11701 ttcagaccaa agtggcgcgc cgtcgaccag ctggcgacgc gatatgccac atgcagcggc
    11761 acattgtgtt gttcgatcag gcggcgaatt aaggcatcga tgtgtccttc atgggcgatc
    11821 tcccacgggt tacggtcatc ggtacagagc atgcattgcg ggctgttaaa ttcgttgatc
    11881 aacggtgcca gcgcgttgag attgcgggca gcggaccctt cgcggatcat caacgacatg
    11941 ccgagttgta atttccggcg tccttcttcc agctgataac tttcgtggca gttttcaata
    12001 cccgcagtaa tataggcgtt aagttcttta ccacccaaac ccgggcagtg accgtccagc
    12061 gtcaggtggc gaaatgcatc cagtttatcg agcagcgcat tctgcccgct aattacgcca
    12121 gggtagtcca tcatttctgc aaggccggta acctgcggat ggtcccgcca ggcgagcatc
    12181 tgttcaaggg taaaactggc accgttaaca tcgcagcctt ccagggcggg tacgcaagag
    12241 ctgacctgta agtactggtt ttgccttgcc tgttcggcac agcgggcaaa ccaggcgaat
    12301 ccggcttctc ccatcacgtt gacgatttca tgagggtcgc aaataacggt cgtcaggccg
    12361 cgcggcaggg tagcggtttc aaaggtgacc ggcgtcatca tgctggattc aatatgcagg
    12421 tgagcatcaa taaaccctgg caccgccgtt gcgccgcgag catcaatccg ctgcaaagcc
    12481 ggagcatcag cgtattctgc gccaacaccg gcaatgtaac gtcctttaat cacaattggg
    12541 ccggaaattt ctccgccatt gatcaggtcg agaatagaga cattatcaat aatataatcg
    12601 gcaacagcgt cgccacggga aa
//
LOCUS       DADMHC010000118        12543 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.118, whole genome shotgun sequence.
ACCESSION   DADMHC010000118 DADMHC010000000
VERSION     DADMHC010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12543)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12543)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12543
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.118"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(234..1574)
                     /gene="fadL"
                     /locus_tag="JNZ57_002685"
     CDS             complement(234..1574)
                     /gene="fadL"
                     /locus_tag="JNZ57_002685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708225.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid transporter FadL"
                     /protein_id="HAY8828863.1"
                     /translation="MSQKTLFTKSALAVAVALISTQAWSAGFQLNEFSSSGLGRAYSG
                     EGAIADDAGNVSRNPALITMFDRPTFSAGAVYIDPDVNISGTSPSGRSLKADNIAPTA
                     WVPNMHFVAPINDQFGWGASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGAYR
                     LNNAWSFGLGFNAVYARAKIERFAGDLGQLVAGQIMQSPAGQTPQGQALAATANGIDS
                     NTKIAHLNGNQWGFGWNAGILYELDKNNRYALTYRSEVKIDFKGNYSSDLNRAFNNYG
                     LPIPTATGGATQSGYLTLNLPEMWEVSGYNRVDPQWAIHYSLAYTSWSQFQQLKATST
                     SGNTLFQKHEGFKDAYRIALGTTYYYDDNWTFRTGIAFDDSPVPAQNRSISIPDQDRF
                     WLSAGTTYAFNKDASVDVGVSYMHGQSVKINEGPYQFESEGKAWLFGTNFNYAF"
     gene            1946..2230
                     /locus_tag="JNZ57_002686"
     CDS             1946..2230
                     /locus_tag="JNZ57_002686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF406 family protein"
                     /protein_id="HAY8828864.1"
                     /translation="MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTL
                     AALTEKARSVESEPCKISPTFTEESDGVRLDIDFTFACEAEMLIFQLGLR"
     gene            2410..3720
                     /gene="fadI"
                     /locus_tag="JNZ57_002687"
     CDS             2410..3720
                     /gene="fadI"
                     /locus_tag="JNZ57_002687"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase FadI"
                     /protein_id="HAY8828865.1"
                     /translation="MGQVLPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMV
                     VGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATS
                     FQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLF
                     SRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWS
                     DGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLT
                     DGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLFGPAWSTPLALERAGLTM
                     SDLTLIDMHEAFAAQTLANIQLLGSERFAREVLGRAHATGEVDDSKFNVLGGSIAYGH
                     PFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLEAE"
     gene            3720..5864
                     /gene="fadJ"
                     /locus_tag="JNZ57_002688"
     CDS             3720..5864
                     /gene="fadJ"
                     /locus_tag="JNZ57_002688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid oxidation complex subunit alpha FadJ"
                     /protein_id="HAY8828866.1"
                     /translation="MEMASAFTLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIK
                     QLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI
                     PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIG
                     VSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKDRPSSRPLPVRERI
                     LAGPLGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGEL
                     AMTPQSQALRSIFFASTDVKKDPGSDAPPAPLNSVGILGGGLMGGGIAYVTACKAGLP
                     VRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLI
                     IEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP
                     VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIR
                     MLTKGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVV
                     SSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLSAPQVAERCVM
                     LMLNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLA
                     TQYGSRFTPCERLVEMGARGESFWKTTATDLQ"
     gene            6067..6552
                     /gene="sixA"
                     /locus_tag="JNZ57_002689"
     CDS             6067..6552
                     /gene="sixA"
                     /locus_tag="JNZ57_002689"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohistidine phosphatase SixA"
                     /protein_id="HAY8828867.1"
                     /translation="MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVE
                     IERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVAS
                     VLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLKMAKA
                     I"
     gene            7227..7487
                     /locus_tag="JNZ57_002690"
     CDS             7227..7487
                     /locus_tag="JNZ57_002690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HAY8828868.1"
                     /translation="MSKFVKTAIAAAMVMGVFTSTATIAAGNNGTARFYGTIEDSVCS
                     IVPDDHKLEVDMGDIGAEKLKNNGTTTPKSFQIRLQDCVFDT"
     gene            7494..7790
                     /locus_tag="JNZ57_002691"
     CDS             7494..7790
                     /locus_tag="JNZ57_002691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8828869.1"
                     /translation="MTTTFTGTVSSANSGNYYTIFNTDTGAAFNNVSLAIGDSLGTSY
                     KSGMGIDQKIVKDTSTNKGKAKQTLNFKAWLVGAADAPDLGNFEANTTFQITYL"
     gene            7872..10514
                     /gene="yfcU"
                     /locus_tag="JNZ57_002692"
     CDS             7872..10514
                     /gene="yfcU"
                     /locus_tag="JNZ57_002692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial usher protein YfcU"
                     /protein_id="HAY8828870.1"
                     /translation="MPDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKG
                     DTKIDLKRFSSQGYVEPGKYNLQVQLNKQPLAEEYDIYWYAGEDDASKSYACLTPELV
                     AQFGLKEDVAKNLQWSHDAKCLKSGQLEGMEIKADLSQSALVISLPQAYLEYTYPDWD
                     PPSRWDDGISGIVADYSINAQTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNY
                     QHTRSNDDDEFSGDETQKKWEWSRYYAWRALPSLKAKLALGEDYLRSDIFDGFNYVGG
                     SVSTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQVPAGPFRIQDLGDSV
                     SGTLHIRIEEQNGQVQEYDISTASMPYLTRPGQIRYKIMMGRPQEWGHHVEGEFFSGA
                     EASWGIANGWSLYGGALGDENYQSAALGVGRDLSTFGAVAFDVTHSHTKLDKDTAYGK
                     GSLDGNSFRVSYSKDFDQLNSRVTFAGYRFSEENFMTMSEYLDASDSGMVRTGNDKEM
                     YTATYNQNFRDAGVSVYLNYTRHTYWDREEQINYNIMLSHYFNMGSIRNVSISMTGYR
                     YEYDNQADKGMYISLSMPWGDNSTVSYNGNYGSGTDSSQVGYFSRVDDATHYQLNVGT
                     SDKHTSVDGYYSHDGSLAQVDLSANYHEGQYTSAGLSLQGGATLTAHGGALHRTQNMG
                     GTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVNNYYRNQAYIDLNRLPENAEAT
                     QSVVQATLTEGAIGYRKFAVISGQKAMAVLRLSDGSHPPFGAEVKNDNEQTVGLVDDD
                     GNVYLAGVKPGEHMSVFWSGVAHCDINLPDPLPADLFNGLLLPCQHKGNVAPITSPAV
                     KPAIQEQTQRVTPTEPPTSISVNQ"
     gene            10534..11286
                     /locus_tag="JNZ57_002693"
     CDS             10534..11286
                     /locus_tag="JNZ57_002693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000482750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
                     /protein_id="HAY8828871.1"
                     /translation="MFNLTNTAKIVVPALALLATAVSFSSHASVTPDRTRLVFNESDK
                     SISVTLRNNDPTLPYLAQSWIEDAKGNKISSPLAVLPPVQRIDAMMNGQVKVQGLPDI
                     NKLPADRESVFYFNVREIPLKSNKPNTLQIALQTRIKLFWRPKALENTSMKSPWQHKV
                     TLIRNGQDFTVNNPTPYYVIISNASAKKGGNPPAGFTPLMMEPKTSAPLNAKMDSVPV
                     LTYINDYGARMPLYFKCTGNSCQVDEEQSRKG"
     gene            11302..11811
                     /locus_tag="JNZ57_002694"
     CDS             11302..11811
                     /locus_tag="JNZ57_002694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001733155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8828872.1"
                     /translation="MSHKFVAGAGLLVLAGWGISGLAVAGSDIKQVDLTLRILVDGPP
                     PCSVKGSAVKFGNVIINRIDGTNYQQDAKYTLNCGNKVSDDLRMQLKGNTAVINGETV
                     LSTDIAGLGVRIENAADNSLFAVGENNWTPFNVNTQPQLKAVPVKQSGVQLTPSEFNA
                     TMTMVVDYQ"
     gene            11808..12296
                     /locus_tag="JNZ57_002695"
     CDS             11808..12296
                     /locus_tag="JNZ57_002695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001709066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8828873.1"
                     /translation="MKKFLLLLLCAGCGAVLAAEDDITFHGTLMSPPACSISGGQTIE
                     VQFRDLIIDSIDGNYGRQKVDYELSCDSDVRDPEWNMTLSWTGTATSYNDSAIETDVP
                     GFGIELQHDGQRFKLNEPLSINATDFSQKPKLEAVPVKAADAVLTDTTFSAYATLRVD
                     YQ"
     gene            12293..>12543
                     /locus_tag="JNZ57_002696"
     CDS             12293..>12543
                     /locus_tag="JNZ57_002696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016242288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8828874.1"
                     /translation="MKTAHIYSPGYALLAGLLLTASTGAQAVDNNLHFYGNLLSKSCT
                     LVVDGANLAEIHFPTVSNRDLMVSGQSAHLPVVFKLKDC"
BASE COUNT         3159 a         2990 c         3328 g         3066 t
ORIGIN      
        1 gtatcctgga aatgcagaaa agtaaactct ttgagaagga cgagcagaac gcctgaaaat
       61 atgcctttcc cttcaggttt gtctgtggat accgcttatt gatttgaaag ggcaagctgc
      121 caacaggctg tttgcaaaac tcaggaggta agcaatgagg acactacttt cggtgaagtg
      181 ggggagttaa agtcacctgc tatgcaggtg actttatcca ggcgaacgcg ttatcagaac
      241 gcgtagttaa agttagtacc gaacagccag gctttacctt cagactcgaa ctggtatggg
      301 ccttcgttaa ttttcacgct ctgaccgtgc atataagaaa caccaacgtc gactgaagca
      361 tctttattaa atgcgtaagt cgtacctgca ctcagccaga aacggtcctg gtccggaatg
      421 gagatagaac gattctgagc cggaactggg ctgtcatcaa aggcgatacc ggtacggaag
      481 gtccagttat catcgtagta ataagtggta cccaacgcga tgcggtaagc atctttaaag
      541 ccttcatgtt tctggaacag cgtgttgcca ctggttgagg tcgctttcag ctgctggaac
      601 tgactccagc tggtgtaagc caggctatag tgaatcgccc actgtggatc aacacggtta
      661 taacctgaca cttcccacat ttcaggcagg ttcagcgtca gataacccga ttgcgttgcg
      721 ccacctgtcg cggtaggaat tggcaaaccg tagttattaa acgcacgatt aagatcgctg
      781 ctgtagttac ctttgaagtc aattttcact tcagaacggt aggtcagtgc atagcggtta
      841 tttttatcca gttcatacag gattccggcg ttccagccaa agccccactg gttaccgttc
      901 agatgagcga ttttggtatt actgtcgata ccgttggcgg tagctgccaa tgcttgccct
      961 tgaggagttt gcccggcagg agattgcata atctgaccag caaccaactg ccccagatcg
     1021 cctgcgaaac gttcaatttt cgcgcgagcg tagacggcgt tgaaaccaag accaaagctc
     1081 catgcattat ttaagcgata cgcaccgctt aagttcaggt tcatggtttc aaggtcagtt
     1141 gtacccccga cagagccgcc tgcataagta tcattaaact ctgttgccag accatagtta
     1201 gaggtaatag aagcgcccca accaaattgg tcgttaatcg gtgcaacaaa gtgcatgttc
     1261 ggaacccatg ccgtaggcgc gatgttatcg gctttcaggc tacgaccaga cggagacgtt
     1321 ccgctgatat tcacatccgg gtcaatataa accgcacccg cagaaaatgt cgggcggtca
     1381 aacatggtaa tcaatgcggg gttacggcta acgttacctg catcatcggc aattgcgcct
     1441 tcccctgaat aagcccggcc caggccagag gaagaaaatt cgtttaactg aaagcctgcc
     1501 gaccaggcct gggtggagat aagtgccact gcgactgcga gagcagactt tgtaaacagg
     1561 gttttctggc tcatgaccat aacctcaatg atttattttt atacaaacta tgttacgtgc
     1621 tgtaacagga gcgcgaagtg tagggtctga ggtacatctt agaaatcaga ccagtggcga
     1681 gagtataggt cggaccagct ggaatgttgc aagtatgttt ccatcttttt tcaaatatga
     1741 tctaagaaac gcgatccagc tggcaaaatt tggaggttgc gcactcgcgg attcgggtga
     1801 attttgtttt agagcatttt taagtgtgat ttcggtcact tatccgattt tgcagaatta
     1861 acaactggag cagcactttc cggaagcgta aaatatccac aacgtttatc tggcaccttg
     1921 ggtgcacata cagaggaaat caacgatgag taaatgtagt gctgatgaaa ccccggtttg
     1981 ctgctgtatg gatgttggca ccattatgga caactccgac tgcaccgcgt cttacagccg
     2041 cgtgtttgca aaccgcgcag aagcagaaca aacgctggcg gcgttgactg aaaaagcccg
     2101 tagcgtggaa tccgaaccgt gcaaaatctc cccgactttc actgaagagt ctgacggtgt
     2161 gcgcctggat atcgatttca cttttgcctg cgaagctgaa atgctgatct tccagctggg
     2221 tctgcgttaa ttcctctcgg gtacgttcgc ccctgtcagt tgctggcagg ggcgttttct
     2281 tttctttctc ctgtcttcac tgtgtcatag ctcccacttt cctttttctc cgcttggcta
     2341 aatgtaaaaa aatggttaag actatgatca ggtcagacca ctttatttat ttttttacag
     2401 gggagtgtta tgggtcaggt tttaccgctg gttacccgcc agggcgatcg tatcgccatt
     2461 gttagcggtt tacgtacgcc ttttgcccgc caggcgacgg cttttcatgg cattcccgcg
     2521 gttgatttag ggaagatggt ggtaggcgaa ctgctggcac gcagcgagat ccccgctgaa
     2581 gtgattgaac agctggtctt tggtcaggtc gtacaaatgc ctgaagcccc caacattgcg
     2641 cgtgaaattg ttctcggtac cggaatgaat gtgcataccg atgcttacag cgtcagccgc
     2701 gcttgcgcta ccagtttcca ggcggttgca aacgtcgcag aaagcctgat ggcgggaact
     2761 atccgagcgg ggattgccgg tggggcagat tcctcttccg tattgccaat tggcgtcagt
     2821 aaaaaactgg cgcgcgtgct ggttgatgtc aacaaagctc gaaccatgag ccagcgcctg
     2881 aaactcttct ctcgcctgcg tttgcgcgat ttaatgcccg taccgcctgc agtagcagaa
     2941 tattctaccg gcttgcggat gggtgacacc gcagagcaaa tggcgaaaac ctacggcatc
     3001 acccgagaac agcaagatgc attagcgcac cgttcgcatc agcgtgccgc tcaggcatgg
     3061 tcagacggaa aactcaaaga agaggtgatg actgccttta tccctcctta taaacaaccg
     3121 cttgtcgaag acaacaatat tcgcggtaat tcctcgcttg ccgattacgc aaagctgcgc
     3181 ccggcgtttg atcgcaaaca cggaacggta acggcggcaa acagtacgcc gctgaccgat
     3241 ggcgcggcag cggtgatcct gatgactgaa tcccgggcga aagaattagg gctagtgccg
     3301 ctggggtatc tgcgcagcta cgcatttact gcgattgatg tctggcagga catgttgttc
     3361 ggtccggcct ggtcaacacc gctggcgctg gaacgtgccg gtttgacaat gagcgatctg
     3421 acattgatcg atatgcacga agcctttgca gctcagacac tggcgaatat tcagttgctg
     3481 ggtagtgaac gttttgctcg tgaagtactg gggcgtgcac atgccactgg cgaagtggac
     3541 gatagcaaat ttaacgtgct tggcggttcg attgcttacg ggcatccctt cgcggcgacc
     3601 ggcgcgcgga tgattaccca gacattgcat gaacttcgcc gtcgcggcgg tggatttggt
     3661 ttagttaccg cctgtgctgc cggtgggctt ggcgcggcaa tggttctgga ggcggaataa
     3721 tggaaatggc atcagcgttt actcttaatg ttcgtctgga caacattgct atcatcacca
     3781 tcgacgtacc ggatgagaaa atgaataccc tgaaggcgga atttgcctcg caggtgcgcg
     3841 ccattattaa gcaactccgt gaaaacaaag agttgcgcgg cgtggtgttt atctccgcga
     3901 aaccggacaa ttttatcgcc ggagcagaca tcaacatgat cggcaactgc aaaacggcgc
     3961 aagaagcgga agctctggcg cggcagggcc aacagttgat ggcggagatt catgctttgc
     4021 ccattccggt tatcgcggct attcatggcg cttgcctggg tggtgggctg gagttggcgc
     4081 tggcgtgcca cggtcgcgtt tgtactgacg atcctaaaac ggtgctcggt ttgcctgaag
     4141 tacaacttgg attgttaccc ggttcaggcg gcacccagcg tttaccgcgt ctgataggcg
     4201 tcagcacagc attagagatg atcctcaccg gaaaacaact tcgggcgaaa caggcattaa
     4261 agctggggct ggtggatgac gttgttccgc actccatttt gctggaagtc gctgttgagc
     4321 tggcgaagaa ggatcgccca tcttcccgcc ctctacctgt acgcgagcgt attctggcgg
     4381 ggccgttagg tcgtgcgctg ctgttcaaaa tggtcggcaa gaaaacagaa cacaaaactc
     4441 aaggcaatta tccggcgaca gaacgtatcc tggaggttgt tgaaacggga ttagcgcagg
     4501 gcaccagcag cggttatgac gccgaagctc gggcgtttgg cgaactggcg atgacgccac
     4561 aatcgcaggc gctgcgtagt atcttttttg ccagtacgga cgtgaagaaa gatcccggta
     4621 gtgatgcacc gcctgcgcca ttaaacagcg tgggaatttt aggtggtggc ttgatgggcg
     4681 gcggtattgc ttatgtcact gcttgtaaag cggggcttcc ggtcagaatt aaagatatca
     4741 acccgcaggg cataaatcat gcgctgaagt acagttggga tcagctggag ggcaaagttc
     4801 gccgtcgtca tctcaaagcc agcgaacgtg acaaacagct ggcattaatc tccggaacga
     4861 cggactatcg cggctttgcc catcgcgatc tgattattga agcggtgttt gaaaatctcg
     4921 aattgaaaca acagatggtg gcggaagttg agcaaaattg cgccgctcat accatctttg
     4981 cttcgaatac gtcatcttta ccgattggtg atatcgccgc tcacgccacg cgacctgagc
     5041 aagttatcgg cctgcatttc ttcagtccgg tggaaaaaat gccgctggtg gagattattc
     5101 ctcatgcggg tacatcagcg caaaccatcg ccactacggt aaaactggcg aaaaaacagg
     5161 gcaaaacgcc cattgtcgtg cgtgacaaag ccgggtttta cgtcaatcgc atcttagcgc
     5221 cttacattaa tgaagctatc cgcatgctga ccaaaggtga acgggtagag cacattgatg
     5281 ccgcgctagt gaaatttggt tttccggtag gtccaatcca acttttggat gaggtaggaa
     5341 tcgacaccgg gactaaaatt attcctgtac tggaagccgc ttatggagaa cgttttagcg
     5401 cgcctgcaaa tgttgtttct tcaattttga acgatgatcg caaaggcaga aaaaatggtc
     5461 ggggtttcta tctttatggt cagaaagggc gtaaaagcaa aaaacaggtc gatcccgcca
     5521 tttacccgct cattggcgca caagggcagg ggcgactctc cgcaccgcag gttgctgaac
     5581 ggtgtgtgat gttgatgctg aatgaagcag tacgttgtgt tgatgagcag gttatccgta
     5641 gcgtgcgtga cggggatatt ggtgcggtat ttggcattgg ttttccgcca tttctcggtg
     5701 gaccgttccg ctatatcgat tctctcggcg cgggcgaagt ggttgcaata atgcaacgac
     5761 tggccacgca gtatggttcc cgttttaccc cttgcgagcg tttggtcgag atgggcgcgc
     5821 gtggggaaag tttttggaaa acaactgcaa ctgacctgca ataagaaggt caaagctata
     5881 tgaatccgcg ctgaatggcg gagtattggt caaaatgtaa acgcatattg actatactta
     5941 cgccattgag gtaaaaaaca gcgtttcatt cggtgaatgg ataaggcaca atgccggcca
     6001 ccgttttctt tctctggttt cagatgaaag aaaatgggcg aatctggtta acaaaagcgg
     6061 tgcaatatgc aagtttttat catgcgtcac ggcgacgcag ccctcgatgc cgccagtgat
     6121 tcggttcgtc ctctgaccac taatggttgt gacgaatctc gcctgatggc gaactggctg
     6181 aaaggtcaaa aagtggaaat cgaacgcgtt ctggtgagcc cgttcctgcg agccgagcaa
     6241 acactggaag aagtagggga ttgtctgaac ctgccttcca gtgcagaagt tctgccggag
     6301 ttaacgccct gcggcgatgt tggtctggtc agtgcctatt tgcaggcgtt gaccaatgaa
     6361 ggtgttgctt cggtactggt gatctctcac ttaccgttag tcgggtatct ggttgccgag
     6421 ttatgtccgg gcgaaacgcc gcctatgttt accacctcgg ccattgccag cgtaacgctt
     6481 gatgaaagcg gaaacggtac attcaactgg cagatgagcc cgtgtaatct gaagatggca
     6541 aaagctatct gatgtgttcc aaattatgcc caatgaggta gattcattgg gcataattgc
     6601 tcatcaggca gcggatatct gtcaacctca ctactatcga agactctcct tatctataaa
     6661 taaaacactt tctacattca ttcggaaatt attcttctgc gcgtatcttg attttgccca
     6721 aagttacatg ttgaaatgaa taatgtctgt ttgacactca ttgtcattta ttaatacaga
     6781 taatagagtt gaataatcag gcaggatgta attgaaactt gattaaattc tggctatagt
     6841 gtttatatat tatattgtca aaagtggata aatgccaatc gcattatatg ttcattgttt
     6901 gttttttaag ctgttgatat tcattattga tatactttct attttttcta aatacttatt
     6961 ccgtattttt taagaatgtc cttaagataa tctttcttct gtcaatatat taattaaatc
     7021 tacatttact ctttagtaaa attaaattgc atcaggggtg tggaaacatc actatgcggc
     7081 cccacaccaa cgaatacaat tttctacgac ctgttctttt tggatcgcat gccgtattca
     7141 atggctgggt ataaacattg gctattgact gaatcaatgt attgcaatgt ttatattttt
     7201 aattatttat agtttaagga caaataatga gtaagtttgt taaaacagct attgctgcgg
     7261 caatggtgat gggcgtgttc acctctacgg caacaatcgc tgcgggtaac aacggtactg
     7321 cacgttttta cggcaccatt gaagactcag tgtgttctat cgttccggac gatcacaaac
     7381 tggaagttga tatgggtgat atcggtgccg aaaaactgaa aaataacggc accaccacgc
     7441 cgaaaagttt ccagattcgt ctgcaagatt gcgtatttga tacttaggaa acaatgacca
     7501 ctacctttac aggtaccgtt tcttctgcaa atagcggcaa ttattacacc attttcaata
     7561 ccgataccgg tgcggcattt aacaatgtta gcctggcgat cggtgactct ctgggtacct
     7621 cttacaaaag cggcatgggt attgaccaga aaatagtgaa agacacttct actaataaag
     7681 gcaaagcgaa gcagacactg aactttaaag cctggctggt cggcgcagct gatgcgccag
     7741 atctgggtaa tttcgaagca aataccacct tccagattac ttacctgtaa ggcatacccc
     7801 catagcgaca ctgctatggg ggatttaaat ggattttgac cgaacaagaa taaaaacgga
     7861 tagaaacgtg tatgcctgac cattctcttt ttcgattacg gattcttccg tggtgcattg
     7921 cgctggcaat gtcagggagt tatagcagtg tctgggctga agacgacatt cagtttgatt
     7981 cccgttttct ggaattaaaa ggcgacacaa aaattgatct gaagcgtttt tccagccagg
     8041 gatatgttga gcccggaaaa tacaatttac aggttcaact aaataaacag ccattggcgg
     8101 aagagtacga tatttactgg tatgctggtg aagatgacgc gagcaaaagc tatgcttgtc
     8161 tgacaccgga actggtagcg cagtttggtt taaaagaaga cgtggcgaaa aatctgcaat
     8221 ggagccacga tgctaaatgc ctgaaatccg gtcaactgga aggcatggaa attaaggctg
     8281 atttaagcca gtccgcatta gtcatttcac tgccacaggc ttacctcgaa tatacttatc
     8341 ccgactggga tccgccttca cgttgggatg acggcatctc cgggatcgtc gcggactaca
     8401 gcatcaacgc acaaacccgg cacgaagaaa atggcggtga tgatagtaac gagatcagcg
     8461 gcaacgggac ggtcggggtt aacctggggc cgtggcgtat gcgtgctgac tggcagacta
     8521 actatcaaca tactcgcagt aatgatgacg atgaattcag cggcgatgaa actcaaaaaa
     8581 aatgggagtg gagtcgctac tatgcctggc gggcgttacc atcattaaaa gccaaactgg
     8641 cgctgggcga ggattacctc agatccgata tttttgatgg ttttaactat gttggtggca
     8701 gtgtcagtac tgacgatcaa atgttgcctc ccaatctgcg cggctacgcg ccagacattt
     8761 ccggcgtggc acacaccaca gcaaaagtga ccgtcagcca gatggggcgt gtgatttacg
     8821 aaacgcaggt tccggctgga ccgtttcgta ttcaggatct tggtgattct gtctccggta
     8881 cgttgcatat tcgcattgaa gaacagaacg gccaggtgca ggaatatgac atcagcaccg
     8941 cctcgatgcc atacctcact cgtccaggtc agattcgcta taagatcatg atgggccgtc
     9001 cgcaagagtg gggacaccat gtcgagggtg aatttttttc tggtgctgaa gcttcctggg
     9061 ggatcgctaa cggctggtcg ttatatggcg gcgcactggg agatgaaaac tatcagtctg
     9121 cggcgcttgg cgtcggtcgc gatttgtcta cattcggcgc ggtcgcgttt gatgttactc
     9181 actcgcacac caaactggat aaagacaccg cttatggcaa aggttcgctg gacggtaact
     9241 ccttccgtgt gagttattcc aaagactttg accagctcaa cagccgcgtt acttttgctg
     9301 gatatcgctt ctcggaagag aactttatga ccatgagcga gtatctggat gccagtgaca
     9361 gcggaatggt acgcacgggc aacgacaaag agatgtacac cgccacttat aaccagaact
     9421 tccgcgatgc gggtgtttcg gtttatctca actatacccg ccatacctac tgggatcgcg
     9481 aggagcagat aaactacaac atcatgctct cgcactattt caatatgggc agtattcgta
     9541 atgtcagcat ctcgatgact ggctaccgtt acgagtatga caaccaggcc gacaaaggca
     9601 tgtacatttc gctcagtatg ccgtggggcg acaacagtac cgttagctat aatggtaact
     9661 atggcagtgg gacggacagc agtcaggtcg gttatttcag ccgtgtcgat gacgcgactc
     9721 actatcagtt gaacgtcggc accagtgaca aacacaccag cgttgacggc tattacagcc
     9781 atgatggttc gctggcgcag gttgacctca gtgcgaacta ccatgaaggg caatacacct
     9841 ctgcgggctt gtcgttacag ggcggcgcaa cgcttactgc ccacggtggc gcacttcacc
     9901 gtacccagaa tatgggcggg acacgcttgt tgattgatgc cgatggcgtt gccgatgttc
     9961 cggtggaagg taacggggct gctgtttata ccaatatgtt tggtaaagcc gtcgtttctg
    10021 acgtcaataa ctattaccgc aatcaggcgt atatcgacct caacagattg cctgaaaacg
    10081 ctgaagcaac ccagtcggtg gtgcaagcca cgctaactga aggtgccatt ggctaccgta
    10141 aatttgctgt cattagcgga caaaaagcga tggcggtgct gcgcctgagc gacggcagcc
    10201 atcctccgtt tggcgcagaa gtaaaaaatg ataacgagca gacagtgggc cttgtcgatg
    10261 atgacggcaa tgtttatctg gctggggtga aacctggcga acacatgagt gtgttctgga
    10321 gtggtgttgc gcattgcgat atcaacctgc cggacccgct gcctgccgat ctgtttaacg
    10381 gcttgttact gccatgccag cataaaggca atgtagcacc tatcacttcg ccggcggtca
    10441 aaccggcgat tcaggaacag acacagcggg tgacgccaac ggaacctccg acttcaattt
    10501 cagtaaacca gtaacgtgat taaggaatga tccatgttta atctgactaa cactgcaaaa
    10561 atcgttgtcc cggcactggc gctgctggcg acagcggtca gtttctccag ccacgcttcg
    10621 gtgacgcccg acaggacacg gctggtgttt aacgaaagcg acaagtccat cagcgtcacg
    10681 ctgcgcaaca acgatcccac actgccttat ctggcgcaga gctggataga ggatgcaaag
    10741 ggcaacaaaa tcagctcgcc gcttgcggtg cttccgccag tgcagcgcat cgatgcgatg
    10801 atgaacggcc aggtgaaggt gcaggggctg ccggatatca acaaactgcc ggccgaccgc
    10861 gagagcgtgt tctatttcaa cgtgcgcgaa attccgctga aatcaaataa accgaacaca
    10921 ctgcagattg cgctgcagac gcgtatcaaa ctgttctggc gaccgaaggc gctggagaac
    10981 accagcatga aaagtccgtg gcagcataag gtgacgctca tccgtaacgg ccaggacttc
    11041 accgtcaata acccgacgcc gtactacgtg atcatcagca acgccagcgc taaaaaaggc
    11101 ggcaacccgc cggcgggatt cacaccgctg atgatggagc cgaaaacctc cgcaccgctg
    11161 aatgcgaaga tggacagcgt gccggtgctg acttacatca acgactacgg cgcgcggatg
    11221 ccgctgtact tcaaatgcac cggcaacagc tgccaggtgg atgaagagca gagccgcaaa
    11281 ggctgatgcc gggagggact tatgagtcac aagtttgtag cgggcgcagg gttgctggtg
    11341 ctggccggat ggggcatcag cggtttggct gttgctggca gtgatatcaa acaggtggat
    11401 ctgacgctgc gaatcctggt cgatggaccg ccgccttgct ccgtgaaggg aagcgctgtg
    11461 aaatttggca atgtgataat caacaggatc gatggtacca attaccaaca ggatgcgaaa
    11521 tacaccctca actgcggtaa taaagtcagc gatgacttac ggatgcagct caaaggcaat
    11581 accgccgtga tcaacggaga aacggttctc agcacggata tcgccggcct gggggtgcgg
    11641 atagaaaacg ccgccgacaa ctccctgttt gcagttggtg aaaataactg gacgcctttt
    11701 aatgtcaaca ctcagcctca gctgaaagcg gtgccggtaa aacagagcgg ggtgcaactg
    11761 acgccgtcgg agtttaacgc cacgatgacc atggtggtgg attaccaatg aaaaaattcc
    11821 tgctcctttt actgtgcgct ggttgcgggg ctgtgctggc ggcggaagat gacatcacat
    11881 tccacggtac gctgatgtcg ccgcccgcct gtagcatcag cggcgggcaa accatcgaag
    11941 tgcaatttcg cgatctcatt atcgacagca ttgatggcaa ttatggtcgt cagaaagtgg
    12001 actacgaact gagctgcgac tcggatgtcc gcgatcccga gtggaatatg acactctcct
    12061 ggacggggac tgccacctcc tacaacgact ctgctattga gacggatgta ccgggcttcg
    12121 gaattgagct tcagcatgac ggtcagcgtt ttaagctcaa cgagccgctt tccattaacg
    12181 ccaccgattt tagccagaag ccaaagctgg aggcggtacc ggtcaaagcg gctgatgcgg
    12241 tgctgacgga cacgaccttt tctgcttacg caaccttacg ggtggattac caatgaaaac
    12301 agcacacatt tattcacccg gttatgcgct gttagcaggc ctgctgctga ccgccagcac
    12361 aggagcacag gcagtcgaca acaacctgca tttttacggc aacctgctga gtaaatcctg
    12421 cacgctggtg gtggatggtg ccaacctggc agaaatccat tttcccaccg tcagcaaccg
    12481 ggatttgatg gtatctgggc agtccgcgca tctgccggtt gtgtttaagc tgaaagactg
    12541 caa
//
LOCUS       DADMHC010000119        12196 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.119, whole genome shotgun sequence.
ACCESSION   DADMHC010000119 DADMHC010000000
VERSION     DADMHC010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12196)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12196)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12196
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.119"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(63..212)
                     /locus_tag="JNZ57_002697"
                     /pseudo
     CDS             complement(63..212)
                     /locus_tag="JNZ57_002697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858395.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
     gene            489..1364
                     /locus_tag="JNZ57_002698"
     CDS             489..1364
                     /locus_tag="JNZ57_002698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001224622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-regulated protein"
                     /protein_id="HAY8828875.1"
                     /translation="MRKFILISMITLASVSLGACRQNVTIKQDAPGQKAFLIDGQIYD
                     LHSGKIISSSELLADLATARHLIIGEKHDNAEHHQIELWLIQNLLIQRPQGSVLLEML
                     TSDQQPRVNQVKCWLKDNPVVRDSRVQELLNWQKGWSWEMYGDIVMQLLRGPYPLLNA
                     NIGREQMLALYKKNEFPKGKKSTAPVVQEALRETIIAMHEGNLESQQLTSMLSVQQQR
                     DRYMARQLLSAPVPSLLIAGGYHASKSMGVPLHMEDLATGTHPVVLMLAEKGMNITVD
                     HADYVWFVAPDTTKR"
     gene            1372..2148
                     /locus_tag="JNZ57_002699"
     CDS             1372..2148
                     /locus_tag="JNZ57_002699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004095468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HAY8828876.1"
                     /translation="MMNILHFPQSVKWSSWFICSLLLHGLIFLTFIWRFSEVQPAMSP
                     APAIMLQWAEIIEAPSSPLSLPVGIAQQESAVTEEKQQTEDRQQRPVTEDSDATIEIT
                     RKKKSSDGEKKKTRPPRKIKAQTSDSNPTAVSSNAAPQALVESSRIAAPFNSDSTKRD
                     NSEASWESRVKGHLNRYKRYPGDARKRARTGTAVVTFTVNTEGTIVSSFLEISSGTLS
                     LDREAIAVLERAQPLPKPPPEILEGGLFKVKMPITFKLKE"
     gene            2317..4578
                     /locus_tag="JNZ57_002700"
     CDS             2317..4578
                     /locus_tag="JNZ57_002700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016536327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HAY8828877.1"
                     /translation="MNVIKLAIGSGILLLSCGAYSQSISEKTNSDKKGAAEFSPLSVS
                     VGKTTSEQEALEKTGATSSRTTDKNLQSLDATVRSMPGTYTQIDPGQGAISVNIRGMS
                     GFGRVNTMVDGITQSFYGTSTSGTTAHGSTNNMAGVLIDPNLLVAVDVTRGDSSGSEG
                     INALAGSANMRTIGVDDVIFNGNTYGLRSRFSVGSNGLGRSGMIALGGKSDAFTDTGS
                     IGVMAAVSGSSVYSNFSNGSGINSKEFGYDKYMKQNPKSQLYKMDIRPDEFNSFELSA
                     RTYENKFTRRDITSDDYYIKYHYTPFSELIDFNVTASTSRGNQKYRDGSLYTFYKTSA
                     QNRSDALDINNTSRFTVADNELEFMLGSKLMRTRYDRTIHSAAGDPKANQESIENNPF
                     APSGQQDISALYTGLKVTRGIWEADFNLNYTRNRITGYKPACDSRVICVPQGSYDIDD
                     KEGGFNPSVQLSAQVTPWLQPFIGYSKSMRAPNIQEMFFSNSGGASMNPFLKPERAET
                     WQAGFNIDTRDLLVEQDALRFKALAYRSRIQNYIYSESYLVCSGGRKCSMAEVIGNDW
                     EGISDEYSDNMYIYVNSASDVIAKGFELEMDYDAGFAFGRLSFSQQQTDQPTSIASTY
                     FGAGDMTELPRKYMTLDTGVRFFDNALTLGTIIKYTGKARRLSPDFEQDEHTGAIIKQ
                     DLPQIPTIIDLYGTYEYNRNLTLKLSVQNLMNRDYSEALNKLNMMPGLGDESHPANSA
                     RGRTWIFGGDIRF"
     gene            4647..5822
                     /gene="senB"
                     /locus_tag="JNZ57_002701"
     CDS             4647..5822
                     /gene="senB"
                     /locus_tag="JNZ57_002701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001020413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterotoxin production-related protein TieB"
                     /protein_id="HAY8828878.1"
                     /translation="MNIFTLSKAPLYLLISLFLPTMAMAIDPPERELSRFALKTNYLQ
                     SPDEGVYELAFDNASKKVFAAVTDRVNREANKGYLYSFNSDSLKVENKYTMPYRAFSL
                     AINQDKHQLYIGHTQSASLRISMFDTPTGKLVRTSDRLSFKAANAADSRFEHLRHMVY
                     SQDSDTLFVSYSNMLKTAEGMKPLHKLLMLDGTTLALKGEVKDAYKGTAYGLTMDEKT
                     QKIYVGGRDYINEIDAKNQTLLRTIPLKDPRPQITSVQNLAVDSASDRAFVVVFDHDD
                     RSGTKDGLYIFDLRDGKQLGYVHTGAGANAVKYNPKYNELYVTNFTSGTISVVDATKY
                     SITREFNMPVYPNQMVLSDDMDTLYIGIKEGFNRDWDPDVFVEGAKERILSIDLKKS"
     gene            complement(6195..6383)
                     /locus_tag="JNZ57_002702"
                     /pseudo
     CDS             complement(6195..6383)
                     /locus_tag="JNZ57_002702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000198547.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            6446..6631
                     /locus_tag="JNZ57_002703"
                     /pseudo
     CDS             6446..6631
                     /locus_tag="JNZ57_002703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001775038.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
     gene            6774..6995
                     /locus_tag="JNZ57_002704"
                     /pseudo
     CDS             6774..6995
                     /locus_tag="JNZ57_002704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            complement(7016..7078)
                     /locus_tag="JNZ57_002705"
                     /pseudo
     CDS             complement(7016..7078)
                     /locus_tag="JNZ57_002705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001743492.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
     gene            7529..8941
                     /gene="ospC1"
                     /locus_tag="JNZ57_002706"
     CDS             7529..8941
                     /gene="ospC1"
                     /locus_tag="JNZ57_002706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspC1"
                     /protein_id="HAY8828879.1"
                     /translation="MNISETLNSANTQCNIDSMDNRLHTLFPKVTSVRNAAQQTMPDE
                     KNLKDSANIIKDFFRKTIAAQSYSRMFSQGSNFKSLNIAIDAPSDAKASFKAIEHLDR
                     LSKHYISEIREKLHPLSAEELNLLSLIINSDLIFRHQSNSDLSDKILNIKSFNKIQSE
                     GICTKRNTYADDIKKIANHDFVFFGVEISSHQKKHPLNTKHHTVDFGANAYIIDHDSP
                     YGYMTLTDHFDNAIPPVFYHEHQSFLDKFSEVNKEVSRYVHGSKGIIDVPIFNTKDMK
                     LGLGLYLIDFIRKSEDQSFKEFCYGKNLAPVDLDRIINFVFQPEYHIPRMVSTENFKK
                     VKIREISLEEAVTASNYEEINKQVTNKKIALQTLFLSITNQKEDVALYILSNFEITRQ
                     DVISIKHELYDIEYLLSAHNSSCKVLEYFINKGLVDVNTKFKKTNSGDCMLDNAIKYE
                     NAEMIKLLLKYGATSDNKYI"
     gene            complement(9045..9193)
                     /locus_tag="JNZ57_002707"
                     /pseudo
     CDS             complement(9045..9193)
                     /locus_tag="JNZ57_002707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611146.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            9269..10966
                     /gene="ospD3"
                     /locus_tag="JNZ57_002708"
     CDS             9269..10966
                     /gene="ospD3"
                     /locus_tag="JNZ57_002708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector OspD3"
                     /protein_id="HAY8828880.1"
                     /translation="MPSVNLIPSRKICLQNMINKDNVSVETIQSLLHSKQLPYFSDKR
                     SFLLNLNCQVTDHSGRLIVCRHLASYWIAQFNKSSGHVDYHHFAFPDEIKNYVSVSEE
                     EKAINVPAIIYFVENGSWGDIIFYIFNEMIFHSEKSRALEISTSNHNMALGLKIKETK
                     NGGDFVIQLYDPNHTATHLRAEFNKFNLAKIKKLTVDNFLDEKHQKCYGLISDGMSIF
                     VDRHTPTSMSSIIRWPNNLLHPKVIYHAMRMGLTELIQKVTRVVQLSDLSDNTLELLL
                     AAKNDDGLSGLLLALQNGHSDTILAYGELLETSGLNLDKTVELLTAEGMGGRISGLSQ
                     ALQNGHAETIKTYGRLLKKRAINIEYNKLKNLLTAYYYDEVHRQIPGLMFALQNGHAD
                     AIRAYGELILSPPLLNSEDIVNLLASRRYDNVPGLLLALNNGQADAILAYGDILNEAK
                     LNLDKKAELLEAKDSNGLSGLFVALHNGCVETIIAYGKILHTADLTPHQASKLLAAEG
                     PNGVSGLIIAFQNRNFEAIKTYMEIIKNENITPEEIAEHLDKKNGSDFLEIMKNIKS"
     gene            11083..11202
                     /locus_tag="JNZ57_002709"
                     /pseudo
     CDS             11083..11202
                     /locus_tag="JNZ57_002709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001355812.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence hypothetical
                     protein"
     gene            11369..11641
                     /locus_tag="JNZ57_002710"
     CDS             11369..11641
                     /locus_tag="JNZ57_002710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_145811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828881.1"
                     /translation="MSHNLEHQKVHTRMVKEVLKAVARANNHPYKSVFADFITGHPSC
                     TVCFWETFHKMYPDSPYEYVTFCHTCRRFDLYETEAEMKADDPKWW"
     gene            11622..>12196
                     /locus_tag="JNZ57_002711"
     CDS             11622..>12196
                     /locus_tag="JNZ57_002711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004150716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91-like element ISSbo1 family transposase"
                     /protein_id="HAY8828882.1"
                     /translation="MTRSGGDFQPRPLKRLFTANQCWTSFLDAGGLRDIGVEAVTKML
                     ACGTRILGVKEYICDKPECPHVRYVTNSCGSRACPSCGKKATDLWIATQLNRLPDCDW
                     VHLVFTLPDTLWPVFESNRWLLNDVCRLAVENLLYAARKRGQEPGIFCAIHTYGRRLN
                     WHPHVHVSVTCGGLNKHGQWKKLSFLKDSMRS"
BASE COUNT         3665 a         2666 c         2659 g         3206 t
ORIGIN      
        1 gggatgtgct gtttcagcct cgcgaccagc tcacgctgtg tcagcgtttc cgtcgccgtt
       61 tatcccgttt tgtggtccag gtaacggaag ctcaggctcg cccctccgtt gtaatgtgcc
      121 agccgggagg ccgctatcgg cggcttcttc agataacgac ccaggtagcg cgccgtattc
      181 ctcccgccgg ccgttttctt cgacatgtac atcaggcgcg gagctcatcg gggcgcggga
      241 atgaaatccc attcagactc cggatagatt caagcaagcc cacttatcgt caaaatcggt
      301 gttgcaaaaa cgggagtgac catagatccg ttttccaagc ggaccccata atatcggctg
      361 gtaaacatca ctcgctagtg cattcttttt gttggtaatg ataattattt acatttattc
      421 tttgatgttt tatcataatt aatgttttat caataaatat atggaaatat attgtttcag
      481 atgggaatat gagaaagttc atccttattt ctatgataac gttagctagt gttagtctgg
      541 gagcctgcag acagaatgtc accataaagc aggatgcgcc agggcagaaa gctttcctga
      601 ttgacgggca gatttacgat ttgcacagtg gcaaaattat ttctagcagc gagcttttgg
      661 cggatcttgc taccgctcga catcttatta ttggtgaaaa acacgataat gccgagcatc
      721 atcagattga gctttggctt attcaaaatc tgctcatcca gcgaccacag gggagtgtgt
      781 tgcttgagat gttgacgtca gaccaacagc cccgagttaa ccaagttaaa tgttggctga
      841 aagataatcc tgtggttcga gatagccgtg ttcaggaact acttaactgg caaaaagggt
      901 ggtcctggga gatgtatggc gacatcgtca tgcagctatt acgtgggcct tacccgctgc
      961 tcaatgccaa cattggccgg gagcagatgt tggcactgta caaaaaaaac gaatttccta
     1021 aaggaaaaaa atccactgca cctgtggtac aagaagctct gcgtgaaacc atcatagcta
     1081 tgcatgaagg caaccttgaa agccagcaac tgacgtcaat gctctctgtt cagcagcagc
     1141 gggatcgcta catggcccgc cagcttctga gtgccccggt accgtcgttg ttgattgcag
     1201 gtggttatca cgcgtcaaaa agcatgggcg taccgttaca catggaagat cttgccaccg
     1261 gcacccatcc agtggtgttg atgcttgcag aaaaaggaat gaacatcaca gtagatcatg
     1321 ctgactacgt gtggtttgta gcgccagata caacaaaaag gtaaaccatg gatgatgaat
     1381 attctccact tcccacagtc ggtaaaatgg agcagctggt ttatctgttc tctactgctt
     1441 catggactga ttttccttac gtttatctgg cgtttttccg aagttcagcc cgctatgtct
     1501 cctgcaccgg cgatcatgct gcaatgggca gaaattatag aggctccttc ttctccactt
     1561 tcgcttccgg tgggaatcgc tcaacaggag tccgcagtga cagaagaaaa gcaacaaact
     1621 gaggacagac aacaacgtcc tgtcactgaa gacagtgatg caaccattga aataactagg
     1681 aagaaaaagt catccgatgg agaaaagaaa aagacacgtc cacctcgtaa gataaaggct
     1741 caaaccagcg acagcaaccc cacagccgtt tccagtaatg ctgcacctca ggctctggtc
     1801 gaatcgtccc gtattgctgc gccttttaac agtgactcaa caaagcgaga taattctgag
     1861 gcatcttggg aaagcagagt aaaaggccac cttaaccgtt ataaacgtta ccctggcgat
     1921 gccagaaaac gtgcacgaac cggcacagcc gttgtgactt ttaccgtaaa cacggaaggc
     1981 actattgtca gtagtttctt ggaaatctct tcaggaaccc tttctcttga ccgcgaagct
     2041 attgctgttt tagaacgcgc tcaaccactt cccaaaccac cgcctgaaat attggaggga
     2101 ggattattta aagtaaaaat gccgattacc tttaagttga aggagtaaag ggataattgg
     2161 ccgttcaagt tcatttaact gaaatttaat tttcattttt atgcttaaca ttttatcaaa
     2221 cttttccact gtcgaaaaaa tcaaaaagac agtagatcat aattaataaa caaatagtta
     2281 tacttatctt tattaatatt atatccaagg aaatttatga acgttataaa actggctatc
     2341 ggctcaggca tattattgct cagctgcggt gcttactcac aatccatcag tgaaaaaact
     2401 aattccgaca aaaaaggagc ggcagaattc agtccgctca gcgtttctgt cgggaagacg
     2461 accagtgagc aggaagctct cgagaaaaca ggcgcgacca gttcccggac aacggacaaa
     2521 aacctgcaat cacttgacgc aacagtgcgt agtatgcctg gtacttatac tcaaatagat
     2581 cctggtcagg gagcaatcag tgtgaatatt cgaggcatga gcggatttgg tcgtgtaaac
     2641 actatggtcg atggtattac ccagagtttt tacggaacct ctacctccgg aacaacggcg
     2701 catggttcaa ctaacaatat ggctggcgta cttatagatc ctaacttact ggtagcagtt
     2761 gatgttacac gcggtgacag cagtggctct gaagggatca acgcccttgc cggtagtgca
     2821 aatatgcgta ctattggcgt tgacgatgta atatttaacg gtaatacata tggccttcgt
     2881 tcacgtttct ctgtcggtag taatgggctg ggacgcagcg gaatgatcgc ccttggtgga
     2941 aaaagcgacg cttttacgga tacgggaagc attggcgtta tggctgctgt gagcggcagt
     3001 tctgtgtact ctaatttctc aaatggttct ggaattaaca gcaaagagtt tggttatgat
     3061 aaatatatga agcagaaccc caaatcccaa ctgtataaaa tggatatcag accagacgaa
     3121 tttaacagct tcgaactttc cgctcgaacc tatgaaaata aatttacacg tcgtgatata
     3181 accagtgacg actattacat taaatatcat tacacccctt tttctgaatt aattgacttt
     3241 aacgtaacgg ccagtaccag tcgcggtaat caaaagtatc gtgatggctc gctgtatact
     3301 ttctacaaaa cctcagcgca aaatcgttct gacgcgctgg atatcaacaa taccagccgg
     3361 ttcactgtcg cggacaatga actggagttt atgctgggca gcaaactgat gcgtacccgc
     3421 tatgaccgga ccattcactc agcggcgggc gacccgaaag cgaaccagga atcgatcgag
     3481 aacaatccgt tcgcaccctc cggccagcag gatatttcag cgctgtatac cgggctgaag
     3541 gttacgcgcg gcatctggga ggcagatttc aatctcaact acacacgtaa caggatcaca
     3601 gggtacaagc ccgcctgcga ttcacgcgtt atctgcgtgc cacagggtag ctacgatatt
     3661 gacgataaag agggtggctt caacccttca gttcagcttt ctgctcaggt aacaccatgg
     3721 cttcagccgt tcattggcta cagcaaatcc atgcgtgccc cgaacatcca ggagatgttc
     3781 ttctctaatt caggaggcgc atccatgaac ccattcctga agcctgaacg tgcagaaacc
     3841 tggcaggcgg gttttaacat tgataccaga gatttactgg tcgaacagga tgccctgcgc
     3901 tttaaggctc tggcgtaccg cagcaggatc cagaactaca tctacagcga gtcttatctg
     3961 gtttgttctg gaggtcgtaa atgcagtatg gctgaggtga ttggcaatga ctgggagggc
     4021 attagcgatg aatacagcga caatatgtac atctacgtta actcggcaag cgacgttatt
     4081 gcaaagggct tcgaactgga gatggattat gatgcaggtt ttgcttttgg ccgactctct
     4141 ttcagccagc agcaaacaga ccagccaacc tccatcgcca gcacctactt tggcgcaggg
     4201 gatatgaccg aactgcccag aaaatacatg acgctggata ctggtgttcg cttcttcgat
     4261 aacgcgttga ccctgggcac tatcataaaa tacacaggca aggctcgtcg cctgtcgcct
     4321 gattttgagc aggacgaaca taccggcgca ataatcaaac aggatttgcc gcagatccca
     4381 acgattatcg atctctatgg tacttacgag tacaaccgca acctgacact gaaactttcg
     4441 gtacaaaacc tgatgaacag agattattcg gaggcgctga ataagctcaa catgatgcca
     4501 ggtcttggtg acgagagcca cccagccaat tccgcgcgtg gcagaacatg gatatttggc
     4561 ggggacattc gtttctgatg acaatttccg ccaggttcag acaatacgtt ttctctctta
     4621 tgtcaatttt attgcaggaa cgaaaaatga atattttcac tttatccaaa gcaccgctat
     4681 acttgttaat ttcactattt ttacccacga tggccatggc tatcgatcca cctgaacgcg
     4741 aactttcgcg atttgccctg aaaacgaatt accttcagtc ccctgatgaa ggcgtctatg
     4801 aactggcgtt tgataatgcc agtaaaaagg tgtttgcagc agtcaccgat cgtgtaaatc
     4861 gtgaagccaa taaaggctat ctgtattcgt ttaattcaga ttcgctgaaa gtcgaaaata
     4921 aatacacgat gccataccgg gcattttcgc tggcgataaa tcaggataaa catcagctct
     4981 atatcggaca cacccagtca gcgtccctgc gtatcagtat gtttgacacc ccaaccggta
     5041 aactggtaag aaccagcgac aggttaagtt ttaaagcggc aaacgctgca gattcgcgtt
     5101 ttgagcattt gcgccatatg gtttacagcc aggattccga taccctgttt gtgagttata
     5161 gcaatatgct gaaaacggcc gagggcatga agcctctgca taagctgtta atgctcgacg
     5221 ggacgacgct tgccttaaaa ggcgaggtta aggatgctta caaaggtaca gcgtatggtc
     5281 tgacgatgga tgaaaaaaca cagaaaatct acgttggcgg aagagattac atcaacgaaa
     5341 ttgatgcgaa aaatcagacg ctgctgcgta ccatcccgtt gaaagatccg agaccacaaa
     5401 tcacaagtgt gcagaatctg gcggtggact ccgcttctga ccgtgccttt gtggtggtat
     5461 tcgaccatga cgatcgttcc ggtacaaaag atggcctcta tatttttgac ttacgcgacg
     5521 gtaaacagct tggctatgtg cacacaggag ccggagctaa cgcggtgaaa tacaatccga
     5581 aatataacga actgtatgtc accaacttca ctagcggcac catcagcgta gtggatgcca
     5641 ccaaatacag catcacccgt gaatttaaca tgccggtcta cccaaaccag atggtgttgt
     5701 cggacgatat ggataccctt tacattggca tcaaagaagg ctttaaccgc gattgggatc
     5761 ctgatgtgtt tgtggaagga gctaaagaac gtattctgag cattgatttg aaaaagtcgt
     5821 gatcggggga aaaaacatgg gataaaaact ccgttattcc actaaactgg ccggactagg
     5881 aaaagcaaac atctctgtcc tgccggtacg cctgttacgc cgctccatga ggctgaggaa
     5941 tctccagaaa acgagacagg cacagcattg tacgatcaac tgatttgtgc caataattca
     6001 atgaaatcac agctatgcct gttcacgtat aggaaattga aaaactaagc gataccactg
     6061 tccgcgtctt atgcctcgtg cggtaagctg tttttcacat cacgccggtg tttttttctt
     6121 tctgtggacg gttttaatac tgtaatcggc cgttttttat acttaccccg attcccgggc
     6181 gcacttatcc tgcatcaccc cgggatatac ctcagcagac tgatatcccg cgcgtttttc
     6241 ttcagcccct ccacattcag tcccgcgatg gcccggcggt ataccatccg gccgccacac
     6301 agcacgcatt cgaacgggtc acgactcagg aactgtttca ccatttgtgc atagcacact
     6361 ttcgccactg gttccggttt atcctgtttt tataacggta attgcagacc atgacaaacc
     6421 gcagccgtca ggctgcctac tcgagtcaca aagctctctg tgtccgatat gccggcagcg
     6481 cattacccat gaaactggct ggaacgtaca ccataaggtg aagaaagtta tggggggcgg
     6541 tgaagaatta tctaaccttg tcttgttaca tccaaattgc catcgacagt tacacagttg
     6601 tgaagccggc tctctcaaaa agggcttata aaggcttgag cggtgtaccg ggaaaccggt
     6661 atgcaccgtt cttaggggag ggcagtccag caatgaactg tccttacccg acaaacatcc
     6721 aaaacgaacg gaacgtgctg gaatccgcat ataacccgtt gtaaagtgag gaaatggaca
     6781 cctcacttgc tcatgagaac gcccgcctgc gggcactgtt gcagacgcaa caggacacta
     6841 tccaccagat ggctgaatac aaccgcctgc tctcacagcg gatggcggct tatgcttccg
     6901 aaatcaaccg actgaaggcg ctggttgcga aactgcagcg tatgcagttc ggtaaaagct
     6961 cagaaaaact tcgcgcaaaa accgaacggc agattccatt ttcacgggcg atctacgcca
     7021 cacaggctct gggttgcagt gactgctcca ttaaggcgat tttgaactca taagggaagt
     7081 aacaaaaaaa ctgcaaaagt acaataatta tatatggcca aactaacctc tattaaaaaa
     7141 acatcagttt ttcacactta gttgagcttc atgaaaaaat catcgaggat ttcattgcag
     7201 aatacacatt ctactaactg gaagcactcc ataagaggaa tcagagaaag tatcgttttt
     7261 ttatagtaaa attcattgct gttcaataaa attgatatag ttattaaatt atgaaaataa
     7321 tttcacaaaa aagattaact tgagttctta agcatcggat tttagatatt ttgaaatatc
     7381 tggcatcaca taacatcaaa agtatataat acccttatct aattacatgc agtatattgt
     7441 atatatactc aaaaattgta attcataccc tactatatct tgtggggaaa gatattaatt
     7501 aaaactgttt tcatataagg ttcattttat gaatatatca gaaacactga actcagcaaa
     7561 tacccaatgc aatatagatt ctatggataa cagattacat acattatttc caaaagtgac
     7621 atcagtgcga aacgctgcac aacaaactat gccagatgaa aaaaatttaa aagatagtgc
     7681 aaatattatt aaagatttct ttaggaaaac tatagcagca cagagttata gtagaatgtt
     7741 ctctcaaggc tctaacttta aatctttaaa tatagcaatt gatgcaccat cagacgctaa
     7801 agcctcattt aaggctattg agcaccttga cagattatcg aagcattata tatctgaaat
     7861 aagggaaaaa cttcatcctc tttctgcaga ggaactcaat ttgctttcgc taattattaa
     7921 ttctgattta atcttcagac atcaaagtaa ttctgatttg tctgataaaa ttttaaacat
     7981 taagtcattc aataaaattc agtctgaagg aatatgcaca aaacgaaaca catacgctga
     8041 tgatataaaa aaaatagcta atcatgactt tgtgtttttt ggcgttgaaa tctctagcca
     8101 tcagaaaaaa caccccctga atacaaaaca tcacactgtt gattttggtg caaatgcgta
     8161 tatcattgat catgactctc catatggata tatgacatta accgatcact ttgataatgc
     8221 tattccacct gttttttacc atgagcacca atcattttta gataaatttt cagaggttaa
     8281 taaagaagtt agtcgatacg tacatggaag taaaggaatt atagatgtac caatattcaa
     8341 tactaaagat atgaagttag ggctcggatt atacctgatt gactttatta gaaaaagtga
     8401 agaccaaagc ttcaaggagt tttgctatgg aaaaaatctt gcccctgtgg atctggatag
     8461 aatcataaac tttgtttttc agccagagta ccatatacct aggatggtaa gtacagaaaa
     8521 cttcaaaaaa gttaagatta gagaaatatc cttagaggag gctgttacag catctaatta
     8581 cgaagaaatt aacaagcagg tcactaacaa aaaaattgct ctccagactc tttttctttc
     8641 gattactaat caaaaagagg atgtcgcctt atatatatta tctaattttg agataactag
     8701 acaagatgtt atttccataa agcatgagtt gtatgatatt gagtatctac ttagcgctca
     8761 taattcaagc tgtaaagtac ttgagtattt tatcaataag ggattggttg atgtaaacac
     8821 aaagttcaaa aaaactaata gtggggattg tatgttggat aacgcaataa aatatgagaa
     8881 tgcagaaatg ataaaactat tattgaaata tggtgcaaca tctgacaata aatatattta
     8941 atcaaaattg aatatcgttt agcaaaaggc agtatttgca caaaatatcg atatattgtt
     9001 tattgtcagt atggctcaat gtgataatag ttggaaagtt tgatgggttt cgccccgttg
     9061 tagcggtagt cgagctggaa ggtcttcagg cactgcttac agcgatagag cagcccccct
     9121 gaactggaat ggccgttccg gataccccct gagtttcaga gtaacgggga caaaccacat
     9181 caatctttgc catcaatcat ccaaagggca aagagtacaa caacactaag tctgcgtcac
     9241 aacccatcaa tgaaaggaat atatacatat gccatcagta aatttaatcc catcaaggaa
     9301 aatatgtttg caaaatatga taaataaaga caacgtctct gttgagacaa tccagtctct
     9361 attgcactca aaacaattgc catatttttc tgacaagagg agttttttat taaatctaaa
     9421 ttgccaagtt accgatcact ctggaagact tattgtctgt cgacatttag cttcctactg
     9481 gatagcacag tttaacaaaa gtagtggtca cgtggattat catcactttg cttttccgga
     9541 tgaaattaaa aattatgttt cagtgagtga agaagaaaag gctattaatg tgcctgctat
     9601 tatttatttt gttgaaaacg gttcatgggg agatattatt ttttatattt tcaatgaaat
     9661 gatttttcat tccgaaaaaa gcagagcact agaaataagt acatcaaatc acaatatggc
     9721 attaggcttg aagattaaag aaactaaaaa tgggggggat tttgtcattc agctttatga
     9781 tcccaaccat acagcaactc atttacgagc agagtttaac aaatttaact tagctaaaat
     9841 aaaaaaactg actgtagata attttcttga tgaaaaacat cagaaatgtt atggtcttat
     9901 atccgacggt atgtctatat ttgtggacag acatactcca acaagcatgt cctccataat
     9961 cagatggcct aataatttac ttcaccccaa agttatttat cacgcgatgc gtatgggatt
    10021 gactgagcta atccaaaaag taacaagagt cgtacaacta tctgaccttt cagacaatac
    10081 gttagaatta cttttggcag ccaaaaatga cgatggtttg tcaggattgc ttttagcttt
    10141 acaaaatggg cattcagata caatcttagc atacggagaa ctcctggaaa cttctggact
    10201 taaccttgat aaaacggtag aactactaac tgcggaagga atgggaggac gaatatcggg
    10261 tttatcccaa gcacttcaaa atgggcatgc agaaactatc aaaacatacg gaaggcttct
    10321 caagaagaga gcaataaata tcgaatacaa taagctgaaa aatttgctga ccgcttatta
    10381 ttatgatgaa gtacacagac agatacccgg actaatgttt gctcttcaaa atggacatgc
    10441 agatgctata cgcgcatacg gtgagctcat tcttagcccc cctctcctca actcagagga
    10501 tattgtaaat ttgctggcct caaggagata tgacaatgtt cccggacttc tgttagcatt
    10561 gaataatgga caggctgatg caatcttagc ttatggtgat atcttgaatg aggcaaaact
    10621 taacttggat aaaaaagcag agctgttaga agcgaaagat tctaatggtt tatctggatt
    10681 gtttgtagcc ttgcataatg gatgtgtaga aacaattatt gcttatggga aaatacttca
    10741 cactgcagac cttactccac atcaggcatc aaaattactg gcagcagaag gcccaaatgg
    10801 ggtatctgga ttaattatag cttttcaaaa taggaatttt gaggcaataa aaacttatat
    10861 ggaaataata aaaaatgaaa atattacacc tgaagaaata gcagaacact tggacaaaaa
    10921 aaatggaagt gattttctag aaattatgaa gaatataaaa agctgaatat tatctcgtgg
    10981 tgatacactg aatttgaggt aaccggctca tttaaaccgt ctggtctgtt tcctccggct
    11041 ccacaaaaat aatgtccatc attttgaagt ggacactatc gtatggaata ccggacctgg
    11101 atcactgaag ctttacgcct tcatttcgaa gaacatttac cacgggttgt ggccggacgt
    11161 cgcctgggcg taccaaaatc aactgtctgt ggtatgttcg tgtgaaccac ccccggtatc
    11221 ccgctcatgc tggcgaaccc agacacgcag tgaaccgccc cgggtttcct ggagagtgtt
    11281 ttatctgtga accacggcag cctggcggct gcaaatcggg gtgtggcaga atatgagctt
    11341 tcagagtaac catccagaat gagttcccat gtcacacaac ctggagcacc agaaagtcca
    11401 caccagaatg gtgaaagagg ttctgaaagc cgtcgccaga gccaataatc acccttataa
    11461 gtccgtattt gcagacttta tcaccggtca tccctcctgc acggtctgtt tctgggaaac
    11521 cttccacaaa atgtacccgg attcaccgta cgaatacgtc acgttctgcc atacctgccg
    11581 tcgttttgat ttatacgaaa cagaagcgga gatgaaggcg gatgacccga agtggtggtg
    11641 attttcagcc ccgcccgctg aaacgcctgt tcacagccaa ccagtgctgg acgtccttcc
    11701 tggatgcggg cggtctgcgc gatatcgggg ttgaggctgt cacaaaaatg ctggcctgcg
    11761 gcacgcggat actgggagtg aaggaataca tctgcgataa acctgagtgc ccccacgtca
    11821 gatacgtcac taactcatgc ggcagccgtg cctgcccgtc ctgcggaaaa aaggccacag
    11881 acctgtggat agcgacacag ctgaatcgtc ttcctgactg cgactgggta cacctggtct
    11941 tcaccctgcc ggacacgctg tggccggtgt tcgaaagcaa ccggtggctg ctgaatgacg
    12001 tgtgccgtct ggcggtggag aatctgctgt atgccgcccg gaaacggggg caggaacccg
    12061 gtatcttctg cgccatccac acgtatggcc gtcgtctcaa ctggcatccg catgtacatg
    12121 tgtctgtaac ctgtggaggt ctgaataagc atggtcagtg gaaaaagctg agcttcctga
    12181 aagactcgat gcgttc
//
LOCUS       DADMHC010000120        11999 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.120, whole genome shotgun sequence.
ACCESSION   DADMHC010000120 DADMHC010000000
VERSION     DADMHC010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11999)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11999)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11999
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.120"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(157..471)
                     /locus_tag="JNZ57_002712"
                     /pseudo
     CDS             complement(157..471)
                     /locus_tag="JNZ57_002712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418152.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIB family hydrolase"
     gene            complement(586..993)
                     /locus_tag="JNZ57_002713"
     CDS             complement(586..993)
                     /locus_tag="JNZ57_002713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001311237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidB family protein"
                     /protein_id="HAY8828883.1"
                     /translation="MIIMGLFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQS
                     GGLGAILSTWLSNQQSNQSVSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPK
                     IIDALSPQGEVSSQANNDLLSAGMELLKGKLFR"
     gene            complement(1223..3637)
                     /gene="gyrB"
                     /locus_tag="JNZ57_002714"
     CDS             complement(1223..3637)
                     /gene="gyrB"
                     /locus_tag="JNZ57_002714"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HAY8828884.1"
                     /translation="MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVV
                     DNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGG
                     KFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGET
                     EKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHY
                     EGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQR
                     DGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSS
                     QTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMT
                     RRKGALDLAGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKI
                     LNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHSIIIMTDADVDGSHIRT
                     LLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDEAMDQYQISIALDGATL
                     HTNASAPALAGEALEKLVSEYNATQKMINRMERRYPKAMLKELIYQPTLTEADLSDEQ
                     TVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNLFEPIVRVRTHGVDTDYPLDHEFI
                     TGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFEQALDWLVKESRRGLSIQRYK
                     GLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADLLFTTLMGDAVEPRRAFIEENALK
                     AANIDI"
     gene            complement(3666..4739)
                     /gene="recF"
                     /locus_tag="JNZ57_002715"
     CDS             complement(3666..4739)
                     /gene="recF"
                     /locus_tag="JNZ57_002715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HAY8828885.1"
                     /translation="MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIY
                     TLGHGRAFRSLQIGRVIRHEQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDG
                     HKVAELAHLMPMQLITPEGFTLLNGGPKYRRAFLDWACFHNEPGFFTAWSNLKRLLKQ
                     RNAALRQVTRYEQLRPWDKELIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFSLTF
                     SFQRGWEKETEYAEVLERNFERDRLLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKL
                     LMCALRLAQGEFLTRESGRRCLYLIDDFASELDDERRGLLASRLKATQSQVFVSAISA
                     EHVIDMSDENSKMFTVEKGKITD"
     gene            complement(4739..5839)
                     /gene="dnaN"
                     /locus_tag="JNZ57_002716"
     CDS             complement(4739..5839)
                     /gene="dnaN"
                     /locus_tag="JNZ57_002716"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006177590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HAY8828886.1"
                     /translation="MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSL
                     TGTDLEMEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSG
                     RSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLF
                     ETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQI
                     GSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNE
                     KFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCE
                     NVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL"
     gene            complement(5844..7247)
                     /gene="dnaA"
                     /locus_tag="JNZ57_002717"
     CDS             complement(5844..7247)
                     /gene="dnaA"
                     /locus_tag="JNZ57_002717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HAY8828887.1"
                     /translation="MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPN
                     RFVLDWVRDKYLNNINGLLTSFCGADAPQLRFEVGTKPVTQTPQAAVTSNVAAPAQVA
                     QTQPQRAAPSTRSGWDNVPAPAEPTYRSNVNVKHTFDNFVEGKSNQLARAAARQVADN
                     PGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNA
                     IEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEIN
                     GVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDILLPGEVAFFIAKRLRSNVR
                     ELEGALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVA
                     DLLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREE
                     SHDIKEDFSNLIRTLSS"
     gene            7544..7624
                     /locus_tag="JNZ57_002718"
     CDS             7544..7624
                     /locus_tag="JNZ57_002718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828888.1"
                     /translation="MTIDKNWLNRSNKDLGRSLRFTHQPV"
     gene            7854..7994
                     /gene="rpmH"
                     /locus_tag="JNZ57_002719"
     CDS             7854..7994
                     /gene="rpmH"
                     /locus_tag="JNZ57_002719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001686914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HAY8828889.1"
                     /translation="MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTV
                     SK"
     gene            8011..8370
                     /gene="rnpA"
                     /locus_tag="JNZ57_002720"
     CDS             8011..8370
                     /gene="rnpA"
                     /locus_tag="JNZ57_002720"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014172301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HAY8828890.1"
                     /translation="MVKLAFPRELRLLTPSQFTFVFQQPQRAGTPQITILGRLNSLGH
                     PRIGLTVAKKNVRRAHERNRIKRLTRESFRLRQHELPAMDFVVVAKKGVADLDNRALS
                     EALEKLWRRHCRLARGS"
     gene            8334..8591
                     /gene="yidD"
                     /locus_tag="JNZ57_002721"
     CDS             8334..8591
                     /gene="yidD"
                     /locus_tag="JNZ57_002721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HAY8828891.1"
                     /translation="MAPPLSPGSRVLIALIRVYQRLISPLLGPHCRFTPTCSSYGIEA
                     LRRFGVIKGSWLTVKRVLKCHPLHPGGDDPVPPGPFDTREH"
     gene            8594..10240
                     /gene="yidC"
                     /locus_tag="JNZ57_002722"
     CDS             8594..10240
                     /gene="yidC"
                     /locus_tag="JNZ57_002722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HAY8828892.1"
                     /translation="MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAA
                     GSAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLET
                     SPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNT
                     FTKTFVLKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTF
                     RGAAYSTPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYT
                     ANLGNGIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVAPHLDLTVDYGWLW
                     FISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKTQYTSMAKMRMLQPKIQA
                     MRERLGDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAP
                     FALWIHDLSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLW
                     FPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSREKKKS"
     gene            10346..11710
                     /gene="mnmE"
                     /locus_tag="JNZ57_002723"
     CDS             10346..11710
                     /gene="mnmE"
                     /locus_tag="JNZ57_002723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HAY8828893.1"
                     /translation="MSDNDTIVAQATPPGRGGVGILRISGFKAREVAETVLGKLPKPR
                     YADYLPFKDADGSVLDQGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPG
                     LRIARPGEFSERAFLNDKLDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLV
                     EALTHLRIYVEAAIDFPDEEIDFLSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMK
                     VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRE
                     ASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVR
                     NKADITGETLGMSEVNGHALIRLSARTGEGVDVLRNHLKQSMGFDTNMEGGFLARRRH
                     LQALEQAAEHLQQGKAQLLGAWAGELLAEELRLAQQNLSEITGEFTSDDLLGRIFSSF
                     CIGK"
     gene            11952..>11999
                     /gene="tnaC"
                     /locus_tag="JNZ57_002724"
     CDS             11952..>11999
                     /gene="tnaC"
                     /locus_tag="JNZ57_002724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophanase leader peptide"
                     /protein_id="HAY8828894.1"
                     /translation="MNILHICVTSKWFNID"
BASE COUNT         2765 a         3270 c         3103 g         2861 t
ORIGIN      
        1 gcccgggaat cggtgcaagt ataaaaaaca gcctgttgcg gtataagaat cgaccatgca
       61 gagagagaaa acaccggagt ggagggaaaa gcagaaaagc tcacgtggca taaggcgcgg
      121 acaggggtat cgcttagttt ttcaatttcc tatacgtgaa ccgacttcgc gagagagttt
      181 ttccaggaaa cgatagtcgt cataactgag agcagtttgc gccacggtgc taccatcagc
      241 ggccttctgt accagcgcgc cgttataagt aatgcagtag tcgcccggct gttccatatg
      301 cagctctttc aggtagttgt gaacgcctgc ataagggcga cccgtcgtta gcacgacatt
      361 cacgccacgg gcgcgagctg cggcaatcgc atttttaacg gcgggtgaaa tggtgtgatc
      421 gggcagcaga agggtgccat ccatatcgat agcaatgagt ttgatagcca tgagttcccc
      481 aggtagatta gttcctgacc catgctaacg cgattccgct caaaaatcag tacaacaccc
      541 gagggaaaag ggggatgcaa cgcgggttgc atgctcccca tttgcttagc ggaagagttt
      601 ccctttcagc agttccatac ctgcggaaag cagatcgtta ttggcttgtg aagacacttc
      661 accttgcggt gagagcgcat caataatctt cggcaattgt tctgccagta aactggaagc
      721 cgtactggta tccacgccaa gtttttgccc gagatcggac accgcatttg tgccgagcgc
      781 cgattccagt tgctcgccgc taactgattg attgctctgc tgattactca accaggttga
      841 gagaatggcc cctaagccgc cactttgcag tttttccagc agcacctgaa tgccgccctg
      901 ctcctcaacc caacttaaaa ttgcctgata tttccccgca tcgcctttca gaaaggcacc
      961 gacaacttca tcaaaaagcc ccatgataat cacctgtaaa gcgttacgtg ttgacccaaa
     1021 aagtatagat ctgcgggatg ataattgcgg attgcagaaa taaaaagggc ggagatgatc
     1081 tccgcccttt ttttatagct tcttgccgga tgcggcgtta acgtcttacc tggcctacaa
     1141 aatcattaaa attcaataca ttgaagattt tcgtaggcct gataagcgta gcgcatcagg
     1201 cacgctcgca tggttaacgc cattaaatat caatattcgc cgctttcagg gcgttctctt
     1261 caataaacgc acgacgcggt tctacggcgt cgcccatcag cgtggtgaac aacaggtcag
     1321 cggcaatcgc atccttaacg gtaacgcgca gcatacgacg actttccggg tccatggtgg
     1381 tttcccacag ctgttccggg ttcatctcgc ccagaccttt ataacgctgg atggagagac
     1441 cgcgacgaga ctctttcacc agccagtcca gcgcctgctc gaagctggct accggctgac
     1501 gacgctcgcc acgttcgata aatgcatctt cttccagcaa gccacgcagt ttctcaccca
     1561 gcgtgcagat acgacgatat tcgccaccag tgataaattc gtgatccagc ggatagtcag
     1621 tatccacacc gtgggtacgc acgcgaacaa tcggctcgaa caggttttgt tcggcattgg
     1681 tgtggacatc aaacttccac tggctgccgt gctgttcttt gtcgttcagt tcgctgacca
     1741 gcgcgttcac ccagcgggta acggtctgct catcagagag gtcggcttcc gtcagcgtcg
     1801 gctgatagat aagctctttc agcattgctt tcggataacg acgctccatg cggttgatca
     1861 ttttctgcgt cgcgttgtac tcagacacca gtttctctaa cgcttcgcca gccaatgccg
     1921 gtgcgctggc gttggtgtgc agcgttgcgc cgtccagcgc gatagagatc tggtactgat
     1981 ccatcgcttc gtcgtcttta atgtactgtt cctgcttgcc tttcttcact ttgtacagcg
     2041 gcggctgagc gatgtagacg tgaccgcgtt caacgatttc cggcatctga cgatagaaga
     2101 aggtcaacag cagcgtacga atgtgcgagc cgtcgacgtc cgcatcggtc atgatgatga
     2161 tgctgtgata acgcagtttg tccgggttgt actcgtcacg accgatacca cagccaagcg
     2221 cggtgataag cgtcgccact tcctgagaag agagcatctt atcgaagcgc gctttctcaa
     2281 cgttgaggat tttacccttc agcggcagaa tcgcctggtt cttgcggtta cgcccctgct
     2341 tcgcagagcc gcccgcggag tccccttcca ccaggtacag ttcggaaagc gccggatcgc
     2401 gttcctggca gtctgccagt ttgcccggca ggcccgctaa gtcgagcgca cctttacggc
     2461 gggtcatttc acgcgcgcga cgcgccgctt cacgggcacg ggcagcatcg ataattttgc
     2521 caaccacgat tttcgcgtcg gttgggtttt ccagcaggta ttctgccagc agttcgttca
     2581 tctgctgttc aaccgccgat ttcacctcag aagaaaccag tttgtctttg gtctgggagg
     2641 agaatttcgg gtccggcact tttacggaaa cgaccgcaat caggccttca cgcgcatcgt
     2701 caccagtggc gctgactttg gcttttttgc tgtagccttc tttgtccatg taggcgttca
     2761 gggtacgggt catcgccgca cggaagcctg ccaggtgagt accgccgtca cgctgcggaa
     2821 tgttgttggt aaagcagtag atgttttcct ggaagccatc gttccactgc aacgccactt
     2881 cgacgccaat accgtctttt tcggtggaga agtagaagat attcggatgg atcggcgttt
     2941 tgttcttgtt cagatattca acgaacgcct tgatgccgcc ttcatagtgg aagtggtctt
     3001 ctttgccgtc acgcttgtcg cgcagacgaa tggaaacgcc ggagttgagg aacgacaact
     3061 cacgcagacg tttcgccaga atttcatatt cgaactcggt cacattggtg aaggtttcga
     3121 ggctgggcca gaaacgcacc atggtgccgg ttttttcagt ctcgccggta accgccagcg
     3181 gagcctgcgg tacaccgtgt tcgtagatct gacggtgaat tttaccctcg cgctggataa
     3241 ccagctccag tttttgcgac agggcgttta ctaccgaaac accaacgccg tgcagaccgc
     3301 cggacacttt ataggagtta tcgtcaaatt taccgcctgc gtgcagaacg gtcatgatca
     3361 cttccgccgc cgatacgccc tcttccgggt gaataccggt cggaatgcca cgcccgtcat
     3421 cctgtacaga gacagagtta tcggcgtgaa tggtgacgat aatttcttta cagtgacccg
     3481 cgagcgcttc gtcgatagcg ttatctacca cctcgaatac catgtggtgc agaccggtgc
     3541 cgtcatccgt gtcgccgata tacatacccg ggcgcttacg caccgcatcc agccctttca
     3601 ggactttgat actggaggag tcataagaat tcgacatcaa cgtttctcgc tcatttatac
     3661 ttgggttaat ccgttatttt acccttttcc acggtaaaca tcttcgaatt ttcgtccgac
     3721 atgtctataa cgtgttcagc actgatcgcg ctgacaaaga cctgtgattg cgtcgctttt
     3781 aagcggctgg caagcagccc gcgacgctca tcatcaagct cagaggcaaa atcatctatc
     3841 aggtagagac accgccgccc gctttcacgg gtgaggaact ctccttgcgc cagacgtaag
     3901 gcgcacatca acagcttaag ctgcccacgc gataaggtat cttccaccgg cgcaccgtcg
     3961 gcgcgaatgc gtaagtccgc tttatgcggg ccatgcgcgg tgtaggttag caggcgatcg
     4021 cgttcaaaat tacgttccag cacctcagca tattctgtct ctttctccca gccgcgctgg
     4081 aaagagaaag tcagagaaaa ctcagggaga aattgcttac aagtatcggc catatcagcc
     4141 gcgataccgg cgctatactc cgcgcgccag gtgctgattt gctccgccag cgggatcagc
     4201 tctttatccc acgggcgtag ctgttcgtaa cgtgtcacct ggcgcagcgc cgcattgcgc
     4261 tgcttgagca atcgcttgag attgctccag gcggtgaaaa atccgggttc gttgtgaaag
     4321 catgcccagt cgagaaatgc tcttctgtat ttggggccgc cgttgagtaa agtaaaccct
     4381 tctggcgtta tcagctgcat cggcatcagg tgcgccagct ccgcgacttt atgcccgtca
     4441 gtaccgtcga tgcggacttt gctgtcgcct tgtttgtctt tggttaagcc aatcgccgtc
     4501 tcgcgctctt cgccctgtaa tcgcccatgg agaacaaatg cctcctgctc atggcgaatg
     4561 acgcgaccaa tctgcaaact gcgaaacgcc cgaccatggc cgagcgtata gatggcttcc
     4621 agcacgctgg ttttgccact gccgttggca cctaccagaa agttaaagcc gggagataag
     4681 gcgagatccg cggtttcgat attgcggaaa tcgcggatca acaagcgggt gagggacatt
     4741 acagtctcat tggcatgaca acataagccg cgctctggct ggccgcatct tcaatctgca
     4801 cgctggaaac cgaatcggtc agcatcatgc ggacgttttc gcatttcagc gcgttcagaa
     4861 catccagcac atagctgacg ttgaagccga tttccatctc cgcaccgcta taggtaacgt
     4921 cgaggatctc ttccgcttct tcctgttccg ggttgttggc agtgattttc agctggtttt
     4981 cgctgacata aagacgtacg ccgcggaatt tctcgttaga gagaattgcc gcacgggcaa
     5041 acgcctgctt gagcagatcg cagccagctt ccagatgttt gtccgggttc ttcggtagaa
     5101 cgcggcggta atccgggaag cgaccatcca ccagtttgga ggtgaagata aagtcgccaa
     5161 cgtgggcacg aatgttattg ctgccaatct gcacgcgcag cggattgtcg ccgccgtcga
     5221 gcatacgcat cagttcaatc acgcctttac gcggcacgat caccgaatgg cttggcaaag
     5281 attgaccaat tggcattgaa cagactgcca gacggtgacc atcggtcgct acggtgcgca
     5341 gttcttcgcc ttcggtttca aacagcatac cgtttaagta atagcgaaca tcctgatgcg
     5401 ccatcgaaaa ctgggtcgct tcaatcagac gcttcatcgt cgcctgcggc agggtaaatt
     5461 cgacttcgct ctgccagtca tcgaggttcg ggaaatccgc cgctggcagg gtagacagcg
     5521 aaaaacggct acgcccggag cgcaccagca tccgttcacc ttccagctgc acggcaattt
     5581 ccgcgccttc aggcagacca cggcagatat caaagaattt gcgcgccgga acggtcgttg
     5641 ctcctggctc gtgtggctga accagcgcaa cacgtgccac catttccatc tcgagatcag
     5701 taccggtcag cgacaacgta ccgtcagcaa cctgtaacag cagattaccg agaatcggta
     5761 gcgtaggacg accacctaac ggaccgctca cctgttgtag cggttttaat aaatgctcac
     5821 gttctacggt aaatttcata ggtttacgat gacaatgttc tgattaaatt tgaaaaatct
     5881 tctttgatat cgtggctctc ttcacgcaac tgctcgatct tacggcaggc atgaagcacc
     5941 gtcgtgtggt cacgaccacc aaacgcatcg ccaatctccg gcagactgtg gttagtcagc
     6001 tctttcgcca gcgccatcgc catctggcgc ggacgcgcca ccgagcggga tcgacgcttg
     6061 gaaaggagat ccgcgacttt gatcttgtag tactccgcca ccgtcttctg aatattgtcg
     6121 atggtgacca gtttttcctg caatgccagc aagtcgcgca gcgcctcacg cacgaagtcg
     6181 atggtgatcg cccgtccggt aaagttggca ttggcaatga cgcggttcag cgccccttcc
     6241 agctcacgta cgttagatcg tagacgcttg gcgataaaga acgccacttc gcccggcaaa
     6301 agaatgtcgt tttcgtcggc ctttttcatc aggatcgcca cacgggtttc cagctctggc
     6361 ggttcgatcg ccacagtcag tccccaaccg aagcgggatt tcaaacgatc ctcaacgccg
     6421 ttgatctctt tcggatagcg atccgaggtg agaatgatct gttgattacc ttccagcagg
     6481 gcgttgaagg tatggaaaaa ctcttcctga gatcgttctt tattagcaaa aaactgaata
     6541 tcgtcgatca gcagtgcatc tacggaacgg tagtagcgtt taaactcttc gatcgcgttg
     6601 ttttgcaggg ctttaaccat gtcctgaaca aagcgctcgg agtgcatata aaccactttg
     6661 gcattcggct tgcgcgccat aatgccgtta cccaccgcat gcagcaggtg agttttaccc
     6721 agacccgtgc cgccataaag gaacaacggg ttataggcac cgccagggtt atccgccacc
     6781 tggcgagccg ccgcgcgcgc cagttggtta gatttacctt caacgaagtt atcaaacgtg
     6841 tgtttgacgt ttacgttaga acgataggtc ggttctgccg gggccgggac gttatcccaa
     6901 cctgagcgcg tagaaggcgc agcacgttgc ggctgcgttt gcgccacctg tgcaggggcc
     6961 gcgacgttgc tcgtcactgc cgcttgtggc gtttgcgtca ccggtttggt gccgacttca
     7021 aaacgcagct gtggggcatc cgctccgcag aaactggtta gcagtccatt gatattatta
     7081 aggtacttgt cccgtaccca atcgaggaca aaacggtttg gcgcgtacag ggccagcgtg
     7141 ttatcgctca gttccgcctg caatgggcgt atccacatac tgaattctgt ggctggtaac
     7201 tcatcctgca atcgggcaag acactgctgc caaagcgaaa gtgacacggc ggactccact
     7261 cgaacaaaag tcgataatga ctaaggctga aacattcatg attgttgacg tacgtcgaaa
     7321 agaccctgct tgagggtgac gcacgaaccg ctgtctgcgg ttatatgccc gatcaagatc
     7381 ctgcaaaacg atcgggaccg cggatcatag cctaaactgc gcaagagatc ttctgtttct
     7441 cacagatttt cccgatttat ccacaggact ttccagaact cgctaagtgt aaacgatcct
     7501 gccgcgaggc gggcatgatt tacgccgcat attgaaaaat ttaatgacca tagacaaaaa
     7561 ttggcttaat cgatctaata aagatctagg acgatccttg cgctttaccc atcagcccgt
     7621 ataatcctcc acccggcgcg ccatgctggt ttccactggt gtgaggtcgt acattttccc
     7681 tgcgaaaagg tgcggaaaag cgcggtaaat aaggaaagag aattgactcc ggagtgtaca
     7741 attattacaa tccggcctct ttaatcaccc atggcttcgg tgtccatcgt ttcatttttc
     7801 ggcggatatc caataaagcc attgaattta ttcaagttta ggtagaaatc gccatgaaac
     7861 gcacttttca accgtctgta ctgaagcgca accgttctca cggcttccgc gctcgtatgg
     7921 ctactaaaaa tggtcgtcag gttctggcac gtcgtcgtgc taaaggccga gctcgtctga
     7981 ccgtttctaa gtaataaagc taacccctga gtggttaagc tcgcatttcc aagggagtta
     8041 cgcttgttaa ctcccagtca attcacattc gtcttccagc agccacaacg ggctggcacg
     8101 ccgcaaatta ccattctcgg ccgcctgaat tcgctggggc atccccgtat cggtcttaca
     8161 gtcgccaaga aaaacgttcg acgcgcccat gaacgcaatc ggattaaacg tctgacgcgt
     8221 gaaagcttcc gtctgcgcca acatgaactc ccggctatgg atttcgtggt ggtggcgaaa
     8281 aaaggggttg ccgacctcga taaccgtgct ctctcggaag cgttggaaaa attatggcgc
     8341 cgccactgtc gcctggctcg cgggtcctga tagccctcat tcgggtctat caacgcctga
     8401 ttagtccgct actcgggccg cattgtcgtt tcactccaac ctgttcaagc tacggaattg
     8461 aggcattgcg caggtttgga gtgataaaag gcagttggtt gacggtgaaa cgcgtattaa
     8521 aatgccaccc tttacaccct ggtggtgacg atcccgtccc gcccggacca tttgatacca
     8581 gagaacacta acgatggatt cgcaacgcaa tcttttagtc atcgctttgc tgttcgtgtc
     8641 tttcatgatc tggcaagcct gggagcagga taaaaacccg caacctcagg cccaacagac
     8701 cacgcagaca acgaccaccg cagcgggtag cgccgccgac cagggcgtac cggccagtgg
     8761 ccaggggaaa ctgatctcgg ttaagaccga cgtgcttgat ctgaccatca acacccgtgg
     8821 tggtgatgtt gagcaagctc tgctgcctgc ttacccgaaa gagctgaact ctacccagcc
     8881 gttccagctg ctggaaactt caccgcagtt tatttatcag gcacagagcg gtctgaccgg
     8941 tcgtgatggc ccggataacc cggctaacgg cccgcgtccg ctgtataacg ttgaaaaaga
     9001 cgcttatgtg ctggctgaag gtcaaaacga actgcaggtg ccgatgacgt ataccgacgc
     9061 ggcaggcaac acgtttacca aaacgtttgt cctgaaacgt ggtgattacg ctgtcaacgt
     9121 caactacaac gtgcagaacg ctggcgagaa accgctggaa atctccacct ttggtcagtt
     9181 gaagcaatcc atcactctgc caccgcatct cgataccgga agcagcaact tcgcactgca
     9241 caccttccgc ggcgcggcgt actccacgcc tgacgagaag tacgagaaat acaagttcga
     9301 taccattgcc gataacgaaa acctgaacat ctcttcgaaa ggtggttggg tggcaatgct
     9361 gcaacagtat ttcgcgacgg cgtggatccc gcataacgat ggtaccaaca acttctatac
     9421 cgctaatctg ggtaacggca tcgccgctat cggctataaa tctcagccgg tactggttca
     9481 gcctggtcag actggcgcga tgaacagcac cctgtgggtt ggcccggaaa tccaggacaa
     9541 aatggcagct gttgctccgc acctggatct gaccgttgat tacggttggt tgtggttcat
     9601 ctctcagccg ctgttcaaac tgctgaaatg gatccatagc tttgtgggta actggggctt
     9661 ctccattatc atcatcacct ttatcgttcg tggcatcatg taccctctga ccaaaacgca
     9721 gtacacctcc atggcgaaga tgcgtatgct gcagccgaag attcaggcaa tgcgtgagcg
     9781 tctgggcgat gacaaacagc gtatcagcca ggaaatgatg gcgctgtaca aagctgagaa
     9841 ggttaacccg ctgggcggct gcttcccgct gctgatccag atgccaatct tcctggcgtt
     9901 gtactacatg ctgatgggtt ccgttgaact gcgtcaggca ccgtttgcac tgtggatcca
     9961 cgacctgtca gcacaggacc cgtactacat cctgccgatc ctgatgggcg taacgatgtt
    10021 cttcattcag aagatgtcgc cgaccacagt gaccgacccg atgcagcaga agatcatgac
    10081 ctttatgccg gtcatcttca ccgtgttctt cctgtggttc ccgtcaggtc tggtgctgta
    10141 ctatatcgtc agcaacctgg taaccattat tcagcagcag ctgatttacc gtggtctgga
    10201 aaaacgtggc ctgcatagcc gcgagaagaa aaaatcctga ttcggtgagt tttcgctaaa
    10261 ataagggcgg tcagttgacc gccttttttc ttttcgtagg gcggataagc accgcgcatc
    10321 cgccacacaa agcaacagga acatcatgag cgataatgac actatcgtag cccaggccac
    10381 gcctccggga cgtggcggcg ttggcatcct gcgcatctcc ggcttcaaag cccgtgaagt
    10441 tgccgaaacc gtgctgggta aactgcctaa gccgcgctac gccgattatc ttccgtttaa
    10501 agacgccgac ggcagcgtgc tcgatcaggg gattgcgcta tggttccctg gcccgaactc
    10561 gttcactggc gaagatgtgc tggaactgca aggtcatggc ggtccggtga tcctcgacct
    10621 gctgttaaaa cgcattctga ccattcccgg cctgcggatt gctcgccctg gtgagttttc
    10681 cgaacgcgcg tttcttaacg ataaacttga cttagcccag gccgaggcga ttgccgatct
    10741 tatcgacgcc agttcggaac aggcggcccg ttcggcactt aactcgctgc aaggcgcatt
    10801 ctccgcacgg gttaatcatc tggtagaagc cctcacccac ttgcgcattt acgtcgaagc
    10861 ggcaattgat ttccccgatg aagagatcga tttcctctcc gacggaaaaa ttgaagccca
    10921 gctcaatgac gttattgccg atcttgatgc agtgcgtgct gaagcacgtc agggtagttt
    10981 gttgcgcgaa gggatgaaag tggtgattgc cggacgtcct aacgccggta aatcgagcct
    11041 gttaaacgcg ctggcggggc gtgaagcggc aatcgtaacc gatatcgccg gaactacgcg
    11101 tgacgtgctg cgtgagcata tccacattga cggaatgccg ctgcatatca tcgataccgc
    11161 cgggctacgt gaagccagtg acgaagtaga acgtattggt atcgagcgcg cgtggcagga
    11221 aattgaacag gccgaccgcg tgctgtttat ggtcgatggc accacaacag acgccgtgga
    11281 tccggcagag atctggccgg aatttattgc ccgtctgcca gcgaaactgc cgatcaccgt
    11341 ggtgcgcaat aaagccgata tcaccggcga aacgctggga atgagtgaag tgaacggtca
    11401 cgcgttaatt cgtctctcag caaggactgg tgaaggcgtg gacgtgctgc gtaaccatct
    11461 caaacagagc atgggctttg acaccaacat ggaaggcggc ttcctggcgc gtcgtcgcca
    11521 cctacaggcg ctggaacagg cagcggaaca tctacaacag ggcaaagcgc aactgttggg
    11581 agcctgggca ggtgaactgc tggcggaaga gttgcgtctg gcacagcaga acttaagcga
    11641 aatcaccggg gaatttactt cagacgacct gctggggcgg attttctcca gcttctgtat
    11701 tggtaagtaa ccgcgcttac gaagccgtat tctgactgtc agatgcggct tcgcttcatt
    11761 gttagcactc ctgttattcc tcaacccttt ttttaaacat taaaattctt acgtaattta
    11821 taatcttaaa aaaagcattt aatattgctc cccgaacgat tgtgattcga ttcacattta
    11881 aacaatttta gaatagacaa aattcttgag tattatactg tagcctcgtg tctttcgagg
    11941 ataagtgcat tatgaatatc ttacatatat gtgtgacctc aaaatggttc aatatcgac
//
LOCUS       DADMHC010000121        11964 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.121, whole genome shotgun sequence.
ACCESSION   DADMHC010000121 DADMHC010000000
VERSION     DADMHC010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11964)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11964)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11964
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.121"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            16..192
                     /locus_tag="JNZ57_002725"
     CDS             16..192
                     /locus_tag="JNZ57_002725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001322497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HAY8828895.1"
                     /translation="MSALFFFNAVCIVSDNLLIIESFGEMAYNISYLTRVPGTNTLLA
                     CCCLLRPEEVNSEY"
     gene            182..355
                     /locus_tag="JNZ57_002726"
     CDS             182..355
                     /locus_tag="JNZ57_002726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module toxin, GnsA/GnsB family"
                     /protein_id="HAY8828896.1"
                     /translation="MNIEELKKQAETEIADFIAQKIAELNKNTGKEVSEIRFTAREKM
                     TGLESYDVKIKIM"
     gene            complement(404..1477)
                     /locus_tag="JNZ57_002727"
     CDS             complement(404..1477)
                     /locus_tag="JNZ57_002727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HAY8828897.1"
                     /translation="MAEKKRTRWQRRPGTTGGKLPWNDWRNATTWRKATQLLLLAMNI
                     YIAITFWYWVRYYETASSTTFVARPGGIEGWLPIAGLMNLKYSLTTGQLPSVHAAAML
                     LLVAFIVISLLLKKAFCSWLCPVGTLSELIGDLGNKLFGRQCVLPRWLDIPLRGVKYL
                     LLSFFLYIALLMPAQAIHYFMLSPYSVVMDVKMLDFFRHMGTATLISVTVLLIASLFI
                     RHAWCRYLCPYGALMGVVSLLSPFKIRRNAESCIGCGKCAKNCPSRIPVDKLIQVRTV
                     ECTGCMTCVESCPVASTLTFSLQKPAANKKAFALSGWLMTLLVLGIMFAVIGYAMYAG
                     VWQSPVPEELYRRLIPQAPMIGH"
     gene            complement(1549..4293)
                     /gene="torS"
                     /locus_tag="JNZ57_002728"
     CDS             complement(1549..4293)
                     /gene="torS"
                     /locus_tag="JNZ57_002728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415513.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMAO reductase system sensor histidine
                     kinase/response regulator TorS"
                     /protein_id="HAY8828898.1"
                     /translation="MNLTLTQRLWMGFALMALLTLTSTLVGWYNLRFISQVEKDNTQA
                     LIPTMNMARQLSEASAWELFAAQNLTSADNEKMWQAQGRMLTAQSLKINALLQALREQ
                     GFDTTAIEQQEQEISRSLRQQGELVGRRLQLRQQQQQLSQQIVAAADEIARLAQGQAN
                     NATTSAGATQAGIYDLIEQDQRQAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVM
                     NLGLEQIQKNAPTLEKQLNNAVKILQRRQIRIEDPGVRAQVATTLTTVSQYSDLLALY
                     QQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDTIELRNQHGLAHLEKASARGQYSLL
                     LLGMVSLCALILILWRVVYRSVTRPLAEQTQALQRLLDGDIDSPFPETAGVRELDTIG
                     RLMDAFRSTVHALNRHREQLAAQVKARTAELQELVIEHRQARAEAEKASQAKSAFLAA
                     MSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGESLLTILNDILDYSAIEAG
                     GKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATAIADDVPTALMGDPRRIRQVI
                     TNLLSNALRFTDEGQIVLRSRTDGEQWLVEVEDSGCGIDPAKLAEIFQPFVQVSGKRG
                     GTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPLRVATAPVPKTVNQAVRLDGL
                     RLLLIEDNPLTQRITVEMLNTSGAQIVAVGNAAQALETLQNSEPFAAALVDFDLPDVD
                     GITLARQLAQQYPSLVLIGFSAHVIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYL
                     QLQVNNDQSLDVSQLNEDAQLMGTEKIHEWLVLFTQHALPLLDEIDIARASQDSEKIK
                     RAAHQLKSSCSSLGMRIASQLCAQLEQQPLSAPLPHEEITRSVAALEAWLHKKDLNAI
                     "
     gene            4376..5326
                     /gene="torT"
                     /locus_tag="JNZ57_002729"
                     /pseudo
     CDS             4376..5326
                     /gene="torT"
                     /locus_tag="JNZ57_002729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706917.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TMAO reductase system periplasmic protein TorT"
     gene            complement(5299..5991)
                     /gene="torR"
                     /locus_tag="JNZ57_002730"
     CDS             complement(5299..5991)
                     /gene="torR"
                     /locus_tag="JNZ57_002730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator TorR"
                     /protein_id="HAY8828899.1"
                     /translation="MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQN
                     QPVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTK
                     PLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTR
                     AEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQ
                     HGEGYFLAADVC"
     gene            6121..7279
                     /gene="torC"
                     /locus_tag="JNZ57_002731"
                     /pseudo
     CDS             6121..7279
                     /gene="torC"
                     /locus_tag="JNZ57_002731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309178.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pentaheme c-type cytochrome TorC"
     gene            7279..9875
                     /gene="torA"
                     /locus_tag="JNZ57_002732"
                     /pseudo
     CDS             7279..9875
                     /gene="torA"
                     /locus_tag="JNZ57_002732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415517.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine-N-oxide reductase TorA"
     gene            9872..10471
                     /gene="torD"
                     /locus_tag="JNZ57_002733"
     CDS             9872..10471
                     /gene="torD"
                     /locus_tag="JNZ57_002733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD"
                     /protein_id="HAY8828900.1"
                     /translation="MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLL
                     KSEPPLAAAVNELENCIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQ
                     EIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTA
                     LWQWLPEFAARCHQYDSFGFYAALSQLLLVLVECDHQNK"
     gene            complement(10564..10869)
                     /gene="cbpM"
                     /locus_tag="JNZ57_002734"
     CDS             complement(10564..10869)
                     /gene="cbpM"
                     /locus_tag="JNZ57_002734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone modulator CbpM"
                     /protein_id="HAY8828901.1"
                     /translation="MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWV
                     FDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP"
     gene            complement(10869..11789)
                     /gene="cbpA"
                     /locus_tag="JNZ57_002735"
     CDS             complement(10869..11789)
                     /gene="cbpA"
                     /locus_tag="JNZ57_002735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curved DNA-binding protein"
                     /protein_id="HAY8828902.1"
                     /translation="MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEA
                     RFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIF
                     GQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTL
                     NVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVS
                     PWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMP
                     PKPDENTAALWQQLADAQSSFDPRKDWGKA"
BASE COUNT         2859 a         3081 c         3173 g         2851 t
ORIGIN      
        1 cgtggagcct tttttatatc tgccttattt ttcttcaacg ctgtatgtat agtaagcgat
       61 aacctgttga ttattgaatc tttcggggag atggcttata acatttctta cctgactagg
      121 gtaccgggaa ccaacacctt actggcgtgt tgctgtcttt taagaccaga agaggttaac
      181 agtgaatatt gaagagttaa aaaaacaagc cgaaacggaa atcgccgact ttatcgcgca
      241 aaaaatcgcc gagctgaaca agaatacagg gaaagaagtc tctgaaattc gcttcaccgc
      301 acgagaaaaa atgaccgggc ttgaaagtta tgatgtcaaa atcaaaataa tgtgattttg
      361 tgaacatcac cccgtgcgag gtgatgttcc gcttgttgct aatttagtga ccaatcattg
      421 gcgcttgtgg aattaagcgt cggtacaatt cctccggcac cgggctttgc catactcccg
      481 catacattgc gtaaccaatc accgcgaaca taatccccag aaccagtagc gtcattaacc
      541 agccagacaa cgcaaaagct tttttatttg ccgcaggttt ttgcagtgaa aaggtcaatg
      601 ttgaggctac cggacatgac tctacgcaag tcatacagcc ggtacattcc actgttcgta
      661 cctgaattaa tttatctacc gggatccgtg atgggcaatt ttttgcgcat ttgccacagc
      721 cgatacaact ttcggcattg cgacgaatct taaacggcga taatagcgaa accacgccca
      781 tcagcgcgcc atatgggcaa agataacgac accaggcatg gcgaataaac aggctggcaa
      841 tcagcaaaac ggtcacgctg attaatgtcg cggtccccat atgacgaaag aaatcgagca
      901 tttttacgtc catcaccacg ctgtagggcg acaacataaa atagtgaatc gcctgagcgg
      961 gcatcaataa cgcgatatag agaaaaaaac tcaacagcaa atacttcacg ccgcgcagag
     1021 gaatatccag ccagcgggga aggacacatt gccgaccaaa cagtttgtta ccgagatcgc
     1081 cgattaattc agaaagcgta ccaaccgggc ataaccatga gcaaaaggcc tttttgagta
     1141 atagactgat gacgataaaa gcgaccaata acagcatcgc ggcggcgtgg acggacggta
     1201 actgacctgt tgtaaggcta tatttcagat tcatcagacc ggcaatcggt agccagcctt
     1261 cgatacctcc cggtctggcg acaaatgtcg tgctacttgc cgtttcgtaa tagcgcaccc
     1321 aataccagaa cgtgatggca atataaatat tcattgccaa cagtaataat tgcgtcgctt
     1381 tacgccaggt cgtggcattg cgccagtcat tccacggtaa tttgccgccc gtcgtgcctg
     1441 gccgccgctg ccagcgggtt ctttttttct ctgccatgat tttgccagtc cgttaagttg
     1501 cataccaaat gccactattc tagttgttct taactggctg atattgattc aaatcgcgtt
     1561 caggtctttc ttatgcaacc atgcttccag agcggcaaca ctgcgtgtaa tttcttcgtg
     1621 tggaaggggg gcagataatg gctgctgctc cagttgtgcg catagctggc tggcgatacg
     1681 cattcccaaa ctcgagcaac tgctttttag ctgatgcgcg gcacgcttta ttttctcgct
     1741 atcctgactg gcgcgggcaa tgtcgatttc atcgagaagc ggcagggcat gttgtgtaaa
     1801 taataccagc cattcgtgga tcttctccgt ccccattaac tgagcatctt cattgagttg
     1861 cgatacatcc agcgattgat cgttattgac ttgcagttgg agatagtgcg ccagtaactg
     1921 accgagcact tcacgcggca ccggtttagg gataatcccg cggaataatg aactggtacg
     1981 ctggcgcagc gtttcgtcaa tgacatgggc gctaaagcca atcaaaacca gcgacggata
     2041 ttgctgtgcc agttgtcggg caagcgtaat gccgtcgaca tccggcagat caaaatccac
     2101 cagtgcggca gcaaacggtt cgctattttg cagtgtctct aaagcctgcg cggcattgcc
     2161 aacagcaaca atctgcgcac cactggtgtt cagcatctca acggtaattc gctgggttag
     2221 cgggttatct tcaattaaca gcaaacgtaa accgtcaaga cgcaccgcct gattgactgt
     2281 ttttggcacg ggtgccgtgg caacacgtaa cggcaagcgt aaacaaaaac agcttccaac
     2341 ctccggcgtg ctggtggcgc tcagttcgcc gcccatcgcc tgggccagac ggctactgat
     2401 agtcagtccc agcccggtgc cgccgcgttt gccgcttacc tgcacaaatg gctggaagat
     2461 ttctgccagt ttcgcgggat caataccgca gccgctgtct tccacttcga ccagccattg
     2521 ctcgccatca gtgcggctac gtaaaacgat ctgcccttcg tcagtaaaac gcagggcgtt
     2581 gctcaacagg ttggttataa cctgacgaat acgtcgcgga tcgcccatta acgcggtcgg
     2641 tacatcgtcg gcaattgctg ttgccaggcg aatcgggcga cctttcaccc gtccgctcat
     2701 taattgcagg gtactttcca gcagcgggcg cggttcaaag ggctcatcgc tgaccgaaac
     2761 attcttgcca cctgcttcga tagccgaata atcgagaata tcgttgagga tggtcagcaa
     2821 cgattcgcca gagtcggtaa tcgcccgcaa atcatcacgc tgggcgttaa gtgcggggtt
     2881 atctgccagc agttgagcag tgccgagaat accgtacagc ggtgtgcgga tctcatggct
     2941 catcgccgcc agaaaggccg attttgcctg gctggctttt tctgcttccg cccgtgcctg
     3001 tcggtgttct atcaccagtt cctgcaattc agctgtacgc gctttgacct gcgccgccag
     3061 ctgttcacgg tggcgattca gtgcatgaac agtgctgcga aacgcatcca tcagccgccc
     3121 gatggtatcc agctcccgta cgccagcggt ttccgggaaa ggggagtcaa tatcaccgtc
     3181 cagcagccgt tgcagcgcct gcgtttgttc ggcaagtgga cgcgtgactg agcgataaac
     3241 cacgcgccaa aggatcagaa tcagtgcgca aagtgaaacc atccccagca ataacaggct
     3301 gtattgcccg cgtgcactgg ctttttccag atgcgccagt ccgtgctgat tacgcagctc
     3361 aatggtgtcg accagctgac tgacttcgct actaaactgc gcgaactggg cgatgttatt
     3421 ttgtgcgaga gtttgtaggt gattgctgat ttcactgtcc tgctgataca gcgccagcaa
     3481 atcgctatat tggctaacgg tagttaacgt tgttgcgacc tgcgcacgaa cacccggatc
     3541 ttcaatgcgt atttgccgac gttgcagaat tttcaccgca ttattgagct gcttttccag
     3601 cgttggtgca tttttctgga tctgctccag ccccagattc atcaccattt gctgcacccg
     3661 cagagcgcta aggcgcagtt cattcatctg gttaacatac tcaagatcga tatcaatcag
     3721 ccgatcgagt gcactttcag cagcctgacg ctgatcttgt tcgatcaaat cgtaaatccc
     3781 ggcctgggtc gctccagcgg aagttgtcgc attattcgcc tgaccttgcg ccaggcgtgc
     3841 gatctcatcg gcggcagcga ctatctgctg actgagttgc tgttgttgct ggcgtagttg
     3901 cagacgccgc cccaccagtt ccccttgctg acgtaacgaa cgggagatct cctgctcctg
     3961 ttgttcaata gcggtggtat caaaaccttg ttcccgtaac gcttgcagca acgcattaat
     4021 cttcaggctt tgtgcggtga gcattcgccc ctgcgcctgc cacatctttt cgttatcggc
     4081 actggtcagg ttctgcgcgg cgaaaagttc ccaggcgctg gcttcgctca actggcgcgc
     4141 catattcatg gtaggaatca atgcctgagt gttgtctttt tccacctggc tgataaagcg
     4201 caggttgtac catcccacca gggtactggt tagggttaac agcgccatca gggcaaagcc
     4261 catccagagt ctttgggtca gggttaaatt cacggtcggt gcactttagg tgaaaaaggt
     4321 tgagtcgcaa agcagaatgc atctagcata aagccttatt attgatgagg ctatcatgcg
     4381 cgtactgcta tttttacttc tttccctttt catgttatcg gcattttcgg gtgataacct
     4441 gttgcgctgg catgatgcgc agcattacac ggtgcaagcc tctacgccgc ttaaagccaa
     4501 acgcgcatgg aaactgtgcg cgctttatcc cagcctgaaa gattcatact ggttatcgtt
     4561 gaactatggt atgcaggagg caggcggcta cagccagttg gctactcagc aagcacaaat
     4621 cgaccagtgt aaacagtggg gcgcagaggc cattttgctc ggtagtagca ctacgtcatt
     4681 tcccgacctg caaaagcagg tagcaaatct gccggtgatc gaactggtaa atgctcttga
     4741 tgatcccctg gtgaaaagcc gcgttggtgt accctggttt cagatgggct atcaacctgg
     4801 gcgatatttg gtgtaatggg cgcacggtaa accactgaac gtgctgttga tgcccggacc
     4861 cgataatgcc gggggcagta aagagatggt cgagggtttt cgcgcagcca ttgccggaag
     4921 cccggtgcgt attgttgata ttgcgcttgg tgataacgat attgaaatcc agcgtaacct
     4981 gttgcaggag atgctggaac gccacccaga aatcgacgtc gttgccggaa cggccattgc
     5041 ggcagaggcg gcaatgggtg aagggcgtaa cctgaaaacg ccgcttaccg tggtgtcgtt
     5101 ttatctttca catcaggtgt atcgcgggct gaagcgggga agagtgatta tggctgccag
     5161 cgatcaaatg gtctggcagg ggcaatcggt gtctgataat gtcagcccac cgattttagt
     5221 tctgacgccg aaaaatgccg accgtgaaca tattcgccgc tcgctgtcac cagggggatt
     5281 tcgtccggtc tatttttatc agcacacatc agcggctaag aaataacctt caccatgttg
     5341 cgtcaccagt aaatccgcgc tgagtttatg acgtaaacga cgaattaaca catcgacggt
     5401 gcgcaggtca gggttttcca cccgacgcgc agaaagcata cgtagcagac gttcacggct
     5461 gagaatttcg cccggattcg tcacaaatgc caccaacatt tcatactctg cgcgggtcag
     5521 tttaatcggc tcgccatccc gctccagcgt atggcgcgac acattcaggc aataaccggc
     5581 aaagcgatag cagttgtcct gagtgtgcgg ttgagcttgt cgcgcgaggt cgattcgcca
     5641 gagcagattt ttcacccgta ctaccagttc gcgcagttcc agcggtttgg tgacgtaatc
     5701 gtctgcgccc atttccagcc caacaatacg gtcaatccga tcgctgcgtc cggtaaccag
     5761 aataatcccc accgttgagc gttctcgcag ggcgcgggtt aacatcaggc cattttcatc
     5821 gggtaagttg atatccagca gaattaaatc taccggctga ttctgcataa tttcccgcag
     5881 cccggcaccg ctcgctgtaa cggaaacggt atacccctcc tgagtgaagt aagattgtaa
     5941 tcgcgcctgg gtaaccggct catcttcaac aataacaatg tgatgtggca tcagagggtt
     6001 ttactcattc tgttcatatc tgttcatatt ctgccgtaag ccgttcatcc tgaccagtgc
     6061 cgctgttcat atttgctcat taagatcgct tcactaaacc ataattttac agcggctatt
     6121 atgcggaaac tctggaacgc gctacgccga cccagtgctc gttggtcggt actggcgctg
     6181 gtcgcaattg ggattgtgat tggcattgcg ctgattgtat tgccacacgt tgggatcaaa
     6241 gtcaccagca caaccgaatt ttgtgtcagt tgccacagta tgcaaccggt gtatgaagaa
     6301 tataaacagt cggtgcattt ccagaacgcc tccggcgtgc gagctgaatg ccatgccgga
     6361 tattccaggc atggtgaagc gcaaactgga agcgagcaat gatatctacc agacctttat
     6421 tgctcactcc attgatacac ctgaaaaatt cgaagccaaa cgcgcggaac ttgccgagcg
     6481 tgaatgggcg cgaatgaaag aaaacaactc ggcaacctgc cgctcctgcc ataactacga
     6541 tgcgatggat catgcgaagc agcatcctga agcggcacgt cagatgaagg tggcagcgaa
     6601 agataatcaa tcctgcatcg actgtcataa aggtattgcc caccagttac cggatatgag
     6661 tagcggcttc cgtaagcagt tcgatgagct gcgcgccagt gctaatgaca gtggtgacac
     6721 gctgtactct attgatatta agccaattta tgcggcgaaa ggcgataaag aagcctctgg
     6781 ttctctgctg cctgcttcgg aagtgaaagt ccttaaacgt gacggcgact ggctgcaaat
     6841 tgaaattacc ggctggacgg aaagcgccgg acgtcagcgt gtactcaccc aattcccagg
     6901 taaacgcatc tttgttgcct cgattcgtgg tgatgtgcag cagcaggtaa aaacgctgga
     6961 gaaaaccacc gttgccgaca ccaataccga gtggagcaag ttgcaggcca ctgcgtggat
     7021 gaagaaaggt gatatggtga acgatatcaa accgatctgg gcttatgcgg attcgttgta
     7081 caacggcacc tgtaaccagt gccacggcgc accggaaatc tctcactttg atgctaacgg
     7141 ctggattggc acgctcaacg gcatgattgg ctttaccagt ctcgataaac gtgaagaacg
     7201 caccttgttg aaatatctgc aaatgaatgc gtctgacatc gcaggtaagg ctcacggcga
     7261 taagaaggaa gaaaaataat gaacaataac gatctctttc aggcatcacg tcggcgtttt
     7321 ctggcacaac tcggcggctt aacagtcgcc gggatgctgg ggccgtcatt gttaacgccg
     7381 cgcagtgcga ctgcggcgca agcggcggct gtcatctcga aagagggcat tcttaccggg
     7441 tcgcactggg gggctatccg cgcgacggtg aaggatggtc gctttgtggc ggcaaaaccg
     7501 ttcgaactgg ataaatatcc gtcgaaaatg attgccggat tgccggattg ccggattgcc
     7561 ggattgccgg attgccggat tgccggattg ccggattgcc ggatcacgta cacaacgcgg
     7621 cgcgtattcg ttatccgatg gtacgcgtgg actggctgcg taagcgccat ctcagcgata
     7681 cctcccagcg cggtgataac cgttttgtgc gcgtgagctg ggatgaagcc ctcgacatgt
     7741 tctatgaaga actggaacgc gtgcagaaaa ctcacgggcc gagtgccttg ctgaccgcca
     7801 gtggttggca atcgacgggg atgttccata acgcttcggg gatgctggcg aaagctattg
     7861 ccttgcatgg taatagcgtt ggtacgggcg gagattactc taccggtgct gcgcaggtga
     7921 tcctgccgcg cgtagtcggt tcgatggaag tgtatgaaca gcaaacctcc tggccgctgg
     7981 tattgcagaa cagcaaaacc attatgctgt ggggctccga tttgctgaaa aaccagcaag
     8041 cgaactggtg gtgcccggat cacgatgttt atgaatatta cgagcaacta aaagcgaaag
     8101 tcgccgccgg tgaaattgag gtcatcagca tcgatccggt tgtcacatcc acccatgagt
     8161 atctggggcg cgagcatgtg aagcacattg cggttaaccc gcaaactgac gtgccgctgc
     8221 aactggcgct ggcgtatacg ctgtacagtg aaaacctgta cgacaaaaac ttcctcgcta
     8281 actactgtgt aggttttgag cagttcctgc cgtatctgct gggtgagaaa gacggtcagc
     8341 cgaaagatgc cgcatgggct gaaaaactga ccggcattga tgccgaaacc attcgtgggc
     8401 tggcgcggca gatggcggcg aacagaacgc aaattattgc tggctggtgc gtgcagcgta
     8461 tgcagcacgg tgaacagtgg gcgtggatga ttgtggttct ggcggcgatg ctggggcaaa
     8521 ttggcctgcc aggtggtggt tttggttttg gctggcacta caacggcgca ggcacgccgg
     8581 ggcgtaaagg cgttattctg agtggtttct ccggctctac gtcgattccg cctgttcacg
     8641 acaacagtga ctacaaaggc tacagcagca ccattccgat tgcccgtttt atcgatgcga
     8701 tcctcgaacc ggggaaagtg atcaactgga acggtaaatc ggtaaaactg ccgccactga
     8761 aaatgtgtat ttttgccgga actaacccat tccatcgcca tcagcagatc aaccgcatta
     8821 ttgaaggctg gcgcaagctg gaaacggtta tcgccataga taaccagtgg acctcaacct
     8881 gccgctttgc cgatattgta ctgcctgcga ccacgcagtt tgagcgtaac gatctcgacc
     8941 agtacggcaa ccactccaac cgtggcatta tcgccatgaa acaggtggtg ccgccgcagt
     9001 tcgaggcgcg caacgacttt gatattttcc gcgagctgtg ccgtcgcttt aatcgcgaag
     9061 aagcctttac cgaagggctg gacgaaatgg gctggctgaa acgcatctgg caggaaggtg
     9121 tacaacaagg caaaggacgc ggcgttcatc tgccagcgtt tgatgacttc tggaataaca
     9181 aagagtacgt cgagtttgac catccgcaga tgtttgttcg ccaccaggca ttccgcgaag
     9241 atccggatct cgaaccgctg ggcacgccga gtggcctgat tgagatctac tcgaaaacca
     9301 tcgccgatat gaactacgac gattgtcagg ggcatccgat gtggtttgag aaaatcgaac
     9361 gctcccacgg tgggcccggc tcgcagaagt atccgttgca tctgcaatct gtgcatccgg
     9421 atttccgact tcactcgcag ttatgtgagt cggaaactct gcgtcagcaa tatacggtag
     9481 cgggtaaaga gccagtattc attaacccgc aggatgccag cgcgcgcggt attcgtaacg
     9541 gtgatgtggt acgcgtcttt aacgctcgcg gtcaggtgtt ggcaggggca gtagtttctg
     9601 accgctatgc acccggcgtg gcacgaattc acgaaggggc atggtacgat ccagataaag
     9661 gcggcgagcc tggtgcgctg tgcaaatacg gtaaccccaa cgtgctgacc atcgacatcg
     9721 gtacttcgca gctggcgcag gcgaccagtg cgcacactac gctggtggaa attgagaagt
     9781 acaatggagc agtggagcag gtgacggcgt ttaacggccc tgtggagatg gtggcgcagt
     9841 gcgaatatgt tcccgcgtcg caggtgaaat catgaccacg ctgacagcac aacagattgc
     9901 ctgtgtttac gcctggctgg cgcagttgtt ctcccgtgaa ctggacgatg aacaactgac
     9961 gcaaatcgcc agtgcgcaga tggctgaatg gttttcgttg ctgaaaagcg aaccgccgct
    10021 ggctgcggcg gtgaatgagc tggaaaactg tattgccacg ctgacagtac gtgacgatgc
    10081 ccgtctggaa ctggccgctg acttttgcgg cctgtttttg atgactgata agcaggcggc
    10141 gctgccgtat gcatcggcct acaaacagga cgagcaagag attaaacgct tgttagttga
    10201 ggcagggatg gaaaccagcg gcaatttcaa cgaaccggca gaccatctgg cgatctatct
    10261 cgagttgttg agtcatctgc atttttcgct gggagagggg accgttcctg cgcgaagaat
    10321 cgacagtttg cggcaaaaaa cactgacggc gctgtggcaa tggttaccag agtttgctgc
    10381 gcgttgccat cagtatgaca gctttggttt ttacgcggca ctaagccagt tattgctggt
    10441 gttagtggag tgcgaccacc aaaacaaata acgtcgttta tgcgcctgaa aagacgcgtt
    10501 tagcgtcgca tcaggcatta tggcgcagtt gccggatgcg tcatcacatc cggcaaacac
    10561 acatcacgga tgagctacaa accgggaaag ccgctggcgt agcaggcggt tttcctgctt
    10621 caggtgtgca atatcatcca ttaacgtcag cgccaccgcg atccccggcc agtccagagc
    10681 cagttcatga cgcaggcgta ccgcgcgttg caccacaatg gcggcatggt cgtcaaatac
    10741 ccaggttgtt tcctggatct cacgcggttc aaccaccccc aaaccgacaa tttcattcaa
    10801 ctcctcttca gagatgccgg tatgcaggca aaattcggta atagtaaaag tcaccgtaac
    10861 attagccatc atgctttccc ccaatcttta cgtggatcaa aagacgactg ggcgtctgcc
    10921 agttgctgcc acagcgcggc agtgttttca tccggtttcg gcggcatcac gattttcagt
    10981 accgcataca gatcgccggt ctgttttttg ctcaccagac ctttgccttt aacgcgcaat
    11041 cgttgcccgg cctggctgcc tggcgggata gtcagcaaaa tgctttcttt cagtgttgga
    11101 acggtgactt tagcacccag cgccgcttcc cacgggctaa ccggcaccac aatttccaga
    11161 tcctggccga caatatcgaa cagcggatgt ggcgcaatat gaatcaccag ccacaaatcg
    11221 ccatttggac caccgttttc gcccggcgtc ccctggcctt tcagacggat gcgttgacca
    11281 ttgccgacgc ccgccgggat cttcacattc agcgttttcg ggatttcctg ttcgatcatg
    11341 ccaaaggcgt tataaaccgg caggttatag ctgatggtac gcttatgctc agtcagcgtt
    11401 tcttcgagga ataccgccac ttcgatttca atatcgtggc cgcgtgcggc ggggcgttga
    11461 cggctctggc gggcatgctg accgaaaatt gacgagaaga tatcgtcaaa atcttcggca
    11521 ttaaaactct gaccgtcgcc atgatggaac tgacggttaa attgcggatc gttgcgatgt
    11581 tgccacatct gatcatactc agcgcgacgt tgttcatcac ttaacacttc ccaggcttca
    11641 gcgacctctt tgaagcgggc ttcggcatcc ggttctttgc tgacatcagg atggtattta
    11701 cgggccagtc gacgataggc ggtcttgatt gtcttgagat cgtccgtcgg tttcacgccc
    11761 atgatggcgt aataatcctt taattccata gcgttatctc gcgtaaatca acacaaattg
    11821 aaggaacccc tgtaaggtaa ctcctataag tgtagggtaa tcctcaaaat ttcatatgcc
    11881 aacacagaat atgttattga aatcatcgtg gagaggcggt cgccatcaat atgggttgct
    11941 gaacatattt taaacaggtg aaaa
//
LOCUS       DADMHC010000122        11823 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.122, whole genome shotgun sequence.
ACCESSION   DADMHC010000122 DADMHC010000000
VERSION     DADMHC010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11823)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11823)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11823
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.122"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..842
                     /locus_tag="JNZ57_002736"
     CDS             <1..842
                     /locus_tag="JNZ57_002736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HAY8828903.1"
                     /translation="NYRNELLHGETLYLDNPRSNKKGRIVRTVDNYIALLCSLLRFAY
                     QSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGE
                     LAALAWEDVDFEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTG
                     HHRKSEITFYHREYGRTEKQKLHFVFMPRVCNEKQKPYYSVSSLGARWNAAVKRAGIR
                     RRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA
                     RLS"
     gene            894..1829
                     /gene="ttcA"
                     /locus_tag="JNZ57_002737"
     CDS             894..1829
                     /gene="ttcA"
                     /locus_tag="JNZ57_002737"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HAY8828904.1"
                     /translation="MQENQQITKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMV
                     CLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHVLPVYLEKLGVEYKI
                     VEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFL
                     NMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIQRFADAKAFPIIPCNLCGSQPN
                     LQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVNGGD
                     LAFDREEIPLQPAGWQPEEEENQLDELRLNVVEVK"
     gene            complement(1958..3331)
                     /gene="dbpA"
                     /locus_tag="JNZ57_002738"
     CDS             complement(1958..3331)
                     /gene="dbpA"
                     /locus_tag="JNZ57_002738"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase DbpA"
                     /protein_id="HAY8828905.1"
                     /translation="MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAATLPAILAGKDVR
                     VQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTK
                     ILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLD
                     MGFSDAIDDVIRFAPASRQTLLFSATWPEAIAVISGRVQRDPLAIEIDSTDALPPIEQ
                     QFYETSSKGKIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLE
                     QRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTAR
                     AGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSIVPLEAEMATLCIDGGKK
                     AKMRPGDVLGALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKT
                     CRVRLLK"
     gene            complement(3361..3534)
                     /locus_tag="JNZ57_002739"
     CDS             complement(3361..3534)
                     /locus_tag="JNZ57_002739"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828906.1"
                     /translation="MTTLIYLQIPVPEPIPGDPVPVPDPIPRPQPMPDPPPDEEPIKL
                     SHRERRSARIRAC"
     gene            complement(3809..4792)
                     /gene="zntB"
                     /locus_tag="JNZ57_002740"
     CDS             complement(3809..4792)
                     /gene="zntB"
                     /locus_tag="JNZ57_002740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZntB"
                     /protein_id="HAY8828907.1"
                     /translation="MEAIKGSDVNVPDAVFAWMLDGRGGVKPLENTDVIDEAHPCWLH
                     LNYVHHDSAQWLATTPLLPNNVRDALAGESTRPRVSRLGEGTLITLRCINGSTDERPD
                     QLVAMRVYMDGRLIVSTRQRKVLALDDVVSDLEEGTGPTDCGGWLVDVCDALTDHSSE
                     FIEQLHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPW
                     MSDDQRRRMQDIADRLGRGLDEIDACIARTGVMADEIAQVMQENLARRTYTMSLMAMV
                     FLPSTFLTGLFGVNLGGIPGGGWQFGFSIFCILLVVLIGGVALWLHRSKWL"
     gene            5047..6279
                     /gene="dgcM"
                     /locus_tag="JNZ57_002741"
     CDS             5047..6279
                     /gene="dgcM"
                     /locus_tag="JNZ57_002741"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcM"
                     /protein_id="HAY8828908.1"
                     /translation="MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAARLLMQDLTFSQ
                     LRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRELTETEPVI
                     IFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAA
                     LNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQ
                     TYAGPIEIYGDKLMLCIVHDITEQKRQEEQLEHAAHHDAMTGLLNRRQFYHITEPGQM
                     QHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGE
                     EFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRV
                     DDALYRAKNDGRNRVLAA"
     gene            complement(6300..6863)
                     /gene="smrA"
                     /locus_tag="JNZ57_002742"
     CDS             complement(6300..6863)
                     /gene="smrA"
                     /locus_tag="JNZ57_002742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA endonuclease SmrA"
                     /protein_id="HAY8828909.1"
                     /translation="MNLDDKSLFLDAMEDVQPLKRATDVHWHPTRNQRAPQRIDTLQL
                     DNFLTTGFLDIIPLSQPLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMV
                     FSFIHQALADGLRNVLIIHGKGREDKSHANIVRSYVARWLTEFDDVQAYCTALPHHGG
                     SGACYVALRKTAQAKQENWERHAKRSR"
     gene            complement(7193..8101)
                     /locus_tag="JNZ57_002743"
     CDS             complement(7193..8101)
                     /locus_tag="JNZ57_002743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8828910.1"
                     /translation="MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELE
                     EGLAAQLFFRRSKGVTLTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMG
                     ASISRSLMPAVISRFHQQHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHE
                     FTFEKLLEKQFAIFCRPGHPAIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT
                     PQVGVVCETFSACISLVAKSDFLSILPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQ
                     RRDSRQTPLTPSLITQFRRECGYLQS"
     gene            8277..9430
                     /locus_tag="JNZ57_002744"
                     /pseudo
     CDS             8277..9430
                     /locus_tag="JNZ57_002744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415854.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallo-hydrolase"
     gene            9430..10875
                     /locus_tag="JNZ57_002745"
     CDS             9430..10875
                     /locus_tag="JNZ57_002745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HAY8828911.1"
                     /translation="MQEIYRFIDDAIEADRQRYTDIADQIWDHPETRFEEFWSAEHLA
                     SALESAGFTVTRNVGYIPNAFIASFGQGKPVIALLGEYDALAGLSQQAGCAQPTSVTP
                     GENGHGCGHNLLGTAAFAAAIAVKKWLEQYGQGGTVRFYGCPGEEGGSGKTFMVREGV
                     FDDVDAALTWHPEAFAGMFNTRTLANIQASWRFKGIAAHAANSPHLGRSALDAVTLMT
                     TGTNFLNEHIIEKARVHYAITNSGGISPNVVQAQAEVLYLIRAPEMTDVQHIYDRVAK
                     IAEGAALMTETTVECRFDKACSSYLPNRTLENAMYHALSHFGTPEWNSEELAFTKQIQ
                     ATLPPNDRQNSLNNIAATGGENGKAFALRHRETVLANEVAPYAATDNVLAASTDVGDV
                     SWKLPVAQCFSPCFAVGTPLHTWQLVSQGRTSIAHKGMLLAAKTMAATTLNLFIDSGL
                     LQECQQEHQQVTDTQPYHCPIPKNVTPSSLK"
     gene            10912..>11823
                     /locus_tag="JNZ57_002746"
     CDS             10912..>11823
                     /locus_tag="JNZ57_002746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415852.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="p-aminobenzoyl-glutamate transporter"
                     /protein_id="HAY8828912.1"
                     /translation="MSMSSIPSSSQSGKLYGWVERIGNKVPHPFLLFIYLIIVLMVTT
                     AILSAFGVSAKNPTDGTPVVVKNLLSVEGLHWFLPNVIKNFSGFAPLGAILALVLGAG
                     LAERVGLLPALMVKMASHVNVRYASYMVLFIAFFSHISSDAALVIMPPMGALIFLAVG
                     RHPVAGLLAAIAGVGCGFTANLLIVTTDVLLSGIRTEAAAAFNPQMHISVIDNWYFMA
                     SSVVVLTIVGGLITDKIIEPRLGQWQGNSDEKLQTLTESQRFGLRIAGVVSLLFIAAI
                     ALMVIPENGILRDPINHTVMPSPFIKGI"
BASE COUNT         3059 a         2978 c         2920 g         2866 t
ORIGIN      
        1 taaactaccg gaatgaactg ctgcatggag aaacgcttta cctagataat ccaagatcca
       61 acaaaaaagg aagaatcgtg cgcacagttg ataactatat cgccctgctc tgttcgttgt
      121 tacgttttgc gtatcagtcg ggatttatat caaccaaacc atttgaagga gtaaaaaaat
      181 tacagcgaaa cagaataaaa cctgacccgt tatctaaaac agaattcaat gcattaatgg
      241 aaagtgaaaa aggacagagc caaaacttgt ggaaatttgc cgtttactcc gggcttcgtc
      301 acggggaact ggcagctctg gcgtgggagg atgtggattt cgagaaggga attgtgaatg
      361 tcagaagaaa cctgacgata cttgatatgt tcggtccccc aaaaacaaat gccgggatcc
      421 ggacggtaac attactgcag ccggctcttg aagcactgaa ggagcaatac aaactgaccg
      481 ggcatcatcg caaaagcgaa atcacttttt atcatcggga gtacggcaga actgaaaagc
      541 aaaaactgca ttttgttttc atgcccaggg tgtgtaacga aaaacagaaa ccttattact
      601 cggtaagcag tttgggtgca agatggaatg cagcagtaaa acgtgctggt attcgccgcc
      661 gtaatccgta ccatacgcga catacttttg cctgctggct gttgacggca ggagcgaacc
      721 cggcatttat agccagccag atggggcatg aaactgcgca aatggtgtat gaaatttacg
      781 gtatgtggat tgatgacatg aacgacgaac agatagccat gttgaatgcg cggttatcgt
      841 agttgcaaag tttgccccca atttgcccca tttagtacca gagaactgaa ataatgcaag
      901 aaaatcaaca aattacaaag aaagaacaat acaacctgaa caaattacaa aaacgtctac
      961 gtcgtaacgt gggcgaagcc attgctgact tcaatatgat tgaagaaggc gatcgcatca
     1021 tggtttgcct ctcagggggt aaagacagct ataccatgct ggagattctg cgcaatttgc
     1081 agcaaagcgc gccaatcaat ttttcgctgg tggctgttaa cctcgatcaa aagcaaccgg
     1141 gcttcccaga acacgttctg cccgtgtatc ttgaaaagct gggcgttgag tacaagattg
     1201 tcgaagagaa cacttacggt atcgtgaaag agaagattcc agagggcaaa accacttgct
     1261 cactgtgttc tcgccttcgt cgcggtatcc tttatcgtac cgcaacggaa ctgggggcga
     1321 cgaagatcgc gctgggtcac catcgtgacg atatcctgca gacgttgttc ttaaatatgt
     1381 tctacggcgg caagatgaaa ggtatgcctc cgaaactgat gagcgatgat ggcaaacata
     1441 tcgttattcg tccgctggcc tactgccgcg agaaagatat tcagcgattt gccgatgcaa
     1501 aagcgttccc gattattccg tgcaacctgt gcggttcaca gcctaacctg caacgtcagg
     1561 tgattgctga catgttgcgt gactgggata aacgttatcc agggcgtatc gagacgatgt
     1621 tcagcgcgat gcagaatgtg gtgccgtcgc atctgtgcga taccaacctg ttcgatttca
     1681 aaggcatcac ccacggttct gaagtggtta acgggggtga tctggcgttt gatcgcgaag
     1741 agatcccact acaaccggcg ggctggcagc cagaagaaga ggaaaatcag ttggatgagt
     1801 tacggctgaa tgtggttgaa gtgaaataac caggatagcg cccgatgcgc aagcgtatcg
     1861 ggctactctt atggaggccg gataagacgc ggccaacgtc gcatccggca atgccgaaga
     1921 agatgtttac tcttgcaccc ggcaattcaa catttcatta ttttaataac cgcacccggc
     1981 acgtttttcc tttaatcttc ccgccctgta actgtttcca tgctttatga gcaacagcct
     2041 gacggaccgc gacatagaca tgcgccggat gcacggcgat tttgccaata tctgcgccat
     2101 caagcccgat atctcctgtc agtgcaccta atacatcacc cgggcgcatt ttggcttttt
     2161 tcccgccatc gatacacaac gttgccattt ctgcttccag cggcacaatg gaactattag
     2221 ctggcggcgt ttgccagtta agttttatct gcaacatgtc agaaatgata ttggcccgct
     2281 gtgcttcttc cggagcacag aaactgatcg ccagaccgct atttcctgca cgagctgtac
     2341 ggccgatgcg atgtacatga acttcagggt cccacgccag ctcaaagttc accaccagct
     2401 caagcgattt aatatccaga ccacgcgcag caacatcagt cgcaaccagt acacgggcgc
     2461 taccgttagc aaaacgtacc agggtctgat cgcgatcgcg ttgctccaaa tcgccgtgta
     2521 atgacaatgc actttgccct acttcattca gcgcgtcgca gacagcctgg caatcttttt
     2581 tggtattgca aaacaccacg caagaggatg gctgatgcaa gcttaataac cgttgcaaca
     2641 gaggaatttt gcctttgctg gatgtctcat aaaattgttg ttcaatgggt ggcaaagcat
     2701 ctgttgagtc aatttcaatc gccaaaggat cgcgttgcac tcgtccgctg attacggcga
     2761 tggcttccgg ccaggttgcc gaaaacagaa gcgtctgtcg agatgcaggc gcaaaacgga
     2821 tgacatcatc aatggcatcg ctaaatccca tatccagcat gcggtcggcc tcatccatca
     2881 ccaaagtatt cagcgcatcc agtgataccg tgcctttttg caagtgatcc agcaaacgac
     2941 ccggcgttgc cacgataata tgcggcgcat gttgcaacga atcacgctgc ataccgaacg
     3001 gttgaccacc gcacaacgtc aaaattttgg tatttggcag aaaacgcgcc agccgacgca
     3061 attcacctgc cacctgatcc gccagttcac gcgtaggaca cagcactaaa gcctgggttt
     3121 gaaatagcga cgcatcaatt tgctgtaaca agccgaggcc aaaagccgcc gttttgccgc
     3181 tgccggtttt cgcctgcacg cgaacatctt ttccggcaag gatcgccgga agcgtggcgg
     3241 cctgcaccgg cgtcatagtt aaataaccca actcattaag gttcgtgagt tgggcgggag
     3301 gcaaaacatt cagggtagaa aaagcggtca caatctattc tcgtggtcat cgacgcaaag
     3361 ttagcaggcg cgtatcctcg cagatctacg ctcacgatgc gacaatttaa tcggttcttc
     3421 atcgggtggt gggtcaggca tgggttgcgg gcgagggatc ggatcgggca ctggaacagg
     3481 atcgccagga atcggttcag ggacaggaat ttgcaaataa ataagtgtcg tcatatttcc
     3541 ctccggtcat tgggtggact cttaaagggt agacgctgat aaataacagg caaaaaaaag
     3601 ccgactcatc aaagtcggcg tcgtacgaat caattgtgct atgcagtaat tcaaaaaagg
     3661 aagtaagaca atatggagcg caacgcccat cgcttgacgt tgcattcacc tgcaagggag
     3721 atattgccct gaatgggtag agagtttatt gacttcgctc aaactttgcg gcgtttttgt
     3781 atacagacag ccggaaaaat tgcttttgtt acaaccattt actacgatgc aaccataaag
     3841 caacaccacc aataagaaca actaacagaa tacaaaaaat tgaaaatccg aattgccacc
     3901 cgccgccagg gatcccacca aggttgacgc caaataaccc tgtcagaaag gtactgggta
     3961 aaaagaccat tgccatcaat gacattgtat aggtacgacg agctaaattt tcctgcatca
     4021 cctgagcgat ttcatccgcc atcacgccag tccgtgctat acaggcgtcg atttcgtcaa
     4081 gaccgcgccc aaggcgatcg gcaatatcct gcatccgacg gcgttggtca tcgctcatcc
     4141 acggcaaacg ttcactggca agacgagcat aaacatcacg ttgcggtgcc atatagcgac
     4201 gcatcacgat taattgtttg cgcagcagag ccaggaatcc acgcggtgga atttgctgat
     4261 caaggagatt atcttcaagg tcgataattt tatcgtgcag ctgctcgata aattcgctgg
     4321 aatgatcggt caacgcatcg cacacatcca ccagccaccc tccgcaatcg gtcggacccg
     4381 tgccctcttc cagatcgctc accacatcgt ccagcgccag cactttgcgt tgtcgggtcg
     4441 aaacaattaa ccgcccgtcc atatatacac gcatggcgac cagttgatcg gggcgttcat
     4501 cggtgctgcc gtttatacag cgcaatgtaa tcagcgtgcc ttcaccgaga cggctgactc
     4561 ggggccgtgt gctctcgcct gccagcgcat cacgtacgtt attgggaagc agcggtgttg
     4621 tcgccagcca ttgggcgcta tcatggtgta cataattaag gtggagccag cagggatgcg
     4681 cttcatcaat cacatctgta ttttccagcg gtttaacgcc gcctctacca tccagcatcc
     4741 aggcaaatac tgcatccggg acattaacgt ccgatccctt aatcgcttcc acagtgcctc
     4801 catcatcaac gcattatttt gtagtctagc cttctggccc tgttacgcaa catctcatca
     4861 ccctattacc ctgaaatgat taataaaatt ctgtctaaat tgaatacaaa aagcaaaatg
     4921 cttttccgta tacaaaccgt gtgaagtgtt aaatagcgtc tatcattatc agaattatct
     4981 gatcatatga cgtggctttt ttgcgatcgg atagcaacaa aaattgataa aaataacggg
     5041 atctcaatga ttacgcacaa cttcaatacc ctggacttac tcaccagtcc tgtctggatt
     5101 gtttcgccct ttgaggaaca gttaatttat gccaatagcg cggcgcgact gttgatgcaa
     5161 gacctcacgt ttagtcagct acgaaccgga ccctattccg tctcctcaca aaaagaactg
     5221 ccgaaatacc tctccgatct gcaaaaccaa cacgatatta tcgaaatcct cactgttcag
     5281 cgtaaagaag aggaaacagc attaagctgt cggcttgttt tgcgagagct gacagaaaca
     5341 gaaccggtga ttattttcga aggtatcgaa gcgccggcaa cgctgggttt aaaagccagt
     5401 cgctcggcaa attatcagcg caaaaaacaa ggtttttatg cgcgcttttt tctgactaac
     5461 tctgcaccaa tgttgttgat tgacccctca cgagatggcc aaatcgtcga tgctaacctc
     5521 gccgcgctca atttctacgg ttataaccat gaaacgatgt gccagaaaca tacctgggaa
     5581 attaatatgc tcgggcgtcg cgtcatgcct atcatgcatg aaatttcgca tttacccggc
     5641 ggtcataaac ctttgaattt tgttcataaa ctggcggatg gatctactcg tcatgtgcag
     5701 acctatgccg ggccgattga aatttatggc gacaagctca tgttatgtat tgtgcatgat
     5761 attactgagc aaaaacggca ggaggagcag ctggaacatg ctgctcacca tgacgcgatg
     5821 accggattac tgaatcggcg acagttttat cacattacgg aaccaggcca aatgcagcac
     5881 ctcgccatcg cccaggatta cagcttgttg ctcatcgaca ccgatcgttt taaacacatt
     5941 aacgatctct atgggcattc taaaggtgat gaggtgttat gcgccctcgc ccgcaccctc
     6001 gaaagttgcg ctcgcaaagg cgatttggtg tttcgttggg gaggcgaaga gtttgtctta
     6061 ttgctaccaa gaaccccact ggatactgcg ctttcgctgg ctgaaactat ccgtgtaagc
     6121 gtggccaaag tgagtatttc gggcttacca cgttttaccg tcagcattgg tgtggcgcat
     6181 cacgaaggaa atgaaagcat cgatgaactg tttaaacgcg ttgatgatgc tttgtatcgg
     6241 gcgaaaaatg atggacgcaa ccgcgtgctg gcggcataag ccgcggatgc gtctcgagat
     6301 caacggctgc gcttagcgtg gcgctcccag ttttcttgct tcgcctgcgc cgttttacgt
     6361 agtgcgacgt aacacgcccc gctgccgcca tgatgcggta gcgcggtgca atatgcctga
     6421 acatcatcaa attcggtcag ccagcgcgcc acatagctgc ggacaatatt ggcatgcgat
     6481 ttatcttccc gccctttacc atgaataatc aacacattac gcaaaccatc cgccagggct
     6541 tggtgaatga aactgaacac cattttgcgg cactcttcca ccggctggcg caaaagattc
     6601 aggctcgcct gttgcggata tttaccactg cgcagcttat ccagcacccc atgttgcaac
     6661 ccttcccgcc gaaactccag cggctgactt agcgggatga tgtcgagaaa tccggtggtg
     6721 aggaaattat caagctgcag cgtgtcgata cgctgcggcg cacgttggtt acgcgttgga
     6781 tgccagtgga catctgtagc acgtttcagc ggctggacat cttccatggc gtcaagaaac
     6841 agcgatttgt cgtcaaggtt catgttacat cctcccgcaa ttaagagcgc gatatgataa
     6901 ccagaccggg tcggtccaac aacgtattac ccaaaattcc agtaataagt tccaaatatt
     6961 gccgatattt taagcaaaat gcttatgcat gattattcat tcacgatatt aataatgtaa
     7021 cttatatttt cgtgaaatct gtcactgaag aaaattggca actaaaggtt aaaaccgtta
     7081 taacacagtc accggcgcag aggagacaat gccggactta agacgcggat gcactgctgt
     7141 gtgtactgta gagtctggcg gatgtcgaca gactctattt ttttatgcag ttttaacttt
     7201 gcagatagcc gcattctcgc cggaattgcg tgattaatga cggggtcagt ggtgtctggc
     7261 gactatcacg ccgctgaatc aaataatagg ccgctttcgg taaaatttcg ctaaccggca
     7321 acatcaccag cccctgtccg tgcaagggat cgcagcccat ttcttcaggc agtatgctga
     7381 gaaaatcgct ttttgccacc agactgatac aggctgagaa cgtctcgcag actacaccga
     7441 cctgtggcgt ttgcgcctga tcgtcaagca attcactcaa ctgtttgtag taactgccgt
     7501 gtggcgtcgg cattgtccag ctgtaatcca gtaactgttt gatcgaacgg gcaccaatgg
     7561 cggggtgtcc cgggcggcaa aagatcgcga attgcttttc cagtaatttc tcaaaagtaa
     7621 attcgtggtc gtacggtccc tgataatagg tattgatggt gaaatccaat tctccctgac
     7681 gcaattcatt aatcatcgac accagttgcc cttccataat gcgtactttt acctgcggat
     7741 gctgctgatg aaaacgagat atgacagctg gcatcagact gcgggaaata ctggccccca
     7801 tgccgatatt aatctgccct gccagttgcc cttgtcgttg gcgaatatcc tcttgggctg
     7861 cgcgcagctc ttcaagaata agactggcgt gctgataaaa actttcaccg gcatcagtta
     7921 acgtcacgcc tttactacgg cgaaaaaaga gttgcgccgc taatccttct tccaactcct
     7981 gaatagattt actcagtgcc ggttgcgaca tattcaacat tcggctcgct ccgcgaatgc
     8041 tgccctgacg agccacttca acaaaagcac gaatttgatg aatttttacc tgaaaagcca
     8101 tgacgccacc gataaccgtt atttatcaga ccaaagaaac tggcatctac tttaatgcag
     8161 atgattgtgt cagggtaatt tatgaacggt taaaactgtg aaaaatcagt tagtgataag
     8221 taaaaactat cgctacgtga accgggtcac actttttact gatgacggga aaggttatgg
     8281 agtctttgaa tcaatttgtt aattcgcttg ccccaaaatt atcgcactgg cgacgtgatt
     8341 ttcatcacta tgcagagtct ggctgggtgg aattccgcac tgccaccctt gttgcggaag
     8401 aattgcagca gctcggctat tcactggcgc tgggccgcga agtagttaat gaaagtagcc
     8461 ggatgggact acctgatgaa ctcactctac aacgcgaatt cgagcgcgct cgtcaacagg
     8521 gtgcgctagc acaatggatt gcggtttttg aaggtggttt cactggtatc gtcgccaccc
     8581 tggataccgg tcgccccggt ccggtgatgg ctttccgtgt cgatatggac gcgctggatc
     8641 tcagtgaaga gcaggatgtc agccatcgcc cctaccgcga cggttttgcg tcatgtaacg
     8701 ccggaatgat gcatgcctgt ggtcatgatg gacataccgc cattgggctt gggctggcgc
     8761 atacccttaa acaattcgag tccggactac atggcgtcat caaactgatt tttcagcctg
     8821 cagaggaagg tacgcgtggc gcgcgggcgc aaaaccagaa gacggtcaca atgccttgtt
     8881 ggcggcagca caagccactc ttgcactgca tgcaatcgcc ccgcacagcg aaggagcttc
     8941 cagagtaaac gtgggcgtta tgcaggcagg aagcggtcgt aacgttgttc ctgcctcggc
     9001 gttgctgaaa gtggaaacac gcggggccag cgacgtcatt aatcaatatg tttttgaccg
     9061 tgcacaacaa gcgattcagg gcgcagcaac catgtatggt gtcggcgttg aaactcgtct
     9121 gatgggtgca gctaccgcca gttctccttc gccgcaatgg gtcgcatggt tgcaaagtca
     9181 ggcggctcag gtcgcggggg tcaatcaggc cattgaacgt gttgaagcgc ctgcgggttc
     9241 cgaagatgcc acattaatga tggcccgcgt gcagcaacat caagggcaag cctcctacgt
     9301 ggtgtttggc acacagctgg cggcaggtca tcacaacgaa aaattcgatt ttgacgagca
     9361 ggttctcgct attgccgtcg aaacgctggc gcgcaccgcg ctcaattttc cctggacgcg
     9421 aggtatctga tgcaggaaat ctatcgtttt atcgacgatg cgattgaagc cgatcgccaa
     9481 cgttataccg atattgccga tcaaatctgg gatcatccag aaacacgttt tgaagagttc
     9541 tggtcagcgg agcatctggc ttcggcgctg gaatctgcag gcttcaccgt tacccgcaac
     9601 gtaggctata tcccaaatgc ctttattgct tcgtttggtc aaggcaaacc ggttatcgcc
     9661 ctgctgggag aatatgacgc cctggcaggt ttaagtcagc aagcaggttg cgcgcaacct
     9721 acatccgtga cgcccggtga aaatggtcac ggttgcggac acaatttgct gggaaccgcc
     9781 gcctttgccg ctgcaatagc cgtcaagaaa tggctggaac aatatgggca aggcggcacg
     9841 gtgcgctttt atggttgtcc tggcgaagaa ggcggctcgg gtaaaacgtt catggttcgc
     9901 gagggggtat ttgatgatgt ggatgcggca ctcacctggc acccggaagc ctttgccggt
     9961 atgttcaata cccgcacgct ggcaaacatt caggcatcat ggcgctttaa agggatcgca
    10021 gcacatgccg cgaattcccc tcatttggga cgcagcgccc ttgatgccgt aacgttgatg
    10081 accactggca ccaacttcct caacgaacat attattgaaa aagcgcgcgt acactatgcc
    10141 atcacaaata gcggcgggat ctcgcccaac gtggtccagg cgcaggcaga agtgctttat
    10201 cttatccgcg cccccgaaat gaccgacgtg cagcatattt atgatcgggt cgccaaaatc
    10261 gccgaaggtg cggcattgat gaccgaaacc acggttgaat gccgcttcga caaagcctgt
    10321 tccagttatc tcccgaatcg caccttagaa aatgccatgt accatgccct atcccatttt
    10381 ggtaccccgg aatggaactc cgaagaactg gcttttacga aacaaattca ggctacgctc
    10441 ccccccaacg atcggcaaaa cagtctgaat aatatcgccg caaccggtgg cgaaaacggc
    10501 aaggcttttg cactacgtca tcgtgaaacg gtactggcga atgaggtcgc tccatatgcc
    10561 gccaccgata acgtgcttgc ggcatcgact gatgtcggcg acgtcagttg gaaactgcct
    10621 gttgcccagt gtttcagccc ctgttttgcc gtcggtacac cgctacatac gtggcaactg
    10681 gttagccagg ggcgaacatc tattgctcat aaaggaatgc tgctggcggc gaaaactatg
    10741 gcagcaacca cactcaatct cttcattgat tcagggctat tgcaagaatg ccaacaagag
    10801 catcagcaag ttacggacac gcaaccgtat cactgcccta tcccaaaaaa cgtgacaccg
    10861 tcatctttaa aataacaaca acaacgcaaa cacaacaacc gaggaatgcc catgagtatg
    10921 tcatccatac cgtcgtcctc ccaatccggg aagctctatg gctgggtcga aagaattggt
    10981 aacaaggttc cccatccttt tttgctcttt atctatttga ttatcgtact catggtgacg
    11041 acggcaattt tgtcggcctt tggcgtcagt gcgaaaaacc cgaccgatgg aacgccggtg
    11101 gtggtgaaaa acctgctcag tgtggaagga ttacactggt ttttacccaa tgttattaaa
    11161 aactttagcg gttttgctcc acttggtgcg atcctggcgc tggttttagg tgccggtctg
    11221 gcggagcgcg tcggcttact gccagcgcta atggttaaaa tggcatcgca tgttaatgtc
    11281 cgctacgcca gttatatggt gctgtttatt gcttttttca gccacatttc ttccgatgcg
    11341 gcgttagtga tcatgccacc gatgggtgcg ctgatttttc tggcggtggg caggcatcca
    11401 gttgcaggtt tactggctgc cattgcaggc gtaggttgcg gctttacggc taatttactg
    11461 attgtcacaa ccgacgtgtt gctgtcgggg atccgcacgg aagcggcggc tgcgttcaat
    11521 ccgcaaatgc acatcagtgt aattgataac tggtatttta tggccagctc cgtagtcgta
    11581 ctgacgattg ttggcggcct gataaccgac aaaatcatcg agccacggtt aggtcaatgg
    11641 cagggaaaca gcgatgagaa actgcagaca ttgaccgaaa gtcagcgttt tggtttacgc
    11701 atagcaggtg tcgtatcgct actttttatt gctgcgatcg cgctgatggt gatcccggaa
    11761 aacgggatat tgcgcgatcc gattaatcac accgtgatgc catcaccctt tattaaaggt
    11821 atc
//
LOCUS       DADMHC010000123        11688 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.123, whole genome shotgun sequence.
ACCESSION   DADMHC010000123 DADMHC010000000
VERSION     DADMHC010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11688)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11688)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11688
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.123"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(67..714)
                     /gene="ychE"
                     /locus_tag="JNZ57_002747"
     CDS             complement(67..714)
                     /gene="ychE"
                     /locus_tag="JNZ57_002747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter YchE"
                     /protein_id="HAY8828913.1"
                     /translation="MIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARN
                     KTNLTANLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGED
                     KQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALF
                     ALCCWGLFRMAPWLVRVLRQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLIN"
     gene            1192..3867
                     /gene="adhE"
                     /locus_tag="JNZ57_002748"
                     /gene_synonym="adhC"
     CDS             1192..3867
                     /gene="adhE"
                     /locus_tag="JNZ57_002748"
                     /gene_synonym="adhC"
                     /EC_number="1.1.1.1"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase"
                     /protein_id="HAY8828914.1"
                     /translation="MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAAD
                     ARIPLAKMAVAESGMGIVEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAE
                     PIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKDATNKAADIVLQAAIAA
                     GAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTP
                     VVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFATHGGYLLQG
                     KELKAVQDVILKNGALNAAIVGQPAYKIAELAGFSVPENTKILIGEVTVVDESEPFAH
                     EKLSPTLAMYRAKDFEDAVEKAEKLVAMGGIGHTSCLYTDQDNQPARVSYFGQKMKTA
                     RILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAEN
                     MLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGV
                     ETEVFFEVEADPTLSIVRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHF
                     EELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSGTGSEVTPFAVVTDDATGQKYPLAD
                     YALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHAMEAYVSVLASEFSDGQALQALKLL
                     KEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLA
                     NALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKL
                     LAWLETLKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQCTGANPRYPLISELKQ
                     ILLDTYYGRDYVEGETAAKKEAAPAKAEKKAKKSA"
     gene            3991..4887
                     /locus_tag="JNZ57_002749"
                     /pseudo
     CDS             3991..4887
                     /locus_tag="JNZ57_002749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904641.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
     gene            complement(5169..5786)
                     /gene="tdk"
                     /locus_tag="JNZ57_002750"
     CDS             complement(5169..5786)
                     /gene="tdk"
                     /locus_tag="JNZ57_002750"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HAY8828915.1"
                     /translation="MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRF
                     GAGKVSSRIGLSSPAKLFNQNSSLFDEIRAEHEQQAIHCVLVDECQFLTRQQVYELSE
                     VVDQLDIPVLCYGLRTDFRGELFIGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQA
                     GRPYNEGEQVVIGDNERYVSVCRKHYKEALQVGSLTAIQERHRHD"
     gene            6391..6804
                     /gene="hns"
                     /locus_tag="JNZ57_002751"
     CDS             6391..6804
                     /gene="hns"
                     /locus_tag="JNZ57_002751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator H-NS"
                     /protein_id="HAY8828916.1"
                     /translation="MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEE
                     SAAAAEVEERTRKLQQYREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDE
                     NGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ"
     gene            complement(6948..7856)
                     /gene="galU"
                     /locus_tag="JNZ57_002752"
     CDS             complement(6948..7856)
                     /gene="galU"
                     /locus_tag="JNZ57_002752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HAY8828917.1"
                     /translation="MAAINTKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQY
                     VVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHV
                     TIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFD
                     ETGHSQIMVEQVADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRY
                     VLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAF
                     VEYGIRHNTLGTEFKAWLEEEMGIKK"
     gene            complement(8058..9071)
                     /gene="rssB"
                     /locus_tag="JNZ57_002753"
     CDS             complement(8058..9071)
                     /gene="rssB"
                     /locus_tag="JNZ57_002753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator RssB"
                     /protein_id="HAY8828918.1"
                     /translation="MTQPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDAL
                     ELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGV
                     EDVLLKPVKDLNRLREMVFACLYPSMFNSRVEEEERLFRDWDATVDNPAAAAKLLQEL
                     QPPVQQVISHCRVNYRQLVAADKPGLVLDIAALSENDLAFYCLDVTRAGHNGVLAALL
                     LRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHRELKNLI
                     LVSAGLNATLNTGEHQVQISNGVPLGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLML
                     SAE"
     gene            complement(9163..10068)
                     /gene="rssA"
                     /locus_tag="JNZ57_002754"
     CDS             complement(9163..10068)
                     /gene="rssA"
                     /locus_tag="JNZ57_002754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase RssA"
                     /protein_id="HAY8828919.1"
                     /translation="MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGS
                     LVGAAYACDRLSALEDWVTSFSYWDVLRLMDLSWQRGGLLRGERVFNQYREIMPETEI
                     ENCSRRFAAVATNLSTGRELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVN
                     PIPISLTRALGADIVIAVDLQHDAHLMQQDLLSFNVSEENSENGESLPWHARLKERLG
                     SITTRRAVTAPTATEIMTTSIQVLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAH
                     AAIAAGQLAVERKMDELLPLVRTNI"
     gene            10181..10639
                     /locus_tag="JNZ57_002755"
     CDS             10181..10639
                     /locus_tag="JNZ57_002755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HAY8828920.1"
                     /translation="MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQ
                     DADYLIKTWHPSCGAAALRAELMAGFAHTEWLGLTVFEHCWQDADNIGFVSFVARFTE
                     GGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ"
     gene            10689..11531
                     /gene="purU"
                     /locus_tag="JNZ57_002756"
     CDS             10689..11531
                     /gene="purU"
                     /locus_tag="JNZ57_002756"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008784958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HAY8828921.1"
                     /translation="MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHR
                     TGRFFMRTELEGIFNDSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLL
                     MKANYGGLDVEIAAVIGNHDTLRSLVERFDIPFELVNHEGLSRNEHDQKMADAIDAYK
                     PDYVVLAKYMRVLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAH
                     YVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYKVLAQRVFVYGNR
                     TIIL"
BASE COUNT         3162 a         2911 c         2647 g         2968 t
ORIGIN      
        1 cgggaacaaa gtaaaaataa tgacgaagta aacggagcat ggcagctccg tttcatttga
       61 aaggaattaa ttaatcaggc cggggaaaat ccccttaata ccagtaacga taaattcaat
      121 ccccaatgcc atcagcaata gccccataat acgcgtaatc acgttgatgc cggtctggcg
      181 taaaacccgt accagccaag gtgccatgcg gaacaatccc cagcaacata aagcgaacaa
      241 tgcaatagcc acaaagaaac caaacagata gctaatgctg tgataacgcg taccccagac
      301 gatggtagaa ctgatcgccc ctggccccgc catcaacggc aacgccaatg gcaccacacc
      361 aatgctttca cgtaccgcgg tttctgattt ttcttgcttg ttctgtttat cctcgccaag
      421 cttgccgctg atcatcgaca tcgctatcgt caccaccagg atgcccccgg cgatacggaa
      481 cgaatcaatt gatataccaa aaagttgcag aatcgtgtcg ccgagaaaaa gcgagatcca
      541 caagataatg gccacagaca ggttggctgt aaggttagtt ttgtttcgcg ctgccgctgt
      601 ctgataactg gtcatgctga taaagacggg aataatccct accgggttga ccagcgcaaa
      661 taacccgatg aaaaatttga agtaaacggg aaaatcaaaa aaggtctgaa tcacggttag
      721 ctccgaagca aaagccggat aatgttagcc ataaataagg ttgaaaagac gcgctgacaa
      781 tacgcctttt gacagcattt ttcacctcct aactacttaa aattgctatc attcgttatt
      841 gttatctagt tgtgcaaaac atgctaatgt agccaccaaa tcatactaca atttattaac
      901 tgttagctat aatggcgaaa agcgatgctg aaaggtgtca gctttgcaaa aaatttgatt
      961 tggatcacgt aatcagtacc cagaagtgag taatcttgct tacgccacct ggaagtgacg
     1021 cattagagat aataactcta atgtttaaac tcttttagta aatcacagtg agtgtgagcg
     1081 cgagtaagct tttgattttc ataggttaag caaatcatca ccgcactgac tatactctcg
     1141 tattcgagca gatgatttac taaaaaagtt taacattatc aggagagcat tatggctgtt
     1201 actaatgtcg ctgaacttaa cgcactcgta gagcgtgtaa agaaagccca gcgtgaatat
     1261 gccagtttca ctcaagagca agtagacaaa atcttccgcg ccgccgctct ggctgctgca
     1321 gatgctcgaa tcccactcgc gaaaatggcc gttgccgaat ccggcatggg tatcgtcgaa
     1381 gataaagtga tcaaaaacca ctttgcttct gaatatatct acaacgccta taaagatgaa
     1441 aaaacctgtg gtgttctgtc tgaagacgac acttttggta ccatcactat cgctgaacca
     1501 atcggtatta tttgcggtat cgttccgacc actaacccga cttcaactgc tatcttcaaa
     1561 tcgctgatca gtctgaagac ccgtaacgcc attatcttct ccccgcaccc gcgtgcaaaa
     1621 gatgccacca acaaagcggc tgatatcgtt ctgcaggctg ctatcgctgc cggtgctccg
     1681 aaagatctga tcggctggat cgatcaacct tctgttgaac tgtctaacgc actgatgcac
     1741 cacccagaca tcaacctgat cctcgcgact ggtggtccgg gcatggttaa agccgcatac
     1801 agctccggta aaccagctat cggtgtaggc gcgggcaaca ctccagttgt tatcgatgaa
     1861 actgctgata tcaaacgtgc agttgcatct gtactgatgt ccaaaacctt cgacaacggc
     1921 gtaatctgtg cttctgaaca gtctgttgtt gttgttgact ctgtttatga cgctgtacgt
     1981 gaacgttttg caacccacgg cggctatctg ttgcagggta aagagctgaa agctgttcag
     2041 gatgttatcc tgaaaaacgg tgcgctgaac gcggctatcg ttggtcagcc agcctataaa
     2101 attgctgaac tggcaggctt ctctgtacca gaaaacacca agattctgat cggtgaagtg
     2161 accgttgttg atgaaagcga accgttcgca catgaaaaac tgtccccgac tctggcaatg
     2221 taccgcgcta aagatttcga agacgcggta gaaaaagcag agaaactggt tgctatgggc
     2281 ggtatcggtc atacctcttg cctgtacact gaccaggata accaaccggc tcgcgtttct
     2341 tacttcggtc agaaaatgaa aacggctcgt atcctgatta acaccccagc gtctcagggt
     2401 ggtatcggtg acctgtataa cttcaaactc gcaccttccc tgactctggg ttgtggttct
     2461 tggggtggta actccatctc tgaaaacgtt ggtccgaaac acctgatcaa caagaaaacc
     2521 gttgctaagc gagctgaaaa catgttgtgg cacaaacttc cgaaatctat ctacttccgc
     2581 cgtggctccc tgccaatcgc gctggatgaa gtgattactg atggccacaa acgtgcgctc
     2641 atcgtgactg accgcttcct gttcaacaat ggttatgctg atcagatcac ttccgtactg
     2701 aaagcagcag gcgttgaaac tgaagtcttc ttcgaagtag aagcggaccc gaccctgagc
     2761 atcgttcgta aaggtgcaga actggcaaac tccttcaaac cagacgtgat tatcgcgctg
     2821 ggtggtggtt ccccgatgga cgccgcgaag atcatgtggg ttatgtacga acatccggaa
     2881 actcacttcg aagagctggc gctgcgcttt atggatatcc gtaaacgtat ctacaagttc
     2941 ccgaaaatgg gcgtgaaagc gaaaatgatc gctgtcacca ccacttctgg tacaggttct
     3001 gaagtcactc cgtttgcggt tgtaactgac gacgctactg gtcagaaata tccgctggca
     3061 gactatgcgc tgactccgga tatggcgatt gtcgacgcca acctggttat ggacatgccg
     3121 aagtccctgt gtgctttcgg tggtctggac gcagtaactc acgccatgga agcttatgtt
     3181 tctgtactgg catctgagtt ctctgatggt caggctctgc aggcactgaa actgctgaaa
     3241 gaatatctgc cagcgtccta ccacgaaggg tctaaaaatc cggtagcgcg tgaacgtgtt
     3301 cacagtgcag cgactatcgc gggtatcgcg tttgcgaacg ccttcctggg tgtatgtcac
     3361 tcaatggcgc acaaactggg ttcccagttc catattccgc acggtctggc aaacgccctg
     3421 ctgatttgta acgttattcg ctacaacgcg aacgacaacc cgaccaagca gactgcattc
     3481 agccagtatg accgtccgca ggctcgccgt cgttatgctg aaattgctga ccacctgggt
     3541 ctgagcgcac cgggcgaccg tactgctgct aagatcgaga aactgctggc atggctggaa
     3601 acgctgaaag ctgaactggg tattccgaaa tctatccgtg aagctggcgt tcaggaagca
     3661 gacttcctgg cgaacgtgga taaactgtct gaagatgcat tcgatgacca gtgcaccggc
     3721 gctaacccgc gttacccgct gatctccgag ctgaaacaga ttctgctgga tacctactac
     3781 ggtcgtgatt atgtagaagg tgaaactgca gcgaagaaag aagctgctcc ggctaaagct
     3841 gagaaaaaag cgaaaaaatc cgcttaatca gtagcgctgt ctggcaacat aaacggcccc
     3901 ttctgggcaa tgccgatcag ttaaggatta gttgaccgat ccttaaactg aggcactata
     3961 acggcttcca caacagggag ccgttttctt atgccacttc tcaatgatct gctcgatttc
     4021 agtgaccatc cgcttatgcc tccgccctct gcacaactat ttgcagaaca ccttcccacc
     4081 gagtggatac aacactgcct gacgctttct gctcatgcga ccgttcgccg ccgtcgttta
     4141 ccgggggaca tggttatctg gatggtggtg caatgagcca attaccgatg ttgttcgccg
     4201 tctgaacctg agcgcggatg gcgaagcggg gatgaacctg ctggcccgca gcgctgtcac
     4261 ccaagcgcgt cagcgcgtgg gggccgcccc agtggaatgg ctcttccgcc agaccgcaca
     4321 gacaggggcg cggaacgtta cctgaaggat gactggcacg gcctgcaact ttttgccatt
     4381 gatggcgcac agttcaggac acctgataaa cccgagctgc gtgaatatta tgggtctgcc
     4441 aacacatcca ctaagcggca gaacgcctac ccggttatgc gtctggtggc cttaatgaac
     4501 ctgggaagtc acattctgct gaatgccgtg accgcacctt accggcagag cgaaactgtg
     4561 ctggcccact ccatgctcgc caccatcccg gataactcta ttacgttgtt tgataagctt
     4621 ttttacagcg aagacctgct gctaacgctg aaccagaagg gttgtaaccg ccactggcta
     4681 ctgcctgcgt ggaagaatat cgcatcagaa atgatagagc tgggaaacac ggcgtcacca
     4741 gggaccatcc cgaaacgact ggagcatctt cggggtgctc tggaagtggt gttcataaca
     4801 aaacgccccc gaccatcaag gccgaggtcg gttaagatat caaaaacccg ttatcctgtg
     4861 aaacatagtg ccgctcctct taagtgaacg gcattgccct tctggggccg tattttttgt
     4921 ttacccaaag taacttttcc ataaaccgac agcattagcc ttcatcatat ttgcgacgat
     4981 gtataacgcc taaacacagg gatattgtac tttacaggtc acaagtcaac gtcggtgctt
     5041 aagagccctg tgaggcgtat agcggcgtta aaaaactgcc gagaagggta tatagcccgg
     5101 aagaagtgcg taaaacgaac tgacaggata aaagtgccct gctcaccctg tcagtaaaga
     5161 aattcttatt aatcgtggcg atgcctttcc tgaatagccg ttaatgagcc gacttgtaac
     5221 gcctctttat agtgtttacg gcatacagaa acgtatcgtt cattatcacc aattaccacc
     5281 tgctcacctt cgttataagg tctgcctgct tgatcaagac gcagcaccat gcttgcttta
     5341 cggccacaaa aacagatggt ttttaattca accagtttgt cggaccatgc cagtaagtat
     5401 tggctgccaa taaataattc acctcgaaaa tcggtacgta aaccataaca aagtacgggt
     5461 atatcgagtt gatcgacaac ctccgataat tcatatactt gttgtctggt taaaaactgg
     5521 cattcatcaa ccagtacgca atgaattgcc tgctgttcat gttccgcacg aatctcatca
     5581 aataatgatg aattttggtt aaataatttt gcaggcgatg acaaacctat acgcgaactg
     5641 actttcccgg caccaaagcg atcatcaatt tctgccgtat atacgacagt gcgcatgccg
     5701 cgttcttggt aattatatga agattgcaac aatgctgtag acttacccgc attcattgcg
     5761 gaatagtaga aatatagctg tgccatcagc cacaggccct caatgatatg aaataaagtt
     5821 ggctggagtt tatcataatt cgtcagtttt tcagctcaac agtatgcaca gaagtgggta
     5881 tatgcgttct cccttacgaa gccttgcata atccttctga gctatcatta caactgcctc
     5941 gcttgttata agcgggtaaa tgactgctgg taactattca caatctttaa cctgttgcgc
     6001 aagtaatagc cctctgttga cctccaggag atagtgcaat actaagtcca tgctcttatt
     6061 gcgactgttc tacttttcat cattcgctta atagggaatt ctcgtaaaca caactaatac
     6121 agaagactga aaggtcgtca gcctacgata atctccccat aaaatgtgac atgaatcagg
     6181 aagttttaac ctcacgtgct gcgaaatcat cggtgtaaat agggctatat gccgcgtctt
     6241 ttctggctaa ttttatgaaa agatatttat tggcggcaca aaataaagaa caattttgaa
     6301 ttccttacat tcctggctat tgcacaactg aatttaaggc tctattatta cctcaacaaa
     6361 ccaccccaat ataagtttga gattactaca atgagcgaag cacttaaaat tctgaacaac
     6421 atccgtactc ttcgtgcgca ggcaagagaa tgtacacttg aaacgctgga agaaatgctg
     6481 gaaaaattag aagttgttgt taacgaacgt cgcgaagaag aaagcgcggc tgctgctgaa
     6541 gttgaagagc gcactcgtaa actgcagcaa tatcgcgaaa tgctgatcgc tgacggtatt
     6601 gacccgaacg aactgctgaa tagccttgct gccgttaaat ccggcaccaa agctaaacgt
     6661 gctcagcgtc cggcaaaata tagctatgtt gacgaaaacg gcgaaactaa aacctggact
     6721 ggccagggcc gaactccagc tgtaatcaaa aaagcaatgg atgagcaagg taaatccctc
     6781 gacgatttcc tgatcaagca ataatctttt gtagattgca attgcttaaa atcccgccat
     6841 cggcgggatt ttttattgtc cggtttaaga caatttaata agaataagct ataaaaaaac
     6901 ggcgtcgatt gttcaacgcc gtttcgtgga taacaccgat atggatgtta cttcttaatg
     6961 cccatctctt cttcaagcca ggctttaaat tccgtgccaa gggtgttatg acgaataccg
     7021 tattcaacga aggcctgcat gtaacctaat ttattaccgc agtcatggct cttccctttc
     7081 atatgatagg cttccaccgt ttctttttcg atcagcatat caattgcgtc ggtgagctga
     7141 atttcatcac cagctcccgg aggggttttt gccagcaacg gccaaatatc cgcgctaagt
     7201 acgtaacgac ccacaatagc gagattagac ggcgcaacat ccgctttcgg tttttctacc
     7261 acaccaacca tcggtacact ttcacccggc gctaattcaa cgcctttgca atccacaacg
     7321 ccatatgcgg tcacatcagc aacctgttca accatgatct ggctatgacc cgtttcatca
     7381 aagcggcgga tcatctctgc taggttatcc tgtgacaaat cggattcata ttcatccaga
     7441 ataacatcag gcaaaataac agctaccggt tcatcaccca ctaccgggtg agcacacaat
     7501 accgcgtgtc ccaggccttt cgccagcccc tgacgaactt gcataatagt cacgtgcggc
     7561 ggacaaatag actgcacttc atcaagcagt tgacgtttta cacgtttttc cagcattgct
     7621 tccagttcaa aactggtatc aaagtggttt tcaatcgagt ttttagatga gtgcgtaacc
     7681 agcacaattt cagtaatgcc agccgcaata cattcattca cgacgtattg aattaatggc
     7741 ttatcgacaa gtggcagcat ctctttcggg atggctttcg tcgccggcaa catcctggtt
     7801 cctaatcccg caacggggat aacggctttt ttgactttcg tattaatggc agccatttaa
     7861 attctcctgg actgttcgtg ttttgaacgt gttcatattt ctgtatcgca tcccagtata
     7921 tcagcacccc gaaggggcta agttctgaaa aggaggcgag ttagcataat taagacaatt
     7981 acttatacga atggcgacga tagtaccacc agccgacatt agcaggtaat gcaaatttag
     8041 tccgcgttat cgtttgctca ttctgcagac aacatcaagc gcagtcgacc accagttccc
     8101 catatttggc attgccaggc atcgcatcgc tggctcaatt gattcaaata agcgttacct
     8161 aaagtgccta acggaacacc attactgatt tgcacctggt gttcgccggt atttaacgtc
     8221 gcattcagac ccgcagaaac cagaatgaga tttttcagtt cgcgatgata atagccaact
     8281 aatagcggaa actgccccgg cagattggcc tgacggagta aatggtttac ctgcttcaat
     8341 aacgcgccca gctctggcaa ccgttgattt tggtgtgcaa gctgttcctg taataatccg
     8401 ttaaacaatg cgcgtaataa caaggcagca agtacgccat tatgtccagc tcgggtgaca
     8461 tcaaggcaat aaaatgccag atcgttttcc gaaagtgcgg caatatcaag caccaggccg
     8521 ggtttgtccg cggcaaccaa ttgacgataa ttaacccggc aatgggaaat cacctgctga
     8581 accggcggtt gtagttcctg taataatttc gccgctgcgg cagggttatc aaccgttgca
     8641 tcccaatcgc gaaaaagcct ttcctcttcc tcaacgcgcg aattaaacat gctgggatag
     8701 agacaggcaa aaaccatctc gcgcaagcga ttcagatctt taactggttt cagcaaaaca
     8761 tcttcaacgc ccagacgtaa cgctttggca atatctgcca tattttcagt ggcagatatc
     8821 accagaactg gggtctggtc gcctctgtta cgtatatgct ccagcagttt aagcccgttc
     8881 attcgtggca tcgcgatatc acatatcatc aggtctggag tgaaacctcc cagcaactca
     8941 agggcatcca ccccatcagc cgccagtacc gttgtcgctc ccaatgagga aaaccatgaa
     9001 tccagaagcg agcgaaatac ctgctcatct tcaacaatga gaatctgttt tccgaccaat
     9061 ggctgcgtca tgttctctcc cctgactggc tttactcaat agtggcatgc tattgccacc
     9121 tgcgcctgtc agaattaact taagtgtaga taaaaattct ggtcaaatgt tggtgcgtac
     9181 caacggcaaa agttcgtcca ttttcctttc cactgccagc tgtccggccg caatggcagc
     9241 gtgcgcgcga tggaaatcaa gcgtagatat ttgcgggcaa acaggttgaa tcagaatatc
     9301 gggcggatca cctgccatgc ggttcctttt aaggcggttc tccagcacct ggatagaagt
     9361 ggtcataatc tctgttgccg ttggcgctgt caccgcccga cgtgttgtta tactgcctaa
     9421 cctttctttc agacgcgcat gccacggcaa agattcacca ttctcgctat tttcttcact
     9481 gacattaaag gagagcaaat cttgttgcat caaatgagca tcgtgctgca ggtcgaccgc
     9541 tatcacaata tcagccccca atgcacgcgt gagggaaata ggaattgggt taactactgc
     9601 tccatcaacc agccagtagc cgttatgtgc aacaggtgcc atgagtcctg gaatactgca
     9661 tgatgcgcga atagcaagat ggagatcgcc ttcagtaaac cataattcac gtcccgtact
     9721 taaattggtg gcaacagccg caaagcgacg ggaacaattt tcgatctctg tttccggcat
     9781 tatttcgcgg tattgattga agacacgctc gccgcgcagt aacccaccgc gctgccagga
     9841 gagatccatc aggcgtaaaa catcccaata actgaaagag gtcacccaat cttccagcgc
     9901 agataatcga tcgcatgcat aggcagcgcc caccagcgaa ccaattgaac atcctgcaac
     9961 gatatcaatt tcaataccca ctttttttag cgcattaata acgccaatat gcgaccaacc
    10021 tctcgccgcg ccagatccca gcgccagccc tatttttatc tttctcatta ttcccgcaag
    10081 attcccctgg aatgcaatcg tagccacatc gctactgctc ggttaacata gtgcaactca
    10141 ggcggttaat acgccgttat tgtttccagg gagattattt gtgtctcagc tttgtccctg
    10201 tggtagtgct gtcgagtata gcctatgttg ccacccttat gtgtctggtg aaaaggttgc
    10261 acctgatcca gaacatctca tgcgttcgcg ttactgcgct tttgtgatgc aagacgcaga
    10321 ttatttaata aagacctggc atccctcttg tggagcagcg gcgttacgtg ccgaattgat
    10381 ggccggattt gcgcatactg aatggttggg attgaccgta tttgaacatt gttggcagga
    10441 cgccgacaat atcggatttg tcagttttgt tgctcgattt accgaaggtg gcaaaacagg
    10501 tgcaataatt gaacgttcgc gatttttgaa agaaaacggt caatggtact atattgacgg
    10561 tacacgtccg cagtttggtc gcaacgatcc ctgcccttgt ggttcaggta aaaaatttaa
    10621 aaagtgctgc ggccaataat ggttgacggt acggtttagc aaacactctc aacaaggttt
    10681 ttccagcaat gcattcactc caacgtaaag ttctgcgtac tatttgtccg gaccaaaaag
    10741 gtctgatcgc acgtattacc aatatttgct acaagcacga gttaaatatc gtacagaaca
    10801 atgaatttgt tgatcaccgt accgggcgct tttttatgcg cacggaactg gaagggattt
    10861 ttaatgattc caccctgctg gcggatctcg atagcgcatt gccagaaggc tccgtgcgtg
    10921 agctgaatcc tgccggtcgt cgccggatag tgattctggt cactaaagaa gcgcattgcc
    10981 ttggcgattt gttgatgaaa gccaattacg gcggcctgga tgtcgaaatc gcggcagtta
    11041 ttggtaacca cgatacttta cgttctctgg ttgagcgttt tgatattccg tttgagctgg
    11101 taaaccatga agggttaagc cgcaacgagc acgatcaaaa gatggcagac gccattgatg
    11161 cttataaacc tgactatgtg gtgctggcga agtatatgcg ggtattaacg ccggaatttg
    11221 tggcacgctt cccgaataaa atcatcaata ttcaccattc attcctgcct gcgtttatcg
    11281 gcgcacgtcc ttatcaccag gcctatgaac gtggtgtgaa gattattggc gcaaccgctc
    11341 actatgtgaa tgacaatctg gacgaaggcc caatcatcat gcaggacgtt attcatgtcg
    11401 atcataccta cacagctgaa gatatgatgc gcgcaggtcg tgacgtcgag aaaaacgtct
    11461 taagtcgtgc gctatacaaa gtactggcac agcgcgtctt tgtttacggt aatcggacga
    11521 ttattcttta atcgccagca aaaataactg gttaccttta atccgttacg gatgaaaatt
    11581 acgcaaccag ttcatttttc tcaacgtaac actttacagc ggcgcgtcat ttgatatgat
    11641 gcgccccgct tcccgataag ggagcaggcc agtaaaaagc attacccc
//
LOCUS       DADMHC010000124        11480 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.124, whole genome shotgun sequence.
ACCESSION   DADMHC010000124 DADMHC010000000
VERSION     DADMHC010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11480)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11480)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11480
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.124"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..193)
                     /locus_tag="JNZ57_002757"
     CDS             complement(<1..193)
                     /locus_tag="JNZ57_002757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4754 domain-containing protein"
                     /protein_id="HAY8828922.1"
                     /translation="MGKEYKTLINKALERFYFRLSASGAHAERAARDSLTRAIRSLYD
                     VAFYADDLDALNELSELICA"
     gene            complement(205..492)
                     /locus_tag="JNZ57_002758"
     CDS             complement(205..492)
                     /locus_tag="JNZ57_002758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828923.1"
                     /translation="MTKDHAQGVFIRFIDFRGELLLRASAIDGVTPAGKNGADEATYV
                     YLNGTRLLVELPYQTVREIISEAEKARQVNGDEPYIEIICMDSEAEIQKAD"
     gene            complement(503..841)
                     /locus_tag="JNZ57_002759"
     CDS             complement(503..841)
                     /locus_tag="JNZ57_002759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001705126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4761 family protein"
                     /protein_id="HAY8828924.1"
                     /translation="MLKQRRNFRTGTERHANRFTTSASRSNIRYSLSDTHATQDGYPV
                     KQIGEHTWLIEKAGIVIHKCPRNPFTGNRIFALSCGDNQCGQDFTLYEALRTIDRLLR
                     GQSFIKQTDL"
     gene            complement(856..1134)
                     /locus_tag="JNZ57_002760"
     CDS             complement(856..1134)
                     /locus_tag="JNZ57_002760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001151410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HAY8828925.1"
                     /translation="MAKVLNTHEQADFERLAAFYPYRDEHGLPVLEESLKDYAKRTNQ
                     AVNTVKRQADRGSIPINQDEKNSRRTVNLFALFLKTIRSAEKYVQMTK"
     gene            1231..1539
                     /locus_tag="JNZ57_002761"
     CDS             1231..1539
                     /locus_tag="JNZ57_002761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000904671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY8828926.1"
                     /translation="MLIGEKIRVIRESEDLTREEFCGLIDVPIGTLRRYETGRIENIG
                     GEVLIKIVNHPRFFKYMNWLMTGKTNEAAGQISPSLSPDGPENTSSSQKSRKTGTQPG
                     "
     gene            1628..2566
                     /locus_tag="JNZ57_002762"
     CDS             1628..2566
                     /locus_tag="JNZ57_002762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001247211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY8828927.1"
                     /translation="MCPEGRKGKRIRKKFKTKSDAVLYERWVLAQQHNNEWKGNSIDR
                     RPLSVLIDLWWKYHGQLMKSGHNTRLKLLRLSEAMDDPCVHKLNTTMLTELRVSRIEQ
                     GIQPSTINREIGALSAMFTALISSGHFLNDNPVQGLKGMKVKEREMGYLSKSECVQLL
                     DALAENPDERLAVEILLSTGARWGEVAALEQRRVLHCRITFSKTKNSKNRTVPISESL
                     FEKIKKRGGKLVFPTLDYSLVRDVIKTVAPDVPDGQAVHALHHTFASHFMMNGGNILT
                     LQKILGHAKIQTTMIYAHLAPDYLQDAVRFNPLGGA"
     gene            2569..2931
                     /locus_tag="JNZ57_002763"
     CDS             2569..2931
                     /locus_tag="JNZ57_002763"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828928.1"
                     /translation="MKFHLDELKRMATLDNFARFLNESSTNEKCLSCGDTDMYMYLTN
                     IVEVGPEPKTAEECDLGTFVMLDYIGPFTGYPGYEGHDRENIHNYEFRLTCNRCGFVH
                     RYSARAFMNWVGKQGDEK"
     gene            3039..3368
                     /locus_tag="JNZ57_002764"
     CDS             3039..3368
                     /locus_tag="JNZ57_002764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000997174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828929.1"
                     /translation="MNDDLERRVSCLESDVTEIKNNLITLTTRSESFATKSDVLEIRE
                     GLRLEMAESRQSLKSEMADLRQSLKVEMAEHRTELQKSFANQTWLLTGIVLSAMAVLV
                     AVVTVIK"
     gene            3577..4557
                     /gene="btuC"
                     /locus_tag="JNZ57_002765"
     CDS             3577..4557
                     /gene="btuC"
                     /locus_tag="JNZ57_002765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter permease BtuC"
                     /protein_id="HAY8828930.1"
                     /translation="MLTLARQQQRQNIRWLLCLSVLMLLALLLSLCAGEQWISLGDWF
                     TPRGELFVWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLI
                     AAVLLGQGQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALM
                     TWAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWICCQSRPMNMLALGE
                     ISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILRLCGLTDHRVLL
                     PGCALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLLKARR"
     gene            4620..5171
                     /gene="btuE"
                     /locus_tag="JNZ57_002766"
     CDS             4620..5171
                     /gene="btuE"
                     /locus_tag="JNZ57_002766"
                     /EC_number="1.11.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional thioredoxin/glutathione peroxidase"
                     /protein_id="HAY8828931.1"
                     /translation="MQDSILTTVVKDIDGEVTTLEKYAGNVLLIVNVASKCGLTPQYE
                     QLENIQKAWADRGFVVLGFPCNQFLEQEPGSDEEIKTYCTTTWGGTFPMFSKIEVNGE
                     GRHPLYQKLIAAAPTAVAPEESGFYARMVSKGRAPLYPDDILWNFEKFLVGRDGLVIQ
                     RFSPDMTPEDPIVMESIKLALAK"
     gene            5171..5920
                     /gene="btuD"
                     /locus_tag="JNZ57_002767"
     CDS             5171..5920
                     /gene="btuD"
                     /locus_tag="JNZ57_002767"
                     /EC_number="7.6.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter ATP-binding protein
                     BtuD"
                     /protein_id="HAY8828932.1"
                     /translation="MSIVMQLQDVAESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLA
                     RMAGMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFAMPVWHYLTLHQHDKT
                     RTELLNDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEP
                     MNSLDVAQQSALDKILSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRRE
                     EVLTPPNLAQAYGMNFRRLDIEGHRMLILTI"
     gene            5998..6462
                     /locus_tag="JNZ57_002768"
     CDS             5998..6462
                     /locus_tag="JNZ57_002768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase"
                     /protein_id="HAY8828933.1"
                     /translation="MRFCLILITALFLAGCSHHKAPPPNARLSDSITVIAGLNDQLQS
                     WHGTPYRYGGMTRRGVDCSGFVVVTMRDRFDLQLPRETKQQASIGTQIDKDKLLPGDL
                     VFFKTGSGQNGLHVGIYDTNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI"
     gene            6709..7422
                     /gene="ydiV"
                     /locus_tag="JNZ57_002769"
     CDS             6709..7422
                     /gene="ydiV"
                     /locus_tag="JNZ57_002769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-FlhDC factor"
                     /protein_id="HAY8828934.1"
                     /translation="MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIP
                     TSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLERDNYAG
                     ELLKYPFIELLINEYYPHLNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFT
                     RVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTAEILAQITPFDFHAL
                     QGCLWPAVPINQITTLVQR"
     gene            7485..8921
                     /locus_tag="JNZ57_002770"
     CDS             7485..8921
                     /locus_tag="JNZ57_002770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiU family protein"
                     /protein_id="HAY8828935.1"
                     /translation="MTLSFVTRWRDELPETYTALSPTPLNNARLVWHNTELANTLSIP
                     SSLFKNGAGVWGGEALLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTM
                     DWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE
                     TAEPGAMLMRVAPSHLRFGHFEHFYYRRESEKVRQLADFAIRHYWSHLEDDEDKYRLW
                     FSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD
                     HQGRYSFDNQPAVALWNLQRLAQTLSPFVAVDALNEALDSYQQVLLTHYGQRMRQKLG
                     FMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLRDEFIDRAAFDDW
                     FARYRGRLQQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMMELHRLHEAL
                     RNPFSDRDDDYVSRPPDWGKRLEVSCSS"
     gene            complement(8925..9116)
                     /gene="hemP"
                     /locus_tag="JNZ57_002771"
     CDS             complement(8925..9116)
                     /gene="hemP"
                     /locus_tag="JNZ57_002771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemin uptake protein HemP"
                     /protein_id="HAY8828936.1"
                     /translation="MRYADSRKLTPETDANHKTASPQPIRRITSQTLLGPDGKLIIDH
                     DGQEYLLRKTQAGKLLLTK"
     gene            complement(9248..10294)
                     /gene="aroH"
                     /locus_tag="JNZ57_002772"
     CDS             complement(9248..10294)
                     /gene="aroH"
                     /locus_tag="JNZ57_002772"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroH"
                     /protein_id="HAY8828937.1"
                     /translation="MNRTDELRTARIESLVTPAELALRYPVTPGVATHVTDSRRRIEK
                     ILNGEDKRLLVIIGPCSIHDLTAAMEYATRLQSLRNQYQSRLEIVMRTYFEKPRTVVG
                     WKGLISDPDLNGSYRVNHGLELARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGA
                     IGARTTESQIHREMASALSCPVGFKNGTDGNTRIAVDAIRAARASHMFLSPDKNGQMT
                     IYQTSGNPYGHIIMRGGKKPNYHADDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRR
                     QLEVCEDICQQIRNGSTAIAGIMAESFLREGAQKIVGGQPLTYGQSITDPCLDWEDTE
                     RLVEKLASAVDTRF"
     gene            complement(10451..11284)
                     /gene="ppsR"
                     /locus_tag="JNZ57_002773"
     CDS             complement(10451..11284)
                     /gene="ppsR"
                     /locus_tag="JNZ57_002773"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="posphoenolpyruvate synthetase regulatory
                     kinase/phosphorylase PpsR"
                     /protein_id="HAY8828938.1"
                     /translation="MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVE
                     NESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRAIILQSEGFCQDIVQALVAPLQQ
                     EMKLDPTPIAHRTHGLNPNNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSR
                     CGKTPTSLYLAMQFGIRTANYPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIR
                     EERRENSRYASLRQCRMEVAEVEALYRKNQIPWINSTNYSVEEIATKILDIMGLSRRM
                     Y"
BASE COUNT         2820 a         2598 c         3007 g         3055 t
ORIGIN      
        1 cggcacagat cagctcggaa agttcgttaa gtgcatccag atcatcagcg taaaaagcca
       61 cgtcatacag acttcggatt gctctggtca atgagtcacg ggccgcacgt tcagcatgag
      121 cgcctgatgc acttaagcga aaataaaaac gctcaagtgc tttgttaatg agagttttat
      181 attctttgcc catcacaacg ccctttaatc tgctttctgt atttcagctt ctgaatccat
      241 acaaataatt tcgatatagg gttcatcgcc attaacctgg cgtgcctttt cagcttcgct
      301 aatgatttct cgtacggtct ggtacggaag ttccacaagc agtcgcgtgc cgttcagata
      361 aacgtaagtg gcttcgtcgg ctccgttttt acccgccgga gtcactccgt caatagcgga
      421 tgcacgtaat aacagttcac cgcgaaaatc aataaaacgg ataaatacac cttgtgcatg
      481 gtctttggtc ataaagcacc tgttataaat cagtctgttt aataaaactt tgcccgcgaa
      541 gcagacgatc aatcgtgcga agtgcttcgt ataatgtgaa atcctgcccg cactgattgt
      601 cgccacagct caatgcaaaa atgcggtttc cggtaaacgg attgcgtggg catttgtgga
      661 tcacgattcc agctttctca atcagccagg tgtgctcgcc gatttgtttt actgggtagc
      721 catcctgcgt tgcgtgtgta tcactcaggc tgtagcggat gttgctgcgt gatgcactgg
      781 tagtgaaacg gttagcgtgg cgttctgttc cggtacgaaa attacggcgt tgcttcagca
      841 taaaatgaca cctcgttatt ttgtcatctg cacgtatttt tctgcgctcc tgattgtttt
      901 caggaaaaga gcgaagagat ttactgtgcg tcttgagttc ttttcatctt ggttgatggg
      961 aattgaacct ctgtcagcct gtcttttcac tgtgttaaca gcttggttgg tacgctttgc
     1021 gtaatctttc aggctttctt caagtactgg taacccatgc tcatcgcggt agggatagaa
     1081 cgctgctaaa cgctcaaagt ctgcctgttc gtgtgtgttc aggacttttg ccatgtgtga
     1141 taacctgcgc tatctgtggt tgtttgtgac ttggtgtgct tataagtaca ccttgtgcgc
     1201 aagcttagtg tacttatagg gacactgtca atgcttatcg gtgaaaaaat tagagtgatt
     1261 cgtgaatcag aggatttaac gcgcgaagaa ttttgcggcc tgattgatgt gcctatcggc
     1321 actttgcgtc gttatgaaac ggggcggatt gaaaacatag ggggcgaagt gcttatcaag
     1381 attgttaatc accctcgctt ttttaagtac atgaattggc ttatgacggg aaaaacaaat
     1441 gaggctgctg ggcagatcag tccctctctc tcccctgatg ggccagaaaa cacatcgtct
     1501 tctcaaaaat cccgcaagac tggtacacag cccggctaat catagaacgc tgggggcatg
     1561 gtggtcttgt aacgctgggg tttcacgaat gagcataaaa tcaattctgg gagggtatct
     1621 tcttgacatg tgccctgagg ggcgtaaagg caaacgcatt cgcaaaaaat ttaaaacgaa
     1681 atcggatgca gttttatatg agcggtgggt gctggcgcaa cagcataaca atgagtggaa
     1741 aggaaactct attgatcgcc gtcctctgtc agtgcttatt gacttgtggt ggaaatacca
     1801 cggccagcta atgaagtcag ggcataacac gcgccttaaa ttgctgcgct tgagtgaagc
     1861 aatggatgac ccgtgcgtgc ataaacttaa tacaacgatg ctcaccgagc tacgtgtgtc
     1921 caggatagag caggggatac agcccagcac cataaatcga gagattgggg cgttaagcgc
     1981 gatgtttacc gcactcatct catccggcca ttttcttaac gataaccccg ttcaaggcct
     2041 taaaggaatg aaggttaagg agcgcgaaat gggatatctg agtaagtctg aatgtgttca
     2101 gttgctggat gcactggctg aaaatcccga tgaacgactg gctgtcgaaa tccttctgtc
     2161 gaccggggcg cgatggggcg aggtagcggc actggagcag cgccgtgttc ttcattgtcg
     2221 aatcactttt tcaaaaacga agaacagcaa aaaccgtacc gttcctattt ctgaaagcct
     2281 gtttgaaaag atcaaaaaac ggggcgggaa actggtgttt ccgacgctgg attattcatt
     2341 ggttcgcgat gtcatcaaaa cggtcgcacc tgatgttcct gacggccagg ctgttcatgc
     2401 gctgcaccac accttcgcca gtcatttcat gatgaacggc ggcaatattc tgacgctcca
     2461 gaaaattctg gggcacgcaa agattcagac aacgatgatt tatgcccatc ttgcgccgga
     2521 ttacctgcag gatgcggtga ggtttaatcc actaggaggt gcttaagagt gaagtttcat
     2581 ttagatgaac ttaaaagaat ggcaacgctc gataattttg cgcgttttct caatgagtcg
     2641 tctacgaatg aaaaatgttt gtcgtgtggc gatacggata tgtacatgta tttgacgaat
     2701 attgttgagg tggggcctga gccgaaaact gctgaggagt gtgatttagg cacttttgtt
     2761 atgcttgatt acatcggtcc atttactggg tatccgggat atgagggaca tgatcgggaa
     2821 aatatccata actatgaatt ccgacttacc tgtaacagat gtgggtttgt tcatcgttac
     2881 tcggcccggg cctttatgaa ctgggtaggc aagcagggtg atgagaagtg atggcagaga
     2941 atgttgcaca tatttcgcgg ttcagaaaaa agaaagagaa tgcctataat gtatccaaca
     3001 accaagtaac aggaagtggt aatgatggag gtgatggcat gaatgacgac cttgaacggc
     3061 gggtcagttg cctggaaagt gatgtgactg aaatcaaaaa caacctgatt actctcacta
     3121 caagaagcga atcctttgct accaaatctg atgtactgga gattcgcgaa gggttgaggc
     3181 ttgagatggc agaatcgcgc caatccctga agtctgagat ggctgattta cgccagtctc
     3241 tgaaagttga gatggctgag catcgtactg aacttcagaa atcatttgca aatcagactt
     3301 ggttactcac aggtattgtc ctgtctgcga tggccgtgct tgtggctgtg gttactgtta
     3361 ttaagtaaat ttatggcggc gatatgatcc acaaagtgac cacatccctg ttatttgttg
     3421 tggttggctg tgtttttgtg tgtctgtaag tctttgataa ttatctaact tgttgatttt
     3481 tacttgtgtt tatggccgct ctgcggcctt ttttcttttc actgtcgaag agtcaccgta
     3541 aaatcaacgc catgacactt cagcagaacg gataccatgc tgacacttgc ccgccaacaa
     3601 cagcgacaaa atattcgctg gttattatgc ctgtcagttt tgatgctgct ggcgcttctc
     3661 ttaagccttt gcgccggtga acaatggatc tcgctaggtg actggtttac tcctcgtggc
     3721 gaactgttcg tctggcaaat tcgcctgcca cgtacgctgg ctgtattgct ggttggtgcg
     3781 gcgctggcta tatccggcgc tgtaatgcag gcgttgtttg aaaatcctct ggcagaacct
     3841 ggactacttg gggtctctaa cggcgcaggc gtggggctta tcgccgcggt attgcttggg
     3901 caagggcaac tccccaactg ggcgctaggg ctgtgtgcga ttgctggcgc gcttatcatc
     3961 actttaatac tcttacgttt cgcccgtcgt catctttcga ccagtcggtt attgctggct
     4021 ggcgttgcat tagggattat ctgtagcgca ctaatgacgt gggctatcta cttttccacc
     4081 tctgttgatt tacgtcagct gatgtactgg atgatgggcg gttttggcgg cgtagactgg
     4141 cggcaaagct ggctgatgct ggcattgatc cccgtgttgt tgtggatctg ttgtcagtcc
     4201 aggccgatga atatgttagc acttggcgag atctcggcgc ggcaactggg tttacccctg
     4261 tggttctggc gcaatgtgct ggtggccgcg accggctgga tggttggcgt cagtgtggcg
     4321 ctggcgggtg ctatcggctt tattggtctg gtgatcccac atattcttcg gttgtgtggt
     4381 ttaaccgatc atcgcgtatt acttcccggc tgcgcgctgg caggggcgag cgcattgctg
     4441 ctggccgata ttgtagcgcg cctggcatta gctgccgcag agctgcctat tggcgtggtc
     4501 accgcaacgt tgggtgcgcc ggtgtttatc tggttattgt taaaagcaag acgttagccg
     4561 caaaaagacg gtctatgatt aaaagctaag atttttactg accacaccca ggagaaacga
     4621 tgcaagattc cattctgacg accgtagtga aagatatcga cggtgaagtg accacgctgg
     4681 agaagtacgc cggtaatgtg ctgttgattg tcaatgtcgc ctcaaagtgt ggcttaacgc
     4741 cgcaatatga gcagttggag aatattcaga aagcctgggc cgatcgaggt tttgtggtgc
     4801 tgggattccc gtgcaaccag tttctggaac aagaaccggg cagcgatgaa gagattaaaa
     4861 cttactgtac caccacatgg ggggggacgt tcccgatgtt cagtaagatt gaagttaacg
     4921 gcgaaggacg ccatccgctg tatcaaaaat tgattgccgc agcgccgacc gcagtcgcgc
     4981 cggaagagag cggattctat gcccgtatgg tcagcaaagg tcgtgcaccg ctgtaccctg
     5041 atgatatttt atggaatttt gagaaatttt tagttggcag ggacggattg gtcatccagc
     5101 gtttttcccc ggatatgacg ccggaagacc ccattgtgat ggaaagcatt aaactggcgt
     5161 tggcaaaata atgtctattg tgatgcagtt acaggatgtt gcggaatcta cccgcctggg
     5221 gccactttct ggcgaggttc gggctgggga gatcctgcac ctggtggggc cgaatggcgc
     5281 gggtaagagt accttgcttg cacgaatggc cggaatgacc agcggtaagg gaagcattca
     5341 gttcgcgggg caacccctgg aagcatggtc cgcaacaaaa ctcgcgctgc atcgcgccta
     5401 tctttcacaa cagcagacgc cgccgtttgc aatgccggtc tggcactacc tgacactgca
     5461 tcagcacgat aaaacgcgta ccgaactact gaatgatgtc gcaggggcgc tggctcttga
     5521 tgacaaactc ggtcgtagca ccaatcaact ttccggcggt gaatggcaac gcgtacgtct
     5581 tgctgcggtg gtgttgcaaa tcacaccaca agccaatccc gcaggccaat tgctgcttct
     5641 tgatgagccg atgaacagtc ttgatgttgc gcaacaaagt gcgttagaca aaattctgag
     5701 cgcgctgtgt cagcaaggac tggcgattgt gatgagcagt cacgatctca accacacgtt
     5761 gcgtcatgcg catcgggcgt ggttgctaaa aggtggaaaa atgctggcca gtggacgcag
     5821 agaagaggtg ctcacgccgc caaatctggc gcaggcctat gggatgaatt ttcgccgtct
     5881 ggatatcgaa ggtcacagaa tgctgatttt gaccatctga tttcattagt atcttgaaaa
     5941 tcgggtaatt acgacgctaa attaatgcaa gaataaaaaa cagaggaacc gtacggaatg
     6001 cgtttctgcc ttattttgat cacagcactg tttctggccg ggtgtagcca ccataaagca
     6061 ccgccgccaa atgccagact ttctgattcg attaccgtta ttgccggttt gaacgaccag
     6121 ctacaaagct ggcatggcac gccgtatcgt tatggtggca tgacgcggcg cggtgtggac
     6181 tgttcgggat ttgtggttgt gacgatgcgc gatcgtttcg atttgcagct gccccgtgaa
     6241 accaaacaac aagcctctat tggcacgcaa attgataaag acaagttgct gccaggtgac
     6301 ctggtctttt tcaaaacggg gtccggacaa aatggtttgc atgtaggtat ttacgatacc
     6361 aacaaccaat ttatccacgc ctctaccagc aagggagtga tgcgttcctc acttgataat
     6421 gtctattggc agaaaaattt ctggcaggcg agacgaatct agtatgtcga aaaatggacg
     6481 gcgatgatac atcgccgtcc atttactcct gaatacagta gtattttgca gacaaaaatt
     6541 ccgtaaatgg attattcgtt tataatcagg ataatctaaa aaaaggaccc ctgaaaaagt
     6601 ggttaacatg gaacaaatga aagttactcc ttctgtaatt gttatgtctt atggcctcat
     6661 cccttttagc cggatactga aaaacatcct tcgagaggga cggttaccat gaagattttt
     6721 ttggagaatc tttatcattc tgattgctat ttcctgccga taagagataa ccagcaagtc
     6781 cttgtcggcg ttgagttaat tacccatttc tccagtgaag atggcacggt gcgtatcccg
     6841 acgagtcggg ttatagcgca acttaccgag gagcaacatt ggcaattatt ttcagagcag
     6901 ttggaattac taaaatcatg ccaacatttt tttattcaac ataaactctt tgcctggctt
     6961 aatttaacgc cacaagtggc tacattatta ttagagaggg ataattacgc aggcgaacta
     7021 ttaaaatatc cgtttattga actgttgatt aatgagtatt acccgcatct caatgaagga
     7081 aaagataacc gcggtctttt atccttatcg caagtgtatc cccttgtgtt aggtaatttg
     7141 ggagcaggca atagcacaat gaaagcggtt tttgatggtc ttttcacccg cgtcatgctg
     7201 gataaaagtt ttattcagca acaaatcacg caccgctcct tcgaaccgtt tattcgtgcg
     7261 atccaggcgc aaatttcccc ttgttgcaat tgcatcattg cgggaggcat tgatacggca
     7321 gaaatattgg cacagattac ccccttcgat ttccatgctc tccagggatg cctgtggcct
     7381 gccgttccca taaatcagat aacgacgttg gttcagcgat aacccttctg tttgctggtg
     7441 tttaagacga gagtaaccgt ctacactatc aaacaggagg atctatgacc ctgtcttttg
     7501 ttacccgctg gcgcgatgaa ttgccagaaa cctatacagc actttcccct acgcctttaa
     7561 ataatgcccg gctggtttgg cataataccg aactggctaa cacgctgagt attccatcgt
     7621 cgctgtttaa aaatggcgca ggtgtctggg gcggcgaagc cctactgcct ggtatgtcac
     7681 cactggcgca ggtttacagt ggtcatcagt tcggcgtctg ggcgggccaa ctgggtgatg
     7741 ggcgcggcat tttactcggc gaacaactgc ttgctgatgg cactacaatg gactggcatc
     7801 tgaaaggtgc tggcctgacg ccttattcgc gaatgggtga tggacgggcg gttttacgtt
     7861 cgacgatacg agaaagtctc gccagtgagg cgatgcatta tctgggcatt ccgacgaccc
     7921 gcgcgttaag tatcgtcacc agcgattcgc cagtgtatcg ggaaacggcg gagccaggcg
     7981 cgatgctgat gcgtgtggca ccaagtcatc tgcgctttgg tcatttcgaa catttttact
     8041 accgccgcga gtcggaaaag gttcgtcagt tagctgactt tgctattcgt cattactggt
     8101 cacatcttga agatgatgag gacaaatacc gtctctggtt tagcgatgtt gtcgcacgta
     8161 ccgcgtcgtt aattgcccaa tggcagacgg tcggctttgc acatggggtg atgaataccg
     8221 acaacatgtc gctgctggga ctgacgcttg attacgggcc gtttggtttt cttgatgatt
     8281 acgaacccgg ttttatttgt aatcactcgg atcatcaagg gcgttatagc tttgataatc
     8341 aacctgctgt cgcgttgtgg aatttacagc gtctggcgca gacattgtca ccatttgttg
     8401 ccgtagatgc cctgaatgag gccctggaca gctatcagca ggttttgttg acgcattatg
     8461 gacaacggat gcggcagaaa ctgggcttca tgacggagca aaaagaggat aacgcgctac
     8521 tgaatgaatt attcagtctg atggcgcgag agcgcagcga ttatacccgc acattccgca
     8581 tgctgagtct gaccgagcag cacagcgcgg cgtcaccgct acgtgatgag tttattgatc
     8641 gtgcggcatt tgatgactgg tttgcccgtt atcgggggcg tttgcaacaa gacgaggtta
     8701 gcgatagtga gcgtcagcaa ctgatgcaaa gcgttaaccc agctctggta ttgcgcaact
     8761 ggttggcgca acgggcgatt gaagcggcag aaaagggtga tatgatggaa ttgcaccgcc
     8821 tgcatgaggc gttgcgaaat cctttcagcg acagagatga tgactatgtc agtcgtccac
     8881 ctgactgggg taaacggctg gaagtcagct gctcgagtta aaggctactt agttaacagc
     8941 agcttgccag cctgagtttt acggagcaga tattcttgcc cgtcatgatc gataatcagt
     9001 ttgccatccg gacctaacag tgtctggctg gtaattcgcc ggatgggctg cggggaagcg
     9061 gtcttgtgat tggcatccgt ttcaggcgtg agttttctgc tatccgcata acgcataaaa
     9121 attaataata attgatataa caatgattct tattatcaat attatggcag gccagagcaa
     9181 gcagtaatgt gttgagaaga caacaagttg cgcagaaatg cccatcccat caggaatggg
     9241 cacgcattca gaagcgggta tctaccgcag aggcgagttt ttcgaccagg cgttcggtat
     9301 cttcccagtc cagacacggg tcggtaatgg attgaccgta agtgagcggc tgaccgccga
     9361 cgattttttg cgctccttcg cgcaggaaac tttccgccat aattccagca atcgccgtag
     9421 agccattgcg gatttgctga caaatatcct cacaaacttc taactggcga cggtgctgct
     9481 tctggcagtt accgtggctg aaatccacca ccagatgttc aggtaaatca aactcgtgca
     9541 gcgtatcgca ggctgcggcg atatcatcgg catgataatt cggttttttg ccgccacgca
     9601 taataatgtg gccatacggg ttgccgctgg tctgatagat ggtcatctga ccatttttgt
     9661 ctggcgagag gaacatatgg ctagcgcggg ctgcgcggat agcatccacg gcaatccgcg
     9721 tgttgccatc ggtaccattt ttaaaaccta ccggacagga gagtgctgaa gccatttcgc
     9781 ggtggatctg actttcggta gtacgagcgc caatcgcgcc ccaactgatt aaatcagcaa
     9841 taaactgacc ggtcaccata tcgagaaact cagtcgcggt agggacaccc agctcattta
     9901 cctgtaaaag taatttgcgc gccagctcca gaccgtgatt tacccgatag ctgccgttta
     9961 aatccggatc ggagattagc cctttccagc cgacaacagt tcgtggtttt tcaaaatagg
    10021 tgcgcattac gatttccagc cgtgactggt actggttgcg cagcgactgc agacgggtgg
    10081 cgtactccat tgcagcggtg agatcgtgga tcgagcaggg gccaataatg accaacagtc
    10141 gcttatcttc accattcagt attttttcaa ttctgcggcg ggagtcggtg acatgggtgg
    10201 cgacgccagg cgttacggga taccgtagcg cgagttcggc gggcgttacc aggctctcaa
    10261 tacgcgcagt acggagttcg tcagttctgt tcattacaag tctcagaaat ttgttgcttc
    10321 tacggcagga ctaccgggaa gtgatgcgca tcacgataaa ccaatcgcag ctgatttcaa
    10381 gtgcgaggtg tgtcacacct agccgggtgg ttagcatgat aacaaaaaaa caaatcaacg
    10441 cactagttct ctagtacatt cggcgactaa ggcccatgat atcgaggatc ttggtggcaa
    10501 tctcttctac cgaataattg gtactgttaa tccacgggat ctgattttta cggtacaagg
    10561 cttccacttc cgcgacttcc attctgcact gacgaagcga ggcatagcga ctgttctccc
    10621 gacgttcctc gcgaatcgcc gccagacgtt ccgggtcgat agtcaggccg aacaatttat
    10681 gctgaagcgg tttgagcgac gcgggtagca ccagattatc catatcgtcg gcaataaagg
    10741 ggtagtttgc cgtgcggata ccaaattgca ttgccagata cagactggtg ggggttttac
    10801 cacagcgaga aacaccgagc aggatcacct gagcctgatc cagattgcgc aacgaaatgc
    10861 cgtcatcgtg ggcaagggtg taatcaatcg ccgcaatgcg cgcatcatat ttattgagat
    10921 tattagggtt aaggccatgg gtacgatgag caatcggcgt tggatccagt ttcatctctt
    10981 gttgtagcgg ggcaaccagc gcctgaacga tatcctggca aaagccttca ctttgcaaga
    11041 tgatggcgcg aatctccggc aacacgatgg agtagaagac cagcgggcgc acacctgtct
    11101 ggtgataaat tgcgtcaatc tgatccttca ctgcccgtgc acggctctca ttttcgacaa
    11161 acggcagcgt aatgctgctg atagtgacgg gaaattgtga cattactgcg tgtcctaata
    11221 cctccgcagt tattgccgta ccatcagaaa tataaaaaac gtggcgatca acagcattat
    11281 ccattttgtt cttcccgtga tgcagacata attctatgaa agcataaatt aaaaacgcac
    11341 agaagcgtag gaggtaatgt ctggtttata aaatgaacct tcaattttat tttttatgaa
    11401 aacagtattt catttttatg gtttcgttta taccgatggt ttatgtggaa attgtcgaat
    11461 agagcaggtt tgcgcaacgc
//
LOCUS       DADMHC010000125        11405 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.125, whole genome shotgun sequence.
ACCESSION   DADMHC010000125 DADMHC010000000
VERSION     DADMHC010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11405
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.125"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            1..922
                     /gene="gap"
                     /locus_tag="JNZ57_002774"
                     /pseudo
     CDS             1..922
                     /gene="gap"
                     /locus_tag="JNZ57_002774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310049.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
     gene            complement(964..2403)
                     /gene="aldA"
                     /locus_tag="JNZ57_002775"
     CDS             complement(964..2403)
                     /gene="aldA"
                     /locus_tag="JNZ57_002775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HAY8828939.1"
                     /translation="MSVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAE
                     DARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE
                     VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIA
                     RKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAG
                     NPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDS
                     RVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGLLINAAAL
                     ERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVV
                     AFDTLEEAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHA
                     GWRKSGIGGADGKHGLHEYLQTQVVYLQS"
     gene            complement(2600..3400)
                     /locus_tag="JNZ57_002776"
     CDS             complement(2600..3400)
                     /locus_tag="JNZ57_002776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HAY8828940.1"
                     /translation="MNITPFPTLSPATIDAINVIGQWLAQDDFSGEVPYQADCVILAG
                     NAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSVIAQHPHYNTIRTTGRAEATIL
                     ADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALFNQAVERVHTAIVVQDPTMQRRTM
                     ATFRRMTGDNPDAPRWLSYPGFVPQLGNNADSVIFINQLQGLWPVERYLSLLTGELPR
                     LRDDSDGYGPRGRDFIVHVDFPAEVIHAWQTLKHDAVLIEAMESRSLR"
     gene            complement(3672..7574)
                     /gene="hrpA"
                     /locus_tag="JNZ57_002777"
     CDS             complement(3672..7574)
                     /gene="hrpA"
                     /locus_tag="JNZ57_002777"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310042.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HAY8828941.1"
                     /translation="MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQ
                     DIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGET
                     GSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRF
                     SDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLP
                     RRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQ
                     AIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNR
                     VFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQAS
                     ANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAA
                     FPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLE
                     AQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLG
                     EQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHI
                     ALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGR
                     IAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQI
                     DPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEF
                     YDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGN
                     LKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPV
                     RRNFVPAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKIT
                     FRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYE
                     QKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEK
                     LPNKAKLGLYFNPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHEKVRAELN
                     DTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFK
                     RLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVK
                     EIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG"
     gene            7775..8380
                     /gene="azoR"
                     /locus_tag="JNZ57_002778"
     CDS             7775..8380
                     /gene="azoR"
                     /locus_tag="JNZ57_002778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent NADH-azoreductase"
                     /protein_id="HAY8828942.1"
                     /translation="MSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLA
                     ANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNIS
                     TQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTF
                     LGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVAA"
     gene            complement(8431..9747)
                     /locus_tag="JNZ57_002779"
     CDS             complement(8431..9747)
                     /locus_tag="JNZ57_002779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310040.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2/dual specificity phosphatase
                     family protein"
                     /protein_id="HAY8828943.1"
                     /translation="MITERRNVLLQGAGWLLLLAPFFFFTYGSLNQFTAVQDLNSHDI
                     PSQVFGWETAIPFLPWTIVPYWSLDLLYGFSLFVCSTTFEQRRLVHRLILATVMACCG
                     FLLYPLKFSFIRPEVSGVTGWLFSQLELFDLPYNQSPSLHIILCWLLWRHFRQHLAER
                     WRKVCGGWFLLIAISTLTTWQHHFIDVITGLAVGMLIDWMVPVDRRWNYQKPDQRRIK
                     IALPYVVGAGSCIVLMELMVMIQLWWSVWLCWPVLSLLIIGRGYGGLGAITTGKDSQG
                     KLPPAVYWLTLPWRIGMWLSMRWFCRRLEPVSKITAGVYLGEFPRHIPAQNAVLDVTF
                     EFPRGRATKDRLYFCVPMLDLVVPEEGELRQAVAMLETLREEQGSVLVHCALGLSRSA
                     LVVAAWLLCYGHCKTVDEAISYIRARRSHIVLKEDHKAMLKLWENR"
     gene            complement(9737..11405)
                     /locus_tag="JNZ57_002780"
                     /pseudo
     CDS             complement(9737..11405)
                     /locus_tag="JNZ57_002780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415928.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional alpha/beta hydrolase/class I
                     SAM-dependent methyltransferase"
BASE COUNT         2848 a         3092 c         2707 g         2758 t
ORIGIN      
        1 agacgttgtc gctattaatg atctcacttc cccaaaaatt ctcgcctacc tgctgaaaca
       61 tgattcaaac tacggaccat tcccctagag cgttgatttt acgaaagatt cacttatcgt
      121 tgatgggaaa agtatcgcgg tttacgccga aaaagaggct aaaaatattc cgtggaaagc
      181 gaaaggtgca gaaatcattg tcgaatgtac tggcttttat acctccgccg agaaatcgca
      241 ggcgcatctt gatgctggtg cgaagaaggt gttgatttcc gcccctgccg gtgaaatgaa
      301 aactatcgtt tataacgtca atgacgacac tctggatggc aacgacacca ttgtttccgt
      361 ggcgtcatgc accactaact gccttgcgcc gatggccaaa gccttgcatg acagtttcgg
      421 gatagaagtc ggcacgatga cgaccattca tgcctatact ggcacccagt cactggtgga
      481 tggcccacgt ggtaaagatt tacgtgcttc acgcgcagcg gcagaaaata tcattcccca
      541 cactacgggg gcggcaaaag ccattggtct ggagatcccg gaactgagcg gcaaactgaa
      601 aggtcatgcg caacgcgtgc cggtgaaaac aggttcggtc actgaactgg tatcgattct
      661 cggaaaaaaa gtgactgccg aagaggtgaa taacgcactt aaacaagcaa ccaccaataa
      721 cgagtcattt ggttataccg atgaagaaat agtctcttcc gatatcattg gcagccattt
      781 cggttcggtg tttgatgcta cgcaaacgga aattaccgcc gtgggcgatt tacaactggt
      841 gaaaacggtc gcctggtacg ataacgaata tggcttcgtc acgcagctta ttcgcaccct
      901 cgaaaaattc gctaaactct gacgcgtaca ggcggaggaa aaaacctccg cctcttttac
      961 tcattacgac tgtaaataaa ccacctgggt ctgcagatat tcatgcaggc catgtttacc
     1021 atctgcgccg ccaataccgg atttacgcca tccggcgtgg aagccttgca tagcttcgaa
     1081 gttttcacgg ttgatgtaag tttcaccaaa cttcagccct ttaatggctt tcatcgcgac
     1141 gttcagattt tgggtataga ttgatgaggt caggccgtaa tcactgtcat tagccattga
     1201 gatagcctct tccagcgtgt caaatgcgac caccggcaga accgggccaa aggtttcctc
     1261 atgcataatc gacatttctt ggcgaacatc cagcagcaat gtcggcggat aataatatcc
     1321 tttcccctct accgctttgc cacccaacgc cactctcgcc ccttcttcta ctgcgcgcgc
     1381 cactttttgc tcaacccttt ccaacgccgc ggcgttaatc aacagcccca tcgcaatgtc
     1441 gttgcgttca gcggggttac caaattgaac cgcctgcatc gcttcaccca gccgattgac
     1501 gaactgatca taaatgcctt tctgtacata aacacgttct gcacagttac acacttgccc
     1561 actattaatg acgcgtgaat caacgatggc tttgactgcc agttcaagat cggcatcgtc
     1621 cattacgata gctggtgctt taccccccaa ttccagacac actttggtga tgtttttcgc
     1681 cgcagtcgcc atgatcttct cacctgcaga gacgctgcct gtcatactga ccattgcgac
     1741 ctttgggtta cccgccagtt cttgcccaac ggtttcacca cgccccagta caaggttaaa
     1801 cacgccgcgc ggaaggccta tttcatcgac gattttggcg aatgcaatcg cattgtttgg
     1861 cgtaaattca ctaggtttaa tgacgatggt attaccggtc aaaagagcgg gagccatttt
     1921 gcgggcaatg aggaagaacg ggaagttcca cggcagaatg ccggtagtca caccaagcgc
     1981 acgtttaaac aaaagaatat tttctcctgg acgatcgctt tgaataatct cgccctcgta
     2041 acgccgtgcc cactccgcca tgtaatcgat atagtcggca gtaaaagcca cttcgacttc
     2101 agccagctgc tggatcttgc ccccttcttc aacaatcagc gcactgattt cactggcgcg
     2161 ttcgcggatc ccggcggaga ttttgcgcaa ccaactggcg cgttcaatag caggcaacgc
     2221 ttcccattct ggttgtgcac gttctgctgc atcgattgcc ttacgggcat cctcggcctg
     2281 accatcgggt atgcgggaaa tgacagcctc tgtagcaggg tttaccacat caatccatgc
     2341 gtctccacgc caggtaacaa actgtccatc gatatacata ggatgttgaa cgggtactga
     2401 catgggcgac tcctgtgatt tatatgtttg ttcttggtaa atacattgtt aattaacatc
     2461 aatcatcata gagacggcat cgtgaaagga caattctgtg aagggcttca taaaaacaag
     2521 tgtaaaagga ataaaaggca gaaataaaag tcaggagtca tgcccgtttg caaacaagtg
     2581 gttcacaaac gggcaatttt taacgtaacg agcgactttc catcgcctcg atgagcaccg
     2641 catcgtgttt aagcgtttgc catgcatgga tgacttctgc cggaaaatca acgtgaacga
     2701 taaaatctcg cccgcgggga ccgtagccat cgctatcatc gcgtaaacgc ggcagctcgc
     2761 cagtgagtag tgagagataa cgctcaaccg gccataatcc ttgtaactga ttaataaaga
     2821 ttacactgtc tgcgttattt cctaactgag gaacgaatcc gggataactt aaccagcgtg
     2881 gtgcatcggg attgtcccca gtcatacggc ggaacgtcgc catcgtgcgc cgctgcatgg
     2941 tggggtcctg aacaacgata gccgtatgaa ctcgttctac ggcctgatta aatagcgcga
     3001 tgctaaagcg tgcgttttca ccgcagtttg ttgactggtc ttcaatccag attttttcat
     3061 gcggaatgtg ccagaactga tgagcgatat ccgccaggat ggtcgcttct gctctgccag
     3121 tggtgcggat agtgttgtag tgcggatgct gtgcgatgac gctatacaaa aaagttgtcg
     3181 agtgaccgat accaccacta atcagtaaag gaatttgctg atcgcgagca atcttacatg
     3241 ccgcgtcgat agtcggcata accgcattgc ctgcaaggat cacgcaatcg gcctgatacg
     3301 gcacctcacc ggagaaatca tcctgcgcca gccactgtcc gataacattt atggcatcta
     3361 tagttgccgg cgaaagcgtc ggaaacgggg taatgttcat ggttcctcct tatcgttccc
     3421 ttaagaatac tgcgtgagat aatagtgaga agctgagcac tctgaaagga ggaagtcgta
     3481 tgtccttaac cgccactccg caagcctgac atatctttta aggaaatgct gtagataaac
     3541 attattcatc ttgcagcaga gaattgtatt tttctgaatt cctgaatttt tacccttacc
     3601 gttttagaat taataaaaaa cccggcgcta aatgcttacc gggttttaga tttattaggc
     3661 aaatagcagg gttaaccgct aatctgctcc atcgcctgca aaatacgctt atctgaaatc
     3721 ggataaggcg taccaagttg ttgagcgaag taactaacgc gcagctcttc tatcatccaa
     3781 cggatctctt tcacgtcttc atcctcacga cgtgcaggcg gcagtttgtt gatccattgc
     3841 tgccacgcct gctggacgtt ttcgactttc agcatctgtg cacgatcgcg atgtggatca
     3901 accgccagtt tttccagtcg tttttcaatc gcctgcaaat atcgcagcgt gtcgcccagc
     3961 cgtttgaagc cgttaccagt gacaaaaccg cgatatacca acccgcccat ctgcgcttta
     4021 atgtcagaaa gccccagtgc catggtcata tccacccgcc ctttcagacg tttgttgata
     4081 ttgaacactg ccgtaagaat ttgctcgacc tgcttcgcaa tatctaccac cgtgtcgttc
     4141 agttcggcac gcactttctc atgcagcgca gcaaagcctt cttccgtcca gaccgggcca
     4201 ccattggcgt cgatcagttg atccacaccg caggagatac agtcgtcgat cagctccagc
     4261 actttgccat acgggttgaa gtacagtccc agcttggctt tgttcggtaa cttttcatgt
     4321 aaatacttga tcggcgaggg aatatttagc agcagtagac ggcgaagacc attccacatt
     4381 gcctgttttt gctccagcgg gttatcaaac agtttgatcg ccacgctgtc gcgttcatcc
     4441 accagcgccg gccacgcctt cactttatag ttgccacgct tctgttcgta actttccggc
     4501 agctgaccaa aactccagat atgtaagccg ctctgctcga taccgtcatc cgccaccgcg
     4561 gacagcgttt cctgcacttt gcctttcagc gcatctttca gatcttgtag cgagcgccct
     4621 tcttttagct tcttgttttt gtcatccacc acgcggaagg tgattttcag gtgatcgggc
     4681 acctgatccc agtgccagtc ttcgcggtca acggtaacgc cggtcatccg ccgtaactcg
     4741 cgctcaaggc tgtcgagcaa cggtaactcc agcggtgtga cgcggcctaa aaacgcttcg
     4801 gcgtagtttg gtgcaggcac aaaattacgg cgtaccggtt tcggcaacga tttaatcaga
     4861 gcaatcacca attcgcggcg cagaccgggg atctgccatt caaacccgct ttcctcaacc
     4921 tggttaagta acggcagcgg aatatgtacg gtcacaccgt ccgcgtctgc gcctggctca
     4981 aactgatagc tcaaacgcag cttgagattg ccctgatgcc agaagttcgg gtaatccagc
     5041 ttgctgattt tttccgcccc ttctttgatc aacatgctct tttcaaagtt gagcaaatca
     5101 ggcgtttcgc ggctgacttt tttccaccag ctatcgaagt gacgagcgga gattacatcg
     5161 tggctgatgc gctggtcgta gaactcaaac agcgtttcgt catcaaccag aatatcgcgg
     5221 cgacgtgatt tgtgttccag ctcttccact tcggcccgca gtttcaggtt ttcacggaag
     5281 aatgcgtgac gcgtctgcca gtcaccttcc accagcgcat ggcgaataaa gagttcacga
     5341 cataacgccg gatcgatctg gctgtagttg accttgcgcg ctgcaacaat cggcaaacca
     5401 taaacagtga ctttttccgt tgccatcacc gcgccctgcg cccgttccca gtgcggttcg
     5461 ctgtaggtac gtttaatcaa atgctgagcg acaggctcca cccattccgg gtcgatacgc
     5521 gcagcaatgc gcccccacag gcggctggtt tctaccagtt ccgccaccat tacccatttc
     5581 ggcggttttt tgaataaacc agaaccgggg aagatggaga aacgcgcgtt acgtgcgccg
     5641 gtatattctt gtttatcggc atctttcatg ccgatatggg aaagtaaacc cgtcagcaac
     5701 gcaatgtgaa tttcgcgata ctccgccggt tcgctgttaa ccggaatgcc aagttctttc
     5761 accacctgac gcaactgggt gtagatatcc tgccattcgc gcacgcgcag atagttgaga
     5821 taatcggtac gacacaggcg acggaaggcg tttgaagaaa gcgccttttg ctgctcgcca
     5881 agataattcc acagatttac aaacgcgagg aagtcggatt ctttgtcgtg gaagcgacga
     5941 tgtttttcgt ccgatgcctg ctgtttgtcc atcggccgct cacgcgggtc ctgaatggag
     6001 agcgcggacg tgataatcat cgcctcacgc acgcagccat gtttctgcgc ttccagcacc
     6061 atacgcgcca gacgaggatc gaccggcagt tgcgagagct ggcgaccgag cggcgtcagt
     6121 ttataggcgc tggcctgttc atccgtggtg atcgcgccca gttcttcgag cagacgcacg
     6181 ccatcctgga tattgcgttt atccggtgct tcgacaaacg ggaacgcagc gatatcgccc
     6241 agccccagcg cggtcatctg caaaataacc gaggccaggt tggtacgcag aatctccgga
     6301 tcggtaaact ccgggcgcga gaggaaatcg tcttcggaat agagacgaat acagatccct
     6361 tcggacacac gaccacaacg gcctttacgc tgattggcag acgcctgtga aatgggttca
     6421 atcggcaaac gctgcacttt ggtgcgatag ctgtagcggc tgatacgcgc cgtaccgggg
     6481 tcgataacgt atttaatccc cggtacagtc agcgaggttt ccgcgacgtt ggtcgccagc
     6541 acaatgcgtc gcccgctgtg cgactggaac acgcggttct gttcgctatt cgaaagccgc
     6601 gcataaagcg gcaagatttc ggtatggcgt aagttcagct tgttcagcgc atcggcggta
     6661 tcgcgaattt cccgctcgcc gctcataaag atcagaatgt cgccagggct ttcctggctc
     6721 agttcgtcta cggcgtcaaa aatcgcctgc aactgatcgc gctcggtgtc atcggcttct
     6781 tcaacaatcg ggcgatagcg cacttccacc ggataggtcc gaccggagac ttcgataatc
     6841 ggcgcattat taaagtggcg agaaaagcgt tccgggtcga tagtcgcgga agtgataatg
     6901 atttttaggt caggacgccg cggcagcaac tctttcaaat agccgagcag aaaatcgata
     6961 ttcaggctgc gttcgtgtgc ttcgtcaata atgatggtgt cgtactgcat cagcaggcgg
     7021 tcttgctgga tctccgccag caggataccg tcggtcatca gcttgaccat cgtgttatca
     7081 cttacgtgat cgctgaaacg cactttgtaa ccgatgcaac cgcctggctc cgttttcagc
     7141 tcttccgcaa tacggttcgc caccgttctt gccgccagac gacgcggctg ggtatggccg
     7201 atcagtcctt taatcccgcg ccccagctcc atacagattt tcggtagctg ggtcgtttta
     7261 ccggaaccgg tttccccggc gacgatcacc acctggtgat cacgaatcgc ttcgagaata
     7321 tcctgttttt tctgactaac tggcaaattg tccggataag tgatttccgg tcgtgccgct
     7381 tcacgcagca ggactttccc tgccgcctgg tcaatctctt tcgccatctc ctggaaaatg
     7441 tcctgttgtg catcaggatt tttaaccttc ttaacaccat gcagacggcg agaaaaacgc
     7501 agtctgtcgc gcagcatcaa cgaatccagc cgctgctgca aagcagtaaa ggtcaatttt
     7561 tgttgttctg tcataacgtt agtgggcagt agtctgcctg attaattttc ttttaaatga
     7621 tagatataga gtaccacatc gcggctttct atgcgttgtt caataaattc gaacataggc
     7681 ttcgatttat tgcgctatct ctgtggcagg attgtgaata aagtgtcagc aagcaacggg
     7741 gcatcgccaa ttcaaacatc tataaggaaa caccatgagc aaggtattag ttcttaaatc
     7801 cagcatcctg gcagggtact ctcagtctaa tcagttgtcc gattattttg ttgaacaatg
     7861 gcgcgaaaag cactccgctg atgaaatcac cgttcgcgac ctggctgcaa atccgattcc
     7921 ggtactggat ggcgaactgg ttggcgctct gcgtccgagc gatgcgccgc tgactccgcg
     7981 tcagcaggaa gctctggcgc tttccgatga gctgattgcc gagctgaaag cccacgacgt
     8041 tatcgttatt gcggcaccga tgtataactt caacatctca actcagttga aaaactattt
     8101 tgacctggtt gcacgcgcag gcgttacttt ccgctatacc gagaacggtc cggaaggtct
     8161 ggtaacgggt aaaaaagcca tcgttattac cagccgcggt gggatccaca aagatggacc
     8221 aacggacctg gtgacgccgt atctgtccac gttcctcggc tttatcggca ttaccgatgt
     8281 gaaatttgtc ttcgccgaag ggatcgcata cggtccggaa atggcagcga aagcgcagtc
     8341 tgacgcgaaa gcggccatcg acagcattgt tgctgcataa ccggacacga tcttgatgtg
     8401 gactgtagtt cagtccacat ctcaatccac ttacctgttt tcccataatt tcagcatcgc
     8461 tttgtgatct tccttaagca caatatgcga acgtctggct cgaatataac taatcgcttc
     8521 atcaacggtt ttacagtgtc cgtaacataa caaccatgcc gccactacca gcgcactgcg
     8581 cgataatccc aacgcgcaat ggaccagaac gctgccttgc tcttcgcgta atgtttccag
     8641 catcgccacg gcctgtcgga gctccccctc ttccggaacc accagatcca gcatcggtac
     8701 acagaaatag agtcgatctt ttgtcgctcg tccccgaggg aattcaaagg tgacgtccag
     8761 aaccgcattc tgtgccggaa tatgtcgtgg aaactcccct aaataaacac cagcagtaat
     8821 tttgctcacc ggctccaggc gacgacaaaa ccaacgcata gacagccaca tcccgatgcg
     8881 ccagggcaat gtcagccagt aaacggcggg cgggagtttc ccctgactat ctttccctgt
     8941 tgttatcgcg ccaagcccac cgtacccacg gccaataatg agtagcgata atactggcca
     9001 acataaccag actgaccacc ataactgaat catcaccatt agctccatca acacaatgca
     9061 cgagcccgcg cctacgacat atggcagtgc tattttgatt cgacgttgat caggtttctg
     9121 ataattccaa cgacgatcga cgggcaccat ccagtcaatc aacataccta ccgccagccc
     9181 tgtgatgaca tcaataaaat gatgctgcca ggtcgtcaga gtagaaatag cgatgagtaa
     9241 aaaccatccg ccacagactt tacgccacct ctcagccaga tgctgacgaa agtgacgcca
     9301 aagtagccag cagagaataa tatgcagcga aggagactgg ttataaggca gatcaaacag
     9361 ttcaagttgc gaaaatagcc atcccgtcac cccactcact tcaggacgga taaaactaaa
     9421 cttcagcgga tagagcaaaa aaccgcagca ggccattacc gttgccagaa taagccggtg
     9481 gacaagtcgg cgctgttcga atgtcgtgct acaaacgaac agcgaaaatc catataaaag
     9541 atccagactc cagtaaggaa caatagtcca gggaagaaaa gggatcgccg tttcccaacc
     9601 gaatacctga ctggggatat catggctgtt aaggtcctga accgcggtga actgattaag
     9661 agatccatag gtgaagaaaa aaaacggggc cagcaacaat aaccagccag cgccttgtag
     9721 caatacgttc cgacgttcag ttatcacgac gcaccgccat cgaaaccgta aaaatacccc
     9781 actcatcaat ccgttgtgtg catttatcaa atccggcatc acgcacgagt gaatccatct
     9841 ccccttgcga acgcacgcgc attacccacg gtttaccatc tttatgactg gttaacaccc
     9901 cggcaatcat ctccagttga gggtgccacg gctgcccggt gtagatgaga atgccgaccg
     9961 gttcgatggc attggcaaga cctgcgagtg agttttttac ctgctcattt tcgggaaaaa
    10021 gctcatacag tccagagaca attgccagcg taggccgcgg agttaacgcg ctgagttcct
    10081 ccgggttaaa cgcatcgccc tgttcaaaac gcacccgccc agacattccc cgttgggcaa
    10141 tcatctcttg cccctgtgca acatttaact cgctgtaatc acgtaacaaa atatcgctta
    10201 cggcaggctc gtttgccagc gcatccagta catagcgccc atgccctgcg gcaatgtcaa
    10261 ccacgcggac ggctaaacct ttggcgtgga gatcggcaac ggcttgttta atcagtattt
    10321 gtaaatgggt tttgcgctgg cgaataccgc gccagccaac actgttcagg tagattttgt
    10381 cgattaagcg cccgaatgcg ttactacctt gcggttgatt ttgatagaca taatccagcg
    10441 aactgcctga atcaaagccg gtgctcattc cgagatgcag gcccgcagag tgcgtcccga
    10501 acaatttcat cgcctttcgc ataaagcgat acgctaaatc aaccggcgat aatggcacgg
    10561 gtccaccaga aagtagccgc cattgatccg ctgatggtcc tgtgcagtct tcatgctgat
    10621 aatcaaattt ttgcgatttg ttagcatata aacgactaat aaagctttgc attttttcaa
    10681 atgccagcgc cctgttctct tcacccaacg tgtcgtgata aaagcctggc agcagatgca
    10741 gctctttcag agggctacgt aatctctgat aaaaatcaat ctgcggttgg cgatgcacca
    10801 catagtcatc gcctgatatc agaagttgcg tggggagcgt aatcgccgcc gcatctttaa
    10861 taatacgttc agacgtttta tagagatcga gcaagatatt gacggcaatc gcccgtgtga
    10921 tcagcggatc attattgaaa ctcgccaccc gttgccgatc gtgggtcaaa tagcgtcctt
    10981 tcacatagga attaataaaa aacagaccac gcagacgatg ccataacgcc agcgcaggac
    11041 gtgccagcgg cacatacaat ttaaccttaa aggccggaga agccagcacc agcccgcgaa
    11101 ttgcaggcgc ataatcatga acctatgtgg caaccagcac tgcgccgacg ctttgcgcga
    11161 tcacaaccac ctcttccagt ccaacctagc tgtcgctggc agcaaaacgg acaaattcat
    11221 cgacatcctg cactgaacgc gcaagagatg ggctataacc acgcggcccc gaagtttttc
    11281 catgcccccg ggcatcccat gcataaaaag cagtatctgg catcgccagt tcatcaacga
    11341 tatgttgtag acgaccagaa tgttcatggc cacgatgaaa taagacaatg acctttttcg
    11401 cccct
//
LOCUS       DADMHC010000126        11265 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.126, whole genome shotgun sequence.
ACCESSION   DADMHC010000126 DADMHC010000000
VERSION     DADMHC010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11265)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11265)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11265
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.126"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..77)
                     /locus_tag="JNZ57_002781"
     CDS             complement(<1..77)
                     /locus_tag="JNZ57_002781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HAY8828944.1"
                     /translation="MQDIREERLNESVKSEQSPRVVLWE"
     gene            complement(77..406)
                     /locus_tag="JNZ57_002782"
     CDS             complement(77..406)
                     /locus_tag="JNZ57_002782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8828945.1"
                     /translation="MKTFRWKVKPDMEVNSRPSVREVRFGDGYSQRMAAGLSADLKTY
                     RVTLSVTREEARHLEEFLAEHGGWKAFLWTPPYAYRQIKVTCAGWSARVGMLRVEFSA
                     EFKQVVN"
     gene            complement(403..3015)
                     /locus_tag="JNZ57_002783"
     CDS             complement(403..3015)
                     /locus_tag="JNZ57_002783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HAY8828946.1"
                     /translation="MSQPAGDLVIDLSLDAARFDEQMARVRRHFSSLEADARKTASTV
                     EQGLSRQALAAQKAGISVGQYKAAMRTLPAQFTDIVTQLAGGQNPFLIMLQQGGQISD
                     SFGEPLSLLTLLKEELLGIRDASESSEESLSDTANALAENARNAGELGRFMSVVRVAA
                     GGGVAVLAALAAAAWQAEQADRALLRSLILTGGAAATTTAELWKMAGVISDEAGGGIR
                     QAAENLARLAESGKYTAGQLRIMGETSQRWLQTVGDDAGKVEKAFEGIAADPVKALAS
                     LNQQYNFLSVSQLRHIDELERTKGKQAAVTEAMSLFADVMNARLEQLDKAATPVEKIW
                     DDVKTWTSDAWAWIGDHTLGALSLITDVVAGTVEQVKLLLVQGDLALAEFIQSAWETT
                     KNVPGVGALFGELAEENRVFIEKTKRDELALRKSIAERDARIRQGEMGYINRSRATGV
                     SKGLGQQEAVSRLAEELTGKKHTSPKTRSAGEREEEQAREALLALEAELRTLEKHSGA
                     NEKISRQRRDLWKAESQYAVLKEAATKRQLSWQEKSLLAHEKETLEYKRQLAELGDKI
                     EHQKRLNELAQQAARFEQQQSAKQAAISAKARGLTDRQAQRESEEQRLREVYGDNPAA
                     LAKATSALKNTWSAEEQLRGSWMAGMKSGWGEWAESATDSFSQVKSVATQTFDGIAQN
                     MAAMLTGSEQNWRGFTRSVLSMLTEIFLKQAMVGIVGRIGSAIGGAFGGGASASTGTA
                     IQAAAANFHFATGGFTGTGGKYEPAGIVHRGEFVFTKEATSRIGVGNLYRLMRGYAEG
                     GYVGGAGSPAQMRRAEGINFNQNNHVVIQNDGPNGQAGPQLMKAVYEMARKGAQDELR
                     LQLRDGGLLSGSGR"
     gene            complement(2996..3409)
                     /locus_tag="JNZ57_002784"
     CDS             complement(2996..3409)
                     /locus_tag="JNZ57_002784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein T"
                     /protein_id="HAY8828947.1"
                     /translation="MGRPDWRAMLAGMTSTEYADWRRFYCTHYFQDTQLDAHFSGLMY
                     AVLSLFFGDPDMHPADFSLLAPACEEEQTEMPDEEEMLMQKATGVAGGVRFGGDGGRD
                     ISPSANVVDVSEDDVALMMASAGISGGVRYVPASG"
     gene            complement(3432..3827)
                     /locus_tag="JNZ57_002785"
                     /pseudo
     CDS             complement(3432..3827)
                     /locus_tag="JNZ57_002785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310195.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein G"
     gene            complement(3841..4593)
                     /locus_tag="JNZ57_002786"
     CDS             complement(3841..4593)
                     /locus_tag="JNZ57_002786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8828948.1"
                     /translation="MATPNPLEPVKGAGTTLWVYNGKGDAYANPLSDDDWQRLAKVKD
                     LTPGEMTAESYDDNYLDDEDADWNATGQGQKSAGDTSFTLAWKPGEEGQKGLIGWFES
                     GDVRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITP
                     VSAIKVTPTSGTVAKGKTTTLTVSFEPESATDKTFRAVSADPSKATISVKDMTITVNG
                     VATGKVQILVVSGNGQFAAVAEVTVTEAGAAG"
     gene            complement(4601..4996)
                     /locus_tag="JNZ57_002787"
     CDS             complement(4601..4996)
                     /locus_tag="JNZ57_002787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8828949.1"
                     /translation="MKHTDIRAAVLDALEQHEHGATLFDGRPVVFDEEDFPAIAVYLT
                     DAEYTGEELDADTWRATLHIEVFLPAQVPDSELDQWMESRIYPAMTAIPALAGLITTM
                     VTQGYEYRRDDDMALWSSADLTYSITYEM"
     gene            complement(4993..5568)
                     /locus_tag="JNZ57_002788"
     CDS             complement(4993..5568)
                     /locus_tag="JNZ57_002788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8828950.1"
                     /translation="MAIKGLDQAIDNLSRVRKNAIPAASAMTINRVATTAINQSSSQV
                     ARETRVRRKLVKERSRLKRATVRNPNARIIVNRGDLPVIKLGIRMLGRRPNSILKAGQ
                     HRYQRAFIQRLNNGRWHVMQRLPQARYEEGNDDKGRKKRNRLPIQVVKIPMAAPLKQA
                     FDENVDRIRRERLPKELAYALKQQLRIAIKR"
     gene            complement(5584..5937)
                     /locus_tag="JNZ57_002789"
     CDS             complement(5584..5937)
                     /locus_tag="JNZ57_002789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001204533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8828951.1"
                     /translation="MRDFQNAFDAALAGVDSTIVEVMGLCAQFTSGAQRGSEVQGVFD
                     DPESLGFAGGGVRIEGSSPSLFVRTDTVRAVRRGDTLTINGEMFWVDRISPDDGGSCY
                     LWLNRGQPPAVNRRR"
     gene            complement(5930..6313)
                     /locus_tag="JNZ57_002790"
     CDS             complement(5930..6313)
                     /locus_tag="JNZ57_002790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001373367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-packaging protein FI"
                     /protein_id="HAY8828952.1"
                     /translation="MATKEENLNRLRQLAGLLGREADMSGSAADIAQRVSEWEEELAV
                     SPEGIMHSDESGADQNHTDDGEQLNNTDATDDVKAVRVRKCLHVMGYCPETGRPVELT
                     YRGMRVMVPSPLATAMIQHGTAEHA"
     gene            complement(6365..7393)
                     /locus_tag="JNZ57_002791"
     CDS             complement(6365..7393)
                     /locus_tag="JNZ57_002791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HAY8828953.1"
                     /translation="MGLFTTRQLLGYTEQKVKFRALFLELFFRRTVNFHTEEVMLDKI
                     TGKTPVAAYVSPIVEGKVLRHRGGETRVLRPGYVKPKHEFNYQQAVERLPGEDPAQLN
                     DPAYRRLRIITDNLKQEEHAIVQVEEMQAVNAVLYGKYTMEGDQFDTVEVDFGRSEGN
                     NIEQADGKKWSEQDRDTFDPTHDIDLYCDQASGLVNIAIMDGTVWRLLNGFKLFREKL
                     DTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVAEDGTEKRYLPEGTLVLG
                     NTAAEGIRCYGAIQDAQALSEGVVASSRYPKHWLTVGDPAREFTMTQSAPLMVLPDPD
                     EFVVVQVK"
     gene            complement(7451..7798)
                     /locus_tag="JNZ57_002792"
     CDS             complement(7451..7798)
                     /locus_tag="JNZ57_002792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head decoration protein"
                     /protein_id="HAY8828954.1"
                     /translation="MVTKTITEQRAEVRIFAGNDPAHTATGSSGISSATPALTPLMLD
                     EATGKLVVWDGQKAGSAVGILVLPLEGTETVLTYYKSGTFATEAIRWPDSGDEHKKAN
                     AFAGTALSHAALP"
     gene            complement(7835..9340)
                     /locus_tag="JNZ57_002793"
     CDS             complement(7835..9340)
                     /locus_tag="JNZ57_002793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HAY8828955.1"
                     /translation="MRRNLSHIIAAAFNEPLLLEPAYARVFFCALGREMGTASLSVPQ
                     QQVQLDAPGMLAETDEYMAGGKRPARVYRVVNGIAVLPVTGTLVHRLGGMRPFSGMTG
                     YDGIVTCLQQAMADSQVRGILLDIDSPGGQAAGVFDCADMIYRLRQQKPVWALCNDTA
                     CSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGN
                     QFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAVTGTEAAVFEGQSGIEAGLA
                     DELINASDAISVMATALNSNVRGGTMPQLTATEAAVQENQRVMGILTCQEAKGREQLA
                     TMLAGQQGMSVEQARAILAAAAPQQPVASAQSEADRIMACEEANGREQLAATLAAMPE
                     MTVEKARPILAAAPLADAGPSLRDQIMALDEAKGAEAQAEKLAACPGMTVENARAVLA
                     AGSGKAEPVSASTTALFEHFMANHSPAAVRGGVSQTSADGDADVKMLMAMP"
     gene            complement(9330..10112)
                     /locus_tag="JNZ57_002794"
                     /pseudo
     CDS             complement(9330..10112)
                     /locus_tag="JNZ57_002794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000831749.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
     gene            complement(10906..11187)
                     /locus_tag="JNZ57_002795"
     CDS             complement(10906..11187)
                     /locus_tag="JNZ57_002795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828956.1"
                     /translation="MTESEILRLIRRACGISKQHDEQATQPDSVTADNYVRVVAEVMR
                     RDGIELNGVDMRNIRTRVLELLAYRRRSQQRRESAKNTYQWKKPERLRR"
BASE COUNT         2364 a         3566 c         2652 g         2683 t
ORIGIN      
        1 atttcccaga gtaccacccg cggtgactgc tctgacttaa ccgactcgtt cagcctttct
       61 tcgcgaatat cctgcatcag ttcaccacct gcttaaactc cgcgctgaac tcaacgcgca
      121 acatcccgac ccgcgcagac cacccggcac aggtcacctt tatctgccgg tatgcataag
      181 gcggtgtcca cagaaacgcc ttccagccac cgtgctctgc caggaattcc tccagatgcc
      241 gggcttcctc ccgggtcacg gaaagcgtca cccggtatgt tttcaggtca gcactcagcc
      301 ctgccgccat acgctgcgaa tagccgtcac caaaacgcac ttcacgcacc gatggccgcg
      361 agttcacctc catatccggt ttcactttcc agcgaaaggt tttcatcgcc cgctccccga
      421 taacagaccg ccatcacgca actgcagccg gagctcatcc tgcgcacctt tacgggccat
      481 ctcatacacc gctttcatca gctgcggccc tgcctgcccg ttggggccgt cgttctgaat
      541 caccacgtga ttgttctgat taaaattaat gccttcggcc cgccgcatct gcgccggact
      601 tccggcaccg ccgacataac caccttccgc atacccgcgc atcagacgat acaggttgcc
      661 gacaccaatc cggctggtcg cctccttcgt gaagacaaac tccccgcgat ggacaatccc
      721 cgcaggctca tatttgccgc ccgtccccgt aaatcctccg gtcgcgaaat ggaagttcgc
      781 cgccgcagcc tgaatggccg tccccgtgga agcggatgcg ccaccaccga aagcaccacc
      841 aatggcgctg ccgatacgcc cgacaatccc caccatcgcc tgcttcagaa aaatctctgt
      901 cagcatggag agcacggaac gggtgaaacc acgccagttc tgttcgctgc cggtcagcat
      961 cgccgccata ttctgtgcaa taccgtcaaa ggtctgcgtg gccacacttt ttacctgcga
     1021 aaaactgtcc gtcgcacttt ccgcccactc gccccagccg gacttcatcc cggccatcca
     1081 gcttccacga agctgctcct ccgcagacca ggtgttcttc agtgcagatg tggccttcgc
     1141 cagcgcagcc ggattatcac cgtacacctc acgaaggcgc tgctcttccg actcccgctg
     1201 cgcctgacgg tcggtgagtc cgcgggcttt tgcgctgatt gccgcctgct tcgcgctctg
     1261 ctgctgttca aaccgcgccg cctgctgtgc cagctcattc agccgcttct ggtgttcaat
     1321 cttgtctccc agctcagcca gctggcgttt gtactccagc gtctctttct catgagccag
     1381 cagggatttt tcctgccagg ataactgccg tttcgtggca gcctctttca ggaccgcata
     1441 ctgactttcc gccttccata aatcacggcg ctgccggctg attttctcat tcgcaccgct
     1501 gtgtttttcc agcgtcctga gctcagcttc aagggcaagc agagcctctc ttgcctgctc
     1561 ctcttccctc tccccggcag agcgcgtttt cggtgatgta tgctttttac ctgtcagctc
     1621 ttcagccaga cggctgacgg cttcctgctg cccaagacct ttgctgacgc ctgttgcacg
     1681 cgagcggttg atgtacccca tttccccctg gcgtatacgc gcatcccgtt ccgcaatgga
     1741 ttttctcagc gccagttcat cgcgttttgt tttctcaata aatacgcggt tctcttctgc
     1801 cagttcacca aacaacgcac caacgccggg cacattcttt gtcgtttccc aggctgactg
     1861 aataaattca gccagcgcca gatccccctg cacaagcagc agcttcacct gttcaacggt
     1921 tccggccacc acgtcagtga tcagactgag tgcccccagt gtatgatcac ctatccatgc
     1981 ccatgcgtca gaagtccagg ttttaacatc gtcccagatt ttttccaccg gcgtggccgc
     2041 tttatcaagt tgctccagac gtgcattcat gacatccgca aacagggaca tcgcctccgt
     2101 caccgcagcc tgtttacctt tcgtgcgctc aagctcatca atatggcgta actgggaaac
     2161 gctcaggaag ttatactgct gattcaggga ggccagcgcc ttcaccggat ctgctgcaat
     2221 cccttcaaag gctttttcca ccttcccggc atcgtccccc accgtctgca gccatctctg
     2281 agaggtttcc cccatgatcc gtagctgccc ggcggtatat ttcccgcttt ctgccagacg
     2341 ggccagattt tctgccgcct gtctgatacc accaccggct tcatcgctga tcaccccggc
     2401 cattttccac aattctgccg ttgtggtggc agccgcccct ccggtcagga tcagtgaacg
     2461 caataaggcc cggtcagcct gctctgcctg ccaggcggcg gcagcaagcg cggccagtac
     2521 ggcaaccccg ccacctgccg ccacacggac caccgacata aatcgtccca gctcaccggc
     2581 attccgggca ttttcagcca gtgcatttgc cgtatctgac agcgactcct ctgatgattc
     2641 agaggcatcc ctgatcccga gaagttcctc cttcagcagg gtaagcaggc tgagcggttc
     2701 accgaatgaa tcgctgatct gccccccctg ctgcagcatg ataaggaagg gattctgacc
     2761 accggcaagc tgagtgacaa tatccgtgaa ctgtgcgggc agtgtgcgca tggcagcctt
     2821 atactgtccg actgatatcc cggctttttg tgcagccagc gcctgtcggc tcagcccctg
     2881 ttcaacagta ctggcggttt ttctggcatc cgcctccaga ctggaaaaat gacggcgtac
     2941 ccgggccatc tgttcatcaa accgggccgc atccagactc aaatcaataa ccagatcacc
     3001 cgctggctgg gacatatctc acacctccgg aaatccccgc tgaagccatc attaatgcaa
     3061 catcatcctc gctgacatcc accacattcg cagaaggtga aatatcgcgc cctccgtccc
     3121 ctccgaaccg gacgcctccg gcaactcctg tcgctttctg catcagcatt tcttcctcgt
     3181 ccggcatctc cgtctgctct tcctcacacg ctggagcaag cagactgaaa tccgccggat
     3241 gcatatccgg atcgccaaaa aacaggctga gtacggcgta catcagcccg gaaaaatgag
     3301 cgtccagttg ggtatcctga aaataatgcg tgcagtaaaa acgtcgccag tcggcatatt
     3361 cggtggatgt catcccggca agcatggcgc gccagtcggg tctccccatc tctcgcgcca
     3421 gtttcaggac aagttaccgg ctcagtcgct tctgctttcc cggtttgttc aggatcggca
     3481 tcgtgccggt tatccagcat acctgaaaga taaagcaccc ggttcgttgc ctgattcagt
     3541 gcatcagcag gccatcccag catcacttca cggcggatct gctgcatctc tgtctccgga
     3601 gaggccagag tgcctttgag ggaatgggta tgccatagcg acatcgccac aagcagggat
     3661 gccgtttcca gatatcgctg gttaatgtgc acgacatcat gcttcgttgt ctcctgttgt
     3721 tctgcgtctg aaacaaactt tatataatca aaccgctgca gcgcagacaa ttcggaaagc
     3781 gtgacagaca caccgttata ttcaaattgt tctgttttca gaaacatgta ttacctccgt
     3841 ttaccctgca gcgcccgctt cagtaacggt gacttcagcc actgcggcga actgaccatt
     3901 tccgctcacc acaaggatct gcaccttacc tgtcgccacg ccgtttaccg taattgtcat
     3961 atctttcaca ctaatggtgg ctttcgacgg atcggcggaa accgctctga acgtcttgtc
     4021 ggttgcactt tccggctcaa aagaaaccgt cagggtggtt gttttccctt ttgccaccgt
     4081 accggatgtc ggcgtcacct taatcgcact gaccggcgta attttgctgc gttcttccgc
     4141 tacagaaggt ttacccacgt tagtgacttt caccgtgcgg gtgatcactt ctttcgccgt
     4201 cacggcctta ccgatactgc tgacccagcc acgaaacaca tccaccgtgc cattcggaaa
     4261 acggatttta taggcccgga catcgccgct ttcaaaccag cctataagcc ctttctggcc
     4321 ttcctctccc ggtttccagg ccagcgtaaa gctggtatca cctgcagatt tctgcccctg
     4381 cccggtcgcg ttccagtccg cgtcttcatc atccaggtag ttatcatcgt aggattctgc
     4441 cgtcatctcg cccggcgtca gatccttcac cttagccagt cgctgccagt catcgtctga
     4501 caacgggttt gcataagcat cacccttgcc gttgtaaacc cacagagtgg taccggcacc
     4561 ttttaccggc tcaaggggat ttggtgttgc catatcgtcc tcacatctcg tatgtaatgg
     4621 aataagtcag atctgcagaa ctccataacg ccatatcgtc atcacgacga tactcatagc
     4681 cctgcgtaac catcgtggta atcagtcctg ccagtgccgg gatcgcagtc atcgccgggt
     4741 aaatccggct ttccatccac tgatcaagct ctgaatccgg tacctgtgcc ggtaaaaaca
     4801 cctcaatatg cagcgtggcc cgccaggtat ctgcatccag ctcttcaccg gtatactctg
     4861 catccgtcag ataaaccgcg atcgcaggaa aatcctcttc gtcaaaaaca acggggcgac
     4921 catcaaacag cgtcgccccg tgttcatgct gctcgagtgc atccagcact gcggcacgaa
     4981 tgtcagtgtg tttcatcgtt ttatcgcaat cctcagttgt tgtttcagcg cgtatgccag
     5041 ttctttaggc aggcgttcac gccggatacg gtcaacattc tcatcaaatg cctgtttcag
     5101 tggggccgcc atcgggattt tcaccacctg aatgggaagg cgattacgct ttttccttcc
     5161 cttgtcgtca ttgccctcct catatctggc ctggggaaga cgttgcataa catgccagcg
     5221 cccattattt aatcgctgga taaatgcccg ctgataacga tgctgaccgg ctttgagtat
     5281 gctgttcgga cgacgtccca gcattctgat ccccaactta atcacaggga gatcaccgcg
     5341 gttaacgata attctggcat tcggatttct gaccgtcgcc cgtttcagtc tggaccgttc
     5401 ctttaccagt ttccgtctca ccctggtttc ccgggcaacc tgtgacgaag actgattaat
     5461 cgccgttgtg gccacgcggt taatcgtcat tgctgaagcc gccggaatgg cgtttttacg
     5521 aacccggctc agattatcaa tcgcctgatc aagccctttt atcgccataa tttcaccctg
     5581 cgtttatcgt cgccggttaa cagcgggtgg ttgcccacgg ttgagccaga gataacagct
     5641 tcccccgtca tccggagaaa tacgatccac ccagaacatc tcgccgttaa tggtcagcgt
     5701 gtcaccacgc cgcacggcac gcaccgtatc cgtccgcaca aataatgacg ggctgcttcc
     5761 ttcaatacgg accccgccac cggcaaaacc cagcgactcc ggatcgtcaa aaaccccctg
     5821 aacttcgctt ccacgctgtg ctcccgaggt gaactgcgca cagagcccca tcacttcaac
     5881 aatcgtgctg tccaccccgg caagggcagc atcaaaggca ttctgaaaat cacgcatgct
     5941 cagccgttcc gtgctgtatc atggctgtcg ccagtggtga tggcaccata acacgcatgc
     6001 cccggtacgt cagttcaacg ggacggcctg tctccgggca ataccccatc acatgcaggc
     6061 atttccgcac acggaccgct ttaacatcat ccgtagcatc cgtgttgttc aactgctcac
     6121 catcgtctgt gtgattttga tcagccccgc tctcatcaga gtgcataatg ccctccgggg
     6181 aaacagcaag ctcctcttcc cactcagaca cacgttgagc aatatccgca gcactccccg
     6241 acatatccgc ctcgcgcccc agcaggccag ccagttgacg aagacgattc agattttctt
     6301 cttttgttgc catctcagcc tcctgtgaaa aaagacacgg gggcatttcg cccccgctca
     6361 cggattattt cacctgtacc accacaaact catccggatc cggcagcacc atcagcggtg
     6421 cggactgcgt catggtgaat tcacgggccg gatcgcccac agtcagccag tgtttcggat
     6481 aacgggaaga ggccaccaca ccttcggaca acgcctgcgc atcctgaatg gcaccatagc
     6541 aacgaatgcc ctctgctgcc gtattcccca ggaccagtgt gccctccggc agataacgtt
     6601 tttcggtacc gtcctctgcc acataagacg ttttcgccac cacaatggcc agatcgccgt
     6661 aatacccctt gaaggacacc accgccccca ggtctttcac tgccgtttcg agttgtgaat
     6721 ttgagccgcg acgggtatcc agtttttcgc ggaacagctt aaagccattc agcagacgcc
     6781 agaccgtacc gtccataatg gcgatattca caaggccgct ggcctgatcg cagtagaggt
     6841 caatatcatg cgtcggatca aacgtatcac ggtcctgctc agaccatttt ttaccgtcag
     6901 cctgctcaat gttatttcct tcagagcgcc cgaaatccac ctcgacagta tcaaactgat
     6961 ccccttccat ggtgtatttg ccatacagca cggcattcac cgcctgcatt tcttccacct
     7021 ggacaatggc gtgctcttcc tgtttgaggt tatcggtaat gatacgcaga cgacggtagg
     7081 ccgggtcgtt cagctgagcc ggatcttcac caggaaggcg ctcaaccgcc tgctggtaat
     7141 taaattcgtg tttgggcttg acgtagcccg gacgtaacac gcgggtttca ccaccgcgat
     7201 ggcgaagcac ttttccttca acgatcgggg agacataggc cgccaccggc gtttttccgg
     7261 taattttgtc cagcatcacc tcttcggtgt ggaaattcac cgtacggcgg aaaaacagct
     7321 ccagaaacag cgcacggaat ttcacttttt gttcggtata accgagtaac tggcgggtcg
     7381 taaacaatcc cataaatcag ttcctttcat taagaaatca gtcaggccaa cgcggtggcc
     7441 tgataacgtg ttacggcagc gccgcgtgac tcagggctgt gccggcaaag gcatttgcct
     7501 ttttgtgttc atccccactg tcaggccagc ggattgcctc cgtcgcaaag gtccccgact
     7561 tgtaataggt cagcaccgtc tctgtgcctt caagcggcag taccagtatg ccaaccgcac
     7621 taccggcttt ctgtccatcc cagaccacca gtttcccggt ggcttcatcc agcatcaggg
     7681 gcgtcagagc cggtgttgcc gaggaaatcc cgctgctgcc tgtggcggtg tgagccggat
     7741 cattaccggc aaaaatacgt acttccgcac gctgttcagt gatggttttc gtcaccattt
     7801 tgttaaaacc tcatattgat ggtcagcact gacttcatgg catggccatg agcattttca
     7861 cgtccgcatc accgtctgct gacgtctgtg acacgccacc ccgcaccgct gccggtgaat
     7921 gattcgccat gaaatgttca aacagggcgg ttgtggatgc agagaccggt tcggccttac
     7981 ctgatcccgc agccagcaca gcccgggcgt tctccacggt cattcccggg caggccgcca
     8041 gtttttcagc ctgcgcttct gccccttttg cctcatccag ggccatgatc tgatcacgaa
     8101 gtgagggccc ggcatccgcc agtggtgcag ccgccaggat cgggcgggct ttttccaccg
     8161 tcatctccgg catcgccgcc agcgttgccg ccagttgttc acgaccgttc gcttcttcac
     8221 acgccataat gcgatcggct tcactctgcg cggatgccac cggctgctgc ggtgccgccg
     8281 cggccagaat cgcccgggcc tgttcaacgc tcatgccctg ttgccctgcc agcatcgtgg
     8341 caagctgttc acgtcctttc gcttcctggc atgtcaggat ccccatcact cgctggttct
     8401 cctgcacggc ggcttccgtt gcagttaatt gcggcatagt gcctcctctg acattactgt
     8461 tcagcgccgt ggccatcaca ctgatggcat ccgacgcatt gattaattca tccgccagcc
     8521 cggcctcaat gccggactga ccttcaaaaa cagcggcctc tgttcccgtg actgcatcaa
     8581 cagacagacc ggtaaacatc gccacttttt cggcaaacat ccggcgcgcc gcatcaatcc
     8641 gctgctgcat gtcctggcga acctctgccg gcaacgcttc aaactgattg ccatccacct
     8701 tgtgcgcccc tgagtaaatc agcgtgatat ccacaccggc ctgcgccaga tgaccggcat
     8761 agctgacatg gctcatcatc acgccaatgg aaccgatacg ggatgtctgg gtaaccagcc
     8821 gtcgggagca ggccgacgcc agcagcatgg ccgcagaaca ggccgtgtca ttacacagtg
     8881 cccagaccgg cttctgctgc cggaggcggt aaatcatgtc agcgcagtca aacacgccgg
     8941 cggcctgccc gcccggactg tcaatgtcca gcagtatgcc ccgcacctgg ctatctgcca
     9001 ttgcctgctg aagacaggtg acaatgccgt catagccagt cattccggaa aatggccgca
     9061 tcccccccag ccggtgcacc agcgtgccgg tcaccggcag taccgcaata ccgttcacca
     9121 cccggtaaac acgggccggt cgtttacctc cggccatgta ctcgtccgtt tcagccagca
     9181 tcccgggagc atcaagctgt acctgctgtt gcggtaccga aagacttgct gtccccatct
     9241 cgcgccccag cgcgcaaaag aaaacccgcg cataggcggg ctccagaagc agcggttcat
     9301 tgaatgctgc tgcaataatg tgtgaaagat tacgtctcac gtggtgttgt ctcctcttcc
     9361 ggcctgcgac tctccgctat ctgctgctga tacgcctgcg ctatccacac cggacgtgag
     9421 agtccggctt tttcccgctc tgcagattcc ctgacctgtt ggcagaaaat gtcctgataa
     9481 tcctcgccca tcagcgccag ctctttctca tacgtgctca gtccggcctc aatgcgcatc
     9541 actgattcct gaacctcctt gagcccgtca atggccattc ttccggctcc aatccactca
     9601 gcccgtgacc aggctgatcg cgcctgataa aaatcaaacc gtgcccgtgg cggacgaata
     9661 atcccccgaa gaagtgcctc ttccagccag caggaaaaca tctgcgtggc cagccgggac
     9721 gcaataaatt ttcgccgccc cataaaatag cgccacgact cattggcgga tgcgcgggca
     9781 cttgagtaac tgaccttcga gtaatcacgg gacaactgtt cgtaggaaac gccaagaccg
     9841 gcggcgatat accgcagcag cgcctgttca agcgccgaaa atccattgtc tgaatcctgc
     9901 gcggtctgaa gtttcagatc atcaccgggg aaaaggtgcg gaattttgac accgcccagc
     9961 atcacgctat tcgtgtcata ccaggtggag aacttatcca gaatattaat aagcggatta
    10021 tccttctgcc cctgcggcgc accggcgata tattcaaagg ccttttcggt atcaaggtca
    10081 ctttcaatcg tcgctgcata catcgccttt atgaaaagac aggaaaaaat aaaatttaaa
    10141 aacagtacat tacgaatgct cagacctatc gtttaaagga gtcgcaatac acactgcaat
    10201 acacgattat ttataagatg agcggcatcc gtcataaagc tggtggatgc tttttctatg
    10261 catatatgca cagttttagt gggcgttaat gtcgatatag ggatccccat atcgagattg
    10321 gataccaggc ttttttaatc aggctggtgg gctttacctg ttttgtatga gtggtcatca
    10381 tgaccatgtc ataacaaaaa ccccatattc gtggtttttc tgtgtcgggc tattctgtcg
    10441 ttgctgtgct gatttggctg gtgggctgaa tcatcattac ggcgatgcag ctatgtagac
    10501 gttccggcct cctcaaattg aggattgtgg aagaatcaat gggttagtct tactttcccg
    10561 acatccccca atggggggtt tcgaaacaat caatagctta ggcttacttc cccgatttcc
    10621 tgcattgcag gttttcgaaa taatcaatgg gttaggccat cgtgcaattt tgcactttgc
    10681 cagccagcgc aatgtcgcgt tatcagtcct cagatgtgag ggatgtagcc agcttttccc
    10741 ccagtggggg atatccagca ccgacggctt aactgtgcgt gccagcacaa ggtagccttg
    10801 aactacttac tgcatcccat cttacaggcc gtgccttcct gcttaacttt ttgcaatgca
    10861 acaagtcagc cagcgcaatt ttgcgttatc gggaatatca gcaagttacc gccgcaatcg
    10921 ttccggcttc ttccactggt aagtattttt cgcgctctcc ctccgttgtt gagaacggcg
    10981 acgatatgcc agcaactcaa ggactcttgt tcgtatgttg cgcatatcca cgccgttaag
    11041 ctcaataccg tcacggcgca tcacctcagc cactacacgc acataattat ctgcggtcac
    11101 gctgtccggc tgcgtggcct gttcgtcatg ctgcttgctg attccacaag cacggcggat
    11161 taatcgcagt atttcggatt cagtcatagc gtactacgtt acttatcttt attcggctgc
    11221 aacttatccg gtacgtttcc ggcagtttcc atcagataat cggac
//
LOCUS       DADMHC010000127        11156 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.127, whole genome shotgun sequence.
ACCESSION   DADMHC010000127 DADMHC010000000
VERSION     DADMHC010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11156)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11156)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11156
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.127"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            17..601
                     /locus_tag="JNZ57_002796"
     CDS             17..601
                     /locus_tag="JNZ57_002796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005113360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stability/partitioning protein"
                     /protein_id="HAY8828957.1"
                     /translation="MRPVEYQNGEAFTIRNVRVMPESIPAGFKALADMSPFESLLIVD
                     LGGTTLDVAKVQGQLAGISQVFCDPHVGVSLMADAVLSVMATNGMRTSHHIANTIIEH
                     RHDEAWLRQHIHNDAHYASLMAVIREKEETLKQRVIRALAGFSGYGRVMVVGGGAEIV
                     APAIREACGVNATFIADGVPQFALVNGLYAMDKE"
     gene            606..917
                     /locus_tag="JNZ57_002797"
     CDS             606..917
                     /locus_tag="JNZ57_002797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012907691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein"
                     /protein_id="HAY8828958.1"
                     /translation="MTTPTRRISFYLKPTAVKNEGEACAWLDSLTPEARKSGQRVAFL
                     AGLALLKMNPAEAYRLAAWAGDEALSVTQTRTERPTSQPVSTAQITSQMAGNIRALFP
                     E"
     gene            981..1571
                     /locus_tag="JNZ57_002798"
     CDS             981..1571
                     /locus_tag="JNZ57_002798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001289969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ead/Ea22-like family protein"
                     /protein_id="HAY8828959.1"
                     /translation="MSEINYQALRERYSPVPVPKCPICGEEMSIQRISGAQVVYACSG
                     YGDDGDFKIGRTLADEHYEKSRVTVLDVGDPEVLALLDWLETKDNRIAELEKIATDYA
                     LKFQKAQDALKHAALLHSRTAQQTNNFAVSLPDISEYFINDVFQPLRYERDVERAIIK
                     AGGKALWQEKHEDRTHQSCDVNCGWFSPLTTDKNNT"
     gene            complement(2062..3108)
                     /locus_tag="JNZ57_002799"
                     /pseudo
     CDS             complement(2062..3108)
                     /locus_tag="JNZ57_002799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000087802.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
     gene            complement(3108..4232)
                     /locus_tag="JNZ57_002800"
     CDS             complement(3108..4232)
                     /locus_tag="JNZ57_002800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001426695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase"
                     /protein_id="HAY8828960.1"
                     /translation="MELKGGDKIILSNGAELHFLGISAASAQSYTGNFYFDEFFWVSR
                     FAELRKVAGAMATLSGLRRTYFSTPSTETHEAYAYWNGDRWNEKKASHKRQRFSVDWK
                     TLHNGLICPDRTWRQIVTLEDVVNHGWKHTDIDEIRDENTEDEFLNLYMCEFVREGES
                     AFNLNILIGCGVDGYDDWKDWKPFAPRPMGNRPVWIGYDANGSSGNGDSGAVSVVVPP
                     SVPGGRFRTVETRRVQGLEFEEQARVIEEFTCRYNVEHIGIDVTGGNGEAVYQIVKRF
                     FPAAIPYTFTLSSKRSLVLKMLQIMRAGRWEYDRAERELVAAFNAVRKVKTPGGFITY
                     ETDRARGISHGDLAWVTMLAVINEPIGGEGENERFTVMEF"
     gene            complement(4223..4858)
                     /locus_tag="JNZ57_002801"
                     /pseudo
     CDS             complement(4223..4858)
                     /locus_tag="JNZ57_002801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001746747.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            5013..5492
                     /locus_tag="JNZ57_002802"
                     /pseudo
     CDS             5013..5492
                     /locus_tag="JNZ57_002802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001262634.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
     gene            5505..5897
                     /locus_tag="JNZ57_002803"
     CDS             5505..5897
                     /locus_tag="JNZ57_002803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000072320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HAY8828961.1"
                     /translation="MSNTFKFSSRSEKNLQGVNPDLVKVTRRALEISEVDFGITEGLR
                     SRYRQKQLVATGKSQTMNSRHLTGHAVDVVAYIGSQVSWEWPLYEKIAAAFRQASREL
                     NIPVEWGGDWKTLKDGPHFQLPHGAYPA"
     gene            5894..6301
                     /locus_tag="JNZ57_002804"
     CDS             5894..6301
                     /locus_tag="JNZ57_002804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000780564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2570 domain-containing protein"
                     /protein_id="HAY8828962.1"
                     /translation="MKLWPTLGVAFLLTAGWGTSMRLSWSLGRENARNEAQASTLKST
                     ADTLNIISAGVQDMQQVLAQLRVENQQRNQDGEVRREQLRNDIAKDECAHALPDARFT
                     DRLRRHAERATASAVSPAYTADADHTGNASPLP"
     gene            6439..6906
                     /locus_tag="JNZ57_002805"
     CDS             6439..6906
                     /locus_tag="JNZ57_002805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000920596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8828963.1"
                     /translation="MLKTDSLREAMTRSCRWCQANPEKFTIFVESGNIETTGETPSFV
                     YRYQMVMFVMDYAGELDDLTLPLLAWLSENQPQLLLNPERNQDIKFSAVINDDDSADL
                     LFTLPLRERVRITRSSQGTPQAEHLLEPKPRLPSSEGDWSHVFQDVTWGESDG"
     gene            6899..7534
                     /locus_tag="JNZ57_002806"
     CDS             6899..7534
                     /locus_tag="JNZ57_002806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000356302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HAY8828964.1"
                     /translation="MDKAFTRVDETFEAIRDSLNQQAINNIARKLAQDLRRAQQARIR
                     SQKAPDGTAWTPRRRHVTRIQERIRFIWNNEARTLKNWHHDTGKYGRTITGWDEDKNS
                     IRTFYRDDIDRFLEIRTRRINQDSTKRVPMFVKLRTARYLKARADASGVTVGYSGVAA
                     RIARVHQFGERDQVAPGIFTDYPVRELLGISQADERPIYNTVLGRIAEAVR"
     gene            7531..8112
                     /locus_tag="JNZ57_002807"
     CDS             7531..8112
                     /locus_tag="JNZ57_002807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001271907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HAY8828965.1"
                     /translation="MSAELMRLLSNIIRTGIISEVDEKSWRVRVRSGELETGWLRWNT
                     TRAGAFNVWLPPSPGEQVVIACIGGNPETAMIIGSLWSDAIPAPGKSLKEIVVSAPDG
                     AVFRYDADAGALSASGMKTATLQASVSVTLDTPVVECTDLLRTATLDVTKGGKMSGNI
                     THSGGNFTSNGITVHTHKHGGVKGGSDSTGGPQ"
     gene            8109..8459
                     /locus_tag="JNZ57_002808"
     CDS             8109..8459
                     /locus_tag="JNZ57_002808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate assembly protein"
                     /protein_id="HAY8828966.1"
                     /translation="MTTRYTGMNPDGTGNLNDMEHLKQSVRDILTTPLASRVMRREYG
                     SLVPDLIDEPMNNTTRLQCMSAAVIALTRWEPRIALDAIDVVWKAGGRAGVTLSGTVM
                     QTMQNVELTITLRE"
     gene            8463..9359
                     /locus_tag="JNZ57_002809"
     CDS             8463..9359
                     /locus_tag="JNZ57_002809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001297572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate assembly protein"
                     /protein_id="HAY8828967.1"
                     /translation="MPAVDLSQLPEPAIIAEPDFEAILADTKAMMIASYPAEQREAVS
                     AALELESEPLNVIAQTMSFREMLLRQRVNEGARACMLSHSAGTDLDNLAGNMNTKRLV
                     ITPATDTTDAVMESDTSLRLRAQRAYDGLSVAGPSGAYEYFARSASGLVRDARAISPS
                     PANVTVSILSTEGDGTATEALLNTVRAVLNAEDTRPVADRLTVQSARIVTWRLNAKLY
                     FYPGPESEPILAAAESSFRKWLAEQGLIGQDVALSAIAAALHVHGVQRVEIIEPTQNM
                     AISDIQAARCESFTISEGGRNE"
     gene            9352..9882
                     /locus_tag="JNZ57_002810"
     CDS             9352..9882
                     /locus_tag="JNZ57_002810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000071700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HAY8828968.1"
                     /translation="MSNSLLPPSASNFMRCAEAVGTRITDIPVDLNTLWSPDTCPVHL
                     LPYLAWAFSVDRWDRNWPEETKRQVIRDAWLIHRHKGTISALRRAIEPLGYLIRVSEW
                     WEFGGEPGTFTVEVGTLDSGVTEEMYLEMERLIADARPVSRHMTGLNIIQEIPGDIFA
                     AAATYDGEVITIYPGD"
     gene            9885..>11156
                     /locus_tag="JNZ57_002811"
     CDS             9885..>11156
                     /locus_tag="JNZ57_002811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000108506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8828969.1"
                     /translation="MSTTTRKFKTIITDTGAKKLAQVAAPDGKPVRLTHMAVGDGGGT
                     LPTPDSKQTRLVHEVWRHTVNRVILDATHQNRIIAELVIPPETGGFWIREIGVFDEHG
                     DLIAVGNTAESYKPAVAEGSGRAQTFRTILTVSSTATVALTVDNTMVMATVDYVDDKL
                     KEHEQSRRHPDASLTAKGFVQLSSATNSVSETQAATPKAVKAAYDLANGKYTAQDAST
                     TRKGLVQLSSATNSTSETQAATPKAVKAAYDLANAKYTAQDATTAQKGIVQLSSATNS
                     TSETLAATSKAVKAVMDETNKKAPLNSPALTGTPTTPTARQGTNNTQIASTAFVMAAI
                     AALVDSSPDALNTLNELAAALGNDPNFATTMTNALAGKQPKDAILTALAGLATAADRF
                     PYFTGNDVASLATLTKVGRDILAKSTVAAVIE"
BASE COUNT         2728 a         3073 c         3056 g         2299 t
ORIGIN      
        1 caaaaaagcg aacgtcatgc gcccggtgga gtaccagaac ggcgaagcat tcactatccg
       61 taacgtacgg gttatgcctg aatccattcc ggctggcttt aaggcactgg ctgacatgag
      121 tccgtttgaa tccctgctga ttgtggattt gggcggaacc acgctggatg tggcaaaggt
      181 tcaggggcaa ctggcaggta tcagccaggt gttttgcgat ccacacgtgg gcgtttctct
      241 gatggccgat gccgtactgt cggtgatggc cactaacggt atgcgcacca gtcaccacat
      301 cgccaatacc attatcgaac atcgccatga tgaagcctgg ctgcgccagc acatccacaa
      361 tgacgcgcat tacgccagcc tgatggcggt aattcgtgaa aaggaagaaa cactgaaaca
      421 acgcgtgatc cgcgcgctgg cgggtttttc gggttacggg cgggtgatgg ttgtcggtgg
      481 aggggcggag attgtggcac ccgctatccg cgaagcctgc ggagttaatg cgactttcat
      541 cgcggacggg gtgccacagt ttgctctggt taatgggctg tacgcaatgg acaaggagta
      601 aaccaatgac gactccaacc agacggataa gtttctatct gaagcccacc gccgtcaaga
      661 acgaaggaga agcatgcgcc tggctggaca gccttacacc agaagcccgc aaaagcggcc
      721 aacgcgtggc ttttctggcc gggctggcac ttctgaaaat gaatccggca gaggcttatc
      781 gactggctgc atgggctggt gatgaagcgt tatcagtgac acaaaccagg acagaacgcc
      841 ccacatcaca gccagtatca accgcacaga taaccagtca gatggccgga aatatccggg
      901 cgttatttcc tgaataacac aacatcaggg cgagttcgcc ctgctctcca cctcagaaca
      961 taaacaagga gaacgactta atgagcgaaa tcaactatca ggcattacgt gaacgttatt
     1021 cacctgtgcc agtaccgaaa tgccctattt gcggcgagga aatgtcaatt cagcgaatat
     1081 ctggagcaca ggttgtttat gcctgctccg gttatggtga tgatggagat ttcaaaattg
     1141 gccgaactct tgctgacgaa cattatgaaa aatcacgcgt aacagtgttg gatgtcgggg
     1201 atcctgaagt attggcgcta cttgattggc tggaaaccaa agacaaccga atcgctgaac
     1261 tggaaaaaat cgccactgac tatgcactta aattccagaa agcacaggac gcattaaagc
     1321 atgccgcttt gctgcatagc aggacggcgc aacaaacaaa taattttgca gtatcgcttc
     1381 cggacataag cgaatatttc attaatgacg tatttcagcc cttgcgatac gagcgggatg
     1441 ttgaaagagc catcataaag gctggcggaa aagcattgtg gcaggagaaa cacgaggaca
     1501 gaacgcatca gtcatgcgat gtaaattgtg gatggtttag cccactgacg acagataaaa
     1561 ataacacctg atccccctca aactagggcg ataatcgcac atcgccctgc tgcacaatag
     1621 tgcacaaatt tgcacaattt ttttgaacga atttttgccc ttccagcccg cgtggcggct
     1681 ggatccgtca aggatccgtg cgtgcacaaa aaaacgcgct ttttctgcgc gcaggtgacg
     1741 ggggaacagc ccgcgtttca gggggtaaat agcgttccct taacgatgtc gcagcgacac
     1801 gacagaatgg ccgtatttct cacgctgagc gtgaaaaata cgtgagggat tctgatttga
     1861 tggggtgaaa ggtaaggccg tcaaaatcgc actgaggcgg cgagaacatg cagtcaacgc
     1921 ggtgggattg cgtaagagtc tgaccgtcga tggtggcgat aaactggaag gcgtcgtgaa
     1981 attatctgac tgatacagga gctggagagt cggggcataa attttttatg ccccggcgaa
     2041 gcagcagaca agcgaagcgc atcaggatgt gggctggatg tctaacagtg cgtaagggtt
     2101 aaagcggatc acctcttcgc caagccagtc attgatgtgc ttcatggcct ccatgacggg
     2161 catcagctcg ttaattgcgt aaacccgcgc ggccttctcc acatcaccaa acgcactttt
     2221 ttcacccggc atcgccccca tcagttgcgg cggaacgcgg tgcgcagcca gcacatcatc
     2281 acgggatgcc gccttaacat tcatgaactc atcctttgcg gtgatctgct ggaacggcaa
     2341 aatttgcacc ccctctttgc ccccgttggg cgcatgaatg agcacgtttt taaacgcacc
     2401 accaccacgc gcaccctgta gcgtttcttt cagggagtcc atgctttcgc ggtttacctg
     2461 cgcggcaccg atgtagatga tgcacccggc gtgggatccg ttgtcgtaat acagttttct
     2521 gaacatgtcc gccgaatgag acaggctggc cgagagtaat gcgccgagat attccggcat
     2581 gccgtagatt tcctggttaa tgtcaggatt catcaggtga cacactttgc ctgggcgaaa
     2641 ctgaaacgca tccttgccat cctgcacata ccaccatgat tcaagatcgc ttccgcgtcg
     2701 catgtatttc gccagggcgt gccgtaattt aagcggttcg ccgagcatat tgcttcgaag
     2761 ctcaaggaat gcgttaccga acacaaacca gtccagcgcc agcgccgaga aatcctaccg
     2821 ggaaagcagc gggtgcggga tgtagcaacc gagcaataca ttgcgcttaa agtaaagcgc
     2881 agactgatgc caagacgttt gccgggcagc tcttgccaga ccgtaccagt ccaccggggg
     2941 ttcataccac cgcccgttat cagcacagta catattgtcc agcaggtcat gcccggtcag
     3001 gcgataagga ccatcaaatg tgaatgcact gagcgatgat tctttcctga gcgcatcagc
     3061 gagatcaatg cgtgaactca tgcgcacttt tttatttttt ctgctcatca gaactccata
     3121 accgtgaaac gctcgttttc tccttcgccg ccaatcggtt cgttaatgac agcaagcatg
     3181 gttacccacg caaggtcgcc gtggctgatc cccctcgctc ggtccgtttc gtaagtgata
     3241 aagccgcccg gtgttttcac cttacgcacg gcgttaaagg ccgcgaccag ctcgcgttcg
     3301 gcgcgatcgt attcccaccg cccggcacgc attatttgca gcattttcag taccagcgac
     3361 cgttttgatg acagcgtgaa ggtgtacgga atagcggcag ggaaaaaccg tttcactatc
     3421 tgataaacag cctccccgtt cccgcccgtc acatcaatgc cgatgtgttc cacgttgtag
     3481 cgacacgtga actcttcaat gactctggcc tgttcttcaa actccagccc ctgaacgcgt
     3541 cgcgtctcca ccgttcgaaa acggccacca ggaacagacg gaggaaccac cacggacaca
     3601 gcgccgctgt cgccgttgcc actgctgccg tttgcgtcat acccaatcca taccggacga
     3661 ttccccatcg ggcggggagc aaaaggtttc cagtctttcc agtcgtcgta tccgtcaacg
     3721 ccgcagccaa tcaggatatt caggttaaat gccgattccc cttcgcggac aaactcgcac
     3781 atatagagat tgaggaactc gtcttcggtg ttttcatcac gaatttcgtc gatatcggtg
     3841 tgtttccagc cgtgattaac cacatcttcc agcgtgacaa tttgccgcca cgtccggtca
     3901 gggcagataa gcccgttatg cagcgttttc cagtccacag aaaaacgctg ccgtttatgc
     3961 gaggcctttt tctcgttcca gcggtcgccg ttccagtagg cgtatgcctc gtgcgtttcg
     4021 gtggatggcg tggagaagta ggtgcgccgc agtccgctga gggttgccat agcgccagcc
     4081 accttgcgca gttcagcaaa gcgactgacc cagaaaaatt catcaaaata aaaattgccc
     4141 gtataggact gtgccgacgc agcagaaatg ccgagaaaat gcagctctgc gccgttggag
     4201 aggatgattt tatcgccccc tttcagctcc acatcaactt cagccgcgcc ttctgaataa
     4261 tgcttttaaa ctggaacgcc tgacgacgcg acgcagacaa aaaaatctgg ttacgctggt
     4321 aaggttgcgc cacatcgtca cgcagcgcca tcagcagtgc ttcctgtgca aaataccagg
     4381 tcgccccaat ctgtcgggat ttcaggatca tcctgttacg tatcccggct tccctgcaaa
     4441 gggtcaggga gtcaaaccag ccccgctgat gccactccag cctgctgatg attttttccc
     4501 gcagtgcggc aatctgttcc ggcgtgaaat gatttttgag ttttttcgcc cggcctttct
     4561 ttcctgcggc catcacatcc ggctggccat catgcagctt tttaagctgc cgggtcagca
     4621 ggtctatttc cttaaagtca ccgcctgttt tattctgttt ttcagtaagc tggatgaggc
     4681 gcgcatcgat ggactgcgtg acacgctgcc cgggtggcgt ttcatcccac tggtcacgtt
     4741 ttttccacgc ataaatcgtg ttcgggttta ttcccatcag acgtgatatt tctgcgggcg
     4801 gataaccctg ccagtaaagt tgccgcgcac gctggcgcac aaaagcgtcc tgaatcattg
     4861 ctccccctga gtaattacag gaagattacc cgcgcgcgaa actgttctcc ttaaccctct
     4921 gttctggccg ttttcttaca acaaaagccc tttgtatcag cctgttacgc tttgccatca
     4981 tgactgaaga accagtcaga ggggcaaaaa ctatggctaa tgaaaaaaag acatcccgca
     5041 aaaagtttcg cgtggctgtc tccggatcaa ctgttgatgg ccgtgaaatc agtccggtgc
     5101 atctgcgtga agccgccgag aacttcaacc cggatgttta cgctgcccgc gtgaacgttg
     5161 agcactatct ctcgccatgc ccgtcaagcg aattttccgc aatgggcgat gtcaccgcac
     5221 tgagtacgga agacattacg gaaggtccgc tggccggacg tactgcgctg tatgcagaaa
     5281 tcgaaccgac cgagcgcatg aagcagcttg ttgcggacgg caagaaaatc tattccagta
     5341 tcgaactgca cccgcagttc tccgttaacg ggcgcgccta tctggtcggg ctggcgatga
     5401 ccgacacccc ggcaagcctg ggcactgagc gcctgaaatt cacggcacag caacgtcagg
     5461 cggtgatgac gtttaacagt atccagggtg aaggagaagg acgaatgagc aacacattta
     5521 aattcagcag ccggagcgaa aagaatttgc agggtgtaaa tcctgatctg gtgaaagtga
     5581 cccgacgggc actggaaatc tcggaagtgg attttggtat caccgaaggg ttgcgcagcc
     5641 gttaccgcca gaagcaactg gtggccacgg gtaagagcca gaccatgaac agccgccacc
     5701 ttacggggca tgccgtggat gttgtggctt atatcggcag ccaggtgtca tgggaatggc
     5761 cgctgtacga aaaaatcgca gcagcattca gacaggccag ccgggaactg aatattccgg
     5821 tggaatgggg cggcgactgg aagaccctga aagacggacc gcattttcag ttaccacacg
     5881 gagcctatcc ggcatgaagc tctggcccac gcttggcgtc gctttccttc tgactgccgg
     5941 atggggaaca tccatgcgtc tgtcgtggtc gctgggccgg gagaacgcca gaaacgaagc
     6001 gcaggccagc accctgaaaa gtaccgccga caccctgaat atcatcagcg ccggggtaca
     6061 ggatatgcag caggtgctgg cgcaactccg cgtggaaaat cagcaacgca atcaggacgg
     6121 agaggtaaga cgtgaacagc tacgcaacga tattgcaaaa gatgaatgcg cccacgcttt
     6181 gcctgacgct cgttttactg acaggctgcg caggcacgca gaacgcgcca ctgccagcgc
     6241 cgtcagtccg gcttataccg cagacgctga ccataccggt aacgcctccc cccttccctg
     6301 acactcccac atggggaaat ctcggtatat ggggcgaccg ccttctggat gcactggaaa
     6361 cctgtaacgc ggataaacgg gccattgaat tactggaaca gcgcaggctg caacgactga
     6421 acaacgagga taacaaccat gctgaaaact gattccctgc gtgaagccat gacccgttca
     6481 tgccgatggt gtcaggctaa cccggaaaaa ttcaccattt tcgtggagag cggcaacatt
     6541 gaaacgaccg gagaaacccc atcgtttgtt taccgctatc agatggtgat gtttgtcatg
     6601 gattacgccg gggagctgga cgacctcacg ctgccgctgc tggcgtggtt atccgaaaat
     6661 cagccacagt tgttgctcaa ccctgagcgt aatcaggaca tcaaattctc cgccgttatc
     6721 aatgacgatg acagcgccga tctcctgttt acgctccccc tgcgggaacg cgttcgcatc
     6781 acgcgcagca gtcagggcac accgcaggca gaacacctgc tggagccaaa accccgcctg
     6841 ccatcttccg aaggcgactg gtcgcatgta ttccaggatg tgacgtgggg tgaaagcgat
     6901 ggataaggca ttcactcgcg tggatgaaac ctttgaagcc atccgcgaca gcctgaatca
     6961 gcaggccatc aataacatcg ccagaaagct ggcacaggat ttacgccgcg cccagcaggc
     7021 acgtatccgg tcacagaaag cgccggacgg gaccgcatgg acaccacgca gacgccacgt
     7081 aacccggata caggagcgca ttcgctttat ctggaataac gaagcacgca cgctgaaaaa
     7141 ctggcatcac gacacgggga aatacgggcg aaccatcacc gggtgggatg aggataaaaa
     7201 cagcatccgc acgttttacc gggatgacat cgaccgcttt ctggaaatac gcacccggcg
     7261 catcaaccag gacagcacaa agcgcgtccc catgttcgta aaactgcgca ccgcccgcta
     7321 cctgaaagcc cgtgcagatg cttccggtgt gacggtgggt tacagcggcg tggccgcacg
     7381 tattgcacgc gttcatcagt tcggtgagcg cgatcaggtt gcgccgggca ttttcaccga
     7441 ttacccggta cgtgagctgc tgggtatcag ccaggcagat gagcgcccga tttataacac
     7501 ggtgctgggc cggattgcag aggctgtacg gtgagcgcag aactcatgcg gctactgagc
     7561 aatatcatcc gcaccgggat catctctgaa gttgatgaga agtcctggcg cgtgcgcgtt
     7621 cgcagcggcg aactggaaac aggttggctg cgctggaaca ccactcgcgc gggagccttc
     7681 aatgtgtggc tgccgccatc accaggcgaa caggtggtaa ttgcctgcat tggcggcaac
     7741 ccggaaaccg ccatgataat tggcagcctg tggagtgatg ccattccggc ccccggcaaa
     7801 agcctgaaag aaatcgtggt cagcgcgccg gatggcgcgg tgttccgcta cgacgcggac
     7861 gcaggcgcac tgagcgccag cggcatgaaa acagccaccc tgcaggcatc cgtcagcgtg
     7921 acactggata cgcccgtcgt ggaatgcaca gaccttctga gaacggcgac gcttgacgtc
     7981 acaaaagggg gaaagatgag cggcaatatc acgcacagcg gcggcaattt cacctcaaac
     8041 ggcatcacag tgcatacgca taaacacggt ggcgttaaag gtggcagcga ttcgacagga
     8101 ggcccgcagt gacaacccgc tacacaggaa tgaacccgga cggaacggga aacctgaacg
     8161 atatggagca cctgaaacag tcagtcaggg acatcctgac caccccgctg gcaagccggg
     8221 ttatgcgacg ggaatatggc agccttgtgc ctgatttgat tgacgaaccc atgaataaca
     8281 ccacgcgtct gcaatgcatg agtgctgccg tgattgcgct gacacgatgg gaaccccgca
     8341 ttgccctgga cgctatcgac gttgtctgga aggcaggagg ccgcgccggg gtgacgctgt
     8401 cgggcactgt catgcagacc atgcagaatg ttgaattaac catcacgctg agggagtaaa
     8461 tcatgcctgc cgttgacctt tcacagttac cggaacccgc catcatcgcg gagcctgact
     8521 ttgaggcaat tctggctgac acaaaggcca tgatgattgc gtcctatccc gccgaacagc
     8581 gtgaagccgt ttccgccgcg ctggagctgg aatcggaacc ccttaacgtt atcgctcaaa
     8641 ccatgtcgtt tcgtgaaatg ctgttacgcc agcgggtcaa tgagggtgca cgcgcctgca
     8701 tgctaagcca cagcgccggg acagacctgg acaacctcgc gggcaatatg aacacaaagc
     8761 gcctggttat cactccggca acggatacca ccgatgcagt gatggaaagt gacacctcgc
     8821 tgagactacg ggcgcaacgg gcatatgacg gtctgagtgt tgctggcccg tcaggtgcat
     8881 acgagtattt tgcacgcagc gccagcggtc tggtacgcga tgcgcgggcc atcagcccgt
     8941 ctccggccaa cgtgacggtt tccatcctgt ccactgaggg cgacggcaca gcaacggagg
     9001 cgttgcttaa taccgttcgc gccgttctga atgcagagga tacccgcccg gtggccgacc
     9061 gcctgaccgt acagagtgcc agaatcgtga catggcggct gaatgcaaaa ctgtactttt
     9121 accccggccc ggaatccgaa cctattctgg ccgcggctga atcgtcgttc aggaagtggc
     9181 tggctgagca ggggcttatc ggtcaggacg tggcgttgtc cgccattgct gccgcactgc
     9241 atgtgcacgg tgtgcaacgc gtggagataa tcgaacccac acagaatatg gccatcagcg
     9301 acatacaggc ggcgcgctgt gagtcattca ccatcagcga aggtggacgc aatgagtaat
     9361 tcgttgttac caccatcagc cagcaatttc atgcgttgtg ccgaagccgt cggaacacgc
     9421 attacagaca ttccggtaga cctcaacacg ctgtggtcgc cggacacctg cccggtgcat
     9481 ctgctgcctt atctcgcctg ggcgttttcc gttgaccgct gggatcgcaa ctggccggaa
     9541 gagacaaagc gacaggttat tcgtgatgca tggctgatac accgacacaa agggaccatc
     9601 agcgcactgc gccgggccat tgagccgctg ggatacctca ttcgcgtgtc tgagtggtgg
     9661 gagttcggcg gagaaccggg aacatttacc gttgaagtcg gcacgctgga cagtggcgtg
     9721 acggaggaaa tgtatctgga aatggagcgg ttgattgctg atgcccgccc ggtcagccgc
     9781 cacatgacag ggctgaatat cattcaggaa attccggggg atattttcgc agcggcggca
     9841 acttatgacg gtgaagttat taccatttat ccaggcgatt aagcatgagt accacaacac
     9901 gaaaatttaa aaccattatc accgatacgg gtgcaaaaaa attagctcag gtagccgcgc
     9961 cagatggtaa gcctgtccgc ctgactcata tggccgtggg cgacggtggc ggcacgttgc
    10021 ccacaccaga cagtaagcag acccgtctgg tgcatgaggt gtggcgacat actgttaatc
    10081 gcgtcatcct ggacgcaaca catcagaacc gcattattgc ggagctggtt attcctcctg
    10141 aaacgggcgg attctggatc cgggaaattg gtgtatttga tgagcacggc gatttaatcg
    10201 cggtgggaaa tactgccgaa agttacaagc cagccgttgc cgaagggtcc ggtcgtgcac
    10261 aaacatttcg caccattctg accgtatcca gcactgccac cgtggcgctt accgtggaca
    10321 acaccatggt gatggccaca gtggattacg tggatgacaa actgaaagag catgaacagt
    10381 cacgacgtca cccggacgcc tcgctgaccg caaaaggctt tgttcaactc agtagcgcca
    10441 ctaacagcgt gtctgaaacg caggctgcaa cgccgaaagc agtaaaggcc gcgtatgatc
    10501 ttgctaacgg taaatatact gcgcaggatg ccagcacgac gcgaaaaggc cttgtccagc
    10561 tcagtagcgc caccaacagc acgtctgaaa cgcaggctgc aacgccgaaa gcagtaaagg
    10621 ccgcgtatga ccttgctaac gcaaaatata ccgctcagga cgccacgacg gcacaaaaag
    10681 ggatagtcca gctcagtagt gccaccaaca gcacgtctga aacactggcc gcgacatcga
    10741 aagcggttaa ggcggtaatg gatgaaacga acaagaaagc gcccttaaac agtcctgcgc
    10801 tgaccggaac gccaacaacg ccaactgcgc gacagggaac gaataatacc caaatcgcaa
    10861 gcacggcttt cgttatggct gcgattgccg cccttgtaga ttcgtcacct gacgcactga
    10921 atacgctgaa cgagttagcg gcggcgctgg gaaacgaccc gaattttgcg accaccatga
    10981 ctaacgcgct tgcgggtaag caaccgaaag atgccatcct gacggcgctg gccgggcttg
    11041 ctactgcggc agacaggttt ccgtatttta cggggaatga tgtcgccagc ctggcaaccc
    11101 tgacaaaagt cgggcgggat attcttgcga aatcgaccgt tgctgccgtt atcgaa
//
LOCUS       DADMHC010000128        11074 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.128, whole genome shotgun sequence.
ACCESSION   DADMHC010000128 DADMHC010000000
VERSION     DADMHC010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11074)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11074)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11074
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.128"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            188..2412
                     /gene="traD"
                     /locus_tag="JNZ57_002812"
                     /pseudo
     CDS             188..2412
                     /gene="traD"
                     /locus_tag="JNZ57_002812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233146.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system coupling
                     protein TraD"
     gene            complement(2421..2819)
                     /gene="vapC"
                     /locus_tag="JNZ57_002813"
     CDS             complement(2421..2819)
                     /gene="vapC"
                     /locus_tag="JNZ57_002813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(fMet)-specific endonuclease VapC"
                     /protein_id="HAY8828970.1"
                     /translation="MLKFMLDTNICIFTIKNKPASVRERFNLNQGRMCISSVTLMELI
                     YGAEKSQMPERNLAVIEGFVSRIDVLDYDAAAATHTVQIRAELARQGRPVGPFDQMIA
                     GHARSRGLIIVTNNTREFERVGGLRTEDWS"
     gene            complement(2819..3046)
                     /gene="vapB"
                     /locus_tag="JNZ57_002814"
     CDS             complement(2819..3046)
                     /gene="vapB"
                     /locus_tag="JNZ57_002814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system antitoxin VapB"
                     /protein_id="HAY8828971.1"
                     /translation="METTVFLSNRSQAVRLPKAVALPENVKRVEVIAVGRTRIITPAG
                     ETWDEWFDGHSVSADFMDNREQPGMQERESF"
     gene            3128..3544
                     /locus_tag="JNZ57_002815"
                     /pseudo
     CDS             3128..3544
                     /locus_tag="JNZ57_002815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005030230.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative relaxase"
     gene            3531..8402
                     /gene="traI"
                     /locus_tag="JNZ57_002816"
                     /pseudo
     CDS             3531..8402
                     /gene="traI"
                     /locus_tag="JNZ57_002816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005079803.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative transfer relaxase/helicase TraI"
     gene            8422..9168
                     /gene="traX"
                     /locus_tag="JNZ57_002817"
     CDS             8422..9168
                     /gene="traX"
                     /locus_tag="JNZ57_002817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858383.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system pilin
                     acetylase TraX"
                     /protein_id="HAY8828972.1"
                     /translation="MTTDNTNTTRNDSLAARTDTWLQSFLVWSPGQRDIIKTVALVLM
                     VLDHINLIFQLKQEWMFLAGRGAFPLFALVWGLNLSRHAHIRQPAINRLWGWGIIAQF
                     AYYLAGFPWYEGNILFAFAVAAQVLTWCETRSGWRTAAAILLMALWGPLSGTSYGIAG
                     LLMLAVSNRLYRAEDRAERLALVACLLAVIPALNLATSDAAAVAGLVMTVLTVGLVLC
                     AGKSLPRFWPGDFFPTFYACHLAVLGVLAL"
     gene            9223..9783
                     /locus_tag="JNZ57_002818"
     CDS             9223..9783
                     /locus_tag="JNZ57_002818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fertility inhibition protein FinO"
                     /protein_id="HAY8828973.1"
                     /translation="MTEQKRPVLTLKRKTEGTATVRSRKTIINVTTPPKWKVKKQKLA
                     EKAAREAELAAKKAQARQALSIYLNLPTLDEAVNTLKPWWPGLFDGDTPRLLACGIRD
                     VLLEDVAQRNIPLSHKKLRRALKAITRSESYLCAMKAGACRYDTEGYVTEHISQEEEA
                     YAGARLAKIRRQNRIKAELQAVLDEK"
     gene            9914..10126
                     /locus_tag="JNZ57_002819"
     CDS             9914..10126
                     /locus_tag="JNZ57_002819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_958725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANR family transcriptional regulator"
                     /protein_id="HAY8828974.1"
                     /translation="MNGFRNSSRNGQVWRYQRAGGRAVILEVSGRWMEAAEAWRRAAC
                     VAPRTDWQQFARKRAEHCHRRCRGRG"
     gene            10310..10810
                     /locus_tag="JNZ57_002820"
     CDS             10310..10810
                     /locus_tag="JNZ57_002820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001302180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HAY8828975.1"
                     /translation="MLHYSGGLKYRCHLSDMENNMRKYIPLVLFIFSWPVLSADIHGR
                     VVRVLDGDTIEVMDSLKAVRIRLVNIDAPEKKQDYGRWSTDMMKSLVAGKTVTVTYFQ
                     RDRYGRILGQVYAPDGMNINQFMVRAGAAWVYEQYNTDPVLPVLQNEARQQKRGLWSD
                     ADPVPP"
     gene            10877..>11074
                     /gene="hha"
                     /locus_tag="JNZ57_002821"
     CDS             10877..>11074
                     /gene="hha"
                     /locus_tag="JNZ57_002821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_958726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin expression modulator Hha"
                     /protein_id="HAY8828976.1"
                     /translation="MAKTKQEWLYQLRRCSSVNTLEKIIHKNRDSLSNRERESFNSAA
                     DHRLAELITGKLYDRIPKEIWK"
BASE COUNT         2627 a         2747 c         3394 g         2306 t
ORIGIN      
        1 ccggaaagaa ataaaataaa ttttatttct ccccggcgtt tccgaaataa atatgaaaac
       61 actgagcggt tgtgcaaatt ctttgtgcga ccgtgaagtg ttgccggcga agccggaatt
      121 taacggttat taatcttttc atcattaata atcagtccga ctgactttct ttcttcggaa
      181 tatcatcatg agttttaacg caaaggatat gacccagggc ggtcagattg cgtccatgcg
      241 tatccgcatg ttcagccaga tcgccaatat tatgctttac tgcctgttta ttttttctgg
      301 atactcgttg gtctggtttt atgggtaaaa ataagctggc agacgtttgt gaatggctgt
      361 atttactggt ggtgtaccac gctggaaggc atgcgggatt taatcaagtc tcagccggta
      421 tatgagattc agtattacgg caaaaccttc cggatgaacg ctgctcaggt actgcatgat
      481 aaatatatga tctggtgcgg tgagcagtta tggtctgcat tcgttctggc cacagttgtg
      541 gcactggtta tttgcctgat taccttcttt gttgtctcct ggattctggg gcgtcagggt
      601 aaacaacaga gcgaaaatga agtcacaggt ggtcgtcaac tgacagacaa tccgaaagac
      661 gttgcccgga tgctgaaaaa agacggcagg gactccgata tccggattgg cgatctgccg
      721 attatccggg attccgaaat ccagaacttc tgtctgcacg gcacggtcgg ggccggtaag
      781 tcggaggtta tccgtcgtct ggccaactac gcccgtcagc gtggtgatat ggtggtgatt
      841 tatgaccgtt caggggaatt tgttaaaagt tactatgatc cctccatcga taagatcctg
      901 aatccgctgg atgcacgctg tgccgcctgg gatttgtgga aggagtgcct gacacagccg
      961 gattttgata ataccgcaaa tactctgatc ccgatgggca caaaagagga cccgttctgg
     1021 cagggttcag gacgtaccat ttttgcggaa gcggcgtatc tgatgcgtaa tgaccccaac
     1081 cgcagctaca gcaaactggt ggacacactg ctttccatca aaattgaaaa actgcgtacc
     1141 tacctgcgta attcaccggc ggccaacctg gtggaagaga aaatcgagaa aacggccata
     1201 tccatccgtg ctgtgctgac caactatgtg aaagccatcc gttacctgca ggggattgag
     1261 cataacggtg agcccttcac catccgtgac tggatgcgtg gtgtccggga ggatcagaaa
     1321 aacggctggc tgtttatctc gtcgaatgcc gacactcatg cctccctgaa gccggtgatc
     1381 tccatgtggc tgtccattgc cattcgtggt ctgctggcaa tgggagaaaa ccgtaatcgt
     1441 cgtgtgtggt tcttctgtga tgagttaccc acattacaca aactgccgga cctggtggag
     1501 atcctgccgg aagcccgtaa gttcggtggc tgttatgtgt ttggtatcca gtcctatgcc
     1561 cagctggaag atatctacgg tgagaaagcg gctgccacgc tgtttgacgt catgaacacc
     1621 cgtgcctttt tccgttctcc cagccataag attgcggagt tcgctgccgg tgaaattggt
     1681 gagaaagagc acctgaaagc cagcgaacag tattcctacg gtgctgatcc ggtacgtgac
     1741 ggggtatcga ccggtaagga tatggagcgc cagacgctgg tcagttattc cgacattcag
     1801 tccctgccgg atctgacctg ctatgtcacc ctgcccggac cgtatccggc agtcaaactc
     1861 tcactgaaat atcaggaacg accgaaggtc gctccggagt ttattccgcg tgacatcaac
     1921 ccggaaatgg agaaccgtct gagtgccgta cttgccgcaa gggaagcaga aggtcgtcag
     1981 atggccagcc tcttcgaacc ggatgtcccg gaggttgttt ccggagaaga cgtgactcag
     2041 gctgaacagc cgcaacagcc gcaacagccg caacagccgc aacagccgca acagccgcaa
     2101 cagccgcaac agccgcaaca gccgcaacag ccggtgtctc ctgtcatcaa cgataagaag
     2161 tcagattcag gtgtgaatgt tccggcaggg gggatcgagc aggagctgaa aatgaaaccg
     2221 gaagaagaga tggaacagca actgccaccc gggatcagtg aatccggtga agtggtggat
     2281 atggccgctt atgaggcatg gcagcaggaa aatcatccgg acacctggca gcagatgcag
     2341 cgtcgtgaag aggtgaacat caatgtgcac cgggaacgcg gggaggatgt tgagccggga
     2401 gatgatttct gatgaacagg tcagctccag tcttcagttc tcaggccgcc cacacgttca
     2461 aattcccggg tgttattagt cacaataatc agcccccgac tgcgggcatg acctgcgatc
     2521 atttgatcaa atggcccgac agggcgtccc tgacgggcaa gttctgctct tatctggacg
     2581 gtgtgtgtgg ctgcagcagc gtcgtaatcc agaacatcaa tgcgggaaac aaatccctcg
     2641 atcacagcga gattacgttc aggcatctgg cttttttctg caccatatat cagctccatc
     2701 agggtgaccg aactgataca cattctcccc tggttcaggt taaaacgctc cctgacgctg
     2761 gcgggtttgt tctttatcgt aaaaatgcag atgttggtat cgagcataaa cttcagcatc
     2821 agaatgactc cctttcctgc atgccgggct gttccctgtt atccataaaa tcggcgctga
     2881 cgctgtgtcc gtcgaaccat tcgtcccatg tctctccggc tggcgtaatg attctggttc
     2941 gtccgacagc aatcacttca acgcgtttta cgttttccgg caatgcaacc gcttttggca
     3001 gtctgaccgc ctggctgcgg ttgctgagaa atacggtggt ttccattatt tgcctcctta
     3061 tgtggatatg tcttgtgtat atccattgtg ggattgatac cgggatatgt caaagggata
     3121 tacgtttatg atgagtatcg cgcaggtcag atcggccgga agtgccggga attattatac
     3181 cgacaaggat aattactatg tgctgggcag catgggagaa cgctgggccg gccagggggc
     3241 tgaacaaggc tgcagggcag tgtcgataag gatgtcttta cccgccttct ggagggcagg
     3301 ctgccggacg gggcggattt aagccgcatg caggatggca gtaacaggca tcgtcccggc
     3361 tacgacctga ccttctccgc tcccaaaagt gtctccatga tggccatgct cgggggggga
     3421 caaacgtctt attgaagcac ataaccaggc cgtggatttt gctgtccgtc atcacccgtg
     3481 tggaggcact ggcctccaca cgggtgatga cggacggaca gtcagaaacg gtgctgaccg
     3541 gtaatctggt gatggcactg tttaaccacg acaccagtcg cgatcaggaa ccacagttac
     3601 acacgcatgc ggtggtgact aatgttacgc agcataacgg cgaatggaag acactgagca
     3661 gtgacaaagt ggggaaaacg gggttcattg agaatgtgta cgctaatcag attgcctttg
     3721 gcaggctcta ccgggaaaaa ctgaaagagc aggttgaggc gctgggctat gaaactgaag
     3781 tggtcggtaa gcacggtatg tgggaaatgc cgggtgtacc ggtggaggcc ttttccggac
     3841 gctcacagac tatccgggag gccgtcgggg aagacgcctc gctgaaatcc cgggatgtgg
     3901 cggcgctgga tacgcgtaaa tccaaacagc acgtcgatcc tgaagtcaga atggccgagt
     3961 ggatgcagac gctgaaggaa accgggttcg acatccgggc atatcgtgac gcagcggaac
     4021 aacgggcata tacccgcacg cagacacccg gacccgcttc acaggacggg ccggatgtgc
     4081 agcaggcggt gacacaggcc attgccggat taagtgaacg caaagtgcag tttatgtata
     4141 cggacctgct ggccaggacg gtcggcatac tgccgccgga aaatggtgtg attgaacggg
     4201 cacgcgccgg tatcgatgag gccatcagcc gtgagcagct tatccccctc gatcgtgaga
     4261 aggggctgtt cacgtccggg attcatatgc tcgatgagct gtcagtccgg gcactcagtc
     4321 gtgacatcat gaaacagaac cgggtgaccg tacatccgga gaaaagtgtc ccccggacgg
     4381 ccggttacag cgatgccgtc agtgttctgg cacaggaccg tccgtcgctg gccattgtgt
     4441 ccgggcaggg cggtgcagcc gggcatcgtg agcgggtggc tgaactggtc atgatggccc
     4501 gggagcaggg gcgggaggtg cagattatcg ctgctgaccg tcgctcgcag atgaacctga
     4561 agcaggatga acggctgtcc ggtgaactga taaccggacg tcgtcagttg ctggaaggca
     4621 tggccttcac gccgggcagt accgttatcg tcgaccaggg cgaaaaactc tccctgaaag
     4681 agacgttaac cctgctggat ggtgccgcac gtcataacgt acaggtcctg ataactgaca
     4741 gcgggcagcg aaccggtaca ggcagtgcac tgatggccat gaaggatgcc ggggtgaaca
     4801 catatcgctg gcagggggga gaacagcgac cggccaccat catcagtgaa ccggaccgtt
     4861 atgtccgcta tgcccggctg gccggagatt ttgcggccag cgtgaaagcc ggagaagaga
     4921 gcgtggcaca ggtcagcgga gtacgggaac aggccatact gacacaggcc attcgcagtg
     4981 agctgaaaac acagggcgtg ctcggacacc cggaggtaac catgaccgcc ctgtcaccgg
     5041 tctggctgga cagccggagc cgttatctgc gggatatgta ccgcccggga atggtgatgg
     5101 agcagtggaa cccggagaca cgcagtcatg accgctatgt gacagaacgt gtgacggcgc
     5161 agagtcacag cctgaccctg cggaatgcgc agggcgaaac gcaggtggtg cgtatttctt
     5221 ccctggacag cagctggtcg ctgttccggc cggaaaaaat gccggtggca gacggtgagc
     5281 gtctgagggt gacagggaaa attcccggac tccgcgtctc cggcggtgac cgcctgcagg
     5341 tggcatccgt cagtgaagat gcgatgacgg ttgttgtgcc gggacgggct gaaccggcca
     5401 ccctgcctgt gagcgattca ccgttcacgg cactgaagct ggagaacggc tgggtggaaa
     5461 cgcccgggca ttccgtcagc gacagtgcga cggtttttgc ctccgtcaca cagatggcaa
     5521 tggacaatgc caccctgaac ggtctggccc gcagtggtcg tgatgtccgg ctgtattcct
     5581 cactggatga aacccgtact gcggaaaaac ttgcccgcca tccctccttt acggtggttt
     5641 ctgagcagat aaaggcgcgt gccggtgaga cattgctgga aaccgctatc agtctgcaga
     5701 aagccgggct tcacacgccg gcacagcagg ccattcatct ggcccttcct gtgctggaaa
     5761 gtaaaaacct ggccttcagc atggtggacc tgctgacaga ggcgaagtcg tttgctgcag
     5821 aaggaaccgg ttttgctgac ctgggagggg aaatcaatgc gcagataaaa cggggtgatt
     5881 tactgtatgt ggatgtggca aaaggctatg gcacaggcct gctggtttcc cgtgcgtcgt
     5941 atgaggcaga aaagagcatt cttcgccata ttctcgaagg taaggaagcg gtcacgccgc
     6001 tgatggagag agtacctggc gaactcatgg agaaactgac atcaggacag cgcgccgcca
     6061 cccgtatgat actggaaacg tccgaccgtt tcacggtggt gcagggctat gccggtgtgg
     6121 gtaagaccac acagttccgg gcggtgatgt cagccgtgaa catgctgccg gagagtgaac
     6181 gtccccgtgt cgtggggctg gggcccacac accgtgcggt cggggagatg cgcagcgccg
     6241 gcgtggatgc acagacactg gcgtcctttc tgcatgacac gcagctgcag cagcgcagcg
     6301 gagaaatacc ggatttcagc aacacgctgt tcctgctcga tgagagctca atggtgggca
     6361 ataccgacat ggcacgggca tatgccctga ttgcggccgg tggcggtcgg gctgtggcca
     6421 gcggtgacac ggaccagctg caggccatcg cgcccggtca gcctttccgt ctccagcaga
     6481 cgcgcagtgc tgccgatgtg gtcatcatga aggagattgt gcgtcagacg ccggaactgc
     6541 gggaggcggt atacagcctg attaaccggg atgtggaaag ggcgctgtcc gggcttgagc
     6601 gtgtgaaacc gtctcaggtg ccacgtctgg agggcgcatg ggcaccggag cactccgtga
     6661 cggagttcag tcacagctag gaagcgaaac tggcagaagc gcagcagaag gcgatgctga
     6721 aaggcgaggc ttttccggat gtccccatga cactgtatgc agccattgtc cgcgactata
     6781 ccggcaggac accggaagca cgggagcaga cgctgattgt cacgcacctg aatgaggacc
     6841 ggcgcgtact gaacagcatg attcatgatg cacgggaaaa ggccggagaa ctggggcagg
     6901 tgcaggtcat ggtgcctgtc ctgaacacag cgaatatacg cgacggggag ctgcgtcgtc
     6961 tctccacctg ggagaataac ccggatgccc ttgccctggt ggataatgtg tatcaccgga
     7021 ttgccggtat cagcaaggat gacgggctga taaccctgca ggatgcggaa ggtaacacgc
     7081 ggctgatttc gccccgggag gcggtggctg aaggcgtcac gctgtacacc ccggacacca
     7141 tccgggtggg gaccggtgac aggatacgct tcacgaagag tgaccgggag cgcggttatg
     7201 tggccaacag cgtctggacg gtgacagcgg tttccggtga cagtgtcaca ctttctgacg
     7261 gtcagcagac ccgtgtgatt cgccccggtc aggagcgggc agagcaacat attgacctgg
     7321 cctatgccat caccgcccat ggtgcacagg gggcgagtga aacctttgcc atcgcgcttg
     7381 aaggcacgga aggtaaccgg aaactgatgg ccggctttga gtcagcctac gtggccctgt
     7441 cgcgtatgaa gcagcatgtg caggtgtaca ccgataaccg tcagggctgg acggatgcca
     7501 tcaacaatgc cgtacagaaa ggaactgccc acgatgtgtt tgagccgaaa ccggaccggg
     7561 aggtcatgaa tgcagagcgg ctgttcagta cggcgcggga gctgcgggac gtggcggcag
     7621 gccgtgccgt tctccgtcag gcggggctgg ccgggggaga cagtcctgca cggtttattg
     7681 ctccgggacg taaatatccg caaccgtatg tggcactgcc ggcgtttgac cgtaacggca
     7741 agtccgccgg tatctggctg aacccgctga ccacggatga cggaaacggg ctgcggggat
     7801 tcagcggtga aggtcgggta aaaggtagcg gggatgcgca gttcgtggcc ctgcagggca
     7861 gccgtaacgg agaaagcctg ctggctgata atatgcagga tggcgtccgg attgcccgtg
     7921 ataatcctga cagtggtgtg gtggtaagaa tcgccggtga aggccgtccg tggaatcccg
     7981 gtgccatcac cggtggccgc gtgtgggggg atatcccgga caacagcgtc cagccgggag
     8041 ccggaaatgg cgaaccggtc acggcagagg tactggcaca gcggcaggct gaagaggcca
     8101 tccgccgtga aacggaacgt cgcgcagatg aaattgtccg taaaatggca gagaacaaac
     8161 ctgacctgcc ggacggcaaa acagagcagg ctgtcaggga aattgccggg caggagcgtg
     8221 accgggctgc cataactgaa cgggaagccg cgctgccgga gagtgtactg cgtgaaccac
     8281 aacgggtgcg ggaagcggtc tgggaagttg cccgggaaaa tttgctgcag gagcgtctgc
     8341 agcagatgga gcgggatatg gttcgtgacc tgcagaaaga gaaaaccccg ggcggagact
     8401 gatacaggaa gacaaacact gatgacaacg gataacacga acacgacacg taacgattca
     8461 ctggctgcac ggaccgatac ctggttgcag tcatttctgg tctggtcacc cggacagcgg
     8521 gatatcatca aaacggtggc actggtgctg atggtactgg accacatcaa tctgatattc
     8581 cagctgaagc aggaatggat gtttctggcc gggcgaggag cctttccgct ttttgccctg
     8641 gtgtgggggc tgaatctgtc ccgtcatgcg catatccggc aaccggccat taaccggctg
     8701 tggggatggg gaattattgc ccagttcgca tattatctgg caggctttcc ctggtatgag
     8761 gggaatatcc tgtttgcctt tgcagtggcg gcacaggtgc tgacgtggtg tgaaacgcgc
     8821 agtgggtggc gtacagcagc ggccatactc ctgatggccc tgtgggggcc tttgtccggc
     8881 accagttacg gtattgccgg gttgctgatg ctggcagtca gcaaccggct gtaccgggcg
     8941 gaagacagag cggaacgtct ggcgctggtc gcctgcctgc tggctgttat tccggcgctt
     9001 aaccttgcca ccagtgatgc agcggcggtg gccggtcttg tgatgacggt gctgaccgtt
     9061 ggtctggtgt tgtgtgccgg aaaatcatta ccccgtttct ggcccggaga ctttttcccg
     9121 acgttctatg cctgtcatct ggctgtgctg ggcgttctgg cgctgtgacg ggtgtggtat
     9181 ctttggccgc aagaggatga ttcgtcagag gcagaacaca gcatgacaga gcagaagcga
     9241 ccggtactga cactgaagcg gaagacagag ggaacagcga ctgtccgcag ccggaaaacc
     9301 atcatcaatg tcaccacgcc accaaagtgg aaggtgaaaa agcagaagct ggccgagaaa
     9361 gcggcccgtg aagcagagct ggcggcaaaa aaagcgcagg ccagacaggc gctgtccatt
     9421 tatctgaacc tgcccacgct ggatgaggct gtgaataccc tgaagccctg gtggccggga
     9481 ttatttgacg gtgacacgcc ccggcttctg gcctgcggta tccgggacgt gttactggaa
     9541 gacgtggcgc agcggaatat cccgctctcg cataaaaaac tgcgcagggc gctgaaggcc
     9601 atcacccgtt cagaaagcta tctgtgtgcc atgaaagccg gtgcctgccg gtatgacacg
     9661 gaagggtatg tgacggagca tatttctcag gaggaggaag cgtatgcggg agcgcgtctg
     9721 gcgaaaattc gtcgccagaa ccggataaag gcagaacttc aggccgtgct tgatgagaaa
     9781 taaaaaaagc ctcccccaga gagaggaggc agggaaataa ggcttaaaag gaaataactt
     9841 ccgcttccga aaggaagcca gtccactgaa ttatttatca caataatact gacaactaaa
     9901 gggggacaag aaaatgaatg gattcagaaa cagttcacgg aacggccagg tctggcgtta
     9961 ccagcgtgcc ggcgggcggg ccgttattct ggaagtcagt ggacgctgga tggaagcggc
    10021 agaagcatgg cgacgggctg cctgtgttgc gcctaggaca gactggcagc agtttgcccg
    10081 gaaaagggct gaacactgcc accggcgctg ccggggaagg gggtaacgaa aaaagcagcc
    10141 ttcattactc caggagtcag aaggctgaaa ggagtttatg agatttgctt cttaatatcc
    10201 ggtcgggcag tatgaccgga cagttctgag tagcacagag tcttttccgc attaagtcga
    10261 ttttttatat tttgtgatta atttcacaaa ataaggtgtt attcaatgtg tgctgcacta
    10321 ttcagggggg ctgaaataca ggtgccattt atctgatatg gagaataaca tgaggaaata
    10381 tattccactg gtattattta tcttttcatg gccggtattg tctgcagata ttcatggacg
    10441 ggttgttcgt gtactggacg gtgataccat cgaggtcatg gactcactga aggcggtgcg
    10501 gatcaggctg gtaaatattg atgcaccgga aaagaaacag gattatggcc ggtggtcaac
    10561 agacatgatg aaatcactgg tcgcaggaaa aacggttacc gtcacatatt ttcagcgaga
    10621 tcgttatggt cgtattctcg ggcaggttta tgcaccagac ggaatgaata ttaatcagtt
    10681 tatggtccgg gccggggctg cctgggtata tgagcagtac aacacagatc ccgtgctacc
    10741 tgtccttcag aacgaagcca gacaacaaaa acgtgggctc tggtcagatg ctgatccggt
    10801 tcccccctag atatggaggc accgtaaata aagcgatggc aatcctatca ttcatctgtt
    10861 ctcagcggga ataaaaatgg caaaaacaaa acaggaatgg ctgtatcagt tacggcgatg
    10921 ttcatcagtc aatacgctgg aaaaaattat tcataaaaac agagacagtt tatcaaacag
    10981 agaacgtgaa tcatttaatt cagcagcaga ccaccggcta gcggaattaa tcaccggaaa
    11041 gttatatgac aggataccaa aagagatatg gaaa
//
LOCUS       DADMHC010000129        10946 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.130, whole genome shotgun sequence.
ACCESSION   DADMHC010000129 DADMHC010000000
VERSION     DADMHC010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10946)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10946)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10946
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.130"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..862
                     /locus_tag="JNZ57_002822"
     CDS             <1..862
                     /locus_tag="JNZ57_002822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001243518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transcriptional antiterminator"
                     /protein_id="HAY8828977.1"
                     /translation="QRLAQDLGLTKSKHIRHDLVAERVRQTFSDEALEKLDLKLAENK
                     DTCWLKSIFRKHRKAFSYLQHSIVWQALLPKLTVIEALQQASALTEHSITTRPVSQSV
                     QPNSEDLSVKHKDWQQLVHKYQGIKAARQSLEGGVLYAWLYRHDRDWLVHWNQQHQQE
                     RLAPAPRVDWNQRDRIAVRQLLRIIKRLDSSLDHPRATSSWLLKQTPNGTSLAKNLQK
                     LPLVALCLKRYSESVEDYQIRRISQAFIKLKQEDVELRRWRLLRSATLSKERITEEAQ
                     RFLEMVYGEE"
     gene            863..2479
                     /locus_tag="JNZ57_002823"
     CDS             863..2479
                     /locus_tag="JNZ57_002823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000251878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional antiterminator"
                     /protein_id="HAY8828978.1"
                     /translation="MVRLATFNDNVQVVHIGHLFRNSGHKEWRIFVWFNPMQERKWTR
                     FTHLPLLSRAKVVNSTTKQINKADRVIEFEASDLQRAKIIDFPNLSSFASVRNKDGAQ
                     SSFIYEAETPYSKTRYHIPQLELARSLFLINSYFCRSCLSSTALQQEFDVQYEVERDH
                     LEIRILPSSSFPKGALEQSAVVQLLVWLFSDQDVMDSYESIFRHYQQNREIKNGVESW
                     CFSFDPPPMQGWKLHVKGRSSNEDKDYLVEEIVGLEINAMLPSTTAISHASFQEKEAG
                     DGSTQHIAVSTESVVDDEHLQLDDEETANIDTDTRVIEAEPTWISFSRPSRIEKSRRA
                     RKSSQTILEKEEATTSENSNLVSTDEPHLGGVLAAADVGGKQDATNYNSIFANRFAAF
                     DELLSILKTKFACRVLFEETLVLPKVGRSRLHLCKDGSPRVIKAVGVQRNGSEFVLLE
                     VDASDGVKMLSTKVLSGVDSETWRNDFEKIRRGVVKSSLNWPNSLFDQLYGQDGHRGV
                     NHPKGLGELQVSREDMEGWAERVVREQFTH"
     gene            complement(2535..2687)
                     /locus_tag="JNZ57_002824"
                     /pseudo
     CDS             complement(2535..2687)
                     /locus_tag="JNZ57_002824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011069623.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(2710..3087)
                     /locus_tag="JNZ57_002825"
     CDS             complement(2710..3087)
                     /locus_tag="JNZ57_002825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001271300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828979.1"
                     /translation="MSAAKALAYALCDKLESKKVDEVVRNLVSSGWNIREVAWEASSF
                     DHEMPYFDTGRDFDIGFPDTLSSKIEFLTANGSIVQARARLHFKQALIFAKASKHVAA
                     LKNSLDYYYGSSVIPPQNHGGYL"
     gene            complement(3497..3868)
                     /locus_tag="JNZ57_002826"
     CDS             complement(3497..3868)
                     /locus_tag="JNZ57_002826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000119696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828980.1"
                     /translation="MSYEPPRDGYTNGYIVDVMYDNRPSKYPAVFRTYVRIPDYVELD
                     NAEELADAIIREVELKEAWLTRVLGNSADPDASVGKWDRRLAQCGGIDEMSSGVQATY
                     FSPNGQLVGLVAYIDAEWMDE"
     gene            complement(3929..4426)
                     /locus_tag="JNZ57_002827"
     CDS             complement(3929..4426)
                     /locus_tag="JNZ57_002827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001444089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8828981.1"
                     /translation="MRDLLKVVLSLVLAMASGQALADLPIVLVDEARLPYDYSPSNYD
                     ISPSNYDNSISNYDNSPSNYDNSESNYDNSSSNYDNSRNGNRRLIYSANGSRTFAGYY
                     VIANNGTTNFFSTSGKRMFYTPKGGRGVYGGKDGSFCGALVVINGQFSLALTDNGLKI
                     MYLSN"
     gene            complement(4502..5290)
                     /gene="aadA1"
                     /locus_tag="JNZ57_002828"
     CDS             complement(4502..5290)
                     /gene="aadA1"
                     /locus_tag="JNZ57_002828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANT(3'')-Ia family aminoglycoside
                     nucleotidyltransferase AadA1"
                     /protein_id="HAY8828982.1"
                     /translation="MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKP
                     HSDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYP
                     AKRELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQ
                     DLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPA
                     QYQPVILEARQAYLGQEDRLASRADQLEEFVHYVKGEITKVVGK"
     gene            complement(5348..5872)
                     /gene="sat2"
                     /locus_tag="JNZ57_002829"
     CDS             complement(5348..5872)
                     /gene="sat2"
                     /locus_tag="JNZ57_002829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000704156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="streptothricin N-acetyltransferase Sat2"
                     /protein_id="HAY8828983.1"
                     /translation="MKISVIPEQVAETLDAENHFIVREVFDVHLSDQGFELSTRSVSP
                     YRKDYISDDDSDEDSACYGAFIDQELVGKIELNSTWNDLASIEHIVVSHTHRGKGVAH
                     SLIEFAKKWALSRQLLGIRLETQTNNVPACNLYAKCGFTLGGIDLFTYKTRPQVSNET
                     AMYWYWFSGAQDDA"
     gene            complement(5967..6440)
                     /locus_tag="JNZ57_002830"
     CDS             complement(5967..6440)
                     /locus_tag="JNZ57_002830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001355915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethoprim-resistant dihydrofolate reductase
                     DfrA1"
                     /protein_id="HAY8828984.1"
                     /translation="MKLSLMVAISKNGVIGNGPDIPWSAKGEQLLFKAITYNQWLLVG
                     RKTFESMGALPNRKYAVVTRSSFTSDNENVLIFPSIKDALTNLKKITDHVIVSGGGEI
                     YKSLIDQVDTLHISTIDIEPEGDVYFPEIPSNFRPVFTQDFASNINYSYQIWQKG"
     gene            6772..7308
                     /locus_tag="JNZ57_002831"
     CDS             6772..7308
                     /locus_tag="JNZ57_002831"
                     /inference="COORDINATES: protein motif:HMM:NF024886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 2 integron integrase IntI2"
                     /protein_id="HAY8828985.1"
                     /translation="MSNSPFLNSIRTDMRQKGYALKTEKTYLHWIKRFILFHKKRHPQ
                     TMGSEEVRLFLSSLANSRHVAINTQKIALNALAFLYNRFLQQPLGDIDYIPASKPRRL
                     PSVISANEVQRILQVMDTRNQVIFTLLYGAGLRINECLRLRVKDFDFDNGCITVHDGK
                     GGKSRNSLLPTRLIPAIK"
     gene            7423..7749
                     /locus_tag="JNZ57_002832"
     CDS             7423..7749
                     /locus_tag="JNZ57_002832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000497519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY8828986.1"
                     /translation="MFVFPSSTLCNHPYNGKLCRHHLHDSVARKALKAAVQKAGIVSK
                     RVTCHTFRHSFATHLLQAGRDIRTVQELLGHNDVKTTQIYTHVLGQHFAGTTSPADGL
                     MLLINQ"
     gene            complement(7937..8176)
                     /locus_tag="JNZ57_002833"
     CDS             complement(7937..8176)
                     /locus_tag="JNZ57_002833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001353740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1819 family protein"
                     /protein_id="HAY8828987.1"
                     /translation="MTPFRYNSDLTSGSLQTRECRIITGLLLQELDEAAWDKAMYKEN
                     VLQKRTQSTVRRISSALRKRLEHLSSDFWAFAFLC"
     gene            8967..9539
                     /locus_tag="JNZ57_002834"
     CDS             8967..9539
                     /locus_tag="JNZ57_002834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long polar fimbria major subunit LpfA-O113"
                     /protein_id="HAY8828988.1"
                     /translation="MKRNIIGGAFTLASLMLAGHALAEDGVVHFVGEIVDTTCEVTSD
                     TADQIVPLGKVSKNAFSGVGSLASPQKFSIKLENCPATYTQAAVRFDGTEAPGGDGDL
                     KVGTPLTAGNPGDFTGTGQAIAATGVGIRIFNQSDNSQVKLYNDSAYTAIDAEGKAEM
                     KFIARYVATNATVTAGTANADSQFTVEYKK"
     gene            9587..10318
                     /locus_tag="JNZ57_002835"
     CDS             9587..10318
                     /locus_tag="JNZ57_002835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001572122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
                     /protein_id="HAY8828989.1"
                     /translation="MSRKSCLIRLFKTTVSCKLFTAIILSIFLGQPALTYAGVVIGGT
                     RGVYLSNNADKSISVFSKEEKIPYLIQAWVDPFNKEDKSKAPFTVIPPVSRLEPSQEK
                     ILRIIHTKGVSLPDYRESVFWLNIKNIPPSASNKATNSLEIAVKTRIKLFWRPANIRL
                     IPEDAAPKVKWRREGRNLIAENPNPIHISVMDVIVDGHDVPLNMIRPFETLTLPLPAN
                     SAGGQMTWRFINDYGAVSDPIKMTL"
     gene            10343..>10946
                     /locus_tag="JNZ57_002836"
     CDS             10343..>10946
                     /locus_tag="JNZ57_002836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HAY8828990.1"
                     /translation="MMTTRIVVGLTAGTCLIFSQNLMAEVSVFNPALLEIDHQSGVDI
                     RQFNRANLMPPGVYSVDIFINGKMFERQDVTFVQNNPDADLHACFIAIKKTLSSFGIK
                     VDALKSFNDVDETVCLDPAPRIEGSSWQFDSDKLQLNISIPQIYMDAMAYDYISPTRW
                     DEGINALTINYDFSGSHTLRSDYGSQETDTSYLNLRNGLNI"
BASE COUNT         3020 a         2370 c         2519 g         3037 t
ORIGIN      
        1 tcagcgctta gcgcaggatc tagggctaac caaaagcaag cacattcgtc atgacttggt
       61 ggcggagaga gtgaggcaga cttttagtga tgaggcacta gagaaactgg atttaaagtt
      121 ggcagagaac aaggacacgt gttggctgaa aagtatattc cgtaagcata gaaaagcctt
      181 tagttattta cagcatagta ttgtgtggca agccttattg ccaaaactaa cggttataga
      241 agcgctacag caggcaagtg ctcttactga gcactctata acgacaagac ctgttagcca
      301 gtctgtgcaa cctaactctg aagatttatc tgttaagcat aaagactggc agcaactagt
      361 gcataaatac caaggaatta aggcggcaag acagtcttta gagggtgggg tgctatacgc
      421 ttggctttac cgacatgaca gggattggct agttcactgg aatcaacagc atcaacaaga
      481 gcgtctggca cccgccccta gagttgattg gaaccaaaga gatcgaattg ctgtacgaca
      541 actattaaga atcataaagc gtctagatag tagccttgat cacccaagag cgacatcgag
      601 ctggctgtta aagcaaactc ctaacggaac ctctcttgca aaaaatctac agaaactgcc
      661 tttggtagcg ctttgcttaa agcgttactc agagagtgtg gaagattatc aaattagacg
      721 gattagccaa gcttttatta agcttaaaca ggaagatgtt gagcttaggc gctggcgatt
      781 attaagaagt gcaacgttat ctaaagagcg gataactgag gaagcacaaa gattcttgga
      841 aatggtttat ggggaagagt gagtggttag gctagctaca tttaatgaca atgtgcaggt
      901 tgtacatatt ggtcatttat tccgtaactc gggtcataag gagtggcgta tttttgtttg
      961 gtttaatcca atgcaagaac ggaaatggac tcgatttact catttgcctt tattaagtcg
     1021 agctaaggtg gttaacagta caacaaagca aataaataag gcggatcgtg tgattgagtt
     1081 tgaagcatcg gatcttcaac gagccaaaat aatcgatttt cctaatctct cgtcctttgc
     1141 ttccgtacgc aacaaggatg gagcgcagag ttcatttatt tacgaagctg aaacaccata
     1201 tagcaagact cgttatcaca tcccacagtt agagctagct cggtcattat ttttaattaa
     1261 ctcctatttc tgtcgaagct gtttgagcag taccgcttta cagcaagagt tcgacgttca
     1321 gtatgaggtt gagcgagatc atttagagat aaggatctta cccagttcat cgtttcctaa
     1381 aggggcgtta gagcagtcgg ccgtagtgca gcttttggtt tggttgtttt cggatcaaga
     1441 tgttatggat tcgtatgaaa gtatttttag gcactatcaa caaaatagag aaattaagaa
     1501 cggcgttgaa agctggtgct ttagctttga ccctccgccc atgcagggtt ggaaattaca
     1561 tgtaaaagga cgttcttcta acgaggataa ggattattta gttgaggaaa tagtaggttt
     1621 agaaatcaac gctatgcttc ctagcacaac agctattagc catgcctctt ttcaggaaaa
     1681 ggaggcaggt gatggtagta cgcagcacat agcggtttca acagagtcag ttgttgatga
     1741 tgagcatcta cagttggacg atgaggaaac agccaatata gacacagaca cacgagtcat
     1801 agaggctgag ccgacatgga taagttttag tagacctagt cgaattgaaa aatctcgcag
     1861 ggcaagaaaa agtagccaaa ctattttaga aaaagaagaa gcaacaacaa gtgaaaatag
     1921 taatttggtt agtactgatg agccacactt aggtggtgtc ctagcagcgg cagatgtggg
     1981 tgggaagcag gatgcaacca attacaactc tatttttgct aatcgatttg ctgcttttga
     2041 tgagctactt tcaattctaa aaactaaatt tgcatgtcgg gtgctttttg aagaaacctt
     2101 ggttttgcca aaagttgggc gtagccgatt acatctgtgt aaagatggct caccaagagt
     2161 gattaaagcc gttggggtgc aacgtaatgg cagtgaattt gtattgctag aggtggatgc
     2221 atcggatggg gtgaaaatgc tttctaccaa agtgttgagt ggcgttgata gcgaaacatg
     2281 gcggaatgat tttgaaaaga tacggcgtgg agtggtgaag agctcattga attggccaaa
     2341 tagtttgttt gatcaattat atggacaaga cgggcataga ggggtgaatc atccaaaggg
     2401 gttgggggag ctgcaagtat cgagagagga tatggaaggg tgggctgaga gagtggttag
     2461 agagcaattt acgcattaaa ggaatgactg aaagagcctg taaacccttt tgtgtaagtg
     2521 cttttgccgg tcagttaaag gtggccattt aaacggtcac caaattcgat cataaaacgg
     2581 ttcatggccg gcttccagtt gcggatcggc atcgtccatt tcttggtcgc cgcctggata
     2641 gccaggtaca ccaccttcat cgctgattcg tccgtaggga acaccttgag ttcatattaa
     2701 tggaattttc tacaaatagc ctccgtggtt ttgagggggg attacagacg atccatagta
     2761 gtaatccaat gagttcttga gcgcggcgac atgtttggac gccttggcaa aaattagagc
     2821 ctgcttgaag tgcaggcgag cacgtgcttg gacgattgat ccattcgcgg tcaaaaactc
     2881 aatcttggat gacagcgtgt caggaaatcc aatatcgaag tcccgccccg tgtcaaagta
     2941 gggcatttca tgatcaaagg acgaagcttc ccaggccact tccctaatat tccagccgct
     3001 agaaacaaga tttcgtacga cttcatcaac ttttttgctt tccaacttgt cacaaagtgc
     3061 ataggcaaga gctttggcgg cagacacgtg cgtttcctct taaacatagg tcgaacggat
     3121 acccgaggca aagcggagca ttagtcccaa agcatctccg gtagatccgg aggctccata
     3181 ctgaaggcat ggcatcttgg gcattgatat ttgaaacttc tctctagata gcagggattt
     3241 cttggccttg cctcatgctg atagcttgta aatatcacac gatccttagc cccacaaagt
     3301 gagcatactc cgtagctttc atttatagaa atcgtcgtta gattgtcgca gcatgtgcac
     3361 gttccgacta tttgctcagg aagcatcgcc ataccttggc ctaggtaaag aagatcagac
     3421 tcgtagccac atcggtggca actgagcttg tacgcaatgc ccatctggtt gtctcacctg
     3481 aatcgtaacg tcagagctat tcatccatcc attcggcatc aatgtatgcc actaagccga
     3541 ccagctgacc gtttggactg aagtatgttg cctgcacccc acttgacatc tcatcaatac
     3601 caccgcactg cgctaggcgc cggtcccact tgcccacaga agcgtcagga tcggctgagt
     3661 tccccaagac ccttgtgagc catgcctcct ttaactcaac ctctcgaatg attgcgtcgg
     3721 ccagctcctc cgcgttatct agttcgacat agtctggaat tcggacgtac gttctgaaca
     3781 cagctggata cttacttggg cgattgtcat acatgacatc aacaatgtac ccgtttgtgt
     3841 aaccgtctct tggaggttcg tatgacacta gtggttcccc tcagcttgcg actagatgtt
     3901 gaggcctaac attttattag agagcaggct agttgcttag atacatgatc ttcaggccgt
     3961 tatctgtcag ggcaagcgaa aattggccat ttatgacgac caatgccccg cagaagctcc
     4021 catctttgcc gccatagacg ccgcgccccc cttttggggt gtagaacatc cttttgccag
     4081 atgtggaaaa gaagttcgtt gtcccattgt tggcaatgac gtagtagccg gcgaaagtgc
     4141 gagacccatt tgcgctatat ataagcctac gatttccgtt gcgactattg tcgtaattgg
     4201 atgaactatt atcgtagttg ctctcagagt tgtcgtaatt tgatggacta ttgtcgtaat
     4261 tgcttatgga gttgtcgtag ttgcttggag aaatgtcgta gttggatggg gagtagtcat
     4321 agggaagacg agcttcatcc actaaaacaa ttggcaggtc agcaagtgcc tgccccgatg
     4381 ccatcgcaag tacgaggctt agaaccacct tcaacagatc gcgcatagtc ttccccagct
     4441 ctctaacgct tgagttaagc cgcgccgcga agcggcgtcg gcttgaacga attgttagac
     4501 attatttgcc gactaccttg gtgatctcgc ctttcacgta gtgaacaaat tcttccaact
     4561 gatctgcgcg cgaggccaag cgatcttctt gtccaagata agcctgccta gcttcaagta
     4621 tgacgggctg atactgggcc ggcaggcgct ccattgccca gtcggcagcg acatccttcg
     4681 gcgcgatttt gccggttact gcgctgtacc aaatgcggga caacgtaagc actacatttc
     4741 gctcatcgcc agcccagtcg ggcggcgagt tccatagcgt taaggtttca tttagcgcct
     4801 caaatagatc ctgttcagga accggatcaa agagttcctc cgccgctgga cctaccaagg
     4861 caacgctatg ttctcttgct tttgtcagca agatagccag atcaatgtcg atcgtggctg
     4921 gctcgaagat acctgcaaga atgtcattgc gctgccattc tccaaattgc agttcgcgct
     4981 tagctggata acgccacgga atgatgtcgt cgtgcacaac aatggtgact tctacagcgc
     5041 ggagaatctc gctctctcca ggggaagccg aagtttccaa aaggtcgttg atcaaagctc
     5101 gccgcgttgt ttcatcaagc cttacggtca ccgtaaccag caaatcaata tcactgtgtg
     5161 gcttcaggcc gccatccact gcggagccgt acaaatgtac ggccagcaac gtcggttcga
     5221 gatggcgctc gatgacgcca actacctctg atagttgagt cgatacttcg gcgatcaccg
     5281 cttccctcat gatgtttaac tcctgaatta agccgcgccg cgaagcggtg tcggcttgaa
     5341 tgaattgtta ggcgtcatcc tgtgctcccg agaaccagta ccagtacatc gctgtttcgt
     5401 tcgagacttg aggtctagtt ttatacgtga acaggtcaat gccgccgaga gtaaagccac
     5461 attttgcgta caaattgcag gcaggtacat tgttcgtttg tgtctctaat cgtatgccaa
     5521 ggagctgtct gcttagtgcc cactttttcg caaattcgat gagactgtgc gcgactcctt
     5581 tgcctcggtg cgtgtgcgac acaacaatgt gttcgataga ggctagatcg ttccatgttg
     5641 agttgagttc aatcttcccg acaagctctt ggtcgatgaa tgcgccatag caagcagagt
     5701 cttcatcaga gtcatcatcc gagatgtaat ccttccggta ggggctcaca cttctggtag
     5761 atagttcaaa gccttggtcg gataggtgca catcgaacac ttcacgaaca atgaaatggt
     5821 tctcagcatc caatgtttcc gccacctgct cagggatcac cgaaatcttc atatgacgcc
     5881 taacgcctgg cacagcggat cgcaaacctg gcgcggcttt tggtacaaaa ggcgtgacag
     5941 gtttgcgaat ccgttgctgc cacttgttaa cccttttgcc agatttggta actataattt
     6001 atgttagagg cgaagtcttg ggtaaaaact ggcctaaaat tgctggggat ttcaggaaag
     6061 taaacatcac cttccggctc gatgtctatt gtagatatat gtagtgtatc tacttgatcg
     6121 atcaggcttt tgtatatctc cccaccacct gaaacaatga catgatccgt tattttcttt
     6181 aggttggtta aagcatcttt aattgatgga aagatcaata cgttctcatt gtcagatgta
     6241 aaacttgaac gtgttacgac cgcatacttt cggttgggta atgctcccat tgattcaaaa
     6301 gtcttgcgtc caaccaacag ccattggtta taggtaatag ctttaaacag gagctgttca
     6361 cctttggcac tccatggaat atcagggcca ttcccgataa ctccattctt cgatatagct
     6421 accattagtg atagtttcac aattcttcct cagaggttaa cattttatta gtaagcatgc
     6481 tcgttttgtc acccgctgat gcttaccgtt aattaatata atcacttgta ttaaatagac
     6541 tttctttaaa aatacaagac actctgttat tacaaatcgt gcatgccgtc tatcctgctt
     6601 gcacgatgca cattatctca cccaaagaac tcataacatt ttaatttatt tagcattaaa
     6661 ttaaaactct accggtaaac aagcatctct aggcgtaaaa aacaggcact tttttaaatc
     6721 ccagctagaa taggctgtat aggcagacag ttgcaagaca aggagcgttt tatgtctaac
     6781 agtccatttt taaattctat acgcacggat atgcgacaaa aaggttatgc gctgaaaact
     6841 gaaaaaactt acctgcactg gattaagcgt tttattctgt ttcacaaaaa acgtcatcct
     6901 cagaccatgg gcagtgaaga ggtcaggctg tttttatcca gcttagcaaa cagcagacat
     6961 gtagccataa acacgcagaa aatcgcttta aatgccctag cttttttgta caacaggttt
     7021 ttacaacagc cgttgggcga tattgattat atccctgcaa gcaagcctag acggctaccc
     7081 tctgttatct ctgcaaatga agtgcaacgc attttgcagg ttatggatac tcgcaaccaa
     7141 gttattttta cgctgctgta tggtgcaggt ttgcgcatta atgaatgctt gcgtttgcgg
     7201 gttaaagatt ttgattttga taatggctgc atcactgtgc atgacggtaa gggtgggaaa
     7261 agcagaaaca gcctactgcc cacgcgccta atcccagcaa taaaataact cattgagcaa
     7321 gcgcggctta ttcagcaaga cgacaactta caaggcgtag ggccatcgct gccttttgct
     7381 ttagatcaca aatacccttc tgcttatcga caagcggcgt ggatgtttgt ctttccctcc
     7441 agcacgctct gcaaccaccc gtataacggc aaattatgcc gccatcatct gcatgactcc
     7501 gttgcgcgaa aggcattgaa ggcagccgta caaaaagcag gcatcgttag caagcgtgtc
     7561 acttgtcata catttcgtca ctcgtttgct acgcatctat tacaagcggg gcgtgatatt
     7621 cgcactgtgc aagaactctt agggcataac gatgttaaga ccacgcaaat ctatacgcat
     7681 gtgttgggtc agcattttgc cggcaccacc agtcctgcgg atggactgat gctacttatc
     7741 aatcagtaaa agtagataaa tatctttatg tagccctgag tagcccctga tactttttat
     7801 ggtgaaaaag ataaacaatc atagagggga taaatatgag ccagttctac cattgttcag
     7861 ataagtttaa gcaagatact gtcaatcaca gtgaccattc atggtcatta cacttcctcc
     7921 agttgccaga caatgcctaa cataaaaacg caaaagccca aaagtcagag cttaggtgtt
     7981 ctaggcgttt tctaagcgct gaagaaatac gtcttaccgt agattgcgtg cgtttctgaa
     8041 gcacattttc cttatacatg gctttatccc aggcagcttc atcaagctct tggagtaaca
     8101 agccagtaat aatgcgacac tctcgggttt gtagcgagcc gctggtgaga tcggagttat
     8161 agcggaaagg ggtcatttgt aattatttgt gggtggagga tagttaactt attattgtag
     8221 ttggaagagg ctgctttcca aacattagca cctcgtaatg cttgttactg tatattaatt
     8281 tatgctctta gcgcatgtta atgggctatt acaatgcata atgtccacat caagataact
     8341 gtggcttaac acctgtacaa gcgaaaaaaa tcaatcacct gtccggaaat acgggatcac
     8401 tgtaaagtgt tggtgaggca gtctaggagg gggatttaat ttgggatact gatgaaagga
     8461 ttatgatcag ttggatatag gatcgtacta agctgagcgg caggttagct agattagtta
     8521 accagataag tgaaatctag ttccaaacta ttttgtcatt tttaattttc gtattagctt
     8581 acgacgctac acccagttcc catctatttt gtcactcttc cctaaataat ccttaaaaac
     8641 tccatttcca cccctcccag ttcccaacta ttttgtccgc ccacagggct gccgaccggt
     8701 ggcccttttt tataactgac atcaataaat tcatctatct ttctatataa atatattctg
     8761 aattatcatt aatgtctgat aacaaacttg attttttact gtttaaataa tatttaaaca
     8821 ataaatttat attttatttt tgcgtaatta atattatttt tagataaagc cgtctctttg
     8881 gtgtactatt cctttgaatc aaaaatacac ttattaatat aagtgatgat tcatggtaaa
     8941 ggatatatta tatcaatgga gtttttatga agcgtaatat tataggcggt gcattcactc
     9001 tggcatctct aatgctggcc gggcatgcac tggcagaaga tggtgttgtt cacttcgtcg
     9061 gtgaaattgt cgacactact tgtgaagtta cctccgatac agccgatcaa attgtcccac
     9121 tgggtaaagt cagtaaaaat gcattttcag gtgtaggtag tctggcgtcg ccacagaagt
     9181 tcagtattaa acttgaaaat tgcccggcaa cgtacactca agcagccgtt cgttttgatg
     9241 gtacagaagc gcctggcggc gacggcgacc tgaaagtggg tacgccgctt acagcaggca
     9301 accctggtga ttttaccggt acaggacaag cgattgcggc aaccggcgtt ggtattcgta
     9361 tttttaacca gtccgataat tcgcaggtta aactttataa cgactctgct tataccgcta
     9421 tcgatgctga aggcaaggct gaaatgaagt ttattgcacg ctatgtggca accaatgcga
     9481 ccgtaacggc tggtacggcg aacgctgatt cacaatttac tgtcgaatat aagaaataat
     9541 ttatcaaggg cctttttatt cagttggctt tggccaggga gtcgttatgt ccagaaaaag
     9601 ttgtttaatc aggctcttta aaacaacagt ttcatgtaag ttatttaccg cgattatact
     9661 cagcattttt ttaggccaac cagcattaac ttatgcaggc gttgtcattg gtggtacgcg
     9721 gggggtttac ttaagtaata atgctgataa atctatttct gtatttagca aagaagaaaa
     9781 aataccttat ctcatccaag cttgggtaga tccatttaat aaagaggata aaagcaaagc
     9841 gccgtttacc gttattccgc cagtatcacg attagaacct tcgcaagaaa aaatattacg
     9901 cattattcac accaaaggtg tgtcattgcc tgattatcgc gagtcagtct tctggctgaa
     9961 tattaaaaat attccgccat cagcgagcaa caaagcgacg aactcgctgg aaatagcagt
    10021 aaaaacgcgt atcaagctgt tctggcgacc agcaaatatc cgccttattc ccgaagatgc
    10081 tgcgccgaaa gtgaaatggc gccgggaagg gcgaaatctg atagcagaga atcccaaccc
    10141 aattcatatc agtgtgatgg atgtcatcgt tgatggccat gatgtgcccc tcaatatgat
    10201 ccgtcctttt gaaacgctca cgttaccttt acctgctaat tctgcgggag gccaaatgac
    10261 ctggcgattt attaatgatt acggcgcagt cagtgacccg ataaaaatga cgctgtaagc
    10321 aagggataag gataggcgta ttatgatgac gaccagaata gtggttggcc tcacggcagg
    10381 gacgtgtctg attttctcgc aaaacctgat ggccgaggtc agtgtattca atccggcgct
    10441 tctggaaatc gaccatcaat ccggagtcga tattcgccag tttaatcggg caaacctgat
    10501 gcccccaggt gtttatagcg ttgatatttt tatcaacggt aaaatgtttg aacgtcagga
    10561 tgtgacattt gttcagaata atccagatgc tgatctgcac gcttgcttta ttgccattaa
    10621 aaaaacactg tcctcctttg gcataaaagt tgatgcgctc aaatcgttca atgatgtgga
    10681 tgagacggtt tgcctcgatc ctgctccacg tattgaaggc tcatcctggc agtttgacag
    10741 tgataaattg cagctgaata tatccattcc ccaaatctac atggacgcga tggcttatga
    10801 ttacatcagc cccacgcgtt gggatgaggg gattaacgcg ctcaccatca actacgattt
    10861 ttctggttca catacactac gttcagatta tggttcacaa gagacagata ccagttatct
    10921 caatctgcgc aatggactga atattg
//
LOCUS       DADMHC010000130        10945 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.131, whole genome shotgun sequence.
ACCESSION   DADMHC010000130 DADMHC010000000
VERSION     DADMHC010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10945)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10945)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10945
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.131"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..532)
                     /locus_tag="JNZ57_002837"
     CDS             complement(<1..532)
                     /locus_tag="JNZ57_002837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HAY8828991.1"
                     /translation="MNTLPEHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEG
                     STFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGV
                     LFDTHVQPNGEESYHLTREGGHSHRRILHAADATGREVQSTLVSKAQNHPNIRVLERS
                     NAVDLIVSDKIGLPGTR"
     gene            788..943
                     /gene="rseD"
                     /locus_tag="JNZ57_002838"
     CDS             788..943
                     /gene="rseD"
                     /locus_tag="JNZ57_002838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rpoE leader peptide RseD"
                     /protein_id="HAY8828992.1"
                     /translation="MIRLQHDKQKQMRYGTLQKRDTLTLCLLKLQLMEWRFDSAWKFG
                     LGRLYLG"
     gene            940..1515
                     /gene="rpoE"
                     /locus_tag="JNZ57_002839"
     CDS             940..1515
                     /gene="rpoE"
                     /locus_tag="JNZ57_002839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005070454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoE"
                     /protein_id="HAY8828993.1"
                     /translation="MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVLSG
                     DVPDVVQEAFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIE
                     AENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIA
                     AIMDCPVGTVRSRIFRAREAIDNKVQPLIRR"
     gene            1548..2198
                     /gene="rseA"
                     /locus_tag="JNZ57_002840"
     CDS             1548..2198
                     /gene="rseA"
                     /locus_tag="JNZ57_002840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma-E factor RseA"
                     /protein_id="HAY8828994.1"
                     /translation="MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMR
                     GDTPEVLHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLT
                     QMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANN
                     GQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ"
     gene            2198..3154
                     /gene="rseB"
                     /locus_tag="JNZ57_002841"
     CDS             2198..3154
                     /gene="rseB"
                     /locus_tag="JNZ57_002841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-E factor regulatory protein RseB"
                     /protein_id="HAY8828995.1"
                     /translation="MKQLWFAMSLVTGSLLFSANASATPASGALLQQMNLASQSLNYE
                     LSFISINKQGVESLRYRHARLDNRPLAQLLQMDGPRREVVQRGDEISYFEPGLEPFTL
                     NGDYIVDSLPSLIYTDFKRLSPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWM
                     DTESKLPMRVDLLDRDGETLEQFRVIAFNVNQDISSSMQTLAKANLPPLLSVPVGEKA
                     KFSWTPTWLPQGFSEVSSSRRPLPTMDNMPIESRLYSDGLFSFSVNVNRATPSSTDQM
                     LRTGRRTVSTSVRDNAEITIVGELPPQTAKRIAENIKFGAAQ"
     gene            3151..3630
                     /gene="rseC"
                     /locus_tag="JNZ57_002842"
     CDS             3151..3630
                     /gene="rseC"
                     /locus_tag="JNZ57_002842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SoxR-reducing system protein RseC"
                     /protein_id="HAY8828996.1"
                     /translation="MIKEWATVVSWQNGQALVSCDVKASCSSCASRAGCGSRVLNKLG
                     PQTTHTIVVPCDEPLVPGQKVELGIAEGSLLSSALLVYMSPLVGLFLIASLFQLLFAS
                     DVAALCGAVLGGIGGFLIARGYSRKFAARAEWQPIILSVALPPGLVRFETSSEDASQ"
     gene            3828..5627
                     /gene="lepA"
                     /locus_tag="JNZ57_002843"
     CDS             3828..5627
                     /gene="lepA"
                     /locus_tag="JNZ57_002843"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010434076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HAY8828997.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSM
                     DLERERGITIKAQSVTLDYKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVV
                     DAGQGVEAQTLANCYTAMEMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVR
                     CSAKTGVGVQDVLERLVRDIPPPEGDPEGPLQALIIDSWFDNYLGVVSLIRIKNGTLR
                     KGDKVKVMSTGQTYNADRLGIFTPKQVDRTELKCGEVGWLVCAIKDIHGAPVGDTLTL
                     ARNPAEKALPGFKKVKPQVYAGLFPVSSDDYEAFRDALGKLSLNDASLFYEPESSSAL
                     GFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVETTSREVIYVDSPSKLPA
                     VNNIYELREPIAECHMLLPQAYLGNVITLCVEKRGVQTNMVYHGNQVALTYEIPMAEV
                     VLDFFDRLKSTSRGYASLDYNFKRFQASDMVRVDVLINGERVDALALITHRDNSQNRG
                     RELVEKMKDLIPRQQFDIAIQAAIGTHIIARSTVKQLRKNVLAKCYGGDISRKKKLLQ
                     KQKEGKKRMKQIGNVELPQEAFLAILHVGKDNK"
     gene            5643..6617
                     /gene="lepB"
                     /locus_tag="JNZ57_002844"
     CDS             5643..6617
                     /gene="lepB"
                     /locus_tag="JNZ57_002844"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HAY8828998.1"
                     /translation="MANMFALILVIATLVTGILWCVDKFFFVPKRRERQAAAQAAAGD
                     SLDKATLKKVAPKPGWLETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFI
                     LVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDP
                     VSKELTIQPGFSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETK
                     ENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNR
                     DNSADSRYWGFVPEANLVGRATAIWMSFDKQEGEWPTGVRLSRIGGIH"
     gene            6890..7570
                     /gene="rnc"
                     /locus_tag="JNZ57_002845"
     CDS             6890..7570
                     /gene="rnc"
                     /locus_tag="JNZ57_002845"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003848606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HAY8828999.1"
                     /translation="MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLG
                     DSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELK
                     SGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRL
                     QEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQ
                     ALKKLELE"
     gene            7567..8472
                     /gene="era"
                     /locus_tag="JNZ57_002846"
     CDS             7567..8472
                     /gene="era"
                     /locus_tag="JNZ57_002846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HAY8829000.1"
                     /translation="MSIDKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTR
                     HRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWT
                     PDDEMVLNKLRDGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGL
                     NVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEI
                     ERFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLE
                     LWVKVKSGWADDERALRSLGYVDDL"
     gene            8484..9212
                     /gene="recO"
                     /locus_tag="JNZ57_002847"
     CDS             8484..9212
                     /gene="recO"
                     /locus_tag="JNZ57_002847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HAY8829001.1"
                     /translation="MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRS
                     TLKGALQPFTPLLLRFGGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEY
                     ETRFSELFFDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTYCAGSGEPVDD
                     TMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLG
                     GKPLKSRELFRQFMPKRTVKTHYE"
     gene            9224..9955
                     /gene="pdxJ"
                     /locus_tag="JNZ57_002848"
     CDS             9224..9955
                     /gene="pdxJ"
                     /locus_tag="JNZ57_002848"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HAY8829002.1"
                     /translation="MAELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITV
                     HLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKRQEVT
                     TEGGLDVAGQREKMRDACKRLTDAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYA
                     DAKTDAEQAQELVRIAKAATFAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAI
                     IGRAVMTGLKDAVAEMKRLMLEARG"
     gene            9955..10335
                     /locus_tag="JNZ57_002849"
     CDS             9955..10335
                     /locus_tag="JNZ57_002849"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HAY8829003.1"
                     /translation="MAILGLGTDIVEIARIEAVIARSGERLARRVLSDNEWAIWKTHH
                     QPVRFLAKRFAVKEAAAKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKL
                     GVVNMHVTLADERHYACATVIIES"
     gene            10755..10835
                     /gene="shoB"
                     /locus_tag="JNZ57_002850"
     CDS             10755..10835
                     /gene="shoB"
                     /locus_tag="JNZ57_002850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin ShoB"
                     /protein_id="HAY8829004.1"
                     /translation="MTDCRYLIKRVIKIIIAVLQLILLFL"
BASE COUNT         2761 a         2664 c         2915 g         2605 t
ORIGIN      
        1 gtcgcgtgcc cggcaggcca attttgtcag agacaatcag atcaactgcg ttgctgcgct
       61 ccagcacacg aatattcgga tggttctgcg ccttgctcac cagcgtggat tgtacttctc
      121 taccggtggc gtcggcggca tgaagaatac gacggtgact atgtccacct tcacgggtca
      181 gatggtagct ttcttcgcca ttcggttgaa cgtgggtatc aaacaaaacc ccctggtcaa
      241 ttaaccattg cacacaggaa cgagcattgc tggcgacaaa ttcaactgca tggcgatcgc
      301 aaataccagc cccggcaatc aatgtgtctt ccacatgcga gtcaatgctg tcagtttcat
      361 caaacacggc ggcaataccg ccctgggcat aaaatgttga accttccgtt accgggcctt
      421 tacttagaac gatgacctga tgctggtcag ccaggcgtag cgccagtgaa agtccggctg
      481 cgccgctacc aataatcaac acgtcacatg aatgttcagg gagagtattc attttctttg
      541 tttaatttac taaacacggt ttggtcggta tagcatcatg ttgtgcgaat aaacacctgc
      601 tattttaata tttgttacag ttgctaaaca cgctgatgca gggcggcgag aaaaagagaa
      661 gttactggct ggtggaggat taggtggtga aataaaaagg ccgttgggtt actcttcagg
      721 cagttaaatg ggcatttcta cacagataat gcgatgttca gattctgtag acttataatg
      781 atagataatg atccgtctac agcatgacaa acaaaaacag atgcgttacg gaactttaca
      841 aaaacgagac actctaaccc tttgcttgct caaattgcag ctaatggagt ggcgtttcga
      901 tagcgcgtgg aaatttggtt tggggagact ttacctcgga tgagcgagca gttaacggac
      961 caggtcctgg ttgaacgggt ccagaaggga gatcagaaag cctttaactt actggtagtg
     1021 cgctatcagc ataaagtggc gagtctggtt tcccgctatg tgctgtcggg tgatgttccc
     1081 gatgtggtac aagaagcttt tattaaagcc tatcgtgcgc tggattcgtt ccggggagat
     1141 agcgcttttt atacatggct gtatcggatt gctgtaaata cagcgaaaaa ttacctggtt
     1201 gctcaggggc gtcgtccacc ttccagtgat gtggatgcca ttgaagctga aaacttcgaa
     1261 agtggcggcg cgttgaaaga aatttcgaac cctgagaact taatgttgtc agaagaactg
     1321 agacagatag ttttccgaac tattgagtcc ctcccggaag atttgcgcat ggcaataacc
     1381 ttgcgggagc tggatggcct gagctatgaa gagatagccg ctatcatgga ttgtccggta
     1441 ggtacggtgc gttcacgtat cttccgagcg agggaagcta ttgataacaa agttcaaccg
     1501 cttatcaggc gttgacgata gcgggatact ggataagggt attaggcatg cagaaagaac
     1561 aactttccgc tttaatggat ggcgaaacgc tggatagtga gctgcttaac gaactggctc
     1621 ataacccaga aatgcagaaa acctgggaaa gctatcactt aatccgtgac tcaatgcggg
     1681 gtgatactcc cgaggtgctc catttcgata tctcttcacg cgtgatggcc gccattgaag
     1741 aagagccagt acgtcaaccg gcgacattga tcccggaagc ccagcctgcg ccgcatcaat
     1801 ggcagaaaat gccattctgg cagaaagtac gtccgtgggc ggcacagctt acccaaatgg
     1861 gcgtagcagc atgcgtatcg cttgcagtta tcgttggcgt ccagcactat aatggacaat
     1921 ctgaaacgtc ccagcagccc gaaacgccgg tatttaatac actgccgatg atgggtaaag
     1981 ccagcccggt aagcctggga gtaccttctg aagcgaccgc aaacaatggt caacagcagc
     2041 aggtacagga gcagcgtcgt cgcattaatg caatgttgca ggattacgaa ctgcaacgcc
     2101 gactccactc tgaacagctt cagtttgagc aggcgcaaac ccagcaagcc gctgtacagg
     2161 tgccaggaat tcaaacttta ggaacgcaat cgcagtaatg aagcaacttt ggtttgccat
     2221 gtcattagtg acaggtagcc tgttattctc tgctaacgcc tcggccactc ccgcgtccgg
     2281 ggcgttatta cagcagatga acctggccag tcagtcactg aattacgagc tgtcattcat
     2341 cagcatcaat aaacagggtg ttgagtctct gcgttatcga catgcacgcc tcgataaccg
     2401 tcctcttgca caattgttgc aaatggatgg cccgcgccgg gaagtggtac agcgcggcga
     2461 tgaaatcagc tattttgaac cgggacttga accgttcacg cttaatggcg attacattgt
     2521 tgattctctg ccatcgctca tctataccga tttcaaacgc ctttctcctt actacgactt
     2581 tatctccgtc gggcgcacgc gtattgctga tcgtctttgc gaagtcattc gcgtggttgc
     2641 ccgagatggt acacgctaca gctacatcgt gtggatggac accgaatcga aattaccgat
     2701 gcgggttgat ctccttgatc gcgatggtga aacgctggaa caatttcgcg tgattgcttt
     2761 taacgtcaat caggatatca gcagcagtat gcagacgctg gcgaaggcaa atttgccgcc
     2821 gttgctttct gttcctgtag gtgaaaaagc taaattcagc tggacgccaa cctggttgcc
     2881 acagggtttt agcgaagttt ccagtagtcg acgtccgcta ccgacgatgg acaacatgcc
     2941 tatcgaatca cgtctctatt ctgacggatt attcagcttc tcggtaaacg ttaaccgcgc
     3001 tacgccatcg agcaccgatc agatgttgcg caccggacgc agaaccgtca gtacaagcgt
     3061 acgtgataac gccgaaatca ccattgtcgg tgaactgccg ccgcaaacgg cgaaacgcat
     3121 tgccgagaat attaagttcg gggcagcgca atgatcaaag agtgggctac cgtcgtctcc
     3181 tggcaaaacg ggcaggcgct ggtcagttgt gatgttaaag cttcatgcag cagctgcgct
     3241 tcacgcgccg gttgcggtag ccgcgtgttg aataaacttg gcccgcaaac cacgcatacc
     3301 attgtcgtac cctgtgatga accgttagtg ccggggcaaa aagtggaatt ggggatcgcc
     3361 gaaggcagcc tgcttagctc cgcattactg gtttatatgt cgccgctggt gggattattc
     3421 ctcatcgctt cgctatttca gctactcttt gcttctgacg tcgcagcatt atgtggtgcg
     3481 gtcctcggcg gtattggcgg gttcctgatt gcgcgcggct actcgcgtaa gtttgctgcc
     3541 cgggcagaat ggcaaccgat catcttaagc gtggcattgc cgcctggcct tgtgcgattt
     3601 gaaacatctt cggaagacgc gagccagtga tttcactggc tttgttgcat tttgcataac
     3661 aaatgcgagg acgtttccag ataccacaat ccatacggta tgaacatttc ctcgcctcaa
     3721 tgttgtagtg tagaatgcgg cgtttctatt aatacagacg ttaagctcag aacagcgact
     3781 tctaaaagcc tggttaaccg ggcattaagg cacaataatc atactttatg aagaatatac
     3841 gtaacttttc gatcatagct cacattgacc acggtaaatc gacgctgtct gaccgtatta
     3901 tccagatctg cggtggcctg tctgaccgtg aaatggaggc gcaggttctc gattccatgg
     3961 atcttgagcg tgagcgtggc attaccatca aagcgcaaag cgtgacgctg gactacaaag
     4021 cgtctgacgg cgaaacctat cagcttaact ttatcgacac cccgggccac gtagacttct
     4081 cctatgaagt ttcccgttcg ctggctgcct gtgaaggtgc attgctggtg gtcgacgccg
     4141 ggcagggcgt ggaagcgcaa accctggcaa actgctacac cgccatggaa atggatctcg
     4201 aagtggtgcc agtactgaac aagattgacc tgccggcagc cgatcctgaa cgcgtggcgg
     4261 aagaaattga agatatcgtc ggcatcgacg ccactgacgc ggtgcgctgt tcagcgaaaa
     4321 ccggcgttgg cgtgcaggac gttctcgaac gtctggtgcg cgacattccg ccgccggaag
     4381 gcgatccgga aggcccgttg caggcactaa ttatcgactc atggttcgac aactacctgg
     4441 gcgttgtttc acttatccgt attaaaaacg gcaccctgcg taagggcgac aaagtgaaag
     4501 tcatgagtac cgggcagacc tataacgccg accgtctggg catcttcacg ccgaaacagg
     4561 ttgaccgcac tgaactgaaa tgtggcgaag taggctggct ggtatgtgcg attaaagata
     4621 tccacggcgc tccagtcggc gataccttaa cgctggcgcg taatccggca gaaaaggcgc
     4681 tgcctggctt taagaaagtc aaaccgcagg tatacgccgg tctgttcccg gtaagttccg
     4741 acgactatga agccttccgt gacgcgctgg gtaaactcag cctgaatgat gcctcactgt
     4801 tctatgagcc ggaaagctcc agcgcgctgg gctttggttt ccgctgcggc ttccttggcc
     4861 tgctgcacat ggagatcatc caggaacgtc tggaacgtga atacgatctg gatctgatca
     4921 ccactgcgcc gaccgtagtg tatgaagttg aaaccacgtc aagggaagtt atctacgtcg
     4981 acagcccatc caagctgcct gcggtaaata acatttacga actgcgcgag ccgattgcag
     5041 agtgtcacat gctgctgccg caggcatatc tcggcaacgt tattacgctg tgcgtagaaa
     5101 aacgcggcgt gcagaccaat atggtttacc acggtaatca ggtggcgctg acgtacgaga
     5161 tcccgatggc ggaagtggtg ctcgacttct tcgatcgcct gaaatctacc tcgcgtggtt
     5221 atgcgtctct ggattacaac ttcaaacgct tccaggcgtc cgacatggta cgtgtagacg
     5281 tattaatcaa cggtgaacgt gttgatgcgt tggcgctgat cacccaccgt gataattcgc
     5341 aaaaccgcgg tcgcgagttg gtggagaaga tgaaagatct gatcccacgc cagcagtttg
     5401 atatcgccat tcaggcagcg attggtacgc acattattgc gcgatccacc gtgaaacagc
     5461 tgcgtaaaaa cgtactggct aaatgttatg gcggcgatat cagccgtaag aaaaagctgc
     5521 tgcagaagca gaaagaaggt aagaaacgca tgaagcagat cggtaacgtc gagctgccgc
     5581 aggaagcgtt cctcgccatt ctgcacgtcg gcaaagacaa caaataaccc ttaggagttg
     5641 gcatggcgaa tatgtttgcc ctgattctgg tgattgccac actggtgacg ggcattttat
     5701 ggtgcgtgga taaattcttt ttcgtaccta aacggcggga acgtcaggca gcggcgcagg
     5761 cggctgccgg tgactcactg gataaagcaa ccctgaaaaa ggttgcgccg aagcctggct
     5821 ggctggaaac cggtgcttct gtttttccgg tgctggctat cgtattgatt gtacgttcgt
     5881 ttatttatga accgttccag atcccgtcag gttcgatgat gccgactctg ttaatcggtg
     5941 attttattct ggtagagaag tttgcttatg gcattaaaga tcctatctac cagaaaacgc
     6001 tgatcgaaac cggtcatccg aaacgcggcg atatcgtggt ctttaaatat ccggaagatc
     6061 caaagcttga ttacatcaag cgcgcggtgg gtttaccggg cgataaagtc acttacgatc
     6121 cggtctcaaa agagctgacg attcaaccgg gattcagttc cggccaggcg tgtgaaaacg
     6181 cgctaccggt cacctactcc aacgtggaac cgagcgattt cgttcagacc ttctcacgcc
     6241 gtaatggtgg ggaagcgacc agcggattct ttgaagtgcc gaaaaacgaa accaaagaaa
     6301 atggaattcg tctttccgag cgtaaagaga cactgggtga tgtgacgcac cgaattctga
     6361 cagtgccgat tgcgcaggac caggtgggga tgtattacca gcagccaggg caacaactgg
     6421 caacctggat tgttccgccg ggacaatact tcatgatggg cgacaaccgc gacaacagcg
     6481 cggacagccg ttactggggt tttgtgcctg aagcgaatct ggtcggtcgg gcaacggcta
     6541 tctggatgag tttcgataag caagaaggcg aatggccgac aggtgtgcgc ttaagtcgca
     6601 ttggcggcat ccattaatag cccatcttcg ttcacgttgt cgccgttatg gcgacaacgt
     6661 gaattattta tgagataaat ctcccgtggc taacgacatc ccccgtcgtt gtgtatagaa
     6721 tattcccccg aagtttaagg ttggcacctc caggttgcca cggcacacga aacagcgttg
     6781 gtccccatat accggtaaac tgaaactgca gcgaagcagt tagcagagcc atgtatatca
     6841 ggtctgtttc gtgtgctgaa ttgttgacgc atttatttat tggtatcgca tgaaccccat
     6901 cgtaattaat cggcttcaac ggaagctggg ctacactttt aatcatcagg aactgttgca
     6961 gcaggcatta actcatcgta gtgccagcag caaacataac gagcgtttag aatttttagg
     7021 cgactctatt ctgagctacg ttatcgccaa tgcgctttat caccgtttcc ctcgtgtgga
     7081 tgaaggcgat atgagccgga tgcgcgccac gctggtccgt ggcaatacgc tggcggaact
     7141 ggcgcgcgaa tttgagttag gcgagtgctt acgtttaggg ccaggtgaac ttaaaagcgg
     7201 tggatttcgt cgtgagtcaa ttctcgccga taccgtcgaa gcattaattg gtggcgtatt
     7261 cctcgacagt gatattcaaa ccgtcgagaa attaatcctc aactggtatc aaactcgttt
     7321 ggacgaaatt agcccaggcg ataaacaaaa agatccgaaa acgcgcttgc aagaatattt
     7381 gcagggtcgc catctgccgc tgccgactta tctggtagtc caggtacgtg gcgaagcgca
     7441 cgatcaggaa tttactatcc actgccaggt cagcggcctg agtgaaccgg tggttggcac
     7501 aggttcaagc cgtcgtaagg ctgagcaggc tgccgccgaa caggcgttga aaaaactgga
     7561 gctggaatga gcatcgataa aagttactgc ggatttattg ccatcgtcgg acgtccgaac
     7621 gttggcaaat ccacattgtt gaacaaactg ctggggcaga agatctccat cacctcccgc
     7681 aaagcgcaaa caactcgtca ccgcattgtg gggatccata ctgaaggcgc gtatcaggcg
     7741 atctacgttg atacccctgg cctgcatatg gaagaaaaac gcgctattaa ccgcctgatg
     7801 aacaaagcgg cgagcagctc tattggcgac gttgagctgg tgatttttgt cgttgaaggc
     7861 acccgctgga cgccggacga cgaaatggtg ctcaacaaac tgcgcgatgg caaagcgccg
     7921 gtgatcctcg cggtgaacaa agtggataac gtgcaggaaa aagccgatct gctgccgcac
     7981 ttacagttcc tggcaagtca gatgaacttc ctcgatatcg tgccgatctc tgctgaaacc
     8041 gggctgaatg tcgacactat cgcagcaatc gtgcgtaagc atctgcctga agcgacccat
     8101 cacttcccgg aagattacat caccgatcgc tcacagcgtt ttatggcgtc tgaaatcatc
     8161 cgcgaaaaac tgatgcgttt cctcggcgct gaactgccgt actccgtgac cgtggagatc
     8221 gaacgtttcg tctctaacga acgcggtggt tatgacatca atggtttgat tctcgttgag
     8281 cgtgaagggc agaagaagat ggttattggc aacaaagggg ccaagatcaa aaccatcggg
     8341 attgaagcgc gtaaagacat gcaggaaatg ttcgaagcgc ctgtccacct tgaactgtgg
     8401 gtaaaagtga aatccggttg ggccgacgac gaacgcgcac tgcgcagtct cggttacgtt
     8461 gacgatcttt aagagtcact ccgatggaag gctggcagcg cgcatttgtc ctgcatagtc
     8521 gcccgtggag cgaaaccagc ctgatgctgg acgtcttcac ggaggaatcg ggtcgcgtgc
     8581 gtctggttgc caaaggcgca cgctctaaac gctctactct gaaaggtgca ttacagcctt
     8641 tcacccctct cttgctacgt ttcggcgggc gtggcgaagt caaaacgctg cgcagtgctg
     8701 aagctgtctc gctggcgctg ccattaagcg gtatcacgct ttacagcggt ctgtacatca
     8761 acgaacttct ctcccgcgta ctggaatacg agacgcgctt ctctgaactc tttttcgatt
     8821 atttgcactg cattcagtct cttgcaggtg ccactggtac gccagaaccc gcgctgcgcc
     8881 gctttgaact ggcactgctc gggcatctgg gctatggcgt caattttacc tattgcgcgg
     8941 gtagcggcga gccggtagat gacaccatga cgtatcgtta tcgcgaagaa aaagggttta
     9001 tcgcaagcgt cgttatcgac aataaaacgt tcaccggaag gcagttaaaa gcgttaaacg
     9061 cgcgggaatt tcctgacgca gacacactac gcgccgcgaa acgctttacc cgcatggcgc
     9121 ttaagccgta tcttggcggt aaaccattaa agagcaggga actgttccgg cagtttatgc
     9181 ctaagcgaac ggtgaaaaca cattatgaat gatgaggatt gtcatggctg aattactgtt
     9241 aggcgtcaac attgaccata ttgcaacgct gcgtaacgca cgcggtactg cttacccgga
     9301 tccggtgcag gcggcgttta ttgccgagca ggcgggagcg gacggcatta ccgtgcattt
     9361 acgtgaagat cgccgccaca ttactgaccg cgatgtgcgc atcctgcggc agacgctgga
     9421 tacccgaatg aatctggaga tggcagtgac cgaagagatg ctggcgatcg ccgttgagac
     9481 gaagccacat ttttgctgcc tggtaccgga aaagcgtcag gaagtaacaa cagaaggcgg
     9541 cctggacgtt gcagggcagc gtgaaaaaat gcgcgatgcc tgcaaacgtc tgacagatgc
     9601 cgggattcag gtttctctct ttatcgacgc cgatgaagag cagatcaaag ctgcggcaga
     9661 ggttggcgca ccgtttatcg agatccacac cggttgctat gctgatgcca aaactgacgc
     9721 cgaacaggcg caagagctgg tgcgtatcgc caaagccgcg acctttgccg ctagtctcgg
     9781 tctgaaagtt aacgccggac acggtctgac ctatcacaac gtgaaagcca ttgccgccat
     9841 ccctgagatg catgaactga atatcggtca tgccattatt ggccgtgcag tgatgaccgg
     9901 actgaaagat gcggtggcag aaatgaagcg tctgatgctg gaagcgcgtg gctaatggca
     9961 atattaggtt taggcacgga tatcgtagag atcgctcgca tagaagcagt gatcgcccga
    10021 tccggtgagc gcctggcacg ccgcgtatta agcgataacg aatgggcaat ctggaaaacg
    10081 caccaccagc cggtgcgttt tctggcgaag cgttttgctg tgaaagaagc cgcagcaaaa
    10141 gcgtttggca ccgggatccg caatggtctg gcgtttaatc aatttgaagt attcaatgat
    10201 gagctcggca aaccacggct acggctatgg ggtgaggcat taaaactggc ggaaaagctc
    10261 ggcgttgtaa atatgcatgt aacgctggca gatgaacgcc actatgcttg tgccacggta
    10321 attattgaaa gttaaaataa taccgttctc tttaaaaagt aaaacccccg aactggtaag
    10381 gaacgggggt tttacttttt aactttaatt ttgtgcagca tgcaccctca acaacagcga
    10441 ttatggatca gtgtacttat cttttacaag caacttgcaa tctttagcat aaaaactcga
    10501 gcctttacga agaaagcaat attgatggaa agattaacgt gaccgccaat tcgtaagtac
    10561 attaaaattg gcttcgttat tgaagatttt gctgtgcttt acaccatgcc acagaattcc
    10621 cccattgaaa cgagtggtgt cgtcaaagct ctggtgtgga gtgcagcatg caccctcaat
    10681 aactcgcacg ttcagttttg gggagatgta agggctaatc tgaacggctg cattccttgt
    10741 ttaaggaaaa acgaatgact gattgccgat acctgattaa acgggtcatc aaaatcatca
    10801 ttgctgtttt acagctgatc cttctgttct tataacacaa gtaaacgtac ttaaggtgcg
    10861 tccggtgaac caatcggacg cgcctttaat aactataaat aagtgtcttg gcagatacta
    10921 tataaattaa cttagtgaat gatta
//
LOCUS       DADMHC010000131        10904 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.132, whole genome shotgun sequence.
ACCESSION   DADMHC010000131 DADMHC010000000
VERSION     DADMHC010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10904)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10904)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10904
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.132"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(97..337)
                     /locus_tag="JNZ57_002851"
                     /pseudo
     CDS             complement(97..337)
                     /locus_tag="JNZ57_002851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309113.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(564..1385)
                     /locus_tag="JNZ57_002852"
     CDS             complement(564..1385)
                     /locus_tag="JNZ57_002852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitermination protein"
                     /protein_id="HAY8829005.1"
                     /translation="MKLEDLPKYYSPKSPSLTDASASTSKDALSITDVMAAQGMTQNR
                     AEMGFSAFLGKMGISMNDRARATELLADYALSRCDRVAALRKLPAEIKPVVMRIMASY
                     AFEDYARSAASKKQCPCCHGKKFIESEVFTNKIQYPDGKPPVWAKCTKGVYPSYWEEW
                     KKVREVVKVACPECGGKGEVSTACKDCRGRGVAIHREESVKRGMPVIRDCQRCGGRGC
                     ERLPSTEAFNAICKVTSAITLDTWKKSVKRFYDTLVVRFDIEEAWAERQLKRVTR"
     gene            complement(1382..1756)
                     /locus_tag="JNZ57_002853"
     CDS             complement(1382..1756)
                     /locus_tag="JNZ57_002853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001459679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HAY8829006.1"
                     /translation="MLIDLVLPYPPTVNTYWRRRGSTYFISEEGKRYRRAVALIVRQQ
                     RLKLSLSGRLAIKVIAEPPDKRRRDLDNILKAPLDALTHAGVLMDDEQFDEINIVRGQ
                     PVSGGRMGVKIYPIMHEEQVKK"
     gene            complement(1769..2758)
                     /locus_tag="JNZ57_002854"
                     /pseudo
     CDS             complement(1769..2758)
                     /locus_tag="JNZ57_002854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001202276.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF968 domain-containing protein"
     gene            complement(2810..3067)
                     /locus_tag="JNZ57_002855"
     CDS             complement(2810..3067)
                     /locus_tag="JNZ57_002855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009453440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829007.1"
                     /translation="MNNRTITVSPEQLRRQAQEMLRCAEQMEKTSVAKDTLRKQLTPA
                     LRDLLQAKHRTQKAVDELVDCVAELEGQVSQFETLVKEFTA"
     gene            complement(3064..4465)
                     /locus_tag="JNZ57_002856"
                     /pseudo
     CDS             complement(3064..4465)
                     /locus_tag="JNZ57_002856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000203847.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
     gene            complement(4462..5340)
                     /locus_tag="JNZ57_002857"
     CDS             complement(4462..5340)
                     /locus_tag="JNZ57_002857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706613.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HAY8829008.1"
                     /translation="MMTIDQREKQTRLQARMDELRAEIAFAQKGEKPWPYRSCLMREG
                     RGYCEKHGKYRTHILVWSDRNGEDREKISCCPDCLIAEASYLTMELSSLKAEELTDNA
                     GIALRFRDCEFDNYLEVNPDAARNLAACRRYAENWPDMLENGTSLVMTGSCGTGKNHL
                     AVSMAKHIIRNYLASVEITDVMRLTRAVKNCWRNDSEKTADDVIEHYASLDLLIVDEV
                     GVQFGSAAEMAILQEIINARYEGILPTILISNLSPEELWAFISPRIADRITDGGRNWL
                     SFNWPSYRSRIGGVAA"
     gene            complement(5351..6331)
                     /locus_tag="JNZ57_002858"
     CDS             complement(5351..6331)
                     /locus_tag="JNZ57_002858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001551255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HAY8829009.1"
                     /translation="MSRYAPTPEVMAIGQINISGNVTPANWWKYIRLPSGRPDATAIA
                     LLSEIVYWYRPTEVRDEHTGALLGYRKRFQGDKLQRSYQAFAEQFGFGKRETADALKR
                     LRDAGFITLDLRTVEMLDGVKCSNILFVGINPQAIAAITTPSSVSPESNSNNAISDTA
                     ITLKRNTPRRHNGTGDTPNVDTNTEITTETKNTIDASADASAPARSARQEYSPEFEQA
                     WQEYPKRAGGNSKSAAFKAWKARIREGIKPETMLDGVKRYAAWVRATGNTGTQFVKQA
                     ATFFGPDRHFEDYWQQPAAHGGGRQRQVDVLAGLGAMSDKFGKSSNKLTF"
     gene            complement(6328..6627)
                     /locus_tag="JNZ57_002859"
     CDS             complement(6328..6627)
                     /locus_tag="JNZ57_002859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000995578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY8829010.1"
                     /translation="MNCFQFVCGCAFDNPIQRLIMLRVLMSGSSDGEGERVIDHQVLA
                     DFCCCSKQAIFRETLALERAGYLHIRKIATLTIDAKARLQPARGYTILMPRKEVV"
     gene            complement(6624..6848)
                     /locus_tag="JNZ57_002860"
     CDS             complement(6624..6848)
                     /locus_tag="JNZ57_002860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000621226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829011.1"
                     /translation="MIRHIVNSLYHRYNRCPRVGQWFATSNGHVLRVCLVNAESQKVV
                     CELQGRSYTISYPLAVFLSGKMFKRLGGVA"
     gene            complement(6845..7039)
                     /locus_tag="JNZ57_002861"
     CDS             complement(6845..7039)
                     /locus_tag="JNZ57_002861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000626789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829012.1"
                     /translation="MISYEIIISTTEYRNDVSVRTDVSVWHRRYKSRKTAELKAAEMC
                     ETISMKGSPVKYVTTVEVRP"
     gene            complement(7036..7884)
                     /locus_tag="JNZ57_002862"
     CDS             complement(7036..7884)
                     /locus_tag="JNZ57_002862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000587265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HAY8829013.1"
                     /translation="MIISRPNIDSAISGRYTVSAPYKAGAGIGVLKFAHAHNRASAVF
                     LRTFPHIQIMVGRAGASKDAPGSCATGYANPVRLTTSVIGVPCGEFSKFAHEDVTMAT
                     TPTQTHPKIDVIHGKAVTSSLAVAEYFCKQHKNVIQKIQTLECSVEFTELNFQPSDYT
                     DCTGRKLPCYQITRDGFAFLAMGFTGKRAARFKEAYINAFNQMEKNLSGADAVDMSAV
                     ARNARGVYLHLREIHQIWTSQLYPMLKAVESPLASKLYDRVGDAVFGAALVDSRLNGS
                     DKEVRP"
     gene            complement(7993..8700)
                     /locus_tag="JNZ57_002863"
     CDS             complement(7993..8700)
                     /locus_tag="JNZ57_002863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001435006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HAY8829014.1"
                     /translation="MNTAIFNGKASMTSVEIAELVGSRPDSVKRTIETLAKKGIIQFP
                     QAVEIENKQSLGPRRFSSAYVFEGERGKRDSIIVVAQLCPEFTARLVDRWRELEEQIR
                     KPMSEIEMVAAMALEAVRQQKRITQVEEKVSHVAETVEQIKKGTIREGYAGYRQLKAK
                     TGLSDDKCRNLVNAYQIPTDTHEFMTPDRLLPRRAIVAVEPFMAAFYRVMEEAEPRGT
                     RWYHPKMGLFQVIGWQR"
     gene            9036..9692
                     /locus_tag="JNZ57_002864"
     CDS             9036..9692
                     /locus_tag="JNZ57_002864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015967619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY8829015.1"
                     /translation="MKSLGERLINARQKAGLTQDALAKKAGITRVAISKAEQGLTKSF
                     NGDTLFKVAAALRCSPQWLQNGDEKDKHWENNVKSCPQRDTAHSYPVINWVQAGLFAT
                     SGDDYNMYDQDNWRHSVKYAGERGFWLEVHGDSMTSPVGITFPEGMSILVNPDKEVFS
                     GCYVIARKKSTNEATFKKYISDMGKAFLKPLNPQYPIIEMDNDCEIVGVVVDARWDIF
                     "
     gene            9795..10298
                     /locus_tag="JNZ57_002865"
     CDS             9795..10298
                     /locus_tag="JNZ57_002865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001551258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY8829016.1"
                     /translation="MINKATTLDCLEELKNLGSLITLIAKATPDATLSSDIESCAGLA
                     WDMTNSISRKLSSAMLLQNKNSAINNRLRTQREACGLTTAELARLLDLDEEIIIQWES
                     GEYEPTISMLIPLANILGCDPMWLLTGEVTPPEQPKSEEQQHHDASQQVCPLSREALL
                     RKNQYQW"
     gene            10586..10792
                     /locus_tag="JNZ57_002866"
     CDS             10586..10792
                     /locus_tag="JNZ57_002866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000141093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829017.1"
                     /translation="MTETTSQQDNYEGICLEPDSFAVNVYHLLHATQVLHMSSNHETK
                     TLGSEILSFACEYTKAAAEKELAQ"
BASE COUNT         2744 a         2922 c         2503 g         2735 t
ORIGIN      
        1 cctgtctctg ataggctcat tctgcttttg cgcaaagcag tgggcctgag gtttgcttgt
       61 gaacccaacg catgagcaga tggctggtgg gtgcccctaa cacccaccag ccgcccattt
      121 accacaaata aaaaagcctt cactgcggaa ggcgtctgta acaaccgaac tgatagtctg
      181 ccagacccgc cataaccagc tgggtcagta ttaactggca gcgttcgcgt gaaaggtaag
      241 tattctgcgc tatctccccg actgtcgccg gttcggtaac gcttaattca ttaaacacca
      301 ctctggcggt ttctgtcata tcctgctgtt ttagcatgtc tttttccctt ttccggttaa
      361 cgtgacacac caataactct tgtcgaaaaa gccagcaagc tgaaagacag gtattcaccg
      421 ccaccagcgc gtttactgta ctgacgcgat ttcagtcata aaaaacccgc caggcggcgg
      481 ggtgtaaaaa atcttctaac gtcaggcata aaacgcccat cattagagca aatttaccac
      541 agattcggga aaaatcaaca acactatcgc gttaccctct ttaactgccg ctccgcccat
      601 gcctcttcaa tgtcaaaccg aaccaccaac gtatcgtaaa agcgtttcac tgattttttc
      661 cacgtatcaa gcgtgatagc actcgtcact ttgcatatgg cattaaatgc ctccgttgat
      721 ggtagtcttt cacagccacg accaccacaa cgctggcagt ctctgataac aggcatacca
      781 cgttttaccg actcttcacg atgaatggcg acaccacgcc cacggcaatc cttacaggcg
      841 gtggaaacct caccctttcc gccacactcc ggacaggcaa cttttaccac ctccctgact
      901 tttttccatt cttcccagta agacggatac acgccttttg tgcactttgc ccacactggt
      961 ggcttaccat ccggatactg gatcttgttt gtaaaaacct cgctttcaat aaattttttt
     1021 ccgtgacagc aggggcactg ttttttgctc gccgcgctac gggcataatc ttcaaacgca
     1081 tacgaagcca taatgcgcat cactaccggt tttatttctg ccggaagttt tctcaacgcc
     1141 gctacacgat cgcaccgact gagtgcataa tctgccagta attctgttgc ccgcgccctg
     1201 tcattcatac tgatgcccat tttccccagg aacgcagaaa accccatctc agcccgattc
     1261 tgtgtcatgc cctgcgcggc catcacatca gtgatactca gcgcatcttt tgacgttgag
     1321 gccgatgcat cggtcaggct aggggatttt ggggagtagt atttcggtaa atcttccagt
     1381 ttcatttttt gacctgctct tcatgcatta tggggtaaat cttcaccccc atacgtccac
     1441 cagatactgg ctgaccacga acgatattga tttcatcaaa ctgctcatcg tccattaaca
     1501 ctcccgcatg cgtcagcgca tccagcggtg ctttcaggat attgtccagg tcgcgacgac
     1561 gcttatccgg tggctctgca atcaccttta tcgccagcct tccggacagg cttaatttca
     1621 gccgctgctg gcgaacaata agcgccacag cccggcgata acgctttccc tcctccgaga
     1681 taaaatatgt gctgccacgg cgtcgccagt aagtgttcac cgtcggcggg taaggtaaaa
     1741 ccaaatctat gagcatcagt cacctctttt acccaagcac gccagttgca aaggcgtgat
     1801 caagaaaacg aaaaattaaa tcaacctgag aaccatgctt ttcttcgaac gccagaggat
     1861 ccgcatgaag ctcgttgtga tgctcccgac acagcggtag cgtgaaaata tcgtgagatt
     1921 ttgtccccat tcagccctga ccatgaccaa tcaggtgatg gggatcgtcg gctggcttac
     1981 cacaacacgc acacggctgt gtcttcaccc agcgtgtgta tttctcgtta acccagcggc
     2041 gacgttttgg gcgtaacata aaagactccg gcgactccgg atccactttc agcgccagca
     2101 cctttttcgc cttatcctgg atgatgctgg tggcaggaac cgaaggcaca aggtcacttt
     2161 cccgggtgac agacggcaca acaggcttcg gtaatctcag tgccttacgg gctgcacttt
     2221 ccggtaaggc atccgccagg tcattacgaa tcagccacca gcacagttcc ggcattgtca
     2281 caacgtgact gtcatcaaaa ccgagatccc gacgcacaac agacaacacc cagcgggcac
     2341 agttatccgt tgccattgat tccagccgtt ccgtgaactg gtcacggaga agattgtcac
     2401 agtgccagca cagacggatt gcgcctggcg cgtgccgcat tgtggtcatg ttctcgctgt
     2461 gccagtcgga atgaggccac tgacagccct tttcacgaag taaccagctc tcaaggcatt
     2521 ccacgccacc agcacgacgg atcaccgcct catggcggaa cacggcccga acggcaggat
     2581 catccgccag cggttgtgat gctgccggaa cggcaccgct ggcgaaagat gaataacgtt
     2641 ccggctcagg ctccagcagg acacgcccct gcataaacag gggcatcagc tctgaaccgg
     2701 gcctgaacaa tacaatcccc attcgcgggg caatttcagg agtcaacaat gctctcacgg
     2761 tcacctcagc gaacgatatt gcatgaacgc aggagaaaaa attcagccat cacgcagtaa
     2821 actccttcac cagcgtttca aactggctta cctggccttc cagttccgcc acgcaatcca
     2881 ccagctcatc caccgccttt tgtgtacggt gttttgcctg cagcagatca cgaagcgccg
     2941 gagtaagctg cttgcggagc gtatcttttg ccacgctcgt tttttccatc tgttcagcac
     3001 aacgaagcat ctcctgcgcc tgccgacgaa gttgttccgg tgaaacagtg attgttctgt
     3061 tgttcaaaat aaacgctccg ttttactgcc cgacatgcgg ttattgctgt atctgcgcgg
     3121 attgcccggc gtcatgggtg tggaaagaac ccgggcactc tcctggtcca caggcagaaa
     3181 atgtccgtta tgaaaacgcc ggtaaatggt cccgagcgtg ccattacgct gtttcgtgat
     3241 gttgatttct gctatgcctc tggcctgagt ttccgggttg tatacctcat ccctgtaaag
     3301 catcagaatg atgtcggcat ccgcctcgat ttccccggag tttttcaggt ccgagttcat
     3361 tgggcgttta ttgggtctgg attccacgcc gcgggagagc tggctcagag caatcagcgg
     3421 aaaaccgccg gattttgcca ggcttttaag tccctttgag atttccccca ccgcaaggtc
     3481 gtgacgcccc gtactgcggg ttttaatcag gccgaggtaa tcgaccacca ccagcgccgt
     3541 ttccgggtgt ttcatccggt ggtgcttcgt ggttgcacat atctcatcaa tgggtcaggt
     3601 ttgcctggtc caccatccag atattacgcc ccgtcattcg tcccacgccc tgcgagaaac
     3661 gcgcccagtc ttcatcttca aaacgggcaa cagacttaag acgggatacc ggcattccac
     3721 cggcagcaga caccatacgt tcaccaatct ggatgttcgc catctccatg gtgaacagaa
     3781 gcacgccatg cccctgctca gtcaccttgt cgatgatgtc cagcgcaagt tcggttttcc
     3841 ccatcgaagg acgggcggca atgaatacca ggtctccggg ctccataccg cccgtttttg
     3901 cgtccagttc atcaataccg gtcatcagcg ccctggattt ctccagtccc tgattgcggc
     3961 attcaacacg gtcgaccact tccagaagga catcatcaat gtgaaccggc tgaatgacgc
     4021 cctttccggt cgacagtgag gccatcatgt tctgcacatc cttcagggca tcctcggctg
     4081 cttcacaggt atacgcatca cgtaaattct gtaatgcttc agtcagtgtt ttttctgcat
     4141 cgcgcagtgc ggcattgcgc cgcaacgctg cgacatagtg ctccagtgaa gacttcaccc
     4201 aggttttgcg tccggtgtcg gtaatcaccg gggcaagttc cggcatctca ttgcacagca
     4261 gtacggggtc aatgacgccg gatatgcgag cctgtctgca aatccccgcg taaatatccc
     4321 ggtactgacg cacaaaaaat acatccgccg gaagtgtggc cagaatatcc atcacttccg
     4381 gatcggcccc acgcagaaaa aacgcaccga tgacagcgcc ttccaggtca tcgttacgcc
     4441 atgccggggt gttctggctg gtcatgcggc aacacctccg atacgagaac ggtagctggg
     4501 ccagttaaac gacaaccagt tgcgcccgcc atcggtgatc ctgtcggcaa tccggggact
     4561 gatgaacgcc cacaattctt ccggtgaaag attgctgatc aagatagttg gcaaaatacc
     4621 ctcataccgg gcattgataa tttcctgcaa aatggccatt tcagccgcac tgccaaactg
     4681 aacgccgact tcgtcgacaa tcagcaaatc cagtgacgca taatgctcaa tgacgtcatc
     4741 cgctgttttt tcactgtcat tccgccagca gtttttcaca gcccgggtaa ggcgcatcac
     4801 gtcggtgatc tccacactgg ccagatagtt acggatgatg tgttttgcca ttgataccgc
     4861 cagatgattt ttcccggtac cgcaactgcc ggtcataaca agactggtac cgttctccag
     4921 catatctggc cagttctccg catagcggcg acaggccgca agatttctgg ctgcgtcagg
     4981 attaacctcc agataattat caaactcgca gtcccgaaaa cgcagagcaa ttccggcgtt
     5041 atcagtcagt tcttccgcct tgagggacga cagttccatg gtcaaataac tggcctcagc
     5101 gatcaagcag tcagggcagc atgaaatttt ttctctgtcc tcgccattac gatcgctcca
     5161 caccagtata tgcgtacgat atttaccgtg tttttcgcaa tatccgcgac cttcacgcat
     5221 caggcaggaa cgataaggcc atggcttttc gcccttctga gcaaatgcaa tctctgcccg
     5281 taactcatcc attcgcgcct gtagtcttgt ttgtttctca cgttggtcaa tcgtcatcat
     5341 cgctgtcacc tcagaatgtc aatttgttac tggatttacc gaatttgtca gacatggctc
     5401 ccaggccagc caggacatca acctgtcgct gtcgcccacc tccgtgagcg gctggctgtt
     5461 gccagtaatc ttcgaagtga cgatcgggtc caaagaacgt cgcagcctgc ttcacgaact
     5521 gtgtgccggt atttcctgta gcacgtaccc aggcggcata ccgcttcacg ccatcaagca
     5581 tggtctccgg ttttattcct tccctgatac gggctttcca ggctttgaag gctgctgact
     5641 tggaattgcc accagcacgt ttgggatatt cctgccaggc ctgttcaaat tccggtgaat
     5701 attcctgtcg ggcagaacgc gctggcgcag acgcgtcagc ggatgcatca atagtgtttt
     5761 tagtctccgt tgtaatctct gtatttgtat caacattcgg cgtatcccct gttccgttat
     5821 gacgtcgggg ggtgttccgt tttaacgtaa tagctgtatc gctgattgca ttattgctgt
     5881 tactttctgg cgaaacagaa gaaggtgtgg tgatggccgc aattgcctgt gggttgatcc
     5941 cgacaaacaa aatattgctg catttcaccc catcgagcat ttccaccgtg cgtaaatcca
     6001 gagtaataaa ccctgcatcg cgcagacgct tcagcgcatc tgcggtttcc cttttcccga
     6061 aaccaaactg ctcagcaaac gcctggtagc ttctttgcag tttgtcgccc tgaaaacgct
     6121 tgcgatatcc cagcaacgct ccggtgtgct catccctgac ctctgtcggg cggtaccagt
     6181 aaacgatctc tgaaagcaga gcgatagccg tcgcatccgg acgcccactg ggtagtcgaa
     6241 tatatttcca ccagttcgca ggtgtaacat tgccggaaat attaatttga ccaatagcca
     6301 taacttccgg tgtgggggcg taacggctca tacaacctcc ttccgcggca tgagaattgt
     6361 gtagccacgc gcaggttgta gtctggcttt tgcatcaata gtaagcgttg caatttttcg
     6421 gatatgaaga taaccagctc tttccagtgc cagggtttcc ctgaatatcg cttgcttaga
     6481 acaacagcag aaatcagcaa gcacctgatg atcaataact ctctcgcctt caccgtctga
     6541 agaacccgac atcaaaacac gcaacataat caggcgctga atcgggttat cgaaagcaca
     6601 tccgcacaca aactgaaaac agttcacgcc acacctccca gacgcttaaa catttttcca
     6661 gacagaaata ccgccagagg gtaactgatg gtgtagctac gcccctgtag ttcgcacacg
     6721 actttctggc tttcagcgtt gactaggcaa acccgcagaa cgtgaccgtt gctggtggcg
     6781 aaccactgcc ccacacgggg gcaacggttg tatcggtgat acagggaatt aacgatgtgg
     6841 cggatcatgg acgcacctcc accgtagtta cgtatttaac cgggctacct ttcattgaga
     6901 tggtttcaca catctctgcc gctttcagtt ccgctgtttt tctggattta tagcgacggt
     6961 gccagacaga tacatccgtg cgaactgata catcgtttct gtattccgta gtggagatga
     7021 tgatttcgta actaatcatg ggcgaacctc cttgtcagaa ccattcagcc tggaatcaac
     7081 aagtgcagcg ccaaaaacag catcaccaac acggtcgtac agtttgctag ccagcggaga
     7141 ttcaacggcc ttaagcattg gataaagctg gcttgtccag atttgatgga tttcacgcaa
     7201 atgcaggtat acgcctctgg cgtttcgtgc gacagctgac atatcaaccg cgtcagcacc
     7261 agataaattc ttctccatct ggttaaaggc gttgatgtat gcctctttga accgggctgc
     7321 acgtttgcca gtaaagccca tagcaaggaa cgcgaagcca tcgcgggtga tttgatagca
     7381 aggtagtttg cggcctgtgc aatcggtgta atcactgggc tgaaaattca gctcagtgaa
     7441 ttcaacagag cactcaagcg tctggatttt ttgaataacg tttttgtgct gcttgcagaa
     7501 atattcggca acggccaaag aagaggtaac agccttccca tggataacat caattttagg
     7561 gtgagtttgg gtaggggtgg ttgccatagt gacatcctca tgtgcgaatt ttgaaaactc
     7621 accacatggg acgccaatca cagaggtggt gagacgtaca gggttggcgt aaccggtcgc
     7681 acatgacccc ggcgcatctt tcgatgcccc tgcacgcccc accataattt ggatgtgagg
     7741 aaacgtgcgc aaaaaaaccg ctgaagcgcg gttatgcgca tgtgcgaatt tcaggacgcc
     7801 aatcccggca cccgctttat aaggtgcgga gacagtgtaa cgtcccgaaa ttgcagaatc
     7861 aatatttggt cttgaaatga tcatatagct gctgatatct ttagaactgt tcttggatgt
     7921 ttcggagccg ttttatgcga aacagctccc cgttattgat gttgagtgag ccgggttact
     7981 cccggctttt tttcaccgct gccaaccaat aacctgaaat aaccccattt tcgggtgata
     8041 ccagcgagtc cctcgcggtt ctgcttcctc cataacccga taaaaagcag ccataaacgg
     8101 ttccacagca acaattgcgc gacgtggcaa caatctgtcc ggcgtcatga actcatgggt
     8161 gtctgtagga atttgatagg cgttcaccag attgcggcat ttatcatctg acaaaccggt
     8221 ttttgctttc agttggcgat atccggcata gccctcacga atagtgccct ttttaatttg
     8281 ctcgactgtt tcagcaacgt ggctgacttt ttcttccacc tgagtgatcc gtttctgttg
     8341 gcgaacggct tcaagagcca tcgcggcaac catttcgatt tcgctcattg gcttacggat
     8401 ctgttcttcc agttcgcgcc agcgatctac caggcgagct gtgaattcag gacagagctg
     8461 tgcgacgaca atgatgctgt cgcgcttacc tcgttcacct tcgaatacat acgcgctaga
     8521 aaatcggcga ggcccaagtg attgtttatt ctcaatttcc acagcctgtg gaaattggat
     8581 gattcccttt ttagccagtg tttcaatagt tctcttaaca ctatctggtc ggcttcccac
     8641 cagctctgcg atctcaacgc tggtcatgga tgctttgccg ttaaaaattg cggtgttcat
     8701 tgttggtctc ctgtgggctt gtcatcttct gtattcgcta gccttgggtg tgtatatgga
     8761 atgctcggat ccagatgaca aagaatggca acatcctccg gaacacctcg cgttttccac
     8821 tttccaacac cttgactgcc acgaggcctt cctttctttg ggaacctgcg accaatagcg
     8881 gcattggttt taaattgaat ttttaatatt tcataaaggg tcattcttta gtctcacacc
     8941 agatactttg ttattcaacg atgttaaccg cgggattcca aagtatcaag aaattctgtt
     9001 actttcgtat caacagccat gagaggagaa gaaaaatgaa gtctttaggt gaacgtctca
     9061 tcaacgcacg gcaaaaagct gggttaacac aagatgcgtt ggctaaaaaa gctgggatca
     9121 ccagagttgc aatcagtaaa gccgagcaag gccttacaaa aagtttcaac ggtgacaccc
     9181 tttttaaagt tgcagctgca ctgcggtgtt caccgcagtg gcttcagaac ggagatgaaa
     9241 aagataagca ttgggaaaat aatgttaaga gctgcccaca gagagacaca gcacactctt
     9301 accctgtaat taactgggtt caggcaggat tattcgcaac ttctggtgat gactacaaca
     9361 tgtatgatca ggataattgg aggcattctg taaaatacgc tggtgagagg gggttctggc
     9421 tggaagtgca cggagactca atgacttcgc ccgtaggaat aacatttcct gaaggaatgt
     9481 cgatccttgt caacccagat aaagaagttt tttcagggtg ttacgtcatc gccagaaaaa
     9541 aatccaccaa tgaagcaaca ttcaaaaaat atatttctga catgggaaag gcgtttctaa
     9601 agccccttaa tccacaatat ccaatcatag aaatggacaa tgattgcgaa atagtaggtg
     9661 ttgtggttga tgccaggtgg gatattttct gaccagacac aaaacacaaa aagaaaccaa
     9721 agtatcaaaa taacttgcca caccttgaca ccttagttac cataaaacaa agttcgtaac
     9781 tgaggtatca tctcatgatc aataaagcta caactcttga ctgtctcgaa gaactgaaaa
     9841 acctcggcag cctcattaca ctaatagcaa aagcaacacc tgatgctaca ctctctagcg
     9901 atatagagtc atgcgcagga ctggcatggg atatgacaaa tagcatatcc agaaagctat
     9961 cgtcagcaat gcttttacag aacaaaaatt ctgcaatcaa caaccgtctt cgcacccaac
    10021 gcgaagcctg cggcttaaca accgccgaac tcgccaggct gctcgatctc gatgaagaaa
    10081 ttatcatcca gtgggagagc ggagagtatg aaccaactat cagtatgctt atcccactgg
    10141 caaatattct tggctgcgat ccgatgtggc tgttaactgg tgaggttact cctccggagc
    10201 aaccaaaaag tgaggagcag caacaccatg acgcatctca acaagtttgc cccttatctc
    10261 gcgaagctct tctgcggaag aaccaatacc aatggtgaca taatcgccgc ttcgcccttc
    10321 aaggtacatg cgaacatttt tatcaatcat tgcggaaaca gtctcaatat gaaaacactt
    10381 ctgagactcg ctatatagca gaacatataa gtcagctgag gaagccatga aaaagttcga
    10441 aaacataact gttctccatg ttgatgactt tgattataca aacccggaac ttctcccgga
    10501 ggttgtaaag gcaatagatg ttgccgatat agtgattaga gaaaagagaa ttgtcaaaaa
    10561 caggctcgca tgcacttcag gagcaatgac agaaacaacc tcacagcaag ataattacga
    10621 aggcatttgt ctggagcctg attcatttgc ggtaaatgtt tatcatttat tgcatgcaac
    10681 acaggtatta catatgtcca gtaatcacga aacgaaaaca ctcggcagcg aaattctgag
    10741 ttttgcatgt gagtatacaa aagctgctgc cgaaaaagaa ttagcgcaat aacaacaaat
    10801 atgccctgaa cgtttattgc ggttttatcg ccggggattg ttacaacctt aatccgcagg
    10861 aggctttatt gtgactttta taaagaatat ggcatcacac aaga
//
LOCUS       DADMHC010000132        10896 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.133, whole genome shotgun sequence.
ACCESSION   DADMHC010000132 DADMHC010000000
VERSION     DADMHC010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10896)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10896)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10896
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.133"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(228..2087)
                     /gene="gss"
                     /locus_tag="JNZ57_002867"
     CDS             complement(228..2087)
                     /gene="gss"
                     /locus_tag="JNZ57_002867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutathionylspermidine
                     amidase/synthase"
                     /protein_id="HAY8829018.1"
                     /translation="MSKGTTSQDAPFGTLLGYAPGGVAIYSSDYSSLDPQEYEDDAVF
                     RSYIDDEYMGHKWQCVEFARRFLFLNYGVVFTDVGMAWEIFSLRFLREVVNDNILPLQ
                     AFPNGSPRAPVAGALLIWDKGGEFKDTGHVAIITQLHGNKVRIAEQNVIHSPLPQGQQ
                     WTRELEMVVENGCYTLKDTFDDTTILGWMIQTEDTEYSLPQPEIAGELLKISGARLEN
                     KGQFDGKWLDEKDPLQNAYVQANGQVINQDPYHYYTITESAEQELIKATNELHLMYLH
                     ATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHHMITGRMDFCMDERGLKVYEYNAD
                     SASCHTEAGLILERWAEQGYKGNGFNPAEGLINELAGAWKHSRARPFVHIMQDKDIEE
                     NYHAQFMEQALHQAGFETRILRGLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQ
                     IREVSDREFAAVPIRTGHPQNEVRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLF
                     PHHRYLLDTDFTVNDELVKTGYAVKPIAGRCGSNIDLVSHHEEVLDKTSGKFAEQKNI
                     YQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVKK"
     gene            2292..3158
                     /gene="yghU"
                     /locus_tag="JNZ57_002868"
     CDS             2292..3158
                     /gene="yghU"
                     /locus_tag="JNZ57_002868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent disulfide-bond
                     oxidoreductase"
                     /protein_id="HAY8829019.1"
                     /translation="MTDNTYQPAKVWTWDKSAGGAFANINRPVSGPTHEKTLPVGKHP
                     LQLYSLGTPNGQKVTIMLEELLALGVTGAEYDAWLIRIGDGDQFSSGFVEVNPNSKIP
                     ALRDHTHNPPIRVFESGSILLYLAEKFGYFLPQDLAKRTETMNWLFWLQGAAPFLGGG
                     FGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAQHKFVAGDEYTIADMAIWPWFGN
                     VVLGGVYDAAEFLDAGSYKHVQRWAKEVGERPAVKRGRIVNRTNGPLNEQLHERHDAS
                     DFETNTEDKRQG"
     gene            complement(3281..3529)
                     /gene="hybG"
                     /locus_tag="JNZ57_002869"
     CDS             complement(3281..3529)
                     /gene="hybG"
                     /locus_tag="JNZ57_002869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation factor HybG"
                     /protein_id="HAY8829020.1"
                     /translation="MCIGVPGQVLAVGEDIHQLAQVEVCGIKRDVNIALICEGNPADL
                     LGQWVLVHVGFAMSIIDEDEAKATLDALRQMDYDITSA"
     gene            complement(3542..3883)
                     /gene="hypA"
                     /locus_tag="JNZ57_002870"
     CDS             complement(3542..3883)
                     /gene="hypA"
                     /locus_tag="JNZ57_002870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HAY8829021.1"
                     /translation="MHELSLCQSAVEIIQRQAEQHDVKRVTAVWLEIGALSCVEESAV
                     RFSFEIVCHGTVAQGCDLHIVYKPAQAWCWDCSQVVEIHQHDAQCPLCHGERLRVDTG
                     DSLIVKSIEVE"
     gene            complement(3876..4364)
                     /gene="hybE"
                     /locus_tag="JNZ57_002871"
     CDS             complement(3876..4364)
                     /gene="hybE"
                     /locus_tag="JNZ57_002871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-2 assembly chaperone"
                     /protein_id="HAY8829022.1"
                     /translation="MTEEIAGFQTSPKAQVQAAFEEIARRSMHDLSFLHPSMPVYVSD
                     FTLFEGQWTGCVITPWMLSAVIFPGPDQLWPLRKVSEKIGLQLPYGTMTFTVGELDGV
                     SQYLSCSLMSPLSHSMSIEEGQRLTDDCARMILSLPVTNPDVPHAGRRALLFGRRSGE
                     NA"
     gene            complement(4357..4851)
                     /locus_tag="JNZ57_002872"
     CDS             complement(4357..4851)
                     /locus_tag="JNZ57_002872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HAY8829023.1"
                     /translation="MRILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTA
                     GMELLGDMANRDHLIIADAIVSKKNTPGTMMILRDEEVPALFTNKISPHQLGLADVLS
                     ALRFTGEFPKKLTLVGVIPESLEPHIGLTPTVEAMIEPALEQVLAALRESGVEAIPRE
                     AIHD"
     gene            complement(4851..6554)
                     /gene="hybC"
                     /locus_tag="JNZ57_002873"
     CDS             complement(4851..6554)
                     /gene="hybC"
                     /locus_tag="JNZ57_002873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 large subunit"
                     /protein_id="HAY8829024.1"
                     /translation="MSQRITIDPVTRIEGHLRIDCEIENGVVSKAWASGTMWRGMEEI
                     VKNRDPRDAWMIVQRICGVCTTTHALSSVRAAESALNIDVPVNAQYIRNIILAAHTTH
                     DHIVHFYQLSALDWVDITSALQADPTKASEMLKGVSTWHLNSPEEFTKVQNKIKDLVA
                     SGQLGIFANGYWGHPAMKLPPEVNLIAVAHYLQALECQRDANRVVALLGGKTPHIQNL
                     AVGGVANPINLDGLGVLNLERLMYIKSFIDKLSDFVEQVYKVDTAVIAAFYPEWLTRG
                     KGAVNYLSVPEFPTDSKNGSFLFPGGYIENADLSSYRPITSHSDEYLIKGIQESAKHS
                     WYKDEAPQAPWEGTTIPAYDGWSDDGKYSWVKSPTFYGKTVEVGPLANMLVKLAAGRE
                     STQNKLNEIVAIYQKLTGNTLEVAQLHSTLGRIIGRTVHCCELQDILQNQYSALITNI
                     GKGDHTTFVKPNIPATGEFKGVGFLEAPRGMLSHWMVIKDGIISNYQAVVPSTWNSGP
                     RNFNDDVGPYEQSLVGTPVADPNKPLEVVRTIHSFDPCMACAVHVVDADGNEVVSVKV
                     L"
     gene            complement(6551..7729)
                     /gene="hybB"
                     /locus_tag="JNZ57_002874"
     CDS             complement(6551..7729)
                     /gene="hybB"
                     /locus_tag="JNZ57_002874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase cytochrome b subunit"
                     /protein_id="HAY8829025.1"
                     /translation="MSHDPQPLGGKIISKPVMIFGPLIVICMLLIVKRLVFGLGSVSD
                     LNGGFPWGVWIAFDLLIGTGFACGGWALAWAVYVFNRGQYHPLVRPALLASLFGYSLG
                     GLSITIDVGRYWNLPYFYIPGHFNVNSVLFETAVCMTIYIGVMALEFAPALFERLGWK
                     VSLKRLNKVMFFIIALGALLPTMHQSSMGSLMISAGYKVHPLWQSYEMLPLFSLLTAF
                     IMGFSIVIFEGSLVQAGLRGNGPDEKSLFVKLTNTISVLLAIFIVLRFGELIYRDKLS
                     LAFAGDFYSVMFWIEVLLMLFPLVVLRVAKLRNDSRMLFLSALSALLGCATWRLTYSL
                     VAFNPGGGYAYFPTWEELLISIGFVAIEICAYIVLIRLLPILPPLKQNDHNRHEASKA
                     "
     gene            complement(7719..8705)
                     /gene="hybA"
                     /locus_tag="JNZ57_002875"
     CDS             complement(7719..8705)
                     /gene="hybA"
                     /locus_tag="JNZ57_002875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 operon protein HybA"
                     /protein_id="HAY8829026.1"
                     /translation="MNRRNFIKAASCGALLTGALPSVSHAAAENHPPIPGSLGMLYDS
                     TLCVGCQACVTKCQDINFPERNPQGEQTWSNNDKLSPYTNNIIQVWTSGTGVNKDQEE
                     NGYAYIKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVP
                     KYDYNNPFGALHKCELCNQKGVERLDKGGLPGCVEVCPAGAVIFGTREELMAEAKKRL
                     ALKPGSEYHYPRQTLKSGDTYLHTVPKYYPHLYGEKEGGGTQVLVLTGVPYENLDLPK
                     LDDLSTGARSENIQHTLYKGMMLPLAVLAGLTVLVRRNTKNDHHDGGDDHES"
     gene            complement(8708..9826)
                     /gene="hybO"
                     /locus_tag="JNZ57_002876"
     CDS             complement(8708..9826)
                     /gene="hybO"
                     /locus_tag="JNZ57_002876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 small subunit"
                     /protein_id="HAY8829027.1"
                     /translation="MTGDNTLIHSHGINRRDFMKLCAALAATMGLSSKAAAEMAESVT
                     NPQRPPVIWIGAQECTGCTESLLRATHPTVENLVLETISLEYHEVLSAAFGHQVEENK
                     HNALEKYKGQYVLVVDGSIPLKDNGIYCMVAGEPIVDHIRKAAEGAAAIIAIGSCSAW
                     GGVAAAGVNPTGAVSLQEVLPGKTVINIPGCPPNPHNFLATVAHIITYGKPPKLDDKN
                     RPTFAYGRLIHEHCERRPHFDAGRFAKEFGDEGHREGWCLYHLGCKGPETYGNCSTLQ
                     FCDVGGVWPVAIGHPCYGCNEEGIGFHKGIHQLANVENQTPRSQKPDVNAKEGGNVSA
                     GAIGLLGGVVGLVAGVSVMAVRELGRQQKKDNADSRGE"
     gene            complement(10015..10302)
                     /locus_tag="JNZ57_002877"
     CDS             complement(10015..10302)
                     /locus_tag="JNZ57_002877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2623 domain-containing protein"
                     /protein_id="HAY8829028.1"
                     /translation="MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMY
                     EKTGDRQLSAWEAGILTRRYGLDKEMVMDFFRENNSCSTLRFFMAGYRLEN"
     gene            complement(10421..>10896)
                     /locus_tag="JNZ57_002878"
     CDS             complement(10421..>10896)
                     /locus_tag="JNZ57_002878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311911.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HAY8829029.1"
                     /translation="GYPGNDDKGRELQQQVDPTKLMNDFFAAIEFMQRYPQATGKVGI
                     TGFCYGGGVSNAAAVAYPELACAVPFYGRQAPTADVAKIEAPLLLHFAELDTRINEGW
                     PAYEAALKANNKVYEAYIYPGVNHGFHNDSTPRYDKSAADLAWQRTLKWFDKYLS"
BASE COUNT         2651 a         2989 c         2700 g         2556 t
ORIGIN      
        1 caaagtgaaa tatcattttt taacgataaa aagagtgtta tttcttgtgt atcagacaat
       61 aagcattcat tcaaaacctt tagaaataat caaaacacag gtattccact ggttaatata
      121 ttcacatatg aaatgaataa atattagaac atataaatat tgaatatttt gattaatccc
      181 cgtactgatt attcttcata atcagtacgg ggttgctaca acatgtatta ctttttcacc
      241 acaattaacg gttcaatatc actctctttt ttgatgacca gtgattcatc accgcgcaaa
      301 cacgtcccac cgtagttgcc gcccacggtg aaggtacata cctgaatgta tttaccgtcc
      361 actttcggca aacaccacag ttgctgatag atgtttttct gctcggcaaa tttaccgctg
      421 gttttgtcca gcacctcttc atgatggctg accaggtcga tattgctacc acagcgaccg
      481 gcaatcggtt tcactgcgta acctgttttc accaattcat cattaacagt gaaatcggta
      541 tccagcaggt aacgatggtg cgggaacagc gaccagagga tcggcagaat cgctttgttg
      601 ccggggatca ccgtccacag cggctcaaag actagcactt ccgggcgcag caatacgtcg
      661 ataagacgca cttcgttttg cggatgaccg gtacggattg gcaccgcagc aaactcacgg
      721 tcgctaactt cacgaatctg gtcaaacgcg gtttcccacg cccaggtttt ccacacgcag
      781 ttaaccagtc gcccttcccc atcaatcagt tgcccggcag catcccagcc cagttcatcc
      841 aatccacgca agatacgcgt ttcaaagccc gcctggtgca gcgcctgctc cataaactgc
      901 gcgtgatagt tttcctcgat atctttgtcc tgcatgatat ggacaaacgg acgtgcacga
      961 ctgtgtttcc aggcaccagc caattcgtta atcagccctt ccgccggatt gaagccgttg
     1021 cctttatagc cctgctccgc ccaacgttcg aggatcaagc ccgcttcggt atgacaggag
     1081 gcggagtcgg cgttgtactc gtaaaccttc aggccacgct catccatgca gaaatccata
     1141 cgaccagtga tcatatggtg acggcgacgc tgccaggaga gacgcaaacg tggccagagg
     1201 attttcggga tgtcgaacag cgccagcagg ttgtcatctt tcagtacctt gtcggttgcg
     1261 tgaagataca tcaggtgcag ctcgttggtg gctttaatta gctcctgctc ggcactctcg
     1321 gtaatggtgt agtaatgata aggatcctga ttgatcacct gaccgttggc ctgcacatag
     1381 gcgttttgca gcggatcttt ttcatccagc catttaccgt caaactggcc tttgttttcc
     1441 aggcgcgctc cgctgatttt cagcagctcg cctgcaattt ccggctgcgg taagctgtat
     1501 tcagtatctt ccgtctggat catccagccc agaatggtgg tgtcatcaaa agtgtctttc
     1561 agggtatagc agccgttttc gaccaccatc tccagctcac gcgtccactg ttgcccttgc
     1621 ggcaacgggg aatgaatcac gttctgttcc gcaatacgga ctttgttgcc atgcaattgg
     1681 gtaatgatgg cgacatggcc agtgtcttta aattcaccgc ctttatccca gataagaagc
     1741 gcacccgcga ccggcgcacg cggcgagccg ttaggaaatg cctgcaatgg caggatgttg
     1801 tcattaacca cttctcgcag gaagcgcagc gagaaaatct cccacgccat acccacgtca
     1861 gtaaagacca caccgtaatt cagaaagaga aaacggcgag caaattcaac gcattgccac
     1921 ttgtggccca tatattcgtc gtcgatatag ctacggaata cggcgtcatc ttcgtattcc
     1981 tgcgggtcga gagaactgta atctgaagag tagattgcta ccccacctgg ggcgtagccc
     2041 aataatgtcc cgaacggggc atcctggctg gtcgttcctt tgctcatcac tttaccttta
     2101 acaatacaac ctaagcagtt ggcgtaattg ttgtgctctg attacctgct cagcgacatt
     2161 aaccggacag aggtcagact aatcatacac ctcatcgcag cggctggcgc aaagggttaa
     2221 aaaattcaca ttctgtacag caagtgacct gccacactgc ttcaacacta ccactcagaa
     2281 ggcaactcac tatgacagac aatacttatc agcccgcgaa agtctggacg tgggataaat
     2341 ccgctggcgg cgcgttcgcc aatatcaatc gcccggtttc tggtccgacg catgaaaaaa
     2401 cgctgcccgt tggcaaacac ccattgcaac tttattcgct gggaacgccg aacggtcaga
     2461 aagtaacgat tatgcttgag gagctgctgg cgctgggcgt tactggtgca gagtacgacg
     2521 cctggctgat tcgtattggc gatggcgatc aattctccag cggctttgtc gaagtgaacc
     2581 caaactcgaa gatcccggcg ctgcgcgatc atacgcataa tccgccgatc cgtgtgtttg
     2641 aatctggttc gatcctgctt tatctggcgg agaaatttgg ctacttcctg ccgcaggatt
     2701 tggcaaagcg tactgaaacg atgaactggc tgttctggtt acagggcgcg gcaccgttcc
     2761 tcggcggtgg ttttggtcac ttttaccatt acgcaccggt aaagattgag tacgccatca
     2821 accgctttac catggaagcc aaacgtctgc tcgacgtgct ggataagcaa ctggcgcagc
     2881 ataagtttgt tgcgggcgat gagtacacca ttgcggatat ggcgatttgg ccgtggtttg
     2941 gcaacgtggt gttaggtggt gtgtatgatg ccgctgagtt tcttgatgcg ggcagttata
     3001 agcatgtaca acgctgggcg aaagaagtag gcgaacgtcc ggcggtgaaa cgtgggcgta
     3061 ttgttaaccg caccaacgga ccgctgaatg agcagttgca tgagcgccat gacgccagtg
     3121 atttcgagac gaatacggaa gataagcgtc aggggtaagg gttggtgttc gtcgcagcaa
     3181 gccatccagg ccggataagg cgttcacgcc gcatccggca atcgtgcaca atgcctgatg
     3241 cgacgctgcc gcgtcttatc aggcctacga aagctaatca tcacgcgctg gtaatgtcgt
     3301 aatccatttg gcgcagtgcg tctaatgtgg ctttggcttc atcttcgtcg atgatgctca
     3361 tggcaaatcc gacgtgtacc agcacccact ggcccagtag atcggctggg ttaccttcac
     3421 aaatcagggc gatattcacg tcgcgcttga taccacatac ttcaacctgc gcaagctggt
     3481 gaatatcttc accgacagcc agcacctggc ctggaacgcc aatacacatt attaactccg
     3541 gttattcaac ttcaatactt ttgacgatca gcgaatcgcc ggtatcgaca cgcaaccgct
     3601 cgccgtgaca gagcggacac tgcgcatcgt gctgatgaat ctccaccacc tggctgcaat
     3661 cccagcacca ggcctgggcg ggtttataga cgatatgtaa atcgcaccct tgcgccaccg
     3721 ttccgtggca gacaatttca aaactaaaac ggacggcgct ctcctcaacg caggagagcg
     3781 cgccaatttc cagccacacg gcggtgacgc gcttaacatc gtgctgctcc gcctgccgtt
     3841 ggataatttc aacggcgctc tggcaaagcg acaactcatg cattttcgcc actcctgcga
     3901 ccaaacagca gggcgcgacg ccctgcgtgt ggtacatccg gattcgtgac tggcagcgaa
     3961 aggatcattc gtgcgcagtc atccgtcagg cgttggccct cttcaatcga catactgtgc
     4021 gaaagcggtg acatcagcga acaggagagg tattgcgaaa caccgtccag ttcgccaacg
     4081 gtaaaggtca tggtgccata cggcagttgc agaccaattt tttcactcac tttgcgcagc
     4141 ggccagagtt gatccgggcc ggggaagata actgcactca gcatccacgg ggtgatcaca
     4201 caccccgtcc actgaccttc gaacagcgta aaatcagaaa catacaccgg cattgaagga
     4261 tgcagaaaag agagatcgtg catcgaacgc cgggcaattt cttcaaacgc tgcctgtact
     4321 tgcgccttcg gggaggtctg gaaacctgct atctcttcag tcatgaatcg cctcccgtgg
     4381 gatggcttcc acgcctgatt cgcgcagcgc agccagaacc tgctcaagcg caggttcaat
     4441 cattgcttca accgtcggcg ttaagccgat gtgtggctcc agcgattccg ggatcacgcc
     4501 gaccagggtc agctttttcg gaaactcacc ggtgaagcgc agggccgaca atacgtcggc
     4561 caggccaagc tgatgcggag agattttgtt ggtaaacaac gccggaactt cttcatcccg
     4621 caggatcatc atcgttcccg gcgtgttctt tttcgacaca atggcatccg caataatcag
     4681 atgatcgcga tttgccatgt cgccaagcag ctccattccc gccgtgccgc catcgaggat
     4741 ctcaacataa tccggcagaa tgtatcgttg ctctaacgct tcgacaatcc gcacaccgat
     4801 ggcttcatcg gtcagcaaaa tattgccgac ccctaagact aaaatacgca ttacagaacc
     4861 ttcactgaaa ccacttcgtt gccgtcggca tccactacgt gtaccgcaca ggccatgcac
     4921 gggtcgaagg agtgaatggt acgcaccact tccagcggtt tattcggatc agcaaccggt
     4981 gtacccacca gcgactgctc gtaaggaccg acgtcatcat tgaagttacg cggaccagag
     5041 ttccaggttg atggaacaac tgcctggtag ttactgataa taccgtcttt aataaccatc
     5101 cagtgagaga gcataccgcg cggcgcttcg aggaagccaa cacctttgaa ctcacccgtt
     5161 gccggaatgt tcggtttcac aaaggtggtg tgatcgcctt tgccgatatt ggtgatcagt
     5221 gcactgtatt gattttgcag gatatcctgc aattcgcagc agtgaacggt acgaccaata
     5281 atacggccca gcgtggagtg cagctgcgcc acttccagcg tgttgccagt cagtttctga
     5341 taaatcgcaa cgatttcatt cagtttgttc tgggtagatt cgcgacctgc cgccagtttc
     5401 accagcatat tagccagcgg acccacttct accgttttgc cgtagaaagt cggtgatttc
     5461 acccaggaat atttcccgtc gtcagaccaa ccatcataag ccggaatggt ggtaccttcc
     5521 cacggtgcct gcggcgcttc gtctttatac caggagtgct tcgcgctttc ctgaatgcct
     5581 ttgatcaggt attcatcgga atgagaagtg atcggacgat acgaggacag atccgcattc
     5641 tcaatgtagc cgcccgggaa caggaagctg ccgtttttac tgtcggtcgg gaattccggc
     5701 acgctcaggt agttcaccgc acctttaccg cgcgtcagcc attccgggta gaacgcggca
     5761 ataactgcgg tatcaacctt ataaacctgt tcaacaaagt cgctcagctt gtcgatgaaa
     5821 gacttgatgt acatcaggcg ctcaaggttc agcacgccca aaccgtcgag gttgatcggg
     5881 ttcgcgacac cacctaccgc caggttctga atgtgcggcg ttttaccgcc cagcagcgcc
     5941 acgacgcggt tagcgtcacg ctggcactcc agcgcctgca ggtagtgcgc taccgcaatc
     6001 aggttcactt ccggcggcag tttcatcgcc gggtgacccc agtagccatt ggcgaaaata
     6061 cccaactgac cgctggcaac cagatctttg atcttgttct gaactttagt gaactcttcc
     6121 ggactgttca gatgccaggt cgaaacgcct ttcagcattt cggaggcttt ggttgggtca
     6181 gcttgcagtg cagaagtgat gtccacccag tccagcgccg aaagctgata gaaatgaacg
     6241 atatggtcat gcgtggtgtg cgcagccaga atgatgttac ggatgtattg cgcgttaacc
     6301 ggaacgtcga tattcagcgc actttctgcc gcacgaacgg aagacagcgc gtgagtggta
     6361 gtacatacgc cacagatacg ttgcacaatc atccatgcat cgcgcggatc gcggtttttc
     6421 acgatctctt ccatgccgcg ccacatggta ccggaagccc atgctttcga aacgacgcca
     6481 ttttcgattt cgcaatcgat gcgtaaatgc ccctcaatac gggttaccgg atcaatagta
     6541 attctctggc tcatgctttg ctcgcctcat gacgattatg atcgttttgt tttaaaggag
     6601 gaagtatcgg cagtagacga atgagtacga tgtaagcgca aatctcaata gccacaaaac
     6661 caatagaaat caacagttct tcccaggtcg ggaagtaggc gtaaccgccg cccgggttga
     6721 atgccaccag cgaataggtc agacgccagg ttgcacaacc taacagtgcg ctcagtgctg
     6781 acaggaacag catgcgggaa tcattacgca gcttcgccac acgcagaacg accagcggga
     6841 agagcatcag caggacttca atccagaaca tcacggagta gaagtcaccg gcaaacgcta
     6901 acgacagctt gtcgcgatag ataagctcgc caaagcgcag cacgatgaaa atcgccagca
     6961 acacactgat ggtgttggtc agcttgacga acagactctt ttcatccgga ccgttgccac
     7021 gcagacccgc ctgcaccagc gaaccttcaa agatgacaat cgagaagccc atgatgaacg
     7081 ccgtcagcag cgagaacagc ggcaacattt catagctctg ccacaacgga tgcaccttgt
     7141 agcccgccga gatcatcagt gaccccattg aagactggtg catggtcggc aacagcgcgc
     7201 caagtgcaat gatgaagaac atcaccttgt tcagacgctt gagagaaacc ttccagccca
     7261 gacgttcaaa cagtgccgga gcaaactcca gtgccatcac gccgatatag atggtcatac
     7321 agaccgccgt ctcgaacagt accgagttca cgttgaagtg acccggaatg tagaagtacg
     7381 gcaggttcca gtagcgaccc acgtcgatag tgatcgacaa gccacccagt gagtaaccaa
     7441 acagactcgc caacagcgcc ggacgcacca gcggatggta ttgcccacgg ttaaagacgt
     7501 ataccgccca cgccagcgcc cagccgccac aggcaaagcc ggtaccaatc agcaggtcaa
     7561 acgcgatcca cacgccccac gggaagccgc cgttcaggtc agagacagag cccagaccga
     7621 acaccagacg cttcacaatc aggagcatac agatgacgat taacggtcca aaaatcatga
     7681 ccggtttact gatgattttg ccgcccagcg gttgtggatc atgactcatg atcgtctcct
     7741 ccgtcgtgat ggtcgttttt ggtgttgcga cgaaccagca cggttaagcc cgccagcaca
     7801 gccagtggta gcatcatgcc tttatacagg gtgtgttgaa tattttcgga acgcgcaccg
     7861 gtagaaagat cgtccagttt cggcaggtcg agattttcat aaggcacacc cgtcagtacc
     7921 agaacctgag taccgccgcc ctctttctcg ccgtacagat gcggataata tttcggcacc
     7981 gtatgcaggt aagtgtcgcc agatttcagc gtctgacgcg gatagtggta ttcgctgcca
     8041 ggcttcagcg ccagacgttt tttcgcctcc gccatcagct cttcacgcgt accgaaaatc
     8101 accgcgcccg ccgggcacac ttctacgcag ccaggcagac cgcctttatc gagacgttcc
     8161 acacctttct ggttgcacag ctcgcactta tgcagcgcac caaacgggtt gttgtagtcg
     8221 tacttcggca cgttgtacgg acaggcgacc atgcagtaac ggcaaccggt gcacacgtct
     8281 ttgtcgtaat ggacaatgcc ggttttcgga tcttttttca gtgcagagac cgggcacaca
     8341 gagacacagt tcggatcgac gcagtgcata cactgtttct taatgtacgc gtagccgttc
     8401 tcctcctggt ctttgttgac ccctgtgccg ctggtccaca cctgaatgat gttattggta
     8461 tacggcgaca gtttgtcgtt gttcgaccag gtctgttccc cttgcgggtt acgttcaggg
     8521 aagttgatat cctgacactt ggtgacgcaa gcctggcagc ctacgcacaa ggtcgagtcg
     8581 tacaacatcc ccagcgatcc cggaattggc gggtggtttt cagcagccgc atgactgaca
     8641 gacggcagcg cgcccgtcag caatgccccg caggaggctg ctttaataaa attacgtctg
     8701 ttcacggtta ttctccccgt gagtcagcgt tatctttctt ttgctgacga cccagttcac
     8761 gcaccgccat cacgctgaca ccggcaacca gcccaaccac accgccgagc aaaccaatag
     8821 cgcctgcaga gacgttgccg ccctctttag cgttaacatc cggtttctgt gaacgcggag
     8881 tctgattttc gacgttggca agctgatgga tgcctttatg gaagccgata ccttcttcgt
     8941 tacagccata gcatgggtga ccaatcgcta ccggccacac gccgccaaca tcgcagaatt
     9001 gcagcgttga gcagttgccg taagtttctg gccctttaca gccgaggtgg tacaggcacc
     9061 agccttcacg gtggccttca tcaccgaact ctttggcaaa acgaccagca tcgaagtgcg
     9121 ggcgacgttc gcagtgttcg tgaatcagac ggccataggc gaaggtcgga cgatttttgt
     9181 catccagttt cggcggtttg ccgtaagtga tgatgtgcgc aacggtcgcg aggaagttgt
     9241 gcgggttcgg cgggcagccc ggaatattga taacggtttt gcctggcaga acttcttgca
     9301 ggctgactgc gccagttggg ttaactccag ctgcggcaac accgccccac gcagagcagg
     9361 aaccgatagc gataatcgcg gctgcgcctt ctgccgcttt gcggatgtga tccacaatcg
     9421 gctcaccagc aaccatgcaa taaataccgt tatcttttaa tgggatggaa ccatccacaa
     9481 ccaacacata ctgccctttg tacttctcaa gtgcgttatg tttgttctct tcgacctgat
     9541 gaccgaaggc ggcggaaagc acttcgtgat actccagaga gatagtctcc agcacgaggt
     9601 tttctaccgt tggatgcgtt gcacgaagca gagattccgt acaaccggtg cactcctgcg
     9661 cgccaatcca gataactggc ggacgctgcg ggttagtaac cgattcggcc atctctgcag
     9721 cggctttgct acttaacccc atggtggcgg ctaatgctgc acaaagcttc atgaaatcac
     9781 gacggttaat gccgtgagaa tggatgaggg tgttatctcc agtcatttat agttattccg
     9841 ttgcgaagac ctggcatata ttttgcttca atcgcaaaat caataatgcg atcgatgcgc
     9901 catttaccac acatttatta tggttatcga tatcatgata ctgcggcggg gcgctaaaac
     9961 gaagggaaga agcattagtg taattaatta aagcaagata atacgtatgt ttgatcaatt
    10021 ttcgaggcga taaccggcca taaaaaagcg caacgtagaa caggaattat tctcacgaaa
    10081 gaaatccatt accatctctt tatccagtcc atagcggcgc gtcagaatac ccgcttccca
    10141 ggcgctaagc tggcgatctc cggtcttttc gtacatccgg tgtgagtagc ctaatacaaa
    10201 accgcgttta taatcggcac agaattttgt cacattaacc gcactgtcgg catgcgttgc
    10261 ttttaatccc gccattaagc ctttaccaaa atggttattc atcgttcacc tcattcgcta
    10321 tatattatca tatatagcga tattttaggc aaagaacgac ttttgcgcac gctatttttt
    10381 catgcttgtt taagacgtaa tcccgtaaga gataaaccca tcaggagaga tatttatcga
    10441 accatttcag cgtcctttgc caggcaagat cggcggcaga tttgtcataa cgaggcgtgg
    10501 aatcattatg gaatccgtga ttaacccccg gatagatata cgcctcatag accttattat
    10561 tggctttcaa cgccgcctca taagcgggcc agccctcgtt gattcgggtg tccagttccg
    10621 cgaagtggag tagtaaaggc gcttcaatct tcgccacatc ggcagtgggt gcctgacgac
    10681 cataaaacgg caccgcgcag gccagttccg gatacgcgac agccgccgcg ttcgatacgc
    10741 caccgccata gcaaaatccg gtaataccca ctttgcctgt cgcttgcgga tagcgttgca
    10801 taaactcaat tgcggcaaag aaatcattca tcagtttggt tggatcaacc tgctgttgca
    10861 gctcacgacc tttatcatca tttcccggat aacctc
//
LOCUS       DADMHC010000133        10864 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.134, whole genome shotgun sequence.
ACCESSION   DADMHC010000133 DADMHC010000000
VERSION     DADMHC010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10864
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.134"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            88..429
                     /locus_tag="JNZ57_002879"
     CDS             88..429
                     /locus_tag="JNZ57_002879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flxA-like family protein"
                     /protein_id="HAY8829030.1"
                     /translation="MATISSTSIPSIQTQSSNRASQGSDVASQIARISQQIIKLTQQI
                     KEIVDTSGSAEDKQKQAELIQQQITLLETQLAQLQKQQAEKAQEKEQRLSLNVSLLNP
                     VEKTTHIDIYI"
     gene            complement(420..1346)
                     /locus_tag="JNZ57_002880"
     CDS             complement(420..1346)
                     /locus_tag="JNZ57_002880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8829031.1"
                     /translation="MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENH
                     TGVRLLDRTTREVVLTDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQT
                     ISAHLIPQCIAESHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCE
                     AILSEPFFLLCHRDSALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQAN
                     IVQEIGHPATLFPMVAAGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNR
                     SLSTAAEALWDVVRDQGNALMAGREGDPLYQI"
     gene            1436..2434
                     /locus_tag="JNZ57_002881"
     CDS             1436..2434
                     /locus_tag="JNZ57_002881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter"
                     /protein_id="HAY8829032.1"
                     /translation="MKLFRILDPFTLTLITVVLLASFFPARGDFVPFFENLTTAAIAL
                     LFFMHGAKLSREAIIAGGGHWRLHLWVMCSTFVLFPILGVLFAWWKPVNVDPMLYSGF
                     LYLCTLPATVQSAIAFTSMAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNVHGAGGS
                     LEQVGKIMLQLLLPFVLGHLSRPWIGDWVSRNKKWIAKTDQTSILLVVYTAFSEAVVN
                     GIWHKVGWGSLLFIVVVSCVLLAIVIVVNVFMARRLGFNKADEITIVFCGSKKSLANG
                     IPMANILFPTSVIGMMVLPLMIFHQIQLMVCAVLARRYKRQTEQLQAQQESSADKA"
     gene            complement(2431..2649)
                     /locus_tag="JNZ57_002882"
     CDS             complement(2431..2649)
                     /locus_tag="JNZ57_002882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829033.1"
                     /translation="MEKEQLIEIANTIMPFGKYKGRRLIDLPEEYLLWFARKDEFPAG
                     KLGELMQITLLIKTEGLTQLVQPLKRPL"
     gene            complement(2651..4666)
                     /gene="ligA"
                     /locus_tag="JNZ57_002883"
     CDS             complement(2651..4666)
                     /gene="ligA"
                     /locus_tag="JNZ57_002883"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HAY8829034.1"
                     /translation="MESIEQQLTELRMTLRHHESLYHVMDAPEIPDAEYDRLMRELRE
                     LETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL
                     KNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH
                     GENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKR
                     PLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEED
                     RPTLGFDIDGVVIKVNSLEQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRT
                     GAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL
                     SERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMD
                     VDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTF
                     ARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAE
                     ESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVEL
                     GAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS"
     gene            complement(4737..5723)
                     /gene="zipA"
                     /locus_tag="JNZ57_002884"
     CDS             complement(4737..5723)
                     /gene="zipA"
                     /locus_tag="JNZ57_002884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HAY8829035.1"
                     /translation="MMQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRM
                     KSKRDDDYYDEDVEDDEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPPYASAQPR
                     QPVQQPPEAQVPPQHAPRPAQPVQQPAYQPQPEQPLQQPVSPQVAPAPQPVHSAPQPA
                     QQAFQPAEPVAAPQPEPVAEPAPVMDKPKRKEAVIIMNVAAHHGSELNGELLLNSIQQ
                     AGFIFGDMNIYHRHLSPDGSGPALFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSYG
                     DELQNFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQDIIREVKDANA"
     gene            5953..6714
                     /gene="cysZ"
                     /locus_tag="JNZ57_002885"
     CDS             5953..6714
                     /gene="cysZ"
                     /locus_tag="JNZ57_002885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter CysZ"
                     /protein_id="HAY8829036.1"
                     /translation="MVSSFTSAPRSGFYYFAQGWKLVSQPGIRRFVILPLLVNILLMG
                     GAFWWLFTQLDVWIPTLMSYVPDWLQWLSYLLWPLAVISVLLVFGYFFSTIANWIAAP
                     FNGLLAEQLEARLTGATPPDTGIFGIMKDVPRIMKREWQKFAWYLPRAIVLLILYFIP
                     GIGQTVAPVLWFLFSAWMLAIQYCDYPFDNHKVPFKEMRTALRTRKITNMQFGALTSL
                     FTMIPLLNLFIMPVAVCGATAMWVDCYRDKHAMWR"
     gene            6899..7870
                     /gene="cysK"
                     /locus_tag="JNZ57_002886"
     CDS             6899..7870
                     /gene="cysK"
                     /locus_tag="JNZ57_002886"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HAY8829037.1"
                     /translation="MSKIFEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCR
                     IGANMIWDAEKRGVLKPGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRK
                     LLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPE
                     IWEDTDGQVDVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGE
                     EIKPGPHKIQGIGAGFIPANLDLKLVDKVIGITNEEAISTARRLMEEEGILAGISSGA
                     AVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKELQQ"
     gene            8254..8511
                     /gene="ptsH"
                     /locus_tag="JNZ57_002887"
     CDS             8254..8511
                     /gene="ptsH"
                     /locus_tag="JNZ57_002887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003038086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein Hpr"
                     /protein_id="HAY8829038.1"
                     /translation="MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASA
                     KSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE"
     gene            8556..10283
                     /gene="ptsI"
                     /locus_tag="JNZ57_002888"
     CDS             8556..10283
                     /gene="ptsI"
                     /locus_tag="JNZ57_002888"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-protein phosphotransferase
                     PtsI"
                     /protein_id="HAY8829039.1"
                     /translation="MISGILASPGIAFGKALLLKEDEIVIDRKKISADQVDQEVVRFL
                     SGRAKASAQLETIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADA
                     AAHEVIEGQASALEELDDEYLKERAADVRDIGKRLLRNILGLKIIDLSAIQDEVILVA
                     ADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYL
                     ILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELAKLKDLPAITLDGHQVEVCANIG
                     TVRDVEGAERNGAEGVGLYRTEFLFMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTM
                     DIGGDKELPYMNFPKEENPFLGWRAIRIAMDRKEILRDQLRAILRASAFGKLRIMFPM
                     IISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFS
                     IGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELAGD
                     ERATLLLLGMGLDEFSMSAISIPRIKKIIRNTNFEDAKVLAEQALAQPTTDELMTLVN
                     KFIEEKTIC"
     gene            10324..10833
                     /gene="crr"
                     /locus_tag="JNZ57_002889"
     CDS             10324..10833
                     /gene="crr"
                     /locus_tag="JNZ57_002889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015833547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HAY8829040.1"
                     /translation="MGLFDKLKSLVSDDKKDTGTIEIIAPLSGEIVNIEDVPDVVFAE
                     KIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGE
                     GFKRIAEEGQRVKVGDTVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLPGSVTVG
                     ETPVIRIKK"
BASE COUNT         2647 a         2806 c         2690 g         2721 t
ORIGIN      
        1 ctatctgcga tttgtaagat tgatttttct tctcaagttc cttgttcttc taccgatatt
       61 acctcgtaca gtgacgagga ctgaacaatg gccactatct cttcaacttc aattccttcc
      121 atacaaacac agagtagtaa cagggcatca caaggtagcg atgttgcttc acaaatcgcg
      181 cggataagtc agcaaatcat caaactcact caacaaatta aagagattgt agacactagc
      241 ggcagtgctg aagacaagca aaaacaggcc gaattgattc aacagcaaat caccctactg
      301 gaaacacaac tggcgcagtt gcagaaacag caggcagaaa aggcgcagga gaaagagcag
      361 cgtttgtctc tgaatgtatc ccttctaaat cctgttgaaa aaacgactca tatcgatatc
      421 tatatctgat acaacggatc cccttcccga ccagccatta gcgcattgcc ctggtctcgt
      481 accacgtccc ataacgcttc agcggcggtg gaaagtgaac ggttcttcct gcgcaccagc
      541 atcaactggc gttcaacaac cggcgtaatg cgctttacca ccagtgggct accttcaggc
      601 aatggtagcg ccagtgcggg aagaatactg atgccgatgc ctgcggctac catcgggaac
      661 agcgtcgccg gatgtccaat ctcctgcaca atattcgcct gaataccatt gcgcgccagc
      721 gctgcgtcaa tcagcggtcg gctgcctgac gcgtaatcct gcaacaccaa tttcgctccc
      781 tgtaatgcct gccagggtac ataatcttcc acggccaaag cgctatcgcg atggcaaagc
      841 agaaagaaag gctcggaaag aatcgcttca cattgcagat cgcccactgg gcctggatcg
      901 atgacgatgc caaagtcgac atctccctgg cgaatacttt ccatcaccca ctgctgcgga
      961 cgatcgtgca ggacaaactg aatatctgga tagcggcgat ggctttcagc aatgcattgc
     1021 ggaataagat gcgcggaaat ggtctggctg gcagcgaccc gaacttttcc gctcagttgt
     1081 tgccccatac gcccggtatc gcgcaacgtg ctgttaagtt catccagcag tcgctcaaga
     1141 cgcaaagcca actgctgccc tgcatctgta agcaccactt cacgcgtggt tctgtccagc
     1201 aggcgaacac cagtatgatt ttccagctcc ttcacactgt gacttactgc cgactggctc
     1261 aagccgatac gctctcctgc acgactaaaa cttttctcct gcgctactgt gacgaaaacc
     1321 tttaattgtt ttaaagaata attcatctgt tttcttcatg aatggatgca ataaatcaat
     1381 tttatttctc aaactggaag aagcacaata gaaccatcga tcatctggag tctttatgaa
     1441 actttttcgt atcctcgatc ctttcacctt aaccctgatc acggtggtgt tgctggcctc
     1501 tttctttccg gccagaggcg atttcgtccc cttctttgaa aatctgacca ccgcagctat
     1561 tgccctgctg ttctttatgc acggcgcgaa gttgtcgcgt gaggcgatta ttgctggcgg
     1621 tggtcactgg cgactgcatt tgtgggtaat gtgcagcacc ttcgtgctgt ttccgattct
     1681 gggtgtactg tttgcctggt ggaaaccggt aaatgtcgac ccgatgctct actccggttt
     1741 tctctacttg tgcactctcc cggctaccgt gcagtctgca atcgccttca cgtcaatggc
     1801 gggcggtaac gtcgcggcgg cggtttgttc tgcgtcagca tccagcctgc tggggatttt
     1861 cctttcacca ttgctggttg gtctggtgat gaatgttcac ggtgcagggg gcagccttga
     1921 gcaggtcggt aaaattatgc tgcaactgct gctgccgttt gtgttggggc atctttcccg
     1981 gccgtggatt ggtgactggg tgtcgcgcaa taaaaaatgg attgcgaaaa ctgaccagac
     2041 gtccattctg ttggtggttt atacagcgtt cagcgaagcc gtcgttaatg gtatctggca
     2101 taaagttggc tggggatcat tgctgtttat cgtggtggtc agctgcgttc ttctggctat
     2161 cgtgattgta gttaacgtct ttatggcacg ccgactgggc ttcaataagg cagatgaaat
     2221 tactatcgtc ttttgtggtt cgaaaaagag tctggcaaat ggcatcccga tggcaaacat
     2281 tctgttcccc acatcggtga tcggtatgat ggtgctgccc ctgatgattt tccatcagat
     2341 ccaattgatg gtctgtgcgg tgctggcgcg tcgatacaaa cgccagaccg aacagttaca
     2401 ggcgcagcag gaaagcagcg ccgataaagc ttaaagcgga cgcttcaggg gctggaccag
     2461 ttgcgtcagc ccctcggttt taatcagcag cgtgatttgc attagctcac cgagcttccc
     2521 tgccgggaac tcatctttgc gggcaaacca cagcagatac tcctccggca ggtcgattaa
     2581 gcgacgccct ttgtatttgc caaacggcat tatcgtattg gctatttcaa tcagctgctc
     2641 tttttccatc tcagctaccc agcaaacgca gcatttccgc ttcgtcgatg acttcaatgc
     2701 ccagttcctg cgccttcgcc agtttagatc ctgcagcttc acccgcaatc accagatcgg
     2761 ttttcttcga cacgctgccc gcgactttcg cgcccagttc gaccagtcga gctttagcgt
     2821 catcacgcga catctggctt aagctgcccg taagcaccac ggttttacca gcaaacgggc
     2881 tgtcaatctc ttccgcgttg ataacgatcg gcgcaggcca gtgaacacct tccgccaaca
     2941 gctcgctgat gacattgcgg ttgctttctt cggcaaagaa gttgtgaacg tgggatgcaa
     3001 cgacaatgcc aacatcaggc accttttgca gctcttcaat cgaagcggct tccagcgctt
     3061 ccagcgtgcc gaaatatgcc gccagacctg ctgcggtggc ctcgccgact tcacggatgc
     3121 caagtgcata gaggaagcga gcaaaggtgg tttctttcgc tttttccagc gcgttaacca
     3181 cgttttgtgc cgattttggc cccatacgct ccagtccggt cagtttgcct gcggtgagtt
     3241 tgaacagatc tgccggagtg tggacatatt ctttttcaac cagctgatcg atgattttgt
     3301 cgcccattcc gtcaacatcc atagcacggc gggaaacaaa gtgtttcagc gactctttac
     3361 gctgcgcacc gcaaatcagg ccaccggtac agcgggcaac cgcttcacct tccacacgct
     3421 caacgtcaga accacatacc ggacaatgcg tcgggaatac aacctcacgg gtatcttccg
     3481 ggcgttcaga aagcacgacg ttaaccacct gcgggatcac gtcgccagcg cggcgaatca
     3541 ccactttatc gccaatgcgt aaaccaagac gttcgatttc atccgcattg tgtaaggttg
     3601 cgttactcac cagcacgcca gcaacatgga caggttccag acgcgcaaca ggcgtaatcg
     3661 cgccagtacg cccaacctga aactcgacgt cacgcacaaa ggtcatctgc tcctgcgccg
     3721 ggaatttaaa cgctaccgcc cagcgcgggg cacgcgcaac aaagccaagc tgctcctgct
     3781 gttccagtga gttgacctta atcaccacgc cgtcgatatc aaagcccagc gtcgggcggt
     3841 cttcttccac tttgtgatag aacgccagca cttcttccgc cgattcacaa agcgttaccc
     3901 gatcgctgac cggcaacccc cactttttaa attgcagtaa acggccaaga tgagtatccg
     3961 gcagctcgcc accttccaga acaccaacgc catagcagaa aaaagtgagc ggtcgcttcg
     4021 ctgtaatacg cggatcaagc tgacgcagtg aaccagctgc cgcattacgt gggttagcaa
     4081 aaactttccc gcccgtgcgt cgcgcatctt cgttaatctt ttcgaacccc gcctgcggca
     4141 ggaacacttc accacgcact tccagacgcg ccgggatatt ctctccatgc agcttcagcg
     4201 gaatggcgcg aatagtacgc acattagacg tgatatcttc cccggtggtg ccatcgccac
     4261 gggtcgcggc actgactaaa acgccatttt catacagaat actgacggca aggccatcca
     4321 gcttcagctc acagcaccag gtgactttct cgttgttttt cagacggtcc tgcacacgtt
     4381 tgttgaaagc aagaaagctt tcttcatcaa aaacgttatc cagtgacagc attggtactt
     4441 catggcgtat ctggctgaaa gccgccagcg gcgcagcacc tacacgttgg gtaggcgaat
     4501 caggcgtaat cagttctgga tgtttagttt ccagctcgcg cagttcgcgc atcagcctgt
     4561 cgtattcagc gtcgggaatt tccggcgcat ccatcacatg ataaagagat tcatgatggc
     4621 gaagcgtcat tcgcagttct gtcagttgtt gttcgattga ttccatatcg caccatcaat
     4681 gctaaaaacc cccgacaagc gggggttcga agaggagtta atttgcctta agtgtatcag
     4741 gcgttggcgt ctttgacttc gcggatgatg tcctggtact cgcgcaattt ctgcggagtc
     4801 atcatacggc gctgatcgtc aagcacgaca ccgcccactt catcggcaat atgctgcgca
     4861 gattgcagca tcagcttgaa gttctgcagc tcgtcaccgt aagacggtac ctgcataaag
     4921 atagtgacac ccggagtagt gaaatccttc atttcaggat caaaggttcc cggtttcacc
     4981 atattcgcca ggctgaataa cgccgggccg ctgccatccg ggctaagatg acgatggtaa
     5041 atattcatat cgccaaaaat gaagcccgct tgttgaatgc tgttaagaag cagttcaccg
     5101 tttagctcgc taccgtgatg cgccgcgacg ttcatgataa tcaccgcttc tttgcgcttc
     5161 ggtttatcca taactggagc cggttccgct acaggctcag gctgtggtgc cgctacgggt
     5221 tctgcaggct ggaaagcctg ttgtgccggt tgcggtgctg aatgcacagg ctgcggcgct
     5281 ggcgcgacct gtggcgaaac tggctgctgc aacggctgtt caggctgcgg ctgataggca
     5341 ggctgctgca ccggctgcgc tggacgcgga gcatgttgcg gcggtacctg cgcttcaggc
     5401 ggctgctgga ccggttgacg cggctgcgca gacgcataag gcggttggta ctggtgttgc
     5461 ggcgacggac gagcagcctc atgctcctga gcgttagccg gggcatgatt cacgcggtga
     5521 acacgaacct caccaacgcc ctcatcatct tcgacatcct cgtcataata atcgtcgtca
     5581 cgttttgact tcattcgttt taatggccga tcgcggaaca tagaagatcg ttctttacgg
     5641 ctggtccaga aaccatgtac cagtaaagcg attatggcga tcgcgccaac aatgattaat
     5701 atcagacgca aatcctgcat cattatattc tctgttgttc taacaccttg ccaccacggc
     5761 aaacatttac tcactaagag tatttgccga ttacctcaag tgcaagtgca ctattaactt
     5821 tcacagcaca aagatagatg aaatcgtgct ttttgctgtt ttttcgaaca tatcctaact
     5881 gtccattgcg caattacccg gtaaaatacg cagaattttc ctgggattgg tcaaaaggag
     5941 ctcatcctga ttatggtttc atcattcaca tctgccccac gcagcggttt ttactatttt
     6001 gcgcaaggct ggaagctcgt ctcgcaacct gggattcggc gtttcgttat tttaccgctg
     6061 ctggtcaata ttttgttgat ggggggcgca ttctggtggc tctttacaca gctcgatgtc
     6121 tggatcccga ctctcatgag ttacgttccg gactggctac aatggctgag ttatctgttg
     6181 tggcctctgg ctgtcatctc tgtgctgtta gtgtttggct atttcttctc cacgattgct
     6241 aactggattg ccgctccgtt taacggttta ttggctgaac aactggaagc acgattgact
     6301 ggcgctacac cgccagatac cgggattttc ggtatcatga aagatgtgcc gcgaatcatg
     6361 aaacgcgaat ggcaaaaatt tgcctggtat ctgccgcgcg caattgtatt actaattctt
     6421 tacttcatcc ctggtattgg gcaaaccgtc gcgccggtac tgtggttcct gtttagcgcc
     6481 tggatgttag ccatccagta ttgcgattac cccttcgata accacaaagt gccgtttaaa
     6541 gagatgcgca ccgccctgcg cacacgcaaa atcaccaata tgcagtttgg tgctttaacc
     6601 agcctgttta cgatgatccc gctgcttaat ctgttcatca tgcccgttgc cgtttgtggc
     6661 gcgacggcga tgtgggtcga ttgctatcgc gataaacacg cgatgtggcg gtaacaatct
     6721 accggttatt ttgtaaaccg tttgtgtgaa acaggggtgg cttatgccgc cccttattcc
     6781 atcttgcatg tcattatttc ccttctgtat atagatatgc taaatcctta cttccgcata
     6841 ttctctgagc gggtatgcta cctgttgtat cccaatttca tacagttaag gacaggccat
     6901 gagtaagatt tttgaagata actcgctgac tatcggtcac acgccgctgg ttcgcctgaa
     6961 tcgcatcggt aacggacgca ttctggcgaa ggtggaatct cgtaacccca gcttcagcgt
     7021 taagtgccgt atcggtgcca acatgatttg ggatgccgaa aagcgcggcg tgctgaaacc
     7081 aggcgttgaa ctggttgaac cgaccagcgg taataccggg attgcactgg cctatgtagc
     7141 tgccgctcgc ggttacaaac tcaccctgac catgccagaa accatgagta ttgaacgccg
     7201 caagctgctg aaagcgttag gtgcaaacct ggtgctgacg gaaggtgcta aaggcatgaa
     7261 aggcgcaatc caaaaagcag aagaaattgt cgccagcaat ccagagaaat acctgctgct
     7321 gcaacaattc agcaatccgg caaaccctga aattcacgaa aaaaccaccg gtccggagat
     7381 ctgggaagat accgacggtc aggttgatgt atttattgct ggcgttggga ctggcggtac
     7441 gctgactggc gtcagccgct acattaaagg caccaaaggc aagaccgatc ttatctctgt
     7501 cgccgttgag ccaaccgatt ctccagttat cgcccaggcg ctggcaggtg aagagattaa
     7561 acctggcccg cataaaattc agggtattgg cgctggtttt atcccggcta acctcgatct
     7621 caagctggtc gataaagtca ttggcatcac caatgaagaa gccatttcta ccgcccgtcg
     7681 tctaatggaa gaagaaggta ttcttgcagg tatctcttct ggagcagctg ttgccgcggc
     7741 gttgaaacta caagaagatg aaagctttac caacaagaat attgtggtta ttctaccatc
     7801 atcgggtgag cgttatttaa gcaccgcatt gtttgccgat ctcttcactg agaaagaatt
     7861 gcaacagtaa tgccagcttg ttaaaaatgc gtaaaaaagc acctttttag gtgctttttt
     7921 gtggcctgct tcaaactttc gcccctcctg gcattgattc agcctgtcgg aactggtatt
     7981 taaccagact aattattttg atgcgcgaaa ttaatcgtta caggaaaagc caaagctgaa
     8041 tcgattttat gatttggttc aattcttcct ttagcggcat aatgtttaat gacgtacgaa
     8101 acgtcagcgg tcaacacccg ccagcaatgg actgtattgc gctcttcgtg cgtcgcgtct
     8161 attaaaaact ggcgctaaca atacaggcta aagtcgaacc gccaggctag actttagttc
     8221 cacaacacta aacctataag ttggggaaat acaatgttcc agcaagaagt taccattaca
     8281 gctccgaacg gtctgcacac ccgccctgct gcccagtttg taaaagaagc taagggcttc
     8341 acttctgaaa ttactgtgac ttccaacggc aaaagcgcca gcgcgaaaag cctgtttaaa
     8401 ctgcagactc tgggcctgac tcaaggtacc gttgtgacta tctccgcaga aggcgaagac
     8461 gagcaaaaag cggttgaaca tctggttaaa ctgatggcgg aactcgagta atttcccggg
     8521 ttcttttaaa aatcagtcac aagtaaggta gggttatgat ttcaggcatt ttagcatccc
     8581 cgggtatcgc tttcggtaaa gctctgcttc tgaaagaaga cgaaattgtc attgaccgga
     8641 aaaaaatttc tgccgaccag gttgatcagg aagttgtacg ttttctgagc ggtcgtgcca
     8701 aggcatcagc ccagctggaa acgatcaaaa cgaaagctgg tgaaacgttc ggtgaagaaa
     8761 aagaagccat ctttgaaggg catattatgc tgctcgaaga tgaggagctg gagcaggaaa
     8821 tcatagccct gattaaagat aaacacatga cagctgacgc agctgctcat gaagttatcg
     8881 aaggtcaggc ttctgccctg gaagagctgg atgatgaata cctgaaagaa cgtgcggctg
     8941 acgtacgtga tatcggtaag cgcctgctgc gcaacatcct gggcctgaag attatcgacc
     9001 tgagcgccat tcaggatgaa gtcattctgg ttgccgctga cctgacgccg tccgaaaccg
     9061 cacagctgaa cctgaagaag gtgctgggtt tcatcaccga cgcgggtggc cgtacttccc
     9121 acacctctat catggcgcgt tctctggaac tgcctgctat cgtgggtacc ggtagcgtca
     9181 cctctcaggt gaaaaatgac gactatctga ttctggatgc cgtaaataat caggtttacg
     9241 tcaatccaac caacgaagtt attgataaaa tgcgcgctgt tcaggagcaa gtggcttctg
     9301 aaaaagcaga gcttgctaaa ctgaaagatc tgccagctat tacgctggac ggtcaccagg
     9361 tagaagtatg cgctaacatt ggtacggttc gtgacgttga aggtgcagag cgtaacggcg
     9421 ctgaaggcgt tggtctgtat cgtactgagt tcctattcat ggaccgcgac gcgctgccca
     9481 ctgaagaaga acagtttgct gcttacaaag cagtggctga agcgtgtggc tcgcaggcgg
     9541 ttatcgttcg taccatggac atcggcggcg acaaagagct gccatacatg aacttcccga
     9601 aagaagagaa cccgttcctc ggctggcgcg ctatccgtat cgcgatggat cgtaaagaga
     9661 tcctgcgcga tcagctccgc gctatcctgc gtgcctcggc tttcggtaaa ttgcgcatta
     9721 tgttcccgat gatcatctct gttgaagaag tgcgtgcact gcgcaaagag atcgaaatct
     9781 acaaacagga actgcgcgac gaaggtaaag cgtttgacga gtcaattgaa atcggcgtaa
     9841 tggtggaaac accggctgcc gcaacaattg cacgtcattt agccaaagaa gttgatttct
     9901 ttagtatcgg caccaatgat ttaacgcagt acactctggc agttgaccgt ggtaatgata
     9961 tgatttcaca cctttaccag ccaatgtcac cgtccgtgct gaacttgatc aagcaagtta
    10021 ttgatgcttc tcatgctgaa ggcaaatgga ctggcatgtg tggtgagctt gctggcgatg
    10081 aacgtgctac acttctgttg ctggggatgg gtctggacga attctctatg agcgccattt
    10141 ctatcccgcg cattaagaag attatccgta acacgaactt cgaagatgcg aaggtgttag
    10201 cagagcaggc tcttgctcaa ccgacaacgg acgagttaat gacgctggtt aacaagttca
    10261 ttgaagaaaa aacaatctgc taatccacga gatgcggccc aatttactgc ttaggagaag
    10321 atcatgggtt tgttcgataa actgaaatct ctggtttccg acgacaagaa ggataccgga
    10381 actattgaga tcattgctcc gctctctggc gagatcgtca atatcgaaga cgtgccggat
    10441 gtcgtttttg cggaaaaaat cgttggtgat ggtattgcta tcaaaccaac gggtaacaaa
    10501 atggtcgcgc ctgtagacgg taccattggt aaaatctttg aaaccaatca cgcgttctct
    10561 atcgaatctg atagcggcgt tgaactgttc gtccacttcg gtatcgacac cgttgaactg
    10621 aaaggcgaag gcttcaagcg tattgcagaa gaaggtcagc gcgtgaaagt tggcgatact
    10681 gtcattgaat ttgatctgcc gctgctggaa gagaaagcca agtctaccct gactccggtt
    10741 gttatctcca acatggacga aatcaaagaa ctgatcaaac tgcccggtag cgtaaccgtg
    10801 ggtgaaaccc cggttatccg catcaagaag taattcttgc cgcagtgaaa aatggcgccc
    10861 atcg
//
LOCUS       DADMHC010000134        10857 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.135, whole genome shotgun sequence.
ACCESSION   DADMHC010000134 DADMHC010000000
VERSION     DADMHC010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10857)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10857)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10857
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.135"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..1355
                     /gene="yeaV"
                     /locus_tag="JNZ57_002890"
     CDS             <1..1355
                     /gene="yeaV"
                     /locus_tag="JNZ57_002890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="BCCT family transporter YeaV"
                     /protein_id="HAY8829041.1"
                     /translation="LSWLFMFICAGLGSSTLYWGVAEWAYYYQTPGLNIAPRSQQALE
                     FSVPYSFFHWGISAWATYTLASLIMAYHFHVRKNKGLSLSGIIAAITGVRPQGPWGKL
                     VDLMFLIATVGALTISLVVTAATFTRGLSALTGLPDNFTVQAFVILLSGGIFCLSSWI
                     GINNGLQRLSKMVGWGAFLLPLLVLIVGPTEFITNSIINAIGLTTQNFLQMSLFTDPL
                     GDGSFTRNWTVFYWLWWISYTPGVAMFVTRVSRGRKIKEVIWGLILGSTVGCWFFFGV
                     MESYAIHQFINGVINVPQVLETLGGETAVQQVLMSLPAGKLFLAAYLGVMIIFLASHM
                     DAVAYTMAATSTRNLQEGDDPDRGLRLFWCVVITLIPLSILFTGASLETMKTTVVLTA
                     LPFLVILLVKVGGFIRWLKQDYADIPAHQVEHYLPQTPVEALEKTPVIPAGTVFKGDN
                     "
     gene            1387..2511
                     /gene="yeaW"
                     /locus_tag="JNZ57_002891"
     CDS             1387..2511
                     /gene="yeaW"
                     /locus_tag="JNZ57_002891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine monooxygenase subunit YeaW"
                     /protein_id="HAY8829042.1"
                     /translation="MSNLSPDFVLPENFCANPQEAWTIPARFYTDQNAFEHEKENVFA
                     KSWICVAHSSELANANDYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSGEGK
                     AKNVITCPYHAWAFKLDGNLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFINMDPN
                     ATSVEDQLPGLGAKVLEACPEVHDLKLAARFTTRTSANWKNIVDNYLECYHCGPAHPG
                     FSDSVQVDRYWHTMHGNWTLQYGFAKPSEQSFKFEEGTDAAFHGFWLWPCTMLNVTPI
                     KGMMTVIYEFPVDSETTLQNYDIYFTNEELTDEQKSLIEWYRDVFRPEDLRLVESVQK
                     GLKSRGYRGQGRIMADSSGSGISEHGIAHFHNLLAQVFKD"
     gene            2567..3532
                     /gene="yeaX"
                     /locus_tag="JNZ57_002892"
     CDS             2567..3532
                     /gene="yeaX"
                     /locus_tag="JNZ57_002892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine monooxygenase subunit YeaX"
                     /protein_id="HAY8829043.1"
                     /translation="MSDYQMFEVQVSQVEPLTEQVKRFTLVATDGKPLPAFTGGSHVI
                     VQMSDGDNQYSNAYSLLSSPHDTSCYQIAVRLEENSRGGSRFLHQQVKVGNRLTISTP
                     NNLFALIPSARKHLFIAGGIGITPFLSHMAELQHSDVDWQLHYCSRNPESCAFRDELV
                     QHPQAEKVHLHHSSTGTRLELARLLADIEPGTHVYTCGPEALNEAVRSEAARLDIAAD
                     TLHFEQFAIEDKTGDAFTLVLACSGKEFVVPEEMTILQVIENNKAAKVECLCREGVCG
                     TCETAILEGEADHRDQYFSDEERASQQSMLICCSRAKGKRLVLDL"
     gene            complement(3586..4701)
                     /gene="rnd"
                     /locus_tag="JNZ57_002893"
     CDS             complement(3586..4701)
                     /gene="rnd"
                     /locus_tag="JNZ57_002893"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310540.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HAY8829044.1"
                     /translation="MITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFD
                     GEHLALIDPLGITDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQIL
                     SAFCGRPMSWGFASMVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITA
                     KLMVETEASGWLPAALDECRLMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLAD
                     WRLRKARERDLAVNFVVREEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLTLVE
                     KVQTLPEEALPQPMLNLMDMPGYRKAFKAIKSLITDVSETHKISAELLASRRQINQLL
                     NWHWRLKPQNNLPELISGWRGELMAEALHNLLQEYPQ"
     gene            complement(4783..6468)
                     /gene="fadD"
                     /locus_tag="JNZ57_002894"
     CDS             complement(4783..6468)
                     /gene="fadD"
                     /locus_tag="JNZ57_002894"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase FadD"
                     /protein_id="HAY8829045.1"
                     /translation="MKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVN
                     MGEVMTFRKLEERSRAFAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVV
                     NVNPLYTPRELEHQLNDSGASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAK
                     GTVVNFVVKYIKRLVPKYHLPDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTT
                     GVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIELG
                     GQNLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGG
                     MPVQQVVAERWVKLTGQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLV
                     DDDDNEVPPGQPGELCVKGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRI
                     VDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSL
                     TEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKVDNKA"
     gene            complement(6673..7254)
                     /gene="yeaY"
                     /locus_tag="JNZ57_002895"
     CDS             complement(6673..7254)
                     /gene="yeaY"
                     /locus_tag="JNZ57_002895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Slp family lipoprotein YeaY"
                     /protein_id="HAY8829046.1"
                     /translation="MAVQKNVIKGILAGTFALMLSGCVTVPDAIKGSSPTPQQDLVRV
                     MSAPQLYVGQEARFGGKVVAVQNQQGKTRLEIATVPLDSGARPTLGEPSRGRIYADVN
                     GFLDPVDFRGQLVTVVGPITGAVDGKIGNTPYKFMVMQVTGYKRWHLTQQVIMPPQPI
                     DPWFYGGRGWPYDYGGWGWYNPGPARVQTVVTE"
     gene            complement(7294..7989)
                     /gene="tsaB"
                     /locus_tag="JNZ57_002896"
     CDS             complement(7294..7989)
                     /gene="tsaB"
                     /locus_tag="JNZ57_002896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HAY8829047.1"
                     /translation="MRILAIDTATEACSVALWNDGTVNAHFELCPREHTQRILPMVQD
                     ILTTSGTSLTDINALAYGRGPGSFTGVRIGIGIAQGLALGAELPMIGVSTLMTMAQGA
                     WRKNGATRVLAAIDARMGEVYWAEYQRDENGIWRGEETEAVLKPELVHERMQQLSGEW
                     VTVGTGWQAWPDLGKESGLVLRDGEVLLPATEDMLPIACQIFAEGKTVAVEHAEPVYL
                     RNNVAWKKLPGKE"
     gene            complement(8047..9957)
                     /locus_tag="JNZ57_002897"
     CDS             complement(8047..9957)
                     /locus_tag="JNZ57_002897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HAY8829048.1"
                     /translation="MTDDFAPDGQLAKAIPGFKPREPQRQMAVAVTQAIEKGQPLVVE
                     AGTGTGKTYAYLAPALRAKKKVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKG
                     RSNYLCLERLEQQALAGGDLPVQILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPL
                     VTSTNDNCLGSDCPMYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPE
                     ADVMIFDEAHQLPDIASQYFGQSLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLA
                     QSAQDFRLQLGEPGYRGNLRELLANPQIQRAFLLLDDTLELCYDVAKLSLGRSALLDA
                     AFERATLYRTRLKRLKEINQPGYSYWYECTSRHFTLALTPLSVADKFKELMAQKPGSW
                     IFTSATLSVNDDLHHFTSRLGIEQAESLLLPSSFDYSRQALLCVPRNLPQTNQPGSAR
                     QLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSKGQLLQQFV
                     SAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPFTSPDDPLLKARMEDCRLRGGDPFD
                     EVQLPDAVITLKQGVGRLIRDADDRGVLVICDNRLVMRPYGATFLASLPPAPRTRDIA
                     RAVRFLAIPSSR"
     gene            10089..10433
                     /locus_tag="JNZ57_002898"
     CDS             10089..10433
                     /locus_tag="JNZ57_002898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HAY8829049.1"
                     /translation="MTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLA
                     QIDAVLEKQGSNKSSILDATIFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNP
                     KYKVEIKIVAAV"
     gene            10795..>10857
                     /locus_tag="JNZ57_002899"
     CDS             10795..>10857
                     /locus_tag="JNZ57_002899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001166138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1889 family protein"
                     /protein_id="HAY8829050.1"
                     /translation="MQIKVIYSLIDNMVNFKDKNM"
BASE COUNT         2586 a         2906 c         2696 g         2669 t
ORIGIN      
        1 cgctctcctg gctgtttatg tttatttgtg ccggtttagg ttcttctacg ctttattggg
       61 gggttgctga atgggcctat tattatcaaa cacctggatt aaatatcgca ccgcgttcac
      121 aacaggcact cgaatttagc gttccctact ctttcttcca ctggggcatc agcgcctggg
      181 caacttatac gctggcctca ttaatcatgg cttatcactt tcatgtgcgg aaaaacaaag
      241 gtctgagcct ttccggcatt attgctgcta ttaccggcgt tcgcccgcaa ggcccatggg
      301 gaaaactggt tgatttgatg ttcctgatcg ccactgtcgg cgcactgact atttcccttg
      361 ttgtcaccgc agcaaccttt actcgtggac tttccgcact gacaggttta cccgacaact
      421 tcaccgtgca ggcatttgtg atcctgcttt ctggcggcat tttttgccta agctcgtgga
      481 ttggtatcaa caacggtttg caacgtctga gcaaaatggt tggctggggc gcgttcctgc
      541 tgccattact ggtgctgatt gtcggcccaa ccgaatttat taccaacagc atcatcaatg
      601 ccatcggcct gaccacgcaa aacttcctgc aaatgagctt attcaccgat ccgcttggcg
      661 atggttcatt tacccgcaac tggaccgttt tctactggct gtggtggatc tcatacaccc
      721 ctggcgtagc aatgtttgtc acccgcgttt cccgcggtcg taagattaaa gaagttatct
      781 ggggactgat cctcggcagc accgtcggtt gctggttctt cttcggcgta atggaaagct
      841 atgccattca tcagtttatc aatggcgtaa tcaacgtccc acaggtgctg gaaacactgg
      901 gcggcgaaac agctgtacag caagttctga tgtcgttgcc agccggtaaa ttgttcctcg
      961 ccgcatacct gggcgtgatg attattttcc ttgcctcgca tatggatgca gtggcctaca
     1021 ccatggcggc gaccagtacg cgtaatctcc aggaaggtga cgatcctgac cgtgggctgc
     1081 gtcttttctg gtgcgtggtg atcactctga tcccgctttc catcttgttt accggtgctt
     1141 cgctggaaac gatgaaaacc accgtcgtgc tcacagccct tcccttcctc gtcattttac
     1201 tggtgaaagt cggcggattt attcgctggc tgaaacagga ttacgccgac attccggctc
     1261 atcaagttga acattatctc ccgcagacac cggttgaagc cctggaaaaa acaccagtga
     1321 tccctgcggg aaccgtattc aaaggcgaca actgagcgcc atcatcctaa cgataaaggt
     1381 atccctatga gcaatctgag ccctgacttt gtactacccg aaaatttttg cgctaacccg
     1441 caagaggcgt ggaccattcc tgcccgtttt tataccgatc agaacgcgtt tgaacacgaa
     1501 aaagagaacg tcttcgccaa aagctggatt tgcgtcgctc acagcagcga actggcgaat
     1561 gccaatgatt atgtgacgcg tgagatcatt ggcgaaagca tcgtgctggt acgcggtcgt
     1621 gataaggttt tgcgcgcgtt ctataacgtg tgtccgcacc gtggtcatca gttgttgagc
     1681 ggtgaaggaa aagcaaaaaa tgtgattacc tgcccgtatc acgcatgggc attcaaactc
     1741 gatggcaatc tggcccatgc acgtaactgc gaaaacgtcg ccaatttcga tagcgacaaa
     1801 gcgcaactgg ttccggtgcg tctggaagaa tatgccggat tcgtcttcat caacatggac
     1861 cccaacgcca ccagcgtaga agatcagtta cccggtctgg gcgcgaaagt gctggaagcc
     1921 tgcccggaag tccacgatct gaaactggcg gcccgcttta ccacccgcac gtctgccaac
     1981 tggaagaaca ttgtcgataa ctatctcgag tgctatcact gtggtccggc gcatccaggt
     2041 ttctccgact ccgtacaggt tgatcgttac tggcacacca tgcacggtaa ctggacgctg
     2101 caatacggtt tcgccaaacc gtccgaacag tcgtttaaat ttgaagaggg tacggatgcg
     2161 gcattccacg gtttctggct gtggccgtgc acgatgctga acgtcacccc gatcaaaggg
     2221 atgatgacgg tcatttatga attcccggtg gattctgaaa ctaccctgca aaactacgat
     2281 atttacttca ccaatgaaga gttaaccgac gagcaaaaat cgctgattga gtggtatcgc
     2341 gatgtgttcc gtccggaaga tttacgtctg gttgaaagcg tacagaaagg gctgaaatcg
     2401 cgtggctatc gtggtcaggg gcgcatcatg gccgacagta gcggtagtgg catttccgaa
     2461 catggtatcg cccatttcca taatctgctg gcgcaggtgt ttaaggacta atgacatcgg
     2521 cggcggtatt ttccgccgct gggctgattt ttgatggagt acagcaatgt cagactatca
     2581 aatgtttgaa gtacaggtga gccaggttga accccttacc gaacaggtga aacgcttcac
     2641 gctggtggca accgatggca aaccgctgcc tgcgttcacc ggaggaagtc acgtcattgt
     2701 gcagatgagc gatggtgata accagtacag caatgcgtat tcactactga gttcgccgca
     2761 tgacacctct tgttatcaga ttgccgttcg gctggaggaa aactcgcgcg gcggttcccg
     2821 ctttttgcat cagcaggtaa aagtgggcaa tcggttaacg atttcaacgc ctaataacct
     2881 gtttgcgcta attccctcag ccagaaagca tctgtttatc gcgggcggta ttggtatcac
     2941 ccctttcctg tcgcacatgg cagagctgca acacagcgac gtcgactggc agctacatta
     3001 ctgctcgcga aatccagaaa gttgcgcatt tcgtgatgag ctagtccagc atccgcaggc
     3061 tgagaaagtt cacttgcatc actcatcaac cggaacacga ctggaattag cgcgattatt
     3121 ggcggatatc gaacctggca cacacgttta tacctgtggt cccgaggcgc taaatgaagc
     3181 ggtaagaagt gaagctgcgc gtctggacat cgccgccgat acgctgcact ttgagcaatt
     3241 tgctatcgaa gacaaaaccg gcgatgcctt taccctggtg cttgcctgtt ccggaaaaga
     3301 gtttgtggtg ccggaagaga tgactatttt gcaggttatt gaaaataata aagccgcgaa
     3361 agtggaatgt ttatgtcgtg aaggggtatg cggaacctgc gaaacagcaa tactggaagg
     3421 tgaagctgac catcgggatc agtattttag cgatgaagag cgtgccagcc agcaaagtat
     3481 gttgatctgt tgttcgcgtg cgaagggtaa acgcctggtg ttggatttgt agtttgccaa
     3541 agccggatgt ggcgctgagc gcgcccagtc cggcttcgga agattttact gcggatattc
     3601 ctgcaataaa ttgtgtaatg cttccgccat cagctcacca cgccagccgg aaatcagctc
     3661 cggcaaattg ttctgcggtt tcagtctcca gtgccagttc agcagttggt tgatttgccg
     3721 acgcgatgcc agtaattcgg cgctgatctt atgcgtttcg ctcacgtcag taatcagcga
     3781 cttaatcgct ttaaacgctt tacgataacc aggcatgtcc atcaggttaa gcatcggctg
     3841 cggtaaggcc tcttccggca atgtctgcac tttttccacc agcgtcagca gcgttttacc
     3901 gtgaaagcgg atttcgctac cggataaacc caagctgtcc agttcgccta aacttcccgg
     3961 catataacgc gcgaccgacc acaaatgctc ttcacgcacg acaaagttca ccgccagatc
     4021 acgctctcgc gccttgcgca gtcgccagtc ggctaacagt tgcagacagg ccagttggcg
     4081 tgtgcgtaac tgccaggcat tggtgatatc acgccaggca tcttccggcg caacgacttc
     4141 ctgacgacgc atttgcatca ggcggcattc atccagcgcc gcaggtagcc agccggaggc
     4201 ctccgtttct accataagct tggcggtgat cggtaacaga taccagacat ccgccgctgc
     4261 gtattcacac tgacgttcgg tcagcggtct ggccagccag tcggtgcgcg attcactctt
     4321 gtccagcgta acgccggaat actcttccac catggaagcg aaaccccatg acatcgggcg
     4381 tccgcagaag gcagaaagga tttgcgtgtc aatcaagggt tgtggtaatt cgccaaagac
     4441 attgaggaac acttccagat cttcactgcc tgcatggaga aattttgtga tggacggatc
     4501 gcgcaggatc gctttcagcg gtgaccagtc ggtgatcccg agaggatcaa ttagcgccag
     4561 atgctcgcca tcgaaaagtt gaatcaaccc cagctgcggg taataagtgc gcgtacgaac
     4621 aaattcagta tccagggcta tcgccggaaa ggcacggacg gcttcacaca aagaagccag
     4681 cgcatcgtcc gtggtaatca tttggtaatt caaattgttt tctctttagt gggcgtcaaa
     4741 aaaaacgccg gattaaccgg cgtctgacga ctgacttaac gctcaggctt tattgtccac
     4801 tttgccgcgc gcttcgtcac gtaattctcg tcgcaaaatt tttccgacgt tagatttcgg
     4861 taactcatca cgaaactcca ccagcttcgg tactttgtat cccgtgagct gacggcggca
     4921 aaaagtcacc agtgactctt cggtaagcga tggatctttt ttcactacga agattttcac
     4981 cgcttcacca ctggagccgg aaggtacgcc aacagccgcg acttcctgta cgccaggatg
     5041 ctgcatgacg acatcttcaa tctcgttggg atagacgtta aaaccggaaa ccagaatcat
     5101 gtctttttta cgatcgacaa tgcgcaggaa tccttcttca tccattaccg cgatgtcgcc
     5161 ggtgtgtaac cagccatttt tgatgatttc atcggtagca tcgggacgct gccagtaacc
     5221 cagcatcacc tgcggtcctt tgacacaaag ctcacccggt tgacctggtg gtacttcatt
     5281 atcatcatca tccaccagtt tggcttccgt cgacggcacc ggcaaaccga tgctaccact
     5341 atgataatca atatcatatg ggttaacgct gaccagcggc gcacactcgg taaggccata
     5401 gccttccagc agatactgtc cggtcagttt cacccaacgc tctgccacca cttgctgcac
     5461 tggcatccca ccgcctgcgg aaagatgcag actggagaaa tccagctgct ggaactcttt
     5521 attgttcagc aacgcattga acaaggtgtt aacgccagtg atagcggtaa acggatattt
     5581 cgctaactct tttaccaacc ctggaatatc acgcgggtta gtgataagca ggttctgccc
     5641 acccagttcg ataaacagca ggcagttaat ggtcagggca aaaatgtgat acagcggcag
     5701 tgccgttact accagttctt tacctggatg cagcaacggc ccataggtgg cgttgacctg
     5761 ttccaggttc gccagcatat tgcggtgagt cagcatcgcg cctttcgcca cacctgtggt
     5821 gccgccggtg tattgcagga aggctaaatc ttccggcacc agttcgggtt tgacgtactg
     5881 catccggtag ccgttatgca gtgcgctacg aaatgaaatg gcatctggca gatggtattt
     5941 cggcaccaaa cgcttgatgt atttaacaac gaaattgact accgtgcctt ttgccgtaga
     6001 tagctgatcg cccatacggg tcagaattac gtgctgaacg gcggttttat caaccacttt
     6061 ttccagtgtg tgagcaaagt tagacacgat aacaatcgcc gatgcgccgc tatcgttaag
     6121 ctgatgctca agctcacgcg gggtatacaa cgggttaacg tttacgacga tcatcccggc
     6181 acgcaaaatg ccaaacagcg ccaccggata ttgcaataaa ttaggcatca tcaacgcaac
     6241 gcgatcgcct ttcttcagcc ccaacccttg ttgcaaataa gcggcaaacg cgcgactgcg
     6301 ttcttccagc ttgcggaagg tcatcacctc ccccatattc acaaacgcag gctgatcggc
     6361 gtagcgcgcg accgactgct caaacatatc taccagagat tgataacggt cagggttgat
     6421 ctccgtcgga acgtccgcgg gataacggtt aagccaaacc ttcttcaatt cttcacctct
     6481 aaaatgcgtg ttcgtcgtca tcgcaacccc aaatgatata catgccgtta acataatatt
     6541 aactcatcat accagcttga taattaccca acgaaaaggt tgcgaagctc gtcactattt
     6601 atttttatct ttaccgtaag aatgcagaaa cagcggacca gccgctgttt ctttttcttt
     6661 aaaaacaagc aattattcag ttacaactgt ttgtactctc gcgggaccgg gattatacca
     6721 gccccatccg ccgtagtcat agggccagcc acgaccgcca taaaaccatg gatcaatcgg
     6781 ctgaggcggc ataatcacct gctgggttaa atgccaacgt ttgtaacccg ttacttgcat
     6841 caccataaat ttatagggcg tattgccgat tttgccgtca accgcaccag tgattggccc
     6901 gactaccgta accagttgtc cacggaaatc caccgggtcc agaaaaccgt tcacatcggc
     6961 ataaatgcga ccgcgagaag gttctcccag cgtcggtctg gctccgctgt ccagcggtac
     7021 ggtagcaatt tccaggcggg ttttcccttg ctggttttgt accgcaacca ctttgccacc
     7081 aaagcgtgcc tcctgaccaa cgtacagctg cggcgcactc atcacccgaa ctaaatcttg
     7141 ttgcggcgtg ggactgctgc ctttaatggc gtccggcaca gtgacacaac cgctcagcat
     7201 tagcgcaaac gtacctgcca gtatgccttt gataacattc ttttgaaccg ccatgatgcg
     7261 actccttttt ttctcagggc atactcttaa gattcattct ttgcccggaa gtttcttcca
     7321 tgcgacgttg ttacgtaaat aaaccggttc ggcatgttcc accgccaccg ttttaccctc
     7381 ggcaaatatc tgacacgcaa tcggcagcat atcttccgtc gctggcagta aaacttctcc
     7441 gtcgcgcaaa accagcccgc tctctttacc gagatccggc caggcttgcc agcccgtccc
     7501 taccgttacc cattcgccgg aaagctgttg cattcgttca tgaacgagtt cgggtttgag
     7561 tacggcttcg gtttcttcac cgcgccagat accgttttca tcacgctgat attcggccca
     7621 gtaaacttcg cccatccgcg catcaatggc agccagcacg cgggttgcgc cgtttttgcg
     7681 ccacgcccct tgcgccattg tcattagcgt ggagacgcca atcatcggca gctctgcgcc
     7741 aagtgccagc ccttgcgcaa tgccaatacc aatgcgcacg ccggtaaagc taccggggcc
     7801 gcgcccgtaa gccagagcgt taatatcagt cagggaagtt ccgctggtgg tcaggatatc
     7861 ctgcaccatc ggtaagattc gttgagtatg ttcacgaggg caaagctcaa aatgagcgtt
     7921 gacagtaccg tcgttccaca gggcgacaga gcaggcctct gtcgcggtat cgatagccag
     7981 aattcgcatg ggtcttcgtg cttagatcaa taaaaaggcg cgcatcatac catactccgt
     8041 aacaaattac ctggaggatg gtatcgcaag gaaacgaacc gcacgggcaa tgtcacgggt
     8101 gcgcggcgcg ggcggcagac tggcgagaaa cgtcgcgccg taagggcgca tcaccagccg
     8161 attgtcacaa atcaccaaaa ccccgcgatc gtcggcgtcg cgaatcagtc gccctacccc
     8221 ctgcttgaga gtaatcaccg catccggcag ttgtacttca tcgaacgggt cgccaccgcg
     8281 caaacggcaa tcttccatgc gcgcttttaa cagcgggtca tccggtgagg taaacggcaa
     8341 cttgtcgata atcaccaatg acaatgtatc gccacgcacg tccacccctt cccagaaact
     8401 actggttgcc acaagaagcg cgttaccggc gctgacaaat tgctgcaaca gttgcccttt
     8461 gctggtttcc ccctgcaaca aaacgggaag cgtcatggta gcgcggaact gctcggccag
     8521 atcacgcatc atggcgtgcg aggtacaaag cataaaacaa cgaccgttgt tagcttcgat
     8581 gatcggtcgc agcattgccg ctaactggcg agcagaacct ggctggttgg tttgcggcag
     8641 attgcgcggc acacagagta acgcctggcg gctgtaatca aacgagcttg gcaatagcaa
     8701 cgactccgcc tgttctatcc caagccgcga ggtgaaatga tgcagatcgt cgttcaccga
     8761 cagcgttgct gaggtgaaga tccagctacc aggcttttgc gccattaact ctttgaattt
     8821 atccgccacg ctgagcggcg tgagagccag agtaaaatgg cgcgaagtgc attcgtacca
     8881 gtagctgtag cccggctgat tgatctcttt tagccgcttc agccgtgtgc gatacaacgt
     8941 agcgcgctca aatgccgcat ccagcaaggc ggaacgcccc agtgacagtt tcgccacgtc
     9001 ataacaaagt tccagggtgt catcgagcag taaaaatgcc cgctgaattt gcggattagc
     9061 taacagctca cgcaggttac ctcgataacc tggctcaccg agttgcagac gaaaatcctg
     9121 cgcactctgg gcaagacgat cagcgcactt ttgtaactgc tgggtgtctt ttaattcggt
     9181 gcggtaggcg atggtgatgt cttttgccag gtcgagcagt tgtcgactgg agagtgactg
     9241 accaaaatac tggctggcaa tgtccggtag ctggtgggct tcgtcgaaga tcatgacgtc
     9301 cgcttccggg atcagttcgc caaatccact ctctttaacc accatatccg ccagaaagag
     9361 atgatggttt accaccacca catcggcgtc catcgctttt ttacgtgctt tgaccacaaa
     9421 gcaatcttta tacatcgggc agtcgctgcc aagacagttg tcgttggtgc tggtaaccag
     9481 cggccacgcc tgtgaatctt ccgccacgct gacgcaggtg ctgatatcac catcgactgt
     9541 ttgattagac caggagcgca gcaggatcac atcgcttaag atttgtaccg gcagatcgcc
     9601 ccccgccagc gcctgctgtt cgagacgttc gaggcagagg tagtttgagc gccctttcag
     9661 cagcgccacg ttgcccgtat atttcaatgc ctttgagact gttggcaaat cgcggctgta
     9721 gagctgatcc tgcaacgctt ttgagccggt cgagataatg actttctttt tcgcccgcag
     9781 cgcaggagcc aggtaagcgt aggttttgcc cgtaccggtt cctgcttcca ccaccagcgg
     9841 ctggcctttt tctatcgcct gggtgacggc taccgccatc tgtcgctgtg gttctcgcgg
     9901 cttaaagcct ggtatcgctt tcgccagctg accgtctggt gcaaaatcgt ccgtcacact
     9961 accccctgtt gatttgaaca gggattatgt caggatgagg gcgctttcgc cagttgaagt
    10021 ggtgacggca acctcacatt gtggcagtct ttgcagcacg aaaatggaag tataatgagg
    10081 acaaaatgat gactatcgtt cgtatcgatg ctgaagcccg ctggtctgat gtagtaatcc
    10141 acaacaacac gctctactac actggtgtac cggaaaacct cgacgccgat gcttttgagc
    10201 aaaccgccaa cacgctggcg cagattgacg ccgtgctgga aaaacagggc agcaataaat
    10261 cgagcattct ggatgccacc attttcctgg ctgataaaaa cgacttcgcg gcgatgaata
    10321 aagcgtggga tgcctgggtt gtggcgggtc atgcgccggt gcgctgcacg gtgcaagcgg
    10381 ggctgatgaa cccgaagtat aaagttgaaa ttaagattgt ggctgcggtg taagctttat
    10441 cgaagcaaaa taagtcagac gataatttat cgataatact ggtcggtttt acataaatcg
    10501 accagagatt aagatattac tgttgatgct cctgctaatt cattatttat ttttataatt
    10561 tcaattttag ctataaagct aactatataa ataaacataa ccatgccgtt gtgttcgccc
    10621 ttcgattagc acctctggtt ttctttctta gctgaacaat ctggttatag cgtgcggact
    10681 gaccgttaat tttctccatc ttactggata acacaccatg agctgctacc tttaaaacac
    10741 ctgaatgtca acaggttaac tcgtgccata tcgttataat ccctttgata ttagatgcaa
    10801 attaaggtca tatatagcct tatcgataac atggttaatt ttaaggataa gaatatg
//
LOCUS       DADMHC010000135        10812 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.136, whole genome shotgun sequence.
ACCESSION   DADMHC010000135 DADMHC010000000
VERSION     DADMHC010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10812)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10812)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10812
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.136"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            213..1484
                     /locus_tag="JNZ57_002900"
     CDS             213..1484
                     /locus_tag="JNZ57_002900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HAY8829051.1"
                     /translation="MQHNTLSKHNQKLPFTRYDFGWVLLCIGMAIGAGTVLMPVQIGL
                     KGIWVFITAAIIAYPATWVVQDIYLKTLSESDSCNDYTDIISHYLGKNWGIFLGVIYF
                     LMIIHGIFIYSLSVVFDSASYLKTFGLTDADLSQSLLYKVAIFAVLVAIASGSERLLF
                     KISGPMVVVKVGIIVVFGFAMIPHWNFANITAFPQASVFFRDVLLTIPFCFFSAVFIQ
                     VLNPMNIAYRKREADKVLATRLALRTHRISYITLIAVILFFAFSFTFSISHEEAVSAF
                     EQNISALALAAQVIPGHIIHITSTVLNIFAVLTAFFGIYLGFHEAIKGIILNLLSRII
                     DTKKINSRMLTLAICAFIVITLTIWVSFRVSVLVFFQLGSPLYGIVSCLIPFFLIYKV
                     AQLEKLRGFKAWLILLYGILLCLSPLLKLIE"
     gene            complement(1514..2518)
                     /gene="dppF"
                     /locus_tag="JNZ57_002901"
     CDS             complement(1514..2518)
                     /gene="dppF"
                     /locus_tag="JNZ57_002901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP binding subunit
                     DppF"
                     /protein_id="HAY8829052.1"
                     /translation="MSTQEATLQQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFN
                     LERGKTLAVVGESGCGKSTLGRLLTMIETPTGGELYYQGQDLLKHDPQAQKLRRQKIQ
                     IVFQNPYGSLNPRKKVGQILEEPLLINTSLSKEQRREKALSMMAKVGLKTEHYDRYPH
                     MFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFI
                     SHDLSVVEHIADEVMVMYLGRCVEKGTKDQIFNNPRHPYTQALLSATPRLNPDDRRER
                     IKLSGELPSPLNPPPGCAFNARCRRRFGPCTQLQPQLKDYGGQLVACFAVDQDENPQR
                     "
     gene            complement(2515..3498)
                     /gene="dppD"
                     /locus_tag="JNZ57_002902"
     CDS             complement(2515..3498)
                     /gene="dppD"
                     /locus_tag="JNZ57_002902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HAY8829053.1"
                     /translation="MVLLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGS
                     GKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSL
                     NPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
                     RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVA
                     EAAHKIIVMYAGQVVETGDAHAIFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPG
                     KYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLDDAGRPTL"
     gene            complement(3509..4405)
                     /gene="dppC"
                     /locus_tag="JNZ57_002903"
     CDS             complement(3509..4405)
                     /gene="dppC"
                     /locus_tag="JNZ57_002903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010426221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter permease DppC"
                     /protein_id="HAY8829054.1"
                     /translation="MSQVTENKVISAPVPMTPLQEFWHYFKRNKGAVVGLVYVVIVLF
                     IAIFANWIAPYNPAEQFRDALLAPPAWQEGGSMAHLLGTDDVGRDMLSRLMYGARLSL
                     LVGCLVVVLSLIMGVILGLIAGYFGGLVDNIIMRVVDIMLALPSLLLALVAIFGPSIG
                     NAALALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGAGAMRQMFINIFPNCLAPLI
                     VQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAILL
                     TVLAFNLMGDGLRDALDPKLKQ"
     gene            complement(4415..5434)
                     /gene="dppB"
                     /locus_tag="JNZ57_002904"
     CDS             complement(4415..5434)
                     /gene="dppB"
                     /locus_tag="JNZ57_002904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter permease DppB"
                     /protein_id="HAY8829055.1"
                     /translation="MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI
                     SPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLEL
                     GVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHW
                     NLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLA
                     VIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLA
                     GAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPR
                     IRHKK"
     gene            complement(5742..7082)
                     /locus_tag="JNZ57_002905"
     CDS             complement(5742..7082)
                     /locus_tag="JNZ57_002905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001488423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HAY8829056.1"
                     /translation="MYTFHLRKGVKWHDNKEFKPTRELNADDVVFSFDRQKNAQNPYH
                     KVSGGSYEYFEGMGLPELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFASILSKEYA
                     DAMMKAGTPEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDGYWGTKPQIDTLVFSITPD
                     ASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQKKPLDDV
                     KVRQALTYAVNKDAIIKAVYQGAGVSAKNLIPPTMWGYNDDVQDYTYDPEKAKALLKE
                     AGLEKGFSIDLWAMPEQRPYNPNARRMAEMIQADWAKVGVQAKIVTYEWGEYLKRAKD
                     GEHQTVMMGWTGDNGDPDNFFATLFSCAASEQGSNYSKWCYKPFEDLIQPARATDDHN
                     KRVELYKQAQVVMHDQAPALIIAHSTVFEPVRKEVKGYVVDPLGKHHFENVSIE"
     gene            complement(7092..7322)
                     /locus_tag="JNZ57_002906"
     CDS             complement(7092..7322)
                     /locus_tag="JNZ57_002906"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829057.1"
                     /translation="MLKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTY
                     DASSVPLYNRLVEFKIGTTEVIPGLAEKWEVS"
     gene            complement(8094..8170)
                     /locus_tag="JNZ57_002907"
     tRNA            complement(8094..8170)
                     /locus_tag="JNZ57_002907"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8134..8136),aa:Pro,seq:cgg)
     gene            complement(8262..9953)
                     /gene="eptB"
                     /locus_tag="JNZ57_002908"
     CDS             complement(8262..9953)
                     /gene="eptB"
                     /locus_tag="JNZ57_002908"
                     /EC_number="2.7.8.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418002.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kdo(2)-lipid A phosphoethanolamine
                     7''-transferase"
                     /protein_id="HAY8829058.1"
                     /translation="MRYIKSITQQKLSFLLAIYIGLFMNGAVFYRRFGSYAHDFTVWK
                     GVSAVVELAATVLVTFFLLRLLSLFGRRSWRILASLVVLFSAGASYYMTFLNVVIGYG
                     IIASVMTTDIDLSKEVVGLNFILWLIAVSALPLILIWNNRCRYTLLRQLRTPGQRIRS
                     LAVVVLAGIMVWAPIRLLDIQQKKVERATGVDLPSYGGVVANSYLPSNWLSALGLYAW
                     ARVDESSDNNSLLNPAKKFTYQAPQNVDDTYVVFIIGETTRWDHMGIFGYERNTTPKL
                     AQEKNLAAFRGYSCDTATKLSLRCMFVRQGGAEDNPQRTLKEQNIFAVLKQLGFSSDL
                     YAMQSEMWFYSNTMADNIAYREQIGAEPRNRGKPVDDMLLVDEMQQSLGRNPDGKHLI
                     ILHTKGSHFNYTQRYPRSFAQWKPECIGVDSGCTKAQMINSYDNSVTYVDHFISSVID
                     QVRDKKAIVFYAADHGESINEREHLHGTPRELAPPEQFRVPMMVWMSDKYLENPANAQ
                     AFAQLKKEADMKVPRRHVELYDTIMGCLGYTSPDGGINENNNWCHIPQAKEAAAN"
     gene            complement(10206..10730)
                     /gene="lpfE"
                     /locus_tag="JNZ57_002909"
     CDS             complement(10206..10730)
                     /gene="lpfE"
                     /locus_tag="JNZ57_002909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000831418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long polar fimbrial protein LpfE"
                     /protein_id="HAY8829059.1"
                     /translation="MKRTILALCLLPLSFSSFAATTDLGPKGTLKFTLKISQGACELV
                     KDSVEVDMGTAVLKKPVRIGTEINPTPFSIGLKNCSEVVRAYVTMDGTPNADDSNLFA
                     LDAGGATGVGLKIKTAAGVQQFPENTTPTPVEFAINGDGAHQLNYIASYVPIRADATI
                     GRADATVDFTVQYE"
BASE COUNT         2597 a         2877 c         2718 g         2620 t
ORIGIN      
        1 ctttatttgc aatagttgca gttcatatcc gggctgactc cagactggta gtgaaatgcg
       61 caattttgta gaattgcgcc tcctcgcgac ctccccagtg aatctgttgc ctcatttttt
      121 acatactgcg tattcgactt ctccacctgt tgcgcaagag aaactgggtt tattcatttt
      181 tgcgaggccg acttctttct ggacaggact ttatgcagca caacacacta tcgaaacaca
      241 atcagaaatt gccgtttaca cgctacgact tcggctgggt tttattatgc ataggcatgg
      301 cgattggtgc cggaaccgtg ctgatgccag tacaaattgg cttgaaggga atttgggtat
      361 ttattaccgc agcgatcatt gcttatcctg ccacctgggt agtgcaggac atttatttaa
      421 aaaccctttc tgaaagcgat tcctgtaatg actacaccga tattatcagt cattacctgg
      481 ggaagaactg gggaattttc ctcggggtta tctacttttt gatgattatc cacgggattt
      541 ttatctactc tctctccgtg gttttcgaca gcgcctcgta cctgaaaacc ttcggtttaa
      601 ccgatgccga tctttcacaa tctctacttt ataaagtcgc tattttcgcc gtactggtag
      661 cgattgcgtc tggtagtgaa cgattactgt ttaagatttc cgggccaatg gtggtggtca
      721 aagtagggat tattgtcgtg ttcggttttg cgatgatccc gcactggaat ttcgccaata
      781 taaccgcctt cccgcaagcc tccgtctttt tccgcgatgt cctgcttaca attccatttt
      841 gcttcttttc tgcggtattt attcaggtac ttaacccaat gaatattgcc tatcgtaaac
      901 gggaagcaga taaagtactg gcaacccggc tcgcgctgcg tacccaccga attagttata
      961 tcacgctcat cgcggtgatc ctgttttttg ccttttcgtt taccttctca attagccacg
     1021 aagaagccgt ttctgccttt gaacaaaata tctcggcact ggcactggcc gcgcaggtga
     1081 tccctggaca tatcattcat atcacctcta cggtgctgaa tatctttgcc gtactgaccg
     1141 cattctttgg catttatctc ggtttccacg aggctattaa aggcattatt ctcaatctgt
     1201 taagccgaat tattgatacc aagaaaatta actcacgcat gctgactctg gcgatctgcg
     1261 cttttatcgt cattacgttg acgatttggg tttcgtttcg tgtatcggtg ctggtgttct
     1321 ttcagttggg aagcccgtta tatggcattg tgtcgtgcct cattccgttt ttcctgatct
     1381 ataaagtcgc acaactggaa aaacttcgcg gatttaaagc ctggctaatt ctgctttacg
     1441 gcattttgct atgcttgtcg ccactgttga agctgattga gtaaaccgga gcgcatggcc
     1501 ccggttttgt gagttaacgc tgcggatttt catcctgatc aacagcaaaa caagctacca
     1561 gttgaccgcc gtagtctttt agctgcggct gcaactgggt gcaggggccg aagcgccgac
     1621 gacagcgggc gttgaaggcg caacccggcg gtggattcag tgggcttggt agttcaccgc
     1681 tgagcttgat gcgctcgcgg cgatcgtccg ggttcaggcg cggcgtcgcg gaaagtagcg
     1741 cctgagtgta cggatggcgc gggttattga agatttggtc tttcgttccc ttctccacgc
     1801 agcggcccag gtacatcacc atcacttcat cagcaatgtg ctccaccacc gacaggtcgt
     1861 gggagataaa gacataagac agccccaact cctgctgcaa atccatcatc agattcagca
     1921 cctgcgcgcg cactgaaaca tccagcgcgg aaaccggttc atcggcaatc accacatccg
     1981 ggtcgagcat cagaccacgg gcgatggcga tacgctgacg ctgaccgccg gagaacatat
     2041 gcggatagcg gtcatagtgc tcggttttca ggccgacttt cgccatcatc gacagggctt
     2101 tttcccgacg ctgttctttg cttaagctgg tgttgatcag cagcggctct tcaagaattt
     2161 gcccgacttt tttacgcgga ttcagcgaac cgtaagggtt ctggaagacg atctggattt
     2221 tctgccgacg cagcttctgc gcctgcggat cgtgcttaag cagatcctgc ccctggtaat
     2281 acagctcgcc accggtgggc gtttcaatca tcgtcagcaa ccgaccgagg gtcgatttac
     2341 cgcagccaga ttcgcccact actgccagcg ttttgccacg ttcaaggtta aacgaaacgc
     2401 catccagcgc tttaaccaga cgttccggcg cgaacatgcc tttcttcacc ggataatgtt
     2461 ttttcaggtc gatagcctgc aacagcggtt gttgcagggt ggcctcttgc gtactcatag
     2521 tgtcggcctc ccggcatcat caagtgggta atggcatttg gactgacgcc cgtcagcgag
     2581 catattcagc gccggttctt cagcgcgaca tctgtcagtg gcataggggc agcgcgggtt
     2641 aagcaggcag ccgttcgggc ggtcgtactt gccgggaacg acacctggca acgacgccag
     2701 acgttctttg tcctgagcaa attctggcag cgcacgcagc aatgcctgag tatacgggtg
     2761 acgcggcgca tggaagatgg cgtgcgcatc gcccgtttcc accacctggc ctgcatacat
     2821 cacaatgatt ttatgcgcag cttccgccac cagcgccagg tcatgggtaa tcaacaccag
     2881 cgccatgttc tctttctgct gtagctccag cagtagttcg atgatttgcg cctgaatggt
     2941 cacgtccagc gcggtggtcg gctcatcggc aatcagcagt tttggtcgac aggcaatcgc
     3001 catggcgatc atcacgcgct ggctcatgcc gccggaaagc tgatgcgggt aaacatccag
     3061 acgcgaagcc ggatcgggaa taccgacctg attcagcagg tcaatcgccc gctgacggcg
     3121 ggtacttttg ttgccgccct gatgcacctt aatcgcttcc atgatctgga aacccacggt
     3181 gtagcacggg ttaaggctgg tcatcgggtc ctggaagatc atcgccactt cggcacccac
     3241 caggttgcgg cgctcttttt ctgatatacg ctgcaaatcc tgaccgttaa acaccagttt
     3301 ttccgccatt acgcggcccg gataatcaat cagccccata atcgccaggg aactgaccga
     3361 cttaccggag ccggactcac ccacaatccc aaccacttcg ccctgtttta cgctgtagct
     3421 gatgcggtct acggcgcgga acggtgcgct ttcgtcgccg aaatgcaccg ataatttatc
     3481 tacatttaat aacaccatct cgaacctctt actgcttcag tttgggatcg agcgcgtcac
     3541 gcagaccgtc acccatcagg ttaaatgcca gcaccgtcag caggatcgcc agacccggga
     3601 aggtcacgac ccaccaggcg ctttgcgcga actgcaacac gtcggagagc atggtgcccc
     3661 actccggcgt tggcggctgt gcccccatgc cgaggaaacc aagagcagcc atatcgagaa
     3721 tggcgttaga gaaaccgagc gacgcctgaa caatcagcgg cgcaaggcag ttcgggaaga
     3781 tgttaataaa catctgacgc atcgccccgg cacccgccac gcgagacgcg gtgacgtaat
     3841 cgcggttaac ttccaccagc acggcggcgc gggttaagcg cacatagtgc ggcaaggcaa
     3901 cgaaggtcag tgccagcgcg gcgttaccaa tcgacgggcc gaaaattgcc accagcgcca
     3961 gcagcagact tggcagcgcc agcatgatat cgaccacgcg cataatgatg ttatcgacca
     4021 ggccgccaaa gtaaccggcg atcaggccga gaataacgcc cataatcagc gataacacaa
     4081 ctaccagaca gccaaccagc agcgacaggc gcgcaccgta catcaggcgc gacagcatat
     4141 cacggcctac gtcatcggtg cccagcaagt gcgccatgct gccgccttcc tgccaggctg
     4201 gcggggcgag cagtgcatcg cggaactgtt ccgccgggtt atagggtgca atccagttgg
     4261 caaagatcgc gatgaacagc acgatgacga cgtaaaccag cccgacgacc gcgcctttgt
     4321 tgcgtttaaa atagtgccag aactcctgta acggggtcat cggcaccggt gcgctaatca
     4381 ctttattttc agtaacctgt gacatgatgt ccccttactt cttatgacga atacgcgggt
     4441 tcaccacgcc gtacagcaga tcgaccagca agttgacgag gataatcatc gtcgccacca
     4501 gcaatacgcc gccctgcact accggatagt cgcggcgttg cagtgcgtca atcaaccagc
     4561 gtcccagacc gggccacgag aagatggttt cggtcagaat cgcccccgcc agcaatgttc
     4621 ccacctgcag gccgataacg gtcaccaccg gcagcatcgc gttacgcagc gcatggacga
     4681 taatcacccg catgcgggtt agccctttgg cgcgcgcggt gcggatgtaa tcctcgccca
     4741 gcacttccag catcgaggag cgtgtcatac gcacaatgac cgccagcgga atagtaccca
     4801 gcacaatggc aggtaagatc atatgggcga cggcatcgat aaagttgccg tcttcacccc
     4861 agatggcggt gtcgattagc ataaaaccgg ttaacggatt ggagtcatcg aggaacacca
     4921 tatcgctcac gcgaccggag acgggcgtca ggttccagtg caccgaaacc agcatgatca
     4981 gcatcatgcc ccaccagaag atcggcatcg agtagccggt cagcgccagg ccaactgcag
     5041 tgtgatcgaa aatggaaccg cgtttaaccg cagccagcac accaaccgga ataccgactg
     5101 ccgtagcaaa aatcatcgcg cagacgccaa gttccagcgt ggcctgaaag cgcggcacga
     5161 actcttccca tactggaatt cggcttttca ttgaaatgcc tagatcgccg tgcattacgc
     5221 cccaaatgta atggagatac tgctgccaca tcggtttatc taagccgagt tcagccagca
     5281 gctgcgcgtg acgctcaggg gagatcccac gttcgcctgc catgatcatc accggatcgc
     5341 ccgggatcat gtggacaaag gcaaatgtga gaagggtaat accgataaac gtggggatga
     5401 cgagtcccaa acgtcggaga ataaactgca acataacccg gattctctat agtgacccgc
     5461 agcctggaac tgcgtgtctg tattgctcac aaatcaattc ccgcccttgt cggacagaga
     5521 atgaagtatt gctgccggat ggcgctgcac gcagaggcac agcgccaccg ggtatacaga
     5581 ttgttgacaa agtgcgcttt gtttatgccg gatgcggcgt taacgcctta tccggcctac
     5641 aaaatcgtgc aaattcaata cattgcagaa ttttcgtagg cctgataagc ggagcacatc
     5701 aggcagtttt gcctttacca tcagtcttgt atggctttta attattcgat agagacattt
     5761 tcgaagtgat gtttgcctaa tggatcaacc acatagcctt tgacttcttt gcgtaccggt
     5821 tcaaacacgg tggagtgagc gatgatcagt gccggagcct gatcgtgcat caccacctgc
     5881 gcttgcttgt acagttcaac gcgtttgtta tggtcgtcgg tagcacgcgc cggttgaatc
     5941 agatcttcaa acggtttgta gcaccatttt gagtagttag aaccttgttc agaggcggcg
     6001 cagctgaaca gggtggcgaa gaagttatcc gggtccccgt tatcgccagt ccagcccatc
     6061 attaccgtct gatgttcgcc atctttcgca cgcttgaggt actcacccca ttcgtaggtg
     6121 acgattttgg cctgcacgcc cactttcgcc cagtctgcct gaatcatctc cgccatgcgg
     6181 cgagcgttcg ggttatacgg acgttgttcc ggcatcgccc acaggtcgat ggagaaacct
     6241 ttttccagac ccgcttcttt cagcaaggct ttcgcttttt caggatcgta ggtgtaatcc
     6301 tgaacgtcgt cgttatagcc ccacatggtt ggcgggatca ggtttttcgc tgatacaccc
     6361 gcgccctgat aaaccgcttt gatgatcgcg tctttgttca ccgcgtaggt cagtgcctgg
     6421 cgaactttca cgtcatccag cggttttttc tgcacgttat acgagaggta gccgacgttc
     6481 agccccggca tttccatcag gttgatggat ttatcctgct tcatgcgagc gatatctgcc
     6541 gggttcgggt acggcatcac ctggcattca ttcttctgca atttcgcgta acgcacggaa
     6601 gcatcagggg taatagagaa gaccagcgta tcgatctgcg gtttggtgcc ccagtagcca
     6661 tcaaacgctt tgtagcggat acgggaatct ttttggtact gctgtaactg gaacggaccg
     6721 gttccgattg ggttgaggtc cagtttttcc ggtgtaccgg ctttcatcat cgcatcagca
     6781 tattcttttg acagaataga ggcgaagtcc attgccagat cagcgaggaa cggcgcttcc
     6841 gggcgagtca gtacgaactg aactgtgttg tcgtccacct ttttcacttc actgatcagc
     6901 tccggcaagc ccatgccttc gaagtattcg tagctgccgc cagagacttt atggtacggg
     6961 ttttgcgcgt ttttctgacg gtcgaacgag aacaccacgt catcggcgtt cagttcacgc
     7021 gtcggtttga attctttatt gtcgtgccac ttcacacctt tacgcagatg gaaggtatag
     7081 attttaccgt cttagctgac ttcccacttt tcagcgaggc ccggtatcac ttcagtggtg
     7141 ccgattttaa attcaaccag gcggttataa agcggtacgg aagaggcgtc ataggtggtg
     7201 ccggaggtaa acagctgcgg gttaaaccct tccggagatc cttctgagca ataaaccaga
     7261 gttttagcct gaacacttgc tgcgacggtc atagccacca ggctgagacc aagcttcagc
     7321 atccctgact ttttcaagga aatacgcatt attctgctcc aattgtgatg tttgttgttt
     7381 taaccctttg cagtgggttg tcgctgcctg accttttttg ttttttgccc ggtcgggtca
     7441 acgttatgag gtggggatgc cgtactaatt aacatcagtg taacagtgcg gatcctccat
     7501 aaaatgcccc tcgtgaccta caatctgtca acagaatgtg aaaacgtcaa tacagccaac
     7561 cgggatttac accaacggtg agaatccaca aacaaagatt aaaaaaactt caaacagcta
     7621 tttgcagcag agaaatttgt gctactccaa cataaccaga acaatcagct taatatttag
     7681 caacatttgg tgattaagtt ttatgaattt aatgaaaaaa atctgaggaa aaggtggata
     7741 tctgagcgat taataccatg aacgctaaaa cgcacagcgg aaaatgccag cgccagccat
     7801 aagtaacgca aaaaaagatt taagcaaata taaaaaaaga caatggtttc tgtcacaaat
     7861 ccgttaatgg atagtgagat atggggcgca aagttggcag gaaaatgtgt ggtgtgttgg
     7921 tcgaataagg cggtcgcgcc gcatccgaca ataagtgcgg tgccgttgcc tgatgcgacg
     7981 ctggcgcgtc ttatcaggcc tacgtcgagt cgaacctccc agcccccgga ggttctcatc
     8041 ctcatgggct tcaaatgcaa aaaagcctgc tcgctgagca ggcttttcga atttggtcgg
     8101 tgatagagga ttcgaacctc cgaccccttc gtcccgaacg aagtgcgcta ccaagctgcg
     8161 ccaatcaccg aatgcggggc gcatcttact gcgcagatac gccctcgtca atcccttaat
     8221 agcaaaatgc cttttgatcg gcgagaaagt cagcaggccg cttagttagc cgctgcctct
     8281 tttgcctgcg ggatgtgaca ccagttgttg ttttcgttaa ttccaccatc cggtgaagta
     8341 tagccaagac aacccatgat ggtatcgtac agctctacgt gacggcgtgg cactttcatg
     8401 tcggcttctt ttttcagctg cgcaaatgcc tgcgcattgg ccggattttc cagatattta
     8461 tctgacatcc agaccatcat cggtacgcgg aactgctccg gcggtgccaa ttcacgcggc
     8521 gtgccgtgca ggtgctcgcg ttcattaatt gactcaccgt ggtcagctgc gtagaacaca
     8581 atcgctttct tatcgcgaac ctgatcaatc acgctggaga taaagtgatc cacataggtc
     8641 accgagttgt cataggagtt gatcatctgc gctttggtac agccgctatc aacaccaata
     8701 cattccggct tccactgcgc gaagctacgc ggataacgct gggtgtagtt aaaatgcgaa
     8761 cctttggtat gcagaatgat cagatgctta ccatccgggt tgcgccctag cgattgctgc
     8821 atttcgtcta ccagcaacat atcatctacc ggcttgccac gattacgtgg ctccgcacca
     8881 atctgctcac gataagcaat gttgtccgcc atcgtgttgc tgtagaacca catttcgctc
     8941 tgcatagcgt agaggtcaga actgaatcct aactgcttca gaaccgcgaa aatgttctgt
     9001 tcttttaatg tgcgctgcgg attatcttcc gcgcccccct gacgtacaaa catgcaacgc
     9061 agtgagagtt tggttgcggt atcacaggag taaccacgga acgccgccag atttttctcc
     9121 tgggccagtt tcggcgtggt attacgctca tagccgaaaa tacccatatg gtcccaacgc
     9181 gtggtttcac cgatgataaa cacgacataa gtatcatcaa cgttttgtgg agcctggtat
     9241 gtaaacttct tcgccggatt aagcaatgaa ttattatcgg aagattcatc gacccgcgcc
     9301 caggcataca gccccaacgc agaaagccag tttgatggca gataagagtt cgctacgaca
     9361 ccgccataac tcggcaaatc aacgccggtc gccctctcca ctttcttctg ctggatatcc
     9421 agcaaacgaa tcggtgccca aaccataata cccgccagta cgacgaccgc caggctgcga
     9481 atacgctgcc ctggggttcg cagttgtcgg agcaaggtgt agcgacaacg gttattccag
     9541 ataaggataa gaggcaatgc actaacggcg attaaccaga gaataaagtt cagaccaaca
     9601 acttcttttg acaggtcgat atcggtggtc atgacggaag cgatgatgcc ataaccaatg
     9661 accacattaa ggaaggtcat gtaatagctg gcacctgcgg aaaagagcac caccagcgat
     9721 gccagaatac gccagctgcg gcggccaaac agcgatagaa gacgtagtaa gaagaaggtc
     9781 accagtacgg tggcggccag ttcaacaaca gcagaaacgc ctttccagac ggtaaaatcg
     9841 tgcgcatagc tgccgaagcg gcgataaaaa accgcgccat tcataaaaag gccaatatag
     9901 attgcaagca aaaagctcag cttctgctgt gtaatcgatt tgatgtatct catgcaaaca
     9961 aaccctggac aaacaggtga taacaccctg cttcgcggct tttcaggccc ggcaggggaa
    10021 aagtgcggag gtagtcagat aagtaaaatc tacacgcgcg aataagtaga ccacagcaaa
    10081 gcgaaaaagt gtggggaaag agtgtgcatg aagcacaaat ttacaaaaat gcaagtttga
    10141 aaagagactt tagcgttaca aaaagcagta aaaagggcca gttaactggc ccttaagatg
    10201 tgaaattatt cgtactgtac agtaaagtcg accgttgcat ctgcgcgacc aatagttgca
    10261 tcggcgcgaa taggcacgta gctggcgata tagttcagtt gatgtgcgcc atcaccgtta
    10321 attgcaaact caaccggtgt cggcgttgta ttttccggga actgttgtac tccagcagcg
    10381 gttttgattt tcagcccaac gcctgtagcg ccacccgcat ccagcgcaaa aagatttgag
    10441 tcgtctgcat tgggtgtacc gtccatagtc acgtaggctc tgaccacttc gctacagttt
    10501 ttcaggccga tggaaaaagg agtgggatta atttccgttc cgattcttac cggctttttg
    10561 agaaccgcgg tgcccatgtc aacctcaacg ctgtctttca ccagttcgca agcaccctgg
    10621 ctgattttaa gggtgaattt caatgttcct ttcggcccta aatccgtggt tgccgcgaat
    10681 gacgaaaagg aaagaggcag caggcataac gcaagtattg ttcgcttcat gactgttact
    10741 ccagttcgac atgtatggta gcaataccgc tataatcccc ggcagcgggt aattttccgg
    10801 tagtgctaac gg
//
LOCUS       DADMHC010000136        10812 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.137, whole genome shotgun sequence.
ACCESSION   DADMHC010000136 DADMHC010000000
VERSION     DADMHC010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10812)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10812)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10812
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.137"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(1..892)
                     /locus_tag="JNZ57_002910"
                     /pseudo
     CDS             complement(1..892)
                     /locus_tag="JNZ57_002910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310495.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
     gene            complement(1020..2981)
                     /locus_tag="JNZ57_002911"
     CDS             complement(1020..2981)
                     /locus_tag="JNZ57_002911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HAY8829060.1"
                     /translation="MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGH
                     LLEQAQPDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAG
                     DPDREGQLLVDEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCV
                     SALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVA
                     KDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIV
                     TSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCR
                     YLPEEHFAGRHAVMNAISVHAPDLLPQPVVDPDIRNRCWDDKKVDAHHAIIPTARSSE
                     INLTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLL
                     GSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ
                     DKDLKKILRATDGLGTEATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSLPEMAT
                     RPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRTPVRQFRGIVAPGSGG
                     SADKKKAAPRKRSAKKSPPADEVGSGAIA"
     gene            complement(2986..4029)
                     /gene="selD"
                     /locus_tag="JNZ57_002912"
     CDS             complement(2986..4029)
                     /gene="selD"
                     /locus_tag="JNZ57_002912"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HAY8829061.1"
                     /translation="MSENSIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLV
                     GNETRDDAAVYDLGNGTSVISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMA
                     IAILGWPINKLSPEIAREVTEGGRYACRQAGIALAGGHSIDAPEPIFGLAVTGIVPTE
                     RVKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSLLKPEHQGLATEVMCRMNIAGASFAN
                     IKGVKAMTDVTGFGLLGHLSEMCQGAGVQARVDYDAIPKLPGVEEYIKLGAVPGGTER
                     NFASYGHLMGEMPREVRDLLCDPQTSGGLLLAVMPEAENEVKATAAEFGIELTAIGEL
                     VPARGGRAMVEIR"
     gene            complement(4146..4697)
                     /locus_tag="JNZ57_002913"
     CDS             complement(4146..4697)
                     /locus_tag="JNZ57_002913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H nitroreductase"
                     /protein_id="HAY8829062.1"
                     /translation="MDALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQP
                     WHFFVIEGEGRERFSAVLEQGAIAAGSDDKAIDKARNAPFRAPLIITVVAKCEENHKV
                     PRWEQEMSAGCAVMAMQMAAVAQGFGGIWRSGALTESPVVREAFGCREQDKIVGFLYL
                     GTPQLKASTSINVPDPTLFVTYF"
     gene            4858..6714
                     /gene="sppA"
                     /locus_tag="JNZ57_002914"
     CDS             4858..6714
                     /gene="sppA"
                     /locus_tag="JNZ57_002914"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707347.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HAY8829063.1"
                     /translation="MRTLWRFIAGFFKWTWRLLNFVREMVLNLFFIFLVLVGVGIWMQ
                     VSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVN
                     TIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQY
                     YLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD
                     DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYA
                     LENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYDYALKTPADTGDSIGVVFAN
                     GAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAA
                     RAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGV
                     HTDGVSTSPLADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPEQIDKIAQ
                     GHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQWHLEYYVDEPTFFDKVMDNMSG
                     SVRAMLPDAFQAMLPAPLASVASTVKSESDKLAAFNDPQNRYAFCLTCANVR"
     gene            6881..7897
                     /gene="ansA"
                     /locus_tag="JNZ57_002915"
     CDS             6881..7897
                     /gene="ansA"
                     /locus_tag="JNZ57_002915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HAY8829064.1"
                     /translation="MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRP
                     EMPDFTIHEYTPLMDSSDMTPDDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASALS
                     FMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNR
                     TTKAHADGFDAFASPNLPPLLEAGIHIRRLNTPPAPHGEGELIVHPITPQPIGVVTIY
                     PGISADVVRNFLRQPVKALILRSYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSG
                     KVNMGGYATGNALAHAGVIGGADMTVEATLTKLHYLLSQELDTETIRKAMSQNLRGEL
                     TPDD"
     gene            7908..8549
                     /gene="pncA"
                     /locus_tag="JNZ57_002916"
     CDS             7908..8549
                     /gene="pncA"
                     /locus_tag="JNZ57_002916"
                     /EC_number="3.5.1.-"
                     /EC_number="3.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310502.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nicotinamidase/pyrazinamidase"
                     /protein_id="HAY8829065.1"
                     /translation="MPHRALLLVDLQNDFCAGGALAVPEGDSTVEVANRLIDWCQSRG
                     EAVIASQDWHPANHGSFASQHGVEPYTPGQLDGLPQTFWPDHCVQNSEGAQLHPLLNQ
                     KAIAAVFHKGENPLVDSYSAFFDNGRRQKTSLDDWLRDHEIDELIVMGLATDYCVKFT
                     VLDALQLGYKVNVITDGCRGVNIQPQDSAHAFMEMSAAGATLYTLADWEETQG"
     gene            complement(8710..8982)
                     /locus_tag="JNZ57_002917"
     CDS             complement(8710..8982)
                     /locus_tag="JNZ57_002917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707337.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeaC family protein"
                     /protein_id="HAY8829066.1"
                     /translation="MNLDDIINSMTPEVYQRLSTAVELGKWPDGVALTEEQKENCLQL
                     VMLWQARHNTEAQHMTIDTNGQMVMKSKQQLKEDFGISAKPIAMFK"
     gene            complement(9024..9437)
                     /gene="msrB"
                     /locus_tag="JNZ57_002918"
     CDS             complement(9024..9437)
                     /gene="msrB"
                     /locus_tag="JNZ57_002918"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HAY8829067.1"
                     /translation="MANKPSAEELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVY
                     HCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHL
                     GHVFPDGPQPTGERYCVNSASLRFTDGENGEEING"
     gene            9779..10774
                     /gene="gapA"
                     /locus_tag="JNZ57_002919"
     CDS             9779..10774
                     /gene="gapA"
                     /locus_tag="JNZ57_002919"
                     /EC_number="1.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HAY8829068.1"
                     /translation="MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYM
                     LKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLT
                     DETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYAGQDIVSNASCTTNCLAPLAK
                     VINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKV
                     LPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTE
                     DDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK"
BASE COUNT         2613 a         2837 c         2621 g         2741 t
ORIGIN      
        1 tgccagtaaa gaaatcccat tagactattt ttttgataat cttcttcgct ttcgaacaac
       61 tcgtgcgcct ttcgagaagc aagcattata taatgccagg ccagttcttc ttcaattgtc
      121 ccgttttgaa aagctgtgct tgatatcgag atcatccatg ataattccgc cgcccatatt
      181 agcttcgccg aggatttacc ggagcgatta ttagcgcaat cagagatata gtctgaggga
      241 aaaacagcaa atttattcaa caaggcgata acctgctctg gggcttcctc catgtttgct
      301 ttaaaggtat tggctccatg gtcgccagaa agaaaatgct ccattaaggc acaataactt
      361 tcgctatctt cgatacccca ttgattctct aaagactcgc gtcttttact tatgatatcg
      421 atcgagtcaa aaggaagcac atgatattgg aaggtatctt tgccaggttc aggctttcgc
      481 ggccagaact ccagcgtttc agaccattgc ttatgataga atcgataagg tgcgatcaat
      541 tgtagcgcct gtaacttctc gatactgagc ggctcaatac ctttagcctg ataataatgc
      601 agttgttctt ttttgcttta aaaccggccc gaacaataag ccccatcata attaatagat
      661 aaagaaaaga gcatcccgcg gtaatcaggc ctctttcatt caaaccgttg gatgttatcg
      721 ctgcgaacac aaacattaca gcgacaacac atgttaaata aaacccccac ttacaaagca
      781 gcatggcctt attttcttta atcatccgtt caaaattact attaaatatt tcccagccat
      841 taaaagaata cttctcgctc ccaggatggt tttgtaataa aacttttttc atcacattcc
      901 ctgttattac atactttaga ggcgataatt ttatccatgc aaaaaaaata tccaacgaat
      961 tttcttgatt cgctggatat ttcagaatat gactcgaata gcacgaaaga ttcactcgct
     1021 tacgctatcg ccccgcttcc gacttcatct gctggcggac tttttttcgc actacgttta
     1081 cgcggtgcag cctttttctt atcagcactg ccaccactgc ccggagccac aatgccgcga
     1141 aactgccgca ccggcgtacg tttggcttga tcaataagct gatatagcgt ccccaccagc
     1201 ggctgcataa agtcctgata gcgacactgc ttttcgctga tttgcgtcag caccgattcc
     1261 cagtgcgcgg tcatgtccgg tcgcgtcgcc atttctggca gcgaatggaa taacgctttt
     1321 ccggcgtcgg tagagtggat atagcgccct tttttggtca gaaaaccacg cttgaacagc
     1381 agttcaataa tcccggcacg ggttgcttct gtccccagac catcggtcgc acgaaggatc
     1441 tttttcagat ctttgtcctg cacaaagcgc gcgatcccgg tcatcgccga aagcagtgtt
     1501 gcatcggtaa aatggcgcgg cggctgggtt tgccgctcta ccacttcacc tttttcacac
     1561 agcaactcat cgcctttcgc caccacaggc aatggcgtac cgtcgttttc ttcatcgcgc
     1621 tctttgctgc ctaacagcgt gcgccagcct gcttcagcaa gaaaacgcgc tttagcgaca
     1681 aatttgcctt tggcaatgtc cagttcgata acacacttgc ggaacaccgc atccgggcag
     1741 aactgcatca agtactgacg ggcaatcagg ttatagacct tcgcttcgtt ctccgtcagg
     1801 ttgatctcag aactccgtgc ggtcgggatg atggcgtggt gtgcatcgac ctttttgtca
     1861 tcccaacagc ggttgcgtat atctggatct accactggtt gcggcaacag atctggtgca
     1921 tgaacgctga tggcattcat caccgcgtgg cgtccggcaa aatgttcttc tggcaaatag
     1981 cgacaatcgg aacgcggata agtgattagc ttgtgcgttt cgtacagctt ctggcagata
     2041 tcaagcacgt tctgcgcgct cagaccaaag cgttttgccg cttcaatctg caacgccgaa
     2101 agcgaaaaag gcagcggcgc ggattctgat tcccgtttat cgttatagct ggtgacaatt
     2161 gctggttgac cactaatgcg gttaaccaca tgctccgcca gtggacgatg taacaagcgc
     2221 ccttcttcat cctggtacgg ttcacacgct tcgctcggtt gccagatagc ggtaaaccgc
     2281 tcatcggcag gtgtcacgat atgtgctttg acttcaaaga agtctttcgc cacgaagttt
     2341 tcaatctctt catcgcggcg caccaccagc ccgagcacgg gtgtctgcac gcgtcccacg
     2401 gaaagtacgc cctgataacc ggcattgcga ccgagaatgg tatacgcacg ggtcatattg
     2461 atgccgtaca gccagtcggc acgcgctcgc gccagcgcag aaacgcacaa tggcacaaac
     2521 tcactgttgg accgaagacg gtcgatcgcc cgctcaaccg cctgcgggtt caggtcgttt
     2581 atcaagcaac gctgcacctg ctggcgcttt tccggtgcca gttgcagata gtccagcact
     2641 tcatccacca gcagttgccc ttcacgatcc gggtccccgg cgtgaacgat ttcgctggct
     2701 tcatgcagga agcgtttgat gacgttaagt tgtttggtca cggagggtcg gggctgtaat
     2761 tgccactttt ccgggacaat cggcaaatcc gcaagattcc agcgcgcata gcggctgtcg
     2821 taggcgtctg gctgcgcctg ctcaagcagg tgaccgatac accaggtcac cacctgacca
     2881 ttaccgcact cgataaagcc atcgcctttc cggtgcggtt tgggcaggac atcagcaatg
     2941 gcgcgcgcca gactcggttt ttcggcaata aacaaccgca ttgaattaac gaatctcaac
     3001 catggcacga ccgccgcgcg ctggcaccag ttcgccaatt gccgtcagtt caatgccaaa
     3061 ctcggcggct gtagctttga cctcattttc tgcttccggc atgaccgcca gcagcaaacc
     3121 gccagaagtt tgcggatcgc acagcaaatc gcgcacttca cgcggcattt cacccatcag
     3181 atgaccgtag ctggcaaagt tacgttcggt gccgccaggc actgcgccca acttaatgta
     3241 ctcttcaacc cccggcaatt ttgggatcgc gtcatagtca acgcgcgcct gcacacctgc
     3301 gccctgacac atttcgctca aatggcccag cagaccaaag cccgtaacgt cggtcatcgc
     3361 ttttacgcct ttgatgttgg caaaggacgc gcctgcgatg ttcatccggc acatcacttc
     3421 cgtcgctagt ccctgatgtt ctggtttcag cagtgatttt ttctcagccg tggtaagaac
     3481 gccgatcccc agcggtttcg tcaggaacag tttgcatccg gcttgtgcgg tactgttttt
     3541 cttcacccgc tcggtcggta cgatccccgt taccgccaga ccaaaaatcg gctccggcgc
     3601 atcgatggag tgaccgccag ccagcgcaat acccgcctga cggcatgcat agcgtccacc
     3661 ttcggttact tcgcgggcaa tttccgggga aagtttgtta atcggccagc cgaggatcgc
     3721 aatcgccata atcggtttgc cccccatcgc gaagatatcg ctgatggcgt tagtcgccgc
     3781 aatgcggcca aaatcgaaag gattatcaac gatcggcata aagaagtcgg tggtactgat
     3841 aacgctggtg ccattgccca gatcgtacac cgccgcatcg tcgcgggtct cattacccac
     3901 aagcaaattc ggatcaacaa acttcgcctg ctcactgtgc aggatggttt ccaacacttt
     3961 tggggaaatt ttacagccgc aaccagctcc gtggctgtat tgggtcaaac gaatcgagtt
     4021 ctcgctcatg gacatctcct gtcaatgcaa tccgggtatg gtaaccctca ttccgtgaag
     4081 tgataagtga gagtgtctga attcctgcgc ctttgctcac aatccagaca gtttcgcgac
     4141 aattatcaga aataagttac aaacagcgtc gggtccggga cgttaatcga cgtagatgct
     4201 ttcaactgcg gcgtgccgag gtagagaaaa ccgacaattt tatcctgctc acggcaaccg
     4261 aatgcttcac gcactaccgg actttcagtt aatgcgccac tgcgccagat gccgccaaat
     4321 ccctgggcaa cggctgccat ttgcatcgcc atgaccgcgc atccggcaga catttcctgt
     4381 tcccatcgcg ggactttatg attttcttcg catttcgcca ccaccgtgat gatgagcggt
     4441 gcgcggaacg gcgcattacg ggctttgtcg atagctttgt catcactacc ggcagcaatc
     4501 gccccctgtt ccagtacggc gctgaaacgc tcgcgccctt ccccttcaat cacaaaaaaa
     4561 tgccacggtt gcatggactt atggtccggc gcacgcatac ccgcacgcag gatgttttgc
     4621 agttgttcac ccgttggcgc gggttcagcc aggcgggagg cgctacggcg attgatcaat
     4681 agttcgagtg catccatttg attaactcct gtcgtgatat ttattcacaa aattaacacg
     4741 agagtggatt ttgttacagc acagtccgca attcctgctg acaagtgccg gttgggtcat
     4801 tacgataacc acatctattg cgcctgtgac aggtgtgacc ttaagttggg agaatacatg
     4861 cgaacccttt ggcgatttat tgccggattt tttaaatgga cgtggcgtct gctgaatttc
     4921 gtccgtgaaa tggtacttaa cctgttcttt attttcctcg tactggttgg tgtggggatc
     4981 tggatgcagg tcagtggtgg tgattcgaaa gaaacggcca gtcgtggcgc actgctgctg
     5041 gacatttccg gtgtgatcgt cgataaaccc gacagttctc agcggtttag taaattaagc
     5101 cgccagctgc ttggtgccag ttccgatcgt ctgcaggaaa actcactgtt tgatatcgtc
     5161 aacaccattc gccaggcgaa ggacgaccgc aatatcaccg gtatcgtgat ggatctgaaa
     5221 aacttcgcag gcggcgacca gccgtctatg cagtacatcg gcaaagccct gaaagagttt
     5281 cgtgacagcg ggaaaccggt ttatgccgtt ggcgagaact acagccaggg gcaatattat
     5341 ctcgccagtt tcgccaataa aatttggctg tcaccgcaag gcgtggttga tctgcacggt
     5401 tttgctacca acggtctgta ctacaaatcg ttgctggata agctgaaagt ttccacccat
     5461 gtgttccgcg tgggtacgta taaatctgcc gttgaaccgt ttattcgtga tgatatgtca
     5521 ccggcagccc gcgaagctga cagccgctgg attggtgagc tgtggcaaaa ctatctgaat
     5581 actgttgccg ctaaccggca gatccctgct cagcaggtat tccctggcgc gcaagggttg
     5641 cttgagggtt taaccaaaac cggtggcgat accgcgaaat atgcactgga aaacaagctg
     5701 gtcgatgcac tggcatcgag tgccgaaatc gaaaaagctc tgaccaaaga gttcggctgg
     5761 agtaagactg ataaaaatta tcgcgccatc agttattacg attacgcatt gaaaacgccg
     5821 gcagataccg gtgacagcat cggtgtcgtc ttcgctaatg gcgcaattat ggatggcgag
     5881 gaaactcagg ggaatgttgg cggtgatacc actgcggcac aaatccgcga cgctcgcctt
     5941 gacccgaaag tgaaagcgat tgtcctgcgt gttaatagcc caggcggcag cgttaccgcg
     6001 tctgaagtga ttcgcgctga actggcagca gcccgggcag cgggtaagcc tgtggttgta
     6061 tcgatgggcg gcatggcggc atctggtggt tactggattt ccacgccagc taattacatt
     6121 gtggctaacc ccagcaccct gaccggttct atcggtatct tcggcgtgat caccaccgta
     6181 gaaaatagtc tggattcgat tggtgttcat actgatggtg tctcaacttc accgctggcg
     6241 gatgtttcta tcaccagggc actgccgccg gaagcgcagc agatgatgca attaagcatt
     6301 gagaatggct ataaacgctt tatcacgctg gttgctgatg cgcgtcattc gacgccggag
     6361 caaattgata aaatcgccca gggccacgtc tggaccggtc aggatgcaaa agctaacggg
     6421 ctggtcgata gtctcgggga tttcgatgat gcggttgcca aagcagcaga gctcgcaaaa
     6481 gtgaaacagt ggcatctgga atactacgtt gatgaaccga ccttcttcga caaagtgatg
     6541 gacaacatgt ctggttctgt ccgggcaatg ttgccagatg cgttccaggc catgttacct
     6601 gcaccgcttg cctcggtagc ctctaccgtt aaaagtgaaa gcgacaagct ggccgcgttt
     6661 aacgacccac aaaaccgtta tgcgttttgc ctgacctgcg ccaacgtgcg ttaagtcttg
     6721 tactgagtgg ccgacagatc gtcggccaca ttatttttta cctcgacgaa tcctcttccc
     6781 gctgtctcgc cccatatttc cttatccgca tagtatcagg tgcgctcctc ctgcctcacg
     6841 tatatacttt tgctctttcg atatcattca tatcaatatc atgcaaaaga aatcaattta
     6901 cgtcgcctac acgggcggga ccatcgggat gcagcgttcc gagcagggtt atattccggt
     6961 gtcaggtcat ctacaacgcc aactggcgct gatgccggaa ttccatcgcc cggagatgcc
     7021 agatttcacc attcatgaat atacgccgtt gatggattct tctgatatga cgccggatga
     7081 ctggcagcat attgctgaag atattaaagc gcactatgac gactatgatg gttttgtcat
     7141 tctacacggt accgacacga tggcgtatac cgcctctgcg ctgtcgttca tgctcgagaa
     7201 tctcggtaaa ccggtcattg tgacagggtc acaaatcccg ctggctgagt tacgctctga
     7261 cggacaaatt aatctgctga atgcgttgta cgttgcggcg aattatccga tcaacgaagt
     7321 aacgctcttt ttcaataacc gattgtatcg cggcaaccgc actaccaaag cccatgccga
     7381 tggttttgat gcgtttgcct ctccaaacct tcctccgtta ctggaagctg gtatccatat
     7441 tcgtcgtttg aatacgccac ccgccccgca cggtgaaggg gaattaatcg ttcatccaat
     7501 cacgccacaa ccaattggcg tagtgacgat ttatccgggg atttctgctg atgtcgtgcg
     7561 caattttctg cgccaaccgg tgaaagcatt gattctgcgc tcctatggcg tgggtaatgc
     7621 gccacaaaac aaagccttcc tgcaggaatt acaagaagcc agcgatcgcg gtattgtggt
     7681 ggtcaacctg acacaatgta tgtccggtaa agtgaatatg ggtggttatg ccaccggtaa
     7741 cgccctcgcc catgccggcg ttattggcgg tgcagatatg actgtagaag ccacgctaac
     7801 caaactgcat tacctgctga gccaggaact ggatactgaa accattcgca aggccatgag
     7861 ccaaaacctg cgcggcgaac tgacgccgga tgattaagga gactgcaatg ccccatcgcg
     7921 ccctgttact ggtcgattta caaaatgatt tctgtgctgg tggcgcgctc gccgtaccgg
     7981 aaggtgacag tacggtggag gttgctaacc gccttattga ctggtgccag tcgcgcggag
     8041 aagcggttat cgccagccag gactggcatc cggcgaatca cggcagtttt gccagtcagc
     8101 acggtgtaga gccttatacg ccaggccaac tcgacggttt gccacaaacc ttctggccag
     8161 atcactgtgt gcagaacagt gaaggcgcac aattacatcc gttactgaac caaaaagcga
     8221 tcgcagcggt gttccataaa ggcgaaaatc ctttagttga cagttacagt gccttttttg
     8281 ataacggccg tcggcagaaa acctctctcg atgactggtt acgcgatcat gaaatcgatg
     8341 aattgatcgt tatgggcctg gctactgact attgcgtgaa gtttaccgtg ctggacgcgt
     8401 tacagttagg ttataaggtg aacgtgatta ccgatggttg tcgtggcgtg aatatccagc
     8461 cccaggacag tgcacacgcg tttatggaga tgtcagcagc tggggcaacg ctatatacgc
     8521 tggcagactg ggaagagaca caggggtaat attagttgaa ttcatctctg gcctacattt
     8581 cctcaatgac attgtaggcc agataatact tgtcagtgtt gcatttaacc tacttgcagc
     8641 taaaacacga cgtccgaaca agtatatttg ccctccctta ataacaggct taaatactag
     8701 ataactcatt cacttaaaca tagcaatagg ctttgctgag ataccaaaat cttcttttaa
     8761 ctgctgtttg ctcttcatga ccatctgacc atttgtgtca attgtcatat gctgtgcttc
     8821 ggtattatgg cgggcttgcc acagcatcac cagttgcagg caattctctt tttgttcctc
     8881 ggtcaacgca acgccatcag gccatttccc cagttcaacg gcggtcgaca aacgctggta
     8941 tacctcaggc gtcatgctgt tgataatgtc atcaagattc ataatttttc cgctcctgtg
     9001 gaataagttg ctgaatcgtt ttttcaaccg ttgatttctt cgccgttttc gccatcagtg
     9061 aagcgtaaag aagcagagtt aacacaataa cgttcgcctg ttggttgcgg cccgtcggga
     9121 aagacatgcc ccagatgggc atcacagtta ccgcaacgaa tttctatgcg ctgcattcca
     9181 tgtgacaagt ctttgatata acgaatggat tcttcactca ccggttcgta gaaactgggc
     9241 cagccacagc cggaatcata cttggtttcg gaatgaaaca gcggggcatc gcagatcaaa
     9301 cagtgatata cgccgtcacg cttgttatgc agtaaacgcc ccgtaaatgg cggctctgtc
     9361 ccatgattct gcgtcacgta aaactgcatc tcggacaaat tttttttcag ttcttctgcc
     9421 gaaggtttat tagccatttg ctcacatctc actttaatcg tgctcacatt acgtgactga
     9481 ttctaacaaa acattaacac caactggcaa aattttgtcc taaacttgat ctcgacgaaa
     9541 tggctgcacc taaatcgtga tgaaaatcac atttttatcg taattgccct ttaaaattcg
     9601 gggagccgac cccatgtggt ttcaagccca aaggaagagt gaggcgagtc agtcgcgtaa
     9661 tgcttaggca caggattgat ttgtcgcaat gattgacacg attccgcttg acgctgcgta
     9721 aggtttttgt aattttacag gcaacctttt attcactaac aaatagctgg tggaatatat
     9781 gactatcaaa gtaggtatca acggttttgg ccgtatcggt cgcattgttt tccgtgctgc
     9841 tcagaaacgt tctgacatcg agatcgttgc aatcaacgac ctgttagacg ctgattacat
     9901 ggcatacatg ctgaaatatg actccactca cggccgtttc gacggtaccg ttgaagtgaa
     9961 agacggtcat ctgatcgtta acggtaaaaa aatccgtgtt accgctgaac gtgatccggc
    10021 taacctgaaa tgggacgaag ttggtgttga cgttgtcgct gaagcaactg gtctgttcct
    10081 gactgacgaa actgctcgta aacacatcac cgctggtgcg aagaaagtgg ttatgactgg
    10141 tccgtctaaa gacaacactc cgatgttcgt taaaggcgct aacttcgaca aatatgctgg
    10201 ccaggacatc gtttccaacg cttcctgcac caccaactgc ctggctccgc tggctaaagt
    10261 tatcaacgat aacttcggca tcatcgaagg tctgatgacc accgttcacg ctactaccgc
    10321 tactcagaaa accgttgatg gcccgtctca caaagactgg cgcggcggcc gcggcgcttc
    10381 ccagaacatc atcccgtcct ctaccggtgc tgctaaagct gtaggtaaag tactgccaga
    10441 actgaatggc aaactgactg gtatggcgtt ccgcgttccg accccgaacg tatccgtagt
    10501 tgacctgacc gttcgtctgg aaaaagctgc aacttacgag cagatcaaag ctgccgttaa
    10561 agccgctgct gaaggcgaaa tgaaaggcgt tctgggctac accgaagatg acgtagtatc
    10621 taccgatttc aacggcgaag tttgcacttc cgtgttcgat gctaaagctg gtatcgctct
    10681 gaacgacaac ttcgtgaaac tggtatcctg gtacgacaac gaaaccggtt actccaacaa
    10741 agttctggac ctgatcgctc acatctccaa ataagttgag atgaaactgt gatctaaaaa
    10801 gagcgacttc gg
//
LOCUS       DADMHC010000137        10444 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.139, whole genome shotgun sequence.
ACCESSION   DADMHC010000137 DADMHC010000000
VERSION     DADMHC010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10444)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10444)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10444
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.139"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(8..1906)
                     /locus_tag="JNZ57_002920"
     CDS             complement(8..1906)
                     /locus_tag="JNZ57_002920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShET2/EspL2 family type III secretion system
                     effector toxin"
                     /protein_id="HAY8829069.1"
                     /translation="MSQNDIIIRTHYKSPHRLHIDSDIPTPSSELINQFARQLITLLD
                     TSDLSSMLSYCITQEFTANCRKISQNCYSTALFIINFATSPIHAENILITLHYKKEII
                     PLFLETTPIKANHLRSILDYIEQEQLTAEDRNHCMKLSKKSHREKTIQPTVNLNGSAC
                     FLQSPSDAIFCRHLSLQYALDSLRNGKGKVNLIKHYSSVESIQQHVPLVRDAEFRALL
                     RHPPAGSRVIASKDFGFALDIFFCRMMANNVSHMSAILYIDNHTLSVRLRIKQLVYGQ
                     LNYVVSVYDPNDTNVAVRGTHRTARGFLSLDKFISSGPDAQSWADRYVRNCAIAILPL
                     LPVGVPGAIFAGIASRMPFAPIHPSAMLLIMATGQTQQLITLFKQLPILPEKEIIEII
                     TAQNSVGTPALFLAMMNGHTDNVKIFMQEIQSLIYNHIIHEDNLVKLLQTKSANETPG
                     LYISMLYGFDETIDIFLNALTTPIAQELLNKKIVMDILAMKTRDGELGLFAAMENNHP
                     LCVTRFLSKINGIAFKYKLSKANIMDLLKGATAHGTPVLYIAMSKGNEDVVLSYISTL
                     NIFAKKYSFSQRQLFTLLAAKNHDNMSAVHIAIHHNHYKTVKTYYAAINVISQSLSFS
                     ADELKTYL"
     gene            2428..4356
                     /gene="thrS"
                     /locus_tag="JNZ57_002921"
     CDS             2428..4356
                     /gene="thrS"
                     /locus_tag="JNZ57_002921"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010245687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HAY8829070.1"
                     /translation="MPVITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGEL
                     VDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGF
                     YYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHAARETFANRGESYKVSIL
                     DENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRI
                     YGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRE
                     LEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNC
                     PGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQ
                     IRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNI
                     PFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPV
                     MIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAG
                     IRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEV
                     IEKLQQEIRSRSLKQLEE"
     gene            4360..4902
                     /gene="infC"
                     /locus_tag="JNZ57_002922"
     CDS             4360..4902
                     /gene="infC"
                     /locus_tag="JNZ57_002922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HAY8829071.1"
                     /translation="MKGGKRVQTARPNRINGEIRAQEVRLTGLEGEQLGIVSLREALE
                     KAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT
                     DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVES
                     FPTKIEGRQMIMVLAPKKKQ"
     gene            4999..5196
                     /gene="rpmI"
                     /locus_tag="JNZ57_002923"
     CDS             4999..5196
                     /gene="rpmI"
                     /locus_tag="JNZ57_002923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HAY8829072.1"
                     /translation="MPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHL
                     RPKAMVSKGDLGLVIACLPYA"
     gene            5249..5605
                     /gene="rplT"
                     /locus_tag="JNZ57_002924"
     CDS             5249..5605
                     /gene="rplT"
                     /locus_tag="JNZ57_002924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016169860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HAY8829073.1"
                     /translation="MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQ
                     YAYRDRRQRKRQFRQLWIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFD
                     KVAFTALVEKAKAALA"
     gene            5728..5772
                     /locus_tag="JNZ57_002925"
     CDS             5728..5772
                     /locus_tag="JNZ57_002925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanyl--tRNA ligase operon leader peptide"
                     /protein_id="HAY8829074.1"
                     /translation="MNAAIFRFFFYFST"
     gene            6055..7038
                     /gene="pheS"
                     /locus_tag="JNZ57_002926"
     CDS             6055..7038
                     /gene="pheS"
                     /locus_tag="JNZ57_002926"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004851795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HAY8829075.1"
                     /translation="MSHLAELVASAKAAISQASDVAALDNVRVEYLGKKGHLTLQMTT
                     LRELPPEERPAAGAVINEAKEQVQQALNARKAELESAALNARLAAETIDVSLPGRRIE
                     NGGLHPVTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWF
                     DTTRLLRTQTSGVQIRTMKAQQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDTNI
                     SFTNLKGTLHDFLRNFFEEDLQIRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVH
                     PNVLRNVGIDPEVYSGFAFGMGMERLTMLRYGVTDLRLFFENDLRFLKQFK"
     gene            7053..9440
                     /gene="pheT"
                     /locus_tag="JNZ57_002927"
     CDS             7053..9440
                     /gene="pheT"
                     /locus_tag="JNZ57_002927"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012905611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HAY8829076.1"
                     /translation="MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHG
                     VVVGEVVECAQHPNADKLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLPGD
                     FKIKAAKLRGEPSEGMLCSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEI
                     SVTPNRADCLGIIGVARDVAVLNQLPLVEPEIVPVGATIDDTLPITVEAPEACPRYLG
                     RVVKGINVKAPTPLWMKEKLRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGI
                     VVRMAKEGETLVLLDGTEAKLNADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLE
                     CAFFSPLSITGRARRHGLHTDASHRYERGVDPALQHKAMERATRLLIDICGGEAGPVI
                     DITNEATLPKRATITLRRSKLDCLIGHHIADEQVTDILRRLGCEVTEGKDEWQAVAPS
                     WRFDMEIEEDLVEEVARVYGYNNIPDEPVQASLIMGTHREADLSLKRVKTLLNDKGYQ
                     EVITYSFVDPKVQQMIHPGVEALLLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNR
                     VRIFESGLRFVPDTQAPLGIRQDLMLAGVICGNRYEEHWNLAKETVDFYDLKGDLESV
                     LDLTGKLNEVEFRAEANPALHPGQSAAIYLKGERIGFVGVVHPELERKLDLNGRTLVF
                     ELEWNKLADRVVPQAREISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNL
                     FDVYRGKGVAEGYKSLAISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLRD"
     gene            9445..9744
                     /gene="ihfA"
                     /locus_tag="JNZ57_002928"
     CDS             9445..9744
                     /gene="ihfA"
                     /locus_tag="JNZ57_002928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HAY8829077.1"
                     /translation="MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQV
                     KLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKDE"
     gene            complement(10048..10188)
                     /locus_tag="JNZ57_002929"
     CDS             complement(10048..10188)
                     /locus_tag="JNZ57_002929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000078918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hok/Gef family protein"
                     /protein_id="HAY8829078.1"
                     /translation="MSQKSLTAITFCVTAILIIWMLHGSLCEIRMSFWGAEFAAFLQC
                     KQ"
BASE COUNT         2744 a         2362 c         2662 g         2676 t
ORIGIN      
        1 tagttggtta taaatacgtc tttagttcat cagcactaaa actcaggctt tggctgatta
       61 catttatagc agcataatat gtttttacag ttttataatg attatgatga atggctatat
      121 gaacagctga catgttgtca tgatttttag cggccaacag tgtgaataac tgacgttgac
      181 taaaagaata tttttttgca aaaatattca gcgtcgatat ataagataac acgacgtctt
      241 cattaccctt gctcatggcg atgtataata caggggttcc atgtgctgta gcgcctttta
      301 ataaatccat gatgttagct ttgctcaact tgtatttaaa ggcgatgcca ttaattttag
      361 agaggaaccg tgtgacacac aaagggtgat tattttccat tgcagcaaac aaccctagtt
      421 caccatcacg tgttttcatt gctaaaatat ccatcactat ttttttgttt aaaagctctt
      481 gtgctattgg agtggttaat gcattcagaa agatatcgat tgtttcatcg aacccataca
      541 acatggagat atagagccca ggtgtttcgt tagcactttt agtttgcagt aatttaacca
      601 gattatcttc atgaatgata tgattgtata tcagtgactg aatttcttgc ataaatattt
      661 ttacgttgtc agtatgtccg ttcatcatag ccagaaataa agcaggtgta ccaacgctat
      721 tctgcgcagt tattatttca atgatttctt tttcagggag tatgggcaac tgtttgaata
      781 atgtaataag ctgttgagtc tggcctgtgg ccattattaa caacattgcc gatggatgta
      841 taggggcaaa tggcattcgt gatgcaatac ccgcgaaaat agcccctgga actcccacag
      901 gtaatagggg cagaatagca attgcacagt tgcgaacata cctgtcagcc cagctctgag
      961 catcgggacc tgaactgatg aacttatcaa gcgaaagaaa gccccgtgct gtcctgtggg
     1021 tgcctctgac ggcaacgttg gtatcgttcg ggtcgtagac ggacactaca tagtttaatt
     1081 gtccatacac taactgcttt attcgtagcc ttactgacaa agtatgattg tctatatata
     1141 aaatcgcgga catatgactg acattgtttg ccatcattcg acaaaagaaa atatctaaag
     1201 cgaagccaaa atccttactc gcgataacgc gactccctgc aggaggatgg cgaagtaatg
     1261 ctctgaactc cgcatcccgg actaagggga catgctgctg tatggattca acggaggagt
     1321 aatgtttaat caggttgact ttgccttttc catttctcaa tgaatcaagg gcgtattgca
     1381 atgacagatg gcgacaaaaa atagcgtcag aaggagattg caaaaaacat gcactaccat
     1441 tgagatttac tgttggttgt atagtttttt ctctatggct ttttttagac agtttcatac
     1501 aatggttacg atcttcggca gttaactgtt cctgctcaat ataatccagt atgcttcgca
     1561 aatggttagc cttaataggc gtggtttcca gaaataaggg aatgatttct tttttatagt
     1621 gtaatgtaat aagtatattt tctgcatgga tgggtgaagt ggcaaagtta atgataaaaa
     1681 gggcagtgga gtaacaattt tgtgatattt ttcgacagtt tgcggtaaat tcctgagtaa
     1741 tacagtatga cagcatcgaa cttaagtcag aggtatcaag tagggtgatg agttggcgcg
     1801 caaattgatt aataagctct gatgaaggcg ttggtatgtc gctatcgatg tgcaatctat
     1861 gaggagactt ataatgagtt ctgataatga tatcgttttg actcataatc tattcacctt
     1921 atatatactg gaggttttga ggatgatgat taattattat cgccagaacg aaatgtgcac
     1981 gaaaaattgc tataagaatt gtgtcacttt tatcattgtg atatgaccac ttcgtcatta
     2041 atctcatgat cgtttaaata ctaccgccaa atcacgcaac gaactttgct ggattcagtt
     2101 tatgctgctg taaatccgct cgcagtaaac ctttcagacg caccgtgatg ttatcagtgg
     2161 ttctttaagc gttttgctgg tgtactcact acaaacgaat tgcgaatcga atcaatgtga
     2221 aacggaaagg tacaatctcc ctttttttag tgttaacatc gttcaaccgg gtggaaggtg
     2281 agaggttaat gtctttcatt tgtgtacctg attgcgaacc aatttagcat ttgttggcta
     2341 gatggtttcg caatgaactg ttaataaaca aatttttctt tgtatgtgat ctttcgtgtg
     2401 ggtcaccact gcaaataagg atataaaatg cctgttataa ctcttcctga tggcagccaa
     2461 cgccattacg accacgctgt aagccccatg gatgttgcgc tggacattgg tccaggtctg
     2521 gcgaaagcct gtatcgcagg gcgcgttaat ggcgaactgg ttgatgcttg cgatctgatt
     2581 gaaaacgacg cacaactgtc gatcattacc gccaaagacg aagaaggtct ggagatcatt
     2641 cgtcactcct gtgcgcacct gttagggcat gcgattaaac aactttggcc gcataccaaa
     2701 atggcaatcg gcccggttat tgacaacggt ttttattacg acgttgatct tgaccgcacg
     2761 ttaacccagg aagatgtcga agcactcgag aagcggatgc atgagcttgc tgagaaaaac
     2821 tacgacgtca ttaagaagaa agtcagctgg cacgcagcgc gtgaaacttt cgccaaccgt
     2881 ggggagagct acaaagtctc cattcttgac gaaaacatcg cccatgatga caagccaggt
     2941 ctgtacttcc atgaagaata tgtcgatatg tgccgcggtc cgcacgtacc gaacatgcgt
     3001 ttctgccatc atttcaaact aatgaaaacg gcaggggctt actggcgtgg cgacagcaac
     3061 aacaaaatgt tgcaacgtat ttacggtacg gcgtgggcag acaaaaaagc acttaacgct
     3121 tacctgcagc gcctggaaga agccgcgaaa cgcgaccacc gtaaaatcgg taaacagctc
     3181 gacctgtacc atatgcagga agaagcgccg ggtatggtat tctggcacaa cgacggctgg
     3241 accatcttcc gtgaactgga agtgtttgtt cgttctaaac tgaaagagta ccagtatcag
     3301 gaagttaaag gtccgttcat gatggaccgt gtcctgtggg aaaaaaccgg tcactgggac
     3361 aactacaaag atgcaatgtt caccacatct tctgagaacc gtgaatactg cattaagccg
     3421 atgaactgcc cgggtcacgt acaaattttc aaccaggggc tgaagtctta tcgcgatctg
     3481 ccgctgcgta tggccgagtt tggtagctgc caccgtaacg agccgtcagg ttcgctgcat
     3541 ggcctgatgc gcgtgcgtgg atttacccaa gatgacgcgc atatcttctg tactgaagaa
     3601 caaattcgcg atgaagttaa cggatgtatc cgtttagtct atgatatgta cagcactttt
     3661 ggcttcgaga agatcgtcgt caaactctcc actcgtcctg aaaaacgtat tggcagcgac
     3721 gaaatgtggg atcgtgctga ggcggacctg gcggttgcgc tggaagaaaa caacatcccg
     3781 tttgaatatc aactgggtga aggcgctttc tacggtccga aaattgaatt taccctgtat
     3841 gactgcctcg atcgtgcatg gcagtgcggt acagtacagc tggacttctc cttgccgtct
     3901 cgtctgagcg cctcctatgt gggcgaagac aacgagcgta aggtaccggt aatgattcac
     3961 cgcgcaattc tggggtcgat ggaacgtttc atcggtatcc tgaccgaaga attcgctggt
     4021 ttcttcccga cctggcttgc gccagttcag gttgttatca tgaatattac cgattcacag
     4081 tctgaatacg ttaacgaatt gacgcaaaaa ctatcaaatg cgggcattcg tgttaaagca
     4141 gacttgagaa atgagaagat tggctttaaa atccgcgagc acactttgcg tcgcgtccca
     4201 tatatgctgg tctgtggtga taaagaggtg gaatcaggca aagttgccgt tcgcacccgc
     4261 cgtggtaaag acctgggaag catggacgta aatgaagtga tcgagaagtt gcaacaagag
     4321 attcgcagcc gcagtcttaa acaattggag gaataaggta ttaaaggcgg aaaacgagtt
     4381 caaacggcgc gccctaaccg tatcaatggc gaaattcgcg cccaggaagt tcgcttaaca
     4441 ggtctggaag gcgagcagct tggtattgtg agtctgagag aagctctgga gaaagcagaa
     4501 gaagccggag tagacttagt cgagatcagc cctaacgccg agccgccggt ttgtcgtata
     4561 atggattacg gcaaattcct ctatgaaaag agcaagtctt ctaaggaaca gaagaaaaag
     4621 caaaaagtta tccaggttaa ggaaattaaa ttccgtcctg gtacagatga aggcgactat
     4681 caggtaaaac tccgcagcct gattcgcttt ctcgaagagg gtgataaagc caaaatcacg
     4741 ctgcgtttcc gcggtcgtga gatggcgcac cagcaaatcg gtatggaagt gcttaatcgc
     4801 gtgaaagacg atttgcaaga actggcagtg gtcgaatcct tcccaacgaa gatcgaaggc
     4861 cgccagatga tcatggtgct cgctcctaag aagaaacagt aaggccttca agtagcactg
     4921 tctgtggagc cttcgggctt cacaggcttt gttcgccttt gtttcgttta ttaacaatgc
     4981 gaagtggaag ttattaaaat gccaaaaatt aagaccgtac gcggtgctgc taagcgcttc
     5041 aaaaaaaccg gtaaaggtgg ttttaagcac aagcacgcta acctgcgtca cattctgacc
     5101 aaaaaagcga ccaaacgtaa acgtcacctg cgtccgaaag ccatggtttc caaaggcgat
     5161 ctgggcctgg taatcgcgtg cctgccgtac gcataagccg ttaacgtttt taacttttta
     5221 attagaatat agatacagga gagcacatat ggctcgcgta aaacgtggtg ttattgcacg
     5281 cgcacgtcac aagaaaattt tgaaacaagc taaaggctac tacggtgcgc gttctcgcgt
     5341 ataccgcgtt gccttccagg ctgttatcaa agctggtcag tatgcttacc gtgaccgtcg
     5401 tcaacgtaag cgtcagttcc gtcaactgtg gattgcacgt atcaacgcag cagcacgtca
     5461 gaacggtatt tcttacagca aattcatcaa tggcctgaaa aaagcctctg ttgaaatcga
     5521 ccgtaagatc ctggctgata tcgcagtatt cgacaaagta gcgttcaccg ctctggttga
     5581 aaaagcgaaa gcagctctgg cataagccag ttgaaagagg gagctagtct ccctcttttc
     5641 gtttcaacgc catcaaaaca ttgactttta tcgccgtagc cttttcaata aaggtctttt
     5701 gaagagtacc aaaaggtaac gcaagcaatg aatgctgcta ttttccgctt ctttttttac
     5761 tttagcacct gaatccagga ggctagcgcg tgagaagaga aacggaaaac agcgcctgaa
     5821 agcctcccag tggaggcttt ttttgtatgc gcgttttgaa aaataaaaag ccagtctatc
     5881 aggcgtaatt gtcgcagcca gtctggatac ggccagcgcg gagaaaccgg agcgtattta
     5941 agtacgtgag aatttcgagc actgcccggg accaaaatgg caagtaaaat agcctgatgg
     6001 gataggctct aagtccaacg aaccagtgtc accactgaca caatgaggaa aaccatgtca
     6061 catctcgcag aactggttgc cagtgcgaag gcggccatta gccaggcgtc agatgttgcc
     6121 gcgttagata atgtgcgcgt cgaatatttg ggtaaaaaag ggcacttaac ccttcagatg
     6181 acgaccctgc gtgagctgcc gccagaagag cgtccggcag ctggtgcggt tatcaacgaa
     6241 gcgaaagagc aggttcagca ggcgctgaat gcgcgtaaag cggaactgga aagcgcagcg
     6301 ctgaatgcgc gtctggcggc ggaaacgatt gatgtctccc tgccaggtcg tcgcattgaa
     6361 aacggcggtc tgcatccggt tacccgtacc atcgaccgta tcgaaagttt cttcggtgag
     6421 cttggcttta ccgtggcaac cgggccggaa atcgaagacg attatcataa cttcgatgct
     6481 ctgaacattc ctggtcacca cccggcgcgc gctgaccacg acactttctg gtttgacact
     6541 acccgcctgc tgcgtaccca gacctctggc gtacagatcc gcaccatgaa agcccagcag
     6601 ccaccgattc gtatcatcgc gcctggccgc gtttatcgta acgactacga ccagactcac
     6661 acgccgatgt tccatcagat ggaaggtctg attgttgata ccaacatcag ctttaccaac
     6721 ctgaaaggca ctctgcacga tttcctgcgt aacttctttg aggaagattt gcagattcgc
     6781 ttccgtcctt cctacttccc gttcaccgag ccttctgcag aagttgacgt catgggtaaa
     6841 aacggtaaat ggctggaagt gctgggttgc gggatggtgc atccgaacgt gctgcgtaac
     6901 gttggcatcg acccggaagt ttactctggt ttcgccttcg ggatggggat ggagcgtctg
     6961 actatgttgc gttacggcgt caccgacctg cgtttattct tcgaaaacga tctgcgtttc
     7021 ctcaaacagt ttaaataagg caggaataga ttatgaaatt cagtgaactg tggttacgcg
     7081 aatgggtgaa cccggcgatt gatagcgatg cgctggcgaa tcaaatcact atggcgggcc
     7141 tggaagttga cggtgtagaa ccggttgccg gtagcttcca cggcgtggtc gttggtgaag
     7201 tggttgagtg tgcgcagcat ccgaacgctg acaaactgcg tgtgacaaaa gtgaatgtcg
     7261 gcggcgatcg cctgctggac atcgtctgtg gtgcgccaaa ctgtcgtcag ggcctgcgtg
     7321 tggcggtagc taccattggt gctgttctgc cgggtgattt caaaattaaa gcggcgaaac
     7381 tgcgtggcga accgtctgaa gggatgctgt gctccttctc tgaactggga atttctgacg
     7441 atcacagcgg cattatcgaa ctgcctgcag atgcgccgat tggcactgac atccgcgaat
     7501 acctgaaact cgatgacaac accatcgaaa tcagcgtaac gccaaaccgt gccgactgct
     7561 taggtatcat tggtgttgcg cgtgacgttg ccgtgctgaa tcagctgccg ctggttgaac
     7621 cggaaatcgt tccggttggt gcgaccatcg acgacacgtt gccgattaca gtcgaagcgc
     7681 ctgaagcctg cccgcgctat cttggccgtg tggtaaaagg cattaacgtt aaagcgccaa
     7741 ctccgctgtg gatgaaagaa aaactgcgtc gttgcgggat ccgttctatc gatgcagttg
     7801 ttgacgtcac caactatgta ctgctcgaac tgggccagcc gatgcacgct ttcgataaag
     7861 atcgcattga aggcggcatt gtggtgcgga tggcaaaaga gggcgaaacg ctggtgctgc
     7921 ttgatggcac tgaagcgaag ctgaatgctg acactctggt catcgccgac cacaacaagg
     7981 cgctggcgat gggcggcatc tttggtggcg aacactctgg cgtgaatgac gaaacgcaaa
     8041 acgtcttgct ggaatgcgct ttcttcagcc cgctgtctat caccggtcgt gctcgtcgtc
     8101 atggcctgca tactgatgcg tctcaccgtt atgagcgtgg cgttgatccg gcactgcagc
     8161 acaaagcgat ggaacgtgcg acccgtctgc tgatcgacat ctgcggtggt gaggctggtc
     8221 cggtaattga tatcaccaac gaagcaacgc tgccgaagcg tgcaaccatc actttacgtc
     8281 gtagcaaact ggattgcctg atcggccatc atattgctga tgaacaggta actgacattc
     8341 tgcgtcgtct cggctgcgaa gtgaccgaag gcaaagacga gtggcaggca gttgcgccga
     8401 gctggcgttt cgatatggag attgaagaag atctggtcga agaagtcgcg cgtgtttacg
     8461 gctacaacaa catcccggat gagccggtac aggcaagcct gattatgggt actcaccgtg
     8521 aagctgacct gtcgctcaaa cgcgtgaaaa cgctgctcaa cgacaaaggc tatcaggaag
     8581 tgatcaccta cagcttcgtt gatccgaaag tgcagcagat gatccatcca ggcgttgaag
     8641 ccttactgct gccaagcccg atctctgttg aaatgtcagc aatgcgtctt tctctgtgga
     8701 ccggcctgct ggcaaccgtg gtgtacaacc agaaccgtca gcagaaccgt gtgcgcattt
     8761 tcgaaagcgg tctgcgtttc gtaccagata ctcaggcacc gttgggcatt cgtcaggatc
     8821 tgatgttagc cggtgtgatt tgcggtaacc gttacgaaga gcactggaac ctggcaaaag
     8881 agaccgttga tttctatgat ttgaaaggcg atcttgaatc cgttctcgac ctgaccggta
     8941 aactgaatga ggttgagttc cgtgcagaag cgaatccggc actgcatccg gggcaatccg
     9001 cagcgattta tctgaaaggg gaacgtattg gttttgttgg agttgttcat cctgaactgg
     9061 aacgtaaact ggatcttaac ggtcgcactc tggtgttcga actggagtgg aacaagctcg
     9121 cagaccgcgt ggtgcctcag gcgcgcgaga tttctcgctt cccggcgaac cgtcgtgaca
     9181 tcgcggtggt ggtcgcagaa aacgttcccg cagcggatat tttatccgaa tgtaagaaag
     9241 ttggcgtaaa tcaggtagtt ggcgtaaact tatttgacgt gtaccgcggt aagggtgttg
     9301 cggaggggta taagagcctc gccataagcc tgatcctgca agataccagc cgtacactcg
     9361 aagaagagga gattgccgct accgtcgcca aatgtgtaga ggcattaaaa gagcgattcc
     9421 aggcatcatt gagggattga acctatggcg cttacaaaag ctgaaatgtc agaatatctg
     9481 tttgataagc ttgggcttag caagcgggat gccaaagaac tggttgaact gtttttcgaa
     9541 gagatccgtc gcgctctgga aaacggcgaa caggtgaaac tctctggttt tggtaacttc
     9601 gatctgcgtg ataagaatca acgcccggga cgtaacccga aaacgggcga ggatattccc
     9661 attacagcac ggcgcgtggt gaccttcaga cccgggcaga agttaaaaag ccgggtcgaa
     9721 aacgcttcgc ccaaagacga gtaatctgat ctaactaaaa aggccgctct gcggcctttt
     9781 ttctttcaat aactaattga tttataatgt tttatatctc ttcgttccac gatgcgtcca
     9841 catttagtgg ggggagggga gtaagcccgc tacattgtgg gctttgtctt atagtctgat
     9901 cactgtttca agtcggtgag gacaccaaaa agaaaccccg cagtttttac gctgcgggtt
     9961 tgttgttcat gtctgtgaga tagggtgcct tatcgacctt accctggcaa ccgattgacg
    10021 ggggattgct cccccgtcgc ggtttcctta ctgcttacac tgtaagaacg ccgcaaactc
    10081 cgctccccag aagctcatcc gtatttcgca cagcgaaccg tgcagcatcc agatgatgag
    10141 gattgccgtc acgcagaacg tgatggccgt aagcgatttt tgcgacatag cgcttgctcc
    10201 tttttcgggg aggcgctaac ctatcacttg cttagggtag acggttaggg cctcggttaa
    10261 acaaaaatgt tttccggggc ctttccacat ctggccttca ggtattccct ccgaccatca
    10321 gccgaaaggc acccgcgcgt aatctatcgc ttttttgtta ctccggcaat tctgctcgtt
    10381 aattctgagg taagggcaaa ctcatctgat tgtttcctct gtgtgaagtt ggcagttcat
    10441 gcca
//
LOCUS       DADMHC010000138        10416 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.140, whole genome shotgun sequence.
ACCESSION   DADMHC010000138 DADMHC010000000
VERSION     DADMHC010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10416)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10416)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10416
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.140"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            6..901
                     /locus_tag="JNZ57_002930"
                     /pseudo
     CDS             6..901
                     /locus_tag="JNZ57_002930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300650.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
     gene            complement(997..2040)
                     /locus_tag="JNZ57_002931"
     CDS             complement(997..2040)
                     /locus_tag="JNZ57_002931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1176 domain-containing protein"
                     /protein_id="HAY8829079.1"
                     /translation="MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWLVTCNNQNFCVAR
                     NTGDHNGLVMTLSRSAGAHTDAVLRIECGGLKSPEASEGEIAPRLLLDGEPLALSGDK
                     WRISPWLLVTDDTATITAFLQMIQEGKAITLRDGNQTISLSGLKAALLFIDAQQKRVG
                     SETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSL
                     DPLRREVNVTALTDDKALMMISCEAGAYNTIDLAWIVSRKNPLASRPVRLRLPFNNGQ
                     ETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRFRLVRYAAEPTCDNW
                     HGPDAWPTLWITR"
     gene            complement(2166..2741)
                     /gene="nudK"
                     /locus_tag="JNZ57_002932"
     CDS             complement(2166..2741)
                     /gene="nudK"
                     /locus_tag="JNZ57_002932"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose pyrophosphatase NudK"
                     /protein_id="HAY8829080.1"
                     /translation="MTQQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDR
                     GNGATILLYNAKKKTVVLIRQFRVATWVNGNESGQLIETCAGLLDNDEPEVCIRKEAI
                     EETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDNQRANAGGGVEDEDIEVLELPF
                     SQALEMIKTGEIRDGKTVLLLNYLQTSHLMD"
     gene            complement(2809..4788)
                     /gene="aegA"
                     /locus_tag="JNZ57_002933"
                     /pseudo
     CDS             complement(2809..4788)
                     /gene="aegA"
                     /locus_tag="JNZ57_002933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416963.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent uric acid utilization protein
                     AegA"
     gene            4994..6694
                     /gene="narQ"
                     /locus_tag="JNZ57_002934"
     CDS             4994..6694
                     /gene="narQ"
                     /locus_tag="JNZ57_002934"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarQ"
                     /protein_id="HAY8829081.1"
                     /translation="MIVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAIN
                     IAGSLRMQSYRLGYDLQSGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHL
                     NANWLEMNNRLSKGDLPWYQANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIG
                     IFTLVFFTLRRIRHQVVAPLNQLVTASQRIEHGQFDSPPLDTSLPNELGLLAKTFNQM
                     SSELHKLYLSLEASVEEKTRDLHEAKRRLEVLYQCSQALNTSQIDVHCFRHILQIVRD
                     NEAAEYLELNVGENWRISEGQPNPELPMQILPVTMQETVYGELHWQNSHVSSSEPLLN
                     SVSSMLGRGLYFNQAQKHFQQLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRSIP
                     EDNATAQSIMADFSLALNDAYRQLRELLTTFRLTLQQADLPSALREMLDTLQNQTSAK
                     LTLDCRLPTLALDAQMQVHLLQIIREAVLNAMKHANASEIAVSCVTAPDGNHTVYIRD
                     NGIGIGEPKEPEGHYGLNIMRERAERLGGTLTFSQPSGGGTLVSISFRSAEGEESQLM
                     "
     gene            6858..9970
                     /gene="acrD"
                     /locus_tag="JNZ57_002935"
                     /pseudo
     CDS             6858..9970
                     /gene="acrD"
                     /locus_tag="JNZ57_002935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416965.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease AcrD"
     gene            complement(10069..10128)
                     /gene="ypfM"
                     /locus_tag="JNZ57_002936"
     CDS             complement(10069..10128)
                     /gene="ypfM"
                     /locus_tag="JNZ57_002936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YpfM"
                     /protein_id="HAY8829082.1"
                     /translation="MIERELGNWKDFIEVMLRK"
BASE COUNT         2389 a         2737 c         2748 g         2542 t
ORIGIN      
        1 ggccgatgct gcctgagttg ctcggcggtt cggcggatct ggctccagca acctgaccat
       61 ctggaaaggt tctgtttcgc tgaaggaaga tccggcgggc aactacattc actacggggt
      121 gcgtgaattt ggcatgaccg ctatagccaa cggcatcgcg caccacggcg gctttgtgcc
      181 gtataccgcg acgttcctga tgtttgttga atacgcccgt aacgccgcgc ggatggcggc
      241 actgatgaaa gcgcggcaga ttatggttta tacccacgac tcaattggcc tgggcgaaga
      301 tggtccgacg caccaggctg ttgagcaact ggccagcctg cgcttaacgc caaatttcag
      361 cacctggcga ccgtgcgatc aggtggaagc ggcggtgggc tggaagctgg cggttgagcg
      421 ccacaacgga ccgacggcac tgatcctctc aaggcagaat ctggcccagg tggaacgtac
      481 gccggatcag gtaaaagaga ttgcccgtgg cggttatgtg ctgaaagaca gcggcggtaa
      541 gccagatatt attttgattg ccaccggttc agagatggaa atccccctgc aagcggcaga
      601 gaaattagcg ggagaaggtc gcaatgtacg cgtagtttcc ctgccctcga ctgatatttt
      661 cgacgcccag gatgaggaat atcgggagtc ggtgttgcct tctaacgttg cggctcgcgt
      721 ggcggtggaa gcaggtattg ccgattactg gtacaagtat gttggtttga aaggggcgat
      781 tgttgggatg acaggttatg gggaatctgc tccggcggat aagctgttcc cgttctttgg
      841 ctttaccgcc gagaatattg tggcaaaagc gcataaggtg ctgggagtga aaggtgcctg
      901 atggtgatcg ccggatgctg attgccggat gcgactctga cgcgtcttat ccggcctata
      961 gcgtcttatc cggcctacat gtccccgcca ttttgtttaa cgggtgatcc acaacgtggg
     1021 ccaggcgtct ggcccatgcc agttatcgca ggtgggttct gcggcgtaac gcaccaggcg
     1081 aaaacgctga ccgtcaaagc gccagcgcgc ctgaatgcca caatcgctta atccgcgccc
     1141 tttcgctaag gtcaccagtt cacgcgattt ctcatcaaat gttgcgttca tcagttccag
     1201 ttcattcgtc tcctgcccgt tgttgaacgg caaacgcaac cgaaccgggc gcgaggccag
     1261 cggattttta cgcgacacaa tccatgccaa atcaatggtg ttataggccc ctgcctcaca
     1321 gctaatcatc atcagcgctt tatcatcagt cagcgcagtg acattcacct cacgacgcaa
     1381 tggatcaagc gagcagcgca gaccattcat ccgccagttt ccataatcca gcaaatcgtt
     1441 gcgttcttcg agtgagagtg gcgtcggcgt tgggttaacc accgcgacct ctttcagcgc
     1501 aggcgcgggc ggtacgctga gcggcggttc gtcccctttc ttgatccacg cggtttcact
     1561 gccaacgcgc ttttgctgag catcaataaa caacaacgcc gcttttaagc cactcagcga
     1621 aatggtctga ttgccgtcgc gtaaggtgat cgccttccct tcctgaatca tctgcaaaaa
     1681 cgcggtgatg gttgccgtat catcggttac taataaccat ggtgaaatcc gccacttgtc
     1741 accacttaac gccaacggct cgccatctaa cagcagccgt ggcgctatct ccccttctga
     1801 cgcctccggc gacttcaatc cgccgcactc aatacgtaaa acggcatcgg tatgcgcccc
     1861 ggcgctgcgg ctcagggtca tcaccagtcc attatgatcg cccgtattac gcgccacgca
     1921 gaagttttgg ttattacagg tgaccagcca gtcggaaaac gcccgttgcg ctggtgccgc
     1981 ccacaccaaa gacgtcggca acaaagcgaa aaaaaagaga aggaaaatgc gatagcgcat
     2041 ggacggtacg accccagaag ttcaaacaaa cagcacaagt cgtatcttcg ttgcgcaggt
     2101 agcgcggctc aatcggattt gtcggattga gccaataata aacaacgaaa tattattgtt
     2161 atttttcagt ccattaaatg tgacgtttgc aaatagttaa gcaataacac cgtcttaccg
     2221 tcacgtatct cgccggtttt gatcatctcc agcgcctggc tgaatggcag ctcgagcact
     2281 tcaatatctt catcttcgac accgccaccg gcgttagcgc gctgattgtc actgtattcg
     2341 gcgataaaaa agtggattag ctcagtcaca ccgcctggcg acatatacag ttcaaataat
     2401 ttgcgcactt cgcccacttc atagcccgtc tcttcaatcg cttctttacg aatgcacact
     2461 tccggttcgt cgttatccag cagcccggcg caggtttcaa tcagctgccc gctttcattg
     2521 ccattaaccc aggtagcgac acggaactga cgaatcagaa ccacggtctt tttcttcgcg
     2581 ttgtacagga ggatcgtcgc accattaccg cgatcgtaaa cttcacgttt atggcggata
     2641 acttcgccat ctttgcgcgt gagatcgtag gtaatgttgt gcagggtgaa atagttatcg
     2701 gagagaattt tgtctttaat gagggtgatt tgttgcgtca taccgactcc acagcgcgaa
     2761 atgaacaatt atcttacgct gtgaagtcgg gtttgtctgc gcaggctatc agtgagattt
     2821 gactgatttt acccccagcc agtcaataat cccctgtgcc gcatgacgtc cttctgccat
     2881 tgcggtaacc accagatccg caccacgcac ggcgtcgcca ccggcgaaga ttttcggatt
     2941 ggaggtctgg taacggtact ggctttccac atccgcgatg atgcggcccc atttgtctac
     3001 cgttacaccg tgcgactcca gccacggcat cccgtgcgga ttgaagccaa acgccataat
     3061 caccgcgtcg gctggcatga caaattcact gccttccacc ggtactggac gccgacgccc
     3121 ctgggcatcc ggctcgccaa gacgcgtgcg caggaaacga atcccgcaaa cgtgaccttg
     3181 ttcattcagc tcaagcgcca ccggctggac gttaaattcg aagttggccc cctcttcgcg
     3241 ggcgttcttc acctctttct tcgagcctgg catgttagct tcatcacgac gataagcgca
     3301 ggtgacgtta ctcgcgccgt ggcgcagcgc agtacgcaca cagtccatcg cggtgtcgcc
     3361 gccgcccagt accacgacgt taagtccggc ggtattgata aacggctctt ccggtagctc
     3421 ttcgagcccc atcacctgtt tagtgttggc gatgaggaac ggcagcgcgt cataaacgcc
     3481 cggcgcatct tcattgggta aacccgcttt catggaacgg taagtgccta cgccaacgaa
     3541 gaccgcgtcg tattgttcca aaagcgaatc caaagagaca tctttaccca cttcacaatt
     3601 gagttcgaag tgaatcccca tcgcgctgaa gatttcccga cggcgtgcca gcagggattt
     3661 atccagtttg aaagaaggaa tgccgaaagt gagcaagcca ccgatttctg gatggcgatc
     3721 gtacaccgtc accgccacgc cattgcgggt cagaacatcc gcacaggcca gccctgccgg
     3781 acctgccccg ataatcgcca cccgcttgtc cactttggtg acatgactta agtcaggacg
     3841 ccaacctttc gccaacgcct gatctgaaat atagcgttca atgttgccga tagttaccgc
     3901 gccgtgctca tcgcgaatag tacaggcacc ttcacacaaa cggtcttgcg gacaaacgcg
     3961 tccggtaatt tccggcaggg tgttggtctg gtgagaaagc tcgacggcgg cgtcgatgtt
     4021 tccggctttc accagttcaa tccactgcgg aatatggtta tgcagcgggc aggtccattc
     4081 acaaacgctg tgctcgccgc acttaaggca gcgcgaggct tcccgttatg cctggtcggc
     4141 gcgaaatggc agataaattt catcaaaacc ggttttgcgc gcttcaatcg ccagtttatc
     4201 cggctcgcca cgcgcgggcg ttgcctgcat ttgttcgact ttactcatta ccggcatttc
     4261 ttgtgcagcg gtactggcat gccacggttg atgctcctga cgtgcggtgc gcaagcggcg
     4321 ggatttcgcc atgccggaga gtgcgacgtc agtgaccagt tgcagcgcgt ccgccgggca
     4381 attctcgaca caggcaggac cgttttcgcg ccctgcacaa aggtcgcatt tatgcgccgt
     4441 ggcttttact tttcctgccg cgacgggtgt caggacgatt tgcatcgtac caaacggaca
     4501 ggccaccacg caggatttac agccaataca cttttgctga ttgacctgaa tgctgtcatc
     4561 aacgtggctg attgcgccat tagggcagct acgggcgcag ggcgcatctt cacaatggtg
     4621 acaggtcact gcactacgtt gctgctgatg tttgataacc gtaattcggg gatgaaaatg
     4681 gtgttggctc aggacatgtt gctcatcatt gtgagccatg acacaggcga tttcacaagc
     4741 atgacaaccc agacattgct gactgttggc cataataaaa cgattcataa cgaccttctt
     4801 ttttggttgt aaaaacctta ttctttatat gagtgttgtt attacccgac ttacagggga
     4861 atcggcaatg ttcatgtgcc cagaataagt aactatttcg ctataaactg tggcagctca
     4921 aataatccca tcactgacta aattgcgttt cagcgaactg gaacattaat gattttttgt
     4981 ggagaagacg cgtgtgattg ttaaacgacc cgtctcggcc agtctggccc gggccttttt
     5041 ttacattgtg ctgctgtcga ttctttccac gggtatcgct ctgctaactc tggcgagcag
     5101 tttgcgcgac gctgaggcta tcaatattgc cggatcgctg cgtatgcaga gttaccgcct
     5161 gggctacgac ttgcaaagtg gcagtccaca actcaatgca catcgccagt tgtttcagca
     5221 ggcactgcat tcaccggtat taaccaatct caacgtctgg tatgtgccag aagcagtaaa
     5281 aactcgctat gcgcatctga atgccaactg gctggagatg aataatcggc tcagcaaggg
     5341 cgatttgccg tggtatcagg ccaatattaa taattatgtt aatcagatag acctgttcgt
     5401 gctggcttta cagcactacg ctgaacgcaa aatgctgctg gtggtggcga tttccctggc
     5461 tggcggtatc ggtattttca cgctggtctt ttttactttg cgccgtatac gccatcaggt
     5521 ggttgccccg ctgaatcagc tggttaccgc cagtcaacgt attgaacacg ggcagttcga
     5581 ctcgccgccg ctggatacca gtctgccgaa tgagcttggt ctgcttgcaa aaacctttaa
     5641 ccagatgtcg agcgagctgc ataaattgta cctttcgctg gaggcgtcag tagaagaaaa
     5701 gacccgcgat ctccacgagg ccaagcgtcg tctggaggtg ttgtatcaat gttcgcaggc
     5761 gctgaacaca agccagattg atgtgcattg tttccgccat attttgcaga ttgttcgcga
     5821 caatgaagcg gctgaatatc tggagttaaa tgtcggtgaa aactggcgga ttagcgaagg
     5881 gcaaccaaac ccggaattgc cgatgcagat tttaccggtg acaatgcaag agacggttta
     5941 cggcgaactg cactggcaaa atagtcacgt ttcatcatca gaaccgctgc ttaacagcgt
     6001 ttcgtcgatg ctgggacgcg gtttgtactt taatcaggcg cagaagcatt ttcagcagtt
     6061 attgttgatg gaagaacgtg caaccatcgc ccgcgaattg cacgactcgc tggctcaggt
     6121 actttcttac ttacgtatcc agttgacgtt actgaagcgt tcgataccgg aagataacgc
     6181 caccgcacaa agtatcatgg ccgatttttc cctggcgttg aatgatgctt atcggcagtt
     6241 acgcgagctg ttgactactt tccgcctgac gctgcagcag gcggatctcc cctccgcgtt
     6301 gagggaaatg ctggatacgt tacaaaatca aaccagcgcc aaactgaccc tcgactgccg
     6361 tctgccaacc cttgcgctgg atgcgcaaat gcaggtgcat ttgttgcaaa ttattcgcga
     6421 agcggtgctg aatgcgatga agcacgccaa cgccagcgaa atcgccgtca gttgcgtcac
     6481 cgcgccggac ggcaatcaca cggtttatat ccgtgataac gggattggta tcggtgaacc
     6541 gaaagaaccc gaaggtcatt atggtctgaa tatcatgcgc gaacgcgcgg aacggctggg
     6601 tgggacgctg actttttcac aaccttccgg cggcggcacg ttagtgagta ttagctttcg
     6661 ctctgcagag ggtgaggaaa gtcagttgat gtaatgcctc ctactgacca aagaatactt
     6721 gcacttaagg ttcagtataa aagggcatga taatttacat taactccttt ttttctccac
     6781 gattggctcg taccttgccg ctacagtgaa gcaagtcaag cctacaacga tacgcagaaa
     6841 cacgaggtcc tcttttaatg gcgaatttct ttattgatcg ccccattttt gcctgggtgc
     6901 tggcaatcct gttgtgtctg acagggaccc tggcgatttt ttcattgccc gttgaacaat
     6961 accccgatct cgcgccaccg aatgtgcgag tgaccgctaa ctatcccggc gcatcggccc
     7021 agacgctgga aaacaccgtg ccccaggtta tcgagcaaaa tatgaccggc ctcgataatc
     7081 tcatgtatat gtcatctcag agcagtggca ccggtcaggc atctgtcact ttaagtttta
     7141 aagcaggcac cgatccggac gaagccgtgc agcaagtaca aaaccagctg caatcagcca
     7201 tgcgaaagtt accgcaggcg gtgcaaaatc agggcgtgac ggtgcgtaaa accggcgata
     7261 ccaatattct gaccattgct ttcgtctcta ccgatggttc gatggataaa caggatattg
     7321 ccgattatgt tgccagtaat attcaggacc cgttaagccg cgtgaatggc gtcggggata
     7381 tcgatgccta tggttcgcaa tattccatgc gtatctggct ggccccggcg aaactcaaca
     7441 gtttccagat gacggctaaa gatgtcactg atgccattga gtcacagaac gcgcagattg
     7501 cggttgggca acttggtggt acaccttccg tcgataagca ggcgctcaac gccaccatta
     7561 acgcccagtc actgctgcaa acaccagaac agttccgcga tatcaccttg cgggtgaatc
     7621 aagacggctc agaggtaagg ctgggcgatg tcgccaccgt cgaaatgggg gcggagaaat
     7681 acgattatct tagccgcttc aatggtaagc cagcctccgg gctgggggta aaactggcct
     7741 ccggcgcaaa cgaaatggcg acagggagct ggtgctcaat cgtctcgacg agctggcgca
     7801 gtacttcccg cacggactgg aatacaaggt ggcgtatgaa accacctcgt ttgttaaagc
     7861 ctccattgaa gacgtggtga aaacgctgct ggaagctatc gccctggttt tcctcgttat
     7921 gtatctgttc ctgcaaaact tccgcgccac gctaataccc actatcgccg tgccggtggt
     7981 gttgatggga accttctccg tactttacgc cttcggttac agcgtcaaca ccttaaccat
     8041 gttcgcgatg gtactggcga tcggtctgct ggtggatgac gcaatcgtgg tggtggaaaa
     8101 cgtcgaacgt attatgagtg aggaaggact cactcctcgc gaagccacac gtaaatcgat
     8161 ggggcagatc cagggggcac tggtcgggat tgcgatggtg ctttcggcgg tatttgtacc
     8221 aatggccttc ttcggcggca ccaccggtgc catctatcgc cagttctcta ttaccattgt
     8281 tgcggcgatg gtgctgtcag tactggtagc gatgatcctc actccggctc tgtgtgccac
     8341 actacttaag ccactgaaaa aaggtgagca tcacgggcaa aaaggctttt ttgcctggtt
     8401 taaccagatg tttaaccgca acgccgaacg ctacgaaaaa ggggtggcga aaattctcca
     8461 ccgcagcctg cgctggattg tgatttatgt cctgctgctt ggcggcatgg tgttcctgtt
     8521 cctgcgtttg ccgacgtcgt tcttaccgct ggaagaccgt ggcatgttta ctacctcggt
     8581 acaattgccc agcggttcaa cccaacaaca gaccctgaaa gtcgttgagc aaatcgagaa
     8641 atattacttc acccatgaaa aagacaacat catgtcggtg tttgccaccg ttggttctgg
     8701 ccctgggggt aacgggcaaa acgtggcgcg aatgtttatc cgcctgaaag actggagcga
     8761 acgcgacagt aagaccggca cctcgtttgc cattatcgag cgtgcaacaa aggcgtttaa
     8821 caagattaaa gaagctcgcg ttatcgccag cagcccgcca gcaattagcg gtcttggtag
     8881 ttctgcgggt tttgatatgg agttgcagga ccacgctgga gcaggtcacg atgcgctgat
     8941 ggcagcacgt aaccagttgc tggcgctggc ggcggaaaac ccggagctaa cccgtgtgcg
     9001 ccataacggc ctcgatgaca gtccgcagtt gcagattgat atcgaccagc gtaaagctca
     9061 ggcgctgggc gttgctatcg acgatattaa cgacacactg caaaccgcct ggggttcgag
     9121 ctatgtgaat gactttatgg atcgcggtcg tgtgaagaaa gtctatgtgc aggcagctgc
     9181 gccgtatcgc atgctgccag atgacattaa tctctggtat gtccgaaata aagatggcgg
     9241 catggtgccc ttctctgctt tcgcgacctc acgctgggag actggctcgc cgcgtctgga
     9301 acgctataac ggttattctg cggttgagat tgttggggaa gccgcaccgg gggtcagtac
     9361 cggtacggcg atggatataa tggaatcgtt agtgaagcag ttgccaaacg gctttggtct
     9421 ggagtggacg gcgatgtcgt atcaggagcg gctttccggc gcgcaggctc cggcgctgta
     9481 cgccatttcc ttgctggtgg tattcctgtg tctggcggcg ttgtatgaaa gctggtcggt
     9541 gccgttctcg gtaatgctgg tcgtgccgct gggggttatc ggcgcgctgc tggcaacctg
     9601 gatgcgcggg ctggaaaacg acgtttactt ccaggtgggc ctgttaacgg tcattggttt
     9661 atcggcgaaa aacgccatcc tgatcgtcga gtttgctaac gagatgaacc aaaaaggcca
     9721 cgacctgttt gaagcgacgc tccacgcctg ccgtcagcgt ttacgcccga ttctgatgac
     9781 ctcgctggca tttatcttcg gcgtattgcc aatggcaacc agcacgggtg ccggttccgg
     9841 tggtcagcat gcggtgggta ctggcgtaat gggcgggatg atttcggcca ctattctggc
     9901 tatttacttc gtgccgctgt tctttgtact ggtgcgccgc cgcttcccgc tgaagccgcg
     9961 cccggaataa gcaataaaaa aggcgacatg ctaatgtgtc gcctttttca actttccgat
    10021 taagaacctg ctcagcgggt tcttgctgtt tgtactttgt ctcaggaatt acttacgaag
    10081 cataacttcg ataaagtctt tccagttccc cagttcacgt tcaatcataa caacctctct
    10141 tataattatg ggtattctac ggaaacaata taccgtggtg aagctaattt actcgattgc
    10201 tgcgatgact acctccgggg gacaaacctt atgtaaatac tatggtcctg cggtgataat
    10261 ttgtatgtga tacacagcaa catttcgaga tattcatacg gcatctaata ctgatttaat
    10321 tctggttaaa atacagacag ataacaagat gaatattctt aatgtttacg ttaaaaatgt
    10381 ttaatattat ttaatagttg ttaatttgaa tacttc
//
LOCUS       DADMHC010000139        10358 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.141, whole genome shotgun sequence.
ACCESSION   DADMHC010000139 DADMHC010000000
VERSION     DADMHC010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10358
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.141"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(161..1516)
                     /gene="menE"
                     /locus_tag="JNZ57_002937"
     CDS             complement(161..1516)
                     /gene="menE"
                     /locus_tag="JNZ57_002937"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HAY8829083.1"
                     /translation="MIFSDWPWRHWRQVRGEAIALRLNDEQLNWRELCARVDELATGF
                     AAQGVVEGSGVMLRAWNTPQTLLAWLALLQCGARVLPVNPQLPQPLLEELLPNLTLQY
                     ALVLEGENTFPALTSLHIQMVEGTHSALWQPTRLCSMTLTSGSTGLPKAAVHTYQAHL
                     ASAQGVLSLIPFGDHDDWLLSLPLFHVSGQGIMWRWLYAGARMTVRDKQPLEQMLAGC
                     THASLVPTQLWRLLVNRSSVSLKAVLLGGAAIPVELTEQAREQGIRCFCGYGLTEFAS
                     TVCAKEADGLADVGSPLPGREVKIVNNEVWLRAASMAEGYWRNGQLVSLVNDEGWYAT
                     RDRGEMHNGKLTIVGRLDNLLFSGGEGIQPEEVERVIAAHPAVLQVFIVPVADKEFGH
                     RPVAVVEYDQQTVDLGEWVKDKLARFQQPVRWLTLPPELKNGGIKISRQALKEWVQRQ
                     Q"
     gene            complement(1513..2475)
                     /gene="menC"
                     /locus_tag="JNZ57_002938"
     CDS             complement(1513..2475)
                     /gene="menC"
                     /locus_tag="JNZ57_002938"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HAY8829084.1"
                     /translation="MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREGEREGWGE
                     ISPLPGFSQETWEEAQSVLLAWVNNWLAGDCELPQMPSVAFGVSCALAELADTLPQAA
                     NYRAAPLCNGDPDDLILKLADMPGEKVAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRL
                     DANRAWTPLKGQQFAKYVNPDYRHRIAFLEEPCKTRDDSRAFARETGIAIAWDESLRE
                     PDFAFVAEEGVRAVVIKPTLTGSLEKVREQVQAAHALRLTAVISSSIESSLGLTQLAR
                     IAAWLTPDTIPGLDTLDLMQAQQVRRWPGSTLPVVEVDALERLL"
     gene            complement(2475..3332)
                     /gene="menB"
                     /locus_tag="JNZ57_002939"
     CDS             complement(2475..3332)
                     /gene="menB"
                     /locus_tag="JNZ57_002939"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001641973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HAY8829085.1"
                     /translation="MIYPDEAMLYAPVEWHDCSEGFEDIRYEKSTDGIAKITINRPQV
                     RNAFRPLTVKEMIQALADARYDDNVGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSG
                     VHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVG
                     SFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWC
                     REMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQP
                     DFSKFKRNP"
     gene            complement(3347..4105)
                     /gene="menH"
                     /locus_tag="JNZ57_002940"
     CDS             complement(3347..4105)
                     /gene="menH"
                     /locus_tag="JNZ57_002940"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HAY8829086.1"
                     /translation="MILHAQAKHGKPGLPWLVFLHGFSGDCHEWQEVGEAFADYSRLY
                     VDLPGHGGSAAISVDGFDDVTDLLRKTLVSYNILDFWLVGYSLGGRGAMMAACQGLAG
                     LCGVIVEGGHPGLQNAEQRAERQRSDRQWAQHFRTEPLTAVFADWYQQPVFASLNDDQ
                     RRELVALRSNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAA
                     ELAADCHVIPRAGHNAHRENPAGVIASLAQILRF"
     gene            complement(4102..5772)
                     /gene="menD"
                     /locus_tag="JNZ57_002941"
     CDS             complement(4102..5772)
                     /gene="menD"
                     /locus_tag="JNZ57_002941"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HAY8829087.1"
                     /translation="MSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAEN
                     SAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLIL
                     LTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLH
                     AGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPSLESEKQRDWFFWR
                     QKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSEL
                     QQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWL
                     ELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRISDYLPEQGQLFVGNSL
                     VVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLN
                     ALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKY
                     HRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLQAQVSHL"
     gene            complement(5861..7156)
                     /gene="menF"
                     /locus_tag="JNZ57_002942"
     CDS             complement(5861..7156)
                     /gene="menF"
                     /locus_tag="JNZ57_002942"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416768.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase MenF"
                     /protein_id="HAY8829088.1"
                     /translation="MQSLTTALENLLRHLSQEIPATPGIRVIDIPFPLKDAFDALSWL
                     ASQQTYPQFYWQQRNGDEEAAVLGAITRFTSLDQAQRFLRQHPEHADLRIWGLNAFDP
                     SQGNLLLPRLEWRRCGGKATLRLTLFSESSLQHDAIQAKEFIATLVSIKPLPGLHLTT
                     TREQHWPDKTGWTQLIELATKTIAEGELDKVVLARATDLHFASPVNAAAMMAASRRLN
                     LNCYHFYMAFDGENAFLGSSPERLWRRRDKALRTEALAGTVANHPDDKQAQQLEEWLM
                     ADDKNQRENMLVVEDICQRLQADTQTLDVLPPQVLRLRKVQHLRRCIWTSLNKADDVI
                     CLHQLQPTAAVAGLPRDLARQFIARHEPFTREWYAGSAGYLSLQQSEFCVSLRSAKIS
                     GNVVRLYAGAGIVRGSDPEQEWQEIDNKAAGLRTLLQME"
     gene            complement(7235..7540)
                     /gene="elaB"
                     /locus_tag="JNZ57_002943"
     CDS             complement(7235..7540)
                     /gene="elaB"
                     /locus_tag="JNZ57_002943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein ElaB"
                     /protein_id="HAY8829089.1"
                     /translation="MSNQFGDTRIDDDLTLLSETLEEVLRSSGDPADQKYVELKARAE
                     KALDDVKKRVSQVSDSYYYRAKQAVYRADDYVHEKPWQGIGVGAAVGLVLGLLLARR"
     gene            complement(7595..8056)
                     /locus_tag="JNZ57_002944"
     CDS             complement(7595..8056)
                     /locus_tag="JNZ57_002944"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY8829090.1"
                     /translation="MIEWQDLHHSELSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDL
                     TGNNRHILGWKNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLDT
                     CTHHWPDKPVYLGAQAHLQNFYQSFGFIPVTEVYEEDGIPHIGMAREVIQA"
     gene            8121..9038
                     /gene="rbn"
                     /locus_tag="JNZ57_002945"
     CDS             8121..9038
                     /gene="rbn"
                     /locus_tag="JNZ57_002945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease BN"
                     /protein_id="HAY8829091.1"
                     /translation="MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQ
                     HQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVE
                     TALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALN
                     AQALKAAGVPPGPLFQELKAGKTIMLEDGRQINGADYLAAPVPGKALAIFGDTGPCDA
                     ALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYD
                     DKGCQHLLRECRSIFPATELANDFTVFNV"
     gene            9226..10358
                     /gene="elaD"
                     /locus_tag="JNZ57_002946"
                     /pseudo
     CDS             9226..10358
                     /gene="elaD"
                     /locus_tag="JNZ57_002946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416772.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="deubiquitinase"
BASE COUNT         2553 a         2881 c         2505 g         2419 t
ORIGIN      
        1 tgctgcacgc ttacgtttat tgcagcacga ttttttgacc agccattcca ttgcattatc
       61 ctgtttgcta agagttttca catcaattta cagattaaca gataaactct ttatcaacgg
      121 caatggaatg gcagaaatga gaagtgaaac ggagggttaa ttattgctga cgttgcaccc
      181 actcttttag cgcctgacgt gaaattttaa taccgccgtt tttcagctcc ggcggtaaag
      241 tcagccagcg caccggttgt tgaaaacgag ccagcttatc tttcacccat tcgccaagat
      301 caacggtttg ctggtcatac tccaccaccg ctaccggccg atgaccaaac tccttgtcgg
      361 caacgggaac gataaacacc tgcaaaaccg caggatgtgc agcaataaca cgctcgactt
      421 cttccggctg aataccctca ccgccactga ataacagatt gtctaaacgt ccgacaatgg
      481 tcagcttgcc attatgcatc tcaccgcgat cgcgcgtagc gtaccagcct tcgtcattaa
      541 ccagtgaaac cagttgcccg ttacgccagt aaccttctgc catactggca gcccgcagcc
      601 acacttcatt attaacgatt ttcacttccc gacccggcag cggcgaacca acgtctgcca
      661 ggccgtcggc ttctttcgca cataccgtgg aggcaaactc ggtcagacca tagccgcaaa
      721 agcaacgaat cccctgctcg cgcgcctgtt ccgtcaactc gaccgggata gccgcgccgc
      781 caagtaacac cgctttcagg gaaacggaac tgcggttaac cagcaaacgc cagagttgtg
      841 ttggcaccag tgaagcgtga gtacagcctg ccagcatttg ctccaatggc tgtttatcac
      901 gcaccgtcat ccgcgcacca gcgtataacc agcgccacat aattccctga ccggagacgt
      961 gaaacagcgg taaagagagc aaccagtcat cgtgatcgcc aaacggaatc agcgataaca
     1021 caccttgcgc actggcaaga tgggcctgat aagtatggac agcggctttc ggtaaaccgg
     1081 tggagccgga ggtcaatgtc attgaacaaa gacgtgttgg ttgccacaga gctgaatgtg
     1141 tgccttcaac catctgaata tgcagtgaag ttaacgccgg gaaagtattt tctccttcca
     1201 gcaccagcgc atattgcagt gtaagatttg gcagtaattc ctcaagcaac ggttgcggaa
     1261 gctgtggatt tacgggcagc acccgcgccc cgcattgcag taacgccagc caggcgagca
     1321 gcgtttgcgg cgtattccac gcccgcaaca tcacgccgct gccctcaacc acaccctgcg
     1381 ccgcaaagcc cgtagctaac tcatcgacgc gagcacaaag ctcgcgccag ttgagttgct
     1441 cgtcattaag acgtaaggcg atggcttctc cccgcacttg ccgccagtga cgccacggcc
     1501 agtcagagaa gatcataaca accgctccag tgcatcaact tccacgacag gcagcgtgct
     1561 acccggccag cgacgtacct gctgcgcctg catcagatcc agcgtgtcca gccctggaat
     1621 ggtgtccggc gttaaccagg cggcaatccg cgccagttgc gttaagccta agctcgactc
     1681 aatagaagaa ctgatcaccg ccgtcagcct caacgcgtgc gccgcctgta cctgctcgcg
     1741 tactttttcc agactgcccg tgagcgtggg tttgataact accgcgcgca cgccctcttc
     1801 agccacaaag gcaaaatccg gctcgcgcag gctttcatcc caggcaatgg caatgcctgt
     1861 ttcacgggca aacgctcgcg aatcatcgcg ggttttgcac ggctcttcga gaaacgcgat
     1921 gcggtggcga taatccgggt taacatattt ggcaaactgc tgacctttca gcggtgtcca
     1981 ggcgcgattt gcgtcaagac gcaaatgcag atccggaatt gcctccagca acagattaac
     2041 caccatgccg tcgcgcacgg cttcgtacaa tcccactttg accttcgcca ctttctcgcc
     2101 tggcatatca gcaagtttga ggatcagatc gtcaggatcg ccattacaca gtggtgccgc
     2161 acggtaattg gccgcctgcg ggagcgtatc tgccagctcc gccaatgcac agcttacgcc
     2221 aaaggcaacg gaaggcatct gcggtagctc gcaatcgcct gccagccagt tatttaccca
     2281 ggcaagcagc acgctttgcg cctcttccca ggtttcctgg ctgaagcccg gcagtgggga
     2341 gatctccccc cacccttcgc gctcgccctc acgcaggcaa acgtacagcc cgtcgcgggt
     2401 ttttaaccgc ctgtcgcgca gaaccacccc cgcgtccatg gggatctgcc agcggtatac
     2461 ctgcgcgcta cgcattacgg attccgttta aatttgctga aatcaggctg acgtttctgg
     2521 ttgaaagcgt tgcgaccttc ctgaccttct tccgtcatgt agaacagcat ggtggcgttg
     2581 cccgccagct cctgcagccc cgcctgcccg tcacagtcgg cgttcagtgc agctttcagg
     2641 cagcgcagcg ccatcggact gttttgcagc atttcgcggc accagcgaac ggtttctttt
     2701 tccagatccg ccagcggtac cacggtgttg acaaggccca tatccagcgc ctgtttcgcg
     2761 tcgtactgac ggcacaggaa ccagatttcc cgcgcttttt tctgtccgac gatgcgagcc
     2821 atgtaggaag cgccccagcc gccgtcgaag gaaccgactt tcgggccagt ctgaccgaag
     2881 atggcattat ctgccgcgat agtcaggtcg cacatcatgt gcagaacgtg accgccgccg
     2941 atggagtagc cagccaccat cgcgacaacc ggtttcggac aggtacggat ctgacgctgg
     3001 aagtccagca cgttcaggtg atgtacgccg gaatcatctt tatagccgcc gtaatcacca
     3061 cgcactttct ggtcaccgcc ggagcagaac gctttatcac ctgcgccagt cagaatgatc
     3121 acgccgacgt tgtcgtcata acgcgcatct gccagtgcct ggatcatctc ttttaccgtc
     3181 agaggacgga aggcattgcg cacctgcgga cgattaatgg tgatttttgc gataccatcg
     3241 gtggattttt cataacgaat gtcctcgaaa ccttcggagc agtcgtgcca ttcaaccggt
     3301 gcgtaaagca ttgcttcatc aggataaatc atattgtgtc ctttagtcag aaacgcaaga
     3361 tctgcgccag acttgcgatt acgccagcgg gattttcccg atgcgcgtta tgtccggcgc
     3421 gaggaatgac atggcagtcg gcagccagtt ccgccgccag ggcgcggaat ttgctgtcac
     3481 gttcaccaca taaataataa aacgcaaatg tgcgggcgct aaggttagca cgtaaatcag
     3541 gctggacggc gagagaagtc gcctccagca tggcggcaag ggttgcgcca ttattgttgc
     3601 tgcgcagcgc caccagctcc cggcgttgat cgtcattgag cgaggcaaaa acaggctgtt
     3661 gataccagtc ggcaaatacc gccgttaacg gttctgtgcg aaaatgctgc gcccattggc
     3721 gatcggaacg ctgacgttcc gcacgttgtt cagcattttg cagccccgga tgcccgcctt
     3781 cgacaataac cccacaaagc cccgccagcc cctggcaagc cgccatcatc gccccccgtc
     3841 cgccaagcga gtaccccacc agccagaagt caaggatgtt gtaactaacc aaggttttac
     3901 gcagtaagtc ggtgacatca tcaaatccat cgacgctaat cgccgccgaa ccaccatgac
     3961 ctgggagatc aacatacaac cgtgagtagt cggcaaacgc ctcgcccact tcttgccatt
     4021 cgtggcaatc gccggaaaaa ccgtgcaaaa acaccagcca gggtaaacct ggttttccgt
     4081 gttttgcctg cgcgtgcagg atcataaatg gcttacctgc gcctgaagtt gctggagcgt
     4141 ttgcgcacca tcggtgtcgt taaccaccat ttcaatcacc gtggtggttg gcgtgcgcca
     4201 ggcgtcggca aatgccgttt caagttcctg ccagttttgc ggacgatgat atttcagctc
     4261 gaacatcgcg gcggcgtgct caaaatggac gttttgcggc atcagataga aacgctcacg
     4321 ctcgctttgc ggcgttggca acagcgagaa aatttgcccg ccgttgttgt tcaccacaat
     4381 taataccagc ggcgcagaaa cctgacgcaa taacgccagc gcgttgagat cgtaaagtgc
     4441 ggagagatcg cccacaatcg ccagcgtcgg tttgccgctt gcccgctgaa cgcctgcggc
     4501 ggtcgaaagc agtccgtcga taccgctggc ccctcggttg ctgtacaccg ggtaacctgc
     4561 cggaagttgc gaaagcgcat caatcagacg taccaccagg ctgttaccga caaacaattg
     4621 cccctgttca ggcagatagt cgctgatgcg atgcgccagt tgcgcttcgc caaacgcatc
     4681 gcgacgggca ataaccgcct gcattgcctg ttccgccagg cgcgggattt caacgcacca
     4741 gggctggcgt ttttctgccg gatgcagctc cagccagtcg gcaatattgg caattaagcg
     4801 gcgtccacga tggtgcgccg gatcaagccg cccttcgatg tcatccacaa tccagtactc
     4861 ttcgggttca cagcttgcct gccattgcag gagccgtttg cccgtcaggc tgcttcccag
     4921 ttgcaccaca atttgcgcct gctgcagctc gctggtcgct ttggcattgc ctaaccaaag
     4981 atcggcacac ggcagcggct gcccggtttg tgacagcaca tcgccaatca gcggccagcc
     5041 aagagtttgc gcccacaggg caactttttt gccctcttcc gcactcatgc gcccggcaac
     5101 caccacgccg cgcttttgtc gccagaagaa ccagtcgcgc tgtttttcac tttccagact
     5161 aggcgcttca cgcagccacg gtttgtcgtc ctgccaccag tcacccagac gctgttgcca
     5221 gctaagcccg gtatcgtcca tttcgccata cagcggttca gcaaacgggc agttgatatg
     5281 gactcccccc gcatgaagcg taccgagagc gtggtcgatg gtagaaacca gccaacgtgc
     5341 ggggatatcc tgggtcgggc gcggcaatga aatactgtgc gtggggtgag aggcgaacat
     5401 tcccggctgg cgaattgcct gattcgcgcc gcagtcaatt agctccggcg ggcgatcggc
     5461 ggttaagaga atcagttttt ctccggttaa cccggcttca atcagtgccg gatagagatt
     5521 tgccaccgcc gtgccggagg tcacaatcac cgccaccggc tgcttgctga ctttcgccag
     5581 ccccagcgcc agatgcccca acccacgctc atcgaaatgg gtgtggtgaa tgaatgcgga
     5641 attctccgcc gccgctaacg ttaacggtgt agaacgcgag cctggggcga tacagatgtg
     5701 tctgacgccg tgacgcgtta atgcttccag aatgaccgcc gcccagcgtc ggttaaatgc
     5761 gcttactgac atgagtttgt ccggtatcaa tattgcggct aagtataagg agctacaaaa
     5821 atagattatt gatatgaatc ggtaatgatg cgactcatta ctattccatt tgtaataaag
     5881 tacgcaaccc tgccgctttg ttgtcgattt cctgccactc ttgctcgggg tcggaaccac
     5941 ggacaatgcc cgcgccagca tataatcgca cgacattgcc gctaattttt gctgagcgca
     6001 gggaaacgca gaattcgctt tgttgtaatg agagatagcc cgcagaaccg gcgtaccatt
     6061 ctcgggtgaa cggttcgtga cgggcgataa actgtcgcgc cagatcgcgc ggtaagccag
     6121 caactgctgc cgttggctgc aactgatgta aacagatcac atcatccgct ttgttgagtg
     6181 aagtccagat acagcggcga agatgctgca ctttacgcag acgcagtacc tgcggcggta
     6241 aaacatccag cgtctgggta tcggcctgta atcgttggca gatatcttcc accaccagca
     6301 tgttctcgcg ctggttttta tcatccgcca tcagccactc ttctaactgc tgcgcctgct
     6361 tatcatcagg atgatttgct actgttcccg ccagcgcttc agtacgcagc gctttgtcac
     6421 gccgccgcca taaccgttcc ggtgaagagc caagaaaagc attttcgcca tcaaaggcca
     6481 tgtaaaaatg gtagcaattc agattcagtc gacgactggc agccatcatc gccgccgcgt
     6541 tgaccggact tgcgaaatgc aggtcagttg cccgagcgag caccactttg tcgagctcac
     6601 cttcggcgat ggttttcgtt gccagttcga ttaattgcgt ccagcccgtt ttgtccggcc
     6661 agtgttgttc tcgcgtggtg gttaaatgta acccaggcaa gggcttgata ctcaccagtg
     6721 tggcgataaa ttcttttgcc tgaatcgcat cgtgctgaag ggagctttcg ctgaatagcg
     6781 tcagccgcag cgtggcttta ccgccacagc gtcgccattc caagcggggt aaaagtaaat
     6841 tgccctgcga cgggtcaaaa gcattcagcc cccaaatgcg taagtcggcg tgttccgggt
     6901 gctggcgaag aaaacgttgt gcctggtcca acgacgtaaa acgggtaatc gcgcccagga
     6961 cggcagcttc ttcatcacca ttacgttgtt gccagtagaa ttgcgggtac gtttgctgac
     7021 tggccagcca gctcaaggca tcaaaagcgt ctttgagagg gaaaggaata tcgataaccc
     7081 gaatgccggg tgtcgccgga atctcttgcg acaaatggcg cagtagattt tccagcgccg
     7141 tagtaagtga ttgcacgcgg acctctccct gttaaaagcc tcacattata cggggtacta
     7201 caaaaaaaat gcagtacccc ggtgtaggga ggttttaacg gcgtgccagc aacagtccta
     7261 gtaccagccc aacggccgcg cccacaccaa ttccttgcca aggtttttcg tggacgtagt
     7321 catcagcacg ataaacagcc tgcttcgccc gatagtaata actgtctgaa acctggctaa
     7381 cccgtttttt cacatcatcc agcgcttttt ctgcacgcgc tttcagctca acatatttct
     7441 gatcagcggg atcgccagag gagcggagca cctcttccag tgtttcacta agcagcgtca
     7501 ggtcgtcatc gatacgtgta tcaccaaact gattagacat tctcgttctc catttgcgta
     7561 aaacctgtca ctaactatag acaagggttg ttgattacgc ctgaattacc tcgcgtgcca
     7621 tcccaatgtg tgggatacca tcttcttcat agacctccgt cacagggata aaaccgaaac
     7681 tctggtagaa gttttgcaga tgcgcctgcg ccccgaggta aacaggctta tcaggccagt
     7741 gatgcgtgca ggtgtcgagg gttttactca tcagttgctg ccccactttt tcgccacgca
     7801 acgcttcact gacaatcacc cgaccaataa cgaccggctc aagatcatca tcacttttca
     7861 gaatcctcgc atatgccacc agttcatcat ttttccaacc gagaatatgg cgattattcc
     7921 ccgtcaaatc atcaccatcg atatcctgat aagggcaatt ctgctcgaca acaaacaccg
     7981 cgcaacgcag ttgtaataag gcataaagct gggaaaccga taattcagag tgatgcagat
     8041 cttgccattc aatcataatg ctctcctttt agatgtatgc cttatactag ccggaatatt
     8101 ttttgaaacg tgatgaactc atggaattaa tttttttagg tacttcagcc ggtgtgccaa
     8161 cccgcacgcg caatgtcacg gcaatattgc ttaacctgca acatccgacc cagagcggac
     8221 tttggttgtt tgactgcggt gaaggcaccc agcatcagct actgcatacc gcctttaacc
     8281 ctggaaaact ggacaagatt tttatcagtc accttcatgg cgatcatctt tttggtttac
     8341 ccggcttgct gtgcagtcgt tctatgtcag gcattatcca acccttaacg atttatggtc
     8401 cgcaaggtat ccgtgaattt gtggaaaccg cgctgcggat tagcggctca tggaccgatt
     8461 atccgctgga aattgtcgaa attggcgctg gcgaaattct cgatgatggc ctgcgcaaag
     8521 taaccgctta tccgctggaa cacccactgg aatgttatgg ctatcgtatt gaagaacatg
     8581 ataaaccggg tgcattaaat gcccaggcat taaaagctgc tggcgtgccg cctggcccac
     8641 tgtttcagga attaaaagcg ggcaaaacaa tcatgctgga agatggaagg cagattaacg
     8701 gcgcagatta cttagctgct ccagtgccag gtaaagcgct cgctattttc ggcgataccg
     8761 gcccctgcga tgccgcactt gacctggcta aaggtgtcga tgtcatggtg cacgaagcga
     8821 cgctggatat aaccatggaa gccaaagcca atagtcgcgg ccatagctct acacgccagg
     8881 ctgcgacact agcccgtgag gctggagtcg gtaagctaat cattacccac gtcagctcgc
     8941 gctatgatga caaaggttgt cagcacctgt tacgtgaatg caggtcaatt ttcccggcga
     9001 ctgaactagc gaatgatttc accgtgttta acgtttaact ctgcttatta ttaaaaacag
     9061 ggcgaaactt gccctgttat cgcaacccgc gctacatata tccacccaca cgggcatatt
     9121 gagcgatttt tgatatttat tcatctcctt acgcactata ttcagagcaa taagttgcct
     9181 ctttttatct tcattcagca caacctttgc aactaaaagg agcccatgat ggttacagtt
     9241 gtcagcaatt attgtcaatt atctcaaacc caactcagtc agacatttgc agaaaaattt
     9301 actgggaccg aggaattact gcagtcttta aaaaaacagc gttatccgga gatgaagaaa
     9361 gtattgagtt actgcataat attgcgttag gttatgatga atttggaaaa aaagctgaag
     9421 atattcttta ccatattgtt agaaacccaa caaatgagac cctatcgatt atccgactta
     9481 ttaaaaatgc ctgtttaaaa ttatataatt tggcacatac cgcaaccaac tcccacctta
     9541 aaccaactgg tccggataat tcagatgttc tcctattcaa aaagctattc tccccttcga
     9601 aattaatgac aattatcggt gatgaaattc ctcttatatc tgaaaaacag tcgctttcaa
     9661 aggtgctttt aaatgatgag aataatgaac tgagtgatgg tacaaacttc tgggataaaa
     9721 atcgtcaatt aaccacagat gaaatagctt gctatcttca gaagatcgcc gctaatgcaa
     9781 aaaatactca agtcaattat cctactggtc tctacgtccc ctactccacc agaactcacc
     9841 tggaagacgc tctcaatgaa aatattaaga gcgatccatc atggccgaat gaagtccagt
     9901 tattccccat aaatactggc ggacactgga tattagtttc gctacagaaa atagtaaata
     9961 aaaaaataat aaactacaaa taaaatgtgt catattcaac tcattgcgtg cactaggcca
    10021 tgataaagaa aattcactta agcgtgtcat taatagtttt aattctgaac tcatgggaga
    10081 aatgtcgaat aataatataa aagttcattt aaatgaacca gagataatat ttttacatgc
    10141 cgatcttcag caatacttaa gccaaagttg cggtgcgttt gtgtgcatgg cagcccagga
    10201 agtgattgaa caaagggaaa gcaattctga cagcgccccc tatacgttat taaaaaacta
    10261 tgctgacaga tttaaaaaat attcagcaga agagcagtgc aaaattgatt ttcaacatcg
    10321 actggtaaac aggaattgtt atttagataa atatggcg
//
LOCUS       DADMHC010000140        10325 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.142, whole genome shotgun sequence.
ACCESSION   DADMHC010000140 DADMHC010000000
VERSION     DADMHC010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10325)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10325)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10325
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.142"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            592..789
                     /locus_tag="JNZ57_002947"
     CDS             592..789
                     /locus_tag="JNZ57_002947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829092.1"
                     /translation="MEITPQQLVEFTIPDGRGQQARTLPDMLSSDAGPLSYPLIYSSK
                     VMIISLFDSTVMPDKYRHNGK"
     gene            complement(739..1932)
                     /locus_tag="JNZ57_002948"
     CDS             complement(739..1932)
                     /locus_tag="JNZ57_002948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8829093.1"
                     /translation="MSPGIEDTPQKTLSCWPLAFSAGLLGIGQNGLLVVLPVLVIQTN
                     LSLSVWAALLMLGSMLFLPSSPWWGKQISRTGSKPVVLWALGGYGISFTLLGLGSVLM
                     ATSAITTAVGLGILIIARIAYGLTVSAMVPACQVWALQRAGEGNRMAALATISSGLSC
                     GRLFGPLCAAAMLAIHPLAPLGLLMAAPVLALLMLLRLPGTPPQPTPECKSVSLKRDC
                     LPYLLCAILLAAAVSMMQLGLSPALTRQFVTDTTAISQQVAWLLGLSAVAALIAQFGV
                     VRPQRLTPVALLLSAGVLMSGGLAIMLSEQLWLFYPGCAVLSFGAALATPAYQLLLND
                     KLADGAGAGWLATSHTLGYGLCALLVPLVSKTGVAIALIMAALFATILFTIVSVFIWH
                     YRTIK"
     gene            2068..3792
                     /gene="iucA"
                     /locus_tag="JNZ57_002949"
     CDS             2068..3792
                     /gene="iucA"
                     /locus_tag="JNZ57_002949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001314127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobactin synthase IucA"
                     /protein_id="HAY8829094.1"
                     /translation="MTLPSEKPATDVAAQCFLNALIRETTDWKLTEYPPDELLIPLDE
                     QKSLHFRVTYFSPTQHHRFAFPARLVTASGSYPVDFTTLSRLIIDKLRHQLFLPVPLC
                     ETFHQRVLESHVHTQQAIDARHDWAALREKALNFGEAEQALLTGHAFHPAPKSHEPFN
                     RREAERYLPDMAPHFPLRWFSVDKTQIAGESLHLNLQQRLTRFAAENAPQLLNELSDN
                     QWLFPLHPWQGEYLLQQGWCQALVAKGLIKDLGEAGTSWLPTTSSRSLYCATSRDMIK
                     FSLSVRLTNSIRTLSVKEVKRGMRLARLAQTDGWQMLQVRFPTFRVMQEDGWAGLLDL
                     NGNIMQESLFALRENLLVDQPKSQTNVLVSLTQAAPDGGDSLLVSAVKRLSDRLGITV
                     QQAAHAWVDAYCQQVLKPLFTAEADYGLVLLAHQQNILVQMLGDLPVGFIYRDCQGSA
                     FMPHATDWLDSIGEAQAENIFTHEQLLRYFPYYLLVNSTFAVTAALGAAGLDSESNLM
                     ARVRASLAEVRDQVTHKTCLNYVLESPYWNVKGNFFCYLNDHNENTIVDPSVIYFDFA
                     NPLQAQEV"
     gene            3793..4740
                     /gene="iucB"
                     /locus_tag="JNZ57_002950"
     CDS             3793..4740
                     /gene="iucB"
                     /locus_tag="JNZ57_002950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N(6)-hydroxylysine O-acetyltransferase"
                     /protein_id="HAY8829095.1"
                     /translation="MSEANIIHSRYGLRCEKLDKPLNLGWGLDNSAVLHCPGELPTGW
                     LCDALDQIFIAAPQLSAVALPWAEWREEPQALTLFGQVKSDIIHRTAFWQLPLWLSSP
                     ANRASGEMVFDAEREIYFPQRPPRPQGEVYRRYDPRIRRMLSFRIADPVSDAERFTRW
                     MNDPRVEYFWEQSGSLEVQTAYLERQLTGKHAFPLIGCFDDRPFSYFEIYWAAEDRIG
                     RHYSWQPFDRGLHLLVGEQQWRGAHYVQSWLRGLTHYLLLDEPRTQRTVLEPRTDNQR
                     LFRHLEPAGYRTIKEFDFPHKRSRMVMADRHHFFTEVGL"
     gene            4740..6482
                     /gene="iucC"
                     /locus_tag="JNZ57_002951"
     CDS             4740..6482
                     /gene="iucC"
                     /locus_tag="JNZ57_002951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobactin synthase IucC"
                     /protein_id="HAY8829096.1"
                     /translation="MNHKDWDFVNRRLVAKMLSEMEYEQVFHAESQGDDHYCINLPGA
                     QWRFIAERGIWGWLWIDAQTLRCTDEPVLAQTLLMQLKPVLSMSDATVAEHMQDLYAT
                     LLGDLQLLKARRGLSASDLINLDADRLQCLLSGHPKFVFNKGRRGWGKEALERYAPEY
                     TNTFRLHWLAVKREHMIWRCDNDLDIQQLLTAAMDPQEFTRFSQVWQENGLDHNWLPL
                     PVHPWQWQQKIATDFIADFVEGRMVSLGEFGDQWLAQQSLRTLTNASRRGGLDIKLPL
                     TIYNTSCYRGIPGRYIAAGPLASRWLQQVFATDATLVQSGAVILGEPAAGYVSHEGYA
                     ALARAPYRYQEMLGVIWRENPCRWLKPDESPVLMATLMECDENNQPLAGAYIDRSGLD
                     AETWLTQLFRVVVVPLYHLLCRYGVALIAHGQNITLAMKEGVPQRVLLKDFQGDMRLV
                     KEAFPEMDSLPQEVRDATSRLSADYLIHDLQTGHFVTVLRFISPLMVRLGVPERRFYQ
                     LLAAVLSDYMNKHPQMAERFAIFSLFRPQIIRVVLNPVKLTWPDLDGGSRMLPNYLEN
                     LQNPLWLVTQEYES"
     gene            6479..7816
                     /gene="iucD"
                     /locus_tag="JNZ57_002952"
     CDS             6479..7816
                     /gene="iucD"
                     /locus_tag="JNZ57_002952"
                     /EC_number="1.14.13.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent L-lysine N(6)-monooxygenase"
                     /protein_id="HAY8829097.1"
                     /translation="MKKSVDFIGVGTGPFNLSIAALSHQIEELNCLFFDEHPHFSWHP
                     GMLVPDCHMQTVFLKDLVSAVAPTNPYSFVNYLVKHKKFYRFLTSRLRTVSREEFSDY
                     LRWAAEDMNNLYFSHTVENIDFDKKSRLFLVQTSRGEYFARNICLGTGKQPYLPPCVK
                     HVTQSCFHASEMNLRRPDLSGKRITVVGGGQSGADLFLNALRGEWGEAAEINWVSRRN
                     NFNALDEAAFADEYFTPEYISGFSGLKEDIRHQLLDEQKMTSDGITADSLLTIYRELY
                     HRFEVLRKPRNIRLLPSRSVTTLESSGPGWRLLMEHHLDQGRESLESDVVIFATGYRS
                     ALPQILPSLMPLITMHDKNTFKVRDDFTLEWSGPKENNIFAVNASMQTHGIAEPQLSL
                     MAWRSARILNRVLGRDLFDLSMPPALIQWRSGSRKKPQPEAASLTHYTANIQE"
     gene            7822..10017
                     /gene="iutA"
                     /locus_tag="JNZ57_002953"
     CDS             7822..10017
                     /gene="iutA"
                     /locus_tag="JNZ57_002953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709458.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric aerobactin receptor IutA"
                     /protein_id="HAY8829098.1"
                     /translation="MRKKYMPRALGPLLLVVLSPAVAQQNDDNEIIVSASRSNRTVAE
                     MAQTTWVIENAELEQQIQGGKELKDALAQLIPGLDVSSQSRTNYGMNMRGRPLVVLID
                     GVRLNSSRSDSRQLDSVDPFNIDHIEVISGATALYGGGSTGGLINIVTKKGQPETMME
                     FEAGTKSGFNSSKDHDERIAGAVSGGNDHISGRLSVAYQKFGGWFDGNGDATLLDNTQ
                     TGLQHSNRLDIMGTGTLNIDESRQLQLITQYYKSQGDDNYGLNLGKGFSAISGSSTPY
                     VSKGLNSDRIPGTERHLISLQYSDSDFLGQELVGQVYYRDESLRYYPFPTVNANKQAT
                     AFSSSQQDTDQYGMKLTLNSQLMDGWQITWGLDAEHERFTSNQMFFDLAQASASGGLN
                     NHKIYTTGRYPSYDITNLAAFLQSSYDINDIFTVSGGVRYQYTENRVDDFIDYTQQQK
                     IAAGKAISADAIPGGSVDYDNFLFNAGLLMHITERQQAWFNFSQGVALPDPGKYYGRG
                     IYGAAVNGHLSLTKSVNVSDSKLEGVKVDSYELGWRFTGDNLRTQIAAYYSLSNKSVE
                     RNKDLTISVKDDRRRIYGVEGAVDYLIPDTDWSTGVNFNVLKTESKVNGQWQKYDVKE
                     SSPSKATAYINWAPEPWSLRVQSTTSFDVSDAEGNDINGYTTVDFISSWQLPVGTLSF
                     SVENLFDRDYTTVWGQRAPLYYSPGYGPASLYDYKGRGRTFGLNYSVLF"
BASE COUNT         2533 a         2627 c         2713 g         2452 t
ORIGIN      
        1 gaaacaaagg cagcttatcg ttgtttttca aacgataaag tctctgctaa taaaattatg
       61 gctcctcaca aagaaaatat cactgaaaga gctcagcagt ttaaaagagt tttagtttta
      121 caggatacaa cagaacttaa ttattctggt cagaaagaaa aacaaggagt tggtcacaaa
      181 aaacataaag atgaaagaaa cttatttctt catcctcaac tcgtcatcag tgagtcaggt
      241 gtttgcctcg gtgtttatga tgactatcag tggttcaggg atgaattaaa aaccagtaaa
      301 aatacccgac aagaaatctg caatgattta cttcataaaa aacatgtcag tgaaaaagaa
      361 acctggcgtt gggttgaagg atataataaa gcaacagaac tggctcgcca atgccctgat
      421 acccatgtat tgtcaatttc tgatcgtgaa ggcgattttt atgacctgtt tgaacgcgca
      481 gagcagactc ccggaataaa agctgactgg cttgtcagaa tgaaatttaa taacagagca
      541 acgctgaata ttaatggtaa acgggatcat aggttgttgc acgaaagaat catggagatt
      601 acaccgcagc aactggttga attcactata cctgatgggc gggggcagca agccagaaca
      661 ctgcctgaca tgctttcatc agacgcaggt cctctctcat atcctctgat ttactccagt
      721 aaggtgatga tcatatcttt atttgatagt acggtaatgc cagataaata cagacacaat
      781 ggtaaataat atagttgcaa ataatgctgc cataatcagc gcgattgcga cacctgtttt
      841 cgataccagc ggcaccagca aagcgcacag tccatagcca agtgtgtgac tggtagcgag
      901 ccagcccgcg cctgcgccat cagccagctt atcattcagt agaagttgat aagcgggtgt
      961 tgccagagct gctccaaatg acagcactgc acagcccggg taaaacaacc atagctgttc
     1021 ggagagcatg atagccagac caccactcat caacactccg gcactcagga gcagggccac
     1081 cggagtcagg cgctgcggac ggactacccc gaactgcgcg ataagcgcag ctactgcgga
     1141 cagacccaac agccaggcca cctgttggct aatggcggtg gtatccgtga cgaactggcg
     1201 agtaagggca ggcgaaagtc caagctgcat catgctcacc gccgcagcca gtaatattgc
     1261 gcaaagcaga taaggcagac aatcccgctt cagactgacg ctcttgcact ccggtgtggg
     1321 ctgtggtggt gtgccgggca accgcagcag catcagcagc gccagcactg gtgctgccat
     1381 cagtagcccc agtggcgcca gaggatgaat ggccagcatt gctgccgcgc acagcggccc
     1441 gaatagcctg ccgcaactca ggccggagct gatggttgcc agagcggcca tgcgattccc
     1501 ttctccagct ctctgcaatg cccagacctg acaggctggc accattgccg acacggtcag
     1561 cccgtaggcg atccgggcga tgattaatat tcccagtccc accgctgttg ttatggcgct
     1621 ggtagccatc agcacgcttc ccagccctag cagggtaaag cttatgccat atcctcccag
     1681 agcccacaac accacaggtt tactgccagt acgggaaatt tgctttcccc accacgggga
     1741 cgatggcaga aacagcattg agccaagcat cagcagggca gcccatacag acagactcag
     1801 atttgtctgt atgaccagaa cagggagcac aaccagcaga ccgttctgtc cgataccgag
     1861 aagcccggca ctgaacgcaa gtggccagca ggacagtgtt ttttggggcg tatcttcgat
     1921 ccctggtgac attataatgt ttcaactcca tgtattaatt gtgtttattt gtaaaattaa
     1981 tttatctgac aataacattt attgttgata atgagaatca ttatcgacat aattgttatt
     2041 attttactgt gtgggagctg tttgactatg accctgccct ctgaaaaacc agccacagat
     2101 gtggctgcgc agtgcttcct gaatgcactg attcgtgaaa ccacagactg gaaactgaca
     2161 gaatacccgc cagacgaatt gctcatcccg ctggatgagc agaaatcgct ccatttcaga
     2221 gtgacttatt tctccccaac ccagcatcac cgctttgcat ttcctgcacg tctggtcacg
     2281 gcatcaggca gttatcctgt cgactttacc actctctccc ggcttattat tgataagcta
     2341 cgccatcaac tgtttctgcc cgttcccctc tgcgaaactt tccaccagcg cgtgctggaa
     2401 agccatgtcc atacgcaaca ggcaattgat gcccgtcatg actgggccgc tctgcgtgaa
     2461 aaagcgttga attttggcga ggctgagcag gcgctgctga caggacacgc tttccaccct
     2521 gcgcctaagt ctcatgaacc gtttaaccgg cgggaggctg aacgctacct gcctgatatg
     2581 gcaccccact tcccactgcg gtggttttcg gtggataaaa cacaaatcgc cggtgaaagt
     2641 ttgcatctca accttcaaca gcggctgacg cgatttgccg cagagaatgc gcctcagtta
     2701 ctcaacgaat taagtgacaa ccaatggctg ttcccgttgc acccgtggca gggggaatat
     2761 cttttgcagc aggggtggtg ccaggcactt gttgctaaag ggctgattaa agacttaggt
     2821 gaggccggca cgtcgtggct gccgaccacc tcttcccgtt ccctctactg tgccaccagc
     2881 cgcgatatga tcaagttctc cctgagcgta cggctgacca actccatccg tactctgtcc
     2941 gtgaaagaag tgaagcgtgg gatgcgcctg gcacgcctgg ctcaaaccga cggctggcag
     3001 atgctacagg tccgcttccc gactttccgg gtaatgcagg aggatggctg ggccgggctg
     3061 ctcgatctta acggcaacat catgcaggaa agtctgtttg ccctgcgtga aaatctgctg
     3121 gtggatcagc cgaaaagcca gactaacgta ctggtctccc tgactcaggc cgcacctgat
     3181 ggcggtgatt cgctgctggt ttcggcggta aaacgcctga gcgatcgcct cggtatcact
     3241 gtgcaacagg ccgcccatgc atgggtcgat gcatactgtc agcaagtgct aaagccgctg
     3301 tttacggctg aagcggatta cggcctggtg ctgctggcgc atcagcaaaa tattcttgtc
     3361 cagatgcttg gggatctgcc ggtcggattt atttaccgtg actgtcaggg cagcgctttt
     3421 atgcctcacg cgacagactg gctcgattct attggcgagg cgcaggcgga aaatattttc
     3481 acccatgagc agttgctgcg ctatttccct tattacctgc tggttaactc cacttttgct
     3541 gtgaccgctg cgctgggggc tgccgggctg gacagcgaat cgaatctgat ggctcgtgta
     3601 cgagcatcgc tggctgaagt gcgtgatcag gtgactcata aaacctgtct caactacgtg
     3661 ctggaaagtc cgtactggaa cgtaaaaggt aactttttct gttatctgaa cgatcataac
     3721 gagaacacca ttgttgatcc ttcggtgatc tatttcgatt tcgctaaccc gctgcaggct
     3781 caggaggtct gaatgtctga ggcaaacatt attcacagca gatatggact gcgctgtgaa
     3841 aaactcgaca agcccctgaa tcttggctgg ggactggaca atagcgcggt gttgcactgt
     3901 cccggggagc tgccgacagg gtggctgtgc gatgcgctgg atcagatatt tatcgccgca
     3961 ccacaactgt cagcagtggc tctcccctgg gccgaatggc gtgaggagcc acaggcgctg
     4021 acgctttttg ggcaggtaaa aagcgacatt atccatcgta ctgccttctg gcagttaccg
     4081 ttatggttga gttcaccggc aaaccgggcc tccggtgaaa tggtttttga tgcagagcgt
     4141 gagatttatt tcccgcagcg cccaccccgt ccacagggtg aggtttaccg ccgttacgat
     4201 ccacgtattc gcaggatgct gagtttccgc attgccgatc ccgtttctga tgcagaacgt
     4261 ttcacccgct ggatgaatga tccgcgcgtt gagtatttct gggagcaaag tggctcactg
     4321 gaggtacaga ccgcctatct ggagcgccag ctcaccggta aacatgcatt cccgctgatt
     4381 gggtgcttcg acgatcggcc attcagctat ttcgaaatct actgggcggc ggaagaccgc
     4441 attggtcgtc actattcgtg gcagcccttt gaccgtggcc tgcatctgct ggttggtgaa
     4501 cagcaatggc gcggggccca ctatgtgcaa agctggctgc gcgggctgac acattacctg
     4561 ctgctggatg agccccgtac gcagcgcaca gtactggagc cacgcaccga taaccagcgc
     4621 ctgttccgcc atcttgagcc tgcgggatac cggacaatta aagagttcga cttcccacat
     4681 aagcgctcgc gcatggtgat ggcggatcgt catcacttct tcacggaggt cggtctgtaa
     4741 tgaatcacaa ggactgggat tttgttaacc gtcggctggt ggcaaaaatg ttgtctgaga
     4801 tggagtatga gcaggttttc cacgcggaat ctcagggcga tgaccactac tgcattaacc
     4861 tgccgggagc acaatggcgc ttcatcgctg aacgtggtat ctggggctgg ctgtggattg
     4921 atgcccaaac gttgcgctgc acggacgaac cagtactggc gcagacgctg ctgatgcagc
     4981 taaagccggt gctgtcaatg agtgatgcca ctgttgcaga gcatatgcag gatttgtatg
     5041 ccacgctact gggcgacctg caactgctga aggcccgtcg cggactgagt gccagtgacc
     5101 tgattaatct tgatgccgat cgtctgcaat gcctgctgag cggtcatcct aaattcgttt
     5161 ttaataaagg tcgccgtggc tggggcaaag aggcgctgga acgatatgcg ccagagtata
     5221 ccaacacctt cagactgcac tggctggcgg taaaacgtga acatatgatc tggcgctgcg
     5281 ataacgatct ggatattcag cagttgttga ctgccgcaat ggatccgcag gagtttacac
     5341 gcttcagtca ggtctggcag gaaaacgggc tggatcacaa ctggctaccg ctgccggtac
     5401 atccgtggca gtggcagcaa aaaatcgcca cagacttcat cgctgatttt gtcgaaggca
     5461 ggatggtgtc tctcggcgag tttggcgacc agtggctcgc ccagcagtcg ctgcgtaccc
     5521 tgaccaacgc cagccgccgg ggagggctgg atatcaagct gccgctgacc atctacaaca
     5581 cctcatgcta ccgggggatc cctggcagat atatcgctgc cggaccactg gcttcacgct
     5641 ggctgcaaca ggtttttgcg accgacgcca ccctggtgca aagcggcgca gtgatccttg
     5701 gtgaaccggc ggcaggctat gtgtcccatg aaggctatgc cgcgcttgcc cgggctccct
     5761 atcgctacca ggaaatgctt ggtgttatct ggcgggagaa tccgtgccgc tggctgaaac
     5821 cggatgaaag tcctgttctg atggcaacac tgatggagtg cgacgaaaac aatcagccgc
     5881 tggcaggcgc atatatcgac cgctccggac tggacgctga aacctggctt acgcaattgt
     5941 tccgggtggt tgtggttccg ctgtatcacc tgctttgccg ctacggtgtc gcgcttattg
     6001 cacacggaca aaatataacg ctcgccatga aagagggggt accacagcgt gttctgctga
     6061 aagacttcca gggcgatatg cggctggtga aagaagcgtt tcccgaaatg gactctttgc
     6121 ctcaggaggt gcgtgatgcc acatcccgtc tgagtgcgga ctacttaatc catgatttgc
     6181 agacgggtca cttcgtgaca gtactgcgtt ttatttcgcc actgatggtt cgtcttggcg
     6241 tacctgaaag gcgattttat caactgctgg cagcagtgtt gagtgattac atgaacaaac
     6301 atccacaaat ggcagagcgt tttgcgattt tctcactctt caggccacaa atcattcgcg
     6361 tggtgctgaa cccggtaaaa ctgacctggc cggacctgga tggcggcagt cgcatgctgc
     6421 cgaattacct tgagaatctg caaaatccgc tgtggctggt aactcaggaa tatgaatcat
     6481 gaaaaaaagt gtcgatttta ttggtgtcgg gacagggcca tttaatctca gcattgctgc
     6541 attgtcacat cagatcgaag aactgaactg tctcttcttt gacgaacatc ctcatttttc
     6601 ctggcatccg ggtatgctgg taccggattg tcatatgcag accgtctttc tgaaagatct
     6661 ggtcagtgca gttgcaccta caaatcccta cagctttgtt aactatctgg tgaagcacaa
     6721 aaagttctat cgcttcctta caagcaggct acgtacagta tcccgtgaag agttttctga
     6781 ctatctccgc tgggctgctg aagatatgaa taacctgtat ttcagtcata ccgttgaaaa
     6841 tattgatttc gacaaaaaaa gtcgattgtt tctggttcag accagtcggg gagaatattt
     6901 tgcccgcaat atctgccttg gtacaggaaa acaaccttat ttaccaccct gtgtgaagca
     6961 tgtgacacaa tcctgtttcc atgccagtga aatgaatctt cgtcggccgg acctgagtgg
     7021 aaaacggata accgtggttg gtggaggaca gagtggtgca gacctgttcc ttaatgcatt
     7081 acgcggggaa tggggagaag cggcggaaat aaactgggtc tcacggcgta ataattttaa
     7141 cgcactggat gaggctgctt ttgctgatga gtattttaca cctgaatata tttcaggctt
     7201 ctccggactg aaggaagata ttcgccatca gttactggat gagcagaaaa tgacatcgga
     7261 tggcatcact gccgattctt tactgaccat ttatcgtgag ttgtaccacc gttttgaagt
     7321 tctgagaaaa ccaagaaata tccgtctgct acccagtcgc tcggtaacaa ctctggaaag
     7381 tagtggtccg ggctggaggt tattgatgga acatcatctg gatcagggca gagagagcct
     7441 ggaaagtgat gtggtgattt tcgccacagg ttaccgttct gcattgccac aaatacttcc
     7501 ctcactgatg cccttgatca ccatgcacga taagaacacc tttaaagtgc gtgatgactt
     7561 cactctggaa tggagtggcc cgaaagaaaa taacatcttt gcggtcaacg ccagcatgca
     7621 aactcatggc atcgccgaac cccagctcag cctgatggcc tggcgatctg cacgtattct
     7681 taatcgcgta ctggggcgtg atttattcga tctcagtatg ccgcccgcac tgattcagtg
     7741 gcgcagcggc agccggaaaa aaccgcagcc ggaggctgct tctttaactc actatacagc
     7801 aaatattcag gaataacgat gatgcgcaaa aagtatatgc cccgggctct tggtccgctg
     7861 cttcttgtcg tgctgtcacc agctgtcgcc cagcaaaacg atgataatga gatcatagtg
     7921 tctgccagcc gcagcaatcg aactgtagcg gagatggcgc aaaccacctg ggttatcgaa
     7981 aatgccgaac tggagcagca gattcagggc ggtaaagagc tgaaagacgc actggctcag
     8041 ttaatccccg gccttgatgt cagcagccag agtcgaacca actacggtat gaacatgcgt
     8101 ggccgcccgc tggttgtcct gattgacggt gtgcgcctca actcttcacg ttccgacagc
     8161 cgacaactgg actctgtcga tccttttaat atcgaccata ttgaagtgat ctccggcgcg
     8221 acggccctgt acggtggcgg gagtaccgga gggttgatca acatcgtgac caaaaaaggt
     8281 cagccggaaa ccatgatgga gtttgaggct ggcacaaaaa gtggctttaa cagcagtaaa
     8341 gatcacgatg agcgcattgc cggtgctgtc tccggcggaa atgaccatat ctccggacgt
     8401 ctttccgtgg catatcagaa atttggcggc tggtttgacg gtaacggcga tgccaccctg
     8461 cttgataaca cccagaccgg cctgcagcac tccaatcggc tggacatcat gggaaccggt
     8521 acgctgaaca tcgatgaatc ccggcagctt caactgataa cgcagtacta taaaagtcag
     8581 ggagacgaca attacgggct taatctcggg aaaggctttt ccgccatcag cgggagcagc
     8641 acaccatacg tcagtaaggg gctgaattct gaccgcattc ccggcactga gcggcatttg
     8701 atcagcctgc agtactctga cagtgatttc ctgggacagg aactggtcgg tcaggtttac
     8761 taccgcgatg agtcgttgcg gtactacccg ttcccgacgg taaatgcgaa taaacaggcg
     8821 acggctttct cctcgtcaca gcaggatacc gaccagtacg gcatgaaact gactctgaac
     8881 agccaactga tggacggctg gcaaatcacc tgggggctgg atgctgagca tgagcgcttt
     8941 acctccaacc agatgttctt cgatctggct caggcaagtg cttccggagg gctgaacaac
     9001 cataagattt acaccaccgg gcgctatccg tcatatgaca tcaccaatct ggcggccttc
     9061 ctgcaatcca gctatgacat taatgatatt tttaccgtta gcggtggcgt acgctatcag
     9121 tatactgaga acagggtaga tgatttcatc gactacacgc agcaacagaa gattgctgcc
     9181 gggaaggcga tatctgccga cgccattcct ggtggttcgg tagattacga taactttctg
     9241 ttcaatgctg gtctgctgat gcacatcacc gaacgtcagc aggcatggtt caatttttcc
     9301 cagggggtgg cattgccgga tccggggaaa tattatggtc gcggcatcta tggtgcagca
     9361 gtgaacggcc atctttccct gacaaagagc gtgaacgtca gcgacagtaa gctggaaggc
     9421 gtgaaagtcg attcttatga actgggctgg cgctttaccg gtgacaacct gcggactcaa
     9481 atcgcggcat attactcgct ttccaataag agcgtggaaa ggaataaaga tctgaccatc
     9541 agtgtgaagg acgacaggcg ccgtatttac ggcgtggaag gtgcagtgga ctacctgatc
     9601 ccggatactg actggagtac cggtgtgaac ttcaatgtgc tgaaaaccga gtcgaaagtg
     9661 aacggtcaat ggcaaaaata tgacgtgaag gaatcaagtc catcgaaagc gacagcttac
     9721 attaactggg cgccggaacc gtggagtctg cgtgtacaga gcaccacttc tttcgacgta
     9781 agcgatgcag agggtaacga tattaatggt tacactaccg tcgattttat cagtagttgg
     9841 cagcttccgg tgggaacact cagcttcagc gttgagaacc tcttcgaccg tgactatacc
     9901 actgtctggg gacagcgtgc acctctgtac tacagcccgg gttacggccc tgcttcactg
     9961 tacgactaca aaggccgggg ccgaaccttt ggtctgaact actcagtgct gttctgacgg
    10021 ggatgctttt gcaacaaggg tatgctgtaa acaacatggt ccttggtggc catgttgttt
    10081 acagccagta taatatacag ccttaacaag atattccgtc tccggaatgg actgttcacc
    10141 actgaataac attatttctg ttttatggat ctttgactga aatttatcgc atatcctcat
    10201 ttcattgtcc gtctgaaaac taaccttaca agtaagcgtc gtctcagcac cgtctggcag
    10261 atcctgaaat tcctgagagg atgatctgcg cgtaaggcag tatgactttc cgtgagacag
    10321 atgct
//
LOCUS       DADMHC010000141        10246 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.143, whole genome shotgun sequence.
ACCESSION   DADMHC010000141 DADMHC010000000
VERSION     DADMHC010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10246)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10246)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10246
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.143"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..206)
                     /gene="marB"
                     /locus_tag="JNZ57_002954"
     CDS             complement(<1..206)
                     /gene="marB"
                     /locus_tag="JNZ57_002954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple antibiotic resistance protein MarB"
                     /protein_id="HAY8829099.1"
                     /translation="MKPLSSAIAAALILFSAQGVAEQTTQPVVTSCANVVVVPPSQEQ
                     PPFDLNHMGTGSDKSDALGVPYYN"
     gene            complement(238..621)
                     /gene="marA"
                     /locus_tag="JNZ57_002955"
     CDS             complement(238..621)
                     /gene="marA"
                     /locus_tag="JNZ57_002955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707445.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MDR efflux pump AcrAB transcriptional activator
                     MarA"
                     /protein_id="HAY8829100.1"
                     /translation="MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQR
                     MFKKETGHSLGQYIRSRKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDV
                     PPHKYRMTNMQGESRFLHPLNHYNS"
     gene            complement(641..1075)
                     /gene="marR"
                     /locus_tag="JNZ57_002956"
     CDS             complement(641..1075)
                     /gene="marR"
                     /locus_tag="JNZ57_002956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310164.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple antibiotic resistance transcriptional
                     regulator MarR"
                     /protein_id="HAY8829101.1"
                     /translation="MKSTSDLFNEIIPLGRLIHMVNQKKDRLLNEYLSPLDITAAQFK
                     VLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTT
                     SGAAICEQCHQLVGQDLHQELTKNLTADEVATLEHLLKKVLP"
     gene            1287..1952
                     /gene="marC"
                     /locus_tag="JNZ57_002957"
     CDS             1287..1952
                     /gene="marC"
                     /locus_tag="JNZ57_002957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter MarC"
                     /protein_id="HAY8829102.1"
                     /translation="MLDLFKAIGLGLVVLLPLANPLTTVALFLGLAGNMNSAERNRQS
                     LMASVYVFAIMMVAYYAGQLVMDTFGISIPGLRIAGGLIVAFIGFRMLFPQQKAIDSP
                     EAKSKSEELEDEPSANIAFVPLAMPSTAGPGTIAMIISSASTVRQSSTFADWVLMVAP
                     PLIFFLVAVILWGSLRSSGAIMRLVGKGGIEAISRLMGFLLVCMGVQFIINGILEIIK
                     TNH"
     gene            complement(1977..3167)
                     /gene="ydeA"
                     /locus_tag="JNZ57_002958"
     CDS             complement(1977..3167)
                     /gene="ydeA"
                     /locus_tag="JNZ57_002958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose MFS transporter"
                     /protein_id="HAY8829103.1"
                     /translation="MTTNTVSRKVAWLRVVTLAVAAFIFNTTEFVPVGLLSDIAQSFH
                     MQTAQVGIMLTIYAWVVALMSLPFMLMTSQVERRKLLICLFVVFIASHVLSFLSWSFT
                     VLVISRIGVAFAHAIFWSITASLAIRMAPAGKRAQALSLIATGTALAMVLGLPLGRIV
                     GQYFGWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLT
                     VVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASAL
                     VSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVA
                     MALFSGIFNIGIGAGALVGNQVSLHWSMSMIGYVGAVPAFAALIWSIIIFRRWPVTLE
                     EQTQ"
     gene            complement(3317..4023)
                     /gene="yneK"
                     /locus_tag="JNZ57_002959"
                     /pseudo
     CDS             complement(3317..4023)
                     /gene="yneK"
                     /locus_tag="JNZ57_002959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011379213.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putative protein YneK"
     gene            complement(3972..4430)
                     /gene="yneK"
                     /locus_tag="JNZ57_002960"
     CDS             complement(3972..4430)
                     /gene="yneK"
                     /locus_tag="JNZ57_002960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001598467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative protein YneK"
                     /protein_id="HAY8829104.1"
                     /translation="MVTPVSISNYISLPDDFPVRNIAPQVKEVLKNFIDALSTIICDE
                     EWRTSLNTNSATKKTFNNLDNLSYIQKTSFRGNDTLYNEKVQFKLTYPVKNGRHKENI
                     EFQVVINLSPIYLDNFRHDGEINIFALPTQSLSLWGAYFTPASSVCSFCF"
     gene            complement(4508..5389)
                     /locus_tag="JNZ57_002961"
     CDS             complement(4508..5389)
                     /locus_tag="JNZ57_002961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8829105.1"
                     /translation="MDLTQLEMFNAVAEAGSITQAAAIVLRVPSNLTTRLRQLETELG
                     VDLFIRENQRLRLSPAGHNFLRYSQQILALVDEARSVVAGDEPQGLFSLGSLESTAAV
                     RIPATLAEFNHRYPKIQFSLSTGPSGTMLEGVLEGKLNAAFIDGPINHTAIDGIPVYR
                     EELMIVTPQGHAPVIRASQVNGSNIYAFRANCSYRRHFESWFHADGAAPGTIHEMESY
                     HGMLACVVAGAGIALIPRSMLESMPGHHQVEAWPLAEQWRWLTTWLVWRRGAKTRPLE
                     AFIQLLDVPDSAKQGYQ"
     gene            5490..6878
                     /gene="sad"
                     /locus_tag="JNZ57_002962"
     CDS             5490..6878
                     /gene="sad"
                     /locus_tag="JNZ57_002962"
                     /EC_number="1.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416042.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate-semialdehyde dehydrogenase"
                     /protein_id="HAY8829106.1"
                     /translation="MTITPATHAISINPATGEQLSVLPWAGANDIENALQLAAAGFRD
                     WRETNIDYRAEKLRGIGKALRARSEEMAQMITREMGKPINQARAEVAKSANLCDWYAE
                     HGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPIILAGNGYLLK
                     HAPNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDGVSQMIKDSRIAAVTVTGSVRAGA
                     AIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFII
                     EEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEKTLAQGARLL
                     LGGEKMAGAGNYYPPTVLANVTPEMTAFREEMFGPVAAITVAKDAEHALELANDSEFG
                     LSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHE
                     FCNIQTVWKDRI"
     gene            6942..7868
                     /gene="glsB"
                     /locus_tag="JNZ57_002963"
     CDS             6942..7868
                     /gene="glsB"
                     /locus_tag="JNZ57_002963"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase B"
                     /protein_id="HAY8829107.1"
                     /translation="MAVAMDNAILENILRQVRPLIGQGKVADYIPALATVDGSRLGIA
                     ICTVDGQLFQAGDAQERFSIQSISKVLSLVVAMRHYSEEEIWQRVGKDPSGSPFNSLV
                     QLEMEQGIPRNPFINAGALVVCDMLQGRLSAPRQRMLEVVRGLSGVSDISYDTVVARS
                     EFEHSARNAAIAWLMKSFGNFHHDVTTVLQNYFHYCALKMSCVELARTFVFLANQGKA
                     IHIDEPVVTPMQARQINALMATSGMYQNAGEFAWRVGLPAKSGVGGGIVAIVPHEMAI
                     AVWSPELDDAGNSLAGIAVLEQLTKQLGRSVY"
     gene            7868..8227
                     /locus_tag="JNZ57_002964"
     CDS             7868..8227
                     /locus_tag="JNZ57_002964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4186 domain-containing protein"
                     /protein_id="HAY8829108.1"
                     /translation="MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAAD
                     FVAKRLAPALPANDGKQTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEEQQR
                     YIVAVIYHWLVVQMNQP"
     gene            8366..9784
                     /locus_tag="JNZ57_002965"
     CDS             8366..9784
                     /locus_tag="JNZ57_002965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310156.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HAY8829109.1"
                     /translation="MHVHPISTFRLFQEGHLLRNSIAIFALTTLFYFIVAELRLVHEL
                     SLFWPLNGVMAGVFARYVWLNRLHYYAISYVAMLVYDAITTEWGLVSLVINFSNMMFI
                     VTVALLVVRDKRLGKNKYEPVSALRLFNYCLIAALLCAIVGAIGSVSIDSLDFWPLLA
                     DWFSEQFSTGVLIVPCMLTLAIPGVLPRFKAEQMMPAIALIVSVIASVVIGGAGSLAF
                     PLPALIWCAVRYTPQVTCLLTFVTGAVEIVLVANSVIDISVGSPFSIPEMFSARLGIA
                     TMAICPIMVSFSVAAINSLMKQVALRADFDFLTQVYSRSGLYEALKSPSLKQTQHLTV
                     MLLDIDYFKSINDNYGHECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNP
                     VDGLLMAEKIRKGVELQPFTWQQKTLYLTVSIGVGSGRASYRTLTDDFNKLMVEADTC
                     LYRSKKDGRNRTSTMRYGEEVV"
     gene            10011..>10246
                     /locus_tag="JNZ57_002966"
     CDS             10011..>10246
                     /locus_tag="JNZ57_002966"
                     /EC_number="1.1.1.58"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310155.1"
                     /note="catalyzes the formation of D-tagaturonate from
                     D-altronate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagaturonate reductase"
                     /protein_id="HAY8829110.1"
                     /translation="MKTLNRRDIPGAQYPERIIQFGEGNFLRAFVDWQIDLLNEHTDL
                     NSGVVVVRPIETSFPPSLSTQDGLYTTIIRGLNE"
BASE COUNT         2562 a         2352 c         2643 g         2689 t
ORIGIN      
        1 tgattataat agggcacgcc gagcgcatcc gacttatcac tgccagtacc catgtgattt
       61 aaatcaaacg gtggttgttc ctgcgatggg ggaacaacca cgacattggc acaagaagta
      121 acaactggct gcgtggtttg ttccgcaacg ccctgcgcgg aaaagagaat aagcgcagct
      181 gctattgcgg atgaaagtgg tttcatgatt gcctcagtga cgttgtcacg ttatcaacta
      241 gctattgtaa tgatttaatg gatgtaaaaa gcgcgattcg ccctgcatat tggtcatccg
      301 gtatttatgt ggcggaacat caaagtaatt tttgaaggtt cgggtcagag tttgttgcga
      361 ctcgaagcca tatcgttctg ccagatagag tatcggctcg ttactttcct tcagcttttg
      421 cgcgatttcc gtcatcttac ggctgcggat gtattggcct aatgaatgac cggtttcttt
      481 tttaaacatc cgttgcaggt gccatttaga gtaacctgaa cgctctgaca ctttctccag
      541 tgacagtggc gattccaggt tgtcctcgat ccagtccaaa atgctatgaa tggtaatagc
      601 gtcagtattg cgtctggaca tcgtcatacc tcttttttgt ttacggcagg actttcttaa
      661 gcaaatgctc aagtgttgcc acttcgtccg ccgtcaggtt ttttgttaat tcttgatgca
      721 ggtcctggcc aactaattga tggcattgtt cgcatattgc cgcgccgctg gtggtaagtt
      781 ttaccagtac gccgcgctta tcattcgggt tcggcaacct ttcaacccag cctttacaga
      841 ccaggcgatc cagcatacgg gtcagtgctc caaggtcgac agacaacact tttttcagtt
      901 caaccggagt aatacacgcc gcgcagcgga tagagcagag caccttaaac tgtgccgcgg
      961 taatatccag cggagacaga tactcgttaa gcagacgatc tttcttctga ttaaccatat
     1021 ggattaagcg acccaatgga ataatttcat tgaacagatc gctggtactt ttcacattag
     1081 ttgccctggc aagtaattag ttgcaggggg taatattgcc caggcaaata taagtcaaat
     1141 aaatgaattg accgatgcca cgttttgcta aatcggttca agttttggtc aatgcgatgc
     1201 aaggttagct aaagagtgac actttatcct tgtttacccc ttatactttt cgctgataac
     1261 ccagatacac tggataacaa ccaccaatgt tagatttgtt taaagcaatt ggcctggggc
     1321 tggtggtgtt actgccgtta gctaacccat taacaactgt cgcgttattt cttggcctgg
     1381 caggcaacat gaacagtgcc gaacgtaatc gtcagtcgtt gatggcctcg gtgtacgtat
     1441 ttgccatcat gatggtggcg tattacgccg ggcaactggt gatggataca tttggcattt
     1501 cgattcccgg tctgcgaatt gcaggcggct taatcgtcgc gtttatcggt tttcggatgc
     1561 tctttccgca acagaaagcg attgattcac cggaggcgaa aagcaagtcg gaagagctgg
     1621 aagatgaacc cagtgccaat attgcctttg tgccgctagc aatgccaagt accgctggtc
     1681 cgggaaccat agcgatgatt attagctcgg cgtccacagt gcgtcagagt tcaaccttcg
     1741 ctgattgggt actgatggtt gcgccgccgc tgatcttttt cctggtggcg gttattttgt
     1801 ggggaagcct acgcagctcc ggcgcaatta tgcggctggt gggcaagggt ggcattgaag
     1861 cgatctcccg tctgatggga ttcctgctgg tatgtatggg tgtgcagttt attattaacg
     1921 gcatcctgga aatcattaaa acgaaccatt aaaaaaggcc cgaatgggcc tttcaactat
     1981 tgcgtctgtt cttcgagtgt cactggccag cggcgaaata taatgattga ccatattaac
     2041 gcggcaaaag caggcaccgc gcccacataa ccaatcatcg acattgacca gtgcaaactc
     2101 acctgattac ctaccaacgc acccgccccg attccaatat taaatatgcc ggagaatagc
     2161 gccatcgcga cgtcggtagc atctggtgcc agcgccagca ctttaacctg cataccaagc
     2221 ccgatgatca tcatcgcgat cccccagaaa atactcagca ccccgaggtg tatttcactg
     2281 ttcgccgcag gtagcagcag tgccagacac accagcaaca gcgcaatcgc cgtactcacc
     2341 aacgcagacg catactgatt acccagttta ccgaaaatca cgctgccaat aatgcccgca
     2401 ccaccgagta ataacagtaa tgccgtggca aagttggcgc tgaatcccgc aatgttttgc
     2461 acaaaaggct cgatatagct gtatgccgtg taatgggcgg tgacaaccac cacagttaac
     2521 aaataaatgc tcatcaatgc cgggcggcgg aacaatagcg ggaggctttt caatgaaccg
     2581 gaatgctcac tgggcagtaa gggaagtaac ttaatcaggc acaaaagggt gataagcgcc
     2641 ccaataccaa tcgcgaagaa ggtcattcgc caaccgaaat actgccccac aatgcgcccg
     2701 agaggtaaac ctaagaccat cgccagtgct gtaccggtgg caattaaact caaggcctgt
     2761 gcccgcttcc cggccggagc catacggatc gccagagacg ccgtaatcga ccagaaaatc
     2821 gcatgtgcaa aagccacacc aatgcgactg atcaccagaa cggtaaagct ccacgataaa
     2881 aacgacagta cgtggctggc aataaacacc acaaacaggc agatcagtaa tttgcgccgt
     2941 tcaacctgac tggtcattaa cataaaaggc aatgacatta gcgctactac ccatgcgtaa
     3001 atggtcaaca tgatgccgac ctgagcggtt tgcatgtgaa aactttgcgc aatgtcagag
     3061 agcaggccaa cagggacaaa ttcggtggtg ttgaagatga aggcggcgac tgccagcgta
     3121 acgacccgta gccacgccac tttgcgggaa acagtgtttg ttgtcataac agattatcgg
     3181 gtgagttgcg aaaaagtgat gaaatgatct taaaacggtt aatgatgtga atacaatgca
     3241 tttgtgatct ggatcgcgtt ttccgtttct ctgacgctga ttctgttccg cgtcagagag
     3301 tcggtaacat cacggtttaa tgacgttcag ggaggtctgg cgttttggcg gttgcgggta
     3361 taggtggtct gacaggggag cgaggcctgt ttttcaccag gtcttcgtga gtaacttttg
     3421 gcggcgtttc attttttaca aacagtttga gggtcctgcg cgccatatgc ttgataattt
     3481 tatcatcact taatgatgct ggcatcaaca cgtcattcag atcactttca ttgggattca
     3541 taaattggtg atagtgcaat aacatattgg cgaaaaataa aaaaagtcct gaaaatgagg
     3601 agattcttgt tctgctaaaa gggataaaaa gcagatgcag acttcgggta gtacatgttt
     3661 gttagaacct aatgaatcca tcaggctttg caataaatcc tcttttaatt cgccgtctgt
     3721 tatgtcgaga atggcggtga tcaagttagg atctttattg acgaaccatc tgtgaacctc
     3781 agagttactc cataatcggg ggagtatgac aaaattaccg cgagagataa aattcaggac
     3841 aagcaaatca aactggcgta agtaatctgc agcggtatgg tgatccggag gcaggggttc
     3901 aatatgtggt gtatgcgctt ttttgatggg gacgccaagg tggatcattg gaaattgttc
     3961 aataaaatca ttcagaaaca gaaagagcac acgctcgacg ccggtgtgaa atacgcgccc
     4021 catagtgaca ggctttgggt tgggagcgca aaaatattaa tttctccatc atggcgaaaa
     4081 ttatctaaat aaatagggct taaatttatt actacctgaa attcaatatt ttctttgtgt
     4141 cttccattct tgacgggata agtgagttta aactgaacct tttcattgta tagtgtgtcg
     4201 ttaccccgaa aagaagtctt ctgaatatat gataagttat caaggttgtt aaatgtcttt
     4261 tttgtggctg agttggtgtt taaagacgtg cgccactctt catcacatat tatggtactg
     4321 agtgcatcaa taaaattctt taaaacttct tttacctgag gtgcaatatt acgtacggga
     4381 aaatcatcag gaagagatat gtaattactg atgcttactg gcgtaaccat atttgcccca
     4441 tatagtcata agtcatcgga acatcactat atagggcatt tgagctgcaa gaactatcaa
     4501 aaatagctca ttggtaaccc tgttttgccg agtcaggcac atccagtagt tgaataaatg
     4561 cctcaagcgg acgcgttttc gcaccacgac gccagaccag ccaggttgtt aaccaacgcc
     4621 attgctcagc taacggccac gcttcaacct ggtgatgccc cggcatactt tccagcatag
     4681 agcgtggaat aagcgcaatg cctgctcctg cgaccacaca ggccaacatc ccgtgatacg
     4741 actccatctc gtgaatagtt cccggagcgg caccgtcagc atgaaaccag ctctcgaagt
     4801 ggcgacgata cgaacaattg gcgcggaagg cataaatgtt actgccgtta acctgactgg
     4861 cgcggattac tggcgcatga ccttgtggcg tgacgatcat cagctcctcg cggtataccg
     4921 gtatcccgtc aatggcagta tggttaatgg gcccatcaat aaatgccgca ttcagttttc
     4981 cctccagcac tccttccagc atagtgccgg aagggccggt ggaaagtgaa aactgaattt
     5041 tgggataacg atggttgaat tccgccagcg tggccggaat gcgcactgct gcggtacttt
     5101 ccagcgaacc aagagaaaat aaaccttgcg gctcatcgcc agcgacaacg ctccgcgctt
     5161 catccactaa cgcgagaatt tgttggctat agcgtaaaaa gttatgcccg gcaggagaga
     5221 gacgtaaacg ctgattctcg cgaataaaca gatctacccc cagttctgtt tccagctggc
     5281 gtagacgggt agtgagattc gacggcacgc gaagcactat tgctgctgcc tgggttatgc
     5341 tgccagcttc ggcaaccgcg ttgaacatct ccagttgggt cagatccata atattctcga
     5401 ttcgtgaata agtggcttaa tattattcat tttaaagcaa gagtaaatct gcgtatcttc
     5461 ataccatgac tcataaagga gataccccga tgaccattac tccggcaact catgcaattt
     5521 cgataaatcc tgccacgggt gaacaacttt ctgtgctgcc gtgggctggc gctaacgata
     5581 tcgaaaacgc acttcagctg gcggcagcag gctttcgcga ctggcgcgag acaaatatag
     5641 attatcgtgc tgaaaaactg cgtggtatcg gtaaggctct gcgcgcccgt agcgaagaaa
     5701 tggcgcaaat gatcacccgt gaaatgggca aaccaatcaa tcaggcgcgc gctgaagtgg
     5761 cgaaatcggc gaatttgtgt gactggtatg cagaacatgg tccggcaatg ctgaaggcgg
     5821 aacctacgct ggtggaaaat cagcaggcag ttattgagta tcgaccgttg gggacgattc
     5881 tggcgattat gccgtggaac tttccgttat ggcaggtgat gcgtggcgcg gttcccatca
     5941 ttcttgcagg taacggctac ttacttaaac atgcgccgaa tgtgatgggc tgtgctcagc
     6001 tcattgccca ggtgtttaaa gatgcgggaa tcccgcaagg cgtatatggc tggctgaatg
     6061 ccgacaacga cggtgtcagt caaatgatta aagattcgcg cattgctgct gtcacggtga
     6121 ccggaagtgt tcgtgcggga gcggctattg gcgcacaggc tggagcggca ctgaaaaaat
     6181 gcgtactgga actgggcggt tcggatccat ttattgtgct taacgatgcc gatctggaac
     6241 tggcggttaa agcggcggta gccggacgtt atcagaatac cggacaggtt tgtgcagcgg
     6301 caaaacgctt tattatcgaa gagggaattg cttctgcatt taccgaacgt tttgtggcag
     6361 ctgcggcagc cttgaaaatg ggcgatcccc gtgatgaaga gaacgctctc ggaccaatgg
     6421 ctcgttttga tttacgtgat gagctgcatc atcaggtgga gaaaaccctg gcgcagggtg
     6481 cgcgtttgtt actgggcggg gaaaagatgg ctggggcagg taactactat ccgccaacgg
     6541 ttctggcgaa tgttacccca gaaatgaccg cgtttcggga agaaatgttt ggccctgttg
     6601 cggcaatcac cgttgcgaaa gatgcagaac atgcgctgga actggctaat gatagtgagt
     6661 tcggcctttc agcgaccatt tttaccaccg acgaaacaca ggccagacag atggcggcac
     6721 gtctggaatg cggtggggtg tttatcaatg gttattgtgc cagcgacgcg cgagtggcct
     6781 ttggtggcgt gaaaaagagt ggctttggtc gtgagctttc ccatttcggc ttacacgaat
     6841 tctgtaatat ccagacggtg tggaaagacc ggatctgacg cgacatattc agctctgata
     6901 tactcgcagg tcttttcaga cctgcggtcc aggagtagaa agtggcagtc gccatggata
     6961 atgcaatttt agaaaacatc ttgcggcaag tgcggccgct cattggtcag ggtaaagtcg
     7021 cggattatat tccggcgctg gctacagtag acggttcccg attgggcatt gctatctgta
     7081 ccgttgacgg acagcttttt caggccggag acgcgcaaga acgtttttcc attcagtcta
     7141 tttccaaagt gctgagtctc gttgtcgcca tgcgtcatta ctccgaagag gaaatctggc
     7201 aacgcgtcgg caaagatccg tctggatcac cgttcaattc tttagtgcaa ctggaaatgg
     7261 agcagggtat tccgcgtaat ccgtttatta atgctggtgc gctggtggtc tgcgatatgt
     7321 tgcaagggcg attaagcgca ccacggcaac gtatgctgga agtcgtgcgc ggcttaagcg
     7381 gtgtgtctga tatttcatac gatacggtgg tagcgcgttc cgaatttgaa cattccgcgc
     7441 gaaatgcggc tatcgcctgg ctgatgaagt cgtttggcaa tttccatcat gacgtgacaa
     7501 ccgttctgca aaactacttt cattactgcg ctctgaaaat gagctgtgta gagctggccc
     7561 ggacgtttgt ctttctggct aatcagggga aagctattca tattgatgaa cctgtggtga
     7621 cgccaatgca ggcgcggcaa attaacgcgc tgatggcgac cagtggtatg taccagaacg
     7681 cgggggagtt tgcctggcgg gtggggctac cggcgaaatc tggcgttggt ggcggtattg
     7741 tggcgattgt tccgcatgaa atggccatcg ctgtctggag tccggaactg gatgatgcag
     7801 gtaactcgct tgcgggtatc gccgtccttg aacaattgac gaaacagtta gggcgttcgg
     7861 tttattaatg cagtctctcg atccactctt cgcgcgttta tcccgttcaa aatttcgctc
     7921 tcgctttcgt ctgggcatga aagagcgtca gtattgcctg gagaaaggcg cgccagtcat
     7981 cgaacaacat gcggcggatt ttgtcgctaa acgtcttgct ccggcattac cggctaatga
     8041 cggtaagcaa acacccatgc gcgggcatcc ggtgtttatc gctcagcacg ccaccgcgac
     8101 ctgctgtcgc ggttgtctgg ctaagtggca taacattccg cagggtgttt cgttaagcga
     8161 agaacaacaa cgttatatcg tggcggtaat ctatcactgg ctggttgtac agatgaatca
     8221 gccatgagaa ttgcggaaaa cgataaaata gcattcccag ggtaccttta tttgccgccg
     8281 ctgttagcga acatgctatc ctttatgaga atttacttat tacgttgaga taattgccac
     8341 ccgcaattgt atggacagat aattaatgca tgtacacccc atttcaactt tccgtttgtt
     8401 ccaggaaggt catctgctac gtaatagcat cgctattttt gcgctaacca cgctgttcta
     8461 ttttattgtt gcagagttac ggctggttca cgaactttct cttttctggc cgctgaatgg
     8521 cgtaatggcg ggggtgtttg cccgctatgt ctggcttaat cgactgcatt actatgcgat
     8581 cagttatgtg gcgatgctgg tttatgatgc cataaccacc gaatggggac tggtttcact
     8641 ggttatcaat ttctccaata tgatgtttat tgttaccgtc gccttactgg tcgtgcggga
     8701 taagcgtctg gggaaaaata agtatgagcc agtaagtgcc ttacggctat ttaattactg
     8761 tctgattgcc gcattattat gcgctattgt cggggcgatt ggttcggtca gtattgatag
     8821 tctggatttc tggcctttgc ttgcggactg gttcagtgag caattctcaa cgggcgtgtt
     8881 gatcgtgcct tgtatgctga cgttggctat tcctggagtg ctgccgcgct ttaaagcaga
     8941 acagatgatg cccgccatcg cgcttattgt gtcggttatt gcctcggtag tcattggcgg
     9001 agcggggagt ctggcgttcc cgctgcctgc attaatctgg tgtgcagtgc gctatacgcc
     9061 gcaggtaaca tgtctgttga cctttgtcac cggtgcggtg gaaatcgtac tggtggcaaa
     9121 ttcggtgatt gatatctcgg tcggttcgcc gttctccatt ccggaaatgt tctccgcacg
     9181 tctcggtatt gccacgatgg cgatatgccc aattatggtt tcttttagcg tggcagcgat
     9241 caattcgcta atgaagcaag ttgcgctgcg agccgacttt gattttctga ctcaggttta
     9301 ctcacggtcc ggtctttatg aggcgctgaa aagtccatcg ctgaaacaga cacaacatct
     9361 gacggtcatg ctgcttgata tcgactattt caaaagcatt aacgataact atggacatga
     9421 atgtggcgat aaagtgttaa gcgtgtttgc ccggcatatt cagaagattg tcggtgataa
     9481 ggggctggtg gcgcgcatgg gcggcgaaga atttgctgtt gcagtgccgt cggtgaatcc
     9541 tgtcgatggt ctgctaatgg cggaaaaaat ccgtaaaggc gttgaactgc aaccattcac
     9601 ctggcaacaa aaaacgcttt atctcacggt aagtattggc gtcggtagtg gtcgcgcatc
     9661 gtaccgaacg ctgaccgatg attttaataa attgatggtc gaagccgata cgtgtctgta
     9721 tcgctcgaag aaagatgggc gcaaccgtac cagcactatg cgttacggtg aggaagttgt
     9781 ctgacatctt tattcattcc gcgcgatttg aatgcaatgt gttctaccac tttatgatcc
     9841 aggaaaaggc gtatttcctc gattaaacca tgaaccgcgc cacacgtttc tcataaaact
     9901 gctcattaat catcaggagt tgatcaaaac aggggttcgg cgtattaaac tttgttaacc
     9961 tgtcatacca attcaaacgg gttgtgtgac taatcagaag ggaacccatt gtgaaaacac
    10021 taaatcgtcg cgatattccc ggtgcacagt atccagaacg tatcattcag tttggtgaag
    10081 gtaacttcct gcgcgccttt gttgactggc aaatcgatct cctgaatgag cacaccgatc
    10141 tgaattctgg cgtggtcgtt gttcgtccga ttgaaacttc attcccgccg tcactgagca
    10201 cgcaggatgg tctgtacacc accattatcc gtggcctgaa tgagaa
//
LOCUS       DADMHC010000142        10221 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.144, whole genome shotgun sequence.
ACCESSION   DADMHC010000142 DADMHC010000000
VERSION     DADMHC010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10221)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10221)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10221
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.144"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            142..2010
                     /gene="kup"
                     /locus_tag="JNZ57_002967"
     CDS             142..2010
                     /gene="kup"
                     /locus_tag="JNZ57_002967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity potassium transporter Kup"
                     /protein_id="HAY8829111.1"
                     /translation="MSTDNKQSLPAITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGV
                     ERDAVFGFLSLIFWLLIFVVSIKYLTFVMRADNAGEGGILTLMSLAGRNTSARTTSML
                     VIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQLDTWIVPLSIIVLTLLFMIQKH
                     GTAMVGKLFAPIMLTWFLILAGLGLRSIIANPEVLHALNPMWAVHFFLEYKTVSFIAL
                     GAVVLSITGVEALYADMGHFGKFPIRLAWFTVVLPSLTLNYFGQGALLLKNPEAIKNP
                     FFLLAPDWALIPLLIIAALATVIASQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMES
                     GQIYIPFVNWMLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARQNWHW
                     NKYFVALILIAFLCVDIPLFTANLDKLLSGGWLPLSLGTVMFIVMTTWKSERFRLLRR
                     MHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALMHNLKHNKVLHERVILL
                     TLRTEDAPYVHNVRRVQIEQLSLTFWRVVASYGWRETPNVEEVFHRCGLEGLSCRMME
                     TSFFMSHESLILGKRPWYLRLRGKLYLLLQRNALRAPDQFEIPPNRVIELGTQVEI"
     gene            2177..2596
                     /gene="rbsD"
                     /locus_tag="JNZ57_002968"
     CDS             2177..2596
                     /gene="rbsD"
                     /locus_tag="JNZ57_002968"
                     /EC_number="5.4.99.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709562.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribose pyranase"
                     /protein_id="HAY8829112.1"
                     /translation="MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMAL
                     TQGVPSFMQVLGVVTNEMQVEAAIIAEEIKQHNPQLHETLLTHLEQLQKHQGNTIEIR
                     YTTHEQFKQQTAESQAVIRSGECSPYANIILCAGVTF"
     gene            2604..4073
                     /gene="rbsA"
                     /locus_tag="JNZ57_002969"
                     /pseudo
     CDS             2604..4073
                     /gene="rbsA"
                     /locus_tag="JNZ57_002969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418205.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter ATP-binding protein RbsA"
     gene            4078..5032
                     /gene="rbsC"
                     /locus_tag="JNZ57_002970"
                     /pseudo
     CDS             4078..5032
                     /gene="rbsC"
                     /locus_tag="JNZ57_002970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002882531.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter permease"
     gene            5057..5943
                     /gene="rbsB"
                     /locus_tag="JNZ57_002971"
                     /pseudo
     CDS             5057..5943
                     /gene="rbsB"
                     /locus_tag="JNZ57_002971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312720.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter substrate-binding protein
                     RbsB"
     gene            6069..6998
                     /gene="rbsK"
                     /locus_tag="JNZ57_002972"
     CDS             6069..6998
                     /gene="rbsK"
                     /locus_tag="JNZ57_002972"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HAY8829113.1"
                     /translation="MQNAGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKG
                     ANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFV
                     NGEGENVIGIHAGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNK
                     TIVALNPAPARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIR
                     TVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIR
                     FAHAAAAIAVTRKGAQPSVPWREEIDVFLDRQR"
     gene            7002..7994
                     /gene="rbsR"
                     /locus_tag="JNZ57_002973"
     CDS             7002..7994
                     /gene="rbsR"
                     /locus_tag="JNZ57_002973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose operon transcriptional repressor RbsR"
                     /protein_id="HAY8829114.1"
                     /translation="MATMKDVSRLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELN
                     YAPSALARSLKLNQTHTIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQ
                     RMNRNLETLMQKRVDGLLLLCTETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDN
                     SLLGGDLATQYLIDKGHTRIACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTG
                     DFEFNGGFDAMRQLLSHPLRPQAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDI
                     ELASFMTPPLTTIHQPKDELGELAIDVLIHRITQPTLQQQRLQLTPILMERGSA"
     gene            complement(7960..9387)
                     /locus_tag="JNZ57_002974"
     CDS             complement(7960..9387)
                     /locus_tag="JNZ57_002974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HAY8829115.1"
                     /translation="MSDKKKRSMAGLPWIAAMAFFMQALDATILNTALPAIAHSLNRS
                     PLAMQSAIISYTLTVAMFIPVSGWLADRFGTRRIFTLAVSLFTLGSLACALSNSLPQL
                     VVFRVIQGIGGAMMMPVARLALLRAYPRNELLPVLNFVAMPGLVGPILGPVLGGVLVT
                     WATWHWIFLINIPIGIAGLLYARKHMPNFTTARRRFDITGFLLFGLSLVLFSSGIELF
                     GEKIVASWIALTVIVTSIGLLLLYILHARHTPNPLISLDLFKTRTFSIGIVGNIATRL
                     GTGSVPFLMPLMLQVGFGYQAFIAGCMMAPTALGSIIAKSMVTQVLRRLGYRHTLVGI
                     TVIIGLMIAQFSLQSPAMAIWMLILPLFILGMAMSTQFTAMNTITLADLTDDNASSGN
                     SVLAVTQQLSISLGVAVSAAVLRVYKGMEGTTTVEQFHYTFITMGIITVASAAMFMLL
                     KTTDGNNLIKRQRKSKPNRVPSESE"
     gene            complement(9410..10102)
                     /locus_tag="JNZ57_002975"
     CDS             complement(9410..10102)
                     /locus_tag="JNZ57_002975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312724.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HAY8829116.1"
                     /translation="MPLSAQQLAAQKNLSYVLAEKLAQRILKGEYEPGTILPSEIELG
                     EQFGVSRTAVREAVKTLTAKGMVLPRPRIGTRVMPQSNWNFLDQELLTWWMTEENFHQ
                     VIDHFLVMRICLEPQACLLAATVGTAEQKAHLNTLMAEMAALKKNFRRERWIEVDMAW
                     HEHIYEMSANPFLTSFASLFHSVYHTYFTSITSDTVIKLDLHQAIVDAIIQSDGDAAF
                     KACQALLRSPDK"
BASE COUNT         2490 a         2454 c         2702 g         2575 t
ORIGIN      
        1 aagggggggt atttttcttt gagccaggtt aatgtggccg catttaggag tacgattttg
       61 ccgttaatcg tgcatactgt gcgctttttt gtgggccaag ggactaagca cacatttcat
      121 atttcaacga aagactagtc tatgagcact gataataagc aatcattgcc cgcgattacc
      181 ctcgcggcga ttggagttgt ctacggcgat attggtacca gcccgttata tacacttcgt
      241 gaatgtttgt ccggccagtt tggttttggc gttgaacgcg atgccgtgtt tggcttttta
      301 tcgctgatct tctggctgct aatctttgtg gtttccatta aatatctcac cttcgtgatg
      361 cgggcagata acgccggtga gggggggatc ctgacgttga tgtcgcttgc cgggcgtaat
      421 acgtcggcac gaaccacatc aatgctggtg attatggggc taatcggcgg cagctttttc
      481 tatggtgaag tcgtcataac acccgctatt tcggtgatgt cagccattga aggtctggaa
      541 atcgtcgccc cgcagctgga tacctggata gttcccctct caattatcgt tctcacttta
      601 ttatttatga ttcaaaaaca tggcacggct atggtcggta agctgtttgc gccgatcatg
      661 ctgacctggt ttttgattct ggcaggactg gggttacgta gcattattgc taacccggaa
      721 gtgctgcatg cgctgaatcc aatgtgggcg gtgcatttct tccttgaata caaaacggtt
      781 tcttttattg cattaggggc agtggtgttg tcgattacgg gggtcgaggc gctgtatgct
      841 gatatggggc actttggtaa gttccctatt cgcctggcgt ggttcaccgt cgtattacct
      901 tccttgaccc ttaattactt cggtcagggg gcgctgttgt taaagaaccc ggaagcgatt
      961 aagaacccgt tcttcctgtt ggcaccggac tgggcgctga tcccgctgct gatcatcgcc
     1021 gcactggcga cggtaattgc ctcgcaggcg gttatctctg gcgtcttctc attgacgcgt
     1081 caggcggtac gtctgggata tttgtcgccg atgcgcatta ttcacacctc cgaaatggag
     1141 tcagggcaaa tctatattcc gtttgtgaac tggatgctct atgtcgcggt cgtgattgtg
     1201 attgtcagct ttgagcactc cagcaacctg gcggcggcgt acgggattgc ggtgaccgga
     1261 accatggtgc tgacgtctat tctctcgact accgtggcac gtcagaactg gcactggaat
     1321 aagtattttg ttgcgctgat cctgattgct ttcctttgtg tcgatattcc attgttcacc
     1381 gctaacctcg ataaactgct ctccggcggt tggttgccat tgagcctcgg tacggtgatg
     1441 tttatcgtga tgaccacctg gaagagcgag cgtttccgct tgctgcggcg gatgcatgaa
     1501 catggtaact ctctggaagc gatgattgct tcgctggaga aatcaccgcc tgttcgcgtg
     1561 cccgggaccg cggtgtatat gtcgcgtgca atcaacgtca ttccctttgc gctgatgcat
     1621 aaccttaaac ataacaaggt attgcatgag cgggtgattt tgttaactct gcgtaccgaa
     1681 gacgcgccat atgtccataa tgtccgtcgg gtacagattg aacaactgtc gctcactttc
     1741 tggcgcgtgg tggcaagtta tggttggcga gaaacgccaa acgtggaaga agttttccac
     1801 cgctgcggtc tggaaggatt aagttgccgg atgatggaaa cctccttctt tatgtcgcat
     1861 gagtcgttga tcctcggcaa acgcccgtgg tatttgcgtc tgcgcggcaa gctgtacttg
     1921 ctgctgcaac gtaatgcgct gcgtgcacca gatcaatttg aaatcccgcc aaacagggtt
     1981 atcgaactgg gtactcaggt cgaaatctaa cgccagacgc ctcctttctc cataaggggg
     2041 cgtttttgtt ttcatggtta atcaccatgt aaaacgtttc gaggttgatc acatttccgt
     2101 aacgtcacga tggttttccc aactcagtca ggattaaact gcgggtcagc gaaacgtttc
     2161 gctgatggag aaaaaaatga aaaaaggcac cgttcttaat tctgatattt catcggtgat
     2221 ctcccgtctg ggacataccg atacgctggt ggtgtgtgat gctggtttac ccatccccaa
     2281 aagtacaacg cgtatcgata tggcattaac ccagggtgta ccttctttta tgcaggtgct
     2341 gggcgtcgtt acaaatgaaa tgcaggtcga ggctgccatt atcgcggaag agatcaaaca
     2401 acataatccg caactccacg aaacgttgct cactcacctt gagcagctgc aaaaacacca
     2461 gggaaatacc attgaaattc gttacaccac gcatgaacaa ttcaaacaac aaaccgcaga
     2521 aagtcaggcg gtaattcgca gcggagaatg ttctccgtat gcgaatatca ttctctgtgc
     2581 tggcgtgacg ttctgaggcc gtcatggaag cattacttca gcttaaaggc atcgataaag
     2641 ccttcccggg cgtaaaagcc ctctcgggcg ctgcgttaaa tgtctatccg ggccgcgtga
     2701 tggcgctggt gggcgaaaac ggcgcgggta aatccaccat gatgaaagtg cttactggta
     2761 tctatgctcg cgatgccggc acgcttttat ggctggggaa agaaacgaca tttaccgggc
     2821 cgaaatcttc ccaggaagcc gggattggga ttatccatca ggaactgaac ctgatcccgc
     2881 agttgaccat tgccgaaaac attttcctcg gtcgtgagtt tgttaatcgc tttggcaaaa
     2941 ttgactggaa aaccatgtat gccgaagcgg ataaattgct ggctaaactt aacctgcgct
     3001 ttaaaagcga caagctggtg ggcgatcttt ccatcggtga ccagcaaatg gttgaaatcg
     3061 ccaaagtgct gagctttgag tcgaaagtca tcattatgga tgaaccgacc gatgcgctga
     3121 ccgataccga aacagaatcc ctgttccgcg tcatccgcga actaaaatcg caaggccgcg
     3181 gtattgtcta tatctcccac cgcatgaaag aaatcttcga gatttgcgat gccgttaccg
     3241 tttttcgtga cgggcaattt attgctgagc gcgaagtggc atcactgacc gaagattcgc
     3301 tgattgagat gatggtgggt cgcaagctgg aagatcaata tccacacctg gacaaagcgc
     3361 cgggagatat ccgcctgaaa gtcgataatc tctgcggacc tggcgttaac gatgtctctt
     3421 ttactttacg caaaggcgaa attcttggcg tctctggttt gatgggcgca ggtcgtaccg
     3481 aactgatgaa agtgctctac ggcgcactac cgcgcaccag cggttacgtc accctggatg
     3541 ggcatgaagt cgttacccgt tcaccgcagg atggcctggc aaacggcatt gtgtatatct
     3601 ccgaagaccg taaacgtgac ggtttagtgt tgggcatgtc agtaaaagag aacatgtcgc
     3661 tgacagcgct gcgctacttc agccgcgctg gcggcagttt gaagcatgcc gatgaacagt
     3721 aggctgtgag tgatttcatt cgtctgttta atgtgaaaac accgtcgatg gaacaggcaa
     3781 ttggtctgct ttccggtggc aatcagcaaa aagtgttgat ccttgatgaa cctacccgtg
     3841 gcgtagatgt cggcgcgaaa aaagagatct atcaactgat taaccagttc aaagccgatg
     3901 gcttgagcat cattctggta tcatcggaga tgccagaagt attaggcatg agcgatcgca
     3961 tcatcgtcat gcatgaaggg catctcagcg gggaatttac tcgtgagcag gccacccagg
     4021 aagtgttaat ggctgccgct gtgggcaagc ttaatcgcgt gaatcaggag taaaaaaatg
     4081 acaacccaga ctgtctctgg tcgccgttat ttcacgaaag cgtggctgat ggagcagaaa
     4141 tcgcttatcg ctctgctggt gctgatcgcg attgtctcga cgttaagccc gaactttttc
     4201 accatcaata acttattcaa tattctccag caaacctcgg tgaacgccat tatggcggtc
     4261 gggatgacgc tggtgatcct gacgtcgggc atcgacttgt ctgtaggttc tctgttggcg
     4321 ctaaccggcg cagttgctgc atctatcgtc ggcattgaag tcaatgcgct ggtggctgtc
     4381 gctgctgctc tcgcgttagg tgccgcaatt ggtgcggtaa ccggggtgat tgtagcgaaa
     4441 ggtcgcgttc aggcgtttat cgctacgctg gttatgatgc ttttactgcg cggcgtgacc
     4501 atggtttata ccaacggtag cccagtgaat accggcttta ctgagaacgc cgatctgttt
     4561 ggctggtttg gtattggtcg tccgctgggc gtaccgacgc cagtctggat catggggatt
     4621 gtcttcctcg cggcctggta catgctgcat cacacgcgtc tggggcgtta catctacgcg
     4681 ctgggcggca acgcgtcttt ctggtatcaa cgtcaataaa atcaaaatca tcgtctattc
     4741 tctttgtggt ctgctggcat cgctggccgg gaccattgaa gtggcgcgtc tctcctccgc
     4801 acaacccacg gcggggactg gctatgagct ggatgctatt gctgcggtgg ttctgggcgg
     4861 tacgagtctg gcgggcggaa aaggtcgcat tgttgggacg ttgatcggcg cattaattct
     4921 tggcttcctt aataatggat tgaatttgtt aggtgtttcc tcctattacc agatgatcgt
     4981 caaagcggtg gtgattttgc tggcggtgct ggtagacaac aaaaagcagt aataacgact
     5041 acaggacatc ttgaatatga acatgaaaaa actggctacc ctggtttccg ctgttgcgct
     5101 aagcgccacc gtcagtgcga atgcgatggc aaaagacacc atcgcgctgg tggtctccac
     5161 gcttaacaac ccgttctttg tatcgctgaa agatggcgcg cagaaagagg cggataagct
     5221 tggctataac ctggtggtgc tggactccca gaacaacccg gcgaaagagc tggcgaacgt
     5281 gcaggactta accgttcgcg gcaccaaaat tctgctgatt aacccgaccg actccgacgc
     5341 agtaggtaat gctgtgaaga tggctaacca ggcgaacatc ccggttatca ctcttgaccg
     5401 ccaggcaacg aaaggtgaag tggtgagcca cattgcttct gataacgtac tgggtggcaa
     5461 aatcgccggt gattacatcg cgaagaaagc gggtgaaggt gccaaagtta tcgagctgca
     5521 aggcattgct ggttcatccg cagcccgtga acgtggcgaa ggcttccagc aggccgttgc
     5581 tgctcacaag tttaatgttc ttgccagcca gcagattttg atcgcactaa aggtttgaac
     5641 gtaatgcaga acctgttgac cgctcatccg gatgttcagg ctgtattcgc gcagaatgat
     5701 gaaatggcgc tgggcgcgct gcgcgcactg caaactgccg gtaaatcgga tgtgatggtc
     5761 gtcggatttg acggtacacc ggatggcgaa aaagcggtga atgatggcaa actagcagcg
     5821 actatcgctc agctacccga tcagattggc gcgaaaggcg tcgaaaccgc agataaagtg
     5881 ctgaaaggcg agaaagttca ggctaagtat ccggttgatc tgaaactggt tgttaagcag
     5941 tagttttaat caggttgtat gacctgatgg tgacataaat acgtcatcga cagatgaacg
     6001 tgtaatataa agaaaagcag ggcacgcgcc accctaacac ggtggcgcat tttatggaca
     6061 tcccgaatat gcaaaacgca ggcagcctcg ttgttcttgg cagcattaat gctgaccaca
     6121 ttcttaatct tcaatctttt cctactccag gcgaaaccgt aaccggtaac cactatcagg
     6181 ttgcatttgg cggcaaaggc gcgaatcagg ctgtggctgc tgggcgtagc ggtgcgaata
     6241 tcgcgtttat tgcctgtacg ggtgatgaca gcattggtga gagcgttcgc cagcagctcg
     6301 ccactgataa cattgatatt actccggtca gcgtgatcaa aggtgaatca acaggtgtgg
     6361 cgctgatttt tgttaatggc gaaggtgaga atgtcatcgg tattcatgcc ggcgctaatg
     6421 ctgccctttc cccggcgctg gtggaagcgc aacgtgagcg tattgccaac gcgtcagcat
     6481 tattaatgca gctggaatca ccactcgaaa gtgtgatggc agcggcgaaa atcgcccatc
     6541 aaaataagac tatcgttgcg cttaacccgg ctccggctcg cgaacttcct gacgaactgc
     6601 tggcgctggt ggacattatt acgccaaacg aaacggaagc agaaaagctc accggtattc
     6661 gtgttgaaaa tgatgaagat gcagcgaagg cggcgcaggt actgcatgaa aaaggtatcc
     6721 gtactgtact gattacttta ggaagtcgtg gtgtatgggc tagcgtgaat ggtgaaggtc
     6781 agcgcgttcc tggattccgg gtgcaggctg tcgataccat tgctgccgga gataccttta
     6841 acggcgcgtt aatcacggcg ttgctggaag aaaaaccatt gccagaggcg attcggtttg
     6901 cccatgctgc agctgcgatt gccgtaacac gtaaaggcgc acaaccttcc gtaccgtggc
     6961 gtgaagagat cgacgtattt ttagacaggc agaggtgacg cttggctaca atgaaagatg
     7021 tttcccgcct ggcgggcgtt tctacctcaa cagtttctca cgttatcaat aaagatcgct
     7081 tcgtcagtga agcgattacc gccaaagttg aagcggcgat taaagaactc aattacgcgc
     7141 catcagccct ggcgcgtagc ctcaaactca atcaaacaca taccattggc atgttgatca
     7201 ctgccagtac caatcctttc tattcagaac tggtgcgtgg cgttgaacgc agctgcttcg
     7261 aacgcggtta tagtctcgtc ctttgcaata ccgaaggcga tgaacagcgg atgaatcgca
     7321 atctggaaac gctgatgcaa aaacgcgttg atggcttgct gttactgtgc accgaaacgc
     7381 atcaaccttc gcgtgaaatc atgcaacgtt atccgacagt gcctactgtg atgatggact
     7441 gggctccgtt cgatggcgac agcgatctta ttcaggataa ctcgttgctg ggcggagact
     7501 tagcaacgca atatctgatc gataaaggtc atacccgtat cgcctgtatt accggtccgc
     7561 tggataaaac tccggcgcgc ctgcggttgg aaggttatcg ggcggcgatg aaacgtgcgg
     7621 gtctcaacat tcctgatggc tatgaagtca ctggtgattt tgaatttaac ggcgggtttg
     7681 acgccatgcg ccaactgtta tcacatccgc tgcgtcctca ggccgtcttt accggaaatg
     7741 acgctatggc tgttggcgtt taccaggcgt tatatcaggc agagttacag gttccgcagg
     7801 atatcgcggt gattggctat gacgatatcg aactggcaag ctttatgacg ccaccattaa
     7861 ccactatcca ccaaccgaaa gatgaactgg gggagctggc gattgatgta ctcatccatc
     7921 ggataaccca gccgaccctt cagcaacaac gattacaact tactccgatt ctgatggaac
     7981 gcggttcggc ttagatttac gctgtctttt gatcaaatta ttaccatcgg ttgttttcag
     8041 aagcatgaac attgctgctg aagcaacagt aataatgccc atcgtgataa acgtatagtg
     8101 gaattgttcg acagtcgttg tgccttccat ccctttataa acgcgaagga cggccgcact
     8161 tacagcaacg cctaaactaa tcgacagttg ctgcgtgacc gccagaacac tgttaccgct
     8221 gctggcgttg tcatcggtca gatcggcaag tgtgatggta ttcatcgcgg taaattgcgt
     8281 cgacatagcc atccctaata taaacaacgg caagatcagc atccatatcg ccattgccgg
     8341 tgattgcaaa gagaactgag cgatcattag cccaataatc accgtgatcc ccactaacgt
     8401 atggcgatag cccagacgac gtaagacttg ggtaaccatc gattttgcaa taatggaacc
     8461 taacgctgtc ggtgccatca tacagccggc aataaacgcc tgataaccaa atcctacctg
     8521 taacatcaat ggcataagga acggtacact accggtcccc agacgggttg caatattgcc
     8581 tacgataccg atcgagaaag tgcgggtttt aaataaatct aatgaaatta atgggtttgg
     8641 cgtgtgtcgc gcatggagaa tatagagaag cagtaacccg atgctggtga caattaccgt
     8701 caaggcaatc cagctggcga caatcttttc cccgaatagc tctattccgc ttgagaagag
     8761 aacaaggctg aggccaaaca gcaaaaagcc agtgatatcg aatctgcgtc gtgcggtggt
     8821 gaaattgggc atatgtttgc gcgcgtaaag aaggcccgca atacctatgg ggatattgat
     8881 taaaaatatc cagtgccagg ttgcccaggt gaccagcacg ccgccaagaa cggggcctaa
     8941 aattggcccc accagacccg gcatggcgac aaaattcaat acaggaagaa gttcattacg
     9001 aggataagca cgcagtaagg ccagccgagc aacaggcatc atcattgcgc cgcctatccc
     9061 ctgaataacc cggaagacaa ccagctgtgg tagcgaatta gaaagtgcgc aggccagaga
     9121 acccaacgtg aacagactca cggcaagggt aaaaatgcga cgcgtaccga agcgatcggc
     9181 tagccatccg cttaccggaa taaacatcgc caccgtcagc gtataactga tgatggctga
     9241 ttgcattgcg agaggagaac gattaaggct atgagcgatt gcgggtaagg cggtattcag
     9301 aatagtggca tcaagtgcct gcatgaagaa ggccatcgcc gcgatccacg gcaaacccgc
     9361 catactacgc ttctttttat cgctcattca atgtcctgtt atcgggttat cacttatcag
     9421 gtgagcgtag cagcgcctga caagctttaa atgccgcgtc gccatcgctt tggataatcg
     9481 catcgacaat cgcctggtgc agatccagct ttatcactgt gtcgctggta attgacgtga
     9541 agtaagtgtg ataaaccgaa tggaatagcg aggcgaatga ggtcaaaaac ggattggcgc
     9601 tcatttcata gatatgctca tgccaggcca tatcgacttc gatccagcgt tcacggcgaa
     9661 agttcttttt taatgccgcc atttcggcca ttaacgtatt gagatgcgcc ttctgttccg
     9721 cggtgccaac cgttgctgcc agtaggcagg cttgcggctc cagacagata cgcataacca
     9781 gaaagtgatc gatgacctga tgaaagttct cttctgtcat ccaccaggta agcaattcct
     9841 gatcaagaaa attccagttt gattgtggca tgacccgggt accaattcgc ggtcgcggta
     9901 aaaccatccc ttttgccgtt aacgttttga ccgcttcgcg taccgctgta cgactcactc
     9961 caaattgctc gcccagctca atctcactag gcaaaatggt gccgggttca tattcacctt
    10021 ttaagatgcg ttgcgccagc ttctcagcca gaacatacga aaggtttttc tgtgcagcta
    10081 actgttgtgc gcttaaaggc attactaatc ttcctttttc tttttattcc tccttagtat
    10141 gccaccagga agtgtgatta cggttgcaaa aacggcaaat tgcttgtttt atggcacatt
    10201 aacggggctt ttgctgaaaa a
//
LOCUS       DADMHC010000143        10205 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.145, whole genome shotgun sequence.
ACCESSION   DADMHC010000143 DADMHC010000000
VERSION     DADMHC010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10205)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10205)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10205
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.145"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(265..1296)
                     /gene="rsmC"
                     /locus_tag="JNZ57_002976"
     CDS             complement(265..1296)
                     /gene="rsmC"
                     /locus_tag="JNZ57_002976"
                     /EC_number="2.1.1.172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1207)-N(2))-methyltransferase
                     RsmC"
                     /protein_id="HAY8829117.1"
                     /translation="MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRA
                     HTQQFHHGQVLSRQMGDNARFSLVATVDDVADCDTLIYYWPKNKPEAQFQLMNLLSLL
                     PVGTDIFVVGENRSGVRSAEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDADKFWG
                     EYSVDGLTVKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHS
                     PKIRLTLCDVSAPAVEASRATLAANYVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQ
                     TSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRA
                     IMTRQAKKG"
     gene            1399..1812
                     /gene="holD"
                     /locus_tag="JNZ57_002977"
     CDS             1399..1812
                     /gene="holD"
                     /locus_tag="JNZ57_002977"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit psi"
                     /protein_id="HAY8829118.1"
                     /translation="MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVAN
                     DLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSRCNSWRLGTDEPLSLEGAQ
                     VASPALTELRANPTARAALWQQICTYEHDFFPRND"
     gene            1781..2227
                     /gene="rimI"
                     /locus_tag="JNZ57_002978"
     CDS             1781..2227
                     /gene="rimI"
                     /locus_tag="JNZ57_002978"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HAY8829119.1"
                     /translation="MNTISSLETTDLPAAYHIEQRAHAFPWSEKTFASNQGERYLNFQ
                     LTQNGKMAAFAITQVVLDEATLFNIVVDPDYQRQGLGRVLLKHLIDELEKRGVATLWL
                     EVRASNAAAIALYESLGFNEATIRRNYYPTTDGREDAIIMALPISM"
     gene            2242..2919
                     /gene="yjjG"
                     /locus_tag="JNZ57_002979"
     CDS             2242..2919
                     /gene="yjjG"
                     /locus_tag="JNZ57_002979"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HAY8829120.1"
                     /translation="MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQA
                     VNKPLWVDYQNGAITSLQLQHGRFESWAERLKVEAGLLNDAFINAMAEICTPLPGAVS
                     LLNAIRGNAKIGIITNGFSALQQVRLERTGLRDYFDLLVISEEVGIAKPNKKIFDYAL
                     ELAGNPDRSRVLMVGDTAESDILGGINAGLATCWLNAHHREQPEGIAPTWTVSSLHEL
                     EQLLCKH"
     gene            3010..4599
                     /gene="prfC"
                     /locus_tag="JNZ57_002980"
     CDS             3010..4599
                     /gene="prfC"
                     /locus_tag="JNZ57_002980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HAY8829121.1"
                     /translation="MTLSPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAG
                     TVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRT
                     LTAVDCCLMVIDAAKGVEDRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVEN
                     ELKIGCAPITWPIGCGKLFKGVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAA
                     VGEDLAQQLRDELELVKGASNEFDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWA
                     PAPMPRQTDTRTVEASEDKFTGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQV
                     RTAKDVVISDALTFMAGDRSHVEEAYPGDILGLHNHGTIQIGDTFTQGEMMKFTGIPN
                     FAPELFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVFRPISNNDLIVGAVGVLQFDVVV
                     SRLKSEYNVEAVYESVNVATARWVECADAKKFEEFKRKNESQLALDGGDNLAYIATSM
                     VNLRLAQERYPDVQFHQTREH"
     gene            4992..5597
                     /gene="osmY"
                     /locus_tag="JNZ57_002981"
     CDS             4992..5597
                     /gene="osmY"
                     /locus_tag="JNZ57_002981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone OsmY"
                     /protein_id="HAY8829122.1"
                     /translation="MTMTRLKISKTLRAVMLTSAVATGSAYAENNAQTTNESAGQKVD
                     SSMNKVGNFMDDSAITAKVKAALVDHDNIKSTDISVKTEQKVVTLSGFVESQAQAEEA
                     VKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVE
                     TTDGVVQLSGTVDSQAQSDRAESIAKAVDGVKSVKNDLKTK"
     gene            5724..5885
                     /locus_tag="JNZ57_002982"
     CDS             5724..5885
                     /locus_tag="JNZ57_002982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002887716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HAY8829123.1"
                     /translation="MFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIILFLV
                     SLFMGRKRP"
     gene            6007..7080
                     /locus_tag="JNZ57_002983"
     CDS             6007..7080
                     /locus_tag="JNZ57_002983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin family protein"
                     /protein_id="HAY8829124.1"
                     /translation="MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLD
                     EFMRAQFNPFDLYLGTSAGAQNLSAFICNQPGYARKVIMRYTTKREFFDPLRFVRGGN
                     LIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVI
                     RASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQ
                     WFKRMERWLGDSSLQPLVNLVQHHETSYRDIQQFIEKPPGKLRIFEIYPPKPLHSIAL
                     GSRIPALREDYKLGRLCGRYFLATVGKLLTEKAPLTRHLVPVVTPESIVIPPAPVAND
                     TLVAEVIDAPQANDPTFNNEDLA"
     gene            7077..7859
                     /locus_tag="JNZ57_002984"
     CDS             7077..7859
                     /locus_tag="JNZ57_002984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313363.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HAY8829125.1"
                     /translation="MICRFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAE
                     NFARVQALAEKYQPLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEVGLDL
                     FGDDPQLERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLSRTGVVHGFS
                     GSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQG
                     QPNRPEQAVRVFDVLCELRPEPEDEIAEVLLNNTYALFSVSG"
     gene            complement(8073..8936)
                     /gene="yjjW"
                     /locus_tag="JNZ57_002985"
     CDS             complement(8073..8936)
                     /gene="yjjW"
                     /locus_tag="JNZ57_002985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjW family glycine radical enzyme activase"
                     /protein_id="HAY8829126.1"
                     /translation="MNSRCALVSKIIPFSCVDGPGSRLALFLQGCNLRCKNCHNPWTM
                     GRCNDCGECVPQCPHQALQIVDGKVLWNAVVCEQCDTCLKMCPQHATPMAQSMSVDEV
                     LSHVRKAVLFIEGITVSGGEATTQLPFVVALFTAIKNDPQLRHLTCLVDSNGMLSETG
                     WEKLLPVCDGAMLDLKAWGSECHQHLTGRDNQQIKRSICLLAERGKLAELRLLVIPDQ
                     VDYLHHIDELATFIKRLGDVPVRLNAFHTHGVYGEAQSWASATPEDVEPLADALKVRG
                     VSRLIFPALYL"
     gene            complement(8908..>10205)
                     /locus_tag="JNZ57_002986"
     CDS             complement(8908..>10205)
                     /locus_tag="JNZ57_002986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YjjI family glycine radical enzyme"
                     /protein_id="HAY8829127.1"
                     /translation="WLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPC
                     VRILTQDEIDVRIKRFWRYLDRTLPGAFMHANIGPPDSPITRAILRADAELKQVSPNL
                     TFIYDPEITPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSLPLAGG
                     GSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLV
                     KEGLINPERFVPMFGMYGLAEAVNLLCEKEGIAARYGKEAAVNEVGYRISAQLAEFVA
                     NTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDPIIHLQTVAPHHAYYYSGI
                     SDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYR
                     AEGSRTNTTWLGEEATRNTRILERQPRVISHEQQMRFSQ"
BASE COUNT         2409 a         2671 c         2749 g         2376 t
ORIGIN      
        1 ccatcaattc ttaaaaagaa ttgctaccac ggaggcgcat tctagtggtt ttcagctttt
       61 cgtcaatagt taattatcgc cggaggtgta attgctggaa aaatgtccat caggaaacta
      121 gcgtgcaggt ttggtaggca tgcgggggca gatgccagat gcgacgctgg cgcgtcttat
      181 ctggcctacg aagggctaac gtgcaggttt tgtaggtcgg ataaggcgtt tacgccgcat
      241 ccggcaaggc ttgcggcggg atacttaacc ttttttcgcc tggcgggtca taatggcgcg
      301 atataccttg aaacgcccgg tttgcgcaat cacttcatgg aagccaaatg tctcatccag
      361 cacgtccgga taaggcagga aggcgttcgc tacaattcgc agctcgccgc cactattaag
      421 atgacgcacc gcgccgcgaa tcagcgtttg cgccgcatcc aggctggttt gcatcccatc
      481 gtggaacggc gggttggaga tgatcatatc aaaacgacct ttcacctcgg aaaagacgtt
      541 gctggcaaag acttcacctt caacatagtt ggccgcaagt gttgcgcggc tggcttctac
      601 cgctggcgca gagacatcgc acaaggtgag acgaattttc ggcgaatggc gcgcaaaggc
      661 aactgaaagc acccccgcgc cacagccgac atccagcact ttacctttcg tgtgcggagt
      721 taacgtcgag agcagcaact ggctaccgac atccagaccg tcgcggctaa acacgccagg
      781 cagcgttttg accgtcaggc catcgacgct gtattcgccc cagaatttat cggcatcaaa
      841 taccggctgt ttttccagac gaccaaaata gaggccacag cgacgagcgc tgtcgacttt
      901 attcaacggc gcataatctg ccagcatctg ctcggcgctg cgcacgccgc tgcggttctc
      961 gccaacgaca aaaatatctg tccccactgg cagcagagaa agtaaattca tcaactggaa
     1021 ctgggcttcc ggtttgttct tcggccagta gtaaatcagc gtatcgcaat ctgcgacgtc
     1081 atccaccgtg gcgaccagac tgaaacgggc gttatccccc atctggcggc ttaatacctg
     1141 cccgtggtgg aattgctggg tatgagcacg gctggccgcg gtatctaaac gcgcgggcag
     1201 gtcatcctgt aagtctccgg caaacagaat acggctttgt tcgaaatcat cactgtgacg
     1261 cagcaagact tcacttgccg gggtaaatgc agacatggaa tgctcctcaa ttgatactgg
     1321 cggcgattat agccatatgt tggcgcggta tcgacgaatt tgctatattt gcgcccctga
     1381 caacaggagc gattcgctat gacatcccga cgagactggc agttacagca actgggcatt
     1441 acccagtggt cgctgcgtcg ccctggcgcg ttgcaggggg agattgccat tgcgatcccg
     1501 gcacacgtcc gtctggtgat ggtggcaaac gatcttcccg ccctgaccga tcctttagtg
     1561 agcgatgttc tgcgcgcatt aaccgtcagc cccgatcaag tgctgcaact gacgccagaa
     1621 aaaatcgcga tgctgccgca aggcagtcgc tgcaacagct ggcggttggg tactgacgaa
     1681 ccgctatcac tggaaggcgc tcaggtggca tcaccggcgc tcaccgaatt acgggcaaac
     1741 ccaacggcac gcgccgcgtt atggcaacag atttgcacat atgaacacga tttcttccct
     1801 cgaaacgact gatttaccag cagcttacca cattgaacaa cgcgcccacg cctttccgtg
     1861 gagtgaaaaa acctttgcca gcaaccaggg cgagcgttat ctcaactttc agttaacgca
     1921 aaacggcaaa atggcggcgt ttgcgattac gcaagtggtg ctggatgaag ctacattgtt
     1981 caatattgtg gtcgatcctg actatcagcg tcagggattg ggaagggtgc tgctgaaaca
     2041 tctgatcgac gaactggaaa aacgcggcgt ggcgacacta tggctggaag tccgtgcttc
     2101 aaacgctgcc gccattgccc tgtacgaaag tttaggcttt aacgaggcga cgattcgccg
     2161 caattactac cccaccacgg acggtcgcga agacgccatc atcatggcgt tgccaatcag
     2221 tatgtaagac aaggtggaat aatgaagtgg gattggattt tctttgatgc cgatgaaacg
     2281 ctgtttacct ttgactcatt caccggcctg cagcggatgt ttcttgatta cagcgtcacc
     2341 tttaccgctg aagattttca ggactatcag gccgttaaca agccactgtg ggtggattat
     2401 caaaacggcg cgatcacttc attacagctt cagcacgggc gtttcgagag ctgggccgaa
     2461 cggctgaaag ttgaagcagg cttgcttaac gatgccttta ttaatgcgat ggcggaaatc
     2521 tgcacgccgc tgccgggcgc ggtttctctg cttaacgcca ttcgtggcaa cgctaaaatc
     2581 ggcatcatca ccaacggttt tagcgccttg cagcaagtgc gtctggaacg gacgggcctg
     2641 cgtgattact ttgatttgct ggtgatttcc gaagaagttg gcattgccaa accgaataag
     2701 aaaattttcg attatgcgct ggaactggcg ggcaatcctg accgttcacg cgtgctgatg
     2761 gttggcgaca ctgccgagtc cgatattctc ggtggcatca acgccgggct tgcgacttgc
     2821 tggctgaatg cgcaccatcg cgagcaacca gaaggcatcg cgcccacctg gaccgtttca
     2881 tcgttgcacg aactggagca gctcctgtgt aaacactgat tgcctccccc ccgttgatgg
     2941 gtaaaatagc cgcaattttt cgttttcaac aagcgcggcg cgatgccgct tactcaagaa
     3001 gaaagaatta tgacgttgtc tccttatttg caagaggtgg cgaagcgccg cacttttgcc
     3061 attatttctc acccggacgc cggtaaaact accatcaccg agaaggtgct gctgttcgga
     3121 caggccattc agaccgctgg tacagtaaaa ggccgtggtt ccaaccagca cgctaagtcg
     3181 gactggatgg agatggaaaa gcagcgtggg atctccatta ctacgtctgt gatgcagttt
     3241 ccgtatcacg attgcctggt taacctgcta gacaccccgg ggcacgaaga cttctcggaa
     3301 gatacctatc gtaccctgac agcggtggac tgctgcctga tggttatcga cgctgcaaaa
     3361 ggtgttgaag atcgtacccg taagctgatg gaagttaccc gtctgcgcga cacgccgatc
     3421 ctcaccttta tgaacaaact tgaccgtgat atccgcgacc cgatggaact gctcgatgaa
     3481 gttgagaacg agctgaaaat cggctgcgca ccgatcacct ggccgattgg ctgcggcaag
     3541 ctgtttaaag gcgtttacca cctttataaa gacgaaacct atctttatca gagcggtaaa
     3601 ggccacacga ttcaggaagt ccgtattgtt aaagggctga ataacccgga tctcgacgct
     3661 gcggttggtg aagatctggc acagcagcta cgtgacgaac tggaactggt gaaaggcgcg
     3721 tctaacgagt tcgacaaaga actgttcctt gcgggcgaaa tcactccggt attcttcggt
     3781 actgcgctgg gtaacttcgg cgttgatcat atgctggatg gcctggtgga gtgggcccct
     3841 gcgccgatgc cgcgtcagac tgatacccgt accgtagagg cgagcgaaga caaatttacc
     3901 ggcttcgtat ttaaaattca ggccaatatg gacccgaaac atcgcgaccg cgtggcgttt
     3961 atgcgcgtag tatccggtaa atatgaaaaa ggcatgaagc tgcgccaggt gcgtactgcg
     4021 aaagatgtgg ttatctccga cgcgctgacc tttatggcgg gcgaccgttc gcacgttgaa
     4081 gaagcgtatc cgggtgatat cctcggcctg cacaaccacg gcactattca gatcggcgac
     4141 acctttaccc agggggagat gatgaagttc accggtattc cgaacttcgc accagaactg
     4201 ttccgtcgta tccgcctgaa agatccgctg aagcaaaaac agctgctcaa agggctggta
     4261 cagctttccg aagagggcgc ggtgcaggtg ttccgtccga tctccaacaa cgatttgatc
     4321 gttggtgctg ttggtgtgct gcagtttgat gtggtggtat cgcgcctgaa gagcgaatac
     4381 aacgttgaag cagtatatga atcagtcaac gttgccactg cccgctgggt agaatgtgcg
     4441 gacgcgaaga aattcgaaga gttcaagcgt aagaacgaaa gccaactggc gcttgatggc
     4501 ggcgataacc tcgcttacat cgctaccagc atggtcaacc tgcgcctggc gcaggaacgt
     4561 tatcccgacg ttcagttcca ccagacccgc gagcattaat tcttgcctcc agggcgcggc
     4621 agccgctgcg ccctgtcaat ttcccttcct tattagccgc ttacggaatg ttcttaaaac
     4681 attcactttt gcttatgttt tcgctgatat tacgagcggt ttcaaaattg tgatctatat
     4741 ttaacaaagt aatgacattt ctgacggcgt taaataccgt tcaatgcgta gatatcagta
     4801 tctaaagccg tcgattgtca ttctaccgat attaataact gattcagagg ctgtaatggt
     4861 cgttattcat cacccatcgc ttttgtgatg gcgaccattg acttctgtag agggtgaagt
     4921 ctctccctat tcagcaatgc aacctcgtgt tgccaggctc aaattacgag caaacataca
     4981 ggaataaatc gatgactatg acaagactga agatttcgaa aactctgcgg gctgtaatgt
     5041 tgacctctgc cgtcgcgacc ggctctgcct acgcggaaaa caacgcacag actaccaatg
     5101 aaagcgcagg gcaaaaagtc gatagctcta tgaataaagt cggtaatttc atggatgaca
     5161 gcgccatcac cgcgaaagtg aaggcggcgc tggtggatca tgacaacatc aagagcaccg
     5221 atatctctgt caaaaccgag caaaaagtcg tgaccctgag cggtttcgtt gaaagccagg
     5281 ctcaggccga agaggcagtg aaagtggcga aaggcgttga aggggtgacc tctgtcagcg
     5341 acaaactgca cgttcgcgac gctaaagaag gctcggtgaa gggctacgcg ggtgacaccg
     5401 ccaccaccag tgaaatcaaa gccaaactgc tggcggacga tatcgtccct tcccgtcatg
     5461 tgaaagttga aaccaccgac ggcgtggttc agctctccgg taccgtagat tctcaggcac
     5521 aaagtgaccg tgctgaaagt atcgccaaag cggtagatgg tgtgaaaagc gttaaaaatg
     5581 atctgaaaac taagtaattc gtcgtaattc gtcctcccga actttgtcgg gaggcgcgat
     5641 gtgcaccaca ctaaaaatat cgcattgagt gattttcacg ctcatatcaa gcggtgacat
     5701 taactatggt aaaggagacg cttatgtttc gttggggcat catatttctg gttatcgcgt
     5761 taatcgccgc cgcacttggg tttggtggtt tggccggtac cgctgcaggc gcagctaaaa
     5821 ttgtctttgt cgtcgggatt attctgttcc tggtgagttt gttcatgggc cgaaaacgac
     5881 cctagatttc agaccattaa gaaaatttta tccaaagcca gtccagcgga ctggcttttg
     5941 cggttttagc gaataataaa ttgcgttact ttgtcattct ttcacaacaa aaacaggaag
     6001 gcagaggtgg ggcagcgaat acctgtaacg cttggtaata ttgcgccgtt gtcgctaagg
     6061 ccgttccagc ctggacgaat agctctggtg tgcgaaggcg gcggacagcg tggaattttc
     6121 acggctggcg tgctggatga gtttatgcgc gcgcagttta atcctttcga tctttatctc
     6181 ggcacatctg ccggggcgca gaacctctcg gcgtttatct gcaatcagcc cggttacgcg
     6241 cgcaaagtca tcatgcgcta taccacaaaa cgcgaatttt tcgatccatt gcgctttgtc
     6301 cgtggaggaa atcttatcga tctcgactgg ctggtggagg ccaccgcaag ccagatgccg
     6361 ttgcaaatgg ataccgccgc gcggttgttt gacagcggca aatcgtttta tatgtgcgcc
     6421 tgtcgtcagg atgactacgc gcctaattac tttttaccaa ccaaacaaaa ctggctggat
     6481 gtgattcgcg cctccagtgc gatacctggc ttttatcgta gcggagtgtc gctggaaggc
     6541 attaactacc tggatggcgg gatcagtgat gcgattccgg ttaaagaggc ggcaaggcag
     6601 ggcgctaaaa cgttggtcgt cattcgcact gtgccgtcac aaatgtacta cacgccgcag
     6661 tggttcaaac gcatggaacg ctggctgggt gacagtagcc tgcagccgct ggtcaatctg
     6721 gtgcagcatc atgaaaccag ctatcgtgac attcagcaat ttattgagaa accaccgggc
     6781 aagctgcgga tattcgaaat ttatccgccg aagccattac atagtatcgc gcttggcagt
     6841 cggattccgg cgctgcgtga agactataaa cttgggcgtt tatgcggtcg ttatttcctc
     6901 gccacggttg gcaagctatt aactgaaaaa gcgccgctta cccgccatct ggtgccagtg
     6961 gtgacgccgg aatcgatcgt tattccgcct gcgccagtcg ccaacgatac gctggttgcc
     7021 gaagtgattg acgctccgca ggcgaacgac ccgacattta acaatgagga tctggcttga
     7081 tttgccgttt tatcgacacc cactgccatt ttgatttccc gccgtttagt ggcgatgaag
     7141 aggccagcct gcaacgcgcg gcacaagcgg gcgtaggcaa gatcattgtt ccggcgacag
     7201 aggcggaaaa ttttgcccgt gtgcaggcgt tagcggaaaa atatcaaccg ctgtatgccg
     7261 cattgggctt gcatccaggt atgttggaaa aacatagcga tgtgtctctt gagcagctac
     7321 agcaggcgct ggaaaggcgt ccggcgaagg tggtggcagt gggggaggtc ggtctggatc
     7381 tcttcggcga cgatccgcaa cttgagaggc agcagtggtt actcgacgaa cagctgaaac
     7441 tggcgaaacg ctacgatctg ccggtgatcc tgcattcacg gcgcacacac gacaaactgg
     7501 cgatgcatct taaacgccac gatttatcgc gcactggcgt ggttcacggt ttttccggca
     7561 gcctgcaaca ggccgagcgg tttgtacagc tgggctacaa aatcggcgta ggcggtacta
     7621 tcacctatcc acgcgccagt aaaacccgcg atgtcatcgc aaaattaccg ctggcatcgt
     7681 tgttgctgga aaccgacgcg ccggatatgc cgctcaacgg ctttcagggg cagcctaacc
     7741 gaccggaaca ggctgtgcgg gtgtttgacg tgctttgcga gttgcgcccg gaaccagaag
     7801 atgagattgc cgaagtgttg cttaataata cgtatgcgtt gtttagcgtt agtgggtagt
     7861 ttacccttcg taggcagcat ccggcagtcg gcgcataatg cctgatgcga ctcttgtcgc
     7921 gtcttatcat gcctacaggt ttgtgccgaa ccgtaggccg gataaggcgt tcacgccgca
     7981 tccggcagtt ggcgcacaat gcctgatgcg acgcttgtcg cgtcttatca tgcctacaag
     8041 tctgtgccga accgtaggcc gtatctggca tgtcacaaat agagcgccgg aaatatcaac
     8101 cggctcaccc cgcgcacctt taacgcatca gccaacggct caacgtcttc cggcgtggcg
     8161 ctcgcccagc tttgcgcctc gccatacacg ccgtgggtat gaaacgcatt caggcgaacc
     8221 ggaacatcgc caagtctctt gataaacgtc gccagctcat cgatgtgatg caaataatcc
     8281 acctggtctg gaattaccag caaacgcagt tccgccagct tgccgcgctc tgcaagcaaa
     8341 cagatgctgc gcttaatctg ctgattatcg cgtccggtta agtgttgatg acattcgctc
     8401 ccccacgctt tgagatcgag cattgcgccg tcacacaccg ggagtaattt ttcccagccg
     8461 gtttcgctca acatgccgtt actgtccacc aggcaggtga ggtggcgcag ttgcggatcg
     8521 tttttgatag cagtaaacag cgccactaca aacggcagtt gggtcgtggc ttcgccgccg
     8581 cttaccgtta tcccttcaat aaacagcacc gctttgcgga catggctaag cacttcgtcc
     8641 acgctcatgg attgcgccat tggcgtggca tgttgcggac acatcttcag gcaggtatca
     8701 cactgctcgc agaccacagc gttccacagc actttgccgt caacaatctg caacgcctga
     8761 tgcggacact gtggcacgca ctctccgcaa tcattgcagc gtcccatcgt ccacggattg
     8821 tgacagtttt tgcagcgcag attgcagccc tgcagaaaca gagccagacg actgcctggc
     8881 ccgtcaacgc aggagaaggg gataatctta ctgactaaag cgcatctgct gttcatggct
     8941 tatcacgcgc ggctggcgtt ccagaatacg agtgttgcgt gtggcttctt cgcccagcca
     9001 ggtggtgttg gtgcgtgaac cttcggcgcg atatttttct aaatccgaca aacgcaccat
     9061 ataaccggta acgcgaacca gatcgttacc gctgacattg gcggtaaatt cacgcattcc
     9121 ggctttaaag gcaccgaggc aaagctgtac cagcgcctgc ggattacgtt tgatggtttc
     9181 gtcgagcgtc agaatgtcgc tgatgccgga ataataataa gcatgatgcg gggcgacagt
     9241 ttgcagatgg atgatcggat ctggctcatc gccatacggc aaacgcgcgc ccggcgtggt
     9301 gccgatatcg gaactgatcc ccgactgtgc gtgtaacatg gcgcgttttt gccagccata
     9361 tttcacgggg gtattggcga caaactccgc cagttgcgcg ctgatgcgat aacccacttc
     9421 atttacggcg gcttctttac cgtagcgcgc ggcaatccct tctttctcac acagcaagtt
     9481 aaccgcttcc gccagcccat acatgccaaa cattggcaca aaacgttcag ggttaatcag
     9541 cccttctttc accaggaagc tattctcaaa gaagtgtgat tgttgataga ggaattcaca
     9601 ccgcgcatcg atgatggcga tctgctgctg gcagtagtgc ggtagagtgc gcgtaaagaa
     9661 gtcatccagc gattcgctgc gctcggcaat ggctttcagg ttaaggcgta ccagcgtgct
     9721 gccaccaccc gccagcggca gtgagttgta acagctcaca atcccgtagc ccccttttgt
     9781 gaaaatttta tcatgcaccg gaccgttggc gatgtgcggt ttgctacatt cacagatgtt
     9841 cttcgccact tccagcagca ggtcatcagg ggtgatttca ggatcgtaga taaaggtcag
     9901 gttcggtgaa acctgcttca actctgcgtc tgcacgtaag atcgcgcggg taatgggcga
     9961 atcaggcggg ccgatattgg cgtgcataaa ggcgcctggc agggttctgt cgaggtaacg
    10021 ccagaaacgt tttattcgaa catcgatctc gtcttgtgtt agaattctaa cacacggttg
    10081 caacaacgca tccagttgcc ccaggtagac cggcatcgat gtgaccgacg gtacgtggtg
    10141 gtaaagaatg gtcagcagag agagtgcgtc atcaagatct ttcgcgcctt ccagctccag
    10201 ccatt
//
LOCUS       DADMHC010000144        10177 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.146, whole genome shotgun sequence.
ACCESSION   DADMHC010000144 DADMHC010000000
VERSION     DADMHC010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10177)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10177)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10177
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.146"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(11..87)
                     /locus_tag="JNZ57_002987"
     tRNA            complement(11..87)
                     /locus_tag="JNZ57_002987"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(51..53),aa:Met,seq:cat)
     gene            complement(121..197)
                     /locus_tag="JNZ57_002988"
     tRNA            complement(121..197)
                     /locus_tag="JNZ57_002988"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(161..163),aa:Met,seq:cat)
     gene            406..1503
                     /gene="mltA"
                     /locus_tag="JNZ57_002989"
     CDS             406..1503
                     /gene="mltA"
                     /locus_tag="JNZ57_002989"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008785702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HAY8829128.1"
                     /translation="MKGRWVKYLLMGTVVAMLAACSSKSTDRGQQYKDGKFTQPFSLV
                     NQPDAVGAPINAGDFAEQINHIRNSSPRLYGNQSNVYNAVQEWLRAGGDTRNMRQFGI
                     DAWQMEGADNYGNVQFTGYYTPVIQARHTRQGEFQYPIYRMPPKRGRLPSRAEIYAGA
                     LGDKYILAYSNSLMDNFIMDVQGSGYIDFGDGSPLNFFSYAGKNGHAYRSIGKVLIDR
                     GEVKKEDMSMQAIRHWGETHSEAEVRELLEQNPSFVFFKPQSFAPVKGASAVPLVGRA
                     SVASDRSIIPPGTTLLAEVPLLDNNGKFNGQYELRLMVALDVGGAIKGQHFDIYQGIG
                     PEAGHRAGWYNHYGRVWVLKTAPGAGNVFSG"
     gene            1580..2386
                     /gene="tcdA"
                     /locus_tag="JNZ57_002990"
     CDS             1580..2386
                     /gene="tcdA"
                     /locus_tag="JNZ57_002990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HAY8829129.1"
                     /translation="MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSW
                     AAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRV
                     TVVDDFVTPDNVAQYMSAGYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQID
                     PTQIQVTDLAKTIQDPLAAKLRERLKSDFGVVKNSIGKLGVDCVFSTEALVYPQSDGT
                     VCAMKATAEGPKRMDCASGFGAATMVTATFGFVAVSHALKKMMAKAARQG"
     gene            complement(2437..2880)
                     /gene="csdE"
                     /locus_tag="JNZ57_002991"
     CDS             complement(2437..2880)
                     /gene="csdE"
                     /locus_tag="JNZ57_002991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase sulfur acceptor subunit
                     CsdE"
                     /protein_id="HAY8829130.1"
                     /translation="MTNPQFAGHPFGTTVTAETLRNTFAPLTQWEDKYRQLIMLGKQL
                     PALPDELKAQAKEIAGCENRVWLGYTVAENGKMHFFGDSEGRIVRGLLAVLLTAVEGK
                     TAAELQAQSPLALFDELGLRGQLSASRSQGLNALSEAIIAAAKQV"
     gene            complement(2880..4085)
                     /gene="csdA"
                     /locus_tag="JNZ57_002992"
     CDS             complement(2880..4085)
                     /gene="csdA"
                     /locus_tag="JNZ57_002992"
                     /EC_number="3.13.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase CsdA"
                     /protein_id="HAY8829131.1"
                     /translation="MNVFNPAQFRAQFPALQDAGVYLDSAATALKPEAVVEATRQFYS
                     LSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDDKTIVWTRGTTESINMVAQCYA
                     RPRLQPGDEIIVSVAEHHANLVPWLMVAQQTGAKVVKLPLNAQRLPDVDLLPELITPR
                     SRILALSQMSNVTGGCPDLARAITFAHSAGMVVMVDGAQGAVHFPADVQQLDIDFYAF
                     SGHKLYGPTGIGVLYGKSELLEAMSPWLGGGKMIHEVSFDGFTTQSAPWKLEAGTPNV
                     AGVIGLSAALEWLADYDINQAENWSHSLATLAEDALAKRPGFRSFRCQDSSLLAFDFA
                     GVHHSDMVTLLAEYGIALRAGQHCAQPLLAELGVTGTLRASFAPYNTKSDVDALVNAV
                     DRALELLVD"
     gene            4277..4504
                     /locus_tag="JNZ57_002993"
     CDS             4277..4504
                     /locus_tag="JNZ57_002993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417289.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgdI/YgdR family lipoprotein"
                     /protein_id="HAY8829132.1"
                     /translation="MKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTD
                     NDTGMISYKDANGNKQQINRTDVKEMVELDQ"
     gene            4855..5772
                     /locus_tag="JNZ57_002994"
     CDS             4855..5772
                     /locus_tag="JNZ57_002994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GcvA"
                     /protein_id="HAY8829133.1"
                     /translation="MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSL
                     EDFLGLKLFRRRNRSLLLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLP
                     SFAIHWLVPRLSSFNSAYPGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKL
                     YAEYLLPVCSPLLLTGEKPLKTPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGP
                     IFSHSAMVLQAAIHGQGVALANNVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQA
                     ELGKIAAFRQWILAKAAAEQEKFRFRYEQ"
     gene            5791..6186
                     /locus_tag="JNZ57_002995"
     CDS             5791..6186
                     /locus_tag="JNZ57_002995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HAY8829134.1"
                     /translation="MTSRFMLIFAAISGFIFVALGAFGAHVLSKTMGAVEMGWIQTGL
                     EYQAFHTLAILGLAVAMQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVT
                     PVGGVSFLAGWALMLVGAIRLKRKGVSHE"
     gene            6179..7279
                     /gene="rlmM"
                     /locus_tag="JNZ57_002996"
     CDS             6179..7279
                     /gene="rlmM"
                     /locus_tag="JNZ57_002996"
                     /EC_number="2.1.1.186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytidine(2498)-2'-O)-methyltransferase
                     RlmM"
                     /protein_id="HAY8829135.1"
                     /translation="MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIY
                     ECYQPDDGDKLIRELPFSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGE
                     LRVEVADTNESKELLKFCRKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYT
                     GYSYSNNNSPFYMGIPRLKFPAEAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDL
                     GACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVC
                     DMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINA
                     QIQARQLYHDREEVTVHVRRIWAAVGGRRDER"
     gene            complement(7323..8050)
                     /gene="fucR"
                     /locus_tag="JNZ57_002997"
                     /pseudo
     CDS             complement(7323..8050)
                     /gene="fucR"
                     /locus_tag="JNZ57_002997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417285.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose operon activator"
     gene            complement(8108..8530)
                     /gene="fucU"
                     /locus_tag="JNZ57_002998"
     CDS             complement(8108..8530)
                     /gene="fucU"
                     /locus_tag="JNZ57_002998"
                     /EC_number="5.1.3.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose mutarotase"
                     /protein_id="HAY8829136.1"
                     /translation="MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIR
                     ADGLLVSDLLQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDI
                     IRINRFAFYERAQKAFAIVITGERAKYGNILLKKGVTP"
     gene            complement(8532..9950)
                     /gene="fucK"
                     /locus_tag="JNZ57_002999"
                     /pseudo
     CDS             complement(8532..9950)
                     /gene="fucK"
                     /locus_tag="JNZ57_002999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417283.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculokinase"
     gene            complement(9947..10144)
                     /locus_tag="JNZ57_003000"
                     /pseudo
     CDS             complement(9947..10144)
                     /locus_tag="JNZ57_003000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000724154.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="l-fucose isomerase"
BASE COUNT         2421 a         2538 c         2687 g         2531 t
ORIGIN      
        1 caaatttgat tggttgcggg ggccggattt gaaccgacga ccttcgggtt atgagcccga
       61 cgagctacca agctgctcca ccccgcgtca ccgtactgct ttacttcatc aaattttaat
      121 tggttgcggg ggccggattt gaaccgacga ccttcgggtt atgagcccga cgagctacca
      181 ggctgctcca ccccgcgtcc gtggatgcgc actatactcc gctcgcgttt tcatgcaacc
      241 ttttttttac cccgatcacg gatttagcat gattttgaac aaaaacaaac cactaaagcc
      301 tattttttgt gcaaaatttg cgtcagggag aggctgctca tttcattaaa cgcggcggtt
      361 tgttatcttc gttgcgcctt attttttaac ctgaagaaga gaacaatgaa aggacgttgg
      421 gtaaagtacc ttcttatggg cacggttgtg gcaatgcttg ccgcctgctc ttccaaatca
      481 accgatcgcg gacagcaata taaagacggg aaatttaccc agcctttctc tctggtgaac
      541 cagccagatg ccgttggcgc gccgattaac gccggtgatt ttgccgagca aattaaccat
      601 atccgtaatt cgtcaccgcg tctgtatggc aaccagagta atgtttataa cgcggtgcaa
      661 gagtggctgc gcgcaggtgg tgatacccgc aatatgcgcc agttcggcat tgatgcctgg
      721 cagatggaag gtgccgacaa ctatggtaac gtgcagttta caggctatta cacgccggta
      781 attcaggcgc gccatacccg ccagggcgag ttccagtatc ctatttaccg tatgccgcca
      841 aaacgtggtc gtctgccgtc tcgtgcggag atctacgcgg gggcattggg cgataaatac
      901 atcctcgctt acagcaactc tctgatggat aacttcatta tggatgtgca gggtagtggg
      961 tatatcgact ttggtgatgg cagtccgctt aactttttca gctatgcagg gaaaaacggt
     1021 catgcctatc gcagcattgg taaggtgctg atcgaccgtg gcgaagtgaa aaaagaagat
     1081 atgtcgatgc aggcgattcg tcattggggc gaaacacaca gtgaagccga ggttcgcgag
     1141 ctgctggaac agaacccgtc tttcgtcttc tttaaaccgc aatcttttgc accggtgaaa
     1201 ggggcaagtg cggtgccgct ggttggccgt gcttctgttg cctccgatcg ttcaattatt
     1261 ccgccaggta ctaccttgct ggcagaagtg ccgctgctgg ataataacgg caaatttaac
     1321 ggtcagtacg aattgcgtct gatggtggcg ctggatgtcg gtggcgcaat caaaggccaa
     1381 cacttcgata tctatcaagg gatcgggccg gaagccggac atcgcgcagg ttggtacaac
     1441 cactatggac gtgtctgggt gctgaaaacc gccccgggcg caggtaacgt ctttagcggc
     1501 tgatgtgtta ttctgtatac cgtttttacg gatacgacag ggtgagggat aacctcaccc
     1561 tttttaattc tgaggtgcta tgtctgtggt aattagtgat gcatggcgtc agcgttttgg
     1621 tggcacagcg cgtctgtatg gtgaaaaagc gttgcaactg tttgctgacg cgcatatttg
     1681 tgtggttggt atcggtggtg tcggttcctg ggcggcggaa gcgctggcgc gcacggggat
     1741 tggcgcaatc acgcttatcg atatggatga tgtgtgcgtc accaatacca atcggcaaat
     1801 tcacgctctg cgcgataacg tcgggctggc aaaagcggaa gtcatggcgg agcgcattcg
     1861 ccagattaac ccggagtgcc gtgtaacggt ggtggatgat ttcgtgacgc cggataacgt
     1921 agcgcaatat atgagtgccg gttattcgta cgtgattgat gccattgata gtgtacgacc
     1981 caaagcggcg ctgattgctt attgtcggcg caataaaatc ccgctggtca cgaccggtgg
     2041 cgcgggtggg cagattgacc cgacgcagat tcaggttacc gatctggcga aaacgattca
     2101 ggacccgctg gcggcgaagt tgcgcgagcg cctgaaaagc gattttggcg tagtgaaaaa
     2161 cagtataggt aagctcggcg tggattgcgt gttttctact gaagcgctgg tgtacccgca
     2221 gtcagacggt acggtgtgtg cgatgaaagc cacggcagaa gggccgaagc ggatggattg
     2281 tgcatctgga tttggcgcgg caacgatggt gaccgccacc tttgggtttg ttgcggtttc
     2341 tcatgcgctg aagaagatga tggcgaaagc agcgcgtcag ggttaaacaa tcaggtcgga
     2401 tgcgacgcga acgtcttatc cgacctggtt ctgtgcttaa acctgcttcg ccgcagcgat
     2461 aattgcctcg cttaacgcat tcaacccctg gctgcgtgag gcgctaagct gcccacgcaa
     2521 tcccagctca tcaaacaatg ccagcggcga ctgtgcctgt aattcggcgg cggttttccc
     2581 ctcaacggca gtcaacaaca ccgccaacag gccgcgcaca atgcgccctt cgctgtcgcc
     2641 aaagaagtgc attttaccgt tttcagccac ggtatatccc agccagacgc ggttttcgca
     2701 tccggcaatc tctttagcct gcgcttttaa ctcgtctggc aaagccggaa gctgtttccc
     2761 cagcatgatc aactggcgat atttatcttc ccattgcgtc aacggtgcga aggtattgcg
     2821 taacgtttct gcggttacgg ttgtgccgaa cggatgtccg gcgaattgcg ggtttgtcat
     2881 taatccacca ataattccag cgcgcggtca acggcattca ccagcgcatc cacatcactc
     2941 tttgtattat atggcgcaaa agaggcgcgc agtgtgccgg ttacgcctaa ttctgccagt
     3001 agcggctgag cgcaatgttg cccggcccgc aaggcaatac cgtactccgc cagtagcgtc
     3061 accatatcgc tgtgatgaac gccagcaaaa tcaaaggcca gcaggctgga atcctggcag
     3121 cggaatgaac gaaagcctgg acgtttcgcc agcgcatctt ccgccagcgt tgctaagcta
     3181 tggctccagt tttcggcctg gttgatatcg taatctgcca gccattccag cgccgcgctt
     3241 aatcctatga caccagccac atttggcgtt cctgcttcca gtttccacgg cgcagattga
     3301 gtcgtgaagc cgtcaaaact cacttcgtga atcattttgc cgccacccag ccagggcgac
     3361 atcgcttcca gcagttctga tttgccatac agcacgccga tacccgtcgg gccatacagt
     3421 ttgtgaccag agaaagcata gaaatcgata tccagttgct gaacatccgc ggggaaatgc
     3481 accgccccct gagcaccatc aaccatcacc accatccctg ctgaatgagc aaaggtaatc
     3541 gctcgcgcca gatccgggca accgccagta acgttcgaca tctgactcaa cgccagaatc
     3601 cgactacggg gagtaatcag ttctggcaac aaatcgacat ccggcagtcg ctgcgcatta
     3661 agcggcaatt tcaccacttt ggctccagtt tgttgggcga ccatcagcca ggggacgagg
     3721 ttggcgtggt gttctgccac gctgacaata atctcatcgc ccggttgcag acgcggacgc
     3781 gcatagcatt gtgccaccat gttgatggat tcagtggtgc cgcgcgtcca gacgatagtt
     3841 ttatcatccg gtgcattcag taattgcgcc actttctctc gtgcagcttc ataacgcgcg
     3901 gtcaggcgtt gggcttcggc aaactggctg cgatggacgt ttccggcgct caggctgtaa
     3961 aactgtcgag tggcttcaac cacggcttca ggtttaagcg cggtcgcggc gctgtcgaga
     4021 tagacgcccg catcctgtag tgcgggaaac tgggcgcgaa actgcgcggg attaaaaacg
     4081 ttcatggtac tcctcggctt gatgcaccga tcgtgacgca aaattcactt tgatacaagg
     4141 agagtgctaa ccatcagaat tatctggata tcctggcgaa gccgcgtaag taacatatgc
     4201 tgaatagtgt taggcgttaa ttttagcctg ttaatcaata ctattaagat ttattaatcg
     4261 ctttaaggag aagatgatga aaaagactgc cgcaattatt tctgcctgta tgctgacttt
     4321 tgccctgagc gcctgttccg gttcgaacta tgtgatgcac accaatgacg gacgtaccat
     4381 cgtctctgac ggcaaaccac agactgataa cgataccggt atgatttcgt ataaagacgc
     4441 taatggcaac aaacagcaga tcaaccgtac tgacgtgaaa gagatggtcg aactggatca
     4501 gtaattcgcg atcgcaaggt aaaaaaaagc accgcaatta ggcggtgcta cattaatcac
     4561 tatggacaga cagggtaaat gtacaggaag tgaaaaaagg tagctttgct accatggtct
     4621 gaatcgcaga ccaattgcaa acacaacaac acaacatcac aaccgtaagc caaaagttca
     4681 ccagaacacg cattccgata aaacttttcg ttccggctca ggaagtgccg ccactatagg
     4741 tatttgctgg tagaagctca acggacaatt tataatggct cagattaaaa aaactaatag
     4801 gttacatagt gtgatctaat tgttaaattc atttaacatc aaagtttaat agccatgtct
     4861 aaacgattac caccgctaaa tgccttacga gtttttgatg ccgcagcacg ccatttaagt
     4921 ttcactcgcg cagcagaaga gctttttgtg acccaggccg cagtaagtca tcaaatcaag
     4981 tctcttgagg attttttggg gctaaaactg ttccgccgcc gtaatcgttc actcctgctg
     5041 accgaggaag ggcaaagcta tttcctcgat atcaaagaga tattttcgca attaaccgaa
     5101 gcgacgcgta aactccaggc ccgtagcgcc aagggggcgt tgacggtcag tttactcccc
     5161 agtttcgcca ttcattggtt ggttccgcga ctttccagct ttaattcagc ttatccggga
     5221 attgacgttc gaatccaggc ggttgatcgt caggaagata agctggcgga tgatgttgat
     5281 gtggcgatat tttatggtcg gggcaactgg ccggggctac gggtggaaaa actgtacgcc
     5341 gaatatttat tgccggtgtg ttcgccgcta ctgctgactg gcgaaaaacc cttgaagaca
     5401 ccggaagatc tggctaaaca tacgttatta catgatgctt cgcgccgtga ctggcagaca
     5461 tatacccgac agttggggtt aaatcatatc aacgttcagc aagggccaat ttttagccat
     5521 agcgccatgg tgctgcaagc ggctatccac gggcagggag tggcgctggc aaataacgtg
     5581 atggcgcaat ctgaaatcga ggccggacgt cttgtttgcc cgtttaatga tgttctggtc
     5641 agtaaaaacg ctttttatct ggtttgtcat gacagccagg cagaactggg taaaatagcc
     5701 gcctttcgcc aatggatcct ggcgaaagcc gctgctgaac aagaaaaatt ccgctttcgt
     5761 tatgaacaat aatttacgta gggtacgacc atgaccagcc gttttatgct gattttcgcc
     5821 gccattagcg gcttcatttt tgtggctctg ggcgcttttg gcgcgcatgt gttaagtaaa
     5881 accatggggg ccgttgagat gggctggatc cagaccggcc tcgaatacca ggcgtttcat
     5941 acgctggcga tcttaggtct ggcggtggca atgcagcgtc gcatcagtat ctggttttac
     6001 tggagtagcg ttttcctcgc gttaggcacg gtgttgttca gcggcagcct ttattgcctg
     6061 gcgctgtccc atctgcgttt gtgggcgttt gtcactccgg ttggcggcgt gagcttcctc
     6121 gcgggctggg cgttaatgtt agttggtgct atccgtttaa agcgcaaggg cgtaagtcat
     6181 gaataaggtt gtattgctgt gccgtccggg ctttgaaaaa gagtgcgccg cagaaattac
     6241 cgataaagcc ggccagcggg aaattttcgg ttttgcccgc gtgaaagaga atgcgggtta
     6301 tgtcatttat gaatgttatc aacctgatga tggcgataag ttaatccgtg agctgccgtt
     6361 cagttcatta atttttgccc gccagtggtt tgtggtgggg gaactcctgc agcatttgcc
     6421 gccagaagat cgtattaccc ccattgtcgg catgttacag ggcgtagtag agaagggcgg
     6481 agaactgcgt gttgaagttg ccgataccaa cgaaagcaaa gagttgctga aattctgccg
     6541 taaatttact gttccgctac gcgctgcctt gcgcgatgcc ggggtgctgg cgaactatga
     6601 aacgccgaag cgtccggttg tgcatgtatt ctttattgca ccaggctgct gctataccgg
     6661 ttactcatac agcaacaata attcgccgtt ctatatgggc attccgcgcc tgaaatttcc
     6721 ggcagaggcg ccgagtcgtt ccacgctcaa actggaagag gcatttcatg tgtttattcc
     6781 tgcggatgag tgggatgaac gcctggcgaa cgggatgtgg gcggtggatt taggcgcttg
     6841 ccctggcggc tggacctacc aactggtgaa gcgcaacatg tgggtttatt ccgtcgacaa
     6901 cggcccgatg gcgcaaagtc tgatggatac cgggcaggtg acgtggctgc gggaagacgg
     6961 tttcaaattc cgtccgacac gcagcaatat ctcctggatg gtatgcgata tggttgaaaa
     7021 accggctaaa gttgcggcat tgatggcgca gtggctggtt aatggctggt gccgtgaaac
     7081 cattttcaat ctcaaactgc cgatgaaaaa acgctacgaa gaagtatcac acaatctggc
     7141 gtatattcag gcacagcttg atgaacatgg cataaatgct cagattcagg cgcggcagtt
     7201 gtatcacgat cgcgaagaag tgacggtgca cgtccgccgc atctgggctg cggtgggtgg
     7261 tcgtcgcgac gagcgataac aggcaaggcc ggggcgtcgt cttcggcctg ctaccctttc
     7321 cgtcaggctg ttaccaaaga agttgcaacc tggcgctcat cagaaataat gtgcgttacc
     7381 tcatccagat gcccgatgcg ggcttcccct gaacgattaa atttactttt atcaatcaat
     7441 aacaacgatt gcgcggcacg ttttaatagc atcgatttgt aatcagcgtt gatcgcattg
     7501 gagtcccaca gtgcgccgct gctatcgatc ccttcacaag aaaaaataaa cagatcgatt
     7561 tccagcgatt taagttggga aatcagcgag ggattgacgt aacagccata tttgcgctca
     7621 agtgtgccgc cggaactgat cagttgaatg cgttcgcgtt taccgagttc atggcaaatc
     7681 ggatggctat tggtgaagac ctgaatgttg atgtcaggca actggcgtgc cagataccag
     7741 caagttgaac tggcgtctaa ggctatcacc atcccttctt caatccacgc gagcgcctcg
     7801 cgcgcgatat ctgctttatg cgcataatgg cttttcagcc tgatgtgaaa gggatcgcca
     7861 ctgtcttgat tttgacggtg gatatattta gcgcgtccat gattgcgcag aattttaccc
     7921 tgcgtctgta attcattgag atcggaatgg tttctttact gacctttagc tgttcagaga
     7981 gagcttccgt ggtcaggctg gtatggttca gcagcaggtc gactatcgct tgctggcgtg
     8041 ccgctttcat atttttcacc ccatcattcg ataaccgccc gcgtcatgcg ggcgtaccgg
     8101 tatgagatta cggtgttacc ccttttttta aaagaatatt cccgtacttc gctcgttcgc
     8161 ctgtgataac gatcgcaaag gctttttgcg cccgttcata aaacgcaaaa cgattgatgc
     8221 ggatgatgtc aggacacggg gcttgtagtg aaagcgcatt acggtaacgt cgttctactt
     8281 caggatcgag agtgtcacct tctaccgccg ccatcatcac cagcggcggt gcataactgt
     8341 ccagttcaaa taacgggata atcgcctgga gcaagtcgct caccaacagg ccatcagcgc
     8401 ggatcacctg cggtcccatc gaatgggcgg gaaagtgagc atcggaaaaa ataatttcat
     8461 ctccatgtcc catctctgcc agcactttca atagttcggg agaaattaac ggcgaaattg
     8521 ttttcagcat ttcacacttc ctctataaat tcaggttcag tttgcgggta gaaataacgg
     8581 tactgataat gaatctatgc gcgggcttct tcagggctgt taaattcccc tacgccatac
     8641 caaccgaaca gcgcagctcc tgcgacggtc gtttcggcgt cgtcgagaac ttttaccgga
     8701 atatcaagca tattggcttt aatctgattc cacaatgtgt tgcgacttcc tccaccgact
     8761 aacaataatt cagaggcctt aaagtgcccg attttttcca gcatctgtag attgcgctgt
     8821 aattgcgcag ttaacccttc cagcgccgcg cgatagaaat gcccccgcgt ggtattaagc
     8881 gtcactcctt gccagccagc gttctgacac gacaataaat cacactgcat ttttacgcca
     8941 tccgcgctag gcgcgatcag acgagcttct tcaatcaaca tttgccaggg tgtttcagcc
     9001 gtccagaaca gttttctcac ccattccagc acgccggatg ccagccattg catacctagg
     9061 ttatacaacc ctgcctggct atccagttcg caggtggaac cggcgtactg acttaacagc
     9121 gaagtatcaa cctaggcgct acggaccatt aaaatttccc atgtaccgga agagagcacg
     9181 ggttcatttt ggtcggcacc agcgccaaaa agggcgaact gggtatcgtg acctgcggaa
     9241 atcaccggta tgccaacggg taagccgagc attgctgcgg cgctgttctg tagcgtacca
     9301 atctgttcac ccgcttccac cagacgaggg aagagtcggc gtggaatacc agtggcttgt
     9361 aaaatttgcg gactgaaatc gcgttgctgg atatccagca tctggctggt tccggccatc
     9421 gtgatatcag tagtgaattc gccggttaaa cggtggttaa tcagcgacga aataaagaac
     9481 caggcgtgcg cgcgttccag cagttgtgga tgattttctt tcaaccacac caacttatat
     9541 aacgtattga aactaaaggc tccgacgcca gaaatagcct gcaaccgctg tgcggagatc
     9601 aactgttcaa tattgtccat aaccgctgct gttcgcggac atttccagct aatgatcgga
     9661 tagagcagat taccttgctt atctaccaga gcgccatcca caccaaaggt ggtgacggcg
     9721 ataccgcgga tgtggcattc agtcagttca ctattgattt gccgacagca atcagcaaag
     9781 cgttgcaaaa tggcgtctaa agaccactgg tgccaggtgt tgttttccat cgcgatatcg
     9841 ctggcattag gcgttgaggc gcgggcaaca atttttccct gccgattaac cgcgatggcc
     9901 ctgacattgg tcgcgccaca gtcgagtacc aggataactt cttgtttcat aatcgctcct
     9961 gcaatacttc aatatccatg ccgtgcgcag cccaggcaga aggacgatac actttggtct
    10021 cttcaacgtt gtgcatacat accgggatac gcagcatgga ggcgagagtg ataaagtcag
    10081 cgccaacgtg gccgatggtc agaaccccat ggttagcgcc ccagttcgcc attaccgagt
    10141 acacggtaat gactccaact tactgatagt gttttat
//
LOCUS       DADMHC010000145        10126 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.147, whole genome shotgun sequence.
ACCESSION   DADMHC010000145 DADMHC010000000
VERSION     DADMHC010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10126)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10126)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10126
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.147"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(1..1377)
                     /locus_tag="JNZ57_003001"
                     /pseudo
     CDS             complement(1..1377)
                     /locus_tag="JNZ57_003001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418493.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
     gene            1770..3206
                     /gene="nrfA"
                     /locus_tag="JNZ57_003002"
     CDS             1770..3206
                     /gene="nrfA"
                     /locus_tag="JNZ57_003002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming nitrite reductase cytochrome
                     c552 subunit"
                     /protein_id="HAY8829137.1"
                     /translation="MTRIKINARRIFSLLIPFFFFTSVHAEQTAAPAKPVTVEAKNET
                     FAPQHPDQYLSWKATSEQSERVDALAEDPRLVILWAGYPFSRDYNKPRGHAFAVTDVR
                     ETLRTGAPKNAEDGPLPMACWSCKSPDVARLIQKDGEDGYFHGKWARGGPEIVNNLGC
                     ADCHNTASPEFAKGKPELTLSRPYAARAMEAIGKPFEKAGRFDQQSMVCGQCHVEYYF
                     DGKNKAVKFPWDDGMKVENMEQYYDKIAFSDWTNSLSKTPMLKAQHPEYETWTAGIHG
                     KNNVTCIDCHMPKVQNAEGKLYTDHKIGNPFDNFAQTCANCHTQDKAALQKVVAERKQ
                     SINDLKIKVEDQLVHAHFEAKAALDAGATEAEMKPIQDDIRHAQWRWDLAIASHGIHM
                     HAPEEGLRMLGTAMDKAADARTKLARLLATKGITHEIQIPDISTKEKAQQAIGLNMEQ
                     IKAEKQDFIKTVIPQWEEQARKNGLLSQ"
     gene            3251..3817
                     /gene="nrfB"
                     /locus_tag="JNZ57_003003"
     CDS             3251..3817
                     /gene="nrfB"
                     /locus_tag="JNZ57_003003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418495.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase pentaheme
                     subunit"
                     /protein_id="HAY8829138.1"
                     /translation="MSVLRSLLTAGVLASGLLWSLNGITATPAAQASGDRYEVTQQRN
                     PDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEP
                     MYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRI
                     KICVDCHSDQRTNPNFNPASVPLLKEQP"
     gene            3814..4485
                     /gene="nrfC"
                     /locus_tag="JNZ57_003004"
     CDS             3814..4485
                     /gene="nrfC"
                     /locus_tag="JNZ57_003004"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase Fe-S protein"
                     /protein_id="HAY8829139.1"
                     /translation="MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDES
                     LCIGCTACMDACREVNKVPEGVSRLTIIRSEPQGEFPDVKYRFFRKSCQHCDHAPCVD
                     VCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNL
                     QAGKLPACVEACPTKALTFGNLDDPNSEISQLLRQKPTYRYKLALGTKPKLYRVPFKY
                     GEVSQ"
     gene            4482..5438
                     /gene="nrfD"
                     /locus_tag="JNZ57_003005"
     CDS             4482..5438
                     /gene="nrfD"
                     /locus_tag="JNZ57_003005"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase subunit NrfD"
                     /protein_id="HAY8829140.1"
                     /translation="MTQTSAFHFESLVWDWPIAIYLFLIGISAGLVTLAVLLRRFYPQ
                     AGGADSTLLRTTLIVGPGAVILGLLILVFHLTRPWTFWKLMFHYSFTSVMSMGVMLFE
                     LYMVVLVLWLAKIFEHDLLALQQRWLPKLGIVQKVLSLLTPVHRGLETLMLVLAVLLG
                     AYTGFLLSALKSYPFLNNPILPVLFLFSGISSGAAVALIAMAIRQRSNPHSTEAHFVH
                     RMEIPVVWGEIFLLVAFFVGLALGDDGKVRALVAALGGGFWTWWFWLGVAGLGLIVPM
                     LLKSWVNRSSGIPAVLAACGASLVGVLMLRFFILYAGQLTVA"
     gene            5458..7176
                     /locus_tag="JNZ57_003006"
     CDS             5458..7176
                     /locus_tag="JNZ57_003006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014640253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HAY8829141.1"
                     /translation="MDVFLPEVGFLALLLSLGVNVLTPLTAFAGVRLRWPAMMRLTCI
                     GILAQFALLLLAFGVLTYCFLISDFSVIYVAQHSYSLLSWELKLAAVWGGHEGSLLLW
                     VLLLSAWSALFAWHYRQQTDPLFPLTLAVLSLMLAALLLFVVLWSDPFVRIFPPAIEG
                     RDLNPMLQHPGLIFHPPLLYLGYGGLMVAASVALASLLRGEFDAASARICWRWALPGW
                     SALTAGIILGSWWAYCELGWGGWWFWDPVENASLLPWLSATALLHSLSLTRQRGIFRH
                     WSLLLAIVTLMLSLLGTLIVRSGILVSVHAFALDNVRAVPLFSLFALISLASLALYGW
                     RARDGGPAVRFSGLSREMLILATLLLFCAVLLIVLVGTLYPMIYGLLGWGRLSVGAPY
                     FNRATLPFGLLMLVVIVLATFVSGKRVQLPALVAHAGVLLFAAGIVVSSVSRQEISLN
                     LQPGQQVTLAGYTFRFERLDLQAKGNYTSEKAIVALFDHQQRIGELMPERRFYEARRQ
                     QMMEPSIRWNGIHDWYAVMGEKTGADRYAFRLYVQSGVRWIWGGGLLMIAGALLSGWR
                     GRKRDE"
     gene            7169..7552
                     /gene="nrfF"
                     /locus_tag="JNZ57_003007"
     CDS             7169..7552
                     /gene="nrfF"
                     /locus_tag="JNZ57_003007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfF"
                     /protein_id="HAY8829142.1"
                     /translation="MNKGLLTLLLLFTCFARAQVVDTWQFANPQQQQQALNIASQLRC
                     PQCQNQNLLESNAPVAVSMRHQVYSMVAEGKNEVEIIGWMTERYGDFVRYNPPLTGQT
                     LVLWALPVVLLLLMALILWRVRAKR"
     gene            7549..8145
                     /gene="nrfG"
                     /locus_tag="JNZ57_003008"
     CDS             7549..8145
                     /gene="nrfG"
                     /locus_tag="JNZ57_003008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfG"
                     /protein_id="HAY8829143.1"
                     /translation="MKEPKIPVKMLTTLTILMVFLCVGSYLLSPKWQAVHAEYQRQRD
                     PLHQFASQQTPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQL
                     RGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANY
                     AQAIELWQKVMDLNSPRINRTQLVESINMAKLLQRRSD"
     gene            8487..9800
                     /gene="gltP"
                     /locus_tag="JNZ57_003009"
     CDS             8487..9800
                     /gene="gltP"
                     /locus_tag="JNZ57_003009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate:proton symporter GltP"
                     /protein_id="HAY8829144.1"
                     /translation="MKNIKFSLAWQILFAMVLGILLGSYLHYHSDSRDWLVVNLLSPA
                     GDIFIHLIKMIVVPIVISTLVVGIAGVGDAKQLGRIGAKTIIYFEVITTVAIILGITL
                     ANVFQPGAGVDMSQLATVDISKYQSTTEAVQSSSHGIMGTILSLVPTNIVASMAKGEM
                     LPIIFFSVLFGLGLSSLPATHREPLVTVFRSISETMFKVTHMVMRYAPVGVFALIAVT
                     VANFGFSSLWPLAKLVLLVHFAILFFALVVLGIVARLCGLSVWILIRILKDELILAYS
                     TASSESVLPRIIEKMEAYGAPASITSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGID
                     LSIWQEIILVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRILDMA
                     RTALNVVGNALAVLVIAKWEHKFDRKKALAYEREVLGKFDKTADQ"
     gene            complement(9878..10126)
                     /locus_tag="JNZ57_003010"
                     /pseudo
     CDS             complement(9878..10126)
                     /locus_tag="JNZ57_003010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313087.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="sel1 repeat family protein"
BASE COUNT         2189 a         2586 c         2849 g         2502 t
ORIGIN      
        1 agaagtaggt ctgttcaaaa cgttcgtgat cgccaaacag cgtacgcgcc tgacccggcc
       61 aggagtcggt gatcaccagg ctgccttcgg tagcgccagg cagtggcgtg atcatgaaac
      121 cgccagtttc ggtctgccac caggtatcga ccaccggaca tttctcgttg ccgatttttt
      181 tccagtacca ctcccacgct tccgggttaa ttggctcgcc cacggaaccg agaatgcgca
      241 gcgacgaacg gtcggtaccc tcgatcgctt tatcgccttc cgccatcagc gcgcggatcg
      301 ccgtgggtgc ggtatagaga atattgacct gatgcttgtc caccacctgc gccatacggg
      361 caggcgtcgg ccagttgggt acgccttcaa acatcagcgt ggtcgcaccg caggccagcg
      421 ggccgtacag caagtaactg tgtccggtca cccagcccac atcggcggtg caccagtaga
      481 tatcacccgg atgataatca aagacatatt taaaggtcag cgccgcgtac accagataac
      541 cgccggtagt atgcagcaca ccttttggct taccggtaga accggaggtg tagagaataa
      601 acagcggatc ttcggcgttc atctcttccg cctggtgctg atcgctcgct tgctcaacca
      661 ggtcgtgcca ccacaggtcg cgcccttcct gccagtcaat tttcccgcca gtacgcttca
      721 gtaccaccac atgctctacg ctggtgacgt tcgggttttt cagcgcgtca tcaacgtttt
      781 tcttcagcgg aatactgcgc ccggcacgca caccttcgtc ggaagtgatc accagtcgtg
      841 agttggaatc aataatgcgc ccggcaacgg cttccggcga gaagccgccg aaaatcaccg
      901 aatgcaccgc gccaatgcgg gcgcaggcca gcatcgcaac cgcggcttcc ggcaccatcg
      961 gcatataaat cgccaccaca tcaccttttt taatgcccag ctcgagcagg gtattggcga
     1021 agcggcagac gtcgcggtgc agctctttat agctgatatg tttgctctgg ctgccgtcgt
     1081 cgccttccca gatgatggcg gtacgatcgc cgttttcttg cagatggcgg tcaaggcagt
     1141 ttgccgccag attcagcggc cgtcctcgta ccatttaatg gacacattac cgggggcaaa
     1201 ggaggtgttt ttcaccttct ggtaaggttt gatccagtca agaatttttc cctgttcgcc
     1261 ccagaaggta tcaggtacgt taatagattg ttgatacatt gcctcgtact gctgagggtt
     1321 tatcaggcaa cggtctgcga tgttggcagg aatggtgtgt ttgtgaattt ggctcatgct
     1381 tttgttctcc ttgtagaata ttaataatat gtggcatagg cgttaaatgt aggggtattg
     1441 gcagttttgt ttagtatttg ggcgacagat cacgcaaaag tagaattgtg caaataaacg
     1501 gcagggtaat ttttgaaggt cagcaacaaa agttgattaa ttctttgagg aacatgcagt
     1561 tatgcatgct gttgaaaaag aggaagatac tgactaactc taaaatggta ttttacatgc
     1621 acttacaatt gattaaagac aacattcaca gtgtggttat ttgttacaca taggggcgag
     1681 caatgtcatg acagtgtagg tgcggttact gtcgtgaaaa acaataaaaa ccgccattgc
     1741 aacaatggcg caattcggat gaagccccta tgacaaggat aaaaataaac gcacgccgta
     1801 tcttcagctt attgattcct tttttctttt tcacttctgt tcacgctgaa caaacggcag
     1861 ctcccgcaaa acctgtaact gtggaagcga agaatgaaac ctttgccccg cagcatcccg
     1921 atcaatatct ctcctggaaa gccacctcgg aacagtcaga gcgtgttgac gccctggcgg
     1981 aagatccacg gctggtgatc ctgtgggcgg ggtatccctt ctcgcgcgat tacaacaagc
     2041 cgcgtggaca tgcctttgct gtgaccgatg tgcgtgaaac cctgcgtacc ggtgcgccga
     2101 aaaacgctga agatggtccg ctaccgatgg cgtgctggag ttgtaaaagc ccggatgtgg
     2161 cgcgtctgat ccagaaagac ggcgaagatg gctacttcca cggtaagtgg gcgcgcggcg
     2221 gcccggaaat cgtcaacaac ttaggttgtg ccgactgcca taacaccgcc tcaccagagt
     2281 tcgccaaagg caaaccggag ttaacccttt cccgtccgta tgcggctcgc gcgatggaag
     2341 ccattggtaa accttttgag aaagccggac gtttcgacca gcaatcgatg gtttgcggtc
     2401 agtgccatgt ggagtattac ttcgacggca aaaacaaagc ggttaaattc ccgtgggatg
     2461 acggcatgaa agtcgaaaat atggagcagt attacgacaa aattgccttc tctgactgga
     2521 ctaactccct gtcgaaaacg ccaatgctga aagcgcagca cccggaatat gaaacctgga
     2581 cagcgggcat tcacggtaaa aacaacgtga cctgtatcga ctgccatatg ccaaaagtgc
     2641 agaacgccga aggcaaactc tacaccgacc ataaaattgg taatccgttt gataacttcg
     2701 cccagacttg tgcgaactgc catacccagg acaaagctgc cttgcaaaaa gtggtcgcgg
     2761 aacgtaagca gtcgattaac gacctgaaaa tcaaggttga agatcaactg gttcacgctc
     2821 acttcgaagc gaaagcagcg ctggatgcag gcgcgacgga agctgaaatg aagccaattc
     2881 aggacgatat ccgtcatgcc cagtggcgct gggatctggc gatcgcttcc cacggcattc
     2941 atatgcacgc accggaagaa ggtttacgga tgctcggtac ggcgatggat aaagcggcgg
     3001 atgcacgcac caaactggcg cgcctgctgg cgaccaaagg catcacccat gaaatccaga
     3061 tcccggatat ctcaaccaaa gagaaagccc agcaggccat tggcctgaac atggaacaaa
     3121 tcaaggccga gaagcaggac ttcatcaaaa cggtgatccc gcagtgggaa gaacaggcac
     3181 gtaaaaacgg tctgttaagc caataacccc gttccgcctc gcaaggggcg gaaaacacaa
     3241 tggagtgaat atgagcgtat tacgttcgtt attaactgct ggggtgctgg cgtcgggcct
     3301 gttgtggagc ctgaacggaa ttaccgctac ccctgcggcg caggcatctg gtgatcgcta
     3361 cgaagttacc cagcagcgta acccggatgc cgcctgtctg gactgtcata aaccagatac
     3421 cgaaggtatg catggcaaac atgcttccgt tatcaacccg aataacaaat tgccggtcac
     3481 ctgcaccaac tgtcacggcc agccatcacc gcaacaccgc gaaggggtga aagatgtgat
     3541 gcgctttaac gagccgatgt acaaggtcgg agagcagaac agcgtctgta tgtcctgtca
     3601 tctgccggaa cagttgcaaa aagcgttctg gccgcacgat gtccacgtaa ccaaagtggc
     3661 gtgcgccagc tgccattccc tgcatccaca gcaagatacg atgcagacgt taagtgacaa
     3721 aggacggatt aagatttgcg tcgattgcca cagcgatcag cgcaccaatc cgaactttaa
     3781 cccggcgtct gttccgttgc ttaaggagca gccatgacct ggtctcgtcg ccagtttctc
     3841 accggcgtcg gcgtgctggc agccgtcagc ggcaccgcag ggcgcgtggt ggcgaaaacg
     3901 ttgaatatca atggggtgcg ttacggcatg gtgcatgacg agtcgttatg catcggctgt
     3961 accgcctgta tggatgcttg tcgagaagtg aacaaggtgc cggaaggcgt ctcgcgcctg
     4021 acgattattc gtagcgagcc gcagggcgaa tttcctgatg tgaaatatcg cttcttccgt
     4081 aagtcttgcc agcactgcga tcatgcgccg tgcgttgacg tctgcccgac cggtgcgtct
     4141 tttcgtgatg ccgctagcgg gattgtcgat gttaatcctg atctctgcgt cggttgtcag
     4201 tactgcatcg ccgcctgtcc gtaccgcgtg cgctttatcc atccggtcac gaagacggcg
     4261 gacaaatgcg atttctgccg taaaaccaat ttgcaggccg gtaagctgcc cgcgtgcgtt
     4321 gaggcttgcc cgacgaaggc gctgacgttt ggcaatctgg acgatcctaa cagtgagatt
     4381 tcgcaactgc tgcgccagaa gcctacttac cgctacaagc tggcgctggg aaccaaaccg
     4441 aagctgtacc gcgtaccgtt taaatacggg gaggtgagcc aatgacgcag acttccgcat
     4501 ttcattttga atcgctggtg tgggactggc cgattgccat ctacctgttt ttgattggta
     4561 tttctgccgg tctggtgacg ctggccgtgc tgttacgtcg cttctacccg caggcgggcg
     4621 gtgcagacag tacgttgctg cgcaccacgc tgattgtcgg gccgggcgcg gtgatcctcg
     4681 gtctgttgat cctcgtcttc cacctgacaa gaccgtggac cttctggaag ctgatgttcc
     4741 actacagttt tacctcggtg atgtcgatgg gggtgatgct gtttgagctt tacatggtgg
     4801 tgctggtgct gtggctggcg aaaatctttg aacatgattt gcttgccctg caacaacgct
     4861 ggttgccgaa gctggggatc gtgcaaaagg ttctgagcct gctgacgccc gttcatcgcg
     4921 gactggaaac gctgatgctg gtgttggcgg tgctgctggg ggcttatacc ggctttctgc
     4981 tgtcggcgct gaaatcgtat ccgttcctca ataacccgat cctgccggtg ctgttcctct
     5041 tctccggcat ctcgtccggt gcggcggtgg cgctgatcgc catggcgata cgccaacgca
     5101 gtaacccgca ttccacggaa gcgcactttg ttcaccggat ggaaatcccc gtggtatggg
     5161 gtgaaatctt cctgctggtg gcgttttttg tcggtctggc gctgggcgat gacggtaaag
     5221 ttcgtgcgct ggtggcggca ttaggtggcg gtttctggac gtggtggttc tggcttggtg
     5281 tcgccgggct ggggctgatt gtgccaatgt tgctcaaatc gtgggtcaat cgcagttccg
     5341 gcattcctgc cgtgctggcg gcgtgtgggg ccagtctggt cggcgtgttg atgctgcgct
     5401 ttttcattct ctacgccgga cagttgacgg tggcgtaagc cagaaaagag gtggtttctg
     5461 gacgtattcc ttcctgaagt cggttttctg gcgttgttgt taagtctcgg ggtcaacgtg
     5521 ttgaccccgt tgacggcctt tgcgggagtg cggttgcgct ggcctgccat gatgcgactc
     5581 acttgcatcg gcattctggc gcagttcgcg ctcctgctgc tcgcctttgg cgtactgacg
     5641 tattgttttc tcatcagcga tttctcggtc atttatgtcg cccaacatag ctacagcctg
     5701 ctgtcgtggg aactcaaact ggcggcggtg tggggcggtc atgaaggttc gctgctgctt
     5761 tgggtgctgc tgctttccgc ctggagcgcg ctgtttgcct ggcattatcg gcagcaaacc
     5821 gatccgctat ttccgctgac gctagccgtt ttatctctca tgctcgccgc actgctactg
     5881 tttgtggtgc tgtggtccga tcccttcgtg cggatatttc caccagcaat cgaaggccgc
     5941 gatctcaatc cgatgctgca acatcccggt cttatctttc atccaccgct gctttacctt
     6001 ggctatggcg gtttgatggt agcggcgagc gtggcgctgg cgagtctact gcgcggcgag
     6061 tttgatgcgg ccagcgcccg aatttgctgg cgctgggcgt tacctggctg gagtgcatta
     6121 acggcgggga tcatcctcgg ttcctggtgg gcctactgcg aactcggctg gggcggctgg
     6181 tggttctggg atccggtgga aaatgcctct ttattaccct ggctttctgc cactgcgctg
     6241 ctgcacagtt tatccctgac acgccagcgg gggatttttc gccactggtc gctgttactg
     6301 gcgatagtta ctctgatgct gtcgctgctg ggcaccttaa ttgtccgttc tggcattctg
     6361 gtttcggttc atgcgttcgc gctggataac gtccgcgccg tgccgttgtt cagcctgttt
     6421 gcactgatta gccttgcgtc tctggctctg tatggctggc gagcgcggga cggtggcccg
     6481 gcggtgcgtt tttcggggtt atcgcgggaa atgttaatcc tcgctacgct gttgctgttt
     6541 tgcgcagtgc tactgatcgt gctggtggga acgctttatc cgatgattta cggtctgctg
     6601 ggctggggac gcctctccgt tggcgcgccg tattttaacc gcgcgacgtt accgtttggt
     6661 ctgttgatgc tggtggtgat tgtgctggcg acgtttgtct ctggcaaacg cgtgcagctt
     6721 ccggcgctgg tagctcatgc gggcgtgctg ttatttgccg ctgggatcgt ggtttccagc
     6781 gtcagccgtc aggagatcag cctgaattta cagccgggtc agcaggtgac gctggcagga
     6841 tacaccttcc gttttgagcg cctcgatctg caagccaaag gcaattacac cagcgaaaaa
     6901 gcgatagtgg cactgtttga ccatcagcaa cgcattggtg aactgatgcc ggagcggcgt
     6961 ttttacgaag cacgtcgtca gcaaatgatg gaaccgtcaa ttcgctggaa cggcatccat
     7021 gactggtatg cggtcatggg tgaaaaaacc ggagcggatc gttacgcttt tcgcttgtat
     7081 gtacaaagcg gtgtgcgctg gatctggggg ggaggattgt tgatgattgc gggcgcattg
     7141 ttaagcggat ggcgggggag gaagcgcgat gaataaagga cttctcacgc tactgctgtt
     7201 atttacctgt tttgcgcgcg ctcaggtcgt agacacctgg caattcgcca atccgcaaca
     7261 acagcaacag gcgttaaata ttgccagcca gttacgttgt ccgcagtgcc agaatcaaaa
     7321 cttactggaa tccaacgcgc cggtggcagt cagtatgcgc catcaggttt acagcatggt
     7381 ggcggagggg aagaacgaag tcgaaatcat tggctggatg accgaacgct acggagattt
     7441 tgttcgctat aacccaccgt taacgggtca gacgctggtg ttgtgggcgc tgccagtggt
     7501 gttgttactg ctgatggcac tgatcctctg gcgagtgagg gcgaagcgat gaaagagccc
     7561 aaaataccgg tgaaaatgct gacaacactc acgattttga tggtatttct ctgtgtcggc
     7621 agttatctgt taagtccaaa atggcaggcg gtacatgcgg aatatcagcg tcagcgcgat
     7681 ccgctacatc agtttgccag ccagcaaacc ccggaagcgc agcttcaggc attgcaggat
     7741 aaaatccgcg ctaatccaca aaacagcgaa caatgggcgt tactgggcga gtactatctg
     7801 tggcaaaacg attacagcaa ttcgctgctg gcgtaccgtc aggcgttgca actacgtggt
     7861 gagaacgctg aactgtatgc ggcgctggcg acggtgcttt attaccaggc cagccagcat
     7921 atgaccgccc agactcgcgc aatgatcgac aaagccctcg cgctggactc taacgaaatc
     7981 accgctctga tgctgctggc ttccgatgcg tttatgcagg cgaattacgc gcaagccatc
     8041 gaactatggc aaaaagtgat ggatctcaac tcaccccgga tcaaccggac acagctggtc
     8101 gagtcgatta atatggcgaa attgttgcag cggagatcgg attaatcatc tggtgatgaa
     8161 gattatgtta ttgagctgca taaaaaataa tcgaatgaac atatgccaaa aataatcact
     8221 aatcagtatt attgcagatt aaacaaataa aaatctttcc ataacaaatg gttattcatt
     8281 aatcctgaca taaactcgcg ttattatgca ttaatgcagc gaaaagctct gttgttaaag
     8341 ggttgcgcaa cataccgcgc aaatgatact gatcataagc gttaaaaaaa tctacaaacc
     8401 aacgcaacac aattcatgcc ctggcagtat gtcacgttct cgcgtttctg aacggggaac
     8461 ggcgctccat tgaggaagtt attctgatga aaaatataaa attcagcctg gcctggcaga
     8521 ttctgtttgc tatggtgctg ggcattctcc tgggaagcta cctgcactac catagcgaca
     8581 gccgcgactg gctggtcgtc aatttgctct ctccggcggg tgatatcttc atccatctga
     8641 ttaaaatgat tgttgtgccg attgtgatct ccacgctggt ggtgggtatc gcgggtgtgg
     8701 gtgatgccaa acagctcggg cgtattggcg cgaaaaccat tatttacttc gaggtgatca
     8761 ccaccgtcgc catcattttg gggatcactc tggcgaacgt cttccagccc ggtgccgggg
     8821 tggatatgtc gcagctggcg accgtcgata tctcgaaata tcagagcact acggaagcgg
     8881 tacaaagcag ttcccacggc attatgggca cgattttgtc gctggtgccg acgaacattg
     8941 tggcgtcgat ggcgaaaggc gaaatgctgc cgatcatctt cttctcggtg ctgtttggtc
     9001 tggggctttc ctccctgccc gcgacgcatc gtgaaccgct ggtgaccgtg ttccgctcca
     9061 tctctgaaac catgtttaaa gtgactcaca tggtgatgcg ttatgcaccg gtgggtgtgt
     9121 ttgcgctgat tgcggtgacg gtggctaact ttggtttctc ttctctgtgg ccactggcga
     9181 aactggtgct gctggtgcat ttcgccattc tgttcttcgc gctggtagtg ctgggaattg
     9241 tggcgcgcct gtgcgggtta agcgtctgga tcctgattcg tattctgaaa gatgagctga
     9301 ttctggcgta ctccactgcc agctctgaaa gcgtactgcc gcgaattatt gagaagatgg
     9361 aagcctacgg agcaccggcg tcgatcacca gcttcgtggt gccgaccggt tactctttta
     9421 accttgatgg ttcgacgctg tatcaaagta ttgccgctat tttcatcgct cagctgtatg
     9481 gcattgacct gtccatctgg caggaaatca ttctggtgct gacgctgatg gtgacctcga
     9541 aagggattgc tggcgtgccg ggcgtgtcgt ttgtggtgtt gctggcaacg ctgggtagcg
     9601 taggtattcc gctggaaggt ctggcgttta ttgctggtgt tgaccgtatc ctcgacatgg
     9661 cgcgtactgc gctgaacgtg gtgggtaatg cgctggcggt gctggtgatt gccaagtggg
     9721 aacacaaatt tgaccgcaaa aaggcgctgg cttatgagcg tgaagtgctg ggcaaatttg
     9781 ataaaactgc ggatcaataa ttgaagattg ccggggttat ccacccggca atgtgtggat
     9841 gcctgatgcg acgctggtgc gtcttatcag gcctacctta accgttggtt aatttttcaa
     9901 actcttcaca ccggtatcaa acccttccat acagctcagg ttcaaccagt gcagcgcctt
     9961 ttgtttgttc ttctcgataa aaccttcttc accgtttaag aacatcattc ccgcccagta
    10021 ctcggaataa ccggttcggg aaattgcaga gctgcgtttg aaataccagg ttgccttgtc
    10081 atcgtcggtc ttaatgccca cgccgttggc gtaaatcaaa ccaagc
//
LOCUS       DADMHC010000146        10120 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.148, whole genome shotgun sequence.
ACCESSION   DADMHC010000146 DADMHC010000000
VERSION     DADMHC010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10120)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10120)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10120
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.148"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            204..356
                     /gene="hokA"
                     /locus_tag="JNZ57_003011"
     CDS             204..356
                     /gene="hokA"
                     /locus_tag="JNZ57_003011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001135724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokA"
                     /protein_id="HAY8829145.1"
                     /translation="MPQKYGLLSLIVICFTLLFFTWMVRDSLCELHIKQGRYELAAFL
                     ACNLKE"
     gene            complement(543..755)
                     /gene="cspA"
                     /locus_tag="JNZ57_003012"
     CDS             complement(543..755)
                     /gene="cspA"
                     /locus_tag="JNZ57_003012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone/antiterminator CspA"
                     /protein_id="HAY8829146.1"
                     /translation="MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKS
                     LDEGQKVSFTIESGAKGPAAGNVTSL"
     gene            complement(1036..1326)
                     /locus_tag="JNZ57_003013"
     CDS             complement(1036..1326)
                     /locus_tag="JNZ57_003013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator"
                     /protein_id="HAY8829147.1"
                     /translation="MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKG
                     TGLKIDDFARVLGISVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME"
     gene            1759..2469
                     /locus_tag="JNZ57_003014"
     CDS             1759..2469
                     /locus_tag="JNZ57_003014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3053 domain-containing protein"
                     /protein_id="HAY8829148.1"
                     /translation="MATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNT
                     VMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQ
                     DYVTQSGPLREMNGSLGVLAQQLQNAKLQADAAHSALKQTDDLKPVFDQAFTKVVTTP
                     ADALQPLIPVAQTFTQQLVMVGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLP
                     AQHQAFNQAWTTAVTATQ"
     gene            complement(2519..3493)
                     /gene="ghrB"
                     /locus_tag="JNZ57_003015"
     CDS             complement(2519..3493)
                     /gene="ghrB"
                     /locus_tag="JNZ57_003015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312465.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase GhrB"
                     /protein_id="HAY8829149.1"
                     /translation="MKPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTVEQNAAIFA
                     EAEGLLGSNENVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTET
                     VADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMAL
                     AQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLF
                     GAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLS
                     MANVVAVPHIGSATHETRYGMAACAVDNLIDALQGKVEKNCVNPHVAD"
     gene            complement(3597..4256)
                     /locus_tag="JNZ57_003016"
     CDS             complement(3597..4256)
                     /locus_tag="JNZ57_003016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family lipoprotein"
                     /protein_id="HAY8829150.1"
                     /translation="MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLDSL
                     VGAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRS
                     GDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDL
                     NMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSP
                     L"
     gene            4409..6742
                     /locus_tag="JNZ57_003017"
     CDS             4409..6742
                     /locus_tag="JNZ57_003017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418007.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin guanine dinucleotide-containing
                     S/N-oxide reductase"
                     /protein_id="HAY8829151.1"
                     /translation="MANSSSRYSVLTAAHWGPMLVETDDETVFSSRGALATGMENSLQ
                     SAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQDEFVRVSWDEALDLIHQQHKRIR
                     EAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVV
                     GGSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKL
                     ICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLVENGWHDEAFLARCTTGYA
                     VFASYLLGESDGIAKTAEWAAGICGVHAAKIRELAALFHQNTTMLMAGWGMQRQQFGE
                     QKHWMIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRSAVLSSMQGSLPGGSDAVDK
                     IPVARIVEALENPGCAYQHNGMNRLFPDIRFIWWAGGANFTHHQDTNRLIRAWQKPEL
                     VVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVVPPRYEARNDF
                     DVFAELSERWEKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEFWQANQL
                     IEMPENPDSERFIRFADFCRDPQAHPLKTDSGKIEIFSQRIADYAYPDCPGHPMWLEP
                     DEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELYAVANREPATIHPDDALARGIQD
                     GDTVRLWNARGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTKDL
                     PSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS"
     gene            complement(6711..7151)
                     /locus_tag="JNZ57_003018"
     CDS             complement(6711..7151)
                     /locus_tag="JNZ57_003018"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HAY8829152.1"
                     /translation="MIREAQRSELPAILELWLESTTWGHPFIKANYWRDCIPLVRDAY
                     LANAQNWVWEEDSKLLGFVSIMEGRFLAAMFVAPKAVRRGIGKALMQYVQQRHPHLML
                     EVYQKNQPAINFYQAQGFHIVDCAWQDETQLPTWIMSWPVVQTL"
     gene            complement(7148..7711)
                     /gene="tag"
                     /locus_tag="JNZ57_003019"
     CDS             complement(7148..7711)
                     /gene="tag"
                     /locus_tag="JNZ57_003019"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HAY8829153.1"
                     /translation="MERCGWVSQDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGL
                     SWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAY
                     LQMEQNGEPFADFVWSFVNHQPQVTQATTLSEIPTSTPASDALSKALKKRGFKFVGTT
                     ICYSFMQACGLVNDHVVGCCCYPGNKP"
     gene            7869..8567
                     /locus_tag="JNZ57_003020"
     CDS             7869..8567
                     /locus_tag="JNZ57_003020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709326.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HAY8829154.1"
                     /translation="MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGHS
                     TERYTWDSDHQPDYNDILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYEQ
                     VTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSSLGWRVDSRLGDLRPWAQI
                     SYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALTQAENTTN
                     NSDYLYTMGVSARF"
     gene            8795..9997
                     /locus_tag="JNZ57_003021"
     CDS             8795..9997
                     /locus_tag="JNZ57_003021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8829155.1"
                     /translation="MTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAP
                     VSQVAFSFGLLSLGLAISSSVAGKLQERFGVKRVTMASGILLGLGFFLTAHSDNLMML
                     WLSAGVLVGLADGAGYLLTLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTQLLE
                     TVGLEKTFVIWGAIALVMIVFGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWM
                     LAVMFLTACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDK
                     IARIRVITIGQVISLVGMAALLFAPLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFG
                     LNNLAKNYGVIYLGFGIGSIFGSIIASLFGGFYVTFYVIFALLILSLALSTTIRQPEQ
                     KMLREAHI"
BASE COUNT         2429 a         2434 c         2587 g         2670 t
ORIGIN      
        1 ttttttagga ttatatcaag gagaagaaac aaacttatta agctagaata gctacgggtg
       61 cttgagactg tttgtctcag gtattcaccg aaaggcagac agagaaaagc cccacctgac
      121 tataaatcaa agtgaggcac cctatgcctg aacaccataa ggttagcctc ttactcgttg
      181 gaaatcaaca cagggggctg ggaatgccgc aaaaatacgg attactttca ttaatagtga
      241 tttgtttcac gcttttattt ttcacctgga tggtaagaga ttcactgtgt gaattgcata
      301 ttaaacaggg gcgttatgag ctggcggcat ttttagcctg caatttaaaa gagtaagagt
      361 cttcggcggg aaattattcc cgcctttctt acggcgttgc gcattctcat tgcacccaca
      421 tttattcttc acaaaaataa taatagattt tactacgcga tcgattattt atttcctgaa
      481 aaaaaataaa aaaatccccg ccaaatggca gggatcttag attctgtgct ttcaagcaga
      541 gattacaggc tggttacgtt accagctgcc gggcctttag cgccgctttc gatggtgaag
      601 gacactttct gaccttcgtc cagagatttg taaccatcgt tctggatagc agagaagtgt
      661 acgaacacat ctttagagcc atcgtcagga gtgatgaagc cgaagccttt gtcagcgttg
      721 aaccatttta cgataccagt cattttaccg gacatagtgt attaccttta ataattaagt
      781 gtgcctttcg gcgatatggc gtgctttaca gattttgaag cgttaaagga atgtgcacta
      841 cgaggggtat caacgataac tcttgaaggg acttgcctta ctacactgct ttaatggtct
      901 gtacgtcaaa ccgttgatgt gcattaagcc acgcattggc gggtgatgca acaattattt
      961 ttcatattta tgattaatcg gttggaaaac ggtcctgtca tcaggaccgt aaacagcaat
     1021 aaagtggata aaagtctatt ccatcaactg cttacttaat gccgggttgg cttgaatcaa
     1081 acgcatcaat tttagttcgg cacttgaagg cttcacgcgt ctggattccc attcctttac
     1141 catggcgact gatatgccca aaacccgggc gaaatcatcg atttttaacc ctgtcccttt
     1201 tcgtaactgc tcaatttcgg tacaggacgt tgttctgtgc gtcagggtaa ttttctgcgt
     1261 ttcatcttta aaaacaatct gttccaggct gctcaacagc tcatgcattg gatctttata
     1321 ttccattgaa aactcctcaa atcacactgc gggatcgtga attgcatcga agctcattaa
     1381 gaatagtcgg gaaaagcaga cacagcgggg tgaagtcagg gcatgctctg gctatgattc
     1441 gattcagcca gtcatttagc gtgacttata gccacctaac gatctgataa atgccgatat
     1501 atctcttacc attcctgttt tgtaaagatt tcgaaaatct aaagttctgc gaaggcgtaa
     1561 atctcgggct acaaaaaagc aacggcaata tcatttttta acaatgaaac aacaaattaa
     1621 ccttgtttca ttttctccat gattttacca ggaagattac gtagaaaggg tatcctgcaa
     1681 gcctgtcctg gactatcctt gtcacgtcag acacgcgtgt gtcgttgtgc gctttttttg
     1741 ggtgaaagga gtaagaaaat ggcgacagga aagtcctgct ctcgctggtt tgcgcctctt
     1801 gcggcgttat taatggtagt tagcctgagt gggtgttttg ataaagaagg cgatcagcgt
     1861 aaagcgttta tcgacttcct gcagaataca gtgatgcgta gcggtgaacg tctaccaacc
     1921 ctgactgccg atcagaaaaa acagtttggt ccttttgtct ctgattacgc gattctgtat
     1981 ggttattctc agcaggtgaa tcaggcgatg gattccggtc tgcgcccggt cgtagacagc
     2041 gttaacgcaa ttcgcgtacc gcaggattac gttacgcaaa gcggtccgct gcgtgaaatg
     2101 aacggttcgc tgggtgtgct ggcgcaacaa ctgcaaaatg cgaagttgca ggccgatgct
     2161 gcgcactctg cgctaaaaca gaccgatgat ttgaaaccgg tctttgatca ggcattcacc
     2221 aaagtggtaa cgacgccagc tgatgcattg caaccgttga ttccggttgc acaaactttc
     2281 acgcaacaac tggtgatggt tggagactac attgctcaac aaggtactca ggtgagcttt
     2341 gtagcaaatg gtatccagtt cccgacttcg cagcaggcaa gtgaatataa caaactgatt
     2401 gcgccgttac cggcacaaca tcaggcgttt aatcaggcct ggactacagc agttactgca
     2461 acccaataaa gagtaaaagc ccgagcgatt atcgggcttt acttcacgca gtcgcggctt
     2521 agtccgcgac gtgcggattc acacagttct tctcaacctt tccttgtaac gcatcaatca
     2581 aattatccac ggcacaggcg gccatgccat aacgcgtctc atgggtggca gatccaatat
     2641 gcggtactgc gacgacgttg gccattgaga gcaacggcga atctacggac agtggctctt
     2701 gttcgaagac atccagcccg gcggcgtgaa tttcgccttt ctgcaatgct gcgatcagtg
     2761 cattttcgtc aaccaccggg ccacgtccgg cattaatgaa aatggcggag gatttcattt
     2821 tggcgaattg ttctgcgcca aacagatgat gcgtctcatc agttaacggc aggatcaggc
     2881 aaacgaaatc tgactcttgt aacagagtat ccaaatcgca gtagcgggcg ttgaagcgtt
     2941 cttctgcttc tttatggtgg cggcgcgcgt tatagaggat gggcatgttg aagccaaagt
     3001 gcgcacgttg tgccagcgcc atgccgatcc gtcccatccc gacaatgccc agtgttttat
     3061 ggtgaacgtc agtgccgtac cagtccgggc ctatgctcgc ggtccattcg cctgctttta
     3121 cccgttctgc tacctccaca acccgacgag cggtagacaa caccagcgcc atcagcgtat
     3181 cggcgacggt ttctgttaat acggttggcg tgtgcatcag cagaattttt cgggcggtaa
     3241 gcgcatcgac atcaaaattg tcatagccga cggagatcgt tgatgtggca cgcagtttcg
     3301 gcattttttc cagcaatgcg gcatctacat tctcgtttga acccagtaaa ccttcagctt
     3361 cggcaaaaat tgctgcattt tgttcgacgg tttgtgggct gaggtttgcc acctggtgaa
     3421 cggtgaaatg ctcttgcagg cgttgcagta aatcatcagg taaggctttg tagaggataa
     3481 cggacggctt catgcttctc tccattcact gataaggcgc tcaccttagc ctgaaatatg
     3541 atgaaggaaa actgaagaat gctaggtgat ttctgcatca cctggcatga aagggattac
     3601 agcgggctta aggtaatttc tacacggcgg ttttgcgcct taccttctgc ggtgctgttg
     3661 ctggcgattg ggttagccgg gccaaggccc tgagtacgga tgcggctggc gtccacgccc
     3721 tgggtgatca acgcgctggc aacagaatcc gcacgctgct gggagagacg catgttcagg
     3781 tcgtgacccc ccgtgctgtc ggtataacca atcacgttaa ccgccgtttt cggatactct
     3841 ttcagcacca ttgccacgcc ggtcagggtg ttagcgcctg ccggtttcag ggtcgcgctg
     3901 ctgctgtcga aggtcacatt gttcggcata ttgaggataa tgttatcccc gctgcgggtt
     3961 acgctaacac ctgtgccgcg cattttgtca cgcagcttcg cttcctgcac atccatgtaa
     4021 taacccacgc cgccgcccag agctgcgcct gctgctgcgc caatcagcgc gcctttaccg
     4081 cgatctttct tcgaagaaga gagcgcacca atacccgcgc ccacgagaga gtccagacct
     4141 gcgccgatag cagatttgcc tgcttcgcgt tcgccggtgt aagggttagt tgtgcagcca
     4201 gataccgcca gagcgccact cactacggcg gcaataagat aaacacgttt cttcattgtt
     4261 aatccttaat aaccttttta ttctttgcca cgggttccgt ggcgggagat tatgccgcgt
     4321 gaacatgaag attattcctg ggaatactcg gaaatttgta agtaatattt aactgctcaa
     4381 tacatctaac ctttcaggag tcttcggttt ggccaactca tcctcacgat attccgttct
     4441 gactgccgcc cactgggggc ccatgctggt tgaaaccgac gacgaaaccg tgtttagctc
     4501 gcgtggcgcg ttagccacag gaatggaaaa ctccttgcag agcgcggttc gcgaccaggt
     4561 tcacagcaat acgcgggtac gatttccaat ggtgcgcaaa ggctttctcg cgtcaccgga
     4621 aaacccgcaa ggcattcgtg ggcaggatga atttgttcgc gtgagttggg atgaggcgct
     4681 ggatcttatt caccaacaac ataaacgcat tcgtgaggct tatggtccgg catcgatttt
     4741 tgctggttcc tacggctggc gttcaaacgg cgtgctgcat aaggcctcga cattattaca
     4801 acgctatatg gcgctggcag gcggttatac cgggcatctg ggggattatt cgaccggtgc
     4861 ggcacaggcg atcatgccgt atgtcgtggg tggcagcgaa gtttatcaac agcaaaccag
     4921 ttggccgctg gtgctggaac atagcgatgt cgtggtgttg tggagtgcta acccactcaa
     4981 tacgctgaaa attgcgtgga atgcatctga tgagcagggg ctttcttact tttccgcact
     5041 gcgtgacagc gggaaaaagc tgatctgtat tgatccaatg cgatcggaaa ccgtcgattt
     5101 ctttggcgat aaaatggagt gggtggcacc gcacatgggc accgatgttg cgctgatgct
     5161 ggggatcgcc catacgctgg tggaaaatgg ttggcacgac gaagcgtttc tggcgcgttg
     5221 caccacaggt tatgccgtct tcgcctctta tttgctgggc gagagtgacg gaatagccaa
     5281 aaccgccgaa tgggcggcag ggatttgtgg ggttcacgca gcgaaaattc gcgagttggc
     5341 ggctcttttc caccaaaaca cgaccatgct gatggctggc tggggaatgc agcgccaaca
     5401 gtttggtgag caaaaacact ggatgatcgt cacgctggcg gcaatgttgg ggcaaatcgg
     5461 cacacccggc ggcggttttg gtctttctta tcattttgcc aatggtggta atcccacgcg
     5521 gcgttctgcg gtgctctctt ccatgcaggg tagcttgccg ggtggcagcg atgcggtaga
     5581 taaaatccct gttgcccgta ttgttgaagc actggaaaac cctggctgcg cataccaaca
     5641 caatggcatg aatcgcctct tcccggatat tcgctttatc tggtgggcgg gtggcgccaa
     5701 cttcacccat catcaggaca ctaatcgcct gatacgagct tggcaaaaac cggagctggt
     5761 agttatctcc gaatgcttct ggacggcggc ggcaaaacac gcggatatcg ttctgcctgc
     5821 gactacctct tttgagcgta atgatctcac catgaccggc gattacagta atcagcatct
     5881 ggtgccgatg aagcaagtgg tgccgccacg ctatgaagcg cgtaatgatt ttgatgtttt
     5941 tgccgagtta agtgaacgct gggagaaggg cggttatgca cgttttacgg aaggaaaaag
     6001 tgagttgcaa tggctggaaa cgttttataa cgttgcccga cagcgcgggg caagccagca
     6061 ggttgaattg ccgccatttg ctgagttctg gcaagccaat cagttaattg agatgccgga
     6121 aaacccggac agcgagcggt ttattcgctt cgctgatttt tgccgcgatc cgcaggcgca
     6181 tccattaaaa accgacagcg gtaagattga aatcttctcg cagcgtattg ccgattacgc
     6241 ttatccggat tgcccggggc atccaatgtg gctggagccg gacgaatggc agggcaatgc
     6301 cgaaccggaa cagttacagg tactttctgc tcatccggcg catcgtctgc acagccagct
     6361 gaattacagt tctctgcgcg aattgtatgc ggtggcaaat cgtgagcctg ccaccattca
     6421 tcctgacgat gccctggcgc gcggcattca agatggcgat actgttcggc tgtggaacgc
     6481 acgcgggcaa attcttgccg gagcggtcat tagcgaggga attaaacctg gcgtgatttg
     6541 tattcacgaa ggggcatggc cggatttgga tttaaccgct gacggtattt gtaaaaacgg
     6601 cgcagtcaac gtgctgacca aagatctccc cagctcgcgg ctggggaatg gctgtgcggg
     6661 taatacggcg ctggcatggc tggaaaaata caacggtccg gaactgacac ttacagcgtt
     6721 tgaaccaccg gccagctcat aatccaggtg ggtagttggg tttcatcctg ccatgcgcaa
     6781 tcgacaatgt gaaaaccctg cgcctggtaa aaatttatcg ccggttgatt tttttgataa
     6841 acctccagca tcaggtgggg atggcgctgc tgcacatatt gcatcagcgc cttaccaata
     6901 ccgcgcctga cggccttcgg tgcgacaaac atcgctgcca gaaatcggcc ttccataatg
     6961 ctgacaaaac cgagaagctt actgtcttct tcccagaccc agttttgcgc attggcaaga
     7021 tacgcatccc gcaccagcgg aatgcaatca cgccagtaat tcgcttttat aaagggatgt
     7081 ccccaggttg tactttccag ccacagttcg aggatcgcgg ggagttctga acgttgcgct
     7141 tcccgaatca tggtttattt cccggatagc aacagcagcc aaccacatga tcattcacca
     7201 gcccacatgc ctgcataaag gagtaacaga ttgtggtacc gacaaactta aaaccacgtt
     7261 ttttcagtgc tttagatagg gcgtcggagg cgggcgtaga tgtggggatt tcgctcaacg
     7321 ttgtggcttg tgtcacctgt ggctgatgat ttacaaacga ccagacaaag tcggcaaacg
     7381 gttcgccgtt ctgttccatt tgcaggtacg cccgcgcatt accaataatt gcctgaattt
     7441 tcccgcgatg gcggataatc ccggcgtcct gtaccagtct ttctacatcc tcttcctgca
     7501 ttgctgcgac cttcaccgga tcgaactgat gaaagcaggc gcgatagttt tcgcgttttt
     7561 tgaggacggt gatccacgat aacccagcct gctgcccttc aaggcagatc atttcgaaca
     7621 gttttttact gtcagtttca ggcacgcccc actcattatc atggtaggca atataaagcg
     7681 ggtcctgact cacccagccg caacgttcca tactttccct cgctatgtac ccgatcgtaa
     7741 aaatttcagc cgcttttctt gacgcatcgg tgaaaaagtc aatatttaat acagggctac
     7801 tatgcccgat atccttcata caatgacaat aatattgccg aattcggctc ttccctggag
     7861 tcgtgttaat gatcataaaa aaaagcggtg gtcgctggca gctaagcctg ctggcgagcg
     7921 tggtaatcag tgcctttttt ctcaacacag cttacgcctg gcaacaagaa tatatcgttg
     7981 atacgcaacc cggacattcc acagagcgtt acacctggga tagtgatcat caacctgatt
     8041 acaacgatat tttgtcgcaa cgtattcaaa gtagccaaag ggcgctggga ctggaagtca
     8101 atctggcgga agaaactcct gtggatgtga ccagcagtat gagtatgggc tggaattttc
     8161 ctttatatga acaggttaca accggcccgg tcgcggcatt acattacgat ggcacaacca
     8221 cctcgatgta taacgagttt ggcgacagta ctaccacgct gaccgatccg ttatggcatg
     8281 ccagcgtgag tagcttaggc tggcgtgttg actcccggct tggcgatctc cgaccctggg
     8341 cgcaaatcag ctataaccag caatttggcg agaatatctg gaaggcgcaa tcaggcctga
     8401 gccggatgac ggcgacaaac cagaacggca actggctgga tgtcaccgta ggcgctgata
     8461 tgttgctcaa tcaaaatatt gccgcctatg ccgcgctaac tcaggcagaa aataccacta
     8521 ataatagcga ctatctgtat acgatggggg ttagcgccag attttaacgt aacagtcaca
     8581 attgaaacca ttgaataaca atagttgcgg tgatagtgtg tgctaactta caaataataa
     8641 atttggtgaa taattgtcgc gtcattcatt cctgaactaa ggcatttcat tccgttctga
     8701 tggcatttca tgccgttttt ccccaggcat aaaatgcact tcgttatggt tgtcggcaga
     8761 gatttttcct ttttattact gcaggaatac tgccatgaca ccttcaaatt atcagcgtac
     8821 ccgctggctg acactcatcg gtactatcat tacccagttt gcgctggggt cggtttatac
     8881 ctggagtctg tttaatggcg cgctttctgc caagctggat gcgccggtaa gccaggtcgc
     8941 tttctctttc ggcttgttaa gtctggggct ggcaatttca tcttctgttg cggggaaatt
     9001 acaggaacgt tttggcgtta aacgcgtcac tatggcttcc ggcattttgc taggattagg
     9061 cttcttcctg acagcgcatt ctgacaacct gatgatgctg tggttaagcg ccggtgtgct
     9121 ggtcggtctg gcggatggcg cgggttacct gctgacgctc tctaactgcg tgaagtggtt
     9181 cccggagcgt aaaggtctga tctccgcgtt cgctatcggt tcttatggtc ttggtagcct
     9241 gggtttcaaa tttatcgaca cgcagctgct ggaaacggtg ggtctggaaa aaacatttgt
     9301 gatttgggga gcgattgcgc tggtgatgat tgttttcggc gcaacgttaa tgaaagacgc
     9361 accaaaacag gaagtgaaaa ccagcaatgg tgtggtggag aaagattaca cgctggcaga
     9421 gtcgatgcgt aaaccgcagt actggatgtt agcggtaatg ttcctgactg cctgcatgag
     9481 cggcctgtac gtgattgggg tagcgaaaga tatcgcccaa agtctggcac accttgatgt
     9541 ggtttccgca gccaatgcag taacggttat ttccatcgct aacctttcag gtcgtctggt
     9601 gctgggcatt ctgtctgaca aaattgcccg tatccgtgtt atcaccattg gtcaggtgat
     9661 ttcgctggtg ggtatggcgg ccctgctgtt tgcaccatta aatgcagtga cgttctttgc
     9721 agcgattgcc tgcgtggcat ttaactttgg cggcactatt accgtctttc catcactggt
     9781 cagtgagttc ttcggcctca ataacctggc gaaaaactac ggtgtgattt acctcggttt
     9841 cggtatcggt agcatttttg gttcgattat cgcctcactg tttggcggtt tctatgtgac
     9901 cttctacgtg attttcgccc tgctgattct gtcattggcg ctttctacga cgattcgtca
     9961 gccagagcag aaaatgttgc gtgaggcgca tatttagaaa tatgttgcta ctgaaataaa
    10021 tacgaggagg gagacttcaa agtctccctt ttttatggac gcatattaaa agaacaataa
    10081 tattcatacc acaaatatat tttatttatt tatatattat
//
LOCUS       DADMHC010000147        10003 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.149, whole genome shotgun sequence.
ACCESSION   DADMHC010000147 DADMHC010000000
VERSION     DADMHC010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10003)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10003)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10003
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.149"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(271..1635)
                     /gene="tdcG"
                     /locus_tag="JNZ57_003022"
     CDS             complement(271..1635)
                     /gene="tdcG"
                     /locus_tag="JNZ57_003022"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HAY8829156.1"
                     /translation="MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSH
                     IVVDLYGSLSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGA
                     HIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEALLSKTYYSVGGGFIVEEEHFGLS
                     HDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHD
                     GIERGMNTEGVLPGPLNVPRRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENA
                     AGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISG
                     AEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPC
                     IERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIK
                     VVCG"
     gene            complement(1707..2096)
                     /locus_tag="JNZ57_003023"
     CDS             complement(1707..2096)
                     /locus_tag="JNZ57_003023"
                     /EC_number="3.5.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312020.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enamine/imine deaminase"
                     /protein_id="HAY8829157.1"
                     /translation="MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPA
                     DVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATY
                     PTRSCVQVARLPKDVKLEIEAIAVRSA"
     gene            complement(2110..4404)
                     /gene="tdcE"
                     /locus_tag="JNZ57_003024"
     CDS             complement(2110..4404)
                     /gene="tdcE"
                     /locus_tag="JNZ57_003024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-ketobutyrate formate-lyase/pyruvate
                     formate-lyase"
                     /protein_id="HAY8829158.1"
                     /translation="MKVDIDTSDKLYADAWLGFKGTDWKNEINVRDFIQHNYTPYEGD
                     ESFLAEATPATTELWEKVMEGIRIENATHAPVDFDTNIATTITAHDAGYINQPLEKIV
                     GLQTDAPLKRALHPFGGINMIKSSFHAYGREMDSEFEYLFTDLRKTHNQGVFDVYSPD
                     MLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGISYLVRERELQFADLQSRLEKGEDL
                     EATIRLREELAEHRHALLQIQEMAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNG
                     GAMSLGRTASFLDIYIERDFKAGVLNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSG
                     DPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEELPIAFKKYA
                     AQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYA
                     INGGVDEKLKIQVGPKTAPLMDDVLDYDKVMDSLDHFMDWLAVQYISALNIIHYMHDK
                     YSYEASLMALHDRDVYRTMACGIAGLSVATDSLSAIKYARVKPIRDENGLAVDFEIDG
                     EYPQYGNNDERVDSIACDLVERFMKKIKALPTYRNAVPTQSILTITSNVVYGQKTGNT
                     PDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKE
                     DPVRKTNLVGLLDGYFHHEADVEGGQHLNVNIMNREMLLDAIEHPEKYPNLTIRVSGY
                     AVRFNALTREQQQDVISRTFTQAL"
     gene            complement(4438..5646)
                     /gene="tdcD"
                     /locus_tag="JNZ57_003025"
     CDS             complement(4438..5646)
                     /gene="tdcD"
                     /locus_tag="JNZ57_003025"
                     /EC_number="2.7.2.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417585.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionate kinase"
                     /protein_id="HAY8829159.1"
                     /translation="MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAF
                     LSVNGGEPAPLAHHSYEGALKAIAFELEKRNLNDRVALIGHRIAHGGSIFTESAIITD
                     EVIDNIRRVSPLSPLHNYANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLP
                     WKYYEELGVRRYGFHGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQS
                     VDTSMGMTPLEGLMMGTRSGDVDFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLS
                     SDLRVLEKAWHEGHERAQLAIKTFVHRIARHIAGHAASLRRLDGIIFTGGIGENSSLI
                     RRLVMEHLAVLGVEIDTDMNNRSNSCGERIVSSENARVICAVIPTNEEKMIALDAIHL
                     GKVNAPAEFA"
     gene            complement(5672..7003)
                     /gene="tdcC"
                     /locus_tag="JNZ57_003026"
     CDS             complement(5672..7003)
                     /gene="tdcC"
                     /locus_tag="JNZ57_003026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine transporter TdcC"
                     /protein_id="HAY8829160.1"
                     /translation="MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRA
                     GFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITF
                     LYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLM
                     VKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIM
                     VFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLF
                     TLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGH
                     YLGTLEGLNGLILKFGYKGDKTKVSLGKLNTISMIFIMGSTWVVAYANPNILDLIEAM
                     GAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF"
     gene            complement(7025..8014)
                     /gene="tdcB"
                     /locus_tag="JNZ57_003027"
     CDS             complement(7025..8014)
                     /gene="tdcB"
                     /locus_tag="JNZ57_003027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional threonine ammonia-lyase/L-serine
                     ammonia-lyase TdcB"
                     /protein_id="HAY8829161.1"
                     /translation="MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEI
                     FLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGK
                     VVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIA
                     GQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAA
                     SFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQR
                     NKVVTEGAGALACAALLSGKLDQYIQNRKTVSIISGGNIDLSRVSQITGFVDA"
     gene            complement(8113..9051)
                     /gene="tdcA"
                     /locus_tag="JNZ57_003028"
     CDS             complement(8113..9051)
                     /gene="tdcA"
                     /locus_tag="JNZ57_003028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator TdcA"
                     /protein_id="HAY8829162.1"
                     /translation="MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIIND
                     IEDYFGVELVVRKNTGVTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFG
                     FPSLIGFTFMSGMINKFKEVFPKAQVSMYEAQLPSFLPAIRDGRLDFAIGTLSAEMKL
                     QDLHVEPLFESEFVLVASKSRTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNG
                     ISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAV
                     WSKNYRIKKAASVLVELAKEYSSYNGCRRRLLIEVG"
     gene            9240..9584
                     /gene="tdcR"
                     /locus_tag="JNZ57_003029"
     CDS             9240..9584
                     /gene="tdcR"
                     /locus_tag="JNZ57_003029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator TdcR"
                     /protein_id="HAY8829163.1"
                     /translation="MTGITIFYGDNIIRYVVNTKKGLRPYFKQLPDNYQAKFELNLMS
                     KFSNFIINKPFSAINTAARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSS
                     DRTSFCECNRFP"
BASE COUNT         2690 a         2516 c         2281 g         2516 t
ORIGIN      
        1 tctcgctcaa tattttgtag ggcttattat ttttttccga gccgcatcaa ggcgatatgc
       61 ggtctacgtt tttgcaggcg agttattaga ataaagaaat gatacgcgcg aggtcagaga
      121 aaatcttcac aatcaagact ttgaaataac ggagatggat aagaattttc tactaaatta
      181 atcgcaagag aatattcatt ctctatttgc ggcagatcac aaaaaaaagg tgcacatttg
      241 tgcacccaag gatgaaagct gacagcaatg tcagccgcag accactttaa tggccagtcc
      301 tccgcgtgat gtttcgcggt atttatcgtt catatctttg ccggtttcat acatcgtctc
      361 gatcacttta tcgagtgaaa cacgcggtgc cgaggtgcgg cgcatcgcca tccgcgcggc
      421 gtttactgct ttcacggcat taatggcatt acgttcaatg cacgggattt gtacctgtcc
      481 ggcaaccgga tcgcaggtca gcccaaggtt atgctccatc gcgatttccg ccgcattgca
      541 tacctgcgcc ggactgccgc ccagtagttc agttaaccct gccgccgcca ttgaacaggc
      601 cacgccaatc tccccctgac agccgacctc cgcgccagag atggaggcgt tcattttata
      661 cagcgcgcca atagcccccg ctgccagaaa atagcgggca attgaccgct cgtttaccgg
      721 acgacggaac ttatcgtaat aagccagcac tgccggaata atgccgcacg caccgttagt
      781 cggtgccgtt accacgcgcc cgccagctgc gttttcttca ctaaccgcca gcgcgtacat
      841 gttgatccag tcgatgacat tcatcggatc gttagagatg ttatcgctag aaaccagctg
      901 acgacgcagc gctacggcac gacgcggcac attgagcgga ccaggcagca cgccttcagt
      961 gttcatcccg cgttcaatac cgtcatgcat cacttgccag atacgggcaa accctgcgtc
     1021 aatttccgct ttgctgcgca gcgccagctc gttgtgcatc atcaggccag atatagacag
     1081 gccgttgtaa tcacacattt tcagcagttc acctgctgag tggaaatcgt aaggtacgga
     1141 cgtttcgaca tcgtgcgaca ggccgaagtg ttcttcttcg acaataaacc cgccgccgac
     1201 agagtaatag gttttactta atagcgcttc ctgtcccttc caggcagtga tccgcattcc
     1261 gttctcatgg cgaggcaaca tttcgggatg gaagataatg ttctttgcta caggaaaatc
     1321 aacaatatgc gcaccagatg ccactggcag ccgcccgctg cgcgttacta actctataaa
     1381 tgcagggatc tcatcaatga caacatcctg cggactgttt cctgccagtc ccatgataat
     1441 ggcgacatcc gtggcatggc ctttgcccgt cagtgacaac gacccataca gatcgaccac
     1501 aatatggctc gtcgcggtta ataagccgct actttccagc cgatcaataa aactttttcc
     1561 ggcattcatt ggccccacgg tatgcgaact ggagggacca atcccaattt tgaaaatatc
     1621 gaatgcacta atcatatcca caccctcgga ttgccgttca gtgaagtgga gcggaacgac
     1681 cttgcgaccg tcccgctcac gaggctttac gcactacgta ctgcgatagc ttcaatttcc
     1741 agcttcacat ctttcggcaa acgcgcaacc tgcacacagc tccgggtcgg gtaggtcgcc
     1801 tgatgctcat cgaagaactg cttatagact tcattgatgg tggcaaaatc attcagatcg
     1861 gtgatgaaca cggtcatctt gatgatatcg cccacgctca gcccggcagc aaccacgatc
     1921 gctttgacgt tttcgaggct taaacgcgcc tgatcttgca catcagccgg gatctcaccg
     1981 gtctgcgggc aaaccggaat ttgcccggag gtgaagacca tgctgcctaa atcaacgccc
     2041 tgaacataag ggccgattgc gcctggggca cgttgcgttt cgataatctt tttcatacat
     2101 cctccggcgt cagagcgcct gggtaaaagt acgtgaaata acatcctgtt gctgttcacg
     2161 ggtcagtgcg ttgaagcgca cggcgtagcc agagacacgg attgtcaggt taggatattt
     2221 ttccgggtgc tcgatggcat ccagcagcat ttcccgattc attatgttga cgttgaggtg
     2281 ttgaccgcct tcgacatccg cttcgtggtg gaaataccca tccagcaggc cgacaaggtt
     2341 ggttttacgt actggatctt ctttgcccag cgccgcagga acgattgaga aggtgtacga
     2401 gatcccatct ttggcgtagg tgaacggcag tttcgccacc gacgtcaatg aggccacggc
     2461 acctttgcgg tcacgaccat gcatcgggtt agcgcccggc gcgaacggtg ttccggcgcg
     2521 acgaccgtcc ggcgtattac cggttttctg gccgtacacc acgttagaag tgatagtcag
     2581 aatcgactgg gtagggacgg cgttgcgata ggttggcagc gctttaattt tcttcataaa
     2641 gcgttcaacc aggtcgcagg caatgctgtc tacgcgctcg tcgttgttgc cgtactgcgg
     2701 atattcaccg tcgatttcaa agtccaccgc caggccgttt tcgtcacgga ttggtttcac
     2761 gcgggcatat ttgatggcag acagggagtc cgtcgccacc gacaggcccg cgatgccgca
     2821 tgccatagtg cgatagacat cacgatcgtg cagcgccatc agcgaagctt cgtagctgta
     2881 cttgtcgtgc atgtagtgaa tgatattcag cgcgctgatg tactgcaccg ccagccagtc
     2941 catgaagtga tcgaggctgt ccatcacttt gtcgtaatcc agcacgtcgt ccatcagcgg
     3001 tgctgttttc ggcccgacct gaatcttcag cttctcgtcc accccgccgt taattgcgta
     3061 gagcagcgtt ttcgccaggt tagcgcgtgc accaaagaac tgcatttgct taccaatcac
     3121 cattgggctg acgcagcagg caatcgcgta atcgtcgctg ttgaagtcag tacgcatcag
     3181 atcgtcattt tcatactgca aggaagaggt gacgatcgac acctgcgcgg catatttttt
     3241 gaaggcaatc ggtaattctt ccgaccaaag aatggtcagg ttaggttccg gtgccggccc
     3301 catagtgtgc agggtgtgca aatagcggaa ggagtttttg gtcaccagcg tacgaccgtc
     3361 cagccccatc ccgccgatca cttccgtcgc ccagattggg tcgccggaga acagcgaatc
     3421 aaattccggt gtacgcagga agcgtaccat acggatcttc atgatgaagt gatcgatcag
     3481 ttcctgtgcc tgctgctcat tgagtacgcc agctttaaag tcgcgctcaa tgtagatatc
     3541 gaggaacgat gccgtgcggc ccagcgacat cgcgccgcca ttttgcgatt tcactgccgc
     3601 cagataagcg aagtagagcc actgcaccgc ttcttgcgca ttctgcgccg ggcgagagat
     3661 atcaaagcca tatttcgccg ccatttcctg aatctgcaac agcgcatgac gatgctctgc
     3721 cagctcctca cgcagacgga tggtggcttc cagatcctcg cctttttcca gacgagactg
     3781 gagatcggca aattgcagtt cgcgttcacg taccagataa ctgatgccat acagcgctac
     3841 gcggcgatag tcaccgataa tgcgcccacg gccatagcca tctggtaaac cggtcagcac
     3901 gccagattta cggcagcgca gcatatccgg tgagtaaaca tcaaatacgc cctggttatg
     3961 ggttttacgc agatcggtaa acagatattc aaattcactg tccatttcac ggccataggc
     4021 gtggaatgaa cttttaatca tattaatgcc accgaacggg tgtagcgcac gtttcaacgg
     4081 cgcatccgtt tgcaggccaa caattttttc cagcggctgg ttaatatatc ccgcatcatg
     4141 agcggtaatt gtggtggcaa tattggtatc gaaatcaacc ggcgcgtggg ttgcgttttc
     4201 gatacggata ccttccatta ctttttccca caattccgtg gtggcaggcg tcgcttcagc
     4261 gaggaaagat tcatcgcctt catacggtgt atagttatgt tgaataaaat cgcggacatt
     4321 aatttcgttt ttccagtccg tacctttaaa gccaagccat gcgtcggcgt acagcttatc
     4381 gctggtatca atatctacct tcatgaaaaa taatctctct acaatacttc aactaaatta
     4441 tgcaaattct gcgggcgcgt taactttgcc taaatgaatg gcatccaaag caatcatttt
     4501 ttcttcgtta gtcggaataa cagcgcaaat gacacgcgca ttttcactgg aaacaattcg
     4561 ctcaccacag gagttagagc gattattcat gtctgtatca atctctacgc ctaatacagc
     4621 caaatgttcc atgaccagac gacgaattaa gcttgaattc tctcctattc cgccggtgaa
     4681 tataattcca tccaggcgac gtaatgaagc tgcgtgtccg gcaatatgac gggcaattcg
     4741 gtgaacaaag gttttaattg ccagttgcgc gcgttcgtga ccttcatgcc aggctttttc
     4801 cagaacacgt aaatccgaag aaagaccgga aatacctaat aatcccgact ctttattcac
     4861 tacgcgttcc aggtcaccca agctctggtt ggtttggctg gcgacccagg acatcgcacc
     4921 aaaatcgaca tcgccactgc gggtacccat catcaagcct tccagcggcg tcattcccat
     4981 tgaggtgtca acactctgac cgttgcgaac tgcgcagatt gacgcgccat tgccaagatg
     5041 cgccacaacc aggccggagt catcttccgc tagattcagc aaagaatgtg cgcgctggga
     5101 aacatagcgg tgcgacgtgc cgtggaaacc ataacggcgt acacctaact cttcataata
     5161 tttccacggc aggccgtata aataagcttc cggagccatc gtctggtgga aactggtatc
     5221 aaataccgcc acctgagtta cgcccggaaa taattgctgc gccgattcaa taccacttaa
     5281 attggcgtaa ttatgcaggg gtgacagtgg agaaacgcga cggatattat caatgacctc
     5341 atcggtaata atggcggact cggtaaaaat actgccgccg tgagcgatgc ggtggccaat
     5401 taaggccact ctgtcattta aattccgttt ttccagttca aatgcaattg ccttcaatgc
     5461 accttcgtag ctgtggtgag ccagcggtgc tggctctccc ccatttacgg ataagaatgc
     5521 attttccgag ttaataccgt cggcaatacc tgacattaat acttcacagt cgctggcatc
     5581 gagtacggaa aacttaatcg aagacgaacc acagttaata accaaaacaa ccggaaattc
     5641 attcatctct tttctcatcc tgagttacgg attaaaacag tttgtatacg atgttcagga
     5701 tggtcagcag accaatcacg gtaacaaaca cgttatccag acgaccacgg tatttcgcca
     5761 gagacggcgc tttacggatg gcatacatcg gcaacaggca cagcagggat gcgataatcg
     5821 gtgcgcccat ggcttcaata aggtcgagga tgttcgggtt ggcgtaggca acaacccagg
     5881 tggagcccat gatgaagatc atgctgatag tgttcagttt acccagcgac actttagttt
     5941 tgtcgccttt ataaccgaac ttcagaatca gaccattcaa gccttccagc gtccccagat
     6001 agtgaccgaa gaaagatttg aagatagcca cgagtgcgat gatggaagcc gcatattcca
     6061 gtgtaatcgc gaacgttgtt ttggtaccgg tcatggacgc aaagtggtta gccagataag
     6121 aaagcactgg aatattctgc gctttggctt ccgccatgtt ggccggagac agcgtaaaca
     6181 ggcagctaaa ggcaaagaac atcaccactg caaccatcag catgctggca cgagaaatga
     6241 tttgggaaca tttacgttcg gtgaagtcgc gaccgaagtc tttctcatac tcttcacgtt
     6301 tagaaaccac gaaggaagag acgattggcg agaagttaaa ggagaaaacc atgatggaaa
     6361 tccccagcca gacagtgatc aggataccgt catgaccggt taacgacagc gaaccgaggt
     6421 caacctggtc gataactgca gagttccagt aagggatcag cgacagagaa atcagcacca
     6481 ggctggcgat aaacggccat accaggtagc tcatcacttt aaccatcaga tccttaccaa
     6541 accagatgac gaaagccatc agcagcaaca ggaacagcgc cacaaagccg cgattcagcg
     6601 gtgcaaatcc gagctggttt tcccagaacg tcataaaggt attggtaata gtaacgccat
     6661 aaatccacag cagtgggcaa atcgcgaaga agtacaggaa cgtgataacc acgccgccag
     6721 ttttaccaaa atgctcttcc accgtttccg taatgttgcc ggaagggtta gagccagaaa
     6781 gacacagacg cgccagcgcc cggtggcaat aaaatgcgat ggggtatgcc aataccaaca
     6841 tcagaagaat cgggatcagt ccgccaaaac ctgcgcggat agggaagaac agcaccccgg
     6901 cgccgattgc cgtaccaaac aagcctaacg tccatgtggt atctgattta cgccaggacg
     6961 attgttttgt ctggctggat acaatgctat ctgaagtact catatcctat cctcaacgaa
     7021 ttaattaagc gtcaacgaaa ccggtgattt gagagacgcg agaaagatcg atattgccgc
     7081 cggaaataat actgacggtt tttctgtttt gaatatattg gtctaattta ccgcttaata
     7141 atgcagcaca tgccagagcg cctgcgcctt cggtgacgac tttattgcgc tgaattaagg
     7201 caatcatact gtttctgatt tcgtcttcgc tgaccagcac gatgtcatcg actaattcac
     7261 gaacgatttc gtaagttaaa ttacccgggc gggagacatc acaaccatcc gccagggtgc
     7321 cggtagttcg gtgcgtggtt atttctccgg agtggaaaga agccgccatg ccgtgaacgt
     7381 tttctgactg tacgccaata acacgaatgg tcgggttaat agatttaatt gccaccgcaa
     7441 taccagcaat taaaccacca ccaccaattg gcacaatcac gttatcgaca tcatagagat
     7501 cttccataat ttccagacca atcgttccct ggccagcaat cactttcgga tcatcgtaag
     7561 gtgggataaa aatacgacct tccatttcga caatttcgct cactttagcg atagtgtcgt
     7621 tgaagttatc accatgcaga acgacttctg cggagtagtc gcacgttgcc gctactttgg
     7681 attttggcgc accttttggc atcaccactt taccgtcgat acccagcatc gcgcaggaga
     7741 gcgaaacccc ttgcgcatgg ttgcccgcag aacaggccac cacgcctttg cgtttttccg
     7801 catcggtcag tgaacttaat ttattaaatg cgccacgaat tttaaatgaa cccgtacgct
     7861 gcatattttc aaacttcagg aatatttcac ctttgcaacg ttcactaaaa tagttggagc
     7921 gaggcatgcc tgttttataa attcgcccag ccagtcgttg tttcgcttca ataatatcat
     7981 caatagcaac tggcagatcg tatgtaatat gcattataaa acctcttcgt ctgaattaaa
     8041 tatgtaggta accgtaaccg acacctgcaa aacagacagg tggattattt atgtttaaat
     8101 aaaaacaaat aactaaccaa cttctattaa tagccttcgt ctacacccat tataagatga
     8161 atactctttg gctaattcca ccaaaaccga tgctgctttt ttaatacgat aatttttcga
     8221 ccataccgcg gcatattgtg ccacaggtaa tgtttcttca accggaatag taataaattg
     8281 atttgaacca aaaggtgacg tcatatcaca aggaattaca gttaagaaat cagcattgag
     8341 aacaagatta taaattgtca cgactgagtc ggttttaacg atgttttcaa tactgatgcc
     8401 atttctttgt aacgtagtaa gaagctcgct gtagtacccc atattggttt gtggcaacac
     8461 ccactgttcg ttcttcaacg actccagcgt ggtggtgccg gtgcatgttc gggacttact
     8521 ggctaccagc acaaactcgg actcgaacag cggctcaaca tgtaaatcct gaagcttcat
     8581 ttctgcactt aacgtaccaa tcgcaaaatc cagtcgaccg tcgcggattg ccggtaagaa
     8641 cgaaggcagt tgcgcttcat acatagaaac ctgcgctttc gggaacacct ctttgaactt
     8701 gttgatcatc cctgacataa aagtaaaacc aatcaatgaa ggaaaaccaa atgagacttc
     8761 caccaccgcc tcagaagaca taccgcttat ctcattaacc atatttttca tttcacgggt
     8821 aatggattcg gaacgggaga gtaacaattg accggcaggt gttaatgtta caccggtatt
     8881 tttccgcacc actaattcca caccaaaata atcttcaata tcgttaatga ttttactgac
     8941 ggccggttga gttaacccta attcttttgc agccgagccg atagagccac ttctaatgac
     9001 ttcctgaaag actaccaggt gctgcgtttt cggaagaaga atagtgctca taacgaccta
     9061 cgttaattac ctcattgacg gcatgaagtg tatcaaaatg aaatgaacag gatatgtgcg
     9121 accactcaca aattaacttt cattactttc cagggtatcg ttattacaat caaatatctt
     9181 taaatatcaa caagttaaag cataaaaatc agcataaacc ctgattttta tcaaaaaaaa
     9241 tgacggggat aaccatattt tatggcgata acatcattcg ttatgtggtt aatacaaaaa
     9301 aggggctgag accatatttc aagcaattac cggataatta ccaggcaaaa tttgagttaa
     9361 atttaatgag caagttctca aattttatta taaataaacc attttcagcg ataaatactg
     9421 cggcacgtca cattttttca cgctatttgt tggagaacaa acatttattt tatcaatatt
     9481 ttaaaatttc gaatacaggt attgatcatc tcgaacaatt gattaacgtc aactttttct
     9541 cttctgacag gacgtcattt tgtgaatgca atcgttttcc ataaattctt ctcccctcat
     9601 aggcgacgaa tagcattttg tgttgaggat cacaaaacga ataattgctg gtcgccgcga
     9661 taaggtcaga cgaagtcagc aaggggaatt ttcactgtgc tttacatcag cgtaggacac
     9721 agaatgttgc ttcgtttact gtaacgccgg gtaaatgagc gttttttgat agtgcgtaag
     9781 tgtcgtgcga ggaaaataag catctattat tgtttgtcat gacgacaagg caggcatcaa
     9841 tgaaaggctt cccaattgca catatttttc acccttcaat cccgccaatg cacgcagtgg
     9901 ttaacaatca caatagaaat attgattatt ggacggtaaa aagaaagttt gcagaaattg
     9961 tctccaccaa tgacgttaaa aaaatttaca gtataagtaa tga
//
LOCUS       DADMHC010000148         9945 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.150, whole genome shotgun sequence.
ACCESSION   DADMHC010000148 DADMHC010000000
VERSION     DADMHC010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9945)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9945)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9945
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.150"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..197
                     /locus_tag="JNZ57_003030"
     CDS             <1..197
                     /locus_tag="JNZ57_003030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707232.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-dependent dehydratase"
                     /protein_id="HAY8829164.1"
                     /translation="AWLTDEDIIDYELTSRNEPFKGTIVSRKSVAALITDIIDKPEKH
                     IGENIGINQPVTDGDKPLFM"
     gene            507..1235
                     /gene="mpaA"
                     /locus_tag="JNZ57_003031"
     CDS             507..1235
                     /gene="mpaA"
                     /locus_tag="JNZ57_003031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415842.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide amidase MpaA"
                     /protein_id="HAY8829165.1"
                     /translation="MTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAASRESGLI
                     LAGTHGDENSSVVTLSCALRTLTPSLRRHHVVLCVNPDGCQLGLRANANGVDLNRNFP
                     AANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQALCQLIHRIQPAWVVSFHDPL
                     ACIEDPRHSELGEWLAQAFELPLVTSVGYETPGSFGSWCADLNLHCITAEFPPISSDE
                     ASEKYLFAMAYLLRWHPKDAIRPS"
     gene            complement(1210..2175)
                     /gene="ycjG"
                     /locus_tag="JNZ57_003032"
     CDS             complement(1210..2175)
                     /gene="ycjG"
                     /locus_tag="JNZ57_003032"
                     /EC_number="5.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707230.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-Ala-D/L-Glu epimerase"
                     /protein_id="HAY8829166.1"
                     /translation="MRTVKVFEEAWPLHTPFVIARGSRSEARVVVVELEEEGIKGTGE
                     CTPYPRYGESDASVMAQIMSVVSQLEKGLTREELQKILPAGAARNALDCALWDLAARK
                     QQQSLADLIGITLPETVITAQTVVIGTPDQMANSASTLWQAGAKLLKVKLDNHLISER
                     MVAIRTAVPDATLIVDANESWRAEGLAARCQLLADLGVAMLEQPLPAQDDAALENFIH
                     PLPICADESCHTRSNLKALKGRYEMVNIKLDKTGGLTEALALATEARAQGFSLMLGCM
                     LCTSRAISAALPLVPQVSFADLDGPTWLAVDVEPALQFTTGELHL"
     gene            2294..2800
                     /gene="tpx"
                     /locus_tag="JNZ57_003033"
     CDS             2294..2800
                     /gene="tpx"
                     /locus_tag="JNZ57_003033"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HAY8829167.1"
                     /translation="MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFA
                     GKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNN
                     VITLSTFRNAEFLQAFGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYE
                     AALAVLKA"
     gene            complement(2844..4385)
                     /gene="tyrR"
                     /locus_tag="JNZ57_003034"
     CDS             complement(2844..4385)
                     /gene="tyrR"
                     /locus_tag="JNZ57_003034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator TyrR"
                     /protein_id="HAY8829168.1"
                     /translation="MRLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGRIYLNFA
                     ELEFESFSSLMAEIRRIAGVTDVRTVPWMPSEREHLALSALLEALPEPVLSVDMKSKV
                     DMANPASCQLFGQKLDRLRNHTAAQLINGFNFLRWLESEPQDSHNEHVVINGQNFLME
                     ITPVYLQDENDQHVLTGAVVMLRSTIRMGRQLQNVAAQDVSAFSQIVAVSPKMKHVVE
                     QAQKLAMLSAPLLITGDTGTGKDLFAYACHQASPRAGKPYLALNCASIPEDAVESELF
                     GHAPEGKKGFFEQANGGSVLLDEIGEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVR
                     VICATQKNLVELVQKGMFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQ
                     GVPRPKLAADLNTVLTRYAWPGNVRQLKNAIYRALTQLDGYELRPQDILLPDYDAATV
                     AVGEDAMEGSLDEITSRFERSVLTQLYRNYPSTRKLAKRLGVSHTAIANKLREYGLSQ
                     KKNEE"
     gene            complement(4533..5594)
                     /locus_tag="JNZ57_003035"
     CDS             complement(4533..5594)
                     /locus_tag="JNZ57_003035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01620 family protein"
                     /protein_id="HAY8829169.1"
                     /translation="MTEPLKPRIDFDGPLEVDQNPKFRAQQTFDENQAQNFAPATLDE
                     APEEEGQVEAVMDAALRPKRSLWRKMVMGGLALFGASVVGQGVQWTMNAWQTQDWVAL
                     GGCAAGALIIGAGVGSVVTEWRRLWRLRQRAHERDEARDLLHSHGTGKGRAFCEKLAQ
                     QAGIDQSHPALQRWYASIHETQNDREVVSLYAHLVQPVLDAQARREISRSAAESTLMI
                     AVSPLALVDMAFIAWRNLRLINRIATLYGIELGYYSRLRLFKLVLLNIAFAGASELVR
                     EVGMDWMSQDLAARLSTRAAQGIGAGLLTARLGIKAMELCRPLPWIDDDKPRLGDFRR
                     QLIGQVKETLQKGKTPSEK"
     gene            complement(5591..6988)
                     /locus_tag="JNZ57_003036"
     CDS             complement(5591..6988)
                     /locus_tag="JNZ57_003036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjX family protein"
                     /protein_id="HAY8829170.1"
                     /translation="MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLL
                     NIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGV
                     SEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLL
                     NGQRGEWSVKWRMMCEGLDPLAPADENRLADIAAAWTDYLHHCKQQGLHFIQPGRFVL
                     PGDMAGAPALQFFPWPDVDTWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHF
                     LRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLF
                     AATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNG
                     EKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHI
                     RLDAALEFLIGDKLR"
     gene            7143..8141
                     /locus_tag="JNZ57_003037"
     CDS             7143..8141
                     /locus_tag="JNZ57_003037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family transcriptional regulator"
                     /protein_id="HAY8829171.1"
                     /translation="MSPTIYDIARVAGVSKSTVSRVLNKQTNISPEAREKVLRAIEEL
                     QYQPNKLARALTSSGFDAIMVISTRSTKTTAGNPFFSEVLHAITAKAEEEGFDVILQT
                     SHNPAEDLQKCESKIKQKMIKGIIMLSSPADESFFAQLDKYDIPVVVIGKVEGQYAHV
                     YSVDTDNFGDSIALTDTLIESGHQNIACLHAPLDVHVSVDRVNGYKQSLAAHNIAVRD
                     EWIVDGGYTHETALQAARELLSQSPLPEAVFATDSLKLMSIYRAAAEKNIAIPQQLAV
                     VGYSNETLSFILTPAPGGIDVPTQELGQQSCELLFRLISGKPSPQNITVATHMTLK"
     gene            complement(8252..9157)
                     /gene="ompG"
                     /locus_tag="JNZ57_003038"
     CDS             complement(8252..9157)
                     /gene="ompG"
                     /locus_tag="JNZ57_003038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monomeric porin OmpG"
                     /protein_id="HAY8829172.1"
                     /translation="MKKLLPCTALVMCAGMACAQAEEKNYWHFNIGAMYEIENVEGYG
                     EDMDGLAEPSVYFNAANGPWRIALAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLEND
                     DFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFAN
                     HLNTTGYADTRVETETGLQYTFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYL
                     PLTLGNHSLTPYTRIGLDRWSNWDWQDDIECEGHDFNRVGLFYGYDFQNGLSVSLEYA
                     FEWQDHDEGDSDKFHYAGVGVNYSF"
     gene            complement(9202..>9945)
                     /locus_tag="JNZ57_003039"
     CDS             complement(9202..>9945)
                     /locus_tag="JNZ57_003039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY8829173.1"
                     /translation="RVNWAAQILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFL
                     MDEPLSNLDAKLRVQMRAEISKLHQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQ
                     VGAPKTVYNQPANMFVAGFIGSPAMNFIRGTIDGDKFVTETLKLTIPEEKLAVLKTQG
                     SLHKPIVMGIRPEDIHPDAQEENNISAKISVAELTGAEFMLYTTVGGHELVVRAGALN
                     DYHAGENITIHFDMTKCHFFDAETEIAIR"
BASE COUNT         2450 a         2719 c         2352 g         2424 t
ORIGIN      
        1 ctgcctggct gactgatgaa gatattattg attatgagct tacctcacgc aatgaaccat
       61 tcaaaggtac gatcgtatca cgtaagagtg tcgcagcatt aatcacagat atcatcgata
      121 aacctgagaa acacattggt gagaatatag gtatcaatca acccgtgact gatggtgaca
      181 agccattatt catgtaaatc aattacatag ttaccatcgt aatgtactat gtgcagtacg
      241 atttattaaa cttattaagg tgaactgatc aatccgatgc gattaacatg tgtagaacca
      301 gtaagaataa aatacgccat gtatataaca ttacgactta catctaagtc agcataattc
      361 taatatctgc acatcaataa aaatgcaaac aacttccggc aaaaaaagtg atacaagatc
      421 gatgacatag cgttgaagaa aaggatttga taatccgcaa aatttgcaca acactgcctg
      481 taatacttcc tgaaccagag acgatcatga ccgtaacccg cccacgcgcc gaacgcggcg
      541 catttccgcc cggaacagaa cattacggac gttcattatt gggcgcgccg ttaatctggt
      601 ttcctgcccc tgcagccagc cgcgaaagtg gtttgattct ggctggcact cacggtgatg
      661 aaaactcttc ggtcgtcacg ctctcctgtg ctctgcggac gttgacacct tctttgcgcc
      721 gccatcatgt ggtgctgtgt gtgaatcctg acggctgcca gctggggtta cgggccaatg
      781 ctaatggtgt ggatttaaac agaaactttc cggcggcgaa ctggaaggaa ggtgaaacgg
      841 tttatcgctg gaacagcgcc gctgaagaac gtgatgtcgt attactgaca ggtgacaaac
      901 ctggctcaga acctgaaacc caggcgctgt gccagcttat acaccgcatt caacctgcct
      961 gggtggtctc attccacgat ccactggcct gtattgaaga tcccagacac agcgaattag
     1021 gcgaatggct ggcccaggcg tttgaattgc ctctggtaac cagcgtcggt tatgaaacgc
     1081 ctggctcttt cggcagttgg tgtgcagatc tcaacttgca ttgcatcacc gcagagtttc
     1141 cgcccatctc ctccgacgaa gccagcgaaa aatatctctt tgcgatggca tacttgctgc
     1201 gctggcatcc taaagatgca attcgcccgt cgtgaactga agcgccggtt ccacatctac
     1261 cgccagccag gtcggtccgt caagatcggc gaaactgacc tgcggcacca gcggtaaagc
     1321 ggcgctaatg gcacgagagg tacacaacat gcagcccagc atcagactga aaccttgtgc
     1381 acgcgcttca gtcgccagcg ccagcgcttc cgtcagacca ccggttttat cgagcttaat
     1441 gttaaccatc tcatagcgcc ctttcagcgc cttcagattg ctacgtgtat gacaactctc
     1501 atcagcacaa atcggcaacg gatgaataaa attctccagc gccgcatcgt cctgcgcagg
     1561 aaggggttgt tcaagcatcg caacgcctaa atccgccaat agctggcaac gcgccgccaa
     1621 cccttctgca cgccaggatt catttgcatc aacgatcagc gtcgcatcgg gcacagctgt
     1681 gcgaattgcc accatccgct cactaataag atggttatcc agcttcactt tcagtaattt
     1741 cgcgcctgcc tgccagagtg ttgatgcact attggccatc tgatcaggcg taccgatgac
     1801 taccgtctgt gcagtgataa ctgtctcggg aagcgttatg ccgatcaaat cagccagcga
     1861 ttgctgctgt tttcgcgcgg ccagatccca caatgcacaa tccagcgcat tacgtgctgc
     1921 gccggcaggg agaatttttt gcaactcctc ccgtgtcagc cctttctcta attgcgacac
     1981 gacgctcata atttgcgcca ttaccgaggc atcactttct ccataacgcg gatacggcgt
     2041 gcattcgccg gtgcctttaa taccctcttc ttccagttca accaccacca cgcgcgcttc
     2101 actgcgactt ccccgggcaa tcacaaacgg ggtatgtaag ggccaggctt cctcaaatac
     2161 cttaacggtt ctcatcttta ctccttgttg tcgcggtggt ctgcggatta agcgcaaata
     2221 gcgtttgctg tgttattgac agttagcata aactaggtgt gacgttaact atatgtaaac
     2281 aggaaagata atcatgtcac aaaccgttca tttccagggc aacccggtta cagtcgccaa
     2341 ttccatcccg caggcgggta gcaaagcgca gacttttact ctcgtggcaa aagatctgtc
     2401 tgacgtcacc ctcggtcagt ttgcgggtaa acgcaaagtg ctgaacattt tcccgagtat
     2461 tgataccggt gtttgcgccg catcagtacg taagtttaac caactggcaa ccgagatcga
     2521 caacaccgtt gtgctgtgta tttctgccga tctgccgttc gcccagtctc gtttctgcgg
     2581 cgcagaaggt ctgaacaacg ttatcaccct ctccactttc cgtaacgctg aatttctgca
     2641 agccttcggt gtggcaattg ctgatggccc actgaaaggt ctggcagcgc gtgccgttgt
     2701 ggttattgac gaaaatgaca atgtgatttt cagccagctg gtggatgaaa tcaccaccga
     2761 gccggattac gaagcagctc tggctgtact gaaagcataa gttaatatgc ctgatggtgt
     2821 tgcaccatca ggcatattcg cgcttactct tcgttcttct tctggcttaa gccatattcc
     2881 cgcaacttat tggcaatcgc ggtatgtgaa acgccgagac gttttgccag tttgcgcgtg
     2941 ctgggataat tgcgataaag ctgggttaat accgagcgtt caaaacggct ggtgatttcg
     3001 tccagcgaac cttccatcgc atcttcgccc acggctaccg ttgcggcgtc ataatccggc
     3061 aacaaaatat cctgtggacg cagctcataa ccgtccagtt gtgtcagtgc gcgatagata
     3121 gcgttcttta actgccgcac atttcccggc cacgcataac gcgtaagtac agtattcagg
     3181 tcagcggcca gtttcggacg cggcacgccc tgctcgtcgg caaagcgggc gacgaacagc
     3241 tcagttaacg gcatgatgtc ctgcggacag tcacgtagcg gcggcagatt gagcgtcaac
     3301 acgttcagac gataatagag atcttcacgg aacatgcctt tttgcaccag ttcgaccaga
     3361 ttcttctgcg tagcgcaaat cacccgcaca tcgacatgca cctcatggtc ttcgccaacc
     3421 cgacggaaag tgccatcatt aagaaaacgc agtaatttcg cctgcatccg tggtgacatt
     3481 tcccctattt catccaacag caccgaacca ccgttcgcct gctcaaagaa tcctttcttc
     3541 ccttccggag catgaccaaa cagttcactc tcgaccgcat cttccggtat agacgcacag
     3601 ttcagcgcca ggtaaggttt gcccgctctg gggcttgcct gatggcaggc gtaggcaaag
     3661 agatctttac ctgtacctgt gtcacccgta atcagcagcg gcgcgcttag catcgccagt
     3721 ttctgcgcct gttcgacaac atgcttcatt ttcgggctga cggcgacaat ttgactgaag
     3781 gcgctgacgt cctgggcggc gacattttgc aactggcggc ccatacgaat cgttgatcgc
     3841 aacatcacca ccgcaccggt caggacgtgt tgatcatttt catcctgaag ataaacaggc
     3901 gtaatctcca tcaggaaatt ctgcccatta ataacgacat gctcgttatg cgaatcttgc
     3961 ggttcgcttt ccagccaacg taaaaaatta aagccgttaa tcaattgtgc ggcggtatgg
     4021 ttgcgcaggc gatccaattt ttgcccaaaa agctgacagc tcgccgggtt cgccatatcc
     4081 actttgcttt tcatatcgac agagagcaca ggttcgggca acgcctccag taacgcgctc
     4141 aacgccagat gctcacgttc ggaaggcatc cacgggacag tacgcacatc ggtaacacct
     4201 gcaatacggc gtatttcggc catcagactg ctgaaactct caaactccag ttcagcaaaa
     4261 ttgaggtaga ttcgcccaat gggatcaatc tcaataccgc gtaaatcaat gcctcttagc
     4321 acgagtagat cgagtaattc gcgggtcaga ccgagtcggt cttcacaaaa gacttccaga
     4381 cgcatgggaa ccttcacctg aaaaaagaac aattaatatg atgatatgac actatttgga
     4441 tagcaggaag gtttctgtca acaatcattg acacaaagac ggaaaaacgg gcacttcggc
     4501 gtaaagatat ccggtcagca cccgatattg cattattttt cgctgggcgt tttgcctttt
     4561 tgcagcgttt ctttcacctg accgataagc tgacgacgga aatccccgag gcgaggtttg
     4621 tcatcgtcaa tccacggcag cgggcggcaa agctccatag ctttaatccc gagtcgtgcc
     4681 gtcagaagtc cagcaccaat tccctgagct gcgcgggtag acaaacgagc agcgagatct
     4741 tgcgacatcc agtccatccc cacttcgcgc accagttcgc tggctccggc aaaagcgata
     4801 ttcagcaata ccagcttaaa cagacgcaaa cggctgtaat accccagttc aatgccatac
     4861 agcgtggcga tgcgattaat taaacgcaga ttgcgccagg cgataaacgc catatcgacc
     4921 aacgccagcg ggctgaccgc aatcatcaac gttgattccg ccgccgaacg gctgatttcg
     4981 cgccgcgcct gggcatctaa aactggctgg accaaatgcg catacaaact gaccacttca
     5041 cggtcgtttt gcgtttcatg gattgaggca taccagcgtt gcagcgctgg atgagactga
     5101 tcaatacccg cctgctgcgc cagtttttcg caaaatgcgc ggcctttgcc cgtgccgtgg
     5161 ctgtgcaaca aatcgcgcgc ttcgtcgcgt tcatgggcgc gctgtcgcaa gcgccataag
     5221 cgccgccact ctgttaccac agaacctacg ccagcgccga taatcaatgc cccagcggca
     5281 catccaccca gcgccaccca gtcctgagtt tgccaggcat tcattgtcca ctgtacaccc
     5341 tgcccgacaa cgcttgcgcc aaacagagcc agcccgccca tcaccatttt gcgccacagg
     5401 ctgcgtttcg gacgtaacgc tgcatccatt accgcttcaa cttgcccctc ttcttcaggc
     5461 gcttcatcga gcgtggccgg ggcaaaattt tgcgcctgat tttcgtcaaa ggtctgctgc
     5521 gccctgaatt ttggattctg atcgacctcc agcggaccgt cgaaatcaat acgtggtttt
     5581 aacggttcgg tcatcgcaat ttatctccta ttaaaaattc cagcgcggca tcaagacgaa
     5641 tatgcggcag cggtttgtcg acatccatca cctgcgggcg aaacgcttca aactggaacc
     5701 cttgtttgtc ccagaacgcc tgaccgggca aacgcgcagg aacttcaccg ggataaacgg
     5761 tgagtggcgc accatcgctg agccggttac cgcgcaatgc cggaattttc tcgccgttga
     5821 cgtcaataat gccgctggtg gtcgcctgca ccgaggccag ccccagacaa tccatactaa
     5881 tcccttcaaa cgccgcattt tgccaggcat cctgaatcag ttgttgcagt aatgaaacca
     5941 tattggcgtg ctgatcgatg gtcacatggt ccgctttagt ggcagcaaac aatagcttat
     6001 cgataaccgg cgaaaacaaa cgccggaaca aggtacgctg cccgtagtgg aaactttgca
     6061 tcagctgcgt cagtgccaga cgcatatcat taaatgcctg tggcccactg ttgagaggtt
     6121 gcaggcaatc aaccagcaca atctggcggt caaagcgcag aaaatgattc ttatagaacc
     6181 ccttcaccac cttctcgcag taataattaa accgctcgcg cagcattccg gcattggtgt
     6241 gcttatcggc ctgcgccagt ttggactcgc cccaggtatc gacatccggc cacgggaaga
     6301 attgcagcgc gggcgcacct gccatatctc ctggcaagac aaagcgccct ggctgaataa
     6361 agtgcagccc ctgctgttta cagtggtgga gataatcggt ccacgcggcg gcaatgtctg
     6421 ccagccggtt ttcgtcggca ggtgctagcg ggtccagccc ttcgcacatc attcgccatt
     6481 tgaccgacca ttcgccgcgc tgaccattga gtaagcccgt catctggcgt gaccagctta
     6541 aatagtcctg cgccagcatc ggcaggtcga gcaaccattc gccgggataa tccacaatct
     6601 ccagatacag cgtggaggtg tccttgaagt ggcgtagcag cgaatcgttc gatttaaaac
     6661 gtagcgccag gcggatttca ctgacgccgc gcgttggcgt cggccaggcg ggaggatcgc
     6721 catataactg cgccagtcct tcatcatatg tgaagcgcgg aatgccaaag tcacgctgag
     6781 gaatgcgttt tacgcccagc aggcgctctt cacgcaccgc gcttaacagc ggcaagcgtg
     6841 ctccggcgtg aatattgagc aactgattga ccatcgcagt gataaacgct gttttgccgc
     6901 tgcggcttag tccggttacg gcgaggcgca gatgtctgtc gacaccccga ttcaccagcg
     6961 cattaagttc atttttaagt cgcttcattg ctgtcctgtg ctgctctgaa gaccagaaaa
     7021 aaatcattcg taaggatatg aatgtggggg ccaggccatt gattatcaac tgcccgtgtt
     7081 gtcatcgacg ggcgaactcc ataagatgtg tagcattcac gttcggacgg agttcctgac
     7141 ctatgtcccc tactatttat gatattgcca gggttgcagg cgtatcaaaa tccaccgtat
     7201 cacgcgtgct gaataagcaa actaatatct ccccggaagc gcgcgaaaaa gtgttacggg
     7261 ccattgaaga attacagtat cagccaaaca agctggcccg cgcgctgacc tcttcgggtt
     7321 ttgatgccat tatggtgatt tctacccgtt cgaccaaaac tacggcgggt aatccgtttt
     7381 tctctgaagt tttgcatgcc atcaccgcca aagctgaaga ggaaggtttc gacgtgatat
     7441 tgcagacgtc gcacaatccg gcagaagact tacaaaaatg tgaaagcaaa attaagcaga
     7501 aaatgattaa aggcattatt atgctaagtt ctccagcgga tgagtcattt tttgcccaac
     7561 ttgataaata cgatattcct gtcgtggtga ttggcaaagt tgaaggtcaa tatgcccatg
     7621 tttattctgt cgataccgat aattttggcg acagcattgc gttgaccgat acattaattg
     7681 aaagtgggca tcaaaatatt gcctgcctgc atgctccgct tgatgtccat gtttcagtgg
     7741 atcgggtaaa tggttataag cagagcctgg ctgcgcataa tattgcagtg cgtgatgaat
     7801 ggattgttga cggtggttat acccatgaaa cagcactgca agccgcgaga gaattattaa
     7861 gccagtcacc gttgcctgag gcggtgtttg ccactgacag tctgaaatta atgagtattt
     7921 atcgtgcggc ggcagagaaa aatattgcta ttccgcagca gttagcggtg gtgggttata
     7981 gtaatgaaac gctgtcgttt attttaacac ctgcaccggg cggcatcgat gttccgacgc
     8041 aggagttagg tcaacaaagc tgcgagttat tattccgctt aatttctgga aaaccgtcac
     8101 cacagaatat taccgttgcc acgcatatga cgctgaaata aataccagct accttgcctg
     8161 aatgccggat gcgatgctag cgcatcttat ccggcctaca tttatagatc ggataaagta
     8221 ctcgcgccgc atccggcaat ttagcccatt atcagaacga gtaatttacg ccgacacctg
     8281 cataatggaa tttatcactg tcgccttcgt cgtgatcctg ccactcaaac gcgtattcca
     8341 gcgaaacgga aagtccgttc tggaaatcat aaccgtaaaa taaacctaca cggttaaaat
     8401 catggccttc acattcaata tcatcctgcc agtcccagtt actccagcga tccagcccaa
     8461 tgcgcgtata cggcgtcaac gagtggttgc cgagcgtcag cggcaaatag gcgcgaattt
     8521 cttgcgtgga aaactcaccg ttattgcggc tgtcgtccat attgaagccg cgctcgagat
     8581 aatagttcac tcgcaaggca accgtttcgt tgaaggtata ttgcagacct gtttccgttt
     8641 cgacacgggt atcagcgtaa ccggtagtgt tcagatggtt ggcaaattta tacatcgaca
     8701 accaaccgtt gaaacgtaaa tcgtcagtca gtttcacatc ccagtctggc gcgattttcc
     8761 agcgctgcat attcgccgtg tctttacccg gttcatcaac gtagtgataa ccataattac
     8821 ggaaaccgcc ggtcaggccg aaactgaaat catcgttttc gaggaactga taatgcacct
     8881 ccagctccgg gcgatcaaac cacgttccac gtttacccgc gctataatct accggccctt
     8941 cctgataata ggccagagca attctccacg gcccgttggc ggcattaaaa tagactgaag
     9001 gctccgccag cccatccata tcttcgccat aaccctcgac gttttctatt tcgtacatcg
     9061 cgccgatatt aaagtgccag tagttctttt cctcggcctg tgcgcaggcc attcccgcac
     9121 acatcaccag tgcggtacag ggtaataact ttttcattat tgttccttgt attattctgg
     9181 gggaatgcct tccccctgta tttagcgaat tgctatttcc gtttctgcat caaagaaatg
     9241 acatttcgtc atatcaaaat gaatagtgat attttctcct gcatgataat catttaacgc
     9301 accagcacgg accactaact cgtgcccccc aaccgtggtg tagagcataa attccgcacc
     9361 ggttaattct gccacgctaa ttttggcgga aatgttattt tcctcttgcg cgtccggatg
     9421 aatatcttcc ggacgtattc ccatcacgat gggcttatgc aaacttccct gtgttttcag
     9481 aaccgctaat ttctcttcgg gaatggttaa tttaagcgtt tccgtaacga atttatcgcc
     9541 atcgatcgtg ccacgaataa aattcatcgc cggtgatcca ataaatccgg caacaaacat
     9601 attcgctggt tggttataaa ccgttttcgg cgcaccaact tgctgaacaa tcccatcctt
     9661 cataatcaca atccgcgtcg ccatggtcat cgcttcggtc tgatcgtggg tcacgtagat
     9721 catggtggta ttcagcttct ggtgtagctt gctgatctct gcgcgcattt gcacgcgcag
     9781 cttggcatca aggttagaga gcggttcatc cattaaaaac acgcccgctt cgcgcacaat
     9841 cgcccgcccg agcgccacac gctggcgttg cccgccggaa agcgcgcccg gcttgcgttt
     9901 caggtactca cgcaggccga gaatttgcgc cgcccagttc acccg
//
LOCUS       DADMHC010000149         9827 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.151, whole genome shotgun sequence.
ACCESSION   DADMHC010000149 DADMHC010000000
VERSION     DADMHC010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9827)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9827)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9827
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.151"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(175..1524)
                     /gene="lysC"
                     /locus_tag="JNZ57_003040"
     CDS             complement(175..1524)
                     /gene="lysC"
                     /locus_tag="JNZ57_003040"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-sensitive aspartokinase 3"
                     /protein_id="HAY8829174.1"
                     /translation="MSEIVVSKFGGTSVADFDAMNRSADIVLSDANVRLVVLSASAGI
                     TNLLVALAEGLEPGERFEKLDAIRNIQFAILERLRYPNVIREEIERLLENITVLAEAA
                     ALATSPALTDELVSHGELMSTLLFVEILRERDVQAQWFDVRKVMRTNDRFGRAEPDVA
                     ALAELAALQLLPRLNDGLVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVD
                     IWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMATFGAKVLHPATLLPAVRSDIPVFV
                     GSSKDPRAGGTLVCNKTENPPLFRALALRRNQTLLTLHSLNMLHSRGFLAEVFGILAR
                     HNISVDLITTSEVSVALTLDTTGSTSTGDTLLTQSLLMELSALCRVEVEEGLALVALI
                     GNDLSKACGVGKEVFGVLEPFNIRMICYGASSHNLCFLVPGEDAEQVVQKLHSNLFE"
     gene            2049..3698
                     /gene="pgi"
                     /locus_tag="JNZ57_003041"
     CDS             2049..3698
                     /gene="pgi"
                     /locus_tag="JNZ57_003041"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HAY8829175.1"
                     /translation="MKNINPTQTAAWQALQKHFDEMKDVTIADLFAKDGDRFSKFSAT
                     FDDQMLVDYSKNRITEETLAKLQDLAKECDLAGAIKSMFSGEKINRTENRAVLHVALR
                     NRSNTPILVDGKDVMPEVNAVLEKMKTFSEAIISGEWKGYTGKAITDVVNIGIGGSDL
                     GPNMVTEALRPYKNHLNMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN
                     AHSARDWFLKAAGDEKHVAKHFAALSTNAKAVGEFGIDTANMFEFWDWVGGRYSLWSA
                     IGLSIVLSIGFDNFVELLSGAHAMDKHFSTTPAEKNLPVLLALIGIWYNNFFGAETEA
                     ILPYDQYMHRFAAYFQQGNMESNGKYVDRNGNVVDYQTGPIIWGEPGTNGQHAFYQLI
                     HQGTKMVPCDFIAPAITHNPLSDHHQKLLSNFFAQTEALAFGKSREVVEQEYRDQGKD
                     PATLDYVVPFKVFEGNRPTNSILLREITPFSLGALIALYEHKIFTQGVILNIFTFDQW
                     GVELGKQLANRILPELKDDKEISSHDSSTNGLINRYKAWRG"
     gene            4160..4402
                     /locus_tag="JNZ57_003042"
     CDS             4160..4402
                     /locus_tag="JNZ57_003042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829176.1"
                     /translation="MKKVLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSA
                     TSVSTVSSAVGVALAATGGGDGSNTGTTTTTTTSTQ"
     gene            4516..5153
                     /locus_tag="JNZ57_003043"
                     /pseudo
     CDS             4516..5153
                     /locus_tag="JNZ57_003043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418451.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YjbF family lipoprotein"
     gene            5150..5887
                     /locus_tag="JNZ57_003044"
     CDS             5150..5887
                     /locus_tag="JNZ57_003044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis GfcC family protein"
                     /protein_id="HAY8829177.1"
                     /translation="MIKQTFVALLLSVGASSVFAAGTVKVFSNGSSEAKTLTGAEHLI
                     DLVGQPRLANSWWPGAVISEELATAAALRQQQALLTRLAEQAADSSADDAAAINALRQ
                     QIQALKVTGRQKINLDPDIVRVAERGNPPLQGNYTLWVGPPPSTVTLFGLISRPGKQP
                     FTPGRDVASYLSGQNLLSGADRSYAWVVYPDGRTQKAPVAYWNKSHVEPMPGSIIYVG
                     LADSVWSETPDALNADILQTLTQRIPQ"
     gene            5887..7983
                     /locus_tag="JNZ57_003045"
     CDS             5887..7983
                     /locus_tag="JNZ57_003045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbH domain-containing protein"
                     /protein_id="HAY8829178.1"
                     /translation="MKKRHLLSLLALGISMACYGETYPAPIGPSQSDFGGVGLLQTPT
                     ARMAREGELSLNYRDNDQYRYYSASVQLFPWLETTLRYTDVRTRQYSSVEAFSGDQTY
                     KDKAFDLKLRLWEESYWLPQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGY
                     LGTSGNVKNPLCSASDKYCYRDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRL
                     KLEYEGNNYQQDFVGKLEQKSKFNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFN
                     DLRPSYNDNARPQYQPQPQDAILQHSVVANQLTLLKYNAGLADPQIQAKGDTLYVTGE
                     QVKYRDSREGIIRANRIVMNDLPDGIKTIRITENRLNMPQVTTETDVASLKNHLAGEP
                     LGHETKLAQKRVEPVVPQSTEQGWYIDKSRFDFHIDPVLNQSVGGPENFYMYQLGVIG
                     MADLWLTDHLLTTGSLFANLANNYDKFNYTNPPQDSHLPRVRTHVREYVQNDVYVNNL
                     QANYFQHLGNGFYGQVYGGYLETMFGGAGAEVLYRPLDSNWAFGLDANYVKQRDWRSA
                     KDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVV
                     GGYATITNVLKEEYGEGDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGR
                     KFQLYDMTSDRSVNFR"
     gene            complement(8030..8308)
                     /locus_tag="JNZ57_003046"
     CDS             complement(8030..8308)
                     /locus_tag="JNZ57_003046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829179.1"
                     /translation="MKRNLIKVVKMKPYFAALMLSVSVLPAYAGPLGTADKADLPQSN
                     VSSPMMAQSLRQPDLQPISTDRKTECFRLYTPDRKPGVNCVPDGSTGH"
     gene            8578..8976
                     /gene="psiE"
                     /locus_tag="JNZ57_003047"
     CDS             8578..8976
                     /gene="psiE"
                     /locus_tag="JNZ57_003047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate-starvation-inducible protein PsiE"
                     /protein_id="HAY8829180.1"
                     /translation="MTSLSRPRVEFISTILQTVLNLGLLCLGLILVVFLGKETVHLAD
                     VLFAPEQTSKYELVVYFLYFEFIALIVKYFQSGFHFPLRYFVYIGITAIVRLIIVDHK
                     SPLDVLIYSAAILLLVITLWLCNSKRLKRE"
     gene            complement(9020..9827)
                     /locus_tag="JNZ57_003048"
                     /pseudo
     CDS             complement(9020..9827)
                     /locus_tag="JNZ57_003048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313041.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
BASE COUNT         2402 a         2544 c         2597 g         2284 t
ORIGIN      
        1 cttctcttaa ctatttatct ctttcgataa ttaattagag atgcagataa aaaaattaaa
       61 ggcaattatt ctcgataaag acgttggtta acagagtaca ggctcgttta ttgataagca
      121 tagtgacaag aaaatcaata cggcccgaaa tatagcttcc aggccataca gtatttactc
      181 aaacaaatta ctatgcagtt tttgcaccac ctgctcggca tcttcgccgg gcaccaggaa
      241 gcacaggtta tggctggatg cgccgtaaca aatcatgcga atgttgaacg gttccagtac
      301 gccgaatacc tctttgccaa cgccgcaggc ttttgacagg tcattgccaa tcaacgcgac
      361 cagcgccaga ccttcttcta cttccacccg gcacagtgcg gaaagctcca tcagcagaga
      421 ttgcgtcagc aacgtatcgc cagtggaggt tgaaccggtg gtatcaaggg ttaatgccac
      481 gctcacttct gacgtggtga ttaagtctac cgaaatatta tgccgcgcga ggatgccgaa
      541 aacttccgcg aggaagccgc gagaatgcag catattcagg ctgtgcaaag tgagcagagt
      601 ctgattgcga cgaagcgcca gcgcgcggaa cagcggagga ttttcagttt tattgcacac
      661 cagcgtacca cctgcgcgtg ggtctttgct ggagccgaca aagaccggga tatcgctgcg
      721 tactgcgggt agcaacgttg ccggatgcag tacttttgca ccaaaagttg ccatctctgc
      781 cgcttcggca aacgcgattt catcaatgcg ttttgctgcg gaaactacgc gtggatcggt
      841 ggtgtagatg cccgggacgt cggtccagat atcaacacga gatgcgtgta aagcctccgc
      901 cagcaaggct gccgtataat cgctgcctcc acggccaagc gtcgttgtac gacctttatt
      961 ttcgctaccg ataaatccct gggtgatcac taagccgtca ttgaggcgtg ggagcagctg
     1021 cagcgcggcc agttccgcca gcgcggctac atctggctct gcacgaccaa atcggtcgtt
     1081 ggtacgcatc actttacgta catcaaacca ctgtgcctga acatcgcgtt cgcgcaggat
     1141 ttcgacaaac agcagggtcg acatcagctc gccgtggctg accagctcat ctgtcagcgc
     1201 cggagacgtt gccagcgccg ccgcttctgc cagaacagta atgttctcca gcagacgttc
     1261 aatctcttca cggataacgt tcgggtaacg cagacgttcc agaatggcaa actggatgtt
     1321 gcgaatagcg tcgagttttt cgaatcgctc gccaggttcc agcccttccg ctaaagcgac
     1381 cagcagatta gtgataccag cagaagccga gaggactact aaacgcacgt tggcatcaga
     1441 aagcacaata tcagcgctgc ggttcatggc gtcaaaatca gctacgctgg taccgccaaa
     1501 tttggagaca acaatttcag acataactac ctcgtgtcag gggatccatt ttcagccttg
     1561 gcacaaggga agagcggaag acgggtgggc gcagagcgat acttcgctac tattttcacc
     1621 cagaagtgct ccaccacttg cgaaacgccc gactgcgaac gcttctggtg acaacccagg
     1681 ggattcagcc cctgtagccg atgatgaacg tggccagccg ttcaatcacc tcggcgatgc
     1741 accccctcag gtgttatcac aggactggct cctccaacac cgttacttgg gcaacgcgcc
     1801 tcttctggcc tgcgctagcg caggtagtac atttataaat aaagggtgag cggggcggtt
     1861 gtcaacgacg gggtcatgcg gatttttcat ccactcctgg cggtcagtag ttcagctaat
     1921 aaatgcttca ctgcgctaag ggtttacact caacattacg ctaacggcac taaaaccatc
     1981 acatttttct gtgactggcg ctacaatctt ccaaagtcac aattctcaaa atcagaagag
     2041 tattgctaat gaaaaacatc aatccaacgc agaccgctgc ctggcaggca ctacagaaac
     2101 acttcgatga aatgaaagac gttacgatcg ccgatctttt tgctaaagac ggcgatcgtt
     2161 tttctaagtt ctccgcaaca ttcgacgatc agatgctggt ggattactcc aaaaaccgca
     2221 tcactgaaga gacgctggcg aaattacagg atctggcgaa agagtgcgat ctggcgggcg
     2281 cgattaagtc gatgttctct ggcgagaaga tcaaccgcac tgaaaaccgc gccgtgctgc
     2341 acgtagcgct gcgtaaccgt agcaataccc cgattctggt tgatggcaaa gacgtaatgc
     2401 cggaagtcaa cgcggtgctg gagaagatga aaaccttctc ggaagcgatt atctccggtg
     2461 agtggaaggg ttataccggc aaagcaatca ctgacgtagt gaacatcggg atcggtggtt
     2521 ctgacctcgg cccgaacatg gtgaccgaag cactgcgtcc gtacaaaaat cacctgaaca
     2581 tgcactttgt ttctaacgtc gatgggactc acatcgctga agtgctgaaa aaagtaaacc
     2641 cggaaaccac gctgttcttg gtagcatcta aaaccttcac cactcaggaa actatgacca
     2701 acgcccatag cgcgcgtgac tggttcctga aagcggcagg tgatgaaaaa cacgttgcaa
     2761 aacactttgc ggcgctttcc accaatgcca aagccgttgg cgagtttggt attgatactg
     2821 ccaacatgtt cgagttctgg gactgggtcg gcggccgtta ctctttgtgg tcagcgattg
     2881 gcctgtcgat tgttctctcc atcggctttg ataacttcgt tgaactgctt tctggcgcac
     2941 acgcgatgga caagcatttc tccaccacgc ctgccgagaa aaacctgcct gtcctgctgg
     3001 cgctgattgg catctggtac aacaatttct ttggtgcgga aactgaagcg attctgccgt
     3061 atgaccagta tatgcaccgt ttcgcggcgt acttccagca gggcaatatg gagtccaacg
     3121 gtaagtatgt tgaccgtaac ggtaacgttg tggattacca gactggcccg attatctggg
     3181 gtgaaccagg cactaacggt cagcacgcgt tctaccagct gatccaccag ggaaccaaaa
     3241 tggtaccgtg cgatttcatc gccccggcta tcacccataa cccgctctct gatcaccacc
     3301 agaaactgct gtctaacttc ttcgcccaga ccgaagcgct ggcgtttggt aaatcccgcg
     3361 aagtggttga gcaggaatat cgcgatcagg gtaaagatcc ggcaacgctt gactacgtgg
     3421 tgccgttcaa agtgttcgaa ggtaaccgcc cgaccaactc catcctgctg cgcgaaatca
     3481 ctccgttcag cctgggggcg ttgattgcgc tgtatgagca caaaatcttt actcagggcg
     3541 tgatcctgaa catctttacc ttcgaccagt ggggcgtgga gttgggtaaa caactggcga
     3601 accgtattct gccagagctg aaagatgaca aagaaatcag cagccacgat agctcgacca
     3661 atggtctgat taaccgctat aaagcgtggc gcggttaatc atcatgcgtg cctgatgccg
     3721 atatgtaggc cggataaggc gtttacgccg catccggcaa ccggagcctg atgccaatat
     3781 cgacattaat gcatagtatg aggagttaaa taaccttaaa aacaatgccg acaataagtc
     3841 ggcattgttt tatcagataa atccccttgt ctgtgattta acggaaatca taccgtgagg
     3901 ttaatcctaa aatagatttt taatcgttgt ttatttcgga gaatacgcag attaattact
     3961 tttgttttta ttttaagttt atgattttta ttgttattta aatataagtt gaagcttata
     4021 tttgatattc attccaattg tcctaaaacg ccatcgctaa ttccccgcgc cgtaattcgc
     4081 atgctttagt tgtgtatact cgatcccgcc cgaaatgttt ttgggtaaat ctccattcat
     4141 tcaatgaagg gaaattgtta tgaaaaaagt tctgtatggc atttttgcca tatctgcgct
     4201 tgcggcgact tctgcgtggg ctgcacctgt acaggtgggc gaagcggcag ggtcggcagc
     4261 aacgtcggtt tcggcgggta gttcctccgc gaccagcgtc agcaccgtaa gctcggcggt
     4321 gggtgtcgcg ctcgcggcaa ccggtggcgg tgatggttct aataccggga ccaccacaac
     4381 cacgaccacc agtacccagt aataaagtat gtatccccaa aataatttga gtcattgcat
     4441 ctgtggcttg aagtatgaag ggatttacca taaccacact ccggtgtggt tattctgccc
     4501 ctctggagaa gagtcgtgaa gcgacctgca ctcattctta tctgcctgct attacaggcc
     4561 tgttcagcca gactaaagag ctgggcaatt cactgtggga cagtctgttc ggcacgccag
     4621 gcgtacagct gacggacgat gatattcaaa atatgcccta cgccagccag tacatgcagc
     4681 ttaatggcgg gccgcaattg tttgtggtgc tggccttcgc tgaagacgga caacaaaaat
     4741 gggtcactca ggatcaagcc actcttgtca cacaacatgg tcgtctggtg aagactttgc
     4801 ttggcggcga caacctgatt gaagtgaata accttgccgc cgacccgctg attaaacccg
     4861 cacaaattgt tgatggtgca acatggacgc gcacgatggg ctggaccgag taccagcagg
     4921 tacgctacgc caccgcacgc tcagtcttca aatgggatgg caccgatacc gtcaaagtcg
     4981 gcagcgatga aaccctggtt cgcgtgctgg acgaagaagt ctccaccgac caggcgcgct
     5041 ggcataaccg ctactggatc gacagcgaag ggcaaattcg ccagtcggaa cagtatctcg
     5101 gcgcggatta tttcccggtg aaaaccactc tcatcaaggc ggcaaaacaa tgattaaaca
     5161 aacttttgtc gcgttgcttt tgagtgtggg agcgtcatcg gtcttcgcgg caggaaccgt
     5221 caaggtgttc agcaatggca gcagtgaggc caaaacacta acaggcgcag agcatttaat
     5281 cgatctggta ggccaaccgc ggctggcaaa cagctggtgg cccggtgcgg tgattagcga
     5341 agagctggca acggcggcag cattgcgtca gcagcaggcg ttgctgacac ggctggctga
     5401 acaggccgca gactccagcg ccgacgatgc cgccgccatt aacgccttac gccagcaaat
     5461 tcaggcgttg aaagtgacgg gcaggcaaaa aatcaatctt gatcccgata tcgtgcgcgt
     5521 tgccgaacgc ggtaacccac cgttgcaggg caactacacg ctgtgggtcg gaccaccgcc
     5581 gtccacggtc acgttgttcg ggcttatcag ccgtcctggc aagcagccat tcactccagg
     5641 tcgcgacgtg gcgagctatc tctccgggca gaacctgctt agcggtgcgg atcgcagcta
     5701 cgcgtgggtg gtttacccgg acggacgcac gcaaaaagcg ccggtggctt actggaacaa
     5761 gagtcacgta gagccgatgc ccggcagcat tatttatgtt ggcctcgcgg actccgtctg
     5821 gagtgagacg cctgatgccc ttaacgccga cattcttcag actctgacgc agcggatacc
     5881 ccaataatga aaaaaagaca tctgcttagc ttactggcgc tgggcattag catggcttgc
     5941 tacggcgaaa catatcctgc gcccattggc ccgtcgcagt cggatttcgg tggcgtagga
     6001 ttattacaaa cgcccaccgc acgcatggcg cgggaagggg agttgagcct gaactatcgc
     6061 gataacgatc agtaccgtta ttactcagct tcagtgcaac tcttcccgtg gctggaaaca
     6121 acgctgcgct acaccgacgt gcgcacccgg cagtacagca gcgtcgaagc gttctctggc
     6181 gatcaaacgt ataaagataa agccttcgat ctcaaactgc gtttgtggga agagagttac
     6241 tggctgccgc aagtggcggt tggtgcgagg gatatcggcg gtacggggct gtttgatgcg
     6301 gaatatcttg ttgccagcaa agcctggggg ccgttcgatt ttacgctcgg cctgggctgg
     6361 ggttatctgg gcaccagcgg taatgtgaaa aatccgctct gttcagccag tgataaatat
     6421 tgctatcgcg ataacagcta caaacaggcg ggatctatcg acggtagcca gatgttccac
     6481 ggtcctgcct cactgtttgg cggcgtggaa taccagacgc cctggcaacc gctgcgcctg
     6541 aaactggagt atgaaggcaa taattatcag caggattttg tcgggaagct ggagcaaaaa
     6601 agtaagttta acgtcggtgc gatttatcgc gttaccgatt gggccgacgt taaccttagc
     6661 tatgaacgtg gcaacacctt tatgtttggc gtcacgctgc gcaccaactt taacgatctg
     6721 cgcccgtctt acaacgataa cgcccgcccg caatatcaac cgcagccgca ggatgccatt
     6781 ttgcagcatt cggtggtggc gaatcagtta acgctgttga aatacaatgc cggacttgcc
     6841 gatccgcaga tccaggcgaa aggcgatacg ctgtatgtca ccggcgagca ggtgaaatat
     6901 cgtgattcgc gcgaagggat catccgtgct aatcggatcg tgatgaacga tctgccggat
     6961 gggatcaaaa cgatccgcat tacggaaaat cgtcttaaca tgccgcaggt gacgacggaa
     7021 accgatgtcg ccagcctgaa aaatcatctc gccggagagc cgttgggcca cgaaacgaag
     7081 ctggcgcaaa aacgcgtcga gccagtggtt ccgcagtcca ccgagcaggg ctggtatatc
     7141 gacaaatcac gctttgattt ccatatcgat ccggtgctga accagtcggt cggtggcccg
     7201 gaaaactttt acatgtatca gctgggcgtg ataggaatgg cagatttgtg gctgacggac
     7261 catctgctga ccaccggcag cctgtttgca aatcttgcca acaactacga caagtttaac
     7321 tacaccaatc cgccgcagga ctcgcactta ccgcgcgttc gtacccatgt gcgcgagtat
     7381 gtgcagaacg atgtctatgt gaataacctg caagccaact acttccagca tctgggcaac
     7441 ggcttctacg gtcaggtcta tggaggttat ctcgaaacca tgtttggcgg tgcgggggcc
     7501 gaagtgttgt atcgtccgct ggacagtaac tgggcgtttg gtctggatgc caactacgtt
     7561 aaacagcgcg actggcgtag tgcaaaagat atgatgaaat tcaccgacta cagcgtgaaa
     7621 accggacatc tgaccgccta ctggacgcca tctttcgccc aggacgtgtt ggtgaaagcc
     7681 agcgtcgggc agtatctggc aggggataaa ggcggcacgc tggagatcgc caaacgcttt
     7741 gacagcggcg tggtggtggg tggctatgcc acgatcacca acgttttgaa agaggagtac
     7801 ggcgaagggg acttcaccaa aggcgtgtat gtctcggtac cgttggatct cttctcgtct
     7861 ggcccgacac gcagccgtgc ggcgattggc tggacgccgc tgacgcgtga cggtggtcag
     7921 caacttgggc gtaagttcca gttgtatgac atgaccagcg accgtagcgt caatttccgc
     7981 taagtcatgg gaaaggtgcc agttttcgca ctcactggca ccttcattct taatggcctg
     8041 tcgagccatc aggaacgcag ttcacccccg gtttgcgatc tggtgtgtaa aggcgaaaac
     8101 attctgtctt cctgtccgtc gatatcggtt gcaggtctgg ttgcctgagc gactgggcca
     8161 tcattgggct ggagacattg ctttgcggta ggtcggcttt atcagcagta ccgagcggac
     8221 cagcataagc aggaagaaca gagactgata acatcaaagc agcaaaataa ggcttcattt
     8281 ttaccacctt tatcaggtta cgtttcattt gttccagagg aacattgtcg atttttcgcg
     8341 cattactggt ggctgggaat cacctgaatg ggtgattttt gaattaccgg cttgggtgcg
     8401 gtttgtcttg ccggatgcgc cgccaggcgc ggcttatccg gcctacgggt aggtatatcc
     8461 ggctttggtg gaggcgcgct ccaaatccag gttgaacaaa acatacacaa aaaatataga
     8521 tctccgtcac atttttgcgt tatacaggaa gctcgccact gtgaaggagg tactgctatg
     8581 acgtcactct ctcgtccgcg cgtggagttt atctccacca ttttgcagac cgtactcaat
     8641 cttggcctgc tgtgcctcgg cctgattttg gttgtcttcc tcggcaaaga aacggtgcat
     8701 ctggcagatg tgctgttcgc gccagaacaa accagcaaat atgagctggt ggtttacttt
     8761 ctctatttcg aatttatcgc gctgattgtg aagtactttc agtccggttt tcacttcccg
     8821 ctacgttact ttgtctatat tgggatcacc gccattgtgc gcttgatcat cgtcgatcat
     8881 aaatcgccac tggatgtgtt gatctactcg gctgcgatcc tgttactggt gatcactctg
     8941 tggctgtgta attcgaaacg gctgaagcgg gagtaaaaag acagcacgcc gaactggcgc
     9001 ggcgtgctgg acaggaagat tacagcgtag cagtttgttg tgttttcttc gtttccggtt
     9061 cccagagggc ttccagctcc tcaagggttt tacctttggt ttccgggaca aatttccaca
     9121 taaatagtgc tgccagaacg cccatacacc cgtaaatcca gtaggagaaa ccgttgtgga
     9181 aatgggccac cagctaggag tttttgtcca tcatcgggaa ggtccaggag acgaagtagt
     9241 tcgccagcca ctgggccgcc accgcgattg ccagcgcctt accacgaata gcattcggga
     9301 agatttccga cagcagtacc cagcataccg gaccccagga catggcaaag gcagcaacat
     9361 agaacagcat cgacagtagc gccacaatac ccggtgcctg agtgtaaaac gcggtaccga
     9421 ggctaaacat accgattgcc attccgagtg cgccgataat ttgcagtggc ttacgaccaa
     9481 atttatccac cgtcataatt gccagaacgg tgaaggtgag gttgataact ccgacaataa
     9541 tggtctgcaa cagcgcgata tccgtgctgg cccccagcgt tttgaacact tccggcgcgt
     9601 agtacagcac cacattgatg ccgacaaatt gctggaagat ggagagcata acgccgatga
     9661 caatcacgcc cacgccaaac atcagcagac gaccaccggt tttgcggcca tgatccaggg
     9721 agtgtttaat ttcctgtact gcctgagttg caagcgtgtt gcccataatt ttgcgcagga
     9781 tactttccgc ctgttcttgc ttgccgcgtg acatcagcca gcgagga
//
LOCUS       DADMHC010000150         9775 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.152, whole genome shotgun sequence.
ACCESSION   DADMHC010000150 DADMHC010000000
VERSION     DADMHC010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9775)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9775)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9775
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.152"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(81..854)
                     /gene="uxuR"
                     /locus_tag="JNZ57_003049"
     CDS             complement(81..854)
                     /gene="uxuR"
                     /locus_tag="JNZ57_003049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Uxu operon transcriptional regulator"
                     /protein_id="HAY8829181.1"
                     /translation="MKSATSAQRPYQEVGAMIRDLIIKTPYNPGERLPPEREIAEMLD
                     VTRTVVREALIMLEIKGLVEVRRGAGIYVLDSSGSHNTDSPDANVCNDAGPFELLQAR
                     QLLESNIAEFAALQATREDIVKMRQALQLEERELASSAPGSSESGDMQFHLAIAEATH
                     NSMLVELFRQSWQWRENNPMWIQLHSHLDDSLYRKEWLGDHKQILAALIKKDARAAKL
                     AMWQHLENVKQRLLEFSNVDDIYFDGYLFDSWPLDKVDA"
     gene            complement(1069..2529)
                     /locus_tag="JNZ57_003050"
     CDS             complement(1069..2529)
                     /locus_tag="JNZ57_003050"
                     /EC_number="1.1.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructuronate reductase"
                     /protein_id="HAY8829182.1"
                     /translation="MTTIVDSNLPVARPSWDHSRLESRIVHLGCGAFHRAHQALYTHH
                     LLESTDSDWGICEVNLMPGNDRVLIENLKKQQLLYTVAEKGAESTELKIIGSMKEALH
                     PEIDGCEGILNAMARPQTAIVSLTVTEKGYCADAASGQLDLNNPLIKHDLENPTAPKS
                     AIGYIVEALRLRREKGLKAFTVMSCDNVRENGHVAKVAVLGLAQARDPQLAAWIEENV
                     TFPCTMVDRIVPAATPETLQEIADQLGVYDPCAIACEPFRQWVIEDNFVNGRPDWDKV
                     GAQFVADVVPFEMMKLRMLNGSHSFLAYLGYLGGYETIADTMTNPDYRKAAFALMMQE
                     QAPTLSMPEGTDLKAYATLLIERFSNPSLRHRTWQIAMDGSQKLPQRLLDPVRLHLQN
                     GGSWRHLALGVAGWMRYTQGVDEQGNAIDVVDPMLAEFQKINAQYQGADRVKALLGLS
                     GIFADDLPQNADFVGAVTAAYQQLCERGARECVAAL"
     gene            complement(2610..3794)
                     /gene="uxuA"
                     /locus_tag="JNZ57_003051"
     CDS             complement(2610..3794)
                     /gene="uxuA"
                     /locus_tag="JNZ57_003051"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709912.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HAY8829183.1"
                     /translation="MEQTWRWYGPNDLVSLADVRQAGATGVVTALHHIPNGEVWSVEE
                     ILKRKAIVEDAGLVWSVVESVPIHEDIKTHTGNYEQWIANYQQTLRNLAQCGIRTVCY
                     NFMPVLDWTRTDLEYVLPDGSKALRFDQIEFAAFEMHILKRPGAEADYTEEEIAQAAE
                     RFATMSDEDKARLTRNIIAGLPGAEEGYTLDQFRKHLELYKDIDKAKLRENFAVFLKA
                     IIPVAEEVGVRMAVHPDDPPRPILGLPRIVSTIEDMQWMVDTVNSMANGFTMCTGSYG
                     VRADNDLVDMIKQFGPRIYFTHLRSTMREDNPKTFHEAAHLNSDVDMYEVVKAIVEEE
                     HRRKAEGKEDLIPMRPDHGHQMLDDLKKKTNPGYSAIGRLKGLAEVRGVELAIQRAFF
                     SR"
     gene            4134..4338
                     /locus_tag="JNZ57_003052"
                     /pseudo
     CDS             4134..4338
                     /locus_tag="JNZ57_003052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031542.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(4581..5483)
                     /gene="fimH"
                     /locus_tag="JNZ57_003053"
     CDS             complement(4581..5483)
                     /gene="fimH"
                     /locus_tag="JNZ57_003053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria D-mannose specific adhesin FimH"
                     /protein_id="HAY8829184.1"
                     /translation="MKRVITLFAVLLMGWSVNAWSFACKTANGTAIPIGGGSANVYVN
                     LAPVVNVGQNLVVDLSTQIFCHNDYPETITDYVTLQRGSAYGGVLSNFSGTVKYSGSS
                     YPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNS
                     DDFQFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYL
                     SGTTADAGNSIFTNIASFSPAQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTAN
                     YARTGGQVTAGNVQSIIGVTFVYQ"
     gene            complement(5503..6006)
                     /gene="fimG"
                     /locus_tag="JNZ57_003054"
     CDS             complement(5503..6006)
                     /gene="fimG"
                     /locus_tag="JNZ57_003054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria minor subunit FimG"
                     /protein_id="HAY8829185.1"
                     /translation="MKWRKRGYLLAAILALASATIQAADVTITVNGKVVAKPCTVSTT
                     NATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQG
                     TAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVI
                     SITYTYS"
     gene            complement(6019..6549)
                     /gene="fimF"
                     /locus_tag="JNZ57_003055"
     CDS             complement(6019..6549)
                     /gene="fimF"
                     /locus_tag="JNZ57_003055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709916.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria minor subunit FimF"
                     /protein_id="HAY8829186.1"
                     /translation="MRNKPFYLLCAFLWLAVSRVLAADSTITIRGYVRDNGCSVAAES
                     TNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLA
                     LENTVSAASGLGIQLLNEQQNQIPLNALSSAISWTTLTPGKPNTLNFYARLMATQVPV
                     TAGHINATATFTLEYQ"
     gene            complement(6559..9194)
                     /gene="fimD"
                     /locus_tag="JNZ57_003056"
                     /pseudo
     CDS             complement(6559..9194)
                     /gene="fimD"
                     /locus_tag="JNZ57_003056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418737.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis usher protein FimD"
     gene            complement(9261..>9775)
                     /gene="fimC"
                     /locus_tag="JNZ57_003057"
     CDS             complement(9261..>9775)
                     /gene="fimC"
                     /locus_tag="JNZ57_003057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418736.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type 1 fimbria chaperone FimC"
                     /protein_id="HAY8829187.1"
                     /translation="WMENADGVKDGRFIVTPPLFAMKGKKENTLRILDATNNQLPQDR
                     ESLFWMNVKAIPSMDKSKLTENTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFRRSA
                     NSLTLINPTPYYLTVTELNAGTRVLENALVPPMGESTVKLPSDAGSNITYRTINDYGA
                     LTPKMTGVME"
BASE COUNT         2339 a         2581 c         2389 g         2466 t
ORIGIN      
        1 atttacaaag taatactcat tgcgacttct taatttaaga aagcgcaagg aacgtttacc
       61 cttgcgctta tcataatcag tcaggcgtcg actttatcca gcggccatga atcaaacaga
      121 tagccgtcaa aataaatatc gtcaacgttc gagaattcca gcagacgttg cttaacgttt
      181 tccagatgct gccacattgc cagcttcgcc gctcgggcat cttttttgat taacgcggca
      241 aggatctgtt tgtgatcgcc caaccactct ttgcgataca ggctgtcatc cagatggctg
      301 tgcaactgga tccacattgg attgttttcc cgccactgcc aggactgacg gaataactcc
      361 accagcatgc tgttatgcgt tgcttcagca atggcgagat ggaactgcat gtcaccgctt
      421 tcgctgctac ccggcgcgct ggaagccagt tcacgctctt ccagttgcaa tgcctgacgc
      481 attttgacga tatcttcgcg ggtagcctgc agggcggcaa attccgcgat gttgctctca
      541 agaagctgtc gcgcctgcaa caattcaaag gggccggcat cattgcagac gttggcatcc
      601 ggactgtctg tgttgtggct gcctgagcta tcaagaacat agataccggc accccggcgc
      661 acttccacca gccctttgat ctccagcatg atcagcgctt cacgtaccac cgtccgcgtg
      721 acatcaagca tttctgcaat ttcacgctcc ggcggcagcc gttcgccagg attgtacggc
      781 gtctttatga tcagatcgcg gatcatcgcc ccgacttcct ggtaaggtct ttgcgcagag
      841 gtggcagatt tcatggtgtt gtgtccgtta ggtgcggtta atcaaatttt tgccggatgc
      901 ggcgtgaacg ccttatccgg cctacaacgg gcaattttac ggcccccgtt aatctcaaac
      961 tataccatta gcactggaag ttggcacgta caggtgggca aaaaaacgaa aactggtcaa
     1021 ccaaatatca gtttgattga ccagtaagtc tgtagggtaa tcagttagtt acagcgcagc
     1081 cacacactcg cgcgcaccgc gttcgcacag ctgctgatat gccgccgtca ccgcgccaac
     1141 aaagtcggca ttctgcggca gatcatcggc aaaaataccg ctcaggccca gcagcgcttt
     1201 cacgcggtct gcgccctgat actgcgcgtt aatcttctgg aactcggcca gcatcgggtc
     1261 gaccacgtca atggcattac cctgctcatc cacgccctgg gtgtaacgca tccagccagc
     1321 cacgcccagc gccaggtgac gccagctgcc gccgttttgc aggtgcagac gcaccgggtc
     1381 cagcagacgc tgcggtaact tctggctgcc gtccatcgca atctgccagg tacggtgacg
     1441 cagagacggg ttgctgaaac gctcgatcag cagcgtcgca taggccttca ggtccgtacc
     1501 ctccggcata gacagcgttg gcgcttgttc ctgcatcatc agggcaaagg ccgctttgcg
     1561 ataatccggg ttagtcatgg tgtcggcaat agtttcatag ccgccgaggt aaccgaggta
     1621 tgccaggaaa gagtggctgc cgttcagcat acgcagcttc atcatttcga acggcacaac
     1681 gtctgcaacg aactgtgcgc ccactttatc ccagtccggg cgaccattaa cgaagttatc
     1741 ttcaatcacc cactgacgga acggttcgca ggcaatggcg cacgggtcgt aaacacccag
     1801 ctgatcagca atttcctgta aggtttctgg cgtcgccgcc ggaacgatgc ggtcaaccat
     1861 ggtgcacggg aaggtgacgt tctcttcaat ccatgccgcc agctgcgggt cacgtgcctg
     1921 agccagcccc agtaccgcga ccttcgccac atgaccgttt tcacgcacgt tatcgcagga
     1981 catcaccgta aatgctttca gccctttttc acgacgcaga cgcaaggctt cgacgatgta
     2041 accaatcgcg gacttcggcg cagtcgggtt ttctagatcg tgcttgatca gcgggttatt
     2101 gagatccagt tgaccgcttg ccgcatcagc gcagtagcct ttttccgtga ccgttagaga
     2161 gacaatcgcc gtttgcggac gcgccatcgc gttgagaata ccttcgcagc cgtcgatttc
     2221 cggatgcagc gcttctttca tcgaaccgat aattttcagc tcggtgcttt ctgcgccttt
     2281 ttccgctacg gtgtacagca gttgctgttt tttcaggttt tcgatcagca cgcggtcgtt
     2341 gcctggcatc aggttaactt cgcagatgcc ccagtcgctg tcggtgcttt ccagcagatg
     2401 atgggtatac agcgcctgat gtgcgcggtg aaacgccccg caaccgagat gcacaatgcg
     2461 tgattccaga cgagaatgat cccatgacgg gcgggcaacc ggcagattgc tgtcaacaat
     2521 agtagtcatc gtaaactcca gaatccgtct tcagagagtg acggcaagga agaaggaacc
     2581 ggcacggcgc gcagccatgc cggtggatat taacggctaa agaaagcgcg ctggatcgcc
     2641 agttcgacac cgcgaacttc ggccaggcct ttcagacgac caattgcgga gtaacctggg
     2701 ttggttttct tcttcaggtc gtccagcatc tgatgaccgt ggtccggacg catcgggatc
     2761 aggtcttctt tgccttccgc tttacgacgg tgttcttctt caacaatcgc tttcaccact
     2821 tcgtacatat caacgtcact gttcaggtgc gccgcttcgt ggaaggtttt cgggttatct
     2881 tcacgcatgg tggagcgcag atgggtgaag taaatacgcg gaccgaactg cttgatcata
     2941 tcaaccagat cgttgtcagc acgcacgccg taggaaccgg tgcacatggt gaaaccgttc
     3001 gccatgctgt ttacggtatc aaccatccac tgcatatctt caatggtgga aacaatgcgc
     3061 ggcaggccga ggatcgggcg cggcggatcg tccgggtgaa ccgccatacg cacgccaact
     3121 tcttcagcaa ctggaataat cgctttcagg aagacggcaa agttttcgcg cagcttcgct
     3181 ttatcgatat ctttgtacag ctccaggtgc ttacggaact ggtcgagggt atacccttct
     3241 tccgcgcccg gcagaccggc aatgatgtta cgcgtcagac gcgctttgtc ttcatcgctc
     3301 atagtggcga agcgttcagc tgcctgagca atttcttctt cggtgtaatc cgcttccgcg
     3361 cctggacgtt tcaggatatg catttcgaat gcagcgaatt cgatctggtc gaagcgcaga
     3421 gctttggagc cgtctggcag cacgtattcg aggtcagtac gggtccagtc gagcaccggc
     3481 atgaagttgt agcacacggt gcgaatgccg cactgcgcca ggttgcgcag agtctgctga
     3541 tagttagcga tccactgctc atagttgcca gtgtgggttt tgatatcttc gtgaattggt
     3601 acgctttcta cgacagacca caccaggcct gcgtcttcaa cgatcgcctt gcgtttgagg
     3661 atctcttcta cggaccatac ttcgccgttc gggatatggt gcagcgcggt aaccacgcca
     3721 gttgcgcccg cctgacggac atcagctaaa gaaaccagat cgtttgggcc gtaccagcgc
     3781 caggtctgtt ccatgatttt tcctctttca catagtgggt tccacagcaa agagacgcgg
     3841 aaccctggag ttgtttaggt atccggatga acaaccagac cgcagccgtg gcgttgcatc
     3901 ggatgagatg gcgtataagt tctagctttt ggtaagatat gtcaagccga attctgaaat
     3961 tggttaacca aattacaaga atttcactct catggttgtt gctgcaaatt gcagcaaaag
     4021 gtaatcgatg gttattgatc agaggatgtg acattcatcg caacaatggt tgaccaattt
     4081 acataacatg tcgcccaaaa taacaacggt tcaaccaggt aaggtaaaac gttatgcatg
     4141 tgcttaacat tctctgggta gtattcggca ttggtctgat gctggtactg acaacgaccg
     4201 caggttcaga cacattcact gcattagcaa tgcctcttag attattttga cctgtcagta
     4261 aaagacacgt tgaaaacctg gggtctgctg gagctggtca actccgtggt tgggctgatt
     4321 attagcaagg tagcgtaaaa gaacaccaga gcctgccaat ggcaggctct gactgatgac
     4381 aaagtctaaa aatgtgcccg gacagtcccc tcgcccctcc ggggagaggg ttagggtgag
     4441 gggaacagac cagcaaagtg cgctttgttt atgccagatg cgacgctgac gcgtcttatc
     4501 tggcctacaa agggctaacg tgcaggtttt tagcttcagg taatattgcg taactgcatt
     4561 agcaatgccc tgtgatttct ttattgataa acaaaagtca cgccaataat cgattgcaca
     4621 ttccctgcag tcacctgccc tccggtacgt gcgtaatttg ccgttaatcc cagacttacc
     4681 gccgaagttc ctactgctcc taacgatacc gtgttattcg ctggaataat cgtaccgttg
     4741 cgcgtcaact gtacgccgac gccctgtgct ggtgaaaacg acgcgatatt ggtgaaaatc
     4801 gagttgcccg catctgcggt tgtgccggag aggtaatacc ccaggttttg gcttttcgca
     4861 caataaacgg taagaggaat tggcactgaa ccagggtagt ccggcagagt aacggtgaca
     4921 tcacgagcag aaacatcgca gccgccagta ggcaccacca catcattatt ggcgtaaata
     4981 ttccacacaa actggaaatc atcgctgtta tagttgttgg tctgtcgcaa aataagcacg
     5041 gcaattaatg agccagcttt aatcgccacc ccgcccgcac tgctcacagg cgtcaaataa
     5101 agcgccaccg gccacggctt atccgttctc gaattataaa caacccgcgg cgtttcgctg
     5161 gtggtcggaa atggatagct actgccacta tattttacgg tcccggaaaa attagataac
     5221 acgccgccat aagccgagcc tcgttgcagt gtgacatagt ctgtaatggt ttccggataa
     5281 tcgttatggc aaaagatttg cgtcgaaaga tctacgacca ggttttgccc cacattcacg
     5341 acaggcgcaa ggtttacata aacattagcg ctgccaccgc caatagggat agcagtacca
     5401 ttggcggttt tacaggcgaa tgaccaggca tttaccgacc agcccatcag cagtacagca
     5461 aacagggtaa taactcgttt cattacaatt atctcttcgg gttcagctgt aggtataggt
     5521 gatgctaatc actgcctgaa tggttccctg agtggctccg ccatttaccg tcaatgctct
     5581 gacctgtaac gggaagtgcg ctgattgtga ggaatcatcc acctgaactg ttttggttgc
     5641 gccagtattc aatgtgttgc cactgtcatc ctgtagctct aactggatgt tttgcgcggt
     5701 cccctggttt ttataatatc cggtactgtc ggctgccccg ctgaagctgg cagtgaccct
     5761 cgacgttccc accggacaat tagtcaactc aagcgcaaca tcatgccagg ccgatgccgc
     5821 cccggcagac atcagactga aagaataaag atcgccgaga tcaaccgtgg cattggtggt
     5881 ggaaactgtg cacggtttgg cgacgacctt accgttcacc gtgatggtga catcggctgc
     5941 ctgtattgtc gcacttgcga gcgccaatat tgccgccaat aaatacccac gtttgcgcca
     6001 tttcatgagc atctccagtt actgatattc aagagtgaag gtagccgtgg cattgatatg
     6061 ccccgcagtg acaggcacct gtgtcgccat tagccgggcg taaaaattca acgtatttgg
     6121 tttacccggc gtcagggtcg tccacgaaat cgcggacgat agagcattaa ggggtatctg
     6181 attttgctgc tcattcagaa gctgtattcc cagtcccgaa gccgcagaca ccgtattttc
     6241 aagtgcaagc aggttggcat tgtggctatc tgcaacgccg gtaaacccaa cctttacggc
     6301 agaaacggcg ttaccacagg gtgacagcaa aatacgaaat ggaacgacag gagtcgttgc
     6361 accaatgttg ttaaattgct tcgccgcgtt ttccatcaga tcaacagtaa aattggttga
     6421 ttcagcggcc acactacagc cgttatctct gacatagccg cggatagtaa tcgtgctatc
     6481 cgcagccaaa acgcgactta ccgccagcca caaaaaagcg cacagaagat aaaaaggttt
     6541 gtttctcatc acgccccctt aacgacattc agctgatagc tgggttaata actgctgctg
     6601 actctctggt ggcagttgat aattggcgat acagtgagca ttttcctctt ctccccattt
     6661 cacctgaact tttcccgcta aaggcattcc gctgaggtaa acctgaccat tatccgcaac
     6721 aatgccgcta ctctggctac tctctgatgt caccatcgcc ccaaacggca gcggcttatt
     6781 attgtgggtt agcgtcatga gcagttttat cccaacgcgc gctttaaact ctgctcgcac
     6841 gatcgcccca cgagtgggaa caacgttagc gaccgcgtta tctaaatcga cgttatcagc
     6901 cagggtattg gtatccagcg ccactctgtt ttcccgatat tcggtggcat aaggcagcac
     6961 ggcataaccg cgccagtcgg tacgcacccc cgtctggttt tcgacttttg catcttttgc
     7021 gccaggcgct ttaacaagta ccaccgtatc gtttaacggc tgccccagcg ttacgccatt
     7081 ggcatgagcc agtaccccac cgctgactcc gtaatagagc tgcttaatat catcgctatg
     7141 gctgtaaccg atattggcat tgccgtaacc accgcgataa ttcagcgtgg cgtagcctgt
     7201 acttccgcta ttaccatcgc ctcccccggc atagccggtt tgcacgctat agctgaggtt
     7261 gttgtcttcc agcaacgtac cgtatacacc agccagattg gtcatccgac cgttgagatc
     7321 gtgtgacatg ctgtagctgg cactggcatg tcgccactga gatttactgt cagaacgcag
     7381 ccagtggctg aaaggaatat tgacgttaag cgctaacatc tgatcccgtc ctttttgccc
     7441 ggcgtttttc gtcaggctat agctgagcgt ccagttgata tcttcgaacg cagtatttaa
     7501 tccagcctag aattgctcat cgacattact cgttccccaa taagtttgat ggctaccact
     7561 caaatacagt gttgatgtgc gcccgagttg ctgagtaacg gtgagctgta atttcccgcg
     7621 tttgttataa gcgaggttgt aatagtcggt gaatttcggc ttaacctgaa taactccatc
     7681 ctgtgtttcg atgttgtagc cattcattcg actgtatgtt gtatcagcga aattaaaata
     7741 tccgctggtc gaataacggt aacccactaa ctgaatattc gtgcctgact cattgagcga
     7801 tttgttatag agaaaacgca ccgattgtcc gtcatgctga ctgtcatcgg gaagtgtgga
     7861 attagcctgc gtcatatcca cagacagagc gcccagtgcc cccatgtttt tcccgatacc
     7921 gaaattaaaa gcacgataac gatccgccag ttgcgttcca ccatatattg tccagccagc
     7981 cggaaggccg tggagtaatg tactttggaa aaagcggggt ttttcctgct gcgtatttcc
     8041 actacggtat tctcctgccg taatggaata acgagtatgc ccttcacgtt gcaaaagcgg
     8101 gactgacgaa tagggtacgg taaaaatctg cgtgctgccg tcagcctctt tgatcgttac
     8161 ctgcaagtca ccactattac ctgcggcata gatatcgttg atggtaaaag gccccggtgg
     8221 caccgtacta ttataaatgt catacccatt ttgtttaata gtgacctgtg cagtaccacg
     8281 agcaataccg tggatcaccg gggcaaatcc tctttggcta tcgggtaaca tattgtcatc
     8341 tgaggccaat tgtgcgccgc gaaagttaat accatcgaaa atatcgccct gggtataacc
     8401 atcacccagc gtcagccggg aacgtaacgg tattatgtct cgctcaagcc aggtattgat
     8461 atgctgccat ttatttttgc tacctgatga tctgtcgcta ctgttataac tccagctggt
     8521 attgtcgcgt aaacaccacg caccaatatt taacccactc tgtaggttta aatatgcata
     8581 atggctgtta ccccaaatcc gattctgtac actatttccg ctgaaattat aattgagcaa
     8641 tccggcatta ataccgggat cccataactc aggaggaata taaccacgcg cgcgattact
     8701 cataaatgcc tgagggatcg tcaggttcag tcgctgctga ccaacatcca gatgcgcagt
     8761 agcgtcatgg atcattgagg ttaatggcac gcaggcatca tctgccagca gattcatacc
     8821 ggagacagaa gccgcattca gccccatact ggcaagttgc gcgcgtgtca ggcagggaac
     8881 aatcccttgt tcactgtcgc ccgtattaaa tgtgacatca cgcgttgcca tataaccatt
     8941 attcaaatag atatcgacgc gatacgtccc tggcggtaat tcttgcccat tttcaaaacg
     9001 cgataaatcg gccacagcct ggggatcatc cgctaaaaag cgcggattaa aatagagttc
     9061 ggcagatgac aaaggtgcct gtgcggcaaa agcacaggcg acaacgagcc ggacaaaaaa
     9121 ccagccaaac gatgcttacg aatatgcaag cattgtgtgt ttcgctggta aagtcttaaa
     9181 ttcagatatg acattattcc tccggtttaa aattacccgg cagtcaattc tttttattca
     9241 ggcgagaaat tccccctgcg ttattccatt acgcccgtca ttttgggggt aagtgcgcca
     9301 taatcattta ttgttcggta agtaatattg cttcctgcat cagaaggcaa tttaaccgtg
     9361 ctttcgccca ttggaggcac caatgcattt tcaagaaccc gggttccggc attcaactct
     9421 gttaccgtca gataataggg tgtcgggtta atcagcgtca gagaattcgc gctacgacga
     9481 aatcttaatt tttctgcggc ctgatcgggt ggcaacgcta atttagccgg gcgatagtac
     9541 agtttaatgc ggctgataat tgcgagctgt agcgtattct cagtcaattt tgatttatcc
     9601 attgacggaa tcgctttaac attcatccag aataaacttt cccggtcctg tggcaattgg
     9661 ttatttgttg catcaagaat acgcaaggta ttctcttttt ttcccttcat cgcaaacaga
     9721 ggaggcgtca cgataaaacg accatccttt acaccatcgg cattttccat ccatg
//
LOCUS       DADMHC010000151         9653 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.154, whole genome shotgun sequence.
ACCESSION   DADMHC010000151 DADMHC010000000
VERSION     DADMHC010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9653)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9653)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9653
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.154"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            1..591
                     /locus_tag="JNZ57_003058"
                     /pseudo
     CDS             1..591
                     /locus_tag="JNZ57_003058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706235.2"
                     /note="mutations in this gene result in a compromised
                     ability for drug-inducible mexXY expression; expression is
                     inducible by the same ribosome-targeting agents that
                     induce mexXY; frameshifted; incomplete; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="RNA ligase RtcB family protein"
     gene            588..1202
                     /locus_tag="JNZ57_003059"
     CDS             588..1202
                     /locus_tag="JNZ57_003059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000602105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor H"
                     /protein_id="HAY8829188.1"
                     /translation="MILLQLSSAEGPEECCLAVKKALDRLIKEAARQDVAVTVLETET
                     GRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADE
                     QEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLL
                     IAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAFIEG"
     gene            complement(1259..2716)
                     /gene="pepD"
                     /locus_tag="JNZ57_003060"
     CDS             complement(1259..2716)
                     /gene="pepD"
                     /locus_tag="JNZ57_003060"
                     /EC_number="3.4.13.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008783788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosol nonspecific dipeptidase"
                     /protein_id="HAY8829189.1"
                     /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKG
                     FHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDG
                     EWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWL
                     QADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGG
                     EIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDAL
                     KSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN
                     SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA
                     KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIG
                     PTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK"
     gene            2977..3435
                     /gene="gpt"
                     /locus_tag="JNZ57_003061"
     CDS             2977..3435
                     /gene="gpt"
                     /locus_tag="JNZ57_003061"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HAY8829190.1"
                     /translation="MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA
                     LLARELGIRHVDTVCISSYDHDNQRELKVLKCAEGDGEGFIVIDDLVDTGGTAVAIRE
                     MYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR"
     gene            3527..4771
                     /gene="frsA"
                     /locus_tag="JNZ57_003062"
     CDS             3527..4771
                     /gene="frsA"
                     /locus_tag="JNZ57_003062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase FrsA"
                     /protein_id="HAY8829191.1"
                     /translation="MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTI
                     PHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWA
                     TQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEA
                     AQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYF
                     APRGIVMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGA
                     NVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEA
                     LRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFN
                     PVYRNFDKGLQEITGWIEKRLC"
     gene            4829..5230
                     /locus_tag="JNZ57_003063"
     CDS             4829..5230
                     /locus_tag="JNZ57_003063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor-binding protein Crl"
                     /protein_id="HAY8829192.1"
                     /translation="MTLPSGHPKSRLIKKFTALGPYIREGKCEDNRFFFDCLAVCVNV
                     KPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLRE
                     FHEKLRELLTTLNLKLEPADDFRDEPVKLTA"
     gene            complement(5269..6324)
                     /gene="phoE"
                     /locus_tag="JNZ57_003064"
     CDS             complement(5269..6324)
                     /gene="phoE"
                     /locus_tag="JNZ57_003064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoporin PhoE"
                     /protein_id="HAY8829193.1"
                     /translation="MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYM
                     SDNDSKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGL
                     KYKDLGSFDYGRKLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFF
                     GVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQN
                     LQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQF
                     DFGLRPSLGYVLSKGKDIEGIGGEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNK
                     LNINNDDIVAIGMTYQF"
     gene            6612..7715
                     /gene="proB"
                     /locus_tag="JNZ57_003065"
     CDS             6612..7715
                     /gene="proB"
                     /locus_tag="JNZ57_003065"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HAY8829194.1"
                     /translation="MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHR
                     IVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQML
                     LTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILA
                     GADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKL
                     QAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAG
                     EITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDA
                     LRRIAGHHSQEIDAILGYEYGPVAVHRDDMITR"
     gene            7727..8980
                     /gene="proA"
                     /locus_tag="JNZ57_003066"
     CDS             7727..8980
                     /gene="proA"
                     /locus_tag="JNZ57_003066"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HAY8829195.1"
                     /translation="MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILN
                     ANAQDVADARANGLSEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSG
                     LRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQ
                     DALKSCGLPAGAVQAIDNPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVI
                     TGGIGVCHIYVDESVEIAEALKVIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQ
                     MAESGVTLHADAAALAQLQAGPAKVVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIR
                     EHGTQHSDAILTCDMRNAQRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLH
                     ARGPMGLEALTTYKWIGIGDYTIRA"
     gene            9095..9170
                     /locus_tag="JNZ57_003067"
     tRNA            9095..9170
                     /locus_tag="JNZ57_003067"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9128..9130,aa:Thr,seq:cgt)
     gene            complement(9185..>9653)
                     /locus_tag="JNZ57_003068"
     CDS             complement(9185..>9653)
                     /locus_tag="JNZ57_003068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HAY8829196.1"
                     /translation="VAWINPEESKSNRAIGVALNDTACRVLKKQIGNHHRWVFVYKES
                     CTKPDGTKAPTVRKMRYDANTAWKAALRRAGIDDFRFHDLRHTWASWLVQAGVPLSVL
                     QEMGGWESIEMVRRYAHLAPNHLTEHARQIDSILNPSVPNLSQSRNKERTNDV"
BASE COUNT         2331 a         2386 c         2536 g         2400 t
ORIGIN      
        1 gtctatttta cagcggcata ttgcctcgtt ctcgcatcat ggtttgcctc aaggcagtga
       61 cgacgcgcta cggtatattg cggaacatga cgatgcgctg gcgtttgcgt gtattaatcg
      121 ccagatgatc gctttgcgca taatgcaaca agttaaggcc acgggaagtc cggttctgga
      181 tgtggcgcat aactttgtta gcgcgtgtca aatcggcgat caacagggct ggttgcatcg
      241 taaaggtgcc acgccggatg acaacggtct ggtgattact cctggattgt acagcctgtt
      301 gcgaacgaaa aaacgctcca ctcgctggcg catggggcag ggcgtaaatg ggggcgcacc
      361 gagtgtaaat ggcgtctggc agcgaaatac acggtgacgc aactctcgcg gactgaactt
      421 ggcagtcgga taatttgtcg cgataaacaa ctcatctttg aagaagcgcc acaagcctat
      481 aaatcggctg aaagcgtggt gcaatgtctg gtgcaggccg gtttaattat tcctgtcgcg
      541 cggctgcgtc cggtgctaac gctcaaaaac agtggaggga aaaaaggatg atcttgctac
      601 aactctcctc agcggagggg ccggaagaat gttgtctcgc agtgaaaaag gcgctggaca
      661 ggctaattaa agaagctgcc cgacaagacg tcgcggtaac ggtgttggaa acagaaacgg
      721 gccgctactc tgacacgctg cgttcagctc tggtttctct ggatggcgat aacgcatggg
      781 cattaagcga aagctggtgt ggcactattc agtggatttg tccgagtccg tatcggcctc
      841 atcatgggcg caaaaactgg tttctgggca ttgggcgttt taccgctgat gagcaggagc
      901 aatccgatgc gatccggtat gagacgctgc gttcgtcggg gccgggcggt caacatgtca
      961 ataaaaccga ctcggcggta cgcgccacgc atttggcatc cggtattagc gtgaaggttc
     1021 agtcagagcg tagtcagcat gctaacaagc ggctggcacg attgctgatt gcctggaagc
     1081 tggagcagca gcaacaggaa aatagcgcgg tgctgaaatc gcagcggcga atgttccatc
     1141 accagattga acgtggcaac ccgagacgga catttacagg gatggctttt atcgaaggat
     1201 aatgaaggat gaaactgccg gaaggcgatt aaacgccatc cggcagcaaa tcaaataatt
     1261 acttcgccgg aatttctttc agcagttcag tcagcagtgt ccagtaatga cctacgcttt
     1321 cgatgtgaac ttgctcatcc ggagagtgtg gaccggtgat agttggcccg atagaaacca
     1381 tgtccatttc cggatacggt tttttgaaca gaccacattc caggcccgcg tggataatct
     1441 ggatgttcgg cgtcttgttg aacaggcgct gataggtttc acgtaccaga tgcatcaccg
     1501 gagaattagc gtccggctgc cagccaggat atgcgccttt cgcttcggtt ttcgcgccag
     1561 ccagtttacc cagcgaatcc agcatgctca ccacgtagtc tttaccgctg tcgatcagtg
     1621 aacggatcag gcagtgaatt tctacgttat tgtcagtcat ggtcaccaca ccgacgttca
     1681 gggaggtttc aaccacacct ttggctacat cggagttgcg gatcacaccg ttcggggtgg
     1741 cgttcagcag acgaataaag gtatcgcgag atttcgcaat cagggcagct ttatcgttcg
     1801 ctacagagtc cagcaacaag gccagatttt tctctttctc tgccagctcg tttttcagga
     1861 tctcctgata ggtattcacc agagatttca gtgcgtcgac tttatcagct gcgacagcaa
     1921 tggtcgcaaa ggcttcacgc gggatggcgt tacgcagtgt gccgccgttg aaatcgataa
     1981 ggcgcaggtc cagttcttct gcatgacccg ccaggaagcg caccagcagt ttgttggcat
     2041 tacccaggcc aacgtggatt tcaccgccgg agtgaccgcc tttcagacct tttaaggtta
     2101 acttgaaggt ttcaaaacca gctggaaccg cttcacgatc taaatgcagg ttggaggtga
     2161 agtcgatacc ccccgcacaa cccatgtaga tttcaccttc ttcttcggag tcggtgttaa
     2221 tcagaatatc agcctgcaac cagttgctct gtaagccaaa agcaccgtcc ataccggctt
     2281 cttcggtcat ggtcagcagc acttccagcg gaccgtgaac cacgttttcg tcagccagaa
     2341 ccgccagtgc agaggccata ccaatgccgt tatccgcacc cagcgtggtg ccgcgcgctt
     2401 taacccattc gccatcaata taaggctgga taggatcttt cgtgaagtca tgcacggtgt
     2461 cgttattttt ctgcggcacc atatcgaggt gggcctgtaa gacgaccggt ttacgatttt
     2521 ccatacctgc ggtagcaggt ttacgaatca ggatattacc tacctgatcg cgttcgacat
     2581 ggaaaccttt ctcttttgcc caaccaacaa tgtattcagc gagttgctct tcatgatagg
     2641 acgggtgagg aatagaacag attttggcaa aaatatccca cagcggctgt ggagataatt
     2701 gagacagttc agacacgtta agtctccttg tcgatcaccc gcaaaacagt attgcaggtc
     2761 acagggttag cagaaaatgt tgtcaacaca agacaggctt gcgagatatg tttgagaata
     2821 ccactttatc ccgcgtcagg gagaggcagt gcgtaaaaag acgcggactc atgtgaaata
     2881 ctggttttta gtgcgccaga tctctataat ctcgcgcaac ctattttccc ctcgaacact
     2941 ttttaagccg tagataaaca ggctgggaca cttcacatga gcgaaaaata catcgtcacc
     3001 tgggacatgt tgcagatcca tgcacgtaaa ctcgcaagcc gactgatgcc ttctgaacaa
     3061 tggaaaggca ttattgccgt aagccgtggc ggtctggtac cgggtgcgtt actggcgcgt
     3121 gaactgggta ttcgtcatgt cgataccgtt tgtatttcca gctacgatca cgacaaccag
     3181 cgagagctta aagtgctgaa atgcgcagaa ggcgatggcg aaggcttcat agttattgat
     3241 gacctggtgg ataccggtgg tactgctgtt gcgattcgtg aaatgtatcc aaaagcgcac
     3301 tttgtcacca tcttcgcaaa accggctggt cgtccgctgg ttgatgacta tgttgttgat
     3361 attccgcaag atacctggat cgaacagccg tgggatatgg gcgtcgtatt cgtcccgcca
     3421 atctccggtc gctaatcttt tcaacgcctg gcactgccgg gcgttgttct ttttaacttc
     3481 aggcaggtta caatagtttc cagtaagtat tctggaggct gcatccatga cacaggcaaa
     3541 cctgagcgaa accctgttca aaccccgctt taaacatcct gaaacctcga cgctagtccg
     3601 ccgctttaat cacggcgcac aaccgcctgt gcagtcggct cttgatggta aaaccatccc
     3661 tcactggtat cgcatgatta accgtctgat gtggatctgg cgcggtattg acccacgtga
     3721 aatcctcgac gtccaggcac gtattgtgat gagcgatgct gaacgtaccg acgatgattt
     3781 atacgatact gtgattggct accgtggtgg caactggatt tatgagtggg ccacccaggc
     3841 gatggtgtgg caacaaaaag cctgtgcgga agaagatccg caactcagtg gtcgacactg
     3901 gctgcatgcg gctacgttgt acaacattgc cgcctatcct catctgaaag gagatgacct
     3961 ggccgagcaa gcgcaggctt tatcaaaccg cgcctatgaa gaggccgccc agcgtctgcc
     4021 gggcacgatg cggcagatgg agtttaccgt acccggcggt gcgcccatca ccggcttttt
     4081 gcatatgccg aaaggcgatg gcccgttccc gacagtatta atgtgtggtg gtctggatgc
     4141 gatgcagacg gactattaca gcctgtatga acgttatttt gcgccgcgcg gcattgtgat
     4201 gctgactatt gatatgccgt cggtgggctt ttcttcaaaa tggaagctca cccaggactc
     4261 cagcctgttg catcagcacg tcttaaaggc gctgcctaac gtaccgtggg tggatcacac
     4321 tcgcgtcgcg gcctttggtt tccgtttcgg cgctaacgtt gccgtgcgtc tggcatatct
     4381 tgaatcgccg cgtctgaaag cggttgcctg tcttggtccg gtagttcata ccctgttgag
     4441 tgattttaag tgccagcaac aggtgccgga aatgtatctt gacgttctgg cgagtcgttt
     4501 ggggatgcat gatgcttccg acgaagcgtt acgcgtggag ctgaatcgct attcattaaa
     4561 agtgcaagga ttgctgggac gtcgctgccc aacgccaatg ttatcaggct actggaagaa
     4621 cgatccgttc agcccggaag aggactcacg cttaatcacc tcatcatctg ctgacggtaa
     4681 attattagag atcccattta acccggtgta tcggaatttt gacaaaggtc ttcaggaaat
     4741 caccggctgg atcgaaaaac gcttgtgtta aaaatttgct aaattttgcc aatttggtaa
     4801 aacagttgca tcacaacagg agatagcaat gacgttaccg agtggacacc cgaagagcag
     4861 attgatcaaa aaatttaccg cactaggccc gtatattcgt gaaggtaagt gcgaagataa
     4921 tcgattcttt ttcgattgtc tggctgtatg cgtcaacgtg aaaccggcac cggaagtgcg
     4981 tgaattctgg ggctggtgga tggagctgga agcgcaggaa tcccgtttta cctacagcta
     5041 ccagtttggt ctgttcgata aagcaggcga ctggaagagt gttcctgtaa aagatactga
     5101 agtggttgaa cgactggagc acaccctgcg tgagtttcac gagaagctgc gtgaactgct
     5161 gacgacgctg aatctgaagc tggaaccggc ggatgatttt cgtgacgagc cggtgaagtt
     5221 aacggcgtga gtgaaatgtg ccggatgcat cacatccggc aatatctatt aaaactgata
     5281 cgtcatccca atcgcgacaa tatcatcatt attaatattc aatttgttat cgctatccag
     5341 ttggttgatt ttataatcaa caaatgctga catatttttg ttgaaataat acgtagcacc
     5401 gacgtcgata taattaacca gatcttcacc accgatgccc tcaatatctt tccctttcga
     5461 taagacataa cccagcgatg gacgcagacc aaagtcaaac tggtattgag cgaccgcttc
     5521 aaagttctgt gtcttattgg caaagccgcc agttattggc gtcattttgc gagtttcaga
     5581 atagaaagtt gccagataaa tattattggc atcgtatttc agacctgttg cccatgcttc
     5641 tgcacgcttg cctgtgccac ggctttgcag gttctgctcg ttggtgcgat ctgagttggt
     5701 ataggcccca ctaatggcga aatcgctgcc gccaaagtca tatgtcaatg acgtgccgaa
     5761 gccatcgccg ttttgctttt taacgtcgcg gttttcgttt ttcccttgat attgcagggt
     5821 taagttcagg ccatcgataa cgccgaagaa gtcggtgttc cgatacgtcg ccagaccgct
     5881 ggcgcgtttg gtcataaagt tgtcggtctg cgccgaggag tcgccaccaa attccgggaa
     5941 catatcggtc caggcttcca cgtcatacaa cgcgcccagc ttacgaccat aatcgaaaga
     6001 acccaaatct ttatatttca acccggcaaa agcgagacgc gttttttgct gtgcagtatc
     6061 actctctgct ttattaccgg caaactctgc ttcccaacga ccataaccag tcagttgatc
     6121 gttaatttgt gtttcgcctt taaaaccaaa acggatataa ctctggtcgc catctttact
     6181 gtcgttatca ctcatataat gcatggcttt aactttgcca tagacatcca gtttattacc
     6241 gtctttgtta tatatttctg cggcctgtac ggatgcagat gccacaatgc ccatcaccac
     6301 taatgccaga gtgctctttt tcattttcat tcctgatttt aattaacgcg cgaatattca
     6361 gcgggagagc cccgttgaaa acaggaaagt ttttaacctg agattgttaa agatatatta
     6421 cagattaata atattcttaa aatgtggtaa tttattaaat ctgtaataaa agcgtaaaca
     6481 actgccgcta ggcttgctga tcccgcgcaa caaaacgcca tgctttgctc gcagatggtt
     6541 ggcaaccgac gacagtcctg ctaaaacgtt cgtttgatat catttttcct aaaattgaat
     6601 ggcagagaat catgagtgac agccagacgc tggtggtaaa actcggcacc agtgtgctaa
     6661 caggcggatc gcgccgtctg aaccgtgccc atatcgttga acttgttcgc cagtgcgcgc
     6721 agttacatgc cgccgggcat cggattgtta ttgtgacgtc gggcgcgatc gccgccggac
     6781 gtgagcacct gggttacccg gaactgccag cgactatcgc ctcgaaacaa ctgctggcag
     6841 cggtagggca gagtcgactg attcaactgt gggaacagct gttttcgatt tatggcattc
     6901 acgtcgggca aatgctgctg acccgtgctg atatggaaga ccgtgaacgc ttcctgaacg
     6961 cccgcgacac cctgcgtgcg ttgctcgata acaatatcgt tccggtaatc aatgagaacg
     7021 atgctgtcgc tacggcagag attaaagtcg gcgataacga taacctttct gcgctggcgg
     7081 cgattctggc gggtgccgat aaactgttgc tgctgaccga tcaaaaaggt ttgtataccg
     7141 ctgacccgcg cagcaatccg caggcagaac tgattaaaga tgtttacggc attgatgacg
     7201 cactgcgcgc gattgccggt gacagcgttt caggcctcgg aactggcggc atgagtacca
     7261 aattgcaggc cgctgacgtg gcttgccgtg cgggtatcga caccattatt gccgcgggca
     7321 gcaagccggg cgttattggt gatgtgatgg aaggcatttc cgtcggtacg ctgttccatg
     7381 cccaggcgac tccgcttgaa aaccgtaaac gctggatttt cggtgcgccg ccggcgggtg
     7441 aaatcacggt agatgaaggg gcaactgccg ccattctgga acgcggcagc tccctgttgc
     7501 cgaaaggcat taaaagcgtg actggcaatt tctcgcgtgg tgaagtcatc cgcatttgca
     7561 acctcgaagg tcgcgatatc gcccacggtg tcagtcgtta caacagcgat gcattacgcc
     7621 gtattgccgg acaccactcg caagaaattg atgcaatact gggatatgaa tacggcccgg
     7681 ttgccgttca ccgtgatgac atgattaccc gttaaggagc tggccgatgc tggaacaaat
     7741 gggcattgcc gcgaagcaag cctcgtataa attagcgcaa ctctccagcc gcgaaaaaaa
     7801 tcgcgtgctg gaaaaaatcg ccgatgaact ggaagcacaa agcgaaatca tcctcaacgc
     7861 taacgcccag gatgttgctg acgcgcgagc caatggcctt agcgaagcga tgcttgaccg
     7921 tctggcactg acgcccgcac ggctgaaagg cattgccgac gatgtacgtc aggtgtgcaa
     7981 cctcgccgat ccggtggggc aggtaatcga tggcggcgta ctggacagcg gcctgcgtct
     8041 tgagcgtcgt cgcgtaccgc tgggggttat tggcgtgatt tatgaagcgc gcccgaacgt
     8101 gacggttgat gtcgcttcgc tgtgcctgaa aaccggtaat gcggtgatcc tgcgcggtgg
     8161 caaagaaacg tgtcgcacta acgctgcaac ggtggcggtg attcaggacg ccctgaaatc
     8221 ctgcggctta ccggcgggtg ccgtgcaggc gattgataat cctgaccgtg cgctggtcag
     8281 tgaaatgctg cgtatggata aatacatcga catgctgatc ccgcgtggtg gcgctggttt
     8341 gcataaactg tgccgtgaac agtcgacaat cccggtgatc acaggtggta taggcgtatg
     8401 ccatatttac gttgatgaaa gtgtagagat cgctgaagca ttaaaagtga tcgtcaacgc
     8461 gaaaactcag cgtccgagca catgtaatac ggttgaaacg ttgctggtga ataaaaacat
     8521 cgccgatagc ttcctgcccg cattaagcaa acaaatggcg gaaagcggcg tgacattaca
     8581 cgcagatgca gctgcactgg cgcagttgca ggcaggccct gcgaaggtgg ttgctgttaa
     8641 agccgaagag tatgacgatg agtttctgtc attagatttg aacgtcaaaa tcgtcagcga
     8701 tcttgacgat gccatcgccc atattcgtga acacggcaca caacactccg atgcgatcct
     8761 gacctgcgat atgcgcaacg cccagcgttt tgttaacgaa gtggattcgt ccgctgttta
     8821 cgttaacgcc tctacgcgtt ttaccgacgg cggccagttt ggtctgggtg cggaagtggc
     8881 ggtaagcaca caaaaactcc acgcgcgtgg cccaatgggg ctggaagcac tgaccactta
     8941 caagtggatc ggcattggtg attacaccat tcgtgcgtaa ataaaaccgg gtgatgcaaa
     9001 agtagccatt tgattcacaa ggccattgac gcatcgcccg gttagtttta accttgtcca
     9061 ccgtgattca cgttcgtgaa catgtccttt cagggccgat atagctcagt tggtagagca
     9121 gcgcattcgt aatgcgaagg tcgtaggttc gactcctatt atcggcacca tttaaatcaa
     9181 taagttacac atcattagta cgttccttat ttcttgactg ggacaaattt gggaccgatg
     9241 ggttcagaat cgagtctatt tgccgtgcgt gttcggtaag gtgattaggt gcgaggtgag
     9301 catatcgacg aaccatttcg atagactccc agcctcccat ttcctgtaac actgataacg
     9361 ggactccggc ctgaaccagc caacttgccc aggtgtgtct caagtcgtga aatctgaaat
     9421 catcaatacc tgctcgtctc agcgccgctt tccaggctgt gtttgcgtca taccgcatct
     9481 tcctgactgt tggcgctttc gttccgtctg gtttggtaca gctttcctta tacacaaata
     9541 cccaacggtg atgattcccg atttgttttt tcaatacgcg acatgcagta tcattcagcg
     9601 caacgccaat tgcgcggttt gatttactct cttccgggtt tatccatgcc acc
//
LOCUS       DADMHC010000152         9608 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.155, whole genome shotgun sequence.
ACCESSION   DADMHC010000152 DADMHC010000000
VERSION     DADMHC010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9608)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9608)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9608
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.155"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            121..987
                     /gene="folD"
                     /locus_tag="JNZ57_003069"
     CDS             121..987
                     /gene="folD"
                     /locus_tag="JNZ57_003069"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HAY8829197.1"
                     /translation="MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSN
                     PASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDALNADNTIDGILVQLPLP
                     AGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGL
                     NAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPG
                     DWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTL
                     QACVEYHDPQGE"
     gene            989..1201
                     /gene="ybcJ"
                     /locus_tag="JNZ57_003070"
     CDS             989..1201
                     /gene="ybcJ"
                     /locus_tag="JNZ57_003070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308617.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein YbcJ"
                     /protein_id="HAY8829198.1"
                     /translation="MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGA
                     VETRKRCKIVAGQTVSFAGHSVQVVA"
     gene            1309..1830
                     /locus_tag="JNZ57_003071"
     CDS             1309..1830
                     /locus_tag="JNZ57_003071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HAY8829199.1"
                     /translation="MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLS
                     FKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSL
                     LDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLP
                     GMVLMGMLWWRRR"
     gene            complement(1866..3251)
                     /gene="cysS"
                     /locus_tag="JNZ57_003072"
     CDS             complement(1866..3251)
                     /gene="cysS"
                     /locus_tag="JNZ57_003072"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HAY8829200.1"
                     /translation="MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTF
                     VAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDA
                     LNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDL
                     DQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLG
                     NHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFT
                     VRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQTRAALERLYTALRGTDKTVAPAG
                     GEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLG
                     LLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLE
                     DGPQGTTWRRK"
     gene            3425..3919
                     /gene="ppiB"
                     /locus_tag="JNZ57_003073"
     CDS             3425..3919
                     /gene="ppiB"
                     /locus_tag="JNZ57_003073"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017465360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase B"
                     /protein_id="HAY8829201.1"
                     /translation="MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRV
                     INGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINV
                     VDNDFLNFSGESLQGWGYCVFAEVVEGMDVVDKIKGVATGRSGMHQDVPKEDVIIESV
                     TVSE"
     gene            3922..4644
                     /gene="lpxH"
                     /locus_tag="JNZ57_003074"
     CDS             3922..4644
                     /gene="lpxH"
                     /locus_tag="JNZ57_003074"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HAY8829202.1"
                     /translation="MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFE
                     AWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKV
                     LELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQMLFLALPLFVRKRIAARMRANS
                     KEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGA
                     WHTEGSMVKVTADDVELIHFPF"
     gene            4762..5271
                     /gene="purE"
                     /locus_tag="JNZ57_003075"
     CDS             4762..5271
                     /gene="purE"
                     /locus_tag="JNZ57_003075"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HAY8829203.1"
                     /translation="MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSA
                     HRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVD
                     SLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVL
                     ENPDPRGAA"
     gene            5268..6335
                     /gene="purK"
                     /locus_tag="JNZ57_003076"
     CDS             5268..6335
                     /gene="purK"
                     /locus_tag="JNZ57_003076"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706400.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HAY8829204.1"
                     /translation="MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQS
                     VITAEIERWPETVLTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAD
                     RSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRANETEQLPAECYGECIVEQGINFSG
                     EVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELG
                     YVGVMTMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITALPLPQPVV
                     NNPSVMINLIGSDANYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEA
                     LIPLLPPEYASGVIWAQSKFS"
     gene            complement(6472..7365)
                     /locus_tag="JNZ57_003077"
                     /pseudo
     CDS             complement(6472..7365)
                     /locus_tag="JNZ57_003077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706399.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
     gene            complement(7362..8177)
                     /locus_tag="JNZ57_003078"
     CDS             complement(7362..8177)
                     /locus_tag="JNZ57_003078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2877 domain-containing protein"
                     /protein_id="HAY8829205.1"
                     /translation="MTIIHPLLASSSAPNYRQSWRLAGVWRRAINLMTESGELLTLHR
                     QGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPP
                     SHPQPLAAAWMQRAEETGLFGPLAMAASDPLTAELRQFRHCFQAALNGVKTDWLHWLG
                     KGPGLTPSHDDTLSGMLLAAWYYGALDARAGRPFFACSDNLQLVTTAVSVSYLRYAAQ
                     GYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQEKP"
     gene            complement(8188..9447)
                     /locus_tag="JNZ57_003079"
     CDS             complement(8188..9447)
                     /locus_tag="JNZ57_003079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009029994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1116 domain-containing protein"
                     /protein_id="HAY8829206.1"
                     /translation="MFTSVAQANAAVIEQIRRARPHWLDVQPAFSLISELNEGKTLLH
                     AGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAMLDQGEVNFIPCHHVNAVGPMG
                     GITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLS
                     AALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRTLAPQIARLDHDKQHIAEV
                     IDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFT
                     APVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAAR
                     AVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQ
                     IGAGTVRAPLACFEQALEALAESMGIG"
     gene            complement(9457..>9608)
                     /locus_tag="JNZ57_003080"
     CDS             complement(9457..>9608)
                     /locus_tag="JNZ57_003080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="protein fdrA domain protein"
                     /protein_id="HAY8829207.1"
                     /translation="LLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARL
                     LERLQ"
BASE COUNT         2114 a         2731 c         2562 g         2201 t
ORIGIN      
        1 aaccttcgca agaggtcgct tcacgcgata aatctgaaac gaaacctgac agcgcgcccc
       61 gcttctgaca aaataggcgc atccccttcg acctacgtaa cagatggaat cctctctctg
      121 atggcagcaa agattattga cggtaaaacg attgcgcagc aggtgcgctc tgaagttgct
      181 caaaaagttc aggcgcgtat tgcagccgga ctgcgggcac caggactggc cgttgtgctg
      241 gtgggtagta accctgcatc gcaaatttat gtcgcaagca aacgcaaggc ttgtgaagaa
      301 gtcgggttcg tctcccgctc ttatgacctc ccggaaacca ccagcgaagc ggagctgttg
      361 gagcttatcg atgcgctgaa tgccgacaac accatcgatg gcattctggt tcaactgccg
      421 ttaccggcgg gtattgataa cgtcaaagtg ctggaacgta ttcatccgga caaagacgtg
      481 gacggtttcc atccttataa cgtcggtcgt ctgtgccagc gcgcgccgcg tctgcgtccc
      541 tgcaccccgc gcggtatcgt cacgctgctt gagcgttaca acattgatac cttcggcctc
      601 aacgccgtgg tgattggcgc atcgaatatc gtcggtcgtc caatgagcat ggaactgttg
      661 ctcgcaggtt gcaccactac cgtgactcac cgtttcacta aaaatctgcg tcaccacgta
      721 gaaaatgccg atctgttgat cgttgccgtc ggcaagccgg gctttattcc tggtgactgg
      781 atcaaagaag gcgcaattgt gattgatgtc ggcatcaacc gtctggaaaa tggcaaagtt
      841 gtgggcgacg tcgtgtttga agacgcggct aaacgcgcct catacattac gcctgttccg
      901 ggcggcgttg gcccgatgac ggttgccacg ctgattgaaa acacgcttca ggcgtgcgtt
      961 gaatatcatg atccacaggg tgagtaacat ggcgacattt tctttaggta aacacccgca
     1021 cgttgagctg tgcgatttgc tgaaactgga aggctggagc gaaagcggcg cgcaggcgaa
     1081 aatcgcgatt gccgaaggcc aggtgaaagt cgacggtgcg gttgaaacgc gcaaacgctg
     1141 caaaatcgtc gccggtcaga cagtgagttt tgcaggtcac agcgtacagg ttgttgcctg
     1201 atccctttcc cggcctgtat caacaggccg gttctctttt cagacttttg ccctctacgc
     1261 cccgttcatc catgctgata gcatcgacat tttgccgaag cgaccatcat gccaaccgtt
     1321 attacgcacg ccgccgttcc cctatgcatt ggtttagggt tgggttcgaa agtcatccct
     1381 ccgcgtctgt tatttgccgg aatcatcctg gcgatgctgc ccgacgccga cgtattgtcg
     1441 tttaaatttg gcgttgctta cggcaatgtt tttggtcatc gcgggtttac ccattcgctg
     1501 gtgtttgcgt ttgttgtccc gctgttatgt gtgctgattg gacgccgatg gttcagggct
     1561 gggctgattc gctgctggct gtttttaacc gtctcgttgc tatcgcacag cttgctggat
     1621 tcggtaacca ctggcggtaa gggcgttggc tggctgtggc cgtggtcaga tgaacgcttt
     1681 ttcgctccct ggcaggtgat taaagtcgcg ccgtttgcat tgtctcgtta caccacgccg
     1741 tacgggcatc aggtgataat ttctgaattg atgtgggtgt ggttgccggg gatggtgctt
     1801 atgggaatgt tgtggtggcg caggcgataa ccggatgcga aaactcgcat ccggcaacag
     1861 cgcaattact tacgacgcca ggtggtccct tgcgggccat cttccagcac gatccccatc
     1921 tcgttaagac ggtcacgcgc cgcatctgcc gccgcccagt ctttcgcttt acgggcatcc
     1981 agacgctgtt gaattaacgc ttcaatctca gccacttcgc tgtcgtctgc ctgcgcgccg
     2041 ctttgcagga acgcttccgg ttcttgctcc agcaggccca atacagcgga aagtttacgc
     2101 aggtgagatg ccattgcatt cgccgctgcc atatcttctg ctttcagacg gtttacttca
     2161 cgcgccatat caaacagtac ggaataggct tccggggtgt tgaaatcgtc gtccatcgct
     2221 tcaataaagc gcgcttcaaa cgcttcgcca ccggcaggcg caacggtttt atctgtgccg
     2281 cgcagcgcag tgtagagacg ctccagcgcc gcacgcgtct gcttcaggtt ctcttcgctg
     2341 tagttcaact ggctgcgata gtggcccgac atcaggaagt aacgcacggt ttccgcgtcg
     2401 tagtatttca gcacatcgcg cacggtaaag aagttaccca gcgatttgga catcttctcg
     2461 cggtcaacca tcaccattcc ggagtgcatc cagtagttca catactgacc atcatgggca
     2521 caggtggact gcgcgatttc gttctcgtgg tgcgggaaca tcaggtctga accgccgccg
     2581 tggatatcaa agtggttacc cagctgcttg cagttcatgg ccgaacattc aatgtgccag
     2641 ccaggacgac ccgcgcccca cggagacggc cagctcggtt cgccctcttt cgacatcttc
     2701 cacagaacga agtccatcgg gttgcgtttg tcatcaacca cgtcaacgcg cgcgccagcc
     2761 tgcagctggt cgagatcctg acgcgacagc acgccataag tcggatcggt cgggacgtcg
     2821 aacatcacgt cgccgttgtc agccacataa gcgtgacctt tggcgatcag ttgttcagtg
     2881 agttcaataa tttctgcgat atggtgcgtc gcgcgcggct ccatatccgg gcgcagaatg
     2941 ttcaaagcat caaaatcttt gtgcatttcg gcgatcatgc gatccaccag cgccacaaag
     3001 ctttcgccat tttcattggc gcgtttgatg attttgtcgt cgatatcggt aatgttgcgc
     3061 acatacttca gcttatagcc gaggaaacgc agatagcgcg caaccacgtc aaaagcaaca
     3121 aaggtacgcc cgtgaccgat atgacagaga tcgtaaacgg tgattccaca cacgtacatg
     3181 ccgacttccc cggcgtgaat aggcttaaat tcctcttttt ggcgtgtcag agtattgaag
     3241 atttttagca tcgaagattc cgtttagaca tgtgtgggta attgagttgc gtataatacc
     3301 catatttccc gcgcgaatca gcatacattg cgtgatgatc cgatcgtgcg gttatgctat
     3361 aacaccaccc tatatatgac ccgaaccggg ttgaagcacc aatcaaacgg aacaggatgc
     3421 aaaaatggtt actttccaca ccaatcacgg cgatattgtc atcaaaactt ttgacgataa
     3481 agcacctgaa acagttaaaa acttcctgga ctactgccgc gaaggttttt acaacaacac
     3541 cattttccac cgtgttatca acggctttat gattcagggc ggcggttttg aaccgggcat
     3601 gaaacaaaaa gccaccaaag aaccgatcaa aaacgaagcc aacaacggtc tgaaaaatac
     3661 ccgtggtacg ctggcaatgg cccgtactca ggctccgcac tctgcaactg cacagttctt
     3721 catcaacgtg gttgataacg acttcctgaa cttctctggc gaaagcctgc aaggttgggg
     3781 ctactgcgtg tttgctgaag tggttgaagg catggacgtg gtagacaaaa tcaaaggtgt
     3841 tgcaaccggt cgtagcggta tgcaccagga cgtgccaaaa gaagacgtta tcattgaaag
     3901 cgtgaccgtt agcgagtaat cgtggcgaca ctctttattg cagatcttca tctctgcgtg
     3961 gaagaaccgg cgatcaccgc cggttttctg cgttttttag cgggggaagc tcgcaaggcc
     4021 gacgcgctgt atattcttgg cgatctgttt gaagcgtgga ttggcgacga cgatcccaat
     4081 ccactccatc gccagatggc ggcagcgatc aaagcggtgt ccgattccgg cgttccctgt
     4141 tatttcattc atggcaaccg tgattttctg ctcggcaaac gctttgcccg tgaaagtggc
     4201 atgacgttat tgccggaaga aaaggtgctc gaactttatg gccgccgggt gttgattatg
     4261 catggcgaca cgctgtgcac cgatgacgcg ggttatcagg cttttcgcgc caaagtccac
     4321 aaaccctggc tgcaaatgct attcctcgcc ctgccgttgt ttgtgcgcaa acgcattgcc
     4381 gcgcgaatgc gcgcgaacag caaagaagcc aacagcagta aatcgctggc gatcatggac
     4441 gttaaccaaa acgcagtggt cagtgcgatg gaaaaacatc aggtgcaatg gctgatccac
     4501 gggcataccc atcgcccggc ggtgcatgaa cttatcgcca accagcaacc tgcttttcgc
     4561 gtggtactgg gtgcctggca tacggaaggt tcgatggtga aagtcacggc ggatgacgtt
     4621 gagctgattc attttccgtt ttaaaaaaac cacaactttg ctgatttcac agccacgcaa
     4681 ccgttttcct tgctctcttt ccgtgctatt ctctgtgccc tctaaagccg agagttgtgc
     4741 accacaggag ttttaagacg catgtcttcc cgcaataatc cggcgcgtgt cgccatcgtg
     4801 atggggtcca aaagcgactg ggctaccatg cagttcgccg ccgaaatctt cgaaatcctg
     4861 aatgtcccgc accacgttga agtggtttct gctcaccgca cccccgataa actgttcagc
     4921 ttcgccgaaa gcgccgaaga gaacggttat caggtgatta ttgcgggcgc aggtggcgca
     4981 gcgcacctgc caggcatgat tgccgccaaa acgctggtgc cggtgctggg cgtgccagta
     5041 cagagcgccg cactgagcgg tgtcgatagc ctctactcca tcgtacaaat gccgcgcggc
     5101 attccggtgg gtacgctggc gattggtaaa gctggcgcgg caaacgcggc attactggca
     5161 gcacaaattc tcgcgactca cgataaagag ctacaccagc gtctgaatga ctggcgcaaa
     5221 gcccagaccg acgaagtgct ggaaaacccg gacccgcgag gtgcggcatg aaacaggttt
     5281 gcgtcctcgg taacgggcag ttaggccgta tgctgcgtca ggcaggcgaa ccgttaggca
     5341 ttgctgtctg gccggtcggg ctggacgctg aaccggcggc ggtgcctttt caacaaagcg
     5401 tgattaccgc tgagatcgaa cgctggccgg aaaccgtatt aacccgcgag ctggcgcgtc
     5461 atccggcctt tgtgaaccgc gatgtgttcc cgattattgc tgaccgtctg actcagaagc
     5521 agcttttcga taagctccac ctgccgaccg cgccgtggca gttacttgcc gatcgcagcg
     5581 agtggcctgc ggtgtttgat cgtttaggtg aactggcgat tgttaagcgt cgcactggtg
     5641 gctatgacgg tcgcggtcaa tggcgtttac gcgccaatga aaccgaacag ttaccggcag
     5701 agtgttacgg cgaatgtatt gtcgagcagg gcattaactt ctctggtgaa gtgtcgctgg
     5761 ttggcgcgcg cggctttgat ggcagcaccg tgttttatcc gctgacgcat aacctgcatc
     5821 aggacggtat tttgcgcacc agcgtcgctt ttccgcaggc caacgcacag cagcaggcgc
     5881 aagccgaaga gatgctgtcg gcgattatgc aggagctggg ctatgtgggc gtgatgacga
     5941 tggagtgttt tgtcaccccg caaggtctgc tgatcaacga actggctccg cgtgtgcata
     6001 acagcggtca ctggacacaa aacggtgcca gcatcagcca gtttgagctg catctgcggg
     6061 cgattaccgc tctgccgtta ccgcaaccag tagtgaataa tccgtcggtg atgatcaatc
     6121 tgattggtag cgatgcgaat tatgactggc tgaaattgcc gctggtgcat ctgcactggt
     6181 acgacaaaga agtccgtccg gggcgtaaag tggggcatct gaatttgacc gacagcgaca
     6241 catcgcgtct gactgcgacg ctggaagcct taatcccgct gctgccgcca gagtatgcca
     6301 gcggcgtgat ttgggcgcag agtaagttca gttaagcagg tgctcatttg attgccggat
     6361 gcggcgtaaa cgccttatcc ggcttaccgc tccggtaccc attgtaggcc tgataagacg
     6421 cgtcaagcgt cgcatcaggc atggtgcacc gattgccgga tgctctcatc actacagcga
     6481 aatacaggtc cccgcttcgc ccgccagcgt ctcttcaatt cgcgataacg ccccaatcca
     6541 cgcgggttta ctacggcttc tgacataacc actcaccgcc gttaccttcg gccccatcga
     6601 accatcggct ttggcaaatg gcgctaactc atccggtgtg gcatggcgaa tggcacgttg
     6661 ctgcggcgtt cctcagtttt catataccgc atcagcatcg gtgaggatca ccagtccatc
     6721 ggcattaatc tgctcggcga gcaacgtagt ggcgagatct ttatcaatca ccgcttcact
     6781 ccctgcccca tcttccgtca caggcacacc gccgccgcca ctgcaaatca ccacatgccc
     6841 ctctttgagc aacaactcga tggcttcgct gtcgagaatt ttacgcggtt gcggagacgc
     6901 caccacccgg cgcaaatatt taccatcacg tttcatctgc cagccgtaag ccgcttccag
     6961 tgcctcttgt tcttctggct gataaaccgg accaataaat ttctctggct gcaaaaacgc
     7021 cggatcatca ggcgaaacct caatgcgcgt cagcaccgtc gtaacaggcg gtatctgcgg
     7081 ctgtgcgctc aagctctgcg ccagcatata gccaatcatc ccctggcttt ccgccaccag
     7141 cacatccagc ggatacggtt ctacctcttt ccacgccaga ttctgtaacg ccagcagccc
     7201 cacctgcggc ccgttgccgt gaacaatcgc cagccgataa gaacgggcca ggcgtgccag
     7261 cgcgggtaca gcactggcga tattgcgata ttgattttcc gccgtcagcg cctcaccgcg
     7321 ctggagtaag gcgttgcccc caagagctac aaccagtgtt ttcatggttt ttcttgtaat
     7381 aattgttggc caagccagaa ccccagcagc gtatctgccc ctgacgtatg ccccagcgcc
     7441 agcagcgaat caatcgcaac agcggtacgt ttcgggcaac tcagagcatg gacaaagtgc
     7501 aggagtggcg aggcgaaata tccttgcgcg gcataacgta aataactgac gctcaccgct
     7561 gtggtaacga gttgaagatt gtcggaacag gcaaaaaacg ggcgaccggc gcgcgcatct
     7621 aaagcgccat aataccaagc cgccagcagc attccgctca acgtgtcatc atgacttggc
     7681 gttaatccgg ggcctttacc cagccagtgc agccagtcgg tcttaacgcc attgagcgcg
     7741 gcctgaaaac agtgacgaaa ctggcgtaat tcagcggtca gcggatcgct tgccgccatc
     7801 gccagtggtc cgaaaagtcc ggtttcctcc gcgcgttgca tccatgcagc tgcaagcggt
     7861 tgaggatgcg aaggcggcgt aatacgcagc aaacaataac gctgtggctg tttaaccgtg
     7921 aaacgcccga ggcgaatccc ttgagccaca acctgtggtc gttcattgcc gcataatcca
     7981 ccgcataacg catcgaattg cgcgcggcga agcacccatc ctccggggcc gaaaccacta
     8041 ccctgacgat gcagcgttaa cagttcgccg ctttccgtca tcaggttaat cgcccgccgc
     8101 cacactcccg ctaaccgcca ggactggcga taattcggtg cgctactgct ggcaagcaga
     8161 ggatggatga tcgtcattgc gcgttcctca accaatcccc atgctttcag ccagtgcttc
     8221 cagcgcctgt tcaaagcacg ccagcggtgc ccgcacggtg cctgcgccaa tctgcccgat
     8281 ccccgcctct ttatgggcga taccggtatt gatgagtggc gtaatgccgg tttctaccac
     8341 gcgacgaata tccagcccca ggcacgcgcc ctgaaaatcc cagcctggga tctgcaactg
     8401 catattgcgt tcaaggtaaa tttccgccat ctcttcagat accgccctgg ccgcttccat
     8461 gccacccgca ccgacaaagc gcgttacgcc aggcgctgcg atcattgccg cacctccgat
     8521 accaaaggtt tcggtaatcg cgctatcgcc catatccggg ttcgcctgct cctgcgagaa
     8581 gccggtgaaa aacagacctt gcggagtgtt tacaggcgca gtaaaccagc gttcacccag
     8641 cccgcttacc cgaatcccga acatattgcc gttgcgggtc atagccgtaa cgatgctgcc
     8701 tgcgcggatc atcgcgccag catccatcgc cgccttgcag taggccatcg cgaggttgag
     8761 gaagaactga tcggtcacgc tgaggaaatc gatcacttcc gcaatgtgct gtttatcatg
     8821 atcgaggcga gcaatttgtg gggccagcgt acgcattaac agtgctgagg aagcaatatt
     8881 gcgttgatgg aactcatcgc ccatcgtaat gccctgcgcc atcatcgccg tgagatcgat
     8941 accgcgctcc atgcgcccca gcgccgcgct taatactggc attaacacat cgcgcatcca
     9001 gcgatggcga gtcaggacat cttcgccgta agcgccaaaa cgcatcactt tgccgatacc
     9061 ttcgttgagg ttgcagtacg cccggttgcc gtcggtcacg ttctcgacca ccagcattgg
     9121 catactggca gaagtaatgc cgcccattgg cccgacggca ttcacatggt gacaaggaat
     9181 gaagttcact tccccctggt ccagcatcgc cagtgcctgc gcttcatctt tcgcccagcc
     9241 ttcgaacaga catgcgccca cgcacgcccc tttcatgggt ccggtcatct cctgccagcg
     9301 cattggcggc ccggcgtgaa gcagtgtttt gccctcgttt agttcgctga taagtgaaaa
     9361 agccggttgc acatccagcc agtgtggacg agcacgacga atttgttcga taaccgcagc
     9421 attggcttgc gccactgatg taaacatggg aaccccttat tgcaaacgtt ctaataaacg
     9481 agccagtttt ttattgccgc cggcgactgg cgaccattgg taatgcacaa ccggtttgct
     9541 ggcgctttgt agctccagcg caaagctgcg taatccgatg ttaatcacgg cgacgttttc
     9601 cagtaatg
//
LOCUS       DADMHC010000153         9485 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.156, whole genome shotgun sequence.
ACCESSION   DADMHC010000153 DADMHC010000000
VERSION     DADMHC010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9485
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.156"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(72..260)
                     /locus_tag="JNZ57_003081"
     CDS             complement(72..260)
                     /locus_tag="JNZ57_003081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829208.1"
                     /translation="MLTRKCIDPVLLSVGAEKLSQREWDWMKMLKPMDPPPAMVAASI
                     LERRGDTAALTRLQDTGG"
     gene            316..1386
                     /locus_tag="JNZ57_003082"
     CDS             316..1386
                     /locus_tag="JNZ57_003082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001249766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3748 domain-containing protein"
                     /protein_id="HAY8829209.1"
                     /translation="MRQQQDEQGRFSICSRQAAVVHPKSEKYVFIHGPENPDETWYYD
                     FHHRRGVIAEGGKVSNLDAMDITAPYTPGALRGGSHVHVFSPNGERVSFTYNDHVMHE
                     LDPALDLRNVGVAAPFGPVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEE
                     GWVGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGWKAAGDAPLSGTETTLPAPPRG
                     VVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPR
                     QLTHNKTDIQSAFNWHPSGEWLGFVLDNRIACAHAQSGEVEYLTENHANPPSADAVVF
                     SPDGQWLAWMEGGQLWITETDR"
     gene            complement(1388..1720)
                     /locus_tag="JNZ57_003083"
     CDS             complement(1388..1720)
                     /locus_tag="JNZ57_003083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418143.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HAY8829210.1"
                     /translation="MIRNVLLAFMICSGMTLLGGCSSVMSHTGGKEGTYPGTRASATM
                     IGDDETNWGTKSLAILDMPFTAVMDTLLLPWDVFRKDSSVRSRVEKSEANAQATNAVI
                     PPARMPDN"
     gene            2026..2439
                     /gene="ibpA"
                     /locus_tag="JNZ57_003084"
     CDS             2026..2439
                     /gene="ibpA"
                     /locus_tag="JNZ57_003084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock chaperone IbpA"
                     /protein_id="HAY8829211.1"
                     /translation="MRNFDLSPLYRSAIGFDRLFNHLENNQSQSNGGYPPYNVELVDE
                     NHYRIAIAVAGFAESELEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLA
                     ENIHVRGANLVNGLLYIDLERVIPEAKKPRRIEIN"
     gene            2551..2979
                     /gene="ibpB"
                     /locus_tag="JNZ57_003085"
     CDS             2551..2979
                     /gene="ibpB"
                     /locus_tag="JNZ57_003085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709512.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock chaperone IbpB"
                     /protein_id="HAY8829212.1"
                     /translation="MRNFDLSPLMRQWIGFDKLANALQNAGEGQSFPPYNIEKSDDNH
                     YRITLALAGFRQEDLEIQLEGTRLSVKGTPEQPKEEKKWLHQGLMNQPFSLSFTLAEN
                     MEVSGATFVNGLLHIDLIRNEPEPIAAQRIAISERPALNS"
     gene            3175..4836
                     /locus_tag="JNZ57_003086"
     CDS             3175..4836
                     /locus_tag="JNZ57_003086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HAY8829213.1"
                     /translation="MSDIALTVSILALVAVVGLFIGNVKFRGIGLGIGGVLFGGIIVG
                     HFVSQAGMTLSSDMLHVIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVI
                     IGGLVTAILHKLFDIPLPVVMGIFSGAVTNTPALGAGQQILRDLGTPMEMVDQMGMSY
                     AMAYPFGICGILFTMWMLRVIFRVNVETEAQQHESSRTNGGALIKTINIRVENPNLHD
                     LAIKDVPILNGDKIICSRLKREETLKVPSPDTIIQLGDLLHLVGQPADLHNAQLVIGQ
                     EVDTSLSTKGTDLRVERVVVTNENVLGKRIRDLHFKERYDVVISRLNRAGVELVASGD
                     ISLQFGDILNLVGRPSAIDAVANVLGNAQQKLQQVQMLPVFIGIGLGVLLGSIPVFVP
                     GFPAALKLGLAGGPLIMALILGRIGSIGKLYWFMPPSANLALRELGIVLFLSVVGLKS
                     GGDFVNTLVNGEGLSWIGYGALITAVPLITVGILARMLAKMNYLTMCGMLAGSMTDPP
                     ALAFANNLHPTSGAAALSYATVYPLVMFLRIITPQLLAVLFWSIG"
     gene            complement(4833..5549)
                     /locus_tag="JNZ57_003087"
     CDS             complement(4833..5549)
                     /locus_tag="JNZ57_003087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HAY8829214.1"
                     /translation="MIYKSIAERLRIRLNSADFTLNSLLPGEKKLAEEFAVSRMTIRK
                     AIDLLVAWGLVVRRHGSGTYLVRKDVLHQTASLTGLVEVLKRQGKTVTSQVLIFEIMP
                     APPAIASQLRIQINEQIYFSRRVRFVEGKPLMLEDSYMPVKLFRNLSLQHLEGSKFEY
                     IEQECGILIGGNYESLTPVLADRLLARQMKVAEHTPLLRITSLSYSESGEFLNYSVMF
                     RNASEYQVEYHLRRLHPEKS"
     gene            5844..7460
                     /locus_tag="JNZ57_003088"
     CDS             5844..7460
                     /locus_tag="JNZ57_003088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312650.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HAY8829215.1"
                     /translation="MLSQIQRFGGAMFTPVLLFPFAGIVVGLAILLQNPMFVGESLTD
                     PNSLFAQIVHIIEEGGWTVFRNMPLIFAVGLPIGLAKQAQGRACLAVMVSFLTWNYFI
                     NAMGMTWGSYFGVDFTQDAVAGSGLTMMAGIKTLDTSIIGAIIISGIVTALHNRLFDK
                     KLPVFLGIFQGTSYVVIIAFLVMIPCAWLTLLGWPKVQMGIESLQAFLRSAGALGVWV
                     YTFLERILIPTGLHHFIYGQFIFGPAAVEGGIQMYWAQHLQEFSLSAEPLKSLFPEGG
                     FALHGNSKIFGAVGISLAMYFTAAPENRVKVAGLLIPATLTAMLVGITEPLEFTFLFI
                     SPLLFAVHAVLAASMSTVMYLFGVVGNVGGGLIDQVLPQNWIPMFSNHADMMLTQIAI
                     GLCFTLLYFVVFRTLILQFNMCTPGREDAEVKLYSKAEYKASRGQTTAAEPKKELDQA
                     AGILQALGGVGNISSINNCATRLRIALHDMSQTLDDEVFKKLGAHGVFRSGDAIQVII
                     GLHVSQLREQLDSLINSHQSAENVAITEAV"
     gene            7460..8783
                     /locus_tag="JNZ57_003089"
                     /pseudo
     CDS             7460..8783
                     /locus_tag="JNZ57_003089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312649.2"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-alpha-glucosidase"
     gene            complement(8780..8854)
                     /locus_tag="JNZ57_003090"
                     /pseudo
     CDS             complement(8780..8854)
                     /locus_tag="JNZ57_003090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709516.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            complement(8914..9345)
                     /gene="tnpA"
                     /locus_tag="JNZ57_003091"
                     /pseudo
     CDS             complement(8914..9345)
                     /gene="tnpA"
                     /locus_tag="JNZ57_003091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313209.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
     gene            9353..>9485
                     /locus_tag="JNZ57_003092"
     CDS             9353..>9485
                     /locus_tag="JNZ57_003092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY8829216.1"
                     /translation="MKRLQAFKFQLRPGGQQEREMRRFAGACRFVFNRALARQNENHE
                     "
BASE COUNT         2208 a         2363 c         2518 g         2396 t
ORIGIN      
        1 gtccagcact ggttggccgt gaacagacgt ttcagcgggc ggggagtaaa agcggacaac
       61 atgaggacgg attaaccccc ggtatcctgt agccgggtaa gggctgctgt gtcgccacgg
      121 cgctccagga tggaggccgc gaccatcgca ggtggtgggt ccatgggttt gagcatcttc
      181 atccagtccc attcacgttg tgagagcttc tcagcaccaa cagagagcag aacgggatct
      241 atacatttgc gggtcaacat aagaggatga gtccttaata aaacaggtcc tcagagcata
      301 catattctgc ggagcgtgcg gcaacaacag gacgaacagg ggcggttttc aatttgcagc
      361 cgtcaggctg ccgtggttca tccgaagtca gagaaatatg ttttcatcca tggcccggaa
      421 aatcctgatg aaacatggta ttacgatttc catcatcgac gcggagtcat tgctgaaggc
      481 ggcaaggtga gcaatctcga tgcaatggat attaccgcgc cgtatacgcc aggagcgctg
      541 cgcggcggca gccatgtgca tgtctttagc ccgaacggtg aaagggtgag ctttacctat
      601 aacgaccatg taatgcatga actcgatccg gcgctggatt tgcgaaacgt cggtgttgct
      661 gcgccgtttg gcccggtcaa cgtacaaaag cagcatccgc gtgaatacag cggtagccac
      721 tggtgcgtgc tggtgagtaa aaccacgccc acgccgcagc ctggcagcga tgaaatcaat
      781 cgtgcttatg aagaaggatg ggtaggaaat cacgcgctgg cgtttattgg cgacacactt
      841 tcgccaaagg gcgagaaagt gccggagctg tttatcgttg agttaccgca agatgaagct
      901 ggctggaaag cggcaggtga tgcgccgtta agtggaacgg aaaccaccct gcccgcgcca
      961 ccgcgcggcg tcgtgcagcg acgtttaacc tttacccacc atcgggctta tccggggtta
     1021 gtcaacgtcc cgcgccactg ggtgcgctgt aatccgcagg gtacgcaaat cgcgttttta
     1081 atgcgtgatg ataacggcat tgtgcaactg tggcttatct cgccacaggg cggcgagccg
     1141 cgccagttaa cccataacaa aacggatatt cagtctgcat ttaactggca tccgtcagga
     1201 gaatggttgg gctttgtgct ggataatcga attgcttgtg cccatgcgca aagtggcgag
     1261 gttgagtatt taaccgaaaa ccacgccaat ccaccttctg cggacgccgt ggtcttctcg
     1321 ccggatggtc aatggctggc gtggatggaa ggcggccagc tgtggatcac cgaaactgat
     1381 cgctaaatca gttatcaggc attctggccg gtggaataac cgcattggtg gcttgcgcgt
     1441 tggcttcgct tttttcaacg cgtgagcgca ccgagctgtc tttgcggaac acatcccacg
     1501 gcagtaaaag cgtgtccatc acagcggtaa acggcatatc gagaatcgcc agcgacttag
     1561 tgccccagtt ggtttcatcg tcgccaatca tggttgcgct ggcgcgggtg ccgggatacg
     1621 ttccttcttt ccctccggta tgggacatca cgctggagca tcctccgagt aatgtcattc
     1681 cgctgcatat catgaacgct aacaacacat ttcttatcat aataaattca tctgttgatc
     1741 gtgggtgttg gcctgatgag ttatagcgat cccttgctga aaataacatc atcattacgt
     1801 cgcactgtgg cggctatcgc actttaacgt ttcgtgctgc cccctcagtc tatgcaatag
     1861 accataaact gcaaaaaaaa gtccgctgat aaggcttgaa aagttcattt ccagacccat
     1921 ttttacatcg tagccgatga ggacgcgcct gatgggtgtt ctggctacct gacctgtcca
     1981 ttgtggaagg tattacattc tcgctgattt caggagctat tgattatgcg taactttgat
     2041 ttatccccgc tttaccgttc tgctattgga tttgaccgtt tgtttaacca cttagaaaac
     2101 aaccagagcc agagtaatgg cggctaccct ccgtataacg ttgaactggt agacgaaaac
     2161 cattaccgca ttgctatcgc tgtggctggt tttgctgaga gcgaactgga aattactgcc
     2221 caggataatc tgctggtggt gaaaggtgct cacgccgacg aacaaaaaga gcgcacctat
     2281 ctgtaccagg gcatcgctga acgcaacttt gaacgcaaat tccagttagc tgagaacatt
     2341 catgttcgtg gggctaacct ggtaaatggt ttgctgtata tcgatctcga acgcgtgatt
     2401 ccggaagcga aaaaaccgcg ccgtatcgaa atcaactaat tccctaaggc cgcctgacgc
     2461 ggcctgacat ctccatgctc gccgtcaggg agcatatgcg aatcttcgga tttgcaggta
     2521 cttactcgct tcttagaagg agaaatgact atgcgtaact tcgatttatc cccactgatg
     2581 cgtcaatgga tcggttttga caaactggcc aacgcactgc aaaacgccgg tgaaggccag
     2641 agcttcccgc cgtacaacat tgagaaaagc gacgataacc actaccgcat tacccttgcg
     2701 ctggcaggtt tccgtcagga agatttagag attcaactgg aaggtacgcg cctgagcgta
     2761 aaaggcacgc cggagcagcc aaaagaagag aaaaaatggc tgcatcaagg gcttatgaat
     2821 cagccattta gcctgagctt tacgctggct gaaaatatgg aagtctctgg cgcaaccttc
     2881 gtaaacggtt tactgcatat tgatttaatt cgtaatgagc ctgaaccgat cgcagcgcag
     2941 cgtatcgcta tcagcgaacg tcccgcgtta aatagctaac tagctattct ctttgccccg
     3001 ccattctggt ggggcttttt ttgtctttct tcttcaacaa tgcgttaaat ttcgactgtt
     3061 taagatattt cggcacgttc tttcccgtga taatgtgcgc tataaggcaa atctgcttca
     3121 ccgattcagc cataatccgt agcaattaaa atgttatctc aagagaaatg gacgatgagt
     3181 gatatagcat taacggtcag tattctggct ttggtggcag tcgtcggttt gtttatcggc
     3241 aacgtcaaat ttcgcggcat aggattaggt attggcggcg tgctgtttgg tgggatcatc
     3301 gtcggccatt ttgtttctca ggcggggatg acattaagta gcgatatgct gcatgttatt
     3361 caggaatttg gcctgatcct gttcgtttat accatcggga ttcaggtagg gccgggcttc
     3421 tttgcctcat tgcgcgtctc cggattacgc ctcaacctgt ttgctgttct aatcgtcatc
     3481 atcggtggtc tggttaccgc catcctgcat aaactgtttg atattccact gccggtagtg
     3541 atggggattt tctccggtgc ggttaccaat acgccagcgc tgggggcagg gcagcagatc
     3601 ttgcgcgacc tgggtacacc aatggaaatg gtcgatcaga tggggatgag ttacgcgatg
     3661 gcgtatccat tcggcatttg cgggattttg ttcaccatgt ggatgttgcg ggttattttc
     3721 cgcgtcaatg tcgagacaga agctcagcag cacgagtctt cacgcaccaa tggcggcgcg
     3781 ctgatcaaga ctatcaatat tcgcgttgag aaccctaacc tgcatgattt agccattaaa
     3841 gatgtaccga ttctcaacgg cgacaaaatt atctgctcgc gtctgaaacg cgaagaaacc
     3901 ctaaaagttc cttcgccaga taccattatc caactgggcg atttgctgca tctggtgggg
     3961 cagccagcgg atttacataa tgcgcaactg gtgattggtc aggaggtcga tacttcgctg
     4021 tccacgaaag gcactgattt gcgcgtcgag cgtgtggtgg tcaccaatga aaacgtgctc
     4081 ggaaaacgta ttcgcgacct gcactttaaa gaacgctatg acgttgttat ctcgcgcctg
     4141 aaccgtgccg gggtcgaact ggtcgccagt ggcgatatca gcctgcagtt cggcgatatc
     4201 ctcaatctgg tggggcgtcc gtccgcaatt gatgccgttg ccaatgtgct ggggaatgcg
     4261 cagcaaaaac tgcaacaggt tcagatgctg ccagtgttta ttggcatcgg gcttggcgta
     4321 ttgttaggtt ctattcccgt ctttgtgcct gggttcccgg ccgcgttgaa actggggctg
     4381 gcgggcggtc cgctgattat ggcgttgatc ctcgggcgta tcggcagtat cggcaagctg
     4441 tactggttta tgccgccaag tgccaacctc gcgctgcggg agctggggat cgtgctgttc
     4501 ctctcggtcg ttggtctgaa atctggtggg gattttgtga ataccctggt caatggcgaa
     4561 gggctaagct ggattggtta tggtgccctg atcaccgccg ttccgctgat tactgttggc
     4621 attctggcgc ggatgttagc caaaatgaat tacctgacca tgtgcgggat gctggcaggt
     4681 tccatgaccg atcctccggc gctggcgttt gctaataatc ttcatccaac cagtggtgcg
     4741 gcggcgctct cttacgccac tgtctatccg ttagtgatgt ttctgcgaat tatcaccccc
     4801 caattactgg cggtgctctt ctggagtatc ggttaactct tttccgggtg gagtcgccgt
     4861 aaatggtact ccacctggta ttcgctggca tttctgaaca tcactgaata attcaaaaac
     4921 tccccgctct cgctatatga caacgaggtg atccgcagca gtggcgtgtg ttccgctacc
     4981 ttcatttgcc gcgccagcag tctatcggcg agcaccggcg tcaggctttc ataattaccg
     5041 ccaatcaaaa tcccacactc ttgttcaata tattcaaact tcgacccttc cagatgttgc
     5101 agcgaaagat tacggaacag tttaaccggc atatagctgt cttccagcat cagcggtttc
     5161 ccttccacaa aacgaacgcg acgggagaag tagatctgct cgttgatttg aatccgtaac
     5221 tggctggcaa tggccggagg cgcaggcatg atttcaaaaa tcagcacctg gctggtgacc
     5281 gtttttccct gccgttttaa cacctccacc agtccggtca ggctggcggt ttgatgcagc
     5341 acatctttgc gcaccaggta agtgccgctg ccgtggcggc ggaccaccag cccccacgct
     5401 accagcaggt caatcgcttt acggatggtc atccgggata ctgcaaattc ttccgccaac
     5461 tttttttcac cgggaagaag gctgtttagc gtgaaatccg cggaattaag tcgaattctt
     5521 aaccgctccg caatgctttt gtagatcatc tctagatctc ttttttgcct gcaagcccgg
     5581 gtaatgcgcc cacaagttct gcttaatcga ttgaaaaaac atcttttttt aaagatgtgt
     5641 tcgatgctgt gtaccagtgc tcacagatgt ctactttttc gcgaaaacgt agatctctac
     5701 cgcccaacga aaagcatgaa agcgatcacg aatcccattg ggtcgtcatg ttctgccgat
     5761 cgcatcttcc tatcctcgct ccaggcctgc cgcataacca atcaggcttc ctacttacag
     5821 aattgagaaa agaggatgtg gaaatgctca gtcaaattca acgctttggc ggcgcgatgt
     5881 tcacgccagt gctgctgttt cccttcgccg ggattgtggt gggtcttgcc atcttgctgc
     5941 aaaacccgat gtttgtcggg gaatcactga ccgatccgaa cagtttattc gcgcaaatcg
     6001 tacacattat tgaagagggc ggttggacgg tattccgtaa tatgccgctg atttttgctg
     6061 tcggtttacc cattggcctt gctaagcaag cgcaggggcg tgcttgtctg gcggtgatgg
     6121 tgagtttcct gacctggaac tatttcatca acgcgatggg aatgacctgg ggaagctact
     6181 tcggcgtcga tttcactcag gacgcggtgg caggtagcgg tctgacaatg atggccggga
     6241 ttaaaaccct cgataccagc attatcggcg caattatcat ttccggcatt gtgacggcgc
     6301 tgcataaccg tctgttcgat aaaaaactgc cggtttttct cggcattttc caggggacgt
     6361 cttatgtggt gattatcgcc ttcctggtga tgatcccctg tgcctggctg acgttgctcg
     6421 gctggccaaa agtacaaatg gggattgaat ctctgcaagc gttcctgcgt tcggcgggtg
     6481 cacttggggt gtgggtttac accttcctcg aacgtattct gatcccaacc ggtttacacc
     6541 acttcatcta cggacagttt atctttggtc cggcagctgt tgaaggcggc attcagatgt
     6601 actgggcgca gcatctgcaa gagttcagtc tgagcgccga gccgctgaaa tcgttgttcc
     6661 cggaaggcgg ttttgccctg cacggtaact caaaaatctt tggtgccgtg ggcatttctt
     6721 tagcgatgta cttcactgcc gcaccggaaa atcgggtaaa agtggcgggc ttgctgattc
     6781 ccgcaacctt aaccgccatg ctggtgggaa ttaccgaacc gctggaattt accttcctgt
     6841 tcatttcacc gttgctgttt gcggtacacg ccgtgctggc ggcctcaatg tcgaccgtga
     6901 tgtatctctt tggtgtggtg ggcaacgtgg gcggaggtct gattgaccag gttttaccgc
     6961 aaaactggat cccgatgttc agcaaccacg cggatatgat gctgacccaa atcgccattg
     7021 ggttgtgctt taccctgctg tacttcgtgg ttttccgcac actgattctg caattcaaca
     7081 tgtgcacgcc gggacgtgaa gatgcggaag tgaaactcta ctcaaaagcc gaatacaaag
     7141 cctcgcgagg ccaaaccacc gctgcagagc caaaaaaaga gctggatcag gctgccggta
     7201 tcctgcaagc cctgggcggg gtcggcaata tctccagcat taacaattgc gcgacgcgtt
     7261 tacgtattgc actgcatgac atgtcacaaa cgctggatga cgaagtcttt aaaaagctgg
     7321 gagcgcacgg cgtcttccgt agtggcgatg ccattcaggt gatcattggt ctgcatgtat
     7381 cccagctgcg tgaacagctc gatagcttaa ttaattctca tcaatcagca gaaaatgttg
     7441 ccattacgga ggcagtataa tgaccaaatt ctcagtggtt gtcgcaggcg gtggaagcac
     7501 ctttacgcca ggtatcgtgt tgatgctcct ggcgaatcag gaccgtttcc cgcttcgtgc
     7561 actgaaattt tatgataacg atggtgcgcg gcaggaagtg attgccgaag cctgtaaagt
     7621 catccttaaa gagaaagcgc cggacattgc gtttagttac accaccgatc ctgaagtggc
     7681 attcagcgac gttgattttg tcatggcgca catccgcgtc ggcaaatacc cgatgcgcga
     7741 actggatgaa aaaatcccgc tgcgccacgg cgttgttggt caggaaactt gcggacccgg
     7801 cggaatagcg tacggcatgc gttccattgg cggcgtcctg gaactggtgg attatatgga
     7861 aaaatattca ccaaatgcct ggatgctcaa ctactccaac ccggcagcaa ttgtcgcaga
     7921 agccacgcgt cgtctgcgcc cgaatgcgaa aatcctcaac atctgtgaca tgccaatcgg
     7981 tattgaaagc cggatggcgc aaattgttgg gatgcaagat cgcaaacaga tgcgcgtgcg
     8041 ctactacggc ctgaaccact ttggctggtg gacatcaatt gaagatttgc agggcaacga
     8101 cctgatgccc cagctgcggc aatatgtctc taagcacggt tatgttccac cgcagcaaga
     8161 tacacatact gaagcgagct ggaacgacac ctatgcaaaa gcgcgggatg tccaggcact
     8221 ggacccggat acattgccga acacctatct gaaatattat ctcttcccgg attatgttgt
     8281 tcagcattcc aaccctgaac atacccgcgc gaatgaggtg aatggaacat cgcgagaaac
     8341 aggttttcga tgcttgccgc gccattacag cggcaggaaa ttcagcggcg gccaagctgg
     8401 agattgacga acatgcgtca tacatcgtcg atctggcggc ggcaattgcc ttcaacactc
     8461 aggagcggat gttgctgatt gtgcctaaca acggggcaat ccataacttt gatgatgaag
     8521 cgatggtcga gatcccgtgt ctggtcgggc acaacggacc agaaccactg gtggtcggcg
     8581 atatcccgta gtttcagaaa gggttaatga gtcagcaagt ggcggtggaa aaactggtcg
     8641 tggacgcctg ggaacagcgt tcatatcagc acctgtggca ggcgattacg ttatcgaaaa
     8701 cggtaccgag cgcctcggtc gccaaagcta ttcaggatga gttgctggag gccaacaaag
     8761 cgtactggcc agagttacgt taattgtgtg gactggcatc cgttgggtgc tggtccgtat
     8821 tctttagcac ggctgacggc gcataaccaa atttatccgg tgcgccgtaa aaccccgtcc
     8881 ttcagggcgg ggatataagg cgcggttttc cacctaacca ggtgtttgct gttgttcaat
     8941 gtattggcgg atgacggata ttggcgcacc tccgcagcta ttggcaaaat agccaggact
     9001 ccacaaaacg cctttgtagt aatacctgac tgcaatatct ggtcgatctc gtcgcagtaa
     9061 cctacccgat acgcctttga ggctgtttac cagactggat atcgccagtt tgggaggata
     9121 gttaattaac aaatggacgt gatctggttc gccatccatt taaaccagtt cagcttcaaa
     9181 atcagcacat acatttgaaa agtaagtgcg tagtttttct gtcgcgtcat agtcaaaaat
     9241 ctgacgtcgg tatttggtga caaagaccag gtgaacatgc atcaggaaaa cacaatgcct
     9301 tccacgccgg atatcggttt cttttttcac agaccaaagt atcatttggc ctgtgaaacg
     9361 actacaagca tttaaattcc agttaagacc cggtggtcaa caggagcgtg aaatgaggcg
     9421 cttcgcaggc gcatgtcgtt tcgttttcaa tcgtgctctg gcacgtcaga atgagaatca
     9481 tgagg
//
LOCUS       DADMHC010000154         9449 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.157, whole genome shotgun sequence.
ACCESSION   DADMHC010000154 DADMHC010000000
VERSION     DADMHC010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9449)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9449)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9449
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.157"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..136)
                     /locus_tag="JNZ57_003093"
     CDS             complement(<1..136)
                     /locus_tag="JNZ57_003093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3950 domain-containing protein"
                     /protein_id="HAY8829217.1"
                     /translation="MSSKNRTRRTTTRNIRFPNHMIEQINIALEHKGSGNFSAWVIEA
                     C"
     gene            178..543
                     /locus_tag="JNZ57_003094"
     CDS             178..543
                     /locus_tag="JNZ57_003094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001427183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HAY8829218.1"
                     /translation="MAELRTLQSRIKTLNTRRVNILKGEQRRVSGSARVSLKRHIWLR
                     DTGQCRLCGRVVDLCDSELDHRIALQFGGGNEETNLWTLCTECHRQKSAREAASDMPD
                     PTLPEVSGGSGREDDIIGL"
     gene            834..1397
                     /locus_tag="JNZ57_003095"
     CDS             834..1397
                     /locus_tag="JNZ57_003095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HAY8829219.1"
                     /translation="MLTTQKRKFALALMSGKNKTASAIAAGYSAKTARVKGSQLAKDP
                     EVLAFIARKQCETVEVDEVPVYRQKKSEQEDKPRRREAAAIPQPDENNPEMPPPAVMS
                     HGIEYMEDGLPDPVKAMGQILVENLSIDPKLALDAAWRLAQFTHHKKGDAGKKSAKGD
                     AAKKAANRFAVPPPPRLVVNNDNEGNG"
     gene            1394..3055
                     /locus_tag="JNZ57_003096"
     CDS             1394..3055
                     /locus_tag="JNZ57_003096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HAY8829220.1"
                     /translation="MIPVWSTACPDWAERLKKGLSIIPAPIYPDQAAHALAIFKQLRI
                     VDAPGSPTFGESCAQWVFDLVAALFGSYDAQTGVRHIKEVFILIPKKNSKSTLAAGIM
                     MTALLLNWRQAAGYTILAPTVEVAANAFNPARDMVRRDDDLDDLCQVQTHIRTITHRV
                     TDTTLKVVAADPNTVSGIKSVGTLIDELWLFGKQYKAEDMLREAIGGLASRPEGFVVY
                     TTTQSNEPPAGVFRQKLQYARDVRDGKINDPHFLPVIFEHPPEMVESGAHLLMENLAM
                     VIPNLGYSVDEAFLYREYRKAREAGEETFRGFMSKHANVEIGLALRSDRWAGADFWEE
                     QGRCINLDDILRRADVVTVGIDGGGLDDLLGMYVIGRDRETREWLGWGHAWAHETAVV
                     RRKSEASRFQDLVACGDMTIVRRVGDDTAEVAEYVRRIHEAELLDHIGIDPSGVGQIL
                     DSLAEAGIPDGIVVGIRQGWKLGGAIKTTERKLAEGVLVHGDQPLMAWCVGNARVEPK
                     GNAILITKQASGRGKIDPLMALFNAVSLMSLNPEPKKKEYAVFFI"
     gene            3119..5055
                     /locus_tag="JNZ57_003097"
                     /pseudo
     CDS             3119..5055
                     /locus_tag="JNZ57_003097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309570.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
     gene            5100..5321
                     /locus_tag="JNZ57_003098"
     CDS             5100..5321
                     /locus_tag="JNZ57_003098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829221.1"
                     /translation="MAKIRYLQGTHDARAGDIRDVAQPCAEVLVRLGKAEYITVRRPA
                     GQKKKRDAEHGECGTFYSEPEKTRNQDVT"
     gene            5267..7587
                     /locus_tag="JNZ57_003099"
                     /pseudo
     CDS             5267..7587
                     /locus_tag="JNZ57_003099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001365916.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
     gene            7584..7910
                     /locus_tag="JNZ57_003100"
     CDS             7584..7910
                     /locus_tag="JNZ57_003100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage gp6-like head-tail connector protein"
                     /protein_id="HAY8829222.1"
                     /translation="MTALLTLEEIKAHLRVDHDADDDMLMDKVRQATAVLLAYIQGSR
                     DKVIREDGELIQGEALTRMKGAAMRLTGMLYRNPDLAEREELLQGELPFSVSVLIYDL
                     RCPTVL"
     gene            7920..8270
                     /locus_tag="JNZ57_003101"
     CDS             7920..8270
                     /locus_tag="JNZ57_003101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head closure protein"
                     /protein_id="HAY8829223.1"
                     /translation="MAISAGRLTQMISVLNPVLTRNAAGEMTEEWVSCGKIHADIRGR
                     SSRERMQSGAEMAQAEIRIWVRGQSGREITAASRLHVLSGPWRDRILNVVGLPVPDAT
                     GGRLEILCRLGGEK"
     gene            8267..8713
                     /locus_tag="JNZ57_003102"
     CDS             8267..8713
                     /locus_tag="JNZ57_003102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HAY8829224.1"
                     /translation="MIEILLDFSGLEDISRDLQLLSGAENNRVLREATRAGANVLKEE
                     VVSRTPVRRGKLRRNVVILSRRSRDGGMESGVHIRGVNPDTGNSDNTMKADNPRNAFY
                     WRFVEMGTVNMPPHPFVRPAFDVRSEQAAQVAIARMNRAIDEVLRR"
     gene            8710..9054
                     /locus_tag="JNZ57_003103"
     CDS             8710..9054
                     /locus_tag="JNZ57_003103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3168 domain-containing protein"
                     /protein_id="HAY8829225.1"
                     /translation="MTEADLYPHLAHLAGGQVYPYVAPLLDGRPSVALPWVVFSLILS
                     VSADVMGGQAESSVSVQIDVYAGTVTQARQIRQDAREAIMLLAPGSVSEMQDYIPENR
                     CYRATLEFQVTV"
     gene            9120..>9449
                     /locus_tag="JNZ57_003104"
     CDS             9120..>9449
                     /locus_tag="JNZ57_003104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829226.1"
                     /translation="MSALYERSQLTQVMISSAPATAETMDKAEYLRLDCTIKEVQFTA
                     GQKQDIDVTTLCSTEQENINGLGASSEISMSGNFYLNQAQNALRDAYDNDALYAFKVL
                     FPSGKGFK"
BASE COUNT         2081 a         2350 c         3033 g         1985 t
ORIGIN      
        1 tgcaggcttc aataacccac gctgaaaagt taccggaccc tttatgctca agggcgatgt
       61 tgatctgttc aatcatgtga ttggggaaac ggatattgcg ggttgtggtt ctgcgggtac
      121 ggtttttcga tgacatattt atttccttta ctgattgcca tatgacgggg attttacatg
      181 gctgagcttc gtacactcca gagcagaatc aaaacactga atacccgacg ggtgaatatt
      241 ctgaagggtg aacagcgtcg tgtcagtggc agtgcacgtg tttccctcaa gcgtcatatc
      301 tggctcaggg acaccgggca gtgccgtctc tgtggtcgtg tggttgacct ctgtgacagt
      361 gaactcgatc accgaattgc acttcagttc ggtggtggta atgaggagac gaatctctgg
      421 acgctctgta ccgaatgcca tcgacaaaag tctgctcgtg aagcggcgag tgatatgccg
      481 gatccgacgc tgccggaggt gtccggaggt agtggcagag aggacgacat catcggactg
      541 taacccgacc ccggggggta tcatccggcg taaaaaacga tcgctttgga caccgcgccc
      601 cctctcacgc agagaaaaaa ttcccgtttc aggccagtta acatgttaac tggctgtccg
      661 ggtatttttg cggtttttat ctttattatt cagtttgttg tgcgaaaaaa aatgttaact
      721 ggctttttca gaaaatgtta accaggcagc agttaacatt tgcggcatga gacgccggga
      781 aaaatgggct gaaccatacc cggctgagtg cgttctggac ccgggaggag gctgtgctga
      841 caacgcaaaa acgaaaattt gcgctggcgc tcatgtccgg gaaaaacaaa acagcgtcag
      901 ccattgccgc cggttattcg gcgaagaccg ccagggttaa aggctcgcag ctggcaaaag
      961 atccggaggt gctcgcgttt atagcccgta aacagtgcga aacggtggag gtggatgagg
     1021 ttcctgttta ccggcagaaa aaatcagagc aggaggataa accccgtcgc cgtgaggcgg
     1081 ctgcaatacc acagccggac gaaaacaatc cggagatgcc accgcccgcg gtgatgtctc
     1141 atggtattga atatatggag gatggtcttc ccgatccggt gaaagctatg gggcagatcc
     1201 tggtggaaaa cctcagcatt gatccgaaac tggcactgga tgcggcctgg cgactggcgc
     1261 agttcacaca ccataaaaaa ggcgatgccg gtaaaaaatc ggcaaaaggt gatgccgcga
     1321 aaaaagcggc taaccgtttt gcggtaccac caccaccacg actggtggtg aataacgata
     1381 atgagggcaa cggatgatac ctgtatggag cacggcctgc ccggactggg cagagcgcct
     1441 gaaaaagggg ctgtcgatta ttccggctcc gatttatccg gaccaggccg cacatgccct
     1501 ggcgattttt aaacaactgc ggattgtgga tgcaccgggt agcccgacgt tcggggagtc
     1561 ctgtgcacag tgggtgtttg acctggtggc ggctctgttt ggctcctacg atgcgcagac
     1621 cggtgtccgc catatcaagg aagtgttcat tctgataccc aaaaaaaaca gcaagtccac
     1681 actggccgcc gggatcatga tgacggcgct gttactgaac tggcggcagg cggcgggtta
     1741 cacgattctg gccccgactg tggaggtggc agccaacgcc ttcaatcctg ccagggatat
     1801 ggtacgacgg gacgatgatc tggatgacct ctgtcaggtg cagacacata tccggaccat
     1861 cacccaccgg gtgacggaca ccaccctgaa ggtggtggca gccgatccga atacggtgtc
     1921 cggtatcaag tccgtgggga cgctgattga tgagttgtgg ctgtttggca agcagtacaa
     1981 ggcggaggac atgttacgtg aagccatcgg cgggcttgcc tcccgcccgg aagggtttgt
     2041 ggtgtatacg accacccagt cgaatgaacc gcccgccggg gtgttcagac aaaaactgca
     2101 gtacgcccgg gatgtgcgcg acggcaaaat taatgatccg cactttctgc cggtgatatt
     2161 tgaacaccct cctgaaatgg tggaaagcgg ggctcacctg ctgatggaaa acctcgccat
     2221 ggtcattccg aatctcggct attcagtgga tgaggccttt ctgtaccggg agtaccgtaa
     2281 agcccgggaa gccggtgaag agacattccg ggggttcatg tcaaaacacg ccaatgtgga
     2341 aattggtctt gccctgcgct ctgaccgctg ggcgggggct gatttctggg aagagcaggg
     2401 ccgttgtatc aacctggacg atatcctgcg tcgtgctgat gtggtgacgg tggggattga
     2461 cggcggaggg ctggatgatc tgctggggat gtatgtgatt gggcgtgacc gggagacccg
     2521 cgaatggctg ggctggggcc atgcctgggc gcatgaaacc gcggtggtcc gacggaagag
     2581 cgaggcgtcc cggtttcagg atcttgttgc ctgtggagat atgaccattg tccggcgtgt
     2641 cggggatgac acggcggaag tggcggaata tgtgcgtcgc attcatgagg ctgagttact
     2701 ggaccatatc ggtattgacc cgtcaggggt ggggcagatt ctggattcac tggcggaagc
     2761 cgggatcccc gacggaattg tggtggggat acgccagggc tggaaactgg gcggggccat
     2821 taaaaccacc gagcgcaaac tggctgaagg ggtgctggtg catggtgacc agcccctgat
     2881 ggcctggtgt gtcggcaatg cccgggtgga gcctaaaggt aacgccattc ttatcaccaa
     2941 acaggccagt ggacggggaa aaattgaccc gctgatggcg ctgttcaatg cggtctccct
     3001 gatgtccctt aacccggaac cgaaaaagaa agaatatgcg gtttttttca tataaccctg
     3061 ttcacactgt aaccatcacg aaccgctccg gcggtttttt tattttcagg aggctgatgt
     3121 gactcttaaa cgggcctgtt ccctgctgac ggtgaaatcc ttcagtgagg atgaatgggt
     3181 gatcaccggg attgcgtcaa cgccttctcc ggatcgggat ggtgacatcc tggagccgga
     3241 gggcgcggag tttggcagtg cgatcccgtt tctctggcag catgaccatt cccgcccggt
     3301 ggggcaatgt acggtgcgcc gggtcagcga agggctggaa atcacggcaa cactggtgaa
     3361 gcccgtaccg gatatgccgt cgcaactggc tgcccggctg gatgaggtct gggcggccat
     3421 taagaccggg ctggtcaggg gctgtccgtg ggcttccgtc cccatgaata cacctttctg
     3481 gacggaggcg gactgcattt tctgcgctgg gaactgatgg aggtgtctgc cgtcaccgtg
     3541 cccgcgaatg cggaatgcac catccggacc attaaatctt acgacagccc gttttctgcc
     3601 gcgtccggca accggaaacc ggtggtgaaa atcgcatctt ctgccggcgc tgcggcacag
     3661 tcaacaaccg tttttcataa ggaaaagacc ataatgaata ttggcgaaca gattaaaagt
     3721 tttgaaaaca agcgtgtagc gctggcagcc tcccttgagg aggtcatgac caaagccgca
     3781 gaggaagggc gcacgctgga tgtggaggag gaagagcatt acgacaacac cgcagcggaa
     3841 atccgtcagg tggatgcgca cctgaagcgc ctgcgtgaac tggaagccgg taaggccgcc
     3901 acggcgcagc cggtgaaaca ggccggtaac gggaatgtgg ccgcggtggc ttctgcgccg
     3961 gtgatccgtg tggagcagaa actggataag gggattggct tcgcccgctt tgccaaatcg
     4021 ctggctgcgg ctaaaggcgt ccgatctgaa gccctggaag tggcccgtcg tcagtatccg
     4081 gatgacagtc gtctgcatca tgtcctgaaa tcggcagtgg gcgcggggac caccacggat
     4141 ccgcagtggg caggcagcct gtctgaatat caggaatacg cacaggactt tattgattac
     4201 ctgcgtccgc agaccattat cgggcgattt ggtcagggcg ggatccctgc acttcgtcag
     4261 gtgccgttca atatccgtgt gcacgcccag gtgtccggcg gtgctgccgg ctgggtgggt
     4321 gagggtaagg caaaacccct gacgaagttt gattttgaat ccatcacctt cagtcatgcg
     4381 aaggtgtcgg ccattgcggt actgacggaa gagctgatcc gtttttccag tccggcagct
     4441 gatgcgctgg tccgtaatgc gctggcagaa gcggtggtgg cgcgtctgga cacagacttt
     4501 gtggacccga aaaaagccgc agtggcagat gtctccccgg cgtccatcac ccatgatgtg
     4561 aagggcaagg catcaaccgg taacccggat gcggatacag aggcggcgtt tggacagttt
     4621 gtggcagcga acctgcagcc caccggtgcg gtctggctga tgtccagcac caatgccctg
     4681 gcgctgtcca tgcgtaaaaa tacgctgggt cagaaggaat acccggacat gaccctgctg
     4741 ggggggacct tccaggggct gccggtgatt gtctcccagt acgtgggtga ccagctggtg
     4801 ctggtgaatg ccccggatat ttatctggcg gatgacggcg gcgtggcagt ggatatgtcc
     4861 cgcgaggcat cactggaaat gcagtctgag ccgaccggcg acagtaccac gccgtcgccg
     4921 gtggagctgg tttccatgtt ccagacaggc agtgtggcca tccgtgcgga gcgctggatc
     4981 aactggcgtc gtcgccgtac cgcggcggtg gcggtgatca ccggtgtgaa ctacggcagt
     5041 gcgtccggcg gctgagtctg ataaggagga cgggaggcga gcgcctcccg taacaggtta
     5101 tggcaaagat ccgatatctg cagggcacgc atgatgcccg ggccggggat atccgtgatg
     5161 tggcacagcc gtgcgcggag gtgctggttc gcctgggaaa ggcggagtac atcacggtgc
     5221 gacgtccggc aggtcagaaa aagaaacgtg atgcggagca tggcgaatgt ggaacctttt
     5281 acagcgaacc cgaaaaaacc agaaatcagg acgtgacgta agagaggcgg gctggaccag
     5341 cctgtttcag gcggtggctg agcccttttc cggcgcctgg cagcagggcg tgaaagccga
     5401 tccggaagcc gtcctctcct ttcatgcggt gttttcgtgc atttcgctga tatcccagga
     5461 tatcgccaaa atgcggctgc gtcttatgca gacggatgcg caggggatac gcagggaaac
     5521 tcgccggggg gatattgccc gcctctgtcg tcgtcccaac gcccagcaga accgcatcca
     5581 gttttttgaa ctgtggctga acgccaaact gcgtcacggc aatacggtgg tgctgaaaat
     5641 ccgtaactcc cgggggcaga tcaaagaact gcgcattctg gactggagcc gggttgaacc
     5701 actggtggcg gatgacggcg aagtgttcta ccgcatcacg ccggaccgga actgcgggat
     5761 cactgaggcg gtgacggtgc ctgcccggga agtgatccac gaccggttta actgtttttt
     5821 tcatccgctt atagggttgc cgccggtgta tgccgccggg ctgaccgcca cgcaggggca
     5881 tcatattcag gaaaattcga cgtatttttt cagaaatggc ggggaaaacg gccattctga
     5941 gcaacggggc aaaatacaac cccacgacgt tttcaccggt ggatgcgcag acggtggaac
     6001 aactgaagat gaccgctgaa attgtctgtt cggtgttccg tgtcccggcc tacaagattg
     6061 gcgtgggaca accgccttcc agtgacaacg tggaggcgct ggagcagcag tattattccc
     6121 agtgcctgca gacgctgatt gagtccattg aactgttact ggatgaggcg ctggaaacgg
     6181 gggaaaacga gagtacagaa tttgatgtca ccacgctgct gagaatggac agtgagcggc
     6241 gcatgaaaac gctgggggat gccgtgaaaa atacgcttct cacgcccaat gaggcccgta
     6301 aacgggagaa cctgccgccc ctggccggcg gtgatgcact gtatcttcag cagcagaact
     6361 acagtctgga ggcactgtcc cgtcgtgatg cccgtgagga tccgttcgcg tcgaccggga
     6421 aaacggcctt agcgcaaccg cctgacggcg catctgacgg taataaggca atcagtgaaa
     6481 cagagcatga tgcggtgaaa gcgatgttca gggggattct gaaaaaatga atgaacgtga
     6541 actgtccatt attcgtgccc tgggagaaga attcgccacg gtgctggcgg atttacagcg
     6601 cacatttgag gagaagatga gcgcgcaggc acaagcgttt gaagagaaac tggcttccct
     6661 gtccgctctg ttacagaagc atgtgacggt ggatgaggtt agccctgttc tgcaggcgat
     6721 ggtggatgac gcagtggggg ccattccgct accgcgtgat ggtcgcgatt atgatccgga
     6781 agtactgaag caggcggtga atgatgcggt cacgaaaata ccggtgccgg cagacggcaa
     6841 aagtatcacc cccgatgatg tgcgtccgat gcttgagcag atggtgaaag aggctgtaag
     6901 ccatattcct gttccgcgtg atggtcgtga ctacgatccg gaagtactga agcaggcggt
     6961 gaatgatgcg gtcgcaaata ttccgcagcc ggcggacggt aaaagtctca ccccggatga
     7021 tgtgcgtccg atgcttgaac agatggtgac ggaggctgta agccatatcc ctgttccgcg
     7081 tgatggtcgt gactacgatc cggatgttct gcagaaggcg gttctggatg cggtgagtgc
     7141 cctgccggct ccgcaggacg ggcgtgatgc cacggctctg gaaatactcc ccgccattga
     7201 cgttcaaaaa tcctttcccc ggggcacgta tgccacacac cagggcggac tctggcgggc
     7261 gtatgaaaaa acgcacggga tgcggggatg ggaatgcctg gttgacgggg tggcggatat
     7321 tgacgtcagc atgacgggtg agcggttgtt ctctgtggtg gtccggcaga gcagtggcca
     7381 gcgtacggaa aaaacatttt ccctgccggt gatgctctac cgcggtgtgt tcagagccgg
     7441 tgaaacctac caccccggcg atacggtgac gtggggggct cgctgtggca ctgcaacagt
     7501 atgaccgaag ataaacccgg agaagctcat tcatcagcct ggaccctggc tgcaaaacgt
     7561 gggcaggatg caggaggcgg aaaatgacgg cattactgac actggaagag atcaaggcac
     7621 atctgcgtgt cgaccatgac gcggatgatg acatgctgat ggacaaggtt cgtcaggcta
     7681 ccgccgtgct gctggcctac attcagggca gccgggataa agtgatccgt gaggacggtg
     7741 aactgatcca gggcgaggca ttaacccgga tgaagggggc tgccatgcga ctgaccggga
     7801 tgctgtaccg gaatccggat cttgcggagc gggaagaact gcttcagggg gagctgccgt
     7861 tttctgtttc cgtgctgatt tacgatttgc gttgtccgac ggtgttatga ggagggggaa
     7921 tggcaatatc tgcaggtcgt ctgacacaga tgataagtgt tctgaacccg gtgttaaccc
     7981 gtaacgctgc cggagaaatg acggaagaat gggtgtcatg cgggaaaatt catgcggata
     8041 tccgaggcag gagcagccgg gagcggatgc agtccggtgc ggaaatggcg caggcggaaa
     8101 tccgcatctg ggtgcgcggt cagtccggtc gggaaatcac ggcagcgtca cgacttcatg
     8161 tgctgagtgg tccatggcgt gaccggatcc tgaacgttgt cgggctgccc gtgccggatg
     8221 cgaccggcgg gcgtctggaa attctctgtc ggctgggagg ggaaaaatga tcgaaatcct
     8281 gctggatttt tcggggctgg aggacatcag ccgcgatttg cagcttctga gtggtgcgga
     8341 aaataaccgg gtgctgcgtg aggcaacccg tgcgggtgcg aatgtgctga aagaagaagt
     8401 ggtgtcacgg acaccggtac gcaggggaaa actgcgccgc aatgtggtga tcctttcccg
     8461 gcgctcccgc gatggcggga tggaatccgg tgtccatatc cgtggtgtta atccggacac
     8521 cggtaacagc gataacacca tgaaggcgga taacccgcgc aatgctttct actggcggtt
     8581 tgtggaaatg gggaccgtga atatgccacc gcacccgttt gtgcgcccgg cgtttgatgt
     8641 gcgcagtgaa caggcagctc aggtggcgat tgcgcggatg aaccgggcca ttgatgaggt
     8701 actgagacga tgacggaggc ggatttgtat cctcatctgg cgcatcttgc cggcgggcag
     8761 gtgtacccgt atgtggcccc cctgctggat ggcaggccgt cggtggcgct tccgtgggtg
     8821 gttttcagcc tgattttatc ggtgtcagcg gacgtgatgg gcgggcaggc ggagtcctca
     8881 gtgtcggtgc agatagacgt ttatgccggg actgtgacgc aggcgcgtca gatacgtcag
     8941 gacgcccgtg aagccataat gctgctggcc ccgggatccg tcagtgaaat gcaggactat
     9001 attccggaaa accgctgtta ccgtgcaacc ctggagtttc aggtcacggt gtgacttttt
     9061 ctttttttct acaaaaccat accccgccgc gtgcgggttt tttattatca ggaggcagaa
     9121 tgtctgcttt gtatgaacgc tcacagctga cgcaggtgat gatttcatct gccccggcga
     9181 ctgctgaaac tatggataag gcggaatatc tgcgcctgga ctgcaccatc aaggaagtcc
     9241 agttcaccgc cggtcagaaa caggatattg atgtgaccac gctctgctcc acagagcagg
     9301 agaacatcaa cggtctgggg gcgtcgtctg agatttccat gtcgggtaat ttttatctga
     9361 atcaggccca gaacgccctg cgtgatgcct atgacaatga cgcgttgtat gcgtttaagg
     9421 tgctgtttcc gtccggtaag ggctttaaa
//
LOCUS       DADMHC010000155         9436 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.158, whole genome shotgun sequence.
ACCESSION   DADMHC010000155 DADMHC010000000
VERSION     DADMHC010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9436
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.158"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..381
                     /gene="kgtP"
                     /locus_tag="JNZ57_003105"
     CDS             <1..381
                     /gene="kgtP"
                     /locus_tag="JNZ57_003105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate permease"
                     /protein_id="HAY8829227.1"
                     /translation="GRRTSMLCFGSLAAIFTVPILSALQNVSSPYAAFGLVMCALLIV
                     SFYTSISGILKAEMFPAQVRALGVGLSYAVANAIFGGSAEYVALSLKSIGMETAFFWY
                     VTLMAVVAFLVSLMLHRKGKGMRL"
     gene            complement(378..722)
                     /locus_tag="JNZ57_003106"
     CDS             complement(378..722)
                     /locus_tag="JNZ57_003106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708437.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfiM family lipoprotein"
                     /protein_id="HAY8829228.1"
                     /translation="MFFGGHVLRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAM
                     LSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGA
                     STGYTVWQLTRH"
     gene            complement(747..2102)
                     /gene="pssA"
                     /locus_tag="JNZ57_003107"
     CDS             complement(747..2102)
                     /gene="pssA"
                     /locus_tag="JNZ57_003107"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HAY8829229.1"
                     /translation="MLSKFKRNKHQQHLAQLPKISQSVDDVDFFYAPADFRETLLEKI
                     ASAKQRICIVALYLEQDDGGKGILNALYEAKRQRPELDVRVLVDWHRAQRGRIGAAAS
                     NTNADWYCRMAQENSGVDVPVYGVPINTREALGVLHFKGFIIDDSVLYSGASLNDIYL
                     HQHDKYRYDRYHLIRNRKMSDIMFEWVTQNIMNGRGVNRLDDVNRPKSPEIKNDIRLF
                     RQELRDAAYHFQGDADNDQLSVTPLVGLGKSSLLNKTIFHLMPCAEQKLTICTPYFNL
                     PAILVRNIIQLLREGKKVEIIVGDKTANDFYIPEDEPFKIIGALPYLYEINLRLFLSR
                     LQYYVNTDQLVVRLWKDDDNTYHLKGMWVDDKWMLITGNNLNPRAWRLDLENAILIHD
                     PQLELAPQREKELELIREHTTIVKHYRDLQSIADYPVKVRKLIRRLRRIRIDRLISRI
                     L"
     gene            complement(2216..4876)
                     /gene="pat"
                     /locus_tag="JNZ57_003108"
     CDS             complement(2216..4876)
                     /gene="pat"
                     /locus_tag="JNZ57_003108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein lysine acetyltransferase"
                     /protein_id="HAY8829230.1"
                     /translation="MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPV
                     LPVTPAWKAVLGVLAWPDIASLPFTPDLAVLCTNASRNLALLEELGEKGCKTCIILSA
                     PASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVS
                     NTILDWAQQRKMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFV
                     SAARSASRNKPILVIKSGRSPAAQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSA
                     VETLSHMRPLRGDRLMIISNGAAPAALALDALWSRNGKLATLSEETCQKLRDALPEHV
                     AISNPLDLRDDASSEHYIKTLDILLHSQDFDALMVIHSPSAAAPATESAQVLIEAVKH
                     HPRSKYVSLLTNWCGEHSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLR
                     ETPALPSNLTSNTAEAHLLLQQAIAEGATSLDTHEVQPILQAYGMNTLPTWIASDSTE
                     AVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA
                     RIHGLLVQSMANRAGAQELRVVVGHDPVFGPLIMLGEGGVEWRPEDQAVVALPPLNMN
                     LARYLVIQGIKSKKIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASG
                     SEFTALDVTLDISPFEGDNESRLAVRPYPHQLEEWVELKNGERCLFRPILPEDEPQLQ
                     QFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRIDQTEEILGVTR
                     AISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGLQRLNGITMPNNRGMVA
                     LARKLGFNVDIQLEEGIVGLTLNLAQREES"
     gene            complement(4908..5606)
                     /locus_tag="JNZ57_003109"
     CDS             complement(4908..5606)
                     /locus_tag="JNZ57_003109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311476.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DTW domain-containing protein"
                     /protein_id="HAY8829231.1"
                     /translation="MTENAVLQLRTERIARATRPFLARGNRVRRCQRCLLPEKLCLCS
                     TITPAQAKSRFCLLMFDTEPMKPSNTGRLIADILPDTVAFQWSRTEPSQDLLDLVQNP
                     DYQPMVVFPASYADEQREVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVIS
                     VDLSRLSAYRLREAQAEGQYCTAEVAIALLDMAGDTGAAAGLGEHFTRFKTRYLAGKT
                     QHLGSITAEQLESV"
     gene            complement(5675..6094)
                     /gene="trxC"
                     /locus_tag="JNZ57_003110"
     CDS             complement(5675..6094)
                     /gene="trxC"
                     /locus_tag="JNZ57_003110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxC"
                     /protein_id="HAY8829232.1"
                     /translation="MNTVCTHCQAINRIPDDRIEDAAKCGRCGHDLFDGEVINATGET
                     LDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRF
                     GIRSIPTIMIFKNGQVVDMLNGAVPKAPFDSWLNESL"
     gene            6301..7338
                     /locus_tag="JNZ57_003111"
     CDS             6301..7338
                     /locus_tag="JNZ57_003111"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA/rRNA methyltransferase"
                     /protein_id="HAY8829233.1"
                     /translation="MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRA
                     DGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRR
                     QRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEA
                     ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSC
                     AHFGVKGVVVQDAALLESGAAIRTAEGSAEHVQPITGDNIVNVLDDFRQAGYTVVTTS
                     SEQGKPLFKTSLPAKMVLVLGQEYEGLPDTARDPNDLRVKIDGTGNVAGLNISVATGV
                     LLGEWWRQNKA"
     gene            complement(7386..8075)
                     /gene="ung"
                     /locus_tag="JNZ57_003112"
     CDS             complement(7386..8075)
                     /gene="ung"
                     /locus_tag="JNZ57_003112"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HAY8829234.1"
                     /translation="MANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDV
                     FNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPG
                     FTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVV
                     FLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGETPI
                     DWMPVLPAESE"
     gene            8381..8764
                     /gene="grcA"
                     /locus_tag="JNZ57_003113"
     CDS             8381..8764
                     /gene="grcA"
                     /locus_tag="JNZ57_003113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autonomous glycyl radical cofactor GrcA"
                     /protein_id="HAY8829235.1"
                     /translation="MITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKAGYAEDEVV
                     AVSKLGDIEYREVPVEVKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSG
                     YAVRFNSLTPEQQRDVIARTFTESL"
     gene            complement(8820..9407)
                     /gene="eamB"
                     /locus_tag="JNZ57_003114"
     CDS             complement(8820..9407)
                     /gene="eamB"
                     /locus_tag="JNZ57_003114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/O-acetylserine transporter"
                     /protein_id="HAY8829236.1"
                     /translation="MTPTLLSAFWTYTLITAMTPGPNNILALSSATSHGFRQSTRVLA
                     GMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQA
                     KPISFWASFALQFVNVKIILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCW
                     ALAGHLFQRLFRQYGRQLNIVLALLLVYCAVRIFY"
BASE COUNT         2351 a         2423 c         2448 g         2214 t
ORIGIN      
        1 ggtcgccgta cctcaatgtt atgtttcggt tcgctggcag ccatttttac cgttcctatt
       61 ctctcagcat tgcaaaacgt ttcctcgcct tatgccgctt ttggtctggt gatgtgtgcc
      121 ctgctgatag tgagttttta tacatcaatc agtggaatac tgaaggctga gatgttcccg
      181 gcacaggttc gcgcattagg cgttggtctg tcatatgcgg tcgctaatgc tatatttggt
      241 ggttcggcgg agtacgtagc gttgtcgctg aaatcaatag gaatggaaac tgccttcttc
      301 tggtatgtga ccttgatggc cgtggtggcg tttctggttt ctttgatgct acatcgcaaa
      361 gggaagggga tgcgtcttta gtgacgggtc agttgccaga cggtatagcc ggtgcttgca
      421 ccggcgacat cccaggccaa atccttccag ctccagccgc tcccttcggg gcggctatcc
      481 caaagctctt ttgacgcccc caaactgaca gagaacatca atccaaacat ggcactgcga
      541 tcccggctca tcccctgatg ctgtgaatat tcatttccgg cggcggaaag catcgccgag
      601 gcgataaagt gttgagcttt atcctgcccg ctccagctat cgttagccat atggctgcat
      661 ccagaaagta acaatagcga acagacaaaa agaatacgca aaacgtggcc tccaaaaaac
      721 aaaccccgta caggacgggg ttgtgattac aggatgcggc taattaatcg gtcgatgcgg
      781 atacggcgca aacggcggat gagtttacga accttcaccg gataatcggc aatactttgc
      841 agatcgcgat agtgcttaac gatggtggta tgctcgcgga tcagctccag ttctttctct
      901 cgctgcggcg caagctccag ttgtggatcg tggatcaaaa tggcgttttc cagatccaga
      961 cgccaggcgc gcgggttcag gttattaccg gtgatcaaca tccacttatc atcaacccac
     1021 atccctttca ggtgataggt gttgtcgtca tctttccata accgaaccac tagctggtca
     1081 gtattgacgt aatactgcaa acggctcagg aaaagacgca gattgatctc atagagataa
     1141 ggcaatgcgc caattatctt gaaaggttca tcttccggaa tgtagaagtc gttcgcggtt
     1201 ttatcaccaa caataatttc gacctttttc ccttcgcgca gcaactggat aatattgcgc
     1261 acaaggattg ctggcaggtt gaagtatggc gtacagatgg ttagtttctg ctcggcacaa
     1321 ggcataagat ggaaaatggt cttgttcaac agactcgatt tccccagccc cactagcggc
     1381 gttacggaaa gctgatcgtt gtcggcatcg ccctggaaat gataagcggc atcacgcagc
     1441 tcctggcgga acagacgaat atcgttcttg atttccgggc tttttggccg attaacatca
     1501 tccagacgat taacgccgcg gccattcata atattctgtg taacccattc aaacataatg
     1561 tctgacatct tacggttacg gataagatga taacggtcgt agcgatattt atcgtgctga
     1621 tgcaggtaaa tatcgttcag gctggcaccg ctataaagta cgctatcgtc gatgataaag
     1681 cctttaaagt gcagaacacc aagggcttca cgggtattga ttggaacgcc ataaaccgga
     1741 acatctacgc ccgaattttc ctgcgccatg cggcagtacc agtcagcgtt agtgttagat
     1801 gccgcagcgc caatgcgtcc acgttgtgca cgatgccagt cgaccagcac ccgcacatcc
     1861 agttccggac gctgcctttt agcttcatac aacgcgttca gaatgccttt gccaccgtca
     1921 tcctgttcga gatacagggc gacaatgcaa atgcgctgct tcgcgctggc tattttttcc
     1981 agcagcgtct cccggaagtc ggcgggagcg taaaagaaat cgacatcatc aactgattga
     2041 gaaatcttgg gtagttgggc aaggtgttgt tgatgtttat tacgcttaaa ttttgacaac
     2101 atcacagtgc atttcttctc tgttcattga agggtcctct gtgcaatgca gacgacataa
     2161 gcgggcaata ataacaccag tcccgattaa gtggtcaaca tttccagtac cttactcatg
     2221 attcctcgcg ttgggcaaga tttagcgtaa gcccaacgat cccctcttcg agctggatat
     2281 caacgttaaa cccgagcttg cgggctagcg ccaccatgcc acgattgttt ggcatcgtaa
     2341 taccattcag acgttgtagt ccgtgatctc gcgtataggt aatcaacttt tccattaagc
     2401 gtcgacctaa gcctaaccct ttgagatccg agcgaaccag cacagcaaat tcggcatcga
     2461 tgttatcagg atcggaaatc gcacgcgtga cgccgaggat ctcttccgtt tgatcaatac
     2521 gtcgtaccgc tacaaacgcc atttcccgat cgtagtcgat ctgtgtcatg ttggctaaat
     2581 cttcatgggt aaattcgttg atctcgctaa agtagcggta ataaagatct tctttggtga
     2641 ctcgcgaaat gaattgctga agttgtggct catcttctgg caaaatcggg cggaacaagc
     2701 agcgttcacc gtttttcaat tctacccatt cttccagctg atgcggataa gggcgcactg
     2761 ccagccgact ctcgttatcg ccttcaaacg gcgagatatc cagcgtgaca tccagcgcgg
     2821 taaattcact gccagaagcc agcaaaggat gaatatccag acgctgaatt tccgggcaat
     2881 cgacaatcaa gttggaaacc tgcaccagaa gctggctcaa gcctgcaaca tccaatgggc
     2941 gtagcgcact gcgcgcacga atctttttac ttttgatccc ctgaataacc agatagcggg
     3001 ccaggttcat gttcagcggc ggcagtgcga cgacggcttg atcttcagga cgccactcca
     3061 caccgccttc acccagcatg atcaacggcc cgaaaaccgg atcgtgccca accacaaccc
     3121 gcaactcctg agcgccagca cggttagcca tactttgcac caacaggccg tggatccgcg
     3181 cctgcggcca ggccattttt acgcgatcga aaatggcgtt tgccgcttgc tggacttcat
     3241 tggctgtacg caagtacagc atgacgccct gaacttccga tttatgtgga atatccggcg
     3301 aacgcaattt cagcgccacc ggataaccaa tctgttcggc aatatgcacc gcttcggtgc
     3361 tatcgctggc aatccaggta gggagcgtgt tcatgccata cgcttgcagg atgggctgaa
     3421 cttcatgggt atcgagcgac gtagcccctt cggcaatcgc ctgttgcaac agaagatgcg
     3481 cttctgcggt attggaagtc agattgctgg gcaacgccgg cgtttcgcgt agttgcttct
     3541 gattacgccg gtactccacc atatgcataa aagcagtgat ggttccttcc ggggtacggt
     3601 aggtcggcag cccggcttcg ctgaataaac gtcgtgcctc ttgcgaggag tgctcgccgc
     3661 accagttcgt cagcaaagag acatatttgc tgcggggatg atgctttacc gcttcaatta
     3721 atacttgcgc gctttctgtt gcgggagcag cggcgctggg cgaatgaata accatcagcg
     3781 cgtcaaaatc ctggctgtgg agcagaatat ccagcgtttt aatatagtgc tcactgctgg
     3841 cgtcatcgcg tagatcgagc gggttagata ttgccacatg ttctggcagt gcatcgcgca
     3901 gtttctggca ggtttcttcg cttagcgttg ccagcttgcc attgcgtgac cataaggcat
     3961 ccagcgccag cgcggcaggc gcagcaccgt tgctgataat catcagccgg tcgccacgta
     4021 gcgggcgcat atggctaagg gtttccaccg ccgaaaacag ctcgtgggtg tcctgtaccc
     4081 gcaacaaacc ggcacgctga atagccgcat cccatgccgg gtccattcct gccgtggtgt
     4141 tgagcagtcg ctgtgccgcc gggctacgtc cgcttttaat caccagaatc ggtttattac
     4201 gcgaggcact acgggccgcc gaaacaaagc gtcgcgcgtc gcttaactgt tcgagataga
     4261 gcaggatggc gctggtttta ctgtcgcgtg ccagatagtc aagcaattca tcaacgtcga
     4321 tatccaggct gtcgccgagc gcaataaagt aggaaaagcc catcttacgc tgttgcgccc
     4381 agtcgaggat ggtgttggag acggcagccg attgcgaaat aaacgccagc ttgccgcgtt
     4441 taatcggcac aggcgaaaag ctggcattca gaccttgcca gggagccagt aaacccagac
     4501 tgtttggtcc aagcaggcgc atgttatggc gcagggcgca ggcgcggaga tcttcgtgtt
     4561 gcgatgccgg ggcggaaaga ataatgcagg ttttacagcc tttctcgccg agctcttcca
     4621 gaagagcaag attacggctg gcattggtac ataaaaccgc aaggtcgggt gtaaagggca
     4681 agctggcaat atccggccag gccaacacac ccaacaccgc tttccaggct ggcgtcaccg
     4741 ggagtaccgg tccgttaaag cctcccgcca gcaggttacg catcatcagg taacctgcgc
     4801 gattgggttt catcgacgcg ccaattaccg ctatcgattt tggtcgcagt agtgcttcca
     4861 gtcctcgctg actcataccg gtctcccgca gaagtgaccg aatgatttta aacgctttct
     4921 aactgttctg ctgtgatgct acccagatgt tgcgtttttc ctgccagata gcgtgtttta
     4981 aagcgggtaa aatgctcgcc taaccctgct gccgccccgg tatcgccggc catatctaac
     5041 agtgcgatgg ctacctcggc agtacaatat tggccttcag cctgggcttc acgcaggcga
     5101 taggcagaaa gccgggaaag atcgacggaa atgacgggaa gattatccag atacggactt
     5161 ttacgaaaca tcttgcgagc ttccggccag gtaccatcga gcatgataaa cagcggtggc
     5221 ttaccggcag gtggtgtgaa gatcacttcc cgttgctcat cagcatacga ggcgggaaag
     5281 accaccattg gctgataatc cgggttttgt accagatcca gcaaatcctg cgagggttcg
     5341 gtacgcgacc attgaaacgc aacggtatca ggcaaaatat cagcaatcag acgcccggta
     5401 ttactgggct tcattggctc ggtgtcgaac atcagcaaac agaagcgact ttttgcttgt
     5461 gctggggtaa ttgtcgaaca gagacataat ttctctggca aaagacagcg ttggcagcga
     5521 cgaacgcgat taccgcgggc aagaaaagga cgtgttgcgc gcgcaatacg ctcggtgcgt
     5581 aactggagaa cagcgttttc ggtcataaga gagcgtcgaa aaaacgccat tgtcgcagag
     5641 gagaaaacgg ggcacaagat gcgccccggt aagattaaag agattcgttc agccagctat
     5701 cgaacggagc tttcggtact gcgccattaa gcatgtcgac aacctgaccg tttttgaaaa
     5761 tcatgatcgt cggtatacta cgaattccaa agcgactgct caattcacgt tcagcttcgg
     5821 tattcacttt cacaaagcgc actttaccgc tacgctcttg cgcgacatct tcaaaaattg
     5881 gtgcgaaatt acggcagggg ccgcaccacg gtgcccagaa gtcgatcacc acaggtagat
     5941 catccttcag caatttgtcg agtgtttcac cggtcgcatt aatcacctct ccgtcaaaca
     6001 agtcgtgacc gcagcgtccg cattttgccg catcttcgat ccgatcgtcg ggaatgcgat
     6061 tgatggcctg acaatgggta caaacggtat tcataactaa cctcgggatg agtaaggaga
     6121 cttatcggca acgacgccgg tatgtttcta atatgttaca tattatcggg gacattgttc
     6181 cagacaacaa tctgttttat tcaataggta tgatagtcgc aggctttggt acgaaatcat
     6241 ggcgaaccgc gcggacttcg ggtaatctgc gcgcttcgcg cagcgctggt ggagaaaagc
     6301 atgaacgatg aaatgaaagg taaaagcggc aaggtcaaag tgatgtatgt ccgcagtgat
     6361 gatgattctg ataaacgtac ccacaacccg cgtaccggga aagggggcgg gcgtccagga
     6421 aaatctcgtg ctgacggtgg ccgtcgcccc gcccgcgatg acaaacagag tcagccccgt
     6481 gaccgcaagt gggaagattc gccgtggcgc acggtttccc gcgcgccggg tgatgagacg
     6541 ccggaaaagg ccgatcacgg tggcatcagt ggtaaaagtt ttattgatcc ggaagtgttg
     6601 cgtcgtcagc gtgcggaaga aacccgcgtc tacggcgaaa acgcctgtca ggcactgttc
     6661 cagagccgtc cggaagcaat tgttcgcgcc tggtttatcc agagcgtaac gccacgtttt
     6721 aaagaagcct tgcgctggat ggcggcaaac cgcaaagcgt accatgtggt ggatgaagct
     6781 gaattgacaa aagcgtcagg cacggaacat cacggcggcg tttgcttcct gatcaaaaag
     6841 cgtaacggta caaccgtgca gcagtgggta agccaggcag gcgcgcagga ttgcgttctg
     6901 gcactggaaa acgaatctaa cccgcataac ctgggtggca tgatgcgcag ctgcgcgcac
     6961 ttcggcgtga aaggtgtcgt ggtgcaggat gcggcactgc tggagtcggg ggcggctatc
     7021 cgtaccgcag aaggcagcgc agagcacgtt cagccgatta ctggcgacaa cattgttaac
     7081 gtgctggatg atttccgtca ggcaggttac accgtagtga ccacttccag cgagcagggt
     7141 aaaccgctgt tcaaaactag tctgccagcg aaaatggtac tggtgctggg tcaggaatat
     7201 gaagggttac cggataccgc acgcgatccg aacgatctgc gcgtgaagat tgacggtacg
     7261 ggcaacgttg ccgggctgaa tatctctgtc gcaaccggcg ttttgcttgg tgaatggtgg
     7321 cgtcagaata aagcctgata aatcagccgg gtggcaactc tgccatccgg catttccccg
     7381 caaatttact cactctctgc cggtaatact ggcatccagt caatcggcgt ctcgccacgt
     7441 tgttccagcc actgatttgc cagcacaaaa tggttgcagc caaagaatcc acgatgcgcc
     7501 gaaagcggcg acggatgcgg tgctttcagt acatgatggc gttgcttatc tataatcgcc
     7561 cctttctttt gcgcatgtga tccccacaac aaaaacacca cgccttcgcg gtgctggtta
     7621 atcaggctga tgactttatc agtaaacgtc tcccaaccga ggctggcgtg ggaatgcgcc
     7681 tgacctgcgc gaaccgtcaa cacagtattg agcaggagaa cgccctgacg cgcccagctt
     7741 tcgagatagc catgattagg gcgggtgaag cccggaatag tattttccag ctctttatac
     7801 atattcaata atgacggagg aatggcaatg ccgggacgaa cggaaaatgc cagaccatgc
     7861 gcctgtcccg gtccgtgata aggatcctgg ccgagaatca ccactttaac gtcacccaac
     7921 tcggtaaagc ggaacgcgtt aaagacatct ttttgtggtg gatagatagt gacgccggac
     7981 tgccgctcgc tggcgacggt ctgaagggta ttaagaaaat aaggttgttg cttctcttca
     8041 gccagcacgt catgccaggt taattcgtta gccatctcgc tctcctgcga atcttcaatc
     8101 cgcctagctt aactgcttct ttctacagaa caaaatcatg ctcatttttt atgacttaaa
     8161 cgagtgcaaa aaaatgtaaa ttggtaaaat ttcacacccg cataagttga tgtaaaacaa
     8221 taaaatccat ttacgaccac aatcgatgtg tggtttttat tgatttaaat caaagaatca
     8281 agggtggttg aggagtatat atacactcaa gcaacaatgg ttttaccaat tggccgcgac
     8341 aggctgaaca aatcaaataa ttttgccggg gaggcatcac atgattacag gtatccagat
     8401 tactaaagcc gctaacgacg atctgctgaa ctctttctgg ctgctggaca gcgaaaaagg
     8461 cgaagcacgt tgcatcgttg caaaagcagg ttatgcagaa gatgaagtgg ttgcagtaag
     8521 caaactgggt gacattgaat accgtgaagt tccagtagaa gtgaaaccag aagttcgcgt
     8581 tgaaggtggt caacacctga acgttaacgt tctgcgtcgt gaaactctgg aagatgcagt
     8641 taagcatccg gaaaaatatc cgcagctgac catccgtgta tccggttatg cagttcgctt
     8701 taactctctg actccggaac agcagcgcga cgttatcgct cgtaccttta ctgaaagcct
     8761 gtaaggctta agtagcaagt tactaagcgg aagagggcga cctcttccgc tttttttcgt
     8821 taatagaaaa tgcgtaccgc gcaatagacc agcaacaggg caagcacgat atttaactgg
     8881 cgaccatact ggcgaaacaa tcgctgaaac agatgccccg ccagcgccca gcacacattg
     8941 ccaaacgtcc caatcatcgc cagcaaaacg ctgacgccaa ctacccagct tagcgcctgt
     9001 gtttgcggca gaacaaacgt cgacagtgcc gtaacaccgt acaaaatgat tttgacgttc
     9061 acaaactgca aagcaaagct ggcccaaaag ctgattggtt ttgcctgaag tccgtcttcc
     9121 tttgttgggc tggtggcgat tttccacgcc agccagacaa tatatgccgc ccccgcccaa
     9181 ctcaaaaggt gtaccgctgc cgggtcaatc actgccagtg aaaatgaaat gcccgcacac
     9241 agtaacatca caatcaaaaa tcccagactc atccctgcca gcacgcgggt actttgacga
     9301 aatccatgcg acgtagcaga gctaagggcg agaatattgt tcggtcctgg cgtcatagcg
     9361 gtaatcaggg tgtaagtcca aaaagcactt aaaagggtcg gtgtcacttg ttatctcctc
     9421 tgttttggta gacagt
//
LOCUS       DADMHC010000156         9359 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.159, whole genome shotgun sequence.
ACCESSION   DADMHC010000156 DADMHC010000000
VERSION     DADMHC010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9359
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.159"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            126..455
                     /locus_tag="JNZ57_003115"
     CDS             126..455
                     /locus_tag="JNZ57_003115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311560.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF883 domain-containing protein"
                     /protein_id="HAY8829237.1"
                     /translation="MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAE
                     AARSKAQALLKETRARMHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGA
                     LLSMRKS"
     gene            702..947
                     /gene="nrdH"
                     /locus_tag="JNZ57_003116"
     CDS             702..947
                     /gene="nrdH"
                     /locus_tag="JNZ57_003116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-like protein NrdH"
                     /protein_id="HAY8829238.1"
                     /translation="MRITIYTRNDCVQCHATKRAMENRGFDFEMINVDRVPEAAEALR
                     AQGFRQLPVVIAGDLSWSGFRPDMINRLHPAPHAASA"
     gene            944..1354
                     /gene="nrdI"
                     /locus_tag="JNZ57_003117"
     CDS             944..1354
                     /gene="nrdI"
                     /locus_tag="JNZ57_003117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class Ib ribonucleoside-diphosphate reductase
                     assembly flavoprotein NrdI"
                     /protein_id="HAY8829239.1"
                     /translation="MSQLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYIL
                     IVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCG
                     VPWLYRFELMGTQSDIENVRKGVTEFWQRQPQNA"
     gene            1327..3471
                     /gene="nrdE"
                     /locus_tag="JNZ57_003118"
     CDS             1327..3471
                     /gene="nrdE"
                     /locus_tag="JNZ57_003118"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HAY8829240.1"
                     /translation="MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAF
                     MATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFAHAHTSGFRFQTF
                     LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDATLALQLTDEMLSGRFQPA
                     TPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG
                     APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN
                     ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADIAISEHYDEL
                     VADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPVAGRINMSNLCSEIL
                     QVNCASEYDENLDYARTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSH
                     IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRT
                     SMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFARSGITLPTREMW
                     AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPA
                     PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY
                     AWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL"
     gene            3481..4440
                     /locus_tag="JNZ57_003119"
     CDS             3481..4440
                     /locus_tag="JNZ57_003119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase 2 subunit
                     beta"
                     /protein_id="HAY8829241.1"
                     /translation="MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPA
                     WQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHA
                     RSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESF
                     LFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREEL
                     KSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMA
                     EVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWNF"
     gene            4795..5997
                     /locus_tag="JNZ57_003120"
     CDS             4795..5997
                     /locus_tag="JNZ57_003120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline/glycine betaine ABC transporter
                     ATP-binding protein ProV"
                     /protein_id="HAY8829242.1"
                     /translation="MAIKLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGV
                     KDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELRE
                     VRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHS
                     YPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTI
                     VFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSA
                     KDIARRTPNGLIRKTPGFGPRSALKLLQDEDREYGYVIERGNKFVGAVSIDSLKTALT
                     QQQGLDAALIDAPLAVDAQTPLSELLSHVGQAPCAVPVVDEDQQYVGIISKGMLLRAL
                     DREGVNNG"
     gene            5990..7054
                     /gene="proW"
                     /locus_tag="JNZ57_003121"
     CDS             5990..7054
                     /gene="proW"
                     /locus_tag="JNZ57_003121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     permease ProW"
                     /protein_id="HAY8829243.1"
                     /translation="MADQNNPWDTTPAADSAVQSADAWGTPATAPTDGGGADWLTSTP
                     APNVEHFNILDPFHKTLIPLDSWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQLLL
                     GMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI
                     VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFA
                     LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLAL
                     SMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSRSR
                     GNRRWYTTGPVGLLTRPFIK"
     gene            7112..8104
                     /gene="proX"
                     /locus_tag="JNZ57_003122"
     CDS             7112..8104
                     /gene="proX"
                     /locus_tag="JNZ57_003122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708493.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     substrate-binding protein ProX"
                     /protein_id="HAY8829244.1"
                     /translation="MRHSVLFATAFATLISTQTFAADLPGKGITVNPVQSTITEETFQ
                     TLLVSRALEKLGYTVNKPSEVDYNVGYTSLASGDATFTAVNWTPLHDNMYEAAGGDKK
                     FYREGVFVNGAAQGYLIDKKTADQYKITNIAQLKDPKIAKLFDTNGDGKADLTGCNPG
                     WGCEGAINHQLAAYELTNTVTHNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNEL
                     KPGKDVVWLQVPFSALPGDKNADTKLPNGANYGFPVSTMHIVANKAWTEKNPAAAKLF
                     AIMQLPVADINAQNAIMHDGKASEGDIQGHVDGWIKAHQQQFDGWVNEALAAQK"
     gene            8396..>9359
                     /locus_tag="JNZ57_003123"
     CDS             8396..>9359
                     /locus_tag="JNZ57_003123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8829245.1"
                     /translation="MTKPNHELSPALIVLMSIATGLAVASNYYAQPLLDTIARNFSLS
                     ASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRRLIVSMTLLAAGGMLITASSQSLAMM
                     ILGTALTGLFSVVAQILVPLAATLASPDKRGKVVGTIMSGLLLGILLARTVAGLLANL
                     GGWRTVFWVASVLMALMALALWRGLPQMKSETHLNYPQLLGSVFSMFISDKILRTRAL
                     LGCLTFANFSILWTSMAFLLAAPPFNYSDGVIGLFGLAGAAGALGARPAGGFADKGKS
                     HHTTTFGLLLLLLSWLAIWFGHTSVLALIIGILVLDLTVQGVHIT"
BASE COUNT         2217 a         2413 c         2416 g         2313 t
ORIGIN      
        1 gggcctgcct tacctgattg cgcattcaca acgctttcag aaaagtccat aaagccgcga
       61 tgaacctcag ttaagaaaat tatggtctac actgaaaatt acatcgaatt ctaatggggg
      121 atcatatgtt taaccgaccg aaccgcaacg acgttgatga tggcgtgcag gatatccaga
      181 atgatgtcaa tcaattagct gacagcctcg aatctgtatt gaagtcctgg ggcagcgacg
      241 ccaaagggga agctgaagcc gcacgcagta aagctcaggc gttgctgaaa gaaaccaggg
      301 cgcgaatgca tggtcgtact cgcgtccagc aagccgcgcg cgatgccgtt ggctgcgcgg
      361 attcttttgt tcgtgaaaga ccctggtgta gcgtgggtac agcagctgcg gtaggtattt
      421 ttatcggcgc actgttaagc atgcgcaaat cgtagtgcaa aaatgataat aaatacgcgt
      481 ctttgacccc gaagcctgtc ttcggggttt ctttttgcct ggtgaatcac aaaatccccc
      541 tcccccgtca cgctcatatc cagggtaatt tcgatcacta tttgctatat attgtgtagt
      601 tgaaactttt ttcaactaca tctagtatct ctgtatcaac agagagacaa cccgacgcgt
      661 atcatcgcgc cgtatcttca ttttaaacgg aaatacgaat catgcgcata actatttata
      721 ctcgtaacga ttgcgttcag tgccacgcca ccaaacgggc gatggaaaac cgggggtttg
      781 attttgaaat gattaatgtc gatcgcgttc ctgaagcagc ggaagcgttg cgtgctcagg
      841 gctttcgtca gttgccggta gtgattgctg gcgatcttag ctggtctggt ttccgtccgg
      901 acatgattaa ccgtctgcat ccagcgccac acgcggccag tgcatgagcc agctcgtcta
      961 cttctccagc agctccgaaa acacgcagcg ttttatcgaa cgtttaggtc tgcccgcggt
     1021 gcgcatcccg ctcaatgaac gggaacggat tcaggtagac gagccttaca tcctgatcgt
     1081 gccctcttac ggcggcggcg gtacggctgg cgcggtgcca cgacaggtaa ttcgcttttt
     1141 aaacgacgag cacaaccggg cgttgcttcg cggcgttatt gcttctggta atcgcaactt
     1201 tggtgaggcg tatggccgcg ccggagatgt gattgcccgg aaatgcggcg tgccgtggct
     1261 gtaccgtttt gaactcatgg gtacgcaaag cgatatcgaa aacgttcgta aaggagtaac
     1321 cgaattttgg caacgacaac cgcagaatgc ctgacgcagg aaacgatgga ttaccacgcg
     1381 ctgaatgcga tgcttaacct ctacgatagc gcaggtcgca ttcagttcga taaagaccgc
     1441 caggccgttg acgcctttat ggcgacgcat gtgcgtccga acagtgtgac cttcagtagc
     1501 cagcagcagc gcctgaactg gctggtcaac gaaggttact atgatgaaag cgttcttaat
     1561 cgctactctc gcgactttgt cattacgctg tttgcccacg cacacaccag cggttttcgt
     1621 ttccagacat tcctcggggc atggaagttt tacaccagct atacgttgaa gacattcgac
     1681 ggtaaacgtt atctggaaga ttttgccgat cgagtcacga tggtggcgct gacgctggca
     1741 caaggcgatg cgacgctggc gttgcaactg accgatgaaa tgctgtcagg acgctttcag
     1801 ccagccacgc cgacattcct caactgcggt aagcagcagc gcggcgaact ggtttcctgt
     1861 tttctgctgc gtattgaaga caatatggag tcgattggcc gggcggtaaa ttccgcactg
     1921 caactgtcga aacgcggcgg cggcgtggca tttttgctgt cgaatctgcg agaagcgggc
     1981 gcgccaatta aacgtattga aaatcaatct tctggcgtaa ttccggtgat gaaaatgctg
     2041 gaagacgcat tttcctatgc caaccaactc ggcgcgcgtc agggggcagg tgcagtctat
     2101 ttacatgctc atcatcccga tattctgcgt tttctcgata caaaacggga aaatgccgac
     2161 gaaaaaatcc gcattaaaac actgtcgctg ggcgtggtga tcccggatat cactttccat
     2221 ctggcaaaag agaatgcgca gatggcgctg ttttcgccct atgacgttga gcgagtttat
     2281 ggcaagccgt ttgccgatat cgccatcagc gaacactatg acgaactggt tgccgatgaa
     2341 cgcatccgca aaaaatacct caacgcccgt gatttcttcc agcggctggc agaaatccag
     2401 tttgagtccg gctatcccta catcatgtat gaagacacgg taaaccgtgc taaccctgtc
     2461 gccgggcgca taaatatgag taatctctgc tcagagattt tgcaggtcaa ctgtgcctca
     2521 gagtatgacg agaatctcga ctatgcccgc acaggccatg atatctcctg caatttaggt
     2581 tcgttgaata ttgcgcacac catggattcc cccgattttg cccgcacggt agagactgcc
     2641 gtgcgcggtt taacggcggt gtcagatatg agtcatatcc gcagcgtgcc gtccatcgaa
     2701 gccggaaatg ccgcctcaca cgccatcgga ctggggcaga tgaatttaca cggctatctg
     2761 gcgcgagaag gcatcgctta tggttcgccg gaagcactgg atttcaccaa tctctatttc
     2821 tatgccatca cctggcacgc actgcgtacc tcgatgttgc tggcgcgcga acgcggtgaa
     2881 accttcgccg ggttcaaaca gtcacgttat gccagtggtg aatattttag ccaatatctg
     2941 caaggtaact ggcagccgaa aacggcgaaa gttggcgaac tgtttgcccg cagcggtatt
     3001 acgttaccta cccgtgagat gtgggcgcaa ctgcgcgacg acgtgatgcg ctacggcatt
     3061 tataaccaga atcttcaggc ggtgccgcca accggttcta tctcttatat caaccatgct
     3121 acgtcgagta ttcatccgat tgtggcgaaa gtagagatac gcaaagaggg caaaacagga
     3181 cgcgtttact accctgcccc gtttatgact aacgagaatc tggcgctgta tcaggatgct
     3241 tacgaaatcg gcgcagaaaa gatcatcgac acctacgccg aagcgactcg ccatgtcgat
     3301 caggggctgt cgctgacgct gtttttcccc gataccgcca ccactcgcga tatcaacaaa
     3361 gcgcagattt acgcctggcg caagggtatc aaaacgctct attacattcg cctgcgtcag
     3421 atggcgctgg aaggcactga aattgaaggc tgcgtctcct gtgcacttta aggaatatct
     3481 atgaaactct cacgtatcag cgccatcaac tggaacaaga tatctgacga taaagatctg
     3541 gaggtgtgga atcgcctgac cagcaatttc tggctaccag aaaaggtgcc gctgtcgaac
     3601 gatattcctg cttggcagac attaactgtc gtagaacaac aactgacgat gcgcgttttt
     3661 actggcctga cgctgctcga cacgctgcaa aatgttatcg gcgcgccttc gctgatgccc
     3721 gatgcactca cgcctcatga agaagcggta ttatcgaata tcagctttat ggaagcggtt
     3781 catgcccgct cttacagttc gattttctcg acgctgtgtc agaccaaaga tgtcgatgcc
     3841 gcctacgcct ggagtgaaga aaacgcaccg ttgcagcgaa aagctcagat tattcagcaa
     3901 cattatcgcg gtgatgatcc gctgaaaaag aaaatcgcca gtgtgtttct tgaatctttt
     3961 ttgttctatt ccggtttctg gctgccgatg tatttttcca gccgcggaaa gctgaccaat
     4021 accgcagatc tgatccgtct gattatccgc gatgaagcag tccacggtta ctacataggc
     4081 tataaatatc agaaaaacat ggaaaagata tctctgggac aacgtgaaga gttgaagagt
     4141 ttcgccttcg atttgttgct ggaactctac gacaacgagt tgcaatacac cgatgagctg
     4201 tacgccgaaa ccccgtgggc tgacgatgtg aaagcgtttc tctgttacaa cgccaataag
     4261 gctttgatga atctgggcta cgaaccgtta tttcccgcag aaatggcgga agtgaatccg
     4321 gcaatcctcg ccgcgctttc gccgaatgcc gatgaaaatc acgatttctt ttccggttca
     4381 ggctcctctt atgtgatggg gaaagcggtt gaaacagaag atgaagactg gaatttctga
     4441 gggtgttatt ttcaaaaata tcactacccg cagcagggaa ataattcccg ccaaatagct
     4501 ttttatcacg caaatattct gtagtgatct acactgagac tctgttgcat tattcgcctg
     4561 aaactacaat attcaggcgt tttttcgcta tctatgacaa aaaatatcaa cttttctcga
     4621 tttgctctca gcccttatat cacgggaaat tccggcgatt tgctcgcatc aatattcatg
     4681 ccacatttgc cctcaggggt tgcctcagat tctcagtatg ttagggtaga aaaaagtgac
     4741 tatttccatt gggtaatata tcgacataaa caaataaagg aatctttcta ttgcatggca
     4801 attaaattag aaattaaaaa tctttataaa atatttggcg agcatccaca gcgagcgttc
     4861 aaatatatcg aacaaggact ttcgaaagaa caaattctgg aaaaaactgg gctatcgctt
     4921 ggcgtaaaag acgccagtct ggccattgaa gaaggcgaga tatttgtcat catgggatta
     4981 tccggctcgg gtaaatccac aatggtacgc cttctcaatc gcctgattga acccacccgc
     5041 gggcaagtgc tgattgatgg tgtggatatt gccaaaatat ccgatgccga actccgtgag
     5101 gtgcgcagaa aaaagattgc gatggtcttc cagtcctttg ccttaatgcc gcatatgacc
     5161 gtgctggaca atactgcgtt cggtatggaa ttggccggaa ttaatgccga agaacgccgg
     5221 gaaaaagccc ttgatgcact gcgtcaggtc gggctggaaa attatgccca cagctacccg
     5281 gatgaactct ctggcgggat gcgtcaacgt gtgggattag cccgcgcgtt agcgattaat
     5341 ccggatatat tattaatgga cgaagccttc tcggcgctcg atccattaat tcgcaccgag
     5401 atgcaggatg agctggtaaa attacaggcg aaacatcagc gcaccattgt ctttatttcc
     5461 cacgatctcg atgaagctat gcgtattggc gaccgaattg ccattatgca aaatggtgaa
     5521 gtggtacagg tcggcacacc ggatgaaatt ctcaataatc cggcgaatga ttatgtccgt
     5581 accttcttcc gtggtgttga tattagtcag gtattcagtg cgaaagatat tgcccgccgg
     5641 acaccgaatg gcttaattcg taaaacccct ggcttcggcc cacgttcggc actgaaatta
     5701 ttgcaggatg aagatcgcga atatggctac gttatcgaac gcggtaataa gtttgtcggc
     5761 gcagtttcca tcgattcgct taaaaccgcg ttaacgcagc agcaaggtct tgatgcggcg
     5821 ctgattgatg cgccgttagc agtcgatgca caaacgcctc ttagcgagtt gctctctcat
     5881 gtcggacagg caccctgtgc ggtgcccgtg gtcgacgagg accaacagta tgtcggcatc
     5941 atttcgaaag gaatgctgct gcgcgcttta gatcgtgagg gggtaaataa tggctgatca
     6001 aaataatccg tgggatacca cgccagcggc ggacagtgcc gtgcaatccg cagacgcctg
     6061 gggtacaccg gcgactgcac cgactgacgg cggtggtgct gactggctga ccagtacgcc
     6121 tgcgccaaac gtcgagcatt ttaatattct cgatccgttc cataaaacgc tgatcccgct
     6181 cgacagttgg gtcactgaag ggatcgactg ggttgttacc catttccgtc ccgtcttcca
     6241 gggcgtgcgc gttccggttg attatatcct caacggtttc cagcaattgc tgctgggtat
     6301 gcccgcaccg gtggcgatta tcgttttcgc tctcatcgcc tggcagattt ccggggtcgg
     6361 aatgggcgtg gcgacgctgg tttcgctgat tgccatcggc gcaatcggtg cctggtcgca
     6421 ggccatggtt accctggcgc tggtgttaac cgccctgctg ttctgtatcg tcattggttt
     6481 gccgctgggg atctggctgg cgagaagtcc gcgagcggcg aaaattattc gtccactgct
     6541 tgatgccatg cagaccacgc cagcgtttgt ttatctggtg ccaatcgtca tgctatttgg
     6601 tatcggtaac gtgccgggcg tggtggtgac gatcatcttt gctctgccgc cgattatccg
     6661 tctgaccatt ctggggatta accaggttcc ggcggatctg attgaagcct cgcgctcatt
     6721 cggtgccagc ccgcgccaga tgctgttcaa agttcagtta ccgctggcga tgccgaccat
     6781 tatggcgggc gttaaccaga cgctgatgct ggccctttct atggtggtca ttgcctcgat
     6841 gattgccgtc ggcgggctgg gtcagatggt acttcgcggt atcggtcgtc tggatatggg
     6901 gcttgccacc gttggcggcg tcgggattgt gatcctcgcc attatcctcg atcgcctgac
     6961 gcaggccgtt gggcgcgact cacgcagtcg cggcaaccgt cgctggtaca ccactggccc
     7021 tgttggtctg ctgacccgcc cattcattaa gtaactctgc acttgcccgg tgacgccggg
     7081 cattatcacc ctgccaaaaa aaggaataac aatgcgacat agcgtacttt ttgcgacagc
     7141 gtttgccacg cttatctcta cacaaacttt tgctgccgat ctgccgggca aaggtattac
     7201 tgttaatcca gttcaaagta ccatcaccga agaaaccttc cagacgctgc tggtcagccg
     7261 tgcgctggag aaattaggct ataccgtcaa caaacccagc gaagtagatt acaacgttgg
     7321 ctacacctcg cttgcttccg gcgatgcaac cttcaccgcc gtgaactgga cgccactgca
     7381 tgacaacatg tacgaagctg ccggtggcga taagaaattt tatcgtgaag gggtatttgt
     7441 taacggcgcg gcacagggtt acctgatcga taagaaaacc gccgaccagt acaaaatcac
     7501 caacatcgca caactgaaag atccgaagat cgccaaactg ttcgatacca acggcgacgg
     7561 taaagcggat ttaaccggtt gtaaccctgg ctggggctgc gaaggtgcga tcaaccacca
     7621 gcttgccgcg tatgaactga ccaacaccgt gacgcataat caggggaact acgcagcgat
     7681 gatggccgac accatcagtc gctacaaaga gggcaaaccg gtgttttatt acacctggac
     7741 gccgtactgg gtgagtaatg agctgaagcc agggaaagat gtggtctggt tgcaggtgcc
     7801 gttctccgca ctgccgggcg ataaaaatgc cgataccaaa ctgccgaatg gcgcgaatta
     7861 cggcttcccg gtcagcacca tgcatatcgt tgccaacaaa gcctggaccg agaaaaatcc
     7921 ggcggcagcc aaactgtttg ccattatgca gttgccagtg gccgatatta acgcccagaa
     7981 cgccattatg catgacggca aagcctcaga aggcgatatt cagggccacg ttgatggctg
     8041 gatcaaagcc caccagcagc agttcgatgg ctgggtgaat gaggcgctgg cagcgcagaa
     8101 gtaattttta ttcaggcgga taaggcgttt ttgcctcatc cgccgctctg tacacaatgc
     8161 ctgatgcgac gctgacgcgt cttatcatgc ctacaaaata cactcattcc gtatggcgga
     8221 taaggcgttt tcgccgcatc cgccgttctg tgcacaatgc ctgatgcgac gctggcgcgt
     8281 cttatcatgc ctacaaacca catcgcacat ttcaacaagc tatctttcat cccatattca
     8341 tcaacatccg ctattattga tttccagctt aatcatcacc tgatgaacaa aaataatgac
     8401 taaacctaat catgagctta gcccggcgct gatcgtgctg atgtctatcg ccaccggtct
     8461 ggcggtagcc agtaactatt acgcccagcc attgctcgac accatcgcgc gtaacttttc
     8521 cctttccgcc agttcggcag gctttattgt taccgccgcg caattgggct atgcagcagg
     8581 tctgctgttt cttgttcccc tcggtgatat gtttgaacgc cgccgcctga ttgtctcgat
     8641 gaccttactg gcggcaggcg gcatgttaat cactgccagc agtcagtcgc tggcgatgat
     8701 gatcctcggt acggcattaa ccggtttatt ctctgtcgtg gcacaaattc tggttccgct
     8761 ggcagcgacg ctggcttcac cggacaaacg cggcaaagtg gttggcacta ttatgagcgg
     8821 tctgctgttg gggatcttac tcgcacggac cgttgccgga ttgctggcga atctcggcgg
     8881 ctggcgcacc gtcttttggg ttgcctcggt gttaatggca ctgatggcgc tggcattatg
     8941 gcgtggtctg ccacaaatga aatcagaaac ccacctcaac tacccacagt tgttaggttc
     9001 cgttttcagc atgtttatca gcgataagat cctgcgcacc cgcgcattgc tgggctgcct
     9061 gacctttgcc aacttcagca ttctctggac ctcaatggcc tttttgcttg ccgctccacc
     9121 ttttaactac agcgatggtg tcattggtct gtttggactt gcgggagctg ccggagcgtt
     9181 gggcgctcgt ccggcgggcg gttttgccga taagggtaaa tcgcaccaca ccacaacttt
     9241 cggtctgctg ctgctattac tttcatggct ggcgatctgg tttggtcaca cttccgtact
     9301 ggcgctgatt atcggcatcc tggtgctgga tctcaccgta cagggcgtgc atatcacta
//
LOCUS       DADMHC010000157         9162 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.160, whole genome shotgun sequence.
ACCESSION   DADMHC010000157 DADMHC010000000
VERSION     DADMHC010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9162)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9162)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9162
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.160"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            176..1150
                     /gene="cysB"
                     /locus_tag="JNZ57_003124"
     CDS             176..1150
                     /gene="cysB"
                     /locus_tag="JNZ57_003124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012017585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator CysB"
                     /protein_id="HAY8829246.1"
                     /translation="MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDEL
                     GIQIFSRSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHT
                     QARYALPNVIKGFIERYPRVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVM
                     LPCYHWNRAIVVTPDHPLAGKKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTP
                     RIVFTATDADVIKTYVRLGLGVGVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRR
                     STFLRSYMYDFIQRFAPHLTRDVVDAAVALRSNEEIEVMFKDIKLPEK"
     gene            1445..1609
                     /locus_tag="JNZ57_003125"
     CDS             1445..1609
                     /locus_tag="JNZ57_003125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmiA family putative membrane protein"
                     /protein_id="HAY8829247.1"
                     /translation="MLISDGDYMRLAMPSGNQEPRRDPELKRKAWLAVFLGSALFWVV
                     VALLIWKVWG"
     gene            1612..1779
                     /locus_tag="JNZ57_003126"
     CDS             1612..1779
                     /locus_tag="JNZ57_003126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588450.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829248.1"
                     /translation="MVGQEQLESSPLCQHSDNETETKRECSVVIPDDWQLTSQQQAFI
                     ELFAEDDQPKQ"
     gene            1869..1949
                     /locus_tag="JNZ57_003127"
     CDS             1869..1949
                     /locus_tag="JNZ57_003127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014832221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829249.1"
                     /translation="MKYWSWMGAFSLSMLFWAELLWIITH"
     gene            2113..4634
                     /locus_tag="JNZ57_003128"
                     /pseudo
     CDS             2113..4634
                     /locus_tag="JNZ57_003128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415792.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase"
     gene            complement(4698..5288)
                     /gene="ribA"
                     /locus_tag="JNZ57_003129"
     CDS             complement(4698..5288)
                     /gene="ribA"
                     /locus_tag="JNZ57_003129"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HAY8829250.1"
                     /translation="MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHT
                     PVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKI
                     RAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTE
                     AGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK"
     gene            5458..6222
                     /gene="pgpB"
                     /locus_tag="JNZ57_003130"
     CDS             5458..6222
                     /gene="pgpB"
                     /locus_tag="JNZ57_003130"
                     /EC_number="3.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase B"
                     /protein_id="HAY8829251.1"
                     /translation="MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWV
                     TETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQE
                     PRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFP
                     SGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLI
                     SWALVAVATWLAQRICGPLTPPAEENREIAQREQES"
     gene            6371..6679
                     /gene="lapA"
                     /locus_tag="JNZ57_003131"
     CDS             6371..6679
                     /gene="lapA"
                     /locus_tag="JNZ57_003131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapA"
                     /protein_id="HAY8829252.1"
                     /translation="MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTL
                     LAVLFAAGFAIGWLICGLFWLRVRVSLARAERKIKRLENQLSPATDVAVVPHSSAAKE
                     "
     gene            6686..7855
                     /gene="lapB"
                     /locus_tag="JNZ57_003132"
     CDS             6686..7855
                     /gene="lapB"
                     /locus_tag="JNZ57_003132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HAY8829253.1"
                     /translation="MLELLFLLLPVAAAYGWYMGRRSAQQNKQDEANRLSRDYVAGVN
                     FLLSNQQDKAVDLFLDMLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLT
                     YEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEWQKA
                     IDVAERLVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSI
                     MMGRVFMAKGEYAKAVESLQRVISQDRELVSETLEMLQTCYQQLGKTAEWAEFLQRAV
                     EENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLMDYHLNEAEEGRA
                     KESLMVLRDMVGEKVRSKPRYRCQKCGFTAYTLYWHCPSCRAWSTIKPIRGLDGL"
     gene            8048..8785
                     /gene="pyrF"
                     /locus_tag="JNZ57_003133"
     CDS             8048..8785
                     /gene="pyrF"
                     /locus_tag="JNZ57_003133"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HAY8829254.1"
                     /translation="MTLTASSSSRAVTNSPVVVALDYHNRDDALSFVDKIDPRDCRLK
                     VGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASG
                     GARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLADLGVTLSPADYAERLAALTQK
                     CGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSDAGDQRRIMTPEQALAAGVDYM
                     AIGRPVTQSVDPAQTLKAINASLQRSA"
     gene            8785..9111
                     /gene="yciH"
                     /locus_tag="JNZ57_003134"
     CDS             8785..9111
                     /gene="yciH"
                     /locus_tag="JNZ57_003134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415798.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response translation initiation inhibitor
                     YciH"
                     /protein_id="HAY8829255.1"
                     /translation="MSDSNSRLVYSTETGRIDEPKAAPVRPKGDGVVRIQRQTSGRKG
                     KGVCLITGIDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMK
                     VKLAGG"
BASE COUNT         2267 a         2137 c         2395 g         2363 t
ORIGIN      
        1 tcgcgaaagc ggcccttttt tattgcatat tattttttct tcacacctat acactaaggc
       61 tataaatgat atagtggtta tagttagcac cttttttatt attaaatcgt attagtcacc
      121 cgccaggtgt gacgaaaaaa cgatgttctg atggcgtcta agtggatggt ttaacatgaa
      181 attacaacaa cttcgctata ttgttgaggt ggtcaatcat aacctgaatg tctcatcaac
      241 agcggaagga ctttacacat cacaacccgg gatcagtaaa caagtcagaa tgctggaaga
      301 cgagctaggc attcaaattt tttcccgaag cggcaagcac ctgacgcagg taacgccagc
      361 agggcaagaa ataattcgta tcgctcgcga agtcctgtcg aaagtcgatg ccataaaatc
      421 ggttgccgga gagcacacct ggccggataa aggctcactg tatatcgcca ccacgcatac
      481 ccaggcacgc tacgcattac caaacgtcat caaaggcttt attgagcgtt atcctcgcgt
      541 ttctttgcat atgcaccagg gctcgccgac acaaattgct gatgccgtct ctaaaggcaa
      601 tgccgatttc gctatcgcca cagaagcgct gcatctgtat gaagatttag tgatgttacc
      661 gtgctaccac tggaatcggg ctattgtagt cactccggat cacccgctgg caggcaaaaa
      721 agccattacc attgaagaac tggcgcaata tccgttggtg acatatacct tcggctttac
      781 cggacgttca gaactggata ctgcctttaa ccgcgcaggg ttaacgccgc gtatcgtttt
      841 cacggcaacg gatgctgacg tcattaaaac ttacgtccgg ttagggctgg gggtaggggt
      901 cattgccagc atggcggtgg atccggtcgc cgatccggac cttgtgcgcg ttgatgctca
      961 cgatatcttc agccacagta caaccaaaat tggttttcgc cgtagtactt ttttgcgcag
     1021 ttatatgtat gatttcattc agcgttttgc accgcattta acgcgtgatg tcgttgatgc
     1081 ggctgtcgca ttgcgctcta atgaagaaat tgaggtcatg tttaaagata taaaactgcc
     1141 ggaaaaataa tttcttgcgt tattttcggc accttttatg tagcgaaggt gccggaatat
     1201 attctctttt gttacttatt tctataccgt gcacaatatt tttatccctc atatttatag
     1261 ggtaaattac ctgtaaagta gtgtctaatt acccgcctcg caaattccag ttttcaaata
     1321 tctatttcag gtcaaaagat tgaattattc actggagacg attcgtaaat tcgctggatt
     1381 tttgactaaa gtttctttag gatttgtctc atcgtatgat taattacacc aatcgttcaa
     1441 cgtcttgctg ataagtgatg gcgattatat gaggttagca atgccttctg gaaatcagga
     1501 accccgccgc gatcctgaat taaaacgtaa agcctggctg gcggtttttc ttggttctgc
     1561 acttttctgg gtggttgtcg cactgctgat ttggaaagtg tggggataac tatggtcggt
     1621 caggagcaac tggagtcgtc accattatgc cagcatagtg acaatgaaac agaaacgaaa
     1681 cgggaatgtt ccgtcgttat tccagacgac tggcaactaa catcgcagca gcaagccttt
     1741 atagaactgt ttgctgaaga tgatcagccg aaacaataat tatcatcatt cttattaccc
     1801 atttttaatg aattaaaggg cttttaatac accgcagcaa taacagcttg agttatctca
     1861 acacaaatat gaaatattgg tcctggatgg gcgcgttttc tctgtcgatg ctcttctggg
     1921 ccgaactcct ctggatcatt actcactgat ccttgacccc gctgcggcgg ggttgtcatt
     1981 tgctttgcca caaggtttct cctcttttat caatttgggt tgttatcaaa tcgttacgcg
     2041 atgtttgtgt tatctttaat attcactctg aagagaatca gggcttcgca accctatcat
     2101 taaggaggag ctatgtcgtc aaccctacga gaagccagta aggacacgtt gcaggccaaa
     2161 gataaaactt accactacta cagcctgccg cttgctgcta aatcactggg cgatatcacc
     2221 cgtctaccca agtcactcaa agttttgctc gaaaacctgc tgcgctggca ggatggtaac
     2281 tcggttaccg aagaggatat ccacgcgctg gcaggatggc tgaaaaatgc ccatgctgac
     2341 cgtgaaattg cctaccgccc ggcaagggtg ctgatgcagg actttaccgg cgtacctgcc
     2401 gttgttgatc tggcggcaat gcgcgaagcg gttaaacgcc tcggcggcga tactgcaaag
     2461 gttaacccgc tctcaccggt cgacctggtc attgaccact cagtgaccgt cgatcgtttt
     2521 ggtgatgatg aggcatttga agaaaacgta cgcctggaaa tggagcgcaa ccacgaacgt
     2581 tatgtgttcc tgaaatgggg aaagcaagcg ttcagtcggt ttagcgtcgt gccgccaggc
     2641 acaggcattt gccatcaggt taacctcgaa tatctcggca aagcagtgtg gagtgaattg
     2701 caggacggtg aatggattgc ttatccggat acactcgttg gtactgactc gcacaccact
     2761 atgatcaacg gccttggcgt gctggggtgg ggcgtgggtg ggatcgaagc agaagccgca
     2821 atgttaggcc agccggtttc catgcttatc ccggacgtag tgggctttaa acttaccggt
     2881 aaattacgtg aaggtattac cgccacagac ctggttctca ctgttaccca aatgctgcgc
     2941 aaacatggcg tggtggggaa attcgtcgaa ttttatggtg atggtctgga ttcactaccg
     3001 ctggcggatc gcgccaccat tgccaatatg tcgccagaat atggtgccac ctgtggcttc
     3061 ttcccaatcg atgctgtaac cctcgattac atgcgtttaa gcgggcgcag cgaagatcag
     3121 gttgagttgg tcgaaaaata tgccaaagcg cagggcatgt ggcgtaaccc gggcgatgaa
     3181 ccgattttta ccagtacgtt agaactggat atgaatgacg ttgaagcgag cctggcaggg
     3241 ccaaaacgcc cacaggatcg cgttgcactg cccgatgtac caaaagcatt tgccgccagt
     3301 aacgaactgg aagtgaatgc cacgcataaa gatcgccagc cggtcgatta tgttatgaac
     3361 ggacatcagt atcagttacc tgatggcgct gtggtcattg ctgcgataac ctcgtgcacc
     3421 aacacctcta acccaagtgt gctgatggcc gcaggcttgc tggcgaaaaa agccgtaact
     3481 ctgggccgct gcccgatcct atcgaaacgg caatcaaaaa aggcgattta accgtcggtg
     3541 cggtgctgtc cggcaaccgt aactttgaag gccgtatcca tccgctggtt aaaactaact
     3601 ggctggcctc gccgccgctg gtggttgcct atgcgctggc gggaaatatg aatatcaacc
     3661 tggctgctga gcctattggt catgatcgta aaggcgaccc ggtttatctg aaagatatct
     3721 ggccatcggc acaagaaatt gcccgtgcgg tagaacaagt ctccacagaa atgttccgta
     3781 aagagtacgc agaagttttt gaaggcacag cagagtggaa ggaaattaac gtcacacgat
     3841 ccgataccta cggttggcag gaggattcaa cctatattcg cttatcgcct ttctttgatg
     3901 aaatgcaggc aacaccagca cctgtggaag atattcacgg tgcgcggatc ctcgcaatgc
     3961 tgggggattc agtcaccact gaccatatct ctccggcggg cagtattaag cccgacagcc
     4021 cggcgggtcg atatctacaa ggtcggggtg ttgagcgaaa agactttaac tcctacggtt
     4081 cgcggcgtgg taaccatgaa gtgatgatgc gcggcacctt cgccaatatt cgcatccgta
     4141 atgaaatggt gcctggcgtt gaagggggga tgacgcggca tttacctgac agcgatgttg
     4201 tctctatcta tgatgccgcg atgcgctata agcaggagca aacgccgctg gcggtgattg
     4261 ccgggaaaga gtatggatca ggctccagcc gtgactggac ggcaaaaggt ccgcgtctgc
     4321 ttggtattcg tgtggtgatt gccgaatcgt ttgaacgaat tcaccgttcg aatttaattg
     4381 gcatgggcat cttgccgctg gaatttccgc aaggcgtgac gcgtaaaacg ttagggctaa
     4441 ccggggaaga gaagattgat attggcgacc tgcaaaatct acaacccggc gcgacggttc
     4501 cggtgacgct tacgcgcgcg gatggtagcc aggaagtcgt accctgccgt tgtcgtatcg
     4561 acaccgcgac ggagttgacc tactaccaga acgacggcat tttgcattat gtcattcgta
     4621 atatgctgaa gtaacaagta tttgcttgcc ggttattttg cttccggcaa gcaaattaat
     4681 tccacaatgc gagagggtta tttgttcagc aaatgaccca ttttctcggc tttggtatcg
     4741 agataatgtt cgttattggg gttacgacct acaatcaatg gtacgcgttc aacaatatta
     4801 atccctgctt cggtcagaat ttcgactttt ttcgggttat tggttaacaa gcggacttca
     4861 ttgacgccaa ggagtttgaa catatcagcg caaagagtga agtcgcgctc atcagcggcg
     4921 aagcctaact ggtggttagc ctctacggta tcgtaacctt gatcctgcag tgcgtaagcg
     4981 cggattttat tcagcagacc aatgttacga ccttcctgac ggtgatacag caaaatacca
     5041 cggccttcct cggcaatttg cgtcaatgcc gcttcgagct ggaagccaca atcgcagcgc
     5101 aagctgaaca gggcgtcacc ggtcagacat tcggaatgga cgcgcgcaag taccggggta
     5161 tgcccggaaa tatcgccata gactagcgcg acatgatcgt gtccggttgc cagttcttca
     5221 aatcccacca tcaggaaatc gccccatggg gttggcagtt tggcttctgc cacacgttta
     5281 agctgcatga aattctccag ataatgctgg ttctgtattg gcttattttg ccataacgag
     5341 aaggggttca cctaatcacg acgcgtcgat cgttcacgga atggcacaaa tctgtcaatt
     5401 tttcctggaa ctggcgtttt cagttatgat tgtgggactt atcaaaaagg agaggccatg
     5461 cgttcgattg ccagacgtac cgcagtggga gctgcactat tgcttgtcat gccagtagcc
     5521 gtatggattt ctggctggcg ttggcaacct ggagaacaaa gttggctact aaaagcggct
     5581 ttttgggtta ctgaaactgt cacccagccc tggggcgtca ttacacattt gattttattc
     5641 ggctggtttc tctggtgtct gcgttttcgc attaaggctg cctttgtatt atttgccatt
     5701 ctggcggccg caatccttgt gggacaaggc gttaaatcct ggatcaaaga caaagtccag
     5761 gaaccacgac cttttgttat ctggctggaa aaaacacatc atattccggt tgatgagttc
     5821 tacactttaa agcgagcaga acgcggaaat ctagtgaaag aacagttggc tgaagagaaa
     5881 aatatcccac aatatttgcg ttcacactgg cagaaagaga cggggtttgc ctttccttcc
     5941 ggtcacacga tgtttgctgc cagttgggca ctgctggccg ttggtttgct gtggccgcgt
     6001 cggcgaacgt taaccattgc tatcttgctg gtctgggcaa cgggagtcat gggaagccgc
     6061 ctgctgctcg ggatgcattg gccacgcgat ctggtagtag ctacgttgat ttcgtgggcg
     6121 ctggtggcgg tggcaacgtg gcttgcgcaa cgaatttgtg ggccattaac accacctgcg
     6181 gaagaaaatc gcgaaatagc gcaacgagaa caagaaagtt aacgctggtt gattttccga
     6241 atttagccct taaatcatca acaatgcgcg tggatgccat ttcgcagacg gcgcgaaaat
     6301 ggtactttaa agggctattg cggtaagttg accataattt attcgctcta accacataac
     6361 gggaagtaat gtgaaatatt tactcatttt cttactggtg ttagcgatct tcgtgatttc
     6421 ggtcacgttg ggtgcgcaga acgatcaaca ggtgacgttt aattatctgt tagcgcaagg
     6481 ggagtaccgt atttccacat tgctggcggt attgtttgct gcggggtttg ctatcggttg
     6541 gttgatttgt ggcctgttct ggctgcgagt tcgtgtttcc ctggcgcgcg ctgaacgtaa
     6601 aataaagcga ctggaaaacc agctttcacc cgcgactgac gtggctgtag tgccgcactc
     6661 gtcagcggcg aaggaataac tttctatgct ggagttgttg tttctgcttt tgcctgtagc
     6721 cgctgcctat ggctggtata tgggccgcag aagtgcgcaa caaaacaagc aagatgaagc
     6781 caaccgcttg tcgcgtgatt acgtagcggg ggttaacttc ctgcttagta atcaacagga
     6841 taaagcggta gacctgtttc tcgatatgct taaagaggat acaggcaccg ttgaagccca
     6901 ccttacgctc ggaaacctgt tccgttcgcg tggcgaagtt gatcgcgcta ttcgcatcca
     6961 tcagacccta atggaaagcg cctcgctgac ctatgaacag cgtctgttgg cgattcaaca
     7021 actagggcgt gattacatgg ccgccgggtt atacgaccgc gcggaagaca tgttcaatca
     7081 gctgaccgat gaaactgact tccgcattgg cgctctgcaa cagttgctac aaatctacca
     7141 ggctaccagt gagtggcaga aagcaattga tgttgccgaa cgcctggtga agctgggtaa
     7201 agataaacag cgcgtcgaaa ttgcccattt ctactgtgag ttagccctgc agcatatggc
     7261 cagcgacgat ctcgatcgtg ccatgacctt gctaaaaaaa ggggcggcgg cagataaaaa
     7321 cagcgcccgc gtatccatca tgatgggacg cgtgtttatg gcgaaaggag aatacgccaa
     7381 agccgtcgaa agtttgcaac gcgtgatatc ccaggacaga gaactggtca gcgaaacgct
     7441 ggaaatgttg caaacctgct atcagcagtt gggtaaaact gccgaatggg cagaattcct
     7501 gcaacgcgcg gtggaagaga acaccggtgc cgatgctgaa ttgatgcttg ctgatatcat
     7561 cgaagcgcgc gacggtagtg aggccgcaca ggtctatatt acgcgccagc ttcagcgtca
     7621 tccgaccatg cgtgtgttcc ataagttaat ggattaccac ttaaatgaag cggaagaagg
     7681 gcgtgccaaa gagagcctga tggtgctgcg tgacatggtt ggcgaaaagg tacgtagtaa
     7741 gcctcgttat cgctgccaga aatgtggttt taccgcatac accctctact ggcattgtcc
     7801 gtcttgtcgg gcctggtcaa ccattaaacc gattcgcggt cttgatggcc tgtaattttt
     7861 aaaaaaatcc gactttagtt acaacatact agttattgat gttccattgt gctccggcaa
     7921 cgacggagca gaaaaagcct gccaggggaa aaatcgcaac tgttaatttt ttatttccac
     7981 gggtagaatg ctcgccgttt acctgtttcg cgccacttcc ggtgcccatc atcaagaagg
     8041 tctggtcatg acgttaactg cttcatcttc ttcccgcgct gttacgaatt ctcctgtggt
     8101 tgttgccctt gattatcata atcgtgatga cgcgctgtcc tttgtcgaca agatcgaccc
     8161 acgcgattgt cgtctgaagg tcggcaaaga gatgtttaca ttgtttgggc cacagtttgt
     8221 gcgcgaactt caacagcgtg gttttgatat ctttcttgac ctgaaattcc acgatattcc
     8281 taacactgca gcgcacgctg tcgctgctgc agctgactta ggcgtgtgga tggtgaatgt
     8341 tcatgcctct ggtggggcgc gtatgatgac cgcagcgcgt gaggcactgg ttccgtttgg
     8401 caaagatgca ccgcttttga ttgctgtaac agtgttgacc agcatggaag ctagcgacct
     8461 ggccgatctt ggcgtgacac tgtcacctgc agattatgca gaacgtctgg cggcactgac
     8521 gcaaaaatgt ggccttgatg gtgtggtgtg ttctgctcag gaagctgtgc gctttaaaca
     8581 ggtattcggt caggagttca aactggttac accgggcatt cgtccgcagg ggagtgatgc
     8641 tggtgaccag cgccgcatta tgacgccaga acaggcgttg gcggctggtg ttgattatat
     8701 ggcgattggt cgcccggtaa cgcaatcggt agatccagcg caaacactga aagcgatcaa
     8761 cgcctcttta cagcggagtg catgatgagt gattccaaca gccgtctggt ctactcaacg
     8821 gaaaccggac gtattgatga gccaaaagcg gccccagtac gccctaaagg cgatggtgtg
     8881 gtgcgtattc agcgtcagac cagtggacgt aaaggtaagg gcgtttgcct gattaccggt
     8941 atcgatctcg atgatgccga actgacaaaa cttgcagcgg aactgaagaa aaaatgcggc
     9001 tgcggcggag cagttaaaga tggagttatt gaaatccagg gcgataagcg tgatttatta
     9061 aaatcactac ttgaagcgaa agggatgaag gtaaaactcg caggcggtta acataaaaag
     9121 ccacggatat atccgtggct ttcgaatatt ttactgtgtg ta
//
LOCUS       DADMHC010000158         9157 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.161, whole genome shotgun sequence.
ACCESSION   DADMHC010000158 DADMHC010000000
VERSION     DADMHC010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9157)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9157)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9157
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.161"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..445
                     /locus_tag="JNZ57_003135"
     CDS             <1..445
                     /locus_tag="JNZ57_003135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005105555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HAY8829256.1"
                     /translation="VLSLKWEQIGNDGIFIQQGKTGKKQIKAWSPRLQAAIEKAKQLP
                     TSAYVISNQYGNRYMYKGFNEMWVEARNRAGKISGILTDFTFHDLKAKGISDYEGSSR
                     DKQLFSGHKTEGQVLIYDRKVKVSPTLDVPLPENIPSNSTCDFCH"
     gene            complement(473..562)
                     /locus_tag="JNZ57_003136"
     tRNA            complement(473..562)
                     /locus_tag="JNZ57_003136"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(526..528),aa:Ser,seq:cga)
     gene            656..1453
                     /gene="mtfA"
                     /locus_tag="JNZ57_003137"
     CDS             656..1453
                     /gene="mtfA"
                     /locus_tag="JNZ57_003137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310801.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DgsA anti-repressor MtfA"
                     /protein_id="HAY8829257.1"
                     /translation="MIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVTLAE
                     RFLQQKRLVPLQGFELDSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDE
                     WEDDIGLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGD
                     RASGVPFIPLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSE
                     YFFSAPELFAPRFPSLWQRFCQFYQQDPLQRLHHANDTDSFSATNVH"
     gene            1554..1629
                     /locus_tag="JNZ57_003138"
     tRNA            1554..1629
                     /locus_tag="JNZ57_003138"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1587..1589,aa:Asn,seq:gtt)
     gene            1943..8699
                     /locus_tag="JNZ57_003139"
                     /pseudo
     CDS             1943..8699
                     /locus_tag="JNZ57_003139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416485.4"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter adhesin-like protein
                     YeeJ"
BASE COUNT         2602 a         2246 c         2241 g         2068 t
ORIGIN      
        1 tgtgttatcg ctgaaatggg agcagattgg aaacgacggg atctttatcc agcaagggaa
       61 aacaggaaaa aaacagataa aagcatggag tccacgatta caggcggcga tcgaaaaagc
      121 aaaacagtta ccaacatccg cctatgtaat cagcaatcaa tacggcaacc gatatatgta
      181 caaaggcttt aacgaaatgt gggtagaagc aagaaatcgc gcaggcaaaa tttcaggtat
      241 tttaaccgac ttcacctttc atgatctgaa ggcgaaagga atttcagact atgaaggaag
      301 cagtcgggat aagcaacttt tctctggtca caaaaccgag gggcaagtgc taatctatga
      361 caggaaggtt aaagtttcac cgacacttga tgtcccgtta cctgaaaata ttccaagtaa
      421 ttccacgtgt gatttttgtc actgacttaa tgatgtataa gtgattgaat tttggcggag
      481 agagggggat ttgaaccccc ggtggagttg cccccactcc ggttttcgag accggtccgt
      541 tcagccgctc cggcatctct ccgttcagat ggttgccatg atgccaggaa atttggcatt
      601 ttaacagtcc ctgtccgtgc aattttgttc aagtgacgag tttgcgagca aaacgatgat
      661 taagtggccc tggaaagtac aagaatcagc acatcaaact gcccttccct ggcaggaagc
      721 actatcgatc ccccttttaa cgtgtctgac ggaacaggaa caaagcaaat tagtcactct
      781 tgccgaacgt tttttacagc aaaagcggct tgttccttta cagggctttg aactggattc
      841 attaagaagc tgccggatag cacttctatt ttgcctaccc gttctggagt taggactgga
      901 atggctggat ggttttcatg aagtcttaat ttatcctgcg ccatttgtgg tcgatgatga
      961 atgggaagac gatatcggtc tggtgcataa ccaacgtatt gttcagtcag gtcagagctg
     1021 gcagcaaggg cctatcgttt tgaactggtt ggatatacaa gattcttttg atgcttctgg
     1081 ttttaacctg attattcatg aagtcgctca taagctggac acccgtaacg gcgatcgcgc
     1141 cagcggagtt ccctttattc cgttgcgtga ggttgctggc tgggaacacg atcttcatgc
     1201 tgcaatgaac aacattcagg aagaaatcga attggttggc gagaatgcgg cgagcattga
     1261 tgcttatgca gccagcgatc ctgctgaatg ttttgccgta ctttctgaat atttctttag
     1321 cgccccagaa ctttttgctc ctcgtttccc ttcattgtgg caacgtttct gccaatttta
     1381 tcaacaagat cctttgcaga gactgcatca cgctaatgat acagactcgt tttcggcgac
     1441 gaatgttcat taattaacaa ctttgcagat taattaacca attgaaatga cttatgaaat
     1501 ttagtgttga cagacaaggt accgctaagt aatatgcgcc ccgttcacac gattcctctg
     1561 tagttcagtc ggtagaacgg cggactgtta atccgtatgt cactggttcg agtccagtca
     1621 gaggagccaa attctaaaaa ttcgcttttt tagcgcaatg tcactgacct tagttgaaca
     1681 ttgtttttta acggatagcg ggtttttaac atcttaagcg ccctcgacct ttatggttga
     1741 tggcgttttg ctatgaacgc catcaccatt ttcccctcga ttataaaact tgagttattc
     1801 agtagtctcc cctcttgcaa ctcacaccca aaactgccta acgaaaagtt attaattttc
     1861 aatcatattg ctatcagtat ttacattttt tcgctgtgct agaaagggcg catttatgtt
     1921 agctcgttca gggaaggtaa gcatggctac gaagaagaga agtggagaag aaataaatga
     1981 ccgacaaata ttatgcggga tgggaattaa actacgccgc ttaactgcgg gtatctgtct
     2041 gataactcaa cttgcgttcc ctatggctgc ggcagcacaa ggtgtggtaa acgccgcaac
     2101 ccaacaacca gttcctgcac aaattgccat tgcaaatgcc aatacggtgc cctacaccct
     2161 tggagcgctg gaatcggccc aaagcgttac cgaacgtttc ggtatttcgg tggctgagtt
     2221 acgcaaactc aaccagtttc gtacgtttgc tcgaggtttt aataatgtcc gccagggtga
     2281 tgaactggat gtcccggcac aagttagtga aaaaaaatta accccgccgc cgggtaatag
     2341 cagtgacaac ctcgagcaac agatagccag tacttcacag caaatcgggt ctctgctcgc
     2401 cgaagatatg aacagcgagc aagcggcaaa tatggcgcgt ggatgggcct cttctcaggc
     2461 ttcaggcgca ataacagact ggttaagccg cttcggtacc gcaagaatca cgctgggcgt
     2521 ggatgaagat tttagcctga agaactccca gttcgatttt ctccatccgt ggtatgaaac
     2581 gcctgataat ctctttttca gtcagcatac tctccatcgt actgacgagc gtacgcagat
     2641 taacaacggc ttaggttggc gtcatttcac tcccacatgg atgtcaggca tcaacttctt
     2701 tttcgaccac gatcttagcc gttaccactc ccgcgccggc attggcgcgg agtactggcg
     2761 cgactatcta aaattaagca gtaacggcta tttgcgactg accaactggc gcagcgcacc
     2821 tgaactggac aacgattatg aagcacgccc ggccaatggc tgggatgtac gcgcagaaag
     2881 ctggctaccc gcctggccgc accttggcgg taaactggtc tatgaacagt attatggcga
     2941 tgaagtggcc ctgttcgata aagacgatcg gcaaagtaat cctcatgcca taaccgctgg
     3001 acttaactat acccccttcc cgctgatgac cttcagcgcg gagcaacgcc agggtaaaca
     3061 gggcgaaaat gacacccgtt ttgccgtcga ttttacctgg caacctggca gcgcaatgca
     3121 gaaacagctt gacccgaatg aagtcgctgc acggcgtagc cttgcaggca gccgttatga
     3181 tctggtggat cgcaacaaca atatcgttct ggaatatcgc aaaaaagaac tggttcgcct
     3241 gaccctgaca gaccccgtga cagggaagtc aggagaagtg aaatcactgg tttcgtcgct
     3301 acaaaccaaa tatgccctga aaggctataa cgtcgaagcc accgcactgg aagctgccgg
     3361 tggcgaagtg gtcacaacgg gtaaagatat tctggttacc ctgccggctt accggttcac
     3421 cagtacgcca gaaaccgata acacctggcc gattgaagtc accgctgaag atgtcaaagg
     3481 caatttgttc gaatcgtgaa cagagcatgg tagccgttca ggcacctacg ttaagccaga
     3541 aagattcctc ggtatcgtta agtacccaga cgttgagcgc ggattcccat tcaaccgcca
     3601 cactgacttt tattgcgcat gatgcagcag gtaatcctgt tatcgggctg gtgctctcga
     3661 cgcgtcacga aggtgttcag gacatcaccc tttctgactg gaaagataat ggtgacggaa
     3721 gctataccca gatcctgacc acaggtgcga tgtctggcac gctgacgctt atgccacagc
     3781 tgaacggtgt ggatgcggct aaagcccccg ccgtggtgaa tatcatttct gtttcgtcat
     3841 ctcggactca ctcgtcaatt aagattgata aggaccgtta tctctccggc aatcctatcg
     3901 aggtaacggt agaactgaga gatgaaaatg acaaacctgt taaggagcaa aaacagcaac
     3961 tgaataccgc agtcagcatc gacaatgtga aacctggtgt cactacagac tggaaagaaa
     4021 ccgcagatgg cgtctataag gcaacctata ccgcctatac caaaggcagt gggcttactg
     4081 cgaagctatt aatgcaaaac tggaatgaag atttacatac cgctggattt atcatcgacg
     4141 ccaacccgca gtcagcgaaa attgcgacat tatctgccag caataatggt gtgctcgcca
     4201 atgagaatgc agcaaacacc gtctcggtca atgtcgctga tgaaggaagc aacccaatca
     4261 atgatcatac cgtcacgttt gcggtattaa gcggatcggc aacttccttt aacaatcaaa
     4321 acaccgcaaa aacggatgtt aatggcctgg cgactattga tctgaaaagt agtaagcagg
     4381 aagacaacac ggttgaagtc acccttgaaa atggcgtgaa acaaacgtta atcgtcagtt
     4441 ttgtcggcga ctcgagtacc gcacaggttg atctgcagaa gtcgaaaaat gaagtggtcg
     4501 ctgacggcaa tgacagcgcc acaatgaccg cgacagttcg ggatgcaaaa ggcaacctgc
     4561 tcaatgacgt caaggtcacc ttcaatgtta attcagcagc agcgaaactg agccaaaccg
     4621 aagtgaatag ccacgacggg atcgccacag ctacgctgac cagtttgaaa aatggtgatt
     4681 atacggttac ggcctctgtg agctctggtt ctcaggctaa tcaacaggtg aattttatcg
     4741 gtgatcaaag tactgcagcc ctgaccctca gtgtgccttc aggtgatatc accgtcacca
     4801 acacagctcc gcaacatatg actgcaacct tgcaggataa aaatggcaac ccactaaaag
     4861 ataaagaaat caccttctct atgccaaacg acgtcgcaag tcggttctcg attagcaacg
     4921 gcggaaaagg catgacggat agtaacgggg ttgcaatcgc ctccctgacc ggcacgttag
     4981 cgggcacgca tatgatcacg gctcgtctgg ctaacagcaa tgtcagcgat gcacagccaa
     5041 tgacgtttgt ggcggataaa gacagagcgg ttgtcgttct acaaacatcg aaagcggaaa
     5101 tcattgggaa tggcgtggat gagacgaccc tgacagcaac agtgaaagat ccttttgata
     5161 acgtggttaa aaatctgtca gtagtcttcc gcacctcccc cgcagacacg caactgagtc
     5221 tgaacgcgcg taatactaat gagaacggta ttgctgaagt tacccttaag ggcacggttt
     5281 tgggtgttca tacagccgaa gccatactgc ttaacggcaa cagagatacg aagatagtca
     5341 atattgcgcc cgatgccagc aacgcgcagg tcaccctgaa catccctgca caacaggtgg
     5401 tgacgaataa cagcgacagc gtgcagctga cggcgacggt gaaagatccg tcgaatcatc
     5461 cggtggcggg aataacggtg aacttcacca taccacagga cgtggcggca aactttaccc
     5521 ttgaaaataa cggtattgcc atcactcagg ctaatggcga agcgcatgtc accctcaaag
     5581 gcaaaaaagc gggcacgcat acggttaccg caacgctggg taacaataat gccagcgatg
     5641 cgcaaccagt caccttcgtg gcggataagg acagcgcggt tgtcgttctg caaacatcga
     5701 aagcggaaat cattgggaat ggcgtggatg agacgactct gacggcaaca gtgaaagatc
     5761 cttttgataa cgcagtaaaa gatctacagg tcaccttcag taccaacccc gcagatactc
     5821 aacttagtca gagcaaaagc aatactaacg acagtggtgt ggccgaagtt acctttaagg
     5881 gcacggtttt gggtgttcat acagccgaag ccacactgcc taacggcaac aacgatacga
     5941 agatagtcaa tattgcgccc gatgccagca acgcgcaggt tacgctgaac atccctgctc
     6001 aacaggtggt gacgaataac agcgacagcg tgcagctgac ggcgacggtg aaagatccgt
     6061 cgaatcatcc ggtggcggga ataacggtga atttcaccat gccacaggac gtggcggcaa
     6121 actttaccct cgaaaataac ggtattgcca tcacccaggc caatggggaa gcgcatgtca
     6181 cgctcaaagg taaaaaagcg ggtacgcata cggttaccgc aacgctgagt aataacaata
     6241 ccagtgattc acagccggta acgtttgtgg cggacaaaac ctcggctctg gttgttcttc
     6301 agatatcaaa aaatgagatc acaggtaatg gcgtagatag cgcaacgcta actgcaacag
     6361 tcaaagatca gttcgacaat gaggtgaaca atcttccggt aacattcagc acagcttctt
     6421 caggcctcac cctgacccca ggggaaagta ataccaatga gtctggcatc gcgcaggcca
     6481 ctctcgcagg cgttgccttt ggtgagcaga cggttactgc atcactggct aatactggtg
     6541 ccagcgacaa caaaactgtg cactttattg gcgacacaac ggcggcaaaa attatcgagt
     6601 tgacgcctga cccaggcagc ataatcgccg gtaccccaca gaacagcacc ggtagcgtaa
     6661 tcaccgctac agtcattgat aataatggct ttccggtgaa aggtgtgact gtgaacttca
     6721 ccagcaacgc agcgacagcc gaaatgacga atggcggcca agccgtaacg aacgaacagg
     6781 gtaaggctac cgtcacttat accaataccc gctcctcgat agaatcagga gcgagaccgg
     6841 ataccgttga ggccagtctg gaaaatggta gctccacgct tagcacatca attaatgtca
     6901 acgctgatgc gtctacggca catctcacct tgttacagtc acttcttgat acagtctccg
     6961 caggcgacac taccaatctg tatattgagg tgaaggataa ttacggcaac ggtgtacccc
     7021 agcaggaggt aaccctcagc gtttcaccaa gtgaaggcgt gactcccagt aataacgcta
     7081 tatatacgac caatcacgac ggcaattttt acgcaagctt taccgctaca aaagccgggg
     7141 tttatcaagt gacggcaacc ctcgaaaatg gcgattcgat acaacaaaca gtgacctatg
     7201 tgccgaacgt cgcgaatgcc gaaatcacgc tggcagcctc gaaggatccg gtgattgccg
     7261 acaataacga tctcacgaca ctaacagcaa cagtcgctga tacagagggc aatgcgatag
     7321 ccaacactga agtaacattt actctgccgg aagatgtgaa ggcgaacttc acgctgagcg
     7381 atggcggtaa agcgattact gatgctgaag gcaaagcgaa agtcacgctg aaaggtacaa
     7441 aagcaggcgc tcatactgtt acagcatcga tgactggcgg taagagtgag cagttggtgg
     7501 tgaactttat tgcggatacg ctcagtgcgc aggttaatct taacgttacc gaggacaact
     7561 ttatcgccaa taacgttggg atgaccacac ttcaggcaac agtgactgat ggaaacggca
     7621 acccgttagc caatgaggcg gtgacattca cgctaccggc agacgtgagc gcaagcttca
     7681 ctctcggaca aggcggttcc gccattactg atatcaacgg caaggctgaa gttacactga
     7741 gcggtacaaa atccggtacc taccccgtga cagttagcgt gaacaattat ggtgtcagtg
     7801 atacgaaaca ggtgactttg attgccgatg ctggtaccgc aacactagcc tccttaacct
     7861 ctgtatactc attcgtcgtc agcacgaccg agggcgcgac catgactgca agcgtcactg
     7921 acgctaacgg caacccggta gaaggcataa aagttaattt ccgcggaacc tccgtcacgc
     7981 taagcagcac cagcgttgaa acggatgatc agggtttcgc tgaaattctt gtgacaagca
     8041 ccgaagtcgg actgaaaaca gtttcagcct ctctgacaga taaacctact gaagtcatat
     8101 cgcgattact gaatgcaaaa gcagatatta attctgcaac gattaccagt ctggagatac
     8161 ctgaaggtca gctaatggtc gcacaagacg tagcagttaa agctcacgtc aacgaccagt
     8221 ttggcaaccc gattcttaat gaatctgtaa cattcagtgc agagccacca gagcacatga
     8281 ccatcagcca aaatattgtc tctactgata cgcatggtat agccgaggtc tccatgacgc
     8341 ccgaaagaaa cggttcgtat atggtgaaag catccctggc gaatggagcc tcacttgaga
     8401 aacaactgga ggctattgat gaaaaactga cactcacggc gtccagtccg cttatcggtg
     8461 tctatgcccc tacaggcact actctgacgg caacgctaac ctctgcaaat ggcactccag
     8521 tggagggtca ggtcatcaac tttagcgtaa cgccagaagg ggcgacgtta agtggcggaa
     8581 aagtgagaac taactcttca ggtcaggctc cggtcgttct gaccagcaat aaagtcggta
     8641 catatacggt gactgcatcg ttccataacg gcgtaacaat acagacacag acaaccgtga
     8701 aagtcactgg caactcaagc accgcacatg ttgctagctt tatcgctgat ccatcgacta
     8761 tcgccgccac caacagtgat ttaagtacct taaaggcaac ggttgaggat ggcagtggta
     8821 acctgatcga aggtctcact gtgtacttcg ccttaaaaag cggctctgcc acattaacgt
     8881 cattaacagc ggtgaccgat caaaacggaa tcgcgacaac aagcgtgaaa ggagcgatga
     8941 caggtagcgt cacggtaagc gcagtcacga ccgctggtgg aatgcaaaca gtagatataa
     9001 cgctggtggc aggcccggca gacgcctcgc agtccgtcct taagaaaaat cggtcctcac
     9061 tgaaagggga ctttaccgat agtgctgagc tacatcttgt tttgcacgat atatcaggca
     9121 atccgatcaa agtttctgaa gggatggaat ttgtgca
//
LOCUS       DADMHC010000159         9131 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.162, whole genome shotgun sequence.
ACCESSION   DADMHC010000159 DADMHC010000000
VERSION     DADMHC010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9131)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9131)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9131
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.162"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            52..936
                     /locus_tag="JNZ57_003140"
     CDS             52..936
                     /locus_tag="JNZ57_003140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707334.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-hexose-6-phosphate mutarotase"
                     /protein_id="HAY8829258.1"
                     /translation="MIKKIFALPVIEQISPVLSRRKLDELDLIVVDHPQVKASFALQG
                     AHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLP
                     WTLKSHHEDADGVALTFELTQSEETKKFCPHDFTLLAHFRVGKTCEIDLESHGEFETT
                     SALHTYFNVGDIAKVSVSGLGDRFIDKVNDAKEDVLTDGIQTFPDRTDRVYLNPQDCS
                     VINDEALNRIIAVGHQHHLNVVGWNPGPALSISMGDMPDDGYKTFVCVETAYASETQK
                     VTKEKPAHLAQSIRVAKR"
     gene            complement(987..1841)
                     /gene="yeaE"
                     /locus_tag="JNZ57_003141"
     CDS             complement(987..1841)
                     /gene="yeaE"
                     /locus_tag="JNZ57_003141"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal reductase YeaE"
                     /protein_id="HAY8829259.1"
                     /translation="MQQKMIQFSGDVSLPAIGQGTWYMGEDASQRKTEVAALRAGIEL
                     GLTLIDTAEMYADGGAEKVVGEALTGLRDNVFLVSKVYPWNAGRQKAINACEASLCRL
                     NTDYLDLYLLHWSGSFAFEETVAAMEKLIAQRKIRRWGVSNLDYADMQELWQLPGGNQ
                     CATNQVLYHLGSRGIEYDLLPWCQQQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHA
                     HNISSAQVLLARVISHQGVMAIPKAATIAHVQQNAAVLEVELSSAELTMLDKAYPAPK
                     GKTALDMV"
     gene            complement(1931..2677)
                     /locus_tag="JNZ57_003142"
     CDS             complement(1931..2677)
                     /locus_tag="JNZ57_003142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MltA-interacting protein"
                     /protein_id="HAY8829260.1"
                     /translation="MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDT
                     DVYPVPVINYEGDNFWFRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHL
                     DDRKSTMMAGLSYAHFTQYGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGI
                     GVQWNSENQNEYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTAR
                     YTRLSDEVTDSPMVDKSWTGLISTGITYKF"
     gene            3113..5046
                     /gene="yeaG"
                     /locus_tag="JNZ57_003143"
                     /pseudo
     CDS             3113..5046
                     /gene="yeaG"
                     /locus_tag="JNZ57_003143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310519.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase YeaG"
     gene            5159..6442
                     /locus_tag="JNZ57_003144"
     CDS             5159..6442
                     /locus_tag="JNZ57_003144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeaH/YhbH family protein"
                     /protein_id="HAY8829261.1"
                     /translation="MTWFIDRRLNGKNKSMVNRQRFLRRYKAQIKQSISEAMNKRSVT
                     DVDSGESVSIPTEDISEPMFHQGRGGLRHRVHPGNDHFVQNDRIERPQGGGGGSGSGQ
                     GQASQDGEGQDEFVFQISKDEYLDLLFEDLALPNLKQNQQRQLTEYKTHRAGYTANGV
                     PANISVVRSLQNSLARRTAMTAGKRRELHALEENLAIISNSEPAQLLEEERLRKEIAE
                     LRAKIERVPFIDTFDLRYKNYEKRPDPSSQAVMFCLMDVSGSMDQSTKDMAKRFYILL
                     YLFLSRTYKNVEVVYIRHHTQAKEVDEHEFFYSQETGGTIVSSALKLMDEVVKERYNP
                     AQWNIYAAQASDGDNWADDSPLCHEILAKKLLPVVRYYSYIEITRRAHQTLWREYEHL
                     QSTFDNFAMQHIRDQDDIYPVFRELFHKQNATAKD"
     gene            6589..8064
                     /locus_tag="JNZ57_003145"
     CDS             6589..8064
                     /locus_tag="JNZ57_003145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HAY8829262.1"
                     /translation="MIQSTRISMGLFFKYFLSLTKIDPGQNYISLPSIKSSTHIALLF
                     MVSMGTQKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNA
                     VIFLFMLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVS
                     IFYIFRQLSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVFPLLAHNLSSYN
                     ADYSLYVVDYCPDNHTATRGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLA
                     SLCCNLLLLTLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLT
                     NIYNRRYFFNSVESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQ
                     QSIRPDDILARLEGEVFGLLFTELNSAQAKIIADRIRKNVELLTGFSNRYDVPEQMTI
                     SIGTVFSTGDTRNISLVMTEADKALREAKSEGGNKVIIHHI"
     gene            8158..8244
                     /locus_tag="JNZ57_003146"
                     /pseudo
     CDS             8158..8244
                     /locus_tag="JNZ57_003146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001459804.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            8245..9131
                     /locus_tag="JNZ57_003147"
                     /pseudo
     CDS             8245..9131
                     /locus_tag="JNZ57_003147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416300.2"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
BASE COUNT         2404 a         2189 c         2116 g         2422 t
ORIGIN      
        1 cttcggtcgc tctttttttt acctgataaa atgaagttaa aggactgcgt catgattaag
       61 aaaatttttg cccttccggt catcgaacaa atctcccctg tcctctcccg tcgtaaactg
      121 gatgaactgg acctcattgt ggtcgatcat ccccaggtaa aagcctcttt tgcattacag
      181 ggcgcacacc ttctctcgtg gaaacctgcg ggtgaagaag aagttctgtg gttgagcaac
      241 aacacaccgt tcaaaaatgg cgtcgctatt cgcggtggcg taccggtttg ctggccgtgg
      301 tttggtccgg cggcacaaca aggtctgcct gcgcacggtt ttgcccgcaa cctgccgtgg
      361 acgctgaaat cacatcatga agatgctgat ggcgtagcgc tgacttttga attgacgcaa
      421 agcgaagaga cgaaaaaatt ctgtccgcac gactttacgc tgttagcgca tttccgcgtg
      481 ggtaaaacct gtgaaatcga tcttgaatca catggcgaat ttgaaaccac ctctgccctg
      541 catacctact ttaacgtggg tgatatcgct aaggtaagcg tcagtgggct gggcgatcgc
      601 ttcattgata aagtgaatga cgcgaaagaa gatgtactga ccgacggtat tcagaccttc
      661 cctgaccgta ccgatcgcgt gtatctgaat ccgcaagatt gcagcgtgat taatgatgaa
      721 gcgctgaatc gtattatcgc cgtaggccac cagcatcatc tgaacgttgt aggctggaac
      781 ccgggaccgg cgctttcaat tagtatgggc gatatgccgg atgatggcta caaaacattt
      841 gtttgtgtag aaacggctta cgcttcagaa acgcaaaaag tcaccaaaga gaaacctgca
      901 catctggcgc aatccattcg cgttgcgaaa cgttaatttg cgttaatgtt gtgtgccggg
      961 tgcgatgcat ccggcacgta tcaacatcac accatatcca gcgcagtttt tccttttggt
     1021 gccggatacg ctttatccag catggttaat tccgctgacg aaagttcgac ctcaagcaca
     1081 gccgcattct gttgaacatg ggcaatcgtg gccgcttttg gaatcgccat cacaccctga
     1141 tggctgatta ccctcgccaa caatacttgt gccgagctga tattgtgagc atgtgcaatt
     1201 tcgttgacta ccgcgttttt taacagtcca ttgcgcaacc gcccggcctg ggctaatgga
     1261 ctgtaagcca tcaccggcat ctgctgttgc tggcaccagg ggagtagatc gtactcaatc
     1321 cctcgtgaac cgagatggta aagcacctga ttagtggcac actgatttcc ccccggcagc
     1381 tgccagagtt cctgcatatc agcataatca aggttagaaa cgccccagcg gcggattttt
     1441 ctctgggcga tcaatttttc catcgctgca acagtctctt caaaagcgaa actgccagac
     1501 cagtgtaata agtagagatc gagataatca gtattgagac ggcataaact ggcttcgcat
     1561 gcatttatcg ctttttgcct gccagcattc cacggataga ctttagagac gagaaagacg
     1621 ttatcacgca gaccggttaa tgcttcccca accacctttt cggcaccgcc atcggcatac
     1681 atttcggcgg tatcaatgag ggttaaaccg agctcaatgc ccgcgcgtag tgcagcaact
     1741 tctgttttgc gctgactggc atcttcgccc atataccatg ttccctgccc tatggctggc
     1801 agtgagacat cgccactaaa ttgaatcatt ttttgttgca ttgtttcctc ccaggtattg
     1861 caccaccgta atgcaaaaca aggcgtgacg ccctgttttt atgcacaaaa tgccctggaa
     1921 agatgcatta tcagaatttg taggtgatcc cggtagaaat caggccagtc caggatttat
     1981 ccaccatcgg gctgtcagta acttcatcag acagacgggt atagcgcgcg gtaccgtaaa
     2041 cactccagtc gccgaggaag ttgtagctgg cgctcagctc caggtaaggg ctccagctgt
     2101 cgttcgggtt atagccacgc agaccgctgc gagcggactc tttgcgcgat acgccataat
     2161 agtattcgtt ctggttttcg ctgttccact gcacaccaat acccggagtc acggtcaggc
     2221 caccgttggt gtaacgatac aaccaggcca tatcccagac aatgccgttg ctgttatcca
     2281 gggtatcgcc agccagggtg gtacgcaggt aaccgtactg ggtaaagtga gcataagaca
     2341 gaccagccat catggtgctc ttacggtcat ccaggtgacg catttggtga tcgccactgt
     2401 ctttcgcttt gaagtaaagc ggcgaccagt aagcggtaat tgaaagttta tctgttgcgt
     2461 cattccacag gtagtaacca ccacctaagc cacggaacca gaagttatcg ccttcatagt
     2521 tgattaccgg tactgggtaa acatcggtat cgtaatcttt atatgggtgc tcaacgacac
     2581 ctacgcctgc gcccaaggaa aatttacctt cagcgtgcgc tacgcctgca gacgttgcga
     2641 taagcactcc aagtgccaga agtttgagtt tggtcacaat taatcattcc ttaaacaaat
     2701 gtttagcggg cgacaaagtt tacccgtcaa tacatcgaaa cccaaccttt ttacgttttc
     2761 attttttaaa gtaactgttt aattttcctg ccgcggatga caccgcgctt acagccaaat
     2821 gaatttagcg ttactggcga gcctggtctt tacattaatt atgcaaaatt tatggatgag
     2881 ttgttgatat gccattgaaa ttaagaaagc cgtgcaggca agttttccat ttgccatcta
     2941 cgcttaattt tgaaggtgta tcaccgggca cgttgttctc atcgtcgata aaatggcatg
     3001 agagttgctg tgttttagca agagacgtcg ttcagtttac ctcttccggg agcctctact
     3061 attcatatga acggctctta acctgtgcta aaaaacgaaa ggacggcata ccatgaatat
     3121 attcgatcac tatcgccagc gatatgaagc tgccaaggac gaagagttca cactgcagga
     3181 gtttcttacc acttgtcggc aagatcgcag tgcttatgcc aacgcggctg agcggctatt
     3241 gatggctatc ggtgagcctg tcatggtcga tacagcccag gaacccagac tttctcgact
     3301 cttttctaac cgggtcattg cacgttatcc ggcgtttgaa gagttttacg gcatggaaga
     3361 cgcgattgaa cagattgtct cttatctgaa acacgcggct caggggctgg aagagaagaa
     3421 acaaatcctg tatctgctgg ggcctgtggg tggggtaaat catcgcttgc tgagcgactg
     3481 aaatcattaa tgcagctcgt accgatttat gtattgagcg ccaacggtga gcgtagcccg
     3541 gtcaacgatc atccgttctg tcttttcaat ccgcaggaag atgcgcagat tctggaaaaa
     3601 gagtatggca ttcctcgccg ttatctcggc accatcatgt cgccgtgggc ggcaaaacgc
     3661 ctgcatgaat ttggtggcga tatcactaag ttccgggtag tgaaggtctg gccgtcaatt
     3721 ctgcaacaaa ttgctatcgc caaaacggaa cccggcgatg agaacaacca ggacatctcc
     3781 gcgctggttg ggaaagtcga tattcgtaaa ctcgaacact acgcgcagaa tgacccggac
     3841 gcctacggct attccggtgc gctgtgccgc gccaatcagg ggatcatgga attcgttgag
     3901 atgtttaaag caccgataaa agtgctgcat cccttgttaa ccgccactca ggaaggtaac
     3961 tacaacggga cggaaggtat ctccgccctg ccgttcaacg ggattattct cgcccactcg
     4021 aacgagtccg aatgggtcac tttccgtaat aacaaaaaca acgaagcctt cctcgaccgt
     4081 gtttacatcg tgaaggtgcc gtattgcttg cgcatttccg aagagatcaa aatctacgag
     4141 aaattgctta atcacagtga attgactcac gccccatgcg cccctggcac gctggaaaca
     4201 ctgtcacgtt tttccattct ttcgcgcctg aaagagccag aaaactccag catttattca
     4261 aagatgcggg tttatgatgg cgaaagtctg aaagacaccg atcccaaagc caagtcgtat
     4321 caggaatatc gtgactacgc cggtgtcgat gaagggatga acggtctgtc gacgcgtttt
     4381 gcgtttaaga tcctctcccg cgtgttcaac ttcgatcatg tagaagtggc ggcaaacccg
     4441 gtccatctgt tctacgtcct ggaacagcag atcgagcgcg agcagttccc gcaagagcag
     4501 gcagaacgct atctggagtt cctgaaaggt tatctgatcc cgaaatatgc cgagtttatc
     4561 ggcaaagaga tccagacggc ctaccttgaa tcctattccg aatatgggca aaacattttc
     4621 gaccgttatg ttacctacgc ggatttctgg attcaggatc aggagtatcg cgatccggat
     4681 accgggcagc tgtttgaccg cgagtctctt aacgccgagc tggagaaaat cgagaaaccg
     4741 gcggggatca gtaatccaaa agatttccgc aacgagattg ttaacttcgt actgcgcgcc
     4801 agagcgaata acagcggacg caatccgaac tggaccagct atgaaaaact gcgcacggtt
     4861 atcgagaaga aaatgttctc caataccgag gagctgttgc cggttatctc gtttaacgcc
     4921 aaaacgtcaa ccgacgagca gaagaaacac gacgactttg tcgaccgtat gatggaaaaa
     4981 ggctacaccc gtaaacaggt gcgtttactg tgcgaatggt atttgcgcgt acgtaaatcg
     5041 tcttaacaac cctggcccgg tacacatgct accgggccta caacgacagc gaaccgtggg
     5101 ccagagaaat ggcaacacag gcgtagcata cagttggcaa atgtagtacg gggggcatat
     5161 gacctggttt attgaccggc gtctgaacgg caaaaacaaa agcatggtga atcgccagcg
     5221 ttttttacgc cgttataaag cgcaaattaa acagtcgatc tccgaggcca tgaataagcg
     5281 ttcggtgact gacgtagaca gcggcgaatc cgtatccatt cccacggaag atattagcga
     5341 accgatgttt catcaggggc gtggcggcct gcgccaccgc gtacatccgg gcaatgacca
     5401 tttcgtccag aacgaccgaa ttgaacgtcc ccagggtggc ggcggaggtt ccggcagtgg
     5461 tcagggccag gccagccagg atggtgaagg tcaggatgaa tttgtctttc agatttcgaa
     5521 agatgagtat cttgatctgc tctttgaaga tttggcctta ccgaatctga aacaaaacca
     5581 acaacgccag ctgaccgaat ataaaacgca tcgggcgggt tataccgcta acggcgttcc
     5641 agccaatatc agcgttgtgc gttccttgca gaactcactg gcgcgacgca cagccatgac
     5701 ggcgggcaag cgacgggaac ttcatgcgct ggaagagaat ttggccatca tcagcaacag
     5761 tgaacctgcg caactgctgg aagaggaacg tctgcgcaaa gaaattgcag aattacgtgc
     5821 caaaattgaa cgcgtccctt ttattgacac cttcgattta cgttacaaga actacgagaa
     5881 gcggcccgat ccctccagcc aggcagtgat gttttgcctg atggacgttt ccggttcaat
     5941 ggatcaatcc actaaagata tggctaagcg tttttatatt ctgctgtatc tgttcctcag
     6001 cagaacgtat aagaacgtgg aagtcgtata catccgccat catacccaag cgaaagaagt
     6061 cgatgaacat gagtttttct actcgcagga aacaggcggc accattgttt ccagcgccct
     6121 gaaactgatg gatgaggtag tgaaagagcg ttataacccg gcacagtgga atatttacgc
     6181 tgcacaagca tcggacggcg ataactgggc cgatgactct ccgctttgcc atgaaatcct
     6241 ggcgaaaaaa ttattacctg ttgttcgtta ttacagctat atcgaaatta cccgtcgtgc
     6301 acatcagaca ttgtggcgag aatatgagca tctgcaatct actttcgaca actttgcgat
     6361 gcagcacatc cgcgaccagg atgatattta tccggtgttc cgtgaactgt ttcataaaca
     6421 aaatgcaaca gctaaagact aaaactatca gccaggtcat tatcgcctgg ctgattttta
     6481 gcttactgta aattatctca tttattacat acattagctt acaatcgctt taaatatgac
     6541 agcataacct ttacataatt tagttccaga aaacaatcat tcggaaaaat gattcagtca
     6601 acacgtattt ccatggggtt attctttaaa tattttttat cgttgacgaa aattgatcct
     6661 ggtcaaaact atatatctct gccatcaata aaatccagca ctcacattgc tctccttttt
     6721 atggtttcta tgggtacaca aaaattaaaa gctcaaagct tttttatttt cagtttattg
     6781 ctgacattaa ttttattttg cattactacc ttatataacg aaaacacaaa tgtaaaactc
     6841 atcccacaga tgaattacct gatggttgtt gtggctttgt ttttccttaa cgccgtcatt
     6901 tttcttttca tgttaatgaa atatttcact aacaaacaaa ttttaccaac actcatttta
     6961 agccttgcat tcttaagtgg ccttatctat ttagttgaaa ccattgtaat tatccataaa
     7021 ccaattaacg gcagtacact gatccagaca aagtcgaatg atgtttctat tttctatatt
     7081 ttccgccaac tcagttttat ttgtttaacc tcgctggcac tcttttgtta tggaaaagac
     7141 aacatccttg acaacaataa gaaaaaaacg ggaatcctgt tgctggcgtt gattcctttt
     7201 ttagtttttc cccttctggc acacaatctg agcagttata acgctgacta ttctttgtat
     7261 gtcgtcgact actgtccgga caaccatact gcgaccaggg gaatcaacta tacaaaaata
     7321 ttggtttgtc tgtgggcatt tttactgttc tttattatca tgcgtacacg attagccagc
     7381 gaactatggc cgttaatagc attattatgt ctggcatcgc tatgctgcaa cttacttcta
     7441 ctgactctgg atgagtataa ttacaccatc tggtatatca gtcgcgggat tgaagtttcc
     7501 agtaaactgt ttgttgtgtc ttttctgatt tataacattt ttcaggagct gcaactctcc
     7561 agcaaactgg cagttcatga tgtgctgacc aatatttata atcggcgcta ctttttcaac
     7621 agcgtagagt cattattgtc gcgacctgtt gttaaggact tctgtgtcat gctggttgat
     7681 attaatcagt tcaaacgcat caatgcccaa tggggacatc gtgtgggtga taaagtgctg
     7741 gtttcaattg tcgatattat ccagcaaagc atccgccctg atgatatttt agcgcgactg
     7801 gagggtgagg tgtttggctt gctatttacc gaactcaata gtgcccaggc aaaaatcatt
     7861 gcggatcgta tacgtaaaaa tgtcgaactc ctgaccggct ttagtaacag atatgatgtt
     7921 cctgaacaaa tgaccatcag tattggcacg gttttttcaa cgggtgacac gcgtaatatc
     7981 tcgcttgtca tgacggaagc agataaagcc ttacgcgaag cgaaaagcga ggggggcaac
     8041 aaagtgatta ttcatcatat ttaagtgcaa aaatattcag agccatgctt tttgcgtggc
     8101 ttttgcatac aatttattac tattacccct aaatttcccc tccccagcgg cgcagagatg
     8161 agtataatta gcgcccctgt gccaggccgc aatcgaactt tatctggttt tctcgtttca
     8221 ctaaccgaag gagtgccatt tatcatgaaa ttgcaccata gaatgctccg gcattttatc
     8281 gccgcaagtg tcattgtgct gacatcttcc ttccttattt ttgaacttgt cgccagcgac
     8341 agagcaatga gtgcctatct gcgctatatc gtgcagaaag cagactcctc ctttctttat
     8401 gataagtatc agaatcagag tattgccgcg catgtgatgc gcgctctcgc tgctgagctg
     8461 tcggaagtgt cgccagaaca gcggcgcgcc atctgcgagg cttttgagtc tgccaataat
     8521 acccatggct taaacctgac tgctcataaa tacccgggct tacgcggcac actacaaacc
     8581 gcatccactg actgcgacac aattgtggaa gctgcagcac tattacccgc ttttgatcag
     8641 gcagtggaag gcaaccgcca ctaggatgat tacggttcag gtcttgggat ggccgaagag
     8701 aaatttcact attatctcga tctcaatgac cgctatgtct atttttatga gccggttaat
     8761 gttgaatact ttgcgatgaa taactggtcc ttcctgcagt caggaagtat tggtatcgat
     8821 cgcaaagata ttgaaaaggt atttaccggg cgtaccgtat tgtcgagcat ttaccaggat
     8881 cagcgtacta aacagaacgt gatgagtttg ctgacgccgg tgtatgttgc agggcagcta
     8941 aaagggattg tgctgctgga tattaacaaa aacaatttgc ggaatatctt ttacactcat
     9001 gaccgccctc tcctctggcg ttttctcaat gtcacgctaa ccgataccga ttcggggcgc
     9061 gacattatca tcaaccagag cgaagataat ctgttccagt atgtcagtta cgtccatgac
     9121 ttaccgggcg g
//
LOCUS       DADMHC010000160         9084 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.163, whole genome shotgun sequence.
ACCESSION   DADMHC010000160 DADMHC010000000
VERSION     DADMHC010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9084)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9084)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9084
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.163"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            15..768
                     /gene="yfaU"
                     /locus_tag="JNZ57_003148"
                     /pseudo
     CDS             15..768
                     /gene="yfaU"
                     /locus_tag="JNZ57_003148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311157.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxy-L-rhamnonate aldolase"
     gene            complement(809..1711)
                     /locus_tag="JNZ57_003149"
     CDS             complement(809..1711)
                     /locus_tag="JNZ57_003149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000156133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HAY8829263.1"
                     /translation="MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQT
                     LRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAA
                     MQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDIT
                     IVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQ
                     CGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLE
                     QGIDRDQVLAATQLSEADLAANNH"
     gene            complement(1904..3094)
                     /gene="glpC"
                     /locus_tag="JNZ57_003150"
     CDS             complement(1904..3094)
                     /gene="glpC"
                     /locus_tag="JNZ57_003150"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic glycerol-3-phosphate dehydrogenase
                     subunit C"
                     /protein_id="HAY8829264.1"
                     /translation="MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLK
                     DGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMG
                     SVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYK
                     DQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQ
                     AITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWR
                     KLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAG
                     TYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLA
                     QALA"
     gene            complement(3091..4350)
                     /gene="glpB"
                     /locus_tag="JNZ57_003151"
     CDS             complement(3091..4350)
                     /gene="glpB"
                     /locus_tag="JNZ57_003151"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708132.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase subunit GlpB"
                     /protein_id="HAY8829265.1"
                     /translation="MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGS
                     LDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQL
                     QGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLR
                     ELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMI
                     LMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPG
                     DEVKKVTCKNGVVNEIWTRNHADIPLRPHFAVLASGSFFSGGLVAERNGIREPILGLD
                     VLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIA
                     QGCGGGVCAVSALHAAQQIAQRAGGQQ"
     gene            complement(4340..5968)
                     /gene="glpA"
                     /locus_tag="JNZ57_003152"
     CDS             complement(4340..5968)
                     /gene="glpA"
                     /locus_tag="JNZ57_003152"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic glycerol-3-phosphate dehydrogenase
                     subunit A"
                     /protein_id="HAY8829266.1"
                     /translation="MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIAT
                     GATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLS
                     FQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLD
                     AKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAE
                     YADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYN
                     EIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIV
                     LLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEP
                     AEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVEN
                     LNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKG
                     VQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL"
     gene            6241..7599
                     /gene="glpT"
                     /locus_tag="JNZ57_003153"
     CDS             6241..7599
                     /gene="glpT"
                     /locus_tag="JNZ57_003153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012131518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate transporter"
                     /protein_id="HAY8829267.1"
                     /translation="MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLV
                     RKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL
                     AAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSV
                     WNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLP
                     PIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWS
                     PTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTI
                     ATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFG
                     YLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRN
                     GG"
     gene            7604..8680
                     /gene="glpQ"
                     /locus_tag="JNZ57_003154"
     CDS             7604..8680
                     /gene="glpQ"
                     /locus_tag="JNZ57_003154"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HAY8829268.1"
                     /translation="MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLP
                     EHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRY
                     YAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNH
                     STGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRI
                     KNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADG
                     IGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDAL
                     YNKAGVNGLFTDFPDKAVKFLNKE"
     gene            complement(8722..8964)
                     /locus_tag="JNZ57_003155"
                     /pseudo
     CDS             complement(8722..8964)
                     /locus_tag="JNZ57_003155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311149.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
BASE COUNT         2103 a         2240 c         2484 g         2257 t
ORIGIN      
        1 tacgcaaggg cgaagtgcaa attggtctgt ggttaagctc gactacttct tatatggcag
       61 aaattgccgc tacttccggt tatgactggt tgctgattga cggggagcac gcgccaaaca
      121 ccattcagga tctttatcac cagctacagg cggtagcgcc ctatgccagc caacccgtga
      181 tccgtccggt ggaaggcagt aaatcgctga ttaaacaagt tctggatatt ggcgcgcaaa
      241 ctctattgat cccgatggtc gatactgccg atcaggctcg tcaggtggcg tctgccacgc
      301 gctatcctcc ctacggtgag cgtggtgttg gggccagtgt ggcacgggct gcgcgctggg
      361 gacgcattga gaattacatg gcgcaagtca acgattcgct ttgtctgtta gtgcaggtgg
      421 aaagtaaaac ggcactggat aacctggacg agatcctcga cgtcgaaggg attgatggcg
      481 tgtttattgg accagcggat ctttctgcgt cgttgggcta cccggataac gccgggcacc
      541 cggaagtgca gcgaattatt gaaaccagca ttcggcggat ccgtgctgcg ggtaaagcgg
      601 ctggttttct ggctgtggct cctgatatgg cgcagcaatg cctggcgtgg ggagcgaact
      661 ttgtcgctgt tggcggttga cacgatgctc tacagcgatg ccctggatca acgactggcg
      721 atgtttaaat caggcaaaaa tgggccacgc ataaaaggta gttattgata tcaaaggccc
      781 atggggatcg gctgtgggcc tgtgttaatt agtggttatt cgctgccaga tcggcttcgc
      841 ttagctgggt ggccgcgagc acctggtcac gatcaatgcc ctgttccagc atgcgcaaag
      901 caattttaat ggcttgttca tgcatacctt cctgccagcc aatttgatgc ccttcctgcc
      961 gtagccgttc agcaatagtc attaatctct ccttttgtag tggtgaacgt tcggcaatct
     1021 cctcaataaa acgggtgaaa cgggaggtat cgccgcattg cagcagataa ttaaacagtg
     1081 tttgtagctg gctgtcatta gtgaagcctc taaccaaaag cgtggtgatc ctgtcgacca
     1141 tgccgattaa atcgcggtcg cgaatatgct tttgaatcag ttccagcaga gctatacgcc
     1201 gatgttgcat gatctcatcg tcaggtacga tggtgatatc caccaacgga aaagcttcgg
     1261 tgtacaactg ccgggcaagt tgcggatcgt caaactcatc cagccagtta agtgagtacg
     1321 ggtagggcga tgtttcgcca tgataaaaca gcaatggcac caccagcgga actctgtcat
     1381 agcctttatc caggtgacgc tgcatggcgg cagtggcata gcgcattagc cgaaaagcca
     1441 tattcttttc tgcagagctt tgatgttcaa tcacgcagta gatatagccg tcaccgtcgc
     1501 tggtttccac ggaccacaaa acatccgagt agtaagcgcg taaacttttt tcaataaaac
     1561 tagtgggttc caggcgtaag gtttgcaggt tgcaaagctt gcgcagtggt tctggtaaat
     1621 gtatttcgag aaaatcccgt gcggtttcgg gtgtgaacat aaaggtttta aataccgcat
     1681 catgcgggga ggaggttgtt gattcggtca tggttgtccg tcacctgata tttatgatga
     1741 cgcgacatta cggttatccc aggcctttga catctgccag tttcagcctt tgcgagacgt
     1801 tttcagagga attttcactg cgttgcaacg catacattgg gcacggaatc gtgtacgcaa
     1861 aaatgcccgg taaccacatg cttaccgggc atcagaaagg agtttaagcc agcgcctggg
     1921 ccagtagcgt aatcggatgt tcgcagcgaa gacttgtgga catctcaatc tgccatttac
     1981 aggtttcgca gtcggtgacc accagatctg cgccgctttc ttctatctgg cggaacagtg
     2041 gtgcgccgat ggcttgtgag gtggggtagt tctctttttt gaaaccgtaa gtacccgcaa
     2101 taccgcagca ctgggaatcc agcaccgtta actcaagccc cgggatttta cgcaacagct
     2161 ccagggtgta gagcgtccag cccatttttt ccatatggca cggagtgtga taaaccactt
     2221 tcagcggcag cggtttcagc ggtaacgttt tgccttcgtc cagcttgcgc cacagccagc
     2281 gggttgccag ttcgatatga tcgcgcaagc ctttgttgtc gacattcagc acttccgggt
     2341 attcgtcgcg cagggcaaat gtacaggttg aggaggtggc aatcaccgga atgcctttta
     2401 ctcccacagc ttcgcggatc gactctacat tcgtaattgc ctgtttgcgt gctttatcgg
     2461 taaagccgtt ggcgattagc ggtacgccgc agcatttttc tttgctgagc agttgtacac
     2521 cggtacccat tgcgttgagc actttaatta aatctttacc taactgcgga tggttgtagt
     2581 taacgaagca gccgtgaaag aaagcgacct ggtctttata ttgtgcttgc tgagccgcta
     2641 tgctgcgata ccagcgacgg aacgtgccga aggagtattt cggtagcgtg cgacgatgat
     2701 cgatttttaa cgccgcatca agcagctgcc gcaccggttt cagcgaggta gcggtgttga
     2761 cgattggtgc gaacggcgtg gaaacgctac ccatcaggtc ggtatgactc aacacaaaat
     2821 tacgcagcga cgggcgcgtg gtgtcatatt ttgcccgcgc gcgctggata atatcgccaa
     2881 tcttcacatc ggacgggcag gcgacttcac aacgtttgca gttgatgcaa tatttcagcg
     2941 cctcgtcata cagtgcgcca tctttcaaac gcagacgctc gccatccggc ccggcttgtt
     3001 ttggccctgg ataaccggga ttcacccggc tcaccgggca ggcggtggtg cagacggtgc
     3061 acttaatgca gttttcgaag ctggtgtcgt tcattgttgg cctcctgcgc gttgggcaat
     3121 ctgttgagcg gcatgtaaag cactgacggc acaaacaccg ccgccgcatc cctgggcgat
     3181 gggatcaaat ccgcccagca ccgaaccgat ggcaaacagg ttctcaatgg tttgccctgc
     3241 ctgcgacggg cgtagcgtct catcagtggt tacaccgaac tgctgccacg gttgcggcgc
     3301 aaaaaaatcg cccttatacc attcaccccg cgtggcggtt tgtagcacat caaggccgag
     3361 aatcggctcg cgaatgccgt tacgttccgc taccagtccg ccactaaaga aactgccgct
     3421 ggcgagaacc gcgaaatgtg gacgtagcgg aatatcggcg tgattgcggg tccagatttc
     3481 attcactacg ccatttttac aggtcacttt tttcacttca tcgcccggca tccacacgcc
     3541 accctggcgc acaaactggc gctgtaactg gttttgcaga cgaatgccca gcacggaagg
     3601 cggcagcgtt ggcaaaagca tcagtgaaca aggtagtttt tcattcaacc aacgccacag
     3661 tttgtcatcg gccaggccga agcaggcagg catcaggatc atttcgcagg tattggcgac
     3721 aggaataagc gcatcaagta acagcggcca gttttcttca ttatcaagga aacgggcgat
     3781 attcacagcg cgaaattcgg tggcgttatt gcgcaggaca tccagttccg gcagctctat
     3841 ttctgcggtt tcaaccgaaa gatccagttc gcgcaacgaa gccgccgcaa gatgcgcctg
     3901 aaaatccatc aggccgctta tcccgaccac acatattttc ttcgcgggca acggccagac
     3961 ggggacttct ggtgaactta gccaggtaga gcgcagagtg ccgagcggcg taatccgctg
     4021 gtgagccagt tctacgctgc cctgcaattg cgcaccgctt tcagcgatta atgcctgcgc
     4081 ctggcaagcg agatcgagca cgcgttgtgg cccgagaaga gagtaaggat gtgcaggtgc
     4141 ctgctgacgc aaagattcca gtccactgtg aatgtctgcc acgggttgac catctggcag
     4201 atggctcagc aaatccagcg aaccggatga gaaatgcaac gcgctttgac cacgcgtgac
     4261 aatggcacag cgcaggccgt gtttttgcag ttgcaggcca cagagtaatc cggcgaggcc
     4321 gccgcccata atgacagtat caaagcgcat ctttctgctc cttctccaga ccacacagtc
     4381 cctgataaac ccagcgggta aattcgcttt cgcgcagtgc gtctccccag gcgatgggtt
     4441 gcacgccttt ccagcgttcg ttaaggaagg tggaaagttg ctcgatagat tgcgcggacg
     4501 tcgtgacgtt aaaccgttgc agcagtccgg cagcgcggca ggcgcagagt tcgccctggc
     4561 aggtgcccat ccccacacgg gtacgacggc gtaaatccag caggctatta acgtttaaat
     4621 tttctaccgc gtactgcact tcacccgcag ttaccgcttc gcactcacat accaggctac
     4681 ggtgcagacg gccttcgctc agccaggcag gcgtgcgatc gccatgacga taaaccgcag
     4741 aaccgcgcag cggggcaggc agggagatga ctttacgcaa ggtaacttca gcgggttctt
     4801 gtgaaccagg cagtgccaga tcggcagtcg tacaggggcg cgtgttgccc agtttgcggc
     4861 ataccgcgtc ggtagcccat tcagccatca gccgataggt catcagtttg ccaccggtga
     4921 tggtgataaa tccgtccaga ccatcgcgtt cagcatggtc gagcagcacg atgccacggc
     4981 tgacgttacg tccgctcgga tcgtcatcgc tggcaaccag cgggcgcacg ccagaatagg
     5041 cccgcaaaat gcgcgttttc gccatcacgg gggccagttt ttccccttca cgcagcagaa
     5101 tatcaacctc ttctgccgtc actcgattat cgtcaatctc gttgtaatca atacgtaaag
     5161 aggtggtacc aatcagcgaa atggtatcgc caggcaccag aatatcggcg tcggaaggtt
     5221 tacggcagcg gttgatcaca tgctggttaa tgcggtgatc catgatcagc agcgatcctt
     5281 tcgccgggaa catgcgaatg cgcagatcgg catattcggc aatgtgttgc ccccagatcc
     5341 cagcggcatt aaccacgaca ggtgcatgaa gggcctgagt ttcgccggtg agatggttac
     5401 gtacacgaac accgcacacc gtcgcgcctt cacgaatcag ccccgtgact tcatgagcgg
     5461 taaggataac ggcaccgtgt tctttggcat ccagcatgtt tgctgcggtc agacgaaatg
     5521 gatcaacggt gccatccgga actttcaccg cgccaatcag tgccgggtta acggcaggtt
     5581 cgataatgcg cgcttgctgc gggtctatag cttctgcgct gatccctgct tcttcgcagg
     5641 cgcgaataaa agtggcctgg aatgagaggt catcttccgg cagggtgata aacaggccgt
     5701 tggttggttc aacgcagtga cgtgcaatgc gtttcaggat ctggttttca ctaatgcatt
     5761 cgcgggccga ttccgcatcg gttaccgcat agcgcgcacc gctgtgcagc aggccgtggt
     5821 tacgcccggt ggcaccggtt gcgatgtcgt ggcgctcaac caaaatcacg cgcagcccgc
     5881 gcagggcaca gtcgcgggca atcccggctc ccgttgcgcc gccgccaatg ataatcacgt
     5941 cacttgattg cgagtcgcga gttttcattg ttatccctct gaagttcgtt ttttaccatt
     6001 tagccatagt aaaaacatga attgtttgat ttcgcgcatg ttcgctcata attcgaaagt
     6061 gaaacgtgat ttcatgcgtc attttgaaca ttttgtaaat cttatttaat aatgtgtgcg
     6121 gcaattcaca tttaatttat gaatgttttc ttaacatcgc ggcaactcaa gaaacggcag
     6181 gttctctcac tgaatcaggc tgttaatcat aaataagacc acgggccacg gaggctatca
     6241 atgttgagta tttttaaacc agcgccacac aaagcgcgct tacctgctgc ggagatcgat
     6301 ccgacttatc gtcgattgcg ctggcaaatt ttcttgggga tattctttgg ctatgcggct
     6361 tactatttgg ttcgtaagaa ctttgcgctt gctatgcctt atctggtcga gcagggattc
     6421 tctcgcggtg atttaggttt cgcgctttcg gggatctcga tcgcttatgg attttcgaaa
     6481 ttcataatgg gttcggtatc agatcgctcg aatccgcgcg ttttcctccc cgcaggtttg
     6541 attctggcgg cggcagtgat gttgtttatg ggctttgtgc catgggcgac gtcgagcatt
     6601 gcggtgatgt ttgtactttt gttcctctgc ggttggttcc aggggatggg gtggccgccg
     6661 tgtggtcgta ctatggtgca ctggtggtcg cagaaagaac gtggcggcat tgtgtcagtg
     6721 tggaactgtg cgcacaacgt tggtggtggt attccgccgc tgctgttcct gctggggatg
     6781 gcctggttca atgactggca tgcggcgctc tatatgcctg ctttctgcgc cattctggtg
     6841 gcattattcg cctttgcgat gatgcgcgat accccgcaat cctgtggctt gccgccgatc
     6901 gaagagtaca aaaatgatta tccggacgac tataacgaaa aagcggaaca ggagctgacg
     6961 gcgaagcaaa tcttcatgca gtacgtactg ccgaacaaac tgctgtggta tatcgccatc
     7021 gccaacgtgt tcgtttatct gctgcgttac ggcatcctcg actggtcacc gacttatctg
     7081 aaagaggtta agcatttcgc gctggataaa tcctcctggg cctacttcct ttatgaatat
     7141 gcaggtattc cgggcactct gctgtgcggc tggatgtcgg ataaagtctt ccgtggcaac
     7201 cgtggggcaa ccggcgtttt ctttatgaca ctggtgacca tcgcgactat cgtttactgg
     7261 atgaatccgg caggtaaccc aaccgtcgat atgatttgta tgattgttat cggcttcctg
     7321 atctacggtc ctgtgatgct gatcggtctg catgcgctgg aactggcacc gaaaaaagcg
     7381 gcaggtacgg cagcgggctt taccgggctg tttggttacc tgggcggttc ggtggcggcg
     7441 agcgcgattg ttggctacac cgtggacttc ttcggctggg atggcggctt tatggtaatg
     7501 attggcggca gcattctggc ggttatcttg ttgattgttg tgatgattgg cgaaaaacgt
     7561 cgccatgaac aattactaca aaaacgcaac ggaggctaat ggcatgaaat tgacgctgaa
     7621 aaaccttagc atggcgatca tgatgagcac tatagtcatg ggaagcagtg caatggcggc
     7681 ggacagcaac gaaaaaatag tcatcgccca tcgcggtgcc agtggatatt tgccggagca
     7741 tacgctgcca gcaaaagcga tggcgtatgc gcagggagcg gattatctgg aacaggattt
     7801 ggtgatgacc aaagacgacc atctggttgt tctgcatgac cattatctcg atcgtgttac
     7861 tgatgttgcc gatcgtttcc cggatcgggc gcgcaaagac ggtcgttact acgcgataga
     7921 tttcacgctg gatgaaatta agtcgttgaa atttaccgaa ggtttcgata ttgaaaacgg
     7981 taaaaaagtg cagacttatc cggggcgttt cccaatgggt aagtccgact tccgggtgca
     8041 cacctttgaa gaagagattg aatttgttca ggggttaaat cactctaccg ggaaaaatat
     8101 cggtatttat ccagaaatca aagcgccgtg gttccatcat caggaaggga aggatattgc
     8161 ggcaaaaacg ctggaagtgc tgaagaaata tggttacacc ggtaaagacg ataaagttta
     8221 tttgcaatgt tttgatgctg atgagctgaa gcgtattaag aatgagctgg aacccaaaat
     8281 gggcatggag ctcaatctgg tacagctgat tgcctatacc gactggaatg aaacgcagca
     8341 gaaacagccg gatggaagct gggttaatta caactacgac tggatgttta agccgggtgc
     8401 catgaaacag gtggcggaat atgcagatgg tattggtccg gattaccata tgttgattga
     8461 ggagacatcg cagccgggta atatcaaact cactggcatg gtgcaagatg ctcagcagaa
     8521 taaactggta gtgcatcctt ataccgtgcg gtcagataaa ctgcctgaat acactcctga
     8581 tgtgaatcag ttatatgatg ctctgtataa caaagcgggt gtaaatgggc tgtttactga
     8641 tttccctgat aaggcagtaa aatttcttaa taaagagtaa tgttactgca ggatggcgtt
     8701 catgcgccat cctgtctcat atcaaatttt tccaatcgcc actaattgtt ccatgcacat
     8761 ttgtagtaaa aacagtggac tgccttctac cggcttttct ttagccagca acgaaatctg
     8821 tcgatagaaa gttggttcga gaggaacgga acacaattca cctgcaatgc ttttcagcgt
     8881 taactctggt tgtaaggcga tgcctaatcc ctgtcgaata aaattcatcg ctgtatccgc
     8941 ctgattaaat tcacatttta tctgctgggc gcactattag tggtagtggc tggtggaatc
     9001 tatgcgctgc aaatgaaggg taaaagcggt gtcaagctag tagtggcaaa agaaattcat
     9061 taatacgaca cgtttcatta agat
//
LOCUS       DADMHC010000161         8891 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.164, whole genome shotgun sequence.
ACCESSION   DADMHC010000161 DADMHC010000000
VERSION     DADMHC010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8891)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8891)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8891
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.164"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..562
                     /locus_tag="JNZ57_003156"
     CDS             <1..562
                     /locus_tag="JNZ57_003156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000735989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829269.1"
                     /translation="LGLWHVNASYILDIAGLDSIDTPARIFSPAHRKRELDVSANYYF
                     FLDYTKHAFHEISVEDLYITRPWVEYIGECMDKNQPIYSPETRINLQALYEDVKNVEH
                     GNRERHRQKREICLLALIYVKRHYPEECKGKNGKETNEAWANATINHWALLGGGYDEP
                     SIDYLKKLIADADRTPEERTTAGKKR"
     gene            675..878
                     /locus_tag="JNZ57_003157"
     CDS             675..878
                     /locus_tag="JNZ57_003157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001018038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family phage regulatory protein"
                     /protein_id="HAY8829270.1"
                     /translation="MNIDTIPTKGYIRRFRLAELLGVSVSTIDRKVRNGSLPRPVKLG
                     EKITAFDAVEIHNWLAERRGKVA"
     gene            878..1309
                     /locus_tag="JNZ57_003158"
     CDS             878..1309
                     /locus_tag="JNZ57_003158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829271.1"
                     /translation="MEKKNRPLQAANSDIRVSDVTPLTKSLQAPKRTPKKHRARVYML
                     RTGIEGWTENDILRYCRLSSGRNYASELERRLDIQLERIDEKNPDGIGPHLRYRFTGR
                     GDVLKVIRLVNHNADAGGYQGLSQPEIADILNLYPDNLTAA"
     gene            1323..2132
                     /locus_tag="JNZ57_003159"
                     /pseudo
     CDS             1323..2132
                     /locus_tag="JNZ57_003159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000151282.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="antA/AntB antirepressor family protein"
     gene            2125..2307
                     /locus_tag="JNZ57_003160"
     CDS             2125..2307
                     /locus_tag="JNZ57_003160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001244025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4222 domain-containing protein"
                     /protein_id="HAY8829272.1"
                     /translation="MRNHNPMPGSRYKDSHGAVVTVERVEHNRVTFYREGYQSPCVQP
                     LERFVNEFVEVRRDTE"
     gene            2294..3001
                     /locus_tag="JNZ57_003161"
     CDS             2294..3001
                     /locus_tag="JNZ57_003161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000602541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ash family protein"
                     /protein_id="HAY8829273.1"
                     /translation="MILNEPAAQKEAFNLAGLLTNVNPYNLIKPDIDTAAPGVPLPVR
                     EALTLNKKMVSRAQEKLLKGYGFIWYDHLAEKSCYSSSVAAKSATGRGNPNTLRATQT
                     PKASFFVSDHYAHQISGLVRTVSMVALVGLRSRRPVSFVSGISTPANVTAISERGNSG
                     GDSLNTKEAAAMLATTPTQKPQFIWIIAAVRRDCPTITAKIHHIAAESERDARRSLVR
                     DHVCFFAGRIRMEVAHD"
     gene            2994..3212
                     /locus_tag="JNZ57_003162"
     CDS             2994..3212
                     /locus_tag="JNZ57_003162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000598361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829274.1"
                     /translation="MIKTYDVHMDPLERTSQIITLTEVINDILVSNSPSRDEKLKALL
                     AILDLAVRDVHFLLEGGEMSGKRGATNE"
     gene            3205..3399
                     /locus_tag="JNZ57_003163"
     CDS             3205..3399
                     /locus_tag="JNZ57_003163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001065662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829275.1"
                     /translation="MNNSINTPRLTSALQLIEQTAAVLVAVSLSAEEMDAADVVDAIK
                     ACSSLVNDARAELVILGGEK"
     gene            3396..3659
                     /locus_tag="JNZ57_003164"
     CDS             3396..3659
                     /locus_tag="JNZ57_003164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001468267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinic acetylcholine receptor subunit beta"
                     /protein_id="HAY8829276.1"
                     /translation="MNINLIYRHPCELEIESLLGREEPYPDTFTPADCATERLTRART
                     GLVHVMNEIVPSVGGEQATVINSWLQKVTSLIDISLIDVESAK"
     gene            3656..3877
                     /locus_tag="JNZ57_003165"
     CDS             3656..3877
                     /locus_tag="JNZ57_003165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000181940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829277.1"
                     /translation="MTNIQLIEAQCRIEQVQTVLGFWLEGASPSNRDKLMIGAVMSLL
                     NGVPEAIQEADELLGKYELQNHSGEAKHE"
     gene            3870..4472
                     /locus_tag="JNZ57_003166"
     CDS             3870..4472
                     /locus_tag="JNZ57_003166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016245739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829278.1"
                     /translation="MNNFLTFHAEATPGGVNIMYRSNDGMTERVETVSYIDAVNRLDA
                     GDYDDKPDEGMFIHLAIASGGNQGYFDYTSQHHVIMWRWLIATVFMLEMREENGTVSI
                     IDDTGNPSEVAVYSNGIVAMPLYPVAERLAMANNIEGAMIERFGIESGTERAIIFYRA
                     MMDVEQGALTPFGRETLAELHNSFIAELNENGWPEMALAH"
     gene            4481..4822
                     /locus_tag="JNZ57_003167"
     CDS             4481..4822
                     /locus_tag="JNZ57_003167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000628964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829279.1"
                     /translation="MITKNFRLNALANKYAAALYNHITSTSGGDYFMIDADGLAVRVE
                     IVNGVKGVRSLIDSYALAAMKVRYPQWEIVGIELLDRCVTKDGLTDIGREIWQSMIND
                     MGATVAGGNHA"
     gene            4815..7574
                     /locus_tag="JNZ57_003168"
     CDS             4815..7574
                     /locus_tag="JNZ57_003168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF927 domain-containing protein"
                     /protein_id="HAY8829280.1"
                     /translation="MRNIDLIREVTSAAAGRWPYVLAELSIDVPDSSRRHSPCPACGG
                     KDRFRFDDNGRGSFICNQCGAGDGLDLIKRVNNCDTTEAAQLAADVLGIDYRTAQTDP
                     AAASHRREQLEADRQQREQERQKQAAEDAEQRRATFAHLYAGMRQSATQGESDYLQSK
                     GLTGFNYPVMPDGSLLLELVDESGAVAAAQTITPQGEKRLLTGSAKRGAYHAVNAPES
                     PQSVLIAEGLATALSVHLMRPDALAVAAIDAGNLLPVAEVMRRIYPATQIIIAADNDH
                     QQDDQANTGKDAAEKAALSVAGWVALPPTDYKADWDDYRQQNGLEVATAAFNDSMYQI
                     QGEAVKPRLQAIEGGKTDHPEKDPLKPHIESRKDSVFWVTPKVDKESGEIVNAESWLC
                     SPLEVIGTGRDDKDQYLIISWLAFGAGIPTTAAIPLADIGEREGWRTLKAGGVNVTTK
                     SSLRAILADWLQRSGSRELWRVAHATGWQCGAYIMPDGEIIGTPERPVLFSGRSSAAA
                     GYTVAGTPESWRNSVARLAYGNYAMMTGIAAALAAPLIGVAERDGFGIHFYEQSSAGK
                     TTTQNVASSLYGNPDALRLTWYGTALGMINEAAAHNDGLMPLDEVGQGADPISVSQSA
                     YALFNGVGKLQGAKEGGNRDLKRWRTVAISTGEMDLETFIASAGRKTKAGQLVRLLNI
                     PLSKAVRFHEHQTGKDHADALKSAWQSNHGAAGREWIRWLAGHQQQAIDTVRDCEARW
                     RSLIPADYGEQVHRVGARFAILEAALLLGGVVTGWDDQTCRDAIQHSYNAWLREFGTG
                     NKEHQQIIEQTEAFLNAYGLSRFAPLGYDPRDLPIRDLAGYRKKGNHDGDPIIFYTFP
                     AAFEQEIAKGFNTKQFAEVLKNAGMLTPPTSGRGYQGRVREDGRQIRVYVLNFMAEES
                     SQPEE"
     gene            7949..8383
                     /locus_tag="JNZ57_003169"
     CDS             7949..8383
                     /locus_tag="JNZ57_003169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000126714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HAY8829281.1"
                     /translation="MTAQISAYGRLVADPQTRTTTNGNNMAMARLAVSLPCNAAEAGE
                     STFWLGVIAFGKQADALAKHQKGDLVSVAGNMQLNQWTGQDGGTQQGYQVVADSVISA
                     RTVRPGGKAGQRGQATDALRRAQQPSRDEYDQSPPFDDETPF"
     gene            8394..>8891
                     /locus_tag="JNZ57_003170"
     CDS             8394..>8891
                     /locus_tag="JNZ57_003170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002436679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829282.1"
                     /translation="MSTQPIIIEFGSYRWPRHLAIHEAGHAIAAWFFGIQEVEIALSG
                     NNRVAKTYLSGDVDECGAVAVWHANYPRNVAEVKSYTLSNDDTRLRLIDQVCRAMVIS
                     LAGIVAQSRYTGDDINALMETSGKADMKNVRDLSEVYRVAGGEDADIQRISLSRAEAL
                     IALKWW"
BASE COUNT         2355 a         2177 c         2488 g         1871 t
ORIGIN      
        1 gcttgggcta tggcatgtta acgcctccta tatactcgac atcgcagggc ttgattctat
       61 tgacactccc gcacgcatat tcagccccgc acacagaaaa agagaactag acgtaagtgc
      121 gaattattat ttttttctcg attatacaaa acatgccttc cacgaaatat ccgtagagga
      181 tttgtacata acaaggccgt gggttgaata tatcggcgaa tgcatggaca aaaaccagcc
      241 catatacagc cccgaaactc gcataaactt acaagctctt tatgaggatg ttaaaaacgt
      301 tgagcacgga aacagagagc gccacaggca aaagcgcgaa atttgcctct tggcgttgat
      361 ttatgtgaag cggcactacc cagaagagtg taaagggaag aacgggaagg aaaccaacga
      421 agcatgggcg aacgccacaa taaaccactg ggcgcttttg gggggcggct atgatgagcc
      481 atccatagat tacctgaaga aactcatagc cgacgcagac agaacaccgg aagaacgcac
      541 cacggcaggg aaaaaaaggt gatagtaaat tttactatca cgatagtaaa aaatacgatc
      601 attccttttt gagcgtgcac gccattaaat ccccgtaacg aagcaacaac tatcgctaag
      661 aggttacggg aatcatgaac atcgacacta tccctacaaa aggctatatc agacgcttcc
      721 gcctggctga attgctgggc gttagtgtat ccaccatcga ccgtaaagta agaaacggtt
      781 cactaccacg tccggtaaag ctgggagaaa aaataactgc gtttgatgcg gttgagattc
      841 acaactggct ggcagaacgc cgcgggaagg tggcctgatg gaaaagaaaa accgcccatt
      901 acaggcggct aattcagata ttcgcgtatc tgatgttacg ccccttacaa aatcccttca
      961 agcaccaaag cgcacaccga aaaagcatcg tgccagagtc tatatgctgc gtactggtat
     1021 agagggatgg acagaaaatg acattctgcg ttattgccgc ctttcgtctg gaaggaacta
     1081 cgccagcgag ttagagcgca ggcttgatat tcagcttgag cgtatagacg aaaagaaccc
     1141 cgacgggata gggccacatt tacgctatcg ctttaccggg cgcggtgacg ttctaaaagt
     1201 tattcggctt gtgaaccata acgccgacgc tggcggctat cagggacttt ctcagcctga
     1261 aattgccgac attctcaatc tatacccgga caatctcacc gccgcataac ggagccgaaa
     1321 atatgactat cgaaaaaagc cgattcagtt cgggggccgc cccgcggccc aacgttaaca
     1381 cgggagtaat taacggcaac gactttgccg ctattgttcc cgttattgcc ggacgcattg
     1441 gcgggcgtga agccaatatt gtgagcgcta aggcgttgca taaagcgctg ggggtgggcc
     1501 gcgactttac taactggatt aaaggccgaa ttgaccagta cggttttatt gccggaaccg
     1561 attttatccg tgttgaaaat ttgagcacgc caaaacgggc gagcgcaaaa actcgccagc
     1621 aaatagagca tgattacctg ctatcgctgg atatggctaa agaagtggca atggttgaac
     1681 gcaacgagca gggccgcgct atccgccgtt atttcatcca gtgcgaggaa gaattacagc
     1741 gtagcgtgcc tgaaatcgcc gcccgctatc gtcgccagct aaaagcccgt ctcagtgccg
     1801 caaacaactt taagccaatg tgcgatgcgc tgaatatggc ccgtgccgag atgggcaaaa
     1861 cgacgcagca gcgccactac agcaacgaga gcaacatgat cgcccgtatc gtgctgggtg
     1921 gcatgacggc gaagcagtga gcgcaggcaa atggcattac tggcgaacca cgggacagca
     1981 tgaacgcagc acagcttgaa cacctcgcct atctcgaaag caccaatatc acgttaattg
     2041 atatgggcat ggaatatgag cagcgcaaag gagaactcac ccgcctgtcg caacgctggc
     2101 tcgctaaacg tctggaggta aaccatgcgt aaccacaatc cgatgccggg aagccgttac
     2161 aaggattcgc acggggctgt agtgaccgtt gagcgcgtcg agcataaccg agtgaccttt
     2221 taccgcgagg gctatcagtc gccatgtgtt cagcctttgg agagattcgt taatgagttc
     2281 gtggaggtgc gccgtgatac tgaatgaacc tgccgcccag aaagaagcct ttaatctggc
     2341 tggcctgtta acaaatgtta acccttacaa ccttataaaa cctgatattg ataccgcagc
     2401 gcccggagtt ccgttaccag tacgcgaggc gcttaccctc aacaaaaaga tggtgagccg
     2461 tgcacaggaa aaactcttaa agggttacgg ttttatctgg tatgaccacc tagcagagaa
     2521 aagctgttat agttcaagcg ttgctgcaaa atcagcaacc gggcgtggaa acccgaacac
     2581 actcagggcg acacagacgc cgaaagcgtc tttttttgtg tccgatcact acgcacatca
     2641 aatcagcggc ctagtccgta ctgtatcaat ggtggcgtta gtggggctac gttcgcgtag
     2701 gccggtttcc tttgtgtccg gtatttccac ccctgctaac gtcaccgcca tttcagagcg
     2761 tggaaactca ggcggtgact ccttaaacac aaaggaggct gccgctatgc tggctactac
     2821 ccctacccaa aaaccgcaat ttatctggat tatcgccgca gttcgccgcg attgcccgac
     2881 aattaccgcc aaaattcatc atattgctgc cgagtctgaa cgcgatgctc gccgttctct
     2941 ggtgcgcgat cacgtctgct tttttgctgg tcgtatccgc atggaggtgg cacatgatta
     3001 aaacctacga tgtgcatatg gatcccctcg aacgcacaag ccagatcatc acactgacag
     3061 aagtgattaa tgacattctg gtgagcaact ctccctcacg agacgaaaaa ctgaaggcgt
     3121 tactcgcgat attggatctc gccgttcgtg acgttcattt cctgctggaa ggtggcgaaa
     3181 tgtcaggaaa acggggggca accaatgaat aactcaatta atacccctcg ccttacgtcc
     3241 gcacttcaat taatcgagca aacagcggct gtcctggttg ctgtcagtct ttcggctgaa
     3301 gaaatggacg ctgctgatgt cgtggatgcg attaaagcgt gctcatcttt ggttaacgat
     3361 gcccgtgcag agctggtaat tcttgggggt gaaaaatgaa tatcaactta atttatcgtc
     3421 atccgtgtga gctggaaatt gaatcattgc tggggcgcga agagccatat ccagacacat
     3481 tcactcccgc agattgcgcg actgaacggc ttaccagagc gcgcacaggt ctggttcatg
     3541 tgatgaatga gattgttccc tcggtgggag gggaacaggc gacagtaatc aatagctggc
     3601 tacaaaaagt tacctccctg atagatatca gtttaatcga tgtggagagt gcgaaatgac
     3661 caacatccag ctcattgaag cgcaatgtcg catcgaacag gttcagactg ttttagggtt
     3721 ctggcttgaa ggggccagcc ccagcaacag agacaagtta atgattggcg cggttatgtc
     3781 actgctcaat ggcgtaccag aagctattca ggaagctgac gaattgttgg gcaaatatga
     3841 gttacagaat cattcaggcg aggcgaaaca tgaataattt cttaacgttc catgcagaag
     3901 caacgcctgg cggcgtaaac atcatgtacc gcagcaacga tggcatgaca gaacgcgttg
     3961 agaccgtctc atatattgat gccgtaaatc gtctggatgc cggggattat gacgataaac
     4021 cagatgaagg catgtttata catctcgcta ttgccagtgg cggcaaccag ggatatttcg
     4081 attacacatc acagcatcac gtgattatgt ggcgctggct gatcgcaaca gtattcatgc
     4141 tggaaatgag agaggaaaac ggcactgtca gcatcattga tgatactggc aatccttccg
     4201 aagtggctgt ttattccaac ggcatcgtcg ccatgccgct gtatccagta gcagagcgcc
     4261 tcgctatggc aaacaacatt gagggcgcga tgatagaacg ttttggcatc gagtctggca
     4321 cagaacgcgc catcattttc tacagagcca tgatggatgt ggaacaagga gcactgactc
     4381 catttggtcg tgaaacgctt gctgaacttc acaacagctt tatagctgaa ctgaatgaaa
     4441 acggctggcc tgaaatggcg ctggcgcact gaggggcgac atgattacta aaaatttccg
     4501 actgaatgcg ctggcgaata agtatgcggc agcactgtat aaccacatta cttccaccag
     4561 cggcggggac tatttcatga ttgatgcgga cggcctcgcc gtccgtgtgg aaatcgtcaa
     4621 tggagtaaaa ggcgttcgca gcctgattga tagctacgca ctggcagcca tgaaagtgcg
     4681 ctacccgcag tgggaaatcg tggggatcga gcttcttgat cgttgcgtca ctaaggacgg
     4741 attgactgac atcgggcgcg agatatggca aagcatgatt aatgatatgg gcgcgaccgt
     4801 ggcaggaggc aaccatgcgt aatatcgacc ttatccgcga agtgaccagc gccgcagcag
     4861 ggcgctggcc ttatgtgctg gctgaattgt ctatcgacgt gcctgattca tcgcgccgcc
     4921 attctccatg ccctgcatgt ggtggaaaag accgtttcag attcgacgac aacgggcgcg
     4981 gtagctttat ctgcaaccag tgtggcgctg gtgacgggct ggatttaatc aagcgggtaa
     5041 acaactgcga caccacggag gcggcacagc ttgccgctga cgtgctgggt attgattacc
     5101 ggacagcgca aaccgacccg gcggcagcga gccatagaag agagcaactg gaagctgacc
     5161 gccagcagcg tgagcaggag cgccagaaac aggcagcaga ggacgcagag cagcgaaggg
     5221 ctacgtttgc ccatctgtat gccggaatgc gccagagtgc cacacagggc gaatctgatt
     5281 acctgcaatc aaaagggctg accgggttta actatccggt tatgccggat ggttcgttat
     5341 tgctggagct ggtggacgaa tccggcgcag tggcagcagc gcaaaccatt acaccgcagg
     5401 gagagaagcg actcctgaca ggttcagcaa agcgcggggc atatcacgcc gtaaacgcgc
     5461 cagaatcgcc gcagagcgtt ttaattgccg aggggctggc gacggccctt tcagttcacc
     5521 tgatgcgccc ggacgcgctg gcagtggcag caattgacgc gggcaacctg ctacccgttg
     5581 ccgaagtgat gcgccggata tatcccgcca cgcagattat cattgccgca gataacgacc
     5641 accagcagga cgaccaggcg aacacgggca aagatgccgc agagaaagcc gccttatccg
     5701 tggctggctg ggtggcgctg ccgccgacag actacaaagc cgactgggac gactaccgcc
     5761 agcaaaacgg gctggaagtc gctacggctg cgtttaacga ttcgatgtac cagattcaag
     5821 gggaagccgt gaaaccgcga ttgcaagcca ttgagggcgg taaaactgac catccagaga
     5881 aagatccact aaaaccccac attgagagcc gcaaagatag cgttttctgg gtaacgccga
     5941 aggtggacaa ggaaagcggg gagatcgtca acgctgaaag ctggttatgt tccccgttgg
     6001 aggttatcgg cacgggacgc gacgacaaag atcagtatct tattatctca tggctggcat
     6061 tcggtgcagg cataccgaca acagcggcta tcccgctggc tgatattggc gagcgtgaag
     6121 gctggcgcac cctgaaagct ggtggggtta acgtcacgac caaaagcagt ttacgggcga
     6181 tccttgccga ctggctacag cggagcggct cgcgtgaatt gtggcgcgtt gctcatgcta
     6241 caggctggca gtgcggggca tacatcatgc cggacgggga aatcatcggc acacctgagc
     6301 ggcctgtttt gttcagcggg cgcagttcag ccgctgccgg gtataccgta gcaggaacgc
     6361 cggaaagctg gcgcaacagt gtcgcgcggc tggcatacgg caactacgcg atgatgacag
     6421 gcattgccgc agcactggca gcgccattaa tcggggtggc agagcgtgac ggattcggga
     6481 ttcattttta tgagcaatcg agcgccggga aaacaaccac gcagaacgtg gctagcagtc
     6541 tatacgggaa ccctgatgcc ttgcgcctga cgtggtacgg gacggcgctg gggatgataa
     6601 acgaggccgc cgcccacaat gacggactga tgccgctgga tgaagtcgga cagggcgcag
     6661 acccgataag cgtttctcag tctgcctatg ccctgtttaa cggcgtaggg aaattgcagg
     6721 gcgcgaaaga aggcggaaat cgggatctaa aacgctggcg taccgtggca atcagcaccg
     6781 gggaaatgga tttagaaacg ttcattgcct ccgcaggacg caagacaaaa gcggggcaac
     6841 tggtgcgcct gctgaatatc ccgttaagta aggcggtgcg ctttcatgag caccagacag
     6901 ggaaagacca tgcagacgca ttaaaatccg cgtggcagag caatcacggc gctgccgggc
     6961 gggagtggat cagatggctt gcaggccacc agcagcaggc cattgatacc gttcgtgact
     7021 gtgaagcccg ctggcgcagt cttattcctg ccgactatgg ggaacaggtt caccgtgtag
     7081 gggcaaggtt cgccattctg gaggctgctt tactgctggg tggcgtggtt actggctggg
     7141 atgatcaaac gtgccgtgat gcgatacagc acagctacaa tgcgtggttg cgtgagttcg
     7201 gcacggggaa caaagagcac cagcagatta ttgagcagac ggaggcgttt ttgaatgcct
     7261 atgggctgag tcgattcgcg ccgctgggtt atgacccgcg cgatttaccc atccgtgatt
     7321 tagccgggta caggaagaag gggaaccacg acggcgaccc gataattttc tacaccttcc
     7381 cggcagcgtt tgagcaggag attgcaaagg gcttcaatac caaacagttt gccgaagttc
     7441 taaagaatgc aggaatgctt acaccaccaa cgagcgggcg aggctatcag gggcgagtaa
     7501 gggaggatgg gcgacagatt cgcgtctatg tactcaattt catggcagag gaaagcagcc
     7561 agccagaaga ataattattt cttcacatgc gtagttttag tgttgtctcg gttgtctttg
     7621 ttgtctcaat ttgtaattga gattgattta taaggatttt attttaattt ctgagacaac
     7681 accgagacaa catttagcca ttttgagaca acagggcgaa agtgtgtttt tagtctggca
     7741 ggcagtgaga caacatttat gccgggtgag acaacacgaa attgcaaatg ttgtctcagc
     7801 aaaacccaga cgtggcgcgg cctgtagagc cgtgagacaa caaagacaac agagacaaca
     7861 ctatttttgc ttactatgaa aaaaaatcgg caggtgtccc acattaagaa atcgtcatta
     7921 gcaaaactaa taatccagtg aggggaaaat gacagcacaa atttcagcat acgggcggct
     7981 ggtggcagat ccccagaccc gcaccacaac gaacggtaac aacatggcta tggcgcggct
     8041 ggcggtgtct ctcccctgta atgcggcaga ggcgggagag tcaaccttct ggctgggcgt
     8101 tattgctttt gggaagcagg ccgatgcgct ggcaaagcac cagaaaggcg accttgtgag
     8161 cgtggcaggc aatatgcaac tcaaccagtg gacagggcag gacggcggta cacagcaggg
     8221 gtatcaggta gtagccgaca gtgtgatcag cgccagaacg gtacgccccg gcgggaaggc
     8281 aggacagcgg ggacaggcaa cggacgcgct gagacgtgcg cagcagccat cccgtgatga
     8341 atacgaccaa agcccaccat tcgacgatga aacgccattc tgagagggaa gatatgagta
     8401 cgcaacccat cattattgag ttcggcagct atcgctggcc cagacatctt gcaatacatg
     8461 aagcaggtca tgcgatagcc gcatggtttt tcggcataca ggaggtagaa attgcgttat
     8521 cgggtaataa ccgagtggca aaaacctacc ttagcggcga tgttgatgaa tgtggagctg
     8581 tcgcggtatg gcacgccaac tatccacgga atgtggctga ggttaagtct tacaccctct
     8641 cgaatgatga caccaggtta cgtctgatag accaggtatg ccgggctatg gttatctctc
     8701 tggctggtat cgtcgcgcaa tcacgctata cgggggatga tattaacgca ctgatggaaa
     8761 cgtccgggaa agcagacatg aaaaatgttc gtgatttatc agaggtatac cgggtggctg
     8821 gtggggagga tgctgatata cagagaatat ccctttcccg tgctgaggcg ctgattgccc
     8881 tgaaatggtg g
//
LOCUS       DADMHC010000162         8890 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.165, whole genome shotgun sequence.
ACCESSION   DADMHC010000162 DADMHC010000000
VERSION     DADMHC010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8890)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8890)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8890
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.165"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(481..1545)
                     /gene="phoH"
                     /locus_tag="JNZ57_003171"
     CDS             complement(481..1545)
                     /gene="phoH"
                     /locus_tag="JNZ57_003171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate starvation-inducible protein PhoH"
                     /protein_id="HAY8829283.1"
                     /translation="MVTSCTGHVLDNQRATTRGVFSSGSHLVTLHFQPHPFFSCVTDA
                     VNGARSRFSAFYPKANYGLQGSQPSDVRAHNRAANGACDEYKQLKVLSMGRQKAVIKA
                     RREAKRVLRRDSRSHKQREEESVTSLVQMSGVEAIGMARDSRDTSPILARNEAQLHYL
                     KAIESKQLIFATGEAGCGKTWISAAKAAEALIHKDVDRIIVTRPVLQADEDLGFLPGD
                     IAEKFAPYFRPVYDVLVRRLGASFMQYCLRPEIGKVEIAPFAYMRGRTFENAVVILDE
                     AQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLPRGVCSGLSDALERFEEDEMVGIVR
                     FGKEDCVRSALCQRTLHAYS"
     gene            complement(1895..3403)
                     /gene="putP"
                     /locus_tag="JNZ57_003172"
     CDS             complement(1895..3403)
                     /gene="putP"
                     /locus_tag="JNZ57_003172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HAY8829284.1"
                     /translation="MAISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGP
                     FVTALSAGASDMSGWLLMGLPGAVFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTE
                     YNNNALTLPDYFTGRFEDKSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSY
                     ETALWAGAAATILYTFIGGFLAVSWTDTVQASLMIFALILTPVIVIICVGGFGDSLEV
                     IKQKSIENVDMLKGLNFVAIISLMGWGLGYFGQPHILARFMAADSHHSIVHARRISMT
                     WMILCLAGAVAVGFFGIAYFNEHPAVAGAVNQNAERVFIELAQILFNPWIAGILLSAI
                     LAAVMSTLSCQLLVCSSAITEDLYKVFLRKHASQKELVWVGRVMVLVVALVAIALAAN
                     PENRVLGLVSYAWAGFGAAFGPVVLFSVMWSRMTRNGALAGMIIGALAVIVWKQFGWL
                     GLYEIIPGFIFGSIGIVVFSLLGKAPSAAMQKRFAEADAHYHSAPPSRLQES"
     gene            complement(3562..3771)
                     /locus_tag="JNZ57_003173"
     CDS             complement(3562..3771)
                     /locus_tag="JNZ57_003173"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829285.1"
                     /translation="MMLQLCATMLNVTCVASLKMNEMLIKEIDMTGIKKITQTFSLRQ
                     LTFLKGATAKNVRECNLMKNSVAEH"
     gene            3826..7788
                     /gene="putA"
                     /locus_tag="JNZ57_003174"
     CDS             3826..7788
                     /gene="putA"
                     /locus_tag="JNZ57_003174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001462364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trifunctional transcriptional regulator/proline
                     dehydrogenase/L-glutamate gamma-semialdehyde
                     dehydrogenase"
                     /protein_id="HAY8829286.1"
                     /translation="MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQL
                     ENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRP
                     ETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQ
                     EGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGK
                     LVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALVNARKLE
                     EKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALH
                     PRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLENLCFEPE
                     LAGWNGIGFVIQAYQKRCPLVIDYLVDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGL
                     EGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQY
                     EFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSF
                     VNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDL
                     ANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGFVREATPR
                     EVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAI
                     AEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNS
                     VLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGAQLTGDDRVRGVMFTGS
                     TEVATLLQCNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVVDVLASAFDSAG
                     QRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHI
                     QTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELHKEVFGPVLHVVRYN
                     RNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPF
                     GGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNAL
                     REWAANRPELQALCTQYGELAQAGIQRLLPGPTGERNTWTLLPRERVLCIADDEQDAL
                     TQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDS
                     DQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
                     "
     gene            complement(7828..8466)
                     /gene="rutR"
                     /locus_tag="JNZ57_003175"
     CDS             complement(7828..8466)
                     /gene="rutR"
                     /locus_tag="JNZ57_003175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator RutR"
                     /protein_id="HAY8829287.1"
                     /translation="MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQI
                     AELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKL
                     EVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQ
                     HLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR"
     gene            8754..>8890
                     /locus_tag="JNZ57_003176"
     CDS             8754..>8890
                     /locus_tag="JNZ57_003176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine utilization protein A"
                     /protein_id="HAY8829288.1"
                     /translation="MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDF
                     AL"
BASE COUNT         2169 a         2434 c         2281 g         2006 t
ORIGIN      
        1 atcatgtttt gattattaca accatcccta tttagccatt gcggcttgcc ttccacaaaa
       61 aaataacaac acacaatatt agcaaagaat taattaagat taaccttaca tttataatat
      121 tatccctaaa gaataaatca gaggaatata ttcggtgtta aacagtcagt caaagtatag
      181 cccattgttg attaaacctc ataagcaaaa ttggcaccag atctcctgta caggttgaat
      241 ggccgaaaaa agataggcag atgctcattt ttttggcttc tggaagaaaa actctccgcg
      301 ctggcagtat tacactggtc tgatgctatg acgaaaaatg cctggtaaga gtatctaaac
      361 cagactccag ttcagcttat caacacgctc aaagtcgccc ccctgaacgc taacctgaag
      421 tgaaaatctg ttgaaataaa acaaagcccg gttcgcccgg gctctgcacc gataacacac
      481 ttaactgtat gcatgcagcg tacgttggca aagtgccgaa cgtacgcaat cctcttttcc
      541 gaaccggacg atcccaacca tttcatcttc ttcgaaacgt tccagcgcgt cacttaatcc
      601 ggagcacacg ccgcgaggca aatcgcattg cgtgatatca ccgttgacga taaccgtcac
      661 gttctccccg aggcgggtta aaaacatttt catttgcgcg gcagtcacat tctgcgcctc
      721 gtcaagaatg acgactgcat tttcaaaggt acgtccacgc atataggcga acggcgcgat
      781 ttccaccttc cctatttccg gtcgcaggca gtactgcata aaggaagccc ctaagcgccg
      841 gaccagcacg tcgtagaccg ggcgaaaata gggagcaaac ttttctgcga tatcaccagg
      901 taagaagcca agatcttcat cggcttgcag aactggacgg gtgacgataa tcctgtcgac
      961 atccttatgt atcagggcct ctgccgcttt tgctgcgctg atccaggttt ttccgcaccc
     1021 ggcttcgccc gtggcgaata tcagctgctt actctcaata gccttcagat agtgcaattg
     1081 cgcttcattt cgcgcgagga tgggcgaggt atcgcgactg tcgcgggcca taccaatggc
     1141 ttctacgccg ctcatctgca caagcgaggt gaccgattct tcttcacgct gcttatggct
     1201 gcgcgaatcc cgtctcagca cacgttttgc ctcgcgacga gctttgatca ctgctttttg
     1261 tcttcccatg gagagcacct tgagttgttt gtattcatca cacgcgccgt tggcagcgcg
     1321 attatgcgca cgaacatcag agggttggct tccttgtaag ccatagtttg cttttggata
     1381 aaatgccgaa aaacggctac gcgcaccgtt tacggcgtcg gtaacacatg aaaagaaagg
     1441 atgaggttga aaatgcaaag tgacgagatg actaccggag gagaaaactc cgcgagtggt
     1501 ggcgcgttga ttatctaaaa catgtccagt acaggacgtt accatccgcg attatcaaat
     1561 ctaacttttt gcccggaaca taataacagc tcgggtgttg gtggcgtcaa aatcgctgaa
     1621 gcgttccccg aaggccggga cagcccacat ggatgtgggc tgagggcgcg tcttacagga
     1681 cgttacctcg cgcccgaccc ggtagccgaa ggggataagc tgaaggtacc gcgcagcggc
     1741 gattttgttc gccagagccc gggggtgcac agggggcggc ggcgattggc cgccccctgc
     1801 gcgctccctg caccattcaa tttatatggc gaggcacatt aagggagcgc aacccgctgc
     1861 tgaagccaaa caaaaccgcc gcaggctaag tcccttagct ttcctgcaac cgtgacggcg
     1921 gagccgaatg atagtgcgca tcggcctcgg caaagcgttt ttgcatcgcc gctgacggcg
     1981 ctttacccag caaactaaac actacaatcc cgatactgcc gaagatgaag cccggaataa
     2041 tttcgtacag tcccagccag ccgaactgct tccagacgat aaccgccagc gcaccgatga
     2101 tcatccccgc cagtgcaccg ttacgcgtca tgcgtgacca catcaccgag aacagcacca
     2161 ccggaccaaa cgccgcgcca aagcctgccc acgcgtagct cactaagccc agcacgcggt
     2221 tttccgggtt tgccgccagc gcaatcgcca ccagcgccac caccagcacc atcacacgcc
     2281 ctacccacac cagctctttc tggctggcat gtttacgcag aaacactttg tataaatctt
     2341 cggtaatcgc actggagcac accagcagtt ggcaacttaa ggttgacatt accgccgcca
     2401 gaattgccga cagcagaatc ccggcaatcc acgggttaaa cagaatttgc gccagttcga
     2461 taaacacgcg ctcggcgttc tggtttaccg cgcctgctac cgccgggtgc tcattaaagt
     2521 aagcaatccc aaagaagccg acagccaccg cccctgccag gcagaggatc atccaggtca
     2581 tactgatacg acgcgcatgg acaatgctgt ggtgagaatc cgccgccata aaacgcgcca
     2641 gaatgtgcgg ctgcccgaag taacccagcc cccaacccat cagtgagata atggcaacaa
     2701 agttcagacc tttgagcata tcaacgtttt cgatgctctt ttgtttgatc acttccagcg
     2761 agtcaccaaa gccaccgaca cagataatga cgataaccgg tgtcaggatc agggcaaaaa
     2821 tcatcaggct ggcctgtaca gtgtcagtcc agctcaccgc gaggaaaccg ccaataaagg
     2881 tgtaaaggat cgtcgccgca gctcccgccc acagagccgt ttcgtagctc atgccaaagg
     2941 tactttcaaa cagacgcgcg cctgccacaa tgcccgaagc gcaataaatg gtgaagaaca
     3001 gcaaaataac cagcgcggag ataatgcgca aaatgcggct tttatcttca aaacgcccgg
     3061 tgaaataatc cggcaatgtt aaggcgttat tattgtattc ggtatgcaca cgcaaccgcc
     3121 cggccaccag cttccagttg atccacgcgc ctaatgtcag gccaatggcg atccagcttt
     3181 cggaaatccc ggaaagaaaa accgcgccag gcaaccccat taacagccag ccgctcatat
     3241 ccgacgcacc cgccgataat gccgtcacaa atggcccaag actacgaccg cccagaatat
     3301 agtcgtcaaa gtttttcgtt gatcgccagg cgataaaccc aatcaatatc atgccaaaga
     3361 tatagacaca aaatgtcacc aacatcggtg tgctaatagc catctaaagt ctccaaaaaa
     3421 ttattatcgg caatgtcgaa acttgccgtt atatctgcaa ccggaacggg gtaacagagt
     3481 ttatttttta ccagggcgac cgtatcctgc cggaagcgct ggttattcac aatcgattta
     3541 acacaccatt tacattaaat tttagtgctc agcgacacta tttttcatca ggttgcactc
     3601 tctcacattt tttgcggttg cacctttcaa aaatgttaac tgccgcagag aaaaagtctg
     3661 agttattttt ttaatccctg tcatatcaat ttcttttatt aacatttcat tcatttttaa
     3721 gcttgctacg caggtcacat ttaacatggt tgcacaaagt tgcaacatca tggatatttc
     3781 acgataacgt taagttgcac ctttcagaac aacaggagta atggcatggg aaccaccacc
     3841 atgggggtta agctggacga cgcgacgcgt gagcgtatta agtctgccgc gacacgtatc
     3901 gatcgcacgc cacactggtt aattaagcag gcgatttttt cttatctcga acaactggaa
     3961 aacagcgata ctctgccaga gctacctgcg ctgctttctg gtgctgccaa tgagagcgat
     4021 gaagcaccga ctccggcaga ggaaccacac cagccattcc tcgactttgc cgagcaaatt
     4081 ttgccccagt cggtttcccg cgccgcgatc accgcggcct atcgtcgccc ggaaaccgaa
     4141 gcggtttcta tgctgctgga acaagcccgc ctgccgcagc cagttgctga acaggcgcat
     4201 aaactggcat atcaactggc cgataaactg cgtaatcaaa aaaatgccag tggtcgcgca
     4261 ggtatggtcc aggggttatt gcaggagttt tcgctgtcat cgcaggaagg cgtggcgctg
     4321 atgtgtctgg cggaagcgtt gttgcgtatt cccgacaaag ccacccgcga cgcgttaatt
     4381 cgcgacaaaa tcagcaacgg taactggcag tcacacattg gtcgtagccc gtcactgttt
     4441 gttaatgccg ctacctgggg gctgttgttt actggcaaac tggtttccac ccataacgaa
     4501 gccagcctct cccgctcgct gaaccgcatt atcggtaaaa gcggtgaacc gctgatccgc
     4561 aaaggtgtgg atatggcgat gcgcctgatg ggcgagcagt tcgtcacggg tgaaaccatc
     4621 gcggaagcgt tagtcaatgc ccgcaagctg gaagagaaag gtttccgtta ctcttacgat
     4681 atgctgggcg aagctgcact gactgccgca gacgcacagg cgtatatggt ttcctatcag
     4741 caggcgattc acgccattgg taaagcgtct aacggtcgtg gcatctatga aggtccgggc
     4801 atttcaatca agctgtcggc gctgcatccg cgctacagcc gcgcccagta tgaccgggta
     4861 atggaagagc tttacccgcg tctgaaatca ctcaccctgc tggcgcgtca gtatgatatt
     4921 ggtattaaca tcgatgccga agaggccgat cgtctggaga tctccctcga tctgctggaa
     4981 aatctctgtt tcgagccgga actggcaggc tggaacggca tcggttttgt tattcaggct
     5041 tatcaaaaac gctgcccgtt ggtgatcgat tacctggttg atctcgccac ccgtagccgt
     5101 cgccgtctga tgattcgcct ggtgaaaggc gcgtactggg atagtgaaat caagcgtgcg
     5161 cagatggacg gccttgaagg ctatccggtt tatacccgca aggtgtatac cgacgtttct
     5221 tatctcgcct gtgcgaaaaa gctgctggcg gtgccgaatc taatctaccc gcagttcgcg
     5281 acgcacaacg cccatacgct ggcagcgatt tatcaactgg caggtcagaa ctactatccg
     5341 ggtcagtacg agttccagtg cctgcatggt atgggcgagc cactgtacga gcaggtcaca
     5401 gggaaagttg ccgacggtaa acttaaccga ccgtgtcgta tttatgcccc ggttggcaca
     5461 catgaaacgc tgctggcgta tctggtgcgt cgcctgctgg aaaacggtgc taacacctcg
     5521 tttgttaacc gtattgccga cacctctttg ccactggatg aactggtcgc cgatccggtc
     5581 actgctgtag aaaaactggc gcaacaggaa gggcaaactg gattaccgca tccgaaaatt
     5641 cccctgccgc gcgatcttta cggtcacggg cgcgacaact cggcagggct ggatctcgct
     5701 aacgaacacc gtctggcctc gctctcctct gccctgctca atagtgcact gcaaaaatgg
     5761 caggccttgc caatgctgga acaaccggta gcggcaggtg agatgtcgcc cgttattaac
     5821 cctgcggaac cgaaagatat tgtgggcttt gtgcgtgaag ccacgccgcg tgaagtagaa
     5881 caggcgctgg aaagtgcggt taataacgcg ccaatctggt ttgccacgcc tccggctgaa
     5941 cgcgcggcga ttttgcatcg cgctgccgtg ctaatggaaa gccagatgca gcaactgatt
     6001 ggtattctgg tgcgtgaagc cggaaaaacc ttcagtaacg ctattgccga agtgcgcgaa
     6061 gcggtcgatt ttctccacta ctacgccgga caggtgcggg atgatttcgc taacgaaacc
     6121 caccgtccat tagggcctgt ggtgtgtatc agtccgtgga acttcccgct ggctattttc
     6181 accgggcaga tcgctgccgc actggcggca ggtaacagcg tgctggcaaa accggcagaa
     6241 caaacgccgc tgattgccgc gcaagggatc gccattttgc tggaagcggg tgtaccccct
     6301 ggcgtggtgc aattgctgcc aggtcagggg gaaaccgtgg gcgcgcaact gacgggtgat
     6361 gatcgcgtgc gcggggtgat gtttaccggt tcaaccgaag tcgctacgtt actgcagtgc
     6421 aatatcgcca gccgcctgga cgctcagggt cgccctattc cgctcatcgc tgaaaccggc
     6481 ggcatgaacg cgatgattgt cgattcttca gcactgaccg aacaagtcgt cgtggatgtg
     6541 ctggcctcgg cgttcgacag tgcgggtcag cgttgttcgg cactgcgcgt gctgtgcctg
     6601 caagatgaga ttgccgacca cacgttgaaa atgctgcgcg gtgcaatggc cgaatgccgg
     6661 atgggtaatc cgggtcgcct gaccaccgat atcggtccgg tgattgatag cgaagcgaaa
     6721 gccaatattg agcgccatat tcagaccatg cgtagcaaag gccgtccggt gttccaggcg
     6781 gtgcgggaaa acagcgaaga tgcccgtgaa tggcaaagcg gcacctttgt cgccccgacg
     6841 ctgatcgaac tggatgactt tgccgaattg cacaaagagg tctttggtcc ggtgctgcat
     6901 gtggtgcgtt acaaccgtaa ccagctacca gagctgatcg agcagattaa cgcttccggc
     6961 tatggtctga cgcttggtgt ccatacgcgt attgatgaaa ccatcgccca ggtcactggc
     7021 tcggcccatg ttggtaacct gtatgttaac cgtaatatgg tgggcgcagt ggttggtgtg
     7081 cagccgttcg gcggcgaagg gttgtccggt accgggccga aagcaggcgg tccgctctat
     7141 ctctaccgtc tgctggcgaa tcgcccggaa agtgcgctgg cagtgacgct cgcgcgtcag
     7201 gatgcagagt atccggtcga tgcacagttg aaagccgcat tgactcagcc gctaaatgca
     7261 ctgcgggaat gggcagcaaa tcgtccagaa ttgcaggcgt tatgtacgca atatggcgag
     7321 ctggcgcagg caggaataca acgattgctg ccggggccga cgggtgaacg caacacctgg
     7381 acgctgctgc cgcgtgagcg cgtgttgtgt attgccgatg atgagcagga tgcgctgact
     7441 cagctcgccg ccgtgctggc ggtgggcagc caggtactgt ggccggatga cgcgctgcat
     7501 cgtcagctag taaaggcatt gccatcggca gtcagcgaac gtattcaact ggcgaaagcg
     7561 gaaaatataa ccgctcaacc ctttgatgcg gtgatcttcc acggtgattc ggatcagctt
     7621 cgcgcattgt gtgaagccgt tgctgcgcgg gatggcgcaa ttgtttcggt gcagggtttt
     7681 gcccgtggcg aaagcaatat ccttctggaa cggctgtata tcgaacgttc gctgagtgtg
     7741 aataccgctg ccgctggcgg taacgccagt ttaatgacga tcggttaaac aggtagccgg
     7801 aggatgttac accctcctcc ggcatcttta acgtggtcga atcccctcaa taataatccg
     7861 ctgcacgttt tcaaccgttt gattgaaaaa tacctcatcg cgcaacgttg cgcctgtcac
     7921 cgcctccacc tgaggggcga aatcggcgta atgttgagtg gaagcccaaa tcataaaaat
     7981 caaatgctgc ggatcaatcg gcgcgagttt gccgcttttg acccaaccgg caatcagcgc
     8041 cgatttctca tcaattaatg ccttcaaatc gcccgtcagt tcatccatta acagcggcgc
     8101 gcctgccagc atctccatac agaacaggcg cgaagcctgc ggataatcgc gtgagacttc
     8161 cagcttcaga cggatgtact ctttgatcgc cgccagcggg gcgaaatctt cacgaaacgc
     8221 ttttaacggt gccagccaga tatcgagaat ctgccgcagc acggcaatat acagcgcctc
     8281 ttttgacgga aagtaataca gcagattggt ttttgaaaca cccgccaact ctgcgatctg
     8341 ctccagcctt gtgccgtgaa aaccgaattg tgaaaaagtg tccagtgctg cgctaagaat
     8401 cgcttttttc ttcgcgctta ctgcgcgcga acgtttaccc gttgttttca ctgcgccttg
     8461 cgtcatgcgc tctcccctct tgtagattgg caacaggata gcaaaacccc cgcccggcct
     8521 cgaccttctg cactctcatc gcgcacggat gcatgtttta tgtgcaactg ttttgaccgt
     8581 ttagtccact ttttaccaga tattttagat aacacaatgc taacacatta ataatattca
     8641 ctttttaaaa actggcatcc gctttgcaaa caatccaata cgcggctgaa aaggatatgc
     8701 aggatgcagc gccccgtctg actttcactt tacgagacga agagaggttg atgatgaaaa
     8761 ttggcgtatt cgtacctatt ggcaacaacg gctggctcat ttcgacccac gcgccgcagt
     8821 acatgccgac ctttgaactg aataaagcca ttgtgcaaaa agcggagcat taccatttcg
     8881 atttcgccct
//
LOCUS       DADMHC010000163         8820 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.166, whole genome shotgun sequence.
ACCESSION   DADMHC010000163 DADMHC010000000
VERSION     DADMHC010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8820
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.166"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            228..476
                     /locus_tag="JNZ57_003177"
     CDS             228..476
                     /locus_tag="JNZ57_003177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1158 domain-containing protein"
                     /protein_id="HAY8829289.1"
                     /translation="MKHPLETLTTAAGILLMAFLSCLLLPAPALGLTLAQKLVTMFHL
                     MDLSQLYTLLFCLWFLVLGAIEYFVLRFIWRRWFSLAD"
     gene            541..909
                     /locus_tag="JNZ57_003178"
     CDS             541..909
                     /locus_tag="JNZ57_003178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HAY8829290.1"
                     /translation="MDKQSLHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSS
                     ELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISVYPGEEISEALLRDLIND
                     SWNLVVDGLAKRDQKRVRLG"
     gene            1003..1656
                     /gene="nfsB"
                     /locus_tag="JNZ57_003179"
     CDS             1003..1656
                     /gene="nfsB"
                     /locus_tag="JNZ57_003179"
                     /EC_number="1.5.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-insensitive NAD(P)H nitroreductase"
                     /protein_id="HAY8829291.1"
                     /translation="MDIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQ
                     PWHFIVASTEEGKARVAKSAAGNYMFNERKILDASHVVVFCAKTAMVDAWLKLVVDQE
                     DADGRFATPEAKAANDKGRKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLD
                     AVPIEGFDAAILDAEFGLKEKGYTSLVVVPVGHHSVEDFNATLPKSRLPQNITLTEV"
     gene            1764..3011
                     /locus_tag="JNZ57_003180"
     CDS             1764..3011
                     /locus_tag="JNZ57_003180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HAY8829292.1"
                     /translation="MQDLISQVGDLAGIEIDHTTSMVMIFGIIFLTAVVVHIILHWVV
                     LRTFEKRAIASSRLWLQIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTC
                     AQLWIMMYALLSVFSLLDVILNLAQKFPAASQLPLKGIFQGIKLIGAILVGILMISLL
                     IGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGA
                     VIDIGLTTVKVRNWDNTITTIPTWSLVSDSFKNWSGMSASGGRRIKRSISIDVTSIRF
                     LDEDEMQRLNKAHLLKPYLTSRHQEINEWNRQQGSTESILNLRRMTNIGTFRAYLNEY
                     LRNHPRIRKDMTLMVRQLAPGDNGLPLEIYAFTNTVVWLEYESIQADIFDHIFAIVEE
                     FGLRLHQSPAGNDIRSLAGAFKQ"
     gene            complement(3079..4455)
                     /gene="pheP"
                     /locus_tag="JNZ57_003181"
     CDS             complement(3079..4455)
                     /gene="pheP"
                     /locus_tag="JNZ57_003181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine transporter"
                     /protein_id="HAY8829293.1"
                     /translation="MKNASTVSEDTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLG
                     IGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFL
                     SGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGET
                     EFWFALIKVLAIIGMIGFGLWLLFSGHGGEKASIDNLWCYGGFFATGWNGLILSLAVI
                     MFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSN
                     SSPFVMIFHNLDSNEVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTR
                     VSHRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRF
                     RAAMRRQGRETQFKALLYPFGNYLCIAFLGMILLLMCTMDDMRLSAILLPVWIVFLFV
                     AFKTLRRK"
     gene            complement(4557..7700)
                     /gene="cusA"
                     /locus_tag="JNZ57_003182"
                     /pseudo
     CDS             complement(4557..7700)
                     /gene="cusA"
                     /locus_tag="JNZ57_003182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415107.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(+)/Ag(+) efflux RND transporter permease
                     subunit CusA"
     gene            complement(7712..>8820)
                     /gene="cusB"
                     /locus_tag="JNZ57_003183"
     CDS             complement(7712..>8820)
                     /gene="cusB"
                     /locus_tag="JNZ57_003183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Cu(+)/Ag(+) efflux RND transporter periplasmic
                     adaptor subunit CusB"
                     /protein_id="HAY8829294.1"
                     /translation="RKILFWYDPMYPNTRFDKPGKSPFMDMDLVPKYADEESSASGVR
                     IDPTQTQNLGVKTATVTRGPLTFAQSFPANVSYNEYQYAIVQARAAGFIDKVYPLTVG
                     DKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMPEADIRRLI
                     ATQKIQTRFTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQGMDPVWVTAAIPESIAWL
                     VKDASQFTLTVPARPDKTLTIRKWTLLPGVDAATCTLQLRLEVDNADEALKPGMNAWL
                     QLNTASEPMLLIPSQGLIDTGSEQRVITIDADGRFVPKRVAVFQASQGVTALRSGLAE
                     GEKVVSSGLFLIDSEANISGALERMRSESATHAH"
BASE COUNT         2118 a         2468 c         2177 g         2057 t
ORIGIN      
        1 ccttccgcac ataaaattgg tgcatcgagc gcgattgagg ccctgcatcg ccaggtcgtc
       61 agcggtctga atgaagcgca gctgatgcgc gatttcgtcg ccgatggtgg ctcgctgatt
      121 gggctggtga aaaagcattg tgagatctgg gccggtgact aagtagggaa ttgccttaca
      181 gaagaatatc cctgacaatg gtgttttaac ttacatttaa caatgttatg aaacaccctt
      241 tagaaacctt gactaccgca gcaggcattt tgctgatggc tttcctctct tgcctgctgc
      301 tgcccgcccc cgcactgggg ctgacgctgg cacaaaaact ggtgaccatg ttccatctga
      361 tggatcttag ccagctttac actttattgt tttgtctgtg gtttttagtg ctgggcgcta
      421 ttgagtattt tgttctgcgc tttatctggc gacgctggtt ctcgctggcg gattaaacgt
      481 cgattatcgc cgtacttcgc ggcatacttt gcttattctc cttcgcctaa aggaacgttt
      541 atggataagc aatcactgca cgaaacggcg aaacgcctgg cccttgagtt accctttgtc
      601 gagctttgct ggccttttgg cccggagttc gatgttttta aaattggcgg caaaattttt
      661 atgctgtcgt cggagctgcg cggcgtcccc tttatcaatc tgaagtccga tccacaaaaa
      721 tccctgttaa atcagcagat atacccgagc attaagccag ggtatcacat gaataaaaag
      781 cactggattt cggtgtatcc cggcgaggaa atctccgaag cgttacttcg cgatctgatc
      841 aacgattcgt ggaatctggt ggttgatggt ctggctaaac gcgatcaaaa aagagtgcgt
      901 ctaggctaaa gcggaaatct atagcgcatt tttctcgctt accatttctc gttgaaccct
      961 gtaatctgct ggcacgcaaa attactttca catggagtct ttatggatat catttctgtc
     1021 gccttaaagc gtcattccac taaggcattt gatgccagta aaaaacttac cccggaacag
     1081 gccgagcaga tcaaaactct cctgcaatac agcccatcca gcaccaactc ccagccgtgg
     1141 cattttattg ttgccagcac ggaagaaggt aaagcgcgtg ttgccaaatc cgctgccggt
     1201 aattatatgt tcaacgaacg taaaatactt gatgcctcgc acgtcgtggt gttctgtgca
     1261 aaaaccgcga tggtcgatgc ctggctgaag ctggttgttg accaggaaga tgctgatggc
     1321 cgctttgcca cgccggaagc gaaagccgcg aacgataaag gtcgcaagtt cttcgctgat
     1381 atgcaccgta aagatctgca tgatgatgca gagtggatgg caaaacaggt ttatctcaac
     1441 gtcggtaact tcctgctcgg cgtggcggct ctgggtctgg acgcggtacc catcgaaggt
     1501 tttgacgccg ccatcctcga tgcagaattt ggtctgaaag agaaaggcta caccagtctg
     1561 gtggttgttc cggtaggtca tcacagcgtt gaagatttta acgctacgct gccgaaatct
     1621 cgtctgccgc aaaacatcac cttaaccgaa gtgtaattct ctcttgccgg gcatctgccc
     1681 ggctatttcc cctcagattc tcctgatttg cataaccctg tttcagccgt catcataggc
     1741 tgctgttgta taaaggagac gttatgcagg atttaatatc ccaggttggg gatttagcgg
     1801 gtattgagat cgatcacacc acctcgatgg tgatgatttt cggtattatt tttctgaccg
     1861 ccgtcgtggt gcatattatt ttgcattggg tggtactgcg gaccttcgaa aaacgtgcca
     1921 tcgccagttc acggctttgg ttgcaaatca ttacccagaa taaactcttc caccgtttag
     1981 cttttaccct gcaggggatt atcgtcaata ttcaggcggt attctggctg caaaaaggca
     2041 ccgaagcggc agatattctg actacctgcg cgcagttgtg gatcatgatg tatgcgctgc
     2101 tttcagtctt ctcgttgctg gatgttattt tgaatctggc gcagaaattc ccggcggcat
     2161 ctcagttacc gctgaaaggg atatttcagg ggattaaact gatcggcgca atcctggtcg
     2221 gcattttgat gatctcgctg ctgattggtc agtcgccagc gattctgatc agcggtcttg
     2281 gtgcaatggc tgccgtgctg atgttggtat ttaaagatcc gattcttggt ctggtggcag
     2341 gtattcagct ttccgcgaac gatatgctga aactgggcga ctggctggag atgccgaaat
     2401 acggcgcgga tggcgcggtg atcgatattg ggttaaccac cgtcaaagtg cgtaactggg
     2461 acaataccat taccactatt cccacctggt ctctggtttc tgactccttt aaaaactgga
     2521 gcgggatgtc agcatctggc gggcgacgta ttaagcgcag tatcagtatt gatgtcacca
     2581 gtattcgttt tcttgatgaa gacgaaatgc aacgtctgaa taaagcgcac ttgttaaaac
     2641 cttatttaac cagccgccat caggaaatta atgagtggaa tcgccagcaa ggttctacgg
     2701 agtcgatatt aaacctgcgc cgaatgacca atattggaac ctttcgtgcc tatctgaacg
     2761 aatatctgcg taaccatccg cggattcgta aagatatgac cttaatggta cgccaactgg
     2821 ctccaggtga taacggttta ccgctcgaga tctacgcgtt taccaacacc gtggtgtggc
     2881 tggaatatga aagcattcag gctgatatat tcgatcacat atttgcgatt gtcgaagagt
     2941 ttggtctgcg acttcatcag tcgccagccg gcaatgatat tcgctctctg gcgggtgcat
     3001 ttaagcagta attaaaaaaa ccgctctcat cgaatggatg agagcggaca tcgttttgtc
     3061 ggatgtagcg tgaatgcctt atttccgacg cagcgtttta aatgccacaa acaggaatac
     3121 aatccacacc ggcagcagga tcgctgacaa gcgcatatca tccatcgtgc acatcagcag
     3181 caaaatcatg ccgaggaagg caatgcaaag atagttgccg aacggataaa gcagcgcctt
     3241 aaactgtgtt tcacgtccct gacgtcgcat cgccgcgcga aaacgcagat gcgccaggca
     3301 gatcataatc cagttcaaca gcagcgttgc taccaccagc gccatcagca gaccaaacgc
     3361 tttttgcggc agcagatagt tgattaacac caccagcgaa gtgatcgctc cggaaagcat
     3421 cagcgagtta atcggcacgc cgcgatggct gacgcgagtc aaaaacttcg gcgcattacc
     3481 ctgcacagaa aggccaaaca gcatgcggct gttagagtaa accccgctgt tatacactga
     3541 cagcgatgct accagaatga cgaagttcag cgcagaagct acctcgttgc tgtcgagatt
     3601 atggaaaatc atcacaaacg ggctactgtt ggatttcact tccacccacg gatagagcgc
     3661 cagtaaaacc accagtgaac cgatgtaaaa cagcaggatg cgatacacca cctgatttac
     3721 cgcttttgga atgctttttt ccggatcgcg cgcttcagcg gcagtaatcc caatcagctc
     3781 cagaccgccg aaggagaaca taattaccgc cagcgacaaa atcagcccat tccagccggt
     3841 ggcgaagaaa ccaccgtagc accagaggtt gtcgatactg gctttctcgc cgccgtgacc
     3901 agaaaacagc agccacaggc caaagccgat cataccgatg attgccagca ctttaatcaa
     3961 cgcaaaccag aactcggttt cgccatataa gcgcacgttc accaggttaa cggcgttgat
     4021 gataataaag aaggcggcag cccaaatcca cgttggaaca tccgggaacc agtactgcat
     4081 atagatgccc gcagcggtca gctctgccat tcccaccagc acgaacatta cccagtagtt
     4141 ccagccagag aggaagcccg caaacggtcc ccagtattta taggcaaagt gggcaaatga
     4201 accggatacc ggctcttcga ccaccatctc gccgagctgg cgcataatca ggaaagcgat
     4261 gatcccggcg acgccgtagc ccagcaatac agccggaccc gccatctgaa tcgccgggcc
     4321 aatgccaaga aacagaccag taccaattgc gccacccagc gcaatcagtt gaatatgacg
     4381 gttatgtaat ccgcgatgaa gcgtcggctc ttgattcgac gcagtatctt ccgatacggt
     4441 tgacgcgttt ttcacgcctt tcccctgtgt gtcttttttg ttgaggggca ccttttaaca
     4501 tttagtgccc atcgtcgcaa gacacaatcc acacggttaa acggggtatc ctgcttttat
     4561 ttccgtaccc gatgtcggtg cagccacatc agcttatacg ccgccgggat aataaacagc
     4621 gacagcaaag gcgcggtgat catgccgcca atcatcggtg cggcaatccg gctcatcacc
     4681 tctgaaccag cccccgttcc ccacagaatc ggcagcagac cggcgataat caccgccacc
     4741 gtcatcgctt tcgggcgcac gcgcagtacc gcgccgtgat acaacgcctc atccagcttc
     4801 tgctcactga atgtttgcgg attattcaac gacggctcgg cctctatggc gtgacgtaaa
     4861 tacatcagca tcaccacgcc aaattcggcg gcgcccccgg caagggcaat aaaaccggtg
     4921 cccgttgcca cagaaagatg aaagcccatc caccacagca accagatgcc gcccaccagc
     4981 gcaaacggta cgctgctgat aatcagcaac gcttcgccca cccgacggaa tgccagatac
     5041 aacagcacga agatgatcat cagtgtcatc ggcaccatga gtttcagctt atggttggcg
     5101 cgctccagta gctcgaactg cccggagaat gccacgctgg tgcccggttt taactgcact
     5161 ttttcaacta tcgctttttg caaatcgtga accaccgaca ccatgtcacg atcgcgggca
     5221 tcgatataaa tccagctcgt cgggcgcgca ttctcggttt tcagcatcga cggtccggta
     5281 gagactttaa cgtcggccac gtctgccagg gtgatttgct gcttcatcgg cgtcaggatc
     5341 ggtagctggc gcagtgcctg cgggctatcg cgccagcttt gcggataacg cagattaatg
     5401 ggataacggg caatcccttc caccgtttcg ccaaccatcg ccccgcccac cgcagaagtc
     5461 acaaacaact gcacatccgc caccgtcata ccgtaacgcg cggctttttc acggttaatc
     5521 tcaacgttga tatagcgccc accttccaga cgctcggcaa gcgcagaagc cacgcctggc
     5581 accgttcgcg ctacttcttc aatttgctca gccatcgcgt cgatatccgc cagcacagtg
     5641 ccggaaactt taatgccgat ggggctttta atgccggttg agagcatatc gatacggtta
     5701 cgaattggcg gcacccacag attcgccagc cccggcagcc gcacggtgtt atccagtccc
     5761 tcaatgattt tgtccatcgt catgccaggc cgccactgat cctgcggctt aagctggatg
     5821 gtcgtttcaa ccatctcgag cggagcagaa tcggtggcgg tttccgcttt cccggttttg
     5881 ccaaataccc gcgccacttc aggtacgctc ataattagct tgtcggtttt ttgcagcata
     5941 ctcgccgcct ctgctgcgga aatccccggc agcgtcgatg gcatatacaa caagtcgcct
     6001 tcattgatct gcggtaaaaa ttccccgcca actttattga gcggccagag aaccgtcagc
     6061 accgaaagcg ctgccaccaa cagcgtggtt ttcggccagt gcagtacttt cagcaataga
     6121 ggatgataaa cacgaatcaa aaagcgattg agcgggttac tgctttccgg cggaattttg
     6181 ccacggatcc agtaacccat caggatcggg atcactacga tcgccagcag cgccgcaccc
     6241 gccatcgcat acgttttggt gaacgccagc gggccaaaca gacgcccttc ttgcccttcc
     6301 agggtgaaga ttggaataaa cgacagcgtg ataatcagca gactgataaa cagcgccggc
     6361 cccacttcaa cagatgcatc ggtaatcacc tgccagcgcg ttttattatc cagcgtggcg
     6421 tcaggatgct ggtgctgcca ctcttccagc cgtttatgcg cattctcgat catgacgata
     6481 gcagcatcga ccatcgcccc gacggcaatc gcaatgccac ccaacgacat aatattggca
     6541 ttcagtccct ggaagtgcat gacaataaaa gcaatacaca accccagcgg caacgaaata
     6601 atcgccacca gcgccgagcg cacatgccag agaaacagcg cacagactac cgccaccaca
     6661 ataaactctt ccagcaactt gccgctgagg ttgtcgatgg cgcggtcaat gagctgactg
     6721 cgatcgtatg ttgtaactat ctccacgcct tccggcagac tacttttcag cgtttccagt
     6781 ttgtccttca cggcggcgat cacttctcgg gcgtttttgc cggagcgcag gatcaccacc
     6841 ccgcccgcca cttcgccttc gccgttcagt tcggcaatgc cccggcgcat ctccgggcca
     6901 acctggacct tcgcaacatc gcgcagataa acgggcacgc cattttcact ggcttttaaa
     6961 acgatgtgat taaagtcgtc gagcgtttgc agatagccgc tggcgcgcac catatattcc
     7021 gcttccgcca gttcgatcga cgaaccgccc gcttcctagt ttgaagcatc cagcgcgctt
     7081 tttacttcgg cgagactgat gccatactgc gccaggcgct ggggatcgat aaccacctga
     7141 tactctttca ccacaccgcc caccgacgcc acttccgcaa cgtcagggat ggttttcagc
     7201 tcatatttga gaaaccagtc ctgtaatgag cgtaaatcgg ccagatcgtg cttaccgctg
     7261 cgatccacca gtgcatattc atagatccag ccaacacccg tggcatctgg ccccagctcg
     7321 gcgctgactc ccgcaggcag cttaccctgt acctggttga ggtactccag cacccgcgaa
     7381 cgcgcccagt acggatcggt accatcttcg aaaatgacat acacataaga gtcgccaaac
     7441 tgcgagaaac cacgcacagt cttcgcgcca ggcaccgaca acatggtggt ggttagcgga
     7501 taagtcacct gattttcaac gatttgcggt gcctgcccgg gatagctggt tttaataatc
     7561 acctgcacat cggagagatc cggcagcgca tccactggcg tattaatgat ggtccaggtg
     7621 ccccagatgc taagaaacaa cgcgcccatc agcaccaaaa aacggttcgc caccgagcga
     7681 cgaataatcc attcaatcat tggttattcc ctcaatgcgc atgggtagca ctttcagagc
     7741 gcatccgctc cagtgcgcca gaaatattgg cttcggaatc aatcaggaaa aggccgctgg
     7801 aaaccacctt ttcaccttcc gccagaccag agcgtaatgc ggtgacacct tgcgatgcct
     7861 ggaaaacggc aacgcgtttc ggtacaaagc gcccgtcggc atcaatggta atcacccgct
     7921 gttcgctacc ggtatcaatc agcccttgtg acggaatgag cagcatcggt tcgctggcgg
     7981 tattgagttg caaccaggcg ttcatgcccg gttttagcgc ctcgtcggcg ttgtcgactt
     8041 ccagacgcag ctgcagcgtg caggtcgcgg catccacgcc gggtagcagc gtccatttgc
     8101 ggatggtgag tgttttatcc ggtcgtgccg gaacggtgag cgtaaactgc gaggcatctt
     8161 tcaccagcca ggcgatagac tccgggatcg cagcagtgac ccacaccggg tccataccct
     8221 gaattttcgc taccacgtta tctttggcga tattcattcc cgcgcgcaga tcaaacgcgg
     8281 tgatcacgcc atcaatgggc gctttgagcg taaagcgagt ctggattttt tgcgtggcga
     8341 tcaggcggcg aatatccgcc tccggcattc ccgccagtcg cagccgctca agaatgcctt
     8401 cagtctgggt cgccgtaccg ccggtttcgc gcagcagtaa atactcactc tgcgcttcca
     8461 cccagtcagg aatggtcagg tcgagaagcg gtgtgccctt ttgtacttta tcgcccacgg
     8521 taagcggata caccttgtcg ataaacccgg cagcgcgagc ctgcacaatg gcatactgat
     8581 actcgttgta actgacattc gccgggaaac tctgggcaaa agtcagcggt ccgcgcgtga
     8641 cggtagccgt tttcaccccc agattctgcg tctgagtcgg gtcaatgcgc acaccagacg
     8701 cagaactctc ttcatcggca tatttcggca ccagatccat atccataaac ggcgatttac
     8761 ctggtttatc gaaccgcgta ttggggtaca tcgggtcgta ccagaataag attttacgtt
//
LOCUS       DADMHC010000164         8809 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.167, whole genome shotgun sequence.
ACCESSION   DADMHC010000164 DADMHC010000000
VERSION     DADMHC010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8809)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8809)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8809
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.167"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..221
                     /locus_tag="JNZ57_003184"
     CDS             <1..221
                     /locus_tag="JNZ57_003184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8829295.1"
                     /translation="QTVIYRIHPDARNRLTAGYMTSYFIGGAAGSLISASAWQHGGWA
                     GVCLAGATIALVNLLVWWRGFHRQEAAN"
     gene            345..1082
                     /locus_tag="JNZ57_003185"
     CDS             345..1082
                     /locus_tag="JNZ57_003185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HAY8829296.1"
                     /translation="MESPTPQPALGSATFMEGCKDSLPIVISYIPVAFAFGLNATRLG
                     FSPLESVFFSCIIYAGASQFVITAMLAAGSSLWVAALTVMAMDVRHVLYGPSLRSRII
                     QRLQKSKTALWAFGLTDEVFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGA
                     FSGSGLLQGYPAVEAALGFMLPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIP
                     VAILAGIVCGCLTALIQAFWQGAPDEL"
     gene            1072..1407
                     /gene="ygaH"
                     /locus_tag="JNZ57_003186"
     CDS             1072..1407
                     /gene="ygaH"
                     /locus_tag="JNZ57_003186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-valine transporter subunit YgaH"
                     /protein_id="HAY8829297.1"
                     /translation="MSYEVLLLGLLVGVANYCFRYLPLRLRVGNARPTKRGAVGILLD
                     TIGIASICALLVVSTAPEVMHDTRRFVPTLVGFAVLGASFYKTRSIIIPTLLSALAYG
                     LAWKVMAII"
     gene            complement(1426..1527)
                     /locus_tag="JNZ57_003187"
     CDS             complement(1426..1527)
                     /locus_tag="JNZ57_003187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005228386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829298.1"
                     /translation="MFNGRKRTIHLGMTSLISADIVTTVTNKVNVLF"
     gene            1498..2028
                     /gene="emrR"
                     /locus_tag="JNZ57_003188"
     CDS             1498..2028
                     /gene="emrR"
                     /locus_tag="JNZ57_003188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter EmrAB
                     transcriptional repressor EmrR"
                     /protein_id="HAY8829299.1"
                     /translation="MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENR
                     NKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIE
                     RRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLS
                     RLDQMEQDGVVLEAMS"
     gene            2155..3327
                     /gene="emrA"
                     /locus_tag="JNZ57_003189"
     CDS             2155..3327
                     /gene="emrA"
                     /locus_tag="JNZ57_003189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter periplasmic
                     adaptor subunit EmrA"
                     /protein_id="HAY8829300.1"
                     /translation="MSANAETQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFL
                     VLRHFEETDDAYVAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFE
                     KAKTALASSVRQTYQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREEL
                     QHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRI
                     VSPMTAYVSRRAVQPGAQISPTTPLMAVVPATNMWVDANFKETQIANMRIGQPVTITT
                     DIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYS
                     LRIGLSTLVSVNTTNRDGQVLANKVRSTPVAVSTAREISLAPVNKLIDDIVKANAG"
     gene            3344..4918
                     /gene="emrB"
                     /locus_tag="JNZ57_003190"
     CDS             3344..4918
                     /gene="emrB"
                     /locus_tag="JNZ57_003190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter permease
                     subunit EmrB"
                     /protein_id="HAY8829301.1"
                     /translation="MQQQKPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNL
                     GSSLSQGTWVITSFGVANAISIPLTGWLAKRVGEVKLFLWSTIAFAIASWACGVSSSL
                     NMLIFFRVIQGIVAGPLIPLSQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGY
                     ISDNYHWGWIFFINVPIGVAVVLMTLQTLRGRETRTERRRIDAVGLALLVIGIGSLQI
                     MLDRGKELDWFSSQEIIILTVVAVVAVVAVVAVVAVVAICFLIVWELTDDNPIVDLSL
                     FKSRNFTIGCLCISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASAPVGIIPVILSP
                     IIGRFAHKLDMRRLVTFSFIMYVVCFYWRAYTFEPGMDFGASAWPQFIQGVAVACFFM
                     PLTTITLSGLPPERLAAASSLSNFTRTLAGSIGTSITTTMWTNRESMHHAQLTESVNP
                     FNPNAQAMYSQLEGLGMTQQQASGWIAQQITNQGLIISANEIFWMSAGIFLVLLGLVW
                     FAKPPFGAGGGGGGAH"
     gene            complement(4982..5497)
                     /gene="luxS"
                     /locus_tag="JNZ57_003191"
     CDS             complement(4982..5497)
                     /gene="luxS"
                     /locus_tag="JNZ57_003191"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008458247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HAY8829302.1"
                     /translation="MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPN
                     KEVMPERGSHTLEHLFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVAD
                     AWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
                     LPKEKLQELHI"
     gene            complement(5647..7203)
                     /gene="gshA"
                     /locus_tag="JNZ57_003192"
     CDS             complement(5647..7203)
                     /gene="gshA"
                     /locus_tag="JNZ57_003192"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HAY8829303.1"
                     /translation="MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTLATTGH
                     PEALGSALTHKWITTDFAEALLEFITPVDGDIEHMLTFMRDLHRYTARNMGDERMWPL
                     SMPCYIAEGQDIELAQYGTSNTGRFKTLYREGLKNRYGALMQTISGVHYNFSLPMAFW
                     QAKCGDISGTDAKEKISAGYFRVIRNYYRFGWVIPYLFGASPAIFSSFLQGKPTSLPF
                     EKTECGMYYLPYATSLRLSDLGYTNKSQSNLGITFNDLYEYVAGLKQAIKTPSEEYAK
                     IGIEKDGKRLQINSNVLQIENELYAPIRPKRVTRSGESPSDALLRGGIEYIEVRSLDI
                     NPFSPIGVDEQQVRFLDLFMVWCALADAPEMSSSELACTRVNWNRVILEGRKPGLTLG
                     IGCETAQFPLPQVGKDLFRDLKRVAQTLDSINGGEAYQKVCDELVACFDNPDLTFSAR
                     ILRSMIDTGIGGTGKAFAEAYRNLLREEPLEILREEDFVAEREASERRQQEMETADTE
                     PFAVWLEKHA"
     gene            complement(7276..7704)
                     /locus_tag="JNZ57_003193"
     CDS             complement(7276..7704)
                     /locus_tag="JNZ57_003193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY8829304.1"
                     /translation="MSEALSLFSLFARSFLSATLLPGNSEVVLVAMLLSGISYPWVLV
                     LTATMGNSLGGLTNVILGRFFPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLC
                     LLAGWMRISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH"
     gene            complement(7701..8264)
                     /gene="yqaB"
                     /locus_tag="JNZ57_003194"
     CDS             complement(7701..8264)
                     /gene="yqaB"
                     /locus_tag="JNZ57_003194"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-1-phosphate/6-phosphogluconate
                     phosphatase"
                     /protein_id="HAY8829305.1"
                     /translation="MYERYAGLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDVQAMI
                     ALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVRSMLLDSVEPLPLVEVVKSWHGR
                     RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADHVKHHKPAPDTFLCAQRMGVQPTQ
                     CVVFEDADFGIQAARAAGMDAVDVRLL"
     gene            complement(8545..8621)
                     /locus_tag="JNZ57_003195"
     tRNA            complement(8545..8621)
                     /locus_tag="JNZ57_003195"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8585..8587),aa:Arg,seq:acg)
BASE COUNT         2055 a         2304 c         2234 g         2216 t
ORIGIN      
        1 accagacggt aatttatcga atacaccctg atgcgcgtaa tcgcctgacc gcaggttaca
       61 tgaccagcta ctttattggc ggtgccgccg gttcgctaat ttcagcctca gcctggcaac
      121 atggcggttg ggctggtgtt tgtctggctg gcgcgacgat tgccctggtt aacttactgg
      181 tctggtggcg aggttttcat cgtcaggaag ccgcaaatta agcaatcagc aaccgttttc
      241 gtggctttac acttataagg gtgttaagaa gcccatcagt ctgataaggt taagatattc
      301 attcagtcta tttataatat taacaatcgt taagcgtaca ctctatggaa agccctactc
      361 cacagcctgc tcttggttcg gcgaccttca tggaaggatg caaagacagt ttaccgattg
      421 ttattagtta tattccggtg gcctttgcgt tcggtctgaa tgcgacccgt ctgggattct
      481 ctcctctcga aagcgttttt ttctcctgca tcatttatgc aggcgcgagc cagttcgtca
      541 ttaccgcgat gctggcagcc gggagtagtt tgtgggttgc tgcactgacc gtcatggcaa
      601 tggatgttcg ccatgtgttg tatggcccgt cactgcgtag ccgtattatt cagcgtctgc
      661 aaaaatcgaa aaccgccctg tgggcatttg gcctgacgga tgaggttttt gccgctgcaa
      721 ccgcaaaact ggtacgcaat aatcgccgct ggagcgagaa ctggatgatc ggcattgcct
      781 tcagttcatg gtcatcgtgg gtatttggta cggtaatagg ggcattctcc ggcagcggct
      841 tgctgcaagg ttatcccgcc gttgaagctg cattaggttt tatgcttccg gcactcttta
      901 tgagtttcct gctcgcctct ttccagcgca aacaatctct ttgcgttacc gcagcgttag
      961 ttggtgccct tgcaggcgta acgctatttt ctattcccgt cgccattctg gcaggcattg
     1021 tctgtggctg cctcactgcg ttaatccagg cattctggca aggagcgccc gatgagctat
     1081 gaggttctgc tgcttgggtt actggttggc gtggcgaatt attgcttccg ctatttgccg
     1141 ctgcgcctgc gtgtgggtaa tgcccgccca accaaacgtg gcgcggtagg tattttgctc
     1201 gacaccattg gcatcgcctc gatatgcgct ctgctggttg tctctaccgc accagaagtg
     1261 atgcacgata cacgccgttt cgtgcccacg ctggtcggct tcgcggtact gggtgccagt
     1321 ttctataaaa cacgcagcat tatcatccca acactgctta gtgcgctggc ctatgggctc
     1381 gcctggaaag tgatggcgat tatataaccc acaagaatca tttttctaaa acaatacatt
     1441 tactttattt gtcactgttg ttactatatc ggctgaaatt aatgaggtca tacccaaatg
     1501 gatagttcgt ttacgcccat tgaacaaatg ctaaaatttc gcgccagccg ccacgaagat
     1561 tttccttatc aggagatcct tctgactcgt ctttgcatgc acatgcaaag caagctgctg
     1621 gagaaccgca ataaaatgct gaaggctcag gggattaacg agacgttgtt tatggcgttg
     1681 attacgctgg agtctcagga aaaccacagt attcagcctt ctgaattaag ttgtgctctt
     1741 ggatcatccc gtaccaacgc gacgcgtatt gccgatgaac tggaaaaacg cggttggatc
     1801 gaacgtcgtg aaagcgataa cgatcgccgc tgcctgcatc tgcaattaac ggaaaaaggt
     1861 cacgagtttt tgcgcgaggt tttaccaccg cagcataact gcctgcatca actctggtcc
     1921 gcgctcagca caacagaaaa agatcagctc gagcaaatca cccgcaaatt gctctcccgt
     1981 ctcgaccaga tggaacaaga cggtgtggtt ctcgaagcga tgagctaacg cgtcatctcg
     2041 ctcaaaaatc cagatttata aaagaaaaaa tgaccggcca gcatcgcaac atgctggcct
     2101 ttttggcaag caggtcggct cagccgatga gttaagaaga tcgtggagaa caatatgagc
     2161 gcaaatgcgg agactcaaac cccgcagcaa ccggtaaaga agagcggcaa acgtaagcgt
     2221 ctgctcctcc ttctcacctt gctctttata attattgccg tagcgatagg gatttattgg
     2281 tttttggtac tgcgtcattt cgaagaaacc gatgacgcat acgtggcagg gaatcagatt
     2341 caaattatgt ctcaggtgtc tggcagcgtg acgaaagtct gggccgataa caccgatttt
     2401 gtaaaagaag gcgatgttct ggtcactctc gacccgacag atgctcgcca ggcgtttgaa
     2461 aaagccaaaa ctgcactggc ttccagcgtt cgccaaacct accagctgat gattaacagc
     2521 aaacagttac aggcgaatat tgaggtgcaa aaaatcgccc tcgcgaaagc acaaagcgac
     2581 tacaaccgcc gtgtgccgct gggcaatgcc aacctgattg gtcgcgaaga gctgcaacac
     2641 gcccgcgacg ccgtcaccag tgcccaggcg caactggacg tcgctattca acaatacaat
     2701 gccaatcagg cgatgattct ggggactaaa ctggaagatc agcctgccgt gcaacaggct
     2761 gccaccgaag tacgtaacgc ctggctggcg ctggagcgta cccgtattgt cagtccgatg
     2821 accgcttatg tctcccgccg cgcggtacag cctggggcgc aaattagccc aacgacgccg
     2881 ctgatggcgg tcgttccagc caccaatatg tgggtggatg ccaactttaa agagacgcag
     2941 attgccaata tgcgtatcgg tcagccggtc actatcacca cggatattta cggcgatgat
     3001 gtgaaataca ccggtaaagt ggttggtctg gatatgggca caggtagcgc attctcactg
     3061 cttccggcgc aaaatgcgac cggtaactgg atcaaagtcg ttcagcgtct acctgtgcgt
     3121 atcgaactgg accagaaaca gctggagcaa tactcgctgc gcattggttt gtccacgctg
     3181 gtgagcgtca ataccactaa ccgtgacggt caggtactgg caaataaagt acgttcaaca
     3241 ccggtcgcgg taagtaccgc gcgtgaaatc agcctggcac ctgtcaataa actgatcgac
     3301 gatatcgtaa aagctaacgc tggctaatcc agaggtgcgt gtgatgcaac agcaaaaacc
     3361 gctggaaggc gcgcaactgg tcattatgac gattgcgctg tcactggcga cattcatgca
     3421 ggtgctggac tccaccattg ctaacgtggc gatccccact atcgccggga atctgggctc
     3481 atcgctcagc cagggaacgt gggtaatcac ttctttcggg gtggcgaatg ccatctcgat
     3541 cccgcttacc ggctggctgg caaagcgcgt cggggaagtg aaactgttcc tttggtccac
     3601 catcgccttt gctattgcgt cgtgggcgtg tggtgtctcc agcagcctga atatgctgat
     3661 cttcttccgt gtgattcagg ggattgtcgc tgggccgttg atcccacttt cgcaaagtct
     3721 tttgctgaat aattacccgc cagccaaacg ctcaatcgcg ctggcgttgt ggtcgatgac
     3781 ggtgattgtc gcgccaattt gcggcccaat cctcggcggt tatatcagcg ataattacca
     3841 ctggggctgg atattcttca tcaacgtgcc aattggcgtg gcggtggtgt tgatgacact
     3901 gcaaaccctg cgcggacgcg aaacccgcac cgaacggcgg cggattgatg ccgtggggct
     3961 ggcactgctg gttattggta tcggtagcct gcagattatg ctcgaccgcg gtaaagagct
     4021 ggactggttt tcatcacagg aaattatcat tcttaccgtg gtggcggtgg tggcggtggt
     4081 ggcggtggtg gcggtggtgg cggtggtggc tatctgcttc ctgattgtct gggagctgac
     4141 cgacgataac ccgatagtcg atctgtcgtt gtttaagtcg cgcaacttca ccatcggctg
     4201 cttgtgtatc agcctcgcgt atatgctcta cttcggcgcg attgttctgc tgccgcagtt
     4261 gttgcaggag gtctacggtt acacggcgac ctgggcaggt ttggcctctg cgccggtagg
     4321 gattattccg gtgatcctgt cgccgattat cggccgcttc gcgcataaac tggatatgcg
     4381 gcggctggta accttcagct ttattatgta tgtcgtctgc ttctactggc gtgcctatac
     4441 ctttgaacca ggtatggatt ttggcgcgtc ggcctggccg cagtttatcc agggggttgc
     4501 ggtggcctgc ttctttatgc cgctgaccac cattacgctg tctggtttgc caccggaacg
     4561 actggcggcg gcatcgagcc tctctaactt tacgcgaacg ctggcggggt ctatcggcac
     4621 gtcgataacc acgaccatgt ggaccaaccg cgagtcgatg caccatgcgc agttgactga
     4681 gtcggtaaac ccgttcaacc cgaatgccca ggcgatgtac agtcaactgg aagggcttgg
     4741 gatgacgcaa cagcaggcat caggctggat tgcccagcag atcactaatc aggggctgat
     4801 tatttccgcc aatgagatct tctggatgtc agccgggata ttcctcgtcc tgctggggct
     4861 ggtgtggttt gctaaaccgc cctttggcgc aggtggcggc ggaggtggtg cgcactaagt
     4921 acaactaagc cagttcattt gaactggctt ttttcaatta attgtgaaga tagtttactg
     4981 actaaatgtg cagttcctgc aacttctctt tcggcagtgc cagttcttcg ttgctgttga
     5041 tgcgtacgtc acgttccaga atgctacgcg caatatcctg cgcttcctgc aacgagtgca
     5101 tctggtaagt gccacactgg tagacgttca gctccgggat ctgattctga tcctgcactt
     5161 tcagcacgtc ttccattgcc gctttccagg catcagcaac acgctgctca tctggcgtac
     5221 caatcagact catataaaaa ccggtgcggc agcccattgg cgagatatcg ataatctcta
     5281 caccattacc gttaagatgg ttacgcataa aaccagcaaa caggtgctcc agagtatggc
     5341 tccctctttc tggcatcact tctttgttcg gcacgcagaa gcgcagatcg aacacggtga
     5401 ttgcgtcgcc atgcggggtg ttcattgttt tcgccacccg aactgcaggc gcttccatcc
     5461 gggtatgatc gactgtgaag ctatctaaca acggcattta gccacctccg gtaatttttt
     5521 taaaaatttt ctgaactctt tcttcccagg cgagtctgag tatatgaaag acgcgcattt
     5581 gttatcatca tccctgaatt cagagatgaa attttggcca ctcacgagtg gcctttttct
     5641 tttctgtcag gcgtgttttt ccagccacac cgcaaacggt tcggtatcag cggtttccat
     5701 ttcctgctga cggcgttcag atgcctcgcg ctcggctaca aaatcctctt cgcgcagaat
     5761 ttccaacggc tcttcacgca gcagattacg gtaggcttct gcaaacgctt tgcctgttcc
     5821 gccaatacca gtatcaatca tagaccttaa gatacgggca gagaaagtca gatcgggatt
     5881 atcgaagcag gcgaccagtt catcacacac tttctgatac gcttcgccgc cgttaatgct
     5941 atccaacgtt tgcgcgacgc gtttcagatc gcggaacaga tctttaccca cctgcggtaa
     6001 cgggaactgc gcggtttcgc agccgatacc cagcgtcagg cccggtttgc gaccttcgag
     6061 gatcacccgg ttccagttaa cgcgtgtaca ggcaagttcg ctactgctca tttccggtgc
     6121 atcagccagc gcacaccaga ccataaacag gtcgaggaat cgcacctgct gttcatctac
     6181 accaatcggc gagaacgggt tgatgtccag cgaacgcact tcaatatatt caatgccgcc
     6241 acgtaacagc gcatcagaag gtgactcgcc gctgcgggta acgcgttttg gacgaatcgg
     6301 cgcatacagt tcgttttcaa tttgcagcac gttgctattg atttgcagcc tcttaccgtc
     6361 tttctcaata ccaatcttcg cgtactcttc cgatggcgtt ttgattgcct gtttaaggcc
     6421 cgctacgtac tcgtaaagat cgttgaaggt aataccaaga ttgctttgcg atttattggt
     6481 atagccgaga tcgctcaaac gaagagaggt cgcatacggc aggtaataca taccgcactc
     6541 ggttttctca aacggcagcg acgttggttt tccttgcagg aaagaagaaa aaatcgccgg
     6601 agatgcacca aacagataag gaatgaccca accgaaacga tagtaattgc ggataacgcg
     6661 gaaatagccc gcagaaattt tctctttggc atcagtgccc gagatatcac cgcacttcgc
     6721 ttgccagaat gccattggca aagagaaatt gtagtgcacg ccggaaatgg tttgcatcag
     6781 cgcgccgtag cgatttttca gcccttcacg atacagcgtt ttaaagcgtc cggtgttaga
     6841 agtgccgtac tgtgccagtt cgatgtcctg accttctgcg atgtagcatg gcatacttaa
     6901 cggccacatc cgctcatcgc ccatattgcg cgccgtataa cgatgcagat cgcgcataaa
     6961 ggtcaacata tgttcaatat caccatccac tggtgtaatg aattccagca atgcttccgc
     7021 aaaatcggta gtaatccatt tgtgcgtcag tgcggaacct aatgcttcag gatgacctgt
     7081 tgttgccagt gtgccatcag cattaacacg caaagtttcg cgctccagcc cacgctgtat
     7141 cccctttaac gcctgaggat gtttttccag ccaggccagc gcctgtgata cgtccgggat
     7201 caaattgacc tcccgcctgt caaaatcgtt ttaattagca taactgtaat ggtgaccata
     7261 tgtgcaggcc tacaattagt gccaccacat catgccctga acggtagctg ctgcaactgc
     7321 aacatagcgt aacgctttac caaggcacaa aaaaaagatt accggtcccc acgagatgcg
     7381 catccatccc gctaacagac acagtaaatc gccaaccacg ggcatccagc ttaataatag
     7441 cgtgactgca ccatagcgtt tcagccagcc agtagctttc tcttgccagc gcgatgtttt
     7501 acgcaatgga aagaaacgcc caaggataac gttagttaac cctccaaggc tattacccat
     7561 tgttgctgtt aaaactaaaa cccagggata actgatcccg gaaagcaaca ttgccaccag
     7621 cacgacttcg gagttgccgg gtaatagtgt agcgctgaga aaactacggg caaacaacga
     7681 gaaaagcgat aacgcttcac tcacagcaag cgaacatcca cggcgtccat gcctgctgca
     7741 cgggccgcct gaataccgaa atcggcatct tcaaagacca cacactgcgt cggttgcacg
     7801 cccatacgct gcgcgcacaa aaatgtgtct ggcgcgggtt tatggtgttt gacgtgatca
     7861 gcagcgacga cggcgtcaaa ataacggcgt aatcccaggt gcgccagcaa tgcctcagcg
     7921 atggcgcttt cactccccgt tcctacagcc attgggcgac gaccatgcca acttttcacc
     7981 acttcaacaa gaggaagcgg ctcgacacta tccagcagca tacttcttac tgcttctgtt
     8041 ttttcacgcg ctaacgcatg cgggtcgaga tcggcctgat tcagctcaat aattgcctga
     8101 gcaatacgcc aggtgggcga tccattaagc gcaatcattg cctgaacatc gtactgaaga
     8161 ccgtagtgcc ctaatacttc gcgccacgct ttacggtgcg taggctccgt atccaggatt
     8221 gtgccatcca tatcaaaaat taaacctgca taacgctcgt acatggtctt ctcgcaagtc
     8281 gaaaaatatg acgctacttt agcgtaattg cttgattttg tcgctgatgg cgaaggagaa
     8341 gaaaattcag gaaatggata aagtagttat ttagaaatga gatatttttg aaggaaattt
     8401 ttgggagaag atggtgcatc cgggaggatg actcactggc gttcgccctt cgggccgttg
     8461 ctgacgcaac gttatcctcc ctggtgcctg cggttaatac cgctatctct tcgatacctt
     8521 cattgctgaa ggttacggag aatatggtgc atccgggagg attcgaacct ccgaccgctc
     8581 ggttcgtagc cgagtactct atccagctga gctacggatg catcgggaaa atttatttta
     8641 ctgctgatat tgatatcgct actaaagcca tatcaagtaa gagatggtgc atccgggagg
     8701 attactcgcc ttgcggctcg cccttcgggc cgttgctaaa gcaacgttat catccctggt
     8761 gcctgcggtt aattccgcta cctcttcgat accttcattg ctgaagatt
//
LOCUS       DADMHC010000165         8764 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.168, whole genome shotgun sequence.
ACCESSION   DADMHC010000165 DADMHC010000000
VERSION     DADMHC010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8764)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8764)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8764
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.168"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(169..375)
                     /locus_tag="JNZ57_003196"
     CDS             complement(169..375)
                     /locus_tag="JNZ57_003196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbfA family protein"
                     /protein_id="HAY8829306.1"
                     /translation="MELYREYPAWLIFLRRTYAVAAGVLALPFMLFWKDRARFYSYLH
                     RVWSKTSDKPVWMEQAEKATGDFY"
     gene            688..777
                     /gene="kdpF"
                     /locus_tag="JNZ57_003197"
     CDS             688..777
                     /gene="kdpF"
                     /locus_tag="JNZ57_003197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
                     /protein_id="HAY8829307.1"
                     /translation="MSAGVIAGVLLVFLLLGYLVYALINAEAF"
     gene            777..2450
                     /gene="kdpA"
                     /locus_tag="JNZ57_003198"
     CDS             777..2450
                     /gene="kdpA"
                     /locus_tag="JNZ57_003198"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706533.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HAY8829308.1"
                     /translation="MAAQGFLLIATFLLVLMVLARPLGSGLARLINDIPLPSTAGVER
                     ILFRLPGVSDHEMNWKQYLCAILGLNMLGLAVLFFMLLGQHYLPLNPQQLPGLSWDLA
                     LNTAVNFVTNTNWQSYSGETTLSYFSQMAGLTVQNFLSAASGIAVIFAFIRAFTRQSM
                     STLGNAWVDLLRITLWVLVPVALLIALFLIQQGALQNFLPYQAVNTVEGAQQLLPMGP
                     VASQEAIKMLGTNGGGFFNANSSHPFENPTALTNFVQMLAIFLIPTALCFAFGEVTGD
                     RRQGRMLLWAMSVIFVICVGVVMWAEVQGNPHLLALGADSSINMEGKESRFGVLVSSL
                     FAVVTTAASCGAVIAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVF
                     IAGLMIGRTPEYLGKKIDVREMKLTALAILVTPTLVLMGAALAMMTDAGRSAMLNPGP
                     HGFSEVLYAVSSAANNNGSAFAGLSANSPFWNCLLAFCMFVGRFGVIIPVMAIAGSLV
                     SKKSQPASSGTLPTHGPLFVGLLIGTVLLVGALTFIPALALGPVAEYLS"
     gene            2473..4521
                     /gene="kdpB"
                     /locus_tag="JNZ57_003199"
     CDS             2473..4521
                     /gene="kdpB"
                     /locus_tag="JNZ57_003199"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HAY8829309.1"
                     /translation="MSRKQLALFEPTLVVQALKEAVKKLNPQAQWRNPVMFIVWIGSL
                     LTTCISIAMASGAMPGNALFSAAISGWLWVTVLFANFAEALAEGRSKAQANSLKGVKK
                     TAFARKLREPKYGAAADKVPADQLRKGDIVLVEAGDIIPCDGEVIEGGASVDESAITG
                     ESAPVIRESGGDFASVTGGTRILSDWLVIECSVNPGETFLDRMIAMVEGAQRRKTPNE
                     IALTILLIALTIVFLLATATLWPFSAWGGNAVSVTVLVALLVCLIPTTIGGLLSAIGV
                     AGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQASEFIPAQGVDEKTLA
                     DAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRM
                     IRKGSVDAIRRHVEANGGHFPADVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVK
                     GGIKERFAQLRKMDIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQA
                     ESRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVALDSNPTKLIEVVHIGK
                     QMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNALNIMRLHSPDSAILSAVIFN
                     ALIIVFLIPLALKGVSYKPLTASAMLRRNLWIYGLGGLLVPFIGIKVIDLLLTVCGLV
                     "
     gene            4530..5073
                     /gene="kdpC"
                     /locus_tag="JNZ57_003200"
                     /pseudo
     CDS             4530..5073
                     /gene="kdpC"
                     /locus_tag="JNZ57_003200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308751.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit C"
     gene            5066..7750
                     /gene="kdbD"
                     /locus_tag="JNZ57_003201"
     CDS             5066..7750
                     /gene="kdbD"
                     /locus_tag="JNZ57_003201"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     KdbD"
                     /protein_id="HAY8829310.1"
                     /translation="MNNEPLRPDPDRLLEQTAAPHRGKLKVFFGACAGVGKTWAMLAE
                     AQRLRAQGLDIVVGVVETHGRKDTAAMLEGLAVLPPKRLAYRGRHICEFDLDAALARR
                     PALILMDELAHSNALGSRHPKRWQDIEELQEAGIDVFTTVNVQHLESLNDVVSGVTGI
                     QVRETVPDPFFDAADDVVLVDLPPDDLRQRLKEGKAYIAGQAERAIEHFFRKGNLIAL
                     RELALRRTADRVDEQMRAWRGHPGEEKVWHTRDAILLCIGHNTGSEKLVRAAARLASR
                     LGRVWHAVYVETPALHRLPEKKRRAILSALRLAQELGAETATLSDPAEEKAVVRYARE
                     HNLGKIILGRPASRRWWRRETFADRLARIAPDLDQVLVALDEPPARTINNAPDSRSFK
                     DKWRVQIQGCVVAAALCAVITLIAMQWLMAFDAANLVMLYLLGVVVVALFYGRWPSVV
                     ATVINVVSFDLFFIAPRGTLAVSDVQYLLTFAVMLTVGLVIGNLTAGVRYQARVARYR
                     EQRTRHLYEMSKALAVGRSPQDIAATIEQFIASTFHARSQVLLPDDNGKLQPLTHPQG
                     MTPWDDTIAQWSFDKGLPAGAGTDTLPGVPYQILPLKSGEKTYGLVVVEPGNLRQLMI
                     PEQQRLLETFTLLVANALERLTLTASEEQARMASEREQIRNALLAALSHDLRTPLTVL
                     FGQAEILTLDLASEGSPHARQASEIRQHVLNTTRLVNNLLDMARIQSGGFNLKKEWLT
                     LEEVVGSALQMLEPGLSSPINLSLPEPLTLIHVDGPLFERVLINLLENAVKYAGAQAE
                     IGIDAHVEGENLQLDVWDNGPGLPPGQEQTIFDKFARGNKESAVPGVGLGLAICRAIV
                     DVHGGTITAFNRPEGGACFRVTLPQQTAPELEEFHEDM"
     gene            7747..8424
                     /gene="kdpE"
                     /locus_tag="JNZ57_003202"
     CDS             7747..8424
                     /gene="kdpE"
                     /locus_tag="JNZ57_003202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator KdpE"
                     /protein_id="HAY8829311.1"
                     /translation="MTNVLIVEDEQAIRRFLRTALEGDGMRVYEAETLQRGLLEAATR
                     KPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKP
                     FGIGELQARLRVALRRHSATAAPDPLVKYSDVTVDLAARVIHRGEEEVHLTPIEFHLL
                     AVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETS
                     IGYRFML"
BASE COUNT         1904 a         2256 c         2471 g         2133 t
ORIGIN      
        1 aagtgagata tccatcagat agaaacaatt aggaaaatat ttatatattt ttcctgaata
       61 tatttcagct gggtaatacc atatctaaat atttacctga acatcttcct aataaaaaaa
      121 ccgccagcat ctccactagc ggttttcaat gtattcaaaa ctcggcaatc agtaaaaatc
      181 accggttgcc ttttcggcct gttccatcca aaccggttta tcgctggttt tcgaccagac
      241 gcggtgcagg tagctgtaaa agcgggcgcg gtctttccag aaaagcatga aaggcagcgc
      301 cagaacgccc gctgcaaccg catatgtacg gcgtaaaaag ataagccatg caggatattc
      361 tctgtagagt tccatacttt tctccccctt ttgtatctac ccggtgaata gcaccggaaa
      421 aatgaatttg tttatctgat gaaaatagta ctgccttttg tgtaatttta ctactcatcc
      481 gaccacttat ttttgcttat tgatggttta tttacattca ctctgtaatt aagttacaca
      541 aaagttaaat taatgctaaa cattagttaa atcatggctt ttgccatttt tatacttttt
      601 ttacaccccg cccgcagatt tttgcgaaat ctttgcagcc agaattctac tcttccggta
      661 tcacttttag gccactggag gtgcactgtg agtgcaggcg tgatagccgg cgtgttgctg
      721 gtgtttttat tactgggtta tttggtttat gccctgatca atgcggaggc gttctgatgg
      781 ctgcgcaagg gttcttactg attgccacgt ttttactggt attaatggtg ctggcgcgtc
      841 ctttaggcag cgggctggcg cggctgatta atgacattcc tcttccaagt acagcgggcg
      901 ttgaacgtat actctttcgt ttacctggcg tctctgacca tgagatgaac tggaagcaat
      961 atctttgtgc cattctcggc ctgaacatgc tggggctggc ggtgctgttt tttatgttgc
     1021 tcggtcagca ctatctgccg cttaatccac agcagttgcc ggggctgtcg tgggatctgg
     1081 cgctgaatac cgccgtcaac tttgtcacga ataccaactg gcaatcttat agcggtgaaa
     1141 ccacgttgag ctatttcagc cagatggcag gcttaacggt acaaaacttt ctttctgccg
     1201 ccagcgggat tgcggtgatt tttgccttca tccgtgcgtt tactcgccag agcatgagca
     1261 cactcgggaa tgcctgggtc gatctgctac gcatcacgtt atgggtgcta gtccctgtgg
     1321 cgttgttgat cgcactgttt cttattcaac aaggtgcgct gcaaaacttt ctgccctatc
     1381 aggcagtgaa taccgttgaa ggagcgcaac agctgttacc catgggacca gtagcttctc
     1441 aggaagcgat caagatgctc ggtactaacg gcggtggctt ctttaatgcc aactcgtcgc
     1501 atccgtttga aaacccaacc gcactgacca acttcgtgca gatgctggcg atcttcttga
     1561 tcccaacagc tctgtgcttt gcctttggtg aagtgacggg cgatcgccgc caggggcgca
     1621 tgttgctgtg ggcgatgtca gtgatttttg tcatctgcgt aggcgtggtt atgtgggcag
     1681 aagttcaggg taatcctcat ctgctggcgc tcggcgcaga cagcagcatc aatatggaag
     1741 gtaaagagag ccgtttcggc gtgctggtca gtagcctgtt tgcggtcgtg actacggcgg
     1801 cgtcctgtgg cgcggtgatt gcgatgcatg attcgtttac cgctctcggc ggcatggtgc
     1861 cgatgtggct aatgcaaatt ggtgaagtgg tgttcggcgg tgtcggttct ggtctttacg
     1921 gcatgatgct gtttgtcctg ctggcggtgt ttattgccgg gctgatgatt ggtcgtacac
     1981 cggaatatct gggtaaaaaa atcgacgtac gcgagatgaa actgactgca ctggcgattc
     2041 tggttactcc aacactggta ctgatgggcg cggcgttggc gatgatgacc gacgccggac
     2101 gtagcgccat gcttaaccct ggcccgcatg gttttagcga agtgctgtac gccgtgtcgt
     2161 ccgccgctaa caacaacggc agcgcctttg ccggattaag cgccaactct ccgttctgga
     2221 actgtttact ggcgttctgc atgtttgtcg gtcgcttcgg ggtgattatc ccggtgatgg
     2281 caattgccgg ttcgctggtg agtaaaaaga gccaacccgc cagctccggc acgctgccaa
     2341 cgcacggccc gctgtttgtt ggcctgttaa tcggcaccgt gttgctggtt ggcgcactga
     2401 cctttatccc tgccctggcg cttggtccgg tggcggaata tctctcctga tgatattgag
     2461 tgagcactga atatgagtcg taaacaactg gcgctattcg aaccaacact tgtcgttcag
     2521 gcgctgaaag aagcggtgaa aaaattaaac ccgcaggcgc aatggcgcaa tccggtgatg
     2581 tttatcgtct ggatcggcag tctgctgacc acctgtatta gcatcgcgat ggcaagcggt
     2641 gcgatgcctg gcaatgcgct gtttagcgcg gcaattagcg gctggctgtg ggtcaccgta
     2701 ctgttcgcta atttcgccga ggcgctggca gaaggccgca gtaaagcgca ggccaacagt
     2761 cttaaagggg tgaaaaaaac tgcctttgcc cgcaagctgc gtgagccgaa atatggcgct
     2821 gcggcggaca aagttcctgc cgatcaactg cgtaaaggtg acatcgtgct ggtagaagct
     2881 ggcgatatta tcccctgcga tggtgaagtc attgaaggcg gcgcatcggt cgatgaaagc
     2941 gccatcaccg gggaatcggc accggtgatc cgtgaatccg gcggcgattt tgcctccgtc
     3001 accggcggca cgcgtattct ttctgactgg ctggtgattg agtgtagcgt taaccccggt
     3061 gagacatttc tggatcggat gatcgcgatg gtggaaggcg cacagcgacg caaaacaccg
     3121 aacgagattg ccctgactat cctgctgatt gctctgacca tcgtcttttt actggcaacc
     3181 gccacgctgt ggccgttttc cgcgtggggc ggtaatgcag tgagtgtaac ggtactggtg
     3241 gcgctgctgg tctgtctgat cccaaccact attggcggcc tgttgtcagc gatcggcgtc
     3301 gccgggatga gtcggatgct gggcgcgaat gtgattgcca ccagcggacg tgcagttgaa
     3361 gcggcaggtg acgttgacgt tctgctactg gataaaaccg gcaccatcac actcggtaac
     3421 cgtcaggcgt cggagtttat ccctgcgcag ggcgtggatg aaaaaacgct ggctgacgcc
     3481 gcacaactgg cttcgctggc tgatgaaacg ccggaaggcc gcagtattgt gatcctcgcc
     3541 aagcaacgtt ttaacctgcg cgagcgcgat gtgcagtcgc tccatgccac ctttgtaccg
     3601 tttactgcgc aaagccggat gagcgggatc aacatcgaca accgcatgat ccgtaaaggt
     3661 tctgtcgatg ccattcgccg ccatgttgag gctaacggcg gtcacttccc tgccgatgtt
     3721 gatcaaaaag tcgatcaggt tgcgcgtcag ggggccacgc cgctggtggt ggtggaaggt
     3781 tcccgtgtgc tgggcgttat tgcgctgaaa gatatcgtca aaggcggtat taaagagcgc
     3841 ttcgcccagc tgcgcaaaat ggacattaaa acggtgatga ttaccggcga taaccgtctg
     3901 actgccgccg ccattgctgc ggaagcgggc gtcgatgatt ttctcgccga agcgacaccg
     3961 gaggccaagc tggcattgat tcgtcagtat caggcggaaa gccgtttggt ggcgatgacc
     4021 ggcgacggca ccaacgatgc tccggcgctg gcgcaagcag atgtcgcggt ggcgatgaac
     4081 tccggcaccc aggcggcgaa agaggcgggc aatatggtcg ctctcgactc taacccgacc
     4141 aagttgatcg aggtggtgca tattggcaaa cagatgctga tgacccgtgg ctcgctgacc
     4201 accttcagca ttgccaacga tgtggcgaaa tacttcgcca ttattccggc ggcgttcgcg
     4261 gcaacgtatc cgcagttaaa tgcgctgaac atcatgcgcc tgcattcgcc cgactccgcc
     4321 attctcagtg cagtcatttt caacgccttg attatcgtct ttttgattcc tctggcgtta
     4381 aaaggcgtga gttataaacc gcttaccgct tctgccatgt tgcgccgtaa cttatggatt
     4441 tacggtctgg gtgggctgct ggtgccgttt attggtatca aagtcattga tttactgctg
     4501 accgtttgcg gtctggtgtg aggtttacca tgcgtggctt acgtccggca ttatcgacat
     4561 ttatctttct gttattgatt actggcggcg tttacccgct gctgaccacc gtgctggggc
     4621 aatggtggtt tccctggcag gccaacggtt cgttgattcg tgaaggtgat acggtgcggg
     4681 gttcggcatt aatcgggcag aattttacca gcaacggcag aaatgcccta taatccacag
     4741 gcttctggcg ggagcaatct ggcggtcagt aaccctgagc tggataaaca aatagccgca
     4801 cgcgttgctg cattacgggc cgctaacccg gatgccagta cgaacgttcc ggttgaactg
     4861 gtgacggcat cggcaagcgg gctggacaat aatatcaccc cgcaagcggc ggcctggcag
     4921 atcccacgca tcgcgaaagc gcgtaatctc agcgttgaac agctcacgca gctgatcgca
     4981 aaatacagcc aacaaccgct ggtgaaatat atcggccagc cggtcgtcaa cattgtcgaa
     5041 ctcaatctgg cgctggataa gcttgatgaa taacgaaccc ttacgtcccg accccgatcg
     5101 tctgctggaa caaactgccg cgccgcatcg ggggaagctg aaagttttct tcggtgcctg
     5161 tgcaggcgtc gggaagacct gggcgatgct ggcagaagcc cagcgactgc gggcgcaagg
     5221 gctggatatt gtggttggcg tggtagaaac ccacgggcga aaagataccg ccgcaatgct
     5281 ggaagggctg gctgttctgc cgccaaaacg cctggcgtac cgtgggcggc acatctgcga
     5341 gtttgacctc gatgccgccc tcgcccgccg tccggcgctg atcttaatgg acgaactggc
     5401 gcacagtaat gcgctaggtt ctcgtcaccc taaacgctgg caggacatcg aagagctgca
     5461 ggaagcaggc attgatgttt tcactaccgt caacgttcag catctggaaa gtctgaatga
     5521 tgtggtcagc ggcgtcaccg gaattcaggt acgggaaacc gtgcccgatc cttttttcga
     5581 tgccgccgac gacgtggttc tggtggactt gcccccggac gatctgcgcc agcggctgaa
     5641 agaaggcaaa gcctatattg ccgggcaggc ggagcgcgcc attgaacatt ttttccgcaa
     5701 aggcaatctg atcgccctgc gcgaactggc actgcgccgt actgccgatc gcgttgatga
     5761 gcaaatgcgc gcctggcggg ggcatcctgg cgaagagaaa gtctggcaca cgcgcgacgc
     5821 gatcctttta tgcatcggcc ataacaccgg tagtgagaag ctggtccgcg cggcggcgcg
     5881 gctggcgtca cggctgggta gagtctggca cgcggtgtat gttgaaaccc ctgccctgca
     5941 ccgcttaccg gaaaaaaaac gtcgggcaat tctcagcgcc ttacgtctgg cgcaggagct
     6001 gggcgcggag acggcaacac tttctgatcc agcggaagaa aaagcagtag tgcgttatgc
     6061 ccgtgaacat aatctcggca agattattct cggtcgcccg gcctcgcgcc gctggtggcg
     6121 tcgggaaacg tttgctgacc gactggcgcg catcgccccc gatctcgatc aggtgctggt
     6181 cgcgcttgat gaaccacccg cccgcacgat taacaacgcg ccggatagcc gctcttttaa
     6241 agacaagtgg cgggtacaga ttcagggatg cgtggttgcc gccgcgttat gcgccgttat
     6301 cactttaatt gccatgcagt ggctgatggc gtttgatgcc gccaacctgg tgatgctgta
     6361 tctgcttggc gtggtggtgg tggcgctatt ttatggacgc tggccttcgg tggttgctac
     6421 cgtcattaat gtggtgagtt tcgatctctt ttttatcgcc ccacgcggca cgctcgccgt
     6481 ctctgatgtg caatatctgc tgaccttcgc agtgatgtta accgtcgggc tggtgatcgg
     6541 gaaccttact gctggcgtgc gttatcaggc gcgggtagcc cgttaccgcg agcaacgcac
     6601 acggcactta tatgaaatgt cgaaagctct ggcggtgggc cgcagtccgc aggacatcgc
     6661 cgccaccatc gaacaattta ttgcctccac gtttcatgcc cgcagtcagg tgttgttgcc
     6721 cgatgacaac ggtaaattgc agccgttaac acatccgcaa ggaatgacgc catgggacga
     6781 taccatcgcg cagtggagtt ttgataaagg cctgcctgcg ggcgcgggca ccgacacgtt
     6841 acccggtgta ccgtaccaga ttttgccgct aaaaagcggc gagaaaacct acgggctggt
     6901 ggtggtggag ccggggaatc tgcgccagtt gatgatcccg gaacagcagc gcctgctgga
     6961 gacgtttacg ctgttagtcg ccaatgccct tgagcggctg acgctaaccg ccagcgaaga
     7021 acaggcgcgg atggcaagcg aacgtgaaca gatccgcaac gccctgctgg cagcgctttc
     7081 gcatgattta cgcacgccgc tcacggtgct gttcggtcag gcagaaatct taacgctcga
     7141 tctggcaagc gaaggatcgc cccacgcccg ccaggccagc gagattcgtc agcatgtgct
     7201 gaacactacc cgactggtga ataatctact ggatatggcg cgaattcagt ccggcggctt
     7261 taatttgaag aaagagtggt taacgctgga agaagtggtc ggtagcgcgc tgcaaatgct
     7321 ggaaccgggt ttatcgtcgc ccatcaatct ttctctgcca gaaccgctga ccttaatcca
     7381 cgttgacggg ccactctttg aacgggtgct gattaatctg ctggagaacg cggtgaaata
     7441 tgcgggtgcg caggccgaaa ttggtatcga tgcccacgtt gagggcgaaa atctacaact
     7501 ggatgtctgg gataacggcc ccggtcttcc gccaggccag gagcagacga tatttgataa
     7561 gtttgctcgc gggaataaag agtcggcagt accgggggta gggcttggac tggcaatttg
     7621 tcgggcgata gtggatgtac acgggggcac tattaccgcg ttcaaccgac cggaaggtgg
     7681 tgcctgtttt cgtgttacac ttccccagca aactgcccct gaacttgaag aatttcatga
     7741 ggatatgtga caaacgttct gattgttgaa gatgaacagg ctattcgtcg ctttctgcgc
     7801 acggcgctgg agggcgacgg gatgcgcgtc tatgaggccg aaacgctgca acgcggcttg
     7861 ctggaagcgg ctacccgtaa gccagatttg attattctcg atctcggcct gcccgatggt
     7921 gatgggattg agtttatccg cgacctgcgc cagtggagcg cggtgccggt gattgtgctt
     7981 tccgcacgca gcgaagagag cgacaaaatc gccgcgctgg atgccggagc ggatgattat
     8041 ctgagtaagc cgtttggcat tggcgaattg caggcccgtc tgcgcgtcgc tttacgccgc
     8101 cactccgcca ccgccgcgcc cgatccgctg gtgaaatatt ccgatgttac cgtcgattta
     8161 gccgcccgcg tgattcaccg gggtgaggaa gaggtgcatc tcacaccaat tgagttccac
     8221 ctgctggcgg tgctgctcaa caatgccgga aaagtactca cccagcgcca gctccttaac
     8281 caggtgtggg ggccaaacgc ggtcgaacac agtcactatt tgcgtattta tatgggacat
     8341 ctgcgacaaa aactggaaca ggatcccgcc cgcccacgcc atttcattac tgaaaccagt
     8401 attggctatc ggtttatgct ttgaatatta attttaatac agcctgcctt ttattaatta
     8461 aagccgtaat aataaatacg gctttttatc ttaaacaaca cacaaaaata acaattcaat
     8521 attttatatt actgagtaaa aagctcatca ttaaataaat taagattgaa cattttttat
     8581 tgatcacctt cacagttcaa ccgtatttcc tggatagaat atcttcacct tcattcacat
     8641 caggaaaggt aaattaaatg gaaaataaca gccgcactat gccccatata aggcggacaa
     8701 ctcatattat gaagtttgct catcgcaata gcttcgactt tcacttcttc aatgcccgtt
     8761 agtc
//
LOCUS       DADMHC010000166         8729 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.169, whole genome shotgun sequence.
ACCESSION   DADMHC010000166 DADMHC010000000
VERSION     DADMHC010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8729)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8729)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8729
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.169"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            56..1008
                     /locus_tag="JNZ57_003203"
                     /pseudo
     CDS             56..1008
                     /locus_tag="JNZ57_003203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415162.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
     gene            1217..2182
                     /gene="lipA"
                     /locus_tag="JNZ57_003204"
     CDS             1217..2182
                     /gene="lipA"
                     /locus_tag="JNZ57_003204"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HAY8829312.1"
                     /translation="MSKPIVMERGVKYRDADKMALIPVKNVAIEREALLRKPEWMKIK
                     LPADSTRIQGIKAAMRKNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCD
                     VAHGRPVAPDANEPVKLAQTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIREKS
                     PQIKIETLVPDFRGRMDRALDILTATPPDVFNHNLENVPRIYRQVRPGADYNWSLKLL
                     ERFKEAHPEIPTKSGLMVGLGETNEEIIEVMRDLRRHGVTMLTLGQYLQPSRHHLPVQ
                     RYVSPDEFDEMKAEALAMGFTHAACGPFVRSSYHADLQAKGMEVK"
     gene            complement(2283..2486)
                     /gene="tatE"
                     /locus_tag="JNZ57_003205"
     CDS             complement(2283..2486)
                     /gene="tatE"
                     /locus_tag="JNZ57_003205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatE"
                     /protein_id="HAY8829313.1"
                     /translation="MGEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMN
                     DDDAAAKKGADVDLQAEKLSHKE"
     gene            complement(2615..3403)
                     /locus_tag="JNZ57_003206"
     CDS             complement(2615..3403)
                     /locus_tag="JNZ57_003206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deaminated glutathione amidase"
                     /protein_id="HAY8829314.1"
                     /translation="MLVAAGQFAVTSVWEKNAEICASLMAQAAENDVSLFVLPEALLA
                     RDDHDADLSVKSAQLLEGEFLGRLRRESKRNMMTTILTIHVPSTPGRAWNMLVALQAG
                     NIVARYAKLYLYDAFAIQESRRVDAGNEIAPLLEVEGMKVGLMTCYDLRFPELALAQA
                     LQGAEILVLPAAWVRGPLKEHHWSTLLAARALDTTCYMVAAGECGNKNIGQSRIIDPF
                     GVTIAAASEMPALIMAEVTPERVRQVRAQLPVLNNRRFAPPQLL"
     gene            3496..3879
                     /gene="crcB"
                     /locus_tag="JNZ57_003207"
     CDS             3496..3879
                     /gene="crcB"
                     /locus_tag="JNZ57_003207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HAY8829315.1"
                     /translation="MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLTANLIG
                     AFIIGMGFAWFSRMTNIDPVWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLN
                     VFVNLLGSFAMTALAFWLFSASTAH"
     gene            complement(3934..4143)
                     /gene="cspE"
                     /locus_tag="JNZ57_003208"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
     CDS             complement(3934..4143)
                     /gene="cspE"
                     /locus_tag="JNZ57_003208"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002436076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator/RNA stability
                     regulator CspE"
                     /protein_id="HAY8829316.1"
                     /translation="MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTL
                     AEGQRVEFEITNGAKGPSAANVIAL"
     gene            complement(4318..4878)
                     /locus_tag="JNZ57_003209"
                     /pseudo
     CDS             complement(4318..4878)
                     /locus_tag="JNZ57_003209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415155.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid:lipid A palmitoyltransferase"
     gene            5468..6853
                     /gene="dcuC"
                     /locus_tag="JNZ57_003210"
     CDS             5468..6853
                     /gene="dcuC"
                     /locus_tag="JNZ57_003210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuC"
                     /protein_id="HAY8829317.1"
                     /translation="MLTFIELLIGVVVIVGVARYIIKGYSATGVLFVGGLLLLIISAI
                     MGHKVLPSSQASTGYSATDIVEYVKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMV
                     VKLASKPLQYINSPYLLMIAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRG
                     AAAAICASPAAIILAPTSGDVVLAAQASEMSLIDFAFKTTLPISIAAIIGMAIAHFFW
                     QRYLDKKEHISHEMLDVSEITTTAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVI
                     CMLIASILEFLRSFNTQKVFSGLEVAYRGMADAFANVVMLLVAAGVFAQGLSTIGFIQ
                     SLISIATSFGSASIILMLVLAILTMLAAVTTGSGNAPFYAFVEMIPKLAHSSGINPAY
                     LTIPMLQASNLGRTLSPVSGVVVAVAGMAKISPFEVVKRTSVPVLVGLVIVIVATELM
                     VPGTAAAVTGK"
     gene            complement(6894..7574)
                     /gene="dpiA"
                     /locus_tag="JNZ57_003211"
                     /gene_synonym="citB"
     CDS             complement(6894..7574)
                     /gene="dpiA"
                     /locus_tag="JNZ57_003211"
                     /gene_synonym="citB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component response regulator DpiA"
                     /protein_id="HAY8829318.1"
                     /translation="MTAPLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARM
                     MIERFKPGLILLDNYLPDGRGINLLHELVQAHYPGDVVFTTAASDMETVSEAVRCGVF
                     DYLIKPIAYERLGQTLTRFRQRKHMLESIDSASQKQIDEMFNAYARGEPKDELPTGID
                     PLTLNAVRKLFKEPGVQHTAETVAQALTISRTTARRYLEYCASRHLIIAEIVHGKVGR
                     PQRIYHSG"
     gene            complement(7543..>8729)
                     /gene="dpiB"
                     /locus_tag="JNZ57_003212"
     CDS             complement(7543..>8729)
                     /gene="dpiB"
                     /locus_tag="JNZ57_003212"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sensor histidine kinase DpiB"
                     /protein_id="HAY8829319.1"
                     /translation="VIGVVSIGYLVSKIDSWRAEFLLPMAGVFVVLLGILMLLSWFLA
                     AHIRRQMMGMEPKQIARVVRQQEALFSSVYEGLIAVDPHGYITAINRNARKMLGLSSP
                     GRQWLGKPIAEVVRPADFFTEQIDEKRQDVVANFNGLSVIANREAIRSGDDLLGAIIS
                     FRSKDEISTLNAQLTQIKQYVESLRTLRHEHLNWMSTLNGLLQMKEYDRVLAMVQGES
                     QAQQQLIDSLREAFADRQVAGLLFGKVQRARELGLKMIIVPGSQLSQLPPGLDSTEFA
                     AIVGNLLDNAFEASLRSDEGNKIVELFLSDEGDDVVIEVADQGCGVPESLRDKIFEQG
                     VSTRADEPGEHGIGLYLIASYVTRCGGVITLEDNDPCGTLFSIYIPKVKPNDSSINPI
                     DR"
BASE COUNT         2237 a         2189 c         1966 g         2337 t
ORIGIN      
        1 gattattgta attttttaaa tattattttt ccatgaataa aattggagta agtgcgtgga
       61 tagtaataat caaattgaac cctgtttaag cagaaagtcg tcagaaggta aaccacaaat
      121 atttacaacc ttacgaaata ttgctcttaa ccttctgact atttttgaag ctgtatatgt
      181 acataaaggg atcgttaatg cagcgaaagt gcttaatctg cccccctcgg caatcagtca
      241 gtctattcag aaactgcgcg ttatattccc tgacccattg tttattcgca aaggccaggg
      301 tgtcactcct accgcatttg cgatgcatct acatgagtat atcagtcagg gccttgagtc
      361 cattcttggc cgctggatat cgaaggaagc tatgataagc aacgaacgat aactattgcg
      421 accactccct cggtcggagc cctggtcctt cctgtcatct atcgggcgat taaaactcac
      481 tatccgcagc ttttactgcg caacccgccc atcagcgacg cggaaaacca actcagtcag
      541 tttcaaaccg atctcatcat cgataacatg ttttgcacca atcgtacggt gcaacatcat
      601 gttctgttca ccgacaatat ggtgttaatt tgccgcgagg gaaatccact actctcttta
      661 gaagatgaca gagagactat cgacaacgct gcgcatgtac ttctgttacc ggaagagcaa
      721 aatttcagcg gtctgcggca gagagttcaa gaaatgtttc cggaccggca aatcaatttc
      781 accagctaca acattttgac aatcgctgca ctggttgcca acagtgacat gttagcgatt
      841 attcccagcc gtttttataa cctgtttagc cgctgctggc cgctggaaaa actgcctttt
      901 ccgtccttaa ataaggagca aatagatttc tctatccact acaacaaatt cagcctgcgt
      961 gatcccatcc tgcacggagt aatagatgtt atccgtaatg cattttgaaa aagtattgtt
     1021 acagccagat cacagcgcag aacgataaaa tggcacaatc caacaacaat tttacatttt
     1081 cgcgaccgct ttggctgctt tcaggtccgt ttcaatgata tactgccagt cgttaattca
     1141 aaaatagttg ataattacaa caatctattg aattgaaacg ctttccttcg taattcgcaa
     1201 ctggaacacg cacgctatga gtaaacccat tgtgatggaa cgcggtgtta aataccgcga
     1261 tgccgataag atggccctta tcccggttaa aaacgtggca atagagcgcg aagccctgct
     1321 gcgcaagccg gaatggatga aaatcaagct tccagcggac tctacacgta tccagggcat
     1381 caaagccgca atgcgcaaaa atggcctgca ttctgtctgc gaggaagcct cctgccctaa
     1441 cctggcggaa tgcttcaacc acggcacagc aacgtttatg atcctcggcg ctatttgtac
     1501 ccgccgttgt ccgttctgtg atgttgccca cggtcgcccg gtagctcctg atgccaatga
     1561 accagtgaaa ctggcgcaga ccattgccga tatggcgctg cgttatgtgg ttatcacctc
     1621 cgttgaccgt gatgacctgc gcgatggcgg tgcccagcac tttgcggatt gcattactgc
     1681 cattcgggaa aaaagcccgc aaatcaaaat tgaaactctg gtgccggatt tccgtggtcg
     1741 tatggatcgt gctctggata ttctgactgc aacgccacca gatgtgttca accataacct
     1801 ggaaaacgta ccgcgtattt accgtcaggt acggcctggt gcagattaca actggtcgct
     1861 gaagctgctg gaacgcttta aagaagcgca tccggaaatc ccgaccaagt ctggtctgat
     1921 ggtgggactg ggtgaaacca atgaagaaat tattgaggta atgcgcgacc tgcgccgtca
     1981 tggtgtgacg atgttaacgc tggggcaata tttgcagcca agccgccatc acctgccggt
     2041 tcaacgttac gttagcccgg atgagttcga cgaaatgaaa gccgaagcgc tggcgatggg
     2101 ctttacccat gctgcatgcg gtccgtttgt ccgctcttct taccacgccg atttgcaggc
     2161 gaaagggatg gaagttaagt aatcctgtaa taattactta catctgtctg ataaaaaacc
     2221 cactttttga agcgggtttt ttgtatcgaa caagatattg agggagcgtc ctgctcgcca
     2281 cgtcactctt tatgagagag cttttcagcc tgaagatcaa cgtctgcgcc ttttttcgcc
     2341 gcagcatcat catcattcat cgccttcttg aaccctttaa tggccgctcc aaggtctcca
     2401 cccagcgtac gtaacttctt agtcccaaac agcagaacga ccagcgccgc aactactagc
     2461 agtttggtaa tactaatctc acccatagat accttcttga catataaccg gcaacagaac
     2521 gcgccttaaa aaccagagaa tattaacggt cattcgacgc gcgcacacaa tagcaatctg
     2581 taacaaggtg aatcaagcgc cgagtaaaaa aacatcataa taattgcggc ggcgcaaagc
     2641 gacggttgtt taagacgggc agttgcgcgc gcacctgacg cacacgttcg ggcgtcactt
     2701 ccgccataat gagtgcaggc atttctgacg ctgccgcaat ggtgacgcca aagggatcta
     2761 taatccggct ttgcccgata tttttgttcc cgcactcgcc cgccgccacc atataacagg
     2821 tggtatccag cgcacgagcg gcaagcaacg ttgaccagtg atgctctttg agcggcccgc
     2881 gaacccaggc ggcaggaagt accaggattt cagctccctg taatgcctgt gccagcgcca
     2941 gctctggaaa gcgtaagtca taacaggtca tcagaccgac cttcatccct tccacctcca
     3001 gtaacggagc gatttcatta ccagcatcaa cacggcgtga ttcctgaatg gcaaatgcat
     3061 catagagata cagtttggca taacgggcga cgatgtttcc tgcctgaagt gccaccagca
     3121 tattccatgc gcgccccggc gttgaaggaa catgaatcgt cagaattgtc gtcatcatgt
     3181 tacgtttact ttctcgccgt aaacgtccga ggaattcgcc ttccagcagc tgtgctgatt
     3241 taaccgatag atctgcatca tgatcatcgc gtgccagcaa tgcttccggc aggacaaaca
     3301 gcgatacgtc gttttccgcc gcctgcgcca tcaacgaggc acaaatctca gcgttctttt
     3361 cccacacaga tgtaacagca aactgtcctg cagcaaccag cattgtcacc tcctgtcaga
     3421 gtcgtaaaat tcgccaacga cgattattcg gcgttacact tatcactcat acaaatcaaa
     3481 tagcaggatt ttgcagtgtt acaacttctt ttagcagttt ttattggcgg tggtacggga
     3541 agcgtggcga gatggctgtt aagtatgcga tttaacccac tgcatcaggc gattccgttg
     3601 gggacgctga cagcaaacct gattggggca ttcatcatag gaatgggatt cgcatggttt
     3661 agcaggatga cgaacattga tccagtgtgg aaagtattaa tcaccaccgg attttgtggc
     3721 ggtctaacaa ccttctcaac attttcggca gaagtggtgt ttttgttaca agagggtcgc
     3781 tttggctggg cattactgaa cgttttcgtc aaccttctgg ggtcttttgc catgacagca
     3841 ctggctttct ggctgttttc ggcctcaacc gcacactaaa gaccaaaaaa aaaaccgctg
     3901 attaagcggg ttttgaattc ttgctgacgt atcttacaga gcgattacgt ttgcagcaga
     3961 agggcctttg gcaccgttag tgatttcgaa ctctacgcgc tgaccttcag caagagtttt
     4021 aaaaccatta gtctggattg cagagaagtg tacgaacacg tctttgctgc cgtcttccgg
     4081 agtaatgaaa ccgaatcctt tggactcatt aaaccactta acgttacctt taatcttaga
     4141 catcaaaatt acctttacat gaaaaataga cacaaatgct gtgtcggtta ccagtacacc
     4201 aattgtggta cgctttgtcc agtgcaactt tactaaaaag tgataaaagt cgcgttattt
     4261 ttgatgttac ttattttagc tattgatttt aaagaagtta ctaaaacttc atttgtctca
     4321 aaactgaaag cgcatccagg caaagtacac attgccattg ttgtaggtac ccggaatgta
     4381 ggtcatctga aaagtcactg ggccataacc cacggaggcc aatggcagta gaaccgggag
     4441 agggatgtaa ttccagttat cgcgtgccgt tacgccagcg gtgaatccca gacctaaatg
     4501 aaaattttca tccgccagcg gtcgccaggt actttcccat ccgtatccgg caatcggttc
     4561 ccatttgttc cacgagtcct taaatgccat ggcatacagg ccatgccagt ttcctttttc
     4621 atcccaacgc gacaggccaa aaccgccacc ccacggtcgc tcgttatagc gatcggtttt
     4681 ttctttgtcg taagcgaaac gtgcatgcta ggtgatggca ggaatatata aatcataatg
     4741 ttcaggctgt tgccaggttg gtgcaatatt ttctctaaac gttgtcatcc actcatctgc
     4801 gttagcaaaa actttaccaa cgctgattaa ctgaataaaa acaaaggaaa agatagcgac
     4861 atatttactc acgttcattt gtgaccataa aacatttatc aaaaatctac tactagcata
     4921 gcaaagctac aattaacata accttaatag acccaacata aagaataatc tgaatagctg
     4981 ctctatttat ttccgcttgt tcaagttaaa tatttccgcg catcgattaa agatgatgcg
     5041 tcgttttctg cgatgggaat agtcaaaaaa gaaaaaccaa gtcttttttg atgataaaat
     5101 aaaatcaagg aaaaattatt ttatttttta acgagataca acaatcatct taacgaagta
     5161 tataatatat atcgtcaacc catgctcata ttagattatt tttttgagca cacagccgca
     5221 gctaacacca ttgcaattaa caaatttgca tcaatccacc atcaattatc acacattatt
     5281 atgtgataat tgccaaccgc taaatatgcg ttttgttatc tatgtataaa aacagcaact
     5341 tcaatgtctt aatggcagtt tttcttgatt ttaatcagca ttcatcgcca atttattggg
     5401 catatttttt ccttaagctt taggaatttt ttattattta ctttggggcc tggagacagg
     5461 aaaaattatg ctgacattca ttgaactcct tattggggtt gtggttattg tgggtgtagc
     5521 tcgctacatc attaaagggt attccgccac tggtgtgtta tttgtcggtg gcctgttatt
     5581 gctgattatc agtgccatta tggggcacaa agtgttaccg tccagccagg cttcaacagg
     5641 ctacagcgcc acggatatcg ttgaatacgt taaaatatta ctaatgagcc gcggcggcga
     5701 cctcggcatg atgattatga tgctgtgtgg atttgccgct tacatgaccc atatcggcgc
     5761 gaatgatatg gtggtcaagc tggcgtcaaa accattgcag tatattaact ccccttacct
     5821 gctgatgatt gccgcctatt ttgtcgcctg tctgatgtct ctagccgtct cttccgcaac
     5881 cggtctgggt gttttgctga tggcaaccct atttccggtg atggtaaacg ttggtatcag
     5941 tcgtggcgca gctgctgcca tttgtgcctc cccggcggcg attattctcg caccgacttc
     6001 aggggatgtg gtgctggcgg cgcaagcttc cgaaatgtcg ctgattgact tcgccttcaa
     6061 aacgacgctg cctatctcaa ttgctgcaat tatcggcatg gcgatcgccc acttcttctg
     6121 gcaacgttat ctggataaaa aagagcacat ctctcatgaa atgttagatg tcagtgaaat
     6181 caccaccact gctcctgcgt tttatgccat tttgccgttc acgccgatca tcggtgtact
     6241 gatttttgac ggtaaatggg gtccgcaatt acacatcatc actattctgg tgatttgtat
     6301 gctgattgcc tccattctgg agttcctccg cagctttaat acccagaaag ttttctctgg
     6361 tctggaagtg gcttatcgcg ggatggcaga tgcgtttgct aacgtggtga tgctgctggt
     6421 tgccgctggg gtattcgctc aggggcttag caccatcggc tttattcaaa gtctgatttc
     6481 tatcgctacc tcgtttggtt cggcgagtat catcctgatg ctggtattgg cgattctgac
     6541 aatgctggcg gcagtcacga ccggttcagg caatgcgccg ttttatgcgt ttgttgagat
     6601 gatcccgaaa ctggcgcact cttccggcat taacccggcg tatttgacta tcccgatgct
     6661 gcaggcgtca aaccttggcc gtaccctttc gcccgtttct ggcgtagtcg ttgcggttgc
     6721 cgggatggcg aagatctcgc cgtttgaagt cgtaaaacgc acctcggtac cggtgcttgt
     6781 tggtttggtg attgttatcg ttgctacaga gctgatggtg ccaggaacgg cagcagcggt
     6841 cacaggcaag taaatagtaa tgccggaggc aagtttcctc cggctttatc atgtcaccca
     6901 ctgtggtata tgcgttgtgg tctgccaact ttgccgtgaa caatttcagc aataatcaga
     6961 tggcggctgg cgcaatattc aagataacgt ctggcagtgg tgcggctgat ggtcagtgcc
     7021 tgcgccaccg tttctgccgt atgttgcaca ccaggctctt taaacagttt tcgcaccgcg
     7081 tttagcgtca agggatcaat gccggtcggc agttcgtctt taggttcacc gcgagcatag
     7141 gcattaaaca tctcatcaat ttgcttctgg ctggcgctat caatactttc cagcatatgt
     7201 ttacgctggc ggaaacgggt tagcgtttgc cccagccgtt cataggcaat gggcttaatg
     7261 agataatcaa atacaccaca acgtacggct tcagacaccg tttccatatc gctggctgca
     7321 gtggtaaaca ccacgtcgcc gggataatgc gcctgcacca gttcatgcaa taaattaatc
     7381 cctctgccgt caggaagata gttatcgagc aagattagcc ccggcttaaa acgctcgatc
     7441 atcattcggg cctgcgccag gtttcccgcc agtaatatct gactgaatcc gggaatgtga
     7501 cgaatatatt ccgcatgcat ctctgccagc ggcgtttcgt cctcaacgat caatagggtt
     7561 aatggagctg tcattaggtt tcactttcgg aatatagatt gaaaataagg taccgcaggg
     7621 atcattatct tcgagagtga taacaccacc gcagcgcgtt acgtagctgg caatcaagta
     7681 caacccaatg ccatgttcac cgggctcgtc agcacgcgta ctgaccccct gctcaaatat
     7741 tttgtctcgt agagactctg gaacgccgca gccctgatcg gcgacttcaa tcaccacatc
     7801 atcgccttca tcgctgagga ataattcaac gatcttgttt ccttcatcgc tacgcaggct
     7861 ggcttcgaag gcgttatcaa gtaaattgcc cacaatggct gcaaactcgg tgctatccag
     7921 tcctggcggc agttgcgaaa gctggctacc ggggacaatg atcattttta gccccagttc
     7981 ccgggcgcgc tgcactttac caaaaagcag ccccgccacc tggcgatcgg caaacgcctc
     8041 gcgcaggctg tcaataagct gttgctgggc ctgagactcc ccctgcacca tcgccagcac
     8101 gcgatcatac tctttcatct gcaacagacc attgagcgtc gacatccaat tgagatgctc
     8161 gtgtcgcaat gtacgaaggc tctcaacgta ttgttttatt tgcgtcagtt gcgcattgag
     8221 ggtggaaatt tcgtctttac tgcgaaagct gataatggcc cccagcaaat catcacctga
     8281 acgaatagct tcccgattgg caataacgct cagaccgtta aagttagcca ccacatcctg
     8341 acgtttttca tcaatctgtt cggtaaagaa atcggcgggc ctgaccactt cagcaatggg
     8401 tttacccaac cattgccgtc cgggggaact cagccccagc atctttcttg cgttacgatt
     8461 gatggcggta atgtaaccgt gcggatccac cgcaatcagc ccttcataaa ccgaactaaa
     8521 cagcgcctct tgctgacgga ccacgcgtgc gatttgcttt ggctccatgc ccatcatctg
     8581 ccgacggata tgcgcggcca ggaaccacga cagcaacatc agaatcccta acagcacgac
     8641 aaacacacct gccatcggta ataaaaactc agcccgccag ctatcgattt tactcaccag
     8701 gtagccaatc gacaccacgc cgatgactt
//
LOCUS       DADMHC010000167         8718 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.170, whole genome shotgun sequence.
ACCESSION   DADMHC010000167 DADMHC010000000
VERSION     DADMHC010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8718)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8718)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8718
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.170"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            243..1154
                     /gene="ttdA"
                     /locus_tag="JNZ57_003213"
     CDS             243..1154
                     /gene="ttdA"
                     /locus_tag="JNZ57_003213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L(+)-tartrate dehydratase subunit alpha"
                     /protein_id="HAY8829320.1"
                     /translation="MMSESNKQQAVNKLTEIVANFTAMISTRMPDDVVDKLKQLKDAE
                     TSSMGKIIYHTMFDNMQKAIDLNRPACQDTGEIMFFVKVGSRFPLLGELQSILKQAVE
                     EATVKAPLRHNAVEIFDEVNTGKNTGSGVPWVTWDIIPDNDDAEIEVYMAGGGCTLPG
                     RSKVLMPSEGYEGVVKFVFENISTLAVNACPPVLVGVGIATSVETAAVLSRKAILRPI
                     GSRHPNPKAAELELRQEEGLNRLGIGPQGLTGNSSVMGVHIESAARHPSTIGVAVSTG
                     CWAHRRGTLLVHADLTFENLSHTRSAL"
     gene            1151..1739
                     /gene="ttdB"
                     /locus_tag="JNZ57_003214"
                     /pseudo
     CDS             1151..1739
                     /gene="ttdB"
                     /locus_tag="JNZ57_003214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311972.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L(+)-tartrate dehydratase subunit beta"
     gene            1788..3251
                     /locus_tag="JNZ57_003215"
     CDS             1788..3251
                     /locus_tag="JNZ57_003215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-tartrate/succinate antiporter"
                     /protein_id="HAY8829321.1"
                     /translation="MKPSTEWWRYLAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVI
                     VGLILEPVPGAVVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSV
                     IWLIFAAFMFGTGYEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSA
                     RGAGIIYPIIRNLPPLYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLL
                     IGLMKSASHATLSWGDWFLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETEL
                     QAMGPLCSREKRMLGLMVGALVLWIFGGDYIDAAMVGYSVVALMLLLRIISWDDIVSN
                     KAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLSGYSPTMVMVALIVVFYLLRY
                     FFASATAYTSALAPMMIAAALAMPEIPLPVFCLMVGAAIGLGSILTPYATGPSPIYYG
                     SGYLPTADYWRLGAIFGLIFLVLLVITGLLWMPVVLL"
     gene            complement(3294..4307)
                     /gene="tsaD"
                     /locus_tag="JNZ57_003216"
     CDS             complement(3294..4307)
                     /gene="tsaD"
                     /locus_tag="JNZ57_003216"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001264383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HAY8829322.1"
                     /translation="MRVLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVP
                     ELASRDHVRKTVPLIQAALKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAW
                     NVPAIPVHHMEGHLLAPMLEDNPPEFPFVALLVSGGHTQLISVTGIGQYELLGESIDD
                     AAGEAFDKTAKLLGLDYPGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFA
                     ANTIRDNGTDDQTRADIARAFEDAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLR
                     AKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGATADLGVSVRPRWPLAEL
                     PAA"
     gene            4544..4759
                     /gene="rpsU"
                     /locus_tag="JNZ57_003217"
     CDS             4544..4759
                     /gene="rpsU"
                     /locus_tag="JNZ57_003217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HAY8829323.1"
                     /translation="MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTE
                     RKRAKASAVKRHAKKLARENARRTRLY"
     gene            4870..6615
                     /gene="dnaG"
                     /locus_tag="JNZ57_003218"
     CDS             4870..6615
                     /gene="dnaG"
                     /locus_tag="JNZ57_003218"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HAY8829324.1"
                     /translation="MAGRIPRVFINDLLARTDIVDLIDTRVKLKKQGKNFHACCPFHN
                     EKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG
                     SGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGF
                     APPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGF
                     GGRVLGDDTPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQY
                     GINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQ
                     LRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLS
                     TLALPLISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTT
                     MRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYR
                     GTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNE
                     ERLELWTLNQELAKK"
     gene            6810..8651
                     /gene="rpoD"
                     /locus_tag="JNZ57_003219"
     CDS             6810..8651
                     /gene="rpoD"
                     /locus_tag="JNZ57_003219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HAY8829325.1"
                     /translation="MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDI
                     IQMINDMGIQVMEEAPDADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYM
                     REMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSD
                     LITGFVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDDDSTDDDNSIDPELAR
                     EKFAELRAQYVVTRDTIKAKGRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVM
                     MDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVS
                     EEVHRALQKLQQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAK
                     KYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTI
                     RIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISME
                     TPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTAREAKVLRMRFGID
                     MNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD"
BASE COUNT         2101 a         2329 c         2330 g         1958 t
ORIGIN      
        1 ctgcaagtct ttggctaaag gccagctatt cagcatcgtt aattatccgc agttgtgata
       61 agcgcagtgt atttcgcaaa acattgccat tccctgctct ggcgcaatat tcattcttat
      121 tttcgcgttg attcacgaac tgttaattac atattcacgg tggcaaaaaa tataaaacca
      181 catttttagt ggtagtttgt ggcggtgaat ttttccagac aaatacaaaa actggagttg
      241 ccatgatgag cgaaagtaat aagcaacagg cagtgaataa gttgacagag attgtcgcta
      301 actttaccgc catgatttct acccgaatgc ctgatgacgt ggtggataaa ctaaaacagc
      361 taaaggatgc cgaaacgtcg tcgatgggga aaattatcta ccatacgatg ttcgacaaca
      421 tgcaaaaagc gattgacctg aatcgtcctg cctgtcagga caccggggag attatgttct
      481 tcgttaaagt cggttcccgc ttcccactgc ttggcgagct gcaaagcata ctcaaacaag
      541 ccgtggaaga ggcaaccgtc aaagcgccac tacgtcacaa tgcggtagaa atttttgacg
      601 aagtaaacac cggcaaaaat accggtagcg gcgtaccgtg ggtcacctgg gacatcatcc
      661 ccgacaatga cgatgcggaa atcgaagttt acatggcagg tggcggctgc acgctacctg
      721 gccgctcgaa agtgttaatg ccgtcagaag gctacgaagg cgtggtgaaa ttcgtcttcg
      781 aaaatatctc caccctcgcc gtaaacgcct gtccaccggt actggtgggc gtgggcatcg
      841 ccacctcggt ggaaaccgcc gccgtactct cgcgtaaagc cattttgcgc ccgattggca
      901 gccgccatcc caatccaaaa gcggcagaac tggagctacg ccaggaagaa ggactcaacc
      961 gtctggggat tggtccacaa gggctgactg gcaacagttc agtgatgggc gtacatatcg
     1021 aatctgccgc ccgccatccg tcaaccatcg gcgttgctgt ctctaccggc tgctgggcgc
     1081 atcgtcgcgg cacactgctg gttcatgccg atctcacctt tgaaaatctg tctcacaccc
     1141 ggagcgcgtt atgaaaaaga tcctgacaac cccgatcaaa gctgaagatc tgcaagatat
     1201 tcgcgtcggc gatgtgatct acctgaccgg tacgctggtg acctgccgtg acgtttgtca
     1261 ccgccgcttg atcgaactga aacgtccgct cccttacgat ctcaacggca aagcgatttt
     1321 ccacgctggc cccatcgtgc gcaaaaacgg cgataaatgg gagatggttt ccgttggccc
     1381 gacaaccagt atgcgtatgg aaagttttga acgtgaattt atcgagcaga ccggcgtgag
     1441 gcggaatggg gccgctgacc gaagaaggct gccagaaatt caaggcgcta catgtgattt
     1501 tcccggcagg ctgcgcggtg ctggcggcaa cccaggtgga agagattgaa gaagtgcact
     1561 ggacagagct cggaatgccg gagtcgctgt gggtctgccg ggtcaaagag ttcggcccgc
     1621 tgattgtctc tattgatacc cacggcaaca atctgatagc cgaaaacaaa aagctgttcg
     1681 ccgaacgccg cgatcccatc gtggaagaga tctgcgagca cgtccattac atcaaataac
     1741 cctcccggag aggctcgtcc cctctccttt ttcgcaggca taacacgatg aaaccttcca
     1801 ctgaatggtg gcgatacctt gcgccgctgg cggtcatcgc cattattgct ctaattccgg
     1861 ttcccgcagg gctggagagt catacctggc tctactttgc cgtttttact ggcgtgatcg
     1921 ttggactgat cctcgaaccc gtgccgggtg ccgtggtggc gatggtgggt atctccatca
     1981 tcgccatact ctctccctgg ctgctgttca gccccgaaca gctcgcccag ccaggcttta
     2041 agttcaccgc caaatccctc tcctgggcag tttctggttt ttctaattcg gttatctggc
     2101 tcattttcgc cgcctttatg tttggcacag gctatgaaaa aaccgggctt ggacgccgca
     2161 ttgcgctgat tctggtgaaa aagatgggac atcgcacgct gtttctcggc tatgcggtga
     2221 tgttctccga gctgatcctc gcacctgtaa caccgtccaa ctcggcgcgt ggtgcgggga
     2281 ttatctatcc catcatccgt aacctgccac cgctctatca atcacaacca aacgacagca
     2341 gttcgcgcag cattggctcg tacatcatgt ggatggggat tgttgccgac tgcgtgacca
     2401 gcgccatttt cttgacggcg atggcaccaa acttgctgtt aattggactg atgaaaagcg
     2461 catctcacgc cacgctgagt tggggcgact ggttcctcgg gatgttgccg ctcagtattt
     2521 tgctggtgct gctggttccc tggctggctt atgtgctgta cccgccggta ctgaagtctg
     2581 gcgatcaggt gccgcgctgg gcagagacgg aactgcaggc aatgggcccg ctctgttcgc
     2641 gtgaaaaacg gatgctgggg ctgatggtag gcgcgctggt gctgtggatt ttcggcggtg
     2701 attatatcga tgccgcgatg gtcggttaca gcgtggtggc actgatgctg cttctgcgca
     2761 ttatcagttg ggacgacatt gtcagtaata aagcggcgtg gaacgttttc ttctggctgg
     2821 cctcgcttat caccctcgct accggactca acaacactgg ttttattagc tggtttggca
     2881 aactgttagc aggcagctta agcggttatt cgccaacgat ggtgatggtg gcgttgattg
     2941 tggtgtttta tctgctgcgc tactttttcg ccagcgccac ggcgtatacc tccgccctcg
     3001 caccgatgat gattgccgct gcgctggcga tgccggaaat cccgctgccg gtgttctgcc
     3061 tgatggttgg cgcggcaatt ggtctgggga gcattcttac accatacgcc accggaccca
     3121 gtccgattta ctacggtagt ggttatctgc caacggcgga ttactggcga ctgggggcga
     3181 tttttgggct gatattcctc gtgttgctgg tgattaccgg cttactgtgg atgcccgtgg
     3241 tgttgcttta ggtgaggacg gtgccggaaa ttgctctccg gcacccaata gttttacgca
     3301 gccggtaact ccgccagcgg ccagcgcgga cgcacgctaa cgccgagatc cgccgtcgcg
     3361 cctgctttaa accgcaccat tccggcatag gcgatcatcg cgccgttatc agtacaaaac
     3421 tccggacgcg cgtagaacac ttcgccgcgg cgttttttca tcatttccgc cagcttcgcc
     3481 cgtaacgtgc ggttagcact cacgccgccc gccatgacca gtcgcttaaa gcccgtctga
     3541 tccaacgctc gcttacactt aatcatcaac gtatcgacca ccgcatcttc aaaggcgcgg
     3601 gcgatatcag cacgcgtctg gtcgtcggtg ccgttgtcac gaatcgtgtt cgccgcaaag
     3661 gttttcagac cagaaaagct gaaatccagc cccggacggt cggtcatcgg acgcgggaaa
     3721 acaaagcgcc cggcagtacc ctgagccgcc attttcgaca gtaacggtcc gccaggataa
     3781 tccagcccca gcagcttcgc ggttttatca aacgcttcac cggcggcatc atcgatagac
     3841 tcgccgagca gctcgtactg accaatgcca gtcacgctga ttaactgcgt atgaccgccg
     3901 gacaccagca gcgcgacaaa cggaaattcc ggcgggttat cttccagcat cggcgctaac
     3961 agatgccctt ccatatggtg taccgggatt gccggaacgt tccaggcaaa cgccagagaa
     4021 cgccccacgg ttgcgccaac cagcagtgcg ccgactaatc cagggcctgc ggtataggcc
     4081 acagcatcaa tgtcttttgc cgttaagcca gactccttta gcgccgcctg gatcaacggt
     4141 acggttttgc gcacgtgatc gcgggaggcc agttcaggca cgacgccgcc gtagtcagcg
     4201 tgcaatttca cctgactata caattggttg gctaacaaac ctttttcatc gtcgtaaatg
     4261 gcgatgccgg tttcatcgca ggaagtttca atacccagta cacgcatgac ttgttttacc
     4321 tcgctttatt accgcgcagt gtaggaccaa tgcgggttga tgtaaaactt tgttcgcccc
     4381 tggagaaagc ctcgtgtata ctcctcaccc ttataaaagt ccctttcaaa aaggccgcgg
     4441 tgctttacaa agcagcagca attgcagtaa aattccgcac cattttgaaa taagctggcg
     4501 ttgatgccag cggcaaaccg aattaatcaa aggtgagagg cacatgccgg taattaaagt
     4561 acgtgaaaac gagccgttcg acgtagctct gcgtcgcttc aagcgttcct gcgaaaaagc
     4621 aggtgttctg gcggaagttc gtcgtcgtga gttctatgaa aaaccgacta ccgaacgtaa
     4681 gcgcgctaaa gcttctgcag tgaaacgtca cgcgaagaaa ctggctcgcg aaaacgcacg
     4741 ccgcactcgt ctgtactaat tccccgagag cgttgctctc cgatcagacc gagttgtagt
     4801 tgtaaggccg tgcttccgaa aggaatgcgc ggcttatttt cgtttatgaa ttgctaaaaa
     4861 tcggggccta tggctggacg aatcccacgc gtattcatta atgatctgct ggcacgcact
     4921 gacatcgtcg atctgatcga tacccgtgtg aagctgaaaa agcagggcaa gaatttccac
     4981 gcgtgttgtc cattccacaa cgagaaaacc ccgtcattca ccgttaacgg tgagaaacag
     5041 ttttaccact gctttggatg tggcgcgcac ggcaacgcga tcgacttcct gatgaactac
     5101 gacaagcttg agttcgtcga aacggtcgaa gagctggcag caatgcacaa tcttgaagtg
     5161 ccatttgaag caggcagcgg ccccagccag atcgagcgcc atcagaggca aacgctttat
     5221 cagttgatgg acggtctgaa tacgttttac caacaatctt tacaacaacc tgttgccacg
     5281 tctgcgcgcc agtatctgga aaaacgcgga ttaagccacg aggttatcgc tcgctttgcg
     5341 attggttttg cgccccccgg ctgggacaac gtcctgaagc ggtttggcgg caatccagaa
     5401 aatcgccagt cattgattga tgcggggatg ttggtcacta acgatcaggg acgcagttac
     5461 gatcgtttcc gcgagcgggt gatgttcccc attcgcgata aacgcggtcg ggtgattggt
     5521 tttggcgggc gcgtgctggg cgacgatacc cccaaatacc tgaactcgcc ggaaacagac
     5581 attttccata aaggccgcca gctttacggt ctttatgaag cgcagcagga taacgctgaa
     5641 cccaatcgtc tgcttgtggt cgaaggctat atggacgtgg tggcgctggc gcaatacggc
     5701 attaattacg ccgttgcgtc gttaggtacg tcaaccaccg ccgatcacat acaactgttg
     5761 ttccgcgcga ccaacaatgt catttgctgt tatgacggcg accgtgcagg ccgtgatgcc
     5821 gcatggcgag cgctggaaac ggcgctgcct tacatgacag acggccgtca gctacgcttt
     5881 atgtttttgc cggatggcga agaccctgac acgctggtac gaaaagaagg taaagaagcg
     5941 tttgaagcgc ggatggagca ggcgatgcca ctctccgcat ttctgtttaa cagcctgatg
     6001 ccgcaagttg atctgagtac ccctgacggg cgcgcacgtt tgagtacgct ggcactgcca
     6061 ttgatatcgc aagtgccggg cgaaacgctg cgaatatatc ttcgtcagga attaggcaac
     6121 aaattaggca tacttgatga cagccagctt gaacgattaa tgccaaaagc ggcagagagc
     6181 ggcgtttctc gccctgttcc gcagctaaaa cgcacgacca tgcgtatact tatagggttg
     6241 ctggtgcaaa atccagaatt agcgacgttg gtcccgccgc ttgagaatct ggatgaaaat
     6301 aagctccctg gacttggctt attcagagaa ctggtcaaca cttgtctctc ccagccaggt
     6361 ctgaccaccg ggcaactttt agagcactat cgtggtacaa ataatgctgc cacccttgaa
     6421 aaactgtcga tgtgggacga tatagcagat aagaatattg ctgagcaaac cttcaccgac
     6481 tcactcaacc atatgtttga ttcgctgctt gaactgcgcc aggaagagtt aatcgctcgt
     6541 gagcgcacgc atggtttaag caacgaagaa cgcctggagc tctggacatt aaaccaggag
     6601 ctggcgaaaa agtgatttaa cggcttaagt gccgaagagc gatcgggaag cccccgacag
     6661 ccgcactgag aggcagcggc aaatatataa gtacgccctc gtaattatcg ttggcggtaa
     6721 acaaccgttg gatttcagcg ttaacggctg aaggacatcg ggtcaatcgc ccaacaccaa
     6781 cctcatgaaa taagtgtgga taccgtctta tggagcaaaa cccgcagtca cagctgaaac
     6841 ttcttgtcac ccgtggtaag gagcaaggct atctgaccta tgccgaggtc aatgaccatc
     6901 tgccggaaga tatcgtcgat tcagatcaga tcgaagacat catccaaatg atcaacgaca
     6961 tgggcattca ggtgatggaa gaagcaccgg atgccgatga tctgatgctg gctgaaaaca
     7021 ccgcggacga agatgctgcc gaagccgccg cgcaggtgct ttccagcgtg gaatctgaaa
     7081 tcgggcgcac gactgacccg gtacgcatgt acatgcgtga aatgggcacc gttgaactgt
     7141 tgacccgcga aggcgaaatt gacatcgcta agcgtattga agacgggatc aaccaggttc
     7201 aatgctccgt tgctgaatat ccggaagcga tcacctatct gctggaacag tacgatcgtg
     7261 ttgaagcaga agaagcgcgt ctgtccgatc tgatcaccgg ctttgttgac ccgaacgcag
     7321 aagaagatct ggcacctacc gccactcacg tcggttctga gctttcccag gaagatctgg
     7381 acgatgacga agatgaagac gaagaagatg gcgatgacga cagcaccgat gatgacaaca
     7441 gcatcgaccc ggaactggct cgcgaaaaat ttgcggaact acgcgctcag tacgttgtaa
     7501 cgcgtgacac catcaaagcg aaaggtcgca gtcacgctgc cgctcaggaa gagatcctga
     7561 aactgtctga agtattcaaa cagttccgcc tggtgccgaa gcagtttgac tacctggtca
     7621 acagcatgcg cgtcatgatg gaccgcgttc gtacgcaaga acgtctgatc atgaagctct
     7681 gcgttgagca gtgcaaaatg ccgaagaaaa acttcattac cctgtttacc ggcaacgaaa
     7741 ccagcgatac ctggttcaac gcggcaattg cgatgaacaa gccgtggtcg gaaaaactgc
     7801 acgatgtctc tgaagaagtg catcgcgccc tgcagaaact gcagcagatt gaagaagaaa
     7861 ccggcctgac catcgagcag gttaaagata tcaaccgtcg tatgtccatc ggtgaagcga
     7921 aagcccgccg tgcgaagaaa gagatggttg aagcgaactt acgtctggtt atttctatcg
     7981 ccaagaaata caccaaccgt ggcttgcagt tccttgacct gattcaggaa ggcaacatcg
     8041 gtctgatgaa agcggttgat aaattcgaat accgccgtgg ttacaagttc tccacctacg
     8101 caacctggtg gatccgtcag gcgatcaccc gttctatcgc ggatcaggcg cgcaccatcc
     8161 gtattccggt gcatatgatt gagactatca acaaactcaa ccgtatttct cgccagatgc
     8221 tgcaagagat gggccgtgaa ccgacgccgg aagaactggc tgaacgtatg ctgatgccgg
     8281 aagacaagat ccgcaaagtg ctgaagatcg ccaaagagcc aatctccatg gaaacgccga
     8341 tcggtgatga tgaagattcg catctggggg atttcatcga ggataccacc ctcgagctgc
     8401 cgctggattc tgcgaccacc gaaagcctgc gtgcggcaac gcacgacgtg ctggctggcc
     8461 tgaccgcgcg tgaagcgaaa gttctgcgta tgcgtttcgg tatcgatatg aacaccgacc
     8521 acacgctgga agaagtgggt aaacagttcg acgttacccg cgaacgtatc cgtcagatcg
     8581 aagcgaaggc gctgcgcaaa ctgcgtcacc cgagccgttc tgaagtgttg cgtagcttcc
     8641 tggacgatta atcggtaggc cggatcaggc gttacgccgc acccggcact agtccctctg
     8701 cacaaacgcc accttttc
//
LOCUS       DADMHC010000168         8600 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.171, whole genome shotgun sequence.
ACCESSION   DADMHC010000168 DADMHC010000000
VERSION     DADMHC010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8600
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.171"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..182
                     /locus_tag="JNZ57_003220"
     CDS             <1..182
                     /locus_tag="JNZ57_003220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312842.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HAY8829326.1"
                     /translation="AIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKAKGGRQK
                     GEVVGVDDQCKEHKE"
     gene            401..643
                     /locus_tag="JNZ57_003221"
     CDS             401..643
                     /locus_tag="JNZ57_003221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709694.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829327.1"
                     /translation="MNSLAGIDMGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVD
                     QYLINQSQTARTSVPGIWQGCEEDGVEYQRKLREEW"
     gene            complement(973..1902)
                     /gene="fdhE"
                     /locus_tag="JNZ57_003222"
     CDS             complement(973..1902)
                     /gene="fdhE"
                     /locus_tag="JNZ57_003222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HAY8829328.1"
                     /translation="MSIRIIPQDELGSSEKRTADMIPPLLFPRLKNLYNRRAERLREL
                     AENNPLDDYLRFAALIAHAQEVVLYDHPLEMDLTARIKEASAQGKPPLDIHVLPRDKH
                     WQKLLMALIAELKPEMSGPALAVIENLEKASTQELEDMASALFASDFSSVSSDKAPFI
                     WAALSLYWAQMANLIPGKARAEYGEQRQYCPVCGSMPVSSMVQIGTTQGLRYLHCNLC
                     ETEWHVVRVKCSNCEQSGKLHYWSLDDEQAAIKAESCDDCGTYLKILYQEKEPKVEAV
                     ADDLASLVLDARMEQEGYARSSINPFLFPGEGE"
     gene            complement(1899..2534)
                     /gene="fdoI"
                     /locus_tag="JNZ57_003223"
     CDS             complement(1899..2534)
                     /gene="fdoI"
                     /locus_tag="JNZ57_003223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase cytochrome b556 subunit"
                     /protein_id="HAY8829329.1"
                     /translation="MKRRDTIVRYTAPERINHWITAFCFILAAVSGLGFLFPSFNWLM
                     QIMGTPQLARILHPFVGVVMFASFIIMFFRYWHHNLINRDDIFWVKNIRKIVVNEEVG
                     DTGRYNFGQKCVFWAAIIFLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVAL
                     IVVIMVHIYAALWVKGTITAMVEGWVTSAWAKKHHPRWYREVRKTTEKKAE"
     gene            complement(2531..3433)
                     /gene="fdxH"
                     /locus_tag="JNZ57_003224"
     CDS             complement(2531..3433)
                     /gene="fdxH"
                     /locus_tag="JNZ57_003224"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit beta"
                     /protein_id="HAY8829330.1"
                     /translation="MAYQSQDIIRRSATNGLTPAPQARDFQEEVAKLIDVTTCIGCKA
                     CQVACSEWNDIRDTVGNNIGVYDNPNDLSAKSWTVMRFSEVEQNDKLEWLIRKDGCMH
                     CSDPGCLKACPAEGAIIQYANGIVDFQSEQCIGCGYCIAGCPFDIPRLNPEDNRVYKC
                     TLCVDRVVVGQEPACVKTCPTGAIHFGTKESMKTLASERVAELKTRGYDNAGLYDPAG
                     VGGTHVMYVLHHADKPNLYHGLPENPEISETVKFWKGIWKPLAAVGFAATFAASIFHY
                     VGVGPNRADEEENNLHEEKDEERK"
     gene            complement(3446..6496)
                     /gene="fdnG"
                     /locus_tag="JNZ57_003225"
     CDS             complement(3446..6496)
                     /gene="fdnG"
                     /locus_tag="JNZ57_003225"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(5909..5911),aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HAY8829331.1"
                     /translation="MQVSRRQFFKICAGGMAGTTAAALGFAPSVALAETRQYKLLRTR
                     ETRNTCTYCSVGCGLLMYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFI
                     HSESRLKFPEYRAPGSDKWQQISWEEAFDRIAKLMKEDRDANYIAQNAEGVTVNRWLS
                     TGMLCASASSNETGYLTQKFSRALGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWV
                     DIKNANLVVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTAAVADYYAPIR
                     SGTDIAFLSGVLLYLLNNEKFNREYTEAYTNASLIVREDYGFEDGLFTGYDAEKRKYD
                     KSSWTYELDENGFAKRDTTLQHPRCVWNLLKQHVSRYTPDVVENICGTPKDAFLKVCE
                     YIAETSAHDKTASFLYALGWTQHSVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSN
                     IQGLTDLGLLSQSLPGYMTLPSEKQTDLQTYLTANTPKPLLEGQVNYWGNYPKFFVSM
                     MKAFFGDKATAENSWGFDWLPKWDKGYDVLQYFEMMKEGKVNGYICQGFNPVASFPNK
                     NKVIGCLSKLKFLVTIDPLNTETSNFWQNHGELNEVDSSKIQTEVFRLPSTCFAEENG
                     SIVNSGRWLQWHWKGADAPGIALTDGEILSGIFLRLRKMYAEQGGANPDQVLNMTWNY
                     AIPHEPKSEEVAMESNGKALADITDPATGAVIVKKGQQLSSFAQLRDDGTTSCGCWIF
                     AGSWTPEGNQMARRDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGNPWDPKRQL
                     LKWDGTKWTGWDIPDYSAAPPGSGVGPFIMQQEGMGRLFALDKMAEGPFPEHYEPFET
                     PLGTNPLHPNVISNPAARIFKDDAEALGKADKFPYVGTTYRLTEHFHYWTKHALLNAI
                     LQPEQFVEIGESLANKLGIAQGDTVKVSSNRGYIKAKAVVTKRIRTLKANGKDIDTIG
                     IPIHWGYEGVAKKGFIANTLTPFVGDANTQTPEFKSFLVNVEKV"
     gene            6690..7523
                     /gene="fdhD"
                     /locus_tag="JNZ57_003226"
     CDS             6690..7523
                     /gene="fdhD"
                     /locus_tag="JNZ57_003226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HAY8829332.1"
                     /translation="MKKTQRKEIENVTNITGVRQIELWRRDDLQHPRLDEVAEEVPVA
                     LVYNGISHVVMMASPKDLEYFALGFSLSEGIIESPRDIFGMDVVPSCNGLEVQIELSS
                     RRFMGLKERRRALAGRTGCGVCGVEQLNDIGKPVQPLPFTQTFDLNKLDDALRHLNDF
                     QPVGQLTGCTHAAAWMLPSGELVGGHEDVGRHVALDKLLGRRSQEGESWQQGAVLVSS
                     RASYEMVQKSAMCGVEILFAVSAATTLAVEVAERCNLTLVGFCKPGRATVYTHPQRLS
                     N"
     gene            7677..>8600
                     /locus_tag="JNZ57_003227"
     CDS             7677..>8600
                     /locus_tag="JNZ57_003227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiG family protein"
                     /protein_id="HAY8829333.1"
                     /translation="MKRNLLSSAIIVAIMALGLTGCDDKKAETETPPPANSQPAAPAP
                     EAPVAKAEAKPETPAQPVVDEQAVFDEKMDVYIKCYNKLQIPVQRSLARYVDWLKDFK
                     QGPTGEERTVYGIYGISESNLAECEKGVKSAVALTPALQPIDGVAVSYIDAAVALGNT
                     INEMDKYYTQENYKDDAFAKGKTLHQTFLKNLEAFEPVAESYHAAIQEINDKRQLAEL
                     KNIEEREGKIFHYYSLAVMISAKQINNLISQEKFDVDAAMKKVSELETLVAQAKEADK
                     GGMNFSFINSAGQYQLEAKKYVRRIRDKVPYS"
BASE COUNT         2050 a         2178 c         2271 g         2101 t
ORIGIN      
        1 aggcaattaa acggctgaac aagcttcggg gctggcgtaa ggtttcacga tctgcaattt
       61 tacgcgaagc ggttgagcaa tatctggagc ggcagcaatt tccggtgcgt aaagcaaagg
      121 gaggcaggca aaagggggag gtagttggtg ttgatgatca gtgtaaggag cataaggaat
      181 gaaaaaaatt tttcattctt gaatataaaa aaacagatgc ccttattctg gtattaatac
      241 aaggctgttt tacttgaact tataataact gcaactgtta catcgtatct ggaaaacgcc
      301 tcgcaaaaat aaaaaatgat gcgtaaatga gctttcttta aagattcggc aagggtactt
      361 ttctctccat agattcaaaa atgatattgg cgagatattt atgaactctc tggcaggtat
      421 agatatgggc agaattttac tcgatttatc gaatgaggtg attaagcaac ttgatgatct
      481 cgaggtgcag cgtaatcttc ctcgtgcgga cctattaagg gaagcggtag atcaatacct
      541 gataaatcaa tcgcaaacag caagaaccag tgttcctggc atctggcaag ggtgtgagga
      601 agatggtgtc gaatatcagc gtaagctgcg cgaggaatgg taatgggaaa aaatgatgtc
      661 aatcagattg atgacaacgt gcgcgttgtt catgccggat gcggcgtgaa cgccttatcc
      721 ggcctacaaa gtcatgcaaa ttcaatatat tgaagtttat tggtaggcct gataagcgca
      781 gcgcatcagg caatcatacg cttgtcatca gtgacatacc cataacctta tcgatgtgtt
      841 ggagggaaga acgaggcaaa cagacaattg cggcatgatc ttgaatgggt aacgcggaat
      901 acgagagatg gtgtcgtcac accctatgag ctgtaatccg ggcgaccagc gccacccgga
      961 aaacgtcaga gattactccc cttcacccgg aaacaggaac gggttgatgg aactgcgggc
     1021 atagccttct tgctccattc gcgcgtccag taccagagaa gcgaggtcat ctgccacggc
     1081 ttcaactttc ggttcttttt cctgataaag aatcttcagg taagtgccgc agtcatcgca
     1141 gctttcggct ttaatcgcgg cctgttcgtc atccagcgac cagtaatgca gtttgccgct
     1201 ctgttcacag ttgctgcatt ttacgcgcac tacgtgccat tcggtttcac acaggttgca
     1261 gtgcaggtaa cgcagaccct gagtggtgcc aatttgcacc atgctggaca ccggcataga
     1321 accacaaacc gggcaatatt gacgttgctc gccgtattca gcgcgggctt tgccggggat
     1381 cagattggcc atctgcgccc agtagagcga cagtgcagcc cagataaacg gcgctttatc
     1441 gctgctgacg gatgagaaat cagaggcaaa cagtgcgctg gccatatctt ccagctcctg
     1501 agtcgatgcc ttctccagat tctcaatcac tgccagcgcc gggccgctca tttcaggttt
     1561 cagctcagca atcagcgcca tcagcagctt ttgccagtgc ttatcacgcg gcagaacgtg
     1621 aatatccagc gggggcttgc cctgtgcgct ggcttcttta atgcgcgcgg tcagatccat
     1681 ctccagcgga tggtcgtaca gcaccacttc ctgggcgtgg gcgataagcg cagcaaagcg
     1741 caggtaatca tccagcggat tattttctgc cagctcgcgc agacgctcgg cgcggcggtt
     1801 gtataaattc ttgagccgag ggaacaataa cggcggaatc atatccgccg tacgtttctc
     1861 gctcgaaccc agctcatctt gcgggattat gcgaatactc attcagcttt cttttccgtt
     1921 gtcttgcgga cctcacggta ccagcgcggg tgatgtttct tcgcccaggc gctggtaacc
     1981 catccttcca ccatggcggt aatcgtgcct ttcacccaaa gggcggcgta gatatgcacc
     2041 atgataacca caattaacgc cactgcggca aatgaatgca gcattaacgc gaatcggatc
     2101 accgggattg agaaagcagg cgcaaaataa ggacgccaga taatcacgcc gctcaccagc
     2161 agcagaacca ggaaaataat cgccgcccag aaaacgcatt tctgaccgaa gttataacgc
     2221 ccggtgtcac ctacttcctc gttgacgacg atcttacgaa tattcttcac ccaaaagata
     2281 tcatcccgat tgattaggtt gtgatgccag taacggaaaa acatgatgat gaacgaggca
     2341 aacataacca cgccgacaaa cgggtgcaga attcgcgcca gctgcggtgt gcccatgatt
     2401 tgcatcaacc agttgaagga cgggaacaaa aagcccagcc cgctcaccgc cgccaggatg
     2461 aagcagaagg cggtgatcca gtggttgata cgttccggcg cggtgtagcg cacgatggtg
     2521 tcacgtcgtt tcatttgcgc tcctcgtctt tctcttcgtg cagattattc tcttcctcat
     2581 ccgcacggtt cggaccgaca cccacgtagt ggaagatact ggctgcgaag gtagccgcaa
     2641 agccaacagc tgcgagcggt ttccagatgc ctttccagaa tttcacggtt tcgctgattt
     2701 ccgggttctc cggcaagcca tgatacagat ttggcttgtc agcatggtgc agcacgtaca
     2761 taacgtgtgt accaccgacg cctgccggat cgtacaggcc cgcattgtcg taaccgcggg
     2821 ttttcagctc cgccacgcgc tcgctcgcca gcgttttcat cgactctttc gtaccgaagt
     2881 gaatcgcgcc cgttgggcag gtcttcacgc aggctggttc ttgcccaacc accacgcggt
     2941 caacgcacag cgtacatttg tagacgcggt tgtcttccgg gttgaggcgc ggaatgtcga
     3001 acggacagcc cgcaatgcaa taaccgcagc caatgcactg ctcggactgg aagtcgacga
     3061 taccgttggc atactgaata attgcacctt ccgccgggca cgctttcaga cagcctggat
     3121 cggaacagtg catacagccg tctttgcgga tcagccattc cagtttgtcg ttctgctcca
     3181 cttccgagaa gcgcatcacc gtccacgatt tggcacttaa atcattgggg ttgtcgtaca
     3241 ccccaatgtt attgccgacg gtatcgcgaa tgtcgttcca ctctgaacac gccacctgac
     3301 aggctttaca gccgatacag gtggtgacgt cgatgagttt cgccacttct tcctggaagt
     3361 cccgcgcctg aggcgcgggg gtcagaccgt tagtcgcgga acgacgaatg atatcttgag
     3421 attgataagc catatgtcgt ctccgttaca ccttttccac attcacaagg aaggacttaa
     3481 actccggcgt ctgcgtgttc gcatcaccaa cgaatggcgt taaagtattg gcaataaagc
     3541 cttttttagc tacgccttca tagccccagt gaatcggaat accgatggta tcgatatctt
     3601 tgccgttcgc tttcagcgtg cgaatacgtt tggtcaccac cgctttggct ttgatatagc
     3661 cacggttgga ggagactttc acggtatcgc cctgggcaat gccaagttta ttcgccagcg
     3721 actccccgat ttccacaaac tgctctggct gcaaaatcgc gttcaacagc gcgtgtttgg
     3781 tccagtagtg gaagtgctcg gtcagacgat aggtggttcc gacatacggg aacttatcgg
     3841 ctttacccaa tgcttcggcg tcgtctttaa agatacgtgc agccgggttc gagataacgt
     3901 ttggatgcag cgggttagtt cccagcggcg tttcaaacgg ctcgtagtgt tccgggaacg
     3961 gaccttccgc catcttatcg agggcaaaca gacgccccat gccttcctgc tgcatgataa
     4021 acggcccgac gccgctaccc ggaggcgctg cgctgtagtc cggaatatcc cagccggtcc
     4081 acttagtgcc gtcccatttc agcaactgac gcttcggatc ccacgggtta ccctgcggat
     4141 ctgcggaggc gcggttatac agaatgcggc ggttaagcgg ccatgcccat gcccagccca
     4201 gcgtgttacc gaggccagac ggatcggcgt tatcacgacg cgccatctgg ttgccttccg
     4261 gcgtccagct accggcgaaa atccagcagc cacaggaggt tgtaccgtca tcgcgcaatt
     4321 gggcgaacga gctaagttgt tggcctttct tgacgataac cgcaccggtt gccggatcgg
     4381 taatatcggc cagcgcctta ccgttgctct ccatcgctac ttcttccgac ttcggctcat
     4441 gcggaatggc gtagttccag gtcatgttca gcacctgatc cgggttcgcg ccaccctgtt
     4501 cggcatacat cttgcgcaag cgcaggaaga taccggagag gatctcaccg tcagtcagcg
     4561 caatccccgg ggcgtccgca cctttccagt gccactgcaa ccagcgacct gagttaacga
     4621 ttgaaccgtt ctcttctgcg aagcaggtcg atggcagacg gaacacttcg gtctggatct
     4681 tcgacgagtc aacttcgttc agctcaccgt ggttctgcca gaagttagag gtttcagtgt
     4741 tcagcgggtc gatggtgacg aggaacttca gtttcgacag acaaccgatc actttgtttt
     4801 tgttcgggaa tgaggcaaca gggttaaaac cctggcagat atagccattg accttgccct
     4861 ctttcatcat ctcgaagtat tgcaggacgt cgtagccttt atcccacttc ggcaaccagt
     4921 caaagcccca gctattttcc gccgtcgctt tatcaccaaa gaaggccttc atcatagaga
     4981 cgaagaattt cgggtagttg ccccagtagt ttacctggcc ttccagcagc ggttttggcg
     5041 tgttggcggt aaggtaggtt tgcagatcgg tctgcttctc gcttggcagc gtcatgtaac
     5101 ctggcaggct ctgcgacagc agccccaggt ccgtcagccc ctgaatattg gagtgaccgc
     5161 gcagggcgtt aacgccgccg cctgccatcc ccatattgcc gagcagcagc tggatcatcg
     5221 ccatcgtacg aatgttttgc gcaccaacgg agtgttgcgt ccagccgagg gcatacagga
     5281 acgaggcagt tttatcgtga gcactggttt ctgcgatgta ttcgcagact ttcaggaacg
     5341 cgtcttttgg cgtaccacag atgttttcaa ccacatctgg cgtgtagcgg gaaacgtgct
     5401 gtttcagcaa gttccacacg cagcgcggat gttgcagcgt ggtatcgcgt ttggcgaagc
     5461 cgttttcgtc cagttcgtaa gtccaggagg atttatcgta cttgcgtttt tccgcgtcat
     5521 agccggtgaa caggccatct tcaaagccgt aatcctcacg cacgatcagg ctggcgttgg
     5581 tataggcttc ggtgtattcg cggttgaatt tttcattgtt cagcaggtac agcaatacgc
     5641 ctgacaggaa agcaatgtca gtaccggaac gaataggggc atagtagtca gctaccgccg
     5701 ccgtacgcgt aaagcgagga tcgatcacaa tcagcttcgc gccgttgtga attttggctt
     5761 ccatcgccca gcggaacccg accgggtgag cttcagcggc gttaccgccc atcaccacga
     5821 cgaggttggc gttcttgatg tcgacccagt ggttggtcat cgcaccgcga ccaaatgttg
     5881 gagcaagact tgctaccgtt ggtccgtgtc agacacgcgc ctggttgtcg accgcgagca
     5941 tacccagcgc gcgggagaat ttttgcgtta aatagccggt ttcgttactc gacgcggaag
     6001 cacacagcat cccggtggag agccagcggt taacagtcac gccttcggcg ttttgcgcaa
     6061 tgtagttagc atcgcggtct tctttcatca gtttggcgat gcgatcaaac gcctcttccc
     6121 aactgatttg ctgccattta tcagaacctg gcgcacggta ttccggaaac ttcagacggc
     6181 tttcggagtg gatgaaatcc accaggccag cgcctttcgg acaaagtgca ccgcggttga
     6241 ccgggtgatc cggatcgcct tcgatatgga agatagatgc tttggcgttt tttgctccgt
     6301 caccgaggct gtacatcaac agcccacagc ctacggaaca ataggtgcag gtattacggg
     6361 tttcgcgggt gcgcagcagt ttatactgcc gggtttccgc gagtgctacg ctgggtgcaa
     6421 aacctagtgc cgctgccgtg gtgcctgcca taccgccagc gcagatctta aagaactgcc
     6481 ttctgctgac ctgcatggat tgctccttgt ttcgacattg tcacgtccca tttacattcg
     6541 cttgctgcgt gtgcagggag tgggagttat ttttctttgc ggaaggggcc gcaaaggtcc
     6601 agaattggct caatttccct ccatccagga agggtttgta acagaatacc ataatgttgg
     6661 tgtgtgtgtt cttatctggt taagagaaag tgaaaaaaac acagcgaaaa gaaatcgaaa
     6721 atgtgacaaa tatcacaggt gttcgtcaaa ttgagttatg gcggcgtgat gatttacaac
     6781 acccacggtt agatgaggtc gcggaagaag ttcccgttgc gctggtctac aacggcattt
     6841 cgcatgtggt gatgatggcg tcgcccaaag accttgagta ctttgcgctc ggtttttcgc
     6901 tttccgaggg gattatcgaa agtccgcgcg atatcttcgg catggatgtc gttccttcct
     6961 gtaatggtct tgaagtacaa attgagcttt ccagccgccg ctttatgggg ttgaaggagc
     7021 gccgccgggc gctggcggga cgtacgggct gtggcgtatg cggcgtggag caacttaatg
     7081 acatcggaaa accggtgcag ccgctaccgt tcacccagac gtttgatctc aacaaactgg
     7141 atgatgcatt acgtcatctc aacgattttc agccagtggg gcaactgact ggttgtactc
     7201 acgccgctgc ctggatgttg ccatctggcg aactggtcgg cgggcatgaa gacgtgggtc
     7261 gccatgtggc gctggacaaa ctgttaggcc gccggtcaca agaaggggaa agctggcagc
     7321 aaggtgcggt actggtttcc agtcgtgcca gttatgaaat ggtgcaaaag tcggcgatgt
     7381 gcggcgtaga gattttgttt gcggtgtctg ccgcgaccac gcttgctgta gaagtggctg
     7441 agcgctgtaa tctgacactg gtaggttttt gtaaaccggg tcgggcaacg gtttataccc
     7501 atccgcagcg tttgagcaat taattaaaat aagtcctgcg atatatatta aattgcagga
     7561 cttattcatt tcgtgaattt tattattttt atttataaat aaaacgcgtg tagtggcgtt
     7621 ttcttttttc atttattatg ttcactctct tatctatata tttataaggc aattaaatga
     7681 aaaggaattt attatcttcc gctattatag tcgccatcat ggccctcggt ctgacgggtt
     7741 gtgatgataa aaaagccgaa acagaaacgc ccccgcctgc caatagtcaa cctgccgcac
     7801 cagctcctga agctcccgtt gcaaaagcag aagctaaacc tgaaacacct gcgcaaccgg
     7861 tggtcgatga acaagcggtt ttcgacgaaa aaatggatgt ctatatcaag tgctataaca
     7921 agttacagat ccctgtacag cgcagtctgg cgcgttatgt tgactggctg aaagatttta
     7981 aacaggggcc taccggtgaa gagcgtactg tttatggcat ctacggcatt agtgaatcca
     8041 acctcgctga gtgtgaaaaa ggcgtaaaaa gtgctgtggc gttaacgcct gcgctgcaac
     8101 caattgatgg cgtggcggtg agttatatcg atgctgccgt ggcgttgggt aataccatta
     8161 acgaaatgga taaatattac acccaggaaa attataaaga cgatgcgttt gcgaaaggga
     8221 aaacgctgca ccagacattc ttaaaaaatc tggaagcctt tgaacctgta gcagaatctt
     8281 atcatgcggc gattcaggaa attaacgata agcgccagct tgcggaactg aaaaatattg
     8341 aagaaagaga agggaaaata ttccactact attctctggc agtcatgatt tcagcgaaac
     8401 aaattaataa cctgatatcg caagagaagt ttgatgttga tgcggcaatg aagaaagtgt
     8461 ctgaattgga aacgctggtg gcgcaggcca aagaagcgga taaaggcggc atgaatttct
     8521 cgtttattaa ttcggcaggc cagtatcaac tcgaggctaa aaaatacgtt cgccgcatca
     8581 gagataaagt cccgtactct
//
LOCUS       DADMHC010000169         8583 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.172, whole genome shotgun sequence.
ACCESSION   DADMHC010000169 DADMHC010000000
VERSION     DADMHC010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8583
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.172"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..463)
                     /gene="bglG"
                     /locus_tag="JNZ57_003228"
     CDS             complement(<1..463)
                     /gene="bglG"
                     /locus_tag="JNZ57_003228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional antiterminator BglG"
                     /protein_id="HAY8829334.1"
                     /translation="MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSS
                     GIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHC
                     QFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEV"
     gene            complement(749..1474)
                     /gene="phoU"
                     /locus_tag="JNZ57_003229"
     CDS             complement(749..1474)
                     /gene="phoU"
                     /locus_tag="JNZ57_003229"
                     /EC_number="3.5.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HAY8829335.1"
                     /translation="MDSLNLNKHISGQFNAELESIRTQVMTMGGMVEQQLSDAITAMH
                     NQDSDLAKRVIEGDKNVNMMEVAIDEACVRIIAKRQPTASDLRLVMVISKTIAELERI
                     GDVADKICRTALEKFSQQHQPLLVSLESLGRHTIQMLHDVLDAFARMDIDEAVRIYRE
                     DKKVDQEYEGIVRQLMTYMMEDSRTIPSVLTALFCARSIERIGDRCQNICEFIFYYVK
                     GQDFRHVGGDELDKLLAGKDSDK"
     gene            complement(1489..2262)
                     /gene="pstB"
                     /locus_tag="JNZ57_003230"
     CDS             complement(1489..2262)
                     /gene="pstB"
                     /locus_tag="JNZ57_003230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000063125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HAY8829336.1"
                     /translation="MSMVETAPSKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGP
                     SGCGKSTLLRTFNKMFELYPEQRAEGEILLDGDNILTNSQDIALLRAKVGMVFQKPTP
                     FPMSIYDNIAFGVRLFEKLSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQ
                     RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARC
                     SDHTAFMYLGELIEFSNTDDLFTKPAKKQTEDYITGRYG"
     gene            complement(2353..3243)
                     /gene="pstA"
                     /locus_tag="JNZ57_003231"
     CDS             complement(2353..3243)
                     /gene="pstA"
                     /locus_tag="JNZ57_003231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HAY8829337.1"
                     /translation="MAMVEIQTTAALAESRRKMQARRRLKNRIALTLSMATMAFGLFW
                     LIWILMSTITRGIDGMSLALFTEMTPPPNTEGGGLANALAGSGLLILWATVFGTPLGI
                     MAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQMEHFSGWAGVIAL
                     ALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAI
                     ARIAGETAPLLFTALSNQFWSTDMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIIT
                     LCVLLLNILARVVFAKNKHG"
     gene            complement(3243..4202)
                     /gene="pstC"
                     /locus_tag="JNZ57_003232"
     CDS             complement(3243..4202)
                     /gene="pstC"
                     /locus_tag="JNZ57_003232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008806729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstC"
                     /protein_id="HAY8829338.1"
                     /translation="MAATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIIS
                     SWPSIQKFGLAFLWTKEWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTE
                     LAPGWLKRPLGIAIELLAAIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGAL
                     FSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRI
                     VLPFTKNGVIGGIMLGLGRALGETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFA
                     EAESGLHVAALMELGLILFVITFIVLAASKFMIMRLAKNEGAR"
     gene            complement(4289..5329)
                     /gene="pstS"
                     /locus_tag="JNZ57_003233"
     CDS             complement(4289..5329)
                     /gene="pstS"
                     /locus_tag="JNZ57_003233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HAY8829339.1"
                     /translation="MKVMRTTVATVVAATLSMSAFSVFAEASLTGAGATFPAPVYAKW
                     ADTYQKETGNKVNYQGIGSSGGVKQIIANTVDFGASDAPLSDEKLAQEGLFQFPTVIG
                     GVVLAVNIPGLKSGELVLDGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRR
                     ADGSGTSFVFTSYLAKVNEEWKNNVGTGSTVKWPIGLGGKGNDGIAAFVQRLPGAIGY
                     VEYAYAKQNNLAYTKLISADGKPVSPTEENFANAAKGADWSKTFAQDLTNQKGEDAWP
                     ITSTTFILIHKDQKKPEQGTEVLKFFDWAYKTGAKQANDLDYASLPDSVVEQVRAAWK
                     TNIKDSSGKPLY"
     gene            complement(5577..6650)
                     /locus_tag="JNZ57_003234"
     CDS             complement(5577..6650)
                     /locus_tag="JNZ57_003234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001685709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8829340.1"
                     /translation="MNKYIKQWCFAVFMLSLSSVALAAPKGICTPDNGVFHSTLDFSG
                     YLITANENKVGTTFNTTVTNGSSYPGRCHCDTGNVGEFPYIYYTSKINQALTYAGVHS
                     NINYYDLNPNLDVGIAIDILGVGYVNAPFEYHANNPSGNTKYNCNRIEPLSISSGAKA
                     IVYFYIKKTFAGKLIIPETKIVTLYGTISRDTPVDYSQPMADVYIRGDITAPQSCEIN
                     NLQPVYFDFKEIPAADFSSVVGSAVTTHKITKTVTIECENLGILNTDDISTSFYATEP
                     NTDNSMVVTSNSNVGIKIYDKNNKEIKVNGGELPTDMGKSTVYGEKSGSVTFSAAPAS
                     LTGARPAPGQFTATATITVEIVR"
     gene            complement(6661..>8583)
                     /locus_tag="JNZ57_003235"
     CDS             complement(6661..>8583)
                     /locus_tag="JNZ57_003235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HAY8829341.1"
                     /translation="IGPWRLRNYSTLNTSDGRAEYNSISTWIQRDIAALRSQIMIGDT
                     WTASDIFDSTQIRGARLYTDNDMLPASQNGFAPVVRGIAKSNATVIIRQNGYVIYQSA
                     VPEGAFEITDLNTASTGGDLDVTIKEEDGSEQRFTQPYASLAILKREGQTDVDVSVGE
                     LRDEDGFTPDVLQAQILHGFSHGITLYGGMQAAENYGSAALGVGKDLGALGAISFDVT
                     HARANFSHDDTETGQSYRFLYSKRFDDTDTSLRLVGYRYSTEGYYTLNEWASRRNSPE
                     DFWETGNRRSRVEGTLTQSLGRDYGNLYLTLSRQQYWHTDDVERLMQFGYSSSWKRLS
                     WNVSWSYSNTARQGTGNNHASDNTSEQIYMLSLSVPLSGWWGNSYATYSVSQNDNSGS
                     SHQLGLSGTALERNNLSWNLMQSYNSHDDEVGGNMSLTYDGSYGTVNGSYNYSQNSQR
                     LNYGIRGGILAHSEGVTLSQELGETIALVKAPGAAGLEIDNMRGAATDWRGYTVKTQL
                     NPYDENRVAISDNYFSKSNIELDNTVVTMVPTRGAVVKAEFVTHVGYRVLFRVLNANG
                     KPVPFGAIAAIQDASLADSGIVGDRGELYLSGLPEKGQVTLSWGENASTKCIFNYSLS
                     TPESESGLIEQGVTCH"
BASE COUNT         2209 a         2208 c         1961 g         2205 t
ORIGIN      
        1 ccacttcatc tttcggtaac tgcacgccca accgtttatc aataatggtt aacgcttctt
       61 cccctagctg gaactctttc gggtaaagcc gctggatatc ccacagcaac gggttgggca
      121 gcaacacgtt ttgctgaaag cgtttaatcg caaactggca atggtcagtt agcgagatat
      181 aaatactgtc ctgtaatttt cccaagcgct cctgcgctaa agagataata cgatcacagg
      241 ttgccatcac ctcaagagga atatgactta agagttcgct taatcgcccg ttcagttcat
      301 gactgctcaa ggcatactct ttttctattc cacttgagtt aattctttcg ccagcgcgtt
      361 tttgaaagcc aattcctcgc cccatgacga ctttttcccg ctgttgatca tcaataacca
      421 ccacaacatt attgttgaga attttggtga tttgcatgtt catagcaagg acctttttta
      481 taaacaaaaa aaaccgactt caccagtatt ctctggttat gtcaggtttt gcctgcgaat
      541 gcagtaacaa tccagtcatt tattaatggt ttttataacg aacatccagg ttcggaaatt
      601 aatttaattg cgtgcagaga aaatagcaat gcgctattga taaaaatatg accatgctcg
      661 cagttattaa ctttgtgtaa ttttaggaat ttataaagtt atatataaca aatcccaata
      721 attaagttat tgggatttgt ctggtgaatt atttgtcgct atcttttccc gccagcagtt
      781 tatccagctc atcaccgcct acatgacgga aatcctgccc cttcacgtag tagaagataa
      841 actcacaaat attctggcag cggtcgccaa tacgttcgat agaacgcgcg cagaacagcg
      901 cagtaagtac gctcggaatg gtacgcgaat cttccatcat gtaggtcatc agttgacgaa
      961 caataccttc gtattcctga tcgacttttt tatcttcacg ataaatacgt accgcttcgt
     1021 caatgtccat ccgcgcgaac gcgtccagca cgtcgtgcag catctggatg gtatgacggc
     1081 ccagcgactc cagacttacc agcaacggct gatgctgctg ggagaatttc tccagcgcag
     1141 tacggcagat tttgtccgcc acgtcgccaa tacgctccag ctcggcaatg gttttactga
     1201 tcaccataac cagtcgcagg tcgctcgccg tcggctgacg tttggcgata atgcgcacgc
     1261 aggcttcatc gatcgccact tccatcatgt tgacgttctt gtcgccttcg atcacgcgct
     1321 tcgccagatc gctgtcctgg ttatgcatcg cggtgattgc atcagaaagc tgctgctcca
     1381 ccatgccgcc catggtcatc acctgcgtgc ggatactttc cagttcggcg ttgaactggc
     1441 cggaaatatg tttattaaga ttgagactgt ccataacgca ctcctgaatc aaccgtaacg
     1501 accggtgatg tagtcttctg tttgtttctt cgctggcttg gtgaacagat cgtccgtgtt
     1561 gctgaactca atcaattcgc ccaggtacat aaacgccgtg tggtcggaac aacgcgcagc
     1621 ctgctgcatg ttgtgggtga cgatcaccac ggtgtaatcc tgcttcagtt cggtgatcag
     1681 ctcttcaata cgcccggtag agatagggtc gagcgccgaa cacggttcgt cgagcagcag
     1741 cacttccggg cgaatggcga taccacgcgc aatacacaga cgctgttgct gaccaccaga
     1801 gagagagtaa ccgctctggt gcaatttatc tttggtttcg ttccacaatg cggctttggt
     1861 caatgcccac tgcacgcgct cgtccatgtc ggcacgggag agcttctcaa acagacgaac
     1921 gccaaaagcg atgttgtcgt agatggacat cggaaacggc gtcggtttct ggaacaccat
     1981 gcccactttc gcacgcagca gtgcgatatc ctgagagttg gtcaggatgt tgtcgccatc
     2041 aagcagaatt tcaccttccg cacgctgctc cgggtacagt tcaaacattt tgttgaaggt
     2101 acgcagcagc gtcgatttac cgcagccgga cggcccgata aacgccgtaa cctggttttt
     2161 agcgatatcc aggttgatgt ttttcagggc atggaatttg ccgtagtaga agttcaaatt
     2221 acgaacctga attttactcg gggcagtttc aaccatactc attgcaatct tttcctcatc
     2281 gtgcctgatg cacttcgcta atcaggctta ccgtaggccg gataaggcgt tcacgccgca
     2341 tccggcaaag tgttaaccgt gtttattctt cgcaaaaaca acgcgcgcta gaatgttcag
     2401 cagcagtacg cacagggtaa taatcaatac cccggcccag gccagttgtt gccattccgc
     2461 aaacgggctc atcgcaaact taaagatcgt caccggcagg ttggcgatcg gctgcatcat
     2521 gtccgtgctc cagaactggt tggagagcgc ggtaaacagc agcggcgcgg tttcaccagc
     2581 aatacgggca atcgccagca ggataccggt catgatcccg gacaccgacg ctttcagcgt
     2641 aatcgcagag atcatcttcc acttcggtgt acccagcgca taagccgctt cacgcaggct
     2701 gtccggcacc agtttcagca tgttctcggt ggtgcggata acaatcggca cctgcaacag
     2761 cgccagggca atcacgcccg cccagccaga gaagtgctcc atctgcgcca ccacgatggt
     2821 gtaaacaaac agaccaacca caatcgacgg cgcggagagc agaatgtcgt taatgaagcg
     2881 aatcacttct gccagccagg atttacgacc atattccgcc agataaatcc ccgccataat
     2941 gcccagcggc gtaccgaata ccgtggccca caaaattaac agcccgctac ccgccagggc
     3001 gttcgccaga ccaccacctt ccgtattggg cggcggcgtc atttcagtga acagcgccag
     3061 cgacataccg tcgataccgc gagtgatggt ggacattaaa atccagatca gccagaacag
     3121 gccgaaggcc atcgtcgcca tcgagagcgt cagcgcaata cggtttttga ggcggcgacg
     3181 cgcctgcatt ttgcggcgag attcagccag cgccgcagtg gtttggattt caaccatagc
     3241 cattagcgtg ccccctcatt cttagccagg cgcataatca taaacttcga tgcggcgagg
     3301 acgatgaagg taatcacaaa caggatcagg cccagttcca tcagtgcggc aacgtgcaga
     3361 ccggattccg cttccgcaaa ttcgttcgcc aacgcagagg tgatactatt gcccggcatg
     3421 tacagcgagg cgctgtcgag ctggtaggtg ttaccgatga taaaggtcac cgccatggtt
     3481 tcaccgagcg cgcggcccag ccccagcatg atgccgccga taacaccatt tttggtgaac
     3541 ggaagaacga tacgccagat aacttcccag gtggtgcagc caataccgta ggccgactct
     3601 ttcatcatca ccggggtttg ttcgaacaca tcacgcatta ccgccgcaat gtacggaata
     3661 atcatgatgg cgaggatcac gcctgccgcg aggataccga taccaaatgc ggggccagag
     3721 aacagcgcgc caacaatcgg gatattcgac atgatattgc cgaccggctc ctgaaagtaa
     3781 acggcgaaca gcggcgcaaa gataaacagg ccccacatgc cgtaaacgat acttggaatg
     3841 gctgccagca gctcaatggc gatacccagc gggcgtttca gccagccagg cgcaagctca
     3901 gtcaggaaca gggcgatacc gaaactcacc gggacggcga tcagcagcgc gataaacgaa
     3961 gtcaccaacg taccgtagat cggcaccagc gccccgtaga tatcgttcgg tgcatcccac
     4021 tctttggtcc ataggaaagc cagaccaaat ttctgaatgc tcggccagga ggagatgatc
     4081 agagagacaa taatgccacc caacatcaat agcacaatca gcgccgccag ttttaccagc
     4141 acgctgaaaa ttatgtcgcc ctttttaccc ggtgggttaa aagcaggctt ggttgcagcc
     4201 ataagttact cttcagttaa acgcgtttac aaagtcattt tgtaatgccg gatgcggcgt
     4261 aaaacaccgt acccggcctg gagttttatt agtacagcgg cttaccgcta ctgtctttaa
     4321 tattggtctt ccacgcagcg cgaacctgtt caactacact atccggcagg ctggcgtaat
     4381 ccaggtcgtt cgcctgttta gccccggttt tgtacgccca gtcgaagaat ttcagcactt
     4441 ctgtgccttg ttctggtttc ttctgatctt tgtggatcag aatgaacgtg gtagaggtaa
     4501 taggccatgc atcttcgcct ttctggttgg tcagatcctg agcgaaggtt ttgctccagt
     4561 ctgcaccttt tgctgcatta gcgaagtttt cttcggtcgg actaaccggt ttaccatcag
     4621 cggagatcag tttggtgtac gccaggttgt tctgcttcgc gtaagcatat tcaacataac
     4681 caattgcacc cggcagacgc tgaacgaacg cggcgatacc gtcgttacct ttaccgccca
     4741 aaccgatcgg ccattttacg gtagagccag taccaacgtt gtttttccac tcttcgttca
     4801 ctttcgccag gtagctggtg aagacgaagg aagtcccgga gccatctgcg cggcgtacta
     4861 cagcaatgtt ttgtgaaggc agtttcagac ccggattcag tttggcgatg gcttcatcat
     4921 cccacttctt gattttgccc aggtagatgt cgccgagggt tttaccatcc agcaccagtt
     4981 cgccagactt cagccctgga atgttaaccg ccagcaccac gccgccaatc acggtcggga
     5041 actggaacag accttcctga gccagttttt cgtcagacag cggcgcgtca gaggcaccaa
     5101 aatcaacggt attagcgata atctgtttta cgccaccgga agaaccgata ccctggtagt
     5161 taactttatt accggtttct ttctggtaag tgtcagccca tttggcatac accggcgcag
     5221 ggaaggttgc acctgcacct gtcaggcttg cttctgcaaa cacagagaaa gcgctcatcg
     5281 ataaggtcgc ggcgacaaca gttgcgacgg tggtacgcat aactttcata atgtctcctg
     5341 ggaggattca taaagcattg tttgttggct acgagaagca aaataggaca aacaggtgac
     5401 agttatatgt aaggaatatg acatttttat gacagaaagg aattaccaaa taacttactg
     5461 attttaaatg tgaagatgaa aatcccacat gtcatctttt tgtcatgatg catttaaaag
     5521 tgataaagaa atgggtgaga tgacaacgat gtgatgaaca atcgttgtca gacctattag
     5581 cgcacaatct caacagttat cgtcgctgtt gcagtaaatt gccccggggc tgggcgagct
     5641 ccagtaaggc tcgcaggagc agctgaaaaa gttacactac ctgatttttc accatacact
     5701 gttgatttac ccatgtctgt tggcaactca ccaccgttca ctttgatttc cttattattt
     5761 ttgtcgtaaa tttttatccc cacgttagag tttgaagtta cgaccattga attgtccgta
     5821 ttgggttcgg tagcataaaa agacgtactg atatcatcgg tattcagtat ccccaggttt
     5881 tcacactcaa tagtgaccgt tttagtaatt ttatgtgttg ttaccgcact tccaacaaca
     5941 gatgaaaaat ctgcagctgg tatttcttta aaatcaaaat aaactggctg taaattattt
     6001 atttcgcaac tttgcggagc tgtaatatcg ccccgaatat aaacatcagc catcggctgt
     6061 gagtaatcca ccggggtgtc acggctaatt gttccataca atgtcactat ctttgtttca
     6121 ggaataatca attttcctgc aaatgtcttc ttgatataaa aatatactat cgctttagcc
     6181 ccactagata tacttaaagg ttcaatgcgg ttgcaattgt actttgtatt accagacggg
     6241 ttgttagcat gatattcaaa aggtgcattc acatacccaa ccccaagaat atctatagca
     6301 atcccaacat caaggttcgg attaagatca taataattaa tattagagtg aaccccagca
     6361 taagttaatg cctggtttat ttttgacgta taatagatat aggggaattc tcctacgtta
     6421 ccagtatcac aatgacagcg tccaggatat gaggatccat tagttacagt ggtgttaaat
     6481 gtcgttccaa ccttattttc gttcgcggta ataagatatc ccgagaaatc aagcgtactg
     6541 tgaaatacgc cattatcagg ggtacagata cctttaggag ctgcaagtgc tacactactt
     6601 aacgagagca taaacacagc aaagcaccac tgtttgatat acttgttcat aaaaatcctt
     6661 ttaatgacat gtcacaccct gttcaattaa tccgctctca ctttctggtg tcgaaagtga
     6721 ataattgaag atgcattttg ttgaggcgtt ttctccccag gataacgtaa cctgtccttt
     6781 ttctggtaga ccagaaagat aaagttcgcc acggtcaccg acaattcctg aatctgccaa
     6841 acttgcatct tgtatcgcag caatggctcc aaaaggtacc ggtttaccat ttgcatttaa
     6901 cactctgaag agaacgcgat aacccacatg agtcacaaac tccgctttaa ccactgcacc
     6961 acgcgtggga accatcgtaa cgacggtatt atcaagttct atattcgact tcgagaaata
     7021 gttatcgctg attgctaccc gattttcatc ataagggttt agctgtgtct tgaccgtata
     7081 gccgcgccag tccgtcgcag caccgcgcat attatctatt tctaacccgg cggccccagg
     7141 tgctttaaca agagcaatag tttcacctaa ctcctgactt aacgttaccc cttcgctgtg
     7201 tgccagaatt ccccctctga taccataatt cagcctctgg gaattttggc tgtagttata
     7261 gctgccgttc accgtgccat aagagccatc ataggtcagg gacatattac cgccaacctc
     7321 atcatcatga ctgttatagg actgcattaa attccatgaa aggttatttc tttccagcgc
     7381 cgtaccgctg agtccgagtt gatgtgagct accggaatta tcgttttgcg aaacagaata
     7441 ggtggcgtaa ctattacccc accagcccga taaaggaaca gataaagaga gcatgtagat
     7501 ctgctcactg gtgttatcac tggcatggtt gttccccgtc ccctgtctgg cagtattgga
     7561 ataactccag gagacgttcc acgagagacg cttccagcta ctgctgtagc caaattgcat
     7621 taatcgttcg acatcatcgg tatgccagta ttgttgccgg cttaatgtca ggtataaatt
     7681 gccataatct ctccccaacg actgcgttag cgttccctcc acgcgactac gtcggttacc
     7741 tgtttcccaa aagtcttcag ggctgttgcg ccgcgatgcc cactcattga gggtatagta
     7801 gccctcggtg gagtaacgat agccaaccag gcgcaagcta gtgtctgtgt cgtcaaatcg
     7861 ttttgaatag agaaagcgat atgactgacc cgtttctgta tcatcatggc taaaattcgc
     7921 acgagcatgt gtcacatcga aagaaattgc gcccaaagcg ccaagatctt taccgacacc
     7981 cagagctgca gaaccataat tttcagcagc ctgcatacct ccatataaag tgatcccgtg
     8041 ggaaaaacca tgaagtattt gcgcctgaag gacgtccggt gtaaatccgt cttcatcgcg
     8101 caattcaccc acgctgacat caacatctgt ctgaccttca cgtttaagaa tcgccaatga
     8161 agcataaggt tgggtgaatc gttgttcgct accgtcttct tctttgatgg ttacgtccaa
     8221 atcgccacct gtactggcgg tgttgagatc ggtgatctca aaagcacctt ctggaacggc
     8281 agactgataa atcacgtagc cattctgccg aatgatgacg gtggcgttgg actttgcaat
     8341 cccacgaacc acaggagcaa agccattctg gctggcgggt agcatatcgt tatcagtata
     8401 caaacgcgcg ccgcgaattt gcgtactgtc gaaaatatcg ctcgccgtcc acgtatcacc
     8461 aatcataatc tggcttctta acgcggcaat atcgcgctgt atccaggtac taatggagtt
     8521 gtattccgca cggccatcgc tggtgtttaa agtactgtaa ttacgtagcc gccacggtcc
     8581 aat
//
LOCUS       DADMHC010000170         8516 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.173, whole genome shotgun sequence.
ACCESSION   DADMHC010000170 DADMHC010000000
VERSION     DADMHC010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8516)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8516)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8516
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.173"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..259
                     /gene="csgC"
                     /locus_tag="JNZ57_003236"
     CDS             <1..259
                     /gene="csgC"
                     /locus_tag="JNZ57_003236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706954.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="curli assembly protein CsgC"
                     /protein_id="HAY8829342.1"
                     /translation="TIIPEVTLTQSCLCRVQILSLREGGSGQSQTKQEKTLSLPANQP
                     IALTKLSLNISPEDRVKIVVTVSDGQALHLSQQWPPSSEKS"
     gene            380..691
                     /locus_tag="JNZ57_003237"
     CDS             380..691
                     /locus_tag="JNZ57_003237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HAY8829343.1"
                     /translation="MFRPFLNSLMLGSLFFPFIAIAGSTAQGGVIHFYGQIVEPACDV
                     STQSSPVEMNCPQNGSVPGKTYSSKALMSGNVKNAQVASVKVQYIDKQKKLAVMNIEY
                     N"
     gene            787..1320
                     /gene="ymdB"
                     /locus_tag="JNZ57_003238"
     CDS             787..1320
                     /gene="ymdB"
                     /locus_tag="JNZ57_003238"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyl-ADP-ribose deacetylase"
                     /protein_id="HAY8829344.1"
                     /translation="MKTRIHVVQGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGP
                     ALLDACLKVRQQQGDCPTGHAVITLAGDLHAKAVVHTVGPVWRGGEQNEDQLLQDAYL
                     NSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEFITRHALPEQVYFVCYD
                     EENAHLYERLLTQQGDE"
     gene            1262..2743
                     /locus_tag="JNZ57_003239"
     CDS             1262..2743
                     /locus_tag="JNZ57_003239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706957.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HAY8829345.1"
                     /translation="MMKKTPTSTKDSLPNKEMNDLPRLASAVLPLCSQHPGQCGLFPL
                     EKSLDAFAARYRLAEMAEHTLDVQYYIWQDDMSGRLLFSALLAAAKRGVRVRLLLDDN
                     NTPGLDDILRLLDRHPRIEVRLFNPFSFRLLRPLGYITDFSRLNRRMHNKSFTVDGVV
                     TLVGGRNIGDAYFGAGEEPLFSDLDVMAIGPVVEDVADDFARYWYCKSVSPLQQVLDV
                     PEGEMADRIELPASWHNDAMTHRYLRQMESSPFINHLVDGTLPLIWAKTRLLSDDPAK
                     GEGKAKRHSLLPQRLFDIMGSPSERIDIISSYFVPTRAGVAQLLRMVRKGVKIAILTN
                     SLAANDVAVVHAGYARWRKKLLRYGVELYELKPTREQSSTLHDRGITGNSGASLHAKT
                     FSIDGKTVFIGSFNFDPRSTLLNTEMGFVIESETLAQLIDKRFIQSQYDAAWQLRLDR
                     WGRINWVDRHAKKEMILKKEPATSFWKRVMVRLASILPVEWLL"
     gene            complement(2751..3908)
                     /gene="mdoC"
                     /locus_tag="JNZ57_003240"
     CDS             complement(2751..3908)
                     /gene="mdoC"
                     /locus_tag="JNZ57_003240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706958.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis protein MdoC"
                     /protein_id="HAY8829346.1"
                     /translation="MNPVPAQREYFLDSIRAWLMLLGIPFHISLIYSSHTWHVNSAEP
                     SLWLTLFNDFIHSFRMLVFFVISGYFSYMLFLRYPLKKWWKVRVERVGIPMLTAIPLL
                     TLPQFIMLQYVKGKAESWPGLSLYDKYNTLAWELISHLWFLLVLVVMTTLCVWIFKRI
                     RNNLENSDKTNKKFSMVKLSVIFLCLGIGYAVIRRTIFIVYPPILSNGMFNFIVMQTL
                     FYLPFFILGALAFIFPHLKALFTTPSRGCTLAAALAFVAYLLNQRYGSGDAWMYETES
                     VITMVLGLWMVNVVFSFGHRLLNFQSARVTYFVNASLFIYLVHHPLTLFFGAYITPHI
                     TSNWLGFLCGLIFVVGIAIILYEIHLRIPLLKFLFSGKPVVKRENDKAPAR"
     gene            4302..5837
                     /gene="mdoG"
                     /locus_tag="JNZ57_003241"
     CDS             4302..5837
                     /gene="mdoG"
                     /locus_tag="JNZ57_003241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis protein MdoG"
                     /protein_id="HAY8829347.1"
                     /translation="MMKMRWLSAAVMLTLYTSSSWAFSIDDVAKQAQSLAGKGYEAPK
                     SNLPSVFRDMKYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATA
                     VKRIKYSPDYFTFGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVI
                     GAGQVYGLSARGLAIDTALPSGEEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAY
                     KFVVMPGRDTVVDVQSKIYLRDKVGKLGVAPLTSMFLFGPNQPSPANNYRPELHDSNG
                     LSIHAGNGEWIWRPLNNPKHLAVSSFSMENPQGFGLLQRGRDFSRFEDLDDRYDLRPS
                     AWVTPKGEWGKGSVELVEIPTNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDED
                     KLHAPDNAWVQQTRRSTGDVKQSNLIRQPDGTIAFVVDFTGAEMKKLPEDTPVTAQTS
                     IGDNGEIVESTVRYNPVTKGWRLVMRVKVKDAKKTTEMRAALVNADQTLSETWSYQLP
                     ANE"
     gene            5830..8373
                     /gene="mdoH"
                     /locus_tag="JNZ57_003242"
     CDS             5830..8373
                     /gene="mdoH"
                     /locus_tag="JNZ57_003242"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis glucosyltransferase MdoH"
                     /protein_id="HAY8829348.1"
                     /translation="MNKTTEYIDAMPIAASEKAALPKSDIRAVHQALDAEHRTWARED
                     DSPQGSVKARLEQAWPDSLADGQLIKDDEGRDQLKAMPEAKRSSMFPDPWRTNPVGRF
                     WDRLRGRDVTPRYLARLTKEEQESEQKWRTVGTIRRYILLILTLAQTVVATWYMKTIL
                     PYQGWALINPMDMVGQDLWVSFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQ
                     LLIGRDKYSISASTVGDEPLNPEHRTALIMPICNEDVNRVFAGLRATWESVKATGNAK
                     HFDVYILSDSYNPDICVAEQKAWMELIAEVGGEGQIFYRRRRRRVKRKSGNIDDFCRR
                     WGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAGIIQSSPKASGMDTLYARCQQFA
                     TRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHCALAPLPGEGSFAGSILSHDF
                     VEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHP
                     VHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFLQPRQLFPVWPQWRPEL
                     AIALFASTMVLLFLPKLLSILLIWCKGTKEYGGFWRVTLSLLLEVLFSVLLAPVRMLF
                     HTVFVVSAFLGWEVVWNSPQRDDDSTSWGEAFKRHGSQLLLGLVWAVGMAWLDLRFLF
                     WLAPIVFSLILSPFVSVISSRATVGLRTKRWKLFLIPEEYSPPQVLVDTDRFLEMNRQ
                     RSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDRHVEQALNETPEKLNRDRR
                     LVLLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALRKPDAASQ"
BASE COUNT         2153 a         2017 c         2219 g         2127 t
ORIGIN      
        1 taccattatt cctgaagtca ctcttactca atcttgtctg tgcagagtac aaatattgtc
       61 cctgcgcgaa ggcggttcag ggcaaagtca gacgaagcaa gaaaagaccc tctcattgcc
      121 tgctaatcaa cctattgctt tgacgaagtt gagtttaaat atttccccgg aagatcgggt
      181 gaaaatagtt gttactgttt ctgatggaca ggcacttcat ttatcacaac aatggccgcc
      241 ctcttcagaa aagtcttaat ttgttgaaat gtcgagcata agatgaatct ggagagaatg
      301 gtctgctgcg aatcagccaa cctgaaagta tggataacac aaccctcaag gatgactaat
      361 cattgaggaa atagaataaa tgttcagacc ttttttaaac tctcttatgc tcggcagttt
      421 gttttttcct tttattgcca tcgcaggaag caccgcgcaa gggggcgtga tccattttta
      481 tggccaaatt gtggaaccgg catgtgacgt cagcacccag tcatcacccg tagaaatgaa
      541 ctgcccacag aatggttctg ttccgggaaa aacctattcc agcaaagcgt taatgagcgg
      601 caatgtcaaa aacgcgcaag tagcctcagt aaaagtgcag tatattgata aacagaaaaa
      661 gctggctgta atgaacatcg aatataacta agtttctgaa caacgcacgt tgctgagtag
      721 aaaaatgcga tttaaccaaa aaacctgctg tacacttaag aaacaagaag gtgttaagga
      781 ggcgttatga aaacgcgtat tcatgttgtg cagggtgata ttaccaaact ggccgttgat
      841 gtgattgtga atgcggctaa tccgtcatta atgggaggcg gcggcgtcga tggggccatt
      901 catcgcgcag cgggtccggc cctgctggat gcctgtttaa aagtcaggca acagcagggc
      961 gattgcccta cggggcatgc cgttattacg cttgcaggcg atcttcacgc taaagccgta
     1021 gtacacaccg tcgggccagt ctggcgtggt ggtgaacaaa acgaagacca gcttttgcag
     1081 gatgcctatc tcaatagtct gcgactggtg gcggcaaaca gctatacgtc agtggcattt
     1141 cctgcaatca gtactggggt ttatggttac cctcgtgcgg cagcggctga aatcgcagta
     1201 aaaaccgttt cagaatttat tacccgtcac gctttacccg aacaggtata ctttgtctgt
     1261 tatgatgaag aaaacgccca cctctacgaa agactcctta cccaacaagg agatgaatga
     1321 tttgccccgg ctggcgagcg cggtgctgcc actgtgttcg caacatcccg gtcagtgtgg
     1381 tcttttccct ctggagaaaa gtctggatgc gtttgccgcc cggtatcgtc tggccgaaat
     1441 ggcagagcat acgctggatg ttcagtatta catctggcag gacgatatgt cgggtcggtt
     1501 actgttttcc gccctgttag ccgcagcaaa gcgtggcgtt cgcgtccgtt tgttgctgga
     1561 cgacaacaat acgcccggac ttgacgatat tttacgcttg cttgacagac atccccgcat
     1621 tgaagtccgg ctttttaatc ctttctcgtt tcgcttgctg cgtccgcttg gttatatcac
     1681 tgacttttcc cgtctcaatc gccgtatgca caataaaagt ttcactgtcg atggcgtggt
     1741 taccttggtg ggaggacgaa atattggtga tgcctatttt ggggcagggg aagagccact
     1801 tttttcggat ttagatgtta tggcaatagg acccgtggta gaggacgttg ccgatgattt
     1861 cgcccgctac tggtattgca aatcggtttc acccttacag caggtgctgg atgtcccgga
     1921 aggtgaaatg gcggatcgca tcgagttacc cgcctcctgg cataacgatg ccatgacgca
     1981 tcgttactta cgccaaatgg aatccagtcc gtttataaat catctggttg atggaacgtt
     2041 gccgcttatc tgggcgaaaa cacgtttatt aagtgatgat ccggcgaaag gggagggcaa
     2101 ggcaaaacgg cattcactgt taccgcagcg cctgttcgat atcatgggct cacccagtga
     2161 acgcatcgat attatctctt cctattttgt accgacacgc gcaggtgtgg cgcaactctt
     2221 acggatggtg agaaaagggg taaagattgc gatcctaacc aattctcttg ccgctaacga
     2281 tgttgctgtc gtccatgccg gatacgcgcg ctggcgcaaa aaattgctcc gctatggcgt
     2341 ggaattatat gaactcaagc cgacgcgtga acaaagtagt acgttacacg atcgcggcat
     2401 aaccggtaat tccggtgcca gcctgcatgc taaaaccttt agcatcgatg gtaaaacggt
     2461 gtttatcggc tctttcaatt tcgatccacg ttcgacattg ctcaatactg aaatgggctt
     2521 cgtgatagag agcgaaacgc tggcacagtt aattgataaa cgctttatac agagccagta
     2581 tgatgcggcc tggcagctcc gtctggacag gtggggacgg atcaactggg ttgatcgtca
     2641 tgcaaagaaa gagatgattc tcaaaaaaga acccgccacc agtttctgga agcgggttat
     2701 ggtcagactg gcgtcgatat tgcccgtgga atggttattg taaatgtggc ttaacgggct
     2761 ggtgctttat cgttctcacg cttaacaacc ggtttaccag aaaacaaaaa cttcagtaac
     2821 gggatgcgta aatgaatttc atacagaatt atcgcaatcc ctactacgaa tatcaggcca
     2881 cagagaaaac caagccagtt ggaggtgatg tgcggtgtaa tgtatgcgcc gaaaaacagc
     2941 gttaacgggt ggtgaaccag atagataaat agcgatgcgt taacaaagta agtcacccgc
     3001 gctgactgga agttaagcaa acggtggcca aaggagaaga ccacattcac catccacaga
     3061 ccgaggacca tggtgatcac cgactcggtt tcgtacatcc aggcatcgcc actgccatag
     3121 cgttggttga gtaaataagc gacaaatgcc aatgctgctg caagggtaca gccacgagac
     3181 ggcgtggtaa acaaggcttt aagatgaggg aaaatgaaag ccagtgcacc gaggataaag
     3241 aacggcaaat aaaatagcgt ttgcatgaca ataaaattga acatgccatt actcagaatg
     3301 ggcggataca caataaaaat cgttcttctt attaccgcat agccgatgcc gaggcataaa
     3361 aaaatcaccg atagttttac catcgagaat tttttattcg ttttatcaga attttctaaa
     3421 ttatttctga tgcgtttaaa tatccatacg cacagcgtcg tcatgactac taacaccagt
     3481 aaaaaccaca ggtgtgatat taattcccag gccaacgtat tatatttgtc atacaatgac
     3541 agcccaggcc aactttccgc tttccctttg acgtattgca gcataataaa ttgcggcaat
     3601 gtcagtaagg ggatggctgt taacatcggg atacctacac gttcgacacg tactttccac
     3661 cattttttca agggatagcg taaaaaaagc atgtaggaaa agtagccgga tataacgaaa
     3721 aataccagca tgcggaacga gtggatgaag tcattaaaaa gggtcagcca caatgacggt
     3781 tcggcgctat tcacatgcca tgtatggctc gaatagatta aagaaatatg aaaagggatc
     3841 cctaacaaca tcagccaggc gcggatggag tcgaggaaat attcacgttg cgcgggtact
     3901 ggattcatat atggttaact aatctcggat ttttcgtctt atccctgtcg ggttatgcct
     3961 ttaggcttgt tgccatagcg acaccgacct gaccgcgcca ggcgcaggct tcaaggtttt
     4021 tatgcatagc atcatcgcta ccactaacca gaatggaagc gtctgtaaga cggttgataa
     4081 ataaaattgc tggcaaaccc tacacgaagt cgatgcttct gtctttagga gaagcacgga
     4141 aagtgaaaac ggttgcaatc aggtgcttaa tccatgagcc agcgtgctga acgataccgg
     4201 gattctgttg tcggaatggc tggttatcca ttaaaataga tcggatcgat ataagcacac
     4261 aaagggggaa gtgcttacta attatgaaac ataaactaca aatgatgaaa atgcgttggt
     4321 tgagtgctgc agtaatgtta accctgtata catcttcaag ctgggctttc agtattgatg
     4381 atgtcgcaaa gcaagctcaa tccttagccg ggaaaggcta tgaggcgccc aaaagcaact
     4441 tgccctccgt tttccgcgat atgaaatacg cggactatca gcagatccag tttaatcatg
     4501 acaaagcgta ctggaacaat ctgaagaccc cattcaaact cgagttctac catcagggta
     4561 tgtacttcga taccccggtc aaaataaatg aagtgactgc caccgcagtc aaacgaatca
     4621 aatacagccc ggattatttc actttcggcg atgttcagca tgacaaagac acggtaaaag
     4681 accttggttt tgccggtttt aaagtgcttt acccgatcaa cagcaaagat aaaaacgatg
     4741 aaatcgtcag catgctcggg gccagctatt tccgcgtgat tggtgcaggt caggtttatg
     4801 gcctttctgc ccgcggcctg gcaattgata ccgccttgcc atcgggtgaa gaatttccac
     4861 gcttcaaaga gttctggatc gagcgtccaa aaccgactga taaacgttta accatttatg
     4921 cattgcttga ctcgccgcgc gcgacaggtg cttacaaatt cgtggttatg ccagggcgtg
     4981 acacggttgt ggatgtgcag tcgaaaatct atctgcgcga taaagtcggc aaactggggg
     5041 ttgcaccgtt aaccagtatg ttcctgtttg ggccgaacca accgtcgcct gcaaataact
     5101 atcgtccgga gttgcacgac tctaacggtc tctctatcca tgccggtaat ggcgaatgga
     5161 tctggcgtcc gttgaataac ccgaaacatt tagcggttag cagcttctcg atggagaacc
     5221 cgcaaggctt cggtctgttg cagcgcggtc gtgatttctc ccgctttgaa gatctcgatg
     5281 atcgttacga tcttcgtcca agcgcatggg tgactccgaa aggggagtgg ggtaaaggca
     5341 gcgttgagct ggtggaaatt ccaaccaacg atgaaaccaa cgataacatc gtcgcttact
     5401 ggacgccgga tcagctgccg gagccgggta aagagatgaa ctttaaatac accatcacct
     5461 tcagccgtga tgaagacaaa ctgcatgcgc cagataacgc atgggtgcaa caaacgcgtc
     5521 gttcaacggg ggatgtgaag cagtcgaacc tgattcgcca gcctgacggt actatcgcct
     5581 ttgtggtcga ttttaccggc gcagagatga aaaaactgcc agaggatacc ccggtcacag
     5641 cgcaaaccag cattggtgat aatggtgaga tagttgaaag cacggtgcgc tataacccgg
     5701 ttaccaaagg ctggcgtctg gtgatgcgtg tgaaagtgaa agatgccaag aaaaccactg
     5761 aaatgcgtgc tgcgctggtg aatgccgatc agacgttgag tgaaacctgg agctaccagt
     5821 tacctgccaa tgaataagac aactgagtac attgacgcaa tgcccatcgc cgcaagcgag
     5881 aaagcggcat tgccgaagag tgatatccgc gccgtacatc aggcgctgga tgccgaacac
     5941 cgcacctggg cgcgggagga tgattccccg caaggctcgg taaaggcccg tctggaacaa
     6001 gcctggccag attcacttgc tgatggacag ttaattaaag acgacgaagg gcgcgatcag
     6061 ctgaaggcga tgccagaagc aaaacgctcc tcgatgtttc ccgacccgtg gcgtaccaac
     6121 ccggtaggcc gtttctggga tcgcctgcgt ggacgcgatg tcacgccgcg ctatctggct
     6181 cgtttgacca aagaagagca ggagagcgag caaaagtggc gtaccgtcgg taccatccgc
     6241 cgttacattc tgttgatcct gacgctcgcg caaactgtcg tcgcgacctg gtatatgaag
     6301 accattcttc cttatcaggg ttgggcgctg attaatccta tggatatggt tggtcaggat
     6361 ttgtgggttt cctttatgca gcttctgcct tatatgctgc aaaccggtat cctgatcctc
     6421 tttgcggtac tgttctgttg ggtgtccgcc ggattctgga cggcgttaat gggcttcctg
     6481 caactgctta ttggtcgcga taaatacagt atatctgcgt caacagttgg cgatgaacca
     6541 ttaaacccgg agcatcgcac ggcgttgatc atgcctatct gtaacgaaga cgtgaaccgt
     6601 gtttttgctg gcctgcgtgc aacgtgggaa tcagtaaaag ccaccgggaa tgccaaacac
     6661 tttgatgtct acattcttag tgacagttat aacccggata tctgcgtcgc agagcaaaaa
     6721 gcctggatgg agcttatcgc tgaagtcggt ggcgaaggtc agattttcta tcgccgccgc
     6781 cgtcgccgcg tgaagcgtaa aagcggtaat atcgatgact tctgccgtcg ctggggcagc
     6841 cagtacagct acatggtggt gctggatgct gactcggtaa tgaccggtga ttgtttgtgc
     6901 gggctggtgc gcctgatgga agccaacccg aacgccggga tcattcagtc gtcgccgaaa
     6961 gcgtccggta tggatacgct gtatgcgcgc tgtcagcagt tcgcgacccg cgtgtatggg
     7021 ccactattta cagccggttt gcacttctgg caacttggcg agtcgcacta ctggggacat
     7081 aacgcgatta tccgcgtgaa accgtttatc gagcactgcg cactggctcc gctgccgggc
     7141 gaaggttcct ttgccggttc aatcctgtca catgactttg tagaagcggc gttgatgcgc
     7201 cgtgcaggtt ggggggtctg gattgcttac gatctcccgg gttcttatga agaattaccg
     7261 cctaacttgc ttgatgagct aaaacgtgac cgccgctggt gccacggtaa cctgatgaac
     7321 ttccgtctgt tcctggtgaa gggtatgcac ccggttcacc gtgcggtgtt cctgacgggc
     7381 gtgatgtctt atctctccgc tccgctgtgg tttatgttcc tcgcgctctc tactgcattg
     7441 caggtagtac atgcgttgac cgaaccgcaa tacttcctgc aaccacggca gttgttcccg
     7501 gtgtggccgc agtggcgtcc tgagctggcg attgcacttt ttgcttcgac tatggtgctg
     7561 ttgttcctgc cgaagttatt gagcattttg cttatctggt gcaaaggaac gaaagaatac
     7621 ggcggcttct ggcgcgttac attatcgttg ctactggaag tgcttttttc cgtgctgctg
     7681 gctccggtac gcatgctgtt ccatacggtc ttcgttgtca gcgcgttcct tggctgggaa
     7741 gtggtgtgga attcaccgca gcgtgatgat gactccactt cctggggtga agcgttcaaa
     7801 cgccacggct cacagctgct gttagggtta gtgtgggctg ttgggatggc gtggctggat
     7861 ctgcgtttcc tgttctggct ggcaccgatt gtcttctcgt tgatcctgtc accgtttgtt
     7921 tcggtgattt ccagccgtgc caccgttggt ctgcgaacca aacgctggaa actgttcctg
     7981 atcccggaag agtattcacc gccgcaggtg ctggttgata ccgatcgctt ccttgagatg
     8041 aatcgtcaac gctcccttga tgatggtttt atgcacgcgg tgtttaaccc gtcatttaac
     8101 gctctggcaa ccgcaatggc gaccgcgcgt caccgcgcca gtaaggtgct ggaaatcgcc
     8161 cgtgaccgcc acgttgaaca ggcgcttaac gagacgccag agaagctgaa tcgcgatcgt
     8221 cgcctggtgc tgctaagcga tccggtgacg atggcccgtc tgcatttccg tgtctggaat
     8281 tccccggaga gatattcttc atgggtgagt tattacgaag ggataaagct caatccactg
     8341 gcattgcgta aaccggatgc ggcttcgcaa taaaaacgta gttgcctgat gcgctacgct
     8401 tatcaggccc acatcgttcc tgcaatttat tgattttgca agattttgta ggttgggtaa
     8461 ggcgttcacg ccgcatccgg caaaaacaac gagccaataa aaataccggc gttatg
//
LOCUS       DADMHC010000171         8505 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.174, whole genome shotgun sequence.
ACCESSION   DADMHC010000171 DADMHC010000000
VERSION     DADMHC010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8505
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.174"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..540)
                     /locus_tag="JNZ57_003243"
     CDS             complement(<1..540)
                     /locus_tag="JNZ57_003243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418538.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1705 domain-containing protein"
                     /protein_id="HAY8829349.1"
                     /translation="MLKRLLKRPSLNLLAWLLLAAFYISICLNIAFFKQVLQALPLDS
                     LHNVLVFLSMPVVAFSVINIVLTLSSFLWLNRPLACLFILVGAAAQYFIMTYGIVIDR
                     SMIANIIDTTPAESYALMTPQMLLTLGFSGVLAALIACWIKIKPATSRLRSVLFRGAN
                     ILVSVLLILLVAALFYKDYA"
     gene            complement(644..1981)
                     /gene="adiC"
                     /locus_tag="JNZ57_003244"
     CDS             complement(644..1981)
                     /gene="adiC"
                     /locus_tag="JNZ57_003244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine/agmatine antiporter"
                     /protein_id="HAY8829350.1"
                     /translation="MSSDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIY
                     GWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNI
                     AMVVIGVGYLSYFFTILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALI
                     PIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVK
                     NPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGA
                     IVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILM
                     TIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTT
                     IAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDAPISKD"
     gene            complement(2118..2879)
                     /locus_tag="JNZ57_003245"
     CDS             complement(2118..2879)
                     /locus_tag="JNZ57_003245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HAY8829351.1"
                     /translation="MRICSDQPCIVLLTEKDVWIRVNGKEPISLKANHMALLNCENNI
                     IDVSSLNNTLVAHISHDIIKDYLRFLNKDLSQIPVWQRSATPILTLPCLTPDVFRVAA
                     QHSMMPAETESEKERTRALLFTVLSRFLDSKKFLSLMMYMLRNCVSDSVYQIIESDIH
                     KDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYAVNELMMDGKNISQVSQ
                     SCGYNSTSYFISVFKDFYGMTPLHYVSQHRERTVA"
     gene            complement(3204..5471)
                     /gene="adiA"
                     /locus_tag="JNZ57_003246"
     CDS             complement(3204..5471)
                     /gene="adiA"
                     /locus_tag="JNZ57_003246"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418541.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine decarboxylase"
                     /protein_id="HAY8829352.1"
                     /translation="MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDG
                     FAILSSNEAIDCLMFSYQMEHPDEHQNVRQLIGKLHERQQNVPVFLLGDREKALAAMD
                     RDLLELVDEFAWILEDTTDFIAGRAVAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAP
                     GHQGGVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVF
                     GADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSR
                     NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQ
                     DLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPSDHNGPTVFATHSTHKLLNALS
                     QASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEV
                     IDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQD
                     YWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRH
                     GIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYDANTPLAQVMPELVEQYPD
                     TYANMGIHDLGDTMFAWLKENNPGARLNEAYSGLPVAEITPREAYNAIVDNNVELVSI
                     ENLPGRIAANSVIPYPPGIPMLLSGENFGDKNSPQVSYLRSLQSWDHHFPGFEHETEG
                     TEIIDGIYHVMCVKA"
     gene            complement(5670..6578)
                     /gene="melR"
                     /locus_tag="JNZ57_003247"
     CDS             complement(5670..6578)
                     /gene="melR"
                     /locus_tag="JNZ57_003247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator MelR"
                     /protein_id="HAY8829353.1"
                     /translation="MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWH
                     GQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHL
                     FLSWPLDKDLINHVTHGMMIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM
                     LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVK
                     LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS
                     TFGKYVGMSPQQYRKLSQQRRQTFPG"
     gene            6861..8216
                     /gene="melA"
                     /locus_tag="JNZ57_003248"
     CDS             6861..8216
                     /gene="melA"
                     /locus_tag="JNZ57_003248"
                     /EC_number="3.2.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-galactosidase"
                     /protein_id="HAY8829354.1"
                     /translation="MMTAPKITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDPT
                     RLEESHIVVRKLMDSAGASGKITCHTQQKEALQDADFVVVAFQIGGYEPCTVTDFEVC
                     KRHGLEQTIADTLGPGGIMRALRTIPHLWQICEDMTEVCPDATLLNYVNPMAMNTWAM
                     YARYPHIKQVGLCHSVQGTAEELARDLNIDPSTLRYRCAGINHMAFYLELERKTADGS
                     YVNLYPELLAAYEAGQAPKPHIHGNTRCQNIVRYEMFKKLGYFVTESSEHFAEYTPWF
                     IKPGREDLIERYKVPLDEYPKRCVEQLANWHKELEEYKNASRIDIKPSREYASTIMNA
                     IWTGEPSVIYGNVRNDGLIDNLPQGCCVEVACLVDANGIQPTKVGTLPSHLAALMQTN
                     INVQTLLTEAILTENRDRVYHAAMMDPHTAAVLGIDEIYALVDDLIAAHGDWLPGWLH
                     R"
     gene            8319..>8505
                     /locus_tag="JNZ57_003249"
     CDS             8319..>8505
                     /locus_tag="JNZ57_003249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418544.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="melibiose:sodium transporter MelB"
                     /protein_id="HAY8829355.1"
                     /translation="MSISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLV
                     GTLFLVARIWDAINDPIM"
BASE COUNT         2178 a         2008 c         2203 g         2116 t
ORIGIN      
        1 ggcgtagtct ttataaaaca gtgcggcgac cagcaaaatc agtagtacag aaaccagaat
       61 attggctcca cggaaaagaa cactgcgcag acgcgaggtg gcaggtttga tttttatcca
      121 gcaggcaatc agcgcagcaa gcacgccgct gaatcccagc gttaataaca tttgcggtgt
      181 catcagcgca taactttctg ccggagtggt atcaataata ttggcaatca tcgagcggtc
      241 gatgacgatg ccgtaagtca ttatgaaata ttgtgcagcc gcgccaacca gaataaacag
      301 gcaggccagt ggtcgattaa gccataagaa agagcttagt gtcaggacaa tattaatcac
      361 gctgaaagcg acgaccggca tcgacaagaa aaccagtacg ttatgcagcg aatccagcgg
      421 cagcgcctgc aacacctgtt taaaaaaggc aatattcagg cagatagaga tataaaaagc
      481 ggccaacaat agccaggcga gtaaattcaa agagggtctt tttagtaggc gcttcaacat
      541 cacggtgttt ccatcgaaca aagtgcgcat atgctcgcaa agcaaaatta agccaacctt
      601 aagttcttaa ggttggcttt tatgtttgct ggattaaggg gaattaatct ttgcttattg
      661 gtgcatctaa gggatacggg tttttatgta gccggttgta attcagcgca tacatggcgg
      721 tgatgaccat cagggtgaca aatgaccaca taacctcttt cgctccggac cccaccacgg
      781 cccagatgca gtagaggaag gcaatggtag taactgccag atatgccggg cgtgctttac
      841 caaagtgacc gtgtccgagc agcagtaacg ccgcacaggt gtaaagatat ggcaccagtg
      901 taaagatgac cgagacggaa gaaaccagac cgaactcttt ggtcgcgttt ggtgaaatgc
      961 tgctgagctg gaagatggtc atcaaaatac cgacgataat cagccccgcc actggcgtac
     1021 ccgctttatt tacacgggca aaaatcggtg ggaacagtcc gtcatcggca gcggctttcg
     1081 ccgtttgacc cgccagcaac gtccagccgc ccagtgaacc taagcaaccc gcagctgcgc
     1141 agaaggaaac aatggccccg gcggtgtcac ccaacgccat ccgtgcggca tcaccgaatg
     1201 gcgaagcaga aacgcgcagt gcggcattag ggatcatccc cataatcgcg gtggtagaaa
     1261 gtacatagca aacggcggca atcaataccc caccaatggt ggcgataggg acattgcgtt
     1321 tcgggttttt caccacacct gcggcaacgg aggcactttc cacaccgatg aacgaccaca
     1381 gcgtaacgtt aagggtactt tgaattgcac cgaaggtgcc caggccgctg acgttccatg
     1441 ccgccatata ggtttcacca cggaaccaga accagccaaa tacggcaatc ccgacgatgg
     1501 ggatcagcgc cagcacggtg gcaactgcct gcacacgggt gatcattttc ggaccgacaa
     1561 tgttcagcag gacgaagatc cacagcacca cgacgcaggt gatggttaat accaatggat
     1621 ctttcagaat cgtgaagaag taacttaaat atcctacgcc aatgaccacc atggcgatat
     1681 tgccgatcca gcaggccagc cagtagagga cgttggtttg ataaccgaga aacgggccaa
     1741 agcagcggcg ggcgtaagcg taagaaccac caggacttgg gtcgaggaac gacattttgg
     1801 cgtataccat cgagagcccc agtgcaccga taatcgtcac caaccatcca taaatggcaa
     1861 tcccgccagt ggaggccagg tttgcaggta acagaaaaac acctgacccc ataatattcc
     1921 ccgacaccat cagggtgacg gggattaagc ccactttgtg agcatcagca tccgaagaca
     1981 taattaaact cctgcgaagg cgagcttcgt gacaataaat tacgtcatat catacgcctg
     2041 cattcgatag ttgaattatt atcgaccggg ttatcgctga tgccgttatt aatatagctc
     2101 ttcgttaagg ttaaaaatca ggcgacagtg cgttctctgt gctgactaac ataatgcagc
     2161 ggcgtcatac cgtagaagtc tttaaagaca gaaataaagt acgacgtact gttgtagccg
     2221 caggactgtg atacctgaga gatattttta ccgtccatca ttaattcatt tacggcataa
     2281 cgcatgcggc aggtggtgat tatttggcta taactggtgt tttcgctttt cagctttttc
     2341 tttaacagac ttgggctaag acataaacaa ctggctacca tactaagatt ccagtctttg
     2401 tgaatatcgc tttcaataat ttgataaacg ctgtcactta cacaattacg taacatatac
     2461 atcattaatg aaaggaattt tttactgtcg agaaaacggg atagcaccgt gaataataat
     2521 gcgcgtgttc gttccttttc tgactcagtt tctgcgggca tcatgctgtg ttgcgcggca
     2581 acgcgaaaga cgtctggcgt caggcatggc agggtgagta tgggcgtagc gctacgttgc
     2641 catactggta tttgcgagag atctttattc agaaaccgga ggtaatcttt gatgatgtcg
     2701 tgactaatat gagcaaccaa agtgttgtta agagaggaga cgtcgataat attattttca
     2761 caatttaata acgccatatg gttagcttta aggctaatag gttctttccc attcaccctt
     2821 atccagacat ctttttcagt caataaaaca atacaaggtt ggtcgctgca aatcctcata
     2881 catgtactcc tgagtgcgaa taaaagacca gttctcgcta aagcaaagcg ataccgggaa
     2941 atggttatat aattgtatga cgaatataaa catacataaa aataacgagt tttactaata
     3001 ttacaaattt ttatagtaat ttctcatgta catatttttt tacagggtaa ataacaggca
     3061 aaaaaaagcg cggggtgggg ccgcgcaaaa agtatgacat ttttgtttgc agcaattttt
     3121 atgaaaacgt tgccatactc aaaaggccta aggccaggcg gcgtaatgtt atttaaacaa
     3181 ttacgccttc agcggaatag tggttacgct ttcacacaca taacgtggta aataccgtca
     3241 ataatttcag tcccttcagt ttcgtgttca aatccaggga aatggtggtc ccaggattgc
     3301 agcgagcgta aataacttac ttgcggactg tttttatcgc cgaagttttc accagacagc
     3361 agcatcggga ttcctggcgg atatgggata actgagtttg ccgcgatgcg tcctggcaga
     3421 ttttcaatgg ataccaattc gacattgttg tcgacaatcg cgttgtacgc ttcacgcggg
     3481 gtgatttccg ccaccggcag gccggaatag gcttcgttca accgtgcgcc agggttgttt
     3541 tctttcagcc aggcaaacat ggtgtcaccc agatcgtgaa tccccatgtt cgcgtaagtg
     3601 tcaggatatt gttcaacaag ttccggcatc acctgcgcca gcggtgtgtt ggcgtcatag
     3661 tggcgtttga aggagcaaag ggtgttaacc agagtccccc atttcccacg ggttacgccc
     3721 atagagaaca ggaacataat ttggaagtca gtggtgcggg taggcacaat gccgtggcga
     3781 ccaagccagg cagtgaccag cgccgccgga acaccggttt cttccagttc accatcttca
     3841 cccattcccg gagcaaggat gctgacttta atcgggtcga gcatactcca gttatccgga
     3901 atatctttga agccgtgcca gctttcgccc ggatgcatta cccagtagtc ctgaacggtg
     3961 gtcagcagtt tggttggtgc gtcagcaaag tcataggttt tgccggtttg tgggtcggtg
     4021 acgacttctt tgttccacgg tttgaagaac cagctaccgt cagcggtgaa ctctttatac
     4081 agccgcgcca tcgcctgacg gaaatcaacc gcttcgtcga tcacttcctg cgtcagtgac
     4141 aggccgctgt tgccgtccat catcgacacc gccacgtcgt tggatgcgca gatggcatac
     4201 agcggggagg tggtggcatg catcatgtag gcctggttga agcgggagaa gttaatcgcc
     4261 ccacgacctt cacgtacatg aatataagaa gcctgtgaaa gcgcattcag cagtttgtgg
     4321 gtggagtggg tggcgaaaac ggtaggaccg ttgtgatcgc taggttcgcc gcgcatggca
     4381 tagtgatcgg catagatcgg gttgaaacgt gcatagccgt accaggcttc gtcaaagtgc
     4441 agacgatcgg aggttttttc cagcagatcc tgcgcttctt tagcgttata acacacgccg
     4501 tcataggtgc agttggtcac cacgcagtaa gacggttttt gcccggcttt gtctttagtc
     4561 agcgggcttt cactgatttt cttctgcaag gtttcaggtt gcatttcctg cggatagatt
     4621 ggcccgataa tgccgtagcg gttgcggctt ggcaccatgt agaccggttt cgcgcctgtc
     4681 agcatcaagc cttgttcgat ggatttatgg cagttacggt caacgaccac gacatcgtta
     4741 tcggtcatgc aagcctgcat gatggtgcgg ttagagccgg aagtaccgac gactaccgac
     4801 caggagcgat cggcaccaaa tacgcgtgcg gcatattttt cgctttcgcc aaatgcgcca
     4861 gtatggtcaa gcaaagaacc gagggaagtt cgttcgatgc ccatatcggt gcggaacaga
     4921 ttttctccat agtagtcatg gtagaaacgt ccggcgggtg ttttggtaaa accaacgccg
     4981 ccctggtggc ctggcgctgc ccaggaatat tcatggatgt cgctatattt catcagcgcg
     5041 ctgaacagtg gcggcaacag ctgctggcgg tagcgggtca tagcggcaac ggcgcgtccg
     5101 gcgataaagt cggtggtatc ttccagaatc caggcgaatt catcgacaag ctccagcagg
     5161 tcgcgatcca ttgcggcgag ggctttttcc cgatcgccca acaggaagac cggcacgttt
     5221 tgttggcgct catgaagctt accgatcaat tgtctgacgt tttgatgttc gtccggatgt
     5281 tccatttgat agctgaacat caggcagtca atggcttcgt ttgaagagag aatggcaaaa
     5341 ccatcatcaa aggaggtgga tttaatcacg gtaacatttt gctggcttaa agcatctgcc
     5401 agacgctcaa cggcgttacc gacccaggtg tcttgatgga gaaactcgct ttcaacaatt
     5461 aatactttca tcattgctta cccggttatg aaggaatctt cgttgcgggc aagtatcttc
     5521 cggccttttc gggctgtaaa gcgcgtgaaa aacaaacatt tttgaaatat ttatttttat
     5581 aaacaatgcg ttatgtgatt attttaaatt attttcactg cttgttatcg acggctaaac
     5641 tatttttttg gctgatactg atatcgtctt tagccgggaa acgtctggcg gcgctgttgg
     5701 ctaagtttgc ggtattgttg cggcgacatg ccgacatatt tgccgaacgt gctgtaaaaa
     5761 cgactacttg aacgaaagcc tgccgtcagg gcaatatcga gaatactttt atcggtatcg
     5821 ctcagtaacg cgcgaacgtg gttgatgcgc atcgcggtaa tgtactgttt catcgtcaat
     5881 tgcatgaccc gctggaatat ccccattgca tagttggcgt taagtttgac gtgctcagcc
     5941 acatcgttga tggtcagcgc ctgatcatag ttttcggcaa taaagcccag catctggcta
     6001 acataaaatt gcgcatggcg cgagacgctg tttttgtgtg tgcgcgaggt tttattgacc
     6061 agaatcggtt cccagccaga gaggctaaat cgcttgagca tcaggccaat ttcatcaatg
     6121 gcgagctggc gaatttgctc gttcggactg tttaattcct gctgccagcg gcgcacttca
     6181 aacgggctaa gttgctgtgt ggccagtgat ttgatcatca tgccgtgagt gacgtggtta
     6241 atcaggtctt tatccagcgg ccaggagaga aacagatgca tcggcagatt aaaaatcgcc
     6301 atgctctgac aggttccggt atctgttagt tggtgcggtg tacaggccca gaacagcgtg
     6361 atatgaccct gattgatatt cactttttca ttgttgatca ggtattccac atcgccatcg
     6421 aaaggcacat tcacttcgac ctgaccatgc cagtggctag tgggcatgat atgcggtgcg
     6481 cgaaactcaa tctccatccg ctggtattcc gaatacagcg acagcgggct gcgggtctgt
     6541 ttttcgtcgc tgctgcacat aaacgtatct gtattcatgg atggctctct ttcctggaat
     6601 atcagaatta tggcaggagt gagggaggat gactgcgagt gggagctcgg ttttcaccct
     6661 cttcccagag aggcgagggg agcgtccgag catcatgagg ccgaaaactc tgcttttcag
     6721 gtaacttatt accataaact cagatttact gctgcttcac gcaggatctg agtttatggg
     6781 aatgctcaac ctggaagccg gaggttttct gcagattcgc ctgccatgat gaagttattc
     6841 aagcaagcca ggagatctgc atgatgactg cacccaaaat tacatttatc ggcgctggtt
     6901 cgacgatttt cgttaaaaat attcttggtg atgtgttcca tcgagaggcg ctgaaaacgg
     6961 cgcatattgc cctgatggac attgatccca cccgcctgga agagtcgcat attgtggtgc
     7021 gtaagctgat ggattcagca ggggccagcg gcaaaatcac ctgccacacc caacagaaag
     7081 aagccttaca ggatgccgat tttgtcgtgg tggcatttca gattggcggt tatgaacctt
     7141 gcacggtgac tgatttcgag gtctgtaagc ggcatggtct ggaacaaacc attgccgata
     7201 cgttggggcc gggcggtatt atgcgcgcgc tacgtaccat tccgcatctg tggcaaattt
     7261 gcgaggacat gacggaagtc tgccccgatg ccacattgct caactacgtt aacccaatgg
     7321 cgatgaatac ctgggcgatg tatgcccgct atccgcatat caaacaggta gggctgtgcc
     7381 attcggtgca gggaacggcg gaagagctgg cgcgtgacct caatatcgat ccgtccacgc
     7441 tgcgttaccg ttgcgctggt atcaaccata tggcgtttta cctggaactg gagcgtaaaa
     7501 ccgccgacgg cagttacgtg aatctctacc cggaactgct ggcggcttat gaagcagggc
     7561 aggcaccgaa gccacatatt catggtaata ctcgctgcca gaatattgtg cgctacgaaa
     7621 tgttcaaaaa gctgggctac ttcgtcacgg aatcgtcaga acattttgcc gaatatacgc
     7681 cgtggtttat taagccaggt cgtgaggatt tgattgagcg ttataaagta ccgctggatg
     7741 agtacccgaa acgctgcgtc gagcagctgg cgaactggca taaagagctg gaggagtata
     7801 aaaacgcctc ccggattgat attaaaccgt cacgggaata tgccagcaca atcatgaacg
     7861 ctatctggac tggcgagccg agtgtgattt acggcaacgt ccgtaacgat ggtttgattg
     7921 ataacctgcc acaaggatgt tgcgtggaag tagcctgtct ggttgatgct aatggcattc
     7981 agccgaccaa agtcggtacg ctaccttcgc atctggccgc cctgatgcaa accaacatca
     8041 acgtacagac gctgctgacc gaagctattc ttacggaaaa tcgcgaccgt gtttaccacg
     8101 ccgcgatgat ggacccgcat actgccgccg tgctgggcat tgacgaaata tatgctcttg
     8161 ttgacgacct gattgccgcc cacggcgact ggctgccagg ctggttgcac cgttaaaacg
     8221 cgactaaacg ctactgcgcc gggggattta ttccggcgca cacctctgac gataccaata
     8281 acagaaggcg ggcgttggta acagcgaccc gataccctat gagcatttca atgactacaa
     8341 aactcagtta tggatttgga gcgttcggga aggattttgc gatcggcatt gtgtatatgt
     8401 acctcatgta ttactacacc gatgtcgttg ggctgtctgt gggtttggtc ggtactttgt
     8461 ttctggtggc gaggatctgg gatgctatta acgatccgat tatgg
//
LOCUS       DADMHC010000172         8347 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.175, whole genome shotgun sequence.
ACCESSION   DADMHC010000172 DADMHC010000000
VERSION     DADMHC010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8347
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.175"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            194..448
                     /locus_tag="JNZ57_003250"
     CDS             194..448
                     /locus_tag="JNZ57_003250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829356.1"
                     /translation="MLKIIPGATGYFNKTLNSNQFDNEDAIKDKLDNRGSIKGKLNNI
                     YGKSIDYAALRHRDIIIAKIDLFIQRITHNLWHARKKMCF"
     gene            472..1179
                     /locus_tag="JNZ57_003251"
     CDS             472..1179
                     /locus_tag="JNZ57_003251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2713 family protein"
                     /protein_id="HAY8829357.1"
                     /translation="MWVNKYIDDCTDEDLNDRDFIASVVDRAIFHFAINSICNPGDNK
                     DATPIEQCTFDVETKNGLPSTVQLFYEESKDNEPLANIHFQAIGSGFLTFVNTCQEHD
                     DNSLKLFASLLISLSYSSAYADLSETVYINENNESYLKAQFEKLSQRDMKKYLGEMKR
                     LADGGEMNFDGYLDKMSHLVNEGTLDPDILSKMRDAAPQLISFAKSFDPTSKEEIKIL
                     TDTSKLIYDLFGVKSEK"
     gene            1542..2579
                     /gene="dusA"
                     /locus_tag="JNZ57_003252"
     CDS             1542..2579
                     /gene="dusA"
                     /locus_tag="JNZ57_003252"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HAY8829358.1"
                     /translation="MHGNSEMQKINQTSAMPEKTDVHWSGRFSVAPMLDWTDRHCRYF
                     LRLLSRNTLLYTEMVTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPAALAQCAKLAEA
                     RGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDD
                     QDSYEFLCDFINTVSGKGECGMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDF
                     PHLTMSINGGIKSLEEAKAHLQHMDGVMVGREAYQNPGILAAVDREIFGSSDTDAYPV
                     AVVRAMYPYIERELSQGTYLGHITRHMLGLFQGIPGARQWRRYLSENAHKAGADINVL
                     EHALKLVADKR"
     gene            2713..2955
                     /gene="pspG"
                     /locus_tag="JNZ57_003253"
     CDS             2713..2955
                     /gene="pspG"
                     /locus_tag="JNZ57_003253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313059.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response protein PspG"
                     /protein_id="HAY8829359.1"
                     /translation="MLELLFVIGFFVMLMVTDVSLLGIITALVVATAIMFLGGMLALM
                     IKLLPWLLLAIAVVWVIKAIKAPKVPKYQRYDRWRY"
     gene            complement(3120..4103)
                     /locus_tag="JNZ57_003254"
     CDS             complement(3120..4103)
                     /locus_tag="JNZ57_003254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HAY8829360.1"
                     /translation="MATRIKFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFID
                     TYIRSGLYPPPSLPSGSGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIN
                     ADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQW
                     AKALGAKLIGTVGTAQKAQSALKAGAWQVINYREENLVERLKEITGGKKVRVVYDSVG
                     RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREEL
                     TEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP"
     gene            4186..5601
                     /locus_tag="JNZ57_003255"
     CDS             4186..5601
                     /locus_tag="JNZ57_003255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase DnaB"
                     /protein_id="HAY8829361.1"
                     /translation="MAGNKPFNKQQAEPRERDPQVAGLKVPPHSIEAEQSVLGGLMLD
                     NERWDDVAERVVADDFYTRPHRHIFTEMARLQESGSPIDLITLAESLERQGQLDSVGG
                     FAYLAELSKNTPSAANISAYADIVRERAVVREMISVANEIAEAGFDPQGRTSEDLLDL
                     AESRVFKIAESRANKDEGPKNIADVLDATVARIEQLFQQPHDGVTGVNTGYDDLNKKT
                     AGLQPSDLIIVAARPSMGKTTFAMNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASL
                     SRVDQTKIRTGQLDDEDWARISGTMGILLEKRNIYIDDSSGLTPTEVRSRARRIAREH
                     GGIGLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELNVPVVALSQLNRSLEQR
                     ADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVR
                     LTFNGQWSRFDNYAGPQYDDE"
     gene            5654..6733
                     /gene="alr"
                     /locus_tag="JNZ57_003256"
     CDS             5654..6733
                     /gene="alr"
                     /locus_tag="JNZ57_003256"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HAY8829362.1"
                     /translation="MQAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLE
                     TARTLPDADAFGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNE
                     EQLAALEEASLDEPVTVWMKLDTGMHRLGVRPEQAGAFYHRLTQCKNVRQPVNIVSHF
                     ARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVS
                     PLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGD
                     GYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERI
                     AEMTKVSAYELITRLTSRVAMKYVD"
     gene            6986..8179
                     /gene="tyrB"
                     /locus_tag="JNZ57_003257"
     CDS             6986..8179
                     /gene="tyrB"
                     /locus_tag="JNZ57_003257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709866.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transaminase"
                     /protein_id="HAY8829363.1"
                     /translation="MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIP
                     QLKAVAEAEARLNAQPHGASLYLPMEGLNSYRHAIAPLLFGADHPVLQQQRVATIQTL
                     GGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNSVRF
                     NDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIKILKARELIPFLDIAYQGF
                     SAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVLCEDAEAAGRVLGQL
                     KATVRRNYSSPPNLGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVKVLSTEM
                     PERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKA
                     FAAVM"
BASE COUNT         2101 a         1933 c         2128 g         2185 t
ORIGIN      
        1 tgtcgtacca ttatcaacac gataataatt aataattcat ttttaaataa attgcttcaa
       61 gttaactcgc tatttattta actgggttta aacgcatacc tgtagttcag aaattatgag
      121 cgatttttga tagtgaccag atggcaaaag aattataagg aggacacggt acgacaaaaa
      181 aggtagatga atcatgttga agataatacc cggtgcaact ggatacttta ataaaacact
      241 caattcaaat caattcgata atgaagatgc aatcaaagat aaattagata atagaggttc
      301 aatcaaaggt aaattaaata atatatatgg taaatctatt gattatgcag cgctgcgtca
      361 tcgggatata attattgcaa aaatagattt gtttattcaa cgaatcacgc ataatttatg
      421 gcatgcacgt aaaaaaatgt gtttttaatt gagcaaataa atgatctcaa aatgtgggtc
      481 aataagtata ttgacgattg cactgatgag gatttaaacg atcgtgactt tattgcatca
      541 gttgttgacc gggctatttt tcatttcgcg attaatagta tatgtaatcc tggggataat
      601 aaagatgcga ctcccattga acaatgtact tttgatgtag aaactaagaa tggccttccc
      661 tccacggttc agctatttta tgaggaatct aaggataatg aacctttagc gaatatacat
      721 tttcaagcaa taggttctgg ttttttaacg tttgttaata cctgccagga acatgatgac
      781 aacagcttaa aattatttgc ttcgctgtta atttcacttt catattctag tgcctacgca
      841 gatttatcag aaacagtgta tattaatgaa aataatgaga gctacctgaa agctcagttt
      901 gaaaaattat ctcaacgtga tatgaagaag tacctgggag agatgaagcg tctggctgat
      961 gggggagaaa tgaattttga tggctatctg gataagatgt cacatctggt gaatgaaggg
     1021 acgctcgatc ctgatatttt aagcaaaatg cgagatgctg caccacaatt aattagcttc
     1081 gcgaagtcgt ttgacccaac ctcaaaggaa gagattaaaa tacttacaga cacttctaaa
     1141 ttaatttatg atttgttcgg ggttaaatcg gagaaataat atgtgaagtt cttcgatagt
     1201 atggaaggca ttatataaaa ggacccaata tttattgggt ccttttttct ctatcaatgc
     1261 tattagcagg gagatatatc accagagttt aatgtgtgat tttttattta tcgtcgaacc
     1321 tggattgttt atcattggcc ttaacaaagt taacggctaa taagattatt tccatcactt
     1381 cgtgagagct tcatgccttg agaggatctc aattttcttt tgcaatgaga caggcgcttc
     1441 ctgttgttat ggtatagtac cccgctattg agcctcctga atagtgatgc tgaataacat
     1501 aaccccatga tatatcgata aaataatctc tacatttgaa aatgcacggt aattctgaaa
     1561 tgcaaaaaat caaccaaacc agcgcaatgc ctgaaaaaac tgacgttcac tggagtggtc
     1621 ggtttagcgt tgcaccaatg ctcgactgga cggacagaca ttgccgctat ttcttgcgtc
     1681 tgctttcccg caatacgttg ctgtataccg aaatggtgac cacaggggcg attattcacg
     1741 gtaaaggtga ttacctggcg tacagtgaag aagaacatcc ggtagcgttg caactcggcg
     1801 gtagcgatcc ggcggcgctg gcacagtgtg cgaagctggc agaagcgcgt ggatatgatg
     1861 agatcaacct gaatgtcggc tgcccgtctg accgggtgca gaacggcatg tttggtgcgt
     1921 gtctgatggg taatgcgcag ctggttgccg attgcgtgaa agcgatgcgc gatgtggtgt
     1981 cgattccggt gacggtgaaa acgcgtattg gcatcgatga ccaggacagc tatgaatttc
     2041 tctgcgattt catcaacacc gtttccggca aaggcgagtg tgggatgttc atcatccatg
     2101 cacgtaaagc ctggctttcg gggttaagcc cgaaagaaaa ccgtgaaatc ccgccgctcg
     2161 attatccgcg tgtgtatcaa ctgaagcgtg actttccgca tctgacaatg tcgattaacg
     2221 gtggtatcaa gtcgctggaa gaggccaaag cacacctgca acatatggat ggcgtgatgg
     2281 tcgggcgcga ggcgtatcag aatccgggta ttctggcggc ggtagaccgg gagatctttg
     2341 gttcctcgga taccgatgcc tatccggtgg cggtagtgcg cgccatgtat ccgtacattg
     2401 agcgtgaact cagccagggg acgtatctcg gccatattac ccggcatatg ttgggcttgt
     2461 tccagggtat tcctggcgcg cggcagtggc ggcgttattt aagtgaaaat gcccataaag
     2521 cgggtgcaga cattaatgtg ttggaacacg cgctcaaact ggtggcggat aagcgttaac
     2581 ttttcaccaa aaagtagtca aattcaccac gccctgcgca ccgtcgcggg gcgttttgct
     2641 gttaaatcaa tagattattt ttggcatgat tcttgtaatg ccagcaagag atttcatatt
     2701 tgggagagca tcatgctgga actacttttt gtgattggct tttttgtcat gctgatggtc
     2761 accgacgttt cgttgctggg cattatcacc gcgctggttg tggcgacggc cattatgttc
     2821 ctcggcggta tgctggcatt gatgattaag ttgctgccgt ggttactact ggcgattgcg
     2881 gtggtgtggg ttattaaggc gattaaagca ccaaaagtgc ctaaatatca gcgttatgac
     2941 cgctggcgtt actaagggat tgtgcggatg atcacaacct aaggttttat ccttagaaca
     3001 aaataggaat tgataatcaa atctgtcact attgcgcctc taacagattc atcgtgctgt
     3061 accctacata cagccgacta taaaaagaaa gggcttccca ggtggaagcc ctatttcttt
     3121 tatggaatca gcaggctgga accttgcgtc gcccggcttt ccagaatctc atgcgcacgc
     3181 tgcgcatcct tcagcggata tttctgctgc tcggcgacat cgaccttaat cacaccgctg
     3241 gcaatcaaag agaacagttc attactggcc tcggttaatt cctcccgcgt ggtgatatag
     3301 ccttgcaggg aagggcgtgt cacatacaac gagccttttt gattgagaat gcctaagttc
     3361 acaccggtaa ccgcacctga tgagttgcca aaactgacca ttaagccgcg gcgttgcagg
     3421 caatccagcg accgttccca ggtgtctctg cccacggaat cgtacactac gcgcactttc
     3481 ttaccgccgg tgatctcttt caatcgctcg accagattct cttcacgata gttaataacc
     3541 tgccacgcgc cggcttttag cgcgctctgc gctttttgcg cggttcctac ggtgccgata
     3601 agtttcgcgc ccagagcttt tgcccactgg caggcaatca agccaacgcc gccagccgct
     3661 gcgtggaaca ggaactgttc atcgggttta atttcatagg ttttgcgcag cagataataa
     3721 accgttaagc ctttcaggaa agatgctgca gcttgctcaa aagaaatagc cgcaggcaga
     3781 atcgccgctt tatccgcatt aatgttatgc acagagctgt aagcgcctaa cgccgactgc
     3841 gcatagacta cacgatcgcc tgccttaata tgctttacac cactgccgac tttactcacg
     3901 atgcctgccg cttcggtacc tgatccgctg ggtagtgatg gcggcgggta aaggccgctg
     3961 cggatatacg tgtcgataaa attgatgccg atggctttat tttcgacctg gatttcattc
     4021 tctgccggat cggcaggagt gaactctacg gcttgaagta cttccgggcc accgtgcttg
     4081 tgaaatttaa ttcgtgttgc catgtgtcct ccagaacgta tcgtcagggt ctgcttcata
     4141 tggtaaagtt tcgacccatt ctttatctcg gtaactccat tcactatggc aggaaataaa
     4201 cccttcaaca aacagcaggc tgaaccccgc gaacgcgatc cacaagttgc cgggctgaaa
     4261 gtgcctccgc actcgatcga agcggagcag tcggtgttgg gcggtttaat gctggataac
     4321 gaacgctggg acgatgtagc cgagcgtgtg gtggcagacg atttttacac ccgcccacac
     4381 cgccatatct ttactgaaat ggcgcgtttg caggaaagcg gtagtcctat cgatctgatt
     4441 acccttgcgg aatcgctgga acgccagggg caactcgata gcgtcggtgg ttttgcttat
     4501 ctggcagagc tgtcaaaaaa tacgccaagt gcggcgaaca tcagtgctta tgctgacatc
     4561 gtgcgtgaac gtgccgttgt ccgtgagatg atctcggttg cgaatgagat tgctgaagcc
     4621 ggttttgatc cgcaggggcg taccagcgaa gatctgctgg accttgctga atcccgcgtc
     4681 tttaaaattg ccgaaagtcg tgcaaacaaa gacgaagggc cgaagaacat cgccgatgtg
     4741 ctcgacgcaa ccgtggcgcg tattgagcag ttgtttcagc agccacacga tggcgttacc
     4801 ggagtaaaca ccggttatga cgatctcaac aaaaaaaccg ctggcttgca gccgtcggat
     4861 ttgatcatcg tcgccgcgcg tccgtcgatg ggtaaaacaa catttgcgat gaacctcgtc
     4921 gaaaacgcgg cgatgttgca ggataaacca gtacttatct tctcgctgga gatgccttca
     4981 gaacagatta tgatgcgttc tctggcgtcg ctgtcgcgcg ttgaccagac taaaatccgt
     5041 accgggcagc tcgatgatga agactgggcg cgcatttccg gcaccatggg tattttgctc
     5101 gaaaaacgca atatctatat cgatgactcc tccggcctga cgccaacgga agtgcgttcc
     5161 cgcgcacgcc gtattgcccg tgaacacggc ggcatcgggc ttatcatgat cgactacctg
     5221 caactgatgc gcgtaccggc gctttccgat aaccgtacgc tggaaattgc agaaatctct
     5281 cgctcgctga aagcactggc gaaagaactg aacgtgccgg tggtggcgct gtcccagttg
     5341 aaccgttctc tggaacaacg tgccgacaaa cgcccggtca actccgacct gcgtgaatct
     5401 ggctctatcg agcaggatgc ggacttgatc atgtttatct atcgtgatga ggtgtatcac
     5461 gaaaacagtg atttaaaagg catcgcggaa attattatcg gtaaacaacg taacggccca
     5521 atcgggacgg tacgcctgac ctttaacggt caatggtcgc gcttcgacaa ctatgcgggg
     5581 ccgcagtacg acgacgaata ataattattt tatgaattag gtaattaaag caaacactta
     5641 tcaaggaaca caaatgcaag cggcaactgt tgtgattaac cgccgcgctc tgcgacacaa
     5701 cctgcaacgt cttcgtgaac tggcccctgc cagtaaaatg gttgcggtgg tgaaagcgaa
     5761 cgcttatggt cacggtcttc ttgagaccgc gcgaacgctc cccgatgctg acgcctttgg
     5821 cgtagcccgt ctcgaagaag ctctgcgact gcgtgcgggg ggaatcacca aacctgtact
     5881 gttactcgaa ggcttttttg atgccagaga tctgccgacg atttctgcgc aacattttca
     5941 taccgccgtg cataacgaag aacagctggc tgcgctggaa gaggctagcc tggacgagcc
     6001 ggttaccgtc tggatgaaac tcgataccgg tatgcaccgt ctgggcgtaa ggccggaaca
     6061 ggctggggcg ttttatcatc gcctgacaca gtgcaaaaac gttcgtcagc cggtgaatat
     6121 cgtcagccat tttgcgcgcg cggatgaacc aaaatgtggc gcaaccgaga aacaactcgc
     6181 tatctttaat accttttgcg aaggcaaacc tggtcaacgt tccattgccg cgtcgggtgg
     6241 cattctgctg tggccacaat cgcattttga ctgggtgcgc ccgggcatca ttctttatgg
     6301 cgtctcgccg ctggaagatc gctccaccgg tgccgatttt ggctgtcagc cagtgatgtc
     6361 actaacctcc agcctgattg ccgtgcgtga gcataaagcc ggagagcctg ttggttatgg
     6421 tggaacctgg gtaagcgaac gtgatacccg tcttggcgta gtcgcgatgg gctatggcga
     6481 tggttatccg cgcgccgctc catccggtac gccagtgctg gtgaacggtc gcgaagtacc
     6541 gattgtcggg cgcgtggcga tggatatgat ctgcgtagac ttaggtccac aggcgcagga
     6601 caaagccggg gatccggtca ttttatgggg cgaaggtttg cccgtagaac gtatcgctga
     6661 aatgacaaaa gtgagcgctt acgaacttat tacgcgcctg acttcaaggg tcgcgatgaa
     6721 atacgtggat taatcgttct gtaatatttg attgtctgtg ccggatgcgg cgtgaatgcc
     6781 ttatccggcc aataaaatcc taaaaattca ataagttgat gttctttcat gctcttataa
     6841 aggtcgtgcc tctggcggat gttcgtttgt catgagtctc actctgttgc taattgccgt
     6901 tcgctcctga acatccactc gatcttcgcc ttcttccggt ttattgtgtt ttaaccacct
     6961 gcccgtaaac ctggagaacc atcgcgtgtt tcaaaaagtt gacgcctacg ctggcgaccc
     7021 gattcttacg cttatggagc gttttaaaga agaccctcgc agcgacaaag tgaatttaag
     7081 tatcggtctg tactacaacg aagacggaat tattccacaa ctgaaagccg tggcggaggc
     7141 ggaagcgcgc ctgaatgcgc agccccatgg cgcttcgctt tatttaccga tggaagggct
     7201 taacagctat cgccatgcca ttgcgccgct gctgtttggt gcggaccatc cggtactgca
     7261 acaacagcgc gtagcaacca ttcaaaccct tggcggctca ggggcattga aagtgggcgc
     7321 ggatttcctg aaacgctact tcccggaatc aggcgtctgg gtcagcgatc ctacctggga
     7381 aaaccacgta gcaatattcg ccggggctgg attcgaagtg agtacttacc cctggtatga
     7441 cgaagcgact aacagcgtgc gctttaatga cctgttggcg acgctgaaaa cattacctgc
     7501 ccgcagtatt gtgttgctgc atccatgttg ccacaaccca acaggtgccg atctcactaa
     7561 tgatcagtgg gatgcggtga ttaaaattct caaagcccgc gagcttatcc cattcctcga
     7621 tattgcctat caaggattta gtgccggtat ggaagaggat gcctacgcta ttcgcgccat
     7681 tgccagcgct ggattacccg ctctggtgag caattcgttc tcgaaaattt tctcccttta
     7741 cggcgagcgc gtcggcggac tttctgttct gtgtgaagat gccgaagccg ctggccgcgt
     7801 actggggcaa ttgaaagcaa cagttcgccg caactactcc agcccgccga atttgggtgc
     7861 gcaggtggtg gctgcagtgc tgaatgacga ggcattgaaa gccagctggc tggcggaagt
     7921 agaagagatg cgtactcgca ttctggcaat gcgtcaggaa ttggtgaagg tattaagcac
     7981 agagatgcca gaacgcaatt tcgattatct gcttaatcag cgcggcatgt tcagttatac
     8041 cggtttaagt gccgctcagg ttgaccgact acgtgaagaa tttggtgtct atctcatcgc
     8101 cagcggtcgc atgtgtgtcg ccgggttaaa tacggcaaat gtacaacgtg tggcaaaggc
     8161 gtttgctgcg gtgatgtaat gcaggaaagc aggctggagt tacccagcct gcagtgaaat
     8221 taaactgtcg tcgctttcac tatttctttg tagatgattt ttttgatgcc gttgttctac
     8281 gtgagagata ataaaacgtt gtcagttctt ttattgttaa gtttatccca attaactgga
     8341 attcctt
//
LOCUS       DADMHC010000173         8136 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.176, whole genome shotgun sequence.
ACCESSION   DADMHC010000173 DADMHC010000000
VERSION     DADMHC010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8136)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8136)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8136
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.176"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(134..210)
                     /locus_tag="JNZ57_003258"
     tRNA            complement(134..210)
                     /locus_tag="JNZ57_003258"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(174..176),aa:Asp,seq:gtc)
     gene            complement(343..1074)
                     /gene="dnaQ"
                     /locus_tag="JNZ57_003259"
     CDS             complement(343..1074)
                     /gene="dnaQ"
                     /locus_tag="JNZ57_003259"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706156.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HAY8829364.1"
                     /translation="MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLT
                     GNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAF
                     DIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRT
                     LHGALLDAQILAEVYLAMTGGQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFAT
                     DEELAAHEARLDLVEKKGGSCLWRA"
     gene            1139..1606
                     /gene="rnhA"
                     /locus_tag="JNZ57_003260"
     CDS             1139..1606
                     /gene="rnhA"
                     /locus_tag="JNZ57_003260"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HAY8829365.1"
                     /translation="MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTN
                     NRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVD
                     LWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV"
     gene            complement(1603..2325)
                     /locus_tag="JNZ57_003261"
     CDS             complement(1603..2325)
                     /locus_tag="JNZ57_003261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308236.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HAY8829366.1"
                     /translation="MKPARVPQTVVAPDRWGDLPWGELYRKALERQLNPWFTKMYGFH
                     LLKIGNLSAEINCEACAVSHQVNVSAQGMPVQVQADPLHLPFADKSVDVCLLAHTLPW
                     CTDPHRLLRETDRVLIDDGWLVISGFNPISLMGLRKLVPVLRKTSPYNSRMFTLMRQL
                     DWLSLLNFEVLHASRFHVLPWNKHGGKLLNAHIPALGCLQLIVARKRTIPLTLNPMKQ
                     SKNKPRIRQAVGATRQCRKPQA"
     gene            2359..3114
                     /gene="gloB"
                     /locus_tag="JNZ57_003262"
     CDS             2359..3114
                     /gene="gloB"
                     /locus_tag="JNZ57_003262"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HAY8829367.1"
                     /translation="MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAIAANNW
                     QPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEF
                     SVIATPGHTLGHICYFSKPYLFCGDTLFSGGCGRLFEGTASQMYQSLNKLSALPDDTL
                     VCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLR
                     TEDIDLINVINEETLLQQPEERFAWLRSKKDRF"
     gene            3186..4544
                     /gene="mltD"
                     /locus_tag="JNZ57_003263"
     CDS             3186..4544
                     /gene="mltD"
                     /locus_tag="JNZ57_003263"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase D"
                     /protein_id="HAY8829368.1"
                     /translation="MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQA
                     RWMDDGTSIAPDGDLWAFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYM
                     YWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNY
                     DARRDVVASTTAALNMMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDF
                     WSLPLPQETKQYVPKMLALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVAD
                     MAGISVSKLKTFNAGVKGSTLGASGPQYVMVPKKHAVQLRDSLASGEIAAVQSTLVAD
                     NTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQR
                     LANNSDSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMP
                     DS"
     gene            complement(4593..5216)
                     /locus_tag="JNZ57_003264"
     CDS             complement(4593..5216)
                     /locus_tag="JNZ57_003264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HAY8829369.1"
                     /translation="MSGLPQGRPTFGAAQNVSAVVAYDLSAHMLDVVAQAAEARQLKN
                     ITTRQGYAASLPFADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRLIVMDVMSP
                     GHPVRDIWLQAVEALRDTSHVRNYASGAWLTLINEANLIVDNLITDKLPLEFSSWVVR
                     MRTPEALVDAIRIYQQSASTEVRTYFSLQTDGSFTSDIIMVEAHKAA"
     gene            complement(5220..6020)
                     /locus_tag="JNZ57_003265"
     CDS             complement(5220..6020)
                     /locus_tag="JNZ57_003265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HAY8829370.1"
                     /translation="MRKNTYAMRYVAGQPAERILPPGSFASIGQALPPGEPLSTEERI
                     RILVWNIYKQQRAEWLSVLKNYGKDAHLVLLQEAQTTPELVQFATANYLAADQVPAFV
                     LPQHPSGVMTLSAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNF
                     SLGVDVYSKQLLPIGDQIAHHSGPVIMAGDFNAWSRRRMNALYRFAREMSLRQVRFTD
                     DQRRRAFGRPLDFVFYRGLNVSEASVLVTRASDHNPLLVEFSPGKPDK"
     gene            6261..7175
                     /locus_tag="JNZ57_003266"
     CDS             6261..7175
                     /locus_tag="JNZ57_003266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8829371.1"
                     /translation="MKATSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMK
                     LGVSLLNRTTRQLSLTEEGERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATP
                     VVLHFLMPLIKPFRERYPEITLSLVSSETIINLIERKVDVAIRAGTLTDSSLRARPLF
                     NSYRKIIASPDYISRYGKPETIDDLKQHVCLGFTEPASLNTWPIACSDGQLHEVKYGL
                     SSNSGETLKQLCLSGNGIACLSDYMIDREIARGELVELMADKVLPVEMPFSAVYYSDR
                     AVSTRIRAFIDFLSEHVKTAPGGAVREA"
     gene            complement(7172..7975)
                     /gene="dkgB"
                     /locus_tag="JNZ57_003267"
     CDS             complement(7172..7975)
                     /gene="dkgB"
                     /locus_tag="JNZ57_003267"
                     /EC_number="1.1.1.346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,5-didehydrogluconate reductase DkgB"
                     /protein_id="HAY8829372.1"
                     /translation="MAIPAFGLGTFRLKDDVVISSVKTALELGYRAIDTAQIYDNEAA
                     VGQAIAESGVSRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWPSPN
                     DEVSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQ
                     NRKVVAWAKQHGIHITSYMTLAYGKALKDEVIARIAAKHNATPAQVILAWAMGEGYSV
                     IPSSTKRKNLESNLKAQNLQLDAEDKKAIAALDCNDRLVSPEGLAPEWD"
BASE COUNT         2181 a         1952 c         1969 g         2034 t
ORIGIN      
        1 gtctaccata tgtgattaac acatttacag cataacaaaa ccatagaccg aagaaatagc
       61 gagatttaaa tgcaaaaaaa accgcagaat taaaaatctt gcggttctct gaactcattt
      121 tcatgagtga atttggcgga acggacggga ctcgaacccg cgcccccctg cgtgacaggc
      181 aggtattcta accgactgaa ctaccgctcc gcgttgtgtt ccgttggtaa cgaggcgaat
      241 attacggatt gcctcaccct tcgtcaacgg tttttctcat cttttgaatc gtttgctgca
      301 aaaatcgccc aagccgctat ttttagcgcc ttttacaggt atttatgccc gccagaggca
      361 gcttccgccc ttcttctcca ccagatcaag acgggcttca tgagctgcaa gctcttcatc
      421 tgtcgcaaaa acaacgcgta acttacttgc ctgacgtaca atgcgctgaa ttgttgcttc
      481 accttgttgc tgctgtgtct ctccttccat cgcaaaagcc atcgacgttt gaccaccggt
      541 catcgccaga taaacttccg caaggatctg tgcatcgagt aatgccccgt gtagcgttcg
      601 tttactgtta tctatttcgt agcgggcaca taacgcatcg aggctgttgc gcttaccagg
      661 aaacattttc ctcgccaccg caaggctatc ggtgacctta cagaaggtat tggtcttcgg
      721 aatatcgcgc ttaagcaacg aaaactcgta gtccataaag ccgatatcga acgctgcgtt
      781 atggatcacc aactccgcgc cgcggatata gtccatgaac tcatcggcta cttcggcaaa
      841 cgtgggctta tcgagcaaaa attcatcggc aataccatgt acgccaaagg cttccggatc
      901 caccagccga tcgggtttga gataaacatg gaagttattg cccgtcaggc gacggttcac
      961 cacttcaacg gcaccaatct caatgatctt gtggccttca tagtgcgcac caatctggtt
     1021 cataccggtg gtttcggtat cgagaacgat ctggcgtgta attgcagtgc tcatagcggt
     1081 catttatgtc agacttatcg ttttacagtt cgattcaatt acaggaagtc taccagagat
     1141 gcttaaacag gtagaaattt tcaccgatgg ttcgtgtctg ggcaatccag gacctggggg
     1201 ttacggcgct attttacgct atcgcggacg cgagaaaacc tttagcgcag gctacacccg
     1261 caccaccaac aaccgtatgg agttgatggc cgctattgtc gcgctggagg cgttaaaaga
     1321 acattgcgaa gtcattttga gtaccgacag ccagtatgtc cgccagggta tcacccagtg
     1381 gatccataac tggaaaaaac gtggctggaa aaccgcagac aaaaaaccag taaaaaatgt
     1441 cgatctctgg caacgtcttg atgctgccct agggcaacat caaatcaaat gggaatgggt
     1501 taaaggccat gccggacacc cggaaaacga acgctgtgat gaactggctc gtgctgcggc
     1561 aatgaatccc acactggaag atacgggcta ccaagtcgaa gtttaagctt gtggtttacg
     1621 acattgccgg gtggctccaa ccgcttggcg aattcgtggc ttgtttttac tctgtttcat
     1681 cgggtttagc gttaaaggaa tagtccgttt ccgggcaaca ataagttgta agcaaccaag
     1741 cgcaggaata tgcgcattca atagttttcc tccgtgtttg ttccacggga gaacgtggaa
     1801 acggctggcg tgcagcactt caaaattcaa caaagagagc cagtccagtt gccgcatcag
     1861 agtaaacatc cggctgttat agggcgaggt ttttcgcaat accggcacaa gtttgcgtaa
     1921 tcccattaaa ctaatgggat tgaagccact aatcaccagc cagccatcat caatcaatac
     1981 ccgatcggtt tcacgcaata aacgatgcgg atcggtgcac cacggcaatg tatgtgccag
     2041 tagacaaaca tcaacggatt tatcggcaaa aggaagatga agtggatccg cctgcacctg
     2101 gacgggcatt ccttgcgcag aaacattcac ttgatgagaa accgcgcacg cttcgcaatt
     2161 gatttctgcg cttaaattgc caatcttaag cagatgaaaa ccatacattt tagtgaacca
     2221 cgggttgagc tggcgctcca gcgccttgcg ataaagctct ccccagggca aatcgcccca
     2281 gcgatcagga gccacgacag tttgagggac tcttgccggt ttcatcacaa ccttccgttt
     2341 cacactaaga ggtaatctat gaatcttaac agtattcccg cctttgatga caattacatc
     2401 tgggttttga atgatgaagc aggtcgctgc ctgattgtcg atcccggaga cgcagagcca
     2461 gtattaaacg ccattgccgc caataactgg caaccggagg ccatatttct cacccaccat
     2521 catcacgatc acgttggcgg cgtaaaagaa ctggtggaaa agtttccgca aattgtggtg
     2581 tatggtccac aagagacaca agataaggga acaacacagg tagtcaaaga tggcgaaact
     2641 gccttcgttt tggggcatga atttagtgta attgccacac cgggtcacac tttaggacat
     2701 atctgttact tcagtaaacc ttatctattt tgcggcgaca cgctgttttc tggtgggtgt
     2761 ggtaggttgt ttgaagggac agcatcacaa atgtatcaat cacttaataa gttaagtgcg
     2821 ttacctgacg atacattggt atgttgtgct catgaatata cgttatcaaa tatgaagttt
     2881 gctttgagta ttcttccgca cgatttgtcc ataaatgatt attatcgtaa agttaaggag
     2941 ttacgggcaa aaaatcaaat aacactaccc gtaattctga aaaatgagcg gcaaattaat
     3001 gtttttttaa gaacggaaga tattgattta attaatgtaa ttaatgaaga aacattattg
     3061 caacaacctg aagagcgttt tgcatggtta aggtcaaaga aagataggtt ctgataaaac
     3121 tttcttgtca tcggctccgt tcgccgttat gatcggtcgt cttttaagca actattgaca
     3181 cacacatgaa ggcaaaagcg atattactcg cctctgtcct gctcgtgggt tgccagagta
     3241 ccggcaacgt tcaacagcac gcacagagcc tttctgcagc tggtcaaggg gaagcagcaa
     3301 agtttacaag tcaggcacga tggatggacg atgggacgtc tatcgcgcca gatggtgact
     3361 tgtgggcttt cattggcgac gagctaaaga tgggaattcc ggaaaatgac cggattcgcg
     3421 aacagaaaca gaaatattta cgcaataaga gctatctcca cgatgtaact ttacgggcag
     3481 agccgtatat gtactggata gcagggcaag ttaaaaaacg taacatgcct atggaactgg
     3541 tactactacc catagtggag agcgcttttg atcctcacgc aacgtctggc gccaatgccg
     3601 caggcatctg gcagatcatt ccgagcacgg ggcgcaatta tggtttgaaa cagacccgca
     3661 attatgacgc gcgtcgcgat gttgttgctt caacaactgc cgcgctgaac atgatgcagc
     3721 gtctgaacaa gatgtttgac ggcgactggc ttctgaccgt agcggcttat aacagcggcg
     3781 aaggtcgggt catgaaggca attaaaacga acaaagcgcg tgggaaatcc acggacttct
     3841 ggtcgttacc gttgccgcag gaaacgaagc agtacgtgcc taaaatgctg gcattgagtg
     3901 atattctcaa aaacagcaag cgttatggcg tacgtctgcc aacgaccgat gaaagccgtg
     3961 ctctggcgcg tgtgcacctg agcagcccgg ttgaaatggc gaaggttgca gatatggcgg
     4021 ggatttccgt cagcaagctg aagacattca acgctggcgt aaaaggctcc acgctgggcg
     4081 caagtggccc gcagtacgtg atggtgccaa agaagcatgc agttcaactg cgtgattctc
     4141 tcgcttcagg cgaaattgct gctgtacagt cgacgctggt tgccgacaat acgccgctta
     4201 acagccgtgt ttacaccgta cgctctggcg acacgctttc aagcatcgct tcacgtctcg
     4261 gcgtaagcac caaagatttg cagcagtgga acaaactgcg cggatctaag ctgaagccag
     4321 gccaaagttt gacgattggt gcaggcagta gcgcacagcg gttggcaaac aacagcgata
     4381 gcattacgta tcgtgtgcgc aaaggcgatt cgctttcaag cattgctaaa cgccacggcg
     4441 tgaacatcaa agatgtgatg cgctggaaca gcgacactgc gaatctgcaa ccaggcgata
     4501 agctgacgtt gtttgtgaaa aacaacaaca tgccagattc ctgacaaacc agataataaa
     4561 aaaggcaccg attcccccgg tgcctttttt atttatgccg ctttatgtgc ttctaccatg
     4621 atgatatcac tggtgaaaga gccatcagtc tgcaaggaaa aatacgttct cacctctgtc
     4681 gatgcgctct gttggtaaat gcgaatagcg tctactaacg cttctggcgt acgcattctc
     4741 acgacccatg aagaaaattc cagcggtaac ttatctgtaa ttaaattatc aactatcaga
     4801 ttggcttcat tgattaacgt caaccacgca ccgctggcgt agtttcgtac gtgagaggta
     4861 tcgcgtaatg cttctaccgc ctgtaaccag atgtcgcgca ctgggtgacc cggagacatt
     4921 acatccatca caatcagcct accgccaggt ttcaatatcc tattcacttc tcgcagtgct
     4981 gcaccaacat catgccagtg atgggcagaa taacggctga taacaatatc aaatgcgtta
     5041 tcggcaaatg gcagacttgc ggcatatccc tggcgggtgg tgatattttt cagttgccgg
     5101 gcttcggcag cttgtgccac gacatccagc atgtgggccg ataagtcata cgccaccacc
     5161 gcgctcacgt tttgcgcagc gccaaacgtt ggtctgccct gtggcagacc tgacatacct
     5221 tatttatcag gcttgccggg actgaattca acgagtagcg gattgtgatc ggaagcgcgc
     5281 gtaaccagta cagaagcttc actgacgttc agaccacggt agaaaacaaa atcgagcggg
     5341 cgaccaaacg cccgacggcg ctgatcatcg gtaaaacgca cctggcgcag cgacatttcc
     5401 cgcgcaaagc gatataacgc gttcatcctt ctacggctcc aggcattgaa atctcccgcc
     5461 ataatgaccg ggccgctgtg gtgagctatc tgatcaccaa taggaagtaa ctgcttacta
     5521 tagacatcca cgcccagact gaagttgacg gcgtgtatat taaccaccat caacaggcgg
     5581 gtgtcaggta atggatagac cgtcaccagt gccgacttcg ccagacgcaa aatgggttct
     5641 cgttcacgta acgggcagca atacactgga tgtgccgccg aaagggtcat tacgccagaa
     5701 ggatgttgtg gcagcacgaa agcgggtacc tgatcggcgg caagatagtt agcggtcgca
     5761 aactgtacta actctggcgt tgtctgcgct tcctgcaata acaccagatg tgcatctttg
     5821 ccgtagttct ttaataccga caaccattca gcgcgttgct gtttgtatat gttccacacc
     5881 aggatccgaa tacgctcttc ggtacttaac ggttccccag gtggtaatgc ctggccgatg
     5941 ctcgcaaaag accccggcgg taagatcctt tccgcaggtt gtccggcaac atagcgcatg
     6001 gcataggtgt tttttcgcac ttttgacttt gaaacctcta ttacgtcaac ccttccgcac
     6061 tcgggagggt tctactatta tagggatttt agctcactct ttcaacgagc aattgtatat
     6121 tgttatgtaa gcaagtgctt acaccggtca gaattttgct cattatggag aacattaaat
     6181 cgcatgacat atcacgcatc ctgatggttt aatgacaaat aaattcaaaa tatctcttct
     6241 attttgcaac aggagcaaaa atgaaagcca cgtcggaaga actcgccatt tttgtttcgg
     6301 tcgtcgaaag cggcagcttt agccgggcag cggaacaatt agggcaagca aactcagcgg
     6361 taagccgggc ggtgaaaaag ctggagatga aacttggcgt tagcctgctt aatcggacca
     6421 cgcgacaact tagcctgacg gaagaaggcg agcgttattt tcgtcgcgta cagtcaattt
     6481 tgcaggagat ggcagcggca gaatcagaaa ttatggagac gcgtaataca ccgcgtggac
     6541 tgttacggat cgatgccgca actccagtgg tgctgcactt tctgatgccg ttaattaagc
     6601 ctttccgtga acgctatccg gaaatcactt tgtcgctagt ctcctccgaa acgattatta
     6661 atttgatcga aagaaaagtg gatgtcgcga tacgcgctgg tacgttaacg gattccagct
     6721 tacgtgctag gccgttattt aacagttatc gaaaaattat cgcctccccc gattatattt
     6781 cccgctacgg gaagccagaa acgatcgacg atttaaagca acatgtttgc ctgggattca
     6841 ctgaacccgc ttccctcaat acctggccga tagcctgtag tgatggacaa ttacatgagg
     6901 tgaaatacgg tttgtcatcc aatagtgggg aaacactgaa acagctttgc ctgagtggca
     6961 acgggattgc gtgtttgtcc gactacatga tcgacagaga aatcgctcgc ggagaattgg
     7021 tggagttaat ggcagataaa gtgttgccag tggaaatgcc attcagtgcc gtctattaca
     7081 gcgaccgtgc ggtaagtacg cgcatccggg cttttatcga tttccttagc gagcatgtaa
     7141 aaacagctcc cggaggagct gtcagagagg cttaatccca ttcaggagcc agaccttccg
     7201 ggctaaccag gcggtcgttg caatccagtg cggcgatcgc ttttttatct tcggcatcaa
     7261 gctgtaaatt ttgtgcctta agattacttt ccaggttttt acgtttagta gaagaaggaa
     7321 ttactgagta accttccccc atagcccacg ccagaatcac ttgtgccgga gtcgcattgt
     7381 gtttagctgc gatacgagca ataacctcat ctttcagggc cttaccatac gccagcgtca
     7441 tataggaggt aatatggatg ccgtgctgtt tagcccaggc aaccacttta cggttttgca
     7501 gataaggaga gagttcaatc tggttagtag cgatgttttc agcgccaaca gcagcaatcg
     7561 ccttttccat caatgggatc gtgaagttgg aaataccgat ctcacgcgtc agcccttgtt
     7621 ttttggcttc cagcagcgcc tgcataaact cttcaacaga gacttcatcg tttggtgacg
     7681 gccagtggat tagcgtcaga tcaacataat cggtacgcaa tttttgcagg ctctctttca
     7741 gacttgggat caatttgtct ttgctgagat tttcaatcca gattttagtg gtgatgtaga
     7801 gttcatgacg tgacacgcca ctttctgcaa tcgcctgacc tactgcggct tcgttatcat
     7861 agatttgtgc ggtatcaatt gcgcgataac caagttcaag cgccgttttc acagatgaaa
     7921 taacaacgtc gtctttcaga cggaaagtac ctaaaccaaa tgcagggata gccataatat
     7981 gcctctttta atgctatttt cgttaactga ggtgattatg ggcttcagac tgttgaggaa
     8041 aaaaaagcgt aaaatgcaga ggatttttgc gattctggca ataatagata tacagacgaa
     8101 aaaaaacctc gagcgttaac tcgaggcttc ttaata
//
LOCUS       DADMHC010000174         8071 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.177, whole genome shotgun sequence.
ACCESSION   DADMHC010000174 DADMHC010000000
VERSION     DADMHC010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8071)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8071)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8071
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.177"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            189..1604
                     /gene="tnaA"
                     /locus_tag="JNZ57_003268"
     CDS             189..1604
                     /gene="tnaA"
                     /locus_tag="JNZ57_003268"
                     /EC_number="4.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709490.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophanase"
                     /protein_id="HAY8829373.1"
                     /translation="MENFKHLPEPFRIRVIEPVKRTTRAYREEAIIKSGMNPFLLDRE
                     DVFIDLLTDSGTGAVTQSMQAAMMRGDEAYSGSRSYYALAESVKNIFGYQYTIPTHQG
                     RGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFD
                     TGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAK
                     KYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPM
                     GGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYR
                     IAQVQYLVDGLEEIGVVCQQAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIR
                     AVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAANIK
                     GLTFTYEPKVLRHFTAKLKEV"
     gene            1695..2936
                     /gene="tnaB"
                     /locus_tag="JNZ57_003269"
                     /pseudo
     CDS             1695..2936
                     /gene="tnaB"
                     /locus_tag="JNZ57_003269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312673.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity tryptophan permease TnaB"
     gene            3068..4243
                     /gene="mdtL"
                     /locus_tag="JNZ57_003270"
     CDS             3068..4243
                     /gene="mdtL"
                     /locus_tag="JNZ57_003270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtL"
                     /protein_id="HAY8829374.1"
                     /translation="MSRFLICSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAF
                     SVYLAGMAAAMLFAGKVADRSGRKPVAIPGAALFIIASVFCSLAETSTLFLAGRFLQG
                     LGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLF
                     WAMAMMGIAVLMLSLFILKETRPASPAASDKPRENSESLLNRFFLSRVVITTLSVSVI
                     LTFVNTSPVLLMEIMGFERGEYATIMALTAGVSMTVSFSTPFALGIFKPRTLMITSQV
                     LFLAAGITLAVSPSHAVSLFGITLICAGFSVGFGVAMSQALGPFSLRAGVASSTLGIA
                     QVCGSSLWIWLAAVVGIGAWNMLIGILIACSIVSLLLIMFVAPGRPVAAHEEIHHHA"
     gene            4218..5177
                     /gene="yidZ"
                     /locus_tag="JNZ57_003271"
     CDS             4218..5177
                     /gene="yidZ"
                     /locus_tag="JNZ57_003271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator YidZ"
                     /protein_id="HAY8829375.1"
                     /translation="MKKSITTLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLA
                     KLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELA
                     AESPLMMIMLNALSKRIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSR
                     ELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHETWNLDTFLRYPHISICWEQSDTWAL
                     DNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL
                     PFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA"
     gene            5334..6083
                     /locus_tag="JNZ57_003272"
     CDS             5334..6083
                     /locus_tag="JNZ57_003272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709485.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829376.1"
                     /translation="MATHFARGILTEGHLISVRLPSQCHQEARNIPPHRQSRFLASRG
                     LLAELMFMLYGIGELPEIVTLPKGKPVFSDKNLPSFSISYAGNMVGVALTTEGECGLD
                     MELQRATRGFHSPHAPDNHTFSSNESLWISKQNDPNEARAQLITLRRSVLKLTGDVLN
                     DDPRDLQLLPIAGRLKCAHVNHVEALCDAEDVLVWSVAVTPAIEKLSVWELDGKHSWK
                     SLPDIHSRANNPTSRMMRFAQLSTVKSFSPN"
     gene            6105..6671
                     /gene="yieF"
                     /locus_tag="JNZ57_003273"
     CDS             6105..6671
                     /gene="yieF"
                     /locus_tag="JNZ57_003273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent chromate oxidoreductase YieF"
                     /protein_id="HAY8829377.1"
                     /translation="MSEKLQVVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPSIA
                     DIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEYNYSVPGVLKNAIDWLSRLP
                     DQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDRQT
                     GEVIDQGTLDHLTGQLTAFGEFIQRVKI"
     gene            complement(6725..8062)
                     /locus_tag="JNZ57_003274"
     CDS             complement(6725..8062)
                     /locus_tag="JNZ57_003274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HAY8829378.1"
                     /translation="MSQQHTTQASGQGMLERVFKLREHGTTARTEVIAGFTTFLTMVY
                     IVFVNPQILGVAGMDTSAVFVTTCLIAAFGSIMMGLFANLPVALAPAMGLNAFFAFVV
                     VQAMGLPWQIGMGAIFWGAVGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMG
                     LKNAGVIVANSETLVSIGNLTSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLG
                     WMLGDVHYNGIVSAPPSVMTVVGHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVT
                     DKAGLADEKGKFPRMKQALYVDSISSVTGSFIGTSSVTAYIESSSGVSVGGRTGLTAV
                     VVGLLFLLVIFLSPLAGMVLGYAAAGALIYVGVLMTSSLARVNWQDLTESVPAFITAV
                     MMPFSFSITEGIALGFISYCVMNIGTGRLRDLSPCVIIVALLFILKIVFIDAH"
BASE COUNT         1974 a         2029 c         2018 g         2050 t
ORIGIN      
        1 ccgattagat tcaatgtgaa cgattagttt gctatatctt aattttgcct tttgcaaagg
       61 ccatctctcg tttatttact tattttagta aatgatggtg cttgtatata tacatggcga
      121 attaatggat attgcagatg taatattcac agggatcact gtaattaaaa taaatgaagg
      181 attatgtaat ggaaaacttt aaacatctcc ctgaaccgtt ccgcattcgt gttattgagc
      241 cagtaaaacg tactactcgc gcttatcgtg aagaagcaat tattaaatcc ggtatgaacc
      301 cgttcctgct ggatcgcgaa gatgtgttta tcgatttact gaccgacagc ggcaccgggg
      361 cggtaaccca aagtatgcag gcagcgatga tgcgcggcga cgaagcctac agcggcagcc
      421 gcagctacta tgcgttagcc gagtcagtga aaaatatctt tggttatcaa tatactattc
      481 cgactcacca gggccgtggc gcagagcaaa tctatattcc ggtactgatt aaaaaacgcg
      541 agcaggaaaa aggcctggat cgcagcaaaa tggtggcatt ctctaactat ttctttgata
      601 ccacgcaggg ccatagccag attaacggct gtaccgtgcg taacgtctat atcaaagaag
      661 ccttcgatac gggcgtgcgt tacgacttta aaggcaactt tgacctcgaa ggattagaac
      721 gcggtattga agaagttggc ccgaataacg tgccgtatat cgttgcaacc atcaccagta
      781 actctgcagg tggtcagccg gtttcactgg caaacttaaa agcgatgtac agcatcgcga
      841 agaaatacga tattccggtg gtaatggact ccgcacgctt tgctgaaaac gcctatttca
      901 tcaagcagcg tgaagcagaa tacaaagact ggaccatcga gcagatcacc cgcgaaacct
      961 acaaatatgc cgatatgctg gcgatgtccg ccaagaaaga tgcgatggtg ccgatgggcg
     1021 gcttgctgtg catgaaagac gacagcttct ttgatgtgta caccgagtgc agaacccttt
     1081 gcgtggtgca ggaaggcttc ccgacatatg gcggcctgga aggcggcgcg atggagcgtc
     1141 tggcggtagg tctgtatgac ggcatgaatc tcgactggct ggcttatcgt atcgcgcagg
     1201 tacagtatct ggtcgatggt ctggaagaga ttggcgttgt ctgccagcag gcgggcggtc
     1261 acgcggcatt cgttgatgcc ggtaaactgc tgccgcatat cccggcagac cagttcccgg
     1321 cacaggcgct ggcgtgcgag ctgtataaag tcgccggtat ccgtgcggta gaaattggct
     1381 ctttcctgtt aggccgcgat ccgaaaaccg gtaaacaact gccatgcccg gctgaactgc
     1441 tgcgtttaac cattccgcgc gcaacatata ctcaaacaca tatggacttc attattgaag
     1501 cctttaaaca tgtgaaagag aacgcggcga atattaaagg attaaccttt acctacgaac
     1561 caaaagtatt gcgtcacttc accgcaaaac tgaaagaagt ttaattaata ctacagagtg
     1621 gctataagga tgttagccac tctcttaccc tacatcctca ataacaaaaa tagccttcct
     1681 ctaaaggtgg catcatgact gatcaagctg aaaaaaagca ctctgcattt tggggtgtta
     1741 tggttatagc aggtacagta attggtggag gtatgtttgc tttacctgtt gatcttgccg
     1801 gtgcctggtt tttctggggt gcctttatcc ttatcattgc ctggttttca atgcttcatt
     1861 ccgggttatt gttattagaa gcaaatttaa attatcctgt cggctccagt tttaacacca
     1921 tcaccaaaga tttaatcggt aacacctgga acattatcag cggtattacc gttgccttcg
     1981 ttctctatat cctcacttat gcctatatct ctgctaatgg tgcgatcatt agtgaaacga
     2041 tatcaatgaa tttgggctat cacgctaatc cacgtattgt cgggatctgc acagccattt
     2101 tcgttgccag cgtattgtgg ataagttcgt tagccgccag tcgcattacc tcattgttcc
     2161 tcgggctgaa gattatctcc tttgtgatcg tgtttggttc tttcttcttc taggtcgatt
     2221 actccatcct gcgcgatgcc accagcacca ctgcgggaac gtcttacttc ccgtatatct
     2281 ttatggcttt gccggtgtgt ctggcgtcat ttggtttcca cggcaatatt cccagcctga
     2341 ttatttgcta tggaaaacgc aaagataagt taatcaaaag cgtggtattt ggttcgctgc
     2401 tggtgattta tctcttctgg ctctattgca cgatggggaa tattccgcgc gaaagcttta
     2461 aggcgataat ctcctcaggc ggcaacgttg attcgctggt gaaatcgttc ctcggcacca
     2521 aacagcacgg cattatcgag ttttgcctgc tggtgttctc taacttagct gttgccagtt
     2581 cgttctttgg tgtcacgctg gggttgttcg attatctggc ggacctgttt aagattgata
     2641 actcccacgg cgggcgtttc aaaaccgtgc tgttaacctt cctgccacct gcgttgttgt
     2701 atctgatctt cccgaacggc tttatttacg ggatcggcgg tgccgggctg tgcgccacca
     2761 tctgggcggt cattattccc gcagtgcttg caatcaaagc tcgcaagaag tttcccaatc
     2821 agatgttcac ggtctggggc ggcaatctta ttccggcgat tgtcattctc tttggtataa
     2881 ccgtgatttt gtgctggttc ggcaacgtct ttaacgtgtt acctaaattt ggctaaatcc
     2941 ttcaagaagc cagccattcg ctggcttctt gcctctcagg aaatcactta tgtccaaatg
     3001 gcaactcgcc tgatcctcct tcaccacgta tgctttgcgt caccttacta tcaggacgct
     3061 ttagcccatg tcccgctttt tgatttgtag ttttgcccta gttttacttt atcccgccgg
     3121 gattgatatg tacctcgttg gtttaccgcg catcgccgcc gatctcaatg ccagcgaagc
     3181 gcagttgcat attgcgttct ccgtatatct ggcggggatg gcagctgcga tgttatttgc
     3241 cggtaaagtg gccgatcgtt cagggagaaa gccggtcgcc atacccggcg cggcgctatt
     3301 tattattgcc tcggtgttct gttcactggc tgaaaccagc acgttatttc ttgcaggccg
     3361 atttctacag gggttgggcg caggctgttg ttacgtagtg gcgttcgcca ttttgcgcga
     3421 cacgctggat gatcgacgtc gggctaaagt gctgtcatta ctcaacggta ttacctgcat
     3481 cattccggtg ttagcgccag tgctcggaca tctgattatg cttaaattcc cgtggcagag
     3541 tctgttctgg gcgatggcaa tgatgggcat cgcggtactg atgttgtctt tgtttatttt
     3601 aaaagaaacg cgcccagcgt cccccgctgc ttcggacaaa ccacgagaaa atagcgagtc
     3661 gctgcttaat cggtttttcc tcagccgtgt tgttatcacc accctcagcg tttcggtgat
     3721 cctcactttc gtcaatacat cgccggtatt gctgatggaa atcatgggtt ttgagcgcgg
     3781 agaatacgcc accattatgg cgttgaccgc tggcgtcagc atgaccgttt cattctccac
     3841 gccatttgcg ctgggaattt ttaagccacg tacgttgatg atcacctcgc aggtgttatt
     3901 ccttgctgcg gggatcaccc ttgccgtttc accttcccat gcggtttctc tgtttggtat
     3961 cacactgatt tgcgccggtt tctcggtagg ttttggcgta gcgatgagtc aggcgttagg
     4021 accattttca ttacgcgcgg gcgtagccag ctcgacctta ggtattgcgc aggtttgcgg
     4081 ttcgtcactg tggatttggc tggcagcggt ggttggtatc ggcgcatgga atatgctgat
     4141 cgggattctg attgcctgta gcatagtgag cctgttgctg attatgttcg tcgcgcctgg
     4201 acgccccgtt gccgctcatg aagaaatcca tcaccacgct tgatctcaat ctgctgctct
     4261 gtctgcaact gctgatgcag gagcgcagcg tgaccaaagc ggcgaagcgg atgaacgtga
     4321 ccccttcagc ggtgagtaag tcgctggcaa agttaagagc gtggtttgac gacccgctct
     4381 ttgtgaactc accgctgggg ctgtcgccca caccgctaat ggtcagcatg gagcaaaatc
     4441 tggcggaatg gatgcaaatg agcaatctgc tgctggataa accgcaccac cagacaccgc
     4501 gcggcctgaa gtttgagttg gcggcggaat cgccgctgat gatgatcatg cttaatgcgc
     4561 tgtcgaaacg gatctaccaa cgttacccgc aggcgaccat caaactacgt aactgggatt
     4621 acgattcctt agatgccatt actcgtggtg aagtggatat tggtttttcc ggtcgcgaaa
     4681 gccatcctcg ctcgcgggag ctgttaagct cgctaccgtt agccattgat tatgaagtgc
     4741 tgtttagtga tgtaccctgc gtctggttac gcaaagatca tccggcactg catgaaacgt
     4801 ggaatctgga caccttttta cgttatccgc atatcagcat ttgctgggaa cagagcgaca
     4861 cctgggcgct ggacaatgtg ttacaggagc tggggcgcga acgcacgatt gctatgagcc
     4921 tgccggaatt tgagcagtca ctgtttatgg cagcgcaacc cgacaatctg ctactggcga
     4981 ccgcgccgcg ctactgtcag tactacaatc aactccatca actgccgttg gttgctcttc
     5041 ctctcccgtt tgacgaaagc cagcaaaaaa agctggaagt tccttttacc ctgctgtggc
     5101 ataaacggaa cagccataat ccgaagatcg tctggttacg ggaaaccatt aaaaaccttt
     5161 acgcgtcgat ggcataaccg aatcgtatga aacgcgaccc aatttcacaa taaaatgtaa
     5221 aaaagttgta ataagcttgt ctgaatcgaa cttttagccg ctttagtctg tccatcattc
     5281 cagtaaatga ttactcttat attcataatg gaccattaag catggagcga aaaatggcga
     5341 ctcactttgc ccgagggatt ttaacggaag gacatctgat ttctgttcgt ctcccctccc
     5401 agtgtcatca agaagcccga aacattcccc ctcatcgtca aagccgtttt ctggcgtcca
     5461 gaggtttact cgcagaactg atgttcatgc tgtatggcat tggcgaattg ccggaaatcg
     5521 tcaccctgcc gaaaggtaaa ccggttttca gtgataaaaa tttgccttcg ttttctattt
     5581 cctatgccgg gaatatggtt ggcgtggcgt taacaaccga aggtgaatgt ggcctcgata
     5641 tggaactaca gcgtgcgacg cgcgggtttc atagcccaca cgcgcccgat aaccacacct
     5701 tttccagcaa tgaatcgcta tggatcagta aacaaaacga tcctaacgaa gcgcgggcgc
     5761 agctcatcac gctgcgccga agcgtgctaa aactaaccgg tgatgttttg aatgacgatc
     5821 cgcgcgatct gcagctgctg cccattgccg gacgcctgaa atgtgctcat gtaaatcatg
     5881 tagaagcgtt atgcgacgcg gaggacgtgc tggtgtggtc cgtggcggtc acgcccgcga
     5941 ttgaaaagct cagtgtctgg gagttagatg gcaaacacag ctggaaaagc ctgccggata
     6001 ttcacagccg cgccaacaat cctaccagcc ggatgatgcg ttttgcccag ctctctaccg
     6061 tgaagtcttt ttcgccaaat tgatagacaa ccacaggagt cattatgtct gaaaaattgc
     6121 aggtggttac gttactgggg agcctgcgca aaggctcatt taatggcatg gttgcacgta
     6181 ccctgccgaa aattgctccg gcgagcatgg aagtcaatgc gttaccttcc attgccgaca
     6241 ttcccctgta tgacgctgac gtacagcagg aagaaggttt tccagcaacg gttgaagctc
     6301 tggcggaaca gatccgtcag gctgacggtg tggtgatcgt cacgccggaa tataactact
     6361 cggtaccggg tgtgctgaaa aatgccatcg actggctttc ccgcctgccg gatcaaccgc
     6421 tggccggtaa accggtgttg attcagacca gctcaatggg cgtgattggc ggcgcgcgct
     6481 gtcagtatca cctgcgccag attctggttt tcctcgatgc aatggtgatg aacaagccgg
     6541 aatttatggg cggcgtgatt cagaacaaag ttgatcggca aaccggagaa gtgattgatc
     6601 agggtacgct ggaccacctg accgggcaat tgaccgcatt tggtgagttt attcagcgag
     6661 ttaagatcta aataaaaaac ccgccagtaa tcatgcatgg cgggttttta atgcgctatc
     6721 gattttaatg agcgtcgata aatacaatct tcaggataaa cagcagcgca acgatgatta
     6781 cgcacgggct aaggtcacgc agacgcccgg taccaatatt catcacgcag taggagataa
     6841 agcccagcgc aataccttcg gtaatcgaaa agctgaacgg catcatcacg gcggtaataa
     6901 acgccggaac agattcagta agatcctgcc agttcacgcg agcaagactt gaggtcatca
     6961 acacgccaac gtagatcaac gcgccagctg cagcgtagcc tagcaccatt cccgccagcg
     7021 gcgacagaaa gataaccagc aggaacagca gaccaacaac cactgccgtc agaccggtac
     7081 gaccgccaac cgatacgccg gaagaggact caatataagc cgtaacggaa gaagtaccga
     7141 taaacgaacc ggtcacggaa gagatactgt cgacatacag cgcctgcttc atgcgcggga
     7201 atttcccctt ctcatccgcc agacctgctt tatcggtcac gccaatcagc gtaccggagg
     7261 agtcaaacaa gttgaccaac atgaaagaga aaatcacccc tgccagcccg aggttaaacg
     7321 acccggctaa atctacatga cccacaactg tcattacgct cggcggcgca gaaacgatgc
     7381 cattgtagtg cacatcaccc agcatccagc ccagcagcgt cgtcaccacg atagaaacca
     7441 gcaccgctgc gtgaatgttg cgcgaggcca gaatagcaat gatgaagaag ccgaggatac
     7501 ccagaagtac gctgtgagaa gtcagattac cgatgctcac cagcgtttcc gagttagcga
     7561 caatcacacc tgcgtttttc agccccatca tgccgataaa caggccgata ccgctggtaa
     7621 tacccacacg cagacttacc ggaatgttag caatcatcca gtaacgaacg cggaaaatgg
     7681 tcaaaagaag cagtccgaca gcgccccaga agattgcgcc cataccgatc tgccacggca
     7741 gccccattgc ctggacaacc acaaaagcga aaaaggcgtt aagccccatc gcaggagcca
     7801 gcgccaccgg aaggtttgca aacaatccca tcataatgct accgaaagca gcaatcagac
     7861 aggttgttac gaagacggca ctggtgtcca tgccagcaac gcccagaatt tgtgggttaa
     7921 caaaaacgat gtaaaccatc gtcaggaagg tggtaaaacc ggcgatcact tcggtccgtg
     7981 ccgtcgtgcc atgttcgcgc agtttaaaca cgcgttccag catcccctgg ccagaagcct
     8041 gggttgtgtg ttgttgactc attatctatt t
//
LOCUS       DADMHC010000175         8038 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.178, whole genome shotgun sequence.
ACCESSION   DADMHC010000175 DADMHC010000000
VERSION     DADMHC010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8038)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8038)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8038
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.178"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..413)
                     /locus_tag="JNZ57_003275"
     CDS             complement(<1..413)
                     /locus_tag="JNZ57_003275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311911.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HAY8829379.1"
                     /translation="MPRLTAKDFPQELLDYYDYYAHGKISKREFLNLAAKYAVGGMTA
                     LALFDLLKPNYALTTQVEFTDPEIVAEYITYPSPNGHGEVRGYLVKPAKMSGKTPAVV
                     VVHENRGLNPYIEDVARRVTKAGYIALAPDGLSSVG"
     gene            569..1609
                     /gene="gpr"
                     /locus_tag="JNZ57_003276"
     CDS             569..1609
                     /gene="gpr"
                     /locus_tag="JNZ57_003276"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glyceraldehyde 3-phosphate reductase"
                     /protein_id="HAY8829380.1"
                     /translation="MVWLANPERYGQMQYRYCGKSGLRLPALSLGLWHNFGHVNALES
                     QRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDM
                     WPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSG
                     KALYAGISSYSPERTQKMVELLHEWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVG
                     CIAFTPLAQGLLTGKYLNGIPQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQ
                     RGQSMAQMALSWLLKNDRVTSVLIGVSRAEQLEENVQALNNLTFSTEELAQIDQHIAD
                     GELNLWQASSDK"
     gene            complement(1649..2143)
                     /locus_tag="JNZ57_003277"
     CDS             complement(1649..2143)
                     /locus_tag="JNZ57_003277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00645 family protein"
                     /protein_id="HAY8829381.1"
                     /translation="MERFLENAMYASRWLLAPVYFGLSLALVALALKFFQEIIHVLPN
                     IFSMAESDLILVLLSLVDMTLVGGLLVMVMFSGYENFVSQLDISENKEKLNWLGKMDA
                     TSLKNKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLT
                     RHNH"
     gene            2334..3218
                     /gene="yghA"
                     /locus_tag="JNZ57_003278"
     CDS             2334..3218
                     /gene="yghA"
                     /locus_tag="JNZ57_003278"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(+)-dependent aldehyde reductase"
                     /protein_id="HAY8829382.1"
                     /translation="MSHLKDPTTQYYTGEYPKQKQPTPGIQAKMTPVPDCGEKTYVGS
                     GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKA
                     VLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAIN
                     VFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVA
                     EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQE
                     SSYVTAEVHGVCGGEHLG"
     gene            complement(3377..3802)
                     /gene="exbD"
                     /locus_tag="JNZ57_003279"
     CDS             complement(3377..3802)
                     /gene="exbD"
                     /locus_tag="JNZ57_003279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HAY8829383.1"
                     /translation="MAMHLNENLDDNGEMHDINVTPFIDVMLVLLIIFMVAAPLATVD
                     VKVNLPASTSTPQPRPEKPVYLSVKADNSMFIGNDPVTDETMITALNALTEGKKDTTI
                     FFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEETAKAK"
     gene            complement(3809..4543)
                     /gene="exbB"
                     /locus_tag="JNZ57_003280"
     CDS             complement(3809..4543)
                     /gene="exbB"
                     /locus_tag="JNZ57_003280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HAY8829384.1"
                     /translation="MGNNLMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSK
                     SVEFFNQKRRLKREQQLLAEARSLNQANDIAADFGSKSLSLHLFNEAQNELELSEGSD
                     DNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIA
                     QTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLL
                     LQSRDLDLEASAAAHPVRVAQKLRAG"
     gene            4795..5982
                     /gene="metC"
                     /locus_tag="JNZ57_003281"
     CDS             4795..5982
                     /gene="metC"
                     /locus_tag="JNZ57_003281"
                     /EC_number="4.4.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HAY8829385.1"
                     /translation="MADKKLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFESMEAKKH
                     ATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCALFPCGAAAVANSILAFVEQGD
                     HVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSIT
                     MEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDA
                     MIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEW
                     LAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLSNEELANYLDNFSLF
                     SMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLTRLHIGLEDVDDLIADLDAGFA
                     RIV"
     gene            6122..6781
                     /locus_tag="JNZ57_003282"
     CDS             6122..6781
                     /locus_tag="JNZ57_003282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY8829386.1"
                     /translation="MAVIQDIIAALWQHDFAALADPHIVSVVYFVMFATLFLENGLLP
                     ASFLPGDSLLILAGALIAQGVMDFLPTIAILTAAASLGCWLSYIQGRWLGNTKTVKGW
                     LAQLPAQYHQRATCMFDRHGLLALLAGRFLAFVRTLLPTMAGISGLPNRRFQFFNWLS
                     GLLWVSVVTSFGYALSMIPFVKRHEDQVMTFLMILPIALLTAGLLGMLFVVIKKKYCN
                     A"
     gene            complement(6821..7720)
                     /locus_tag="JNZ57_003283"
     CDS             complement(6821..7720)
                     /locus_tag="JNZ57_003283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003024513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HAY8829387.1"
                     /translation="MKREEICRLLADKVNKLKNKENSLSELLPDVRLLYGETPFARTP
                     VMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLN
                     VDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILG
                     KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEAN
                     MSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSR
                     EFKRYFGVTPGEDAARMRAMQGN"
     gene            7914..>8038
                     /locus_tag="JNZ57_003284"
     CDS             7914..>8038
                     /locus_tag="JNZ57_003284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020883658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase"
                     /protein_id="HAY8829388.1"
                     /translation="MNNFNLHTPTRILFGKGAIAGLREQIPHDARVLITYGGGSV"
BASE COUNT         2005 a         2062 c         2014 g         1957 t
ORIGIN      
        1 ccaacggaac ttaagccgtc aggtgccagg gcgatatacc ccgccttcgt cactcgccgt
       61 gccacatctt cgatatacgg attcagtcca cgattctcat gcaccaccac cacggctggc
      121 gttttgccgc tcatttttgc gggtttcacc agataacccc gtacctcgcc gtgaccattt
      181 ggcgaaggat acgtgatgta ctcagcaaca atctccgggt cggtaaactc tacctgagtc
      241 gtcagcgcat aatttggctt gagcaaatca aacaacgcta atgccgtcat cccgcccacc
      301 gcatacttcg ccgcaaggtt gaggaactca cgtttcgaaa ttttcccgtg agcgtaatag
      361 tcgtagtaat ccaacaactc ttgtgggaaa tctttggcgg ttaaacgcgg catcgttgca
      421 ttcctcaact ggtgtttttt aagcaaagca taagcgcgtg tttttgccca gtttttcgtc
      481 actctgtgag ccagactacg ggatacgcgc tggcgaatcg ctaaactaga aacattgttt
      541 cgaaattgaa cggtggaaag gagaggtcat ggtctggtta gcgaatcccg aacgttacgg
      601 gcagatgcag taccgctatt gcggaaaaag tggtttacgc ctgcccgcgt tatcgctcgg
      661 tttatggcac aatttcggtc acgttaacgc gctggaatca cagcgtgcaa tcctgcgtaa
      721 agcgtttgat ttaggcatta cgcactttga tttagccaac aattacgggc cgcctccagg
      781 aagcgcagaa gagaactttg gtcgcctgct gcgggaggat tttgccgctt atcgcgatga
      841 actgattatc tctaccaagg ctggctacga tatgtggccc ggcccttacg gctctggcgg
      901 ttcacgtaaa tacctgctcg ccagcctcga ccaaagcctg aagcgtatgg ggcttgagta
      961 tgtcgatatc ttttactctc atcgcgtcga tgaaaatacg ccgatggaag aaaccgcctc
     1021 tgcgctggct catgcggtac aaagcggtaa ggcgctgtat gccgggatct cctcttactc
     1081 gccagagcgg acgcaaaaaa tggtcgagtt gctgcacgag tggaaaattc cgcttttaat
     1141 tcatcaacct tcgtacaatt tactgaaccg ctgggtggat aaaagcggcc tgctggatac
     1201 cctgcaaaat aacggcgtgg gctgtattgc ctttactcct ctggctcagg gattgctgac
     1261 cggaaaatat ctcaacggca taccgcaaga ttcacggatg catcgtgaag ggaataaagt
     1321 tcgtggtctg acgccgaaaa tgcttaccga agccaacctc aacagcctgc gcttattgaa
     1381 tgaaatggca cagcagcgtg gacaatcaat ggcgcaaatg gcgttaagct ggttgctgaa
     1441 aaatgatcgc gtgacgtcgg tattgattgg tgtcagccgc gcggagcaac tagaggagaa
     1501 cgtgcaggcg ctgaataatc tgacatttag caccgaggag ctggcgcaga ttgatcagca
     1561 tatcgccgat ggcgagctga atctgtggca ggcgtcttcc gataaatgac ttgttaataa
     1621 cgggcgcgcg aaccgcgccc gaatcagatc agtgattatg acgagtcagt cggtcaagat
     1681 agcccatcac aaatgcagag agcacaaacg tcagatggat aatgacgtac cacatcagtt
     1741 tgttatccgg gacatttttc gcatccataa agacgcgcag taagtgaatg gaagaaattg
     1801 ccacaatcga cgctgctact ttgtttttca gcgacgttgc gtccattttc cccagccagt
     1861 tcagcttctc tttgttctcg gagatatcca gctgcgagac gaaattctca taaccggaaa
     1921 acatcaccat caccagcaaa ccgccaacca gcgtcatatc caccagcgac agcaacacga
     1981 ggatcaaatc tgattccgcc atcgagaaga tattcggcag tacgtgaata atctcctgga
     2041 agaacttcag cgccagggca actaacgcca gcgaaaggcc aaagtacacg ggggcaagca
     2101 gccagcgaga agcatacatt gcattttcaa gaaaacgttc catacattcc tgtcgtgtag
     2161 ttaaaacggg caacagtata tcgcaattga gtaaacagca cgcaacagca aatcaacata
     2221 tacgttaaac ctttgtcgca taattctgag gtttagggat cttcctggtt cccttatcaa
     2281 cgcatcgaga gcgtctaccc ttaaaagacg ttgaacctga agggagaaaa acaatgtctc
     2341 atttaaaaga cccgactacg cagtattaca ctggtgaata tcccaaacag aaacaaccga
     2401 cgccaggcat ccaggcgaag atgacaccgg taccggattg cggcgagaaa acctatgttg
     2461 gtagcggtcg cctgaaagat cgtaaagcac tggtgacagg gggcgattcc ggaataggtc
     2521 gcgctgccgc catcgcttac gcgcgtgaag gggctgacgt ggcgatcagt tatcttcccg
     2581 tggaagaaga agacgctcag gatgtgaaaa agatcattga agaatgcgga cgcaaagccg
     2641 ttctgctgcc aggcgattta agcgatgaga aattcgcccg ttcgctggtt cacgaagcgc
     2701 acaaggcgtt aggtgggctg gatattatgg cgctggtcgc cgggaaacag gttgccattc
     2761 cggatattgc agacctcacc agcgaacagt ttcaaaagac ctttgccatt aacgttttcg
     2821 cgctgttctg gctaacccag gaagcgatcc ccctgctacc gaaaggtgca agtatcatca
     2881 ccacttcgtc aatccaggca taccagccaa gtccgcattt actggactat gcggctacga
     2941 aggcggcgat tctgaactac agccgtggcc tggcaaaaca ggtcgcggag aaaggtattc
     3001 gggtgaatat tgtcgcgcca ggccctatct ggacggcact gcaaatttcc ggcggacaaa
     3061 cgcaggataa gatcccgcag tttggtcagc aaacgccgat gaagcgtgcg gggcaaccgg
     3121 cggaactggc ccctgtatat gtttatctgg caagtcagga gtcgagctac gtcaccgcag
     3181 aagtgcacgg tgtgtgcggc ggcgagcatt taggttaaaa aaatgcccgg ttgtgaaaag
     3241 caaccgggca tcattgtgaa ttcactctta cctgatgtgg cgaaaacgcc ttatccgcct
     3301 acaaacgcat gaagattcaa catgttgcaa tagattttgt aggcctgatg agcgtagcgc
     3361 atcaggcaat tctactttac ttcgctttgg cggtttcttc gccgaccaga cctatcttca
     3421 ggtaacccgc ctgatgcagc gtatccatta ccttcatcaa cgtctcgtaa tcgacggttt
     3481 tatccgctcg gaagaagatg gtggtgtctt tcttgccttc ggttaacgca ttcaacgccg
     3541 taatcattgt ttcatcggtg accggatcgt taccgataaa catcgagttg tctgccttca
     3601 ccgacagata aaccggtttt tccgggcgcg gctgcggcgt gctggtagaa gcaggcaagt
     3661 tcaccttcac atctaccgtc gctaacggtg ccgccaccat aaagataatc agcagaacca
     3721 acatcacgtc gataaacggc gtcacgttga tatcatgcat ttcgccgtta tcgtcgaggt
     3781 tttcgttaag atgcattgcc atcggatatt atcctgcgcg taatttttgt gcgacacgaa
     3841 ccggatgcgc agcggcgctg gcttccagat ccaggtcacg gctttgcagc aacaatacct
     3901 gcgctgcaac atcacccagc atcgctttaa agccgccaat ctggcgtgca aatacgttat
     3961 agataacgac cgcaggaatc gctgccacga ggccgattgc cgttgctaac agagcttctg
     4021 cgatacccgg cgcaacgact gccaggttag tggtctgcgt ttgcgcgata ccaataaagc
     4081 tgttcatgat gccccagacc gtaccaaaca gaccaacgaa cggagaaatc gcgccgatgg
     4141 ttgccagata gccgttaccg cggcccattt gacgacccac tgcggcgacc cgacgctcca
     4201 gacggaagct ggtacgttct ttaatacctt cgttatcgtc gctgccttct gacagttcca
     4261 gctcattctg cgcttcattg aacaaatgca ggcttaagct tttgctacca aaatcagcgg
     4321 cgatatcgtt ggcctggttt aaggaacgcg cttcagccag cagttgctgc tcgcgcttta
     4381 ggcgacgctt ctgattgaag aactctacgc tcttactgaa gaagattgcc caggtgacta
     4441 cggaggccaa aataagccca atcatcacgc acttaacgac aatatcggcg tgctgataca
     4501 taccccagac ggaaaggtcc gtctgcatta aattattacc cactgtgtat ctccaggacg
     4561 caagtcacaa aatctgcgca taataatatc aaaacgacgt cgaattgata gtcgttctca
     4621 ttactatttg catactgccg tacctttgct ttcttttcct tgcgtttacg cagtaaaaaa
     4681 gtcaccagca cgccatttgc gaaaattttc tgctttatgc caattcttca ggatgcgccc
     4741 gcgaatattc atgctagttt agacatccag acgtataaaa acaggaatcc cgacatggcg
     4801 gacaaaaagc ttgatactca actggtgaat gcaggacgca gcaaaaaata cactcttggc
     4861 gcggtaaata gcgtgattca gcgcgcttct tcgctggtat ttgagagtat ggaagccaaa
     4921 aagcacgcga cgcgcaatcg cgccaatggc gagttgttct atggacggcg cggaacgtta
     4981 acccattttt ccttacaaca agcgatgtgt gaactggaag gtggcgcagg ctgcgcgcta
     5041 tttccctgcg gggcggcagc ggttgctaat tcgattcttg cttttgtcga acagggcgat
     5101 catgtgttga tgaccaacac tgcctatgaa ccgagtcagg atttctgtag caaaatcctc
     5161 agcaaactgg gcgtaacgac atcgtggttt gatccgctga ttggtgccga tatcgttaag
     5221 catctgcagc caaacactaa aatcgtgttt ctggaatcgc caggctccat caccatggaa
     5281 gtccacgacg ttccggcgat tgttgccgcc gtacgcagtg tggtgccgga tgccatcatt
     5341 atgatcgaca acacctgggc agccggtgtg ctgtttaagg cgctggattt tggcatcgat
     5401 gtttctattc aagccgccac caaatatctg gttgggcatt cagatgcgat gattggcact
     5461 gccgtgtgca atgcccgttg ctgggagcag ctacgggaaa acgcctatct gatgggccag
     5521 atggtcgatg ccgataccgc ctatataacc agccgtggcc tgcgcacatt aggtgtgcgt
     5581 ttgcgtcaac atcatgaaag cagtctgaaa gtggctgaat ggctggcaga acatccgcaa
     5641 gtagcgcgag ttaaccaccc tgctctgcct ggcagtaaag gacacgaatt ctggaaacga
     5701 gactttacag gtagcagcgg gctgttttcc tttgtgctta agaaaaaact cagtaatgaa
     5761 gagctggcga actatctgga taacttcagt ttattcagca tggcctactc gtggggcggg
     5821 tatgaatcgt tgatcctggc gaatcaacca gaacatatcg ccgccattcg cccacaaggc
     5881 gagatcgatt ttagcgggac cttgactcgc ctgcatattg gtctggaaga tgtcgacgat
     5941 ctgattgccg atctggacgc cggttttgcg cgaattgtat aacattgcca cttttggaca
     6001 attttgcaga catttaattg tgaaaagtct taaattgttg cgtccgggat caaggcgtcc
     6061 cggacgaatc aggagtacaa taggcagata aaggcttaaa cgctgttcca caggaaagtc
     6121 catggctgtt attcaagata tcatcgctgc gctctggcaa cacgactttg ccgcgctggc
     6181 ggatcctcat attgttagcg ttgtttactt tgtcatgttt gccacgctgt ttttagaaaa
     6241 cggcctgctg cccgcctcat ttttgccagg cgacagcttg ttgatactgg caggcgcatt
     6301 gattgcccag ggggttatgg attttctgcc tacgattgcg attctgaccg ccgcagcaag
     6361 tctgggctgc tggctaagtt atattcaggg gcgctggtta gggaatacca aaacggtgaa
     6421 aggctggctg gcacagcttc ctgctcaata tcaccagcgc gccacctgca tgtttgaccg
     6481 ccacggtctg ctggcgctgc tggctggacg ttttcttgca tttgtccgta cgctgctgcc
     6541 aaccatggcg ggaatttccg gtctgccaaa ccgccgcttc cagtttttca actggttaag
     6601 tggattgctg tgggtcagcg tggtaaccag ttttggctat gccttaagta tgattccgtt
     6661 cgttaaacgc catgaagatc aggtaatgac gttcctgatg atcctgccaa ttgccttgtt
     6721 aaccgctggc ttgttaggca tgctgtttgt ggtgattaaa aaaaaatact gtaacgcctg
     6781 acgattttcc ccgttcccgg ctgctgtacc gggaacgtat ttaattcccc tgcatcgccc
     6841 gcattcttgc cgcatcttcc cccggcgtca caccgaagta acgtttaaac tcacggctaa
     6901 attgcgatgc gctttcatag ccgacgcgca tcgctgctgc gctggccttc atgccgtcat
     6961 ggatgatcat catccgcgcc ttatgcagac ggtaattctt caaatactgc aacggcgagg
     7021 tgctggtgac agacttaaaa ttatggtgga acgccgatac gctcatgttg gcttctgccg
     7081 ccagttgctc gacgctcagg ttttcggtgt atttattctc aatccgtttc agcacgcggc
     7141 taatcagact gaagtgagtc tggcgactga ccagcgccag taacgcgccg ccgcaaggtc
     7201 cggtcagcac gtagtacaga atttcgcgga tgatctgttt gccgagaata cgcgcatcca
     7261 gtggtcgctc catcacgtcg agtaaccgct ccgccgcgca taaaatctct tctgataacg
     7321 tggcggagtt aatcccgctg gctgccatcg acggctggaa atgctcatct tcgccaatgt
     7381 ccatcaacag ttcctgtaac tgcaaaatat cgacattgag acgcaaccct gccagcggca
     7441 cctctgacgt ggcataggtt tcgcactcaa acggcaacgg caccgtcagc agcaggtatt
     7501 cattggcatc ataacgaaac acgcgttcat tgatataacc gattttatgc ccggaaaaga
     7561 gaattatgat gccaggctcg tacatcaccg gtgtacgtgc gaaaggcgtc tcgccataca
     7621 acaaacgcac atcgggcaac agttctgaca aactattttc tttatttttc agtttattaa
     7681 ctttatccgc cagcaagcgg caaatctctt cacgtttcat atcgcgtaat ttcttaggaa
     7741 taatgcggca atttgattgt gcgcaatttt gtagcatttc tccagcactc tggagaaata
     7801 ggcaagacat tggcagaaat gagcattgag agccagggcg ctggcgatca caatgaaaaa
     7861 catcaggcag atcgttctct gccctcatat tggcccagca aagggagcaa gtaatgaaca
     7921 actttaatct gcacacccca acccgcattc tgtttggtaa aggcgcaatc gctggtttac
     7981 gcgaacaaat tcctcacgat gctcgcgtat tgattaccta cggtggcggc agcgtgaa
//
LOCUS       DADMHC010000176         8034 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.179, whole genome shotgun sequence.
ACCESSION   DADMHC010000176 DADMHC010000000
VERSION     DADMHC010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8034)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8034)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8034
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.179"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            1..188
                     /locus_tag="JNZ57_003285"
                     /pseudo
     CDS             1..188
                     /locus_tag="JNZ57_003285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001402762.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
     gene            411..908
                     /gene="ubiC"
                     /locus_tag="JNZ57_003286"
     CDS             411..908
                     /gene="ubiC"
                     /locus_tag="JNZ57_003286"
                     /EC_number="4.1.3.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709881.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HAY8829389.1"
                     /translation="MSHPALTQLRALRYFKEIPALDPQLLDWLLLEDSMTKRFEQQGK
                     TVSVTMIREGFVEQNEIPEELPLLPKESRYWLREILLCADGEPWLAGRTVVPVSTLSG
                     PELALQKLGKTPLGRYLFTSSTLTRDFIEIGRDAGLWGRRSRLRLSGKPLLLTELFLP
                     ASPLY"
     gene            921..1793
                     /gene="ubiA"
                     /locus_tag="JNZ57_003287"
     CDS             921..1793
                     /gene="ubiA"
                     /locus_tag="JNZ57_003287"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HAY8829390.1"
                     /translation="MEWSLTQNKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGVP
                     QLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVV
                     LVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAA
                     VSESVPLSCWLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGIL
                     QIGVLALMAIIGELNGLGWGYYWSILVAGALFVYQQKLIANREREACFKAFMNNNYVG
                     LVLFLGLAMSYWHF"
     gene            complement(1948..4371)
                     /gene="plsB"
                     /locus_tag="JNZ57_003288"
     CDS             complement(1948..4371)
                     /gene="plsB"
                     /locus_tag="JNZ57_003288"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsB"
                     /protein_id="HAY8829391.1"
                     /translation="MSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRPIMYV
                     LPYNSKADLLTLRAQCLAHDLPDPLEPLEIDGMLLPRYVFIHGGPRVFTYYTPKEESI
                     KLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAVLWLG
                     RDSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFN
                     KLLASRAIAKAVEDEAHSKKISHEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWN
                     RLYQGINVHNAERVRQLAHDGHELVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGIN
                     LNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVEYFVEGGRSRTG
                     RLLDPKTGTLSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLP
                     QMLRGLSKLRNLGQGYVNFGEPMPLMTYLNQHVPDWRESIDPIEAVRPAWLTPTVNNI
                     AADLMVRINNAGAANAMNLCCTALLASRQRSLTREQLTEQLNCYLDLMRNVPYSTDST
                     VPSASASELIDHALQMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLPSLMA
                     AIVTQHRHISRDVLMEHVNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQ
                     DDELHINPSHSRTLQLLAAGARETLQRYAITFWLLSANPSINRGTLEKESRTVAQRLS
                     VLHGINAPEFFDKAVFSSLVLTLRDEGYISDSGDAEPAETMKVYQLLAELITSDVRLT
                     IESATQGEG"
     gene            4542..4910
                     /locus_tag="JNZ57_003289"
     CDS             4542..4910
                     /locus_tag="JNZ57_003289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HAY8829392.1"
                     /translation="MANNTTGFTRIIKAAGYSWKGLRAAWINEAAFRQEGVAVLLAVV
                     IACWLDVDAITRVLLISSVMLVMIVEILNSAIEAVVDRIGSEYHELSGRAKDMGSAAV
                     LIAIIVAVITWCILLWSHFG"
     gene            5020..5628
                     /gene="lexA"
                     /locus_tag="JNZ57_003290"
     CDS             5020..5628
                     /gene="lexA"
                     /locus_tag="JNZ57_003290"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000646075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="repressor LexA"
                     /protein_id="HAY8829393.1"
                     /translation="MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAE
                     EHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDP
                     SLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKK
                     QGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL"
     gene            5647..7026
                     /gene="dinF"
                     /locus_tag="JNZ57_003291"
     CDS             5647..7026
                     /gene="dinF"
                     /locus_tag="JNZ57_003291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709876.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter DinF"
                     /protein_id="HAY8829394.1"
                     /translation="MPPGVAVCFSSLFIRLVCMAFLTSSDKALWHLALPMIFSNITVP
                     LLGLVDTAVIGHLDSPVYLGGVAVGATATSFLFMLLLFLRMSTTGLTAQAYGAKNPQA
                     LARALVQPLLLALGAGALIALLRTPIIDLALHIVGGSEAVLEQARRFLEIRWLSAPAS
                     LANLVLLGWLLGVQYARAPVILLVVGNILNIVLDVWLVMGLHMNVQGAALATVIAEYA
                     TLLIGLLMVRKILKLRGISGEMLKTAWRGNFRRLLALNRDIMLRSLLLQLCFGAITVL
                     GARLGSDIIAVNAVLMTLLTFTAYALDGFAYAVEAHSGQAYGARDGSQLLDVWRAACR
                     QSGIVALLFSVVYLLAGEHIIALLTSLTQIQQLADRYLIWQVILPLVGVWCYLLDGMF
                     IGATRAAEMRNSMAVAAAGFALTLLTLPWLGNHALWLALTVFLALRGLSLAAIWRRHW
                     RNGTWFAAT"
     gene            7142..7351
                     /locus_tag="JNZ57_003292"
     CDS             7142..7351
                     /locus_tag="JNZ57_003292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HAY8829395.1"
                     /translation="MNKDEAGGNWKQFKGKVKEQWGKLTDDDMTIIEGKRDQLVGKIQ
                     ERYGYQKDQAEKEVVDWETRNEYRW"
     gene            complement(7393..7908)
                     /gene="zur"
                     /locus_tag="JNZ57_003293"
     CDS             complement(7393..7908)
                     /gene="zur"
                     /locus_tag="JNZ57_003293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc uptake transcriptional repressor Zur"
                     /protein_id="HAY8829396.1"
                     /translation="MEKTTTQELLAQAEKICAQRNVRLTPQRLEVLRLMSLQDGAISA
                     YDLLDLLREAEPQAKPPTVYRALDFLLEQGFVHKVESTNSYVLCHLFDQSTHTSAMFI
                     CDRCGAVKEECAEGVEDIMHTLAAKMGFALRHNVIEAHGLCAACVEVEACRHPEQCQH
                     DHSVQVKKKPR"
BASE COUNT         1812 a         1968 c         2208 g         2046 t
ORIGIN      
        1 atatgttgaa tcctacaaaa gataccaatt ggaattccac gtgtatctat aaatcctgac
       61 ataagatgtt gcctgttaat cttactcagg aaacactttt caactccaaa tctcaggata
      121 aacatgcgct tttccccatt tttactgcga gttggcgagc ttatcgtata atgaataagg
      181 gtgcttaagt aaaggaaaac atcaccgttc ctggcatcct gggcggtgat gcccctatgg
      241 ttgccctcgc cagcgcgggc atcggcaaag cgtaaggttc aaaagcgatt taccacttca
      301 tgcgattgtt gcgtttttgt tgcgcattag atcacttaat ttgctttaca tctcccgtaa
      361 acacttttct gcgatacaat gcctttacgt tatgtaacgg agagttcggc atgtcacacc
      421 ccgcgttaac gcaactgcgt gcgctgcgct attttaaaga gatccctgcc ctggatccgc
      481 aactgctcga ctggctgttg ctggaggatt ccatgacaaa acgttttgaa cagcagggaa
      541 aaacggtaag cgtgacgatg atccgcgaag ggtttgtcga gcagaatgaa atccccgaag
      601 aactgccgct gctgccgaaa gagtctcgtt actggttacg tgaaattttg ttatgtgccg
      661 atggtgaacc gtggcttgcc ggtcgtaccg tcgttcctgt gtcaacgtta agcgggccgg
      721 agctggcgtt acaaaaattg ggtaaaacgc cgttaggacg ctatctgttc acatcatcga
      781 cattaacccg ggactttatt gagataggcc gtgatgccgg gctgtggggg cgacgttccc
      841 gcctgcgatt aagcggtaaa ccgctgttgt taacagaact gtttttaccg gcgtcaccgt
      901 tgtactaaga ggaaaaaaat atggagtgga gtctgacgca gaataagctg ctggcgtttc
      961 atcgcttaat gcgtacggat aagccaattg gcgcgttact gctgctctgg ccaacattat
     1021 gggcgttgtg ggtggcgaca ccgggcgttc ctcagctctg gatcctggcg gtatttgtcg
     1081 cgggtgtctg gctgatgcgc gctgccggat gtgtggtgaa tgattatgct gaccgaaagt
     1141 ttgatggtca tgttaagcgc acggcgaacc gaccacttcc cagcggcgcg gtaacagaga
     1201 aagaggcgcg cgcgctgttt gtagtgctgg tactgatttc gtttttactg gtactgacgc
     1261 tgaatacgat gaccattctg ttgtcgattg ccgctctggc gttggcgtgg gtgtacccgt
     1321 ttatgaagcg gtatacccat ctcccgcaag tggtgctggg cgcggcgttt ggctggtcga
     1381 ttccaatggc ttttgccgct gtgagtgagt cggtgccatt gagttgctgg ttaatgttcc
     1441 tcgccaatat tctctgggcg gtggcttacg acacgcagta tgcgatggtt gaccgcgatg
     1501 atgatgtgaa gattggcatt aaatccacgg caatcctgtt cggccaatac gataaattga
     1561 ttattggtat tttgcagatt ggcgtactgg cactgatggc gatcatcggt gagttaaatg
     1621 gcttaggctg gggatattac tggtcaattc tggtggctgg cgcgctgttt gtttatcaac
     1681 aaaaactgat tgccaaccgc gagcgtgaag cctgctttaa agcatttatg aataataact
     1741 atgttggtct ggtactattt ttagggctgg caatgagtta ctggcatttc tgatgatgta
     1801 aaaaagccgg atgatcatcc ggctttcttc tgggttgcct gatgcgcggc gcttctcagg
     1861 cctacacaac acatcgcaat ttattgaatt tgcagattat ggaatgccgg ataaggcgtt
     1921 ttcgccgcat ccggcaattc tctctggtta cccttcgccc tgcgtcgcac tctcaatcgt
     1981 caaacgcacg tctgatgtaa tcaactccgc cagcaactga taaaccttca tcgtttctgc
     2041 cggttcggca tcgccgctat cgctgatata cccttcatca cgcagcgtca gcaccagaga
     2101 actgaacacc gccttgtcga agaactccgg cgcgttgata ccgtgcagca cggagagacg
     2161 ttgcgcgacg gtgcggctct ctttctccag cgtaccgcgg ttgatcgacg ggttagcgct
     2221 caacagccag aaggtgatgg cataacgttg cagcgtttcg cgcgcgcctg cggccagcag
     2281 ctgtagcgtg cgagaatgcg acgggttgat atgcaactca tcatcttgca gggtaatcag
     2341 cccctgacgt tgcatctcat ttgccaacgc atcaataacg tccggcaact cgtcgcgatc
     2401 ccagcgcagg aacagctccg ctttcagcat tgggtaaagc acattgacgt gctccatcaa
     2461 tacgtcgcgg gagatgtggc gatgctgggt gacaattgcc gccatcagcg aaggcagcac
     2521 caacatatgc gcaatgttgt tgcgatagta ggtcatcagc accgcttgct cgcgcggcag
     2581 aatgatgatg tcgccgatag tgtctttctc aacttcaaac ttgttcattt gcagcgcgtg
     2641 atcgataagc tcgctggcgc tggctgaagg aacggtagag tccgtggagt aaggtacgtt
     2701 gcgcatcaga tccaggtagc agttgagttg ctcggttaac tgctcgcggg taagtgagcg
     2761 ctgacgtgat gccagtagcg cggtacagca gaggttcatg gcgtttgccg cgcctgcgtt
     2821 gttaatgcgt accatcagat cggcagcaat attattgacc gtcggcgtta accatgccgg
     2881 acgcaccgct tcgatgggat cgatagattc acgccagtca ggtacatgct ggttaaggta
     2941 ggtcatcaac ggcattggtt caccgaagtt gacgtaaccc tgaccgagat tacgcagctt
     3001 gcttaaaccg cgcagcatct gcggcaggct ctctttctct ttcgtcgcac cgcgcagttc
     3061 tttggcgtaa gtccccactt ccatgacgtg ctcataaccg atatagatcg gaatcagcgt
     3121 aatcggacgc gtgccgccac gcagcatcgc ctgaatggtc atcgacagcg taccggtttt
     3181 cggatccagc aaacgccccg tacgggaacg accgccttcc acgaaatact cgacggaata
     3241 accacggctg aacagttcgc cgagatactc acggaaaacg gtggaataaa gtttattgcc
     3301 tttaaacgta cggcgaataa agaacgcccc cagacggcgg aaaatcggcc cggccggcca
     3361 gaaattcagg ttgatcccgg cggcgatatg cggcggcacg agcccctggt ggtacagcac
     3421 gtaagaaagt agcaggtagt ccatgtgact gcggtggcaa ggcacataca ccagctcatg
     3481 accgtcgtgg gccagctggc gaacgcgctc ggcgttatgg acgttgatgc cctgataaag
     3541 tcggttccag gtgaagccca gaatgcggtc agtcaggcgg atcatctcgt aagagaaatt
     3601 cgccgcaatc tcttccatca gcgcaatcgc gttctgctgc gctttttcat gggagatttt
     3661 tttgctgtgc gcttcatctt ctaccgcttt ggcaatggcg cgggaggcga gcagcttatt
     3721 aaacagatcc tgacgagcag gcagacgtgg gcccacagca gccagacgtt gacgggcaaa
     3781 gtgcatacgc gccacgcgcg ccagtttctg tgcgatagtt ttatccgtgc cgtgttcatc
     3841 cgccatacgg cgcagcgaaa ctgacggcga gaaacgcaca aaactgtcgc gaccgagcca
     3901 cagtacggcg aaaaatttct gtacgccgtt aagcatacgc agcggcgggt ttacttcgcc
     3961 tttttcacgc cccggcgcgc gaccaaacat caccgatact ggcaccatct gcacatccag
     4021 atttgggttg ctacggtgca aatcgagata gtcgtggaac agcttaatag actcttcttt
     4081 cggcgtgtaa taggtgaata cacgcggccc gccgtgaatg aacacatagc gcggcagtag
     4141 catgccgtcg atttccagcg gctctaacgg gtcaggcaag tcatgagcca gacactgggc
     4201 gcgtaacgtc agcaaatctg ctttcgagtt gtacggtaaa acgtacataa ttggacgaga
     4261 ggtatccagc cccagttccg gggcaggatc tgccggaata gacttgcttt ttaccaggat
     4321 gcttaatggt aaattcagta atttgtagta aattcgtggc cagccggaca taaacgatgt
     4381 aaagcctctg gttaataatg caaatgcgcg gcaaggatag cagaaagtca tgggaaattc
     4441 tgtggtatcc gctcatgttt cgcgcggcgt tacgcaaacc cgaatcatcg gatttaacgg
     4501 tacactgata ttgacgctca taatgtaaaa aggttctttc aatggccaat aataccactg
     4561 gattcacccg aattatcaaa gctgctggct attcctggaa aggtttacgc gctgcatgga
     4621 tcaacgaagc ggcattccgt caggaaggcg tagcggtatt gttggcggtg gtcatcgcct
     4681 gctggctgga tgtggacgca attacccgcg tgctgcttat cagctccgtg atgctggtga
     4741 tgattgtgga aatcctcaat agcgccatcg aagcagtggt tgaccgaatt ggctctgaat
     4801 accatgagct ttccggacgc gcaaaagata tgggatccgc cgcggtgctg attgcgatta
     4861 tcgtcgccgt gataacctgg tgcatcctgt tatggtcgca ttttggataa cccttccaga
     4921 attcgataaa tctctggttt attgtgcagt ttatggttcc aaaatcgcct tttgctgtat
     4981 atactcacag tataactgta tatacaccca gggggcggaa tgaaagcgtt aacggccagg
     5041 caacaagagg tgtttgatct catccgtgat cacatcagcc agacaggtat gccgccgacg
     5101 cgtgcggaaa tcgcgcagcg tttggggttc cgttccccaa acgcggctga agaacatctg
     5161 aaggcgctgg cacgcaaagg agttattgaa attgtttccg gcgcatcacg cgggattcgt
     5221 ctgttgcagg aagaggaaga agggttgccg ctggtaggtc gtgtggctgc cggtgaaccg
     5281 cttctggcgc agcagcatat tgaaggtcat tatcaggtcg atccttcctt gttcaagccg
     5341 aatgctgatt tcctgctgcg cgtcagcggg atgtcgatga aagatattgg cattatggat
     5401 ggcgacttgc tggcagtgca taaaactcag gatgtacgta acggtcaggt cgttgtcgca
     5461 cgtattgatg acgaagttac cgttaagcgc ctgaaaaaac agggcaataa agtcgaactg
     5521 ttgccagaaa atagcgagtt taaaccaatt gtcgttgacc ttcgtcagca gagcttcacc
     5581 attgaagggc tggcggttgg agttattcgc aacggcgact ggctgtaaca tatctctgag
     5641 accgcgatgc cgccaggcgt cgcggtttgt ttttcatctc tcttcatcag gcttgtctgc
     5701 atggcattcc tcacttcatc tgataaagca ctctggcatc tcgccttacc catgattttc
     5761 tccaatatca ccgttccgtt gctgggactg gtcgatacgg cggtaattgg tcatcttgat
     5821 agtccagttt atttgggcgg cgtggcggtt ggtgcaacgg cgaccagctt tctctttatg
     5881 ctgttgctgt ttttacgcat gagcaccacc gggctgactg cgcaggctta tggtgccaaa
     5941 aatcctcagg cattagcccg tgcgctggtg caaccgttgc tgttggcgtt gggggcaggg
     6001 gcgttaattg cgctgctgcg tacaccgatt atcgatctgg cactgcatat tgttggcggt
     6061 agtgaagcag tcctggaaca ggcgcggcgc tttcttgaaa tccgctggtt aagcgcaccg
     6121 gcgtcgctgg cgaatctggt attacttggt tggttactcg gcgtgcaata tgcccgtgcg
     6181 ccagtaattt tgttagtggt cggcaatatc ctcaacattg tgctggatgt ctggctggtg
     6241 atggggctgc atatgaacgt gcagggcgcg gcgctggcga cggttattgc ggaatatgca
     6301 acattgctga ttggtctgct aatggtgcgt aaaatcctca aactacgcgg aatttccggc
     6361 gaaatgctga aaactgcctg gcgaggaaac ttccgtcgct tgctggcgct taaccgcgat
     6421 atcatgctgc gttcgctgtt gttgcaactc tgtttcggcg cgatcaccgt acttggtgcg
     6481 cgactgggga gtgacattat cgctgttaac gcggttctga tgacgctact cacctttacc
     6541 gcctatgcgc tggatggttt tgcctacgcg gttgaagcgc attccggtca ggcgtacggt
     6601 gcgcgcgacg gtagccagtt gctggatgtc tggcgggcag cgtgccgcca gtcggggatc
     6661 gtagcgttac tgttttcggt agtttatttg ctggcagggg aacacatcat tgcgttgctg
     6721 acgtcgttaa cccagattca gcagctggcc gaccgctatc ttatctggca ggtgattttg
     6781 ccgttggttg gcgtctggtg ttatctgctg gacggcatgt ttataggcgc aacgcgcgca
     6841 gccgaaatgc gtaacagtat ggcggtggcc gccgcaggtt ttgcgttgac gctccttacg
     6901 ctgccgtggc tgggtaatca tgctttgtgg ctggcgttaa ccgtctttct ggcgttgcgc
     6961 gggctttctc tggcggctat ctggcggcgt cactggcgca acggtacctg gtttgccgca
     7021 acgtgacggt taaaaattct gaataaataa tcctaagcca aattgctgac tacacttaat
     7081 ctcacgttca gaagaaaagt gaacgtactc tcattcacaa cctaacgatg aggtcttgat
     7141 tatgaataaa gatgaagccg gcggtaactg gaaacagttt aaaggtaaag tgaaagagca
     7201 atggggcaaa ctgaccgatg atgatatgac gatcattgaa ggtaaacgtg atcaactggt
     7261 cggtaaaatc caggaacgtt atggttatca gaaagatcag gcagaaaaag aggtcgtgga
     7321 ttgggaaacc cgcaatgaat atcgctggta attaatccct cctgcccgac gtgtacaagg
     7381 atgtacgccc tcttaacgcg gtttcttttt cacctgcaca gagtgatcat gctggcactg
     7441 ttcaggatga cgacacgctt ccacttccac gcatgccgca cagagcccat gtgcttcaat
     7501 cacattatgc cgcagggcaa accccatttt tgccgccagc gtatgcatga tgtcttccac
     7561 gccttctgca cactcttctt tcactgcgcc gcagcgatcg caaataaaca tggctgaagt
     7621 atgggtggac tggtcgaaca gatgacagag cacataactg ttggtggatt ccaccttatg
     7681 cacaaaacct tgctcaagca gaaaatccag cgcgcgataa accgttggcg gcttggcttg
     7741 cggttcagct tcgcgcagta aatcaagcag atcataagcg ctgatagcgc catcctgcag
     7801 actcatcagg cgcaacactt ccaggcgctg tggggtcagg cgcacattac gctgcgcgca
     7861 gattttttca gcctgcgcta ataactcctg cgttgtggtc ttttccatcg ggcacctcaa
     7921 agtgggggtt aagaatgtcc ttactttacc atgttccagg aaaaacaccg agaaccctta
     7981 ttgttgccgt aatgttgatt ttctgttttg taggtaaggt gttatgttgc cttg
//
LOCUS       DADMHC010000177         8005 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.180, whole genome shotgun sequence.
ACCESSION   DADMHC010000177 DADMHC010000000
VERSION     DADMHC010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8005)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8005)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8005
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.180"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(1..1046)
                     /locus_tag="JNZ57_003294"
                     /pseudo
     CDS             complement(1..1046)
                     /locus_tag="JNZ57_003294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416677.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
     gene            complement(1269..1841)
                     /gene="yeiP"
                     /locus_tag="JNZ57_003295"
     CDS             complement(1269..1841)
                     /gene="yeiP"
                     /locus_tag="JNZ57_003295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007750416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P-like protein YeiP"
                     /protein_id="HAY8829397.1"
                     /translation="MPRANEIKKGMVLNCNGKLLLVKDIDIQSPTARGAATLYKMRFS
                     DVRTGLKVEERFKGDDIVDTVTLTRRYVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEE
                     ELLFMPEGGMPDMQVLTWDGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLST
                     GLVIQVPEYLSPGEKIRIHIEERRYMGRAD"
     gene            1996..2217
                     /locus_tag="JNZ57_003296"
     CDS             1996..2217
                     /locus_tag="JNZ57_003296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HAY8829398.1"
                     /translation="MECRPGCGACCTAPSIFSPIPGMPDGKPANTPCIQLDEQQRCKI
                     FTSPLRPKVCAGLQASAEMCGNSRQQAMT"
     gene            complement(2247..3428)
                     /gene="setB"
                     /locus_tag="JNZ57_003297"
     CDS             complement(2247..3428)
                     /gene="setB"
                     /locus_tag="JNZ57_003297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar efflux transporter SetB"
                     /protein_id="HAY8829399.1"
                     /translation="MHNSPAVSSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTD
                     EVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWN
                     RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGP
                     PLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMQKELPLATGTVEAPRRNRRDT
                     LLLFVICTLMWGSNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFA
                     KRLGKRFLMRVAAVGGVCFYAGMLMAHSPAILLGLQLLNAIFIGILGGIGMLYFQDLM
                     PGQAGSATTLYTNTSRVGWIIAGSVAGIVAEIWNYHAVFWFAMVMIIATLFCLLRIKD
                     V"
     gene            3796..4926
                     /locus_tag="JNZ57_003298"
     CDS             3796..4926
                     /locus_tag="JNZ57_003298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused PTS fructose transporter subunit IIA/HPr
                     protein"
                     /protein_id="HAY8829400.1"
                     /translation="MFQLSVQDIHPGEKAGDKEEAIRQVAAALVQAGNVAEGYVNGML
                     AREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVFQFPEGVTWGDGQVAYVAIGIAAS
                     SDEHLGLLRQLTHVLSDDSVAEQLKSATTAEELRALLMGEKQSEQLKLDNEMLTLDIV
                     ASDLLTLQALNAARLKEAGAVDATFVTKAINEQPLNLGQGIWLSDSAEGNLRSAIAVS
                     RAANAFAVDGETAAMLVSVAMNDDQPIAVLKRLADLLLDNKADRLLKADAATLLALLT
                     SDDAPTDDVLSAEFVVRNEHGLHARPGTMLVNTIKQFNSDITVTNLDGTGKPANGRSL
                     MKVVALGVKKGHRLRFTAQGADAEQALKAIGDAIAAGLGEGA"
     gene            4926..5864
                     /gene="fruK"
                     /locus_tag="JNZ57_003299"
     CDS             4926..5864
                     /gene="fruK"
                     /locus_tag="JNZ57_003299"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HAY8829401.1"
                     /translation="MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGIN
                     VAKVLKDLGIDVTVGGFLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGE
                     VTDFNFSGFEVTPADWERFVTDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQ
                     CPCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIA
                     HVVISLGAEGALWINASGEWIAKPPSVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLR
                     LATAVAALAVSQSNVGITDRPQLAAMMARVDLQPFN"
     gene            5881..7572
                     /gene="fruA"
                     /locus_tag="JNZ57_003300"
     CDS             5881..7572
                     /gene="fruA"
                     /locus_tag="JNZ57_003300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIBC"
                     /protein_id="HAY8829402.1"
                     /translation="MKTLLIIDANLGQARAYMAKTLLGAAARKAKLEIIDNPNDAEMA
                     IVLGDSIPNDSALNGKNVWLGDISRAVAHPELFLSEAKGHAKPYTAPVAATAPVAASG
                     PKRVVAVTACPTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAAAD
                     LVIVAADIEVDLAKFAGKPMYRTSTGLALKKTAQELDKAVAEATPYEPAGKAQTATTE
                     GKKESAGAYRHLLTGVSYMLPMVVAGGLCIALSFAFGIEAFKEPGTLAAALMQIGGGS
                     AFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSTGSGFIGGIIAGFLAGYIAKLIS
                     TQLKLPQSMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQTMGTANAV
                     LLGAILGGMMCTDMGGPVNKAAYAFGVGLLSTQTYGPMAAIMAAGMVPPLAMGLATMV
                     ARRKFDKAQQEGGKAALVLGLCFISEGAIPFAARDPMRVLPCCIVGGALTGAISMAIG
                     AKLMAPHGGLFVLLIPGAITPVLGYLVAIIAGTLVAGLAYAFLKRPEVDAVAKAA"
BASE COUNT         1974 a         1965 c         2188 g         1878 t
ORIGIN      
        1 atattgtgtt aaatcgacat ctttaatttg tagtgtcggc gcttgctcat tcagcattaa
       61 tgttctggcg gcatggcgaa atgcgcgatc ctgcatgcaa tcactgatat gggcgaatcc
      121 tgaaaggtaa cccagataag cgagaaaaga gtggctgcca ttaagcatac gcagtttcat
      181 ctcttcccat ggcaggacac attcaccatt tgtacacctg cgacttccca ggcaggacgc
      241 ccagcgacga agttatcttc caccacccac tggataaacg gttcgcagct aatcgcgcag
      301 ggatcattta cccccagatg ctggctgatt tctgccagtg attcgtcggt tgcagccgga
      361 acaatgcggt cgaccatggt tcccggaaaa ctgacgtgtt cttttatcca cccggcgagt
      421 tctggcgaac gtttttctgc cattcccagc accgcgtttt tcaccacatg gccattgtcg
      481 ggaatattgt cgcaggagag cacggtaaac ggtgtaaggc cgcgctcacg gcggcgtttc
      541 agtgcttcga cgagaatacc cggtgcggag tgaggttctt caggggtttg tagatcgtga
      601 ataatccgcg gattactggt gtcgagtgca ccggtggccg ggtcaataca atagcctttt
      661 tcggtaatcg tcagggaaac aattgtcacc tgtggctcgc aaaatttctc aataattgcc
      721 gctaaggaat ccagttttgc attaaggcat tcgtgaacgg caccgacaat tatcacctga
      781 ttgccgtccg cacctttctc cagcacggta tataaatggt tctgtgcgcg gagctggctc
      841 atcagttgat caccgctgaa caagctgatt tcacagatcc cccagtcgcc gccctgggca
      901 ttcagcacac gatcggtcag taacgcctga tgagcgcggt gaaaggcgcc aaagccaaaa
      961 tgaacgatac gtgattgcaa ctgctggcga tcgtagcgtg gagcgtgtac atgatgcggg
     1021 agcgtaacgg aggcaattgt cttcatagga gtcacgtctt agtaacgata aattaacaat
     1081 gacagtgtaa agttatatga cagcaattga aattggtctg gattgttaat gcgatgaagt
     1141 gtgagggcga tcaatcaacg agtgaaaatt gagggcgtaa ggtgttcagg aagcgcaaaa
     1201 tagaagattg gtataataaa ttaaaaaagg gacagcctga gctatccctt ttctgcatgc
     1261 ggctgaagtt agtcagcacg ccccatataa cggcgttctt cgatatggat acgaattttt
     1321 tcgcccgggc ttaagtattc tggtacctga atcaccagac cagtgctcaa tgtcgccggt
     1381 ttgttacggg cgctggcaga tgcccctttg atgcctggtg cggtttcaac gatttccaga
     1441 tcaacggtct gcggcagctc aagcgccagc agttgaccgt cccaggtcag cacctgcatg
     1501 tccggcatgc cgccctctgg cataaacagc aactcttctt caatctgatc tttggtgaag
     1561 gtatacgggg tatagtcttc tttatccata aagacatatt cgttgccatc gacataggag
     1621 aagtcaacgt aacggcgggt cagcgtcacg gtgtcaacga tatcatcacc tttgaaacgc
     1681 tcttctactt tcagcccggt acggacatca gaaaaacgca ttttgtacag cgtagcggca
     1741 ccgcgggcag tgggcgactg aatatcaata tccttaacca gcagcagttt gccgttgcaa
     1801 ttcagtacca tacctttttt aatttcgttc gctcttggca tcgaaaaatt cctgtagtcg
     1861 aaaatgtcaa aaatatcgcg acaaagtact cgcgacgggc ctttcgggca agtggtattc
     1921 gcacttttgc tggtgcaaaa aaggtggtac tgtgcgcgct catcaatccg gtggttaacc
     1981 ttaagagaac aacgtatgga atgccgtccg ggttgcgggg cgtgttgcac tgccccttca
     2041 attttcagcc ctattcccgg tatgccagat ggcaagcccg ccaatacgcc ctgcattcag
     2101 cttgatgaac agcaacgctg taaaattttc acctcgccac tgcgaccgaa agtctgtgca
     2161 ggcttacaag ccagcgctga aatgtgcggt aactcgcgtc agcaggccat gacctagctt
     2221 atcgatctgg aaatgctgac cgcgtcttaa acatctttaa tccgcagtaa gcaaaacaga
     2281 gtggcgataa tcatcaccat cgcaaaccag aacacagcgt gataattcca gatctcggcg
     2341 acgatgcccg ccactgatcc tgcgatgatc cagcccacgc gcgacgtgtt ggtatagagc
     2401 gtggtggctg aacctgcctg accgggcatc aaatcctgaa aatagagcat cccgatgccg
     2461 cccagaatgc caataaaaat agcatttagc agctgcaagc ccaacagaat ggcaggtgaa
     2521 tgcgccatca gcattcctgc gtaaaaacag acgccaccca cggcagcaac gcgcattaag
     2581 aaacgcttac ccagacgttt ggcgaaatat ccggcaatca acatcgtcgg gatttccagc
     2641 ccggcggcgg tccccatcat cacaccggcc agtttctcgg gaagatgcag ttcgttgata
     2701 ataaatagcg gcatgttgat gatgtacagg ctgttcgagc cccacatcaa tgtacaaatg
     2761 acaaacagca gtagcgtatc gcgacggtta cggcgcggcg cttcaaccgt gccggtcgcc
     2821 agcggaagct ctttttgcat cgacggtaaa aacagccaca ccatcacgcc gcaaacaata
     2881 aacgctaccg ctgcgctcag atacattacc gtaaagctga aacccatcgc taacgcataa
     2941 gccagcggtg ggccaatgac ccatgccagt gaaacctgag cgcgtaaaaa agagctgaac
     3001 atcaccgcct cacgtccggt tttgtcggca tgttcacggg caagggcaaa catttgcggg
     3061 ttagcggtcg agccaaagct gctaagaaag acgccaacga atagcaaaac aaagtagttg
     3121 cgattccagg caaaaagggt gcaggccagc acgcctaaca ggcagcaaaa gacaatcagc
     3181 gatttgcgat cgccgcgctt atcagagcgc ccagcgagaa actgacttac cagaatccca
     3241 atgacagcgc tgccggtaaa gaagaatccc accatcgccg gacgggcatg tacttcatcg
     3301 gtaaggaaaa tactgagtgt cggggtttgc agagcacccg caataccggt gagaaaggca
     3361 acgattaaaa acgccgtcga ggtcaggtca aacgatttcg cgctggagac tgcgggggag
     3421 ttatgcatgc aggtctatca ctggaagagg aagacgcgga gtttacgctg cttgtcagaa
     3481 aataaacaga cagcgaaatc aaaagcgcca cgaataatca aaatgccatt tcactgttgc
     3541 tgattggctg ctgacgctgc tgaaatgaaa ttgctgataa cggattttcc catcagcaat
     3601 taggaaaaat gacaaaaaaa tgtgcagcac atcaaacttt tgctcataac tttacggctt
     3661 tccttgcgtg ctgaaacaga agtattatgc tttcttgaaa cgtttcagcg cgatcttgtc
     3721 tttaacccta agccaggttg gcgctttttt tctcatagag gctgaatcgt ttcaattcag
     3781 caagagagga gaactatgtt ccagttatcc gtacaggaca tccatccggg cgaaaaggcc
     3841 ggagacaaag aagaggcgat tcgccaggtc gctgcggcgc tggtgcaggc cggtaatgta
     3901 gcagaaggct acgtcaatgg catgctggcg cgcgaacagc aaacctcaac gttcctcggc
     3961 aatggtattg ctattccaca cggcactacc gacacccgcg atcaggtgct gaaaaccggc
     4021 gttcaggtat ttcagttccc ggaaggcgtc acctggggtg atggtcaggt agcgtacgtg
     4081 gcaatcggta ttgctgccag ctcggatgaa catctgggcc tgctacgcca gctgacccac
     4141 gtactgagcg atgattccgt tgctgaacaa ctgaagtcag caacaacagc agaagaactt
     4201 cgcgcattac tgatgggcga aaagcagagt gagcagctga agctcgacaa cgaaatgctg
     4261 acgctggata tcgtcgccag cgatctgctg actcttcagg cgctgaacgc tgcgcgtctg
     4321 aaagaggcgg gggcagttga cgccactttc gtcaccaaag ccatcaatga acaaccgctg
     4381 aatctcggac agggtatctg gctgagcgat agcgccgaag gcaatctgcg tagcgcgatt
     4441 gcggtaagcc gtgcggcaaa tgcttttgct gtggacggcg aaacggcagc catgctggtg
     4501 agtgtggcga tgaatgacga tcagcccatc gcggttctta agcgtctcgc tgatttattg
     4561 ctcgacaata aagctgaccg cttgctgaaa gcagatgcgg caacgttgct ggcgctgctg
     4621 accagcgatg atgcgccgac cgacgacgtg ttaagcgcgg agtttgtggt gcgcaatgaa
     4681 cacggcctgc atgctcgtcc aggtaccatg ctggtcaata ccattaaaca atttaacagt
     4741 gatattaccg tgacaaacct tgatggcacc ggcaaaccgg caaacggacg tagtctgatg
     4801 aaagttgtgg cacttggcgt taagaaaggt catcgcctac gctttaccgc ccagggtgca
     4861 gatgctgaac aggcgctgaa agccattggc gacgctatcg ctgctggtct tggggagggc
     4921 gcataatgag cagacgtgtt gctacgatca cccttaatcc ggcttatgac cttgttggtt
     4981 tctgcccgga aattgaacgc ggcgaagtga acctggtgaa aaccaccggt ctgcatgcgg
     5041 cgggtaaagg catcaacgtg gccaaagtat taaaagacct gggaattgat gtcaccgttg
     5101 gcggcttcct gggtaaagac aatcaggatg gttttcagca actgttcagc gagctgggca
     5161 ttgccaaccg tttccaggtt gtacaggggc gcacccgaat taacgttaag ctgacggaaa
     5221 aagacggcga agtgaccgac ttcaacttct cgggttttga agtcaccccc gccgactggg
     5281 aacgctttgt gactgattct ctgagctggc tcggtcagtt cgatatggtc tgtgtcagcg
     5341 gaagcttacc gtcaggcgtc agcccggaag cgttcaccga ctggatgact cgcctgcgta
     5401 gtcagtgtcc ttgcattatc tttgatagta gccgtgaagc gttagtagca ggtttgaaag
     5461 cggcaccgtg gctggtgaaa cctaaccgcc gcgagttgga aatctgggca ggccgtaaac
     5521 tgcctgaaat gaaagatgtg attgaagctg cacatgcgct acgtgaacaa ggtattgcgc
     5581 atgttgttat ttcactgggt gccgaaggcg cgctttggat taatgcctcc ggcgaatgga
     5641 tcgccaaacc accgtcagtc gatgtcgtaa gcaccgttgg cgcaggggat tctatggttg
     5701 gtggcctgat ttatggcttg ctgatgcgtg aatccagtga acacacactg cgtctggcga
     5761 cagctgttgc agccctggcg gtaagtcaaa gcaatgtggg tattaccgat cgtccgcagt
     5821 tggccgcaat gatggcgcgc gtcgacttac aaccttttaa ctgacagcag gagaggcata
     5881 atgaaaacgc tgctgattat tgacgctaat ctcggtcagg cacgcgccta tatggcgaag
     5941 accctgctgg gcgcggcggc gcgaaaagca aaactggaaa tcatcgacaa tccgaacgac
     6001 gcagaaatgg cgattgttct cggtgattcc atcccgaatg acagcgcgct gaacggtaaa
     6061 aatgtctggc tgggtgatat ttcccgggca gttgcgcacc ctgagctgtt cctgagtgaa
     6121 gccaaaggcc atgcgaaacc ttacactgcg ccggtcgctg cgacagcacc ggttgctgcc
     6181 agcggtccga aacgcgtagt tgcggtgact gcttgcccga ctggcgtagc acacaccttt
     6241 atggcggctg aagccattga aaccgaagcg aaaaaacgtg gctggtgggt gaaagttgaa
     6301 acccgtggtt ctgttggcgc gggcaatgca atcacccctg aagaagtcgc agcagcggat
     6361 ctggtgattg tggcggcaga tatcgaagtg gatctggcga aatttgctgg taaaccgatg
     6421 tatcgtacct ctaccggtct ggcgctgaag aaaaccgcgc aggaactgga taaagcggtt
     6481 gctgaagcaa cgccgtatga accggcgggc aaagctcaaa cggcgaccac tgaaggtaag
     6541 aaagagagtg caggcgctta ccgtcacttg ctaacaggcg tctcttatat gctgccgatg
     6601 gtcgtcgcag gtggtctgtg tatcgcgctt tcttttgctt ttggtatcga agcgtttaaa
     6661 gagccgggta cgttggcagc ggcgctgatg cagattggcg gtggttcagc ctttgcgctg
     6721 atggtgccgg tactggcagg ttatattgcc ttctccattg ccgatcgtcc gggcctcacg
     6781 ccgggtctga ttggcggtat gctggcggtc agcaccggtt ctggctttat tggcggtata
     6841 attgctggct tcctggctgg ttacattgcg aagttaatca gtacgcaact gaaactgcca
     6901 cagagtatgg aggcgctgaa accgatcctg atcattccgc taatttccag tctggtggtc
     6961 ggtctggcga tgatctacct gatcggtaaa ccagttgctg gcattctcga agggctgact
     7021 cactggctgc agaccatggg gactgcgaat gcggttctgc tgggggcgat cctcggtggc
     7081 atgatgtgta ctgacatggg cggtccggta aacaaagcag cgtacgcatt cggtgtgggt
     7141 ctgctgagta ctcaaaccta tggcccgatg gcggcgatta tggcggcagg tatggtgcca
     7201 ccgctggcaa tgggtctggc aacaatggtg gcgcgtcgca aattcgacaa agcgcagcag
     7261 gaaggtggca aagccgctct ggtattggga ctgtgcttca tttcggaagg tgcaattccg
     7321 tttgctgctc gtgatccgat gcgtgtgctg ccgtgctgta tcgtgggtgg ggcgctgact
     7381 ggcgcaatct caatggcgat tggtgcgaaa ctgatggcac cgcacggtgg tctgtttgtt
     7441 ctgctgatcc ctggcgctat tacgccggta ctgggttacc tggtagcaat tattgccggt
     7501 acgctggtgg cgggtttggc ctatgccttc ctgaaacgtc cggaagtgga cgcagtagcg
     7561 aaagcagcgt aataaaaggt gtgttacagg gcagaaattt cctgccctgt aacatttgat
     7621 gagcgcaaag agaatgaccg gtttgtgaat gtaattttat gaatttaaat ggttttatct
     7681 ttcagtagaa acttgaaacg ttcatcaaac actaaggtta tttcctcaag ggcagattat
     7741 tttctgcctt ttttattgtt cccgttctgt gcatcccgtc acaaattcct cgcttttgta
     7801 attcaggcat ttaatcgcat tttgtgagcc tgctcaaatc tgcccatttt gcctctctgg
     7861 cggtaattta ctttacgtaa aacatgcatg ctatgagcac atgtttaaat atgaacacat
     7921 gtttaaaccg tctttgcagt atctatattc ttgtggattg acagggttgg taatttttta
     7981 ccagaggatg tgctatgcgc gaaaa
//
LOCUS       DADMHC010000178         7860 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.181, whole genome shotgun sequence.
ACCESSION   DADMHC010000178 DADMHC010000000
VERSION     DADMHC010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7860)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7860)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7860
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.181"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            140..1738
                     /locus_tag="JNZ57_003301"
     CDS             140..1738
                     /locus_tag="JNZ57_003301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-dependent transcriptional regulator"
                     /protein_id="HAY8829403.1"
                     /translation="MRKTVAFGFVGTVLDYAGRGSQRWSKWRPTLCLCQQESLVIDRL
                     ELLHDARSCSLFETLKRDIASVSPETEVVSIEIELHNPWDFEEVYACLHDFARGYKFQ
                     PEKEDYLIHITTGTHVAQICWFLLAEARYLPARLIQTSPPRKKEQPRGAGEVTIIDLD
                     LSRYNAIASRFAEERQQTLDFLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTG
                     AGKSFLARRIFELKQARHQFSGAFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREG
                     LLRSANGGMLFFDEIGELGADEQAMLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDL
                     RQLVAEGKFREDLYARINLWTFTLPGLRQRQEDIEPNLDYEVERHATLTGDSVRFNTE
                     ARRAWLAFATSPQATWRGNFRELSASVTRMATFATSGRITLDVVEDEINRLRYNWQES
                     RPSALTALLGAEAENIDLFDRMQLEHVIAICRQAKSLSAAGRQLFDVSRQGKASVNDT
                     DRLRKYLARFGLTWEAVQDQHSSS"
     gene            complement(1720..2478)
                     /locus_tag="JNZ57_003302"
     CDS             complement(1720..2478)
                     /locus_tag="JNZ57_003302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000815090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family transcriptional regulator"
                     /protein_id="HAY8829404.1"
                     /translation="MKQTQRHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELA
                     EQNLILRHHGGAALPSSSVNTPWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIGTT
                     PEAVAHALLNHSNLRIVTNNLNVANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFI
                     SQFRLDFGILGISGIDSDGSLLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVN
                     MGSISMVDAVYTDAPPPVSVMQVLTDHHIQLELC"
     gene            complement(2495..3325)
                     /gene="glpG"
                     /locus_tag="JNZ57_003303"
     CDS             complement(2495..3325)
                     /gene="glpG"
                     /locus_tag="JNZ57_003303"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease
                     GlpG"
                     /protein_id="HAY8829405.1"
                     /translation="MLMITSFANPRVVQAFVDYMATQGVILTIQQHNQSDVWLADESQ
                     AERVRAELARFLENPADPRYLAASWQAGHTGSGLHYRRYPFFAALRERAGPVTWVVMI
                     ACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWY
                     LGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERD
                     PQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLNARKRK
                     "
     gene            complement(3370..3696)
                     /gene="glpE"
                     /locus_tag="JNZ57_003304"
     CDS             complement(3370..3696)
                     /gene="glpE"
                     /locus_tag="JNZ57_003304"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase GlpE"
                     /protein_id="HAY8829406.1"
                     /translation="MDLFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLT
                     NDTLGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPA
                     EVAYGA"
     gene            3886..5391
                     /gene="glpD"
                     /locus_tag="JNZ57_003305"
     CDS             3886..5391
                     /gene="glpD"
                     /locus_tag="JNZ57_003305"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HAY8829407.1"
                     /translation="METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSA
                     SSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIR
                     IGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVV
                     RKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDEGM
                     HLPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYK
                     GDPKAVKIEESEINYLLKVYNAHFKKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDY
                     TLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIE
                     GDRDDYAARLRRRYPFLTESLARHYARTYGSNSELLLGNAGAISDLGEDFGHEFYEAE
                     LKYLVDHEWVRRTDDALWRRTKQGMWLNADQQSRVSQWLVEYTQQKLSLAS"
     gene            complement(5443..6048)
                     /locus_tag="JNZ57_003306"
     CDS             complement(5443..6048)
                     /locus_tag="JNZ57_003306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000589351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829408.1"
                     /translation="MIRFRLYIPPVILGFVIVSLLVWLTVIVLAVLIFTLTFLAEIIF
                     SFPLLVVRISLQELQLELIVEYALFFSVMAGIGWQFSRRTPPELKNRLHCWLVFSPVY
                     FWLILSNFILYISPEKSALLENIRNFFLTFVWPPLNFSPFWPQPWTDFVGPISAQLGF
                     ALGYYCHWCRKNRNQRKKWGDWVTCLSLAILAQGPLFNYLQ"
     gene            complement(6051..6818)
                     /locus_tag="JNZ57_003307"
     CDS             complement(6051..6818)
                     /locus_tag="JNZ57_003307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001182130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829409.1"
                     /translation="MQPSPAMQALIEQIYHTFRRYRVPQKFVVCCEYCLSQQEQKALR
                     STSLRAIPYSLINAWNSSPGPDPQNSDEVRYFLPRLLEFVAQGHFDNIHVVFSLRRIN
                     LANKENWRADERAILQRFACQYMTDWVSGDEAVELQYMLEMFFRADIALAPLLDAINS
                     VPGFWSTVSLACLLNRYCEDYIRDNQDDIDNVITTQINAWARNNHPLLKERARQAIEN
                     PLKQPEPMTEYQVWEDDWIIDECLCAMYDASSESPGK"
     gene            complement(6821..7531)
                     /locus_tag="JNZ57_003308"
     CDS             complement(6821..7531)
                     /locus_tag="JNZ57_003308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000424214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829410.1"
                     /translation="MELVNTLFASLAGTDPFTGVDITIANCKSAYWDEGIVQQLINQA
                     LDEGEKFVGADGLEGLLRYDVTLNIGLTSSKVWPGFSLDTATISRLCACGADFGFDPY
                     ISDVPDVQCDLNTTNDVTVQFTAMLNPDERVIIAKRPLKKCDSWIEDVYIFQVFKDAW
                     KFHNNNSLRGFRDKQAALKLYTRHYSVENCAEESCRDCNSCIRPSFSLSRSALIRLNA
                     ANARFVYQPFTRDQRARG"
     gene            complement(7547..>7860)
                     /locus_tag="JNZ57_003309"
     CDS             complement(7547..>7860)
                     /locus_tag="JNZ57_003309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001472437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PstS family phosphate ABC transporter
                     substrate-binding protein"
                     /protein_id="HAY8829411.1"
                     /translation="MMEGMIKVVAEYRNTNNAIGYTFRYYATQMNADKNIKLLAINGI
                     APTAENIRNGKYPYIIDAFMVTRENTTSETQKLLEWFLTPQGQSLVEDVGYVPMYKTL
                     P"
BASE COUNT         2020 a         2009 c         1952 g         1879 t
ORIGIN      
        1 tgccagaaaa ttaaataagt aaattaattt tttaattcat tgtttttaaa aagattatat
       61 ctttatgtcc gtaaccggag atttcccgca aagccgattt accgataatg aaatatcgtc
      121 ttttataagg atatctaaga tgcgtaaaac agtagctttt ggctttgtcg gaacggtgct
      181 ggattatgcc gggcgcggca gtcagcgctg gtcaaaatgg cgtccgacac tctgtttatg
      241 ccagcaagaa tcgttggtca tcgatcgact ggaattattg catgacgccc gctcgtgctc
      301 gctatttgaa acgcttaaac gcgatatcgc cagcgtttcg ccagaaacag aagtggtgag
      361 cattgagatt gaactgcata acccgtggga tttcgaagag gtttacgcct gcctgcatga
      421 tttcgcccgt ggttacaagt ttcagccaga aaaagaagac tatttaattc acatcaccac
      481 cggcacccac gtcgcgcaga tttgctggtt tctgctggcg gaagcgcgtt atctacccgc
      541 ccggttgata caaacttcac caccgcgcaa aaaagaacaa ccgcgcggtg ccggtgaagt
      601 gacgattatc gatctcgatc taagccgtta taacgccatc gccagccgct ttgccgagga
      661 acgccagcaa acgcttgatt ttcttaagtc cggcattgcc acgcgtaacc cccacttcaa
      721 ccgcatgatt gagcagattg aaaaagtggc gattaaatcc cgcgcaccga tcctgcttaa
      781 cggcccaacc ggtgcgggaa agtcatttct ggcgcgacgt atatttgaat taaaacaggc
      841 gcggcatcag tttagcggcg cgtttgtgga agtgaactgc gccaccctgc gcggcgatac
      901 cgccatgtcg acgctgtttg gtcatgtgaa aggcgcgttt accggggcgc gggaatctcg
      961 tgaaggttta ttacgcagcg ccaacggcgg aatgttgttt tttgatgaga ttggcgaact
     1021 gggcgcagac gaacaggcaa tgctgctaaa agccattgaa gagaaaacct tttacccgtt
     1081 tggcagcgat cgccaggtga gcagtgattt tcagcttatc gccggaacgg tgcgcgattt
     1141 gcgccagctg gttgccgaag gcaaatttcg cgaagatctg tacgcgcgga tcaatctctg
     1201 gaccttcacc ctgccgggtc tacgccagcg ccaggaagat attgaaccga accttgatta
     1261 tgaagtggag cgccacgcca cactcactgg cgacagcgtg cgttttaaca ccgaagcgcg
     1321 gcgcgcctgg ttggcttttg cgacctctcc ccaggcaaca tggcgcggta actttcgcga
     1381 actttctgcc agcgtcacgc ggatggccac ctttgccact agcggacgca tcactctgga
     1441 cgtggttgaa gatgagataa accgtctgcg ctataactgg caggagagcc gcccctccgc
     1501 gcttacggcg ttgctgggcg cagaggcaga aaacatcgat ctcttcgacc gtatgcaact
     1561 ggaacacgtt atcgctatct gccgccaggc aaagtcgctt tctgcagccg gacgacagct
     1621 ttttgatgtt tcgcgccagg gcaaagccag cgtcaatgac acggatcggc tacgcaaata
     1681 cctggcgcgt tttggtctga cgtgggaagc cgtgcaggat cagcacagct ccagttgaat
     1741 atgatggtcc gtcagcacct gcattacgct tactggcggc ggggcgtcgg tgtagacggc
     1801 atctaccatg ctgatgctgc ccatattgac catcgcgtta cggccaaatt tcgagtgatc
     1861 gacaaccagc ataacgtggc gcgagttctc aataatggcg cgcttggtgc gaacttcgtg
     1921 gtaatcgaac tccagcagcg agccgtcgct atcgatgccg cttatcccca gaatgccgaa
     1981 atcaaggcgg aactgggaga taaaatcgag cgtcgcttcg ccaatgatcc cgccatcgcg
     2041 gctgcgtaat tcgccaccgg cgagaataat gcggaaatct tcttttacca tcaacgtgtt
     2101 agcaacattg agattgttgg tgacaatacg caaattgctg tgattaagca gcgcgtgcgc
     2161 caccgcttcc ggcgtggtgc cgatatcgat aaacagtgtc gagccgttgg ggatttgctc
     2221 cgccactttg cgggcaatcc tctctttttc ttcggtctgg gtggctttgc gatcgtgcca
     2281 cggcgtgtta accgaactgg aaggcagcgc cgcaccgcca tggtgacgca ggatcaggtt
     2341 ttgctccgcc agctcattga ggtcgcggcg aatagtctgc gggctgacgg agaaatgctc
     2401 taccagctct tcagtactga cataaccctg ctgtttaacc agttcgataa taccgttgtg
     2461 acgttgtgtt tgtttcattt ataaatccct ggaattattt tcgttttcgc gcattgagcg
     2521 aatcaacaaa agccatcgct aaacccacgg ctaacccggc gatgtgtgct ccgttcgcca
     2581 tcgacatccc aaacaaatca aaccatccgg cgacaatcca gatcagcgca aagataatta
     2641 acccacgttg caggtaaatg ccactttgcg gatcgcgctc accacgtagc cagacgtagc
     2701 ccatcagcgc atacaccacg ccagaaagcc cgccaaacca cggcccgctg aatttttgct
     2761 gcacatagcc gcttaacagg gcgctaatga gagtaataac aattagctta ccgctaccga
     2821 ggcgtttttc caccgcaccg ccgagatacc accaccagag caggttaaag aggatatgca
     2881 tcagcgagaa gtgcattaac gcgtgggtga agtaacgcca gaactcaaat ttcagtgttg
     2941 gatcgaatgg ccaggccagc cataacatca cttcctgatc gccgagaatt tgcatggcga
     3001 taaacaccac cacgcaggcg atcatcacca cccaggttac cggacctgcg cgttcacgca
     3061 aggcagcaaa gaaaggataa cggcgataat gcagaccact gccggtatgg cccgcctgcc
     3121 agctggccgc cagataacgc ggatctgccg ggttttcgag aaaacgcgcc agctccgccc
     3181 gcacgcgctc ggcctgggac tcatccgcca gccagacatc gctttggtta tgttgttgaa
     3241 tcgtaaggat aacaccctgc gtcgccatgt aatcaacaaa cgcctgcacc acgcgggggt
     3301 tagcaaaaga ggtaatcatc aacatcgttg ctgtcgctta ttccacacaa aaggggacag
     3361 tataaagcgt tacgcgccgt acgccacctc tgcgggaaac tgacgctgcc aggcttcaaa
     3421 accgccgtca atgctataga ccacatcgta gccctgttgc agcagatact gcgccgcgcc
     3481 tttgctacta ttgccgtgat aacacatcac catcaccgga gtgtcaaagt cgttatcacg
     3541 cataaacgcg cccagcgtgt cgttggttaa atggaaagcc tgcaccgcat gtcccattgc
     3601 gaaactctgt ggatcgcgaa tatcgaccag caccgcctct ttttcctgca acttctggtg
     3661 cgcgtcggca acgttaatac attcgaacag atccatgcgt ctctctttct ttacaaacaa
     3721 gtgggcaaat ttaccgcaca gtttacgtcg aagcggcaga taaacgccat aatgttatac
     3781 atatcactct aaaatgtttt ttcaatgtta cctaaagcgc gattctttgc taatatgttc
     3841 gataacgaac atttatgagc tttaacgaaa gtgaatgagg gcagcatgga aaccaaagat
     3901 ctgattgtga taggtggcgg catcaatggt gctggtatcg cggcagacgc cgctggacgc
     3961 ggtttatccg tgctgatgct ggaggcgcag gatctcgctt gcgcgacctc ttccgccagt
     4021 tcaaaactca ttcacggtgg cctgcgctac cttgagcact atgaattccg cctggtcagc
     4081 gaggcgctgg ctgaacgtga agtgctgctg aaaatggctc cgcatatcgc cttcccaatg
     4141 cgttttcgcc tgccacatcg tccgcatctg cgcccggcgt ggatgattcg gattggtctg
     4201 tttatgtacg atcatctggg taaacgcacc agcctgccgg gatcaaccgg tttgcgtttt
     4261 ggcgcaaact cagtgttaaa accggaaatt aagcgcggat tcgaatattc tgactgttgg
     4321 gtagacgacg cccgtctggt actcgccaac gcccagatgg tggtgcgtaa aggcggcgaa
     4381 gtgcttactc ggactcgcgc cacctctgct cgccgcgaaa acggcctgtg gattgtggaa
     4441 gcggaagata tcgataccgg caaaaaatat agctggcaag cgcgcggcct ggttaacgcc
     4501 accggcccgt gggtgaaaca gttcttcgac gaggggatgc atctgccttc gccttatggc
     4561 attcgcctga tcaaaggcag ccatattgtg gtgccgcgtg tgcataccca gaagcaggcc
     4621 tacattctgc aaaacgaaga taaacgtatt gtgttcgtga tcccgtggat ggacgaattt
     4681 tccatcatcg gcaccaccga cgtagagtat aaaggcgatc cgaaagcggt gaagattgaa
     4741 gagagtgaaa tcaactatct gctgaaagtg tataacgcgc actttaaaaa acagcttagc
     4801 cgtgacgata tcgtctggac ctactccggt gtgcgtccgc tgtgtgatga tgagtccgac
     4861 tcgccgcagg ctattacccg tgattacacc cttgatatcc atgatgaaaa cggcaaagca
     4921 ccgctgctgt cggtattcgg cggtaagctg accacctacc gaaaactggc agaacatgcg
     4981 ctggaaaaac tgacgccgta ttatcagggt attggcccgg cgtggacgaa agagagcgtg
     5041 ctgccgggtg gtgccattga aggcgaccgc gacgattacg cagctcgtct gcgccgtcgc
     5101 tatccattcc tgactgaatc gctggcgcgt cattacgcac gcacttacgg cagcaacagc
     5161 gagctgctgc tcggcaatgc gggggcgata agcgacctcg gggaggattt cggtcatgag
     5221 ttctacgaag cggaactgaa atacctggtg gatcacgaat gggtccgccg caccgacgat
     5281 gccctttggc gtcgcacaaa acaaggcatg tggctgaatg cggatcaaca atctcgtgtg
     5341 agtcagtggc tggtggaata tacgcagcag aagttgtcgc tggcgtcgta aggatgatgc
     5401 ccggttgaag tgcaaccggg ctatttggat tccttagact attcattgta aataattgaa
     5461 taacggcccc tgagctaaaa tcgccaaact taagcacgtt acccaatcgc cccacttctt
     5521 cctctggttt ctattttttc tgcaccaatg gcaataatat cccaatgcaa aaccaagctg
     5581 tgcactaatc gggccgacaa aatcagtcca aggctgcggc caaaaagggg aaaaattcag
     5641 gggaggccag acaaacgtca gaaagaaatt tcggatattt tccagcaacg ctgatttctc
     5701 tggagaaata taaagaatga aattcgagag aattaaccag aaatagaccg gcgaaaagac
     5761 cagccagcaa tgcagtctgt tttttaattc aggaggcgtt ctgcgggaga attgccaacc
     5821 gatgccagcc attacactga aaaaaagtgc atattcaact attaactcaa gttgtaattc
     5881 ctgaagagaa atacgcacaa ccaggagcgg aaaggagaat attatttctg ccagaaaagt
     5941 taacgtgaat ataagtacgg ctaagacaat aaccgtcagc cataccaata atgacacgat
     6001 aacaaaaccg agaattacag ggggaatata aagccggaat ctaatcattt ttattttcct
     6061 ggtgattcgg atgatgcgtc atacatcgcg cataaacact catcaattat ccagtcatct
     6121 tcccagacct gatattctgt cattggttcg ggctgtttta gcgggttctc aatcgcttgc
     6181 cgcgctcttt ctttcagtaa aggatgatta tttctagccc aggcattgat ttgggtggta
     6241 atgacgttat cgatatcgtc ctggttatct ctgatataat cctcacaata tctgttcaat
     6301 aaacaggcaa gagaaacggt cgaccaaaag ccgggaactg aattaatggc atccagcaat
     6361 ggcgcaagag cgatatcggc acggaaaaac atttccagca tatactgtaa ttcgacagct
     6421 tcatcgccgg atacccaatc agtcatatac tggcaggcaa atcgctgtaa aattgcccgt
     6481 tcatccgcac gccagttttc tttgttggca aggttgatac ggcgcagaga aaaaactacg
     6541 tgaatattgt caaaatgccc ctgtgcaaca aattccagta aacgcggcag aaaatagcgg
     6601 acctcatcgc tattttgcgg atcaggccct gggctactat tccaggcatt gattaaggaa
     6661 tacgggatcg ctcgtaacga tgtactccgt aatgcctttt gttcctgctg actcaggcaa
     6721 tattcacaac aaaccacaaa tttctgcggc acccgataac gacgaaaggt gtgataaatc
     6781 tgctcaatta atgcctgcat ggcggggctg ggttgcatag ttaccccctc gcccgctgat
     6841 cgcgtgtaaa cggttgatag acaaaacgag cattcgccgc gttcaggcga ataagggcgc
     6901 tacgcgaaag ggaaaagctg gggcgaatgc aactattgca gtctcgacag ctttcctctg
     6961 cgcaattttc cactgagtaa tgacgcgtgt agagtttcag tgcggcctgc ttatcgcgaa
     7021 atccgcgtaa actgttattg ttatgaaatt tccaggcatc tttaaagacc tgaaagatat
     7081 agacatcctc aatccaggag tcacattttt taagcgggcg ctttgctatt atcacccgct
     7141 catccggatt tagcatcgcc gtaaattgta cggtgacgtc atttgtcgtg ttcaggtcac
     7201 attgaacatc tggtacatca ctgatatagg ggtcaaatcc aaaatcagca ccacaggcac
     7261 aaagacggct aatggtggcg gtatcgaggg aaaatcccgg ccatactttg ctggaggtta
     7321 agccaatatt taatgtgaca tcatatcgaa gcaatccctc aagaccgtca gcaccgacga
     7381 acttttcccc ttcatccagg gcctggttaa taagttgctg aacaatgcct tcatcccagt
     7441 atgccgattt gcagttggca atcgtaatat ccacgcctgt gaagggatca gtaccggcaa
     7501 ggcttgcaaa taatgtatta actaattcca tttttattat ccagctttaa ggtagcgtct
     7561 tatacatcgg gacataacct acatcttcca ccaaactctg tccctgcggc gttaaaaacc
     7621 actccaacaa tttttgtgtc tctgacgtcg tattttcccg cgttaccata aaggcatcga
     7681 tgatataggg atatttgccg ttgcgaatgt tttcggcagt cggtgcaata ccgttaatcg
     7741 ctagcagttt tatattttta tcggcgttca tttgtgttgc gtaataacgg aaggtgtaac
     7801 ctattgcgtt gtttgtatta cggtattcgg caacgacttt aatcattccc tccatcatac
//
LOCUS       DADMHC010000179         7846 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.182, whole genome shotgun sequence.
ACCESSION   DADMHC010000179 DADMHC010000000
VERSION     DADMHC010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7846
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.182"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            67..132
                     /locus_tag="JNZ57_003310"
     CDS             67..132
                     /locus_tag="JNZ57_003310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829412.1"
                     /translation="MYIFITHFFTEYVIFKYLLPI"
     gene            271..882
                     /gene="ruvA"
                     /locus_tag="JNZ57_003311"
     CDS             271..882
                     /gene="ruvA"
                     /locus_tag="JNZ57_003311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012131997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HAY8829413.1"
                     /translation="MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQE
                     AIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAV
                     EREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE
                     QEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL"
     gene            891..1901
                     /gene="ruvB"
                     /locus_tag="JNZ57_003312"
     CDS             891..1901
                     /gene="ruvB"
                     /locus_tag="JNZ57_003312"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017441950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HAY8829414.1"
                     /translation="MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIF
                     IKAAKLRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLT
                     NLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIIIGEGPAARSIKIDLPPFTLIGA
                     TTRAGSLTSPLRDRFGIVQRLEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARG
                     TPRIANRLLRRVRDFAEVKHDGTISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKF
                     FGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPE
                     MP"
     gene            complement(1951..2736)
                     /gene="znuB"
                     /locus_tag="JNZ57_003313"
     CDS             complement(1951..2736)
                     /gene="znuB"
                     /locus_tag="JNZ57_003313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter permease subunit ZnuB"
                     /protein_id="HAY8829415.1"
                     /translation="MIELLFPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLL
                     GVAFGLLLDVNPFYAVIAVTLLLAGGLVWLEKRPQLAIDTLLGIMAHSALSLGLVVVS
                     LMSNIRVDLMAYLFGDLLAVTPEDLIAIAIGVVIVVAILFWQWRNLLSMTISPDLAFV
                     DGVKLQRVKLLLMLVTALTIGVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAV
                     LVGMVAVTGGLTFSAFYDTPAGPSVVLCAALLFIISMMKKQAS"
     gene            complement(2733..3488)
                     /gene="znuC"
                     /locus_tag="JNZ57_003314"
     CDS             complement(2733..3488)
                     /gene="znuC"
                     /locus_tag="JNZ57_003314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter ATP-binding protein ZnuC"
                     /protein_id="HAY8829416.1"
                     /translation="MTSLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKS
                     TLVRVVLGLVTPDEGVIKRNGKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDIL
                     PALKRVQAGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVPLY
                     DLIDQLRRELDCGVLMVSHDLHLVMAKTDEVLCLNHHICCSGTPEVVSLHPEFISMFG
                     PRGAEQLGIYRHHHNHRHDLQGRIVLRRGNDRS"
     gene            3567..4499
                     /gene="znuA"
                     /locus_tag="JNZ57_003315"
     CDS             3567..4499
                     /gene="znuA"
                     /locus_tag="JNZ57_003315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein
                     ZnuA"
                     /protein_id="HAY8829417.1"
                     /translation="MLHKKTLLFAALSAALWGGATQAADAAVVASLKPVGFIASAIAD
                     GVTETEVLLPDGASEHDYSLRPSDVKRLQNADLVVWVGPEMEAFMQKPVSKLLGAKQV
                     TIAQLEDVKLLLMKSIHGDDDDHDHAEKSEEDHHHGDFNMHLWLSPEIARATAVAIHG
                     KLVELMPQSRAKLDANLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFG
                     LTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMG
                     TLDPLGTNIKLGKTSYSEFLSQLANQYASCLKGD"
     gene            4515..5837
                     /gene="mepM"
                     /locus_tag="JNZ57_003316"
     CDS             4515..5837
                     /gene="mepM"
                     /locus_tag="JNZ57_003316"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein DD-endopeptidase MepM"
                     /protein_id="HAY8829418.1"
                     /translation="MQQIARSVALAFNNLPRPHRVMLGSLTVLTLAVAVWRPYVYHRD
                     ATPIVKTIELEQNEIRSLLPEASEPIDQAAQEDEAIPQDELDDKIAGEAGVHEYVVST
                     GDTLSSILNQYGIDMGDITQLAAADKELRNLKIGQQLSWTLTADGELQRLTWEVSRRE
                     TRTYDRTAANGFKMTSEMQQGEWVNNLLKGTVGGSFVASARNAGLTSAEVSAVIKAMQ
                     WQMDFRKLKKGDEFAVLMSREMLDGKREQSQLLGVRLRSEGKDYYAIRAEDGKFYDRN
                     GTGLAKGFLRFPTAKQFRISSNFNPRRTNPVTGRVAPHRGVDFAMPQGTPVLSVGDGE
                     VVVAKRSGAAGYYVAIRHGRSYTTRYMHLRKILVKPGQKVKRGDRIALSGNTGRSTGP
                     HLHYEVWINQQAVNPLTAKLPRTEGLTGSDRREFLAQAKEIVPQLRFD"
     gene            5957..6928
                     /gene="lpxM"
                     /locus_tag="JNZ57_003317"
                     /gene_synonym="msbB"
     CDS             5957..6928
                     /gene="lpxM"
                     /locus_tag="JNZ57_003317"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416369.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HAY8829419.1"
                     /translation="MEMKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMVGIALTPPKFR
                     DPILARLGRFAGRLGKSSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMAMMAE
                     LAIRGPEKIQPRVDWQGLQIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAM
                     FHNQGNPVFDYVWNTVRRRFGGRLHARNDGIKPFILSVRQGYWGYYLPDQDHGPEHSE
                     FVDFFATYKATLPAIGRLMKVCRARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHT
                     IARRMNEEVEIFVGPRPEQYTWILKLLKTRKPGEIQPYKRKDLYPIK"
     gene            complement(7017..>7846)
                     /locus_tag="JNZ57_003318"
     CDS             complement(7017..>7846)
                     /locus_tag="JNZ57_003318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000281525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HAY8829420.1"
                     /translation="MTLIYHYNSSYLRFAFTLTQDSPRVDVQTFIDWHEPNVSLKVKF
                     PVSVQTSLAQCQIQFGVIDRPTHSDDSFAFAKDEIPAHHWVDLSDRETGIALIAKNKY
                     GYRVKDQTLELTLLRSQHKPGEVVKTDNYDNFLINNFADIGKQKFIFSLFPHHGDYRV
                     GGVINQAYIMNHPLQVVPVKPHPGELPPSLSFFAIDTNSVIIETIKLAEDGDGIIVRL
                     YESHGLEISAMLSWVCNYHYVQYVDLQENKLDDSFYCNQYCNLEFKPFEIITLRLTQ"
BASE COUNT         2100 a         1853 c         1976 g         1917 t
ORIGIN      
        1 tcattccatt gaaatagata cgaatatacg taatagcata aaaaaattat tttttcagga
       61 ggcgcaatgt atatttttat tacgcatttc ttcactgaat acgtaatatt taaatatttg
      121 cttccaatat aacctgtaga ataaatcata ctgcgccatt tttcagttca tcgagacacc
      181 tcgcaagttt tcttcatcct tcgctggata tctatccagc atttttttat catacagcat
      241 tatctttgat tcattacgca ggagcgtcat gtgataggca gactcagagg catcatcatt
      301 gaaaaacaac ccccgctggt gttaattgaa gtgggcggcg taggctatga agtgcatatg
      361 ccgatgacct gtttttatga actccctgaa gcgggtcagg aagcgatcgt tttcacccac
      421 tttgtggtgc gtgaagacgc gcaactgctg tacggtttta acaataaaca agagcgcaca
      481 ttgttcaaag agttgatcaa aaccaacggc gtcggcccga agttggcgct ggcgatcctc
      541 tccggaatgt cagcgcagca gttcgttaat gccgttgaac gtgaagaagt gggggcactg
      601 gtgaaactgc cgggtattgg caaaaaaacc gccgaacgct tgattgttga aatgaaagac
      661 cgatttaaag gtttgcatgg cgatctgttt accccggccg ccgacctggt actcacatca
      721 cctgccagcc cggcgaccga cgatgctgaa caggaagcgg ttgccgcgct ggtggcgctg
      781 ggctataaac cacaagaagc aagccgcatg gtgagcaaaa tcgctcgccc tgacgccagc
      841 agtgaaacat taattcgcga agccctacgc gccgcgttat gaggtaaagg atgattgaag
      901 cagaccgtct gatttctgcc ggtaccactt tgccggaaga tgtagcagat cgcgccattc
      961 gccctaaatt actggaagag tatgttggtc agccgcaggt tcgttcacag atggagattt
     1021 tcatcaaagc agcgaaactg cgcggcgatg ccctcgatca tttgttgatt tttggtcctc
     1081 cggggttggg taaaactacg cttgccaaca ttgtcgccaa tgaaatgggc gttaatttac
     1141 gcacgacttc tggtccggtg ctggaaaagg cgggcgatct ggcagcgatg ctcactaacc
     1201 ttgaaccgca tgacgtgctg tttattgatg agatccaccg tttatcgcca gttgttgaag
     1261 aagtgctgta tccggcaatg gaagactacc aactggatat cattattggt gaaggtccgg
     1321 cggcacgctc cattaaaatt gatttgccgc cgtttaccct gattggcgca accacgcgcg
     1381 caggttcgct gacatcaccg ttgcgcgacc gttttggtat tgtgcaacgt ctggagtttt
     1441 atcaggtgcc ggatctgcaa tatatcgtta gtcgcagtgc acgctttatg gggcttgaga
     1501 tgagtgatga cggcgcgctg gaagttgctc gtcgcgctcg cggtacgcca cgtattgcca
     1561 accgtctgct gcgtcgagtg cgtgatttcg ccgaagtgaa gcacgatggc accatctcgg
     1621 cagatatcgc tgctcaggcg ctggacatgt tgaatgtcga tgctgaaggt ttcgattata
     1681 tggaccgcaa attgttgctg gcggtaatcg ataagttctt tggtgggccg gtaggtctgg
     1741 ataacctggc ggcggctatt ggcgaagaac gtgaaaccat tgaggatgtg ctggaacctt
     1801 atttgattca gcaaggcttt ttgcagcgta caccgcgtgg gcgtatggcg acgacgcggg
     1861 cgtggaatca ctttggcata acgccgccag aaatgccgta agtcggattg gtcgctcgcg
     1921 ccgcatccga caaatgtgtt cagcgataga ttagctggcc tgctttttca tcatactgat
     1981 aataaataac agtgctgcac atagcaccac cgacggaccc gccggcgtat cgtaaaatgc
     2041 ggaaaaggtt aaaccgcccg ttacggcaac catccccacc aacacagcga cacctgccat
     2101 ctgttccggc gtgcgggcaa agcgacgtgc agtagcagca ggaataatca gcagtgaagt
     2161 aataatcaac gcgccaacaa atttcatcgc tacaccaatc gtcaatgccg tcaccagcat
     2221 caacaacaat ttcacgcgct gtaatttcac accatcaaca aacgccagat ccgggctaat
     2281 cgtcatcgac agcaaattgc gccattgcca gaacaaaata gccaccacga tgaccacgcc
     2341 aatcgcaata gcgatgagat cttctggcgt cactgccagc aaatcaccga acaggtaagc
     2401 catcaaatca acacgaatgt tagacatcag actaacgacc accaggccca gcgacagggc
     2461 actgtgcgcc ataatcccta ataacgtgtc aatcgccagc tgtggacgct tctccagcca
     2521 taccagaccg cccgccagga gcagcgtaac ggcaattacc gcatagaatg gattcacgtc
     2581 cagcaacaaa ccaaacgcga cgccaagtaa tgaggcatga gccagcgtat caccgaaata
     2641 agacatacga cgccagacta caaacgaacc cagcggaccc gcggcacagg cgagcatgat
     2701 cccggctaac caaccgggaa ataataattc aatcatgagc gatcatttcc ccgacgcaaa
     2761 acaattcgtc cctgtaaatc gtgacgatga ttatgatgat ggcgatagat acccagttgt
     2821 tcagcaccac gaggaccaaa catagaaata aactccggat gtagggaaac aacttccggt
     2881 gtgccggaac aacaaatgtg gtgattcaga cacagcactt catcggtttt tgccattacc
     2941 agatgcagat cgtgagagac cattaaaacg ccacaatcca gttcgcgacg caactggtca
     3001 ataaggtcat ataacggcac ctggccattt acatccacgc cttgagtggg ttcatccagc
     3061 actaataatt gcggtcgatt taacaatgct cgcgctaaca gtacacgctg tgtttcgcca
     3121 ccagagagct tttgcatcgg tgcgttaatc agatgcccgg cctggacacg tttcagtgca
     3181 ggcaaaatat cttctttatg tgtgccaggg cgtaagcgta aaaaacggtt tacggtcagt
     3241 ggcaacgtgg tgtcgagata cagcttctgc ggtacatagc cgatgcgtag ttttccgttg
     3301 cgcttgataa ccccttcatc gggtgttacc agcccgagca ctacccgtac cagtgtcgac
     3361 ttacctgcgc catttggccc aagtaaagtc aaaatttttc caggtttaag ttccagtgac
     3421 acatcagaga ggacgcggcg ttggccaaaa gaaaccgaga cattttccag ggaaaccaga
     3481 cttgtcatgt taattttagt cttgcagtag tcatgaaatg ttataatatc acacttctca
     3541 tattcattac gatgattggt cgcattatgt tacataaaaa aacgcttctt ttcgcagcat
     3601 tatccgccgc tctctgggga ggtgcaacac aggccgcaga tgccgccgtt gtcgcttcgc
     3661 ttaaacccgt tgggttcatc gcttctgcca ttgctgatgg tgtaacagaa acggaggttt
     3721 tactgcctga cggcgcttca gaacatgatt attcactgcg tccatcggat gtaaaacgct
     3781 tacagaacgc ggacttagtc gtttgggttg gcccggagat ggaagcgttt atgcaaaaac
     3841 cggtaagcaa attactagga gcgaagcagg taacgattgc gcagcttgaa gatgtgaaac
     3901 tgctactgat gaaaagtatt cacggcgatg atgatgatca cgaccacgcg gaaaaaagtg
     3961 aagaagatca ccatcacggc gatttcaaca tgcatctttg gctttcccca gagatagcgc
     4021 gggctacagc ggttgcaatc catggaaaat tagtggaact tatgccgcaa agtcgagcca
     4081 aacttgacgc caacctgaag gattttgagg cacaattagc ctcaaccgaa acgcaggttg
     4141 gtaacgagct cgcgccgctc aaggggaaag gttatttcgt ttttcacgat gcttacggct
     4201 atttcgaaaa acagttcgga ctgacaccgc ttggtcattt taccgttaac cctgagattc
     4261 aacctggcgc gcagcgttta catgaaataa gaacacagtt ggttgagcaa aaagcaacct
     4321 gcgtttttgc tgagccacag ttcaggccag cggtcgttga gagcgtcgca cgagggacat
     4381 ccgttcgtat gggaacgttg gatcccttgg ggacgaatat caaactgggt aaaacaagct
     4441 attcagaatt cctgagtcaa ttagccaacc agtatgcgag ctgcctgaaa ggagattaat
     4501 gaggaagtga ttacgtgcaa cagatagccc gctctgtcgc cctggcgttt aataatttac
     4561 cgcgaccaca ccgcgttatg ttggggtcgc tcaccgttct tactctggcc gtcgctgtct
     4621 ggcggcccta tgtttatcac cgcgatgcca cgccaattgt caaaaccatt gagctggaac
     4681 agaacgaaat tcgttcgctc ttacctgaag ccagtgagcc gattgatcaa gctgcacaag
     4741 aagatgaagc cattccccag gacgaactgg atgacaaaat cgccggtgaa gcgggtgtgc
     4801 atgaatatgt tgtttccact ggcgatacgc taagcagcat tctcaatcag tatggtattg
     4861 atatgggtga tatcacccaa ctggctgcgg ccgacaaaga attgcgtaac ctgaaaatcg
     4921 gtcaacaact ctcctggaca ttaaccgcgg acggcgaact gcagcgcctc acctgggaag
     4981 tgtctcgtcg tgaaacccga acctatgacc gtactgccgc taacggtttt aaaatgacca
     5041 gcgaaatgca gcaaggagag tgggttaaca atctgctgaa aggtaccgtc ggaggaagct
     5101 ttgttgccag cgccagaaac gccggtttaa ccagcgccga agtgagcgca gtgattaaag
     5161 ccatgcagtg gcaaatggat ttccgcaaac tgaaaaaagg cgatgaattt gcggtgttaa
     5221 tgtctcgaga gatgcttgat ggtaaacgtg agcaaagcca gctgctgggc gtacgtttgc
     5281 gttcagaagg taaagattat tacgcaatcc gcgctgagga tggcaaattc tacgaccgta
     5341 acggtactgg tctggcgaaa ggattcttgc gattcccgac ggcgaaacag ttccgtatct
     5401 cgtctaactt taacccgcgt cgtactaatc cggtgaccgg tcgcgttgca ccacacagag
     5461 gtgttgattt cgccatgccg cagggtacgc cagtgctttc agtgggtgac ggtgaagtgg
     5521 tggttgccaa acgcagtggc gcagcaggtt attatgtggc tattcgtcat ggtcgcagct
     5581 acaccacgcg ttatatgcac ttgcgcaaga ttctggtgaa accgggacag aaggtgaaac
     5641 gtggcgaccg tatcgcgctt tccggtaata ccggacgttc aaccgggccg catctgcact
     5701 atgaagtatg gataaaccag caggccgtaa acccgctgac ggcaaaactg ccgcgtaccg
     5761 aagggctgac cggctccgat cgtcgcgaat tcctggcgca ggccaaagag attgtgccgc
     5821 agctacggtt tgattaatta acatccattc gcagccggta cgcagtcagt accggctttt
     5881 tttatttggt gcggggcaag ttgcgccgct acactatcac cagattgatt tttgccttat
     5941 ccgaaactag aaaagcatgg aaatgaaaaa aaataatagc gaatacattc ctgagtttga
     6001 taaatccttt cgccacccgc gctactgggg agcatggctg ggcgtagcag cgatggtggg
     6061 tatcgcttta acgccgccaa agttccgtga tcccattctg gcacggctgg gacgttttgc
     6121 cggacgactg ggaaaaagct cacgccgtcg tgcgttaatc aatctgtcgc tctgctttcc
     6181 agaacgtagt gaagctgaac gcgaagcgat tgttgatgag atgtttgcca ccgcgccgca
     6241 agcgatggca atgatggctg agttggcaat acgcggaccg gagaaaattc agccgcgcgt
     6301 tgactggcaa gggctgcaga tcatcgaaga gatgaggcgt aataacgaga aagttatctt
     6361 tctggtgccg cacggttggg ccgtcgatat tcctgccatg ctgatggcct cgcaagggca
     6421 gaaaatggca gcgatgttcc ataatcaggg caacccggtt tttgattatg tctggaacac
     6481 ggtgcgtcgt cgctttggcg gtcgtctgca tgcgagaaat gacggtatta aaccattcat
     6541 cctgtcggta cgtcaggggt actggggata ttatttaccc gatcaggatc atggcccaga
     6601 gcacagcgaa tttgtggatt tctttgccac ctataaagcg acgttgcccg cgattggtcg
     6661 tttgatgaaa gtgtgccgtg cgcgcgttgt accgctgttt ccgatttatg atggcaagac
     6721 gcatcgtctg acgattcagg tgcgcccacc gatggatgat ctgttagagg cggatgatca
     6781 tacgattgcg cggcggatga atgaagaagt cgagattttt gttggtccgc gaccagaaca
     6841 atacacctgg atactaaaat tgctgaaaac tcgcaaaccg ggcgaaatcc aaccgtataa
     6901 gcgtaaagat ctttatccta tcaaataaaa aaaagcctct caaattattg agaggctgta
     6961 ctcgataaaa aatctcaatg agtgttccca ctattttgag tttttaggtt agtacgctat
     7021 tgagttaatc gtagcgtgat aatttcaaaa ggtttgaact caagattgca atattgattg
     7081 caataaaaac tgtcatctaa cttattttct tgaagatcga catattgaac gtagtgataa
     7141 ttacataccc acgaaagcat ggctgaaatt tctaatccat gactctcata taatcttacg
     7201 attataccgt cgccgtcttc agctaatttt attgtttcga tgataacgct gttagtatcg
     7261 atagcaaaaa atgatagtga agggggtaat tcacccgggt gcggtttgac agggacgacc
     7321 tgtaagggat gattcattat ataggcttga ttaataacac cacccacacg gtaatctcca
     7381 tgatgaggaa ataaggagaa tatgaatttt tgtttaccaa tatctgcaaa attattaatc
     7441 aggaaattat cataattgtc tgtcttaaca acttccccag gtttatgctg cgaacgcagc
     7501 aaagttaatt caagcgtctg gtctttgaca cggtagccat atttgttttt tgctattaaa
     7561 gctatgccag tttctcgatc agaaaggtcg acccagtgat gtgctggtat ttcatctttg
     7621 gcaaaagcga acgaatcatc gctatgcgtt ggtctgtcaa ttacaccgaa ctgaatttga
     7681 cattgtgcaa gagatgtttg tactgacacc gggaatttga ctttgagaga aacattaggt
     7741 tcgtgccaat caataaaagt ttggacatca acgcgtggac tgtcctgtgt cagggtaaat
     7801 gcgaagcgaa gataagagga attgtagtga taaatcagcg tcatcg
//
LOCUS       DADMHC010000180         7753 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.183, whole genome shotgun sequence.
ACCESSION   DADMHC010000180 DADMHC010000000
VERSION     DADMHC010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7753)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7753)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7753
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.183"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            594..4007
                     /locus_tag="JNZ57_003319"
     CDS             594..4007
                     /locus_tag="JNZ57_003319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000438152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HAY8829421.1"
                     /translation="MEQSLNFEMLRSQWPELAELACMAERYVHSDPESCLVKLRNYTE
                     LMVRWLYRQERLPEGIKANLYDLMNADVFTSMMPEAIIMKMDALRIHGNRAAHGGRIK
                     AKDTYWLLKEAYLLGIWLYVRYAHGNVDDCPKFTLPPLTQSSGRADEKRLEDAIKAQD
                     ESRERELALQRALQQEQEKAEHLTQRLNEARARNKHVADILSIDEAETRRRLIDSRLL
                     AADWNVGEELKNTDQVTQEHPVKEQPTTSGDGYADYVLWDEAHKPLAVVEAKKTSVNA
                     EQGRIQARLYADWLEKEYGQRPVIFYTNGYDIWLWDDHKTHGYPPRRVFGFYSKESLQ
                     YLIQQRETRLPLNRVPHVKDNEGKAVAGRLYQLETIARVSERFTNKYRQSLIVQATGT
                     GKTRVAIALSKLMIDARWVKRVLFLCDRKELRKQAANAFNQFTNEPLYVVGKSKKADR
                     QNARIYIATYPGMMKIMDHFDVGYFDLIIADESHRSIYNVYGDLFKYFDALQIGLTAT
                     PIDMVSKTTFGLFGCEGRIPTANYSLEDAIADNNLVPYEVVTHTTEFLREGIKREKLS
                     DAQIRELEEQGIDPNTLEFDGKALDEAIYNKDTNRYILRNLMENGLKDRDGQLPGKTI
                     IFARNHKHALLLNELFDDMYPQFAGRFCQVIDNYDPRAEQLIDDFKGLDESTNKELTI
                     AISVDMLDTGIDVPEIVNLVFAKPVKSKVKFWQMIGRGTRLCPGLYGYDDNGKPLDKQ
                     KFRIFDHWGNFEYHELHTEEAEVTATKSLAQKRFEAWVMLGAAAQRKFAKQAVDLVAH
                     QLREQINALDEKSIAVQEKWQQKAQYSDEKVLRQLSPKTQQDLLSVLAPLMQWLDVRG
                     QSDAIRFDMDILAAQTARYTNPEELDVLWPIIVEKVERLPPHLAQVQQQGQRINQLRD
                     LSWWKQASLEELEDIRIHLRGIMHLMEKDATPKFGSIQVDITEDANLIQTETRKTNIR
                     SIDFKLYRQQVQGALEPLFQQNPVLKKIRNGEPVTQNELDELAKLVLIQNPNVDIRAL
                     KEFYPQATASLDKLLRTIIGMDSDAVEVRFAQFAADNSLTSQQLRFLSLLKNHIRDYG
                     TIEMRQLFEQPFTHIHNEGVTGVFPDIAQIARLQKIVEELGVVTDAATV"
     gene            4071..5705
                     /locus_tag="JNZ57_003320"
     CDS             4071..5705
                     /locus_tag="JNZ57_003320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HAY8829422.1"
                     /translation="MITGDLKSKIDGLWEDFWVGGITNPLTVIEQITYLMYSRMLDTQ
                     EQRDEKRKQIAGIDFKPRFAPEQQEFRFSHYSNLGSDEMMEVVRDGVFQHFRQLGQAD
                     ASKVTLLGNFMKDARLEIVKPSLLTKAVEVIKNLPLDRGDTKGDLYEYLLSKLTTAGI
                     NGQFRTPRHIIRTMVEMMEPNPARGETICDPACGTGGFLATSYEYLLEKYSSLESIHT
                     EIGTNERGELEEQKIFTGDLLTPWRNHVDNNMFHGYDFDTTMLRIAAMNLIMHGVDAP
                     DIHYQDTMSQSFSTNFPQASKNAFNLILANPPFTGSLDEEDIDSTLSAMVKTKKTELL
                     FLARILQMLKVGGRSATIVPQGVLFGSSKAHQSLRKTLVEDNQLEAVINLPSGVFKPY
                     AGVATAILIFTKGGQTDEVWFYDLQNDGYSLDDKRNPIKDNDLPHLLASWKHYRTLRG
                     LPVDNFMGKKLASLLKQQYPEGINAGVDFKDRTQAAFVVPKADIAAQKYDLSINRYKE
                     VVYQAEEYEDPKVILKRLKDLEKEILADLDELEGML"
     gene            5714..6784
                     /locus_tag="JNZ57_003321"
     CDS             5714..6784
                     /locus_tag="JNZ57_003321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001438891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HAY8829423.1"
                     /translation="MVKLGDVINVHYGKALKADQRVSNGSVHVFGSSGIVGNHDKTLC
                     SYPTIIIGRKGSVGAITWAPSGGWIIDTAYYVEIKDNNKLDLRYLFYILSGIDLTKKT
                     ITTSIPGLNRDDLYDTFIKLPPFEEQKRIVDLLDKAEGIRQKREQSIKLADDFLRATF
                     ATMYGNPITNPKKWPVHLMGDIIEFKGGNQPPKSDFIFEPKQGYIRLVQIRDFKSDKY
                     ATYIPQEKAKRIFEVDDVMIARYGPPVFQILRGLSGSYNVALMKASPKENIRKGFIFY
                     LLQLPEYHDVVVKNSERTAGQTGVNLELLNKFNVPLPPIYYQDEILDRLARIEKFKEK
                     IEISLNHLEIQFLSLQKRLMGF"
     gene            complement(6904..7620)
                     /locus_tag="JNZ57_003322"
     CDS             complement(6904..7620)
                     /locus_tag="JNZ57_003322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000947861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829424.1"
                     /translation="MLSETKKRIPAHLFRMIKDELYELVLTDDPKGKLYVRDSEKIEE
                     GVSTTEFVVGYGAISMVKKSESMATKGLVGLERVDLIREVVFENGYYDWGCVVNDVLP
                     NICKGNVRIPIFHFLNHAKLINPDGSIINETELSGGVLSRLNITPISFQSQGWDKRRS
                     ETVPEVKVGVNELYLAYDFSFFFRMMPYMEPGLIKRDMGELLKILKKYIDEAMNTQVL
                     SSNFCKLVCIYDYIKNSHRY"
BASE COUNT         2260 a         1763 c         1805 g         1925 t
ORIGIN      
        1 gtccgttaaa ctcaggctac ctcagacagt cctgttctcc caaatatcat ggtattgata
       61 cgggagatta tgccgtacag gtacgacacg ttatgtcgtg ccaaagggga gtggatagaa
      121 aaaatggcga agatgcgaaa agttgattaa tgcattgaaa aaaaatgaat taataatgaa
      181 cttgggtaaa agcgccatca aaatacgaca cgacctgtcg tattttgtgt tagccgggaa
      241 aagatatcgg ctacttacta aaatgattta gtgctgaaaa tatttataag ccaataaata
      301 gacaggtatt acggagtaac gcccaggcta ttttaacgag cctgctgttt tattggctca
      361 aaaaacatat cccatagatg atcagccata cccgcgttag tgagcaaggt atcccttgag
      421 tagccagggc tgaagacgcc cattgatggg cgaaaaccaa ggttctggcc gttaaagcgg
      481 ctatgtcgtt aaacacatca ccaccatatg ccatccggct cacttcgtcg gccaaattag
      541 tgtgatattc tttccagaat ttctgttgta tccacaacat aaggcgatga ttgatggagc
      601 agtctctcaa ttttgaaatg ttgcgcagcc agtggccgga actggcagaa ctcgcatgta
      661 tggcagagcg ctatgttcac tccgatccgg aaagctgcct ggttaagctg cgcaactaca
      721 ccgaattgat ggtgcgctgg ttgtatcgtc aggagcggtt gccggaaggt attaaggcta
      781 atctttacga tttaatgaac gctgatgtct ttaccagcat gatgccggaa gccatcatca
      841 tgaaaatgga tgctctgcgt atccatggca accgtgccgc gcacggcgga cgtatcaaag
      901 ctaaagatac ttactggctg ctcaaagaag cgtatttgtt gggaatttgg ctgtatgttc
      961 gctacgccca cggtaatgtt gatgactgcc ccaaatttac actccctcca ttaacacaat
     1021 cttcaggtcg tgcagatgaa aaacgtctgg aagatgcaat caaggctcag gatgaaagcc
     1081 gtgagcgcga actggcgcta caacgcgcac tacagcaaga acaggaaaag gccgaacacc
     1141 tcactcaacg cctgaatgaa gccagagcgc gtaacaagca tgttgccgat attctctcta
     1201 ttgatgaagc ggaaacccgc cgtcgcctga ttgactctcg cttacttgca gccgactgga
     1261 atgtagggga agaacttaaa aacacggatc aagtcacaca agaacatcca gtcaaagagc
     1321 aacccaccac ctctggtgac ggttatgcag actatgtctt gtgggatgag gcacacaaac
     1381 cgttggcggt ggtggaagca aaaaaaacca gcgtcaatgc cgagcaagga cgaattcagg
     1441 cccggctgta tgcagactgg ctggaaaaag aatacggtca gcgtccggtc atcttctaca
     1501 ccaacggcta tgatatctgg ctgtgggatg accataaaac tcatggttat cccccgcgtc
     1561 gggtgtttgg cttctacagc aaggaaagcc tgcaatatct tattcagcag cgtgaaaccc
     1621 gtctgccgct gaacagagtg ccacacgtaa aagataacga aggtaaggcc gttgccggac
     1681 gtttgtacca gctcgaaacc attgcccgcg tcagtgaacg gtttaccaac aagtaccgac
     1741 aatcgttaat tgttcaggct acgggtacag gcaaaacccg cgtggcaatt gcactaagca
     1801 aactgatgat tgatgcccgc tgggtaaaac gcgtcctgtt tctttgcgac cgtaaagaac
     1861 tgcgtaaaca ggcggcaaat gcctttaatc aattcaccaa tgagccgctg tatgtggtcg
     1921 ggaaatcgaa aaaagcagac aggcagaatg ccagaatcta catcgctacc tatcccggta
     1981 tgatgaaaat catggaccat ttcgatgtcg gttatttcga tttgatcatc gccgatgaat
     2041 cccaccgctc tatctacaac gtctacggcg atctgtttaa gtattttgat gccctccaga
     2101 ttggcctgac ggccacgcca attgacatgg tgagtaaaac cactttcggc ctgtttggtt
     2161 gtgaaggacg tattcctacc gccaactaca gcctggaaga tgccatcgcc gataacaatc
     2221 tggttcccta tgaggttgtc acacacacaa cagaattcct gcgcgaaggt atcaaacggg
     2281 agaaattaag cgacgcacaa atccgcgagc tggaagaaca aggcatagat cccaatacgc
     2341 tggagtttga tggcaaggcg ctggatgagg cgatctacaa caaagacacc aaccgctata
     2401 tcctgcgtaa cctgatggaa aatggcctga aagatcggga cggccagttg cctggtaaaa
     2461 ccatcatttt cgcccgtaac cacaaacacg cgctgctgtt gaatgaattg ttcgacgata
     2521 tgtacccaca gtttgccggg cgcttctgcc aggtcatcga caactacgat ccccgcgccg
     2581 agcaactgat tgatgatttt aaagggctgg atgaaagcac caacaaagag ctgaccatcg
     2641 ctatctccgt tgacatgctc gataccggta ttgatgtccc ggaaattgtg aatctggtct
     2701 ttgccaaacc ggtcaaatca aaagtgaagt tctggcagat gattggccgt ggtacgcgcc
     2761 tctgtccggg gttgtacggt tacgacgata acggcaaacc gctggataaa cagaaattcc
     2821 gcattttcga tcattggggc aattttgagt atcacgagct gcataccgaa gaggcggaag
     2881 tcacagcgac aaaatcgctt gcgcaaaaac gcttcgaagc gtgggttatg ctgggggccg
     2941 ctgcgcagcg taaattcgcc aaacaggcgg tggatttagt tgctcaccag cttcgcgagc
     3001 aaatcaacgc actggatgaa aagtcgattg ccgtacagga aaaatggcag cagaaagcgc
     3061 agtacagtga tgaaaaggtg ctgcgccagc tttctccgaa aacacagcag gatctgctat
     3121 ctgttctggc cccgttgatg cagtggctgg acgtgcgcgg gcaaagcgat gccatacgct
     3181 ttgatatgga tattctggcg gcgcaaactg cccgttatac caacccggaa gagctggatg
     3241 ttctctggcc gatcatcgtc gaaaaagtgg agcgcctgcc gccgcatttg gcgcaggtgc
     3301 agcaacaggg acaacgaatc aatcagcttc gtgatttaag ctggtggaag caggccagcc
     3361 tggaagagct ggaggatatt cgcattcatt tgcgcggtat catgcacctg atggaaaaag
     3421 acgcgacgcc taaatttggt tcgatacagg tggatattac cgaagatgcg aacctgatcc
     3481 agacggagac ccgcaaaact aatatccgct cgattgattt caaactctat cgccagcagg
     3541 ttcagggggc gctggagccg ctgttccagc aaaacccggt tctgaagaaa atccgcaacg
     3601 gcgagccagt cacgcaaaac gagctggatg agctggcgaa gctggtgctg atccagaacc
     3661 ccaacgttga tattcgtgcg ttgaaagagt tttatccgca ggcaaccgcc agcctggata
     3721 aacttttgcg taccatcatc gggatggaca gcgacgcggt ggaagtgcgt tttgcccagt
     3781 tcgccgctga taacagcctg accagccaac aactgcgctt cctgtcattg ctgaaaaacc
     3841 acattcgcga ttacggcacc attgaaatgc ggcagctctt tgaacagcct tttacgcata
     3901 tccacaacga aggcgttacc ggtgtgttcc ctgatatagc gcaaatcgcc cgcctgcaaa
     3961 agatagtcga agagctgggt gttgtgaccg acgcagcgac ggtataatac acgcatgaca
     4021 agccccggca gcggggcttt tgtatttaaa acaggatata aacgctaaca atgattactg
     4081 gcgacttaaa aagtaaaatc gacggactat gggaagattt ctgggtgggt ggtatcacca
     4141 acccgctgac cgtaatcgaa cagatcacct atctgatgta ttcccggatg ctggataccc
     4201 aggaacaacg cgacgaaaag cgtaaacaaa tcgcgggtat tgattttaaa ccgcgttttg
     4261 cgccagaaca gcaggagttc cgtttcagtc actatagcaa ccttggctcg gatgagatga
     4321 tggaagtggt gcgcgatggc gtattccagc atttccgtca gctcggccag gccgatgctt
     4381 cgaaggtgac gctgctgggc aactttatga aagatgctcg tctggagatt gttaagccgt
     4441 cattgctgac caaagcggtt gaggtaatca aaaacctgcc attggatcgc ggcgacacca
     4501 aaggcgacct ttacgaatac ctgttaagca agctgacaac tgccggaatc aacggacagt
     4561 tccgcacacc gcgccacatt atccgcacga tggttgaaat gatggagccg aacccggccc
     4621 gcggcgagac gatttgcgat cccgcctgtg gcaccggtgg ttttctggca accagctatg
     4681 aatatctgct ggagaagtac agctcgctgg aatccattca tactgagatt ggcaccaacg
     4741 aacgtggcga gctggaagag caaaaaatct ttaccggcga tctgctgaca ccgtggcgta
     4801 accatgtgga taacaacatg ttccacggtt acgactttga caccacaatg ctacgtatcg
     4861 ccgccatgaa cctgattatg cacggcgtgg atgcgcctga tatccactat caggacacaa
     4921 tgagccagag tttcagcaca aacttcccgc aggccagtaa aaacgccttc aacctgattc
     4981 tggcgaaccc gccgtttacc ggttcactgg acgaggaaga tatcgactcc acgctgtcgg
     5041 caatggtgaa aaccaaaaaa accgaactac tgttcctggc gcgtattctg caaatgctga
     5101 aagtgggcgg gcgcagtgcc actatcgtgc cgcagggcgt gctgtttggc tctagcaagg
     5161 cgcaccagtc acttcgcaaa acgctggtgg aagataacca actggaagcg gtgatcaatc
     5221 tgccttctgg tgtatttaaa ccttacgctg gcgtggcgac ggcgatcttg atctttacca
     5281 aaggcggtca aacggatgag gtctggttct acgatctaca aaatgacggc tacagcctgg
     5341 atgataagcg caacccgata aaagacaacg atctgccgca tctgctggca agctggaagc
     5401 attaccgtac tttacgcggg ctaccggttg ataactttat gggtaagaag ttagcctcgt
     5461 tgcttaaaca gcagtacccg gaagggatta atgctggcgt tgattttaaa gatcgcacgc
     5521 aggcggcgtt tgttgtaccg aaagcggata ttgctgcgca gaaatacgat ctatccatca
     5581 accgttataa agaagtcgtg tatcaggcgg aggaatatga agatccgaag gtgatattga
     5641 agcggttaaa ggatctggaa aaagagattc tggcggattt ggatgagctg gaggggatgc
     5701 tgtgagttcg gcaatggtga agttagggga tgttattaat gttcactacg gaaaagcatt
     5761 aaaagctgat cagcgtgtat cgaatggaag tgtccatgtt tttggtagtt caggaattgt
     5821 cggcaaccac gataaaacgc tttgcagcta tcccacgata attattggcc gcaaaggcag
     5881 cgttggtgct attacctggg ctccaagcgg aggctggatc attgatactg cttattacgt
     5941 tgagatcaaa gataataata agttagatct ccgatacttg ttttatattc tgagcggaat
     6001 tgatctcact aagaaaacga ttaccacaag tattcctgga ttaaatagag acgatctcta
     6061 tgatacattt attaaattac caccttttga agagcagaaa cgaattgtgg atcttctcga
     6121 taaagctgag ggtatacgcc aaaaacgtga gcaatccatc aaactggctg atgatttttt
     6181 gcgtgctacg tttgctacaa tgtatgggaa tcctattaca aaccccaaaa aatggcctgt
     6241 ccatcttatg ggagacatta ttgaatttaa aggtggaaat caaccaccta aaagtgattt
     6301 tatttttgaa cctaaacagg gttatattag attagtacaa attagagatt ttaaatccga
     6361 taaatatgcg acgtacattc cgcaagaaaa agcaaaacgt attttcgaag ttgatgatgt
     6421 tatgattgct cgttatgggc cacctgtgtt tcaaatactt agaggtttat ccggcagcta
     6481 caatgtagct ttaatgaaag cttcacccaa agaaaatatt aggaaggggt ttatattcta
     6541 tcttctacaa cttccggaat atcatgatgt tgttgtaaaa aactctgaaa gaacagcagg
     6601 acaaaccggt gtaaatcttg aactattaaa caaattcaat gttcccctcc cacctatata
     6661 ctatcaagat gagatattag atagattagc tagaattgaa aaatttaaag aaaaaataga
     6721 aatatcatta aatcatttag aaatacaatt tttatcacta cagaagagat taatgggttt
     6781 ttaaatcctt agtatcgaaa taaacattaa tttattatat taagatattt taggaaatta
     6841 aggcgtcact cttaggtaac gccttttttt actatctcgc cccctaagaa ggttatatct
     6901 tacttaatac ctgtgactat ttttgatata atcataaata cacactaatt tgcaaaaatt
     6961 acttgacaat acctgagtat tcatagcttc atctatatat tttttcaata ttttgagaag
     7021 ctctcccata tcgcgcttga ttaatccagg ctccatataa ggcatcattc taaaaaagaa
     7081 actgaaatca taagcaagat ataactcatt gacccccacc ttgacctcag gaacggtttc
     7141 agagcgtcgt ttatcccatc cttgagactg aaaactaata ggagtgatat ttaatcgtga
     7201 taaaacgcca cctgagagtt ctgtttcatt aattatactc ccatcaggat taattaattt
     7261 agcgtgattt aagaagtgaa aaataggaat gcgcacattg cctttgcata tatttggcaa
     7321 aacatcatta acaacacatc cccaatcata atatccattt tcaaatacaa cctctcggat
     7381 gagatctaca cgctccagtc caaccaatcc tttagttgcc atcgattccg atttttttac
     7441 catcgaaata gcaccatatc ccacaacaaa ctcagttgta ctgacccctt cttcaatttt
     7501 ctctgaatcc ctcacatata attttccttt cggatcatca gttaagacca actcataaag
     7561 ttcatctttt atcattcgga ataaatgtgc tggaatcctt tttttagttt cactcagcac
     7621 ctcaaatatt tctttatagg atggtgcctg aacatatttt accgggattt ttttatgaat
     7681 cacagaatca ctaatatcag cctcttcaag ttcaggtttc cattcaacaa acaataattt
     7741 attctgtaaa aaa
//
LOCUS       DADMHC010000181         7730 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.184, whole genome shotgun sequence.
ACCESSION   DADMHC010000181 DADMHC010000000
VERSION     DADMHC010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7730)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7730)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7730
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.184"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(62..604)
                     /locus_tag="JNZ57_003323"
     CDS             complement(62..604)
                     /locus_tag="JNZ57_003323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005059113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829425.1"
                     /translation="MVINFITRDGDDDMNISYMNSNKTTSLPVELDALNNKDISYAKD
                     FSYVKDFFLYIETQLKIAKDFCRPGEEVSSSIASKVFHAFIDLVNKIRGKKDFMYICT
                     LCCFAEEVKGDYSHYRTFLFDIGNQYKVKLTQSGKKEFSLTLEFNDTIIESQKVTGNK
                     AKHILEDIEIFYRNKPDTYY"
     gene            967..1680
                     /gene="aphA"
                     /locus_tag="JNZ57_003324"
     CDS             967..1680
                     /gene="aphA"
                     /locus_tag="JNZ57_003324"
                     /EC_number="3.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid phosphatase AphA"
                     /protein_id="HAY8829426.1"
                     /translation="MRKITQAISAVCLLFALNSSAVALASSPSPLNPGTNVARLAEQA
                     PIHWVSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKNFSPESEDYLKNPVFW
                     EKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPAT
                     NMNPVIFAGDKPGQNTKSQWLQDKNIRIFYGDSDNDITAARDVGARGIRILRASNSTY
                     KPLPQAGAFGEEVIVNSEY"
     gene            1791..2207
                     /locus_tag="JNZ57_003325"
     CDS             1791..2207
                     /locus_tag="JNZ57_003325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HAY8829427.1"
                     /translation="MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQH
                     TSASLTLNENCDPTVRHDMERFFLRTVPDNGNYEHDYEGADDMPSHIKSSMQGTSLVL
                     PLHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE"
     gene            2211..2567
                     /locus_tag="JNZ57_003326"
     CDS             2211..2567
                     /locus_tag="JNZ57_003326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HAY8829428.1"
                     /translation="MTISELLQYCMAKPGAEQSVHNDWKATQIKVEDVLFAMVKEVEN
                     RPAVSLKTSPELAELLRQQHSDVRPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQ
                     AVNLLPEEKRKLLVQL"
     gene            complement(2602..5424)
                     /gene="uvrA"
                     /locus_tag="JNZ57_003327"
     CDS             complement(2602..5424)
                     /gene="uvrA"
                     /locus_tag="JNZ57_003327"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HAY8829429.1"
                     /translation="MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDT
                     LYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTIT
                     EIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKG
                     EHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLA
                     ESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGA
                     CPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEA
                     PWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSA
                     VREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAG
                     QRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV
                     MYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV
                     HGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLK
                     DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF
                     DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRC
                     EACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEARE
                     FFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYIL
                     DEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGE
                     ILVSGTPETVAECEASHTARFLKPML"
     gene            5678..6193
                     /gene="ssb1"
                     /locus_tag="JNZ57_003328"
     CDS             5678..6193
                     /gene="ssb1"
                     /locus_tag="JNZ57_003328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein SSB1"
                     /protein_id="HAY8829430.1"
                     /translation="MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDK
                     ATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEV
                     VVNVGGTMQMLGGRQGGGAPAGGNIGGGQPQQPQGGNQFSGGAQSRPQQSAPAAPSNE
                     PPMDFDDDIPF"
     gene            complement(6292..6573)
                     /locus_tag="JNZ57_003329"
     CDS             complement(6292..6573)
                     /locus_tag="JNZ57_003329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313069.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829431.1"
                     /translation="MATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRSDYVGLAVISS
                     GLGVVSACWFAMGLLGITMADITAIWHNIESVMIEEMNQTPPQWPMILT"
     gene            7003..>7730
                     /gene="pdeC"
                     /locus_tag="JNZ57_003330"
     CDS             7003..>7730
                     /gene="pdeC"
                     /locus_tag="JNZ57_003330"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-di-GMP phosphodiesterase PdeC"
                     /protein_id="HAY8829432.1"
                     /translation="MSHRARHQLLALPGIIFLVLFPIILSLWIAFLWAKSEVNNQLRT
                     FAQLALDKSELVIRQADLVSDAAERYQGQVCTPAHQKRMLNIIRGYLYINELIYARDN
                     HFLCSSLIAPVNGYTIAPADYKREPNVSIYYYRDTPFFSGYKMTYMQRGNYVAVINPL
                     FWSEVMSDDPTLQWGVYDTVTKTFFSLSKEASAATFSPLIHLKDLTVQRNGYLYATVY
                     STKRPIAAIVATSYQRLITHFYNHL"
BASE COUNT         1968 a         1888 c         1862 g         2012 t
ORIGIN      
        1 cttcctttcc ctattttttc gtgtggagta ataatttctg cacatctaac cattattaaa
       61 tttaataata agtatcgggt ttgttacgat agaatatttc tatatcctca agaatatgct
      121 ttgccttatt gcctgtgact ttctgagatt caattatagt atcgttaaat tctaatgtta
      181 aagagaactc tttttttccg ctttgtgtaa gtttaacctt atattgatta ccaatatcaa
      241 ataaaaaggt cctgtaatga gaataatcac ctttaacctc ctcggcaaaa cagcaaagcg
      301 tgcaaatata cataaagtct ttcttacccc tgattttgtt aactaaatca ataaatgcgt
      361 gaaaaacttt acttgcaata gaacttgata cttcttctcc aggtctacaa aaatcttttg
      421 caatttttaa ctgtgtttct atgtataaaa agaaatcttt gacataagaa aaatctttgg
      481 cataagagat atctttatta tttagtgcat ctagctcaac aggtaaagat gtcgttttgt
      541 tgctattcat atatgatata ttcatatcat catctccatc gcgagtaata aaattaatca
      601 ccattgtagg atagggttct ggtcaatcag gaatcatctt tataaacttc gattgttttt
      661 gtaatgctgt atcattaagt tcattaaatc gtacagcaga taaatgttct atcaaatttc
      721 gctcatttgc agaggattca tcataataaa cgtaaaatta atgtatcctt acatcgagta
      781 ataaacattt tttatacaaa aaaagacagg aacgtattta ctgggttaaa tataatcatc
      841 ctgcttttca tcacaaaaac cgcagataat ccttcctttt ccctgcagct ggcgttatgg
      901 tcagatggtt tttgcaacaa atctcacaat aaaaagtttc aacatactga ctatttaggg
      961 aaaaatatgc gcaagatcac acaggcaatc agtgccgttt gcttattgtt cgctctaaac
     1021 agttccgctg ttgccctggc ctcatctcct tcaccgctta accctggtac taacgttgcc
     1081 aggcttgctg aacaggcacc aattcattgg gtttcggtcg cacaaattga aaatagcctc
     1141 gcagggcgtc cgccaatggc ggtggggttt gatatcgatg acacggtact tttttccagc
     1201 ccgggcttct ggcgcggcaa aaaaaacttc tcgccagaaa gcgaagatta tctgaaaaat
     1261 cctgtgttct gggaaaaaat gaacaatggc tgggatgaat tcagcattcc aaaagaggtc
     1321 gctcgccagc tgattgatat gcatgtacgc cgcggtgacg cgatcttctt tgtgactggt
     1381 cgtagtccga cgaaaacaga aacggtttca aaaacgctgg cggataattt tcatattcct
     1441 gccaccaaca tgaatccggt gatctttgcg ggcgataaac cagggcaaaa tacaaaatcg
     1501 caatggctgc aggataaaaa tatccgaatt ttttatggcg attctgataa tgatattacc
     1561 gccgcacgcg atgtcggcgc tcgtggtatc cgcattctgc gcgcctccaa ctctacctac
     1621 aaacccttgc cacaagcggg tgcgtttggt gaagaggtga tcgtcaattc agaatactga
     1681 cagagcggga gagcgtgatg ctctcccgaa tgctgttttt ttaatcacac ctttatcctt
     1741 tcgctgtctt gctgcaaact gattaagaga gttttatcaa ggagcagcac atgtggtatc
     1801 aaaagacgct cacgcttagc gccaaatctc gtgggtttca tctggtaacg gatgaaattc
     1861 tgaatcagct ggctgatatg ccgcgcgtta acatcggctt actgcatctg ttgctgcaac
     1921 atacctccgc ctctctgaca cttaatgaga actgcgatcc caccgtacgc cacgacatgg
     1981 agcgtttttt cctccgcacc gttcccgaca acggaaatta tgagcatgac tatgagggag
     2041 cagacgatat gccttctcat atcaaatcct caatgcaggg aacatcgctt gtattgccgt
     2101 tacataaagg gcgtattcag accggcacct ggcaaggcat ctggctgggg gaacatcgca
     2161 tccacggcgg atcgcgtcgc atcatcgcga cactacaagg ggagtaaaaa atgaccattt
     2221 cggagttgct acaatattgc atggcaaaac caggcgcaga acagagcgtg cataacgact
     2281 ggaaagcgac gcagatcaaa gtggaagatg tgctgtttgc gatggtgaaa gaagtagaaa
     2341 atcgcccagc tgtttcgctg aaaaccagcc cggagctggc ggagctgcta cgtcagcagc
     2401 acagcgatgt gcgtcctagc cgccatctga ataaagcgca ctggagcacc gtgtatctcg
     2461 acggttcgct gccggattcg caaatctatt atctggtgga tgcgtcttat cagcaggcag
     2521 tgaatttact accggaagaa aagcgtaaat tgctggtaca actctgaaag gaaaaggccg
     2581 ctcagaaagc ggccttaacg attacagcat cggcttgagg aagcgtgccg tatgcgaagc
     2641 ttcgcactcc gcgacggttt ctggcgtacc ggagacgagg atttcgccgc cgccactgcc
     2701 gccttctggt cccaggtcga caatccagtc agcggttttg atcacgtcga gattgtgctc
     2761 aatcaccaca atggtattgc cctgatcgcg cagtttatgc agcacgtcga ggagttgctg
     2821 aatatcggcg aagtgcagac cggtggtcgg ctcgtcgaga atatacagcg tctgcccggt
     2881 gccacgtttt gacagctcac gcgccagctt cacgcgctgg gcttcaccac cagaaagtgt
     2941 ggttgcggac tgccccaggc gaatgtacgt cagaccaacg tccatcaacg tttgcagctt
     3001 acgcgccaga gctggcaccg catcaaagaa ctcacgcgcc tcttcgatgg tcatatccag
     3061 cacttcgtgg atggttttgc ctttgtactt aatttccagt gtttcacggt tatagcgttt
     3121 acctttgcac tgatcgcacg gcacgtagat atccggcagg aagtgcatct ccactttgat
     3181 cacaccgtcg ccctgacagg cttcgcagcg cccgccacgg acgttaaagc tgaaacgtcc
     3241 tggcgtataa ccacgcgcac gggattccgg tacgcccgca aacagttcgc gcacaggtgt
     3301 aaacacgccg gtataggtcg ccgggttaga acgtggagta cgaccaattg ggctttggtc
     3361 gatatcgatc actttatcga aatgctccag cccctgaata tcgcgatacg gtgccggttc
     3421 ggcgatggtc gcaccattca actggcgttg ggcaatcggg aacagtgtgt cgttaatcag
     3481 cgtcgattta ccggaacctg aaacccctgt gatgcaggta aacagaccga ctggcagcgt
     3541 gagcgtcacg tccttcaggt tgttgccgcg tgcacctgtc agcttcagca ctttttctgg
     3601 attcgccgga acgcgtttct tcggcacttc aatcttgcgt ttaccgctca tgtactgccc
     3661 ggtcaacgat tcaggcaccg ccatgatcgc ttccagcgga ccttctgcga ccacttcacc
     3721 gccgtgaaca cccgcaccag gaccgatatc gatcacatgg tcagcggcgc gaattgcgtc
     3781 ttcgtcatgc tccaccacaa tcacggtatt accgagatcg cgcagatgga taagcgtacc
     3841 caacaggcgc tcgttatcgc gctggtgcag gccgatagac ggctcgtcca gtacatacat
     3901 aacgccaacc aggcccgcac caatctggct cgccagacgg atacgctggg cttcaccgcc
     3961 ggaaagtgtt tctgccgagc gggaaagtgt caggtaattc aggccgacgt taacgaggaa
     4021 tttcagacga tcgccgatct ctttaaggat tttttctgca atcttcgccc gctgaccagc
     4081 tagtttgaga ttgttgaaga attccatcgc atgaccgatg ctcatgtcgg agatagcagg
     4141 cagcggcgta ttctcgacat aaacgtggcg cgcttcccga cgcagacgcg tcccttcgca
     4201 gctggcgcat gggcgattgc tgataaactt ggctaattct tcacgtaccg cactggattc
     4261 tgtctcttta taacggcgct ccatattgtg cagcacgcct tcgaacggat gacgacggat
     4321 ggaggtatcg ccacgatcgt tcatgtattt gaattcaatg ttttctttgc cagaaccgta
     4381 caacaccact ttatgcacgt tcgcgctcag gctgccccac ggcgcttcga cgtcgaactt
     4441 atagtgatct gccagcgatt tcagcatctg gaagtaatag aagttgcggc gatcccagcc
     4501 acggatcgca ccgccagcca gtgacagctc ggggttttgg atcacgcggt caggatcgaa
     4561 atattgctgt acgccaaggc cgtcacaggt tgggcaggca cctgccgggt tgttaaacga
     4621 aaacagtcgt ggctccagtt cacgcatact gtagccgcaa attgggcagg cgaagttggc
     4681 ggagaacagc agctcttccg ctttcgggtc atccatatcc gccactaccg ctgtaccacc
     4741 ggaaagctcc agcgcggttt caaacgactc cgcaagacgt tgggtaagat cgtcacgcac
     4801 cttgaagcga tcaaccacca cttcaatagt gtgtttcttt tgcagttcca gtttcggcgg
     4861 atcggaaaga tcgcagactt cgccatcaat acgagcacgg atgtaaccct ggcttgctag
     4921 gttctccagc gttttggtgt gttcgccttt gcgctcttta atgattggcg cgagtagcat
     4981 cagacgcttg ccttccggct gcgacagcac gttatccacc atctggctga cggtttgcgc
     5041 cgccagcggg acgtcgtggt ccggacagcg cggttcgccg acgcgggcga acaacaaacg
     5101 caaatagtcg tggatttcgg tgattgtccc caccgtagaa cgcgggttat gagacgtcga
     5161 tttctgctca attgagatgg caggagaaag cccctcaata tgatcgacgt ccggcttttc
     5221 catcagtgac agaaactgcc gcgcataggc ggaaagggat tcaacgtaac ggcgctgccc
     5281 ttcggcatat aaggtgtcga aagcgagcga ggatttgcca gaacccgaaa gcccggtcac
     5341 gacaatgagc ttgtcgcggg ggataacgag gttgatgttt ttgagattat gggtgcgggc
     5401 gccccgaact tcgatcttat ccattcacct ttcccggatt aaacgctttt ttgcccggtg
     5461 gcatggtgct accggcgatc acaaacggtt aattatgaca caaattgacc tgaatgaata
     5521 tacagtattg gaatgcatta tccggagtgt tgtgtaacaa tgtctggcca ggtttgtttc
     5581 ccggaaccga ggtcacaaca tagtaaaagc gctattggta atggtacaat cgcgcgttta
     5641 cacttattca gaacgatttt tttcaggaga cacgaacatg gccagcagag gcgtaaacaa
     5701 ggttattctc gttggtaatc tgggtcagga cccggaagta cgctacatgc caaatggtgg
     5761 cgcagttgcc aacattacgc tggctacttc cgaatcctgg cgtgataaag cgaccggcga
     5821 gatgaaagaa cagactgaat ggcaccgcgt tgtgctgttc ggcaaactgg cagaagtggc
     5881 cagcgaatat ctgcgtaaag gttctcaggt ttatatcgaa ggtcagctgc gtacccgtaa
     5941 atggaccgat caatccggtc aggatcgcta caccacagaa gtcgtggtga acgttggcgg
     6001 caccatgcag atgctgggtg gtcgtcaggg tggtggcgct ccggcaggtg gtaatatcgg
     6061 tggtggtcag cctcagcagc cgcagggtgg caatcagttc agcggcggcg cgcagtctcg
     6121 cccgcagcag tccgctccgg cagcgccgtc taacgagccg ccgatggact ttgatgatga
     6181 cattccgttc tgatttgtca ttaaaacaat aggttatatt gttttaaggt ggatgattaa
     6241 agcatctgcc agccataaaa aagaagcctc cgttatggag gcttctacgt atcaggtcaa
     6301 aatcattggc cattgtggcg gtgtctgatt catctcttct atcatcaccg actcgatgtt
     6361 gtgccagata gcggtgatgt ccgccattgt gatgccaagc aaccccattg cgaaccaaca
     6421 ggcggaaaca acgcccagac cgctgctgat caccgcaagc ccgacataat cagaccgacg
     6481 aaaacggatg ttgagtgtgc tggccagaaa catcattacg gcactaagaa gttgccagcg
     6541 aagaagaacc acgccagtgg tgagggtagc catcaaacaa ttcctctgaa aagagccgat
     6601 gccctggaca gcgcggcgtt gttcacggga ggcgtggtac actctggcta tcgcggggct
     6661 tgcagaacac aaaaatgaaa cactctgttt gtttcattaa ttttgtgaaa tatatcacaa
     6721 ttgattgttt gttagccata ttaggccgtg acttttattg ctgtacagat tatgtggttt
     6781 ttcagtggca ttaagggcat atcttcccgc cgcctctgca ttcctgtagg aaattaattt
     6841 tgaatatcaa tgaattattt tcatccaggt gacgattaga aaggtatcaa tttcaaatca
     6901 ggcaaaagtg ctatttatac cgtaagattt atctaaagac gtcggtaccc agggttttca
     6961 ccttacaatg gccgggtata aacaggcagg aaattgatag caatgagtca tcgtgcacga
     7021 caccaattac tggcgttgcc gggcattatc tttttagttc tctttcccat cattctttcg
     7081 ctatggattg ccttcctttg ggcaaaatca gaagtgaata atcagctccg aacctttgct
     7141 caactggcac tggataaatc cgagctggtc attcgccagg cagatttagt gagcgatgca
     7201 gctgaacgct atcaggggca agtttgcact ccagcccatc aaaagcgaat gttgaatatt
     7261 attcgtggct atctttatat taatgaattg atctatgccc gtgataacca ttttttatgc
     7321 tcatcgctga tagcgcctgt aaacggctat acgattgcac cggccgatta taagcgtgaa
     7381 cctaacgttt ctatctatta ttaccgcgat acgccttttt tctctggcta taaaatgacc
     7441 tatatgcagc ggggaaatta tgtggcggtt atcaaccctc tcttctggag tgaagtgatg
     7501 tctgatgatc cgacattgca atggggtgtg tatgatacgg tgacgaaaac ctttttctcg
     7561 ttaagcaaag aggcctcggc agcaacgttt tctccgctga ttcatttgaa ggatttaacc
     7621 gtacaaagaa atggctattt atatgcgaca gtttattcga caaaacgccc aattgcagcc
     7681 attgttgcga cttcatatca acgtcttata acccattttt ataatcatct
//
LOCUS       DADMHC010000182         7711 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.185, whole genome shotgun sequence.
ACCESSION   DADMHC010000182 DADMHC010000000
VERSION     DADMHC010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7711)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7711)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7711
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.185"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            162..305
                     /locus_tag="JNZ57_003331"
     CDS             162..305
                     /locus_tag="JNZ57_003331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YobF family protein"
                     /protein_id="HAY8829433.1"
                     /translation="MCGIFSKEVLSKHVDVEYRFSAEPYIGASCSNVSVLSMLCLRAK
                     KTI"
     gene            318..527
                     /gene="cspE"
                     /locus_tag="JNZ57_003332"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
     CDS             318..527
                     /gene="cspE"
                     /locus_tag="JNZ57_003332"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator/RNA stability
                     regulator CspE"
                     /protein_id="HAY8829434.1"
                     /translation="MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTL
                     AEGQNVEFEIQDGQKGPAAVNVTAI"
     gene            693..1502
                     /gene="rlmA"
                     /locus_tag="JNZ57_003333"
     CDS             693..1502
                     /gene="rlmA"
                     /locus_tag="JNZ57_003333"
                     /EC_number="2.1.1.187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (guanine(745)-N(1))-methyltransferase"
                     /protein_id="HAY8829435.1"
                     /translation="MSFSCPLCHQPLSREKNSYICPQRHQFDMAKEGYVNLLPVQHKR
                     SRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHA
                     FADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCK
                     AEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCY
                     PMRLRGDEAVALLQMTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY"
     gene            complement(1499..2065)
                     /gene="mntP"
                     /locus_tag="JNZ57_003334"
     CDS             complement(1499..2065)
                     /gene="mntP"
                     /locus_tag="JNZ57_003334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP"
                     /protein_id="HAY8829436.1"
                     /translation="MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFG
                     AVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRR
                     HGFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGS
                     IIGKKAEILGGLVLIGIGVQILWTHFHG"
     gene            complement(2493..2951)
                     /locus_tag="JNZ57_003335"
     CDS             complement(2493..2951)
                     /locus_tag="JNZ57_003335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF986 domain-containing protein"
                     /protein_id="HAY8829437.1"
                     /translation="MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGR
                     IDSVIFVGLIVILIYNNVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFA
                     NVWIEYSLIKAMNLSEDGVLVMQLEQRRLLIRVRNIDNLEKIYKLIVSTQ"
     gene            complement(3006..3857)
                     /locus_tag="JNZ57_003336"
     CDS             complement(3006..3857)
                     /locus_tag="JNZ57_003336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020804907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IID"
                     /protein_id="HAY8829438.1"
                     /translation="MVDTTQTTTEKKLTQSDIRGVFLRSNLFQGSWNFERMQALGFCF
                     SMVPAIRRLYPENNEARKQAIRRHLEFFNTQPFVAAPILGVTLALEEQRANGAEIDDG
                     AINGIKVGLMGPLAGVGDPIFWGTVRPVFAALGAGIAMSGSLLGPLLFFILFNLVRLA
                     TRYYGVAYGYSKGIDIVKDMGGGFLQKLTEGASILGLFVMGALVNKWTHVNIPLVVSR
                     ITDQTGKEHVTTVQTILDQLMPGLVPLLLTFACMWLLRKKVNPLWIIVGFFVIGIAGY
                     ACGLLGL"
     gene            complement(3870..4670)
                     /locus_tag="JNZ57_003337"
     CDS             complement(3870..4670)
                     /locus_tag="JNZ57_003337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HAY8829439.1"
                     /translation="MEITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLG
                     DMKTGIIIGGTLEMIALGWMNIGAAVAPDAALASIISTILVIAGHQSIGAGIALAIPL
                     AAAGQVLTIIVRTITVAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVAL
                     SVGTSEVQNMLNAIPEVVTNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAA
                     FTNFNLVALGVIGTVMAVLYIQLSPKYNRVAGAPAQAAGNNDLDNELD"
     gene            complement(4733..5704)
                     /gene="manX"
                     /locus_tag="JNZ57_003338"
     CDS             complement(4733..5704)
                     /gene="manX"
                     /locus_tag="JNZ57_003338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HAY8829440.1"
                     /translation="MTIAIVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAET
                     LIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIPMLVETL
                     MARDDDPSFDELVALAVETGREGVKALKAKPVEKAAPAPAAAAPKAAPTPAKPMGPND
                     YMVIGLARIDDRLIHGQVATRWTKETNVSRIIVVSDEVAADTVRKTLLTQVAPPGVTA
                     HVVDVAKMIRVYNNPKYAGERVMLLFTNPTDVERLVEGGVKITSVNVGGMAFRQGKTQ
                     VNNAVSVDEKDIEAFKKLNARGIELEVRKVSTDPKLKMMDLISKIDK"
     gene            6167..>7711
                     /gene="yoaE"
                     /locus_tag="JNZ57_003339"
     CDS             6167..>7711
                     /gene="yoaE"
                     /locus_tag="JNZ57_003339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family cation transport protein YoaE"
                     /protein_id="HAY8829441.1"
                     /translation="MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRD
                     KARLLGLSLALIMRLGLLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKAT
                     TELHERLENRDHDSGHGKGYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAA
                     VVIAMAVMLLASKPLTRFVNQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAI
                     GFSIIIEVFNQIARRNFIRHQSTLPLRARTADAILRLMGGKRQANVQHDADNPMPIPE
                     GAFAEEERYMINGVLTLASRSLRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPV
                     CRGELDEIIGIVRAKELLVALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGS
                     FVIVTNEFGVVQGLVTPLDVLEAIAGEFPDADETPEIITDGDGWLVKGGTDLHALQQA
                     LDVEHLADDDDIATVAGLVISANGHIPRVGDVIDVGPLHITIIEANDYRVDLVRIVKE
                     QPAHDED"
BASE COUNT         1954 a         1889 c         1921 g         1947 t
ORIGIN      
        1 caatgatata tcggcgcgta ttccgttgca taagtgtgca aaaaaagtgg aagacgtatc
       61 gagatttgtg cgtctgatcg agacatgttt aaaaatggct tgccataatt aacgttgtat
      121 gtgataacag atttcgggtt aaacgaggta cagttctgtt tatgtgtggc attttcagta
      181 aagaagtcct gagtaaacac gttgatgttg aataccgctt ctctgccgag ccttatattg
      241 gtgcctcatg cagtaatgtg tcagttttat ctatgttatg cctgcgggcg aagaaaacaa
      301 tctaaggaat ttttcaaatg gcaaagatta aaggtcaggt aaagtggttc aacgagtcta
      361 aaggttttgg cttcattact ccggctgatg gcagcaaaga cgtgttcgta cacttctccg
      421 ctatccaggg taatggcttc aaaactctgg ctgaaggtca gaacgttgag ttcgaaattc
      481 aggacggcca gaaaggtccg gcagctgtta acgtaacagc tatctgatcg aatccactga
      541 tctgaagtgt gaatacgctt caatctcgct ataaagcctc gtcgaatgcg aggcttttta
      601 ctatgcttta tcttcgctcc tggcgttcgg atatttgccc gccgcgtgat tcgcgttaca
      661 cttgcggcct ttagtatcct gccggagttg tcatgtcttt ttcctgtcca ctttgccatc
      721 agcctctttc gcgtgaaaaa aacagctata tctgtcccca gcgacatcag tttgatatgg
      781 cgaaagaagg gtatgtcaat ctgctgcccg ttcagcataa acggtctcgt gatccgggcg
      841 acagcgcgga aatgatgcaa gcacgccgcg cattcttaga tgccggacat tatcagccgc
      901 tgcgtgatgc aattgtcgcc caactgaggg aacggcttga tgataaggcc acggcggtgc
      961 tggatattgg ctgtggtgaa gggtattaca cacacgcatt tgccgatgcg ttgcccgaaa
     1021 tcaccacgtt tggtctggat gtttcgaagg tagcgataaa agcggcggcg aaacgctatc
     1081 cgcaggtcac tttttgtgtc gcttccagcc accgtttgcc gttttccgat accagtatgg
     1141 acgccataat acgtatttac gcgccgtgta aagcagaaga attagcacga gtagtgaagc
     1201 ccggcggctg ggtcattact gccacgccgg gaccgcgaca tttgatggag ctgaaggggc
     1261 tgatttacaa tgaagtacat cttcatgcac ctcatgcaga acaactggaa ggttttacat
     1321 tacagcagag tgcggagttg tgttatccga tgcgtcttcg cggtgatgaa gccgtcgcat
     1381 tattgcagat gacgccgttt gcctggcgtg cgaagccaga agtctggcaa acactggcag
     1441 caaaagaagt gttcgactgc cagacggact ttaatattca cctctggcag cgttcttatt
     1501 aaccgtggaa gtgcgtccag aggatctgga cgccgatgcc gatcagtacc agcccgccga
     1561 gaatttccgc ttttttccca ataattgagc cgataaagcg accaaccatc atccctaatg
     1621 ttgacataat caaggttgca caaccaatgg ccaatgcggt cgcgataatg ttgacctgca
     1681 ggaaagcaag accaacaccc acagccatgg catccaggct ggtggcaatc gcggtggtta
     1741 ccagtagcca gaaaccgtgt cgacggcgcg gctcttcatc ttcatcatct gcgccacgaa
     1801 aaccctcaat aatcattcgc ccgccgagga atatcagcag cacaaacgca atccagtggt
     1861 tccattcaag gacaaaccgg ctggctaaca tgcccattcc ccagccgatc agcggcgtca
     1921 gggtttcgac ggcaccaaaa ataaggccgg ttcgcaatgc ttcagaaaat ttcggtttat
     1981 ggagggtggc acctttaccg attgatgcag caaatgcatc catcgacata ccaaacgcaa
     2041 gaagaacagt agcagtgata ttcatgacaa tgtcctgacc ggggtatcca taaaacacat
     2101 catcgccccc agcaaacatg catacatgaa caacaagccg tgatggtttt cgcgttcatg
     2161 caggcatagc gattgatgtg catatggtct cgcctgactg aaagtattca gtccgtacgt
     2221 gccacgtttt gcaacgagta tgttgacacg tacatttccg gaatctggaa atcggctact
     2281 ccccaaatga gggcgcaacc ttaacatatt ttgagaatat aaaacaactg ttggaatata
     2341 ttatttcatt gctttattga taacgaattc atttagattt atatatcaat gaaacgttaa
     2401 aataaataac aaataaggga agaggtaata tagcctaagc tatgtctgat tattaaaaat
     2461 acactaaaca tagctttggc taaattcata acttattgag ttgaaacgat aagcttataa
     2521 attttttcca gattgtcgat atttcgaacg cggattaaca gccgacgctg ttctaattgc
     2581 atcaccaaca cgccatcttc cgacaagttc atcgctttga ttaggctata ttcaatccag
     2641 acattggcga agaaaaaacc tttttgttta aagatgatct tcggaacgcg gatccagaat
     2701 atataaaaac ccatcagagc cagtgcgctt aataaccatg tcgttattaa cgcaccatga
     2761 ttcgtgacgt tgttatagat aagaatgaca atcaatccga cgaagataac gctatcgatg
     2821 cgaccacgcc ggagcaaagg aattgccagc agggtggggc cgttacggcg gggcatgatg
     2881 aactgatcgt agatcgcgaa ggccaggagt gcggcgatga aaagaatcag taccaggtcc
     2941 gtgattgtca ttaatcctcc agataaaaaa acggggccaa aaggccccgg tagtgtacaa
     3001 cagtcttaca gtcccagcag gccgcaagcg taaccagcga taccgatgac gaagaagcca
     3061 acgatgatcc acagcgggtt aacttttttg cgcagtagcc acatacaagc aaaggtcagc
     3121 agcagtggta ccaggcctgg cattaactgg tccagaatag tctggacagt agtaacgtgt
     3181 tctttgcccg tctggtcagt aatgcgagag acaaccagcg ggatgttgac atgtgtccac
     3241 ttgttaacca atgcccccat gacaaacagg ccgaggatag acgccccttc cgtcagtttt
     3301 tgcaggaagc caccacccat atctttaacg atatcgatac ctttggagta accatacgct
     3361 acgccgtagt aacgggttgc cagacgcacc aggttaaaca ggatgaagaa cagcagcgga
     3421 cctaacaggc tgccgctcat cgcgataccg gcacccagtg ctgcaaatac cggacgtacg
     3481 gttccccaga agatcgggtc gcctacacca gccagcggcc ccatcaaacc gactttgata
     3541 ccgttgatag caccgtcgtc gatctctgcg ccattagcac gctgttcttc cagcgccagg
     3601 gttacgccga gaatcggcgc agccacgaac ggctgggtgt taaagaactc caggtgacgg
     3661 cgaatagctt gtttacgagc ttcgttgttc tcagggtaga ggcgacgaat tgccggtacc
     3721 atagagaagc agaaacccag tgcctgcata cgttcgaagt tccatgaacc ctggaagagg
     3781 ttagaacgca ggaagacgcc acgaatatca ctttgagtga gttttttctc ggtggtagtt
     3841 tgagttgtat caaccatttc gctcacctgt tagtccagtt cattatcgag atcgttgtta
     3901 ccagcagcct gagcaggcgc accggctacg cggttgtatt tcgggctaag ttggatgtag
     3961 agcactgcca taacagtacc gatcacaccc agagcaacca ggttaaagtt ggtgaatgct
     4021 gcggttacga agccgaggta gaagaacggc atcaggtagc cagcacgcat catgttgata
     4081 accatcgcat aaccaaccac cacgatcatg ccaccggcga tattcagacc attggtcacc
     4141 acttccggaa tcgcattcag catgttctgt acttcgctgg taccaacaga cagcgcaacg
     4201 atgacggccg gaatagccac acgcattgct tgcaggaaca gagaagaaac gtggatccag
     4261 gaaatcgctg tcaggttgcc gttatcagca gccttatccg cagcgtgctg gaaagcaacg
     4321 gtaatagtac gaacgatgat ggtcagtacc tggcccgcag cggccagagg gattgccagt
     4381 gcgatacctg caccaatgct ctgatgacct gcgataacca gaatggtaga aatgatagaa
     4441 gccagagcgg cgtcaggcgc aactgcagca ccgatgttca tccagcccag cgcgatcatt
     4501 tccagcgtac caccgataat aataccggtt ttcatatccc caagaacgat acccaccagg
     4561 gtacacgcga ttagcggacg gtgaaactga aattcatcga ggattgatcc catacctgcg
     4621 atacaggcta cgataaatac cagcacaatt tgaagagtgg taatctccat tgtacttctc
     4681 ctgtttacgt aagacttaag tgtgaaaact gagtgataat caacacaata cgttacttat
     4741 cgattttgct gatcagatcc atcattttca gtttcggatc ggtggaaacc ttacggactt
     4801 ccagctcaat accgcgcgca ttcagtttct tgaacgcctc gatatctttt tcatcaaccg
     4861 aaaccgcgtt attcacctgg gttttacctt gacggaatgc cataccaccg acgttaacag
     4921 aggtgatttt cacgccgcct tcaacgagac gctctacatc tgttgggttg gtaaataaca
     4981 gcattacgcg ttcgccagca tatttcgggt tgttgtagac gcgaatcatt ttggcaacat
     5041 caactacgtg tgctgttacg cccggaggtg caacctgggt gagcagtgtc ttacgaacgg
     5101 tatccgcagc cacttcatca ctaacaacaa taatacggga gacattggtt tctttggtcc
     5161 agcgggtggc gacctgaccg tgaatcagac ggtcgtcgat acgcgcaagg ccaataacca
     5221 tgtagtcgtt tggccccatt ggttttgccg gagttggagc cgcttttggt gctgcggcag
     5281 cgggtgctgg cgcggctttt tcaaccggtt tggctttcag tgctttcacg ccttcacggc
     5341 ctgtttctac tgccagcgca accagttcat caaagcttgg gtcatcatca cgagccatta
     5401 acgtttccac gagcattgga atgttaacgc ctgcaatgac ttcataatgc tctttgtcga
     5461 cgacaatgcg gctggcagca ttgaacgggc tgcctcccca tgtatcaacg agaaacagca
     5521 cgcctttagt ggtgtcgagt tttgccaact gagcgttgta cttttcaatc agcgtttcgg
     5581 cattttcacc tggaacgaaa tcgatccagc cgacgttttc ctgctcgcct aacagcattt
     5641 ctgccgtttt aagcaactgc tctgcagccc aaccatgtgt gcctataaca atagcaatgg
     5701 tcacttgcta cctcctttat tatcgttaac acctcaacgt gccagatgta tttttgaatc
     5761 gtcgtccaca atcgaatcga ttcagataag ggctacaacc aaaaacccct gcgtttcgcg
     5821 atttatttta gatatcgaaa aaattatttt atgtgatgaa gatccgtaat ttaactttcg
     5881 attagcagaa atttcgaaag gtaaaatatc cttgtcacat tcgtttgcaa aggaaggtaa
     5941 atctttgcca aatcagaggc gtctctgata tgtttaactc ccgtttaaca accatggagt
     6001 atagggcagt agcccgcagt atggatcgtc accgacgtca tttcagcatc aggcctttta
     6061 acgcctgcct ttctggcact ctatgccgca cctttcgttt gcattttgtc gttacgcctg
     6121 cattatttct ggcgtcgaat agctattcct taagcaggag cttgtcatgg aattcttaat
     6181 ggacccctca atttgggcgg ggctactcac gcttgttgtt ctcgaaattg tgctgggtat
     6241 cgataacctg gtcttcatcg ccattcttgc tgacaaactg ccgccaaaac aacgcgataa
     6301 agcgcgtttg ctggggttat cactggcgct gattatgcgt ctggggctgc tgtcgctgat
     6361 ttcatggatg gtcacgctga ccaaaccgct atttaccgtc atggatttct ccttctccgg
     6421 acgcgacctg attatgttgt tcggggggat attcttgctg ttcaaagcaa caaccgaact
     6481 gcatgaacgg ctggaaaacc gcgatcatga ttccggccac ggtaaaggct acgccagttt
     6541 ctgggtggtc gtcacacaga ttgtcatcct tgacgccgtc ttctcgttgg atgcggtaat
     6601 tactgcagta gggatggtta accatctgcc ggtgatgatg gcggcggtag tgattgcgat
     6661 ggcggttatg ttgctggcat ccaaaccgct gacgcgattc gttaaccagc accccacggt
     6721 ggtggtgctc tgtctgagct tcctgttaat gattggtctg agtctggtgg cagaaggttt
     6781 cggtttccac attccgaaag gttacctgta tgccgcgatt ggcttctcga tcatcatcga
     6841 agtgtttaac cagattgcgc gtcgcaactt tattcgccac cagtcgactt tgccgctgcg
     6901 agcgcgtact gccgatgcca tcctgcgttt gatgggcggg aaacgtcagg ccaatgttca
     6961 gcacgatgcc gataacccga tgccgatccc ggaaggtgca tttgccgaag aagaacgtta
     7021 catgattaac ggcgtactga cgctggcgtc gcgttctctg cgcgggatca tgacgccgcg
     7081 cggtgaaata agctgggttg acgctaatct cggggtcgat gaaatccgcg agcaactgct
     7141 ctcttcaccg cacagtctgt tcccggtatg tcgcggtgaa ctggatgaaa tcatcggtat
     7201 tgtacgtgct aaagaactgc tggtggcgct ggaagagggc gttgatgtgg cggcgattgc
     7261 ttcggcgtct ccggcgatta tcgtcccgga aaccctcgat ccgatcaacc tgttgggcgt
     7321 gctgcgtcgt gctcgcggga gctttgttat cgtgaccaac gagtttggtg tggtacaagg
     7381 tctggtcacg ccgctggatg tgctggaagc cattgcgggt gaattcccgg acgctgacga
     7441 aacgccggaa atcattactg atggtgacgg ctggctggta aaaggcggta cagatttgca
     7501 tgccttgcag caggcgcttg atgttgagca ccttgccgat gacgatgata tcgcgacggt
     7561 cgcgggcctc gtgatctcgg caaatggtca cattccccgt gtgggcgatg tgattgatgt
     7621 agggccactg catatcacca tcattgaagc caatgattat cgtgttgatc tggttcgcat
     7681 tgttaaagag caaccggcgc acgatgaaga t
//
LOCUS       DADMHC010000183         7677 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.186, whole genome shotgun sequence.
ACCESSION   DADMHC010000183 DADMHC010000000
VERSION     DADMHC010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7677
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.186"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            6..173
                     /locus_tag="JNZ57_003340"
     CDS             6..173
                     /locus_tag="JNZ57_003340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfL family protein"
                     /protein_id="HAY8829442.1"
                     /translation="MNKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISIS
                     KIIGGCGPTAQ"
     gene            418..1806
                     /gene="frlA"
                     /locus_tag="JNZ57_003341"
     CDS             418..1806
                     /gene="frlA"
                     /locus_tag="JNZ57_003341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001324580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine/psicoselysine transporter"
                     /protein_id="HAY8829443.1"
                     /translation="MTANSPLQRVGQEKGIAMGSQELQRKLGFWAVLAIAVGTTVGSG
                     IFVSVGEVAKAAGTPWLTVLTFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGS
                     RPLAFLSGWASFWANDAPSLSIMALAIVSNLGFLTPIDPLPGKFIAAGLIIAFMLLHL
                     RSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGI
                     SATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLLALVISDLMPFDKL
                     ANSETPISDALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFF
                     KCFGHVHPKYNTPDVSIILQGALGLFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWC
                     RKRDDYKPLWRTPAFGLMTTLAIASSLILVASTFVWAPIPGLICAVIVIATGLPAYAF
                     WAKRSRQLNALS"
     gene            1827..2849
                     /gene="frlB"
                     /locus_tag="JNZ57_003342"
                     /pseudo
     CDS             1827..2849
                     /gene="frlB"
                     /locus_tag="JNZ57_003342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417830.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine 6-phosphate deglycase"
     gene            2899..3729
                     /gene="frlC"
                     /locus_tag="JNZ57_003343"
     CDS             2899..3729
                     /gene="frlC"
                     /locus_tag="JNZ57_003343"
                     /EC_number="5.1.3.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine 3-epimerase"
                     /protein_id="HAY8829444.1"
                     /translation="MKTGMFTCGHQRLPIEHAFRDASELGYDGIEIWGGRPHAFAPDL
                     KAGGIKQIKALAQTYQMPIIGYTPETNGYPYNMMLGDEHMRRESLDMIKLAMDMAKEM
                     NAGYTLISAAHAGYLTPPNVIWGRLAENLSELYEYAENIGMDLILEPLTPYESNVVCN
                     ANDVLHALALVPSPRLFSMVDICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASDTH
                     YIPGEGKMPLRELMRDIIERGYEGYCTVELVTMYMNEPRLYARQALERFRALLPEDER
                     "
     gene            3726..4511
                     /gene="frlD"
                     /locus_tag="JNZ57_003344"
     CDS             3726..4511
                     /gene="frlD"
                     /locus_tag="JNZ57_003344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine 6-kinase"
                     /protein_id="HAY8829445.1"
                     /translation="MKTLATIGDNCVDIYPQLNKAFSGGNAVNVAVYCTRYGIQPGCI
                     TWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVELHDNDRVFGDYTEGVMADF
                     ALSEEDYAWLAQYDIVHAAIWGHAEDAFPQLHAAGKLTAFDFSDKWDSPLWQTLVPHL
                     DFAFASAPQEDETLRLKMKAIVARGAGTVIVTLGENGSIAWDGAQFWRQAPEPVTVID
                     TMGAGDSFIAGFLCGWSAGMTLPQAMAQGTACAAKTIQYHGAW"
     gene            4611..5342
                     /gene="phoB"
                     /locus_tag="JNZ57_003345"
     CDS             4611..5342
                     /gene="phoB"
                     /locus_tag="JNZ57_003345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417834.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator PhoB"
                     /protein_id="HAY8829446.1"
                     /translation="MSATDRYSHQLLYATVRQRLLDDIAQGVYQAGQQIPTENELCTQ
                     YNVSRITIRKAISDLVADGVLIRWQGKGTFVQSQKVENALLTVSGFTDFGVSQGKATK
                     EKVIEQERVSAAPFCEKLNIPGNSEVFHLCRVMYLDKEPLFIDSSWIPLSRYPDFDEI
                     YVEGSSTYQLFQERFDTRVVSDKKTIDIFAATRPQAKWLKCELGEPLFRISKIAFDQN
                     DKPVHVSELFCRANRITLTIDNKRH"
     gene            complement(5494..6579)
                     /locus_tag="JNZ57_003346"
     CDS             complement(5494..6579)
                     /locus_tag="JNZ57_003346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HAY8829447.1"
                     /translation="MKTFPLQSLTLIEAQQKQFALVDTICRHFPGAEFLTSGDLGLTP
                     GLNQPRITQRVEQVLADAFHAQAAALVQGAGTGAIRAGLAALLKPGQRLLVHDAPVYP
                     TTRVIVEQMGLTLITVDFNDLSALKQVVDEQQPDAALVQHTRQQPQDSYVLADVLATL
                     RAAGVPALTDDNYAVMKVARIGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRA
                     TLYSGGSQIQGAQALEVLRCLVFAPVMHAVQAGVSERLLALLNGGAVPEVKSAVIANA
                     QSKVLIVEFHQPIAARVLEEAQKRGALPYPVGAESKYEIPPLFYRLSGTFRQANPQSE
                     HCAIRINPNRSGEETVLRILRESIASI"
     gene            complement(6591..>7677)
                     /locus_tag="JNZ57_003347"
     CDS             complement(6591..>7677)
                     /locus_tag="JNZ57_003347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829448.1"
                     /translation="LLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQ
                     LLTALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLVAAVVVLMTRVVVVRY
                     FPHLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYIA
                     IVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVP
                     LIATTALATGVYAVAGFTFVYAVGYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRY
                     PSVRNESDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQK
                     MAAPVVAVMITGILLNVLYWLGLFVPA"
BASE COUNT         1802 a         2140 c         1997 g         1738 t
ORIGIN      
        1 tgtaaatgaa caaatttatt aaagttgcac tggtaggtgc agtactggct acgttaactg
       61 catgtactgg tcatattgaa aaccgtgata agaactgctc ttacgactac ctgctgcacc
      121 cggcaatttc tatttctaaa atcattggcg gttgcggtcc tactgcacag taagtctctg
      181 acagaaatcg gctaacaccg gtttaattgc ccgacgccct ctggattttc cgagggcgta
      241 tttgtttcta tatccttctt gctccccacc cgtaaaaata ttttcacttt aatttcaatt
      301 ggataactac attcattagc cacagcgcga tcctgtgcga aattttgtga tcttcctccg
      361 cattacataa catcatatgt tattatattc atcatgcatt gttatgttac cttttaaatg
      421 actgcaaact ctcccctaca acgtgttgga caagaaaaag gtatcgctat gggaagccag
      481 gaactccaac gcaagctcgg attttgggcc gttcttgcaa tcgccgtcgg gacaaccgtc
      541 ggctccggta tttttgtatc tgtgggtgaa gtggcaaaag cagcgggcac gccgtggctt
      601 acggtgctca cgtttgtcat tggcgggtta attgtgatcc cgcaaatgtg cgtctatgcg
      661 gaactatcca ccgcttatcc ggaaaatggc gcagattatg tttatctgaa aaatgccgga
      721 agccgaccgc tggctttcct ctccggctgg gccagcttct gggccaacga tgcgccgtca
      781 ttgtcgatta tggcgctggc gattgtcagc aatcttggct ttttaacgcc tatcgatccg
      841 ttgcccggta aatttatcgc cgccggatta attatcgcct ttatgttgct acacctgcgc
      901 tccgttgaag gcggcgcagc gtttcagacg ctaattacca tcgccaaaat tatcccgttc
      961 actatcgtca ttggccttgg gatcttctgg tttaaagcgg agaattttgc cgcccctacc
     1021 accactgcga ttggcgcaac gggcagcttt atggcgctgc tggcggggat ctctgccacc
     1081 agttggtcgt ataccggcat ggcctctatc tgttatatga ccggcgaaat taaaaacccc
     1141 ggaaaaacca tgccacgagc gctgattggt tcctgtctgc tggttctggt gctctacacc
     1201 ctgctggcgc tggtgatttc cgacctgatg cccttcgaca aactcgccaa ttctgaaacg
     1261 ccgatttccg acgccctgac ctggatcccc gcactcggca gcaccgctgg gatctttgtt
     1321 gccatcacgg cgatgatcgt cattcttggt tcgctttcca gctgcgtgat gtaccagccg
     1381 cggctggaat acgcgatggc gaaagacaac ctgttcttta aatgcttcgg ccatgtgcat
     1441 ccgaaataca acacgccgga tgtctccatc atcctgcaag gggcgctggg gctcttcttc
     1501 atcttcgttt ccgatctcac cagcctgctg ggttatttca ccctggtgat gtgtttcaaa
     1561 aataccctca ccttcggctc catcatctgg tgtcgtaaac gcgacgatta caaaccgctg
     1621 tggcgtactc cggctttcgg gctgatgacc accctcgcca ttgcgtcaag cctcattctg
     1681 gtcgcctcaa cctttgtctg ggcaccgatt cccggcctta tctgcgccgt catcgttatt
     1741 gctactggtc tgcctgctta cgccttctgg gcgaagcgta gccgccagct caacgctttg
     1801 tcgtaatgtt atctggagaa aataaaatgt tggatattga taaaagcacc gtggactttc
     1861 tggtcaccga aaatatggtt caggaagtgg aaaaagttct cagccatgac gttccgctgg
     1921 tgcacgccat cgtggaagag atggtgacgc gcgacattga tcgtatttat ttcgttgcct
     1981 gcggctcgcc actcaacgcg gcgcaagcgg cgaaacatct ggcggatcgc ttttccgatc
     2041 ttcaggtcta cgccatttcc ggctgggagt tctgcgataa caccccgtat cgcctcgacg
     2101 atcgttgcgc ggtgattggc gtttctgact acggtaaaac ggaagaggta atcaaagcgc
     2161 tggagctggg ccgggcctgc ggcgcactca ctgcggcgtt caccaaacgc gcggacagcc
     2221 cgattacctc ggcggcggaa tttagcattg attatcaggc cgactgtatc tgggaaattc
     2281 acctgctgct ctgctacagc gtggtgctgg agatgatcac ccgcctcgcg ccgaacgcgg
     2341 aaatcggcaa gatcaaaaac gatctcaagc agttgccgaa tgcgctcggt catctggtac
     2401 gtacctagga agaaaaaggc cgccagcttg gtgaactggc cagccagtgg ccgatgattt
     2461 ataccgttgc tgcgggtccg ctgcgtccgc tgggttacaa agaaggcatt gtaacgctga
     2521 tggaatttac ctggacgcac ggctgcgtga ttgagagcgg agagttccgc catggcccgc
     2581 tggagattgt cgaaccgggc gttccgttcc tgttcctgct cggcaatgat gaaagtcgcc
     2641 acaccaccga acgcgccatt aactttgtta aacagcgtac tgacaacgtg atcgtcatcg
     2701 attacgccga aatttcgcaa gggctgcacc cgtggctggc accgttcctg atgttcgtgc
     2761 caatggagtg gctctgctac tacctgtcta tttacaaaga tcacaacccg gatgaacgcc
     2821 gctattacgg tggtctggtg gaatattaat ccctcgcccg gcccggcaac gggccggatt
     2881 tacgcaagga gttacccgat gaaaacaggt atgtttacct gcggccacca gcggctgcct
     2941 attgaacacg catttcgtga tgcaagcgag ctgggttacg acggcatcga aatttggggc
     3001 ggtcgcccgc acgcgttcgc gccggactta aaagcgggcg gcatcaaaca aatcaaggcg
     3061 ctggcgcaga cgtatcagat gccgattatc ggctatacgc cagaaaccaa cggctatccg
     3121 tataacatga tgctgggcga tgaacatatg cgtcgcgaaa gcctcgacat gatcaagctg
     3181 gcgatggata tggcaaaaga gatgaacgcg ggttatacgc tgatttccgc ggcccacgcg
     3241 ggctatctca cgccacctaa tgttatctgg ggacggctgg cagagaacct aagcgaactg
     3301 tatgagtacg cggaaaacat cggcatggat ctaatcctcg aaccgttaac gccgtatgaa
     3361 tcgaacgtcg tgtgtaatgc taatgatgtg cttcatgcgc tggcgctggt gccttcgccg
     3421 cgcctgttca gcatggtcga catttgcgcg ccgtatgtcc aggcggaacc ggtgatgagt
     3481 tatttcgaca aactgggcga taaattacgt catctgcata ttgtcgacag cgacggggcc
     3541 agcgacacgc attacattcc tggagaaggc aaaatgccgc tgcgggaact gatgcgcgat
     3601 attattgagc ggggctatga gggttactgt acggtggagc tggtgacgat gtatatgaac
     3661 gagcccagac tctatgcccg ccaggcgctg gaacgctttc gcgcgctgct gccggaggat
     3721 gagagatgaa aaccctggcg acaatcggcg ataactgcgt cgatatctac ccgcaactga
     3781 ataaagcgtt ttctggcggt aatgcggtca atgtggcggt gtactgcact cgctacggca
     3841 tacagccggg atgcattacc tgggtgggtg acgatgacta cggcacaaag ctgaagcagg
     3901 atctcgcccg catgggcgtc gatatcagcc atgtccatac gaaacacggc gttaccgcac
     3961 aaactcaggt ggaactgcac gacaatgatc gcgtttttgg cgactacacc gaaggcgtga
     4021 tggccgactt tgccctgagt gaagaggatt acgcctggct ggcgcagtat gacattgtgc
     4081 acgcggcaat ctggggacat gcggaagacg cattcccaca gctgcacgct gcgggcaaac
     4141 ttaccgcttt cgacttctcc gacaagtggg acagcccgct ctggcagaca ctggtgccgc
     4201 atctcgattt tgcctttgcc tccgcaccgc aagaagacga aacgctgcgt ctgaagatga
     4261 aagcgattgt tgcccgtggc gcaggaaccg tgattgtcac gctgggtgaa aacggcagca
     4321 ttgcctggga tggcgcgcag ttctggcgtc aggctcctga accggtgacg gttatcgaca
     4381 ccatgggtgc cggagattcg ttcattgccg gattcctttg cggctggtct gcggggatga
     4441 cattaccgca ggcgatggcg cagggaacgg cgtgcgcggc gaaaaccatt cagtaccacg
     4501 gtgcctggta ggtataacgt tggcgtgagc atcttcacgc caacgtgctg ttacttgctg
     4561 gaaaacgacc ctataatccg agtaattcat tctttatttc agggtcgatt atgtcagcta
     4621 cggaccgcta ctctcatcaa ctcctctacg ctaccgtccg ccagcgactg ctggatgata
     4681 tcgcgcaggg ggtttaccag gccgggcaac agatccctac cgaaaacgag ctttgtacac
     4741 aatataacgt cagccgcatt accattcgca aagccatcag cgacttagtg gcggacggcg
     4801 tactgatccg ctggcaggga aaaggcacct ttgtacaaag ccagaaagtt gaaaacgccc
     4861 tgcttactgt cagtggtttt accgattttg gcgtctcaca aggcaaggcg acgaaagaga
     4921 aagtgatcga acaggaacgg gtcagcgccg cgccgttttg cgaaaagctg aacatccccg
     4981 gaaacagcga agtgttccat ctctgccggg tgatgtatct cgataaagag ccgctgttta
     5041 ttgatagttc atggatcccg ctgtcgcgtt atcctgactt tgatgagatt tacgtcgaag
     5101 gaagctccac ctatcagtta tttcaggagc gttttgacac gcgagtggtc agcgacaaaa
     5161 agaccatcga tatctttgcc gccacccgcc cgcaggcaaa atggctgaaa tgcgaactgg
     5221 gcgaaccgtt gtttcgcatc agcaaaatcg cctttgatca gaatgacaaa ccggtgcacg
     5281 tctccgaact cttctgccgc gccaatcgca tcaccttaac tattgataat aaaagacatt
     5341 aaccgtaggc cggataagat gcgccagcat cgcatccggc gatgctggcg cgttgaattt
     5401 tacatcccgt acgttcccct caccctaacc ctctccccaa aggggcgagg ggaccgttca
     5461 gtacggaatt tagcttgacg gtgctatcca gcattaaata ctggcaatac tctcacgcaa
     5521 aatccgcagc accgtctctt caccgctgcg attcgggtta atgcgaatcg cacaatgttc
     5581 tgattgtgga ttcgcctggc gaaacgttcc ggaaaggcga taaaagagcg gcgggatttc
     5641 atatttcgac tctgcaccca ccgggtaagg caaggcaccg cgcttttgcg cctcttccag
     5701 cactctggcg gcaatcggct gatgaaactc gacaatcaac accttcgact gcgcattagc
     5761 aatcaccgcg cttttcactt ccggcaccgc accaccgtta agcaaagcca gcaaccgttc
     5821 agatacccct gcctgcaccg cgtgcatcac tggcgcaaac accagacaac gcaatacttc
     5881 cagcgcctgt gcgccctgga tctggctacc gccggagtaa agcgtggcgc gaatacggtt
     5941 gataacatca gcatcgccga ccactgcacc aacaccctct ggcccaaata gcttgaagca
     6001 ggaaaatgtc gagacattcg cgccgcattc acagccgatt cgcgccacct tcatcaccgc
     6061 atagttgtca tcggttaacg ctggaacacc tgccgcgcgc aacgttgcca gcacatctgc
     6121 cagcacgtag ctgtcctgcg gctgctggcg cgtatgctgc accagcgccg catccggttg
     6181 ttgctcgtcg acgacctgct tcagtgccga caggtcattg aaatcaacag taataagcgt
     6241 cagccccatc tgctcaacaa taacccgtgt cgtcgggtaa acaggcgcgt catgcaccag
     6301 aagacgctgc cccggtttga gcaaagctgc cagcccggcg cgaatcgcgc cagtccccgc
     6361 gccctgcacc agcgccgcag cctgtgcgtg aaatgcatca gccagcacct gctccacccg
     6421 ttgggtaata cgcggttgat tcagccccgg cgttaagccc aaatcaccgc tggttagaaa
     6481 ctccgcgccg ggaaagtgac ggcaaatcgt gtccaccagc gcaaactgct tttgctgcgc
     6541 ctcaataagc gtcaggcttt gcagaggaaa cgtcttcata ggtgccttcc ttaagccgga
     6601 acgaacaggc caagccagta aagaacattc agcagaatac cggtgatcat tactgccacg
     6661 accggtgccg ccattttctg taccggacgg cccagggatt cgttgaggaa gtaaatggca
     6721 accgcgatag agaatccggt ataacccgcc atcttaattg ctgcgaaaat cgaaccgacc
     6781 agcagcgcca cttccatcag catattcatg gcgttacgga tgttatccga ctcattacgc
     6841 accgacgggt agcgtcccag ccatttgccg atagaacgaa gcagcaagac ttccgccgaa
     6901 ataaccactg cgcctaatac cgctgcaacc atcggattcg gcgagagata gcccaccgca
     6961 taaacaaagg taaagcccgc aactgcatac acacccgttg ctaaggcggt ggtggcaatc
     7021 aacggtacaa aacccagccc gcgcataaat tctgccagtg ccgcctggtt gatcagcgtt
     7081 tgcgattgtt ccggcgttac gcctgcggag tacgctttct ccagagtgaa gatcgacact
     7141 tcactgccgg cgaaaatctt catgctggca acggcggcaa tcaatgctcc cacgatggcg
     7201 atatagggta agtttttgat aatccgcgac gtgcgttctt caaacaccga aagcccgctg
     7261 gcatcaatat cattttcatc acgatgacgc aggtcgtgag ttatcgcgat ccccagcagc
     7321 atcaccatgc caataaagat ttcgatggat tcagggttaa gatgtgggaa atagcgcacg
     7381 actaccacac gggtcatcag aacaaccacg gcggcgacca gactttgctt ccagccaaac
     7441 tggtagaaaa tcgccaccag cggaaacagt gcaaaagcag aaactaccgg cgagcttaat
     7501 tccccgaggc tacctaatac atccaccggc agcgcggtca gcagctggtt tactggcaac
     7561 aggcaagtaa ggatcaacac gccccagata gcgccaagac caaacgccat caggctgttt
     7621 atcgccagta cgccgaggat atcggtagga agaaagagta accatgcgtt gagcagc
//
LOCUS       DADMHC010000184         7668 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.187, whole genome shotgun sequence.
ACCESSION   DADMHC010000184 DADMHC010000000
VERSION     DADMHC010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7668)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7668)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7668
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.187"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            629..1399
                     /locus_tag="JNZ57_003348"
     CDS             629..1399
                     /locus_tag="JNZ57_003348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418784.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HAY8829449.1"
                     /translation="MQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGRALGMD
                     SVESSISSNAIVLTTIKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDYKGV
                     EKRFSQIQPLRYPRWLVALMVGLSCACFCKLNKGGWDGAVITFFASTAAMYIRQLLAQ
                     RHLHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMF
                     KGHINTGLARWAIASLLTLATCVGVVMALTIWGLRGWV"
     gene            1390..1863
                     /locus_tag="JNZ57_003349"
     CDS             1390..1863
                     /locus_tag="JNZ57_003349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418783.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter"
                     /protein_id="HAY8829450.1"
                     /translation="MGVIEFLFALAQDMILAAIPAVGFAMVFNVPVRALRWCALLGAI
                     GHGSRMILMTSGLNIEWSTFMASMLVGTIGIQWSRWYLAHPKVFTVAAVIPMFPGISA
                     YTAMISAVKISQLGYSEPLMITLLTNFLTASSIVGALSIGLSIPGLWLYRKRPRV"
     gene            1971..2510
                     /gene="dnaT"
                     /locus_tag="JNZ57_003350"
     CDS             1971..2510
                     /gene="dnaT"
                     /locus_tag="JNZ57_003350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein DnaT"
                     /protein_id="HAY8829451.1"
                     /translation="MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYA
                     VTPARLAELLALEEKLARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFI
                     RLAALWGVALREPVTTEELASFIAYWQAEGKVFHHVQWQQKLARSLQIGRASNGGLPK
                     RDVNTVSEPDSQIPPGFRG"
     gene            2513..3250
                     /gene="dnaC"
                     /locus_tag="JNZ57_003351"
     CDS             2513..3250
                     /gene="dnaC"
                     /locus_tag="JNZ57_003351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001731874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication protein DnaC"
                     /protein_id="HAY8829452.1"
                     /translation="MKNVGDLMQRLQKMMPAHIKPAFKTGEELLAWQKEQGAIRSAAL
                     ERENRAMKMQRTFNRSGIRPLHQNCSFENYRVECEGQMNALSKARQYVEEFDGNIASF
                     IFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIMSAMKDTFRNSGTSEEQLLNDL
                     SNVDLLVIDEIGVQTESKYEKVIINQIVDRRSSSKRPTGMLTNSNMEEMTKLLGERVM
                     DRMRLGNSLWVIFNWDSYRSRVTGKEY"
     gene            3299..3793
                     /locus_tag="JNZ57_003352"
     CDS             3299..3793
                     /locus_tag="JNZ57_003352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418780.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2501 domain-containing protein"
                     /protein_id="HAY8829453.1"
                     /translation="MMKTVKHLLCCAIAASALISTGVHAASWKDALSSAASELGNQNS
                     TTQEGGWSLASLTNLLSSGNQALSADNMNNAAGILQYCAKQKLASVTDAENIKNQVLE
                     KLGLNSEEQKEDTNYLDGIQGLLKTKDGQQLNLDNIGTTPLAEKVKTKACDLVLKQGL
                     NFIS"
     gene            4047..6338
                     /gene="opgB"
                     /locus_tag="JNZ57_003353"
     CDS             4047..6338
                     /gene="opgB"
                     /locus_tag="JNZ57_003353"
                     /EC_number="2.7.8.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418779.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerol--membrane-oligosaccharide
                     glycerophosphotransferase"
                     /protein_id="HAY8829454.1"
                     /translation="MSELLSFALFLASVLIYAWKAGRNTWWFAATLTVLGLFVVLNIT
                     LFASDYFTGDGINDAVLYTLTNSLTGAGVSKYILPGIGIVLGLTAVFGALGWILRHRR
                     HHPHHFGYSLLALLLALGSVDASPAFRQITELVKSQSRDGDPDFAAYYKEPSKTIPDP
                     KLNLVYIYGESLERTYFDNEAFPDLTPELGALKNEGLDFSHTQQLPGTDYTIAGMVAS
                     QCGIPLFAPFEGNASASVSSFFPQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKS
                     HGFDHLYGSEELKSVVADPHYRNDWGFYDDTVLDEAWKKFEELSRSGQRFSLFTLTVD
                     THHPDGFISRTCNRKKYDFDGKPNQSFSAVSCSQENIAAFINKIKASPWFKDTVIVVS
                     SDHLAMNNTAWKYLNKQDRNNLFFVIRGDKPQQETLAVKRNTMDNGATVLDILGGDNY
                     LGLGRSSLSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGS
                     HFRLPLLLRVSDKRVEPLPESEYSAPLRFQLADFAPRDNFVWVDRCYKMAQLWAPELA
                     LSTDWCVSQGQLGGQQIVQHVDKTTWQGKTAFKDTVIDMARYKGNVDTLKIVDNDIRY
                     KADSFIFNVAGAPEEVKQFSGISRPESWGRWSNAQLGDEVKIEYKHPLPKKFDLVITA
                     KAYGNNASRPIPVRVGNEEQTLVLGNEVTTTTLHFDNPTDADTLVIVPPEPVSTNEGN
                     ILGHSPRKLGIGMVEIKVVEREG"
     gene            complement(6477..7499)
                     /locus_tag="JNZ57_003354"
     CDS             complement(6477..7499)
                     /locus_tag="JNZ57_003354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase family
                     protein"
                     /protein_id="HAY8829455.1"
                     /translation="MSTMNVLICQQPKELVWKQREIPIPGDNEALIKIKSVGICGTDI
                     HAWGGNQPFFSYPRVLGHEICGEIVRLGKNIADLKNGQQVAVIPYVACQQCPACKSGR
                     TNCCEKISVIGVHQDGGFSEYLSVPVANILPADGIDPQAAALIEPFAISAHAVRRAAI
                     APGEQVLVVGAGPIGLGAAAIAKADGAQVVVADTSPARREHVATRLELPLLDPSAEDF
                     DAQLQAQFGGSLAQKVIDATGNQHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHK
                     KETTMMGSRNATPEDFAKVGRLMAEGKITADMMLTHRYPFATLAETYERDVINNRELI
                     KGVITF"
BASE COUNT         1969 a         1969 c         1856 g         1874 t
ORIGIN      
        1 ctggcaacat atttcctcca catccactgt ctaaaaatca tgatggttta ttcaggatat
       61 tcattcctta aatgtttcca gcaaattaat agattaagcg aataaattat ccttagcatt
      121 cactttcata tcagcatact cctgctgcac aacaactcca ctgcatgtgt cagaaggtta
      181 gcatcaaatg ataacctggt gaaatagcct ggagacattt aaaatatcta cattaagttg
      241 ttaggaatac ttaatgaaaa acagaaatca cattcattta atttataatt aaatgatatc
      301 ccttcccgca gaatgaaaaa tcacacaacc aatatttatt caatgaaatc tgatggtttt
      361 aacttgttaa cattaaaaaa cgtgcccggt tatctattat cctgattcgt aaaggccaaa
      421 caataaattc attatagtga taatattcat gtgatagttt gtttgcggcg agagataatt
      481 cgctttttat caccgagctt gtcccgataa ccaggattaa tcagcgcaat tttgatctta
      541 acctaccgca aaacaaccgt gcttcatgat acaaatggat tctcattatc tgaacaatac
      601 gcagcacgtc tatgacaaag ggcgagttat gcaaactgag caacagcgag ccgtaacacg
      661 gctttgtatc cagtgtggat tatttctttt gcaacatggt gcggaaagcg cgttggttga
      721 tgagctttcc tcacgactgg gtcgggcgtt ggggatggac agcgtcgaaa gttctatctc
      781 ttcgaacgcc atagtgctga caaccattaa agatgggcaa tgcctgacat cgacacgtaa
      841 aaatcacgat cgcggcatta atatgcatgt ggtgactgaa gtccagcaca ttgtgattct
      901 ggcggagcac catctgctgg attacaaagg cgtagagaaa cgatttagcc aaattcagcc
      961 attacgttac ccaagatggc tggtagcctt aatggttggc ctttcttgcg cctgtttctg
     1021 caaactcaat aaaggtggct gggatggtgc cgtcatcacc ttctttgcca gtacggccgc
     1081 gatgtatatc cgccagctgc tggcacaacg tcatcttcat ccgcagatca acttttgcct
     1141 caccgctttc gccgccacca ccatttccgg attgcttttg caacttccca ctttcagcaa
     1201 tacacccact atcgcgatgg ccgccagcgt tctgctgctg gtgccggggt ttccgttgat
     1261 taatgccgtc gccgatatgt ttaaaggcca catcaatacc ggactggcac gctgggcgat
     1321 cgccagtctg ctgacactgg ctacctgcgt cggcgtggtg atggcactga cgatttgggg
     1381 gctacgcgga tgggtgtgat cgagtttctg tttgcattgg cgcaggatat gatcctcgcc
     1441 gccattccag cggtcggctt tgcgatggtg ttcaacgttc ccgttcgggc attacgctgg
     1501 tgtgcgctgc ttggcgcgat tggtcatggt tcacgaatga tcttaatgac cagcgggctg
     1561 aatattgagt ggtcaacctt tatggcctcc atgctggtcg gcaccattgg tattcaatgg
     1621 tcgcgctggt atctggcgca tccgaaagtg tttaccgtgg cggctgttat ccctatgttc
     1681 ccgggcatat cggcttatac cgcaatgatt tcggcggtaa aaatcagcca gttaggttac
     1741 agcgaaccgt tgatgattac cctgttaacc aactttctta cagcttcatc gattgttggt
     1801 gcgttatcca tcggtctttc cattcctgga ttatggttgt accgcaagcg ccctcgcgta
     1861 taaaattgcc tcgcttaaag cacacggatg agagacagcc tcctctcctc cgtgtgttac
     1921 tataaaagtt atctcccttc tcgttcatcg ttccatattt gagaaacagt atgtcttcca
     1981 gagttttgac cccggacgtc gttggtattg acgccctggt acacgatcac caaaccgttc
     2041 tggcaaaagc tgaaggcggt gtggttgccg tatttgctaa caatgccccg gcgttttatg
     2101 ccgtcacgcc tgcacgcctg gctgaactgc tggcgctgga agaaaagctg gcgcgtccgg
     2161 gaagcgatgt cgctctggac gatcaactct atcaggaacc gcaagccgct cccgttgctg
     2221 tacccatggg gaaattcgcc atgtatccgg actggcaacc cgatgccgat tttatccgcc
     2281 tggcggcgct atggggtgtg gcactaagag agccggtgac caccgaagaa ctggcctcat
     2341 tcattgccta ctggcaggcg gaaggtaaag tctttcacca tgtgcagtgg caacaaaaac
     2401 tggcgcgcag cctgcaaatc ggtcgtgcca gcaacggcgg actgccgaaa cgagatgtga
     2461 atacggtcag cgaacctgac agtcaaattc caccaggatt cagagggtaa cgatgaaaaa
     2521 cgttggcgac ctgatgcaac gcctgcaaaa aatgatgcct gcccatatca aacctgcatt
     2581 caaaacgggt gaagaactac tggcctggca gaaagaacaa ggagcgatcc gctccgccgc
     2641 tctcgaacgt gaaaatcggg cgatgaaaat gcagcgcacc tttaaccgct ccggtattcg
     2701 gccactgcat cagaactgct cctttgagaa ctatcgcgtt gagtgtgaag ggcagatgaa
     2761 tgcgttaagc aaagcgcgcc agtacgtcga agagtttgac ggcaacatcg ccagcttcat
     2821 cttttctggt aagccaggaa ccggcaaaaa ccatctggcg gcggcaatct gcaacgagct
     2881 gctgctacgc ggtaaatccg tattgatcat caccgtggcc gatattatgt cggcgatgaa
     2941 agataccttc aggaatagcg gtaccagtga agaacaactg cttaacgatc tgagcaacgt
     3001 tgatctgctg gtgatcgatg agatcggcgt gcagaccgaa tcgaaatacg aaaaagtgat
     3061 catcaaccag atcgtcgatc gccgctcttc ttccaaacgc ccaaccggga tgctgaccaa
     3121 cagtaatatg gaagagatga ccaagttgct gggcgaacgc gtgatggacc gtatgcgcct
     3181 gggtaacagt ttgtgggtga tcttcaactg ggatagctac cgtagccggg taacaggtaa
     3241 agagtattaa tccccgtttc tggcggtata ctgcgacaca attccacctt gagtaatgat
     3301 gatgaaaact gttaaacatc ttctgtgctg tgccattgcc gccagcgcat taatttccac
     3361 cggggtgcat gctgcgtcct ggaaagatgc gctctccagc gccgccagcg aacttggcaa
     3421 ccaaaacagc acgacacagg aaggcggttg gtcgctcgcg tcattaacta acttgcttag
     3481 cagcgggaac caggccttaa gcgcagataa catgaacaac gccgcaggca ttctgcaata
     3541 ctgcgcgaag caaaagctgg cgtcggtaac cgatgccgaa aacatcaaga accaggtgct
     3601 ggaaaagctg ggcctgaaca gtgaagagca aaaagaagac accaactatc tggatggcat
     3661 tcagggtttg ctgaaaacca aagatggtca gcaactcaat ctggataaca tcggaacgac
     3721 tccgctggca gaaaaggtga aaaccaaagc ctgcgatctg gtgttaaagc aggggctgaa
     3781 cttcatttcc tgaaccgcga aacgccgcgt tttagctgtt acccggctga cgcggctctc
     3841 tcctgccctt ttccctgctt ctggacgatt ttccccctgt tacacgggaa gcgaccgcga
     3901 tcaaaaaagt ctgtttataa actaattcct aacaacatcg catttttttg acactagaat
     3961 tgcagcaata tggcgacgcc attacattgt tcttctcaaa aagcttaaac gttggctaaa
     4021 cggcccggtt tagtgaggat cgcccgttgt cagaactact ctctttcgcc ctttttctcg
     4081 cctctgtgct gatttacgca tggaaagcgg gacgtaacac ctggtggttt gcagccacat
     4141 taacggtgct ggggctattt gtcgttttaa atatcaccct gtttgccagc gactatttta
     4201 ctggcgatgg tattaacgac gcggttctct ataccttaac caacagcctg accggtgctg
     4261 gcgtcagcaa atacatcctg ccgggtatcg gcattgtgct ggggctgaca gcggtgttcg
     4321 gtgcgctggg ctggatcctg cgccatcgtc gccatcatcc gcaccatttt ggttacagcc
     4381 tgctggcgct cttactggcg ctgggttcgg tggacgccag cccggcattt cgtcagataa
     4441 cggaactggt gaaatcccag tcacgcgatg gcgacccgga ctttgcggct tattataaag
     4501 agccgtcgaa aactatccct gacccgaaac tcaacctggt ttatatctac ggcgaaagtc
     4561 tcgagcggac ctattttgat aacgaagctt tcccggatct cacgcctgaa ctgggcgcgt
     4621 tgaaaaatga aggcctggat ttcagccaca cgcagcagct gccaggaacg gattacacga
     4681 ttgcgggcat ggtggcttct cagtgcggca taccgctgtt tgcccccttt gaaggcaacg
     4741 cctccgcctc tgtctccagc ttcttcccgc agaacatctg tctgggcgat atcctgaaaa
     4801 actcgggtta tcagaactat ttcgtgcagg gcgcgaatct gcgttttgcc ggtaaagatg
     4861 tgttcctgaa gtcgcatggc ttcgaccact tatacggctc agaagagctg aaaagcgtgg
     4921 tggccgaccc gcactatcgc aacgactggg gattctacga cgataccgtt ctcgatgaag
     4981 cgtggaaaaa gtttgaagag ctttcccgct caggtcagcg attctcactg tttaccctga
     5041 cagtcgatac ccatcacccg gatggtttta tctcgcgtac ctgtaaccgc aaaaaatatg
     5101 attttgacgg taagccaaac cagtcattca gcgcggtaag ttgcagccag gagaatatcg
     5161 cggcgtttat caacaaaatc aaagcgtcac cgtggtttaa agataccgtc atcgtcgtct
     5221 cttctgacca tttagcgatg aacaacacgg cgtggaaata cctcaataag caggatcgca
     5281 ataacctgtt ttttgtcatt cgtggcgaca agccgcagca agagacgctg gcagtgaagc
     5341 gtaacacgat ggataacggc gcgacggtgc tggacattct cggtggcgat aactatctcg
     5401 gacttggtcg tagcagttta tccgggcagt cgatgtcgga aatcttcctc aatatcaaag
     5461 agaaaacatt ggcgtggaag ccggatatca tccgcctgtg gaaattccct aaagagatga
     5521 aagagttcac catcgaccag cagaaaaaca tgattgcctt ctcgggtagc catttccgtt
     5581 tgccgctgct gttgcgggtt tcagacaaac gcgtggaacc gctgccggaa agcgaatact
     5641 cagcaccgct gcgtttccag ctggccgatt tcgctccacg cgacaatttc gtctgggttg
     5701 accgttgcta taagatggca caactctggg ctccggaact ggcactctcc accgactggt
     5761 gtgtctcgca agggcagctt ggcggtcagc aaattgttca gcatgttgac aaaacaacat
     5821 ggcagggcaa aacggcattt aaagatacgg tcatcgacat ggcgcgttat aaaggcaatg
     5881 tcgatacgct gaaaattgtt gataacgata ttcgctacaa agccgacagt ttcatcttca
     5941 acgtcgccgg tgcgccagaa gaggtgaaac agtttagtgg gatttcccgt ccagagtcgt
     6001 ggggccgctg gtccaacgcg cagctgggcg atgaagtaaa aatcgagtac aagcatccgc
     6061 tgccaaagaa atttgacctg gtgattaccg ccaaagcata cggcaataac gccagccgtc
     6121 ctattccggt acgcgtaggc aatgaagaac aaacccttgt gctgggcaat gaagtgacca
     6181 ccaccacact gcatttcgat aacccaaccg atgccgacac actggtaatt gtgccgccgg
     6241 aacctgtctc aaccaacgaa gggaatatcc tcggacactc gccgcgtaag ctcgggatcg
     6301 gcatggtgga aattaaagtg gtggaacgtg aaggataatt cctgactgat gtgtaggtcg
     6361 cataaggtgc gacctacaca ccttctgcgg cctacaaaac atcattgaga aacagaaaaa
     6421 aacagcgccc aacacttccc cggacgctgc atggcaactt taataatctc gccttatcag
     6481 aaagtaatta cacccttaat caactcacga ttgttaatca catcgcgctc gtaggtttct
     6541 gccagcgtgg cgaacggata gcgatgggtt aacatcatgt cagcagtgat ttttccttcc
     6601 gccatcagtc gaccgacttt agcaaaatct tccggcgtgg cgttgcggct acccatcatc
     6661 gtcgtttctt ttttatggaa ttccggatcg gagaactgca actcaccttt aaacaggccg
     6721 acaaatacca ccgtgccgcc gtgacgaatc aaattcacgg tgttattcat cgcatgttga
     6781 ttacctgtcg cgtcgatcac tttctgcgcc agcgaaccac caaactgcgc ctgtagctgc
     6841 gcgtcaaaat cttcggctga cgggtccagt aaaggtaatt ccagacgcgt tgccacatgt
     6901 tcacggcgcg ccggactggt atccgccacc accacctgtg cgccatcggc tttagcgatt
     6961 gccgccgcgc ccagaccgat tggccccgcc ccgaccacca gcacctgctc gccgggagca
     7021 atggctgcgc gacgcaccgc atgagcgcta atagcgaaag gttcaatcaa tgctgccgcc
     7081 tgcgggtcaa taccgtctgc gggcaaaatg ttcgccaccg gcacgctcaa atactcacta
     7141 aaaccgccat cctgatgcac gccaatgact gaaatttttt cacagcaatt ggtacgcccg
     7201 cttttacacg ccgggcattg ctgacaggca acataaggga tcacagcaac ttgctgacca
     7261 tttttaagat cagcaatatt tttacccagc ctaacaatct ccccacatat ttcatggcct
     7321 aaaacacgtg gataactaaa aaatggttga tttccacccc aggcatgaat atcggtaccg
     7381 caaatcccga cagacttaat ttttattaat gcttcattgt cacccggaat aggtatctcg
     7441 cgttgtttcc agactaattc tttcggctgc tggcaaatta aaacattcat cgtagacatg
     7501 attcggctct ccattttttg ttgccttaga tatcaatgaa aatgaaaaat ggcagcggaa
     7561 cggaaaatct gttttgtgaa aacacacgca taaaaatgtt ttaaatcggg ttttaatgga
     7621 ctcacaagga ggaaaatatg agtcgttcac aaaatttacg ccacaatg
//
LOCUS       DADMHC010000185         7651 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.188, whole genome shotgun sequence.
ACCESSION   DADMHC010000185 DADMHC010000000
VERSION     DADMHC010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7651
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.188"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            83..1222
                     /locus_tag="JNZ57_003355"
     CDS             83..1222
                     /locus_tag="JNZ57_003355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HAY8829456.1"
                     /translation="MMKSKMKLMPLLVSVTLISGCTVLPGSNMSTMGKDVIKQQDADF
                     DLDKMVNVYPLTPRLIDQLRPRPNVARPNMTLESEIANYQYRVGPGDVLNVTVWDHPE
                     LTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVHVVGKTLAEIRSDITGRLATYIADPQ
                     VDVNIAAFRSQKAYISGQVNKSGQQAITNVPLTILDAINAAGGLTDTADWRNVVLTHN
                     GREERISLQALMQNGDLNQNRLLYPGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSGM
                     TLTEALGNAEGIDMTTSNASGIFVIRPLKGEGGRNGKIANIYQLDMSDATSLVMATEF
                     RLQPYDVVYVTTAPVSRWNRLINQLLPTISGVRYMTDTASDIHNW"
     gene            1228..1671
                     /gene="wzb"
                     /locus_tag="JNZ57_003356"
     CDS             1228..1671
                     /gene="wzb"
                     /locus_tag="JNZ57_003356"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase Wzb"
                     /protein_id="HAY8829457.1"
                     /translation="MFNNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKG
                     ADPTAISVAAEHQLSLEGHCARQISRRLCRNYDLILTMEKRHIERLCEMAPEMRGKVM
                     LFGHWDNECEIPDPYRKSRETFAAVYTLLERSARQWAQALNAEQV"
     gene            1674..3830
                     /gene="wzc"
                     /locus_tag="JNZ57_003357"
                     /pseudo
     CDS             1674..3830
                     /gene="wzc"
                     /locus_tag="JNZ57_003357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310892.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein kinase Wzc"
     gene            3987..4826
                     /gene="wcaA"
                     /locus_tag="JNZ57_003358"
     CDS             3987..4826
                     /gene="wcaA"
                     /locus_tag="JNZ57_003358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaA"
                     /protein_id="HAY8829458.1"
                     /translation="MKDNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCS
                     TSREQLQQYVTALNDPRITYIHNDINSGACAVRNQAIMLAQGEYITGIDDDDEWTPNH
                     LSVFLAHKQQLVTHAFLYANDYVCQGEVYSQPASLPLYPKSPYSRRLFYKRNIIGNQV
                     FTWAWRFKECLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSP
                     KKFSGYFHFYRKHKDKFDRASKKYQLFTLYQIRNKRMTWRTLLTLLSVRNGKRLADGI
                     RGR"
     gene            4829..5317
                     /gene="wcaB"
                     /locus_tag="JNZ57_003359"
     CDS             4829..5317
                     /gene="wcaB"
                     /locus_tag="JNZ57_003359"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis acetyltransferase
                     WcaB"
                     /protein_id="HAY8829459.1"
                     /translation="MLEDLRANSWSLRPCCMVLAYRVAHFCSVWRKKNVLNNLWAAPL
                     LVLYRIITECFFGYEIQAAATIGRRFTIHHGYAVVINKNVVAGDDFTIRHGVTIGNRG
                     ADNMACPHIGNGVELGANVIILGDITIGNNVTVGAGSVVLDSVPDNALVVGEKARVKV
                     IK"
     gene            5314..6537
                     /gene="wcaC"
                     /locus_tag="JNZ57_003360"
     CDS             5314..6537
                     /gene="wcaC"
                     /locus_tag="JNZ57_003360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaC"
                     /protein_id="HAY8829460.1"
                     /translation="MNILKFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGYGKG
                     GKESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFGNFNELYRTITRTPGPVVLHL
                     HVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQK
                     CPTLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRI
                     INNGIDMATEAILADLPPVRETQGKPKIAVVAHDLRYDGKTNQQLVREMMALGDKIEL
                     HTFGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVP
                     VIATHSDAAREVLQKSGGKTVSEEEVLQLVQLSKPEIAQAIFGTTLAEFSQRSRAAYS
                     GQQMLEEYVNFYQNL"
     gene            6512..7651
                     /gene="wcaD"
                     /locus_tag="JNZ57_003361"
                     /pseudo
     CDS             6512..7651
                     /gene="wcaD"
                     /locus_tag="JNZ57_003361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416560.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putative colanic acid polymerase WcaD"
BASE COUNT         1904 a         1915 c         2037 g         1795 t
ORIGIN      
        1 ttaactgcaa ggtaaatgtg catggcgaca ttgctattaa tagtgcacag gataattact
       61 ctgccaaagt gataaataaa caatgatgaa atccaaaatg aaattgatgc cattattggt
      121 gtcagtaacc ttgataagcg gttgcacagt acttccgggc agcaatatgt cgacgatggg
      181 caaagacgtc atcaaacagc aggacgctga tttcgatctc gacaaaatgg tgaatgttta
      241 tccgctgacc ccgcgcctga ttgaccaatt acgcccacgc ccgaatgtag cgcgccccaa
      301 tatgacgctg gaaagcgaga tcgcgaatta ccagtatcgc gtcgggccgg gggacgttct
      361 taatgtcacc gtctgggatc acccggaact caccacgcca gccggtcagt accgcagctc
      421 cagcgacacc ggcaactggg tacagcctga cggcactatg ttttacccgt atatcggcaa
      481 ggttcacgta gtggggaaaa cgctcgctga aatccgcagt gatattaccg ggcgcttagc
      541 gacgtacatc gctgacccgc aggtggacgt taatatcgcc gccttccgct cacaaaaggc
      601 ctatatctcc ggtcaggtga ataaatccgg tcaacaggcg atcaccaacg taccactgac
      661 cattctcgac gccatcaacg ccgcaggtgg cctgaccgac accgctgact ggcgcaacgt
      721 ggtgctaaca cacaatggtc gtgaagaacg catttctttg caggcgctga tgcaaaacgg
      781 cgacctcaat cagaaccgac tgctttatcc cggcgatatt ctctatgtgc cgcgtaatga
      841 tgatctgaaa gtatttgtga tgggtgaagt gaagaaacag agcaccctga aaatggactt
      901 tagcggtatg accctgactg aagccctggg caatgctgaa ggtatcgaca tgaccacctc
      961 caacgccagc ggcatctttg tcattcgtcc gctgaaaggc gagggcgggc gtaacggcaa
     1021 gattgccaat atctaccagc tggatatgtc cgatgcgacg tcgctggtga tggcgacaga
     1081 attccgcctg caaccttatg acgtggtgta tgtcactacc gccccggttt cccgctggaa
     1141 ccgtctgatc aatcagttgc tgccaacaat tagcggtgtc cgttacatga cggatacagc
     1201 cagcgacatt cataactggt aatcgtcatg tttaacaaca tcttagttgt ctgtgtcggc
     1261 aatatttgcc gttccccgac ggcggaacgc ttactgcaac gttatcaccc ggaactgaaa
     1321 gtggagtccg ctggactcgg cgcgctggtc ggtaagggcg ctgaccctac tgctatcagc
     1381 gtcgccgcag aacatcaact gtctctggaa ggtcactgtg cccgtcaaat cagccgccgc
     1441 ctgtgtcgca actatgacct gattttgacc atggaaaagc gccatatcga acgcttatgc
     1501 gagatggcac cggagatgcg cggcaaagtg atgctgtttg gtcactggga taacgaatgt
     1561 gaaatccccg atccgtatcg caaaagccgg gaaacgtttg cagcggtgta cacattactt
     1621 gaacggtctg cccgccagtg ggcgcaggca ttgaacgcag agcaggtata agaatgacag
     1681 aaaaagtaaa acaacatgcc gctccggtaa cgggcagtga tgaaatcgat attggtcgcc
     1741 tggtcggcac cgtcattgaa gcgcgctggt gggtgattgg catcaccgct gtattcgccc
     1801 tttgtgccgt ggtttacacc ttcttcgcca cgccgattta tagtgccgac gcactggtac
     1861 aaatcgagca aagcagcggc aattcgttag tgcaggatat cggatcggcg ttagccaaca
     1921 aaccgcctgc atcggacgcc gagatccagt tgattcgttc gcgcctggtg cttggtaaaa
     1981 cggtggacga tctcgacctc gatattgcgg tgagcaaaaa cacgttcccg attttcggtg
     2041 cgggctggga tcgcctgatg ggacgtcaga acgaaacggt gaaagtgact acctttaacc
     2101 gcccgaaaga gatggcggac caggtgttta cgcttaatgt gctggacaat aaaaactaca
     2161 ccctgagcag tgatggcggc tttagcgccc gtgggcaagc gggccagatg ctgaaaaaag
     2221 aaggcgtcac gctgatggtt gaagccattc acgcccgccc gggcagtgag tttaccgtca
     2281 ccaaatactc cacgttgggg atgatcaacc aactgcaaaa cagcctgacg gtaacggaga
     2341 acggcaaaga cgcaggcgta ctgagcctga cttataccgg tgaagatcgc gaacagatcc
     2401 gcgacattct taacagcatc gcccgtaact atcaggaaca aaatattgag cgcaaatcgg
     2461 cggaagcgtc gaaaagcctc gctttcctcg cgcaacagtt accggaagta cgtagccgcc
     2521 tcgatgttgc cgaaaacaaa ctgaatgcct tccgtcagga taaagattct gttgatctgc
     2581 cgcttgaagc gaaagcggtg ctcgattcga tggtgaacat cgacgcgcag ttgaacgaac
     2641 tgacctttaa agaggcggaa atctccaagc tgtacaccaa agttcacccg gcgtaccgta
     2701 cgctgctgga gaaacgtcag gcgctggaag aagagaaagc caaacttaac ggtcgcgtaa
     2761 cggcgatgcc gaaaacccag caggagattg tgcgcctgac ccgcgatgcc gagtctggtc
     2821 agcaggtcta tatgcaactg ctgaataaag agcaggagct gaaaatcacc gaagccagca
     2881 ccgtcggcga tgtgcgcatt gttgacccgg caatcaccca gcctggcgtg ctgaaaccga
     2941 agaaaggact gattatcctc ggcgcaatta tcctcggcct gatgctctct atcgtgggtg
     3001 tgctgctgcg ctcgttgttt aatcgcggca tcgaaagccc gcaggtgctg gaagaacatg
     3061 gtatcagcgt ctatgccagc atcccgctgt cggaatggca gaaagcgcgc gatagcgtca
     3121 aaaccatcaa agggattaaa cgctataaac agagccagct actggcggtg gggaatccaa
     3181 ccgatctggc gattgaagcc atccgcagtc tgcgtaccag tctgcacttc gcgatgatgc
     3241 aggcgcagaa caatgtgttg atgatgacag gggtgagccc gtcaatcggt aaaacctttg
     3301 tctgcgccaa cctggcggcg gtgatcagtc agaccaataa acgggtgttg ttgatcgact
     3361 gcgatatgcg caaaggctac acccacgagc tgttgggtac caataacgtc aatggcctgt
     3421 cggaaattct gattggccag ggcgatatta ctaccgcagc taaaccgacc tctattgcca
     3481 aatttgacct gatcccgcgc ggtcaggtac cgccaaatcc ttctgaactg ttgatgagcg
     3541 aacgctttgc cgaactggtg aactgggcga gtaaaaacta tgacctggtg ttgattgata
     3601 cgccgccgat tctggcagtg accgatgcgg caattgttgg tcgtcatgtt ggaaccacgt
     3661 taatggtggc gcgttatgcg gtcaacacat tgaaagaagt ggaaaccagt ctgagccgct
     3721 ttgagcaaaa tggtattccg gtgaaagggg tgattctgaa ctccatcttc cgccgcgcca
     3781 gcgcgtatca ggattatggc tattacgaat acgaatataa gtcggatgcg atgctgacgc
     3841 atcttatccg acctaccttc acgccgcatc cggcaagcaa accagctccg taggccggat
     3901 aaggcgctca cgccgcatcc ggcaacagaa cccgtaaaca agcttataaa ccggcagaac
     3961 atctcgacac tccgggagaa caacctatga aagacaatcc gctgatctca atctatatgc
     4021 cgacctggaa ccgccaacaa ctggcgattc gggcgataaa atcggtcctg cgccaggact
     4081 acagcaactg ggagatgatc atcgtggatg attgctccac ctccagggaa caactgcaac
     4141 agtacgtcac cgccctcaac gatccgcgta ttacctacat tcacaacgac attaacagcg
     4201 gggcgtgcgc ggtacgtaac caggcgatta tgctggcgca aggggaatac attaccggga
     4261 tcgatgacga tgatgaatgg acgcccaacc acctgagcgt cttcctcgcc cataaacagc
     4321 aactggtcac tcacgccttt ttgtacgcta acgactacgt atgccaggga gaagtttatt
     4381 cccaaccggc aagcttacca ctgtatccca aatcgccgta ctcacgccgc ctgttctata
     4441 aacgcaatat cattggcaat caggttttta cctgggcgtg gcgtttcaaa gagtgcttgt
     4501 tcgataccga actgaaagca gcacaggatt acgacatctt cctgcggatg gtggtggagt
     4561 atggcgagcc gtggaaagtg gaagaggcga cgcagatcct gcatatcaat cacggtgaaa
     4621 tgcagatcac ctcgtcaccg aaaaaattct ccgggtactt ccacttttac cgcaagcaca
     4681 aagataaatt tgaccgtgca agcaaaaaat atcagctgtt taccctctac cagatccgca
     4741 ataaacgtat gacctggcgc actttgctga cgctgctgtc ggtgcgtaac ggcaaacgtc
     4801 tggctgatgg tattcggggg cgctaaagat gctggaagat ctgcgtgcca acagctggag
     4861 tttacgcccg tgctgcatgg ttcttgccta tcgtgttgct catttttgtt cggtgtggcg
     4921 caaaaagaac gtcctcaaca atctgtgggc ggccccgttg ctggtgctgt atcgcattat
     4981 caccgaatgc tttttcggtt atgaaatcca agctgccgcg accattggcc gtcgctttac
     5041 tatccatcac ggttacgccg tagtgatcaa taaaaacgtg gtggcggggg atgattttac
     5101 cattcgccac ggcgtcacta tcggcaatcg tggtgccgat aacatggcat gtccacacat
     5161 tggcaacggc gtcgaactcg gtgccaacgt cattattctt ggtgatatca cgattggtaa
     5221 caacgtcacc gtgggcgcgg gcagcgtggt gctcgactct gtcccggaca acgcgctggt
     5281 ggtgggagaa aaagcgcgag tgaaggtaat taaatgaata ttttgaaatt taatgtgcga
     5341 ctggcggaag gcggggcagc aggtgtggcg ttagatcttc accagcgtgc gctgcaacag
     5401 gggctggcgt cacattttgt ctacggctac ggctacggca aaggcggcaa agagagcgtc
     5461 agccatcaga actatccgca ggtcatcaaa catacgccgc ggatgaccgc gatggcgaac
     5521 attgcgttgt ttcgtctgtt taatcgcgat ctgttcggca atttcaatga gttatatcgc
     5581 accattactc gcacaccggg cccggtggtc ctgcatttgc atgtgctgca cagctactgg
     5641 ttgaatctta agagcgtggt gcgcttttgc gagaaggtga aaaaccataa accggacgtc
     5701 actctggtct ggacgttaca cgaccactgg agcgttaccg gacgctgcgc ctttaccgac
     5761 ggttgcgaag gctggaaaac gggctgccag aaatgcccga ccttaaataa ctatccgccg
     5821 gtgaagattg atcgcgcgca ccagctggtg gcgggcaaac gccagttatt ccgcgagatg
     5881 ctggcgctgg gctgtcagtt tatttccccc agccagcatg tggctgacgc tttcaatagt
     5941 ctgtacgggc cagggcgttg ccggattatc aataatggta ttgatatggc aaccgaagcg
     6001 attctggcgg acttgcctcc ggtgcgcgaa acccagggca agccgaaaat cgcggtggtg
     6061 gcgcatgacc tgcgttacga cggcaagact aaccagcaac tggtacgtga gatgatggcg
     6121 ctgggcgaca aaattgaact gcataccttt ggtaagttct cgccgttcac cgctggcaac
     6181 gtggttaatc acggctttga aactgacaag cgcaagttga tgagcgcgct caatcaaatg
     6241 gatgcgctgg tgttcagttc tcgcgtcgat aactacccgc tgattttgtg tgaggcgcta
     6301 tcgattggcg tgccggtgat cgccacccat agcgatgcgg cgcgggaagt gctgcaaaaa
     6361 tccggtggta aaaccgtcag tgaagaagag gtgctgcaac tggtgcagtt aagcaaaccg
     6421 gaaatcgcgc aggcgatatt tggtaccacg ctggctgagt tcagccaacg cagccgcgcc
     6481 gcctacagtg gacaacagat gctggaggag tatgtcaact tctatcagaa tctgtagcta
     6541 cctgctgctg ccgctgatct acctgctggt taacgtcaaa atcgcccagc ttggtgaaag
     6601 tttccccatc actatcgtca cttttttacc tgtcttgtta ctgctgtttt tagaacgcat
     6661 cagcgttaaa aaattgatga ttgccttagg gattggtgcg ggactcacgg cgttcaacta
     6721 tctgtttggt cagtcgttgg atgccagtaa atacgtcact tcaaccatgc tgtttgtcta
     6781 tattgtgatc attattggca tggtgtggag tattcgcttt aaaacgattt cgccacacaa
     6841 ccatcgcaag atattatgtt tcttttatct ggtggtcggg ctggtggtgg cgctggcggc
     6901 agtggagatg gcgcaaatta tcctcaccgg tggcagcagt attatggagt cgatttcgaa
     6961 atatctgatt tacagcaaca gctatgtgct gaatttcatt aaattcggcg gcaagcgcac
     7021 gacagcactt tatttcgaac cggcattttt cgctctggca ttaatctcaa tttggctcag
     7081 catcaaacag tttggtatca aaacgcctaa aaccgatgct atgattctcg cagggataat
     7141 attatccgga tcgttttcag gggttatgac ctttatcctg ttttatttgc tggagtgggc
     7201 atttcaatat ctgaataaag aggcgattaa gaaaaattta ccgttggcat tgatttctct
     7261 ggctgtattc ctggttggtg tggtaatcgc gtttccttat atttccaccc gtctgggcga
     7321 tttaggtacg gaaggatcgt catcgtatta tcgtattgtc ggtccgctgg tgatggtcgg
     7381 ttattctttg acccatattg acggtgtagt cagatttggc tcactttatg aatatgtcgc
     7441 atcattcgga atatttaacg gtgcggatgt cggaaaaacc atagacaatg gtttgtatct
     7501 gctgattatt tatttttcct ggttcgcagt gtttttatcg ctgtggtaca tggggaaagt
     7561 gataaaaatg atgatcaacg ctttggtaat gactccaact tactgatagt gttttatgtt
     7621 cagataatgc ccgatgacct tgtcatgcag c
//
LOCUS       DADMHC010000186         7514 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.189, whole genome shotgun sequence.
ACCESSION   DADMHC010000186 DADMHC010000000
VERSION     DADMHC010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7514
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.189"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..101)
                     /locus_tag="JNZ57_003362"
     CDS             complement(<1..101)
                     /locus_tag="JNZ57_003362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxypyruvate isomerase"
                     /protein_id="HAY8829461.1"
                     /translation="MLRFSANLSMLFGEYDFLARFEKAAQCGFRGVE"
     gene            complement(114..1895)
                     /gene="gcl"
                     /locus_tag="JNZ57_003363"
     CDS             complement(114..1895)
                     /gene="gcl"
                     /locus_tag="JNZ57_003363"
                     /EC_number="4.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate carboligase"
                     /protein_id="HAY8829462.1"
                     /translation="MAKMRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIR
                     HILARHVEGASHMAEGYTRATAGNIGVCLGTSGPAGTDMITALYSASADSIPILCITG
                     QAPRARLHKEDFQAVDIEAIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPVLV
                     DLPFDVQVAEIEFDPDMYEPLPVYKPAASRMQIEKAVEMLIQAERPVIVAGGGVINAD
                     AAALLQQFAELTSVPVIPTLMGWGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFG
                     IGNRFANRHTGSVEKYTEGRKIVHIDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVAQ
                     EMQKAGRLPCRKEWVADCQQRKRTLLRKTHFDNVPVKPQRVYEEMNKAFGRDVCYVTT
                     IGLSQIAAAQMLHVFKDRHWINCGQAGPLGWTIPAALGVCAADPKRNVVAISGDFDFQ
                     FLIEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDYCVQLAFENINSSEVNGYG
                     VDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVEVILERVTNISMGSE
                     LDNVMEFEDIADNAVDAPTETCFMHYE"
     gene            complement(1985..2800)
                     /gene="allR"
                     /locus_tag="JNZ57_003364"
     CDS             complement(1985..2800)
                     /gene="allR"
                     /locus_tag="JNZ57_003364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor AllR"
                     /protein_id="HAY8829463.1"
                     /translation="MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVS
                     DISLNLDLPLSTTFRLLKVLQAADFVYQESQLGWWHIGLGVFNVGAAYIHNRDVLSVA
                     GPFMRRLMLLSGETVNVAIRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKAL
                     LYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCI
                     ASAIYDDVGSVVAAISISGPSSRLTEDRFVSQGELVRDTARDISTALGLKAHP"
     gene            complement(2878..3360)
                     /gene="allA"
                     /locus_tag="JNZ57_003365"
     CDS             complement(2878..3360)
                     /gene="allA"
                     /locus_tag="JNZ57_003365"
                     /EC_number="4.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ureidoglycolate lyase"
                     /protein_id="HAY8829464.1"
                     /translation="MKLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALV
                     EILEQDRTLISINRAQPANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDL
                     STLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA
                     "
     gene            3590..4534
                     /gene="allS"
                     /locus_tag="JNZ57_003366"
     CDS             3590..4534
                     /gene="allS"
                     /locus_tag="JNZ57_003366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator AllS"
                     /protein_id="HAY8829465.1"
                     /translation="MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENT
                     GVALFFRTTRSVTLTAAGEHLLSQARDWLSWLSWLSWLESMPSELQQVNDGVERQVNI
                     VINNLLYNPQAVAQLLAWLNERYPFTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEA
                     LANTFSLDPLGSVQWRFVMAADHPLANVEEPLTEAQLRRFPAVNIEDSARTLTKRVAW
                     RLPGQKEIIVPDMETKIAAHLAGVGIGFLPKSLCQSMIDNQQLVSRVIPTMRPPSPLS
                     LAWRKFGSGKAVEDIVTLFTQRRPEISGFLEIFGNPRS"
     gene            4603..5697
                     /gene="mnmH"
                     /locus_tag="JNZ57_003367"
     CDS             4603..5697
                     /gene="mnmH"
                     /locus_tag="JNZ57_003367"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HAY8829466.1"
                     /translation="MQERHTEQDYRALLIADTPIIDVRAPIEFEQGAMPAAINLPLMN
                     NDERAAVGTCYKQQGSDAALALGHKLVAGEIRQQRIDAWRAACLQNPQGILCCARGGQ
                     RSHIVQSWLHAAGIDYPLVEGGYKALRQTAIQATIELAQKPIVLIGGCTGSGKTLLVQ
                     QQPNGVDLEGLARHRGSAFGRTLQPQLSQASFENLLAAEMLKTDARQDLRLWVLEDES
                     RMIGSNHLPECLRERMTQAAIAVVEDPFEIRLERLNEEYFLRMHHDFTHAYGDEQGWQ
                     EYCEYLHHGLSAIKRRLGLQRYNELAAQLDTALTTQLTTGSTDGHLAWLVPLLKEYYD
                     PMYRYQLEKKAEKVVFRGEWAEVAEWVKAR"
     gene            5813..6178
                     /locus_tag="JNZ57_003368"
                     /pseudo
     CDS             5813..6178
                     /locus_tag="JNZ57_003368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014543172.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(6944..7190)
                     /locus_tag="JNZ57_003369"
                     /pseudo
     CDS             complement(6944..7190)
                     /locus_tag="JNZ57_003369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308588.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(7171..>7514)
                     /locus_tag="JNZ57_003370"
     CDS             complement(7171..>7514)
                     /locus_tag="JNZ57_003370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308587.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829467.1"
                     /translation="MKRLNLGGTDQFFHCMAFCRVSKLNDAGVSRSAKGLGYEKEIRD
                     YGLNLFGMYGRKVKLSHSEMIEDNKKDLAVNDHGLTCPSTTDCSDRCSDYINPEHKKT
                     IKALQDAGYLK"
BASE COUNT         1953 a         1916 c         1762 g         1883 t
ORIGIN      
        1 aattcaacgc cgcgaaaacc acactgcgca gctttctcaa aacgggcgag aaaatcatat
       61 tcaccaaata acatcgataa attagcagag aaacgtaaca taatttacct cccttattca
      121 tagtgcatga agcaggtttc agtcggtgcg tccactgcgt tatcggcgat atcttcaaat
      181 tccatgacgt tatccagttc gctgcccatc gaaatattgg tcacacgctc gagaataact
      241 tccacgacta ccggtacccg atattgcgcc attaaggctt tcgcctgttc aaaggctggc
      301 gcaatatctt ccggtttgaa gacgcgaatc gctttacaac ctaaaccttc cgctactttt
      361 acgtggtcga cgccgtaacc gttcacttcg ctggagttga tattctcgaa agcgagttgc
      421 acgcagtagt ccatgtcaaa ggcgcgttgt gactgacgaa tcaggccgag ataggcgtta
      481 ttcaccagca catggatgta cggaatgttg aactgcgcgc caacggctaa ctcttcaatc
      541 aggaactgga agtcaaagtc gccagaaatc gccaccacat tgcgtttcgg atcagcggca
      601 caaaccccta gcgcagccgg aatcgtccag cctaacggac cagcctgacc acagttgatc
      661 cagtggcggt ctttaaagac atgcagcatt tgtgccgcag cgatttgtga cagaccgatg
      721 gtggtgacat aacaaacatc gcgaccaaag gctttgttca tctcttcata cacgcgctgc
      781 ggtttcaccg gcacgttgtc gaagtgggtt ttgcgcagca aagtgcgttt gcgctgctgg
      841 cagtcggcga cccattcttt acgacacggc agacgacccg ctttttgcat ctcctgcgcc
      901 acttcaacca gcagtgtcag cgccgcttta gcatcagaga caatgccgag atccggacac
      961 agcacgcgac caatttgcgt cggctcaata tcgatatgaa cgattttgcg cccttcggtg
     1021 tatttctcta ccgaaccggt atgacggtta gcaaaacggt taccgatacc aaacaccatg
     1081 tcggacgcca gcaacgttgc gttaccgtaa cgatgcgcgg tttgcaggcc gaccatcccg
     1141 gccatcagtt catgatcgtc cgggatacag ccccagccca tcagcgttgg gatcaccgga
     1201 acgctggtca gttcagcaaa ctgttgtaac agtgcagctg cgtcagcatt gattaccccg
     1261 cccccggcaa caatcaccgg acgttcggcc tggattaaca tttctacagc tttttcgatc
     1321 tgcatacggc tggcagcagg tttgtagacc ggcagcggtt cgtacatgtc aggatcaaac
     1381 tcgatttccg caacctgaac gtcgaacggt aaatccacca gtaccggacc cggacgacca
     1441 gaacgcatca ggtgaaatgc ctgttgcagc acgcgaggca ccagcgccgc ttcacgaact
     1501 gtaaccgcca ttttgctgac cggtttagca attgcttcaa tatctacggc ctgaaaatct
     1561 tctttatgca gacgggcgcg cggtgcctgg ccggtaatgc acagaatagg aatggaatca
     1621 gcagaagcgg aatagagcgc ggtgatcatg tccgtgcccg caggaccgga agtccccaga
     1681 catacgccga tattccctgc cgttgcgcgg gtataacctt ccgccatgtg cgaagcacct
     1741 tccacatgac gcgccagaat gtgacgaata ccgccgtgct tacgcatcgc tgagtagaac
     1801 ggattgattg cagctcccgg aacaccgaag gcggtggtga taccttcttt ctccagcaca
     1861 tacattgccg cgtcaacggc tctcattttt gccattttat tcccacccct atttattgga
     1921 aaatttttcc aactttcaaa ttttgtcaaa aaaacccgct ccgcagagcg ggatgcgaca
     1981 gacattatgg atgtgctttc agtcccaacg ccgtgctgat atcgcgggcg gtgtctctga
     2041 ccagctcacc ctgactgaca aaacgatctt ctgtcagtct tgatgaaggc ccggagatgg
     2101 agatagcggc aacaacgcta ccgacatcat cgtaaattgc tgaagctatg caattcagac
     2161 ctacaacatg ctcttcttta tctacggtat agcccagttc acgcgcttgt tccaggtcct
     2221 tcagcaaggt gggcatatcc acaagcgtag ttggcgtaaa ctgctgcaaa ccggtttgca
     2281 gaatgatgct catcaactcc tcttccgcca gcggataaag cagcgctttg cccgcaccgg
     2341 aagcatgcag cggcagacga ctgcccagtg gcgcacacat cctgaccatt gatttacact
     2401 ctaactgacc aattaatact gcttcattgc cgttacggat cgcgacattg accgtttcgc
     2461 cggaaagtaa catcaggcgg cgcataaacg gcccggcgac ggagaggaca tcgcggttat
     2521 ggatgtacgc cgcaccgacg ttaaagacac ctaatcctat atgccaccag cctaattgac
     2581 tttcctgata gacaaaatcc gctgcttgta aaaccttcag caagcgaaag gtcgtggaga
     2641 gcggcaaatc cagattgaga gaaatatcgc taaccgacga acttccccca cttttttcca
     2701 gatattgcag aatcgcaatt ccccgctcta acgcctgtgc gcccttctgt gccacaggct
     2761 ccgcctgtcc tggcctgccg cgccgtctaa cttccgtcat acctacgtta actccgacct
     2821 acaagtgagc ataaacaatg aacaattagt ttatcttatg caagtcggtt gcaggcgtca
     2881 cgcaaaacag agttcctgtt caggaatact ttcaacatca cagttgtcac tgccgccgcg
     2941 atcgatggtc agaaaatcgg tgacgcgctg ccaggcgaaa agtgggtgat gccagacgtt
     3001 acgatggtaa ttcactccct gttcgccgtt ggtgataaac gcccgcagcg ttgacaggtc
     3061 tggtttgtcg tcgcctaacg ccacgaccac cacaaacact tcacctttca tcgggataaa
     3121 ggcctgagtg cccagcggat gacgttcgag ttcgtgaatg gtcagcggca gattcgccgg
     3181 ttgcgcgcgg ttaatgctaa taagcgtacg gtcttgctca agaatctcaa ccagcgccaa
     3241 atcgtggtaa cgctccacca ggccattgtt aatatggaaa aaatcccgtt gctgagtttc
     3301 gattacgtcg ccataagcac taaaggcttc ctgacttaac ggtaatacct gaagtttcat
     3361 ctttttgtcc ttgtaacata attccgttca accaccgccg accggtcagc ttggtttcaa
     3421 taacaggcaa tctaaaacct taagagaaca acatcaatac aaaagttgga atatttttcc
     3481 aaaaccagat ttagtccaca aattgaacag ggttatcatg taaaaatact gataaatcag
     3541 aggataagaa aatcacgcaa cttgcggatt taaaagggga tacctgaaga tgttcgatcc
     3601 agaaaccttg cggactttca ttgcggttgc tgaaacagga agtttttcaa aagcggcaga
     3661 acgattatgt aaaaccacgg cgacgatcag ttatcgcatt aaacttctgg aagagaatac
     3721 cggagtagcg ctgtttttcc gtacgactcg tagcgtaacg ttgacagcgg ctggcgagca
     3781 tctactttcc caggccagag actggctgag ctggctgagc tggctgagct ggctggaaag
     3841 tatgcccagc gagctgcaac aggtgaatga tggcgtggaa cgccaggtga atattgtcat
     3901 caacaacctg ctctataacc cccaggccgt cgcccagttg ctagcgtggc tgaatgaacg
     3961 ttaccccttt acccagtttc acatctcccg acaaatctat atgggcgtct gggactcgct
     4021 attgtacgaa ggtttttcgc tggctatcgg cgtcacggga actgaggcgc tggcaaatac
     4081 ctttagtctt gatcccttag gatcggtgca atggcgattt gtcatggcgg cggatcatcc
     4141 gctggcgaac gttgaagagc cgctaacaga agcgcagttg cgtcgctttc cggcggtcaa
     4201 tattgaagac agcgcccgca ccttaaccaa acgcgtcgcc tggcgattgc cagggcaaaa
     4261 agagattatt gttcctgata tggaaacgaa aatcgccgcc catctggcgg gcgttggcat
     4321 tggttttttg ccaaaatcgc tttgccagtc aatgatcgat aatcaacaac tggtcagccg
     4381 ggtaatccca acgatgcgcc ctccttcgcc attgagtctg gcatggcgca aatttggcag
     4441 cggcaaagcg gtagaagata ttgtgacctt gtttacccag cgcaggccgg aaatcagcgg
     4501 atttttagaa attttcggca acccacgcag ttaaaaatca agtttccttg cgcgttggcg
     4561 cgtaaaatag cgcgcaagct gatttgaggt tcacttttaa ctatgcaaga gagacacacg
     4621 gaacaggact atcgtgccct gctgattgct gatacgccca ttattgatgt tcgcgcccct
     4681 atcgagtttg agcaaggcgc aatgcccgcc gctatcaatc tgccgttaat gaataacgat
     4741 gaacgcgccg ccgttggcac ctgctataaa cagcaagggt cagacgcggc gctggcgctg
     4801 gggcataaac tggtggcggg tgaaattcgt cagcagcgca tagacgcctg gcgggcagcg
     4861 tgcctgcaaa atccgcaagg tattctctgc tgtgcccgtg gcggtcaacg ctcacatatt
     4921 gtgcaaagct ggttgcatgc agcggggatt gattatccgc tggtggaagg cggttataag
     4981 gcactgcgcc agaccgcgat tcaggcgact attgaactgg cacaaaaacc gatagtgctg
     5041 attggcggtt gtaccggcag cggtaaaacg ctgttagtgc agcaacagcc gaacggtgtc
     5101 gatctggaag ggctggcgcg tcatcgcggt tcggcgtttg gtcgcacgtt acaaccacaa
     5161 cttagccagg cgagttttga aaatctgctg gctgccgaaa tgctaaaaac cgacgcccgt
     5221 caggatttgc gcctgtgggt gctggaagat gaaagccgga tgatcggttc gaatcacctg
     5281 ccggaatgtc tgcgcgagcg aatgactcag gcggcgattg cggtggtaga agatccgttt
     5341 gagatccgtc ttgaacgcct gaacgaagag tatttcttgc gtatgcatca tgattttacc
     5401 cacgcgtacg gcgacgaaca gggctggcag gaatattgcg aatacctgca tcacggactt
     5461 tcggctatta agcgtcggct ggggttacag cgctataacg aactcgctgc ccagctggat
     5521 acggcgctga caacgcaact caccaccggc agcaccgacg gtcatctggc ctggctggtg
     5581 ccgttactta aagaatatta cgacccaatg tatcgctatc agcttgagaa aaaagcggaa
     5641 aaagttgtct ttcgcggtga gtgggcggaa gtggcggaat gggttaaggc gcggtaatga
     5701 gggacgtatt tgtattagtc gcgacttgat ctgacacatg gccttgaaag gttgagagtt
     5761 accggttttg atatgagtgt cgaatcctta tccaaaacaa gaggtaactc tcatgcttca
     5821 tactgccaat cccgtcatca aacacaaagc cggtttgctc aatctggctg aagaactcag
     5881 caacgtatca aaagcctgta aaatcatggg cgtttcgcgt gatacgtttt atcgttaccg
     5941 cgaactggtc gctgaaggcg gtgtggatgc gcagattaat cgtagtcgcc gcgctcctaa
     6001 ccttaagaac cgtaccgatg aggcaactga acaggctgtt gttgattacg ccgtcgcttt
     6061 cccgacacat ggtcagcacc gggccagcaa cgagctgcgt aaacaggggg gttttatctc
     6121 cgacagtggt gtccgttctg tctggttact ccataacctt gagaatctca aaagacgata
     6181 ctgaacaaat tttatcaggt gacgttccgt aaaaagttgt atggagttct cgatgcagtc
     6241 ggcgcgacta tcagtacccc cgctgaaccc tggactatcg ggccgccgta ctggggcatg
     6301 tcaccctggc gtgccgctgg ttttccgcta atggtttatt tcctctttct ttcccggcaa
     6361 gaatttattt taatccggaa ggattattta ttttcagata gggactcaca ttaaacacgt
     6421 aacattttaa ttaatgcatg gctgaatatg tattacacaa tgtcagatat cgtaaaagac
     6481 cagtgcaatt ctatgtaaac tctctgactg ttcattttat ttgttgtttc agggtcggaa
     6541 ctcaccctca ataaacaact gaatacgagt agatattcat cgtctgagct atatggcttt
     6601 acacaatagc cgacatgtct tttctcagtc aggaatttta cttttcctca ctacgaagtt
     6661 gacgacttcg atatgggata gactcttaat tcaagcaatt actctgcaca agcatcaggc
     6721 aatccagctc caatatttgt tataaaataa tgcgtaacat taatttcacc aacaaaaaaa
     6781 ggtttacacc atccccttgc cctggtatct taccatattt acaccacact ttttttgtat
     6841 ctggatcatt ctttgatacg attttcgcca cttgttccct ggccctcact gtcaatgttt
     6901 tcttaaacct acccccatca tcatttgtta gggaaaaata agaaaaaaaa taatcatctt
     6961 ctacatttgt gtatattgat atatccaccg ctacgtgcga aaaaaaaatc tgggagccat
     7021 gtaaaaactc catcattttc tggtattgcc atatagttta tgtaatgttt acttacaaga
     7081 gattcatctt tgtataaata aagataagta attacgcata aaacaacaat gattataata
     7141 gcaaaaataa atattatcat ctttgataga ttacttgaga tagccagcat cttgtaaagc
     7201 ctttatcgtt tttttatgct ctggattaat ataatcacta catctatctg agcaatctgt
     7261 tgttgatgga catgtcaacc catggtcatt tacagccaag tcttttttat tatcttcaat
     7321 catttcagaa tgggatagct ttacttttct gccgtacata ccgaacagat ttaacccgta
     7381 atctctaatc tctttttcat aacccagccc tttcgccgat cggctaacac cagcgtcatt
     7441 taatttagac actcgacaaa atgccataca atggaaaaat tgatcagtcc cacctaaatt
     7501 taatctcttc ataa
//
LOCUS       DADMHC010000187         7446 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.190, whole genome shotgun sequence.
ACCESSION   DADMHC010000187 DADMHC010000000
VERSION     DADMHC010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7446)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7446)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7446
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.190"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(196..558)
                     /locus_tag="JNZ57_003371"
     CDS             complement(196..558)
                     /locus_tag="JNZ57_003371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YibL family ribosome-associated protein"
                     /protein_id="HAY8829468.1"
                     /translation="MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKAT
                     LEAEIARLREVHSQKLSKEAQKLMKMPFQRAITKKEQADMGKLKKSVRGLVVVHPMTA
                     LGREMGLQEMTGFSKTAF"
     gene            843..1052
                     /locus_tag="JNZ57_003372"
     CDS             843..1052
                     /locus_tag="JNZ57_003372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829469.1"
                     /translation="MGKLGENVPLLIDKAVDFMASSQAFREYLKKLPPRNAIPSGIPD
                     ESVPLYLQRLEYYRRLYRPKQVEGQ"
     gene            complement(1064..1651)
                     /gene="mtlR"
                     /locus_tag="JNZ57_003373"
     CDS             complement(1064..1651)
                     /gene="mtlR"
                     /locus_tag="JNZ57_003373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor MtlR"
                     /protein_id="HAY8829470.1"
                     /translation="MVDQAQDTLRPNNRLSDMQATMEQTQAFENRVLERLNAGKTVRS
                     FLITAVELLTEAVNLLVLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGVI
                     NRQEYEDAELLMALREELNHDGNEYAFTDDEILGPFGELHCVAALPPPPQFEPADSSL
                     YAMQIQRYQQAVRSTMVLSLTELISKISLKKAFQK"
     gene            complement(1651..2799)
                     /gene="mtlD"
                     /locus_tag="JNZ57_003374"
     CDS             complement(1651..2799)
                     /gene="mtlD"
                     /locus_tag="JNZ57_003374"
                     /EC_number="1.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709374.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HAY8829471.1"
                     /translation="MKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDALNARH
                     SYQVHVVGETEQVDTVSGVNAVSSIGDDVVDLIAQVDLVTTAVGPVVLERIAPAIAKG
                     LVKRKEQGNESPLNIIACENMVRGTTQLKGHVMNALPEDAKAWVEEHVGFVDSAVDRI
                     VPPSASATNDPLEVTVETFSEWIVDKTQFKGALPNIPSMELTDNLMAFVERKLFTLNT
                     GHAITAYLGKLAGHQTIRDAILDEKIRAVVKGAMEESGAVLIKRYGFDADKHAAYIQK
                     ILGRFENPYLKDDVERVGRQPLRKLSAGDRLIKPLLGTLEYSLPHKNLIQGIAGAMHF
                     RSEDDPQAQELAALIADKGPQAALAQISGLDANSEVVSEAVTAYKAMQ"
     gene            complement(3029..4942)
                     /locus_tag="JNZ57_003375"
     CDS             complement(3029..4942)
                     /locus_tag="JNZ57_003375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICBA"
                     /protein_id="HAY8829472.1"
                     /translation="MSSDIKIKVQSFGRFLSNMVMPNIGAFIAWGIITALFIPTGWLP
                     NETLAKLVGPMITYLLPLLIGYTGGKLVGGERGGVVGAITTMGVIVGADMPMFLGSMI
                     AGPLGGWCIKHFDRWVDGKIKSGFEMLVNNFSAGIIGMILAILAFLGIGPIVEALSKM
                     LAAGVNFMVVHDMLPLASIFVEPAKILFLNNAINHGIFSPLGIQQSHELGKSIFFLIE
                     ANPGPGMGVLLAYMFFGRGSAKQSAGGAAIIHFLGGIHEIYFPYVLMNPRLILAVILG
                     GMTGVFTLTILGGGLVSPASPGSILAVLAMTPKGAYFANIAGVCAAMAVSFVVSAILL
                     KTSKVKEEDDIEAATRRMQDMKAESKGTSPLSAGDVTNDLSHVRKIIVACDAGMGSSA
                     MGAGVLRKKIQDAGLSQISVTNSAINNLPPDVDLVITHRDLTERAMRQVPQAQHISLT
                     NFLDSGLYTSLTERLVAAQRHTENEVKVKDSLKDSFDDSSANLFKLGAENIFLGRKAA
                     TKEEAIRFAGEQLVKGGYVEPEYVQAMLDREKLTPTYLGESIAVPHGTVEAKDRVLKT
                     GVVFCQYPEGVRFGEEEDDIARLVIGIAARNNEHIQVITSLTNALDDESVIERLAHTT
                     SVDEVLELLAGRK"
     gene            5479..5841
                     /locus_tag="JNZ57_003376"
     CDS             5479..5841
                     /locus_tag="JNZ57_003376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3302 domain-containing protein"
                     /protein_id="HAY8829473.1"
                     /translation="MFLNYFALGVLIFVFLVIFYGIIAIHDIPYLIAKKRNHPHADAI
                     HTAGWVSLFTLHVIWPFLWIWATLYQPERGWGMQSHVASQEKATDPEIASLSDRISRL
                     EHQLAAEKKTDYSTFPEI"
     gene            5844..6980
                     /locus_tag="JNZ57_003377"
     CDS             5844..6980
                     /locus_tag="JNZ57_003377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HAY8829474.1"
                     /translation="MDLLIVLTYVALAWAVFKIFRIPVNQWTLATAALGGVFLVSGLI
                     LLMNYNHPYTFTAQKAVIAIPITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQAR
                     VDRLQADLMTATHNIKTLRAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFS
                     ERDIDDARQNFLAQDALVKGSVAEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLE
                     QTVIRAPSNGYVTQVLIRPGTYAAALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGD
                     DAEVVFNALPRQVFHGKLTSILPVVPGGSYQAQGGLQSLTVVPGTDGVLGTIELDPND
                     DIDALLDGIYAQVAVYSDHFSHVSVMRKVLLRMTSWMHYLYLDH"
BASE COUNT         1814 a         1861 c         1849 g         1922 t
ORIGIN      
        1 tcttctatat atttttattg tttataggtg gctatttcgg taaaaatgca ttttcagaat
       61 atcaaccagc ggtaaatcga cgtaaaggga gtgaattgtt tggtaattag gcgagtagac
      121 aggagagtcc ccgcattgac cagctaaggc aagccagatg cgggttgata tgatcgaacc
      181 agtcgtctga ggcgcttaaa acgcagtctt agagaatcca gtcatctcct gcaggcccat
      241 ttcacggccc agcgcggtca ttgggtgcac aaccaccagt ccgcgaacac ttttcttcag
      301 cttgcccata tcagcctgct cttttttggt aattgcgcgc tgaaacggca tcttcatcag
      361 cttctgtgct tctttactca gtttttggct atgaacctca cgcaggcgag caatttctgc
      421 ttccagcgtg gctttctctt tttccagctc ggcatatttg tctgcggctt caaccagcga
      481 cagatcggcc tgctggtggc ggatggcgtc caggcgatcg ctgagacgtt tgatttcgtt
      541 tttttcgact tctttcatgt gatggcttct gataaagata aatttatagc ccctagtatg
      601 cgcgaccagg tgctttgttc acaactgatg acattgtaat agttctgcaa cgtaatcatt
      661 aacatgctca aaaactacgc aattcgttga ttaattaaga aatctataga aaaaagataa
      721 taaacagcag cggatgatta ttgaggattc agcacgtttt ccttaatgtc atctttaccg
      781 ggaacctaaa ctaaaattgg tggccgcgca ttcccggcgc ggggtaatac ggagatatca
      841 tcatgggaaa attaggtgaa aacgttccgc ttcttatcga taaagccgta gatttcatgg
      901 catcaagcca ggcgttccgg gagtatctga aaaaacttcc tccccgtaac gcgattccgt
      961 ccggaatacc cgatgaaagc gtgccgttat atctacaacg tctggagtat tatcgtcggc
     1021 tttatcggcc gaagcaggta gaggggcagt aagcagacgt tgcttacttt tgaaaggctt
     1081 tttttaagct gattttggaa atcagctcag tcagtgaaag gaccattgtt gatcgcacag
     1141 cctgttgata gcgctgaatt tgcattgcat acaaactgga gtctgctggt tcaaactgtg
     1201 gcggcggtgg taacgccgcc acgcagtgca gttcaccaaa gggtccaagg atttcgtcgt
     1261 cggtaaaggc gtactcgttg ccgtcgtgat ttagctcttc acgcaatgcc atcagcagtt
     1321 ccgcatcttc gtattcctgg cggttaatga cgcccaaccc gtaaatgagt tttaaacgca
     1381 cagaaagatc gcccagcgga ccgtcgccgt cgagtaacgg ttctacagca tacttcaccg
     1441 cgtaatcgtc tttgcggaat acctgaagca ccagaagatt taccgcctcg gtcaaaagct
     1501 cgacggcggt gatcagaaag cttcgcacgg ttttgccagc attcagacgc tcaagcacac
     1561 ggttttcaaa ggcctgggtt tgttccattg ttgcctgcat atctgacaat ctgttattcg
     1621 ggcgcagggt gtcctgcgcc tggtccacca ttattgcatt gctttataag cggttaccgc
     1681 ctcggataca acctcactgt tggcatcaag accggaaatc tgtgccagcg ccgcctgcgg
     1741 acctttgtca gcgatcagtg ctgccagttc ctgagcctgc ggatcatctt cactgcggaa
     1801 gtgcattgca ccagcaattc cctgaatcag attcttgtgc ggaaggctgt attccagcgt
     1861 accgagcagt ggcttgatca gacggtcgcc agcactcagt ttacgcagcg gctgacggcc
     1921 tacgcgctct acatcatctt tcagatacgg gttctcaaaa cgaccgagga ttttctggat
     1981 gtacgccgca tgtttgtctg cgtcaaagcc gtagcgcttg atcagtaccg caccactttc
     2041 ttccatcgca ccttttacca ccgcgcggat tttctcgtcg agaatagcgt cacgaatggt
     2101 ctgatgaccg gccagttttc cgaggtacgc ggttatagca tgacccgtgt tcagggtgaa
     2161 gagtttacgt tcgacaaatg ccatcaggtt gtcggttaac tccatgcttg ggatgttcgg
     2221 cagtgcgcct ttgaactgcg ttttatcgac aatccattcg ctgaaagttt ctaccgtcac
     2281 ttccagcgga tcgttagttg ccgaagccga aggcggtacg atgcggtcaa cggcggaatc
     2341 gacaaagcca acgtgttctt ctacccacgc tttggcgtct tccggcaggg cgttcatcac
     2401 atggcctttc agctgcgtgg taccgcgtac catgttttca caggcgatga tgttcagcgg
     2461 ggattcatta ccttgttctt tgcgtttcac cagccctttg gcgatagccg gagcaatacg
     2521 ttccagcaca accgggccaa cggcggtagt gactaaatcg acctgagcaa tcagatcaac
     2581 gacatcatca ccaatgctgc tgacagcatt gacgccggaa acggtatcta cctgctcggt
     2641 ttcaccaacc acatgaacct gatagctatg acgggcattc agggcatcaa gtaccacctg
     2701 attgacatcg gcaaacgtca gttggatacc cgcgtctgcc agcagtttac cgataaagcc
     2761 acgaccgata ttacctgcgc caaaatgtaa tgctttcata gtattaacct tcatcaatgt
     2821 ttttacccga gagggctggg gtgaggcttt tccctcaccc aaaccctctc cgtgaggaga
     2881 ggggcagcgc cggatgcggc gtaagcgcct tatccggcct acaagaacgt gcaaattcaa
     2941 caaatcgtga tgcatcctgt aggcctgata agcgtagcgc atcaggcaat taaccccacc
     3001 ttctccatgt ggagagggtg ggattggatt acttacgacc tgccaacagt tccagcactt
     3061 catccacgct ggtggtgtgt gccagacgct cgatgacgga ctcatcatcc agtgcattgg
     3121 tcaggctggt gataacctga atgtgctcgt tgttacgggc tgcaatacca atcaccagac
     3181 gggcaatgtc atcttcctct tcaccgaagc gcacgccttc cgggtactgg cagaacacca
     3241 cgcccgtttt cagtacgcga tctttcgctt caaccgtacc gtgtggcacc gcgatagact
     3301 cacccagata agtcggggtc agtttttcac gatccagcat cgcctgaacg tattccggct
     3361 caacgtaacc gcctttcacc agctgctcgc cagcaaaacg aatcgcttct tctttggttg
     3421 ctgctttgcg accgaggaag atgttctccg cgcccagttt gaacaggtta gcactggaat
     3481 cgtcaaagct gtctttcaga ctgtctttca ctttcacttc gttttcagta tggcgctggg
     3541 cagcaaccag acgttcggtt aggctggtgt acaggccgct gtcgaggaag ttggtcagcg
     3601 aaatatgctg tgcctgcgga acctggcgca tagcgcgttc ggtcaggtca cggtgagtga
     3661 tgacgaggtc cacatctggc ggcaggttgt tgatcgcgct gttagtgacc gaaatctgcg
     3721 acagacctgc atcctgaatt ttcttacgca gcacgcctgc gcccatcgca cttgaaccca
     3781 taccggcgtc acaggcaacg atgattttac gtacgtggct caggtcgtta gtcacatcgc
     3841 ccgcagacag cggagatgtg cctttagact cagctttcat gtcctgcata cgacgagttg
     3901 ctgcttcaat atcatcttct tctttcactt tgctggtttt cagcaaaata gcagagacaa
     3961 cgaaggagac agccatcgcc gcacacacac ccgcgatgtt agcgaaataa gcaccttttg
     4021 gtgtcatcgc cagtacagca aggatagaac ccggagatgc cggagaaacc agaccaccgc
     4081 ccaggatagt cagcgtgaac acgccagtca taccgccgag gatgactgcg aggatcagac
     4141 gcggattcat cagcacatac gggaagtaga tttcgtggat accacccagg aagtggatga
     4201 ttgccgcacc gcccgcagac tgtttagcgc taccacgacc aaagaacatg tacgccagca
     4261 gcacgcccat acctggacct gggttagctt caatcaggaa gaagattgat ttacccagtt
     4321 catgggactg ctgaataccc agcggcgaga agataccgtg gttaatggcg ttgttgagga
     4381 acaggatttt cgccggttca acaaagatag acgccagcgg cagcatgtca tggacaacca
     4441 tgaagttaac gcccgcagcc agcattttgg acagggcttc aacaatcggg ccaatgccga
     4501 ggaatgccag aatagcgagg atcatcccga tgatgcctgc ggagaagtta ttcaccagca
     4561 tctcaaaacc ggatttgatc ttaccgtcta cccagcggtc gaagtgctta atgcaccagc
     4621 cgcccagcgg acctgcaatc atagaaccga ggaacatcgg catgtctgcg ccgacgataa
     4681 cgcccatggt ggtgatggca ccgactacgc cgccacgttc gccgcctacc agcttaccac
     4741 cggtataacc gatcagcagc ggcaggagat aagtgatcat cggcccgacc agcttcgcca
     4801 gcgtctcgtt cggtaaccac cctgttggaa taaataacgc ggtgatgata ccccacgcga
     4861 taaacgcgcc gatatttggc atcaccatgt tgctgaggaa acgaccaaag ctttgcactt
     4921 tgatcttaat atcggatgac ataaaaacac cccttcttat gtttgctgtc gcgcaggctg
     4981 gaagcccgag gttttttgtt aatgtggcgg cagaggtagc cggaccttgt agatactgcg
     5041 aaatctggca ctgaatcggt taactgtcca gtcgacggcc ttttgtgtga tattaatcac
     5101 ataaatatag ggggtagaga ggtaattgac gtgacgttca tcacaaaacg cttgtgtaaa
     5161 aaagcaacaa ggcggcgatt ttcgctaaaa atggcattta aatgtgagta gtgtcacatt
     5221 tttgttttga tggtttgttg aatctttgtg atctgaatca caagatattt tcttacggcg
     5281 ttcacctgat gtgatctaca gcatgttatg ccttcgtcat acaatcgtta tgtaactaag
     5341 caactcatca cctctaaaaa ttattctttg gtgttatggc gagaatcgcg aacccggatt
     5401 attgtcaaaa tatcagcctg actcccttct ggctgccagc ccaaaaacaa cactgataaa
     5461 cgtgaatccg aggcagatat gtttctaaac tatttcgcgt tgggagtgct gatcttcgtc
     5521 tttctggtga ttttttatgg aatcatcgcg atacatgaca tcccttatct gattgccaaa
     5581 aagcgcaatc acccccatgc cgacgctatt catacggcgg gctgggtgag cctgtttact
     5641 ctgcatgtta tctggccgtt tctgtggatc tgggcgacgc tctatcaacc ggagcgtggc
     5701 tggggtatgc agtcacatgt tgcgtcgcag gagaaagcga ctgacccgga aatcgcctca
     5761 ctttctgacc gaatttcccg gctggagcat caactcgccg ccgagaaaaa gactgactat
     5821 tccacgttcc cggagatcta attatggatc tattgattgt tttaacttac gtggcgctgg
     5881 cgtgggcggt ctttaaaatc ttccgcattc cggtaaatca gtggacgctg gcgacggcgg
     5941 cgctgggagg cgtgtttctg gtgagtggtt tgattttgtt gatgaactac aaccaccctt
     6001 acacttttac cgcgcaaaag gcagtgatag cgatccctat cacgccacag gtgacgggaa
     6061 ttgttactga agtcactgac aagaataatc agcttattca aaagggcgag gtgcttttta
     6121 agctcgaccc ggttcgttac caggcgcgag ttgacagact tcaggctgac ctgatgacgg
     6181 cgacgcataa tataaagacg ctgcgtgcgc agctcactga agcgcaggcc aacaccaccc
     6241 aggtttcagc ggagcgcgac cgtctgttta aaaattatca acgttacttg aaaggcagcc
     6301 aggcggcggt gaatccgttc tcggaacgtg acatcgacga tgcgcggcaa aatttcctcg
     6361 cgcaggatgc gctggtgaaa ggctcggtgg cggagcaggc gcagatccag agccagctcg
     6421 acagtatggt taacggcgag caatcgcaga ttgtgagctt aagagcgcaa cttactgaag
     6481 caaaatataa ccttgagcag actgtcattc gcgcgccgag caatggctac gttactcagg
     6541 tactgatccg cccaggtaca tacgcagctg ccttgccgct gcgtccggtg atggtcttca
     6601 tccccgagca aaaacggcaa attgtcgccc aatttcggca aaactcgctg ttacgtctga
     6661 aacccggcga tgatgcggaa gtggtgttta acgcgctacc taggcaggtg tttcacggca
     6721 aactgactag tattttacct gtcgtgccag gcggttctta tcaggcgcag gggggattgc
     6781 aatcattaac ggtcgtgccc ggcacggacg gtgtgctggg aaccattgaa ctggacccta
     6841 acgatgatat cgatgcctta ctcgacggca tctacgccca ggtggcggtt tactccgacc
     6901 atttcagcca tgtttcggtg atgcggaaag tgctgctaag aatgaccagc tggatgcatt
     6961 atctttattt ggatcattga gggggagggg ggagattatg gaactttgct ccttgtaagg
     7021 actaattatt tttgcatatt acttcattag ctgcgatgat ttttctttaa tattcattat
     7081 gttaataagt tctggatgag tgtgctctca ttggattttt tatccgtctt gttctgccgc
     7141 aggatgagac tatacatcgt cgagatcgca atgatgatat gagttgttcc tcctgcgacg
     7201 gctctaatca aaaaagagca ggagtgcttt tccatctatt gcgatgatgg ctttattatc
     7261 tgaaggatga cagtcacatt taaaaaatat ttaatctata gatcacaatg tagggtcatg
     7321 gaatatatgt atacaactat tttcttcttc acttttaatt atcgtattca ttataaaact
     7381 aagttaaaaa aactcctgga gagtgagtta ctaatatatt tttaaataaa attaagttat
     7441 cattca
//
LOCUS       DADMHC010000188         7444 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.191, whole genome shotgun sequence.
ACCESSION   DADMHC010000188 DADMHC010000000
VERSION     DADMHC010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7444)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7444)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7444
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.191"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            7..150
                     /locus_tag="JNZ57_003378"
     CDS             7..150
                     /locus_tag="JNZ57_003378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012421661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HAY8829475.1"
                     /translation="MIMAYSVIGLISALKMPEVKDRDLSALEDAAEDQQRVVRAAQPS
                     RSL"
     gene            239..1699
                     /locus_tag="JNZ57_003379"
     CDS             239..1699
                     /locus_tag="JNZ57_003379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HAY8829476.1"
                     /translation="MGNNLLSAKATLPVYDRNNLAPRIVHLGFGAFHRAHQGVYADIL
                     ATEHFSDWGYYEVNLIGGEQQIADLQQQDNLYTVAEMSADAWTARVVGVVKKALHVQM
                     DGLETVLAAMCEPQIAIVSLTITEKGYFHSPATGQLMLDHPMVAADVQNPHQPKTATG
                     VIVEALARRKAAGLPAFTVMSCDNMPENGHVMRDVVTSYAKAVDVKLAQWIEDNVTFP
                     STMVDRIVPAVTEDTLAKIEQLTGVRDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAE
                     LVSDVLPYEEMKLRMLNGSHSFLAYLGYLAGYQHINDCMEDEHYRYAAYGLMLQEQAP
                     TLKVQGVDLQDYANRLIERYSNPALRHRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKF
                     DLLALGVAGWMRYVGGVDEQGNPIEISDPLLPVIQKAVQSSAEGKARVQSLLAIKAIF
                     GDDLPDNSLFTAKVTEAYLSLLAHGAKATVAKYSVK"
     gene            complement(1735..1938)
                     /gene="ydfZ"
                     /locus_tag="JNZ57_003380"
     CDS             complement(1735..1938)
                     /gene="ydfZ"
                     /locus_tag="JNZ57_003380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative selenium delivery protein YdfZ"
                     /protein_id="HAY8829477.1"
                     /translation="MTTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRG
                     KTVVVEGCEEKLAPLDLIRLGMN"
     gene            complement(2116..2802)
                     /locus_tag="JNZ57_003381"
     CDS             complement(2116..2802)
                     /locus_tag="JNZ57_003381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HAY8829478.1"
                     /translation="MTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVR
                     FNVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAA
                     SMITESQCYQLEQNLHQQRIAIERKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLK
                     ATVDRVHYMSFDHVSPPEMLLRQHLDIFSALQKRDGDAVERAMTQHLQEISESVRQIR
                     QENSDWFSEE"
     gene            complement(2891..3637)
                     /gene="ydfG"
                     /locus_tag="JNZ57_003382"
     CDS             complement(2891..3637)
                     /gene="ydfG"
                     /locus_tag="JNZ57_003382"
                     /EC_number="1.1.1.298"
                     /EC_number="1.1.1.381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional NADP-dependent 3-hydroxy acid
                     dehydrogenase/3-hydroxypropionate dehydrogenase YdfG"
                     /protein_id="HAY8829479.1"
                     /translation="MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL
                     GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETM
                     IDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN
                     LRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWW
                     VSTLPAHVNINTLEMMPVTQSYAGLNVHRQ"
     gene            3774..5819
                     /gene="dcp"
                     /locus_tag="JNZ57_003383"
     CDS             3774..5819
                     /gene="dcp"
                     /locus_tag="JNZ57_003383"
                     /EC_number="3.4.15.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707439.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-dipeptidase Dcp"
                     /protein_id="HAY8829480.1"
                     /translation="MTTMNPFLVQSTLPYLAPHFDQIANHHYRPAFDEGMQQKRAEIA
                     AIALNPQTPDFNNTILALEQSGELLTRVTSVFFAMTAAHTNDELQRLDEQFSAELAEL
                     ANDIYLNGELFARVDAVWQRRESLGLDSESIRLVEVIHQRFVLAGAKLAQADKAKLKV
                     LNTEAATLTSQFNQRLLAANKSGGLVVNDIAQLAGMSEQEIALAAEAAREKGLDNKWL
                     IPLLNTTQQPALAEMRDRATREKLFIAGWTRAEKNDANDTRAIIQRLVEIRAQQAKLL
                     DFPHYAAWKIADQMAKTPEAALNFMREIVPAARQRASDELASIQAVIDKQQGGFSAQP
                     WDWAFYAEQVRREKFDLDEAQLKPYFELNTVLNEGVFWTANQLFGIKFVERFDIPVYH
                     PDVRVWEIFDHNGVGLALFYGDFFARDSKSGGAWMGNFVEQSTLNETHPVIYNVCNYQ
                     KPAAGEPALLLWDDVITLFHEFGHTLHGLFARQRYATLSGTNTPRDFVEFPSQINEHW
                     ATHPQVFARYARHYQSGAAMPDELQQKMRNASLFNKGYEMSELLSAALLDMRWHCLEE
                     NEAMQDVDDFELRALVAENMDLPAIPPRYRSSYFAHIFGGGYAAGYYAYLWTQMLADD
                     GYQWFVEQGGLTRENGQRFREAILSRGNSEDLERLYRQWRGKAPQIMPMLQHRGLNI"
     gene            complement(5864..6382)
                     /locus_tag="JNZ57_003384"
     CDS             complement(5864..6382)
                     /locus_tag="JNZ57_003384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-tetronate isomerase"
                     /protein_id="HAY8829481.1"
                     /translation="MNINKDKIVQLADTDTIENLTSALSQRLIADQLRLTTAESCTGG
                     KLASALCAAEDTPKFYGAGFVTFTDQAKMKILSVSQQSLERYSAVSEKVAAEMATGAI
                     ERADADVSIAITGYGGLEGGEDGTPAGTVWFAWHIKGQTYTAVMHFAGDCETVLALAV
                     RFALVQLLQLLL"
     gene            6658..7050
                     /gene="ydeI"
                     /locus_tag="JNZ57_003385"
     CDS             6658..7050
                     /gene="ydeI"
                     /locus_tag="JNZ57_003385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI family stress tolerance OB fold protein"
                     /protein_id="HAY8829482.1"
                     /translation="MKFQAIVLASFLVMPYALADDQGGLKQDAAPPPPHAIEDGYRGT
                     DDAKKMTVDFAKNMHDGASVSLRGNLISHKGEDRYVFRDKSGEINVVIPAAVFDGREV
                     QPDQMINISGSLDKKSAPAVVRVTHLQK"
BASE COUNT         1917 a         1712 c         1863 g         1952 t
ORIGIN      
        1 gccattatga tcatggcata ttcagtgatt ggtttaatct ctgcgctgaa aatgccagag
       61 gtgaaagacc gtgatttaag tgcgctggaa gacgctgcgg aagatcaaca gcgtgttgta
      121 agagctgcgc aaccttccag aagtctgtaa accctcaatc ccttctctta ccggagaggg
      181 gatttttatt catataacaa aacatatagc ttgccatatt taaatttaag gaattgttat
      241 gggaaataat ttgttatcag caaaagcgac actccctgtt tatgatcgta ataacctggc
      301 cccaagaatt gttcatttag gctttggtgc atttcaccgt gcgcatcagg gcgtgtatgc
      361 cgatattctt gctacagaac atttcagtga ctggggatat tatgaggtca acttaatcgg
      421 cggcgaacag caaattgccg atttacaaca gcaagataat ctttataccg ttgcggaaat
      481 gtcggccgat gcgtggacgg ctcgcgtcgt tggcgtcgtt aaaaaagcct tgcacgtaca
      541 gatggatggc ttagaaaccg tgttggctgc gatgtgtgaa ccgcaaatcg cgattgtctc
      601 tctgacaatc accgaaaaag ggtatttcca ctctccggcg accggacagt taatgctcga
      661 tcacccgatg gtcgctgccg acgtgcaaaa tccccaccag ccgaaaacag caacaggggt
      721 gattgttgag gcgctggccc gccgtaaagc ggcaggactt cccgcattta ccgtcatgtc
      781 atgtgacaac atgccagaaa acggtcatgt tatgcgtgac gttgtcactt catacgcgaa
      841 agctgttgat gtaaaactgg cacaatggat cgaagataac gtgactttcc catcaacaat
      901 ggtggaccgt attgtgcccg cagtgacaga ggatacgctg gcgaaaatcg aacaacttac
      961 cggtgtgcgc gatcctgcgg gcgttgcctg tgaacctttc cgccagtggg taatagaaga
     1021 taactttgtt gccggacgtc cagaatggga aaaagcggga gccgaactgg ttagtgatgt
     1081 gctgccttat gaagagatga agttgcgcat gctcaacggc agtcattcat tcctggcgta
     1141 tttgggttat cttgccggat atcagcacat taatgactgc atggaagatg aacattatcg
     1201 ttatgcggcg tatggcttga tgttgcagga acaagcgccg acgctgaaag tgcagggcgt
     1261 tgatttgcaa gattacgcta accgattaat tgaacgctat agcaatccgg cgttacgtca
     1321 tcgaacctgg cagattgcga tggatggtag ccagaaattg ccacagcgga tgttggattc
     1381 tgttcgctgg catctggcgc atgacagcaa gttcgatctg ctggcgctgg gcgtcgcggg
     1441 ttggatgcgt tatgtcggtg gtgttgatga acagggaaat ccgatagaaa tcagtgaccc
     1501 actgttacct gttattcaga aggctgtaca aagtagtgcc gaagggaaag cgcgcgtcca
     1561 gtcattgctg gcgattaagg caatctttgg tgatgatttg ccagacaata gcttgtttac
     1621 tgcaaaagtg acggaagcgt acttgtcttt attagcgcat ggcgcgaaag cgaccgtggc
     1681 gaaatattcc gtgaagtaaa aaaagcaatg ccgccatcgg cggcattcac acacttagtt
     1741 catgccgaga cgaatcaggt ccagaggtgc cagtttctct tcacaacctt caacaactac
     1801 ggtttttccg cggcggattt gctcagcggt cagaccttca gtatcaatcg acaggatctt
     1861 gccagtgtga ccggtgccgc taaccataac acggctgcca gtggtgattg cgttacggtt
     1921 acgatcgtag gtcgtcatag gtgttttctc ctttctgatt tacagtcgaa gcccacgtaa
     1981 cgggcgcaat ataaatactc ctgtcgagtg aaatattttt tgtttttgat caagctcaca
     2041 tcttttttga tgcatgcatg agccgtaagg cggggggaaa agcctctcat cccggatggg
     2101 atgagagtaa atgaattact cttcgctaaa ccagtcgctg ttttcctggc ggatctggcg
     2161 cacggattcg ctgatttcct gcaaatgttg cgtcattgca cgttctaccg catcgccatc
     2221 acgtttttgc agggcagaga aaatatcaag atgctggcgt aacagcattt ctggtggaga
     2281 aacatggtcg aaactcatat agtgcacgcg atcaacggtc gctttcaggt tctcaatggt
     2341 atcccacgcc agttgacagt cggcaatctg cgtcaggagt tgatggaagt tgtcatcaag
     2401 ttcaaaaaaa tcatccagtt gcttgcgctc aatggcaatg cgttgctggt gaagattttg
     2461 ttccagttgg tagcactggc tttcggtaat catgctcgcc gcccgacgcg ccaccgcgca
     2521 ctcaatggcc tgacggataa aactgccgtt gcgcacctgg gccatggaaa ttttgttgac
     2581 gtagctgcca cgctgtggac gaatttgaat caggccgttt tccgccagtt taataaaggc
     2641 ttcacgaacc ggctggcgtg acacattgaa acgaacagaa acttcttttt ccgacaacgg
     2701 tgtgcctgga gcaatcaggc aatggacaat gtcgcgacga aggatacgat aaatttgctg
     2761 attgacaggc tgtgtgggat taagttgcgt ttcgacggtc attcgttctt gcttgtgagt
     2821 gagttaactg catgagtcta ccactttttt gtgacaagca ataacccggc agttacgccg
     2881 ggtataaaaa ttactgacgg tggacattca gtccggcata gctttgggta accggcatca
     2941 tttccagggt attgatattg acgtgagcag gcagcgttga cacccaccaa acggcttcgc
     3001 tgacatcttc tggcgtcaat gcaacggtat tttgataggt tttttccgct ttaccgtcat
     3061 cgcctttaaa gcggacattg gaaaactcgg tgccacccac cagacccggt tcgatgtcgg
     3121 tgacgcgcac cgccgtacca tgcaggtccg tacgcagatt caggctaaac tgacgaacaa
     3181 acgctttcgt cgcaccgtaa acgttaccac cggcataagg ccagctacct gccgttgagc
     3241 caatgttaat aatatgacca tgattacgtt caaccatacc cggtaagacg gcgcgcgtca
     3301 tatataccag gcctttgttg ttggtatcaa tcatcgtttc ccagtcttca acgctggctt
     3361 tatgcgcagg ctccatgccc aacgccaggc cggcattatt taccaggata tcaatattgc
     3421 accactcggc aggaagcgat gccagcatct cttcaatagc ggcgcggttg cgaacgtcca
     3481 gttgggcgat gtacagatta tctcccagtt cgtcttttaa ctcctgcaac cgttcctggc
     3541 gacggccagt ggcgataact ttatgccctt gttgaataaa acgacgagta atgcattcac
     3601 caaaacctgc cgttgctcca gttactaaaa cgatcatctc actgttcctc aacgcttttg
     3661 tgtgtcaata acatagcacg tgatgcttaa gagcgggtaa tactggtttg taagattgca
     3721 ctccgttatc agtaagccta cgctatggaa cacctcgcgt tcaggagaag aaaatgacaa
     3781 caatgaatcc tttccttgtg caaagcacac taccgtatct ggctccccat tttgatcaaa
     3841 ttgccaatca tcactatcgt ccggcattcg atgagggaat gcagcaaaag cgggcagaaa
     3901 ttgctgccat cgcgcttaac ccgcaaacgc ctgatttcaa caatactatt ctggcactgg
     3961 aacaaagcgg agaattactt acccgcgtta ccagcgtctt ttttgcgatg actgcggcgc
     4021 ataccaatga tgaattacag cgtcttgatg aacagttttc cgctgaactg gcggaactgg
     4081 ctaatgatat ctatctgaac ggtgaattat tcgcgcgggt agatgctgtc tggcagcgcc
     4141 gtgaatccct ggggcttgat agtgaatcca tccgcctggt ggaggtgatt catcaacgtt
     4201 ttgtccttgc cggagccaaa cttgcgcaag ctgataaagc aaaattaaaa gtactgaata
     4261 cagaagctgc gaccctgacc agccagttta accagcgatt actggcagca aataaatccg
     4321 gcggtctggt tgtgaacgat atcgcgcagc tggcaggaat gagtgagcaa gagattgcgc
     4381 tggcggcaga ggcggctcgc gagaaaggtc tggataacaa atggctgatt ccgctgctga
     4441 ataccaccca acaaccggcg cttgccgaga tgcgcgatcg tgcgacgcgt gaaaaactgt
     4501 ttattgcggg ctggacgcga gcggaaaaaa atgatgccaa tgatacccgc gctatcattc
     4561 aacgtctggt agagattcgc gcacagcagg cgaaactgct tgattttcct cattatgccg
     4621 catggaaaat cgccgatcag atggcaaaaa cgccagaagc agcactcaac tttatgcggg
     4681 aaattgttcc agcggcgcgt caacgtgcta gcgatgaatt agcctccata caggcggtta
     4741 tcgataagca gcaaggcggg tttagcgcgc agccgtggga ctgggcattt tatgccgaac
     4801 aggtacggcg ggagaaattt gatcttgatg aggcgcagct caagccatat tttgaattaa
     4861 acacggtgtt gaatgaaggt gtattctgga ccgcgaatca gctcttcggt attaagtttg
     4921 tcgaacgttt tgatattcct gtctaccatc ctgacgttcg tgtgtgggaa atttttgatc
     4981 ataatggcgt gggactggcg ttattttacg gtgatttctt cgcccgtgat tcaaaaagcg
     5041 gcggtgcatg gatgggcaat tttgttgagc aatcaacgct taatgaaacg catccggtaa
     5101 tttataacgt ttgcaattat cagaaacccg ctgccggtga gcctgcgttg ttactctggg
     5161 atgatgtcat aaccttattc catgaatttg gtcatacgct gcacggcctt tttgcccgcc
     5221 agcgttatgc cacgctttcc ggcaccaaca cgccgcgtga ttttgtcgaa tttccgtcgc
     5281 aaatcaacga acactgggca acgcatccgc aggtattcgc tcgctacgcc cggcattatc
     5341 agagcggggc agcaatgcct gacgaactgc aacagaaaat gcgtaatgcc agcctgttca
     5401 acaaagggta tgagatgagc gaactgctta gcgccgcact tctcgatatg cgctggcatt
     5461 gcctggaaga aaacgaagca atgcaggatg tcgatgattt tgaattgcgg gcgctggtgg
     5521 cggaaaatat ggatcttcct gctataccgc cacgctatcg cagcagttat ttcgcccata
     5581 tttttggtgg cggatatgct gcaggttatt acgcttatct gtggacgcaa atgttggccg
     5641 atgatggtta ccagtggttt gttgagcagg gcggattaac gcgtgaaaat gggcagcgtt
     5701 ttcgcgaggc gatcctttcc agaggtaaca gcgaagatct ggaacgcctg tatcgacaat
     5761 ggcgcggtaa ggctcctcag attatgccga tgctgcaaca tcgtggcttg aatatataaa
     5821 caccaccaat ggctggcctg gagatatcgc caggccagcc tggttatagc agtaattgca
     5881 gcagctggac gagggcaaac ctcaccgcta aagctaatac cgtttcgcag tcgccagcaa
     5941 aatgcataac cgcagtgtag gtctggcctt taatatgcca cgcgaaccag acggtacccg
     6001 ctggcgtacc atcttcaccg ccctccagtc cgccgtagcc ggtaatggca atactgacat
     6061 cagcatccgc acgctctatg gcacctgttg ccatttctgc tgccactttc tcactcaccg
     6121 cagaatatcg ttcaagagat tgctggctta cgctgaggat tttcatcttt gcctgatcgg
     6181 tgaaagtaac aaagcctgca ccgtaaaatt tgggtgtatc ttcagctgca cacagggcgc
     6241 tagccaactt accgccggtg catgattcgg cggtagttaa gcgtaattga tccgcgataa
     6301 gtctttgact caacgcggat gtcaggtttt caatagtgtc ggtatctgcg agttgtacaa
     6361 ttttatcttt attaatgttc actgtttttt gtccacgcta ttatatgtaa aggtgatttg
     6421 ctttttctgt atgctcgtcc aatataataa ttttcaaaca tataaatccg attattctga
     6481 aaatatgttt aagactcttc aatcttctta actttagtga gttaaattct ctgaatattt
     6541 gacagctagt gggctgattt taaatgcctt ataacaattg gcagtattct tatttggcaa
     6601 ttataaaaat agcaaccaga cttaataagt caaaccaaac gcaattaagg agttagtatg
     6661 aaatttcagg ccattgtatt agcaagtttt cttgtcatgc cttatgcgtt ggcagatgac
     6721 cagggcggtt taaaacagga tgcagcgcca ccgccgcctc atgcaataga agatggctat
     6781 cgcggaaccg atgatgcaaa aaaaatgacc gttgatttcg caaaaaacat gcacgatggc
     6841 gcttcggttt cactacgcgg taatttgatt tctcacaaag gagaggaccg ttacgttttt
     6901 cgcgataaga gcggtgaaat taatgtcgtt attcctgcgg ccgtctttga tggacgagaa
     6961 gttcagccgg accagatgat caacattagc ggtagtctgg ataagaaaag cgcgccggcc
     7021 gtcgttcggg tcactcattt gcagaaataa aaataaatta gcctgatggc ctgaactact
     7081 gggccattag ggtattgggt tatgctattt gtcatccttt tatttacgat aatgcagagg
     7141 tgatttacag aattaaacac ttttttatcc gctgattttg ttttaaatca caatgttatc
     7201 tcagagatga ctcataactt cggatttcta tgaaaatatt gacgtaattt tgcttttctc
     7261 tcgttagaat agcgcgcaca aggaactgtg aaaaaggagt ggcaatgatc aagaagacaa
     7321 cggaaattga tgccatcttg ttaaatctca ataaggctat cgatgcccac taccagtggc
     7381 tggtgagtat gtttcacagc gtggtcgcga gagatgccag taagccagaa ataacggata
     7441 acca
//
LOCUS       DADMHC010000189         7437 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.192, whole genome shotgun sequence.
ACCESSION   DADMHC010000189 DADMHC010000000
VERSION     DADMHC010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7437)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7437)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7437
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.192"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            157..765
                     /locus_tag="JNZ57_003386"
     CDS             157..765
                     /locus_tag="JNZ57_003386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HAY8829483.1"
                     /translation="MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFN
                     PLGKVPVLVTEEGECWFDSPIIAEYIELMNVAPAMLPRDPLESLRVRKIEALADGIMD
                     AGLVSVREQARPAAQQSEDELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIAC
                     AVGYLNFRRVAPGWCVDRPHLVKLVENLFSRESFARTEPPKA"
     gene            863..2254
                     /gene="selA"
                     /locus_tag="JNZ57_003387"
     CDS             863..2254
                     /gene="selA"
                     /locus_tag="JNZ57_003387"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HAY8829484.1"
                     /translation="MTTETRSLYSQLPAIDRLLRDSSFLSLRDTYGHTRVVELLRQML
                     DEAREVIRDSQTLPAWCENWAQEVDARLTKEAQSALRPVINLTGTVLHTNLGRALQAE
                     AAVEAVAQAMRSPVTLEYDLDDAGRGHRDRALAQLLCRITGAEDACIVNNNAAAVLLM
                     LAATASGKEVVVSRGELVEIGGAFRIPDVMRQAGCTLHEVGTTNRTHANDYRQAVNEN
                     TALLMKVHTSNYSIQGFTKAIDEAELVALGKELDVPVVTDLGSGSLVDLSQYGLPKEP
                     MPQELIAAGVSLVSFSGDKLLGGPQAGIIVGKKEMIARLQSHPLKRALRADKMTLAAL
                     EATLRLYLHPEALSEKLPTLRLLTRSAEVIQIQAQRLQAPLAAHYGAEFAVQVMPCLS
                     QIGSGSLPVDRLPSAALTFTPHDGRGSHLESLAARWRELPVPVIGRIYDGRLWLDLRC
                     LEDEQRFLEMLLK"
     gene            2251..4095
                     /gene="selB"
                     /locus_tag="JNZ57_003388"
     CDS             2251..4095
                     /gene="selB"
                     /locus_tag="JNZ57_003388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HAY8829485.1"
                     /translation="MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAY
                     WPQPDGRVPGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLT
                     GNPMLTVALTKADRVDEARVDEVERQVKDVLREYGFAEAKLFITAATEGRGIDALREH
                     LLQLPGREHASQHSFRLAIDRPFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRV
                     RALHAQNQPTETAHAGQRIALNIAGDAEKEQINRGDWLLADAPPEPFTRVIVELQTHT
                     PLTQWQPLHIHHAASHVTGRVSLLEDNLAELVFDTPLWLADNDRLVLRDISARNTLAG
                     ARVVMLNPPRRGKRKPEYLQWLASLARAQNDSEALAVHLQRGAVNLPDFAWARQLNGE
                     GMRELLQQPGYIQAGYSLLNAPVAARWQRKILDTLATYHEQHRDEPGPGRERLRRMAL
                     PMEDEALVLLLIEKMRESGDILSHHGWLHLPDHKAGFSEEQQAIWQKAEPLFGDEPWW
                     VRDLAKETGTDEQAMRLTLRQAAQQGIITAIVKDRYYRNDRIVEFANMIRDLDQECGS
                     TCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRGNDHLLRDALLFPEK"
     gene            4285..5436
                     /gene="yiaY"
                     /locus_tag="JNZ57_003389"
     CDS             4285..5436
                     /gene="yiaY"
                     /locus_tag="JNZ57_003389"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine dehydrogenase"
                     /protein_id="HAY8829486.1"
                     /translation="MASSTFFIPSVNVIGADSLTDAMNMMADYGFTRTLIVTDSMLTK
                     LGMAGDVQKALEERNIFSVIYDGTQPNPTTENVAAGLKLLKENNCDSVISLGGGSPHD
                     CAKGIALVAANGGDIRDYEGVDRSAKPQLPMIAINTTAGTASEMTRFCIITDEARHIK
                     MAIVDKHVTPLLSVNDSSLMIGMPKSLTAATGMDALTHAIEAYVSIAATPITDACALK
                     AVTMIAENLPLAVEDGSNAKAREAMAYAQFLAGMAFNNASLGYVHAMAYQLGGFYNLP
                     HGVCNAVLLPHVQVFNSKVAAARLRDCAAAMGVNVTGKNDAEGAEACINAIRELAKKV
                     DIPAGLRDLNVKEEDFAVLATNALKDACGFTNPIQATHEEIVAIYRAAM"
     gene            5601..7139
                     /locus_tag="JNZ57_003390"
     CDS             5601..7139
                     /locus_tag="JNZ57_003390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001551836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HAY8829487.1"
                     /translation="MTNNPPSAQIKPGEYGFPLKLKARYDNFIGGEWVAPADGEYYQN
                     LTPVTGQLLCEVASSGKRDIDLALDAAHKVKDKWAHTSVQDRAAILFKIADRMEQNLE
                     LLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEP
                     LGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEIVGDLLPPGV
                     VNVVNGAGGEIGEYLATSKRIAKVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNI
                     FFADVMDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIYERFMERAIRRVESI
                     RSGNPLDSVTQMGAQVSHGQLETILNYIDIGKKEGADVLTGGRRKLLEGELKDGYYLE
                     PTILFGQNNMRVFQEEIFGPVLAVTTFKTMEEALELANDTQYGLGAGVWSRNGNLAYK
                     MGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMMLEHYQQTKCLLVSYSDKP
                     LGLF"
BASE COUNT         1766 a         1849 c         2079 g         1743 t
ORIGIN      
        1 aagtgagata tccatcagag tgaaataatt aggaaaatat ttatatcacc atgataaata
       61 tgtgatttat ttggaagtaa caaaccatca acattttctg ccctttttcc catcaccagg
      121 ccatactgat atttttcctc gcacaaagga ctcggcatga aactcgtcgg tagctacacc
      181 agcccgtttg tacgcaaact ttctattctg ttgttagaaa agggcataac tttcgaattt
      241 attaatgaac tgccctataa cgcggacaac ggcgtggcgc aatttaaccc gttaggaaaa
      301 gtgccggtgc tggtgaccga agagggcgaa tgctggtttg attcgccgat catcgctgaa
      361 tatattgagt taatgaatgt cgctccggcg atgttgccgc gcgatccgct ggagtcgttg
      421 cgggtgcgca aaattgaggc gctggcggat ggcattatgg atgccgggct ggtatcggtg
      481 cgtgaacagg cgcgtccagc ggcgcagcag tctgaagatg aattgttacg ccagcgggag
      541 aaaatcaacc gcagtctgga tgtgctggaa ggatatctgg tcgatggcac actcaaaacc
      601 gatacggtca atctggcgac tatcgccatt gcctgtgctg tcggatatct caatttccgc
      661 cgcgttgcgc caggttggtg tgtcgaccgc ccacacttag tcaaactggt cgaaaacctg
      721 tttagccgcg aaagttttgc tcgcaccgaa ccgccaaagg cttgatgcgc gatatgtcct
      781 cctgacccat ctcacgttac aatccgtggt tatgttaaac gcccttctcc gtgtgagagg
      841 gccttgatta gccaggtttc ctatgacaac cgaaacgcgt tccctctata gtcaacttcc
      901 ggctattgat cgcttattgc gcgatagctc cttcctttct ttgcgtgata cttatggtca
      961 cacccgcgtg gtggaattgt tgcgtcagat gctcgacgaa gcgcgagaag tgattcgtga
     1021 cagccagacg cttcctgcgt ggtgtgaaaa ctgggcgcaa gaagtcgatg cccggttgac
     1081 gaaagaggcg cagagcgcgc tgcgtccggt gatcaacctg acgggaaccg tgctgcatac
     1141 caaccttgga cgagctttac aggcggaagc cgcggtggaa gccgttgcgc aggctatgcg
     1201 ttcgccagtg accctcgagt acgatctgga cgacgctgga cgcggacatc gcgatcgggc
     1261 gctggcgcaa ctgctgtgcc gtattacggg ggcggaagat gcctgtatcg tcaataacaa
     1321 tgcggcggcg gtgttattga tgttggcggc cactgccagc gggaaagagg tggtagtatc
     1381 tcgcggcgaa ttggtggaga ttggcggcgc gtttcgtatt cccgatgtta tgcgtcaggc
     1441 aggctgcacc ctacacgaag tagggaccac caaccgtacg cacgcgaatg attatcgtca
     1501 ggcggtgaat gaaaataccg cactgttgat gaaagtacat accagtaact acagcattca
     1561 ggggttcacc aaagcgatag atgaagcgga actggtggcg ctcggcaaag agctggatgt
     1621 tcccgtagtg actgatttag gcagtggctc gctggtcgat cttagccagt acggtttgcc
     1681 gaaagagcca atgccgcagg agttgattgc ggcgggcgtc agtctggtga gcttctccgg
     1741 cgacaagttg ttaggcgggc cgcaggcagg gattatcgtt ggtaaaaaag agatgatcgc
     1801 ccgcctgcaa agccacccgc tgaagcgtgc attacgcgcg gataaaatga ccctcgcggc
     1861 gctggaagcc acgttgcgtc tttatttaca ccctgaagct ctgagtgaaa aattaccgac
     1921 cctgcgcctg cttacccgca gcgcagaggt cattcaaatc caggcacaac gtttacaggc
     1981 tccccttgcc gcacattacg gcgcggagtt tgcggtacag gttatgccat gtctttcgca
     2041 gattggcagt ggttcgctgc cggttgatcg cctgccgagc gcggcattaa cgtttacacc
     2101 ccatgatgga cgcggtagcc accttgagtc attagccgcc cgctggcgtg aattgccagt
     2161 gccggtgatt ggtcgtattt atgacggacg attgtggctg gatttacgct gccttgaaga
     2221 tgagcaacgg tttttggaga tgttgttgaa atgattattg cgactgccgg acacgttgac
     2281 cacggcaaaa caaccttatt gcaggcgatt actggcgtaa atgctgaccg tctgccggaa
     2341 gaaaaaaagc gcggcatgac catcgatctc ggctatgcct actggccgca gccggatggt
     2401 cgcgtgcctg gttttatcga cgtacccggt catgaaaagt ttctttccaa catgctggcg
     2461 ggcgttggtg gtattgatca cgcgctgttg gtggtggcgt gcgatgacgg cgtgatggcg
     2521 cagacccgtg agcatctggc gattttgcag ctgaccggta acccgatgct gacagtggcg
     2581 ctgaccaagg ccgatcgcgt ggacgaagcg cgtgttgatg aggttgaacg ccaggtaaag
     2641 gatgtgctgc gggaatacgg ttttgctgag gcaaaactgt ttatcaccgc agcaaccgaa
     2701 ggtcggggaa ttgatgccct gcgcgagcat ctgcttcagt taccaggacg tgaacacgcc
     2761 agccaacata gtttccgcct cgcgatcgac cgcccattta ccgtaaaagg tgccgggctg
     2821 gtcgtcaccg gtacggcgtt aagcggggaa gtgaaggtag gcgattcact ctggctgact
     2881 ggtgtaaata aaccgatgcg tgtacgtgcg ctgcatgcac aaaaccagcc aacagaaacc
     2941 gcccatgccg ggcagcgtat cgcgcttaac atcgcgggtg atgcggaaaa agagcagatt
     3001 aaccgtggcg actggctgct tgccgatgcg ccgccagagc cgttcacacg ggtgattgtc
     3061 gagcttcaaa cccatacacc gctgacccag tggcagccgc tgcatattca ccacgccgcc
     3121 agccacgtca cgggacgcgt ttcactgctg gaagataacc ttgctgaact ggtcttcgac
     3181 accccgttat ggctggcaga taacgaccgc ctggtattgc gcgatatctc tgcccgcaac
     3241 acgctggccg gagcgcgcgt cgtgatgctt aacccgccgc gtcgcggtaa acgtaaacca
     3301 gagtatctgc aatggctggc ttccctcgcc agggcacaga atgatagcga agcgttagcc
     3361 gttcacctgc aacgcggcgc ggttaatctt cctgatttcg cctgggcgcg ccagctcaac
     3421 ggcgaaggga tgcgcgaact gctgcaacag cctggctata ttcaggctgg ttatagcttg
     3481 ttgaatgcgc cggttgccgc tcgctggcaa cggaaaattc tcgacacatt agcgacttat
     3541 catgagcaac atcgcgatga acctgggcct gggcgcgaac gtctgcgacg tatggcgttg
     3601 ccaatggaag atgaagcgct agtactgttg ctgattgaaa agatgcgcga aagcggcgac
     3661 atcctcagtc atcacggttg gctgcatctg ccggatcaca aagcgggctt cagcgaagag
     3721 cagcaggcca tctggcaaaa agcagagccg ctgtttggtg acgagccgtg gtgggtgcgt
     3781 gatctggcaa aagagacggg taccgacgag caggcaatgc gcctgacgct acgccaggcg
     3841 gcgcagcaag gaataattac cgcgatcgtc aaagatcgtt attaccgtaa cgatcggatt
     3901 gtcgaatttg ccaatatgat ccgcgatctc gatcaggagt gtggttcaac ctgcgcggcg
     3961 gatttccgcg atcgcttagg cgtaggccga aagctggcaa ttcagattct ggaatatttt
     4021 gaccgcattg gctttacgcg tcgtcgtgga aatgatcatt tattgcgcga cgcattatta
     4081 tttccggaaa aataaggaaa tgattaatta atttttaaaa taaattaata caaatttctt
     4141 atgattttaa aaaaagcaca ttgtttaatg aatacaatgt gctttttatt agattaattt
     4201 tgataattaa taataatgat catgttttcg aatgaaaatc ctcagtaagc ttcccaccct
     4261 tttttacact ttcaggagtg tgttatggca tcttcaactt tctttattcc ttctgtgaat
     4321 gtcatcggcg ctgattcatt gactgatgca atgaatatga tggcagatta tggatttacc
     4381 cgtaccttaa ttgtcactga cagtatgtta acgaaattag gtatggcggg cgatgtgcaa
     4441 aaagcactgg aagaacgcaa tatttttagc gttatttatg atggcaccca acctaacccc
     4501 accacggaaa acgtcgccgc aggtttgaaa ttacttaaag agaataattg cgatagcgtg
     4561 atctccttag gcggtggttc tccacacgac tgcgcaaaag gtattgcgct ggtggcagcc
     4621 aatggcggcg atattcgcga ttacgaaggc gttgaccgct ctgcaaaacc gcagctgccg
     4681 atgatcgcca tcaacaccac tgcgggtacg gcctctgaaa tgacccgttt ctgcatcatc
     4741 actgacgaag cgcgtcatat caaaatggcg attgttgata aacatgtcac tccgctgctt
     4801 tctgtcaatg actcctctct gatgattggt atgccgaagt cactgaccgc cgcaacgggt
     4861 atggatgcct taacgcacgc tatcgaagca tatgtttcta ttgccgccac gccgatcact
     4921 gacgcttgtg cactgaaagc cgtgaccatg attgccgaaa acctgccgtt agccgttgaa
     4981 gatggcagta atgcgaaagc gcgtgaagca atggcttatg cccagttcct tgccggtatg
     5041 gcgttcaata atgcttctct gggttatgtt catgcgatgg cgtaccagct gggcggtttc
     5101 tacaacctgc cacacggtgt atgtaacgcc gttctgctgc cccatgttca ggtattcaac
     5161 agcaaagtcg ccgctgcacg tctgcgtgac tgtgccgctg caatgggcgt gaacgtgaca
     5221 ggtaaaaacg acgcggaagg tgctgaagcc tgcattaacg ccatccgtga actggcgaag
     5281 aaagtggata tcccggcagg cctacgcgac ctgaacgtga aagaagaaga tttcgcggtt
     5341 ctggcgacta atgccctgaa agatgcctgt ggttttacta acccgatcca ggcaactcac
     5401 gaagaaattg tggcgattta tcgcgcagcg atgtaatcat catttccaca acggctggca
     5461 aattgtcagc cgctttttca actatctctg taacccttgc ccgtaaattc gtgatagccg
     5521 tcgtaaagct gttaccgact ggcgaagatt tcgccagtca cgtctaccct tgttatacct
     5581 cacaccgcaa ggagacgatc atgaccaata atcccccttc agcacagatt aagcccggcg
     5641 agtatggttt ccccctcaag ttaaaagccc gctatgacaa ctttattggc ggcgaatggg
     5701 tagcccctgc cgatggtgag tattaccaga acctgacgcc ggtgactggg cagctgctgt
     5761 gcgaagtggc gtcttcgggc aaacgagaca tcgatctggc gctagatgct gcgcacaaag
     5821 tgaaagataa atgggcgcac acctcggtgc aggatcgcgc ggcgattctg tttaagattg
     5881 ccgatcgaat ggaacaaaac ctcgagctgt tagcgacagc tgaaacctgg gataacggca
     5941 aacccattcg cgaaaccagt gctgccgacg tgccgctggc gattgatcat tttcgctatt
     6001 tcgcctcgtg tattcgggcg caggaaggtg ggatcagtga agttgatagc gaaaccgtgg
     6061 cctatcattt ccatgaaccg ttaggcgtgg tggggcagat tatcccgtgg aacttcccgc
     6121 tgctgatggc gagctggaaa atggctcccg cgctggcggc gggcaactgt gtggtgctga
     6181 aacccgcacg tcttaccccg ctttctgtac tgctgctaat ggaaattgtc ggtgatttac
     6241 tgccgccggg cgtggtgaac gtggtcaatg gcgcaggtgg ggaaattggc gaatatctgg
     6301 cgacctcgaa acgcatcgcc aaagtggcgt ttaccggctc aacggaagtg ggccaacaaa
     6361 ttatgcaata cgcaacgcaa aacattattc cggtgacgct ggagttgggc ggtaagtcgc
     6421 caaatatctt ctttgctgat gtgatggatg aagaagatgc ctttttcgat aaagcgctgg
     6481 aaggctttgc actgtttgcc tttaaccagg gcgaagtttg cacctgtccg agtcgtgctt
     6541 tagtgcagga atctatctac gaacgcttta tggaacgcgc catccgccgt gtcgaaagca
     6601 ttcgtagcgg taacccgctc gacagcgtga cgcaaatggg cgcgcaggtt tctcacgggc
     6661 aactggaaac catcctcaac tacattgata tcggtaaaaa agagggcgct gacgtgctca
     6721 caggcgggcg gcgcaagctg ctggaaggtg aactgaaaga cggctactac ctcgaaccga
     6781 cgattctgtt tggtcagaac aatatgcggg tgttccagga ggagattttt ggcccggtgc
     6841 tggcggtgac caccttcaaa acgatggaag aagcgctgga gctggcgaac gatacgcaat
     6901 atggcctagg cgcgggcgtc tggagccgca acggtaatct ggcctataag atggggcgcg
     6961 gcatacaggc tgggcgcgtg tggaccaact gttatcacgc ttacccggca catgcggcgt
     7021 ttggtggcta caaacaatca ggtatcggtc gcgaaaccca caagatgatg ctggagcatt
     7081 accagcaaac caagtgcctg ctggtgagct actcggataa accgttgggg ctgttctgat
     7141 ataagaagct ggtcgcattg ggtattcatt gcctgatgtg acgcttacgc gtcttatcat
     7201 gcctacggga acctgaccgt aggccggata aggcgtacac gccgcatccg gcataaacaa
     7261 agcgcacgtt gttacaattt acgttttaaa cctacgtgcg caataatcca gactacgcca
     7321 acagaagtgc gtttctgggg cgtgttttgt caggagttta atctcgcgtt tcgatggtga
     7381 gcaggcgaac taggccgtaa atcaccattg gtgatccgag gccaatcagc aataaac
//
LOCUS       DADMHC010000190         7437 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.193, whole genome shotgun sequence.
ACCESSION   DADMHC010000190 DADMHC010000000
VERSION     DADMHC010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7437)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7437)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7437
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.193"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            167..274
                     /locus_tag="JNZ57_003391"
     CDS             167..274
                     /locus_tag="JNZ57_003391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588455.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829488.1"
                     /translation="MPTKRFDKKHWKMVVVLLAICGAMLLLRWAAMIWG"
     gene            complement(327..1085)
                     /locus_tag="JNZ57_003392"
     CDS             complement(327..1085)
                     /locus_tag="JNZ57_003392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiY family protein"
                     /protein_id="HAY8829489.1"
                     /translation="MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFE
                     GNLNAGYLAQSGNTKSSSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGG
                     RSRFNLTDYDYLFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
                     DKYTDNASETQPLGYASGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHF
                     GLKVAYNVTWNSEPPESAPEHTDRRTTLSLGYSM"
     gene            1372..2301
                     /gene="pfkB"
                     /locus_tag="JNZ57_003393"
     CDS             1372..2301
                     /gene="pfkB"
                     /locus_tag="JNZ57_003393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416237.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase II"
                     /protein_id="HAY8829490.1"
                     /translation="MVRIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINV
                     ARAIAHLGGSATAIFPAGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGE
                     QYRFVMPGAALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLTQLISASQKQG
                     IRCIVDSSGEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKA
                     KRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMV
                     RFGVAAGSAATLNQGTRLCSHDDTQKIYAYLSR"
     gene            2402..2692
                     /gene="ghoS"
                     /locus_tag="JNZ57_003394"
     CDS             2402..2692
                     /gene="ghoS"
                     /locus_tag="JNZ57_003394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type V toxin-antitoxin system endoribonuclease
                     antitoxin GhoS"
                     /protein_id="HAY8829491.1"
                     /translation="MASGDLVRYVITVMLHEDTLTEINELNNYLTRDGFLLTMTDDEG
                     NIHELGTNTFGLISTQSEEEIRELVSGLTQSATGKDPEITITTWEEWNSNRK"
     gene            2798..3658
                     /locus_tag="JNZ57_003395"
     CDS             2798..3658
                     /locus_tag="JNZ57_003395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructosamine kinase family protein"
                     /protein_id="HAY8829492.1"
                     /translation="MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFV
                     KCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHS
                     AFILGQQIARLHQWSDQPQFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAA
                     EKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDR
                     ECDLAMLPLHTEQPPQIYDGYQSVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIA
                     QQSLDRLLAA"
     gene            complement(3699..4235)
                     /locus_tag="JNZ57_003396"
     CDS             complement(3699..4235)
                     /locus_tag="JNZ57_003396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829493.1"
                     /translation="MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENQE
                     GINAVMLDFTHVMIDMMQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQ
                     DSGARMSRQARFLREGVEDQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYIL
                     PVICIAAGYVFFSLLGFI"
     gene            4382..5050
                     /gene="hxpB"
                     /locus_tag="JNZ57_003397"
     CDS             4382..5050
                     /gene="hxpB"
                     /locus_tag="JNZ57_003397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HxpB"
                     /protein_id="HAY8829494.1"
                     /translation="MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRN
                     ELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVA
                     LCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAK
                     LGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK
                     DLLG"
     gene            5213..5803
                     /locus_tag="JNZ57_003398"
     CDS             5213..5803
                     /locus_tag="JNZ57_003398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707386.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HAY8829495.1"
                     /translation="MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLL
                     PDIDHPKSFLGQRLKWISKPIARAFGHRGFTHSLLAVFALLATFYLKVPEGWFIPADA
                     LQGMVLGYLSHILADMLTPAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSV
                     WMPHSLPENSAVRWSSQIINTLQIQFHRLIKHQVEY"
     gene            5936..7327
                     /locus_tag="JNZ57_003399"
     CDS             5936..7327
                     /locus_tag="JNZ57_003399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine transporter"
                     /protein_id="HAY8829496.1"
                     /translation="MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFG
                     LALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLG
                     KISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVFD
                     LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLAA
                     IDTLQSWVMKLVRLVMQLTPYGVLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFA
                     VHGILLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQTRRLGVPESIASFA
                     ASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGG
                     ATFAALIVLPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKA
                     ILDSEDDAELAHR"
BASE COUNT         1870 a         1809 c         1839 g         1919 t
ORIGIN      
        1 attttcgata tatatgttga tgcataatat tattttttca taaaacgcag aaacagtgac
       61 caggtgtaca acgccaccca acggctgtaa taacaaaaaa tcccttgatg cccgtccctt
      121 ttgttacact ccgttatcac gcacaagaga tatgcaggac actggtatgc cgactaaacg
      181 ctttgataaa aaacactgga agatggtggt ggtgctactg gcaatctgtg gcgctatgtt
      241 gttgctacgt tgggcagcaa tgatttgggg ctgagcagtg acaaacgaag acagccagac
      301 cgcataacac ggtccggcag ataattttac atgctgtagc ccagcgataa ggttgtccga
      361 cggtcggtat gttccggtgc agactctgga ggttcagagt tccatgtaac gttgtaagcc
      421 accttcagtc caaaatgttc attaatagca acatttaatg cgctttcgga gttcagcgtt
      481 gtgtcttccg cgccaaagac cgaaacaccc tgcgtaaatt tagcgttgtc agtcaactgc
      541 catgcataag ccccggaggc atagcccagc ggctgagttt cactggcatt gtcggtatat
      601 ttgtcgtaac gcacacctgg accgaattca aagcggaaac tgtgtaccgg gccattcaaa
      661 aactgacgac cataacccgc ggtcaacaca tcgcgctctc gatagccgtt ataacggtct
      721 gtcagccagc ttgcctgacc aaataaatag tcataatcag ttaaattaaa gcggctacgc
      781 ccgcccgccg catatttttc tgaagaacgc tcatcattag aagaagtatt actggcgttc
      841 ccccacagcg accaggcagt ggtttgtcca taccaggtca tggtggtgtc agccgtaagt
      901 gaggagcttt tcgtattgcc tgattgtgca agatatcctg cgttcagatt accttcgaaa
      961 ggttttttag cgctggcagg atcgtccatg acagtaaaaa cggaatcatc ggcagctgca
     1021 ttcagtgacg caaacatgcc ccccgccaac ataacgatgg caggaactgt cttcaaaagc
     1081 ttcatttatc aagagtccgt acaacaaaaa aagagaccat cgcggtcccg gaaactttct
     1141 taaggatcaa agattagcgt ccctggaaag gtaacgaatt ataaaaaggc gcgaataact
     1201 tagcaatgta ttcttatttc attttttgaa taagcatgtg gcgaaaacag atttttattt
     1261 atatatattt atctgcaaaa ttttaaataa agctccaata aatcatattg ttaatttctt
     1321 cactttccgc tgattcggtg ccagactgaa atcagcctat aggaggaaat gatggtacgt
     1381 atctatacgt tgacacttgc gccctctctc gatagcgcaa caattacccc gcaaatttat
     1441 cccgaaggaa aactgcgctg taccgcaccg gtgttcgaac ccgggggcgg cggcatcaac
     1501 gtcgcccgcg ccattgccca tcttggaggc agtgccacag cgatcttccc ggcgggtggc
     1561 gcgaccggcg aacacctggt ttcactgttg gcggatgaaa atgtccccgt cgctactgta
     1621 gaagccaaag actggacccg gcagaattta catgtacatg tggaagcaag cggtgagcag
     1681 tatcgttttg ttatgccagg cgcggcatta aatgaagatg agtttcgcca gcttgaagag
     1741 caagttctgg aaattgaatc cggggccatc ctagtcataa gcggaagcct gccgccaggt
     1801 gtgaagctgg aaaaattaac ccaactgatt tccgcttcgc aaaaacaagg gatccgctgc
     1861 atcgtcgaca gttctggcga agcgttaagt gcagcactgg caattggtaa catcgagttg
     1921 gttaagccta accaaaaaga actcagtgcg ctggtgaatc gcgaactcac ccagccggac
     1981 gatgtccgca aagccgcgca ggaaatcgtt aatagcggca aggccaaacg ggttgtcgtt
     2041 tcccttggtc cacaaggagc gctgggtgtt gatagtgaaa actgcattca ggtggtgcca
     2101 ccaccggtga aaagccagag taccgttggc gctggtgaca gcatggtcgg cgcgatgaca
     2161 ctgaaactgg cagaaaatgc ctctcttgaa gagatggtcc gttttggcgt agctgcgggg
     2221 agtgcagcca cactcaatca gggaacacgt ctgtgctccc atgacgatac gcaaaaaatt
     2281 tacgcttacc tttcccgcta acaaaaacat tcccccagca ttgggggaat caccaccaac
     2341 ctgtcggcaa cgcgtttctc cgactatgct caaaagtcat gtgataacaa aggggtgaac
     2401 tatggccagt ggcgatcttg tccgttatgt cataaccgtc atgttgcatg aggatacatt
     2461 gactgaaatt aacgagttga ataattacct gactcgcgac ggttttttgc tcaccatgac
     2521 ggatgatgag ggaaatatcc atgagctggg gactaacact tttggactta tcagtaccca
     2581 aagtgaagaa gaaattagag aactggtttc ggggcttacc caaagtgcaa ccggcaaaga
     2641 tcctgaaatc accatcacga cctgggagga atggaatagc aacagaaaat aaatggtttt
     2701 tgggcaataa tcagtctgtg gtgtgcgtta gctcgtgttt ttacaccgca ttcttgcgct
     2761 aaccttatga tctggcagac aacatgggag agacatcatg tggcaggcaa tcagtcgtct
     2821 tttgagcgag cagttaggtg aaggcgaaat cgaactgcgt aatgaactgc ctggcggaga
     2881 agtccatgcc gcatggcatt tgcgctatgc aggacatgac tttttcgtca aatgtgatga
     2941 aagggaactg cttcccggtt ttaccgccga agccgaccaa ctggagttac tgtcgcgtag
     3001 taaaaccgtc accgtgccta aggtttgggc agtaggcgct gaccgtgact acagttttct
     3061 ggtgatggat tatctcccac ctcgtccgct ggatgcgcat agcgcattta ttcttggtca
     3121 gcaaattgcg cgtttacatc aatggagtga ccaaccacaa tttggcctcg attttgataa
     3181 ctcgctctcc acaactccac agcccaacac ctggcaacgt cgctggtcaa cgttttttgc
     3241 tgaacaacgg attggctggc agttggaact ggcagcagag aaagggatcg ctttcggcaa
     3301 tatcgacgcc atcgtcgagc atattcagca gcgtctggcc tcgcatcaac cgcagccttc
     3361 tctgttgcac ggcgatttat ggtccggcaa ctgtgcgctg ggtccggatg gcccgtacat
     3421 tttcgaccct gcctgctact ggggtgaccg agagtgcgac ctggcgatgt taccgctgca
     3481 tactgaacag ccgccacaaa tctatgacgg ctatcagtca gtatccccgc tacctgccga
     3541 tttccttgaa cgtcaaccgg tttaccaact ctacacgctg ttaaatcgtg caaggttatt
     3601 tggcggtcag catttggtta ttgctcagca gtcactggat agattattag cagcatgata
     3661 tgggttgaag ataatggccg ctctgtgcgg ccttttgatt aaataaaccc aagcagagaa
     3721 aagaacacat aacctgcagc aatacaaata accggcagga tatacagtga gaaaaactgc
     3781 aggaaaatag tatggtgcgg aacaacaata cgggactcaa tttgttcacg cgttagcccc
     3841 tcttcccctt tggctttttc cagaatgagt tgatcttcaa caccttcccg caagaagcgc
     3901 gcctggcgac tcattcgggc accggaatcc tgcaacgcca gtccgacaaa aatcaggatg
     3961 aaaatcaccc agaacataac gttcacgcca ccattaaaat tgggcgtcgg ggagttatac
     4021 cagaacagat tcaaaaaagg cgtattcgcc tgcatcatat cgatcatgac atgagtaaag
     4081 tcgagcatga ccgcattaat gccttcctgg ttttcctgcc gggtattcat aaatttcagc
     4141 aaagaaatca atgtagagat caatgcaggt ataaaaatca cccaacccaa aatccttttc
     4201 aaaacagcaa tgcgtccagc ttgttgatac gtcatgagtt ctccttgatt aagacgcgtc
     4261 gtttcactta gtttacctgt agatatctgt tttcgcccat tctttaaagg cgatatgata
     4321 ggcgcttaat cataagcacg gcttaatacc ttacacataa tgctctaaag gagaggttgt
     4381 aatgtcaacc ccgcgtcaga ttcttgctgc aatttttgat atggatggat tacttatcga
     4441 ctcagaacct ttatgggatc gagccgaact ggatgtgatg gcaagcctgg gggtggatat
     4501 ctcccgtcgt aacgagctgc cggacacctt aggtttacgc atcgatatgg tggtcgatct
     4561 ttggtacgcc cggcaaccgt ggaatgggcc aagccgtcag gaagtagtag aacgggttat
     4621 tgcccgtgcc atttcactgg ttgaagagac acgtccatta ttaccaggcg tgcgcgaagc
     4681 tgttgcgtta tgcaaagaac aaggtttatt ggtgggactg gcctccgcgt caccactaca
     4741 tatgctggaa aaagtgttga ccatgtttga cttacgcgac agtttcgatg ccctcgcctc
     4801 ggctgaaaaa ctgccttaca gcaagccgca tccgcaagta tatctcgact gcgcagcaaa
     4861 actgggcgtt gacccactga cctgcgtggc gctggaagac tcggtaaatg gcatgatcgc
     4921 ttctaaagca gcccgcatgc gttccatcgt cgttcctgcg ccagaagcgc aaaatgatcc
     4981 acgttttgta ttagcaaacg tcaaactctc atcgctgaca gaactcaccg caaaagacct
     5041 tctcggttaa tgaccagggg cagtgatcac gctgcccctg gttctttatc tgaatttgca
     5101 ttcaactgac ggattaatcg tcaatttaag agaaagagtt acaccgtaac cacttccgtg
     5161 cactgtataa aaatcctata ctggacgtat cgacagttta gtgagtttta tcatgacggc
     5221 ggaaggtcac cttctctttt ctattgcttg tgcggtattt gccaaaaatg ccgagctgac
     5281 gcccgtgctg gcacagggtg actggtggca tattgtccct tccgcaatcc tgacgtgttt
     5341 gttaccggac atcgatcacc caaagtcgtt tcttgggcag cgattaaaat ggatatcaaa
     5401 accgatcgcc cgcgcttttg ggcatcgtgg ttttacccac agtctgctgg cggtatttgc
     5461 gctgctggca accttttacc ttaaggttcc ggaaggctgg ttcattccgg ctgatgcgct
     5521 acaaggaatg gtgctgggtt atttgagcca catacttgcc gatatgctga cacccgccgg
     5581 tgttcccctg ctctggccat gccgctggcg tttccgcttg ccgatcctag ttccccaaaa
     5641 gggcaaccaa ctggaacgtt ttatctgcat ggcattattt gtctggtcgg tatggatgcc
     5701 ccattcatta cccgagaaca gcgctgttcg ttggtcatcg caaataatca ataccttgca
     5761 gatccagttt catcggctta ttaagcatca ggttgaatac taaaaagaca aaaatcacct
     5821 ttctggaata agcaatttca tttgaatata agagccagct cacagttctg ttaatcttgc
     5881 gccaacacta tgactgctac gcagtgatag aaataataag atcaggagaa cggggatgaa
     5941 ctttccatta attgcgaaca tcgtggtgtt cgttgtactg ctgtttgcgc tggctcagac
     6001 ccgccataaa cagtggagtc tggcgaaaaa agtgctggtg ggtctggtga tgggtgtggt
     6061 ttttggcctt gccctgcata ccatttatgg ttctgacagc caggtactta aagattctgt
     6121 acagtggttt aacatcgttg gtaacggcta tgttcaactg ctgcaaatga tcgttatgcc
     6181 gttagtcttc gcctctattc tgagcgcggt tgcccgtctg cataacgcat ctcagttagg
     6241 caaaatcagt tttctgacca tcggtacgct tttgtttacc acgctgattg cggcgctggt
     6301 cggtgtgctg gtcaccaacc tgtttggttt gacggctgaa ggtctggttc agggtggtgc
     6361 agaaactgca cgtctgaacg ccattgaaag taactatgtt ggtaaagtct ttgatctgag
     6421 cgttccgcag ctggtcttgt cctttatccc gaaaaacccg tttgccgatc ttaccggagc
     6481 caatccgacg tcaattatca gcgtggtaat ttttgccgca ttcctcggcg tagctgcatt
     6541 gaaactgctg aaggatgatg cgccgaaagg tgaacgcgtc ttagccgcta tcgataccct
     6601 acaaagctgg gtgatgaaac tggttcgcct tgtcatgcag ttgacccctt acggcgttct
     6661 ggctctaatg accaaagtgg ttgcaggttc taacttgcaa gacatcatca aactgggaag
     6721 tttcgttgtc gcgtcctacc tcggtctgct gattatgttt gcagtgcatg gcattctgct
     6781 gggcattaat ggcgtgagtc cgctgaagta cttccgtaag gtatggcctg tgctgacgtt
     6841 tgcctttacc agccgttcca gtgctgcgtc tatcccactg aatgtggaag cacaaacgcg
     6901 tcgtctgggc gttcctgaat caatcgccag tttcgccgcc tctttcggtg caaccattgg
     6961 tcagaacggc tgcgccggtt tgtatccggc aatgctggcg gtgatggttg cgcctacggt
     7021 tggcattaac ccgctggacc cgatgtggat tgcgacgctg gtcggtattg ttaccgttag
     7081 ttccgcaggc gttgccggtg tcggtggtgg tgcaactttc gctgcactga ttgtgctgcc
     7141 tgcgatgggc ctgccagtaa ccctggtggc gctgttaatc tccgttgaac cgcttatcga
     7201 catgggccgt acggcgctaa acgttagtgg ctcgatgaca gctggcacgc tgaccagcca
     7261 gtggctgaag caaaccgata aagccattct ggatagcgaa gacgacgccg aactggcaca
     7321 ccgttaattc ttatgctggc aacggtccgt tttgtatagg ggccgttgct ttacttttta
     7381 aatgttccat cgcggcgatg catactgact catatttaaa cagatcgtca gcgaaaa
//
LOCUS       DADMHC010000191         7354 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.194, whole genome shotgun sequence.
ACCESSION   DADMHC010000191 DADMHC010000000
VERSION     DADMHC010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7354)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7354)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7354
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.194"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(77..418)
                     /locus_tag="JNZ57_003400"
     CDS             complement(77..418)
                     /locus_tag="JNZ57_003400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8829497.1"
                     /translation="MAEIKTLHLVPREGMQVSEKPSVARVRFGDGYEQRRPTGLNARL
                     KTFQAVFRVTDEATRRWLEEFLSWHGGYRAFLWRPPKHNRTVRVVCREWSVTDNARYS
                     DFSCTIEQVVN"
     gene            complement(411..3472)
                     /locus_tag="JNZ57_003401"
                     /pseudo
     CDS             complement(411..3472)
                     /locus_tag="JNZ57_003401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_304285.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
     gene            3517..3846
                     /locus_tag="JNZ57_003402"
     CDS             3517..3846
                     /locus_tag="JNZ57_003402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001325657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence hypothetical
                     protein"
                     /protein_id="HAY8829498.1"
                     /translation="MSKPRWTIEQKRQHVAAWRASGLTRQQYCELNDIPFTSLREWPQ
                     DVAKAERRANEPTVLPVHIAPPLHADVPQPVTNEPVTLFLPGGVRMCCQPSQLTDVFR
                     ALKYAQS"
     gene            3833..4225
                     /gene="tnpB"
                     /locus_tag="JNZ57_003403"
     CDS             3833..4225
                     /gene="tnpB"
                     /locus_tag="JNZ57_003403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000950651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HAY8829499.1"
                     /translation="MLSPDNVFIAIKPVDMRRGIDSLTQYIQDELRSTWHEGAAFVFV
                     NKARSRIKVLRWDKHGVWLCTRRLHKGSFRWPRANDAAWHLTPDEFNWLIAGVDWQQV
                     KGHDLTKWVWLNEPELRPENTQNTLLTQ"
     gene            4232..5833
                     /locus_tag="JNZ57_003404"
     CDS             4232..5833
                     /locus_tag="JNZ57_003404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001546148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66-like element ISEc49 family transposase"
                     /protein_id="HAY8829500.1"
                     /translation="MNIRIWSGILPCMDISALNTTNDIEKLRAMALAMVQEVMSENAE
                     KERELLEKSRRIQLLEEMLKLVRQQRFGKKCETLAGMQRSLFEEDVDADIAALTAHLD
                     KLLPQSPEEDEKASRSRPIRKPLPVHLPRVEKIIQPDTDHCPECDEPLHYIRDAVSEK
                     LEYIPAHFVVNRYVRPQYSCPCCQKVFSGEMPAHILPKSAVEPSVIAQVIINKYGDHL
                     PLYRQQQVFARSDVGLPVSSMADMVGAAGAALSPLAALLHRELINRPVVHADETTLKI
                     LNTKKGGKSCSGYLWAYVSGERTGPSVVCFDCRTGRSHEYPENWLQGWGGTLVVDGHK
                     AYRTLANKVPEITLAGCWAHARRGFADLYKISKDPRAAIAVKKIAGLYRLEKKISSRP
                     VEKIRQWRQRYARPILEELWSWLEEQEPQCSPGKALHKAIAYALSHRVELSRFLEDGA
                     VPLDNNVCERAIKNVVLGRKSWLFAGSQMAGERAAQIMSLLETAKRNGLEPHAWLTDV
                     LMRLPEWPEERLAELLPLEGFTFSG"
     gene            complement(5968..6228)
                     /locus_tag="JNZ57_003405"
     CDS             complement(5968..6228)
                     /locus_tag="JNZ57_003405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000224021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829501.1"
                     /translation="MATLRELIIKIVSFRGTHIDAFFRRASSAAHTNARGLITVDLFC
                     CTEAIARQVPEAGSEVLSSVIASGREVLTRGLIAGDDVLTRE"
     gene            complement(6276..6485)
                     /locus_tag="JNZ57_003406"
     CDS             complement(6276..6485)
                     /locus_tag="JNZ57_003406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4035 domain-containing protein"
                     /protein_id="HAY8829502.1"
                     /translation="MWMEFDRISPLGDERGDIRNAQIVKAVFGAQGMNVALKDVMLCW
                     GEDEDKPEVDPFAALEDALSFAAQS"
     gene            complement(6581..6955)
                     /locus_tag="JNZ57_003407"
     CDS             complement(6581..6955)
                     /locus_tag="JNZ57_003407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8829503.1"
                     /translation="MKKDLKTLALARLSGFRHKTVKVPEWGNVSVVLREPSAEAWYLW
                     QEVLNGDGEDDDTLSVVAKTRRNLEADVTLFCDVLCDTDLQRVFTPDDREQVLAVYGP
                     VHARLLRQALELIADAESARKK"
     gene            complement(6970..>7354)
                     /locus_tag="JNZ57_003408"
     CDS             complement(6970..>7354)
                     /locus_tag="JNZ57_003408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8829504.1"
                     /translation="LAEVRQHTWSSGTNGVVAATFSLRLKGKPVSFVVPLAFVKNLDK
                     TLTVNTGALLTMSVSANGGMPPYKYAWKKDGQPVDGQTTDTFSKPGAQSADAGKYTCV
                     VTDSAEKAQSVTSVECTVTVSAAAG"
BASE COUNT         1592 a         2298 c         1800 g         1664 t
ORIGIN      
        1 atttcccaga gtaccacccg cggtgactgc tctgatttaa ccgactcgct cagactttct
       61 tcgtgaatat cctgcatcag ttcaccacct gctcaatcgt acaactgaaa tcactgtacc
      121 tggcgttatc tgtgacgctc cactcccggc ataccaccct caccgtccgg ttatgtttcg
      181 gcggtcgcca caaaaaggca cggtaaccac catgccacga taaaaactct tccagccatc
      241 gccgggtcgc ctcatccgtc acccggaaca ccgcctgaaa cgtcttcagt cgggcattaa
      301 gtcccgtcgg gcggcgctgt tcataaccgt caccaaaccg taccctcgcc accgacggtt
      361 tctcactcac ctgcatccct tcacgcggga ccagatgcag cgtttttatc tcagccactc
      421 agcattcctc cgtcacgtcg catggacagc atcaccgcct gcacccgctg gtcaatcagt
      481 tgcacaaggc tgcccgcagc ttccggccct atctggccat tagtcccgtc attctgaatg
      541 gcgatatggt agaccgggga atacaccaga cctgcactgc cgttcatact gcccaccgct
      601 cgcacaccca gcgagccatc cgccgcccgg gtcaggggca taatggcttc aggaccggcc
      661 tcccccatca gtcccgcccc ttttgcaaag gcaaagtacg tgggcgtatc cacaatactg
      721 ttgctgtacg cactcaggtt tgccgaggta tacacaccgc cttttgcatt ggccaccgca
      781 ccgcccagcc agctaccaat actgccgata aatcctcccg ctccggacat actgtttgcc
      841 gccgtcttga tcccgttgac aatcgcggca ttcataagaa cttttgatat ttcctgcagc
      901 actgatgagg cccagctgcg ccattccact ttatttccgt tcagcatctc cgtgatgtta
      961 ttcaccatcc ctgagatacc ctccgtcgca agctgtactg cctgtgaggc gtaatcggac
     1021 gcattatcca cccagttact gaatccctcc tgcagccctt tctgccagtc cgcacgctgc
     1081 acatccgatt cggcataaaa ggcttcctgc tctttcagac gttcactcag atactgcgcg
     1141 ttctgtgcca gagcctgtct gtaaaaatcc tcactgatat ccccggtctg atactgagac
     1201 tgaaggtccg catccttctg gcggaaactg tcgcggatct gctgcaactc ccgcatgcgt
     1261 tcacggagcc gctctccctg cccgtacccc agcagttccg cttcatttga tgcacgcgca
     1321 gccacattat cattcttcag ggtctcttcc cgggaccgca actgctcccg gattttttgc
     1381 tggtcaatca gggccgcatt gcgcagcagt tcctgcttct gcatctccgt cagggttttc
     1441 agttcgccct gcgcagtctg gtatttcagc ttcgccagct ctgtattctg ccccgccagt
     1501 gccagttgct ctttctgctg cttcagcagc cgggaaaaac tgtcttccgc tttttccgtc
     1561 tctgattttc caccccggga tttgggttta ttcgcctcgt tattgcgcca ggcttccagg
     1621 gcattactga tataacgttg tctcgcctcc tgatacggat cacccacaaa accgaggtca
     1681 tccgccgcat accccagtcg gacacgctct gtttttgtca gggcactctg ctgtttatca
     1741 tccagagtgg cctgtggcag ccgtaacggc acattcacca gtccctgccg ctgctgaagc
     1801 agttcattac ccagccccag cagacggttg aattccgtat gctgaccgtt cataaccagc
     1861 atggactggt acaccttatt ctgctctgcc gcctgctgac gaattaacgc cacacgacgg
     1921 tcgtccagcc cgggttcgcc agaacatact gatattctgc gattttttcc tgcagggatt
     1981 tcacccgact agcctgttca tcaatcagcc ggttctgctc tgtcagcgcc gcccgtgttc
     2041 gtccttcatt atctgaggct tcaggcaaag acattgacgg cgttttatgc gcgatttcat
     2101 ctatcgtcag tgcatactgg cgcgcagact cccaggcctg ctcctgattc tggtacagcg
     2161 tgtaccatgc tgcagccccc agcatcacca gtccgggtac gccaccaacc agccccagcg
     2221 caccgctcat cagacgtgag cccaccgccg ttgtactgtt cagcgcattc tgggcggcgc
     2281 ttctggcagc aatatttctg ttcaggcgtt cctgtgtggc cgccagacgg gcctctgcag
     2341 caatctgcat ctccgtcccg cgggctgccg ccacggcctg ctgagcacgg tacacggctg
     2401 cccttgcccg cgccgtggca atctgcgttc ccctgaactg tgcttccgcc agtgcaactt
     2461 cattacgtgc agccgtcaca agtcctgccg tggcagacat cgctccggag gccatattgc
     2521 caaagtaccg ggcaaccccg acggcaacca gcgcccccac agctgttgcc acattatcaa
     2581 tctgtccggc aacaccgttc agcacgccgg agagcgtttt tgtcaccccg caggcctcat
     2641 tcacttcgcc cacccaggcc ataaaggcgt tttccacctt cgtgatacta ccggaaaccg
     2701 tttccggcat ggccgcatat tcatcacgta atatccccag ctggctgatt aacgcaggga
     2761 ccactttatc cgctgtcagt tttccgtcat ccgccattgc cttcagatct ttacgggcca
     2821 cacccatccc cgcagcaagc gcgcggatca cccggtcgcc attttcgtta acagcattaa
     2881 attcttcgcc acgcagtaca ccctgtgcca gtgcctggct gaactgggtg atcaccgaac
     2941 cggattccgc aactccagcc cctgacagtt tcagtcctgt cgaaatggcc tccgtcacct
     3001 tcagcacatc atcagcactg taaccatatt cacgcatcga ggcagccgaa cgggcaaaca
     3061 gggccgcatt atccgaaaac gcggtacctg ttcgctgact gatatccatc agcactttct
     3121 gtgatgacga gaattcatcc gatgactgag atgcctgttt cagacgggca ttcacggaac
     3181 cccactcatc ggccagcgaa atcaggtgtc cggtggcaaa ggcaccggca aatgcgccag
     3241 ccattccgac agcagaaccg cgaatttccg tcaactgact gttcagttct gcaagggcgc
     3301 ggcgctgttc ccgtgcggca gcagcggcat gacgtccgcc attctgtagg gtccggtaat
     3361 attcactgcc catacgggac gcccgctgga tctccgactg gaatgactgt gaatttgccg
     3421 aaattttgag tgtcgttacg gggaagtcat cttcataggg atcttcggtc agttagtatt
     3481 accgacatcc attcaccaac ttaccggaga taatcgatgt caaaaccccg atggaccatt
     3541 gaacagaaaa ggcagcacgt tgctgcctgg cgcgccagtg gtcttacacg tcagcaatac
     3601 tgtgaactca acgatattcc cttcacatca cttcgcgaat ggccgcagga tgtcgcaaaa
     3661 gctgaacgcc gggcaaatga accgaccgtt cttcccgttc atattgcgcc accactgcat
     3721 gctgatgtac cacagcccgt cacgaatgag ccagtcacgc tcttccttcc cggtggagta
     3781 cggatgtgct gtcagccgtc acaacttacc gatgtcttca gggcactcaa atatgctcag
     3841 tcctgataat gtcttcatcg caattaaacc tgttgacatg cgccggggca tcgactcact
     3901 gacgcagtat atacaggatg aactccggtc gacatggcat gagggagccg ccttcgtctt
     3961 tgttaacaaa gcccgttcgc gtatcaaagt tctccggtgg gataaacacg gggtgtggtt
     4021 gtgtacccgc cgtctgcaca aaggcagctt ccgctggcca cgtgcaaatg acgctgcctg
     4081 gcacctcact cccgacgagt ttaactggct gattgccggt gttgactggc agcaggttaa
     4141 gggacatgac ctgacgaaat gggtctggct gaatgaacct gaactgcgcc ctgaaaacac
     4201 gcaaaataca ctgctaactc agtgaaaaat aatgaatatc cgtatctgga gtggtatact
     4261 cccctgtatg gatatctccg ctctcaacac cacgaatgac atcgaaaaac tgcgtgctat
     4321 ggcacttgcc atggtacaag aagtcatgtc ggagaatgcc gaaaaagagc gggaattact
     4381 ggagaaaagc cggcgcatcc agcttctgga agaaatgctg aaactggttc gtcaacagcg
     4441 cttcggaaaa aaatgtgaaa cgctggctgg tatgcaacgc tccctattcg aagaggatgt
     4501 tgatgccgat atcgccgcgc ttaccgcaca tctggataaa ctgctcccgc aatcccctga
     4561 agaagatgaa aaagcgtccc gttcacgccc gatacgcaaa cccttaccgg ttcatcttcc
     4621 acgggtggaa aaaattatcc agccggacac tgaccattgc cctgaatgtg acgagccgct
     4681 gcactatatc cgcgatgcgg tgagtgaaaa gctggagtat attcccgctc actttgtggt
     4741 gaaccgttat gtccgtccgc aatacagttg tccctgttgc cagaaggtgt tcagcggtga
     4801 aatgccggca catatcctcc cgaaaagtgc cgttgagcca tcagtcatcg cacaggtgat
     4861 catcaataaa tacggtgacc acctgcctct gtatcgccag caacaggtct ttgcccgttc
     4921 agatgtcggg ctgcccgtca gttcgatggc tgacatggtt ggcgcggcgg gtgccgcatt
     4981 atctcccctg gcggcgttac tccatcgcga gttgataaac cgtccggtgg tgcatgcaga
     5041 tgagactacc ctgaagatcc tgaacacgaa gaaaggcggt aaatcctgct ccggttatct
     5101 gtgggcatac gtcagtggag aaaggacggg accgtcagtt gtgtgcttcg actgccggac
     5161 cggacgtagc catgagtatc ctgaaaactg gcttcagggc tggggcggga cgctggttgt
     5221 cgacggacat aaagcttacc ggactctggc aaacaaagtg ccggagatca cgctggccgg
     5281 atgctgggcc catgcccgca ggggcttcgc cgacctgtat aaaatcagta aagatccacg
     5341 ggctgccata gccgtgaaga aaatcgcggg gttgtaccgt cttgagaaga agatcagtag
     5401 ccgccccgtg gaaaaaatcc gccagtggcg acagcgttat gcccgtccga tactggaaga
     5461 actgtggtca tggcttgaag agcaggaacc gcaatgttct ccgggaaagg cattacacaa
     5521 agccattgcc tatgcgctgt ctcatcgcgt ggaactgagc cgcttcctgg aagatggtgc
     5581 ggtgccgctg gataataatg tgtgtgaacg ggccatcaaa aacgtggttc tgggcagaaa
     5641 atcgtggctg ttcgccggtt cgcagatggc gggagaacgc gccgcgcaaa taatgagctt
     5701 gctggaaacc gcgaaacgca acggtctgga gccgcatgcc tggttgacag acgtcctgat
     5761 gcgtctgccg gagtggccgg aggagcgact ggcagagttg ctgcctcttg agggatttac
     5821 cttctccggg tgagtgatac ctgccgtcag gtgttcgtgc accgggccat aacctgcagt
     5881 cgggagttga actcctgacg gcaggaaatg agccagacca gcaaccacgc gggctgacag
     5941 cgaataagaa cctgaatcag cccggagtca ttcccgggtc agtacatcat cacctgcaat
     6001 taatccccga gtcagtactt cgcggcctga cgcgatcacg ctactcagta cttcagagcc
     6061 cgcctccggt acctgcctgg cgatcgcctc tgtgcaacaa aataaatcaa ccgttatcaa
     6121 accacgagcg ttcgtatgcg ccgccgatga cgcgcgcctg aaaaatgcgt caatatgagt
     6181 tccccggaag cttacaattt tgataatcag ttcacgtaac gtcgccattc acctttctcc
     6241 gggcgtaaaa aaaccgcctc agcggttctc atcattcatg actgtgctgc aaagctcagc
     6301 gcgtcttcca gcgccgcaaa cggatccacc tccggcttat cctcatcctc gccccagcag
     6361 agcatgacgt ccttcagtgc aacattcatc ccctgtgccc cgaaaaccgc tttcacgatc
     6421 tgtgcattac ggatatcccc gcgctcatca cccagcgggg atatcctgtc gaactccatc
     6481 cacatcatcg cctcgctcgc actcaggctg tggcgcagtt cggataaggt gcgccccaga
     6541 cggagcgcaa gtcgcatcag aaagcgaatt tccgggcggg ctactttttt ctggccgact
     6601 ctgcatcagc gatcagttcc agtgcctgac gcagcaaccg ggcatgtacc ggaccataga
     6661 cggccagcac ctgctcacgg tcgtccggag tgaacacccg ctgcaggtcc gtatcacaca
     6721 ggacatcgca gaacagcgtc acatccgctt ccaggttacg gcgggttttc gccaccaccg
     6781 acagggtatc gtcatcctct ccatcaccat tgagcacttc ctgccacaga taccaggcct
     6841 ctgccgaagg ctcccgcagc accacgctga cattccccca ttccggcacc ttcaccgttt
     6901 tatgacgaaa ccctgacagt ctggccagcg ccagcgtttt cagatccttt ttcatgatga
     6961 cccatcccct tatccggcag ctgcgctcac tgtcacggtg cattcaacag acgtcacact
     7021 ctgtgctttc tctgccgaat cggtcaccac gcaggtatat ttccccgcat cagcggactg
     7081 cgcacctggc ttactgaagg tgtctgtcgt ctgcccgtca accggctgac catccttctt
     7141 ccaggcgtat ttatacggcg gcattccccc gttggcactg actgacattg tcagcagcgc
     7201 accggtattc acggtaagtg tcttatccag atttttcaca aacgccagcg gtaccacaaa
     7261 ggacaccggt ttgcctttca gacgcagtga gaacgttgca gccaccacac cgttggtacc
     7321 ggatgaccag gtgtgctgac gcacttccgc cagg
//
LOCUS       DADMHC010000192         7217 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.195, whole genome shotgun sequence.
ACCESSION   DADMHC010000192 DADMHC010000000
VERSION     DADMHC010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7217)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7217)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7217
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.195"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..227)
                     /locus_tag="JNZ57_003409"
     CDS             complement(<1..227)
                     /locus_tag="JNZ57_003409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_705972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2541 family protein"
                     /protein_id="HAY8829505.1"
                     /translation="MKSVFTISASLAISLMLCCTAQANDHKLLGVIAMPRNETNDLAL
                     KLPVCRIVKRIQLSADHGDLQLSGASVYFKAA"
     gene            604..2520
                     /gene="dnaK"
                     /locus_tag="JNZ57_003410"
     CDS             604..2520
                     /gene="dnaK"
                     /locus_tag="JNZ57_003410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001737966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HAY8829506.1"
                     /translation="MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQ
                     DGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAW
                     VEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI
                     AGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEV
                     LATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSA
                     QQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDI
                     DDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLL
                     DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAAD
                     NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLN
                     EDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE
                     SALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHAQQQTAGADASANNAKDD
                     DVVDAEFEEVKDKK"
     gene            2609..3739
                     /gene="dnaJ"
                     /locus_tag="JNZ57_003411"
     CDS             2609..3739
                     /gene="dnaJ"
                     /locus_tag="JNZ57_003411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HAY8829507.1"
                     /translation="MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAE
                     AKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIF
                     GGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQT
                     CPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPA
                     GVDTGDRIRLAGEGEAGQHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAAL
                     GGEIEVPTLDGRVKLKVPGETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLN
                     EKQKQLLQELQESFGGPTGEHNSPRSKSFFDGVKKFFDDLTR"
     gene            complement(3843..4052)
                     /gene="mokC"
                     /locus_tag="JNZ57_003412"
     CDS             complement(3843..4052)
                     /gene="mokC"
                     /locus_tag="JNZ57_003412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin MokC"
                     /protein_id="HAY8829508.1"
                     /translation="MLNTCRVPLTDRKVKEKRAMKQHKAMIVALIVICITAVVAALVT
                     RKDLCEVHIRTGQTEVAVFTAYESE"
     gene            4581..5747
                     /gene="nhaA"
                     /locus_tag="JNZ57_003413"
     CDS             4581..5747
                     /gene="nhaA"
                     /locus_tag="JNZ57_003413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HAY8829509.1"
                     /translation="MKHLHRFFSSDASGGIILIIAAILAMMMANSGATSGWYHDFLET
                     PVQLRVGSLEINKNMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAI
                     GGMIVPALLYLAFNYADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALA
                     IIDDLGAIIIIALFYTNDLSMASLGVAAVAIAVLAVLNLCGVRRTGVYILVGVVLWTA
                     VLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSL
                     QGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMAVGIL
                     CGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLRPSV"
     gene            5813..6712
                     /gene="nhaR"
                     /locus_tag="JNZ57_003414"
     CDS             5813..6712
                     /gene="nhaR"
                     /locus_tag="JNZ57_003414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_705976.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional activator NhaR"
                     /protein_id="HAY8829510.1"
                     /translation="MSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEE
                     RLQGKLFKRKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADA
                     LSKRLVSSVLNAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGL
                     FSVRIGECGVSFWCTNPPPEKPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEI
                     LGEFDDAALMKAFGAMHNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERM
                     IQHPAVQRICNTDYSALFSPAAR"
     gene            complement(6750..>7217)
                     /locus_tag="JNZ57_003415"
     CDS             complement(6750..>7217)
                     /locus_tag="JNZ57_003415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000871680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829511.1"
                     /translation="RFNYNLNTILLVNLMTCGFEDQSIDTGRFVLSRINNENYQFHHI
                     RFDCIQGEQGELVFEPSDVEYYFEPVTIQESGTSILKNELENSEDGAGQVGFQLSNDG
                     TNEIQYGKSNYYSFQHPHEGSNQIPLFIRPRTYGNNVSSGQIMSRVKIVVMYN"
BASE COUNT         1847 a         1684 c         1855 g         1831 t
ORIGIN      
        1 gcggctttga aataaaccga tgcaccgctt aactgtaaat cgccatggtc ggcagagagt
       61 tgtatgcgtt tcacaatgcg acaaacagga agtttcagcg ccagatcgtt ggtttcgtta
      121 cgcggcattg caatgacgcc gaggagttta tggtcgtttg cctgcgccgt gcagcacagc
      181 atcaggctaa tcgccaggct ggcggaaatc gtaaaaacgg attttataag gattctctta
      241 gtgggaagag gtagagggat gaatacccac tagtttactg ctgataaaga gaagattcag
      301 gtacgtaatc ttttcttttt attacaattt tttgatgaat gccttggctg cgattcattc
      361 tttatatgaa taaaattgct gtcaatttta cgtcttgtcc tgccatatcg cgaaatttct
      421 gcgcaaaagc acaaaaaatt tttgcatctc ccccttgatg acgtgggtta cgaccccatt
      481 tagtagtcaa ccgcagtgag tgagtctgca aaaaaatgaa attgggcagt tgaaaccaga
      541 catttcgccc ctattacaga ctcacaacca catgatgacc gaatatatag tggagacgtt
      601 tagatgggta aaataattgg tatcgacctg ggtactacca actcttgtgt agcgattatg
      661 gatggcacca ctcctcgcgt gctggagaac gccgaaggcg atcgcaccac gccttctatt
      721 attgcctata cccaggatgg tgaaactctg gttggtcagc cggctaaacg tcaggcagtg
      781 acgaacccgc aaaacaccct gtttgcgatt aaacgcctga ttggccgccg cttccaggac
      841 gaagaagtac agcgtgatgt ttccatcatg ccgttcaaaa ttattgctgc tgataacggc
      901 gacgcatggg tcgaagttaa aggccagaaa atggcaccgc cgcagatttc tgctgaagtg
      961 ctgaaaaaaa tgaagaaaac cgctgaagat tacttgggtg aaccggtaac tgaagctgtt
     1021 atcaccgtac cggcatactt taacgatgct cagcgtcagg caaccaaaga cgcaggccgt
     1081 atcgctggtc tggaagtaaa acgtatcatc aacgaaccga ccgcagctgc gctggcttac
     1141 ggtctggaca aaggtactgg caaccgtact atcgcggttt atgacctggg tggtggtact
     1201 ttcgatattt ctattatcga aatcgacgaa gttgatggcg aaaaaacctt cgaagttctg
     1261 gctaccaacg gtgataccca cctgggtggt gaagacttcg acagccgtct gatcaactac
     1321 ctggttgaag aattcaagaa agatcagggc attgacctgc gcaacgatcc gctggcaatg
     1381 cagcgcctga aagaagcggc agaaaaagcg aaaatcgaac tgtcttccgc tcagcagacc
     1441 gacgttaacc tgccgtacat cactgcagat gcgaccggtc cgaaacacat gaacatcaaa
     1501 gtgactcgtg cgaaactgga aagcctggtt gaagatctgg taaaccgttc cattgagccg
     1561 ctgaaagttg cactgcagga cgctggcctg tccgtatctg atatcgacga cgttatcctc
     1621 gttggtggtc agactcgtat gccaatggtt cagaagaaag ttgctgagtt ctttggtaaa
     1681 gagccgcgta aagacgttaa cccggacgaa gctgtagcaa tcggtgctgc tgttcagggt
     1741 ggtgttctga ctggtgacgt gaaagacgta ctgctgctgg acgttacccc gctgtctctg
     1801 ggtatcgaaa ccatgggcgg tgtgatgacg acgctgatcg cgaaaaacac cactatcccg
     1861 accaagcaca gccaggtgtt ctctaccgct gaagacaacc agtctgcggt aaccatccat
     1921 gtgctgcagg gtgaacgtaa acgtgcggct gataacaaat ctctgggtca gttcaacctg
     1981 gatggtatca acccggcacc gcgcggcatg ccgcagatcg aagttacctt cgatatcgat
     2041 gctgacggta tcctgcacgt ttccgcgaaa gataaaaaca gcggtaaaga gcagaagatc
     2101 accatcaagg cttcttctgg tctgaacgaa gatgaaatcc agaaaatggt acgcgacgca
     2161 gaagctaacg ccgaagctga ccgtaagttt gaagagctgg tacagactcg caaccagggc
     2221 gaccatctgc tgcacagcac ccgtaagcag gttgaagaag caggcgacaa actgccggct
     2281 gacgacaaaa ctgctatcga gtctgcactg actgcactgg aaactgctct gaaaggtgaa
     2341 gacaaagccg ctatcgaagc gaaaatgcag gagctggcac aggtttccca gaaactgatg
     2401 gaaatcgccc agcagcaaca tgcccagcag cagactgccg gtgctgatgc ttctgcaaac
     2461 aacgcgaaag atgacgatgt tgtcgacgct gaatttgaag aagtcaaaga caaaaaataa
     2521 tcgccctata aacgggtaat tatactgaca cgggcgaagg ggaatttcct ctccgcccgt
     2581 gcattcatct aggggcaatt taaaaaagat ggctaagcaa gattattacg agattttagg
     2641 cgtttccaaa acagcggaag agcgtgaaat caaaaaggcc tacaaacgcc tggccatgaa
     2701 ataccacccg gaccgtaacc agggtgacaa agaggccgag gcgaaattta aagagatcaa
     2761 ggaagcttat gaagttctga ccgactcgca aaaacgtgcg gcatacgatc agtatggtca
     2821 tgctgcgttt gagcaaggcg gcatgggcgg cggcggtttt ggcggcggcg cagacttcag
     2881 cgatattttt ggtgacgttt tcggcgatat ttttggcggc ggacgtggtc gtcaacgtgc
     2941 ggcgcgcggt gctgatttac gctataacat ggagctcacc ctcgaagaag ctgtacgtgg
     3001 cgtgaccaaa gagatccgca ttccgactct ggaagagtgt gacgtttgcc acggtagcgg
     3061 tgcaaaacca ggtacacagc cgcagacctg tccgacctgt catggttctg gtcaggtgca
     3121 gatgcgtcag ggtttctttg ccgtgcagca gacctgtcca cactgtcagg gccgcggtac
     3181 gctgatcaaa gatccgtgca acaaatgtca tggtcatggt cgtgttgagc gcagcaaaac
     3241 gctgtccgtt aaaatcccgg caggggtgga cactggagac cgcatccgtc ttgcgggcga
     3301 aggtgaagcg ggccagcatg gcgcaccggc aggcgatctg tacgttcagg ttcaggttaa
     3361 acagcacccg attttcgagc gtgaaggcaa caacctgtat tgcgaagtcc cgatcaactt
     3421 cgctatggcg gcgctgggtg gcgaaatcga agtaccgacc cttgatggtc gcgtcaaact
     3481 gaaagtgcct ggcgaaaccc agaccggtaa gcttttccgt atgcgcggta aaggcgtcaa
     3541 gtctgtccgc ggtggcgcac agggtgattt gctgtgccgc gttgtcgtcg aaacaccggt
     3601 aggcctgaac gagaagcaga aacagctgct gcaagagctg caagaaagct tcggtggccc
     3661 aaccggcgag cacaacagcc cgcgctcaaa gagcttcttt gatggtgtga agaagttttt
     3721 tgacgacctg acccgctaac ctccccaaaa gcctgcccgt gggcaggcct aggtaaaaat
     3781 agggtgcgtt gaagatatgc gagcacctgt aaagtggcgg ggatcactcc ccgccgttgc
     3841 tcttactcgg attcgtaagc cgtgaaaaca gcaacctccg tctggccagt tcggatgtga
     3901 acctcacaga ggtcttttct cgttaccagc gccgccacta cggcggtgat acagatgacg
     3961 atcagggcga caatcatcgc cttatgctgc ttcattgctc tcttctcctt gaccttacgg
     4021 tcagtaagag gcactctaca tgtgttcagc atataggggg cctcgggttg atggtaaaat
     4081 atcactcggg gcttttctct atctgccgtt cagctaatgc ctgagacaga cagcctcaag
     4141 cacccgccgc tattatatcg ctctctttaa cccattttgt tttatcgatt ctaatcctga
     4201 agacgcctcg catttttgtg gcgtaatttt ttaatgattt aattatttaa ctttaattta
     4261 tctctttatc gcaattattg acgacaagct ggattatttt tgaaatattg tcctaacaaa
     4321 taacgccgac tgacaagaaa ttaattatta cttttcctaa ttaatccctc agaaatcctc
     4381 accttaagct atgattatct gagcttaggg tcactcgtca gcgcttacag ccgtcaaaaa
     4441 ctcatctcac cgctgatggc gcaaattcta caaaggctcg taaaaaacga attattccta
     4501 cactataatc tgattttaac gatgattcgt gcggggtaaa atagtaaaaa cgatctattc
     4561 acctgaaaga gaaataaaaa gtgaaacatc tgcatcgatt ctttagcagt gatgcctcgg
     4621 gaggcattat tcttatcatt gccgctatcc tggcgatgat gatggccaac agcggcgcaa
     4681 ccagtggatg gtatcacgac tttctggaga cgccggttca gctccgggtt ggttcactcg
     4741 aaatcaacaa aaacatgctg ttatggataa atgacgcgct gatggcggta tttttcctgt
     4801 tagtcggtct ggaagttaaa cgtgaactga tgcaaggatc gctagccagc ttacgccagg
     4861 ccgcatttcc agttatcgcc gctattggtg ggatgattgt gccggcatta ctctatctgg
     4921 cctttaacta tgccgatccg attacccgcg aagggtgggc gatcccggcg gctactgaca
     4981 ttgcctttgc acttggtgtg ctggcgctgt tgggaagtcg tgttccgtta gcactgaaga
     5041 tctttttgat ggctctggct attatcgacg atcttggggc catcattatc atcgcattgt
     5101 tctacactaa tgacttatcg atggcctctc ttggcgtcgc ggctgtagca attgcggtac
     5161 tcgcggtatt gaatctgtgt ggtgtacgcc gcacgggcgt ctatattctg gttggcgtag
     5221 tgttgtggac tgcggtgttg aaatcggggg ttcacgcaac cttggcgggg gtaattgtcg
     5281 gcttctttat tcctttgaaa gagaagcatg ggcgttctcc agcgaagcga ctggagcatg
     5341 tgttacaccc gtgggtggcg tatctgattt tgccgctgtt tgcatttgct aatgctggcg
     5401 tttcactgca aggcgtcacg ctggatggct tgacctccat tctgccattg gggatcatcg
     5461 ctggcttgct gattggcaaa ccgctgggga ttagtctgtt ctgctggttg gcgctgcgtt
     5521 tgaaactggc gcatctgcct gagggaacga cttatcagca aattatggcg gtggggatcc
     5581 tgtgcggtat cggttttact atgtctatct ttattgccag cttggccttt ggtagcgtag
     5641 atccagaact gattaactgg gcgaaactcg gtatcctggt cggttctatc tcttcggcgg
     5701 taattggata cagctggtta cgcgttcgtt tgcgtccatc agtgtgacag gacggtttac
     5761 cggggagcca taaacggctc ccttttcatt gttatcaggg agagaaatga gcatgtctca
     5821 tatcaattac aaccacttgt attacttctg gcatgtctat aaagaaggtt ccgtggttgg
     5881 cgcagcggag gcgctttatt taactccaca aaccattacc ggacagatcc gggctctgga
     5941 agagcgcctg caaggcaaat tatttaagcg caagggacgt ggtctcgaac ccagcgagct
     6001 gggagaactg gtctatcgct atgccgataa aatgttcacc ttaagccagg aaatgctgga
     6061 tattgtgaac tatcgcaaag aatccaattt attgtttgac gttggcgtgg ctgatgcact
     6121 ttccaaacgc ctggtcagta gcgtgctgaa tgctgcagtg gtagaaggcg agccgattca
     6181 tcttcgctgc ttcgaatcca cccacgaaat gctactggag caattaagcc agcataaact
     6241 ggatatgatc atttccgact gtccgataga ctctacgcag caggaaggcc tgttctccgt
     6301 gagaattggc gaatgtggcg tgagtttctg gtgtacaaat ccaccaccag aaaaaccgtt
     6361 cccggcttgt ctggaagaac ggcgactttt gattcctggg cgacgttcaa tgttagggcg
     6421 caaattgctt aactggttta actcccaggg attaaacgta gaaatcctcg gcgagtttga
     6481 tgatgccgcg ttgatgaaag cttttggtgc aatgcacaat gcaatcttcg ttgccccaac
     6541 gctttatgca tatgactttt atgccgataa aactgtcgta gaaattggtc gcgtcgagaa
     6601 tgtgatggaa gagtaccatg ctatttttgc tgagcggatg attcagcacc cggcggtaca
     6661 gcgaatctgc aatacggatt attctgcgct ttttagtcca gcggcgcgtt aatcggcagc
     6721 tcccccaaag ttaaagtgga ggagatagat tagttgtaca taaccacgat tttgactcgg
     6781 ctcattattt gcccgcttga gacattattt ccatatgtac gcgggcgaat aaatagagga
     6841 atctgattac ttccttcatg gggatgctga aaagagtagt aattgctttt accatactgg
     6901 atttcattcg taccatcatt ggagagttga aagcctactt gacccgcacc gtcctcactg
     6961 ttttctaact cattttttaa tatgctggtt cctgactcct gtatcgtcac tggttcaaag
     7021 taatattcaa catcactggg ttcaaaaact aattcacctt gctcgccctg gatgcagtca
     7081 aatcttatat gatgaaactg ataattttca ttattgatac gagacagtac aaatcgtcca
     7141 gtgtcgatgg attgatcttc aaaaccacag gtcattaaat ttaccagtaa aatagtattt
     7201 aaattataat taaagcg
//
LOCUS       DADMHC010000193         7203 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.196, whole genome shotgun sequence.
ACCESSION   DADMHC010000193 DADMHC010000000
VERSION     DADMHC010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7203
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.196"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..313
                     /locus_tag="JNZ57_003416"
     CDS             <1..313
                     /locus_tag="JNZ57_003416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001268525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HAY8829512.1"
                     /translation="SEGKVDESIQWLKKSAEHGNNYAQYQMSKYLLKIGDIRGSEYYL
                     NLSADNGCVFAIKDIIKNMMDSGKYDDALIWVEKLKKLYPDTNTELYIQKITQKKKQS
                     K"
     gene            complement(655..1605)
                     /gene="cbl"
                     /locus_tag="JNZ57_003417"
     CDS             complement(655..1605)
                     /gene="cbl"
                     /locus_tag="JNZ57_003417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator Cbl"
                     /protein_id="HAY8829513.1"
                     /translation="MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDEL
                     GIEIFVRRGKRLLGMTEPGKALLVIAERILNEASNVRRLADLFTNDTFGVLTIATTHT
                     QARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVA
                     FPWFRWHHSLLVPLDHPLTQITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLA
                     DIVLSAQDSDVIKTYVALGLGIGLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKR
                     GQLQRNYVWRFLELCNAGLSVEDIKRQVMENSEEEIDYQI"
     gene            complement(1707..2636)
                     /gene="nac"
                     /locus_tag="JNZ57_003418"
     CDS             complement(1707..2636)
                     /gene="nac"
                     /locus_tag="JNZ57_003418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen assimilation transcriptional regulator"
                     /protein_id="HAY8829514.1"
                     /translation="MNFRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLEGELN
                     QQLLIRTKRGVTPTDAGKILYTHARAILRQCEQAQLAVHNVGQALSGQVSIGFAPGTA
                     ASSITMPLLQAVRAEFPEIVIYLHENSGAVLNEKLINHQLDMAVIYEHSPVAGVSSQA
                     LLKEDLFLVGTQDCPGQSVDVNAIAKMNLFLPSDYSAIRLRVDEAFSLRRLTAKVIGE
                     IESIATLTAAIASGMGVAVLPESAARSLCGAVNGWMSRITTPSMSLSLSLNLPARANL
                     SPQAQAQAQAVKELLMSVISSPVMEKRQWQLVS"
     gene            2963..3038
                     /locus_tag="JNZ57_003419"
     tRNA            2963..3038
                     /locus_tag="JNZ57_003419"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2996..2998,aa:Asn,seq:gtt)
     gene            complement(3094..4029)
                     /gene="ldtA"
                     /locus_tag="JNZ57_003420"
     CDS             complement(3094..4029)
                     /gene="ldtA"
                     /locus_tag="JNZ57_003420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310812.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HAY8829515.1"
                     /translation="MMRRVNIFCSFALLFASHTSLAVTYPLPPEGSRLVGQSFTVTVP
                     DHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPATVRKGIVVN
                     VAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYA
                     KRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKY
                     LFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLR
                     AFISGQEVDVNRANAALQRRSGMPVQISSGSRQMF"
     gene            complement(4091..5176)
                     /gene="cobT"
                     /locus_tag="JNZ57_003421"
     CDS             complement(4091..5176)
                     /gene="cobT"
                     /locus_tag="JNZ57_003421"
                     /EC_number="2.4.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide--dimethylbenzimidazole
                     phosphoribosyltransferase"
                     /protein_id="HAY8829516.1"
                     /translation="MQTLADLLNTIPAIDPAAMSRAQRHIDGLLKPVGSLGRLEALAI
                     QLAGMPGLNGIPHVGKKAVLVMCADHGVWEEGVAISPKEVTAIQAENMTRGTTGVCVL
                     AAQAGANVHVVDVGIDSAEPIPGLINMRVARGSGNIASAPAMSRRQAEKLLLDVICYT
                     RELAKNGVTLFGVGELGMANTTPAAAAAIVSTITGRDPEEVVGIGANLPTDKLANKID
                     VVRRAITLNQPNPQDGVDVLAKVGGFDLVGMAGVMLGAASCGLPVLLDGFLSYAAALA
                     ACQMSPAIKPYLIPSHLSAEKGARIALSHLGLEPYLNMEMRLGEGSGAALAMPIIEAA
                     CAIYNNMGELAASNIVLPGNTTSDLNS"
     gene            complement(5188..5931)
                     /gene="cobS"
                     /locus_tag="JNZ57_003422"
     CDS             complement(5188..5931)
                     /gene="cobS"
                     /locus_tag="JNZ57_003422"
                     /EC_number="2.7.8.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HAY8829517.1"
                     /translation="MSKLFWAMLSFITRLPVPRRWSQGLDFEHYSRGIITFPLIGLLL
                     GAISGLVFMVLQAWCGVPQAALFSVLVLALMTGGFHLDGLADTCDGVFSARSRDRMLE
                     IMRDSRLGTHGGLALIFVVLAKILVLSELALRGEPILASLAAACAVSRGTAALLMYRH
                     RYAREEGLGNVFIGKIDGRQTCVTLGLAAIFAAVLLPGMHGVAAMVVTMVAIFILGQL
                     LKRTLGGQTGDTLGAAIELGELVFLLALL"
     gene            complement(5928..6473)
                     /gene="cobU"
                     /locus_tag="JNZ57_003423"
     CDS             complement(5928..6473)
                     /gene="cobU"
                     /locus_tag="JNZ57_003423"
                     /EC_number="2.7.1.156"
                     /EC_number="2.7.7.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adenosylcobinamide
                     kinase/adenosylcobinamide-phosphate guanylyltransferase"
                     /protein_id="HAY8829518.1"
                     /translation="MMILVTGGARSGKSRHAEALIGDSSQVLYIATSQILDDEMAARI
                     EHHRQGRPEHWRTVERWQHLDELIHADINPNEVVLLECVTTMVTNLLFDYGGDKDPDE
                     WDYQAMEQAINAEIQSLIAACQRCPAKVVLVTNEVGMGIVPESRLARHFRDIAGRVNQ
                     QLAAAANEVWLVVSGIGVKIK"
BASE COUNT         1984 a         1878 c         1549 g         1792 t
ORIGIN      
        1 gtcagaagga aaagtagatg aatcaataca atggctgaag aaatcagcgg aacatggtaa
       61 taattacgca caatatcaga tgtcaaaata tttattaaaa ataggtgata ttagaggatc
      121 ggaatattat ctaaacttat ctgcggataa cggatgtgta tttgcaataa aagatattat
      181 caaaaatatg atggatagtg gaaagtacga tgacgccctc atttgggttg aaaaattgaa
      241 aaaattgtat cctgacacaa ataccgaact ttacatacaa aaaataacgc agaaaaaaaa
      301 gcaatccaaa taataattat atataattac tcgcacagag ttacagtatt gcaagaaata
      361 tatctagcat ataaagtcgc cgccagtaaa gataaagtac tgtgtaatcc ttcctcccat
      421 ataggggtaa aaacttagca tccagtgccc tcgacttaat ttttagtatt ttctctgtga
      481 agtgacactt cgtaggattc agttcatgtt taccagaaaa aaggtggtca atctggtggc
      541 cttgacaatc tcgatttttt gttttagctt tccaatcagc cagttaatgg ctacggcgat
      601 cccagtcaga ggagccaaat ttctgaaaag cccgctttta tagcgggctt tttgctatat
      661 ctgataatca atttcctctt cactgttttc catcacctgc cgcttgatat cctcaactga
      721 cagtcctgca ttacaaagtt ccagaaagcg ccagacatag ttacgctgaa gttgtcctcg
      781 cttcagtccc aaccagacag tattagcatc gaaaagatgc cgcgtatcca gacggattaa
      841 attctcttcc tcttgttcgc cgctggattg ttcggcaact aatccgatcc caagcccaag
      901 agcaacatag gttttaatga catcagaatc ctgcgcactt aatacaatat ctgccagcaa
      961 acctttgcgg gcaaatgcgt catcaatacg tgagcgcccc gtaatcccct gtcggtaagt
     1021 gattaacggc cacttcgcta ttgattccag cgtcaatggt gtaatttgcg ttaagggatg
     1081 atcgagtgga acaagcaaac tatggtgcca acgaaaccac gggaaggcga cgagctgcgg
     1141 gtcattactc aaacgctcgc tggcgatacc aatatcagct tcgccatttt gcaacaacgt
     1201 cgcaatttcc tgtggcgtcc cctggattag ctcgagccga acctccggga aaagttcgcg
     1261 aaaagcttta atgacctctg gcaagctata acgtgcctga gtatgcgtcg ttgcaatagt
     1321 gagaacgcca aacgtatcgt tggtaaacag gtctgcaagc cgacgaacat tactggcttc
     1381 attcagaata cgttctgcaa tgaccagtaa tgctttgccc ggttcagtca tgcccagcag
     1441 ccgcttacct cgtcgaacaa atatttcgat gccaagttca tcctccagtt cccgaatatg
     1501 acggctgacg ccggactgtg aggtaaaaag catattcgca acctctgtca ggttgtaatc
     1561 ctgacgtgca gcctcgcgga ttatctttag ttgttggaaa ttcacggtaa actccgggca
     1621 gttcagattt cccgttattg ttaaagtcta atgcccggca taacaaataa taaaaacccg
     1681 catcttattc catcccgata taacgcttag ctcaccaatt gccactgcct tttttccatc
     1741 actggggaac taatcactga cattaacaac tctttcactg cctgtgcctg tgcctgtgcc
     1801 tgtggcgata agttcgctct ggcgggtaaa tttaatgaca aagagagact catggaagga
     1861 gtggtaatgc gtgacatcca cccatttact gcgccacata acgaacgcgc ggccgattcg
     1921 ggtaatactg caacgcccat gccgcttgca atcgctgcgg taagcgtggc aatagactca
     1981 atttcaccaa tgacttttgc tgtgagtcgc cgtaaggaaa aagcctcatc aacacgaagt
     2041 ctaatagcac tgtaatcact ggggagaaag aggttcattt tcgcaatagc attcacatca
     2101 acgctttgcc ccgggcaatc ttgagttcct accagaaaaa gatcttcttt cagcaaagcc
     2161 tgactggata caccagccac aggggaatgc tcataaatca ccgccatatc gagttggtga
     2221 tttatcaatt tttcgttaag cactgcacca ctattttcat gaagatagat aacgatctcc
     2281 ggaaattcag cgcgaaccgc ctgtaataag ggcatggtga tggatgacgc agcggttcct
     2341 ggtgcaaagc caatcgagac ttgccccgat aatgcctgac caacgttatg caccgccagt
     2401 tgggcctgtt cacactgacg taaaatggcc cgcgcatggg tatagagaat ttttccggcg
     2461 tctgttggcg taacgccccg ctttgtacgg atcaaaagtt gttgatttaa ctcaccttcc
     2521 agtgtggcaa cctgctggct gagcgctggt tgtgcgatat gcaatacttc agcagcctgg
     2581 gtcaggctac caatatctac aatttttacg aagtatttca ggcgtctgaa gttcatgttg
     2641 cctccggttt ttaagaatcg gcccaagtgc cgccattact tacaaccaga ttgcaagatg
     2701 cttgccagtt ttattttggc gttgatgtac aagctaacca actgtcaaat aagagattat
     2761 gatagattcg tcatttgctc ctttaatcag ctgtcgcgtt cccctgccct ataaaaggag
     2821 ggtatgcacc acgatagttc attacccaat aagattgaaa gctcaccact ttgttgaaat
     2881 tgacagcaaa caaaccaaaa aatgcatttc accctttgac atcaccatgc actgccatta
     2941 atatgcgccc cgttcacacg attcctctgt agttcagtcg gtagaacggc ggactgttaa
     3001 tccgtatgtc actggttcga gtccagtcag aggagccaaa ttcaaaaaag cctgctttct
     3061 agcaggcttt ttgctttcta attaccaacg ctcttaaaac atctgtcttg aaccagaact
     3121 aatttgcaca ggcattcccg atcgacgttg caacgcagca tttgcgcgat ttacatcaac
     3181 ttcttgcccg ctgataaacg cccgcaaaga tggggttacc ggcaatggca cttttcggtc
     3241 agactcatat tctgcacgat tgcgcgacaa cggctcatga acttccagcc agttcgagcc
     3301 atctggttca gtggtgtatt ttactggctg gtcgataatt tgcacacgcg tcccaacagg
     3361 aacattatca aacagatatt tgatatcgtc attgcgcaga cgaatacagc cctgacttac
     3421 ccggagccca ataccaaaat tggcattggt accatggatg gcatacaacc tgccaatata
     3481 aatcgcgtac agccccatgg gattatcggg gcccgcagga acaaatgcgg gcaaactctc
     3541 ccctcgtttc gcatattcgc gccgagtgtt cggcgttggc gtccaggttg gagcttcttg
     3601 tttacgttca acggtagtca cccagttacg cggggtttct cgcccagcct ggccgatacc
     3661 aataggaaag acttccacag tattactgtc tggtgggtag taataaagac gcatctcagc
     3721 gacgttaacc acaatccctt tacgaacagt ggcgggcaaa atcagttgct gcggaatggt
     3781 gagttgcgag ccagacttcg gcaaaaaaac atcagcgccc gggttcgctt ccagcatgtt
     3841 acttaaccct tgcccgtatt gtgcggcaaa agtctccagc ggctgggtat tgtgatcagg
     3901 aacagttaca gtaaacgact gccccactaa acggctaccc tctggaggta atggataagt
     3961 taccgccagg ctagtatggc tggcaaaaag cagagcaaat gagcaaaaaa tatttacacg
     4021 acgcatcatg tccctttcct aagtcgcgaa agctatccgt taagtatagc ttttatcaga
     4081 cttttcgttt ttaactgttc aaatcagaag tcgtattccc cggtagaaca atattactgg
     4141 cagcaagttc gcccatgttg ttatatatcg cacaggcagc ttcgatgatg ggcatcgcca
     4201 gagctgcgcc actcccctca cctaaacgca tctccatatt gagataaggc tccagcccca
     4261 aatgcgacag cgcaatacgc gccccttttt ctgccgacag gtgagaagga atgagatacg
     4321 gtttgattgc aggagacatc tggcaggctg cgagcgcggc agcataagaa agaaatccat
     4381 ccagcaacac gggtaaaccg caggaagcag cgcctaacat cacgccagcc attccgacca
     4441 aatcaaatcc acccactttt gccaggacat caacgccatc ctgcggattt ggttgattca
     4501 acgtaatcgc ccggcgcaca acatcaattt tattagccag tttatctgtc ggcaggtttg
     4561 cgccaatccc aaccacttct tcaggatccc ggccagtgat tgtgctgact attgccgctg
     4621 ccgctgccgg tgtcgtgttt gccatcccca gttcacctac accaaacagc gtgacaccgt
     4681 tttttgccag ctcccgcgta taacatatga cgtccaaaag caacttttca gcctgacggc
     4741 gactcattgc cggagctgaa gcaatattgc cgctacctcg tgcgacacgc atgttgataa
     4801 gcccggggat aggctcagca ctatcaatac caacatcaac tacgtggacg ttagcgcccg
     4861 cttgtgctgc cagcacacac acgccggttg ttccgcgggt catattttca gcctgaatgg
     4921 ctgtcacttc ttttggggaa atagcgaccc cttcctccca gacgccgtga tcggcacaca
     4981 taaccagtac cgcttttttg cccacatgcg gtatgccatt caaccccggc attcccgcca
     5041 gttgtatggc aagcgcctcc agccttccca ggctaccaac aggtttgagt aacccgtcaa
     5101 tatgccgttg tgcacgcgac atagcggcag gatcgatagc agggatcgta ttcagtaaat
     5161 cggcaagtgt ttgcatgtca cgtctcttta tagcagtgcc agcaggaaga ccagttcacc
     5221 aagctctata gcagctccca gcgtatcgcc ggtttgcccg cccagcgtac gtttgagaag
     5281 ctgaccgagg atgaaaatcg ccaccatcgt taccaccata gcagccacac catgcatacc
     5341 cggcaataat acggcagcaa aaatagcggc taagccgagt gtgacgcagg tttgtcgccc
     5401 atcaattttg ccaatgaaca cattgccaag cccttcttcc cgcgcataac gatgacgata
     5461 catcaataat gcggcagtcc cgcggctgac cgcacatgct gccgccagcg atgcaaggat
     5521 cggttcgcca cgcagagcca actcgcttaa taccagaatc tttgccagta caacaaaaat
     5581 caatgccaga ccgccatggg tgcctaaacg gctatcacgc atgatttcca acatgcgatc
     5641 gcggctacgt gcagaaaata cgccatcaca ggtatcggcg aggccgtcca ggtggaatcc
     5701 cccggtcatc agcgccagca caagtacgct aaacagtgcc gcctgtggta cgccacacca
     5761 tgcctgcagc accatgaaga ccagcccgct aatcgcgcca agcaataatc caattaaagg
     5821 aaaagtaata ataccgcgag aataatgctc gaaatccagt ccctgggacc agcgacgcgg
     5881 tacaggcaga cgcgtaataa atgagagcat cgcccaaaat aatttactca tttgattttt
     5941 actccaatac ccgaaaccac cagccatact tcatttgccg cagcggccaa ctgctgattt
     6001 acccgcccgg caatatcacg aaaatgtcgt gccagacgac tctccggcac aatccccatt
     6061 cccacttcgt tagtcactaa tacaaccttt gcggggcaac gttggcaggc agcaatcaac
     6121 gactgaatct ctgcattaat cgcctgttcc atcgcctgat aatcccattc atcagggtct
     6181 ttatcgccgc cataatcaaa caacagatta gtcaccattg tggtaacgca ttccagcaac
     6241 acaacctcat tcgggttaat gtctgcatga attaattcat caagatgttg ccagcgctcc
     6301 actgtgcgcc agtgctccgg gcggccttgc cgatgatgtt ctatccgtgc agccatctca
     6361 tcatcaagga tttgcgaggt agcgatatac agaacctgtg aagagtcccc aataagcgcc
     6421 tctgcgtggc gactcttccc gctccgtgcg ccccccgtca ccaaaatcat cataccgact
     6481 cctgattcaa atgtatgatg gtattcattg aacagaacaa tggatccccc accgttgctg
     6541 accgcaaaac atttacgcga ttaatactgc gcgtaatata attaaaaatc cagcattctc
     6601 aatccattac gaaataagat ggcattacgg aatagccaga ctttctcgtg ttaacgtccg
     6661 acaaaatgtg tcattgacag cggtttctgt ggattgacac atttcattca gataatgaat
     6721 taatgctact gccggaccaa ccagcaaacg ggcattgtgt tctgaaatcc aggctattga
     6781 ttcaacgtca gcgacagatc tgcgctgtaa aagaacttgt aaaacaacgc aatagaatta
     6841 tccggaatgg tagcgactat gcactagaac accacaattt cgctctctcg gtaaggcact
     6901 gtcacagcat tcaacagaat gtgacttgcc agatttatta gcgccaccag atgtttaacc
     6961 gggtaaccac gacccagtcg gggatatatt ccatcttctc gctgacatca tcaagaataa
     7021 aaaggtttat cacactcaga gcaacgttct tcagcaggcg ggataattct tcaacattta
     7081 aaagatgtgt tattaaaggc atacaaactg gacgtattgt attttctttt ggtggttgac
     7141 ctaaggtagc agtttatcct gatgcgctga gatttctgta atatctacgt caacattctc
     7201 ctc
//
LOCUS       DADMHC010000194         7198 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.197, whole genome shotgun sequence.
ACCESSION   DADMHC010000194 DADMHC010000000
VERSION     DADMHC010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7198
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.197"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..259)
                     /locus_tag="JNZ57_003424"
     CDS             complement(<1..259)
                     /locus_tag="JNZ57_003424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000741720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HAY8829519.1"
                     /translation="MAAVILRKVEKIYDNGFKPVHGIDLDINDGEFMVFVGPSGCAKS
                     TTLRMIAGLEDVSGGEIYISDRLVNTLPPKDRSIAMVFQNYA"
     gene            complement(342..830)
                     /locus_tag="JNZ57_003425"
     CDS             complement(342..830)
                     /locus_tag="JNZ57_003425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001461083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosidase"
                     /protein_id="HAY8829520.1"
                     /translation="MKNKLLIAAVLTGLLSGCVDGNSPSGSQEGVVKADPRYSECNLP
                     DVNERGPIAAGLYISGTLPEGYWLMKPERKMHYKGDGIYQLIYSEKAGAVTMQFATMN
                     WNPQFTVTGLELPLNQAKTLKKGGMDKNTKVVIPADGKYVWTIQIGPDKKAIAAMVAP
                     CK"
     gene            complement(927..1883)
                     /locus_tag="JNZ57_003426"
     CDS             complement(927..1883)
                     /locus_tag="JNZ57_003426"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000490374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HAY8829521.1"
                     /translation="MFSALDIKTLMQGTLYGDPSLRVDTIRPIHSPLVGGLSIVMTPG
                     DLLHIPTTGADIIIGPEEIISSNTKAKIVVDYLNVNNLNKVLRYFKVHKYRLFEQENT
                     STIPDVYIGKHCQIGMNCHFMPGVKIMNCVTIGDNVAIHANTVIKEGTIIGNDVIIDS
                     NNSIGNYSFEYMSDERDSYVRVDSIGRVIIGDYVEIGCNNTIDRGTLGDTIIGQGTRI
                     DNQVQIGRDCIIGNKCLIVSQCGFSGHVVLGDHVITHGQVGIAGHISIGSYSVIKAKS
                     GVSHSCPEKSDLFGYPAKNTREYNKNLAVLNKLTKQHGVYKQ"
     gene            complement(1902..2939)
                     /locus_tag="JNZ57_003427"
                     /pseudo
     CDS             complement(1902..2939)
                     /locus_tag="JNZ57_003427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000242972.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
     gene            3211..4443
                     /locus_tag="JNZ57_003428"
     CDS             3211..4443
                     /locus_tag="JNZ57_003428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000777725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8829522.1"
                     /translation="MKLSNIVTVIILAISSTLTPQAMAEKLIPETDAELLVWSDATSV
                     EYMKYAAKEFNKDFGYKVKFTFRNIAPMDAASRIMQDGGTTRVADVAEIEHDTLGRLV
                     VAGGVMENMVSAERIKKTFIPGAVSAATYNNISYGFPVSFATLALFYNKDLLNTAPKT
                     FEEINTFSEKFNNSSEHKYALLWDVQNYYVSRMFITLYGANEFGKIGNDPKALGIASS
                     EAKKGLETMKRLKKANPSNPLDMGNPQVLRGLFNEGKVAAVIDGPWSIQGYIDSGINF
                     GVTRIPTLDGHQPRTFSTVRLAVVSSFTAYPHAAELFADYLTTDKMLMKRYEMTNLIP
                     PIDSLMNKISQTGSEAIKAIIAQANYSDAMPSIPEMSYLWSPMTNAILATWVENKTPD
                     EVLNHAQTIIEEQLSLQE"
     gene            4467..5735
                     /locus_tag="JNZ57_003429"
     CDS             4467..5735
                     /locus_tag="JNZ57_003429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001377483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HAY8829523.1"
                     /translation="MKSAPVLPISCLIMGGTQLSRHYYVKGGIFFAIQVCFLLYLSDI
                     VHTLIGLFTLGDVAQIRKGLTVIQGDNSIFMLVEGVIATIIVGLFATIYILNIKDARN
                     SSYCHLTFKQQLYKLYEDKFAFIVLTPAFLASIAFIVLPIVITVLVSFTNYAAPNHIP
                     PKNLVDWVGIKNFIMLFKFKIWSDTFLGVALWTFIWAICATVFTFSFGFILALALAKK
                     NIRFAKVWRLIFILPYAIPTFVTLLILRLLLNGIGPVNSFLNSIGMNSVDFLSVPLNA
                     KITVIAVCVWVGAPYFMLLIAGALTNISRDLYEASEVDGTTKWQQFKEITLPMVLHQV
                     ASTLVMTFAYNFNNFGAIYLLTEGGPTNPEYRFAGHTDIFITWIYKLTLNFQQYHIAS
                     VISIIIFIFLSVIAIWQFRRMKSFKDDVGM"
     gene            5738..6569
                     /locus_tag="JNZ57_003430"
                     /pseudo
     CDS             5738..6569
                     /locus_tag="JNZ57_003430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008076437.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
     gene            6587..>7198
                     /locus_tag="JNZ57_003431"
     CDS             6587..>7198
                     /locus_tag="JNZ57_003431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017791414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glycosidase"
                     /protein_id="HAY8829524.1"
                     /translation="MITVSSLKHSAKSEDSYAYDNETLYVRLRTLRGEVDKVILWIGD
                     PYNWAEGGLDGGNMAGTEAFGWIGGNEIEMEQEAVTEFHDHWFAVFKPQKRRCRYGFI
                     LFGKEGEKFLFGEKRCVDISSPECEERELSRLNNFFCFPYLNKIDVLNTPSWVKNTVW
                     YQIFPDRFCNGRPEISPEGVEPWGSTPTSFNFMGGDLWGVIDKL"
BASE COUNT         2074 a         1369 c         1412 g         2343 t
ORIGIN      
        1 gcgcatagtt ctggaacacc attgcaatgc tgcgatcttt aggcggaagg gtattaacaa
       61 ggcggtcgct aatgtaaatt tcaccacctg atacgtcttc aagacctgca atcatgcgta
      121 atgtagttga tttggcacac ccagatggtc caacaaaaac catgaattca ccatcgttta
      181 tatcgagatc aatgccgtga acaggtttga atccattgtc ataaattttt tcaactttgc
      241 gtagaattac cgcggccata atctgctctc attaacaaga attttggaat actgatactc
      301 cactattcaa cgaatgttga atagtggagt gctaaaaata actatttaca tggtgctacc
      361 atggcggcta ttgccttttt atcaggacca atttgaatcg tccaaacata ctttccatcg
      421 gcaggaatga cgacttttgt atttttatcc atgcctcctt tcttgagtgt tttagcctga
      481 tttaatggca attcaagacc tgttacagtg aactgcggat tccagttcat agtcgcaaat
      541 tgcattgtta ccgcacctgc tttttcagaa taaataagct gataaatacc atctccctta
      601 taatgcattt tacgctctgg cttcattaac caatagcctt ccgggagggt tccggaaatg
      661 taaagacccg cagcaattgg ccctctttca tttacatcag ggaggttaca ttctgaatag
      721 cgaggatccg ctttcacgac accttcctga ctgccagagg gtgaattgcc atcaacgcat
      781 cctgaaagaa gaccagtcaa cacagccgca ataagcaatt tatttttcat ttaaactctc
      841 aataaaagta gtatagctta gttaagctat ttctatgtca gtgttaatgt taatgttaat
      901 gtatataaat aatacttctc aacgactcac tgtttatata caccatgctg tttagttagt
      961 ttattaagga cagcgagatt tttgttgtat tctcgcgtat ttttggcagg gtaaccaaaa
     1021 aggtcactct tttcaggaca agaatggctt acacctgatt tagccttaat taccgaataa
     1081 ctaccaattg atatgtgacc ggcgattccg acttgaccat gtgtaataac atggtcgcct
     1141 aaaactacgt gtcctgaaaa accgcattgt gaaacaatca ggcatttatt accgattatg
     1201 cagtcacgtc caatctgcac ttgattatca atacgagtgc cttggcctat aatcgtatct
     1261 ccaagtgtcc ctcggtcaat ggtgttgtta caaccgattt caacataatc acctatgata
     1321 actctaccga tgctatcaac tcggacatat gaatcacgtt catccgacat atattcaaaa
     1381 ctataattac cgatggagtt attagaatct atgataacgt cattgccaat aatagtacct
     1441 tctttaatca ctgtattcgc atgaatggca acattatcac ctatggtcac acagttcata
     1501 attttaacac caggcataaa atggcagttc atacctatct ggcagtgttt accaatgtat
     1561 acatcaggta tcgttgaagt gttttcttgc tcaaacaaac gatacttatg taccttaaaa
     1621 tatcttaaaa ctttgttaag attattcacg ttcaggtaat cgactacaat ctttgcctta
     1681 gtattagaac taatgatctc ttccggtccg ataattatat ccgcaccagt cgttggtata
     1741 tgcaacaaat ctccaggtgt cataacaatc gagagtccac caactaaagg actatggatt
     1801 ggccgaatgg tatcaaccct gagtgatgga tcaccatata aagttccttg catcaacgtt
     1861 ttaatatcta gtgcgctgaa cataggtttc cctctgttta atcaaaagcg atagaaagca
     1921 tgaacataaa tattatcctg attgagcaca ttatattttt cttcatctct tggatcataa
     1981 aagtttttgt gctctttttc ccaggcatgt ttatattcaa tcttggctat ccagtcgtca
     2041 cctatgtttt gttcataacc tagagtggct tttcgaattg ttttgaaata ggttctgttt
     2101 gcattgtatt gcaaactatc tgcgttttct gttttcccgt gtccgaagcg ggtgcgtaga
     2161 tacagattac ctgcgttttc aaaagcatat ttgataattg gctcgtagta agtttcggta
     2221 taaatactac gatcatttat tttaccgtga ttaaattcat cgttatgctt tttctggtag
     2281 aaaaattcaa taccaaactc ccatgcacca aaacgtttat agggctgaaa tagtatactt
     2341 tgaccttctt cttcgcgtac gccccaggag ctcttatcat ttcgactgta taagtattca
     2401 acgtttgaat aaaaacctgc gttccagtca gagttaaagt acgtcaacgt agggcgaaaa
     2461 ctgttgtcaa cagttacagt atgcaagcct gtgacataag ggctatctat attaccgtcg
     2521 gtatacatca ggtcgtatac cagactgaag tcgaaaccgt taccaatagt gaacgttttg
     2581 tttagtgata tatagttttg cagacttgtt tcattttcgt gatagccttt ttcttcttgt
     2641 cggcgatcga tagacttaag gccatagatt gctgcaaatt gccaattagg ttggctgaaa
     2701 taggcctgga aaatctcgtg tgttttagta tattccttta ctgttttacc taaatagtta
     2761 tcagtgcttt tggtctcata ttaaaatgta gtaccaacat gtccattaaa gcccgcttgt
     2821 tcttctgacc agtcagtgtc ggaggtaaag ccgcgatcgt ttgccgcaaa ggctcctgtt
     2881 gagcctaaaa tgactgttgc aattgaagcc gataagacat tcttttttat taaaaccata
     2941 aatgagttcc ttccaaaata tcaatttaag atatgatttc tgttattcca tatagtcgta
     3001 cctcatgtac tcctaaacac tctgcggcaa taaaatattt ttttctcaac aaattactgc
     3061 aaatgggata tgcatcacta tttgcagtta ttcatcatta aaatcttatt tgacagttga
     3121 ttggccttga tttgtgttga taatggcgtg aatgcttatg tagtcgtaca tcatatacta
     3181 cttaaagatg ttattcatga ggtaaatata atgaagcttt caaatatcgt cacagttata
     3241 attcttgcaa tttccagtac gctaacaccc caggcgatgg cagaaaaatt aattcctgaa
     3301 actgatgctg agttgttagt ttggtctgat gccacaagcg tggaatatat gaaatatgca
     3361 gcaaaggaat tcaataaaga ttttggctac aaggtaaagt ttacatttcg caatatagcg
     3421 ccaatggatg cagcatcaag aattatgcag gatgggggta cgactcgtgt agctgatgta
     3481 gctgaaattg aacatgatac cctggggcgg ttagtcgttg ctggcggggt tatggaaaac
     3541 atggtctcag ctgagcggat taaaaaaaca tttattccag gcgcagtatc ggcagctaca
     3601 tataataaca tcagctatgg ttttcctgta agtttcgcaa cgctggcgct tttctataat
     3661 aaggatttgt taaacaccgc accaaaaaca ttcgaagaaa tcaatacttt cagtgaaaag
     3721 tttaataatt catccgagca taaatatgct ctgctatggg atgtacaaaa ttattatgtt
     3781 tcacgtatgt ttattacctt gtatggtgcc aacgaattcg gtaaaatcgg taacgatcct
     3841 aaagctctag gcatcgcttc atctgaagcg aagaaagggc tagagacgat gaaacgctta
     3901 aagaaagcga atccctctaa tcctcttgat atgggtaatc cacaagttct aagaggtctg
     3961 tttaatgaag gtaaagttgc tgctgtaatc gacggacctt ggtccataca aggttacatt
     4021 gacagcggaa tcaattttgg cgtgacacgc atcccaacat tagatggtca tcagcctcgc
     4081 acattttcaa cagtacggct ggccgttgta agctcattta ccgcatatcc tcatgccgct
     4141 gaattattcg ctgactacct gacaacggat aagatgttga tgaagcgtta tgaaatgacg
     4201 aatctcatcc caccaatcga ttcacttatg aacaaaatta gccagacagg tagtgaagct
     4261 ataaaagcaa ttattgctca agctaattat tctgacgcaa tgccatcaat accggaaatg
     4321 tcttatttat ggtctccaat gactaatgct attttggcta cctgggttga gaataaaaca
     4381 ccggatgaag ttttaaatca tgcacaaaca attattgaag aacaactttc gcttcaggag
     4441 taattgtgaa tacacaacaa ctgaaaatga agagtgcacc tgtgctacct atttcctgtt
     4501 tgattatggg cgggactcag ttatcacgtc attattatgt gaaaggcggg atattctttg
     4561 caatacaagt atgctttttg ctttatcttt ccgatattgt gcatacatta ataggtttgt
     4621 tcacattagg tgatgtcgcg caaattcgaa aagggctgac tgttattcag ggtgacaatt
     4681 ctatatttat gcttgtagag ggcgtgatag cgaccattat tgttggctta ttcgccacta
     4741 tttacatcct taatattaaa gatgcgcgga actcatctta ttgccatctg acttttaaac
     4801 aacagttata taagctctat gaggataaat ttgcatttat agtcctaacg cccgcatttt
     4861 tagcgagtat agcattcatt gttttaccta ttgtaattac agttcttgta tcgtttacaa
     4921 actatgctgc gccaaatcac atcccaccaa agaacctggt tgattgggtt gggattaaaa
     4981 atttcataat gttgtttaaa tttaaaatat ggtctgatac gtttctaggt gtcgctctct
     5041 ggacatttat ttgggcaatt tgcgcgacgg tttttacctt cagttttggc tttattctgg
     5101 ctttagcact ggctaaaaaa aatatacgtt tcgcaaaagt ctggcgattg atatttatac
     5161 tgccatatgc catacccaca tttgtaacgt tacttatttt gcgtcttctt ttaaatggaa
     5221 ttggtccggt taactcgttt ctgaacagta tcggaatgaa ttcagttgat tttctgtcgg
     5281 ttccattaaa tgcaaaaata acagtaattg ccgtttgtgt ttgggtaggg gcaccgtatt
     5341 ttatgctatt gatcgcgggt gcattaacaa acatatcccg agatttgtat gaggctagtg
     5401 aggtcgatgg cacaactaaa tggcaacagt ttaaggaaat tacattgcca atggtgttac
     5461 atcaggttgc gtcaactctg gtaatgacat ttgcatataa tttcaataat tttggtgcaa
     5521 tttatcttct gactgaaggt ggtccgacta atccggaata cagattcgct gggcataccg
     5581 atatttttat tacctggatt tataaactca cattgaattt ccagcaatat catatagctt
     5641 ctgtaatctc catcataata tttatcttct tatcggttat agcaatatgg caattcagac
     5701 ggatgaaatc atttaaagat gatgtaggga tgtgacaatg gataaatttt tacgtaaaat
     5761 atcaacgctc ttagtttatc tttttttaat ctgcaactct attcttgtgc ttgggccagt
     5821 gatatggacg ataatggcat cttttaaaaa gggaataatc tatttagttc aacatttagt
     5881 ggcatcgagt ttacatttga ccactacata acgttgttca cggatacgcc atatatgcag
     5941 tggtatttga acactttcat tcttgctacc gctaacatgt taatttcact gttcgttgtg
     6001 acgatgaccg cctacgtttt ttcaaggtat cgatttcgtg gaaagcgtaa tacgttaatg
     6061 agtattcttg tattgcaaat gtttcctgca ttttatcaat gactgccatt tatatcctgc
     6121 tatcaaaggc caatttgata gacacatata ctgggttgct tctggtttat gtaaccggtt
     6181 cattgccctt catgacgtgg ttggtaaaag gttattttga tgctattcca acttctttgg
     6241 atgaggccga taaaatagat ggagcagggc atctgactat ttttattcag ataatattgc
     6301 cattggctaa gccgattctc gttttcattg gattagtttc gttcactgga ccatggatgg
     6361 acttcatttt gccaacgttg gtgcttcgta gtgaggataa aatgaccctg gcgattggca
     6421 tttttagttg gattgcttct aattcagcag agaattatac gctttttgct gctggggcgc
     6481 ttttagttgc agtacctatc acattgttat ttgtattcac acagaagcat ataactactg
     6541 gacttgttag cggtgccgtt aaggaataat ttagggatta gtatttatga ttacagttag
     6601 ttcgttaaaa cactcagcaa aaagtgaaga tagctatgcc tatgataacg aaactttgta
     6661 tgtacggtta cgcacattaa gaggagaagt tgataaagtt attctctgga taggcgatcc
     6721 atataattgg gctgaaggtg gtcttgacgg cggtaacatg gccgggacag aagcgttcgg
     6781 ctggattggc ggcaacgaga tcgagatgga acaagaagct gtcaccgaat ttcatgatca
     6841 ctggtttgca gtgttcaaac ctcaaaaacg ccgttgccgt tacggtttta tactttttgg
     6901 gaaagaggga gagaagtttc tttttggtga gaaaaggtgt gttgatatca gttcaccgga
     6961 gtgcgaagaa cgagagttaa gccgcttaaa taactttttt tgcttccctt atcttaataa
     7021 aattgacgtt ctaaataccc cctcctgggt aaaaaatacg gtatggtacc aaatttttcc
     7081 agaccgtttc tgtaacggca gacctgaaat atccccagaa ggggtagaac cgtggggcag
     7141 tacaccgact tcattcaact ttatgggtgg ggatctgtgg ggggttattg ataaactc
//
LOCUS       DADMHC010000195         7034 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.198, whole genome shotgun sequence.
ACCESSION   DADMHC010000195 DADMHC010000000
VERSION     DADMHC010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7034)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7034)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7034
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.198"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..1324)
                     /gene="astB"
                     /locus_tag="JNZ57_003432"
     CDS             complement(<1..1324)
                     /gene="astB"
                     /locus_tag="JNZ57_003432"
                     /EC_number="3.5.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-succinylarginine dihydrolase"
                     /protein_id="HAY8829525.1"
                     /translation="MNAWEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRLAAKQ
                     GLLKMKTLADAGFPQAVIPPHERPFIPVLRQLGFSGSDEQVLEKVARQAPHWLSSVSS
                     ASPMWVANAATIAPSADTLDGKVHLTVANLNNKFHRSLEAPVTESLLKAIFNDEEKFS
                     VHSALPQVALLGDEGAANHNRLGGHYGEPGMQLFVYGREEGNDTRPSRYPARQTREAS
                     EAVARLNQVNPQQVIFAQQNPDVIDQGVFHNDVIAVSNRQVLFCHQQAFARQSQLLAN
                     LRARVNGFMAIEVPATQVSVSDAVSTYLFNSQLLSRDDGSMMLVLPQECREHAGVWGY
                     LNELLAADNPISELKVFDLRESMANGGGPACLRLRVVLTEEERRAVNPAVMMNDTLFN
                     ALNDWVDRYYRDRLTAADLADPQLLREGREALDVLSQLLNLGSVYPFQR"
     gene            complement(1321..2799)
                     /gene="astD"
                     /locus_tag="JNZ57_003433"
     CDS             complement(1321..2799)
                     /gene="astD"
                     /locus_tag="JNZ57_003433"
                     /EC_number="1.2.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate-semialdehyde dehydrogenase"
                     /protein_id="HAY8829526.1"
                     /translation="MTLWINGDWITGQGASRVKRNPVSGEVLWQGNDADAAQVEQACR
                     AARAAFPRWARLSLAERQVVVERFAGLLESNKAELTAIIARETGKPRWEAATEVTAMI
                     NKIAISIKAYHVRTGEQRSEMPDGAASLRHRPHGVLAVFGPYNFPGHLPNGHIVPALL
                     AGNTIIFKPSELTPWSGEAVMRLWQQAGLPPGVLNLVQGGRETGQALSALEDLDGLLF
                     TGRANTGYQLHRQLSGQPEKILALEMGGNNPLIIDEVADIDAAVHLTIQSAFVTAGQR
                     CTCARRLLLKSGAQGDAFLARLVAVSQRLTPGNWDDEPQPFIGGLISEQAAQQVVTAW
                     QQLEAMGGRTLLAPRLLQSETSLLTPGIIEMTGVAGVPDEEVFGPLLRVWRYDSFEEA
                     ILMANNTRFGLSCGLVSPEREKFDQLLLEARAGIVNWNKPLTGAASTAPFGGIGASGN
                     HRPSAWYAADYCAWPMASLESDSLTLPATLNPGLDFSDEVVR"
     gene            complement(2796..3830)
                     /gene="astA"
                     /locus_tag="JNZ57_003434"
     CDS             complement(2796..3830)
                     /gene="astA"
                     /locus_tag="JNZ57_003434"
                     /EC_number="2.3.1.109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine N-succinyltransferase"
                     /protein_id="HAY8829527.1"
                     /translation="MMVIRPVERSDVSALMQLASKTGGGLTSLPANEATLSARIERAI
                     KTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAVGLNDPWHNYRVGTLVHASKELN
                     VYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKFNDKVV
                     AEMRGVIDEHGYSPFWQSLGKRFFSMDFSRADFLCGTGQKAFIAELMPKHPIYTHFLS
                     QEAQDVIGQVHPQTAPARAVLEKEGFRYRNYIDIFDGGPTLECDIDRVRAIRKSRLVE
                     VAEGQPAQGDFPACLVANENYHHFRVVLARTDPATERLILTAAQLDALKCHAGERVRL
                     VRLCAVEKTA"
     gene            complement(3827..5047)
                     /gene="astC"
                     /locus_tag="JNZ57_003435"
     CDS             complement(3827..5047)
                     /gene="astC"
                     /locus_tag="JNZ57_003435"
                     /EC_number="2.6.1.11"
                     /EC_number="2.6.1.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylornithine/acetylornithine transaminase"
                     /protein_id="HAY8829528.1"
                     /translation="MSQPITRENFDEWMIPVYAPAPFIPVRGEGSRLWDQQGKEYIDF
                     AGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFC
                     NSGAEANEAALKLARKFAHDRYGSHKSGIMAFKNAFHGRTLFTVSAGGQPAYSQDFAP
                     LPPDIRHAAYNDINSASALIDDATCAVIVEPIQGEGGVVPASNAFLQGLRELCDRHNA
                     LLIFDEVQTGVGRTGELYAYMHYGVTPDLLTTAKALGGDFPVGALLTTEECASVMTVG
                     THGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRG
                     LGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAGGNVVRFAPALNVSEEEVTTGLDR
                     FAAACEHFVSRGSS"
     gene            5493..6299
                     /gene="xthA"
                     /locus_tag="JNZ57_003436"
     CDS             5493..6299
                     /gene="xthA"
                     /locus_tag="JNZ57_003436"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HAY8829529.1"
                     /translation="MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPL
                     EEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGN
                     VTVINGYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLD
                     IGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSK
                     GFDDNRGLRIDLLLASQPLAECCVETGIDYEIRSMEKPSDHAPVWATFRR"
     gene            6466..>7034
                     /locus_tag="JNZ57_003437"
     CDS             6466..>7034
                     /locus_tag="JNZ57_003437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310483.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HAY8829530.1"
                     /translation="MNAERKFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSG
                     LFGYSLYILLFIIATLFLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARW
                     LGRDLLLKYVGHSHTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTIAFWP
                     YTLISALTTLPGIVIYTVMASDLANEGITL"
BASE COUNT         1653 a         2012 c         1766 g         1603 t
ORIGIN      
        1 cgcgctggaa cggataaacc gaaccgagat tcagtaattg gctcaataca tccagtgctt
       61 cccgcccttc gcgcagcaat tgcgggtcgg ccagatcggc agcagtaaga cgatcgcggt
      121 agtaacgatc cacccagtca ttgagcgcat taaacaaggt atcgttcatc atcaccgccg
      181 gatttaccgc ccggcgttct tcttctgtca ataccacccg caaccgcagg cacgccgggc
      241 cgccgccatt cgccatgctt tcacgtaagt caaagacttt tagttcgcta atcgggttgt
      301 cagcggcaag gagttcattg agataacccc atactccggc gtgttcccga cactcctgag
      361 gcagcaccaa catcatggaa ccatcatcgc ggctcaacag ttggctgtta aacagatagg
      421 tagacaccgc atccgacacg gaaacctgag ttgccggaac ttctatcgcc ataaaaccgt
      481 tcacccgcgc ccgcaggttt gccagtaact gtgactggcg agcgaacgcc tgttggtggc
      541 aaaacagcac ctggcggtta cttacggcaa tcacgtcatt atgaaaaaca ccctggtcga
      601 taacgtccgg gttttgctgg gcgaaaatca cctgttgggg attcacctga ttaagccttg
      661 ccaccgcctc gctggcttcg cgagtctgtc gcgccggata acgggaaggc cgggtatcat
      721 tgccttcttc tcgcccgtag acaaaaagtt gcatacccgg ctcaccgtaa tgaccgccga
      781 gacgattgtg gtttgccgcc ccctcatcac cgagcaacgc tacctgcggc aacgccgaat
      841 ggacgctaaa tttctcttcg tcgttaaaaa tagcttttaa cagcgattca gtgacgggcg
      901 cttccagcga acggtgaaat ttattgttca ggttggcaac ggtgagatgc actttgccat
      961 ccagcgtatc ggcagatggc gcgatcgttg ccgcattggc tacccacatt ggcgaagcgg
     1021 agctgacgct ggaaagccag tgcggtgcct ggcgtgcaac tttttccagt acctgctcat
     1081 cgctaccact gaatcccaac tgacgcagca ccggaataaa cggacgctcg tgcggcggga
     1141 tcacggcctg ggggaatccc gcatcggcaa gggttttcat tttcagtaag ccctgtttcg
     1201 ccgccagtcg cgggttagac acctgaaaac ggtgacgggt agaggcttca ttaccaaacg
     1261 acaggccagc gtaatgatgc gtcagcccta ccagcccgtc gaaattaact tcccaggcgt
     1321 tcatcgcacc acctcatcgg aaaaatccag cccggggtta agcgttgcgg gcaaagttaa
     1381 cgagtccgac tccaggctcg ccataggcca tgcgcagtaa tctgcggcat accaggcgct
     1441 ggggcgatgg ttaccggatg caccaatgcc gccgaatggc gcggtactgg cagcaccagt
     1501 aagcggtttg ttccagttaa caatccccgc ccgcgcctcc agcaacagtt gatcgaattt
     1561 ttcccgctcg ggggaaacca gaccgcaaga gagtccgaag cgagtgttat tcgccattag
     1621 aatcgcttcc tcgaaagaat cataacgcca gacgcgcaat aacggtccga acacctcttc
     1681 atctggtacg ccagcaacgc ctgtcatttc aatgatcccc ggcgtcagca acgatgtctc
     1741 tgattgtaat aagcgcggcg caagcagggt tcgtccgccc atcgcttcca gttgctgcca
     1801 ggcagtaacc acctgctgtg cggcctgttc agaaatcagc ccgccaataa acggctgcgg
     1861 ttcgtcatcc cagttgcccg gcgttaatcg ctggctgacg gcaaccagac gagcaagaaa
     1921 cgcatcgccc tgcgctccgc ttttgagcaa taaacggcgg gcgcaggtgc agcgttgccc
     1981 ggctgtgaca aacgccgact gaatggtcag atggacagcc gcgtcgatat ccgccacctc
     2041 atcgataatt agcggattat taccgcccat ctcaagggcg agaattttct ccggctgacc
     2101 ggagagctgg cgatgcagct ggtagccggt attggcgcga ccggtaaaca gcaaaccgtc
     2161 gagatcctcc agcgcactca gcgcctgacc cgtttcacgc ccgccctgca ccaggttcag
     2221 cacgcccggc ggcaagccag cctgctgcca taaacgcatt accgcttcgc cactccacgg
     2281 tgtcagttcg ctgggtttaa agataatggt gttacctgcc agcaatgccg gaacgatatg
     2341 tccgttcggc aaatgaccag ggaaattata cggcccaaac accgccagca cgccgtgcgg
     2401 gcgatgtcgc aggctcgccg caccgtccgg catttcacta cgctgctcgc cggtacgaac
     2461 gtgatacgcc ttaattgata tcgcgatttt attgatcatc gccgtcactt cggttgccgc
     2521 ttcccagcgc ggcttacccg tttctctggc aataatcgcg gttaattcgg ctttattgct
     2581 ttccagcaat ccggcaaagc gttcgacaac gacctgacgt tcagccaatg agagccgcgc
     2641 ccagcgcgga aacgccgcac gggctgcccg acaagcctgt tcgacctgag cggcatcggc
     2701 atcattgcct tgccataaca cctcgcccga taccggatta cgcttcacac gcgatgcgcc
     2761 ctggcccgtt atccagtcac cgttaatcca taaagtcatg ctgttttctc cactgcgcac
     2821 aggcgcacca gacgaacgcg ctcccctgcg tggcatttga gggcatccag ttgtgcggcg
     2881 gttaaaatca aacgctcggt tgccggatcg gtacgcgcca gcaccacgcg gaaatggtga
     2941 taattttcat tggcgaccag gcaggccgga aaatcgccct gcgcaggctg cccttctgcc
     3001 acttccacca gccgactttt acggatggcg cgcacgcggt cgatgtcaca ctcaagcgtt
     3061 ggcccgccgt cgaagatgtc gatatagttg cggtaacgaa aaccttcttt ctccagcacc
     3121 gcgcgggcag gcgcggtttg cggatgtacc tgaccgatga cgtcctgggc ttcctgggat
     3181 aaaaagtggg tatagatcgg atgtttcggc atcagttctg caataaatgc cttttgcccg
     3241 gtgccgcaga gaaaatcggc gcggctaaaa tccatcgaaa agaagcgttt accgaggctt
     3301 tgccagaacg gtgaatagcc gtgttcgtca atcaccccgc gcatttcagc aaccactttg
     3361 tcattaaact tgtcgcgaaa agccgccata aacataaagc gcgatttcga cagcaaatag
     3421 ccgttgccct ctttgcgcca gtccgggtcg agaaacagcg tgcacagctc gctgctgccg
     3481 gtgtgatcgt tactaagaaa cagcgtcggc aatgcgttat agacattcag ctcttttgag
     3541 gcgtgaacca acgtgccgac ccgatagttg tgccagggat cgttcagccc aaccgccacc
     3601 tcaatggcgc aaatccccgc cacggtgcct gtctcgctat cttccagcac gaacacatag
     3661 ccctgctcgc ttttgggcag ttcgccttgc caggttttga ttgccctttc gatacgcgcg
     3721 gaaagcgtgg cttcattagc gggaagcgac gtcaggccgc cgcccgtttt gctggcaagc
     3781 tgcatcagcg ccgagacatc tgagcgctca acgggacgga tgaccatcat gatgaacctc
     3841 ggctaacaaa gtgttcgcaa gcagctgcaa agcgatccag tccggtcgtc acctcttctt
     3901 cgctgacatt gagcgcaggc gcaaaacgca ccacgttgcc acccgcaatc agtaccataa
     3961 cgcctgcttt cgccgcctcc tgagagatct gtttcgcttg tccggcgtaa tcggcattca
     4021 gtacacagcc aatcaacaaa cctaagccgc gaacttcact gaacaaaccg tagcggtgat
     4081 taatggtatt aagacgctca acaaaccagt cgtgacgctg tttaacgcca ttaagcatct
     4141 ctggtgtgtt gatgagctcc agcactttgc ccgccaccgc cgaggccagc ggattgccgc
     4201 cataggtggt gccatgagtg ccaacggtca tcacgctggc gcactcttcg gttgttaaca
     4261 acgcaccgac cgggaaatcg ccgcccagcg ctttggcggt agttaacaga tcaggtgtca
     4321 cgccgtagtg catataggca tacagttccc cggtgcgccc gacgccggtt tgtacttcat
     4381 caaaaatcaa cagcgcattg tggcggtcac acaattcacg cagaccttgt aaaaacgcgt
     4441 tgctggctgg caccacaccg ccttccccct ggatgggttc gacaatcacc gcacaggtgg
     4501 cgtcgtcaat cagcgcgctg gcagagttaa tatcgttata tgcagcatga cggatatctg
     4561 gtggcagtgg cgcaaaatcc tgtgaatagg ctggctgccc acccgcactg acagtaaaca
     4621 gcgtgcgacc atgaaacgca tttttaaacg ccatgatacc gctcttatgg ctgccgtagc
     4681 ggtcgtgagc gaatttacgc gccagtttta gcgccgcttc gttggcttcc gcaccggagt
     4741 tacaaaagaa gacgcgatcg gcaaacgtgg cgtcgatcaa ttttttcgcc agtcgcagta
     4801 ccggctcgtt ggtgtaaccg ttgccggtat gccagaactt actcgcctgt tcgttcagcg
     4861 cttcacgcag ttccggatgc gcatggccca gcgcgttcac cgcaatgcca cccgcgaagt
     4921 cgatatactc tttcccctgc tgatcccaca agcgcgaacc ttcgccacgt accggtataa
     4981 agggtgccgg agcgtaaaca ggtatcatcc attcatcaaa gttttcacgc gtaattggct
     5041 gagacatagc gacctctaca gtaaataatt cgttatttat atgttgacaa taagtaatgt
     5101 ttgcgctgta aatgtagatt gcagggttcg tgccagccag tgataaaagt gcataaacgg
     5161 cggaggctaa ctggaaatca aggagttata accaaaccat atgcatttaa agtgcatata
     5221 aagtgaatac gtttgcgatg tgggtgaata aaaagaataa aaaacgcaat gttatgcaga
     5281 agtaaaatat aattctggaa ttgtgatcat tgacgaaatt tactggaaat tactgcgcca
     5341 ttctgacgca gcgcgcacca aaagcgggca ttttttgcgc catcgttgac atcattaaca
     5401 accatcgatc aaatcactta acaacaggcg gtaagcaacg cgaaattctg ctaccatcca
     5461 cgcactcttt atctgaataa atggcagcga ctatgaaatt tgtctctttt aatatcaacg
     5521 gcctgcgcgc cagacctcac cagcttgaag ccatcgtcga aaagcaccaa ccggatgtga
     5581 ttggcctgca ggagacaaaa gttcatgacg atatgtttcc gctcgaagag gtggcgaagc
     5641 tcggctacaa cgtgttttat cacgggcaga aaggccatta tggcgtggcg ctgctgacca
     5701 aagagacgcc gattgccgtg cgtcgcggct ttcccggtga cgacgaagag gcgcagcggc
     5761 ggattattat ggcggaaatc ccctcactgc tgggtaatgt caccgtgatc aacggttact
     5821 tcccgcaggg tgaaagccgc gaccatccga taaaattccc ggcaaaagcg cagttttatc
     5881 agaatctgca aaactacctg gaaaccgaac tcaaacgtga taatccggta ctgattatgg
     5941 gcgatatgaa tatcagccct acagatctgg atatcggcat tggcgaagaa aaccgtaagc
     6001 gctggctgcg taccggtaaa tgctctttcc tgccggaaga gcgcgaatgg atggacaggc
     6061 tgatgagctg ggggttggtc gataccttcc gccatgctaa tccgcaaaca gcagatcgtt
     6121 tctcatggtt tgattaccgc tcaaaaggtt ttgacgataa ccgtggtctg cgcatcgacc
     6181 tgctgctcgc cagccaaccg ctggcagaat gttgcgtaga aaccggcatc gactatgaaa
     6241 ttcgcagcat ggaaaaaccg tccgatcacg cccccgtctg ggcgaccttc cgccgctaat
     6301 ttagcagctc tcctggctca aactgggtca ggagaattaa ccttgagaaa aatcaacaaa
     6361 ctgtcagtaa tgatttgttg cctgccgtcc tttgttatac cgtcactgcg tttttagttg
     6421 tctgaccact tctctattat caagtttgat ataggaaact ccacgatgaa tgctgagcgt
     6481 aaatttcttt tcgcctgtct tatttttgcg ctggtcattt acgctatcca cgctttcggt
     6541 ttattcgatc tgctcaccga tttaccccac ttacagacac tcattcgcca gagcggattg
     6601 ttcggttata gcctctatat tctgttattc atcattgcca ccctctttct gttaccagga
     6661 agcatactgg tgatcgctgg aggaatagtt tttggcccgc tcttagggac actactctca
     6721 ttaattgccg ccacgctggc ctcctcgtgc tcattcctgc tggcgcggtg gctgggacgt
     6781 gatttactgc tgaaatacgt gggccatagc cataccttcc aggccattga aaaaggcatt
     6841 gcgcgtaacg gtattgattt tcttattctg acccgcttaa tcccgttgtt tccttacaat
     6901 attcaaaatt acgcttacgg attaaccacc atcgccttct ggccttatac ccttatttcg
     6961 gcactcacga ccctgcccgg tattgttatt tataccgtga tggcaagcga tctcgccaat
     7021 gaaggcatta cgct
//
LOCUS       DADMHC010000196         7030 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.199, whole genome shotgun sequence.
ACCESSION   DADMHC010000196 DADMHC010000000
VERSION     DADMHC010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7030)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7030)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7030
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.199"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..642)
                     /gene="tauD"
                     /locus_tag="JNZ57_003438"
     CDS             complement(<1..642)
                     /gene="tauD"
                     /locus_tag="JNZ57_003438"
                     /EC_number="1.14.11.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine dioxygenase"
                     /protein_id="HAY8829531.1"
                     /translation="MSERLSITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQV
                     VFLRDQAITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDV
                     TFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFP
                     EYKYRKTEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVS"
     gene            complement(639..1466)
                     /gene="tauC"
                     /locus_tag="JNZ57_003439"
     CDS             complement(639..1466)
                     /gene="tauC"
                     /locus_tag="JNZ57_003439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter permease TauC"
                     /protein_id="HAY8829532.1"
                     /translation="MSVLINEKLHSRRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAAL
                     QLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVVIGIPVG
                     IAMGLSPTVRGILDPVIELYRPVSPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMS
                     ALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAE
                     LIAATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRALQRRLTPWHGEVQ"
     gene            complement(1463..2230)
                     /gene="tauB"
                     /locus_tag="JNZ57_003440"
     CDS             complement(1463..2230)
                     /gene="tauB"
                     /locus_tag="JNZ57_003440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter ATP-binding subunit"
                     /protein_id="HAY8829533.1"
                     /translation="MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLL
                     NLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGIEK
                     IQRLEIAHQVLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALD
                     AFTRDQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSSGPGRVLERLPLNFA
                     RRFVAGESSRSIKSDPQFIAMREYVLSRVFEQREAFS"
     gene            complement(2243..3205)
                     /gene="tauA"
                     /locus_tag="JNZ57_003441"
     CDS             complement(2243..3205)
                     /gene="tauA"
                     /locus_tag="JNZ57_003441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414899.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8829534.1"
                     /translation="MAISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQADNT
                     FAKESGASVDWRKFDSGASIVRALASGDVQIGNLGSSPLAVAANQQVPIEVFLLASKL
                     GNSEALVVKKTISKPEDLIGKRIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPA
                     IIAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSEQVGQWGAPTLDVWVVCKDFAEKHP
                     EVVKAFAKSAIDAQQPYIANPDAWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQ
                     QQTAELTGPVNKVIIDTAQFLKEQGKVPAVANDYSQYVTSRFVQ"
     gene            3821..4492
                     /locus_tag="JNZ57_003442"
     CDS             3821..4492
                     /locus_tag="JNZ57_003442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016241930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HAY8829535.1"
                     /translation="MDKVLDSALLSSANKRKGILAIGAHPDDIELGCGASLARLAQKG
                     IYIAAVVMTTGNSGTDGIIDRHEESRNAPKILGCHQTIHLNFADTRAHLQLNDMISAL
                     EDIIKNQIPSDVEIMRVYTMHDADRHQDHLAVYQASMVACRTIPQILGYETSSTWLSF
                     MPQVFESVKEEYFTVKLAALKKHKSQERRDYMRHDRLRAVAQFRGQQVNSDLGEGFVI
                     HKMIL"
     gene            4502..5651
                     /locus_tag="JNZ57_003443"
                     /pseudo
     CDS             4502..5651
                     /locus_tag="JNZ57_003443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414897.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
     gene            5629..6210
                     /locus_tag="JNZ57_003444"
     CDS             5629..6210
                     /locus_tag="JNZ57_003444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012602184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HAY8829536.1"
                     /translation="MKNYLKLNVKEKNIQIADQVIIDETAGEVVIGANTRICHGAVIQ
                     GPVVIGANCLIGNYAFIRPGTIISNGVKIGFATEIKNAVIEAEATIGPQCFIADSVVA
                     NQAYLGAQVRTSNHRLDEQPVSVRTPEGIIATGCDKLGCYIGQRSRLGVQVIILPGRI
                     ISPNTQLGPRVIVERNLPTGTYSLRQELIRTGD"
     gene            6212..6985
                     /gene="yaiO"
                     /locus_tag="JNZ57_003445"
     CDS             6212..6985
                     /gene="yaiO"
                     /locus_tag="JNZ57_003445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiO family outer membrane beta-barrel protein"
                     /protein_id="HAY8829537.1"
                     /translation="MIKRTLLAAAIFSALPAYAGLTSITAGYDFTDYSGDHGNRNLAY
                     AELVAKVENATLLFNLSQGRRDYETEHFNATRGQGAVWYKWNNWLTTRTGIAFADNTP
                     VFARQDFRQDINLALLPKTLFTTGYRYTKYYDDVEVDAWQGGVSLYTGPVITSYRYTH
                     YDSSDAGGSYSNMISVRLNDPRGTGYTQLWLSRGTGAYTYDWTPETRYGSMKSVSLQR
                     IQPLTEQLNLGLTAGKVWYDTPTDDYNGLQLAAHLTWKF"
BASE COUNT         1736 a         1844 c         1683 g         1767 t
ORIGIN      
        1 gctgacatcg acaattcgcg tagtaaagcc ttcattcaca aacagcgcct gtttaccgct
       61 caccggatgc gttcgcacca ccggatgtag caacggagga tttttcgcga ccgcctcgcg
      121 ccagcgttga tgttcctcct cggttttgcg gtatttgtat tccgggaacg atttacggaa
      181 atcatgctcc gcacgcagcc cgctcagcag ctggcggaag ggaacagaga gcgcctcata
      241 ggccgcaata ccgctggtcc agagcgtatc accgccggtc gaaggtaatt ctttagctgc
      301 cagaatcgcc cctgcgggtg gcgtttcaat aaatgtcaca tcggtatgcc agttgtcgtt
      361 atctggcgga ttatcgttat gggtatccag cacgatgatc tcgtcaaccc cttcggcatg
      421 agggtaaaca gggtgaatat gcagttcgcc aaaacgctgg gccagcgcgc gttgctgctg
      481 cggcgtaatg gcttgatcgc gcagaaacac cacctgatgg cgcagcaccg catggtaaag
      541 ctgttcaaac tgattatcgc ttaacgggcg cgtcaggtcg gcacccgaaa tttgtgcgcc
      601 gatatacggc cccagcgggg taatgctcag acgttcactc attgtacttc tccatgccag
      661 ggcgtcagac ggcgctgtaa cgcgcgcaaa cccagttcta aaagaaaggc gataatcgca
      721 atcaccgcga ttcccgccag caccacgtca gtcgcgagaa attcacccgc tgactgaacc
      781 ataaatccta aaccgcgcgt cgcggcaatc agctccgccg ctaccagcgt agaccagccc
      841 acacccagac caatgcgtaa tccggtgagg atttccggca gcgcgccggg caaaatgaca
      901 aaccacagca cctgcgcacg gctggcaccc agcgactggg cggcacgaat gcgaacctgc
      961 tgcgcgcttt tcacccccgc cagcgccgac atcgccaccg gtgcaaaaat cgctaaatag
     1021 atcagtaaga tcttcgaggt ttcaccaata ccaaaccaga tcaccatcag cggcaaataa
     1081 gccagcggcg acaccggacg ataaagttcg attaccggat ccagaatgcc gcgcaccgtc
     1141 gggcttagcc ccatggcgat cccgaccgga ataccgatca ccaccgccgc gagtagcgcc
     1201 agcacaatgc gcgtcaggct ggctgccaga tgctgccaca gcgtggcgtc cataaatccc
     1261 tgcggtccgg caatggtgag cagttttgcc agtacttgtt gcggcggcgg caaaaacagc
     1321 gggctaatca gttgcagcgc cgccaccgtc caccatacag tgagtaaaac cgctaacgtg
     1381 ccaatgctta aagtcacctg acgcgagagc ggccagcgcc atttcagccg ccgcgaatgc
     1441 agtttttcat taatgagcac actcatgaga acgcctcccg ttgctcaaat acgcggctta
     1501 aaacatattc gcgcatggcg atgaattgtg gatcggactt gatgctgcgg ctcgactctc
     1561 ccgcaacaaa gcggcgagca aagttgagcg gcagccgctc cagcacacgg ccagggccgg
     1621 atgaaagcag aaccagttca gtcgccataa acaccgcttc ttctatatcg tgggtaatca
     1681 acagcacctg cttgcccgtc tcctgccaga gtttcagcag cagagtttgc atctggtcgc
     1741 gggtgaaggc gtccagcgca ccaaacggtt cgtcgagtaa taacagctgg ggattcgccg
     1801 ccagcgcgcg ggcaatcccc acccgctgac gttgaccacc ggaaagctgc cagatatagc
     1861 gtttttctgc gccttccagc cccacttttt tcagcacctg gtgcgcgatt tccagtcgct
     1921 gtattttctc tatacctgcc aattgcaggc caaacgccac gttgtcctgt acattgcgcc
     1981 acggtagcag cccttcattc tgaaaaacca ccccgcgctc tgctcccggt ccctcaatac
     2041 gcttacccgc cagttgaatg ctgccatgct gataaggcac aaaaccggca atcagattca
     2101 gcaacgtggt tttaccgcag ccggacggcc ccagcaccac cagtagctcg ccgctttcca
     2161 gcgtcaggtt gatatcttcc agtgccggtt tgccgccata atcggcatag agatgagaga
     2221 tttgcagcat ctgcgcctcc ttttattgca cgaagcgcga ggtaacgtac tggctgtaat
     2281 cattcgctac agccgggacc ttgccctgct ctttcaaaaa ctgcgcggtg tcgatgatta
     2341 ctttgttcac cggtccggtc agttctgccg tttgttgctg cggcgtcaga taggtattcc
     2401 ccttaaccag ccccggaacg tcaccttccg gcacgccgct taaacgcgcc agtttgctga
     2461 tgttttccgg ctgtttcagc cacgcgtctg ggttagcaat gtacggttgc tgagcatcga
     2521 tggcgctttt agcgaacgct ttcactacct caggatgttt ctcggcaaaa tctttgcaca
     2581 ccacccagac gtccagcgtt ggtgcacccc actgcccgac ctgttcagaa tcggtcaaca
     2641 ccttgccgtc tttttccagg gcgttaaccg ccggtgccca gacataagca ccatcaatat
     2701 caccccgctg ccatgcggcg ataatcgcgg gcggctgcag gttcacaatc tccacttgcc
     2761 ctggtttaat cccccagtgt ttcagcgccg ccagcaggct gtagtgggtg gtggagataa
     2821 acggtacggc aatgcgtttg ccaatcaaat cttcgggttt gctgatagtt ttctttacca
     2881 ccagcgcttc ggagttaccc agttttgacg ccagcaagaa gacttcaatc ggcacctgtt
     2941 ggttggctgc aaccgctaat gggctggaac cgaggttgcc gatttgcacg tcgccagaag
     3001 ccagcgcccg cacgatgctg gctccgctgt caaacttacg ccagtccacg ctcgccccgc
     3061 tctctttagc aaaggtgttg tcggcctgag ccactttcgc cggttcggct gaggtttgat
     3121 acgccacggt gacgttcacc gcctgtgcct gaaaagcgat gaatgccagt gcggcaagaa
     3181 gtgtgttacg cgatgaaatt gccatgattg tctgctcccc agtcttgtta tgggagcagt
     3241 attcaggaat aaaaacattc attaaaagaa ttagtcgtta tcgcacagat gattttattc
     3301 ttagcaaaaa aacggcaaag gaaagattaa atatgcaatt actccgttct aacaattggg
     3361 aaaattacta cacttcattt tagtgatgca taaacaacca cattacgaga tttattactt
     3421 cattgtttct atcaatatca atacatataa taaaaccatt atattcgcat tttatatatc
     3481 actgtatcat tctcaatcac tcgcatatta cattcacata atgtatataa acaatacttg
     3541 ttcacagaac atatttttta aatgcaatta attgacaaac taaatcacat ctaaatacaa
     3601 tgtataaaac aaaataacta tacataccaa acatacaaac acttaatata tgaattgcat
     3661 aaaaacatta cccagtcgaa cctccgggtc tgaaagccct tgcttttcag ttattagcaa
     3721 catttaacat ttataaatta acatctggct gcgccagaga ttacgtctct gagtgcatcg
     3781 ttgtgcttgt agtataataa ataaaatgga gtgtcattaa gtggataagg ttttagattc
     3841 agccctcctt tcttcggcaa ataaaagaaa gggtatcctt gctattggcg cacatcctga
     3901 cgatatagaa ttaggctgtg gcgcatcgct tgctcgtctt gcgcaaaaag gaatttatat
     3961 cgcagcagtg gtgatgacta ccggcaactc tggtacagat ggaataatcg atcgccatga
     4021 agaatcgcgc aacgccccaa agatattagg gtgccaccaa actattcatc ttaattttgc
     4081 tgacacccgc gctcatttac agctcaatga tatgatttcc gccctggaag acatcattaa
     4141 aaatcaaatt ccttctgatg ttgaaatcat gcgggtatat accatgcatg atgccgaccg
     4201 ccatcaggat catctcgctg tttatcaagc ttcaatggtt gcctgccgca ctattccaca
     4261 aattctcggc tacgaaacct caagtacctg gctttcattt atgcctcagg tttttgaatc
     4321 cgttaaagaa gaatatttca cagtcaaact tgctgcatta aaaaaacata aaagccagga
     4381 acgacgtgat tatatgcgtc atgatcgcct gcgtgcagtt gcacaatttc gcgggcaaca
     4441 ggtcaatagc gatctgggtg aaggctttgt aattcataaa atgattcttt gagcaaattg
     4501 catgaaaacc tggatattta tctgtatgtc catagcaatg ttgctatggt ttttaagtac
     4561 gctaagacgt aaacccagtc aaaagaaagg ctgtattgac gccattatac ctgcgtataa
     4621 cgaaggcccg tgtctggcgc agtcactgga taatctactg cgtaaccctt atttttgccg
     4681 ggtaatttgc gttaacgacg gctccacgga caataccgaa gcggtcatgg cggaagtcaa
     4741 acgcaaatgg ggcgaccgct ttgttgccgt cacgcaaaaa aataccggta aaggtggtgc
     4801 gctgatgaat ggcctcaatt atgccacctg cgaccaggtt tttttaagtg atgccgacac
     4861 ctatgttccg cccgatcaag acggaatggg ctatatgctg gcagaaattg agcgcggggc
     4921 tgttaccgca catccgcgcg accgtaaagt tgccgatgat tgttatgaag cgcacgctac
     4981 agcagctcct gggcggcgca ccgtttatta tcagcggtgc ctgcggaatg ttccgtactg
     5041 atgtattgcg taagttcggt ttctcggatc gtactaaagt cgaagacctt gatctcacct
     5101 ggacattagt ggcaaacggc taccgtattc ggcaggcgaa tcgctgcatc gtatacccac
     5161 aggaatgcaa cagtccgcgt gaggagtggc gtcgctggcg gcgttggatt gtgggctacg
     5221 cggtctgtat gcgcctgcat aaaaggcttt tatttagccg cttcggtatc ttcagtatat
     5281 ttcctatgct gttggttgtg atttatggcg ttgggattta tctcactacc tggtttaatg
     5341 aattcatcac caccgggccg catggtgtgg tgttggcaat gtttccgctt atctgggtcg
     5401 gcgtagtttg tgttattggt gcttttagcg cctggtttca tcgttgctgg ttgttggtgc
     5461 ctttagcgcc gctttccgtt gtgtatgtat tattagctta tgccatctgg attatttatg
     5521 gacttattgc cttttttact ggacgcgaac ctcagcgcga caaacccacc cgctattccg
     5581 cactggtgga agcgtcaacc acttattccc aaccttctgt cacaggaact gaaaaactat
     5641 ctgaagctta atgttaaaga gaaaaatatt cagattgcag accaggtaat tattgatgaa
     5701 actgcaggtg aagttgttat cggcgcgaat acccgtattt gtcatggtgc cgttattcag
     5761 ggtccggtag tgattggcgc aaactgcctg ataggtaatt atgcgtttat tcgtcctggc
     5821 acaataatca gcaatggtgt aaaaattggt tttgccaccg aaattaaaaa tgcggttatt
     5881 gaagcggaag caacgattgg tccgcaatgt tttattgccg actcggtagt tgcaaaccag
     5941 gcatatttgg gcgcacaagt acgtaccagt aatcatcgtc tggatgaaca gcctgtgtct
     6001 gttcgaactc cagagggaat tatcgctacc ggatgcgata aattaggttg ttatatcggg
     6061 cagcgttcac gccttggcgt acaagttatt attttgcctg ggcgaattat ttccccgaac
     6121 acgcaacttg gcccgcgcgt gattgtagaa cgtaatttac ctaccggaac ttattcactc
     6181 cgacaagaac ttatccgtac aggagattaa aatgataaaa cggacgttat tagcggcggc
     6241 catttttagc gcattgcccg cttatgccgg gttaacgtcc attaccgcgg gctacgattt
     6301 taccgattat tctggcgatc atggcaaccg taatttagcg tatgctgaac tggtggcgaa
     6361 agttgaaaac gcaacgctgc tttttaatct ttcccagggg cgtcgtgatt atgaaactga
     6421 acatttcaat gccactcgcg gtcagggtgc ggtctggtat aaatggaata actggctgac
     6481 aacccgaacg ggtattgcct ttgcggataa tacgccggtc tttgcccgcc aggattttcg
     6541 tcaggatatt aacctggccc tgttgccaaa aacgcttttc acgaccggtt atcgctacac
     6601 taaatattac gatgatgtcg aagtcgatgc ctggcaaggc ggcgtatcac tctatactgg
     6661 cccggtgatc accagctacc gctataccca ttatgactcc agcgatgcag gtggtagtta
     6721 tagcaatatg atttccgtgc gtctgaatga cccgcgcggc actggttata cgcaactatg
     6781 gctaagccgc ggaacaggcg cttacaccta tgactggacg ccagaaacac gctacggcag
     6841 catgaagagc gtcagtctgc aacgtattca accgctgact gagcaactta atctcgggct
     6901 gacggcaggt aaagtgtggt acgacacccc aaccgatgat tataacggtc tgcaacttgc
     6961 agcccatctg acctggaaat tctgattcct tctgccgccc gctatcctgg gcggccttcc
     7021 ctgccgatta
//
LOCUS       DADMHC010000197         6939 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.200, whole genome shotgun sequence.
ACCESSION   DADMHC010000197 DADMHC010000000
VERSION     DADMHC010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6939)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6939)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6939
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.200"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(68..515)
                     /locus_tag="JNZ57_003446"
                     /pseudo
     CDS             complement(68..515)
                     /locus_tag="JNZ57_003446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312957.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
     gene            672..1601
                     /gene="metA"
                     /locus_tag="JNZ57_003447"
     CDS             672..1601
                     /gene="metA"
                     /locus_tag="JNZ57_003447"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HAY8829538.1"
                     /translation="MPIRVPDELPAVNFLREENVFVMTTSRASGQEIRPLKVLILNLM
                     PKKIETENQFLRLLSNSPLQVDIQLLRIDSRESRNTPAEHLNNFYCNFEDIQEQNFDG
                     LIVTGAPLGLVEFNDVAYWPQIKQVLEWSKDHVTSTLFVCWAVQAALNILYGIPKQTR
                     TDKLSGVYEHHILHPHALLTRGFDDSFLAPHSRYADFPAALIRDYTDLEILAETEEGD
                     AYLFASKDKRIAFVTGHPEYDAQTLAQEYFRDVEAGLDPEVPYNYFPHNDPQNTPRAS
                     WRSHGNLLFTNWLNYYVYQITPYDLRHMNPTLD"
     gene            1870..3471
                     /gene="aceB"
                     /locus_tag="JNZ57_003448"
     CDS             1870..3471
                     /gene="aceB"
                     /locus_tag="JNZ57_003448"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase A"
                     /protein_id="HAY8829539.1"
                     /translation="MTEQATTTDELAFTRPYGEQEKQILTAEAVEFLTELVTHFTPQR
                     NKLLAARIQQQQDIDNGTLPDFISETASICDADWKIRGIPADLEDRRVEITGPVERKM
                     VINALNANVKVFMADFEDSLAPDWNKVIDGQINLRDAVNGTISYTNEAGKIYQLKPNP
                     AVLICRVRGLHLPEKHVTWRGEAIPGSLFDFALYFFHNYQALLAKGSGPYFYLPKTQS
                     WQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGR
                     WDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFI
                     PSKDEEHNNQVLNKVKADKSLEANNGHDGTWIAHPGLADTAMAVFNDILGSRKNQLEV
                     MREQDAPITADQLLAPCDGERTEEGMRANIRVAVQYIEAWISGNGCVPIYGLMEDAAT
                     AEISRTSIWQWIHHQKMLSNGKPVTKALFRQMLGEEMKVIASELGEERFSQGRFDDAA
                     RLMEQITTSDELIDFLTLPGYCLLA"
     gene            3501..4805
                     /gene="aceA"
                     /locus_tag="JNZ57_003449"
     CDS             3501..4805
                     /gene="aceA"
                     /locus_tag="JNZ57_003449"
                     /EC_number="4.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase"
                     /protein_id="HAY8829540.1"
                     /translation="MKTRTQQIEELQKEWTQPRWEGITRPYSAEDVVKLRGSVNPECT
                     LAQLGAARMWRLLHGESKKGYINSLGALTGGQALQQAKAGIEAVYLSGWQVAADANLA
                     ASMYPDQSLYPANSVPAVVERINNTFRRADQIQWSAGIEPGDPRYVDYFLPIVADAEA
                     GFGGVLNAFELMKAMIEAGAAAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAARL
                     AADVTGVPTLLVARTDADAADLITSDCDPYDSEFITGERTSEGFFRTHAGIEQAISRG
                     LAYAPYADLVWCETSTPDLELARRFAQAIHAKYPGKLLAYNCSPSFNWQKNLDDKTIA
                     SFQQQLSDMGYKFQFITLAGIHSMWFNMFDLANAYAQGEGMKHYVEKVQQPEFAAAKD
                     GYTFVSHQQEVGTGYFDKVTTIIQGGTSSVTALTGSTEESQF"
     gene            4988..6724
                     /gene="aceK"
                     /locus_tag="JNZ57_003450"
     CDS             4988..6724
                     /gene="aceK"
                     /locus_tag="JNZ57_003450"
                     /EC_number="2.7.11.5"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional isocitrate dehydrogenase
                     kinase/phosphatase"
                     /protein_id="HAY8829541.1"
                     /translation="MPRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQ
                     LAMKNRIHLYDHHVGLVVEQLRCITNGQSTDAAFLLRVKEHYTRLLPDYPRFEIAESF
                     FNSVYCRLFDHRSLTPERLFIFSSQPERSFRTIPRPLAKDFHPDHGWESLLMRVISDL
                     PLRLRWQNKSRDIHYIIRHLTETLGTDNLAESHLQVANELFYRNKAAWLVGKLITPSG
                     TLPFLLPIHQTDDGELFIDTCLTTTAEASIVFGFARSYFMVYAPLPAALVEWLREILP
                     GKTTAELYMAIGCQKHAKTESYREYLVYLQGCNEQFIEAPGIRGMVMLVFTLPGFDRV
                     FKVIKDKFAPQKEMSAAHVRACYQLVKEHDRVGRMADTQEFENFVLEKRHISPALMEL
                     LLQEAAEKITDLGEQIVIRHLYIERRMVPLNIWLEQVEGQQLRDAIEEYGNAIRQLAA
                     ANIFPGDMLFKNFGVTRHGRVVFYDYDEICYMTEVNFRDIPPPRYPEDELASEPWYSV
                     SPGDVFPEEFRHWLCADPRIGPLFEEMHADLFRADYWRALQNRIREGHVEDVYAYRRR
                     QRFSVRYGEMLF"
     gene            complement(6693..>6939)
                     /locus_tag="JNZ57_003451"
     CDS             complement(6693..>6939)
                     /locus_tag="JNZ57_003451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829542.1"
                     /translation="HARLFGFTAEDIMDFWQHKAPQKYSAFELAFEFGHRVIAELILN
                     TLNKMAESFGFTDNPRYIAEKNYMEALLKKASPHTVR"
BASE COUNT         1693 a         1798 c         1785 g         1663 t
ORIGIN      
        1 gtgaaaaaaa tgccgggtgc gacgctggcg cgtcttctcc agcctgggca ggcacggcag
       61 gggcggctta ttcccccaca tacgccagat tcagcaacgg atacggtttc cccaaatcgt
      121 ccacctcaga gcgtcccgta accttaaaac ccaccttctt atagaaccca accgcctgct
      181 cattttgctc attaacgttg gttgtcagtt ccggtgccat cgagagcgca tgctccacca
      241 gcatccgacc cacgccgcag ccgcacacat caggatcgat aaacagcgca tccatatgct
      301 gcccacttaa caacataaac ccaaccggct gatcccgttc attaaccgcg acccacaacg
      361 gcgcttccgg caggaaggaa cgaactagct agcacctcca gctcggcccg atactctgct
      421 gataaaaaat cgtgtgtggc atcgacagat cgacaccaaa tcgcaacgag ttcctcccct
      481 tcctcatgcc gtgagcggcg aatactaata accattttct ctccttttag tcattcttat
      541 attctaacgt agtcttttcc ttgaaacttt ctcaccttca acatgcaggc tcgacattgg
      601 caaattttct ggttatcttc agctatctgg atgtctaaac gtataagtgt atgtagtgag
      661 gtaatcaggt tatgccgatt cgtgtgccgg acgagctacc cgccgtcaat ttcttgcgtg
      721 aagaaaacgt ctttgtgatg acaacttctc gtgcgtctgg tcaggaaatt cgtccactta
      781 aggttctgat ccttaacctg atgccgaaga agattgaaac tgaaaatcag tttctgcgcc
      841 tgctttcaaa ctcacctttg caggtcgata ttcagctgtt gcgcatcgat tcccgtgaat
      901 cgcgcaacac gcccgcagag catctgaaca acttctactg taactttgaa gatattcagg
      961 aacagaactt tgacggtctg attgtaaccg gtgcgccgct gggcctggtg gagtttaatg
     1021 atgtcgctta ctggccgcag atcaaacagg tgctggagtg gtcgaaagat cacgtcacct
     1081 cgacgctgtt tgtctgctgg gcggtacagg ccgcgctcaa tatcctctac ggcattccta
     1141 agcaaactcg caccgacaaa ctctctggcg tttacgagca tcatattctc catcctcatg
     1201 cgcttctgac gcgtggcttt gatgattcat tcctggcacc acattcgcgc tatgctgact
     1261 ttccggcagc gttgattcgt gattacaccg atctggaaat tctggcagag acggaagaag
     1321 gggatgcata tctgtttgcc agcaaagata agcgcattgc ctttgtgacg ggccatcccg
     1381 aatatgatgc gcaaacgctg gcgcaggaat atttccgcga tgtggaagcc ggactagacc
     1441 cggaagtacc gtataactat ttcccgcaca atgatccgca aaatacaccg cgagcgagct
     1501 ggcgtagtca cggtaatttg ctgtttacca actggctcaa ctattacgtc tatcagatca
     1561 cgccatacga tctacggcac atgaatccaa cgctggatta atcttctgtg atagtcgagc
     1621 gttaagcgat tcagcacctt acctcaggca ccttcgggtg ccttttttat ttccgaaacg
     1681 cacctcagga ggtgaataaa ttttattcac attgttatca ataagttatc aaatattttt
     1741 aattaaaatg gaaattgttt ttgattttgc attttaaatg agtggtctta gttgtgctga
     1801 acgaaaagcg cacaacgatc cttcgttcac agtggggaag ttttcggatc catgacgagg
     1861 agctgcacga tgactgaaca ggcaacaaca accgatgaac tggctttcac aaggccgtat
     1921 ggcgagcagg agaagcaaat tcttactgcc gaagcggtag aatttctgac tgagctggtg
     1981 acgcatttta cgccacaacg aaataaactt ctggcagcgc gcattcagca gcagcaagat
     2041 attgataacg gaacgttgcc tgattttatt tcggaaacag cttccatttg cgatgctgat
     2101 tggaaaattc gcgggattcc tgcggactta gaagaccgcc gcgtagagat aactggcccg
     2161 gtagagcgca agatggtgat caacgcgctc aacgccaatg tgaaagtctt tatggccgat
     2221 ttcgaagatt cactggcccc ggactggaac aaagtgatcg acgggcaaat taacctgcgt
     2281 gatgcagtta acggtaccat cagctatacc aatgaagcag gcaaaattta ccagctcaag
     2341 cccaatccag cggttttgat ttgtcgggta cgcggtctgc acttgccgga aaaacatgtc
     2401 acctggcgtg gtgaggcaat ccccggcagc ctgtttgatt ttgcgctcta tttcttccac
     2461 aactatcagg ctctgttggc aaagggcagt ggtccctatt tctatctgcc gaaaacccag
     2521 tcctggcagg aagcggcctg gtggagcgaa gtcttcagct atgcagaaga tcgctttaat
     2581 ctgccgcgcg gcaccatcaa ggcgacgttg ctgattgaaa cgctgcccgc cgtgttccag
     2641 atggatgaaa tccttcacgc gctgcgtgac catattgttg gtctgaactg cggtcgttgg
     2701 gattacatct tcagctatat caaaacgttg aaaaactatc ccgatcgcgt cctgccagac
     2761 agacaggcag tgacgatgga taaaccattc ctgaatgctt actcacgcct gttgattaaa
     2821 acctgccata aacgcggtgc ttttgcgatg ggcggcatgg cggcgtttat tccgagcaaa
     2881 gatgaagagc acaataacca ggtgctcaac aaagtaaaag cggataaatc gctggaagcc
     2941 aataacggtc acgatggcac atggatcgct cacccaggcc ttgcggatac ggcaatggcg
     3001 gtattcaacg acattctcgg ctcccgtaaa aatcagcttg aagtgatgcg cgaacaagac
     3061 gcgccgatta ctgccgatca gctactggca ccttgtgacg gtgaacgcac cgaagaaggt
     3121 atgcgcgcaa atattcgcgt agccgtgcag tacatcgaag cgtggatctc tggcaacggc
     3181 tgtgtgccga tttatggcct gatggaagat gcggcgacgg ctgaaatttc ccgtacctca
     3241 atctggcagt ggatccatca tcaaaaaatg ttgagcaatg gcaaaccggt aactaaagcc
     3301 ttgttccgcc agatgctggg cgaagagatg aaagtcattg ccagcgaact gggcgaagaa
     3361 cgtttctccc aggggcgttt tgacgatgcc gcacgcttga tggaacagat caccacttcc
     3421 gatgagttaa ttgatttcct gaccctgcca ggctactgcc tgttagcgta aaccaccaca
     3481 taactatgga gcatctgcac atgaaaaccc gtacacaaca aattgaagaa ttacagaaag
     3541 agtggactca accgcgttgg gaaggcatta ctcgcccata cagcgcggaa gatgtggtga
     3601 aattacgcgg ttcagtcaat cctgaatgca ccctggcgca actgggcgcg gcgagaatgt
     3661 ggcgtctgct gcatggcgag tcgaaaaaag gctacatcaa cagcctcggt gcactgactg
     3721 gcggtcaggc gctgcaacag gcgaaagcgg gtattgaagc agtctatctg tcgggatggc
     3781 aggtagcggc ggacgctaac ctggcggcca gcatgtatcc ggatcagtcg ctctatccgg
     3841 caaactcggt gccagctgtg gtggagcgga tcaacaatac tttccgccgt gcggatcaga
     3901 tccaatggtc cgcgggcatt gagccgggcg atccgcgcta tgtcgattac ttcctgccga
     3961 tcgttgccga tgcggaagcc ggttttggcg gtgtcctgaa tgcctttgaa ctgatgaaag
     4021 cgatgattga agccggtgca gcggcagttc acttcgaaga tcagctggcg tcagtgaaga
     4081 aatgcggtca catgggcggc aaagttttgg tgccaactca agaagctatt cagaaactgg
     4141 tcgcggcgcg tctggcagct gacgtgacgg gcgttccaac cctactggtt gctcgtaccg
     4201 atgccgatgc agcggatctg atcacctccg attgcgaccc gtatgacagc gaatttatta
     4261 ccggcgagcg taccagtgaa ggcttcttcc gtactcatgc gggcattgag caagcgatca
     4321 gccgtggcct ggcgtatgcg ccatatgctg acctggtctg gtgtgaaacc tccacgccgg
     4381 atctggaact ggcgcgtcgc tttgcacaag ctatccacgc gaaatatccg ggcaaactgc
     4441 tggcttataa ctgctcgccg tcgttcaact ggcagaaaaa cctcgacgac aaaactattg
     4501 ccagcttcca gcagcagctg tcggatatgg gctacaagtt ccagttcatc accctggcag
     4561 gtatccacag catgtggttc aacatgtttg acctggcaaa cgcctatgcc cagggcgagg
     4621 gtatgaagca ctacgttgag aaagtgcagc agccggaatt tgccgccgcg aaagatggct
     4681 ataccttcgt atctcaccag caggaagtgg gtacaggtta cttcgataaa gtgacgacta
     4741 ttattcaggg cggcacgtct tcagtcaccg cgctgaccgg ctccactgaa gaatcgcagt
     4801 tctaagcaac aacaaccgtt gctgactgta ggccggataa ggcgttcacg ccgcatccgg
     4861 caatcggtgc acgatgcctg atgcgacgct tgcgcgtctt atcatgccta cagccgttgc
     4921 cgaacgtagg ccggataagg catttacgcc gcatccggca attctctgct cctgatgagg
     4981 gcgctaaatg ccgcgtggcc tggaattact gattgctcaa accattttgc aaggcttcga
     5041 cgctcagtat ggtcgattcc tcgaagtgac ttccggggcg cagcagcgtt tcgaacaggc
     5101 cgactggcat gctgtccagc tggcgatgaa aaaccgtatc catctttacg atcatcacgt
     5161 tggtctggtc gtggagcaac tgcgctgcat tactaacggc caaagtacgg acgcggcatt
     5221 tttactgcgc gttaaagagc attacacgcg gctgttgccg gattacccgc gcttcgagat
     5281 tgcggagagc ttttttaact ccgtgtactg tcggttattt gaccaccgct cgcttactcc
     5341 cgagcggctt tttatcttta gctctcagcc agagcgcagc tttcgtacca ttccccgccc
     5401 gctggcgaaa gactttcacc ccgatcacgg ctgggaatct ctactgatgc gcgttatcag
     5461 cgacctgccg ctgcgcctgc gctggcagaa taaaagccgt gacattcatt acatcattcg
     5521 ccatctgacg gaaacgctgg ggacagacaa cctcgcggaa agtcatttac aggtggcgaa
     5581 cgaactgttt taccgcaata aagccgcctg gctggtgggc aaactgatca cgccttccgg
     5641 cacgttgccc ttcttactgc cgatccacca gacggacgac ggcgagttat ttattgatac
     5701 ctgcctgacg acgaccgccg aagcgagcat tgtttttggc tttgcgcgtt cttattttat
     5761 ggtttatgca ccgctgcccg cagcgctggt cgagtggcta cgggaaattc tgccaggtaa
     5821 aaccactgct gaattgtata tggctatcgg ctgccagaag cacgccaaaa ccgaaagcta
     5881 ccgcgaatat ctcgtttatc tacagggctg taatgagcag ttcattgaag cgccgggtat
     5941 tcgtggaatg gtgatgttgg tgtttacgct gccgggcttt gatcgggtat tcaaagtcat
     6001 caaagacaag ttcgcgccgc agaaagagat gtctgccgct cacgttcgtg cctgctatca
     6061 actggtgaaa gagcacgacc gtgtgggccg aatggcggac acccaggagt ttgaaaactt
     6121 tgtgctggag aagcggcata tttccccggc attaatggaa ttactgctcc aggaagcagc
     6181 ggaaaaaatc accgatcttg gtgagcagat tgtaattcgc catctctata tcgagcggcg
     6241 gatggtgccg ctcaatatct ggctggaaca agtggaaggt cagcagttgc gcgacgccat
     6301 tgaagaatac ggtaacgcta ttcgccagct tgccgctgct aacatttttc ctggcgacat
     6361 gctgtttaaa aacttcggtg tcacccgtca cgggcgtgtg gttttttatg attacgatga
     6421 aatttgctac atgacggaag tgaatttccg cgacatcccg ccgccgcgct atccggaaga
     6481 cgaacttgcc agcgaaccgt ggtacagcgt ctcgccgggc gatgttttcc cggaagagtt
     6541 tcgccactgg ctatgcgccg acccgcgtat tggtccgctg tttgaagaga tgcacgccga
     6601 cctgttccgc gctgattact ggcgcgcact acaaaaccgc atacgtgaag ggcatgtgga
     6661 agatgtttat gcgtatcggc gcaggcaaag atttagcgta cggtatgggg agatgctttt
     6721 ttgagtaaag cttccatata atttttctcc gcaatgtatc gagggttatc cgtaaagcca
     6781 aagctttcag ccatcttatt taatgtatta aggattaatt cagcaataac ccggtgacca
     6841 aattcaaaag ccaactcaaa ggcagagtat ttttgtggcg ctttgtgttg ccaaaaatcc
     6901 ataatatctt cagcggtaaa tccaaacagg cgtgcatgg
//
LOCUS       DADMHC010000198         6839 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.201, whole genome shotgun sequence.
ACCESSION   DADMHC010000198 DADMHC010000000
VERSION     DADMHC010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6839)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6839)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6839
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.201"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..298
                     /locus_tag="JNZ57_003452"
     CDS             <1..298
                     /locus_tag="JNZ57_003452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313164.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY8829543.1"
                     /translation="LPYLFLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVT
                     FANVFTIIPPVVEVGDWDSTLWMIGGPVFFSLLAMAIYQNYCSRMANKPEVALD"
     gene            complement(449..3772)
                     /gene="mscM"
                     /locus_tag="JNZ57_003453"
     CDS             complement(449..3772)
                     /gene="mscM"
                     /locus_tag="JNZ57_003453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="miniconductance mechanosensitive channel MscM"
                     /protein_id="HAY8829544.1"
                     /translation="MRLIITFLIAWCLSWGAYAATAPDSKQITQELEQAKAAKPAQPE
                     VVEALQSALNALEERKGSLERIKQYQQVIDNYPKLSATLRAQLNNMRDEPRSVSPGMS
                     TDALNQEILQVSSQLLDKSRQAQQEQERTREIADSLNQLPQQQTDARRQLNEIERRLG
                     TLTGNTPLNQAQNFALQSDSASLKALVDELELAQLSANNRQELARLRSELAEKESQQL
                     DAYLQALRNQLNSQRQLEAERALESTELLAENSADLPKDIVAQFKINRELSAALNQQA
                     QRMDLVASQQRQAASQTLQVRQALNTLREQSQWLGSSNLLGEALRAQVARLPEMPKPQ
                     QLDTEMAQLRVQRLRYEDLLNKQPLLRQIHQADGQPLTAEQNRILEAQLRTQRELLNS
                     LLQGGDTLLLELTKLKVSNGQLEDALKEVNEATHRYLFWTSDVRPMTIAWPLEIAQDL
                     RRLISLDTFSQLGKASVMMLTSKETILPLFGALILVGCSIYSRRYFTRFLERSAAKVG
                     KVIQDHFWLTLRTLFWSILVASPLPVLWMTLGYGLREAWPYPLAVAIGDGVTATVPLL
                     WVVMICATFARPNGLFIAHFGWPRERVSRGMRYYLMSIGLIVPLIMALMMFDNLDDRE
                     FSGSLGRLCFILICGALAVVTLSLKKAGIPLYLNKEGSGDNITNHMLWNMMIGAPLVA
                     ILASAVGYLATAQALLARLETSVAIWFLLLVVYHVIRRWMLIQRRRLAFDRAKHRRAE
                     MLAQRARGEEEAHHHSSPEGAIEVDESEVDLDAISAQSLRLVRSILMLIALLSVIVLW
                     SEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILVFIITTQLVRNLPALLE
                     LAILQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKLQWLVAALGVGLGFG
                     LQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTISDWDRKEIIVPNK
                     AFITEQFINWSLSDSVTRVVLTIPAPADANSEEVTEILLTAARRCSLVIDNPAPEVFL
                     VDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFHAHGIDMPFPPFQMRLESLNG
                     KQTGRTLTSAGKGRQAGSL"
     gene            complement(3794..4762)
                     /gene="psd"
                     /locus_tag="JNZ57_003454"
     CDS             complement(3794..4762)
                     /gene="psd"
                     /locus_tag="JNZ57_003454"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313166.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HAY8829545.1"
                     /translation="MLNSFKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKY
                     YKVDMKEAQKPDTASYRTFNEFFVRPLRDEVRPIDTDPNVLVMPADGVISQLGKIEED
                     KILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYV
                     PGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWAGTIT
                     PPREGIIKRWTWPAGENDGSVALLKGQEMGRFKLGSTVINLFAPGKVNLVEQLESLSV
                     TKIGQPLAVSTETFVTPDAEPAPLPAEEIEAEHDASPLVDDKKDQV"
     gene            complement(4859..5911)
                     /gene="rsgA"
                     /locus_tag="JNZ57_003455"
     CDS             complement(4859..5911)
                     /gene="rsgA"
                     /locus_tag="JNZ57_003455"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313167.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small ribosomal subunit biogenesis GTPase RsgA"
                     /protein_id="HAY8829546.1"
                     /translation="MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIV
                     ISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHE
                     RTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLN
                     KIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGV
                     GKSSLLNALLGLQKEILTNDVSDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW
                     HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE
                     SMAQVKTRKNFSDTDD"
     gene            6006..6551
                     /gene="orn"
                     /locus_tag="JNZ57_003456"
     CDS             6006..6551
                     /gene="orn"
                     /locus_tag="JNZ57_003456"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HAY8829547.1"
                     /translation="MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGP
                     TIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKS
                     PICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQA
                     MDDIRESVAELAYYREHFIKL"
     gene            6762..6837
                     /locus_tag="JNZ57_003457"
     tRNA            6762..6837
                     /locus_tag="JNZ57_003457"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6795..6797,aa:Gly,seq:gcc)
BASE COUNT         1577 a         1837 c         1841 g         1584 t
ORIGIN      
        1 gcttccttac ctgttcctcg cgctggcttt cccattcttt aaagcacgtc aggatctcga
       61 cagaccattt gtgattttca aaacgcgtat gtcggcaatg attgcgacgg tggttgtcgt
      121 actggtggtg acatttgcga acgtcttcac cattattccg cctgtggttg aagtcggaga
      181 ctgggacagc acattgtgga tgattggcgg ccctgtcttc ttctcgctgt tagcgatggc
      241 gatttaccag aactattgca gtcgcatggc gaataaacct gaggtagctc tcgactgatc
      301 atatgaaatc ctgcaactca tcgtctctcc ggcgatgagt tgtcaggaag taatgcgtat
      361 ggatgatact ctccagggcc ggtgataact gaagatgatg ttaagctgct aaatgagcca
      421 cgttgacatc atttggcagc ttcatgcatt acaaacttcc cgcctgacga cctttgcccg
      481 cagacgtcag cgttctcccc gtttgtttac cgttgaggct ttccagacgc atctggaagg
      541 gcgggaatgg catatcgata ccgtgggcat ggaagccagc cagaatcagc tggtggatct
      601 catggcgtag cggcatacgg tgacccatct cagcggcata aatacgcagc tcgaaaatct
      661 gaatcccttg ttgcagatcc accaggaaga cttccggtgc cgggttgtcg atcaccagcg
      721 agcagcgacg cgctgcggtg agcaggattt ccgtcacttc ttcactgttg gcatcagcag
      781 gggccggaat cgtcaacact acgcgcgtaa ccgagtcaga gagcgaccag ttgataaact
      841 gctcggtaat aaacgccttg ttcggcacga ttatctcttt acggtcccag tcgctgatgg
      901 tggtggcgcg ggtgttaatt ttcgtcacgc taccggtgag atcgcgaatt gtcaccgtat
      961 cgccaatgcg aatcggtttt tcgaacagga taatcagacc agagataaag ttggcgaaaa
     1021 tttcctgcaa accaaaaccg agaccaacac cgagcgcggc gaccagccac tgcaatttcg
     1081 accactcaat accaatcatc gagaagccga ccagcccgcc aatcagcatc agcagatatt
     1141 tggtgatggt ggtgatggcg tagcctgtac ccggcgttaa atccaggtgc tgcaaaatcg
     1201 ccagttccag cagcgcgggc aggttgcgca ccagctgcgt ggtgatgata aacaccagaa
     1261 tggcaatcag caccgcaccg agggtaattg gctccagact ttctacgcct tgtaccgtgg
     1321 aggtgacatc ccacagcgaa atattttcga ggaagccgaa agcggaatgg atttctgacc
     1381 acagcacaat gacagaaagc agggcgatca acatcaaaat tgagcgcacc agccgcaagg
     1441 attgcgcact gatggcatcg agatcgactt cgctttcatc gacttcaatt gctccttccg
     1501 ggctactgtg atgatgcgct tcctcttcgc cacgcgcacg ttgcgctaac atctctgccc
     1561 ggcgatgctt cgcccggtca aacgccagcc tgcggcgctg gatcagcatc cagcggcgga
     1621 taacgtgata aaccaccagt agcaggaacc agatggcaac cgaggtttca agcctcgcta
     1681 acagcgcctg tgccgttgcc agataaccca cagccgacgc cagaatggca accaacggcg
     1741 cgccaatcat catgttccac agcatatggt tggtaatgtt gtcgccgctg ccctctttgt
     1801 tgagatacag tgggatcccg gcctttttca ggctgagggt gaccaccgcc agcgcaccgc
     1861 aaatgaggat aaagcaaagc cgtcccagcg aaccggagaa ttcacggtcg tcgaggttat
     1921 cgaacatcat cagcgccata atcagcggca caataagccc gatgctcatc aggtagtagc
     1981 gcatcccacg ggaaacacgt tcgcgcggcc agccaaaatg agcgataaac aagccgttcg
     2041 ggcgggcaaa ggtggcgcaa atcatcacta cccacagcag cggcacggta gccgttacac
     2101 catcgccaat cgcgaccgcc agcggataag gccacgcctc gcgcaagccg taacccagcg
     2161 tcatccacag caccggtaac ggtgacgcga cgagaatcga ccagaaaaga gtgcgcaacg
     2221 tcagccagaa gtgatcctga atcactttgc caactttcgc cgccgaacgt tcaagaaaac
     2281 gggtgaaata gcggcgcgag taaatactgc aaccgaccag aatcaacgcg ccaaacagcg
     2341 gcaaaattgt ctctttgctg gtcagcatca tcacactggc tttgcccaac tgactgaagg
     2401 tgtccagcga aatgagacga cgcagatcct gggcgatttc cagcggccag gcgatggtca
     2461 tcgggcgcac gtcagaggtc cagaacagat agcggtgcgt tgcttcgttc acctctttca
     2521 gcgcatcctc cagttgcccg ttggagactt tcagcttggt cagttccaat agtagcgtgt
     2581 cgccaccctg caacaatgag ttcagcaact cacgctgagt gcgcagttgt gcttccagaa
     2641 tacggttttg ctcggcggtc agcggctgac cgtcggcctg atggatttgc cgtagcagcg
     2701 gctgtttatt aagcagatcc tcataacgta accgttgcac acgcaactgc gccatttcgg
     2761 tatcaagctg ttgtggtttt ggcatttctg gcagccgtgc cacctgcgcc cgcagcgctt
     2821 cgccgagcag attggacgat cccagccatt gcgactgttc acgcagcgta ttcaacgcct
     2881 gccggacctg taacgtctgg ctggcagcct gacgctgttg cgaggcaacg agatccatcc
     2941 gctgcgcctg ttgattcaaa gccgccgata gttcgcggtt aattttgaat tgcgcgacga
     3001 tatctttcgg caaatcggcg ctgttttctg ccagcaattc ggtactttcc agcgcccgct
     3061 ccgcctcaag ctgacgttgg ctgtttaatt gattacgcaa ggcctgcaaa tacgcatcca
     3121 gttgctggct ctctttttcc gccagctctg agcgtaagcg cgctaattcc tggcggttat
     3181 tggcagacag ctgcgccagc tccagttcat caacgagcgc cttaagactt gcagagtcag
     3241 actgcaacgc gaaattttgt gcctgattga gcggagtatt gccggtaagc gttcccaggc
     3301 ggcgctcgat ctcatttaac tgacggcggg cgtcggtttg ctgttgcggc agttgattca
     3361 gcgaatcggc aatctcgcgg gtgcgctcct gctcttgctg ggcctgacgg cttttatcca
     3421 gcaactggct gctgacctgg agaatttcct gattcagcgc gtcggtagac attcccggcg
     3481 acacgctgcg cggctcgtca cgcatgttgt ttaattgtgc gcgcagagta gcggagagtt
     3541 tcggataatt atcgataact tgctgatatt gtttgatgcg ctcaagggaa ccttttcgtt
     3601 cctcaagcgc atttaaggca gactggagcg cctctacgac ttccggctgt gcgggtttcg
     3661 ccgcttttgc ctgctccagt tcctgagtga tttgtttgct atcgggggcc gtcgcggcgt
     3721 acgcccccca actgaggcac caggctatca gaaaagtgat aatcaggcgc acgtcagcgt
     3781 ttcctttgat ggattagacc tggtcttttt tatcgtcaac caatgggctg gcgtcgtgtt
     3841 ctgcttcgat ctcttcagca ggaagtgggg cgggttcagc gtctggcgta acaaaggttt
     3901 cggtagatac tgccagcggc tggccaattt tcgtgacaga caggctttcc agttgctcaa
     3961 ccagattcac tttacccggt gcaaacaggt tgataacggt ggaaccgagt ttaaagcgac
     4021 ccatttcctg gcctttcagc agtgccacag aaccgtcgtt ttccccggca ggccaggtcc
     4081 agcgcttgat gataccttcg cgcggcggcg taatggtgcc cgcccagacc gtctcaatgc
     4141 tgccaacaat cgtcgctccg accagaatct gcgccattgg gccaaattcg gtatcgaaaa
     4201 ggcaaatcac gcgttcgtta cgggcaaaca gattcggcac gttctgagcg gtgagatggt
     4261 taacggagaa gagatcgccc ggcacgtaga tcatctcacg cagaataccg ttgcacggca
     4321 tgtgtacgcg atggtagtca cgcggggaga ggtaagtggt cacaaacgta ccgttgcgga
     4381 acaggtccgc catcagatag ttgcctgcca gcagggcttc gaggctgtag ttgtggcctt
     4441 tggcttgcag gattttatct tcttcgattt tacccaactg gctgataacg ccatcggcag
     4501 gcatgaccag tacattcgga tcggtatcga ttgggcgtac ttcgtcacgc agcggacgga
     4561 caaagaattc gttaaaggtg cggtagctgg cggtgtccgg cttttgcgcc tctttcatgt
     4621 cgaccttgta gtatttaacg aacagatcga taaccagttt tgtcagccat cctgcccgct
     4681 tgcttgcgcc ccaacccgcc aggcgagtaa gccatagttt cggcagaatg tactgtagcg
     4741 aaagtttaaa tgaatttaac aaggtagcct ccaggccatt gttttgtcgt tcctgatccg
     4801 gccaacatgc cggagcctga aaaaaagggg acgattctaa cgacggttag cttaattgtc
     4861 agtcatccgt atcagaaaag tttttacgcg tttttacctg cgccatgctt tccagaatac
     4921 ggtgatagtt ttcgaaacgg gtttccgcga ttttcccttc ctcaaccgct tcccggatag
     4981 cgcagcccgg atcggtatcg tgtttgcaat cgcgatattt acacagacct aaatagtcat
     5041 ggaattcgac aaagccctga gtgatttgtt ccggctccag gtgccagagg ccgaactcac
     5101 gcacaccagg ggaatcaatc acatcaccgc cgtgcgggaa gtgatacagc cgagcggcgg
     5161 tcgtggtgtg ctgaccgagc cccgagttgt cagagacatc gttggtcagg atctcttttt
     5221 gcagccccag caacgcattc agcaggctgg atttgccgac gccagactgc ccggcaaaaa
     5281 tgctgatgcg cccggtcaac gcctcttcca gcggttttag cccatcctga gtatggctgg
     5341 aaaccatcaa tacgcgataa ccgatattgc ggtagatatc catctgctcg ttgacgaacg
     5401 ccatgccttc gtcgtccagc aggtctatct tgttgagcac aataatcggc tcaatctgca
     5461 aggtttcgca ggccaccagg taacggtcga taatattgag tgacagctcc ggcaaaatgg
     5521 cggagacaat gacaatctgg tcgatgttgg cggcaatagg ttttacgccg tcgtagaaat
     5581 ccggacgcgt caacaccgag gtacgctcat gcaccgcttc cacgatccct ttgacattta
     5641 cgccttccgc cgccggttta cccggacgcc agactacacg gtcgccggtc accagcgaac
     5701 ggatggtacg gcgaatattg cagcggtgaa cgtcgccatc ggcggattcc acatcagcgt
     5761 gcataccaaa gcggctgatg acgatacctt catcaggctc gccaaacaga ttgtcgtcgt
     5821 agtcgggctt ctccttagac gttttaagac gacgctggtg attggcgttc acgcggcgct
     5881 gctggccttt ggagagttta tttttactca atcgtacaga ctcctggtcg cccctgatgg
     5941 gcaaaacatc tatgatacac gcaattgtgg atcaatatag tcactgtgaa tgggtggaaa
     6001 atagcatgag tgccaatgaa aacaacctga tttggatcga tcttgagatg actggtctgg
     6061 atcccgagcg cgatcgcatt attgagattg ccacgctggt gaccgatgcc aatctgaata
     6121 ttctggcaga agggccgacc attgcagtac atcagtccga tgaacagctg gcgctgatgg
     6181 atgactggaa cgtgcgcacc cataccgcca gcgggctggt agagcgcgtg aaagcgagca
     6241 cgatgggcga tcgggaagct gaactggcaa cgctcgaatt cttaaaacag tgggtgcctg
     6301 cgggaaaatc gccgatttgc ggtaacagca tcggacagga ccgtcgtttc ctgtttaaat
     6361 acatgccgga gctggaagcc tacttccact accgttatct cgatgtcagc accctgaaag
     6421 agctggcgcg ccgctggaag ccggaaattc tggatggttt taccaagcag gggacgcatc
     6481 aggcgatgga tgatatccgt gaatcggtgg cggagctggc ttactaccgc gagcatttta
     6541 tcaagctgta aaatttttcc tggtcacgta agcgccggaa tccacttgcg gcggcgtgat
     6601 tttgacgcta aattgaacgt cttgctgata atttcagcac ttgagataaa aacgcaaaaa
     6661 aaactttttt ggggggttgc agagggaaag atttctcgta taatgcgcct cccgtaacga
     6721 cgcagaaatg cgaaaattac gaaagcaaaa ttaagtagta cgcgggaata gctcagttgg
     6781 tagagcacga ccttgccaag gtcggggtcg cgagttcgag tctcgtttcc cgctccaaa
//
LOCUS       DADMHC010000199         6776 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.202, whole genome shotgun sequence.
ACCESSION   DADMHC010000199 DADMHC010000000
VERSION     DADMHC010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6776)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6776)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6776
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.202"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..473
                     /locus_tag="JNZ57_003458"
     CDS             <1..473
                     /locus_tag="JNZ57_003458"
                     /inference="COORDINATES: protein motif:HMM:TIGR02601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829548.1"
                     /translation="TAEGYGGAIYTNSATAPYLIDISVDDSYSQNGGVLVDENNSAAG
                     YGDGPSTAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDL
                     VLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDKY"
     gene            516..2507
                     /locus_tag="JNZ57_003459"
     CDS             516..2507
                     /locus_tag="JNZ57_003459"
                     /inference="COORDINATES: protein motif:HMM:NF007285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HAY8829549.1"
                     /translation="MHSLTGFQNGTLNIDAGGNVTVNQGSFAGTIEGAGQLTIAQNGS
                     YVLSGAQSMALTGDIVVDDGAVLSLEGDAADLAALQDDPQSIVLNGGVLDLSDFSTWQ
                     SGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLAN
                     NNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITANVDTRTTTTEH
                     GRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTFTKTGAGTLELTASGTTQS
                     AVRVEEGTLKGDVADIFPYASSLWVGDGATFVTGADQDIQSIDATSSGTIDISDGTVL
                     RLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLADVTVNGDLTN
                     TSGAVSLQNGVAGDTLTVNGDYTGGGTLLFDSELNGDDSVSDQLVMNGNTAGNTTVVV
                     NSITGIGEPISTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYL
                     RSQEVTPPSPPDPDPDPTPDPDPTPDPIPAYQPVLNAKVGGYLNNLRAANQAFMMERR
                     DHAGGDGQTLNLRVIGGRYHYTVAGQLAQQEDTSTVQLSGGLFSGRWGTDGEWMLGAV
                     GGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWYQHGN"
     gene            2523..3035
                     /locus_tag="JNZ57_003460"
     CDS             2523..3035
                     /locus_tag="JNZ57_003460"
                     /inference="COORDINATES: protein motif:HMM:TIGR01414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HAY8829550.1"
                     /translation="MDSWLQYAWFNNDVSEHEDGVDRYHSSGIIASLEAGYQWLPGRG
                     VVIEPQAQVIYQDVQQDDFTAANHARVSQSQGDDIQTRLGLHSEWRTAVGVTPTLDLN
                     YYHDPHATEIEEDGSTISDDAVKRRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQT
                     AGFLSMTVKW"
     gene            complement(3163..3885)
                     /locus_tag="JNZ57_003461"
     CDS             complement(3163..3885)
                     /locus_tag="JNZ57_003461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-demethylubiquinone
                     3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol
                     methylase"
                     /protein_id="HAY8829551.1"
                     /translation="MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLR
                     LGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESG
                     IQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTL
                     NRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNP
                     LTNTFKLGPGVDVNYMLHTQNK"
     gene            4032..6659
                     /gene="gyrA"
                     /locus_tag="JNZ57_003462"
     CDS             4032..6659
                     /gene="gyrA"
                     /locus_tag="JNZ57_003462"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HAY8829552.1"
                     /translation="MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPV
                     HRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYYTIVRMAQPFSLRYML
                     VDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMP
                     TKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFP
                     TAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEK
                     IAELIKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINM
                     VALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDP
                     IIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYL
                     TEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELEL
                     VREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKG
                     KSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLP
                     LEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDEL
                     IGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRG
                     DGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMI
                     TDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAA
                     EGDDEIAPEVDVDDEPEEE"
BASE COUNT         1627 a         1672 c         1951 g         1526 t
ORIGIN      
        1 acactgccga aggttatggc ggggcgatat ataccaatag cgcgacggct ccctatctta
       61 ttgatatttc tgttgatgac agctacagcc agaacggcgg cgtgttagtg gatgagaaca
      121 acagcgcagc aggctatgga gatggtcctt ccactgcggc gggtggcttt atgtatctcg
      181 gcttaagtga agttaccttt gatattgccg acggaaaaac gctggttatc ggcaatacag
      241 agaatgacgg agctgttgac tctattgctg gtaccgggtt gatcaccaaa acaggttccg
      301 gcgatctggt acttaatgca gataacaatg actttactgg cgagatgcag attgaaaacg
      361 gtgaagttac cctgggccgc agcaactccc tgatgaatgt cggcgatacg cattgccagg
      421 acgatccgca agactgctac ggtctgacga tagggagtat tgataagtac tagaatcagg
      481 cagagctaaa cgttggctcc acccaacaaa cctttgtgca ctcattgacg ggctttcaga
      541 atggcacttt aaatatcgat gctggtggca atgttactgt taatcaaggt agttttgctg
      601 gcaccatcga aggtgctggt cagctcacca ttgcgcaaaa cggcagctac gtgctgtcgg
      661 gggcgcagtc gatggcgcta accggcgata tagtcgttga tgatggtgcg gtgctttcgc
      721 tggaaggcga cgcggcagat ctcgccgctc tccaggacga tccgcagtcg atcgtgttaa
      781 acggcggtgt gctcgatctc tctgatttct ccacctggca gagcggcaca tcatacaatg
      841 atggccttga agtcagtggc agcagcggaa cggttatcgg cagtcaggat gtggtagatc
      901 ttgcaggtgg cgacaatttg catatcggcg gcgacgggaa agatggcgtc tacgtggtgg
      961 tcgatgcgag cgacgggcag gtaagtctgg caaacaataa tagttatttg ggcacaacac
     1021 aaatcgcctc cggtacgctg atggtgagcg acaactcgca gcttggagat acccactata
     1081 accgccaggt tatctttacc gataagcaac aagaaagcgt gatggagatt actgccaatg
     1141 tcgatactcg cactacgacg actgagcatg ggcgtgatat tgaaatgcgc gccgacggtg
     1201 aagtggcagt tgatgcgggg gtagacacgc agtggggcgc actgatggct gacagcagcg
     1261 ggcagcatca ggatgagggt agcacattta ctaaaacggg ggcgggtacg ctggagctga
     1321 ccgccagcgg tacaacgcag tcggcagtac gtgtcgaaga aggcaccctg aaaggcgatg
     1381 ttgcggatat ctttccttat gcttcgtcac tgtgggtcgg tgatggggcg acgttcgtta
     1441 ctggcgcgga tcaggatatt cagtctatcg atgctacttc cagcggcact atcgatatca
     1501 gcgatggtac ggttttgcgt ctgaccgggc aggatacttc cgtcgccctt aatgcctcat
     1561 tgtttaacgg cgatgggacg ctggtgaatg ctaccgatgg cgtgacgttg acaggtgagc
     1621 ttaataccaa ccttgaaact gacagcctga cctatcttgc cgacgtgacg gttaatggtg
     1681 atctgaccaa tacgtccggt gcggttagcc tgcaaaatgg cgtcgctggc gatacgctaa
     1741 cggtaaacgg tgattatacc ggcggcggta cgctactgtt cgacagcgaa ttaaacggcg
     1801 atgactcggt aagcgatcaa ttggtgatga acggtaatac tgctggcaac acaactgtgg
     1861 tggttaactc cattacaggg attggtgagc cgatatcgac aggcattaaa gtggttgatt
     1921 tcgcagctga tcccacgcag tttcaaaaca atgcacagtt cagtctggct ggcagtggct
     1981 acgtcaacat gggagcgtat gactacacgc tagtggaaga taacaacgac tggtatctgc
     2041 gatcgcaaga agtaacgccg ccatcgccac ctgatccaga cccggaccca acacccgatc
     2101 ctgacccaac acccgatcca atccccgctt accagccggt gctgaatgcc aaagttggcg
     2161 gttatctcaa taacctgcgg gcggcaaatc aggcgtttat gatggagcga cgcgatcacg
     2221 ctggtggcga tggtcagacg ctgaatttac gtgttatcgg cggacgttat cattacacgg
     2281 tggcagggca actggctcag caggaagaca cttctacggt gcagcttagc ggcggcttgt
     2341 ttagcgggcg ctggggcacg gatggcgagt ggatgcttgg ggcggttggt ggctacagtg
     2401 ataatcaggg cgacagccgc tcgaatatga ccggaactcg cgccgataac cagaaccacg
     2461 gttatgccgt tgggctgacc tcaagctggt atcagcacgg taattagaag cagggggcct
     2521 ggctggatag ctggctgcaa tacgcgtggt ttaacaatga tgtttccgaa catgaagatg
     2581 gcgtggatcg ttaccattcg tcggggatta tcgcctcgct ggaagccggg tatcagtggt
     2641 taccggggcg tggtgtggtg attgaaccgc aggcgcaggt gatttatcag gacgtgcagc
     2701 aggatgattt taccgccgct aaccatgcgc gcgtgtcaca atcgcagggg gatgatattc
     2761 agacgcggct gggtttacac agcgaatggc gtaccgcggt tggtgtcaca ccaacattag
     2821 atctgaatta ttatcacgat ccccatgcga cggaaattga agaagatggc agcactatca
     2881 gtgacgatgc ggtgaagcga cggggtgaaa taaaagtggg agtcacgggc aatatcagtc
     2941 agcgagtgtc cctgcgcggc agcgtggcgt ggcagaaagg gagtgatgat tttgcccaga
     3001 cggcagggtt tttgtcgatg acggtgaaat ggtaatcact gtctagtcgg cacggttgcc
     3061 ggatgcggcg taaacgcctt atccggccta cggggagcat ttgtaggcct gataagacgc
     3121 ggcaagcgtc gcatcaggca ttggctcggc caaacaacaa cctcacttat tctgcgtgtg
     3181 cagcatatag ttcacatcca cgccggggcc gagtttaaaa gtattagtga gcgggttgta
     3241 atgtagcccg gttatatgtc gctctttaag gcttgtctga tctacccagc caagcagttc
     3301 tgccggttta ataaacttct tcacatcatg cgtgcctttg ggcaccatgc gcaaaatata
     3361 ttccgcgcca accaccgcca tcagccatga cttgccgttg cggttaagcg tcgagaaaaa
     3421 gacatcgccg cctggtttca ccagttgcgc acaggctctg accactgact gcggatcggg
     3481 gacgtgctcc agcatctcca tgcaggtcac cacatcatac tgcccggcat gttttgccgc
     3541 gtgctcttcc acggtttcct gcacataatc cacctgaatg ccgctttcca gcgcgtgcag
     3601 ttttgccacc tgcaatggct caaagcccat atccagaccg gtcaccgtcg cgccttcgcg
     3661 cgccatactc tcggccagaa tgccgccgcc acaaccgaca tcgagcacct ttttgccaaa
     3721 taaaccgcca gcacgctcgg caatatagcc cagacgcagc gggttaatgc ggtgcaacgg
     3781 tttgaactca ccttcaagat cccaccagcg ggaggcgacg gcttcaaatt tagcgatctc
     3841 ttcgtggtct acgttatggt tttccggcga tttttcggca ttcattggca cttctactcc
     3901 gtaattggca agacaaacga gtatatcagg cattggatgt gaataaagcg tataggttta
     3961 cctcaaactg cgcggctgtg ttataatttg cgacctttga atccgggata cagtagaggg
     4021 atagcggtta gatgagcgac cttgcgagag aaattacacc ggtcaacatt gaggaagagc
     4081 tgaagagctc ctatctggat tatgcgatgt cggtcattgt tggccgtgcg ctgccagatg
     4141 tccgagatgg cctgaagccg gtacaccgtc gcgtacttta cgccatgaac gtactaggca
     4201 atgactggaa caaagcctat aaaaaatctg cccgtgtcgt tggtgacgta atcggtaaat
     4261 accatcccca tggtgactcg gcggtttatt acacgatcgt ccgtatggcg cagccattct
     4321 cgctgcgtta catgctggta gacggtcagg gtaacttcgg ttccatcgac ggcgactctg
     4381 cggcggcaat gcgttatacg gaaatccgtc tggcgaaaat tgcccatgaa ctgatggccg
     4441 atctcgaaaa agagacggtc gatttcgttg ataactatga cggcacggaa aaaattcccg
     4501 acgtcatgcc aaccaaaatt cctaacctgc tggtgaacgg ttcttccggt atcgccgtag
     4561 gtatggcaac caacatcccg ccgcacaacc tgacggaagt catcaacggt tgtctggcgt
     4621 atatcgatga tgaagacatc agcattgaag ggctgatgga acacatcccg gggccggact
     4681 tcccgacggc ggcaatcatt aacggtcgtc gcggtattga agaagcttac cgtaccggtc
     4741 gcggcaaggt gtatatccgc gctcgcgcag aagtggaagt tgacgccaaa accggtcgtg
     4801 aaaccattat cgtccacgaa attccgtatc aggtaaacaa agcgcgcctg atcgagaaga
     4861 ttgcggaact gataaaagaa aaacgcgtgg aaggcatcag cgcgctgcgt gacgagtctg
     4921 acaaagacgg tatgcgcatc gtgattgaag tgaaacgcga tgcggtcggt gaagttgtgc
     4981 tcaacaacct ctactcccag acccagttgc aggtttcttt cggtatcaac atggtggcat
     5041 tgcaccatgg tcagccgaag atcatgaacc tgaaagacat catcgcggcg tttgttcgtc
     5101 accgccgtga agtggtgacc cgtcgtacta ttttcgaact gcgtaaagct cgcgatcgtg
     5161 ctcatatcct tgaagcatta gccgtggcgc tggcgaacat cgacccgatc atcgaactga
     5221 tccgtcatgc gccgacgcct gcagaagcga aaactgcgct ggttgctaat ccgtggcagc
     5281 tgggcaacgt tgccgcgatg ctcgaacgtg ctggcgacga tgctgcgcgt ccggaatggc
     5341 tggagccaga gttcggcgtg cgtgatggtc tgtactacct gaccgaacag caagctcagg
     5401 cgattctgga tctgcgtttg cagaaactga ccggccttga gcacgaaaaa ctgctcgacg
     5461 aatacaaaga gctgctggat cagatcgcgg aactgttgcg tattcttggt agcgccgatc
     5521 gtttgatgga agtgatccgt gaagagctgg agctggttcg tgaacagttc ggtgacaaac
     5581 gtcgtactga aatcaccgcc aacagcgcag acatcaacct ggaagatctg atcactcagg
     5641 aagatgtggt agtgacgctc tctcaccagg gctacgttaa gtatcagccg ctttctgaat
     5701 acgaagcgca gcgtcgtggc gggaaaggta aatctgccgc acgtattaaa gaagaagact
     5761 ttatcgaccg actgctggtg gcgaacactc acgaccatat tctgtgcttc tccagccgtg
     5821 gtcgcgtcta ttcgatgaaa gtttatcagt tgccggaagc cactcgtggc gcgcgcggtc
     5881 gtccgatcgt caacctgctg ccgctggagc aggacgaacg tatcactgcg atcctgccag
     5941 tgaccgagtt tgaagaaggc gtgaaagtct tcatggcgac cgctaacggt accgtgaaga
     6001 aaactgtcct caccgagttc aaccgtctgc gtaccgccgg taaagtggcg atcaaactgg
     6061 ttgacggcga tgagctgatc ggcgttgacc tgaccagcgg cgaagacgaa gtaatgctgt
     6121 tctccgctga aggtaaagtg gtgcgcttta aagagtcttc tgtccgtgcg atgggctgca
     6181 acaccaccgg tgttcgcggt attcgcttag gtgaaggcga taaagtcgtc tctctgatcg
     6241 tgcctcgtgg cgatggcgca atcctcaccg caacgcaaaa cggttacggt aaacgtaccg
     6301 cagtggcgga atacccaacc aagtcgcgtg cgacgaaagg ggttatctcc atcaaggtta
     6361 ccgaacgtaa cggtttagtt gttggcgcgg tacaggtaga tgactgcgac cagatcatga
     6421 tgatcaccga tgccggtacg ctggtacgta ctcgcgtttc agaaatcagc atcgtgggcc
     6481 gtaacaccca gggcgtgatc ctcatccgta ctgcggaaga tgaaaacgta gtgggtctgc
     6541 aacgtgttgc tgaaccggtt gacgaggaag atctcgatac catcgacggc agtgccgcgg
     6601 aaggggacga tgaaatcgct ccggaagtgg acgttgacga cgagccagaa gaagaataat
     6661 tttacttctt catgccaaaa gggagctatc tcccttgttt gaattgaaaa gtccaggctg
     6721 caaagtctgg gcttttgtcg tattagggta cggtaaagtt tggctgtgcc cgtaaa
//
LOCUS       DADMHC010000200         6773 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.203, whole genome shotgun sequence.
ACCESSION   DADMHC010000200 DADMHC010000000
VERSION     DADMHC010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6773)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6773)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6773
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.203"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..1276)
                     /locus_tag="JNZ57_003463"
     CDS             complement(<1..1276)
                     /locus_tag="JNZ57_003463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416271.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HAY8829553.1"
                     /translation="MKRVSQMTALAMALGLACASSWAAELAKPLTLDQLQQQNGKAID
                     TRPSAFYNGWPQTLNGPSGHEPAALNLSASWLDKMSTEQLNAWIKQHNLKADAPVALY
                     GNDKDVDAVKTRLQKAGFTHISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEV
                     TAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKH
                     GIRHDTTVILYGRDVYAGARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKV
                     KAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGE
                     IAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRAS
                     ETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVA"
     gene            complement(1343..1996)
                     /locus_tag="JNZ57_003464"
     CDS             complement(1343..1996)
                     /locus_tag="JNZ57_003464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HAY8829554.1"
                     /translation="MLCVKNVSLRLPESRLLTNVNFTVDKGDIVTLMGPSGCGKSTLF
                     SWMIGALAGQFSCTGELWLNEQRIDMLPTAQRQIGILFQDALLFDQFSVGQNLLLALP
                     STLKGTARRNAVKDALDRAGLAETYHQDPATLSGGQRARVALLRALLAQPKALLLDEP
                     FSRLDVALRDNFRQWVFSEVRELAIPVVQVTHDLQDVPADSSVLDMAQWSENYNKLR"
     gene            complement(1996..3531)
                     /locus_tag="JNZ57_003465"
     CDS             complement(1996..3531)
                     /locus_tag="JNZ57_003465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY8829555.1"
                     /translation="MVTPLRYALIFLLWAMVAVIYAPLIPAALTLISPALSLTHWQAL
                     FADPQLPHALLATLVSTTIAAVGALLIALLVIVALWPGPKWQRMCARLPWLLAIPHVA
                     FATSALLLFADGGLLYDYFPYFTPPMDRFGIGLGLTLAVKESAFLLWILAAVLSEKRL
                     LQQVIVLDSLGYSRWQCLNWLLLPSVAPSLAMAMLAIVAWSLSVVDVAIILGPGNPPT
                     LAVISWQWLTQGDADQQTKGALASLLLMLLLAAYVLLSYLLWRSWRRTIPRVDGIRKP
                     ATPLLPGTTLASFLPLTGVLCVVLLAILADQSTINSEALINSLTMGLVATFIALLLLL
                     LWLEWGPQRRQLWLWLPILLPALPLVAGQYTLALWLNLDGSWTAVVWGHLLWVMPWML
                     FILQPAWQCIDSRLILIAQTLGWSRAKIFFYVKCPLMLRPVLIAFAVGFSVSIAQYMP
                     TLWLGAGRFPTLTTEAVALSSGGSNGILAAQALWQLLLPLIIFALTALVAKWVGYVRQ
                     GLR"
     gene            complement(3504..4670)
                     /locus_tag="JNZ57_003466"
     CDS             complement(3504..4670)
                     /locus_tag="JNZ57_003466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HAY8829556.1"
                     /translation="MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWSNAWGGDT
                     AINRYLDWVSGEMKTHYAINLKIVRLADAADAVKRIQTEAAAGRKTGGSVDLLWVNGE
                     NFRTLKEANLLQTGWAETLPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRD
                     VTPQPPQTPQALLEFAKANPGTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDA
                     TFARVTAPLWQYLDALHPYLWREGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKI
                     ASCDLPASSYSFGFREGMIGNVHFVTIPANANASAAAKVVANFLLSPDAQLRKADPVV
                     WGDPSVLDPQKLPDGQREILQSRMPQDLPPVLAEPHAGWVNALEQEWLRRYGTH"
     gene            complement(4680..5228)
                     /locus_tag="JNZ57_003467"
     CDS             complement(4680..5228)
                     /locus_tag="JNZ57_003467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HAY8829557.1"
                     /translation="MGLPPLSKIPFILRPQAWLHRRHYGEVLSPIRWWGRIPFIFYLV
                     SMFVGWLERKRSPLDPVVRSLVSARIAQMCLCEFCVDITSMKVAERTGSTDKLLAVAD
                     WRQSPLFSDEERLALEYAEAASVTPPTVDDALRTRLAAHFDAQALTELTALIGLQNLS
                     ARFNSAMDIPAQGLCRIPEKRS"
     gene            complement(5228..5935)
                     /locus_tag="JNZ57_003468"
     CDS             complement(5228..5935)
                     /locus_tag="JNZ57_003468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001697152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HAY8829558.1"
                     /translation="MMKMQSRKIWYYRITLIILLFAMLLAWALLPGVHEFINRSVAAF
                     AAVDQQGIERFIQSYGALAAVVSFLLMTLQAIAAPLPAFLITFANASLFGAFWGGLLS
                     WTSSMAGAALCFFIARVMGREVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPF
                     DPISYAAGLTSIRFRSFFIATGLGQLPATIVYSWAGSMLTGGTFWFVTGLFILFALTV
                     VIFMAKKIWLERQKRND"
     gene            complement(5950..6627)
                     /gene="ydjY"
                     /locus_tag="JNZ57_003469"
                     /pseudo
     CDS             complement(5950..6627)
                     /gene="ydjY"
                     /locus_tag="JNZ57_003469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416265.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="protein YdjY"
     gene            complement(6632..>6773)
                     /locus_tag="JNZ57_003470"
     CDS             complement(6632..>6773)
                     /locus_tag="JNZ57_003470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HAY8829559.1"
                     /translation="RFILQLCLAGLALFILVQLAKLYARHKHVDLSASRRSPLTHPKN
                     EG"
BASE COUNT         1629 a         1897 c         1765 g         1482 t
ORIGIN      
        1 ttgctaccgg attttttgga tcgctgctcc attcgtacca gccgccgtca tacacggaaa
       61 cattcttcca acccatggcg cgtgcgtaca taaaggtttc ggacgcgcgc cagccggtgc
      121 cgcagtagaa tgaaacttgc tgctctggtt tgatattcca cgctttccac atagcggtaa
      181 tatcatcggc gctgcgcatg gtgccatccg ggttatgaaa atcttccata tgcgtcgagt
      241 cgctaccagc gtgtccccaa cgtgctccgg ctatttcacc ttttggttta atatagctgt
      301 aaccgctggt cgtaccgata aattctggcc acgaacgaat gctcaccagc gatgcatcct
      361 ggcgatgcag cagtccacgg gcctgttcca tatcgagcat caactgcggt tgtgccggga
      421 tcttcacgcc gaaatccggt tccgctttca ctttcggtgg cgttcctcgc tcaacaggca
      481 gtcccgcgtc ggaccaggtt tgccagccgc catccagcag acgcacatct ttcacgcctg
      541 cgtagagcat aatttgcgcc acacgcgctc cagcgtatac gtcacgcccg tacagaatga
      601 ccgtggtgtc atggcgaatg ccgtgttttg ccagcatcgc ttttagttgt tcatcagaaa
      661 ctttgttcca cagcggttcg ctttccactt cgttggtatc gatgtagtca gcaccgggaa
      721 tatggctgat aaggtaaagc ttaggagcgc cccaggccgc ttcaatgact ttccagtcac
      781 cggcaggttt cgccgtaacc tctttacctt gttgcaggtc gtgcagccat tgcggataaa
      841 ccagctgctc aaagtgcggc agtttttgta gacgggaagg ttcgcttagc gcgtcactca
      901 gaatggagat atgcgtaaaa cctgcttttt gcagtcgcgt tttgacggcg tcgacatctt
      961 tgtcattacc gtacagcgcc accggggcat cggctttcag gttatgttgc ttgatccacg
     1021 cgttgagctg ttcggtgctc attttgtcga gccagctggc agagaggttt aaggcggcag
     1081 gttcatgacc agaagggcca tttaaggttt gtggccagcc gttataaaac gcgctggggc
     1141 gagtatctat cgctttgcca ttttgttgtt gaagctggtc aagtgtaaga ggcttcgcca
     1201 gttcagcggc ccacgaagaa gcgcaagcca gccctaacgc cattgccagc gcggtcattt
     1261 gagaaacacg tttcatcgaa aatcccgaca ttgtagtttt gagtgcgcca ttctgaactg
     1321 acgcattgag aaaaactttg cgttatcgca gtttgttgta attttctgac cactgcgcca
     1381 tatccagaac agaactatca gcaggaacat cctggagatc gtgcgttacc tgaacgacgg
     1441 ggatcgccag ttcgcgaact tcgctgaaca cccactggcg aaaattatcg cgcagagcca
     1501 catcaagacg gctgaatggc tcatccagga gtaacgcttt tggctgagcg agaagggcgc
     1561 gcagcagggc cacccgcgct cgctgaccgc ctgataatgt cgcagggtcc tggtgataag
     1621 tttcagccag tcccgctcga tcaagcgcgt ctttcacggc attgcgcctg gcagtcccct
     1681 tgagcgtcga cggtagcgcc agcagtaaat tttgcccgac gctgaactgg tcaaataaca
     1741 gtgcatcctg gaaaagaatg ccaatctgac gctgtgcggt gggtagcatg tcaatccgtt
     1801 gctcattgag ccatagctca cctgtacaag aaaactgtcc agccagtgca ccaatcatcc
     1861 atgaaaacag agtggatttt ccacagccag acggccccat taacgtgacg atgtcacctt
     1921 tatcaaccgt aaagttaacg tttgtcagca agcggctttc tggtaaacgt agcgaaacat
     1981 ttttcacgca gagcattagc ggagtccttg tctgacataa cctacccatt ttgcgactaa
     2041 cgcggtcagg gcaaaaataa taagcggtaa caacagttgc cataaagcct gggcggcgag
     2101 aataccgttg ctgccgccgc tgcttaatgc caccgcctca gtggtgagcg tcggaaaacg
     2161 ccccgcgccc agccacagcg tcggcatata ctgcgcaata ctgactgaaa atcccaccgc
     2221 gaaggcaatc agcacagggc gcaacatgag tgggcatttc acgtaaaaga agattttggc
     2281 ccgcgaccag cccagtgttt gcgcaatcaa aattaaccgt gaatcaatgc actgccaggc
     2341 gggttgcagg ataaacagca tccacggcat tacccacagc agatgccccc agaccaccgc
     2401 cgtccagctt ccatccaggt tcagccatag cgccagcgtg tactggcccg ccaccagtgg
     2461 cagagcgggc aatagaatgg gcaaccatag ccacaactgg cgacgctgtg gcccccattc
     2521 cagccacagc agtaacagga gcaaagcgat gaatgttgct accagcccca ttgtcagact
     2581 gttgatgagt gcttcactat tgatcgtcga ctgatccgcg aggatcgcca gcagaaccac
     2641 acacagcaca ccggttaagg gtaaaaaact cgccagcgta gtgcctggta ataaaggtgt
     2701 ggcaggcttg cgaatgccat ctacgcgggg aatagtgcgc cgccagctgc gccatagcag
     2761 atagctcagc aaaacgtagg cggcgagtaa cagcatcagc agcagactgg cgagtgcgcc
     2821 tttcgtttgt tgatccgcgt cgccctgagt taaccactgc cagctaatta ctgccagcgt
     2881 cggtggatta cctggcccaa gaataatcgc cacatccacg accgaaagcg accaggcaac
     2941 aatcgccagc atcgccattg ccagcgaagg cgcgacggag ggcaacagca gccagttcag
     3001 gcattgccag cggctgtagc ccagcgaatc cagcacaatg acctgctgca acagccgttt
     3061 ttcgctcaat actgccgcta agatccacag cagaaatgcg ctttctttca ctgcaagggt
     3121 gaggcccaga ccgatgccaa atcggtccat tggcggagtg aaatacggga aatagtcata
     3181 tagcagccct ccgtcagcaa agagcagcag ggcgctggtg gcaaaagcca catggggaat
     3241 ggcgagcagc cacggcagac gggcgcacat acgctgccat ttcggcccag gccatagcgc
     3301 cacaatcacc agcagggcaa tcaacaatgc cccgaccgcc gcgatggttg tcgacaccag
     3361 cgttgccagt aatgcatgcg gtaactgtgg atcggcaaat aacgcctgcc agtgtgtcaa
     3421 cgacaacgca ggcgatatca gcgtgagagc tgccgggatc agcggtgcat aaatcaccgc
     3481 caccatcgcc cacagcaaaa agattaatgc gtaccgtaac ggcgtaacca ttcttgttcc
     3541 agtgcattca cccatcctgc gtgcggttca gccagtaccg gcggcagatc ctgcggcatt
     3601 cttgattgca atatttcgcg ctgcccgtca ggcagttttt gcggatcgag aacagaagga
     3661 tcgccccaga caacgggatc tgctttacgc agttgcgcat cgggtgagag cagaaaattg
     3721 gcaactacct tcgccgcagc actggcattc gcgttggctg gaatggtgac gaaatgcacg
     3781 ttgccaatca tcccctcgcg aaagccaaaa ctgtaactgc ttgccggcaa atcgcagctg
     3841 gcgatttttt gctgcgcatg cgcggggtta aaggtcagcg acaggcgcaa tgtgccggct
     3901 ttcagcagag catccatccg cgcgggcgaa ggcgggaaat cctttccttc gcgccacaaa
     3961 tacggatgca gtgcatcaag atattgccac aagggcgcag tgacacgggc gaaagtcgca
     4021 tcgtccggcg cttcttttaa tgcggcggga tctggcgtca gcataatcag caactgttca
     4081 agaaacgccg tgccggtaaa gtccggtggg cgcggataag taaccgtgcc gggattggct
     4141 ttagcaaact ccagtaaggc ttgcggcgtt tgtggtggct gtggcgtaac atcgcggcgg
     4201 gcgataaacg tcagttgtgc gccgccccag ggcgattccg caccttgtgt cggcactgaa
     4261 aaatcttccc gcaccggcag ctgtgtgtcg acatagcgcc agttgggcag agtctccgcc
     4321 cagcccgttt gtaataaatt ggcctctttt aaggtgcgga agttttcgcc gttcacccag
     4381 agcagatcca ccgagccgcc cgttttacga ccggcagcag cttcggtctg aatgcgcttc
     4441 accgcgtctg cggcatccgc gagacgaaca atcttcaggt ttatagcgta atgggttttc
     4501 atctcgccgc taacccagtc gagatagcgg ttaattgcgg tatcgccgcc ccaggcgtta
     4561 gaccagacgg tttgcccttt ggcctcattt ttaatttcct gccagtcact ggcatgtgtt
     4621 gccaaagaaa acagcgataa caatcccagc aaccacccac aatggcgcat cttctctcct
     4681 taagaacgtt tttccggaat acggcacagc ccctgagcgg gaatgtccat ggcagaatta
     4741 aaacgagccg acaggttttg caggccgatc aatgccgtca gttcggtgag cgcctgagcg
     4801 tcaaaatgcg cagccagtcg ggtacgcagg gcatcatcga ctgttggcgg tgtgacgctt
     4861 gcggcttcgg cgtactccag cgccagccgt tcttcatcgc taaagagcgg gctttgccgc
     4921 cagtcagcca ctgccagcag tttatcggtg ctgccggtac gctcggcgac tttcatactg
     4981 gtgatatcca cacaaaactc acacaggcac atttgcgcaa tgcgcgcgct gacaagcgat
     5041 cgcactaccg gatcgagcgg tgagcgtttg cgctccagcc acccaacaaa cattgacacc
     5101 aaataaaaga taaacgggat ccgcccccac cagcgaatcg ggcttagcac ctcgccgtaa
     5161 tggcgacgat gcagccacgc ctgcggacgt aaaatgaaag gaattttgct aagcggcggt
     5221 aaacccatca gtcattcctc ttctggcgct caagccatat tttcttcgcc ataaaaatca
     5281 ccacggtcag ggcaaacaga ataaacagtc cggtgacaaa ccagaaagta ccgcctgtta
     5341 acatgctgcc cgcccaggaa taaacaatag tcgccggtaa ttgaccaagc ccggtggcga
     5401 taaaaaacga gcgaaaacgt attgaagtca gaccggcagc atagctgatt ggatcgaaag
     5461 ggacaaaagg caataaccga cagaccagga tggtgtgttt gccgtagcga gtgaaaaagc
     5521 cgtccatact gtcaagcacg gttttgccgg ttaatttttc caccacttcg cggcccatca
     5581 ctctggcgat aaaaaagcac agcgccgcgc cggccatcga actggtccac gacagcaagc
     5641 cgccccagaa cgcgccaaac agcgacgcat tggcaaaggt gatcaaaaac gcaggtagcg
     5701 gtgcagcaat ggcctgtaaa gtcatcaaca agaacgagac aactgccgcc agtgcgccgt
     5761 aagactgaat aaagcgttct ataccctgtt ggtccacggc ggcaaacgcc gcaacgctgc
     5821 gattgataaa ctcatggacg ccgggaagca gcgcccatgc gagcagcata gcgaacaaca
     5881 ggatgatgag ggttatacgg tagtaccaga ttttacgcga ttgcatcttc atcatccttt
     5941 atcctggctt tattcggtga ttttaaaggt aaccgttgcc agcgtgttat ccgccgggag
     6001 aactgaggca ttgcctttga atttcacttc gccgcgtttt tccaccgcac cataagtgta
     6061 tgttgcattg ctgacgatgc cgaccgggca gctatccaga cacaccagtc aacccgtttt
     6121 cttctcttct gctgccgtta aattaccgcc aaagcgcatg tccagtttct tgccattact
     6181 gtcaacaatc acttcatcga aggaatacgc ttttgccgcc ccttgccagt tgaccgaaat
     6241 atccagtttg ctgcctgtga catgagtcgt ttctttatta tccatcgtca tgttttcgcc
     6301 cggcgtacca cctgcctctt tcagggcttc ataaaatgct ttcggggtcg cataagccat
     6361 aaacagcgat ttatgtccgt tggagccatc tttaaacaca ataccgtgac gagtgtcgtc
     6421 ggtgaggaaa cgaccattaa tttgcaccag catggttacc gtatggttat tggcatcgac
     6481 gcgcagcggt tggctgttcg aaagtccgtc gtattccact tttgccgccg cattctcttt
     6541 ttgatcgcag ccgctaagcc cggcaacagc cagtaagcag agtgcagcca gtcctttttt
     6601 ccatgacact gaataatgtt gcgacatcgt tctatccttc attttttggg tgagtaagcg
     6661 ggctgcggcg cgaagcagac agatccacat gtttgtgtcg ggcgtagagt tttgcgagct
     6721 ggacgagaat aaacagcgcc aggcccgcca gacagagttg taaaataaag cgc
//
LOCUS       DADMHC010000201         6712 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.204, whole genome shotgun sequence.
ACCESSION   DADMHC010000201 DADMHC010000000
VERSION     DADMHC010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6712)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6712)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6712
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.204"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            528..1304
                     /gene="exuR"
                     /locus_tag="JNZ57_003471"
     CDS             528..1304
                     /gene="exuR"
                     /locus_tag="JNZ57_003471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ExuR"
                     /protein_id="HAY8829560.1"
                     /translation="MEITEPRRLYQQLAADLKERIEQGVYLVGDKLPAERFIADEKNV
                     SRTVVREAIIMLEVEGYVEVRKGSGIHVVSNQPRHQQAADNNMEFANYGPFELLQARQ
                     LIESNIAEFAATQVTKQDIMKLMAIQEQARGEQCFRDSEWDLQFHIQVALATQNSALA
                     AIVEKMWTQRSHNPYWKKLHEHIDSRTVDNWCDDHDQILKALIRKDPHAAKLAMWQHL
                     ENTKIMLFNETSEDFEFNADRYLFAENPVVHLDTATSGSK"
     gene            1649..2311
                     /locus_tag="JNZ57_003472"
     CDS             1649..2311
                     /locus_tag="JNZ57_003472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY8829561.1"
                     /translation="MELLTQLLQALWAQDFETLANPSMIGMLYFVLFVILFLENGLLP
                     AAFLPGDSLLVLVGVLIAKGAMGYPQTILLLTVAASLGCWVSYIQGRWLGNTRTVQNW
                     LSHLPAHYHQRAHHLFHKHGLSALLIGRFIAFVRTLLPTIAGLSGLNNARFQFFNWMS
                     GLLWVLILTTLGYMLGKTPVFLKYEDQLMSCLMLLPVVLLVFGLAGSLVVLWKKKYGN
                     RG"
     gene            2315..2698
                     /gene="mzrA"
                     /locus_tag="JNZ57_003473"
     CDS             2315..2698
                     /gene="mzrA"
                     /locus_tag="JNZ57_003473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EnvZ/OmpR regulon moderator MzrA"
                     /protein_id="HAY8829562.1"
                     /translation="MQIPRMSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVH
                     QGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYI
                     IAQQDNNSQAMQWLTRLRDNSHRFG"
     gene            2845..3213
                     /locus_tag="JNZ57_003474"
     CDS             2845..3213
                     /locus_tag="JNZ57_003474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417568.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1090 domain-containing protein"
                     /protein_id="HAY8829563.1"
                     /translation="MKYRIALAVSLFALSAGSYATTLCQEKEQNILKEISYAEKHQNQ
                     NRIDGLNKALSEVRANCSDSQLRADHHKKIAKQKDEVAERQQDLAEAKQKGDADKIAK
                     RERKLAEAQEELKKLEARDY"
     gene            3251..3556
                     /locus_tag="JNZ57_003475"
     CDS             3251..3556
                     /locus_tag="JNZ57_003475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF883 domain-containing protein"
                     /protein_id="HAY8829564.1"
                     /translation="MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAE
                     QALKQSRYRLGETGDAIAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR"
     gene            3559..3963
                     /locus_tag="JNZ57_003476"
     CDS             3559..3963
                     /locus_tag="JNZ57_003476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829565.1"
                     /translation="MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEK
                     ANLFQLLLMLGLTMLFAAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIW
                     TLRKSRKSTLLRHTRHELANDRQLLEEESREQ"
     gene            3953..4252
                     /locus_tag="JNZ57_003477"
     CDS             3953..4252
                     /locus_tag="JNZ57_003477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829566.1"
                     /translation="MSSKVERERRKAQLLSQIQQQRLDLSASRREWLEATGAYDRRWN
                     MLLSLRSWALVGSSVMAIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG"
     gene            4348..4830
                     /locus_tag="JNZ57_003478"
     CDS             4348..4830
                     /locus_tag="JNZ57_003478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HAY8829567.1"
                     /translation="MILSIDSNDANTAPLHKKTISSLSGAVESMMKKLEDVGVLVARI
                     LMPILFITAGWGKITAYSGTQQYMEAMGVPGFMLPLVILLEFGGGLAILFGFLTRTTA
                     LFTAGFTLLTAFLFHSKFAEGVNSLMFMKNLTISGGFLLLAITGPGAYSIDRLLNKKW
                     "
     gene            4900..5886
                     /locus_tag="JNZ57_003479"
     CDS             4900..5886
                     /locus_tag="JNZ57_003479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708909.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HAY8829568.1"
                     /translation="MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTADGAPGPTG
                     TGGFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSF
                     PGATGDTLYQHEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAF
                     DALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQQAYDEAVAKVFESLA
                     RLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRD
                     IYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRDVRFG"
     gene            6179..6544
                     /locus_tag="JNZ57_003480"
     CDS             6179..6544
                     /locus_tag="JNZ57_003480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HAY8829569.1"
                     /translation="MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKML
                     GWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFN
                     CQAGTPGENRFGPDPKLEP"
BASE COUNT         1740 a         1595 c         1634 g         1743 t
ORIGIN      
        1 atttaatctc aacttcattt tcctgaggcg tagatggatt atcgatacgg aatactgtcg
       61 ccttgatgta ctgaacttca ttacttttag atattacgcg aacgttgcct tcatcctgac
      121 tattaatgga aacagccata ggataaacag tcatatttga ctgtgccaaa aaaggagcga
      181 acacgaataa aagcggcgta agccgtgata agagattaat tttcgccacc atataaattt
      241 gatcttacaa tattgtttcc aaaaagttgg tgtattagag atgtagattt attgtaagtc
      301 aatataaaaa agcattttta gttaatatta aatttaaagg ctgggaatta acttactgaa
      361 atttagtagt tttcacaatg acgatactta ttttttagga atttataaat attcacaata
      421 ttaattcaat acattaattc aatcaccaaa tttatatatg accaatggca tacccatgaa
      481 taaagtggta tgataacttc gtccgcattc cactccggga gacgcatatg gaaatcactg
      541 aaccacgccg tttgtatcaa caacttgccg ctgacctgaa agagcgcatt gaacagggcg
      601 tctatctggt gggtgataaa ctgcctgccg aacgctttat tgccgatgaa aagaacgtca
      661 gccgaacggt agttcgtgaa gccatcatca tgctggaagt tgaaggctat gtggaggtgc
      721 gtaaaggttc aggtattcat gtggtttcca accagccgcg ccatcagcag gcggctgaca
      781 ataatatgga attcgccaat tacggtccgt ttgagttgct tcaggctcgc cagctcatcg
      841 aaagtaatat tgccgagttc gcggcaactc aggtaacgaa acaagacatc atgaaactga
      901 tggccattca ggaacaggcg cgcggcgaac aatgcttccg tgattccgag tgggatttac
      961 agttccacat tcaggtagcc ctggcgacgc agaactccgc cctggcggcc atcgttgaaa
     1021 aaatgtggac ccagcgtagc cataacccgt actggaaaaa actacacgaa cacattgatt
     1081 cccgtaccgt tgataactgg tgtgatgacc acgatcaaat tctcaaggcg ttaattcgca
     1141 aagatcccca tgctgctaag ctggcaatgt ggcagcatct ggaaaacacc aaaatcatgt
     1201 tatttaacga aaccagcgag gatttcgagt tcaatgccga ccgctatcta ttcgccgaaa
     1261 acccggtagt gcatctcgat acggccacca gtggcagtaa atgaaactcc tgtccgacag
     1321 gcgctgcgac gcgcctgttc gcttcgtcgg taagcgaaaa gtataaagtg tcagcctgtg
     1381 taaatcctct cgccaccctc ccctgcattc agcaaaatca gactccacgg acatgtaatt
     1441 ttgataacga acaacgttga cctttgttac aattagattc aatttgaatt tatgtttttg
     1501 aatgctttct tatctcacga tttaacagga aatagttcag gctgtgttga tgtatcaaac
     1561 ccgcagaaca taccaaaaca gcaataacat tgcggtagtg catcttttaa aaccagcgtg
     1621 gcgttaaccg attcaccagg aataatgaat ggaacttttg acccaattgc tgcaagccct
     1681 gtgggcgcag gattttgaaa ccctggccaa tccatcgatg attggcatgt tgtattttgt
     1741 cttgtttgta attttgttcc ttgaaaacgg cttgcttcca gcggcctttt taccgggcga
     1801 cagtttactg gtattggtcg gcgtgttgat tgcgaaaggc gcgatgggtt acccgcaaac
     1861 gattctgctg ctgaccgttg ccgccagcct cggctgctgg gtcagctata ttcaggggcg
     1921 atggctgggc aatacccgca ccgtacaaaa ctggctatct catttacccg cgcattatca
     1981 tcaacgcgca caccatcttt ttcataaaca cggtttatcg gcgctgttaa ttggtcgctt
     2041 tattgcgttt gtcagaacac tgctgccgac gattgccggg ttatcagggc tgaataacgc
     2101 gcgctttcag tttttcaact ggatgagcgg tctgctgtgg gtattgatcc tgacaactct
     2161 gggttacatg ctcggcaaaa cgccggtatt tttaaagtac gaggaccagc tgatgtcatg
     2221 cctgatgctg ctcccggtgg tgctgctggt gtttggcctg gcaggttctc tggtcgtgtt
     2281 atggaaaaag aaatatggaa atcgggggta agggatgcaa atacctcgca tgtcgcttcg
     2341 ccagctagcc tggtccggca ctgttttact tctggtcggc acgctgttgc tggcctggtc
     2401 cgcggttcgc cagcaagagt ctacgctggc gattcgtgcc gttcatcaag gcacaacgat
     2461 gccagacggt ttttcgatct ggcatcacct tgacgctcat ggcattcctt tcaaaagtat
     2521 cacccccaaa aacgacactc tgttaattac atttgactcc agcgaccaga gcgccgccgc
     2581 aaaagcggtc ctcgacagaa cattgcccca tggctacatc attgcgcagc aggacaataa
     2641 cagtcaggct atgcagtggc tgacccggtt acgggataac tctcatcgct tcggataact
     2701 tcctgttatc cgaaacatat cactcacttt ggtgatttca ccgtaactgt ctatgattaa
     2761 tgaggcggtg gttaacacta ccgcttcgtt gtctggacaa tcgttccttt gtaataggtc
     2821 cgaatcacaa tggaaggttc aagaatgaaa taccgcatcg ctttagctgt ttctctcttt
     2881 gctcttagtg ccggtagtta tgccactacc ctgtgtcagg aaaaggagca aaatatcctt
     2941 aaggagatca gctatgccga aaaacaccaa aaccagaatc gtattgacgg tctgaataaa
     3001 gccctgagtg aagtccgggc caactgttca gatagccagc tgcgtgccga tcatcacaag
     3061 aaaatcgcaa agcagaaaga tgaggtggcg gaacgccagc aagatttagc cgaggcgaag
     3121 caaaaaggcg atgccgataa gattgccaaa cgcgaacgga aactggcaga agcgcaggaa
     3181 gagctgaaaa agctggaagc gcgcgactac taactcacaa tagtcactac ttactcacct
     3241 ggagaaaact atgtcgaaag aacacactac ggaacatctg cgtgctgagt tgaaatccct
     3301 ttccgatacg ctggaagagg tgcttagctc atctggcgag aagtcgaaag aagagttgag
     3361 taagattcgt agcaaagcgg agcaggcact gaaacagagc cgttatcgcc tgggtgaaac
     3421 cggtgatgcc atcgccaaac aaacccgtgt cgcggcggcg cgtgctgatg agtatgtgcg
     3481 tgaaaatccg tggaccggcg tgggaattgg cgctgcaatc ggtgtagtgc tcggcgttct
     3541 gctgtcgcgt cgttaattat ggcggacact catcacgcgc aagggcccgg taaaagcgtt
     3601 ctgggcatcg ggcagcgaat tgtttccatc atggttgaaa tggtggaaac acgtctgcgg
     3661 ctggcggtgg tggagctgga agaggaaaaa gctaatctct ttcaactttt actgatgctg
     3721 ggcctgacga tgcttttcgc tgcatttggt cttatgagcc tgatggtgct aattatttgg
     3781 gcggttgatc cgcaatatcg cctgaatgcg atgattgcca ccaccgtggt gttgctgcta
     3841 ctggcactga tcggcggtat ctggacgtta cgtaaatcgc gtaaatccac cttgctgcgc
     3901 catacacgcc atgagctggc aaacgatcgg caactgctcg aggaggagtc ccgtgagcag
     3961 taaagtcgaa cgtgaacgac gtaaggcgca actgcttagc cagatccagc aacaacggct
     4021 ggatctttcc gccagtcgtc gtgaatggct ggaggcaaca ggcgcttacg atcgtcgctg
     4081 gaatatgctg ctaagtctgc gctcctgggc gctggttggc agtagcgtga tggcgatctg
     4141 gacgattcgc catcctaata tgctggtccg ctgggccaga cgcggttttg gcgtatggag
     4201 cgcctggcgt ctggttaaaa cgaccctcaa gcagcaacag cttcgcggtt aacttccctc
     4261 tggccggagc cattccggcc ttatccctca aattttttga agatttttga cagttttcct
     4321 tgctaacaat catcattcac cacgtttatg attctctcca tcgacagcaa cgacgctaat
     4381 accgcgccct tgcacaaaaa aacaatcagc agcctgagtg gcgcagtgga gagtatgatg
     4441 aaaaaattag aagatgttgg tgtactggta gcgcgcattt taatgccgat tctgtttatt
     4501 accgcaggct ggggaaaaat caccgcttac tctggtaccc aacaatatat ggaagcaatg
     4561 ggtgtcccgg gttttatgct gccgctggtg attctgcttg agttcggtgg tggtctggct
     4621 atcctgttcg gtttcctgac tcgcaccaca gccctgttta ctgcgggctt tacgctgctg
     4681 acggcatttt tatttcacag caagtttgct gaaggcgtca actcgctgat gttcatgaaa
     4741 aacctgacaa tttctggcgg attcctgctg ctggcaatta ccggtccggg cgcgtatagc
     4801 atcgaccgcc tgctgaataa aaagtggtaa gcacgcgcta tacttaacga taaaaaacga
     4861 ggaggaagct cctcgttttt gctattggag gagagaaaaa tggggcaact gattgacggc
     4921 gtctggcatg acacctggta cgataccaaa tctaccggcg gtaaatttca acgttcagct
     4981 tccgcatttc gtaactggct cactgccgat ggcgcacctg gccccactgg cacaggcggt
     5041 tttatcgcag agaaagatcg ttatcatctc tatgtttcac tcgcctgccc gtgggcgcac
     5101 cgcacgctga tcatgcgcaa actcaaagga ctggaaccgt ttatttccgt ttccgtagtg
     5161 aacccgctga tgctggaaaa cggctggacc tttgatgaca gttttccggg agcaaccgga
     5221 gatacgctct atcaacatga atttctgtat cagctttatc tccacgccga tccacactac
     5281 agcggacgag ttactgttcc cgtgctgtgg gacaaaaaga accacaccat tgtcagcaac
     5341 gaatcagcag aaatcatccg catgttcaat accgcgtttg atgcgctggg cgcaaaagcg
     5401 ggtgattact acccaccagc cctgcaaacg aaaattgacg aacttaacgg ctggatttat
     5461 gacaccgtta acaacggcgt gtataaagct ggttttgcca ccagccagca agcctacgac
     5521 gaggcggtgg cgaaagtgtt tgaatcgctg gcgcgactgg agcagatttt aggccagcat
     5581 cgttacctga ccggcaacca gctaaccgaa gccgatattc gcctgtggac tacgctggtg
     5641 cgttttgatc cagtgtatgt gacccacttc aagtgtgata agcaccgcat cagcgattac
     5701 ctgaatctgt atggcttcct gcgcgatatc taccagatgc cggggatcgc cgaaactgtc
     5761 aatttcgatc acatccgtaa tcattacttc cgcagccata agaccatcaa ccctacgggg
     5821 attatttcaa ttggtccgtg gcaggatctc gatgaaccgc atggacgaga tgttcgcttc
     5881 ggttaaaaaa aggcacctta cgaggtgcct ctgataatta gctaagtgca tgttgttcat
     5941 gtcggatgcg gcgtgaacgc cttatcaaac ctacacaacg tttatattca atatgttaaa
     6001 atgaccgcgt aggccagata agcgtagcgc atctggcgat tttgcgcttg tcatcagtct
     6061 tagcgcacct tcacggcact ttattaattc cttgaacgaa tatttactgc catttcattc
     6121 acgtctattc ttaatttgct gctttaaaaa caagtgattg agcaaaattg aggcaaaaat
     6181 ggactggtat ctgaaagtac taaaaaatta tgtcggtttc cggggtcgtg cgcggcgcaa
     6241 agagtactgg atgtttattc tggtcaacat catctttacg ttcgtgctgg ggctgctgga
     6301 taaaatgtta ggctggcaac gcgccggtgg cgaaggcatc ctgacgacaa tctacggtat
     6361 tctggtgttt ttaccgtggt gggcggttca gttccgccgc ctgcacgaca ccgaccgctc
     6421 ggcgtggtgg gcactgttgt tcttaatccc gtttatcggc tggcttatta tcatcgtctt
     6481 taactgccag gcgggtacgc caggcgaaaa ccgctttgga ccagatccga aactggaacc
     6541 ttaaaacaaa tctgctcgcc ggatgtctga ctcatccggc ttttatcatc atgttgatga
     6601 atgaataatt tactaatgtt tatttaaaat atttcaatgt cgttatataa attacctata
     6661 aaaaacaacc atgtatttat cttaaatatc aaaaccttta taacatccga aa
//
LOCUS       DADMHC010000202         6684 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.205, whole genome shotgun sequence.
ACCESSION   DADMHC010000202 DADMHC010000000
VERSION     DADMHC010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6684)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6684)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6684
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.205"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            199..939
                     /locus_tag="JNZ57_003481"
     CDS             199..939
                     /locus_tag="JNZ57_003481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HAY8829570.1"
                     /translation="MRKIALILAMLLIPCVSFADLLGSSSSTTPVSKEYKQQLMGSPV
                     YIQIFKEERTLDLYVKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQ
                     LKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTG
                     ALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVN
                     GRYVVSKPLSHEVVQPQLASNYTLPEAK"
     gene            complement(910..1677)
                     /locus_tag="JNZ57_003482"
     CDS             complement(910..1677)
                     /locus_tag="JNZ57_003482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HAY8829571.1"
                     /translation="MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGK
                     GCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRN
                     WTYAHNGQLTGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIA
                     SLADELRQKGVFNMLLSDGRYVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTT
                     PNDVVTVIATQPLTGNETWQKIMPGEWRLFCLGERVV"
     gene            complement(1883..2461)
                     /gene="lpcA"
                     /locus_tag="JNZ57_003483"
     CDS             complement(1883..2461)
                     /gene="lpcA"
                     /locus_tag="JNZ57_003483"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017458774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HAY8829572.1"
                     /translation="MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAG
                     GKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFS
                     RYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEI
                     RVPHFGYADRIQEIHIKVIHILIQLIEKEMVK"
     gene            2701..5145
                     /locus_tag="JNZ57_003484"
     CDS             2701..5145
                     /locus_tag="JNZ57_003484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414756.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HAY8829573.1"
                     /translation="MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWS
                     AWVLVPLAIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDL
                     FQGKPDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLK
                     EHRFFAMIIKKEYGGLEFSAYAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGT
                     DEQKDHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGIVCMGEWQGQQVLGMRLTWN
                     KRYITLAPIATVLGLAFKLSDPEKLLGGAEDLGITCALIPTTTPGVEIGRRHFPLNVP
                     FQNGPTRGKDVFVPIDYIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALA
                     TGAYAHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKPAVLSAI
                     VKYHCTHRGQQSIIDAMDITGGKGIMLGQSNFLARAYQGAPIAITVEGANILTRSMMI
                     FGQGAIRCHPYVLEEMEAAKNNDVNAFDKLLFKHIGHVGSNKVRSFWLGLTRGLTSST
                     PTGDATKRYYQHLNRLSANLALLSDVSMAVLGGSLKRRERISARLGDILSQLYLASAV
                     LKRYDDEGRNEADLPLVHWGVQDALYQAEQAMDDLLQNFPNRVVAGLLNVVIFPTGRH
                     YLAPSDKLDHKVAKILQVPNATRSRIGRGQYLMPSEHNPVGLLEEALVDVIAADPIHQ
                     RICKELGKNLPFTRLDELAHNALAKGLIDKDEAAILVKAEESRLRSINVDDFDPEELA
                     TKPVKLPEKVRKVEAA"
     gene            complement(5188..5661)
                     /gene="ivy"
                     /locus_tag="JNZ57_003485"
     CDS             complement(5188..5661)
                     /gene="ivy"
                     /locus_tag="JNZ57_003485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C-lysozyme inhibitor"
                     /protein_id="HAY8829574.1"
                     /translation="MGRISSGGMMFKAITTVAALVIATSAMAQDDLTISSLAKGETTK
                     AAFNQMVQGHKLPAWVMKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEK
                     SNQMTGLFSTIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK"
     gene            5815..6585
                     /gene="yafV"
                     /locus_tag="JNZ57_003486"
     CDS             5815..6585
                     /gene="yafV"
                     /locus_tag="JNZ57_003486"
                     /EC_number="3.5.1.111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutaramate amidase"
                     /protein_id="HAY8829575.1"
                     /translation="MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMF
                     TSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTV
                     HFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLAI
                     YVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIA
                     TADAHQATRIDAELSMMALREYREKFPAWQDADEFRLR"
BASE COUNT         1543 a         1704 c         1821 g         1616 t
ORIGIN      
        1 atcttaggaa ataaatgata catgcgcttt tcggactatt gaaaactgcc cctgtgctaa
       61 atttgtaaac cctgcgccga caggcttgcg taaaactctt ttggtgataa tgtgagcctt
      121 ccaaatccag actattccga tttgggatcc attttgccgt cctggcgtgt gtaaccgttt
      181 tatcaaggaa taagcagtat gcgtaaaatc gcattaattc ttgcgatgtt gttgatcccg
      241 tgcgtttcgt ttgccgattt gctgggcagc agtagctcga ccacgccagt gagcaaagag
      301 tataagcagc agttgatggg atcccctgtc tacatccaga tcttcaagga agaacgtacg
      361 ctcgatctct acgtcaaaat gggcgagcaa tatcagctgc tcgacagtta taaaatctgt
      421 aaatattccg gcggcttagg gccaaaacag cgtcagggcg atttcaaaag cccggaaggg
      481 ttttatagcg tccagcgtaa tcagttaaaa ccagacagcc gttactacaa agcgattaat
      541 attggtttcc ccaatgccta tgaccgtgcg catggttatg aagggaaata cctgatgatc
      601 cacggcgatt gtgtttccat cggctgctac gcaatgacca atcagggtat tgatgagatc
      661 ttccagttcg ttactggtgc gctggtgttt ggtcagccga gcgtgcaagt gagtatttac
      721 ccgttccgca tgaccgacgc caatatgaag cgccataaat attccaactt taaggacttc
      781 tgggagcaac tgaagccggg ttacgactac tttgagcaaa cccgtaagcc accgaccgtt
      841 tctgtggtca atggtcgtta cgtggtcagc aagccgttaa gccacgaagt tgtgcagcca
      901 caactggcat caaactacac gctccccgag gcaaaataag cgccattcgc ctggcataat
      961 cttttgccag gtttcattgc ccgtcagcgg ctgtgtcgca atcaccgtga ccacatcatt
     1021 cggtgtggtc tgcgagctga agtcgatttc tacatcctga tccagcagcg ttgccacgcc
     1081 aaacggtgcg cggcgggtga tccagtgcag attcgtcgag caatacgcca ttacatagcg
     1141 cccatccgaa agcagcatgt tgaaaacgcc cttctgccgc agttcgtccg ccagtgaagc
     1201 gatatattta aacactgctg ccatgttgcc cggcgtgcgc gggtaacgct gcgttaattt
     1261 atgcagcagc cagcagaagg ctttttcgct gtcggtttcg cctaccgggc ggaagttgcc
     1321 ggtttccagt gatttgtagc ccgtcagttg tccgttatgg gcataagtcc agttacgccc
     1381 ccataactcg cgggtaaatg ggtgagtatt ttccaacgcc acctcgcccc gattagcctg
     1441 gcgaatatga gccaccaccg aacaggattt tatcgggtag tcctggacaa gtttggcgat
     1501 gggggaatta aagctgggtt gtggatcttt aaatgtgcga cagcctttac cttcgtaaaa
     1561 ggtaatgccc cagccatctt tatgtggccc ggttccacca ccacgctgta caagtccggt
     1621 gaaactaaag cagatatcgg tagggacgtt ggcgctcatc ccgagcaatt cgcacatggg
     1681 taacctccac aacagcggga gcgcatggcc cccggcgaag attgatttaa gaattttcag
     1741 gtcggatgcg gcgtaaacga attattcggc ctacggttcg cgtacagatt tgtaggcatg
     1801 ataagacgcg tcagcatcgc atcaggcatc agcgcacaag tgccggatgc ggcgtaaacg
     1861 ccttatccgg cctacgccag acttacttaa ccatctcttt ttcaattaac tggatcagga
     1921 tatggatcac tttaatgtga atctcctgaa tgcggtcggc ataaccaaag tgcggtacgc
     1981 gaatttcgat atccgccgtg ccagccattt tgccgccgtc tttaccggtc agggtgatca
     2041 ctttcatccc cttctcacgc gccgctgcga tcgctttgat cacgtttgca gagttaccgg
     2101 aggtggagat ccccagcagt acatcgcctt cgcgacctac cgcttcaacg tagcgggaga
     2161 aaatatcatt gaaaccgaaa tcattaccga cgcaggaaat atgactaacg tcagaaatag
     2221 caatcgccgg gtagcccgga cggttttcac ggtagcgacc ggtcaactct tcggcaaagt
     2281 gcatagcgtc gcaatgggaa ccgccgttgc cgcaggaaag cactttgcca ccggctttaa
     2341 agctgtctgc taacaggacc gccgcgcgct gaatggcgtg aatattggcg tcatctttta
     2401 aaaagttagc cagcgtttcc gccgcttcgt tcagttcgtt acgaataaga tcctggtaca
     2461 tgaggatatc cttcagcata aatgtaatag acaaaatgca gtgtaccgga taccgccaaa
     2521 agcgagaagt acgggcaggt gctatgacta ggactttttg acctgaagtg cggataaaaa
     2581 cagcaacaat gtgagctttg ttgtaattat attgtaaaca cattgctaaa tgtatttaca
     2641 tccactacaa ccatatcatc acaagtggtc agacctccta caagtaaggg gcttttcgtt
     2701 atgatgattt tgagtattct cgctacggtt gtcctgctcg gcgcgttgtt ctatcaccgc
     2761 gtgagcttat ttatcagcag tctgattttg ctcgcctgga cagccgccct cggcgttgct
     2821 ggtctgtggt cggcgtgggt actggtgcct ctggccatta tcctcgtgcc atttaacttt
     2881 gcgcctatgc gtaagtcgat gatttccgcg ccggtatttc gaggtttccg taaggtgatg
     2941 ccgccgatgt cgcgcactga gaaagaagcg attgatgcgg gcaccacctg gtgggagggc
     3001 gacttgttcc agggcaagcc ggactggaaa aagctgcata actatccgca gccgcgcctg
     3061 accgccgaag agcaagcgtt tctcgacggc ccggtagaag aagcctgccg gatggcgaat
     3121 gatttccaga ttactcatga gctggcggat ctgccgccgg agttgtgggc gtaccttaaa
     3181 gagcatcgct tcttcgcgat gattatcaaa aaagagtacg gcggactgga gttctcagct
     3241 tatgcccagt ctcgcgtgct gcaaaaactc tccggcgtga gcgggatcct ggcgattacc
     3301 gtcggcgtgc cgaactcatt aggcccgggc gagctgctgc aacattacgg cactgacgag
     3361 cagaaagatc actatctgcc gcgtctggcg cgtggtcagg agatcccttg ctttgcactg
     3421 acaagcccgg aagcgggttc cgatgcgggc gcgattccgg acaccgggat tgtctgcatg
     3481 ggcgaatggc agggccagca ggtgctgggg atgcgtctga cctggaacaa acgctatatt
     3541 acgctggcac cgattgcgac tgtgcttggg ctggcgttta aactctccga cccggaaaag
     3601 ctgctgggtg gcgcagaaga tttaggtatt acctgtgcgc tgatcccgac caccacgccg
     3661 ggcgtggaaa ttggtcgtcg ccacttcccg ctgaacgtac cgttccagaa cggaccgacg
     3721 cgcggtaaag atgtcttcgt accgatcgat tacatcatcg gtgggccgaa aatggccggg
     3781 caaggctggc ggatgctggt ggagtgcctc tcggtaggcc gcggcatcac cctgccttcc
     3841 aactcaaccg gcggcgtgaa atcggtagcg ctggcaacgg gcgcgtatgc tcacattcgc
     3901 cgtcagttca aaatctctat cggtaagatg gaagggattg aagagccgct ggcgcgtatt
     3961 gccggtaatg cctacgtgat ggatgctgcg gcatcgctga ttacctacgg cattatgctc
     4021 ggcgaaaaac ctgccgtgct gtcggctatc gttaagtatc actgtaccca ccgcgggcag
     4081 cagtcgatta ttgatgcgat ggatatcact ggtggcaaag gcattatgct cgggcaaagc
     4141 aacttcctgg cgcgtgctta ccagggcgca ccgattgcca tcaccgttga aggggctaac
     4201 attctgaccc gcagcatgat gatcttcgga caaggagcga ttcgttgcca tccgtacgtg
     4261 ctggaagaga tggaagcggc gaagaacaat gacgtcaacg cgttcgataa actgttgttc
     4321 aaacatatcg gtcacgtcgg tagcaacaaa gttcgcagct tctggctggg cctgacgcgc
     4381 ggtttaacca gcagcacgcc aaccggcgat gccactaaac gctactatca gcacctgaac
     4441 cgcctgagcg ccaacctcgc cctgctttct gatgtctcga tggcagtgct gggcggcagc
     4501 ctgaaacgtc gcgagcgcat ctcggcccgt ctgggggata ttttaagcca gctctacctc
     4561 gcctctgccg tgctgaagcg ttatgacgac gaaggccgta atgaagccga cctgccgctg
     4621 gtgcactggg gcgtacaaga tgcgctgtat caggctgaac aggcgatgga tgatttactg
     4681 caaaacttcc cgaaccgcgt ggttgccggg ctgctgaatg tggtgatctt cccgaccgga
     4741 cgtcattatc tggcaccttc tgacaagctg gatcataaag tggcgaagat tttacaagtg
     4801 ccgaacgcca cccgttcccg cattggtcgc ggtcagtacc tgatgccgag cgagcataat
     4861 ccggttggct tgctggaaga ggcgctggtg gatgtgattg ccgccgaccc aattcatcag
     4921 cggatctgta aagagctggg taaaaacctg ccgtttaccc gtctggatga actggcgcac
     4981 aacgcgctgg cgaaggggct gattgataaa gatgaagccg ctattctggt gaaagctgaa
     5041 gaaagccgtc tgcgcagtat taacgttgat gactttgatc cggaagagct ggcgacgaag
     5101 ccggtaaagt tgccggagaa agtgcggaaa gttgaagccg cgtaattgaa taacggagcc
     5161 gaaaggctcc gtttctttat ccgctaatta tttaaaatta aagccatccg gatggttttc
     5221 caggctgccg gtcaacgccg cgaacagcac cgttttacca tcaatcgaaa gcgcatcgtt
     5281 cacattcagc caggtgagtt tctcttgcga cgttttctca tcaatagtcg agaacagccc
     5341 cgtcatctga ttagatttct cggaccacat cacagcgata cgttgcgagc cacagtcatg
     5401 cggtttgcac gcgctcatca cctgatacgt ctcatctccc aacgttacgg tttgtgcggg
     5461 agtataagta ccgcctttca tcacccaggc aggcagctta tgcccttgta ccatctgatt
     5521 aaatgcagct ttggtggttt cgccctttgc aaggctgcta atggttaaat catcctgcgc
     5581 cattgcactg gtggcgatga ccagagcggc gactgtcgtt attgccttaa acatcattcc
     5641 tcccgagctt atcctgccca tgttattaac cttctaaagc ctagcgataa cacgataatt
     5701 tgcaaatcag atatttccaa tatcagcatt tgttatcaat ttattctgcg ctaaggcaac
     5761 tgcctgataa ggtgttaaag ttataaaacc cttcgcataa aggagttgta caccgtgcct
     5821 ggtttgaaga ttacgctttt gcagcaacca ctggtgtgga tggatggccc tgccaacctg
     5881 cgtcattttg atcgtcaact ggaaggtatt accgggcgcg atgtgatcgt tctaccggag
     5941 atgtttacca gcggctttgc catggaagcg gcagcttcgt cgctagcaca agatgacgta
     6001 gtgaactgga tgacagctaa ggcgcagcag tgcaatgcgc tgattgcagg cagtgttgca
     6061 ttacaaacgg agtctggttc ggttaaccgc tttttgctgg ttgagccggg cggcacggta
     6121 catttttatg ataagcgtca tctgttccgc atggcagatg agcatctaca ttataaagcg
     6181 ggcaatgcgc gagtgattgt ggaatggcgc ggctggcgta ttttgccgtt ggtgtgctac
     6241 gacttacgtt ttccggtgtg gtcgcgcaat ctcaacgatt atgacctcgc catctacgtt
     6301 gccaactggc ctgctccgcg ctctctgcac tggcaggcat tgctgacggc ccgcgcgatt
     6361 gagaatcagg cgtatgtggc gggatgcaat cgcgtcggca gcgatggcaa cggctgccat
     6421 tatcgcggtg acagccgggt gattaatcca caaggcgaga ttatcgctac tgccgacgcg
     6481 catcaggcaa cgcgcattga tgcggagctg tcgatgatgg cattgcggga atatagagaa
     6541 aagtttccgg catggcagga tgcggatgag tttaggttgc ggtgagtggg ggttgtgttt
     6601 aaggctgggg gagagtcggg gtaagactac gaaagcccgc tctccgcaag gactgacgcc
     6661 agatagtttc tgtccatagc tgct
//
LOCUS       DADMHC010000203         6639 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.206, whole genome shotgun sequence.
ACCESSION   DADMHC010000203 DADMHC010000000
VERSION     DADMHC010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6639)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6639)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6639
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.206"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            48..788
                     /locus_tag="JNZ57_003487"
     CDS             48..788
                     /locus_tag="JNZ57_003487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709808.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HAY8829576.1"
                     /translation="MGSVLDEFQTHRPLIACTVIGLILGDLKTGIILGGTLELIALGW
                     MNVGAAQSPDSALASIISAILVIVGQQSIATGIAIALPVAAAGQVLTVFARTITVVFQ
                     HAADKAAEEARFRTLDILHVSAFGVQALRVAIPALIVSLFVSADMVSNMLSAIPEFVT
                     RGLQIAGGFIVVVGYAMVLRMMGVKYLMPFFFLGFLAGGYLDLSLLAFGGVGVIMALV
                     YIQLNPQWRKAEPQLQATASTALDQLDD"
     gene            799..1620
                     /locus_tag="JNZ57_003488"
                     /pseudo
     CDS             799..1620
                     /locus_tag="JNZ57_003488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709807.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
     gene            1675..2905
                     /locus_tag="JNZ57_003489"
                     /pseudo
     CDS             1675..2905
                     /locus_tag="JNZ57_003489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312968.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
     gene            3288..3977
                     /gene="pepE"
                     /locus_tag="JNZ57_003490"
     CDS             3288..3977
                     /gene="pepE"
                     /locus_tag="JNZ57_003490"
                     /EC_number="3.4.13.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase PepE"
                     /protein_id="HAY8829577.1"
                     /translation="MELLLLSNSTLPGKAWLEHALPLIAEQLQGRRSAVFIPFAGVTQ
                     TWDDYTAKTAAVLAPLGVSVTGIHSVVDPVAAIENAEIVIVGGGNTFQLLKQCRERGL
                     LAPITDVVKRGALYIGWSAGANLACPTIRTTNDMPIVDPQGFDALNLFPLQINPHFTN
                     ALPEGHKGETREQRIRELLVVAPELTIIGLPEGNWITVSKGHATLGGPNTTYVFKAGE
                     EAVPLEAGHRF"
     gene            complement(4068..5699)
                     /locus_tag="JNZ57_003491"
     CDS             complement(4068..5699)
                     /locus_tag="JNZ57_003491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HAY8829578.1"
                     /translation="MLTLLHLLSAVALLVWGTHIVRTGVMRVFGARLRTVLSRSVEKK
                     PLAFCAGIGVTALVQSSNATTMLVTSFVAQDLVALAPALVIVLGADVGTALMARILTF
                     DLSWLSPLLIFIGVIFFLGRKQSRAGQLGRVGIGLGLILLALELIVQAVTPITQANGV
                     QVIFASLTGDILLDALIGAMFAIISYSSLAAVLLTATLTAAGIISFPVALCLVIGANL
                     GSGLLAMLNNSAANAAARRVALGSLLFKLVGSLIILPFVHLLAETMGKLSLPKAELVI
                     YFHVFYNLVRCLVMLPFVDPMARFCKTIIRDEPELDTQLRPKHLDVSALDTPTLALAN
                     AARETLRIGDAMEQMMEGLNKVMHGEPRQEKELRKLADDINVLYTAIKLYLARMPKEE
                     LAEEESRRWAEIIEMSLNLEQASDIVERMGSEIADKSLAARRAFSLDGLKELDALYEQ
                     LLSNLKLAMSVFFSGDVTSARRLRRSKHRFRILNRSYSHAHVDRLHQQNVQSIETSSL
                     HLGLLGDMQRLNSLFCSVAYSVLEQSDEDEGWDEY"
     gene            complement(5919..>6639)
                     /locus_tag="JNZ57_003492"
     CDS             complement(5919..>6639)
                     /locus_tag="JNZ57_003492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000096005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829579.1"
                     /translation="AEKTLNPRGVVGLFPANRVGDDIEIYRDETRTHVINVSHHLRQQ
                     TEKTGFANYCLADFVAPKLSGKADYIGAFAVTGGLEEDALADAFEAQHDDYNKIMVKA
                     LADRLAEAFAEYLHERVRKVYWGYAPNENLSNEELIRENYQGIRPAPGYPACPEHTEK
                     ATIWELLEVEKHTGMKLTESFAMWPGASVSGWYFSHPDSKYYAVAQIQRDQVEDYARR
                     KGMSVSDVERWLAPNLGYDAD"
BASE COUNT         1494 a         1796 c         1784 g         1565 t
ORIGIN      
        1 gtaccctaca aatcattgct atatttcttt tttcctgtat tgccggaatg ggcagcgtgc
       61 tggatgaatt tcagactcat cgcccgttaa ttgcctgtac ggtgattggt ttaattctcg
      121 gtgatttaaa aaccggaata atactcggtg gtacgctgga attgatagct ctcggctgga
      181 tgaacgtcgg cgcggcgcaa tctccggatt ctgcactcgc cagcataatc tccgccattc
      241 tggttatcgt tggtcagcaa agcatcgcca ccggaatcgc catcgcgttg cctgtggctg
      301 cggcaggcca ggtgctgact gtgtttgccc gtaccatcac cgtagtgttc cagcacgcgg
      361 cggataaagc agcggaagaa gcacggtttc gcactctcga tattctgcat gtctccgcgt
      421 ttggcgtgca ggcgctgcgc gttgctattc cggcactgat tgtctcactg ttcgtcagcg
      481 ccgatatggt gagcaatatg ctgagcgcga taccggaatt cgtgacgcgc ggtctgcaaa
      541 ttgctggcgg ttttatcgtg gtggtcggtt acgccatggt gctacgtatg atgggcgtga
      601 aatatttgat gcctttcttt ttcctcggtt tcctcgcagg tggctacctc gatctcagtc
      661 tgctggcgtt cggtggcgtc ggcgtgatca tggccctggt ctacatccag ctaaatccac
      721 agtggcgtaa agctgaacct caactccagg ccaccgcctc caccgccctt gaccaacttg
      781 acgattaacg gagccatcat ggaacagaga aaaattacac gcagcgatct ggtgagcatg
      841 tttctgcgct ccaacctgca acaggcgtcc tttaactttg aacgtattca cgggctgggt
      901 ttttgctacg acatgatccc cgccatcaaa cgactttacc cattaaaaga ggatcaggtt
      961 gcggcgctca ggcgacacct ggtgttcttc aataccacgc cagccgtatg tggcccggtc
     1021 atcggcgtca ctgccgccat ggaagaggcg cgggccaacg gcgcggaaat tgatgacggt
     1081 accattaacg gcatcaaagt cggtctgatg ggactattgg caggagttgg cgatccactg
     1141 gtctggggaa cgctgcgccc gattaccacc gcgctcggcg catctctggc actttcgggc
     1201 aacattctcg gcccgctgct gttcttcttt attttcaatg cggtgcgtct ggcgatgaag
     1261 tggtatggcc tacagctcgg ctttcgcaaa ggggtgaata tcgtcagcga tatgggcggg
     1321 aatgtgctgc aaaaactcac cgaaggcgcg tcgattctcg ggctgtttgt gatgggcgtg
     1381 ctggtcacca aatggacgtc aatcaacgta ccgttgatgg tttcacaaac gcatgccgcc
     1441 gatggctcca ccgtcaccat gaccgtgcag aacattctcg accaactttg ccctggtttg
     1501 ctggcgctcg gtctgacgct gcttatggtt cgtctgctca acaaaaaaat taacccggta
     1561 tggctgattt tcgccctgtt tggcttaggg attatcggta atgcgctggg cttcctgtcc
     1621 agattcttcg ccccggcacg actgccgggg ccatcgctca acatgaggtg gtttatgaaa
     1681 acaacagctc tgcgtcttta tggtaaacgt gatttacgcc tggaaacctt tgaccttcct
     1741 gaaatgcagg aggatgaaat cctcgcgacg gtggtcactg acagcctgtg cctctcttcc
     1801 tggaaagagg ccaatctggg tgaaaaccat aaaaaagtac ccgacgatgt ggcgcccccc
     1861 ccccatcatc atcggccacg agttttgcgg cgatattctg gccgtgggta aaaagtggca
     1921 gcacaaattc cagccgggtc agcgttatgt gattcaggcc aacctgcaac tccccgaccg
     1981 cccggactgc cccggctact ccttcccgtg ggtgggcggc gaagccacgc atgtggttat
     2041 tcccaacgag gtcatggaac aagattgcct gctggcatac gacggcgaaa cctattttga
     2101 aggctcactg gttgaaccgc tttcctgcgt gattggcgcg ttcaacgcca actatcatct
     2161 tcaggaaggt agttataacc acacgatggg gattcgcccg caagggcgca tgctgatcct
     2221 cggcggcacc ggaccaatgg gactgttggc gattgattat gcgctacatg gacccgttaa
     2281 cccgtcgcag ctcgtcatta ccgataccga caacgataaa ttgagttatg cgcgcaagca
     2341 ctatccatca gaaccgcaaa cactgattca ttatctcaat gccgccgatg cagcatttga
     2401 tacgctaatg gcgctgagtg gcggtcacgg cttcgatgat attttcgtct ttgtgcctaa
     2461 tgaaggactg gtgactctcg cctcttcctt gctggcgaca gatggttgcc tgaatttctt
     2521 cgccggaccg caggataaac atttcagcgc gccaattaat ttctacgatg tgcattatgc
     2581 atttacccac tacgtgggca cgtcaggcgg caataccgac gacatgcgcg cggcggtcaa
     2641 actgattgaa gagaaaaaag tgcaggccgc aaaagtggta acacatattc ttgggctgaa
     2701 tgccgcgggc gaaaccacgc ttgaattgcc tgccgtcggc ggcggcaaaa agctggtgta
     2761 taccgggaaa tacctgccgc tgacgtcact cacgcagatt caggatcaag cactggcggc
     2821 gattctggcg cgtcatcagg ggatctggtc cggtgaggcg gagcaatatc tgctcactca
     2881 tgcagaggca atttcccatg attaatcgcg ctacttaact ctgcatgtcg ctggctggtc
     2941 gccgcggcaa cttcgcgacc tgatgtgcgg ctgattgctg aagcggccca atgtgcacga
     3001 gaaggataaa aaaacatcag cgccttaagg ggcgctcaaa ttggtggcaa agtacacatt
     3061 gtttatgccg gatgcggaat aaagctttat tcggcctaca taatctcgaa aattcaatat
     3121 attgcagtta tctggtaggt ctggtaagcg tagcgcatca ggcaatgctg tgtttgtcat
     3181 cagtctcagc tcccggtgca atacgggaca tcgtgagcca tgtcagtaag tggttaaatt
     3241 cgcagtggta gcatgccttc cgtgatttct tactaaccgg agaagtaatg gaactgcttt
     3301 tattgagtaa ctcgacgctg ccgggtaaag cctggctgga acatgcactg ccgctaattg
     3361 ctgaacagtt gcagggtcgc cgctcagcgg tgtttatccc tttcgctggc gtaacgcaga
     3421 cctgggatga ttacacagcg aaaacggctg cggttctcgc tccgctgggt gtttctgtca
     3481 ccggtattca tagcgttgtc gatcccgttg ccgcgattga aaatgctgag atcgtgattg
     3541 tcggcggcgg gaatactttc cagttgctga aacagtgccg cgagcgcggg ctgctggcac
     3601 caattactga cgtggttaaa cgtggtgcgc tgtatattgg ctggagcgca ggcgctaacc
     3661 ttgcttgccc aaccattcgt accaccaacg atatgccgat tgtcgatccg caaggtttcg
     3721 atgcgctaaa tctgttcccg ttgcaaatca acccgcactt caccaacgcg ctgccggaag
     3781 gccataaagg tgaaacccgt gagcagcgta ttcgcgaact gctggtcgtc gcgccagaac
     3841 tgacgattat tggtctaccg gaaggtaact ggatcacagt gagtaaaggt cacgctacgc
     3901 tgggtggccc gaacaccacc tatgtgttta aggccggtga agaagcggtt ccgctggaag
     3961 ctggtcaccg tttttaagtg aattgccgga tgcatgatcc ggcatcttgt tcatagtgcc
     4021 tgatgcgacg cttgacgcgt cttatcaggc ctacaggatt cacaatatta atactcgtcc
     4081 catccttcat cttcatccga ctgttccagc acactgtaag ccaccgaaca aaacagcgag
     4141 ttcaggcgct gcatatctcc cagtaagcct aaatgtagcg aactggtttc aatgctctgc
     4201 acgttttgct gatgcaggcg atcgacgtgg gcgtgggaat agctgcgatt aagaatgcga
     4261 aagcgatgct tactacggcg caaacgacga gcgctggtga catcgccaga gaagaacacc
     4321 gacattgcca gctttaaatt actgagcaat tgctcataga gcgcatccag ttccttcaac
     4381 ccatcaagcg aaaatgcccg ccgtgctgcc agtgatttgt cagcaatttc gctgcccatg
     4441 cgctcgacga tatcggaggc ctgttcaagg ttgagcgaca tttcaataat ctccgcccag
     4501 cggcgcgact cttcctccgc cagctcttct tttggcatcc gcgccagata cagcttaatg
     4561 gcggtgtaga gaacgttgat atcatctgcc agcttacgca gctctttctc ctgccgtggc
     4621 tcaccgtgca tcactttatt caacccttcc atcatctgtt ccatggcgtc gccaatgcgc
     4681 agggtttcgc gcgcggcgtt cgccagagca agcgtgggcg tatccagcgc gctgacatcc
     4741 agatgtttag gccgtagctg ggtatccagt tccggttcat cgcgaataat cgttttgcaa
     4801 aaccgtgcca tcgggtcaac aaatggcagc atgaccaggc aacgtacaag gttgtagaag
     4861 acgtggaaat agatcaccag ttccgctttt ggcaatgaca gcttccccat tgtctctgcc
     4921 agcaaatgga caaacggcag gataatcagg ctacccacca gcttaaacag cagactaccc
     4981 agcgcgacac ggcgggctgc ggcattggcg gcactgttgt tgagcatcgc cagcaggccg
     5041 gaaccgaggt tagcaccaat caccagacag agcgccacgg ggaaggagat aatgcctgcg
     5101 gcggtcagag tcgcggtcag cagtacagca gcaaggctgg agtagctgat aatggcgaac
     5161 atcgcgccaa tcagcgcatc cagcagaata tcgccggtca gcgaggcaaa gatcacctga
     5221 acgccgtttg cctgggtgat cggcgttacg gcctgcacaa tcaactccag cgccagcaaa
     5281 atcagcccaa gaccaatacc gacgcggccc agttgcccgg cgcgtgactg tttgcgtccg
     5341 aggaaaaaaa tcacgccgat aaaaataagt aacggtgaca gccaggataa gtcgaaggtg
     5401 agaatacgcg ccattagcgc cgtcccgaca tctgccccca gcacaatgac cagagccggt
     5461 gcgagggcta ccagatcctg agcgacgaac gaggtcacca gcatggtggt ggcattactg
     5521 ctctgtacca gtgcggtaac gccgatcccc gcgcaaaagg cgagcggctt tttttcgacg
     5581 ctccggctaa ggacagtacg caaacgcgcg ccgaagacgc gcattacgcc ggttcgaaca
     5641 atatgagtcc cccagaccag cagggcgacg gcagaaagca ggtgaagcag cgttaacacg
     5701 agttcaggtt ctccttatcg ttatatgttc ctgaagcaat tgaatgacca aaggaccgga
     5761 aacacgctga ctggcatctt tactgtgcct tttgacattc gtttttccgg ctaagattat
     5821 tccagcctga ttccagtata agtgtttcat attaataaag agacagggca ctcattgagc
     5881 gccctgtttg ttgtaaggaa aagtgacaga tttgtgaatc agtccgcgtc ataccccaga
     5941 ttcggtgcca gccagcgctc aacatctgag acgctcatac ctttacggcg ggcatagtct
     6001 tcaacctgat cgcgctgaat ttgcgccacg gcgtagtact tgctgtccgg gtggctgaaa
     6061 taccaacccg aaaccgatgc accgggccac atggcgaaag attctgtgag tttcatgccg
     6121 gtatgttttt ccacttccag cagctcccag atggtggctt tttccgtatg ttccgggcag
     6181 gccgggtagc ccggtgccgg acggatgccc tggtagtttt cgcggatcag ttcttcgttg
     6241 ctgaggttct cgttcggcgc atagccccag tagactttac gcacacgctc atggagatac
     6301 tccgcaaagg cttcggctaa acggtcggca agcgctttca ccatgatttt gttgtaatca
     6361 tcgtgctgcg cttcaaaggc atcagccagt gcgtcctctt ccagcccgcc agtcacggca
     6421 aatgcgccga tgtaatctgc tttaccagaa agcttcggcg caacgaagtc agcgagacag
     6481 tagttagcga atcccgtttt ttcggtctgt tgacgcagat ggtggctgac attgatcaca
     6541 tgggtgcgcg tttcgtcacg gtagatttca atgtcatcgc ccacacggtt tgccgggaac
     6601 aggcccacca cgccacgcgg attcagcgtt ttctcggcg
//
LOCUS       DADMHC010000204         6636 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.207, whole genome shotgun sequence.
ACCESSION   DADMHC010000204 DADMHC010000000
VERSION     DADMHC010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6636)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6636)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6636
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.207"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(625..2334)
                     /locus_tag="JNZ57_003493"
     CDS             complement(625..2334)
                     /locus_tag="JNZ57_003493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858142.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShET2/EspL2 family type III secretion system
                     effector toxin"
                     /protein_id="HAY8829580.1"
                     /translation="MPLNKTFSSSIFSTKNSLSTDMSVNRDNRTITSSIMRVSNSSEL
                     IQFKNKTAPYFSEKRNVKVNINGVAKDIYGRQIVCRHLASYWEMNFMETNGKVNYQLL
                     STPDAIAKNVCLEKTEDFSKSPAYIYFVENKKWGTVITNFFYNMKKNGDFVRTLSACT
                     LNHQMALGLKIKRVQESEKWVVQFFDPNRTVTHKRTVFTCDSHFELSQLSAKDFFDDF
                     YWKIYGLEQPGQVIFEDRHNSPLTNTVKLLPDELINSRVIYHAITKNLTEVLFILMEK
                     YKNGEISQSKLVNLLATRSSDGTPAFYIALQNGCSDIIQVYGKILNMCNLSQETILTL
                     LAAVGANNVPGLCMSFMNGHVDTIKAYGEIVFKTPLTSDKRLYLLAAKDSHDLPGLFF
                     ALQNGHADSIRMFGSLLNKKMLSSEQIKELLKVKHGLFMALQNGHTKAIMAYGDILKI
                     LPPHQEYIDELLWIKNPNGTSGLFMAFYNGHTETIRAFCNILKNYSFTTRRLVEMLSA
                     TNKDGIPGVFASVVNRDKETILEYCRIIKENNLEPDTIAEQFSKKMKKTFIEIINRFN
                     HFL"
     gene            complement(2766..3485)
                     /locus_tag="JNZ57_003494"
     CDS             complement(2766..3485)
                     /locus_tag="JNZ57_003494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector
                     phosphothreonine lyase"
                     /protein_id="HAY8829581.1"
                     /translation="MPIKKPCLKLNLDSLNVVRSEIPQMLSANERLKNNFNILYNQIR
                     QYPAYYFKVASNVPTYSDICQFFSVMYQGFQIVNHSGDVFIHACRENPQSKGDFVGDK
                     FHISIAREQVPLAFQILSGLLFSEDSPIDKWKITDMNRVSQQSRVGIGAQFTLYVKSD
                     QECSQYSALLLHKIRQFIMCLESNLLRSKIAPGEYPASDVRPEDWKYVSYRNELRSDR
                     DGSERQEQMLREEPFYRLMIE"
     gene            complement(3610..4173)
                     /locus_tag="JNZ57_003495"
                     /pseudo
     CDS             complement(3610..4173)
                     /locus_tag="JNZ57_003495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343760.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            4157..4415
                     /locus_tag="JNZ57_003496"
                     /pseudo
     CDS             4157..4415
                     /locus_tag="JNZ57_003496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611146.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(4524..5102)
                     /locus_tag="JNZ57_003497"
     CDS             complement(4524..5102)
                     /locus_tag="JNZ57_003497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829582.1"
                     /translation="MKVSFKSLGYIFHDIYNKKHTIDEFNDVVRKAVLSGKINELNAC
                     HKVAIFLAEKDNEITKKDKAKIIDTLTENYSIEFQQLMNISERTLNSSLYITPGESGF
                     VSFVNREGKICHTAYVKSSDNSMAYYHANYSSIDKYITDMCGLICMRHIESTCIIFYM
                     LDEKVLSAIAEFMNEKGWRAAFCSAKNLYKCV"
     gene            complement(5596..5760)
                     /locus_tag="JNZ57_003498"
                     /pseudo
     CDS             complement(5596..5760)
                     /locus_tag="JNZ57_003498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001436458.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            complement(5947..6376)
                     /locus_tag="JNZ57_003499"
                     /pseudo
     CDS             complement(5947..6376)
                     /locus_tag="JNZ57_003499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013747467.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
     gene            complement(6424..>6636)
                     /locus_tag="JNZ57_003500"
     CDS             complement(6424..>6636)
                     /locus_tag="JNZ57_003500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829583.1"
                     /translation="CADLNIPFFVDAGNKKLVFWFVRVDDEGYPEIARCTEREFATIP
                     AGINADGMYCPECGTVHWPDGVIPPF"
BASE COUNT         1822 a         1523 c         1213 g         2078 t
ORIGIN      
        1 ataagcttga tacaactggt ctggtatata cagtttcttt gagtgcggtt acgtccacag
       61 aggtaacggt aaaagtaacc ccttgtcggg accactccga ccgcgcacag aggcattttc
      121 atcgctgaca ggccgcattg cctcgcaggg ctggaggagg atcggtgata tccggacgac
      181 cgtaccggct tacgccgggc ttcggcggtt ttactcctct gccatgtgca acaacggagt
      241 gccgccttac atgccgctgg cgcggcatat cctggtaaca tttttgttga taccaccttc
      301 cggccttatc ctgaccagtg ggctttcctg gcatcgatga taccgatgaa cgcgcatgat
      361 attgagccga cgatattacg ggcaactgga aatactcacc ctctggatgt gacctttatc
      421 catgaagaag atttggccat accatggaaa cctgaacaat catcagttta cgcccatgta
      481 aacccctacg ggatatttga actcgatatg gaaacaaggt tgccaatcga ggtggttgcc
      541 tgaaagttgg cagttacccg gtcactacac cttgttggag tgaacatatc aaaaacaggt
      601 aattacacaa tttaaattac agtctcataa aaaatgatta aatctattta ttatttcaat
      661 aaacgttttt ttcatcttct ttgaaaattg ttctgctata gtatccggtt ccagattgtt
      721 ctcttttatt attctacaat actctaatat tgtttctttg tctctattta ctacagatgc
      781 aaatacacca ggaataccat ctttattagt tgcggacagc atttcgacca atcgtcttgt
      841 ggtaaaacta tagtttttta gaatattaca aaaggcacgt attgtttcgg tatggccatt
      901 ataaaatgcc ataaaaagtc ctgatgtacc gttgggattt tttatccata ataattcatc
      961 tatatattcc tggtgagggg ggagtatttt tagtatatct ccatacgcca taatggcctt
     1021 tgtgtgccca ttttgaagtg ccataaacaa cccatgcttt actttcaata attctttaat
     1081 ttgttcacta ctaagcattt tcttattaag cagacttccg aacatacgaa tactatctgc
     1141 atgtccattc tgcaatgcaa aaaataaccc aggtaaatca tggctgtctt tcgcagctaa
     1201 tagatataat ctcttatcgg aagttaacgg ggttttaaag actatttccc cataggcttt
     1261 tattgtgtct acatgtccgt tcataaaaga catgcataaa cccggcacat tgtttgcccc
     1321 taccgcagca agcaatgtaa gtattgtttc ttgactaaga ttgcacatat ttaatatctt
     1381 accatatact tgaataatgt ctgaacatcc gttttgaagt gctatataaa atgcaggagt
     1441 accatcagag cttctcgtgg ccagaaggtt caccagttta gattgagaaa tttcaccatt
     1501 tttgtatttt tccatcagta taaataatac ttctgtcaga ttctttgtta tcgcatgata
     1561 tataactctg gaattgatca attcatctgg taaaagtttc actgtgtttg ttagagggga
     1621 attatgccta tcttcaaata ttacctgccc gggttgctcc agaccataaa ttttccaata
     1681 aaaatcatca aaaaaatcct tagcggataa ttgactcagt tcgaaatggc tatcacaagt
     1741 aaatacagta cgtttatgag taacagttcg attaggatcg aaaaactgaa caacccattt
     1801 ttcactttct tgtacgcgct ttattttcaa ccctaacgcc atttggtggt ttaatgtgca
     1861 tgctgataat gttctgacaa agtctccatt ttttttcatg ttataaaaaa aattagtaat
     1921 aactgttccc cactttttat tttccacaaa ataaatataa gctggtgatt ttgaaaaatc
     1981 ttccgttttt tccaaacata cattttttgc aatagcatca ggggtgctaa gaagctgata
     2041 gtttaccttc ccatttgttt ccataaaatt catttcccaa taggaagcta ggtgacggca
     2101 aactatttgt cttccatata tatcttttgc cactccattt atatttacct tcacatttct
     2161 cttttctgaa aaataaggtg ctgttttatt cttaaactga attagttcac tggagtttga
     2221 gaccctcata atagaacttg ttattgttct attatctctg ttaacagaca tatctgttga
     2281 taacgaattt tttgttgaaa atatactaga tgaaaatgtt ttatttaacg gcatagaaga
     2341 caaccataga gatgttataa tactattaga ttgcagttac taatagtaaa agcctcctta
     2401 caaggaggta gcttattcag aatgctccta taagatagcg agctcgtcaa cgatacagat
     2461 gatctgatta tatagtgcaa aaggagaaca ggaaaatagg cactggaaaa gatgaaggcc
     2521 tgatgggagc attaactaat gcaaaatccg acaggttaat atcccgaaaa gcaatcaaac
     2581 gactcaaaca ggagatgcac gctgaagtgg tggacaactg ttcggatttc agatgagtag
     2641 ctcagcagtt tatgagccga atgctctgtc acggtcagga atcaggctgc atacgctgtg
     2701 ccaaatctaa tcgtagttat tctaaccagt tttcaagcta caaggtggtg tagctggcat
     2761 cttctctact ctatcatcaa acgataaaat ggttcctctc gtaacatttg ctcttgcctt
     2821 tcacttccat ctcgatcgct tcgtagttca ttacgatagc tgacatattt ccagtcttca
     2881 ggtctaacat ctgacgccgg atactccccg ggagcgattt tgcttcttaa tagattagac
     2941 tcgagacaca ttataaattg tcgtatttta tgaagtaata aagcactata ttgcgagcat
     3001 tcctgatctg attttacata tagcgtaaac tgagctccta tccccacacg agattgctga
     3061 gaaactcgat tcatatcagt tatcttccat ttatctatag gactgtcctc tgaaaataat
     3121 aaaccagaca aaatttggaa tgccagagga acttgctccc tagctatact aatatgaaac
     3181 ttgtccccaa caaaatcccc cttactctga ggattttcac gacatgcatg aataaacaca
     3241 tctccactat ggttcacaat ctggaatcct tggtacatga cagaaaaaaa ttgacatata
     3301 tcagagtaag ttggcacgtt cgatgctact ttgaaatagt acgctgggta ttgccgtatt
     3361 tggttgtaca atatattgaa gttatttttc aatctttcat tcgcagaaag catctgcggt
     3421 atttcagacc tcacaacatt caaagaatct aaatttagtt ttagacaggg cttttttatg
     3481 ggcatagaaa acgtcctcta taaaatagat atattatctt atattgattg tttatcatct
     3541 tttataaaac gatacattat atgtaatgta tgtaagcgta agggtcttct ccgatcatgg
     3601 tgggaaggct tagaacgcca tattcagttt cccatagtgg aacatcactc ccagcttaaa
     3661 gcgctcccgg ttgcggtagc ccttggcttt tattctcagc agcctgatct tgctgttcag
     3721 tgcttccgca tttccgtttg atacgccatg gcgcatggcg ttcaggatac cgtacaacct
     3781 tttccctatc gttttagcca cattcttcat catggggacg tcactgttgg ccgccagcga
     3841 cagccatctc tgccagtcgt tgcgtctttc ctcgctccat ggtctgctcc agatatcctt
     3901 tgccagttct ttcagcgccc agcacaggct cgtcagcttc atctgcgcac gcagccatat
     3961 cagcttttcc tgcctggatt cggtcatcca tttatcgctg tgctgccaca ggaagcgagt
     4021 tccctttgcc tgacgacgac tttcaacagg aagatgcgga tgttcattct ggcgggtttt
     4081 atccaccacc tcacccggtt gtttcgccac atgaaagcga tcgaaggcta ttttctcaac
     4141 cgcattgggt aagtggatgc gcgctgctct tagtttgctg agccagttta gcattgcctt
     4201 ctacatgacc gatgcctgag ccggtatacc gaactttatt gtcctcaacc agtcatgtta
     4261 taagcaagaa atgcactcag cggatagagc gacataatct gaacctgcgg acacatctta
     4321 agcggcttac ccgcaaaacc atatgcttct caaagtctga tgatatgcac tacaagatca
     4381 tcggctggta tctgacaatc aaccaccacc actaaatctg cgtcacgacc tgcaactgag
     4441 tctggttgaa caggctgagg ccctgctgaa gcaacgcgaa cctctcgact cttgttggat
     4501 tttaccaaat agtttttcta aaattaaaca catttatata agttctttgc tgaacaaaac
     4561 gcagcccgcc atcctttttc attcataaat tcagcaatgg cagataaaac tttttcatca
     4621 agcatataaa aaataatgca agtagactca atatgcctca tacaaataag gccgcacata
     4681 tccgtaatat atttgtcaat gctgctataa tttgcatggt aatatgccat gctattatct
     4741 gatgatttta catatgcagt atgacatatt tttccttcac gattaacaaa actgacaaaa
     4801 ccactttcac caggagtaat atataaagat gaatttaacg tgcgctcact aatattcatt
     4861 aattgttgaa attcaatgga atagttttca gttaatgtat ctattatctt ggctttgtct
     4921 ttctttgtta tctcattgtc tttttcggca agaaaaattg ccactttatg acatgcattc
     4981 agctcgttaa ttttacctga taaaactgct tttcttacca catcgttgaa ctcatcgata
     5041 gtgtgttttt tattatatat atcatgaaaa atatagccta aagacttaaa cgagactttc
     5101 attttatatt ctccttaaat attaacagga tatatatatc acattttcct ctatattttc
     5161 agaaaccagc tatcattttc cccattactg gtacgtcgct tcagatattt ccgcagcaag
     5221 ctataaccct gcgcactatg aggatgccat tcattataat gtttgaacac cttcgcgaga
     5281 ctactttact gctgttaaca cgtcaggttc gaacataaca ctgatttaat catatttcat
     5341 cgttttgacg aagttttctg ccattccatt ttgcaccgcc gtgtgtttgg gggcaaggcc
     5401 gaccatctgt gtttcattcg ccagatataa gtgatgagat ggcattctcc ctccttcacg
     5461 gcagaagcat tttgaccgtt taggggatgc ggacgatttt catgcctgct aagatacttt
     5521 cgttactgat gctgtccgtt tttcaccatt tcatcatcac tgattggcgt tgtgtttttg
     5581 gtcagcactc cagctttacg tttctctttt aaccggtaac tctctccttt gatattcagc
     5641 gtgtagcagc cgatctagga tcgctgttgc cagcacgtga tctccgaaca tttctcccca
     5701 gtctgcgacc cctttgtttg acgtcagtat gatgctcgct ttttcatatc gacagttcat
     5761 cgataggaat ttaaatcccc aaaagattaa aaaagcaccg aagaatgcgc gtttattcaa
     5821 cacaacctga tcatcaagta atcggtatag acacttaata ttgcttacat tgattgattc
     5881 aatgtatctc tgatggtttt ttgctccgtt cccctcaaca tggacgcaac ttcccctctg
     5941 cgactctcag ccgcaccacc gtattcgagc cagcggctca tgcatcataa cctgctctgc
     6001 cagacggtaa cccctcttca gccccgtaaa ccgcatctga cctccgcaca gctcgcactt
     6061 cagcgggtca accttcagtc actgctgata catccctctc cttgtgattt gcctcgccgt
     6121 ttttctcact gtctccgtta tggcgtacac cacatcttcc agtaatcgcc gcttcaccgg
     6181 actcaggatc ccgtatcacc atccggaacc ccttatccgc cacatgccag gagaaccttt
     6241 ccataaactc gtcgccactc atcacaaggt tttcttctcg ttttgtccgg tggctgttgt
     6301 aacgcaggcc aatttcatcc tgaccggcat aatgttccag gcggctcatc tgcaccggct
     6361 gcttctccag ccagttaagc catcggtttc cctgctgaaa aatatcggca aaacggggaa
     6421 gcatcagaaa ggcggaataa cgccatctgg ccagtgaacc gtaccgcatt cagggcaata
     6481 catgccgtcg gcgttgatac cggcaggaat tgtcgcaaat tcccgctccg tgcagcgggc
     6541 aatttccgga tacccttcgt catcaacacg tacaaaccag aagaccagtt ttttgtttcc
     6601 ggcatccaca aagaacggaa tattcaggtc tgcgca
//
LOCUS       DADMHC010000205         6603 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.208, whole genome shotgun sequence.
ACCESSION   DADMHC010000205 DADMHC010000000
VERSION     DADMHC010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6603)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6603)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6603
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.208"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(1..456)
                     /locus_tag="JNZ57_003501"
                     /pseudo
     CDS             complement(1..456)
                     /locus_tag="JNZ57_003501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310671.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
     gene            complement(456..1640)
                     /locus_tag="JNZ57_003502"
     CDS             complement(456..1640)
                     /locus_tag="JNZ57_003502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath family protein"
                     /protein_id="HAY8829584.1"
                     /translation="MSETRFHGARVTENTDLVTAINDVDSSVIGIVATADDADAKLFP
                     LNKPTLLTRVNDVLGKCGTTGTLYRALKAIADQVSTKVIVVRVAEHKEEDGKTQDQLV
                     IGGSEDDGSYTGMYALLVAEQDESIGYRPRILAAPELDTEAVTKSLCVIADKLRAFVY
                     ASCHGCNTMAEAITYRQKFNEREVMLLWPDFIAYNPKNGKNETFPAPAYACGLRAYID
                     HEQGWHKSLSNVPVKNVLGMSRHVFWSLQAEDSDANSLNNKEITTIIRRNGVRFWGNR
                     TPETNAYIFEVYTRTAQVLADSIAEAQFETIDSPLTPANVKDVISAIRAKLDSLVTAG
                     KLIGAECWYDVVDNSTTDLRQGRVRIRYKYTPVPPLEDMELYQTFTDEYFEPAFAVLG
                     GA"
     gene            1798..2907
                     /locus_tag="JNZ57_003503"
                     /pseudo
     CDS             1798..2907
                     /locus_tag="JNZ57_003503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001494339.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
     gene            3156..6275
                     /locus_tag="JNZ57_003504"
     CDS             3156..6275
                     /locus_tag="JNZ57_003504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000580159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8829585.1"
                     /translation="MIGQFLSATEILAKNYVRNKMVKNPFYSNLKWNFIEKNIIRLTS
                     SPVKSVLCISAFSFVLLYVGYLNELFIKNNLLHYFPFRHSLTEWQTTILSGQLTIIGI
                     VYPLVIGLVSILFQKKADRKIAQTAYQRYSGFMLAGLSGLFLSGFILLSVLIKTVFGS
                     YLYGIACLISILWLLINIVLSIWFFIVSLEILDDVKRQIIIKRYIAFEIVMPHICNKI
                     SAKLRLYPIYQKHNYSNLEIKQADYKGEYISVASSYSKEDELSLYHRPFQLTLNLINY
                     QLKKKNHFASFVIGDNRTKETESTGKILFSVKNIKPDSLLIKILKQCFYRAPIKGGDF
                     SVSLTMQAITADTYMYLRDSDLISFDNAISALINNFNNLCDLYFFQDDNTNNNFLLIT
                     TELFERSFQYEFSDEAYKISNNSMDKINLSERFFELCLWSGVRIINNRKHLISNELCI
                     YMGITRSQWSILTEWFRNNQSLLNASLRSRYNRILRTYTTVWEQYQESINFRFCNTEN
                     SDLFELFCKTQLQELPSMIIDATQTRDPSTIDTAVDLINRWQHSMNIDSHSVEKYSYK
                     GQLFNPGFFISKKLNFNSDREWFNIAIINALTDMRICTCLYLTSRINTSDKLMTHYIK
                     LILEGKLIDQTGGYETPTEEIDNASQLIKILIRICLWTWSENMEHNGWMNSLARRLRD
                     YDKTDMVMGRVYSNVFDCGFIDMEQSWVQLLLIFSNKNDSVSKEIKEAIENNYITYRE
                     KQRLIGVLSKICNSIEYTKIKLTLTLDDLQTKKENLRKLLQEHINMLKKDLDMRLQDA
                     AIDVHRLDSTARKTSEHLRKRIKKTLPLSLFKSIDFKQASDCFTKHKISIKIDKEPYA
                     EGIESIPYINEGDIQADLILKDIQRIILSNLFSTGCSQHTVIEDFNMLIDHIKSSADL
                     AGKLVLVMSKEIFQQYNRMLFDNPNLRELMRKNDDGSMNITTESGTRKVYFLPFVNQP
                     FSLVVKDNYFTKLIIREYDNNKLVNVTSENIKSDSDKFKLTLNYELNVVFEGNADLKI
                     AHSQRVTSE"
     gene            6411..>6603
                     /locus_tag="JNZ57_003505"
     CDS             6411..>6603
                     /locus_tag="JNZ57_003505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001512982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ogr/Delta-like zinc finger family protein"
                     /protein_id="HAY8829586.1"
                     /translation="MFRCPLCGASARIRTSRPENDSNTVRQKYYQCNNLECGVCFSTL
                     EAFHKFTSKHASPIHSSEGI"
BASE COUNT         2003 a         1466 c         1353 g         1781 t
ORIGIN      
        1 ttccggtaaa tgaagttcag caggtcaatc tcccacaacg ggcgatcgtt aacactcagc
       61 ttgtagtagg tgttttaatg gcgtaagtgt gtgatgtggc ttcgccctgt ttggcttccc
      121 ccatatcaat ttccgtcaca cgtccgcgca tttcgacttc atacaggtcg ctttctgcat
      181 cggtgtagta ttcacccgca aaacgcagca gcgtgccgtc aatcgtgccg ccatacttaa
      241 ggaacagctc acgaactgcg cccccatgac aaagctcgca tcaagcgcgg agtcgtccag
      301 accgagatca atacttaccg cacccatcat gccaccaccc cggtagctgt cggttttgcg
      361 cgtcagctta ggcagagtga cggacgtcac attacccact tcgttttcac catccacaaa
      421 cagcgtaaaa aagcgaagat gttttggcac agccatcagg cacctcccag caccgcaaat
      481 gcgggttcaa agtattcatc agtaaacgtc tggtaaagct ccatgtcttc cagtggcgga
      541 acgggcgtat atttgtagcg aatacgcaca cgtccctgac gtaaatccgt ggtgctgtta
      601 tccaccacgt cataccagca ctccgcgcca atcagtttcc cggcagtcac cagtgaatcc
      661 agttttgccc tgatggcact gataacatcc ttcacattcg caggcgtcag tggactgtcg
      721 atggtttcaa actgcgcttc cgcaattgaa tcagccagca cctgtgcggt tcgggtatac
      781 acctcaaaga tgtaggcgtt cgtttccggt gtgcggttac cccagaagcg gaccccgttg
      841 cgacgaataa tggtcgtgat ttctttgttg ttgaggctgt tggcatcgct gtcttcggcc
      901 tgcaacgacc agaacacatg cctcgacatc cccagcacat ttttaaccgg aacgttggac
      961 agcgatttgt gccatccctg ttcatggtca atgtacgcac gaaggccgca cgcataggca
     1021 ggcgcgggga acgtttcgtt tttgccattt ttcgggttgt aggcgatgaa gtccggccat
     1081 aagagcatca cctcacgttc gttgaatttc tggcggtagg taattgcctc ggccatcgtg
     1141 ttacagccat gacatgaggc atacacaaac gcgcgcagtt tatctgcaat cacgcacagg
     1201 gattttgtta ccgcctccgt gtccagctcc ggcgcggcca gaatacgcgg acggtatccg
     1261 atgctttcat cctgctctgc aacaagcagc gcatacatcc ccgtatagct gccgtcatcc
     1321 tcagaaccac cgataaccag ttgatcctgc gtctttccgt cttcttcttt gtgttcagcc
     1381 acgcgaacga cgatcacctt tgtgctcacc tggtctgcga tggccttaag cgcacgataa
     1441 agcgtccccg ttgtcccgca ttttcccagt acgtcattga cgcgggtcag cagtgtgggc
     1501 ttgttcagcg ggaacagctt cgcgtccgca tcatccgccg ttgccacgat accgataacg
     1561 ctggaatcaa catcgttaat cgctgttacc aggtcggtat tctccgtaac acgggcacca
     1621 tgaaaacgag tttcactcat agcttcagcc ccttgtatcc gttaaatgat tcagcaacaa
     1681 tcatcaccca ccacgcgcgt aatctcaccc ctgcgccgtt ctcccgccac ggcgacaaca
     1741 aaaagcagta accccctccg cacgcacatg cgaccatgcc gcacagggag ggagtagatg
     1801 accgacacca ccatgcaatt gctcagtcag ggcacggccc ccgtgaaaat gccggatttt
     1861 gatattctct cggagggtaa aacgctgtca ggcgtggcgg agcgcctgat gagcctgtaa
     1921 ctgaccgaca accggggatt tgaggcggac cagctcacca tcacgctgga tgatgcggat
     1981 ggtcagttgc agctaccgcc acggggcgcg cgtctgacgg ttctcattgg ctggaaaggg
     2041 gaaccgctga cagaaaaagg cacttacatt gttgatgaaa tcgctcacga aggaccgccg
     2101 gacaggctga ctgtttcagc cagaagcgca gattttcggg atgaatttaa cgttaaacgt
     2161 gaggtgtcct ggcatgatgt gaccgttgag cgtgtggtat ccgccatcgc tcatcgatac
     2221 ggtctgaaac cgcaaatcag cgaaatgctg atggatatcg aaatcgacca cgccgaccag
     2281 accgaagaaa gcgacatgtc ctttcttacg cgcatggcgg aaatgctggg agcaatcgcc
     2341 acggtaaaaa gcggcaatct gttattcatc atgccaggtg gtggcgtgaa cgcacagggg
     2401 cagccgttgc cctcgttcgc cattacacgc agcagcggcg atcgccatca gttccgcatt
     2461 gctgaccgcg aggcgtatac gggggtacgc gcctactggc ttgatcttaa ttacgggaaa
     2521 aagaaaaaag tcagcgtgaa acgccgcaaa ccgccaaaac ccaaaaagga gaaaagcagc
     2581 agtcgggaag gcgactatat ggaaggtgcg gaaggcaacg tgtttgtgtt acgcaagact
     2641 tatcagaacg agcaggcagc aagacgcgca gcggcggcaa agtggcagca gctacaacgc
     2701 ggagccgcat cattctccat cacgctggcg cgtggtcgtg cagaactcta tcccgaaatg
     2761 catggcacag tgacaggctt taaaagcgag attgattatc aggactggat tattgcaaaa
     2821 gccgagcaca ccattgataa cagcggcttt accacgcagc ttgaacttga agcaaaaatc
     2881 ccggaatgga tagcagaaac agaataaatc tcttaaaaat attatttttg agatgtgctt
     2941 ctacactgac agtaagaaca aaagataatg tatcagccca ctagatgtca gaggttgggg
     3001 catcaaccag atgctaacaa taatacggat gtttttccca catgacagag gaagtcaagt
     3061 ataatcttca cagtccatcc cgtccaaggg aatatgactc aatagtaaaa gttccagttt
     3121 agttagtaga cccacacttt atagaagagt aattcatgat tggacaattt ttaagtgcaa
     3181 cagagatttt agcaaagaac tatgttcgta ataaaatggt taaaaatcca ttttattcga
     3241 atttaaaatg gaattttatt gaaaaaaaca tcataagatt aacatcctca ccggttaaat
     3301 cagtactttg catatcagct ttttcatttg tactacttta tgttggatat ttaaacgaat
     3361 tatttataaa aaataatctt ttacattatt tcccgtttag gcattcatta accgaatggc
     3421 aaacaaccat tttaagtggc caattgacaa ttattggtat tgtatacccc cttgttatag
     3481 gtttagtaag tatcttattc caaaaaaagg cagatagaaa aatagcccaa actgcttatc
     3541 agcgttactc aggattcatg cttgctggac tcagcgggct tttcttatca ggatttatac
     3601 ttctcagtgt actaattaaa actgtctttg gaagttatct ttatggtata gcttgtctaa
     3661 tcagcatatt atggcttttg ataaacatag ttctttctat ttggttcttt atcgtgagtc
     3721 ttgaaattct tgatgatgta aaacggcaaa taattataaa gcgatacatt gccttcgaaa
     3781 tagtaatgcc ccatatttgt aacaaaatct cagccaagct taggttatac cctatctatc
     3841 aaaaacataa ctattcaaat ttagaaatca agcaagccga ttacaaagga gaatacatat
     3901 ctgtggctag cagttattct aaggaagatg agttaagttt atatcaccgt ccttttcaac
     3961 ttactcttaa tcttattaat taccaactaa aaaagaagaa tcattttgcg tcatttgtca
     4021 ttggtgataa tcgtacaaaa gaaacagaat ccacgggtaa gatacttttt agcgttaaaa
     4081 atatcaaacc agacagctta ttaataaaaa tacttaagca atgtttttat agggctccga
     4141 ttaaaggagg agatttttcc gtaagtctta caatgcaggc tataacagca gatacgtata
     4201 tgtatctgcg ggattctgat ctcattagtt ttgacaatgc tatctctgca ttaattaata
     4261 actttaataa tctctgcgat ttgtattttt ttcaagatga taataccaac aataacttct
     4321 tactgatcac tacagaatta tttgaacgga gttttcaata tgagttttca gatgaagctt
     4381 ataaaatatc aaataattcc atggataaaa ttaatctttc tgaaagattt tttgaattat
     4441 gtctttggag cggagtgcgt attatcaata atagaaaaca tcttatcagc aatgaacttt
     4501 gtatctatat gggaattact cgttcacaat ggtcaatatt aacagaatgg ttccgaaaca
     4561 accaatcact cttaaatgcc tcgcttcgtt cacgttataa tcgtatatta agaacctata
     4621 ccactgtttg ggagcaatat caagaaagca taaactttcg tttctgcaat acagagaatt
     4681 cagatttatt tgaattattt tgcaaaacgc aactacaaga acttccatcg atgattattg
     4741 atgcaacaca gactcgcgat ccttctacta ttgatacagc cgtcgatctt attaaccgat
     4801 ggcagcactc aatgaatatt gacagccatt cggtagaaaa atacagttac aaaggccagc
     4861 tttttaaccc gggttttttc atatccaaaa aactaaactt caattcagac agagagtggt
     4921 tcaatattgc catcataaat gcgttgactg acatgcgtat atgcacatgt ctttatctga
     4981 catcaagaat caatacttct gacaaactaa tgacacatta cattaaactt attttagagg
     5041 gtaaacttat tgaccaaacc ggtggatatg aaactcccac tgaagaaatt gataatgcaa
     5101 gccaactaat caagatatta attagaatct gcctgtggac atggtctgaa aatatggaac
     5161 acaatgggtg gatgaatagt ttagcaaggc gtttacgtga ctatgataaa acagacatgg
     5221 tgatgggcag agtttacagt aatgtttttg actgtggatt tattgatatg gaacaatcat
     5281 gggttcagct attattaatt ttttctaaca agaacgatag cgtatcaaaa gaaataaaag
     5341 aagcaataga aaacaactat ataacatatc gtgagaagca acgactcatt ggagtattat
     5401 caaaaatttg taactccatc gaatacacta aaatcaagct gactttaaca ttggacgatc
     5461 tccaaacaaa aaaagaaaac ttaagaaagt tgcttcaaga gcatattaac atgctaaaga
     5521 aagatcttga tatgagactt caggatgctg ccatagatgt acatcgacta gatagcactg
     5581 cacgtaaaac atcagaacat cttcgtaaac gcatcaagaa aacgctccct ctttcacttt
     5641 tcaaatctat tgattttaag caggctagcg attgtttcac aaaacataag atatctatta
     5701 agatagataa agaaccgtat gccgaaggaa tagaatccat cccttatatc aatgaaggtg
     5761 atattcaagc agacttaatt ctcaaggaca tccagagaat aatactttca aatttattta
     5821 gcactggctg ttcgcaacat accgtaatag aagatttcaa tatgttgatt gatcacataa
     5881 aatcatctgc tgacttggct ggcaaactgg ttcttgtgat gagtaaagag atctttcagc
     5941 aatataatcg tatgcttttc gataatccca acctcagaga actaatgaga aaaaatgatg
     6001 atggctctat gaacataact actgaatccg gtacccgtaa ggtttacttc ttaccatttg
     6061 ttaatcaacc attttctctt gtggtaaagg ataactactt cactaaatta attattagag
     6121 aatatgataa taataagtta gtaaatgtca cttcagagaa tatcaaaagt gactcagata
     6181 aattcaagct aactcttaac tatgagttga atgtagtatt tgaaggaaac gctgatttaa
     6241 aaatagctca ctcgcaaaga gtgacatcag aataatatct ttgacggcgc tccttagagt
     6301 gccgttcgtt tattaactaa tgctaaaaat cattatatag agaaagtcat gtttaaatct
     6361 tagagaatac aacctagaat agtgcaagca ctacaataag agaggtcgct atgttccgtt
     6421 gtccgctttg tggcgcatct gcccgtatcc gcaccagtcg tccggaaaat gattcaaaca
     6481 ccgtgagaca aaagtattat cagtgtaaca atctagaatg cggcgtatgt ttctcaacac
     6541 tggaagcctt ccacaaattc acttcaaagc acgcctcccc cattcactca tcagagggca
     6601 tcc
//
LOCUS       DADMHC010000206         6275 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.209, whole genome shotgun sequence.
ACCESSION   DADMHC010000206 DADMHC010000000
VERSION     DADMHC010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6275
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.209"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            244..585
                     /gene="raiA"
                     /locus_tag="JNZ57_003506"
     CDS             244..585
                     /gene="raiA"
                     /locus_tag="JNZ57_003506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HAY8829587.1"
                     /translation="MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKE
                     PQGFVADATINTPNGVLVASGKHEDMYTAINELINKLERQLNKLQHKGEARRAATSVK
                     DANFVEEVEEE"
     gene            689..736
                     /locus_tag="JNZ57_003507"
     CDS             689..736
                     /locus_tag="JNZ57_003507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829588.1"
                     /translation="MKHTPFFFAFFFTFP"
     gene            836..1996
                     /gene="pheA"
                     /locus_tag="JNZ57_003508"
     CDS             836..1996
                     /gene="pheA"
                     /locus_tag="JNZ57_003508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydratase"
                     /protein_id="HAY8829589.1"
                     /translation="MTSENPLLALREKISALDEKLLALLAERRELAVEVGKAKLLSHR
                     PVRDIDRERDLLERLITLGKAHHLDAHYITRLFQLIIEDSVLTQQALLQQHLNKINPH
                     SARIAFLGPKGSYSHLAARQYAARHFEQFIESGCAKFADIFNQVETGQADYAVVPIEN
                     TSSGAINDVYDLLQHTSLSIVGEMTLTIDHCLLVSGTTDLSTINTVYSHPQPFQQCSK
                     FLNRYPHWKIEYTESTSAAMEKVAQAKSPHVAALGSEAGGTLYGLQVLERIEANQQQN
                     FTRFVVLARKAINVSDQVPAKTTLLMATGQQAGALVEALLVLRNHNLIMTRLESRPIH
                     GNPWEEMFYLDIQANLESAEMQKALKELGEITRSMKVLGCYPSENVVPVDPT"
     gene            complement(2039..3160)
                     /gene="tyrA"
                     /locus_tag="JNZ57_003509"
     CDS             complement(2039..3160)
                     /gene="tyrA"
                     /locus_tag="JNZ57_003509"
                     /EC_number="1.3.1.12"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydrogenase"
                     /protein_id="HAY8829590.1"
                     /translation="MVAELTALRDQIDEVDKALLNLLAKRLELVAEVGEVKSRFGLPI
                     YVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMRESYSSENDKGFKTLCPSLRPVV
                     IVGGGGQMGRLFEKMLTLSGYQVRILEQHDWDRAADIVADAGMVIVSVPIHVTEQVIG
                     KLPPLPKDCILVDLASVKNGPLQAMLAAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGR
                     KPEAYQWFLEQIQVWGARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQ
                     LLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSERNLALIKRYYKRFGEAIELLEQG
                     DKQAFIDSFRKVEHWFGDYAQRFQSESRVLLRQANDNRQ"
     gene            complement(3171..4241)
                     /gene="aroF"
                     /locus_tag="JNZ57_003510"
     CDS             complement(3171..4241)
                     /gene="aroF"
                     /locus_tag="JNZ57_003510"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroF"
                     /protein_id="HAY8829591.1"
                     /translation="MQKDALNNVHITDEQVLMTPEQLKAAFPLSLQQEAQIADSRKTI
                     SDIIAGRDPRLLVVCGPCSIHDPETALEYARRFKALAAEVSDSLYLVMRVYFEKPRTT
                     VGWKGLINDPHMDGSFDVEAGLQIARKLLLELVNMGLPLATEALDPNSPQYLGDLFSW
                     SAIGARTTESQTHREMASGLSMPVGFKNGTDGSLATAINAMRAAAQPHRFVGINQAGQ
                     VALLQTQGNPDGHVILRGGKAPNYSPADVAQCEKEMEQAGLRPSLMVDCSHGNSNKDY
                     RRQPAVAESVVAQIKDGNRSIIGLMIESNIHEGNQSSEQPRSEMKYGVSVTDACISWE
                     MTDALLREIHQDLNGQLTARVA"
     gene            4449..4814
                     /locus_tag="JNZ57_003511"
     CDS             4449..4814
                     /locus_tag="JNZ57_003511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417093.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2799 domain-containing protein"
                     /protein_id="HAY8829592.1"
                     /translation="MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISG
                     SAIKDDDAFGDSQADRGLYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVESASQ
                     LHEVWQKGADENASTIRLN"
     gene            4964..5482
                     /locus_tag="JNZ57_003512"
     CDS             4964..5482
                     /locus_tag="JNZ57_003512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4154 domain-containing protein"
                     /protein_id="HAY8829593.1"
                     /translation="MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTR
                     WPALSGPPKLCIFSSSRFSTALQENAATSLPYLPVIIHTQQEAMISGCNGFYFGNESP
                     TFQMELTEQYPSKALLLIAEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNP
                     DVLMLARKKNDG"
     gene            5472..>6275
                     /gene="dgcN"
                     /locus_tag="JNZ57_003513"
     CDS             5472..>6275
                     /gene="dgcN"
                     /locus_tag="JNZ57_003513"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcN"
                     /protein_id="HAY8829594.1"
                     /translation="MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLT
                     LKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNIL
                     ASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSL
                     AVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFH
                     RFALDFNSLLDEMEEWQLRLQAKNTQLLRTALHDPLTGLANRAAFRSGIN"
BASE COUNT         1704 a         1603 c         1411 g         1557 t
ORIGIN      
        1 ccttgagctg ccgttttttt attctgttag ttgtgaaact gaagcgattt agtcactatc
       61 gatctcatca aatatggctc gctttgagat attcctcaag taaaaaaaca cctcttcctg
      121 cgatttctca caaaaaagat tcgttgacaa aaagtgacaa aattatgaga ttcccatcac
      181 acattttgac atcaggaacg gtatgctgaa ttcaccaaga cgggaagaca agaggtaaaa
      241 tttatgacaa tgaacattac cagcaaacaa atggaaatta ctccggccat ccgccaacat
      301 gtcgcagacc gtctcgccaa actggaaaaa tggcaaacac atctgattaa tccacatatc
      361 attctgtcca aagagccaca agggtttgtt gctgacgcca caatcaatac acctaacggc
      421 gttctggttg ccagtggtaa acatgaagat atgtacactg caattaacga attgatcaac
      481 aagctggaac ggcagctcaa taaactgcag cacaaaggcg aagcacgtcg tgccgcaaca
      541 tcggtgaaag acgccaactt cgtcgaagaa gttgaagaag agtagtcctt tatattgagt
      601 gtatcgccaa cgcgccttcg ggcgcgtttt ttgttgacag cgtgaaaaca gtacgggtac
      661 tgtactaaag tcacttaagg aaacaaacat gaaacacaca ccgtttttct tcgcattctt
      721 ttttaccttc ccctgaatgg gaggcgtttc gtcgtgtgaa acagaatgcg aagacgaaca
      781 ataaggcctc ccaaaccggg gggccttttt tattgataac aaaaaaggca acactatgac
      841 atcggaaaat ccattactgg cgctgcgaga gaaaatcagc gcgctggatg aaaaattatt
      901 agcattactg gcagagcggc gcgaactggc cgtcgaggtg ggaaaagcca aactgctctc
      961 gcatcgcccg gtacgagata ttgatcgtga acgcgattta ctggaaagat taattacgct
     1021 cggtaaagcg caccatctgg acgcccatta cattactcgc ctgttccagc tcatcattga
     1081 agattccgta ttaactcagc aggctttgct ccagcaacat ctcaataaaa ttaatccgca
     1141 ctcagcacgc atcgcttttc tcggccccaa aggttcttat tcccatcttg cggcgcgcca
     1201 gtatgctgcc cgtcactttg agcaattcat tgaaagtggc tgcgccaaat ttgccgatat
     1261 ttttaatcag gtggaaaccg gccaggccga ctatgccgtc gtaccgattg aaaataccag
     1321 ctccggtgcc ataaacgacg tttacgatct gctgcaacat accagcttgt cgattgttgg
     1381 cgagatgacg ttaactatcg accattgttt gttggtctcc ggcacgactg atttatccac
     1441 cattaatacg gtctacagcc atccgcagcc attccagcaa tgcagcaaat tccttaatcg
     1501 ttatcctcac tggaagattg aatataccga aagtacgtct gcggcaatgg aaaaggttgc
     1561 acaggcaaaa tcaccgcatg ttgctgcgtt gggaagcgaa gctggcggca ctttgtacgg
     1621 tttgcaggta ctggagcgta ttgaagcgaa tcagcaacaa aacttcaccc gatttgtggt
     1681 gttggcacgt aaagccatta acgtgtctga ccaggttccg gcgaaaacga cgttgttaat
     1741 ggcgaccggg caacaagccg gtgcgctggt tgaagcgttg ctggtgctgc gcaaccacaa
     1801 tctgattatg acccgtctgg aatcacgccc gattcacggt aatccatggg aagagatgtt
     1861 ttatctggat attcaggcca atcttgaatc agcggaaatg caaaaagcat tgaaagagtt
     1921 aggggaaatt acccgttcaa tgaaggtatt gggctgttac ccaagtgaga acgtagtgcc
     1981 tgttgatcca acctgatgaa aaggtgccgg atgatgtgaa tcatccggca ctggattatt
     2041 actggcggtt gtcattcgcc tgacgcaata acacgcggct ttcactctga aaacgctgtg
     2101 cgtaatcgcc gaaccagtgc tccaccttgc ggaaactgtc aataaacgcc tgcttatcgc
     2161 cctgctccag caactcaatc gcctcgccga aacgcttata gtaacgtttg attaacgcca
     2221 gattacgctc tgacgacata ataatgtcgg cataaagctg cggatcctga gcaaacagtc
     2281 gcccgaccat cgccagctca aggcggtaaa tcggcgaaga gagcgccaga agttgctcaa
     2341 gctgaacatt ttcttctgcc agatgcagcc cataagcaaa agtagcaaag tggcgcagag
     2401 cctgaataaa cgccatattc tgatcgtgct cgacagcgct aatacgatgc agccgagcgc
     2461 cccagacctg aatttgctcc agaaaccatt ggtatgcttc cggcttacgt ccatcacacc
     2521 agaccacaac ttgctttgcc aggctaccgc tgtccgggcc gaacatcggg tgtaacccca
     2581 ataccgggcc atcgtgcgcc gccagcatgg cctgtaatgg tccatttttc actgatgcca
     2641 gatcaaccag aatacaatct ttcggtaaag gcggtaattt gccgataact tgctcagtaa
     2701 cgtggattgg cacactaaca atcaccattc cggcatcggc aacaatatca gccgctcgat
     2761 cccagtcatg ttgctccaga atccgcacct gataacccga gagtgtcagc atcttctcga
     2821 acaggcgtcc catctgaccg ccaccgccga cgataaccac cggacgcagt gacggacaaa
     2881 gtgttttaaa tcctttgtcg ttttcactgg agtaagattc acgcatcacc cgacgcaaaa
     2941 catcctcaat cagatctggc ggtacaccca gagcttccgc ctctgcacga cgcgaggcca
     3001 acatagatgc ctcgcgctcc ggaacataaa taggcagtcc aaagcggctt ttcacctcgc
     3061 ccacttcagc aaccagttcc agacgcttcg ctaataaatt cagcagcgct ttatcgactt
     3121 catcaatttg atcgcgtaat gcggtcaatt cagcaaccat aataaacctc ttaagccacg
     3181 cgagccgtca gctgcccgtt cagatcctga tgaatttcac gcagcaaggc atcggtcatt
     3241 tcccagctaa tgcaggcatc ggttacggat acaccgtatt tcatttcact gcgcggttgc
     3301 tcagaagact gattgccctc gtggatatta ctttcgatca tcagaccaat aattgagcga
     3361 ttgccatctt tgatttgagc aaccacggat tctgccaccg caggctgacg gcgataatct
     3421 ttattggaat taccgtggct gcaatctacc atcagagacg ggcgcagtcc cgcctgttcc
     3481 atctcttttt cacattgcgc aacatccgca gggctatagt tcggcgcttt accaccgcgc
     3541 aggatgacat gcccgtccgg attcccctga gtttgtagca acgcaacctg ccctgcctgg
     3601 ttaatgccaa caaaacggtg cggctgggcg gcggcgcgca tagcgttaat tgctgttgcc
     3661 agactgccgt cggtgccgtt tttaaaacca accggcatgg aaagcccgga ggccatttca
     3721 cggtgagttt gcgattccgt tgtacgagca ccaattgctg accagctaaa cagatcgccc
     3781 aggtattgcg ggctattcgg atctaacgct tccgtcgcca gtggcagtcc catattcacc
     3841 agctcaagca gcaatttacg cgcgatctgc agcccggctt ctacatcaaa agagccatcc
     3901 atatggggat cgttaattaa ccctttccag ccgacagtgg tacggggttt ttcaaaatag
     3961 acgcgcatta ccagatagag gctatcgctg acctctgcgg caagggcttt aaatcgacga
     4021 gcatattcca gagcagtttc cggatcatga atggaacaag gaccacaaac taccagcaga
     4081 cgaggatcgc gcccggcgat aatatctgaa atggttttac gcgagtcagc aatctgggct
     4141 tcttgttgca ggctcaatgg aaaagcggcc ttcagttgtt ccggagtcat taaaacctgt
     4201 tcgtcggtaa tatgtacgtt attcagcgcg tctttttgca tgatggcgat cctgtttatg
     4261 ctcgtttgcg atagttgatc ctcagcgagg atgacgtaac gataacacac aaagtaaagt
     4321 tttcaatcca tatttcgtac gcttttcttt acacgaacaa tttactcgcg ctttgatgct
     4381 tatttcgtac aaataaattt acacctcctt taaaaacaat ccgctatgct ttgaaaaagg
     4441 agaaagaaat gatgaaaaag tttatcgccc ccttattggc tttactggtt agcggatgtc
     4501 agattgatcc ttatactcac gcgccaacct tgaccagcac cgactggtat gatgtcggta
     4561 tggaagatgc gatatcgggc agcgccataa aagatgacga tgcatttggc gattcacagg
     4621 cggatcgcgg tctatacctt aaaggatatg ccgaaggaca aaagaaaact tgccagaccg
     4681 attttactta tgcccgggga ctttccggta aaagctttcc tgccagctgt aacaatgttg
     4741 aaagtgccag ccaactgcat gaagtatggc aaaaaggggc tgatgaaaat gccagcacaa
     4801 tacgattaaa ttaattaaaa ccccacaaat aaattaaaca taagatttta ctcattgtgt
     4861 tttatttctc acattgatga cgatcgcatg aaaaaatgat attttaatga acattctgaa
     4921 aaaatatcga tgcatttcga gcgaagaagg tggggatccc tgaatgcgtt tttctcaccg
     4981 actgttctta cttctgattc tcctgctgac gggagcacca atactcgctc aggagccttc
     5041 tgacgttgcg aaaaacgtgc gtatgatggt ttccggtatt gtcagttaca cccgctggcc
     5101 tgcgctatca gggccaccaa agttatgtat cttttcatct tcacgtttta gtaccgccct
     5161 acaagagaat gccgcgacat ctttgcctta tctgcctgtc atcattcaca ctcaacaaga
     5221 ggcgatgatt tcaggctgca atggttttta ttttggcaac gagtcaccga cattccagat
     5281 ggaattaacc gaacaatatc cgtcaaaggc gttattatta attgccgaac aaaataccga
     5341 gtgcattatt ggtagcgcct tttgtctgat catccacaat aatgacgtca gatttgccgt
     5401 aaacctggat gccttatcgc gtagcggtgt aaaggtcaac ccggatgtct taatgctcgc
     5461 acggaagaaa aatgatggat aacgataatt ctcttaataa gcgccccacg tttaaaagag
     5521 cattacgcaa catcagtatg accagcatat ttatcactat gatgctgatc tggttgctgc
     5581 tttccgtgac ctcggtgctg accctgaaac agtacgcgca aaaaaacctg gcactgacag
     5641 cagcaacaat gacttacagt ctggaagcag ctgtcgtttt tgccgatggc cctgcagcaa
     5701 ctgaaacact ggcagcgctg ggccagcaag ggcaattttc aactgcagaa gtacgtgata
     5761 agcagcaaaa tattctggcg tcctggcatt acacccgtaa ggatccaggc gatactttca
     5821 gcaatttcat aagccactgg ctcttccccg cccccatcat tcagccgatt cgtcacaatg
     5881 gtgaaaccat tggcgaagta cgcttaaccg ctcgcgacag ttcaatcagc cattttatct
     5941 ggttttcgct cgccgtactg accggttgta ttctgctggc atcaggcatc gcaattaccc
     6001 tcacccgcca tttgcacaat ggcctggtgg aagcgctgaa aaatatcacc gatgtcgtac
     6061 atgatgtgcg ttccaaccgc aatttttccc gacgagtttc tgaagaacgt atcgctgagt
     6121 ttcaccgctt cgctctcgac ttcaacagtc tgctggatga aatggaagag tggcagcttc
     6181 gtttacaggc caaaaatacg cagcttctgc gtaccgcgct acatgaccca ttaaccgggc
     6241 tggctaaccg cgcagcgttt cgtagcggca tcaat
//
LOCUS       DADMHC010000207         6142 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.210, whole genome shotgun sequence.
ACCESSION   DADMHC010000207 DADMHC010000000
VERSION     DADMHC010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6142)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6142)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6142
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.210"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(164..814)
                     /gene="zinT"
                     /locus_tag="JNZ57_003514"
     CDS             complement(164..814)
                     /gene="zinT"
                     /locus_tag="JNZ57_003514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-binding protein ZinT"
                     /protein_id="HAY8829595.1"
                     /translation="MAIRLHKLAVALGVFIVSAPAFSHGHHSHGKPLTEVEQKAANGV
                     FDDANVQNRTLSDWDGVWQSVYPLLQSGKLDPVFQKKADADKTKTFAEIKDYYHKGYA
                     TDIEMIGIEDGIVEFHRNNETTSCKYDYDGYKILTYKSGKKGVRYLFECKDPESKAPK
                     YIQFSDHIIAPRKSSHFHIFMGNDSQQSLLNEMENWPTYYPYQLSSEEVVEEMMSH"
     gene            complement(1071..1706)
                     /gene="msrQ"
                     /locus_tag="JNZ57_003515"
     CDS             complement(1071..1706)
                     /gene="msrQ"
                     /locus_tag="JNZ57_003515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HAY8829596.1"
                     /translation="MRLTAKQVTWLKVSLHLAGLLPFLWLVWAINHGGLGADPVKDIQ
                     HFTGRTALKFLLATLLITPLARYAKQPLLIRTRRLLGLWCFAWATLHLTSYALLELGV
                     NNLALLGKELITRPYLTLGIISWVILLALAFTSTQAMQRKLGKHWQQLHNFVYLVAIL
                     APIHYLWSVKIISPQPLIYAGLAVLLLALRYKKLRSLFNRLRKQVHNKLSV"
     gene            complement(1707..2711)
                     /gene="msrP"
                     /locus_tag="JNZ57_003516"
     CDS             complement(1707..2711)
                     /gene="msrP"
                     /locus_tag="JNZ57_003516"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HAY8829597.1"
                     /translation="MKKNQFLKESDVTAESVFFMKRRQVLKALGISAAALSLPHAAHA
                     DLLSWFKGNDRPPAPAGKPLEFSKPAAWQNNLPLTPVDKVSGYNNFYEFGLDKADPAA
                     NAGSLKTDPWTLKISGEVAKPLTLDHDDLTRRFPLEERIYRMRCVEAWSMVVPWIGFP
                     LHKLLALAEPTSNAKYVAFETIYAPEQMPGQQDRFIGGGLKYPYVEGLRLDEAMHPLT
                     LMTVGVYGKALPPQNGAPVRLIVPWKYGFKGIKSIVSIKLTRERPPTTWNLAAPDEYG
                     FYANVNPHVDHPRWSQATERFIGSGGILDVQRQPTLLFNGYADQVASLYRGLDLRENF
                     "
     gene            complement(2820..3233)
                     /gene="hiuH"
                     /locus_tag="JNZ57_003517"
     CDS             complement(2820..3233)
                     /gene="hiuH"
                     /locus_tag="JNZ57_003517"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HAY8829598.1"
                     /translation="MLKRYLVLSVATAAFSLPSLVYAAQQNILSVHILNQQIGKPAAD
                     VTVTLEKKSDNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLES
                     FFPEIPVEFHINKVNEHYHVPLLLSQYGYSTYRGS"
     gene            3366..4037
                     /gene="hprR"
                     /locus_tag="JNZ57_003518"
     CDS             3366..4037
                     /gene="hprR"
                     /locus_tag="JNZ57_003518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707854.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor HprR"
                     /protein_id="HAY8829599.1"
                     /translation="MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDD
                     YALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPF
                     SFSELLARVRAQLRQHHALNSTLEISGLRMDSVSQSVSRDNISITLTRKEFQLLWLLA
                     SRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSF
                     VAVKK"
     gene            4037..5395
                     /locus_tag="JNZ57_003519"
     CDS             4037..5395
                     /locus_tag="JNZ57_003519"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal sensor histidine kinase"
                     /protein_id="HAY8829600.1"
                     /translation="MKRLSITVRLTLLFILLLSVAGAGIVWTLYNGLASELKWRDDTT
                     LINRTAQIKQLLIDGVNPDTLPVYFNRMMDVSQDILIIHGDGINKIVNRTNVSDGMLN
                     NIPASETISAAGIYRSIINDTEIDALRINIDEVSPSLTVTVAKLASARHNMLEQYKIN
                     SIIICIVAIVLCSVLSPLLIRTGLREIKKLSGVTEALNYNDSREPVEVSVLPRELKPL
                     GQALNKMHQALVKDFERLSQFADDLAHELRTPINALLGQNQVTLSQTRSIAEYQKTIA
                     GNIEELENISRLTENILFLARADKNNVLVKLDSLSLNKEVENLLDYLEYLSDEKEICF
                     KVECNQQIFADKILLQRMLSNLIVNAIRYSPEKSRIHITSFLDTNGYLNIDVASPGTK
                     IHEPEKLFRRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSATYHYLNKHNVFRIMLPQ
                     RN"
     gene            complement(5503..>6142)
                     /gene="hchA"
                     /locus_tag="JNZ57_003520"
     CDS             complement(5503..>6142)
                     /gene="hchA"
                     /locus_tag="JNZ57_003520"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="protein deglycase HchA"
                     /protein_id="HAY8829601.1"
                     /translation="GNHPIETLLPLYHLHAAGFEFEVATISGLMTKFEYWAMPHKDEK
                     VMPFFEQHKSLFRNPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVAAALQW
                     AIKNDRFVISLCHGPAAFLALRHGDNPLNGYSICAFPDAADKQTPEIGYMPGHLTWYF
                     GEELKKMGMNIINDDITGRVHKDRKVLTGDSPFAANALGKLAAQEMLAAYAG"
BASE COUNT         1704 a         1299 c         1425 g         1714 t
ORIGIN      
        1 tccgttattg gttaactcaa tgcgggttag cttattaata tacagacacg tcatagtgat
       61 gagcgtgtct gtagctagct tgcgttcagt ggcgtttgtg gatggaccag tggcagttat
      121 gatgacttac taaagcggca tcgaggcgtt atcatgagaa tactcaatga gacatcattt
      181 cctcgaccac ttcttcgcta ctcaactgat atggataata cgttggccag ttttccattt
      241 catttaataa agattgctgt gaatcattac ccataaaaat gtgaaaatga gatgattttc
      301 gtggtgcaat tatatgatcg ctaaattgta tatatttagg ggctttgctt tcaggatctt
      361 tacattcgaa taagtaacga acgcctttct tgcctgattt ataggtgagt attttgtatc
      421 catcgtaatc atatttacag gatgttgttt cattatttct atggaattca acaatgccgt
      481 cctcaatgcc aatcatctcg atatctgttg cataaccttt gtgataataa tctttaattt
      541 cagcaaatgt tttagtttta tctgcatccg ctttcttctg aaagacgggg tcaagtttgc
      601 cactttgcag taaaggataa acggattgcc agactccatc ccagtcactg agcgttcggt
      661 tttgtacatt ggcatcatca aaaacaccat tagcagcttt ttgttcgacc tctgttaagg
      721 gtttgccgtg tgagtgatga ccatgcgaaa aggcaggagc gctaacaata aagacaccta
      781 acgcaacagc cagtttgtga agacgaatcg ccaaaacagt ttcctccaga gtcattgtat
      841 atgatgtgta atgttatatt gtaacatgtg gcaaaatgca acaactctta ggagatgaga
      901 gcatagtttt ctcaggtgta cttatctatc ttattgaaat aaaatgaatt atattgataa
      961 tttgaggttg atgacaaacg aaacataatc tgatgtgatc tgcgtaggcc ggatagggcg
     1021 ctcgcgccgc atccggcagg gataacgcgt actttgtcgg caatatgaag ttatacagat
     1081 aatttgttgt gaacctgctt gcgtaaccgg ttaaaaaggg aacgcaactt cttataccgt
     1141 aaggctaaaa gtagtacagc cagcccagcg tagatgagcg gctgcggtga aataatcttc
     1201 actgaccaca gataatgtat tggggccagg atcgcgacaa gatagacgaa attatgcaac
     1261 tgttgccagt gcttgccgag ttttcgctgc atcgcctggg ttgaagtaaa cgctaaagca
     1321 agcaaaataa cccagctgat aattcctaac gttaaataag gccgggtaat taactccttg
     1381 cctaataacg ccagattatt cacgcccagc tccagcaatg cgtaactggt taaatgcagt
     1441 gtcgcccagg caaagcacca taagcctaac aggcggcgag tgcgtatcaa taacggctgt
     1501 tttgcgtagc gtgccagagg tgtgattaac aaggtcgcca gcaaaaattt cagtgcagtg
     1561 cgaccggtaa aatgctgaat atctttcacc ggatcggcac ccagtccacc gtgattgatc
     1621 gcccagacca gccagagaaa cggcaacaat ccggcaagat gcaggctaac tttcagccat
     1681 gtcacctgtt ttgctgtcag acgcattcag aaattctccc gcaaatccag gccacgatac
     1741 agcgatgcca cctggtcggc gtaaccatta aacagtagcg ttggctggcg ctgaacatcg
     1801 aggatgccgc ctgaaccaat aaatcgttcg gtagcctgtg accagcgcgg gtgatcaaca
     1861 tgcggattaa cgttggcgta aaaaccgtat tcgtcaggcg ctgccagatt ccaggtggtt
     1921 ggcggacgct cgcgggtcag cttaatactg actatcgatt taatcccttt aaagccatat
     1981 ttccacggca caatcagtcg taccggcgcg ccattttgtg gcggtaacgc cttgccataa
     2041 acacccacgg tcatcagtgt gagcggatgc attgcttcgt cgagacgcaa tccttcgaca
     2101 taaggatatt tcagcccgcc gccgataaag cggtcctgct ggcctggcat ttgttccggt
     2161 gcataaattg tttcgaaagc gacatacttc gcattgctgg tgggttcggc aagcgccagc
     2221 aatttgtgca gcggaaaacc aatccacggc accaccatcg accatgcctc cacgcagcgc
     2281 atacgataaa tacgctcttc cagcgggaag cgacgggtta aatcatcgtg atcgagggtc
     2341 aatggttttg ccacttcgcc gctgattttc agtgtccatg gatcggtttt caggctacca
     2401 gcattagcgg cgggatcggc tttatccagc ccgaattcat agaagttgtt ataaccggag
     2461 actttatcta ctggcgtcag tggcaggtta ttttgccagg cggcaggctt gctgaactcc
     2521 agcggttttc cggcgggggc gggcgggcga tcgttccctt taaaccagct aagcagatcg
     2581 gcatgcgcag cgtgaggcaa agaaagtgca gctgcactga tgcccagtgc ttttaacacc
     2641 tgccgacgct tcataaagaa taccgactcg gccgtaacat ctgattcttt taaaaattga
     2701 ttctttttca taagccatca cacttttttg tcgttagcca gcaagagccg tttactgtta
     2761 atctgtcagg gagtgtcctc cctaacagta gcagagatct gcttttacat atttatgcat
     2821 taactgccac gataggttga atacccatat tggctaagta ataaaggcac atgataatgc
     2881 tcgttcactt tattaatatg aaattcaacg gggatctcag ggaagaaact ttcaagattt
     2941 tgtttcttga aatagtcccc ggttttaaat acgacacggt aatcgcccgt agttgcagtt
     3001 tgctcgggcc acagtgcctt aattcgtcca tccttatctg ttttggcggt attaagttgt
     3061 aaccagccgt tgtccgattt cttttcaaga gtgactgtca cgtcggcagc gggttttcct
     3121 atttgctggt tcaaaatgtg cacgctaaga atgttttgtt gtgcggcata aaccaaagaa
     3181 ggtaatgaaa atgctgccgt tgctaccgag agtactaaat aacgctttaa catgtttata
     3241 tccttgtcat gtgaatgagt tttgaggata gcgaaaaaat gtccagggta accttacagc
     3301 agcattacaa ttttgtaatg aaccaggctg tttctataac atatgattta tggcatatta
     3361 ttttcatgaa gattttactt attgaagata atcaaaggac ccaggaatgg gtaacacaag
     3421 ggctttccga agcgggttat gtcattgatg ccgtttctga tggcagagat gggctttatc
     3481 ttgcgctgaa ggatgattat gcattgatca ttctggatat tatgcttccg ggtatggatg
     3541 gctggcagat cttacaaacg ttaagaacag caaagcaaac ccctgttatt tgccttactg
     3601 caagggattc tgtcgatgac agagtcagag ggctggacag tggagcaaat gattatctgg
     3661 taaaaccttt ttcattttct gagttgctgg caagggttcg ggcacaatta aggcaacatc
     3721 acgctttgaa ttcaacatta gaaatcagtg gcttaagaat ggactctgta agtcaaagtg
     3781 tgagcaggga caatatcagt attacactga cgcgcaagga gtttcagtta ctttggctac
     3841 tggcctccag agctggcgaa attataccca gaacggttat tgcgagtgaa atttggggaa
     3901 tcaactttga tagtgatacc aatacggtgg atgtcgccat tcgcaggctc cgcgcaaaag
     3961 ttgatgatcc ttttcctgaa aagctaatcg ccacaatacg ggggatgggc tattcattcg
     4021 tagcggtaaa aaaataatga aaagattgtc tataaccgtc cgtttaacct tgctttttat
     4081 attgctgctg tctgttgctg gcgctggaat tgtatggact ctctataatg gcctggcaag
     4141 tgagttgaaa tggcgcgatg atacaacact cattaaccgg acagcgcaga tcaagcagtt
     4201 gttaattgat ggggtaaatc cagatacgtt acctgtgtac tttaaccgga tgatggatgt
     4261 tagtcaggat atcttgatca ttcatggtga tggtatcaat aaaattgtta accggacaaa
     4321 tgtcagtgat ggcatgttaa ataacatacc tgctagtgag acaatcagcg cagctggcat
     4381 ttacagaagc attattaatg acactgagat tgatgcttta cgaattaata ttgatgaagt
     4441 ttcgccatca ttaacggtta ctgtggctaa attggcttca gccagacata acatgcttga
     4501 acagtataaa attaatagca ttataatttg cattgtcgcc attgtacttt gctcagtatt
     4561 aagtccgctg ttaatcagaa cgggattacg agagatcaaa aagttgagtg gtgtaacgga
     4621 agcgctgaat tataacgata gccgggagcc tgttgaggtt agcgtattac cgagagaact
     4681 aaaacctctt gggcaggcgt tgaataaaat gcatcaagcc ttagtcaaag attttgaacg
     4741 cctaagtcaa tttgctgacg atctcgctca tgaacttaga acgcccatta atgcattact
     4801 gggtcagaat caggttacgc tcagtcaaac cagaagtatc gctgaatatc aaaaaacaat
     4861 tgccggtaac attgaagagc tggaaaatat ttcgcggtta acagagaaca tactgtttct
     4921 tgcccgggca gataaaaaca atgttttggt gaaactggac tcgctttctc tcaataagga
     4981 agtcgaaaat ttgttggatt atcttgaata cctttcagac gagaaagaga tttgctttaa
     5041 ggtcgagtgc aatcagcaaa tctttgcgga taaaatttta ctgcaacgaa tgttatcgaa
     5101 tcttattgtt aatgccatta gatattcacc agaaaaatcg cgtattcata taaccagttt
     5161 tcttgatacc aacggctatc ttaatattga tgtcgccagt cctggaacga aaattcatga
     5221 gcctgaaaaa ctcttccgta gattttggcg gggagataat tcgcgtcatt ccgtaggtca
     5281 gggacttggt ctttctttag tcaaagcgat tgccgaatta catggaggaa gtgctacgta
     5341 tcactatctc aataaacata atgtgttccg gattatgtta ccgcaaagaa attaacatag
     5401 ggcttcagta cgccataaat caaccatgaa aaaacgcagc cacgtcgtga gtattaacgt
     5461 ggctgcgatt gattatgcgc ttacattcat acgtaacagg gattaacccg cataagctgc
     5521 cagcatttcc tgcgccgcca gtttacccaa cgcattcgct gcgaaaggac tgtcgccggt
     5581 gagaacttta cggtccttat gtactcgccc ggtgatgtcg tcattaataa tgttcatgcc
     5641 cattttcttc agctcttcgc cgaagtacca ggtgagatga cccggcatat agcctatctc
     5701 tggcgtttgt ttgtctgcgg cgtctgggaa tgcgcaaatg gaataaccat tcagtgggtt
     5761 atcgccgtgg cgaagcgcca gaaaagccgc cgggccgtgg caaagggaga taacaaaacg
     5821 gtcatttttg attgcccact gtaaagcggc agctacgtcc tggctttcag gtaaaccaat
     5881 aagtgcgcca tgaccaccag gaacaaagat tgctgcatat tcgctatcag cgttgaggct
     5941 ggcgacaaca tccgcgagtt tcttcggatt gcggaacaac gatttatgct gctcaaagaa
     6001 tggcattact ttttcatctt tgtgcggcat agcccagtat tcaaacttgg tcatcagacc
     6061 ggaaatggtc gccacttcga attcgaaacc tgcagcatgg agatgataca acggcagcaa
     6121 cgtttcaatc ggatggttac cg
//
LOCUS       DADMHC010000208         6071 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.211, whole genome shotgun sequence.
ACCESSION   DADMHC010000208 DADMHC010000000
VERSION     DADMHC010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6071)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6071)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6071
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.211"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..621)
                     /locus_tag="JNZ57_003521"
     CDS             complement(<1..621)
                     /locus_tag="JNZ57_003521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
                     /protein_id="HAY8829602.1"
                     /translation="MKGLLSLLISSMIFPVHAGMVIFGTRIIYPAEQKEVMVKLMNQG
                     NRSSLMQAWIDDGDTSLPPEKIQVPFMLTPPVVKVAANSGQQIKIKIMPNKLPSNKES
                     IFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLINRSGNG
                     LVIKNDSANWVTISDVKANNVKVNYETIMIAPLESQSVNVKSNNANN"
     gene            complement(709..1251)
                     /locus_tag="JNZ57_003522"
     CDS             complement(709..1251)
                     /locus_tag="JNZ57_003522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8829603.1"
                     /translation="MKHSIIVVAVLSSVFMSAGIFAAEVDTGTLTIKGNIAESPCTFV
                     AGGDSVSINMPTVPTTVFDGKAKYSTYDGVVGVTSSMLKITCPKTIDGVKLSLITNEK
                     ILGNDKAISSSNDTVGYYLYLGDSSDVLDISAPFNIESYKTADGQYAIPFKAKYLKLI
                     DSGVASGTVNSSLVMRVAQD"
     gene            complement(1550..1831)
                     /locus_tag="JNZ57_003523"
     CDS             complement(1550..1831)
                     /locus_tag="JNZ57_003523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2574 family protein"
                     /protein_id="HAY8829604.1"
                     /translation="MNKYWLSGIIFLAYGLASPAFSSETATLTINGRISSPTCSMDVV
                     NNHLQQRCGQLLQRVETNYRASSTAKGVTTEVVTVGNNDKRKIVLNRYD"
     gene            complement(2094..3203)
                     /gene="apbC"
                     /locus_tag="JNZ57_003524"
     CDS             complement(2094..3203)
                     /gene="apbC"
                     /locus_tag="JNZ57_003524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310946.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HAY8829605.1"
                     /translation="MNEQSQAKSPEALRAMVAGTLANFQHPTLKHNLTTLKALHHVAW
                     MDDTLHVELVMPFVWHSAFEELKEQCSAELLRITGAKAIDWKLSHNIATLKRVKNQPG
                     INGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQ
                     RPTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDY
                     LVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVE
                     NMSVHICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRP
                     ESEFTAIYRQLADRVAAQLYWQGEVIPGEISFRAV"
     gene            3335..5368
                     /gene="metG"
                     /locus_tag="JNZ57_003525"
     CDS             3335..5368
                     /gene="metG"
                     /locus_tag="JNZ57_003525"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HAY8829606.1"
                     /translation="MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGH
                     EVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEE
                     NRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCE
                     VCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANK
                     MQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSV
                     SFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKM
                     SKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVN
                     LASRNAGFINKRFDGVLASELADPQLYRTFTDAAEVIGEAWESREFGKAVREIMALAD
                     LANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPKLTERAEAFLN
                     TELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAPVTGPLADDP
                     IQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQ
                     ALIGRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK"
     gene            5509..>6071
                     /locus_tag="JNZ57_003526"
     CDS             5509..>6071
                     /locus_tag="JNZ57_003526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001215584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WGR domain-containing protein"
                     /protein_id="HAY8829607.1"
                     /translation="MRHFIYQDEKSHKFWAVEQQGNELHINWGKVGTNGQSQIKSFAD
                     AAAAAKAELKLIAEKTKKGYVENASANVHIPPITKATPEVETSPESKNQRPWLADDAV
                     IRLTDDINRFAFPHRSRPREINYLHKDGQIWQLIANNTRAYDPANNYRSYPENWQQAF
                     AELQMRVQGNQQTGSAQSDAALLWSFW"
BASE COUNT         1651 a         1446 c         1380 g         1594 t
ORIGIN      
        1 gttgtttgca ttattacttt tgacattaac actctgactt tctaaggggg caatcataat
       61 agtttcataa ttgactttga cattattagc tttgacatcc gaaatcgtca cccaattagc
      121 tgagtcattt tttatcacca atccattgcc actgcgattt atcagtaact ttttaaaggt
      181 cgctttattc accggagcaa tacccgccgg ccggtaaaac aatttgattc tgttttgcat
      241 cgcaaacttc agtgcattct taccttcttg ttctggacta ttcggtggaa tatccagaac
      301 attaagataa aaaatacttt ccttattact gggtaattta ttaggcatga ttttaatttt
      361 tatttgttgc ccagaattgg ccgctacttt cactactggt ggcgttaaca tgaaaggaac
      421 ctgaatcttt tctggcggca gagacgtgtc gccatcatca atccacgcct gcatcagcga
      481 agagcggttt ccctgattca tcagttttac catgacctct ttctgctctg ccgggtaaat
      541 gatacgggtc ccgaaaataa ccattccggc atgcacgggg aatatcatag aagagatgag
      601 taaagataat aaccctttca tcttaatgcc tcttatattt atgctggccg ccatgaatat
      661 ggcggccatt ttaacttact gaaaaaacaa gatgattatt ttaaatattt aatcctgggc
      721 aacacgcata accaatgaag agttaacagt accagatgca acaccactgt caatcaactt
      781 cagatatttt gccttaaacg gtattgcata ttgtccatca gcagttttat aactttcaat
      841 attaaatggt gcggaaatat ccagtacgtc actgctatct cccaaataga gatagtatcc
      901 aactgtgtca ttactactgg atattgcctt atcattacca agaattttct cgttggtgat
      961 caacgaaagt tttacgccat caatagtctt cggacaagta attttcagca tactgctggt
     1021 tacaccaacc acgccatcat aagttgaata tttcgcttta ccatcaaata cagtggtggg
     1081 tacagtcggc atattaatac tgactgaatc accgccagcg acaaatgtac atggtgattc
     1141 agcaatatta cctttaatgg ttaaagttcc ggtatctact tcagcagcga aaataccagc
     1201 actcataaat acagaagata agacagcgac aacaataatt gaatgtttca tgatgcattc
     1261 cttaataagt ttattttgtt ttgttaagag tctgtatctc ttggaaacaa atttctcaca
     1321 tcaaaaaagt tgccgcaatg taaacatatt gttttgttga tttaaaacaa attaactaat
     1381 gcgatataaa tacaacaaat aattcgctat aacaaacatt tttgaaactg attaattacc
     1441 gtaaattacc gtaaataaca ttcatgaggt gaataaaaaa gccaaaatca ttcataggaa
     1501 tgattttggc tttttaaata tgcttaatgc ttaaaacggt gttggcaaat taatcgtagc
     1561 gatttaacac gattttgcgt ttgtcgttat tacccacagt taccacttct gtcgtaacgc
     1621 cttttgcagt agaagaagca cgatagttgg tttcaactcg ttgtaacaac tgcccacaac
     1681 gttgctgaag atgattatta acaacatcca tactgcatgt aggggaacta attctgccat
     1741 tgatggttaa tgttgcagtc tctgaagaga acgcgggaga agccaatcca taggcaagaa
     1801 aaataattcc tgacagccaa tacttattca ttgaacgtta tccctgtagt aaaggttatg
     1861 cctggataga atgagtgcat aacaaactat agctgtacat ccactacaca gccacgaagg
     1921 atgataatga agcattgcct gtacgatcaa tcgactttgt agagtttcgg acgaaggtcc
     1981 gcagaatatt cgcagtatta aataagtgtt cattaatgcg gcaaaaacaa atacaccgca
     2041 tcaatataac atctctgcgg tgtatgaaga ataaccagaa tggttaatag gcgttagacc
     2101 gcgcggaagg aaatctcgcc tggaatgact tcaccctgcc agtagagctg agctgcaacg
     2161 cggtcagcca gctggcggta gatagcggta aattcgctct ccgggcggct gataaccgtt
     2221 ggcgtgcctt tatcgagatc ctcacgtaag gagatgtgta acggcatctg ccccagcagc
     2281 tgtgtatggt atttttcagc cagtttctct gcaccaccgg taccgaaaat cggttcatgg
     2341 tgaccacagt tactgcaaat atgcacactc atgttctcga caataccgag caccggaacc
     2401 tcgactttct cgaacatcac aatgcctttt ttcgcatcga tcaacgcgat gtcctgcggg
     2461 gtggtgacca cgactgcacc agttactgga atgttttgcg ccagcgtcaa ttgaatgtca
     2521 ccggtgcctg gcggcatatc aagcaccaga tagtcgagat ccggccacaa ggtttcctgc
     2581 agcatctgca ttaacgcctt gctcgccatc ggtccacgcc acaccatcgc attgtcgtca
     2641 gtgaccagat aaccaattga attggttgcc aggccatgag acataatcgg tgccatatgg
     2701 gtaccgtccg gcgaagttgg acgctgattt tctgcgccca gcatggtggg aattgatggg
     2761 ccgtagatat cggcgtccag aatgccgact ttcgcccctt ccgccgccag tgccagcgcc
     2821 aggtttaccg ccgtggagga tttacccacg ccgcctttac cggaactgac cgcaatgatg
     2881 ttcttcacgc cattaatacc cggctgattc ttcacgcgtt ttaaggtggc gatattgtgc
     2941 gacagtttcc agtcgatagc tttcgccccg gtgatacgca gcagttcggc gctacattgc
     3001 tcttttaact cttcaaacgc gctatgccag acgaatggca taaccagttc cacatgcaac
     3061 gtgtcgtcca tccaggcgac atggtgcaac gctttcagcg tggtgaggtt atgcttcagg
     3121 gttgggtgct gaaaattggc cagtgtcccg gcgaccattg cgcgcaaggc ttctggtgat
     3181 ttggcctggg attgttcgtt catcccgact ccttttttgt atagataaac catcagctga
     3241 tagtttacct gaagaatata gagaagtact tacttaacat tttcccattt ggtactatct
     3301 aacccctttt cactattaag aagtaatgcc tactatgact caagtcgcga agaaaattct
     3361 ggtgacgtgc gcactgccgt acgctaacgg ctcaatccac ctcggccata tgctggagca
     3421 catccaggct gatgtctggg tccgttacca gcgaatgcgc ggccacgagg tcaacttcat
     3481 ctgcgccgac gatgcccacg gtacaccgat tatgctgaaa gctcagcagc ttggtatcac
     3541 cccggagcag atgattggcg aaatgagtca ggagcatcag actgatttcg caggctttaa
     3601 catcagctat gacaactatc actcgacgca cagcgaagag aaccgccagt tgtcagaact
     3661 tatctactct cgcctgaaag aaaacggttt tattaaaaac cgcaccatct ctcagctgta
     3721 cgatccggaa aaaggcatgt tcctgccgga ccgttttgta aaaggcacct gcccgaaatg
     3781 taaatccccg gatcaatacg gcgataactg cgaagtctgc ggcgcgacct acagcccgac
     3841 tgaattgatc gagccgaaat cggtggtttc tggcgctacg ccggtaatgc gtgattctga
     3901 acacttcttc tttgatctgc cctctttcag cgaaatgttg caggcatgga cccgcagcgg
     3961 tgcgttgcag gagcaggtgg caaataaaat gcaggagtgg tttgaatctg gcctgcaaca
     4021 gtgggatatc tcccgcgacg cgccgtactt cggttttgaa attccgaacg cgccgggtaa
     4081 atatttctac gtctggctag atgcaccgat tggctatatg ggttctttca agaatctgtg
     4141 cgacaagcgc ggcgacagcg taagcttcga tgaatactgg aagaaagact ccaccgccga
     4201 gctgtaccac ttcatcggta aagatattgt ttacttccac agtctgttct ggccagcaat
     4261 gctggaaggc agcaacttcc gcaagccgac caacctgttt gttcatggct atgtgacggt
     4321 gaacggcgcg aagatgtcta agtctcgcgg tacctttatt aaagccagca cctggctgaa
     4381 tcattttgac gccgacagcc tgcgttacta ctacactgcg aaactctctt cgcgcattga
     4441 tgatatcgat ctcaatctgg aagatttcgt tcagcgcgtg aatgccgata tcgtgaacaa
     4501 agtggttaac ctggcctccc gcaacgcggg ctttatcaac aagcgttttg acggcgtgct
     4561 ggcaagcgaa ctggctgacc cgcagttgta cagaaccttc actgatgccg ctgaagtgat
     4621 tggtgaagcg tgggaaagcc gcgaatttgg taaagcagtg cgcgaaatca tggcgctggc
     4681 tgatctggct aaccgctatg tcgatgaaca ggctccgtgg gtggtagcga aacaggaagg
     4741 ccgcgatgcc gacctgcagg caatttgctc aatgggcata aacctgttcc gcgtgctgat
     4801 gacttacctg aagccggtac tgccgaaact gaccgagcgc gcagaagcat tccttaatac
     4861 ggaactgacc tgggatggta tccagcaacc gctgctgggc cataaagtga atccgttcaa
     4921 ggcgctgtat aaccgcatag atatgaagca ggttgaagca ctggtggaag cgtctaaaga
     4981 agaagtgaaa gcagctgccg cgccggtaac tggcccgctg gcagatgatc cgattcagga
     5041 aaccatcacc tttgacgact tcgccaaagt tgacctgcgc gtggcgctga ttgaaaacgc
     5101 agagtttgtt gaaggttctg acaaactgct acgcctgact ctggatctcg gcggcgaaaa
     5161 gcgtaatgtc ttctccggca ttcgttctgc ttacccggat ccgcaggcac tgattggtcg
     5221 tcacaccatt atggtggcta acctggcacc acgtaaaatg cgcttcggta tctccgaagg
     5281 catggtgatg gctgccggtc ctggcgggaa agatattttc ctgctaagcc cggatgctgg
     5341 tgctaaaccg ggtcatcagg tgaaataatc ccccttcaag gcgctgcatc gacagcgcct
     5401 tttctttata aattcctaaa gttgttttct tacgattttg tctctctcta acccgcataa
     5461 atactggtag catctgcatt caactggata aaattacagg gatgcagaat gagacacttt
     5521 atctatcagg acgaaaaatc acataaattc tgggcggttg agcagcaggg aaacgagctg
     5581 catatcaact ggggcaaagt cggcactaac gggcaaagcc agataaaaag ttttgcggat
     5641 gctgcggcag cggcaaaagc ggagcttaag ctgatcgcag agaaaacgaa aaaaggctat
     5701 gtggaaaatg cttcagcaaa cgtgcatatc ccccccatta ccaaagccac tcctgaagtt
     5761 gaaacttccc ctgagagtaa aaaccaacgc ccctggctgg ctgatgatgc ggtcattcgg
     5821 ctaactgacg atattaatcg atttgctttt cctcatcgct ctcgccccag agagatcaat
     5881 tatctgcaca aagatggtca aatatggcag ctcatcgcga ataacaccag ggcatatgat
     5941 cccgccaaca attaccgttc ttatccagaa aactggcagc aggcttttgc tgagttacaa
     6001 atgcgagttc aaggtaatca acagacaggg agtgcacaat ctgatgcagc attgctctgg
     6061 agtttctgga a
//
LOCUS       DADMHC010000209         6055 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.212, whole genome shotgun sequence.
ACCESSION   DADMHC010000209 DADMHC010000000
VERSION     DADMHC010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6055)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6055)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6055
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.212"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(26..394)
                     /locus_tag="JNZ57_003527"
     CDS             complement(26..394)
                     /locus_tag="JNZ57_003527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829608.1"
                     /translation="MNMMRIFYIGLSGVGMMFSSMASGHDAGGLQSPACGVVCDPYIC
                     VNSDGISPELTRKYLGEKAAENLQSLQGYDPSEFTFANGVFCDVKEKLCRDDRYFGVD
                     GKRSGKINQITTKMLFMCRE"
     gene            914..1609
                     /gene="minC"
                     /locus_tag="JNZ57_003528"
     CDS             914..1609
                     /gene="minC"
                     /locus_tag="JNZ57_003528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HAY8829609.1"
                     /translation="MSNTPIELKGSSFTLSVVHLHEAEPKVIHQALEDKIAQAPAFLK
                     HAPVVLNVSALEDPVNWSAMHKAVSATGLRVIGVSGCKDAQLKAEIEKMGLPILTEGK
                     EKAPRPAPAPQAPAQNTTPVTKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIAD
                     GNIHVYGMMRGRALAGASGDRETQIFCTNLMAELVSIAGEYWLSDQIPAEFYGKAARL
                     QLVENALTVQPLN"
     gene            1633..2445
                     /gene="minD"
                     /locus_tag="JNZ57_003529"
     CDS             1633..2445
                     /gene="minD"
                     /locus_tag="JNZ57_003529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020801817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HAY8829610.1"
                     /translation="MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLR
                     NLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGV
                     AKVLDDLKAMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGIL
                     ASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVL
                     RASNQGEPVILDINADAGKAYADTVERLLGEERPFRFIEEEKKGFLKRLFGG"
     gene            2449..2715
                     /gene="minE"
                     /locus_tag="JNZ57_003530"
     CDS             2449..2715
                     /gene="minE"
                     /locus_tag="JNZ57_003530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HAY8829611.1"
                     /translation="MALLDFFLSRKKNTANIAKERLQIIVAERRRSDAEPHYLPQLRK
                     DILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEELK"
     gene            complement(3194..3313)
                     /locus_tag="JNZ57_003531"
     CDS             complement(3194..3313)
                     /locus_tag="JNZ57_003531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001131457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HAY8829612.1"
                     /translation="MPLSYAGYHHFIMMSLVSGEHNTPALSLQDESPGLVPAG"
     gene            complement(3274..3459)
                     /locus_tag="JNZ57_003532"
     CDS             complement(3274..3459)
                     /locus_tag="JNZ57_003532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829613.1"
                     /translation="MSRRYSSATITLVILFCRRPHCRKISVRQYYLKRVIFYPTTLQR
                     TAFKKCLFLMRDIIISS"
     gene            3560..3733
                     /locus_tag="JNZ57_003533"
     CDS             3560..3733
                     /locus_tag="JNZ57_003533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829614.1"
                     /translation="MSYSSFKIILIHVKNIIPIITATLILNYLNNSECSLVKQILIED
                     EIIVCATYLIPDI"
     gene            3795..4079
                     /locus_tag="JNZ57_003534"
     CDS             3795..4079
                     /locus_tag="JNZ57_003534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707069.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper family protein"
                     /protein_id="HAY8829615.1"
                     /translation="MADMNRTTKGALLGAGVGLLTGNGVNGVLKGAAVGAGVGAVTEK
                     GRDGKNARKGAKVGAAVGAVTGVLTGNGLEGAIKGAVIGGTGGAILGKMK"
     gene            4083..4418
                     /locus_tag="JNZ57_003535"
     CDS             4083..4418
                     /locus_tag="JNZ57_003535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmgD family protein"
                     /protein_id="HAY8829616.1"
                     /translation="MMMKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEM
                     AKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAID
                     DTMRAIGKK"
     gene            complement(4475..6055)
                     /locus_tag="JNZ57_003536"
                     /pseudo
     CDS             complement(4475..6055)
                     /locus_tag="JNZ57_003536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707067.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
BASE COUNT         1665 a         1393 c         1382 g         1615 t
ORIGIN      
        1 aatagaacat aatgtaaaca aggcatcact cacgacacat aaataacatc tttgtggtga
       61 tttgattgat ttttccactc cgcttaccat ccacaccaaa ataacgatca tcacgacata
      121 atttttcttt aacatcgcaa aatacaccgt tagcgaatgt aaattcgctg ggatcgtagc
      181 cttgtaatga ttgtaagttt tcagcggctt tttcgccgag atatttcctt gttaactctg
      241 gggaaatgcc atctgagttc acacaaatat acgggtcgca aacaacgccg cacgccggag
      301 attgaagtcc gccagcgtca tgtccagacg ccattgatga gaacatcatc cccacacctg
      361 acaatccgat ataaaaaata cgcatcatat tcatagcaca tcctgataat ccaaccgtac
      421 aacacttatg ctcatttcat catcaatccg taatcaaaac cgctgacctg gacgagttac
      481 gatgacctga cagaagtatc agacgtcttc tgcggtttct atgatagagc aattctgtgg
      541 cggatattaa gataacgggt atctgttctt taatgatgct gcaaaaaatg gaaagttaag
      601 aaagcctggc gtggtgaaaa aatacacttg cctcaatact ggatatttaa acaggtctgg
      661 agatgctgtc acgattaggg tgcggaaaaa ggaagcgtaa ataagaacaa tcaaaagtac
      721 gacggcaatg ggttgattga caagggtatt ttttaagcta tgaatcagcg ccatttatca
      781 cagaatagac ttttactctg aataaatggg agggtgactt gcctcaatat aatccagact
      841 ataacatgcc ttatagtctt cggaacatca tcgcgcgctg gcgatgatta atagctaatt
      901 gagtaaggcc aggatgtcaa acactccaat cgagcttaaa ggcagtagct tcactttatc
      961 tgtggttcat ctgcatgagg cagaacctaa ggttatccat caggcgctgg aagacaaaat
     1021 cgctcaggcc cccgcatttt taaaacatgc ccccgttgta ctcaacgtca gtgcactgga
     1081 agacccggta aactggtcag cgatgcataa ggcggtgtcg gcaaccggtt tgcgggttat
     1141 tggcgtaagt ggctgcaaag atgcgcaact taaagccgaa attgaaaaga tggggctgcc
     1201 tatcctgacg gaaggaaagg aaaaagcgcc gcgtccagct cccgcaccac aggctccagc
     1261 gcaaaataca acgccggtca caaaaacgcg tttaatagat accccggtgc gttccggtca
     1321 gcgtatttat gctccacaat gtgatctgat tgttacaagc cacgttagcg ctggggccga
     1381 attgattgcc gatgggaaca ttcatgtcta tggcatgatg cgtggtcgtg cgcttgcagg
     1441 ggcaagtggt gaccgggaaa cgcaaatatt ttgtacgaac ctgatggcgg aactggtgtc
     1501 catcgcaggt gaatactggc tgagtgatca aatcccagca gaattttatg gcaaagcggc
     1561 gcgactgcag ttagtcgaaa acgctttgac cgttcaaccg ttaaattgat ccctttttaa
     1621 caaggaattt ctatggcacg cattattgtt gttacttcgg gcaaaggggg tgttggtaag
     1681 acaacctcca gcgcggccat cgccactggt ttggcccaga agggaaagaa aactgtcgtg
     1741 atagattttg atatcggcct gcgtaatctc gacctgatta tgggttgtga acgccgggtc
     1801 gtttacgatt tcgtcaacgt cattcagggc gatgcaacgc taaatcaggc gttaattaaa
     1861 gataagcgta ctgaaaatct ctatattctt ccggcatcgc aaacacgcga taaagatgcc
     1921 ctcacccgtg aaggggtcgc caaagttctt gatgatctga aagcgatgga ttttgaattt
     1981 atcgtttgtg actccccggc agggattgaa accggtgcgt taatggcact ctattttgca
     2041 gacgaagcca ttattaccac caacccggaa gtctcctcag tacgcgactc tgaccgtatt
     2101 ttaggcattc tggcgtcgaa atcacgccgc gcagaaaatg gcgaagagcc tattaaagag
     2161 cacctgctgt taacgcgcta taacccaggc cgcgtaagca gaggtgacat gctgagcatg
     2221 gaagatgtgc tggagatcct gcgcatcaaa ctcgtcggcg tgatcccaga ggatcaatca
     2281 gtattgcgcg cctctaacca gggtgaaccg gtcattctcg acattaacgc cgatgcgggt
     2341 aaagcctacg cagataccgt agaacgtctg ttgggagaag aacgtccttt ccgcttcatt
     2401 gaagaagaga agaaaggctt cctcaaacgc ttgttcggag gataagttat ggcattactc
     2461 gatttctttc tctcgcggaa gaaaaacaca gccaacattg caaaagaacg gctgcagatt
     2521 attgttgctg aacgccgtcg cagcgatgca gaaccgcatt atctgccgca gttgcgtaaa
     2581 gatattcttg aggtcatttg taaatacgta caaattgatc ctgagatggt aaccgtacag
     2641 cttgagcaaa aagatggcga tatttctatt cttgagctga acgtgacctt accggaagca
     2701 gaagagctga aataagcccg ctgtaaaaac gcatttatct tcaaggcaga gtcatttctg
     2761 ccttgagttt ttcatccctc tcatccacgt tgtggtaaag cggcgagtat tcttgctgat
     2821 actcctcatt gctatttcca cctccccctt tacaccttaa ggctgttccc acgcacagaa
     2881 caaaatgttt atgcctggtt gagtaaataa cctcattgtt agtgtgtata cactggggga
     2941 tgataacccc gcaatttcat tattcattgt tctcccatag gatgaggttt cccgccgtaa
     3001 ctggcgggct ttttttgccc cagaattttc ccttttagcc ccctgtaaac gaaaactgcg
     3061 ccgaagcgca gtttaatcgt tgatggtcag aacgaccagt tcacgatata tactgcgggt
     3121 atcgactgat ttcgattcca tgccattgga taaatgatag tagcgtctaa gtgacctaag
     3181 ctctgctgca acatcagccc gcaggcacca gaccagggga ttcatcctga agagacagcg
     3241 caggtgtatt gtgttcacca ctcaccaaag acatcatgat gaaatgatga tatcccgcat
     3301 aagaaagagg cattttttaa acgcagtgcg ctgaagtgta gttggataaa aaatcactct
     3361 tttcagataa tactgtcgta cgcttatctt tcgacaatga ggccgtcggc aaaataaaat
     3421 gactaatgta atcgttgctg atgaatatct tctgctcaca taaaaatcac acaataatat
     3481 tgataaatca gattatctta cctttacaac attgcgttaa cagtcaatga cacttcttga
     3541 ataaaaatat tgccaatcaa tgagttattc ctcatttaag attattctca ttcacgtaaa
     3601 aaacataatt cctatcatca cagccacgct cattttgaat tatctgaata atagcgagtg
     3661 ttctttagtt aagcagatct taattgaaga cgaaattatt gtgtgtgcaa cttacttaat
     3721 accggacatc taagttgaag aaaaaaatac ttgccttcgg gcttatctca gcattgttct
     3781 gctccacgcc agcgatggcg gatatgaatc gcaccacgaa aggtgcattg ctaggcgcag
     3841 gcgttggttt acttactggc aatggtgtta atggcgtact gaaaggtgca gctgttggcg
     3901 ctggtgttgg tgcagtaaca gaaaaaggcc gcgacggtaa aaatgcgcgt aaaggtgcaa
     3961 aagtaggtgc cgccgttggt gctgtcactg gcgttctgac cggtaatggc ctcgaagggg
     4021 cgattaaagg tgccgtgatt ggcggtacgg gtggtgcaat tctgggtaaa atgaaataag
     4081 gaatgatgat gaaaaaattt gctttactgg cgggcctgtt tgttttcgca ccaatgacct
     4141 gggcgcagga ctacaatatt aaaaacggtt taccgtcaga aacctatatt acttgcgcag
     4201 aagccaacga aatggcaaaa actgacagcg cacaggttgc agaaattgtt gcggtaatgg
     4261 gtaatgccag cgttgccagc cgtgatttaa aaattgagca atctccggaa ctgagcgcca
     4321 aagtggtaga aaaactgaat caggtttgcg ctaaagaccc gcaaatgctg ttgatcacgg
     4381 caattgatga caccatgcgt gctatcggca aaaaataata tttcatatgt accgcgtcga
     4441 tgaatacgac gcggtttttt agctaacggc gggatcagaa cttatatttc aggcccacca
     4501 tcactgcggt gtcattgtag ccattatcac ccagctgcac gcccacattc ccccagacgc
     4561 tggccgctgg attcaggttg ccatttacgc caagtttaat ttcccccaaa ttactcgccc
     4621 catcttgttc gactttcaca ccgttcattg agacagcaaa atctttactg ttatggatcc
     4681 agttcatttc aacaaaaggt tcaaagtcgt caccgtgcgg accgctgttt ttctcctgag
     4741 tacgaataaa ggtgcggaaa ccaagtcggg tctggatgtt gttatttgcg tcattctcaa
     4801 tacgtgagcc attggcttcg gtgtgcgcat tatgatcgac gcccatccag atagcctgtg
     4861 cctgtggctg gaatatccac gtgtatttcg ccgcttccag accaaaggat ttattcaggg
     4921 caaagccgta acccgcttcc agcgagacgg ttgcgccttt cgcactatag gattcatagg
     4981 ctaattcatc ccctttcacc gagtttttaa accagctata ttgcgcccag gcgtcaatgt
     5041 atgcgccttt tttactgatg tcatcggcaa accaagtggc atacagccct gcgcaatagc
     5101 ctctgacact ccctttcgaa cgataatccg acacgctgga atgagttgag ttgtagtcgc
     5161 gggcataacc agccatcact cccaaacgct aactgtcact gtcggtaaaa ccaccggtta
     5221 acagatcggc ccctaactgc gagacgtagc gatgcgaggt cgttctcaac tgtccgttgc
     5281 tgtcacgcca ggcattatgc ccgccaattt gacgtagcca aagtcggctt gaacgctcct
     5341 gttcagttac aggatcgatg tagcgcattt cacccgcacg gtcgttcaga cgcataacaa
     5401 aaagagtgtt agcggctgcc aggttggcga cgtaacttcc agcttcgggg cgcaggacgg
     5461 gggtaggcgt ttctgttggt tctgaatttc cctctgagct gttatcctcc taattcactg
     5521 actgataact tgtcaaatac cagtttttgc cttgttgttt tagttgatat tcgaaagctc
     5581 cagctgcaat ccttgcatca ccttgtctga aggcttctgc tggagattca tcgccattca
     5641 cagttatgag ttcgatcccg tttagcgtgg ccgcgccgct tcctccagca tttttcacat
     5701 agacggtagt tgaacccgaa gtattaccct caacaataag tctgtccgta gccgatttat
     5761 catcacctaa tacggtgcgg atattaagct gaccattatt accgacataa ttacctttta
     5821 cggttaatgt ttttccttgg gtaaatgttt gaccatcatc atacgaaaga ttgataatac
     5881 tgtctgaatt agtcagatgg gtaacaatgg agtcatcttt catattccag attgtatttt
     5941 ctgaaagctt cagcgtggtt gtgccgctaa cgagtttagt cgctccattt agaatagagt
     6001 cggacgaaat tatgtttaag tcacctccag tattattaac cagaacatta ttacc
//
LOCUS       DADMHC010000210         6030 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.213, whole genome shotgun sequence.
ACCESSION   DADMHC010000210 DADMHC010000000
VERSION     DADMHC010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6030)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6030)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6030
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.213"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(1..243)
                     /locus_tag="JNZ57_003537"
                     /pseudo
     CDS             complement(1..243)
                     /locus_tag="JNZ57_003537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000080172.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            195..1232
                     /locus_tag="JNZ57_003538"
     CDS             195..1232
                     /locus_tag="JNZ57_003538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001363149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
                     /protein_id="HAY8829617.1"
                     /translation="MHRGFCVAHEPSILLPSVGAQLSNPDNITDNADRISDEWKAFDR
                     AIESNHGVPEAAARLKEHLRDFRNTHAAAQLGVSAVAALPGDRLSAALMVKSHGTVSV
                     DGKVSDADLTYLEEVANSTGQEVDKSRLTSQAFARAALITDVGIALATELETAGQKWS
                     LGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDNWTLGLV
                     AQNLIPRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTSDSNR
                     QFAAIGAEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTDNT
                     YGAVAQFQFTF"
     gene            1592..5449
                     /gene="sigA"
                     /locus_tag="JNZ57_003539"
     CDS             1592..5449
                     /gene="sigA"
                     /locus_tag="JNZ57_003539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease autotransporter toxin SigA"
                     /protein_id="HAY8829618.1"
                     /translation="MNKIYSLKYSHITGGLVAVSELTRKVSVGTSRKKVILGIILSSI
                     YGSYGETAFAAMLDINNIWTRDYLDLAQNRGEFRPGATNVQLMMKDGKIFHFPELPVP
                     DFSAVSNKGATTSIGGAYSVTATHNGTQHHAIKTQSWDQTAYKASNRVSSGDFSVHRL
                     NKFVVETTGVTESADFSLSPEDAMKRYGVNYNGKEQIIGFRAGAGTTSTILNGKQYLF
                     GQNYNPDLLSASLFNLDWKNKSYIYTNRTPFKNSPIFGDSGSGSYLYDKEQQKWVFHG
                     VTSTVGFISSTNIAWTNYSLFNNILVNNLKKNFTNTMQLDGKKQELSSIIKDKDLSVS
                     GGGELTLKQDTDLGIGGLIFDKNQTYKVYGKDKSYKGAGIDIDNNTTVEWNVKGVAGD
                     NLHKIGSGTLDVKIAQGNNLKIGNGTVILSAEKAFNKIYMAGGKGTVKINAKDALSES
                     GNGEIYFTRNGGTLDLNGYDQSFQKIAATDAGTTVTNSNVKQSTLSLTNTDAYMYHGN
                     VSGNISINHIINTTQQHNNNANLIFDGSVDIKNDISVRNAQLTLQGHATEHAIFKEGN
                     NNCPIPFLCQKDYSAAIKDQESTVNKRYNTEYKSNNQIASFSQPDWESRKFNFRKLNL
                     ENATLSIGRDANVKGHIEAKNSQIVLGNKTAYIDMFSGRNITGEGFGFRQQLRSGDSA
                     GESSFNGSLSAQNSKITVGDKSTVTMTGALSLINTDLIINKGATVTAQGKMYVDKAIE
                     LAGTLTLTGTPTENNKYSPAIYMSDGYNMTEDGATLKAQNYAWVNGNIKSDKKASILF
                     GVDQYKEDNLDKTTHTPLATGLLGGFDTSYTGGIDAPAASASMYNTLWRVNGQSALQS
                     LKTRDSLLLFSNIENSGFHTVTVNTLDATNTAVIMRADLSQSVNQSDKLIVKNQLTGR
                     NNSLSVDIQKVGNNNSGLNVDLITAPKGSNKEIFKASTQAIGFSNISPVISTKEDQEH
                     TTWTLTGYKVAENTASSSAAKSYMSGNYKAFLTEVNNLNKRMGDLRDTNGEAGAWARI
                     MSGAGSASGGYSDNYTHVQIGVDKKHELDGLDLFTGLTMTYTDSHASSNAFSGKTKSV
                     GAGLYASAIFDSGAYIDLISKYVHHDNEYSATFAGLGTKDYSSHSLYVGAEAGYRYHV
                     TEDSWIEPQAELVYGAVSGKRFDWQDRGMSVTMKDKDFNPLIGRTGVDVGKSFSGKDW
                     KVTARAGLGYQFDLFANGETVLRDASGEKRIKGEKDGRILMNVGLNAEIRDNLRFGLE
                     FEKSAFGKYNVDNAINANFRYSF"
BASE COUNT         1835 a         1351 c         1348 g         1496 t
ORIGIN      
        1 acgacatttc ttcgataacg tgtgttcttt ctcctgcatc agcttataca gggaagtcag
       61 gagcggtcta ctctgcattt gcctgaccgc caggcgttca gacaccggta acccgcgtat
      121 atcgtgctct atggcgtaca gttcaccgat tagtttcaga gcttcttccg ccgtcgcgct
      181 tttagtactg atatatacat cgtggatttt gcgtcgcgca tgagcccagc atcctgcttc
      241 cgtccgtcgg cgcgcagctc tccaatccgg ataatatcac cgacaacgcc gaccggatca
      301 gtgatgagtg gaaggccttc gaccgcgcca tcgaaagtaa ccacggtgtt cctgaggctg
      361 ccgcacgcct gaaagaacac ctccgggact tccgtaacac acatgccgcc gcacagctgg
      421 gcgtttctgc tgtggcggcc cttcccggtg atcgcctctc tgccgcactg atggttaaat
      481 cacacggcac cgtcagtgtc gacggtaaag tctctgatgc tgacctcact tacctggaag
      541 aggtggcaaa cagcaccggg caggaggtgg acaaaagccg cctgacatca caggcctttg
      601 cccgcgcggc actgatcact gatgtgggta ttgctctggc tacggaactg gaaacggccg
      661 ggcagaaatg gtctctgggc ttccccccca aattccagcg cgtcgacctg ttcaactaca
      721 acgtgctggt cagaaattat gacagcagcg ccttcaaagg cgaccgctac cacaacacga
      781 aaaatggcat caacgccgac atcggtgcca gtacggacct ggatgacaac tggacgctgg
      841 gactggtcgc acagaacctg atcccccgta gtattgagac aaaagaagtg aacggtatca
      901 cggaaacctt caggatccgc ccgcaggtga cggccggtgt ctcctggcac aacgcgatgt
      961 tcaccaccgc atttgatgtg gatctgaccc cggccagcgg tttcacctcc gacagcaacc
     1021 gtcagtttgc cgccattggc gcagaattta atgcctggaa atgggcacag ctgcgcgccg
     1081 gttaccgtca gaatctggcc ggtaacgacg gcagtgcatt cacggccggg gtggggatct
     1141 caccgtttga tgtggttcac cttgatgttg caggcctgat cggcacggac aacacttacg
     1201 gtgcggtcgc acagttccag ttcaccttct gagttccacc tgcaaaacag catgcacatt
     1261 atcgctgcat gttgtttcca tcatcaaaag tctgtcggac atcgacagac ttaactcccc
     1321 cggataatac agaaaacctg taaaggattg accggaaaca acaaagatca aattttgatc
     1381 gcaaagttca aaatacaaac accaagtggt caatatctga ccaatcaatc acttgtgctt
     1441 atcttttttt tcattttgtt acatctgtca tacaaatata actgacagtg gttatcatta
     1501 taccttatca gttacgtacc atgactgata gttccccgtt gtaattaaat gctatcccat
     1561 aaccacaact cagaaatatc ggagttcacg tatgaataaa atttattcac tgaaatatag
     1621 tcatattaca ggtggattag ttgctgtttc tgaactgacc cggaaagtta gtgtcggtac
     1681 atcaagaaag aaagttatcc tcggtattat tttatcctca atatatggaa gttatggcga
     1741 aacagcattt gcagcaatgc tggatataaa taatatatgg acccgcgatt atcttgacct
     1801 tgctcaaaac agaggagagt tcagaccggg tgcaacaaat gttcaattaa tgatgaaaga
     1861 tggaaagata tttcattttc cagaactacc tgtacctgat ttttctgctg tttccaacaa
     1921 aggtgcaaca acatcaattg gaggtgcgta cagtgttact gcgactcata acggtacaca
     1981 gcatcatgca ataaaaacac agtcatggga tcagacagca tataaagcaa gtaacagagt
     2041 atcatctggc gacttttcgg ttcatcgtct gaataaattc gtcgtggaaa caacaggggt
     2101 tacggagagt gccgacttct cactttctcc cgaagatgcg atgaaaagat atggcgtaaa
     2161 ctacaacggt aaggaacaaa taattggctt cagagcaggt gccggaacaa cctcaacgat
     2221 attaaacggc aaacaatatc tgtttggaca aaactataat cccgacttgt taagcgcaag
     2281 tctttttaat ctggactgga aaaacaagag ttacatttat accaacagaa ccccttttaa
     2341 aaactcacca atttttggcg atagtggttc tggttcttat ctatatgata aagaacaaca
     2401 aaaatgggtt ttccatggtg ttaccagtac agttggtttt atcagtagta ccaatatagc
     2461 ctggacaaac tactcgttat ttaataatat tctggtaaac aatttaaaaa agaatttcac
     2521 aaacactatg cagctggatg gtaaaaaaca agagttatca tcgattataa aagataagga
     2581 cctgtctgtc tcaggaggag gggaattaac gctcaagcag gataccgatc ttggcattgg
     2641 cgggcttata ttcgataaga accagacata taaagtgtac ggaaaagata agtcttataa
     2701 aggtgccggg atagatattg ataataatac caccgttgaa tggaatgtta agggcgttgc
     2761 cggagataat ctgcataaaa taggtagtgg tactctggat gtaaaaatag cacagggaaa
     2821 taaccttaaa ataggtaatg ggactgtcat ccttagtgct gaaaaagcct tcaataaaat
     2881 ttacatggcc ggaggtaaag gtacggtaaa aataaatgcc aaagacgctt taagcgaaag
     2941 cggtaatggc gaaatctatt ttaccagaaa tggcggaaca ctggatctaa acggctatga
     3001 ccagtcattt cagaaaatcg cagcaacaga tgcgggaaca accgtaacga actcaaacgt
     3061 gaagcaatca acattatcac ttactaatac tgatgcatat atgtaccatg ggaatgtatc
     3121 aggtaatata agcataaatc atattatcaa tactacccag caacataaca ataatgccaa
     3181 tctgatcttt gatggctcag tcgatatcaa aaacgatatc tctgtccgga atgcacagtt
     3241 aacattacaa ggacatgcga cagaacatgc catatttaaa gaaggcaata acaactgtcc
     3301 aattcctttt ttatgtcaaa aagattattc tgctgccata aaggaccagg aaagcactgt
     3361 aaataaacgt tacaatacgg aatataagtc caacaatcag atagcctctt tttcccagcc
     3421 cgactgggaa agtcgtaaat ttaatttccg gaaattaaat ttagaaaacg caaccctgag
     3481 tataggccgg gatgctaatg taaaaggaca catagaggct aaaaactctc aaattgttct
     3541 gggaaataaa actgcataca ttgacatgtt ctcaggaaga aacattactg gcgaaggttt
     3601 tggattcaga caacagcttc gctccgggga ttcagcaggc gaaagtagtt tcaacggcag
     3661 tctgagtgct caaaacagca aaataactgt tggtgataaa tcaactgtta ctatgactgg
     3721 tgcattatcc ttaattaata cagacctgat tatcaacaaa ggagctactg ttaccgccca
     3781 gggaaaaatg tatgtagata aagctattga actggccgga accctgacat taacaggcac
     3841 ccctacagaa aataataaat acagcccggc aatctatatg tcagatggat ataatatgac
     3901 agaagatggt gccacgttaa aggctcaaaa ttatgcctgg gtcaatggta atataaaatc
     3961 agacaaaaaa gcatctattc tgtttggtgt tgaccagtat aaagaagata acctggacaa
     4021 aaccacacac acaccgctgg ctacaggttt gctgggtggc tttgatactt cttataccgg
     4081 aggtattgat gctcctgctg cctcagccag catgtataac accttatgga gagtaaacgg
     4141 acagtcagcc ctgcaatcat taaaaacccg cgacagtctt ttgttgttta gtaacataga
     4201 gaattcgggt ttccatactg tgactgtaaa cacactggat gccactaata ctgctgtgat
     4261 tatgcgggct gatctgagcc agtctgtaaa tcaatcggat aaactcattg ttaaaaatca
     4321 gttaaccgga cgcaataaca gtctgtcggt cgatatacag aaagtgggaa ataataactc
     4381 aggattaaac gttgacctga taacagcccc aaaaggaagc aataaagaga tatttaaagc
     4441 cagtactcag gccataggtt tcagcaacat atctcctgtg atcagcacga aagaggatca
     4501 ggaacatacc acgtggaccc tgaccggata taaggtggct gaaaatacag catcttccag
     4561 tgcagcaaaa tcgtatatgt ccggtaatta caaagccttc ctgacagaag tcaacaacct
     4621 gaataaacga atgggggatc tgcgtgacac caatggcgag gccggtgcat gggcccgcat
     4681 catgagcgga gcaggttcag cttctggtgg atacagtgac aactacaccc atgtgcagat
     4741 tggtgtggat aaaaaacatg agctggatgg acttgacctt ttcactggtc tgactatgac
     4801 gtataccgac agtcatgcca gcagtaatgc attcagtggc aagacgaagt ccgtcggggc
     4861 aggtctgtat gcttccgcta tatttgactc tggtgcctat atcgacctga ttagtaagta
     4921 tgttcaccat gataatgagt actcggcgac ctttgctggg ctcggaacaa aagactacag
     4981 ttctcattcc ttgtatgtgg gtgctgaagc aggctaccgc tatcatgtaa cagaagactc
     5041 ctggattgag ccgcaggcag aactggttta tggggccgta tcaggtaaac ggttcgactg
     5101 gcaggatcgc ggaatgagcg tgaccatgaa ggataaggac tttaatccgc tgattgggcg
     5161 taccggtgtt gatgtgggta aatccttctc cggtaaggac tggaaagtca cagcccgcgc
     5221 cggccttggc taccagtttg acctgtttgc caacggtgaa accgtactgc gtgatgcgtc
     5281 cggtgagaaa cgtatcaaag gtgaaaaaga cggtcgtatt ctcatgaatg ttggtctcaa
     5341 cgccgaaatt cgcgataatc ttcgcttcgg tcttgagttt gagaaatcgg catttggtaa
     5401 atacaacgtg gataacgcga tcaacgccaa cttccgttac tctttctgat aacagcccgg
     5461 gccgcgtttg cggcccttct tctaccggag agaatatgta ttaccctgtg acagactata
     5521 tcgctcttgc tctcattatt agctttcttt ttctgacatt atttatctgc ctgttatgcc
     5581 ttaaacatga gcgaataaaa aaaagaaact atcaggcaaa aaaatgcaca tattctggag
     5641 catggctgga atgcaactga gttctcatgg ttccgatacg gacagtataa cgaaacgggt
     5701 atttacatct cgatcgagaa gaccattatc attacaatca ccgtttctgg tgggtgcttt
     5761 aaaaaagaat acagcattgt ctcccacatg ctggtcactg acaccataac agaggccacc
     5821 ctgtacgaaa acgggctgta tacgcgccac atcagactca gtcgcccagt atctgacagc
     5881 aaatacccct tgccacccgg atctcagctc attaaaaata tgaccttacg actgcgcctg
     5941 caggatcagc aggaagaaac atccgtgaca ttatttcagg gaaaaatgag taccgacgga
     6001 aataactatt acatcatcaa aggtaaagta
//
LOCUS       DADMHC010000211         5983 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.214, whole genome shotgun sequence.
ACCESSION   DADMHC010000211 DADMHC010000000
VERSION     DADMHC010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5983)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5983)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5983
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.214"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(1..393)
                     /locus_tag="JNZ57_003540"
                     /pseudo
     CDS             complement(1..393)
                     /locus_tag="JNZ57_003540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_151035092.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus outer membrane usher protein"
     gene            complement(579..3887)
                     /gene="icsA"
                     /locus_tag="JNZ57_003541"
                     /gene_synonym="virG"
     CDS             complement(579..3887)
                     /gene="icsA"
                     /locus_tag="JNZ57_003541"
                     /gene_synonym="virG"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane autotransporter IcsA"
                     /protein_id="HAY8829619.1"
                     /translation="MNQIHKFFCNMTQCSQGGAGELPTVKEKTCKLSFSPFVVGASLL
                     LGGPIAFAIPLSGTQELHFSEDNYEKLLTPVDGLSPLGAGEDGMDAWYITSSNPSHAS
                     RTKLRINSDIMISAGHGGAGDNNDGNSCGGNGGDSITGSDLSIINQGMILGGSGGSGA
                     DHNGDGGEAVTGDNLFIINGEIISGGHGGDSYSDSDGGNGGDAVTGVNLPIINKGTIS
                     GGNGGNNYGEGDGGNGGDAITGSSLSVINKGTFAGGNGGAAYGYGYDGYGGNAITGDN
                     LSIINNGAILGGNGGHWGDAINGSNMTIANSGYIISGKEDDGTQNVAGNAIHITGGNN
                     SLILHEGSVITGDVQVNNSSILKIINNDYTGTTPTIEGDLCAGDCTTVSLSGNKFTVS
                     GDVSFGENSSLNLAGISSLEASGNMSFGNNVKVEAIINNWAQKDYKLLSADKGITGFS
                     VSNISIINPLLTTGAIDYTKSYISDQNKLIYGLSWNDTDGDSHGEFNLKENAELTVST
                     ILADNLSHHNINSWDGKSLTKSGEGTLILAEKNTYSGLTNINAGILKMGTVEAMTRTA
                     GVIVNKGATLNFSGMNQTVNTLLNSGTVLINNINAPFLPDPVIVTGNMTLEKNGHVIL
                     NNSSSNVGQTYVQKGNWHGKGGILSLGAVLGNDNSKTDRLEITGHASGITYVAVTNEG
                     GSGDKTLEGVQIISTDSSDKNAFIQKGRIVAGSYDYRLKQGTVSGLNTNKWYLTSQMD
                     NQESKQMSNQESTQMSSRRASSQLVSSLNLGEGSIHTWRPEAGSYIANLIAMNTMFSP
                     SLYDRHGSTIVDPTTGQLSETTMWIRTVGGHNEHNLADRQLKTTANRMVYQIGGDILK
                     TNFTDHDGLHVGIMGAYGYQDSKTHNKYTSYSSRGTVSGYTAGLYSSWFQDEKERTGL
                     YMDAWLQYGWFNNTVKGDGVTGEKYSSKGITGALEAGYIYPTIRWTTHNNIDNALYLN
                     PQVQITRHGVKANDYIEHNGTMVTSSGVNNIQAKLGLRTSLISQSCIDKETLRKFEPF
                     LEVNWKWSSKQYGVIMNGMSNHQIGNRNVIELKTGVGGRLADNLSIWGNVSQQLGNNS
                     YRDTQGILGVKYTF"
     gene            4416..5618
                     /gene="virA"
                     /locus_tag="JNZ57_003542"
     CDS             4416..5618
                     /gene="virA"
                     /locus_tag="JNZ57_003542"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858314.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-tubulin-specific protease"
                     /protein_id="HAY8829620.1"
                     /translation="MQTSNITNHERNDSSWMSTVKSTTEVSWNKLSFCDVLLKIITFG
                     IYSPHETLAEKYSEKKLMDSFSPSLSQDKMDGEFAHANIDGISIRLCLNKGICSVFYL
                     DGDKIQSTQLSSKEYNNLLSSLPPKQFNLGKVHTITAPVSGNFKTHKPAPEVIETAIN
                     CCTSIIPNDDYFPVKDTDFNSVWHDIYRDIRASDSNSTKIYFNNIEIPLKLIADLINE
                     LGINEFIDSKKELQMLSYNQVNKIINSNFPQQDLCFQTEKLLFTSLFQDPAFISALTS
                     AFWQSLHITSSSVEHIYAQIMSENIENRLNFMPEQRVINNCGHIIKINAVVPKNDTAI
                     SASGGRAYEVSSSILPSHITCNGVGINKIETSYLVHAGTLPSSEGLRNAIPPESRQVS
                     FAIISPDV"
     gene            5797..>5983
                     /locus_tag="JNZ57_003543"
     CDS             5797..>5983
                     /locus_tag="JNZ57_003543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8829621.1"
                     /translation="MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCIL
                     ETLRVWVRQHERDTGGGE"
BASE COUNT         1840 a         1351 c         1020 g         1772 t
ORIGIN      
        1 tcaggctgta cgcttcccca tgtgatttgc ctcgccactt caccgggctc aggaccccgt
       61 aggatcttca ccgaaaaaaa tgcatcacca gttgctttat tatttgtttt aggtagacct
      121 gttactaatt tatacctact ctgaccaagt ctggataaga aaggcacacc tgcacatttc
      181 tacttggaaa tgttttcttt taccattttg ctcaaaaatt tcaacatcca atattcctcg
      241 tacagaacta ctcaagtcct gaatagaaaa agttccagct ggtacagtag agtcatatat
      301 tactcgacct tgttgagata caacaacacg tgcattagtt tctgcaatac cagtaatctg
      361 aggcgcataa ccacgaatat ttggcggtag cattcgttca tcgctttcta atgcaattcc
      421 tgtgtaacgc caagcaacag cgcattctgg cgcatgatct ggtaaacacg tttggcattg
      481 atcgcaggca taccatcatg tgcacaaaaa cccaccgagc ttttacacgg tgggtcccag
      541 agaaatgcag gacatcaaca cgccctgcat ttttattatc agaaggtata tttcacaccc
      601 aaaatacctt gggtgtctct gtaactgtta ttacccaatt gctgagatac gtttccccag
      661 atgcttaggt tatctgcaag acgccccccc acaccagttt tgagttcaat cacattacgg
      721 ttgcctatct ggtgatttga catgccattc ataattacac catattgctt tgagctccat
      781 ttccaattca cttccaaaaa tggttcgaac ttacgaagag tctccttatc gatacaactc
      841 tgactaatta aggatgtacg caatcccaat tttgcttgaa tattattgac cccagaggat
      901 gtgaccatag tgccattgtg ttcaatatag tcgtttgctt ttaccccatg cctagttatc
      961 tggacttgtg gattgagata caatgcgttg tcaatattat tatgagtagt ccagcgtata
     1021 gttgggtaga tatagccagc ttccaaagct cctgttattc ctttgctgga atatttctca
     1081 ccagttaccc catctccttt gactgtatta ttaaaccaac cgtactgcaa ccaagcatcc
     1141 atatatagac ctgttcgttc tttttcatcc tgaaaccaag aactgtacaa accggcagta
     1201 taaccgctca cagttcctcg tgaactataa ctagtatact tattatgagt tttgctatcc
     1261 tgatatccat aagctcccat aatacccaca tgcaagccat catgatcagt gaagtttgtc
     1321 ttcaaaatat ctccaccaat ctgataaacc atcctgttag ctgtggtttt taattgtcta
     1381 tcagctaaat tatgctcatt atgtccacca acagtacgaa tccacatggt ggtttcgctg
     1441 agctgacctg tagtaggatc aacaatagtg ctaccgtgtc ggtcatagag agaaggacta
     1501 aacatcgtgt tcattgctat caggttagca atataactgc cagcttcagg gcgccatgtg
     1561 tgaatactac cttcacccaa attaagtgaa gatacaagct gtgaactagc tcggcgacta
     1621 ctcatttgag tagactcttg attgctcatc tgttttgatt cttgattatc catctgacta
     1681 gttagatacc acttattggt attcagtcca gatacagtgc cctgtttcag gcgatagtca
     1741 taactaccag caacaatacg gcctttctga ataaaagcat tcttatcaga agaatctgtc
     1801 gaaataattt gaacaccttc aagagtttta tctccagagc ctccctcatt tgtcactgca
     1861 acataggtaa taccagacgc atggcctgta atttccagcc ggtcagtttt actgttgtca
     1921 ttgccgagaa ccgcgcccaa agataatatt ccgccctttc catgccaatt acctttctga
     1981 acataggtct gaccgacatt tgacgaacta ttattgagaa taacatgacc gtttttctcc
     2041 agagtcatgt tacctgtgac aatgacgggg tcaggcaaaa aaggggcatt aatattattg
     2101 attagcacag tcccactatt taataaagtg ttaacagttt ggttcatgcc tgaaaaattc
     2161 aaggtagcac ctttattaac aataacacca gcggtacgtg tcatagcttc aactgtcccc
     2221 atttttagaa tgcctgcatt gatgttggtg agaccagagt aggtattttt ttccgccaaa
     2281 atgagagttc cctcccctga ttttgttagg gattttccgt cccagctatt tatattatga
     2341 tggctgagat tatctgccag aatagtacta acagtaagtt cagcgttttc tttcagattg
     2401 aactctccat gactgtcgcc atctgtatca ttccagctca aaccgtagat caatttattc
     2461 tggtcactga tatagctttt tgtatagtca atagcaccag tagtgagtaa cggattgatg
     2521 atagatatat tagaaacact gaaacctgtt atccctttat ctgcacttag cagtttatag
     2581 tccttctgcg cccagttatt tataatagct tccactttta cattgttgcc aaatgacata
     2641 tttccagaag cttccagact actgattcca gctaaattta aagaactgtt ctcaccaaaa
     2701 gaaacgtcac ctgaaacagt gaatttgtta cctgatagtg aaacagttgt acaatcacca
     2761 gcacataaat caccttcaat agttggagtg gtcccagtgt aatcattgtt gataattttc
     2821 agaatggatg aattgttaac ctgtacatca ccagtaatga cagaaccttc atggagtatt
     2881 aatgaattgt ttccaccagt gatgtggata gcattacctg ctacattttg tgttccatca
     2941 tcttctttac ctgaaattat atatccgcta ttagcaatgg tcatattgct accatttata
     3001 gcatcccccc aatgtccacc attaccgcct aaaatagctc cattgttgat tatagacagg
     3061 ttatctcctg tgatagcatt accaccgtag ccatcataac cataaccgta agcagcacct
     3121 ccgttgcctc cagcgaacgt gcccttattg attacagaga ggctgcttcc tgtgatggca
     3181 tcacctccat taccgccatc accctcacca taattgttac ctccattacc accggaaata
     3241 gtccctttgt tgattatggg tagattgact cctgtgacgg catcacctcc attcccccca
     3301 tcactatcac tataactatc gccaccatgt ccacctgaaa taatttctcc atttattata
     3361 aacagattgt ctcctgtaac agcctcacca ccatcaccgt tatggtcagc accgctaccg
     3421 ccgctaccac caagaatcat gccttgattg attatagaca agtcagatcc ggtaatagag
     3481 tcaccaccat taccgccaca actattacca tcattattat caccagcacc accatgacct
     3541 gcgctaatca taatatcaga gttaatccgt agcttagttc tagatgcatg agaggggttg
     3601 gaagaagtta tataccacgc atccattcca tcttcaccag ctcccaaggg agaaagtcca
     3661 tcaacaggtg ttaataattt ttcataattg tcctctgaaa aatgaagttc ttgagtaccc
     3721 gaaagaggaa tagcaaaagc tattggcccc ccgagcaaca gggatgcacc aacaacaaaa
     3781 ggagaaaaag acaatttgca tgttttttcc tttaccgtag gtaattctcc ggcccccccc
     3841 tgtgaacatt gggtcatatt acaaaaaaat ttgtgaattt gattcatgca ctatattatc
     3901 agtaagtggt tgataaaccc ctaaaaagat tccgttttat ccggaataaa gggacgatat
     3961 atgcaaaaac atattaaaca aagcctcaac caaaacatga gagctgtgtt atatatcaat
     4021 gcaacgggag aaatttacct gtgtcttgct ttgaaaaaaa gagggggaaa gctatatgtt
     4081 cgataataaa ttaataattt tactatgata gtctgcttca gaccgcaact tttcagttct
     4141 ttctgtacgc ttgcccaaag tttaaccact ttgtttttct atacacccaa tggttctatc
     4201 tgccccttga tgttaatccc caaagccaat aacatgaatg tattcatatc acaactttcc
     4261 taccagactc tccaatgcaa taactgcata attgttttta gtggaaatgt atcgttttct
     4321 taaagagaag aataacattc cattttatta tgttcccaat ttaattatat taatatatat
     4381 tggcatcaat aggaaaatac atcaggagaa atcaaatgca gacatcaaac ataactaacc
     4441 atgaaagaaa tgactcatca tggatgtcaa ctgtcaaatc aactacagaa gtaagttgga
     4501 ataaattgag tttttgtgac gttttactga aaataataac tttcggaata tattctccac
     4561 acgaaactct agccgaaaaa tatagcgaaa aaaaactaat ggatagtttc tcaccatcac
     4621 tatcacaaga taaaatggac ggagagtttg cccacgcaaa catagatggc atttcaatac
     4681 ggctatgcct taacaaaggc atatgttcgg ttttttatct tgatggagat aaaatacaat
     4741 ccactcaact ttcatcaaaa gaatataata acttgttaag ttcactcccc ccaaaacaat
     4801 tcaacttagg aaaagtacat actattacag ctccggtatc agggaatttt aaaactcaca
     4861 agcctgcacc agaagttatt gaaacagcca ttaattgctg tacatcgata ataccaaacg
     4921 atgattactt ccccgttaaa gacactgatt ttaatagtgt ttggcatgat atttacagag
     4981 atattcgagc atctgacagc aatagtacaa aaatatattt caacaatatt gaaataccac
     5041 taaaattaat tgcagatcta attaatgagt tagggattaa tgaattcatt gatagcaaaa
     5101 aagagcttca aatgctaagt tacaaccaag taaataaaat aatcaattca aacttccccc
     5161 aacaagacct atgttttcaa acagaaaaac ttttgtttac ttcactcttt caagaccctg
     5221 catttatatc cgcactaaca tctgcattct ggcaatctct tcacatcacg tcttcctctg
     5281 tggaacacat atatgcccaa attatgtccg aaaacataga aaacaggctt aatttcatgc
     5341 ctgaacaacg agttattaac aattgtggac atattataaa aatcaacgca gttgtcccta
     5401 aaaacgacac tgcaatctct gcctctgggg ggagggctta cgaagttagc tcatcaatat
     5461 taccatcgca cataacatgt aatggtgttg gtattaataa aatagaaaca agctatctcg
     5521 ttcatgctgg aacacttcca agcagtgaag ggcttcgcaa tgctatccct ccagaaagtc
     5581 gtcaagtatc atttgccatc atatctcctg atgtttaagc caatattata ttggctgcca
     5641 gactgtaaaa aaacgttctt cagaacagct ctataaacta ttaaaccaaa gctaaaagga
     5701 tggggaccaa tagaatctca gcccatcctt tttatatcat tatgaaccgc cccggaaatc
     5761 ctggagacta aactccctga gaaagaggta aacaggatga ctaaaaatac acgtttttcc
     5821 cctgaagtcc gtcaacgggc agttcgtatg gttctggaaa gtcagggcga atatgactca
     5881 caatgggcag cgatttgttc cattgctcca aagattggct gtatactgga gactctgcgt
     5941 gtctgggtac gccagcatga gcgggatacc gggggcggtg agg
//
LOCUS       DADMHC010000212         5980 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.215, whole genome shotgun sequence.
ACCESSION   DADMHC010000212 DADMHC010000000
VERSION     DADMHC010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5980)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5980)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5980
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.215"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            251..616
                     /gene="queD"
                     /locus_tag="JNZ57_003544"
     CDS             251..616
                     /gene="queD"
                     /locus_tag="JNZ57_003544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HAY8829622.1"
                     /translation="MMSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGE
                     VDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPL
                     LSAVMVKETCTAGCIYRGE"
     gene            694..1962
                     /locus_tag="JNZ57_003545"
     CDS             694..1962
                     /locus_tag="JNZ57_003545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HAY8829623.1"
                     /translation="MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNL
                     SGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGVTTFSSLQPGGESWSVLRA
                     RFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVL
                     AERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGA
                     FLYTNQQTPSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVP
                     EGGLHSMPVQYAGNGWQLVGDALRSCVNTGISVRGMDMALTGAQAAQTLISACQHREP
                     QNLFALYHHNVERSLLWDVLQRYQHVPALLQRPGWYRAWPALMQDISRDLWDQGDKPV
                     PPLRQLFWRHLRRHGLWHLAGDVIRSLRCL"
     gene            1953..2213
                     /locus_tag="JNZ57_003546"
     CDS             1953..2213
                     /locus_tag="JNZ57_003546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HAY8829624.1"
                     /translation="MSVAHNLWRVADAPHIVPADSVERHMVQWLINACPAGLFSLTPE
                     GDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG"
     gene            2230..2805
                     /locus_tag="JNZ57_003547"
     CDS             2230..2805
                     /locus_tag="JNZ57_003547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate responsive antiterminator"
                     /protein_id="HAY8829625.1"
                     /translation="MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTIS
                     NIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGF
                     FCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVC
                     DEEDACNAINAGVVALSTTNTGVWTLAKKLL"
     gene            complement(2953..3813)
                     /locus_tag="JNZ57_003548"
     CDS             complement(2953..3813)
                     /locus_tag="JNZ57_003548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HAY8829626.1"
                     /translation="MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQV
                     LDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHW
                     GNALTATLQTEKRPLCLSLARQAGAAKNATLPSGIQQLNIVPGALPDWLVSTEDLKNV
                     TRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISG
                     HLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEA
                     LVTNIHADCQ"
     gene            complement(3810..4589)
                     /locus_tag="JNZ57_003549"
     CDS             complement(3810..4589)
                     /locus_tag="JNZ57_003549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HAY8829627.1"
                     /translation="MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADE
                     QAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPE
                     FVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWTCFTQVERFTLDALFI
                     TLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIICKTVAAEMPA
                     MQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP"
     gene            complement(4567..5976)
                     /locus_tag="JNZ57_003550"
     CDS             complement(4567..5976)
                     /locus_tag="JNZ57_003550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8829628.1"
                     /translation="MTGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRI
                     AALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWIS
                     DHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFS
                     PRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWG
                     TPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFN
                     SVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHR
                     KFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIR
                     SLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKA
                     LPLVAAGNVGGANEHSVSV"
BASE COUNT         1460 a         1624 c         1522 g         1374 t
ORIGIN      
        1 aagataaggt taacggggtg aacggtgtgg attaaagacg ggatagcgat aactaataac
       61 caaatcgact aacctgtttt agcaatagtc tttaacaaca aaatagatta accaacccaa
      121 tgaaaaacaa atgaatttag ccaatcatta agataaatca gcgattttgc gcaacaaagt
      181 cgttttagat aatgcgaaaa aacagccttt ccggtactct acggcggttt tatcgtcctg
      241 tagagaaatt atgatgtcca ccacgttatt taaagatttc accttcgaag ccgctcaccg
      301 cttaccacac gtcccggaag ggcataaatg tggtcgcctg cacgggcatt cctttatggt
      361 gcgactggaa attaccgggg aagtcgatcc gcatacgggc tggattatcg atttcgctga
      421 actaaaagcg gcgtttaagc caacttatga gcgcctcgat caccattatc tcaatgatat
      481 tccaggtctg gaaaacccaa ctagcgaagt tttagcaaaa tggatttggg atcaggttaa
      541 acccgttgtg ccgctgttaa gtgcggtgat ggtaaaagaa acctgcaccg ctggttgtat
      601 ctatcgcggc gaatgataag agtgtgtcgg cggtcaattt cccttaagta acgctatgtt
      661 agggtattgt gttcaggata tctggggcat gacatggaag acgactgcga cattattatt
      721 attggtgccg gtattgcagg caccgcttgc gcgttacgct gcgcgcgagc gggtttatcc
      781 gttttgttac tggaacgcgc tgaaatcccc ggcagcaaaa atctttccgg cggacggtta
      841 tatacccatg cactcgcgga actcctccct cagtttcatc tgaccgcgcc tcttgaacga
      901 cgcatcactc acgaaagcct ttccctgtta acgcccgatg gcgtaacgac gttttccagc
      961 ttacagcccg gcggtgaatc ctggagtgta ttacgtgcac ggttcgatcc gtggctggtt
     1021 gccgaagccg aaaaagaagg tgtcgaatgt atccccggag cgacggtgga tgcactgtat
     1081 gaagaaaacg gcagagtctg tggcgttatt tgtggtgacg atattctccg cgcccgttat
     1141 gtggtgctgg cagaaggtgc caacagcgtc ctggctgaac gtcacgggtt agtgactcgt
     1201 cctgctggcg aagcgatggc gttggggatc aaagaagtgc tgtcgctgga aacatccgct
     1261 attgaagaac gttttcatct ggagaataac gaaggcgcag cgttgctgtt cagcggcgga
     1321 atctgtgatg acttacccgg cggcgcattt ctttatacta atcaacaaac gccctcgtta
     1381 gggattgttt gcccgctctc ttcccttacg caaagtcgtg ttccggcaag cgagctgctg
     1441 actcgcttta aagcgcatcc ggcagtgcgc ccgcttatca aaaacacgga atcactggag
     1501 tatggtgcgc atctggtgcc agaaggtggc ttgcacagta tgccggtgca atacgccggt
     1561 aacggctggc agctggtggg cgatgcgttg cgcagttgcg tcaataccgg aatttccgtg
     1621 cgcggcatgg atatggcgct gactggcgcg caggcggcac aaacgctgat aagcgcctgc
     1681 cagcaccgcg agccgcaaaa tctgtttgcg ctttatcatc acaacgtaga gcgcagcctg
     1741 ctatgggatg ttctacaacg ttatcagcat gttccggcgc ttttgcaacg ccctggctgg
     1801 tatcgggcgt ggcctgcgtt aatgcaggat atttcccgcg atttatggga tcagggtgat
     1861 aaacctgttc caccgctgcg ccagttattc tggcgtcatt tacgtcgtca tggcctgtgg
     1921 catctggcgg gcgatgttat caggagtctg cgatgtctgt agcccataat ctctggcgcg
     1981 ttgctgatgc gccgcacatt gttccggctg actccgttga gcgtcatatg gtacaatggt
     2041 tgattaacgc ctgtccggca ggtctttttt cgctcacacc ggaaggtgac ttacgcgttg
     2101 attatcacgg ctgcctggag tgtggcacct gccgtttgct gtgcgacgaa tccacactac
     2161 aacagtggcg ctatccgcct tccggattcg gcatcaccta ccgctttgga taaataataa
     2221 ggataattta tgcccctctt acacctgctc cgccagaatc cggtgattgc tgccgttaaa
     2281 gataatgcca gcctgcaact ggcaatcgac tctgaatgcc agtttatttc cgtgttgtac
     2341 ggcaatatct gcaccatcag taatatcgtt aaaaagatta agaacgccgg gaaatatgct
     2401 tttattcatg ttgatttgct ggaaggcgcg tcaaataaag aagtcgtgat tcagtttttg
     2461 aaactggtga ccgaggcgga cggcattatc agtaccaaag cctcaatgtt gaaagcggca
     2521 agagcggaag gttttttctg tattcatcgc ctgtttattg ttgattcaat ttcgtttcac
     2581 aacattgata agcaagttgc gcaatcgaat ccggattgta ttgagatcct gccaggctgt
     2641 atgcccaaag tgctgggctg ggtgacagag aaaatccgcc aaccgctgat tgccggtggg
     2701 ctggtgtgcg atgaagaaga tgcgtgtaat gcgattaacg cgggtgtcgt ggcgctttcc
     2761 accacgaata ccggggtctg gacgttagcg aaaaaattac tttgacggga taatcgtaac
     2821 caattgaatt tggtttgatt tgtaggccgc acgccacatc cgacattcag cgcctgatgc
     2881 gacgcttgac gcgtcttatc aggcctacaa gtccccaggc cagaaccgta ggcaggatca
     2941 tccggcaaca cattattggc aatctgcgtg aatgtttgtc accagtgcct ccagcaccac
     3001 tttccagtca tcaaccacgc caacatctgc ctgtgaaaat accgcagcgc tggcgtcatg
     3061 attaatcgcc accacaaact tgctattgcg tacgcccgcc attaacgctg ctgcgccgga
     3121 agcgccaaca acaatacaca cctcaggtgc cagcaaatgt ccggaaatac caatcacttt
     3181 ttcagcatca acgccaccgt tcatcactcg cgcccgactg tagcccactt cggctcccag
     3241 cttttctgcc agcatagcga tttcctggtt atctgcctct ccgccctgcc ccaccaccag
     3301 cacccgtctg gcctcagcta atgggtcgcg agtaacattt ttcagatcct ctgtgctaac
     3361 cagccagtcg ggaagcgcac ccgggacaat gttcagttgt tgtattccag agggcaacgt
     3421 ggcgtttttc gctgctcccg cctgacgcgc cagggaaagg catagcgggc gtttttctgt
     3481 ttgcagcgtc gccgttagcg catttcccca gtgggatttg cgcacgctta cggttggaat
     3541 atctaacgaa gtcacctggc agatgcttgc accatgtaaa cgccaggcca gccgggtcga
     3601 cagttcatcg ccaaacgttc ccggcggaaa gagaacaacg tccgcaggcg ttcgctgcca
     3661 ctgttccacc aacgcatcca gcacctgttc cgccactaca ggctgaggtt caatctgcca
     3721 gtgcgccagg gtacaaccac tgaaatcctg cgccgccagc cagcttgcta ttgcggcatt
     3781 ctcctgattt attgtcacaa ttgcgatatt catggctgca tcctttggcg taaatagtcc
     3841 tgccatagct tttgagcttt ttctgctacc gtttgcccat caatcagcgt cgctccgcgt
     3901 cgttgctctg ctcttgccag ttgcagacac tgcatcgctg gcatttcggc agcaacagtt
     3961 ttacagataa tttctgcttt ccccgcagcc attcgctggc gcattcccgg tactggcaag
     4021 gccacttcac cgcactgacg cacggcaatc accgcaggca agcgaacccg gcaacaacgc
     4081 aacccatgtt cagtacgctg ttcgagggtg ataaacagcg cgtcgagagt gaaacgctcc
     4141 acctgggtga agcaggtcca gcccagcatt tccgccagca aaaatggcgt ttgcccattc
     4201 tgcccttcgc tgctttggca gccggtaatt atcagatcca gcggattctg atgctgccat
     4261 tcggcaatat ggcgagcgac aaattccggc gcaaagcgca gatctgccgc cgtctccagc
     4321 aatacagctt cctcaaaccc aagagccatg agatagcgca gccagtgcaa tgcccgttca
     4381 tcccccatgc tcaacgcggt taaagacatc ggcgtaccgt tttttctctg cgccaacagc
     4441 agcgcggcag cggcctgttc atcagcaccg agtaaacttc gcagtagcga aatatccggt
     4501 ccgcttttac cctgagccgc cgcctgccac tctttttccg ccagcattcc ggcatccggt
     4561 tcggctttaa acgctaacag aatgttcatt cgcacctcct acatttcccg ccgccaccag
     4621 cgggagggct ttagtttctg gtgcccatag ccaggtcaca acaaaaccaa ccaacaacac
     4681 tgtcgccagg agcaataagg tgacttgcat tccccactgc gccagcaccc acggcagcag
     4741 gccagtactt accgccgcgc caagtcgact catggcggtg gcaaaaccga cgcccagcga
     4801 gcgaatgtca gtaggaaaac tttccgcagg caaaatgccc accagattac tgactgccga
     4861 aatggtggtg ctgaagagaa caaaaagcag cagcgttaat gaactgccgg aaggcaaaca
     4921 ggccattact accagcgttg ccgccagcag caaaaaactt cccagcaaaa atttgcgatg
     4981 tgccagcagg tgcgtcagaa ctaatcccag cagcgcgccc acaattaaca acgcattaag
     5041 catcaggctg gcagtcagcg catcttccag accaatagtc tgggcgatag ttggcagcca
     5101 ggtataaatc acaaaccatg ggattacgag gcagacaaag aagacgctgt taaacgccgt
     5161 gcgccgccag taacgcgaag agaacaaggt tttgatgtgt ttatgggtcg ccgttaccac
     5221 ttcatcgccc agtaaaacat ggggaccaaa atagcgatgc acgatagcgt gagcttctgc
     5281 aaaacgcccc tggcgcagta gccagcgtgg tgattctggc gttccccagc gtaataacgt
     5341 aatcaacaac gcgggcagag ctgccgatgc cagtagccag cgccaggcct ccgggttttc
     5401 ggaaataaag tgatgtccgg caatacttgc cagcacatag cctacggtcc acaccacgct
     5461 gaatgcgccc agcaaaatac cgcgatggcg gcgcggggaa aattcagcca gcaaggtgtg
     5521 acctactgaa taatcgcctc ccagaccaat gccaatcaaa atgcgcagtc caataagatg
     5581 ctctggcgtg gtggcaaaaa attgtaaaaa cgaagcaagc gtaatcagca aaaagctgaa
     5641 ggtgaagatt ttttgccgac caatatggtc ggagatccac ccaagaacca ggctgccaag
     5701 gaacaaacca aggagcgccg agccgccgat cattcccgcc ataaacggcg tcagttgcat
     5761 ggcgggcgta agctgaataa tggcgtaacc aatgacgccg agaacataac cgtcggtcag
     5821 gtgtgcgccg aaagtgagcg cagcaatgcg gcagtgaaaa cggttaagcg gtaaatcatc
     5881 cattcgcacc ggtgaagtgt tcatctttac cccttcattg tccggtaata agaacggctt
     5941 ctcgcctgag aagccgaaaa ggcaacgtcc cgtcatcgcg
//
LOCUS       DADMHC010000213         5948 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.216, whole genome shotgun sequence.
ACCESSION   DADMHC010000213 DADMHC010000000
VERSION     DADMHC010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5948)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5948)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5948
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.216"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(16..522)
                     /gene="mug"
                     /locus_tag="JNZ57_003551"
     CDS             complement(16..522)
                     /gene="mug"
                     /locus_tag="JNZ57_003551"
                     /EC_number="3.2.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G/U mismatch-specific DNA glycosylase"
                     /protein_id="HAY8829629.1"
                     /translation="MVEDILAPGLRVVFCGINPGLSSAGTGFPFAHPANRFWKVIYQA
                     GFTDRQLKPQEAQHLLDYRCGVTKLVDRPTVQANEVSKQELHAGGRKLIEKIEDYQPQ
                     ALAILGKQAYEQGFSQRGAQWGKQTLTIGSTQIWVLPNPSGLSRVSLEKLVEAYRELD
                     QALVVRGR"
     gene            647..722
                     /locus_tag="JNZ57_003552"
     tRNA            647..722
                     /locus_tag="JNZ57_003552"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:680..682,aa:Ile,seq:cat)
     gene            complement(776..1540)
                     /gene="nfeF"
                     /locus_tag="JNZ57_003553"
     CDS             complement(776..1540)
                     /gene="nfeF"
                     /locus_tag="JNZ57_003553"
                     /EC_number="1.16.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent ferric chelate reductase"
                     /protein_id="HAY8829630.1"
                     /translation="MNNSPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDG
                     FTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAID
                     FFIHDGGVASGWAMQAQPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLET
                     LSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYF
                     IWITGEGKVVKNLSRRFEAEQYDPQRVRAAAYWHAK"
     gene            1828..2451
                     /locus_tag="JNZ57_003554"
     CDS             1828..2451
                     /locus_tag="JNZ57_003554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HAY8829631.1"
                     /translation="MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCG
                     DRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYP
                     TLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ
                     NPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD"
     gene            complement(2605..4125)
                     /locus_tag="JNZ57_003555"
     CDS             complement(2605..4125)
                     /locus_tag="JNZ57_003555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311981.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HAY8829632.1"
                     /translation="MSSHPYVTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGFT
                     LQELQGQPHNMVRHPDMPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPM
                     VREGKISGYMSIRTRATDEEIAAVEPLYKALNAGRTSKRIHKGLVVRKGWLGKLPSLP
                     LRWRVRGVMTLMFILLAAMLWFVAAPVVTYFLCVLVVLLASACFEWQIVCPIENVARQ
                     ALKVATGERNSVEHLNRSDELGLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSETLAK
                     GTDELNEHTQQTVDNVQQTVATMNQMAASVKQNSATASAADKLSITASNAAVQGGEAM
                     TTVIKTMDDIADSTQRIGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGE
                     VRHLASRSANAANDIRKLIDASADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQIS
                     HSTLEQADGLSSLTRAVDELNLITQKNAELVEESAQVSAMVKHRASRLEDAVTVLH"
     gene            4542..5921
                     /gene="ygjG"
                     /locus_tag="JNZ57_003556"
                     /pseudo
     CDS             4542..5921
                     /gene="ygjG"
                     /locus_tag="JNZ57_003556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417544.5"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine aminotransferase"
BASE COUNT         1431 a         1622 c         1512 g         1383 t
ORIGIN      
        1 tttcggtggc gttttttatc gcccacgcac taccagcgcc tggtccagct cgcgatacgc
       61 ttcaaccagt ttctctagtg aaacgcgact taaaccgctg ggatttggca gcacccaaat
      121 ctgcgtcgaa ccaatggtga gcgtttgttt cccccactgt gcaccgcgct ggctgaatcc
      181 ctgttcatat gcttgtttgc ccagaatcgc caacgcctgc ggctgataat cttcaatttt
      241 ttcaatcagc ttacgcccac ctgcgtgcag ctcctgcttt gaaacttcat tggcttgcac
      301 cgttggacgg tctaccagtt tggtgacgcc acaacgataa tccagcagat gctgtgcctc
      361 ctgcggcttc aactgacggt cggtaaaccc ggcctgatat atcaccttcc agaagcgatt
      421 tgctggatga gcaaagggaa aaccagtccc ggcggatgaa agcccagggt tgataccgca
      481 aaacacgacc cgtaaccctg gagccaaaat atcctcaacc atatttactc ctttctaaca
      541 tcaccaggaa aagtataacg gattgaaaat acattgttta taaaaacagc aggcgcacgg
      601 taatggctgg attgcgacac ggagttactt tataatccgc taccatggcc ccttagctca
      661 gtggttagag caggcgactc ataatcgctt ggtcgctggt tcaagtccag caggggccac
      721 cagatatagc aaaggctgac gagaaatcgt cagccttttt ctttttatat atcagttact
      781 ttgcgtgcca gtaagccgct gcacgtaccc gctgtgggtc atactgttcc gcttcaaagc
      841 ggcggcttaa attcttaacg actttacctt cgccggttat ccagatgaag taatcatcgg
      901 cagggatttg catctgcgcc agacgcgcat ctaccgcctg ctcatcatgt gccagccatt
      961 cgatattaaa accatcaagg tgcgcgagat aatcctgaca ggcgttatcc cgcacgctaa
     1021 ccagcgcact aacttgcggt ttaacggcaa gtttgctcaa cgtttccagg cggcggcgca
     1081 gtgcgggcat tccggattca tcgcagacat acagctgata cgcgtaatct tccggcacca
     1141 ccagcgaacc gcgcggacca gccaccgtaa gtttatcgcc cggttgcgcc tgcatcgccc
     1201 agccgctggc gaccccaccg tcgtgaataa agaaatcgat cgccagttca tggcgtagtt
     1261 cgtcatacag cggcgtatag tcacgcgacg gtgggcgtgg tccttccggc cagacgatgc
     1321 cctcttccgt taccgttggc ggcacaaagt gagcgtcagg ttgaggaaag aagagtttgc
     1381 tgtgatcgtc aaagccgcgc gatgtaaaac cgtccagcgc ctcgccgccg aggacaatgc
     1441 gctgaaaacc ggcgctgatg cgctcaacgc gtaacacagt cagttcacgg aagcgcagat
     1501 cattgcgaac gcgctgcggg tagcgggggg agttattcat tgttatcgcc ttcgtgatgg
     1561 taatcagata tatctaaata attttcgtaa atgataatga ttgttaatca tgataaatgc
     1621 aagcgattag tagaactgat atgtctatag tctgataaga cgaaccgcct cttctcaggc
     1681 atcattactc aacgccggat gcggcgtgaa cgccttatcc ggcctacgtg tgagatgagt
     1741 ccacatttaa aaatcatttt tattcttgca agagtgctca tatcagatat aaattagata
     1801 tatctaatca agcaaaagga ggctgatatg agccatcatc acgaagggtg ttgtaaacat
     1861 gaaggccagc cacgccatga gggctgctgc aaaggtgaga agtcagaaca cgagcactgc
     1921 ggacacggtc accagcatga acacggtcaa tgctgcggtg atcgccacgg tcgcggcggc
     1981 ggtcgtcggc aacgtttctt tggtcacggt gaattgcgtc tggtgattct ggatattctc
     2041 tcgcgcgatg acagccacgg ttacgaattg attaaagcga ttgagaatct aacccaaggg
     2101 aattacaccc caagcccggg cgtcatctac ccaacgctgg attttctgca ggagcagtcg
     2161 ctgattacca tccgcgaaga ggaaggtggt aagaagcaga ttgcgctgac cgaacaaggc
     2221 gcgcagtggc tggaagaaaa ccgcgaacag gtggagatga ttgaagaacg catcaaagcg
     2281 cgttgcgttg gcgcggcact gcgccagaac ccgcaaatga agcgggcgct ggataatttt
     2341 aaagcggtgc tggatttacg cgtcaaccag agcgatatca gtgatgcaca aataaaaaag
     2401 atcattgcgg tgatcgaccg cgccgctttt gatattacgc aactggatta atcgccgcat
     2461 ccgccagtgg cgcggtgcaa ttgccggatg cgacgcttga cgcgccttat ccggcctaca
     2521 cccgctacac accccgcagg cctgataaga tgcgccagca tcgcatcagg cattgtgctc
     2581 caaccgccgg atccggcata ccgattaatg cagcaccgtc accgcgtctt ccagtcggct
     2641 ggcgcggtgt ttcaccatcg ccgacacctg cgcactctct tccaccagct cagcattttt
     2701 ctgggtgatc aggttaagct catccactgc acgggtcagg ctggaaagcc catcggcctg
     2761 ttccagcgtt gaatggctaa tctgggcgat caactgggtg acgtttttca cctgtgccac
     2821 aatatcttcc atcgtccgtc cggcggcgtg tacctgctgc gaaccggatt gcaccttatc
     2881 agcactggca tcaatcagct tgcgaatatc gttggcagca ttagcgctgc ggctggctaa
     2941 atgacgcact tcccctgcca ccactgcaaa acctttgccc tgttcgccgg cacgcgccgc
     3001 ttccaccgcc gcattcaggg ccagaatatt ggtctgaaac gcaatatcgt taatcagcga
     3061 agtaatggtg ccaatgcgct gggtactgtc ggcgatatcg tccattgtct tgatcaccgt
     3121 ggtcatcgcc tccccaccct gcactgccgc attactggcg gtgatagaaa gtttatcggc
     3181 agccgacgcc gtggcagagt tctgtttcac cgacgccgcc atttggttca tggtcgccac
     3241 cgtttgctga acgttatcaa ctgtctgctg ggtatgttcg ttcagttcat cggtgccttt
     3301 cgccagcgtc tcactgccat ttctgacact ggacacctgg cttgagacat cgttaattag
     3361 ccaacggcac atcaggccaa gctgccctac cgcgcgtaat gtcagcccca gctcatcgct
     3421 gcgattcagg tgctcaacac tattacgctc tccggtcgcc accttcagtg cctgacgggc
     3481 aacattttct atcgggcaca caatctgcca ttcaaaacaa gcgcttgcca acaataccac
     3541 taacacacag aggaaatacg tcaccaccgg ggcagcaaca aaccaaagca tggccgccag
     3601 caagataaac atcagggtca taactccacg cacccgccag cgaagcggta atgaaggcag
     3661 tttacccagc cagcctttac gcaccaccag gcctttatga atacgcttac tggtacgtcc
     3721 ggcgttcagc gctttgtaca gcggctccac cgccgcaatc tcttcatccg tcgcccgggt
     3781 acgaatcgac atatagccac tgatttttcc ctcgcgcacc atcggtaccg cattggcccg
     3841 cacccaataa tggtcgccat ttttgcggcg atttttcacg atgccgctcc agggctcccc
     3901 ttttttcagg gtgaaccaca tatccgcaaa cgccgctttt ggcatatccg ggtgacgcac
     3961 catattgtgc ggctgccctt gtaactcttg caaggtaaag ccgctcacct gcacaaaagt
     4021 gtcattagca tgagtgatat agctttgcag atcggtagtg gacatcagag tggtatcgtc
     4081 cgccagcggg gtattttgct gggtgacata cggatgagaa gacatgttcg cgtcctatgc
     4141 aggttatatg gttgttaact tcttgtcaga gtttatgtcg gccccgctgc ggttatcttt
     4201 aaccgattaa tttgatttag atcgcaattt gcgattaaag cacaaatcta attccttgat
     4261 ttaaaatact ttcactctgt tactatacga aaacgttaat tatcttgccc aaaatcaagc
     4321 aattatcgcc ctgaaaacgt gcatttgcac agcaatcatc aaatccatac ccgacaaaaa
     4381 ccgtgcaaaa taacaacgaa tgttaacaaa tagcattaaa tactgcgcaa atgataacca
     4441 catttgtgtt tatcccgatt ttcgcgatcg cagccggagt ggcgcaatcc ctgcaatact
     4501 taaatcggta tcatgtgata cgcgagcctc cggagcatat tttgaacagg ttaccttcga
     4561 gcgcatcggc tttagcgtgc agcgcccacg ccctgaatct cattgagaag cgaacgctgg
     4621 atcatgagga gatgaaagca cttaaccgag aggtgattga atacttcaaa gagcatgtca
     4681 atccggggtt tttagagtat cgcaaatctg ttaccgccgg cggggattac ggagccgtag
     4741 agtggcaagc gggaagttta aatacgcttg tcgacaccca gggacaggag tttatcgact
     4801 gcctgggagg ttttggaatt ttcaacgtgg ggcaccgtaa tccagttgtg gtttccgccg
     4861 tacagaatca acttgcgaaa caaccgctgc acagccagga gctgctcgat ccgttacggg
     4921 cgatgttggc gaaaaccctt gctgcgctaa cgcccggtaa actgaaatac agcttcttct
     4981 gtaatagcgg caccgagtcc gttgaagcag cgctgaagct ggcgaaagct taccagtcac
     5041 cgcgcggcaa gtttactttt attgccacca gcggcgcgtt ccacggtaaa tcacttggcg
     5101 cgctgtcggc cacggcgaaa tcgaccttcc gcaaaccgtt tatgccgtta ctgccgggct
     5161 tccgtcatgt gccgtttggc aatatcgaag ccatgcgcac ggctcttaac gagtgcaaaa
     5221 aaaccggtga tgatgtggct gcggtgatcc tcgaaccgat tcagggtgaa ggtggcgtaa
     5281 ttctgccgcc gccgggctat ctcaccgccg tacgtaagct atgcgatgag ttcggcgcac
     5341 tgatgatcct cgatgaagta caaacgggca tggggcgcac gggcaagatg ttcgcctgcg
     5401 ggcatgagaa cgtacagccg gatatcctct gccttgccaa agcgctcggc ggcggcgtga
     5461 tgccgattgg cgcgaccatc gccactgaag aggtgttttc agttctgttc gacaacccat
     5521 tcctgcatac caccaccttt ggcggcaacc cgctggcctg tgcggcggcg ctggcgacca
     5581 tcaatgtgtt gctggagcag aacttaccgg ctcaggctga gcaaaaaggc gatatgttgc
     5641 tggacggttt ccgtcaactg gcgcgggaat atcccgatct ggtacaggaa gcgcgtggta
     5701 aagcgatgtt gatggcaatt gagtttgttg ataacgaaat cggctataac tttgccagcg
     5761 agatgttccg ctagcgcgta ctggtggccg gaacgctcaa taacgccaaa acgatccgca
     5821 ttgaaccgcc actgacactg accattgaac agtgtgaact ggtgatcaaa gcggcgcgta
     5881 aggcgctggc ggccatgcga gtaagtgtcg aagaagcgta atatcaaatc ggatggcgat
     5941 acgacgtc
//
LOCUS       DADMHC010000214         5920 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.217, whole genome shotgun sequence.
ACCESSION   DADMHC010000214 DADMHC010000000
VERSION     DADMHC010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5920
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.217"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            334..789
                     /locus_tag="JNZ57_003557"
     CDS             334..789
                     /locus_tag="JNZ57_003557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001462353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2726 domain-containing protein"
                     /protein_id="HAY8829633.1"
                     /translation="MVAEGILLERKEWLITRCEKMYFDNLEKWFGHYCHIHCQASLGR
                     LINFPEQPEFSEEERKRFFAIYNGMAMDYVLVSKKNNKKVCVIELDDPSHERADRIIR
                     DRWLDTIMTLARVPFVRASVTKLEEIPPVWETRDKIRPLVAATKSEPVH"
     gene            complement(880..1016)
                     /locus_tag="JNZ57_003558"
     ncRNA           complement(880..1016)
                     /ncRNA_class="other"
                     /locus_tag="JNZ57_003558"
                     /product="RtT sRNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00391"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="rtT sRNA, processed from tyrT transcript; Derived
                     by automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00391"
     gene            complement(1061..1148)
                     /locus_tag="JNZ57_003559"
     tRNA            complement(1061..1148)
                     /locus_tag="JNZ57_003559"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1112..1114),aa:Ser,seq:gga)
     gene            1382..2320
                     /gene="ghrA"
                     /locus_tag="JNZ57_003560"
     CDS             1382..2320
                     /gene="ghrA"
                     /locus_tag="JNZ57_003560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415551.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase GhrA"
                     /protein_id="HAY8829634.1"
                     /translation="MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALV
                     WHPPVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEY
                     AVSQVLHWFRRFDDYRIQQNSSHWQPLPEYHWEDFTIGILGAGVLGSKVAQSLQTWRF
                     PLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPD
                     GAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHV
                     AAITRPAEAVEYISRTIAQLEKGERVCGQVDRARGY"
     gene            2375..3112
                     /locus_tag="JNZ57_003561"
     CDS             2375..3112
                     /locus_tag="JNZ57_003561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase"
                     /protein_id="HAY8829635.1"
                     /translation="MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDM
                     EDAPHHWHFINMRIWPRVVDGVGILRGIEANIKNVDGEIDCSGKMFDSLDLIIAGFHE
                     PVFAPHDKATNTQAMIATIASGNVHIISHPGNPKYEIDVKAVAEAAAKHQVALEINNS
                     SFLHSRKGSEDNCRAVAAAVRDAGGWVALGSDSHTAFTMGEFEECLKILDAVDFPPER
                     ILNVSPRRLLNFLESRGMAPIAEFADL"
     gene            3136..3690
                     /locus_tag="JNZ57_003562"
     CDS             3136..3690
                     /locus_tag="JNZ57_003562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HAY8829636.1"
                     /translation="MNEFSILCRVLGSLYYRQPQDPLLVPLFTLIREGKLAANWPLEQ
                     DELLTRLQKSCDMAQVSADYNALFIGDECAVPPYRSAWVEDATEAEVRAFLSERGMPL
                     ADTPADHIGTLLLAASWLEDQSTEDESEALETLFSEYLLPWCGAFLGKVEAHATTPFW
                     RTMAPLTRDAISAMWDELEEDSEE"
     gene            3792..4283
                     /locus_tag="JNZ57_003563"
     CDS             3792..4283
                     /locus_tag="JNZ57_003563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1097 domain-containing protein"
                     /protein_id="HAY8829637.1"
                     /translation="MNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQ
                     GGLKGLAISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLS
                     FVPGTFIGACATFAGQGDWKLVLPSLALGLVFGYAMKNSGLWLAARSAKTAHREQEIK
                     NKA"
     gene            complement(4347..5180)
                     /gene="csgG"
                     /locus_tag="JNZ57_003564"
                     /pseudo
     CDS             complement(4347..5180)
                     /gene="csgG"
                     /locus_tag="JNZ57_003564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309441.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="curli production assembly/transport protein
                     CsgG"
     gene            complement(5207..5623)
                     /gene="csgF"
                     /locus_tag="JNZ57_003565"
     CDS             complement(5207..5623)
                     /gene="csgF"
                     /locus_tag="JNZ57_003565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curli production assembly/transport protein
                     CsgF"
                     /protein_id="HAY8829638.1"
                     /translation="MRVKHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNS
                     AQAQNSYKDPSYNDDFGIETPSALDNFTQAIQSQILGGLLSNINTGKPGRMVTNNYIV
                     DIANRDGQLQLNVTDRKTGQTSTIQVSGLQNNSTDF"
     gene            complement(5648..>5920)
                     /gene="csgE"
                     /locus_tag="JNZ57_003566"
     CDS             complement(5648..>5920)
                     /gene="csgE"
                     /locus_tag="JNZ57_003566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curli production assembly/transport protein
                     CsgE"
                     /protein_id="HAY8829639.1"
                     /translation="GHDFYRAFSDKWESDYTGNLTINERPSARWGSWITITVNQDVIF
                     QTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF"
BASE COUNT         1467 a         1366 c         1488 g         1599 t
ORIGIN      
        1 atactaacta tatattgatc gttgcattgt tggcatgtaa cacgctgcag cgagtaacat
       61 tggtaatgaa atataatcaa catggatagg tgaaaattaa ttatgagctt tatggctttt
      121 gtaacttgtt tgacaattgc atttatcgcc ggttttgctg ttgccagaaa attgacactc
      181 cgaaaagttg cctcatcggt aatcatcgct aaatcgcaac ccgtcccttc atctgcaact
      241 tcccctgccg ctaaggcgtc gacaaggagc tatataccgc agaaaaccta tcgtgactct
      301 cgttggcaag agcgagatga gttatttcag ggaatggttg ccgaaggtat tttattggaa
      361 agaaaagagt ggttaatcac tcgttgtgaa aaaatgtatt tcgataatct ggaaaaatgg
      421 tttggacatt attgtcatat ccattgccag gcctctctgg ggcgcttgat caactttcca
      481 gaacaacctg agtttagcga agaagaaaga aagcgtttct ttgcaattta taatggcatg
      541 gcaatggatt atgttctggt ttcaaagaag aacaataaaa aagtctgtgt tattgagctg
      601 gatgacccga gtcatgaaag ggcggatcgc attattcgtg accgttggtt ggatacaatt
      661 atgactcttg cacgggtgcc ttttgtacga gcttctgtca ctaaattgga ggaaattcct
      721 ccggtctggg agactcgtga caagattcgc ccattagtcg cggcgacaaa gagtgaaccg
      781 gtgcattaac taagtatccc ggtcggggct tctcatcccc ccggtgtgtg caatatacga
      841 aaaaaagccc gtaccttcgt acgagctctt ctttaaagat ggcggtgagg gggggattga
      901 ctcgcttcgc tcgccctgcg ggcagcccgc tcactgcgtt cacggtctgt ccaactggct
      961 gtcgccagtt gtcgaacccc ggtcggggct tctcatcccc ccggtgtgtg caatatacga
     1021 aaaaaaagcc cgtactttcg tacgagctct tctttaaata tggcggtgag ggggggattc
     1081 gaacccccga tacgttgccg tatacacact ttccaggcgt gctccttcaa ccgctcggac
     1141 acctcaccaa attgttgttc ctgtcttgct ggaacgggcg ctaatttagg gaaatcatga
     1201 cctgaggtca acaaactttt tgaaaaaatc gcgcgtttat tcaaacttca atcaatgtgt
     1261 ggttttaata agcgaaatct gctttttttg ccaccgacca cggatttgtt atgctggtgg
     1321 cctttgtaga tcataacgat aagtgcgaat aaatttcgca caacgctttt cgggagtcag
     1381 tatggatatc atcttttatc acccaacgtt cgatacccaa tggtggattg aggcactgcg
     1441 caaagctatt cctcaggcaa gagtcagagc atggaaaagc ggagataatg actctgctga
     1501 ttatgcttta gtctggcatc ctcctgttga aatgctggca gggcgcgatc ttaaagcggt
     1561 gttcgcactc ggggccggtg ttgattctat tttgagcaag ctacaggcac accctgaaat
     1621 gctgaaccct tctgttccac tttttcgcct ggaagatact ggtatgggcg agcaaatgca
     1681 ggaatatgct gtcagtcagg tgctgcattg gtttcgacgt tttgacgatt atcgcatcca
     1741 gcaaaatagt tcgcattggc aaccgctgcc tgaatatcat tgggaagatt ttaccatcgg
     1801 cattttgggc gcaggcgtac tgggcagtaa agttgctcag agtctgcaaa cctggcgctt
     1861 tccgctgcgt tgctggagtc gaacccgtaa atcgtggcct ggcgtgcaaa gctttgccgg
     1921 acgggaagaa ctgtctgcat ttctgagcca atgtcgggta ttgattaatt tgttaccgaa
     1981 tacccctgaa accgtcggca ttattaatca acaattactc gaaaaattac cggatggcgc
     2041 gtatctcctc aacctggcgc gtggtgttca tgttgtggaa gatgacctgc tcgcggcgct
     2101 ggatagcggc aaagttaaag gcgcaatgtt ggatgttttt aatcgtgaac ccttaccgcc
     2161 tgaaagtccg ctctggcaac atccacgcgt gacgataaca ccacatgtcg ccgcgattac
     2221 ccgtcccgct gaagctgtgg agtacatttc tcgcaccatt gcccagctcg aaaaagggga
     2281 gagggtctgc gggcaagtcg accgcgcacg cggctactaa taaagcatca ggattcctgc
     2341 tatccttggc gggaattgaa tacaggagag agttatgtat cccgtcgacc ttcatatgca
     2401 taccgttgcc agcacacatg catatagcac attgagtgat tacattgccc aggccaaaca
     2461 aaagggcatt aaactttttg cgatcaccga tcatggcccg gatatggaag atgctccgca
     2521 tcactggcac ttcattaaca tgcgtatctg gccgcgagtg gttgatgggg tagggatcct
     2581 gcgcggcatc gaagctaaca ttaaaaatgt tgatggtgaa attgattgca gcggtaaaat
     2641 gtttgactcg ctggatctga ttattgccgg ttttcatgag ccggtttttg caccacatga
     2701 caaagcgacc aatacacaag cgatgatcgc cactatcgcc agcggcaatg tgcatataat
     2761 aagccatccc ggaaatccca aatatgaaat agatgtgaaa gccgttgctg aagcagccgc
     2821 gaaacatcag gtggcgctgg aaatcaataa ttcttcattt ttacactcac gtaagggcag
     2881 tgaagacaac tgtcgtgcgg tagccgcagc ggtacgtgat gctggaggtt gggtggcatt
     2941 aggctcggat tctcacaccg cgtttaccat gggggaattt gaagagtgtc ttaaaatcct
     3001 cgacgcggta gattttccgc cagagcgcat tttgaatgtt tctccgcgcc gcttactgaa
     3061 cttccttgaa tctcgcggta tggcaccgat tgcggaattt gcagaccttt aattactagt
     3121 aatggaaata tattaatgaa cgagttttct atcctctgtc gtgtgctggg ttcgctctat
     3181 taccgccaac cgcaagatcc tttactggtg ccgctgttta ccctgattcg tgaggggaaa
     3241 ctggctgcga actggccact ggagcaggat gagttactga cgcgtttaca gaaaagctgt
     3301 gatatggcgc aagtctctgc cgattacaat gcgttgttta tcggcgatga atgtgccgtg
     3361 ccgccatatc gtagcgcatg ggttgaggac gcaacggaag cggaagtgcg cgcttttctt
     3421 tccgaacgag ggatgccact ggcggatacg ccagccgatc acatcggcac attgctgctt
     3481 gcggcttcct ggctggaaga tcagtcaacg gaagatgaga gcgaagcact ggaaacactg
     3541 ttcagtgagt atctgttacc ctggtgtggt gcgttcctcg gcaaagtgga ggcccatgca
     3601 accacgcctt tctggcgcac catggcaccg ctaacccgtg atgccattag tgcaatgtgg
     3661 gacgagctgg aagaagattc tgaagagtaa atgtgatcat cgtcactcat aactgcaaca
     3721 gataatttgt tgttgcataa aatgtgtgct cgatctcatt catggccgcg ttttctgcta
     3781 tcatgcgcgg catgaacata cttctctcta ttgcaatcac aacaggcatt ctctccggta
     3841 tctggggatg ggtggctgtt tccctgggct tactaagctg ggcgggcttc ctgggctgta
     3901 cggcctactt tgcctgcccg caaggtgggc tgaaagggct ggcgatctcc gctgcaaccc
     3961 tgcttagtgg cgtggtgtgg gcgatggtca ttatttacgg tagtgcactg gcaccacatc
     4021 tggaaattct cggttatgtc ataaccggta ttgtggcgtt tctgatgtgt attcaggcca
     4081 aacagctgct gctttcattt gttccgggga cgtttatagg cgcatgcgcg acgtttgccg
     4141 ggcagggtga ctggaaactg gtgttacctt cgctggcgct tgggctggta tttggttacg
     4201 caatgaaaaa cagcggcctg tggctggcgg cgcgtagtgc aaagacggct caccgtgagc
     4261 aggaaatcaa aaataaagcg tgaggggcac tcacgctttc gcttaaacag taaaatgccg
     4321 gatgataatt cctgcttttt tatctgtcag gattccggtg gaaccgacat atggcggtat
     4381 ttcaccagaa tgtcattctg ccgttctgct ttattttgca aatcccacag accacggtcg
     4441 ataccatcat taatcaggaa aatgacccct gtttcgatag ccgacatcag acacagcata
     4501 acgggttcgt ttgaggtgta acccacttcc ccttccagca agcgctggta gtcaataaag
     4561 cggaaaaccc cggcctgaac ttcataggaa agtatcgtct tactggtgtt caccgaggag
     4621 aggatctcac cggtactcac attgacgaca cgcaggttca cggcaatctg atcgagctgg
     4681 tattgcgtgt ctgcaccgat cccaaaatat cttgccccaa caccgcccga tttaacgttg
     4741 ctttcataac cgataatcga accttcaacc ataatatttg ccgccgttaa agattgcagc
     4801 gggattcggt tattaatggc aaccgtgccg ttttcttgtg ccgcacgaat aatcttgcgc
     4861 tcgttaagca ggttttgtaa gccctagcgc tccagcggta taaaccagcg agaatctttc
     4921 aatgccgtga ccagcattgc cgtggcgctt tgcggaacag cagtggagaa gttacttgcc
     4981 gggtagggtt taaattgccc ggtttcgtcc tgaatgttgt ataccgaaac aaagatttta
     5041 cccgtcggcg ctggcagatg ggtcaaatct ttgtagctct gagcacgagg cattaatgtc
     5101 ggtctggcgg cttctttagg cggggcggtt aagcatccgc tcagtaacat gacggcaacc
     5161 aaaagaaata agcgctgcat gattattttc cttatgaagc tggggcttaa aaatcggttg
     5221 agttattttg taaacccgaa acctggatgg tcgaggtttg tccggtttta cgatctgtca
     5281 cgttcaactg caattgacca tcgcggttgg caatatcgac aatataattg ttggtcacca
     5341 tgcggcccgg tttaccggta ttaatattcg acagtagccc acctaaaatt tgtgactgga
     5401 tggcctgagt aaagttatct aacgctgagg gtgtttcaat accaaagtca tcgttatagc
     5461 tcggatcttt ataagagttt tgggcctgag cgctatttaa taaaaaagcg ccattatttg
     5521 ggttaccacc aaagtttgga ttacggaact ggaaagtcat ggttccagcc caacttaatg
     5581 gcgaaataag catgagtaga actactgcat gtttgacacg cattgcagcc tccgaacaat
     5641 tttttattta gaattcatca tgcgccaaat cgcccgtact taataacgcc tgatttatct
     5701 ggcgacgatt tagtgcttct tcagtttgaa tcagtgcaaa gacgacagtt ttctcgaagt
     5761 ctcttttcaa cggaaataaa aaagtctgga aaataacgtc ctgattgacc gttatagtga
     5821 tccagcttcc ccatcgtgca ctgggccttt cattaatcgt taagttaccc gtatagtcac
     5881 tttcccattt atcactaaag gctcggtaaa aatcatggcc
//
LOCUS       DADMHC010000215         5819 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.218, whole genome shotgun sequence.
ACCESSION   DADMHC010000215 DADMHC010000000
VERSION     DADMHC010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5819)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5819)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5819
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.218"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..857
                     /gene="pdeC"
                     /locus_tag="JNZ57_003567"
     CDS             <1..857
                     /gene="pdeC"
                     /locus_tag="JNZ57_003567"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="c-di-GMP phosphodiesterase PdeC"
                     /protein_id="HAY8829640.1"
                     /translation="FALPAGILGSLVLLLLWLRIRQNYLSPKRKLQRALEKHQLCLYY
                     QPIIDIKTEKCIGAEALLRWPGEQEQVMNPAEFIPLAEKEGMIEQVTDYVIDNVFRDL
                     GDYLATHADRYVSINLSASDFHTSRLIARINQKTEQYAVRPQQIKFEVTEHAFLDVEK
                     MTPIILAFRQAGYEVAIDDFGIGYSNLHNLKSLNVDILKIDKSFVETLTTHKTSHLIA
                     EHIIELAHSLGLKTIAEGVETEEQVNWLRKRGVRYCQGWFFAKAMPPQVFMQWMEQLP
                     ARELTRGQ"
     gene            complement(860..1183)
                     /gene="soxS"
                     /locus_tag="JNZ57_003568"
     CDS             complement(860..1183)
                     /gene="soxS"
                     /locus_tag="JNZ57_003568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide response transcriptional regulator
                     SoxS"
                     /protein_id="HAY8829641.1"
                     /translation="MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRT
                     VTHQTLGDYIRQRRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSD
                     YRHRL"
     gene            1269..1733
                     /gene="soxR"
                     /locus_tag="JNZ57_003569"
     CDS             1269..1733
                     /gene="soxR"
                     /locus_tag="JNZ57_003569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensitive transcriptional activator SoxR"
                     /protein_id="HAY8829642.1"
                     /translation="MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSG
                     NQRRYKRDVLRYVAIIKIAQRIGIPLATIGEAFGVLPEGHTLSAKEWKQLSSQWREEL
                     DRRIHTLVALRDELDGCIGCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN"
     gene            2279..3628
                     /locus_tag="JNZ57_003570"
     CDS             2279..3628
                     /locus_tag="JNZ57_003570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HAY8829643.1"
                     /translation="MSTPSARTGGSLDAWFKISQRGSTVRQEVVAGLTTFLAMVYSVI
                     VVPGMLGKAGFPPAAVFVATCLVAGLGSIVMGLWANLPLAIGCAISLTAFTAFSLVLG
                     QHISVPVALGAVFLMGVLFTVISATGIRSWILRNLPHGVAHGTGIGIGLFLLLIAANG
                     VGLVIKNPLDGLPVALGDFATFPVIMSLVGLAVIIGLEKLKVPGGILLTIIGISIVGL
                     IFDPNVHFSGVFGMPSLSDENGNSLIGSLDIMGALNPVVLPSVLALVMTAVFDATGTI
                     RAVAGQANLLDKDGQIIDGGKALTTDSMSSVFSGLVGAAPAAVYIESAAGTAAGGKTG
                     LTAITVGVLFLLILFLSPLSYLVPGYATAPALMYVGLLMLSNVAKIDFADFVDAMAGL
                     VTAVFIVLTCNIVTGIMIGFATLVIGRLVSGEWRKLNIGTVVIAVALVTFYAGGWAI"
     gene            3780..5429
                     /locus_tag="JNZ57_003571"
     CDS             3780..5429
                     /locus_tag="JNZ57_003571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter"
                     /protein_id="HAY8829644.1"
                     /translation="MEIFFTILIMTLVVSLSGVVTRVMPFQIPLPLMQIAIGALLAWP
                     TFGLHVEFDPELFLVLFIPPLLFADGWKTPTREFLEHGREIFGLALALVVVTVVGIGF
                     LIYWVVPGIPLIPAFALAAVLSPTDAVALSGIVGEGRIPKKIMGILQGEALMNDASGL
                     VSLKFAVAVAMGTMIFTVGGATVEFMKVAIGGILAGFVVSWLYGRSLRFLSRWGGDEP
                     ATQIVLLFLLPFASYLIAEHIGVSGILAAVAAGMTITRSGVMRRAPLAMRLRANSTWA
                     MLEFVFNGMVFLLLGLQLPGILETSLMAAEIDPNVEIWMLFTDIILIYAALMLVRFGW
                     LWTMKKFSNRFLKKKPMEFGSWTTREILIASFAGVRGAITLAGVLSIPLLLPDGNVFP
                     ARYELVFLAAGVILFSLFVGVVMLPILLQHIEVADHSQQLKEERIARAATAEVAIVAI
                     QKMEERLAADTEENIDNQLLTEVSSRVIGNLRRRADGRNDVESSVQEENLERRFRLAA
                     LRSERAELYHLRATREISNETLQKLLHDLDLLEALLIEENQ"
     gene            complement(5583..>5819)
                     /locus_tag="JNZ57_003572"
     CDS             complement(5583..>5819)
                     /locus_tag="JNZ57_003572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HAY8829645.1"
                     /translation="CMFNTRLYRVNFDEASVQGMGISILRGEENIPIDSDTLVTLQKF
                     FEEDCTSHTGMSQTEDNINAVAMKITADIMQYAD"
BASE COUNT         1258 a         1376 c         1604 g         1581 t
ORIGIN      
        1 tttttgcgtt gcccgccggt attttgggga gtcttgttct gctattactc tggctacgta
       61 ttcgacaaaa ctatttgtct cccaaacgca aattgcaacg cgctctagaa aaacatcaac
      121 tttgtcttta ttaccagcca ataatcgata tcaaaacaga aaaatgtatc ggcgctgaag
      181 cgttgttacg ttggcctggt gagcaggagc aagtaatgaa tccggcagag tttattccgc
      241 tggcagaaaa ggaggggatg atagaacagg taactgatta tgttattgat aatgtcttcc
      301 gcgatctggg cgattacctg gcaacacatg cagatcgcta tgtttctatt aacctgtcgg
      361 cctccgattt tcatacgtca cggttgatag cgcgaatcaa tcagaaaaca gagcaatacg
      421 cggtgcgtcc gcagcaaatt aaatttgaag tgactgagca tgcatttctt gatgtcgaaa
      481 aaatgacgcc gattattctg gctttccgcc aggctggtta cgaagtggca attgatgatt
      541 ttggtattgg ctactctaac ttgcataacc ttaaatcatt gaatgtcgat attttgaaaa
      601 tcgataaatc gtttgttgaa acgctgacca cccacaaaac cagtcatttg attgcggaac
      661 acatcatcga gctggcgcac agcctggggt taaaaacgat cgctgaaggc gtcgaaactg
      721 aggagcaggt taactggctg cgcaaacgcg gcgtgcgcta ttgccaggga tggttttttg
      781 cgaaggcgat gccgccgcag gtgtttatgc aatggatgga gcaattaccc gcgcgggagt
      841 taacgcgcgg gcaataaaac tacaggcggt ggcgataatc gctgggagtg cgatcaaact
      901 gccgacggaa aacgcgggag aaggtctgct gcgagacata acccaggtcc attgcgatat
      961 caaaaatcgg acgctcggtg gtgcgcaact caacggcggc cagtaacagg cgacgttggc
     1021 gaatgtaatc gccaagcgtc tgatgcgtca ccgtgcggaa cattcgttgc aagtaccact
     1081 ttgaatagcc tgattttttt gcgactacat caatgttaag cggctggtca atatgctcgt
     1141 caatccatgc gataagatcc tgaataattt tctgatggga cataaatctg cctcttttca
     1201 gtgttcagtt cgttaattca tctgttgggg agtataattc ctcaagttaa cttgaggtaa
     1261 agcgatttat ggaaaagaaa ttaccccgca ttaaagcgct gctaaccccc ggcgaagtgg
     1321 cgaaacgcag cggtgtggcg gtatcggcgc tgcatttcta tgaaagtaaa gggttgatta
     1381 ccagtatccg taacagcggc aatcagcggc gatataaacg tgatgtgttg cgatatgttg
     1441 caattatcaa aattgctcag cgtattggca ttccgctggc gaccattggt gaagcgtttg
     1501 gcgtgttgcc agaagggcat acgttaagtg cgaaagagtg gaaacagctt tcgtcccaat
     1561 ggcgagaaga gttggatcgg cgcattcata ccttagtggc gctgcgtgac gaactggacg
     1621 gatgtattgg ttgtggctgc ctttcgcgca gtgattgccc gttgcgtaac ccgggcgacc
     1681 gcttaggaga agaaggtacc ggcgcacgtt tgctggaaga tgaacaaaac taaagcgcca
     1741 caagggcgct ttagtttgtt ttccggtctt tgtctttctc tctatcccgc tggtacacag
     1801 gagggtttcc cccgacgtca acacacctca ttcgagcacg tggtggaggt tccggttggt
     1861 gttgatgctt taattgtatg tcaccgacgt ttcttcgcca gtgtaaaagt atacttttta
     1921 accgcaatat ttttgtcatc tcagacgatt ttttatcgca atcctgaacg gtatacggct
     1981 cgatagcgct gcaatcttgc gcaccgacga taacgtttgc gcatcaattg cctgtttttt
     2041 catcgtcaag acaataaaag agaaaaaagc agcaaacttc ggttgaaaaa gccgctatga
     2101 tcgccggata atcgtttgct ttttttacca cccgttttgt atgcgcggag ctaaacgttt
     2161 gcttttttgc gacgcagtaa attgtcgcaa acctggagca ggaagataac gtttcgctgg
     2221 caggggattg tccgccacgc atcttgacga aaattaaact ctcaggggat gttttcttat
     2281 gtctacgcca tcagcgcgta ccggcggttc actcgacgcc tggtttaaaa tttcacaacg
     2341 tggaagcact gtccgtcagg aagtggttgc cgggttaaca acgtttctgg cgatggtcta
     2401 ctcggtcatc gtcgttccag gtatgttggg taaagcaggc ttcccgcctg cggcagtttt
     2461 cgttgcaacc tgtctggttg ccggactcgg ttctatcgtg atgggtctgt gggctaatct
     2521 gccgttggcg attggttgcg ccatctccct gacggcgttt accgcattca gcctggtgct
     2581 ggggcaacat attagcgtac ctgtcgcgct gggtgccgtg ttcctgatgg gtgtgctgtt
     2641 tacggtaatt tctgccacgg gtatccgtag ctggattttg cgcaacttgc cgcacggtgt
     2701 ggcgcacggc acggggatcg gtatcggtct gttcctgctg ctcattgccg ctaatggtgt
     2761 tggtctggtg attaaaaacc cgcttgatgg tctgcccgtt gcgctgggtg atttcgcgac
     2821 cttcccggtg attatgtcac tggtaggtct ggcggtgatc atcggcctgg aaaaactgaa
     2881 agtccctggt ggcattctgc tgaccattat cggtatctca attgtcggtt tgatcttcga
     2941 tcctaacgtc catttctccg gcgttttcgg catgccttca ttgagcgatg aaaacggcaa
     3001 ttcactgatt ggcagcctgg acattatggg cgcgctgaat cctgtagtcc tgccaagcgt
     3061 tctggcgctg gtgatgacgg cagtatttga tgccaccgga actatccgtg ccgtcgccgg
     3121 ccaggcgaac ctgctggata aagatgggca gatcatcgac ggtgggaaag cactgaccac
     3181 tgactccatg agcagcgttt tctctggcct ggtgggtgct gctccggcag cggtatacat
     3241 cgagtctgcg gcgggtacgg cggcgggcgg taaaaccggt ttgacggcta tcaccgttgg
     3301 cgtgctgttc ctgctgattc tgttcctctc tccgctctct tacctcgttc cggggtatgc
     3361 aacggctccg gcgctgatgt acgttggcct gctgatgctg agcaacgtgg cgaaaatcga
     3421 ctttgctgat tttgttgatg cgatggcggg tctggttacg gcggtattca tcgtgctgac
     3481 ctgtaacatc gtaacaggca tcatgatcgg cttcgcgact ctggtgattg gtcgtctggt
     3541 ttccggcgaa tggcgcaagt tgaacatcgg tacggtcgtt atcgccgtgg cgctggtgac
     3601 cttctatgcg ggtggctggg ctatctaatc tttcatcgga ttctgaaaac gggtggcaat
     3661 ggctgcccgt ttttattttc tccgcacatt gtgtgagctt ttgcgatatt ctgaaaaaat
     3721 gagaattcag gcataacgcc tttctcagat cataaaaaaa catcgcaaac agggaacgca
     3781 tggaaatctt cttcaccata ctgataatga ccctcgtggt ctcgctgtcc ggggtggtca
     3841 ctcgtgtcat gccctttcag atcccgcttc cgcttatgca aatcgccatc ggtgcgctac
     3901 tggcgtggcc gacgtttggt ttgcatgtgg agtttgatcc tgaactcttt ttagtcttgt
     3961 ttatcccgcc gttgctgttc gctgatggct ggaaaacgcc gacccgtgaa tttctcgaac
     4021 atggtcgaga gattttcggc ctcgcgctgg cgctggtggt ggtcaccgtg gtcggcattg
     4081 gcttccttat ttactgggtg gtgccgggca ttccgctgat ccccgccttt gcgctggcgg
     4141 cggtactttc tccgaccgat gctgtggcgc tctccgggat tgttggcgaa gggcgcatcc
     4201 cgaaaaaaat catgggcatt ttgcagggcg aagcgttgat gaatgacgcc tccggcctgg
     4261 tgtcgttgaa gtttgccgtg gcagtggcga tggggacgat gatcttcacc gtcggcggtg
     4321 cgacggtcga atttatgaaa gtagccattg gtggtattct tgccggtttt gtggtgagct
     4381 ggctgtatgg tcgctcgctg cgattcctca gccgctgggg cggtgatgaa cccgcgacgc
     4441 agatcgttct gctgttcttg ctgccattcg cttcttatct gattgccgaa catattggcg
     4501 tttccggcat cctcgctgcg gttgccgccg ggatgaccat cacccgctcc ggtgtgatgc
     4561 gccgtgcgcc gctggcaatg cgcctgcgcg caaacagcac ctgggcgatg ctggaatttg
     4621 tctttaacgg catggtgttc ctgctgttag gtctgcagct gccgggtatt ctggagacgt
     4681 cgctgatggc ggcagaaatc gaccctaacg tcgaaatctg gatgctgttt accgatatta
     4741 ttctgatata tgcggcgctg atgctggtcc gtttcggctg gctgtggacg atgaaaaagt
     4801 tcagcaaccg cttcctgaag aagaagccga tggagtttgg ttcgtggacc acacgagaaa
     4861 tcctgatcgc gtctttcgcc ggggtgcgtg gggcgatcac tctggccggt gtgctctcta
     4921 tcccgctgct cttgccggat ggtaacgtct tcccggcgcg ctatgagctg gtgttcctgg
     4981 cggctggcgt cattctcttc tcgctgtttg tcggcgtggt gatgttgcct attctgctac
     5041 aacacattga agtcgcggat cattcgcaac aattgaaaga ggaacgtatt gcgcgagcgg
     5101 caacggcaga agtggcgatt gtggcgatcc agaaaatgga ggagcgtctg gcggcggata
     5161 ccgaagagaa tatcgataac cagctgctta cggaggtcag ttctcgcgtc attggtaacc
     5221 tgcgtcgtcg cgccgatgga cgtaacgacg ttgaaagttc cgtgcaggaa gagaaccttg
     5281 agcgtcgctt ccgtctggcg gcattgcgtt ctgaacgtgc tgaactgtac cacctgcgcg
     5341 ccacgcggga gatcagcaac gaaacgctgc aaaaattact gcacgatctc gatttgcttg
     5401 aagcgttgct aattgaggaa aatcagtaag ccgaaagcga cgtaaccagg cccgaggtaa
     5461 tctgaaaaag gtgcaatctt ttgcaccttt aacaggttag ctcgggctaa cattcatgat
     5521 tctaaaacaa ataagttatc tctcttgtaa agtcaattca ttggctgttc ttcgacttaa
     5581 cctcaatctg cgtattgcat aatatctgca gtaatcttca tagcgactgc attaatatta
     5641 tcctcagttt gtgacatgcc agtatgagag gtacaatctt cttcaaagaa tttctgtagt
     5701 gttaccaggg tatcactatc aatggggata ttttcctctc cacggagtat ggaaatgccc
     5761 attccttgga cgctagcctc atcaaaatta acccgataga gacgggtatt aaacataca
//
LOCUS       DADMHC010000216         5805 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.219, whole genome shotgun sequence.
ACCESSION   DADMHC010000216 DADMHC010000000
VERSION     DADMHC010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5805)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5805)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5805
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.219"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(214..1137)
                     /locus_tag="JNZ57_003573"
     CDS             complement(214..1137)
                     /locus_tag="JNZ57_003573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310054.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8829646.1"
                     /translation="MEKNSLFSQRIRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSK
                     TLNELEQLTGTRLFERGRQGAQLTLPGEQFLTHAVRVLDAINTAGQSLHRKEGLNNDV
                     VRIGALPTAALGILPSVIGQFHQQQKETTLQVATMSNPMILAGLKTGEIDIGIGRMSD
                     PELMTGLNYELLFLESLKLVVRPNHPLLQENVTLSRVLEWPVVVSPEGTAPRQHSDAL
                     VQSQGCKIPSGCIETLSASLSRQLTVEYDYVWFVPSGAVKDDLRHATLVALPVPGHGA
                     GEPIGILTRVDAMFSSGCQLMINAIRKSMPF"
     gene            1354..2697
                     /locus_tag="JNZ57_003574"
     CDS             1354..2697
                     /locus_tag="JNZ57_003574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HAY8829647.1"
                     /translation="MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVL
                     ENNPQLHEKMVNADELARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQA
                     GVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCR
                     QLLEEYEQQGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFP
                     GCHINHLTPRTLDIDRVQSMMPECGIEPKILIEGPPRREVPILLRQTSFKALEETVLF
                     AGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAGTGQDNLTHQMHLQETFRTFP
                     DSEFLMRQQGLAWFRYRLTPSGEAHRQAIHLGDDPQPLIERGWVVAQPITYEDFLPVS
                     AAGIFQSNLGNETQTRSHGNASREAFEQALGCPVLDEFQLYQEAEERSKRRCGLL"
     gene            2922..4577
                     /locus_tag="JNZ57_003575"
     CDS             2922..4577
                     /locus_tag="JNZ57_003575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucan biosynthesis protein"
                     /protein_id="HAY8829648.1"
                     /translation="MDRRRFIKGSMAMAAVCGTSGIASLFSQAAFAADSDIADGQTQR
                     FDFSILQSMAHDLAQTAWRGAPRPLPDTLATMTPQAYNSIQYDAEKSLWHNVENRQLD
                     AQFFHMGMGFRRRVRMFSVDPATHLAREIHFRPELFKYNDAGVDTKQLEGQSDLGFAG
                     FRVFKAPELARRDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFW
                     FDTVKPGATTFTVYALLDSASITGAYKFTIHCEKSQVIMDVENHLYARKDIKQLGIAP
                     MTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGEWICRPLNNPQKLQFNAYTDNNP
                     KGFGLLQLDRDFSHYQDIMGWYNKRPSLWLEPRNKWGKGTIGLMEIPTTGETLDNIVC
                     FWQPEKAVKAGDEFAFQYRLYWSAQPPVHCPLARVMATRTGMGGFPEGWAPGEHYPEK
                     WARRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYIEPIDGYRIQFDWYPTSD
                     STDPVDMRMYLRCQGDAISETWLYQYFPPASDKRQYVDDRVMS"
     gene            4717..4941
                     /locus_tag="JNZ57_003576"
     CDS             4717..4941
                     /locus_tag="JNZ57_003576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415943.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HAY8829649.1"
                     /translation="MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGFDGRGY
                     NAEVVRMKKQKLQLKDEMLKILQQESVKGV"
     gene            5004..5540
                     /gene="rimL"
                     /locus_tag="JNZ57_003577"
     CDS             5004..5540
                     /gene="rimL"
                     /locus_tag="JNZ57_003577"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12-serine
                     acetyltransferase"
                     /protein_id="HAY8829650.1"
                     /translation="MTETIKVSESLELHAVAESHVTPLYQLICKNKTWLQQSLNWPQF
                     VQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVISFNRIEPLNKTAEIGYWLDE
                     SHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQAE
                     FLNDAYDDVNLYARIIDS"
     gene            complement(5535..>5805)
                     /locus_tag="JNZ57_003578"
     CDS             complement(5535..>5805)
                     /locus_tag="JNZ57_003578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transferase"
                     /protein_id="HAY8829651.1"
                     /translation="AIVEGNCVLKHHVLIGGNAVVRGEPILLDEHVVIQGESRISGAV
                     IIENHVELTDHAVVEAFDGDTVHVRGPKVINGEERITRTPLAGLL"
BASE COUNT         1495 a         1382 c         1478 g         1450 t
ORIGIN      
        1 ataaggtgac gcaacagaat gcttctctgg tagaagaggc ctcagcggcg gcggtgtccc
       61 ttgaagaaca ggcggcacga ttaactgagg cggtggatgt attccgtctg aacaaacatt
      121 ctgtgtcggc agaacctcgc ggagcgggtg aaccagttag tttcgctacg gtgtgaaaat
      181 gttcaaggag ggatcgacag atcccttcac ctttcagaac ggcattgatt ttcgaatagc
      241 gttaatcatc aactggcaac cagaagagaa catcgcatct acgcgggtca gtattccaat
      301 cggttcgcct gcaccatgtc ccggaacagg cagggccacc agcgtggcat gacgcaggtc
      361 gtcttttacc gcgccagaag ggacaaacca cacgtagtcg tattcaaccg taagttgacg
      421 agatagcgaa gcagacagcg tttcgataca acccgaagga attttacatc cctggctctg
      481 tactaatgca tctgaatgct ggcgtggcgc agtgccttct ggtgatacaa cgaccggcca
      541 ttccagcact cggcttagcg ttacgttctc ctgaagtagc gggtgattag ggcggacaac
      601 cagcttcagc gattcaagaa acagcagttc gtaattaagc ccggtcatca gttcaggatc
      661 tgacatccga ccaatgccga tatcgatttc cccggttttc aaacccgcca gaatcatagg
      721 gttactcatt gtcgcaactt gcaaggtcgt ctctttttgt tgctgatgaa actgacctat
      781 aaccgaaggt aatatcccca gtgccgcagt aggtagtgca ccaatcctga cgacatcatt
      841 attaagacct tctttacgat gaagcgactg tccggcagtg ttgatggcgt caagaactct
      901 gactgcatgc gttaaaaatt gttcgccggg taaggtaagt tgcgccccct gacgaccacg
      961 ctcaaacaag cgagtgcccg tcagctgctc cagttcattc aatgtcttag agagcgcagg
     1021 ttgactcaaa ttaagggttt cagccgcgcg ccccaaagtt ccttgttgtg cgacagctac
     1081 gaatgtatga aggtggcgca aacggatgcg ctgactaaac agactatttt tttccataag
     1141 cgatgttaaa aacgaagcgg tgtcgctgac aagtgaagtt gtttgattat gataacttga
     1201 ttgcaaaata taattaacaa ttaaagcaat tgtgttacag caaaatggat aatattgatg
     1261 ttttcgcggc gagatcacag tttgtaaatt cttcccgcca gagtgaatgc ggttacctac
     1321 actccagatt actgaccact ggaggcagac actatggcga acagcatcac ggcggatgag
     1381 attcgggaac agttttcgca ggcaatgtca gccatgtacc agcaagaagt tccgcagtac
     1441 ggcacgctgc tggaactggt agctgatgtg aatctggctg tgctggaaaa caatcctcaa
     1501 ctgcacgaaa aaatggtaaa tgcagacgag ctggcgcgac tgaatgttga acgtcatggg
     1561 gcgattcgcg ttgggactgc acaagagctt gctactcttc ggcggatgtt tgccattatg
     1621 gggatgtacc cggtgagcta ttacgatctc tcgcaggcag gggtgccggt acattcgaca
     1681 gcatttcggc ccattgatga tgcttctctg gcgcgtaatc ccttccgcgt ttttacctcc
     1741 ttactccgcc ttgagcttat cgagaacgaa attttgcgcc agaaagcggc ggagattctg
     1801 cgtcagcgcg atatcttcac cccacgttgt cgacaactgt tagaggaata tgagcagcag
     1861 ggcggtttta acgaaacaca ggcacaggaa tttgtgcaag aggccctgga aacgtttcgc
     1921 tggcaccagt cagcaacggt agatgaagaa acctatcgcg ccttgcacaa cgaacatcgg
     1981 ttgattgctg atgtggtctg ttttcctgga tgccatatca accacctgac gccacgtacg
     2041 ctggatattg accgggtgca gtcgatgatg cctgaatgcg gaattgaacc caaaattctc
     2101 atcgaggggc cgccgcgccg cgaggtaccg attttactac gccagaccag ctttaaagca
     2161 ctggaagaga cggtgttgtt tgcggggcag aaacagggca cgcataccgc gcgctttggt
     2221 gaaattgagc agcgtggcgt ggcattaacg ccgaaagggc gacaactgta tgatgatctt
     2281 ctgcgtaacg ctggaaccgg gcaggataat ctcactcacc aaatgcattt acaggaaacc
     2341 ttccgcactt ttcctgacag tgagttttta atgcgtcagc aagggttggc atggttccgg
     2401 taccgtctga cgccttcggg tgaggcgcat cgtcaggcga ttcatcttgg agacgatcca
     2461 cagcctttaa ttgaacgtgg ttgggtagtg gcgcaaccca tcacctatga agatttcttg
     2521 cccgttagcg cggcggggat cttccagtca aatctgggta atgaaacgca gacacgcagt
     2581 cacggtaatg ccagtcgcga agcatttgag caggcgttgg gttgtccggt tttggatgag
     2641 ttccagcttt accaggaagc ggaagaacgc agtaaacgtc gctgtggttt gctttaaatt
     2701 ctgaccatcc gcctttgcaa aaatttgcct gattttacaa acgaatcagg ctcatcccat
     2761 cgacataaaa aaaatgccga tttatgcata ttctctcagt tcaacaattg gattattaat
     2821 aaatattgtc tagagtgagc ggtcataaat aagcactttc ttgccgctga aaacgaccag
     2881 cgcgggacca ttcacaacac cagaaggact cactttcagg tatggatcgt agacgattta
     2941 ttaaaggttc aatggctatg gccgccgtgt gcggtaccag cggcattgct tctctttttt
     3001 ctcaggcggc attcgcggca gattctgata ttgccgacgg gcaaacccag cgttttgact
     3061 tctccattct acagtcaatg gcgcacgact tagcgcaaac agcgtggcgt ggtgcgcctc
     3121 gtccgttacc tgacacgctg gcgacaatga cgccgcaggc ttataacagt attcaatacg
     3181 acgccgaaaa atcgctctgg cataacgttg agaaccgtca actggacgct cagttcttcc
     3241 atatgggaat gggattccgt cgccgcgttc gtatgttttc tgtagatcca gcaacacatc
     3301 tggcgcgtga aattcacttt cgcccggagt tgttcaaata caacgatgcg ggtgttgata
     3361 caaaacaatt agaagggcaa agcgatctcg gctttgccgg ttttcgcgtg tttaaagccc
     3421 ccgaactggc gcgccgtgat gtagtatcat ttctcggcgc gagttatttc cgcgccgttg
     3481 atgatacata tcaatacggt ttgtcggccc gcggcctggc gatcgacact tacaccgaca
     3541 gtaaagaaga gttccccgac tttaccgcct tctggtttga tacggtaaaa ccgggggcaa
     3601 ctacctttac cgtttatgcg ttgctcgata gcgccagcat tactggtgcc tataagttca
     3661 ctatccattg tgagaaaagt caggtgatta tggatgtgga aaatcacctg tatgcgcgca
     3721 aagacattaa acagctgggc attgcgccga tgaccagtat gttcagctgc ggtactaatg
     3781 aacgtcggat gtgcgataca attcatccgc aaattcatga ctctgatcgt ctgtccatgt
     3841 ggcggggcaa cggcgagtgg atttgccgtc cgctgaataa tccgcaaaaa ttgcagttca
     3901 atgcttacac cgacaacaac ccgaaagggt ttggtttatt gcaactggat cgtgacttct
     3961 cccattatca ggacattatg ggctggtata acaaacgccc aagtctgtgg ctggaaccgc
     4021 gtaacaagtg gggtaagggc accatcggcc tgatggaaat cccaacaacg ggcgaaacgc
     4081 tggataacat tgtctgtttc tggcagccag aaaaagctgt aaaagcaggt gatgagtttg
     4141 cattccagta tcgtctgtac tggagtgcgc aaccgcctgt tcattgccca ttagcgcgcg
     4201 ttatggcgac gcgtaccggc atgggcggtt tcccggaagg ttgggcgcca ggtgaacact
     4261 atcccgaaaa atgggcgcgt cgttttgccg tcgatttcgt tggtggtgat ctgaaagctg
     4321 ccgcgccaaa aggcattgag ccggtgatta cgctttccag tggggaagcg aagcaaatcg
     4381 aaattctcta tattgaaccc atcgatggtt atcgtattca gtttgactgg tatccgactt
     4441 cggactccac tgatccggtc gatatgcgga tgtatctacg ttgtcagggg gacgctatca
     4501 gtgaaacatg gctgtatcag tatttcccgc cagcgtcgga taaacgtcag tatgttgacg
     4561 accgcgtgat gagttaatcg ttttttcttc ggcaccttct tcgggaggtg ccgtctggtt
     4621 aaacacgatc ccgctcgcat ttttccctaa gttaaatgag taatctgatg gtgtgtattt
     4681 cagatacacc ttgtcagcca ctaacaggga gtgcgtatgt ttccagaata ccgagattta
     4741 atatcccgtc tgaaaaacga aaatcctcgc tttatgtcct tgttcgataa acacaataaa
     4801 cttgatcatg aaattgccag aaaggaaggt ttcgacggtc gagggtacaa tgcggaagtg
     4861 gtccgcatga aaaaacaaaa gctacagtta aaagatgaga tgctcaaaat cctgcagcag
     4921 gagagcgtca aaggggtgta aactttccta agccgccagc caggcggctt ttttaacaac
     4981 agcatggatt gactggagat aagatgactg aaacgataaa agtaagcgaa tcacttgaat
     5041 tacatgctgt tgcggaaagt cacgtcacac ctctttatca gttaatctgt aaaaataaaa
     5101 cctggttaca gcagtcgcta aactggccgc agttcgttca gagtgaagag gacacgcgaa
     5161 aaacggtgca gggtaatgtg atgttgcatc aacgcggcta tgccaaaatg ttcatgattt
     5221 tcaaagaaga tgaacttatc ggcgttatct cgtttaatcg tattgaacca ctgaataaaa
     5281 ctgctgaaat cggctactgg ctggacgaat ctcatcaggg gcaggggatc atttctcagg
     5341 cgctgcaggc attgattcat cattacgctc agtctggtga acttagacgc ttcgtgatca
     5401 aatgtcgggt ggacaatccg caaagcaacc aggtcgcttt gcgcaatggt tttatccttg
     5461 aaggttgcct gaaacaggct gagttcctga atgatgccta tgatgatgtg aacttatacg
     5521 cgcgtattat cgattcataa taaccctgcc agcggcgttc gcgtaatgcg ctcctcgccg
     5581 ttaatgactt ttggaccacg gacatgaacc gtgtcgccat caaaggcttc aacgacggcg
     5641 tggtcggtta actccacatg gttttcaatt atcaccgcac ctgaaatacg gctctcacct
     5701 tgtattacaa cgtgctcgtc gagcagaatc ggttcaccac gtaccacggc atttccgcca
     5761 atcaagacat gatgttttaa cacacaatta ccttccacaa tggca
//
LOCUS       DADMHC010000217         5772 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.220, whole genome shotgun sequence.
ACCESSION   DADMHC010000217 DADMHC010000000
VERSION     DADMHC010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5772)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5772)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5772
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.220"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..340
                     /locus_tag="JNZ57_003579"
     CDS             <1..340
                     /locus_tag="JNZ57_003579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001533668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4049 domain-containing protein"
                     /protein_id="HAY8829652.1"
                     /translation="PVELAEIINKKHHAVINGKKFKNSRAISCRSFNRYFSVSTDYRP
                     KLEALLACSQMLGINQVVAHNGNGGRECIGETGTVLGLNARDSKHAGRMFSMHNCQIN
                     PGAGPEITTP"
     gene            781..1848
                     /locus_tag="JNZ57_003580"
     CDS             781..1848
                     /locus_tag="JNZ57_003580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HAY8829653.1"
                     /translation="MDKSKRHLAWWVVGALAVAAVVAWWLLRPAGVPEGFAVSNGRIE
                     ATEVDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVA
                     AAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHMRSRSLAQRGAISAQQLDDDRAAA
                     ESARAALESAKAQVSASKAAIEAAHTNIIQAQTRVEAAQATERRIAADIDDSELKAPR
                     DGRVQYRVAEPGEVLAAGGRVLNMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAP
                     DLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGV
                     AWVRVNEELPWPDDLVVRLPQ"
     gene            1845..4580
                     /gene="rbbA"
                     /locus_tag="JNZ57_003581"
     CDS             1845..4580
                     /gene="rbbA"
                     /locus_tag="JNZ57_003581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated ATPase/putative transporter
                     RbbA"
                     /protein_id="HAY8829654.1"
                     /translation="MTHLELVPVPPVAQLAGVSQHYGKTVALNNITLDIPARCMVGLI
                     GPDGVGKSSLLSLISSARVIEQGNVMVLGGDMRDPKHRRDVCPRIAWMPQGLGKNLYH
                     TLSVYENVDFFARLFGHDKAEREVRINELLTSTGLAPFRDRPAGKLSGGMKQKLGLCC
                     ALIHDPELLILDEPTTGVDPLSRAQFWDLIDSIRQRQSNMSVLVATAYMEEAERFDWL
                     VAMNAGEVLATGSAEELRQQTQSATLEEAFINLLPQAQRQAHQAVVIPPYQPENAEIA
                     IEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAW
                     LFGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMS
                     ERFKLNDVEDVLPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLM
                     VDLSRQDKVTIFISTHFMNEAERCDRISLMHAGKVLASGTPQELVEKRGAASLEEAFI
                     AYLQEAAGQSNEAEAPPVVHDTTHAPRQGFSLRRLFSYSRREALELRRDPVRSTLALM
                     GTVILMLVMGYGISMDVENLRFAVLDRDQTVSSQAWTLNLSGSRYFIEQPPLTSYDEL
                     DRRMRAGDITVAIEIPPNFGRDIARGTPVELGVWIDGAMPSRAETVKGYVQAMHQSWL
                     QDVASRQSTPASQSGLMNIETRYRYNPDVKSLPAIVPAVIPLLLMMIPSMLSTLSVVR
                     EKELGSIINLYVTPTTRSEFLLGKQLPYIALGMLNFFLLCGLSVFVFGVPHKGSFLTL
                     TLAALLYIIIATGMGLLISTFMKSQIAAIFGTAIITLIPATQFSGMIDPVASLEGPGR
                     WIGEVYPTSHFLTIARGTFSKALDLTDLWQLFIPLLIAIPLVMGLSILLLKKQEG"
     gene            4580..5704
                     /locus_tag="JNZ57_003582"
     CDS             4580..5704
                     /locus_tag="JNZ57_003582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709253.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-2 transporter permease"
                     /protein_id="HAY8829655.1"
                     /translation="MRHLRNIFNLGIKELRSLLGDKAMLTLIVFSFTVSVYSSATVTP
                     GSLNLAPIAIADMDQSQLSNRIVNSFYRPWFLPPEMITADEMDAGLDAGRYTFAINIP
                     PNFQRDVLAGRQPDIQVNVDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVS
                     LETRMRFNPNLDPAWFGGVMAIINNITMLAIVLTGSALIREREHGTVEHLLVMPITPF
                     EIMMAKIWSMGLVVLVVSGLSLVLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIF
                     MGTIARSMPQLGLLVILVLLPLQMLSGGSTPRESMPQMVQDIMLTMPTTHFVSLAQAI
                     LYRGAGFEIVWPQFLTLMAIGGAFFTIALLRFRKTIGTMA"
BASE COUNT         1291 a         1480 c         1674 g         1327 t
ORIGIN      
        1 tccggtcgaa ttagcggaaa ttattaataa aaagcaccat gctgtaatta atggcaaaaa
       61 gtttaaaaat agccgggcta tctcttgtcg atcctttaat cgttattttt ctgtttcgac
      121 agattacaga cctaaacttg aagcactatt agcatgctca caaatgttag gtataaatca
      181 agttgttgca cataacggta atggtggaag agaatgtata ggtgaaacgg ggacagtttt
      241 aggtcttaac gcccgtgaca gtaaacatgc tggaagaatg ttcagcatgc ataattgcca
      301 aattaaccct ggtgcagggc ctgagataac cactccctag aagtcttacc agcatgaaaa
      361 aaacagaaat ggatttatgc ctttgattag aaggcgcaca atgttacagc tctgaaccat
      421 agacaacatg aatattaatg ttactatctg gttgagactg ttgataaaac gtaaaaagga
      481 atgctctgtt cctgcaactg aacaggcgtg aaacgcgatc caacaggatg gataccgttt
      541 tgtcagccag ttttatagat cacacttatg agtatgcgtg tttcatttac ggccaggaat
      601 gctgatgatg acaacattac tacccgtttt cactaagcct tccccgttgg cgctcaatgc
      661 tctgcgcgct ggtcgtattt gtcgtttcct tcttatcccg gatggaagaa tccgctgaac
      721 gtcgttcggc ggcagttgta acacgcgtcg tttgcttaca gggattatgg cgggccgatt
      781 atggataaga gtaagcgcca tctggcgtgg tgggttgtcg gggcactggc ggtggctgcc
      841 gtcgtggcgt ggtggctgtt gcgcccggcg ggtgtgccgg aaggctttgc tgtcagcaat
      901 gggcgcattg aagcgacgga agtggatatc gccagcaaaa ttgccgggcg tatcgacacc
      961 attctggtga aagaaggcca gtttgttcgc gaaggtgaag tgctggcgaa gatggatact
     1021 cgcgtgttgc aggaacagcg actggaagcc atcgcgcaaa tcaaagaggc acaaagcgcc
     1081 gttgccgccg cgcaggcttt gctggagcaa cgacaaagcg aaactcgcgc cgcgcagtcg
     1141 ctggttaatc aacgccaggc agaactggac tccgtagcaa aacgtcatat gcgttcccgt
     1201 tcactggccc aacgaggggc tatttctgcg caacagctgg atgacgaccg cgccgccgct
     1261 gagagcgccc gagctgcgct ggaatcggca aaagctcagg tttctgcttc taaagccgct
     1321 atagaggcgg cacataccaa tatcattcag gcgcaaaccc gcgtcgaagc ggcacaagcc
     1381 actgaacggc gcattgccgc agatatcgat gacagcgaac tgaaagcccc gcgtgacgga
     1441 cgcgtgcagt atcgggttgc cgagccaggg gaagtgctgg cggcaggcgg tcgggtgctg
     1501 aatatggtcg atctcagcga cgtctatatg actttcttcc tgccaaccga acaggcgggc
     1561 acgctaaaac tgggcggtga agcacggctg atcctcgatg ccgcgccaga tctgcgtatt
     1621 ccggcgacca tcagttttgt cgccagcgtc gcccagttca cgccaaaaac cgtcgaaacc
     1681 agcgatgaac ggctgaaact gatgttccgc gtcaaagcgc gtatcccacc ggaattactc
     1741 cagcagcatc tggaatatgt caaaacgggc ttgccgggcg tagcatgggt gcgggtgaat
     1801 gaagaacttc cgtggcctga cgacctggtg gtgaggttgc cgcaatgacg catctggaac
     1861 tggttcccgt cccgcctgtc gcgcaactgg cgggcgtgag ccagcattat ggaaaaaccg
     1921 ttgcgctgaa caatatcact ctcgatattc cggcccgctg tatggtcggg ctgattggcc
     1981 cggacggcgt cgggaagtcg agtttgttgt cgttgatttc cagtgctcgt gtcattgagc
     2041 agggcaatgt gatggtgctg ggcggcgata tgcgcgaccc gaagcatcgc cgcgacgtct
     2101 gcccgcgcat cgcctggatg ccgcaggggc tgggcaaaaa cctctaccac accttgtcgg
     2161 tgtatgaaaa cgtcgatttt ttcgcccgcc tgttcggtca cgacaaagcg gagcgggaag
     2221 tgcgaattaa tgagctgctg accagcacgg ggttagcacc gtttcgcgat cgtccggcag
     2281 ggaaactctc cggcgggatg aagcaaaaac ttgggctgtg ctgcgcgtta atccacgacc
     2341 cggaactgtt gatccttgat gagccaacaa cgggggttga cccgctctcc cgcgcccagt
     2401 tctgggatct gatcgacagt attcgccagc ggcagagcaa tatgagcgtg ctggtcgcca
     2461 ccgcctatat ggaagaggcc gaacgcttcg actggctggt agcgatgaat gccggagaag
     2521 tgctggcaac cggcagcgcc gaagagctgc ggcagcaaac gcaaagcgcc acgctggaag
     2581 aagcatttat taatctgtta ccgcaagcgc aacgccaggc gcatcaggcg gtagtgatcc
     2641 caccgtatca acctgaaaac gcagagattg ccatcgaagc gcgcgatctg accatgcgtt
     2701 ttggttcctt cgttgccgtt gatcacgtca atttccgcat tccacgcggg gagatttttg
     2761 gattccttgg ttcgaacggc tgcggtaaat ccaccaccat gaaaatgctt accggactgc
     2821 tgcccgccag cgaaggtgag gcgtggctat ttgggcaacc ggttgatcca aaagatatcg
     2881 atacccgccg tcgtgtgggc tatatgtcgc aggcgttttc gctctataac gaactcaccg
     2941 tgcggcaaaa cctggagtta catgcccgtt tgtttcacat cccggaagcg gaaattcccg
     3001 cgcgagtggc tgaaatgagc gagcgtttta agctcaacga cgttgaagat gttctgccgg
     3061 agtcattgcc gctcggcatt cgccagcggc tttcgctggc ggtggcggtg attcatcgcc
     3121 cggagatgtt aatcctcgat gagcctactt ctggtgtcga tccggtggcg agggatatgt
     3181 tctggcagtt gatggtcgat ctctcgcgcc aggacaaagt gactatcttc atctccaccc
     3241 actttatgaa cgaagcggaa cgttgcgacc gcatctcact gatgcacgcc ggaaaagtgc
     3301 ttgccagcgg tacaccgcag gaactggttg agaaacgcgg agccgccagt ctggaagagg
     3361 catttatcgc ctatttgcag gaagcggcag ggcagagcaa cgaagccgaa gcgccgcccg
     3421 tggtacacga caccacccac gcgccgcgtc agggatttag cctgcgccgt ctgtttagct
     3481 acagccgccg cgaagcgctg gaactgcgac gcgatccagt acgttcgacg ctggcgctga
     3541 tgggaacggt gatcctgatg ctggtaatgg gttacggcat cagtatggat gtggaaaacc
     3601 tgcgctttgc ggtgctcgac cgcgaccaga ccgtcagtag ccaggcgtgg acactcaacc
     3661 tctccggttc ccgttacttt atcgaacagc cgccgctcac cagttatgac gagcttgatc
     3721 gtcggatgcg tgcgggcgat atcacggtgg cgattgagat cccgcccaat ttcgggcgcg
     3781 atatcgcgcg tggtacgcct gtggaactcg gcgtctggat cgacggagcg atgcccagtc
     3841 gtgccgaaac ggtaaaaggt tacgtgcagg caatgcacca gagttggctt caggatgtgg
     3901 cgagccgaca atcgacaccc gccagccaaa gcgggctgat gaacattgag acgcgttatc
     3961 gctataaccc ggacgtaaaa agcctgccag caattgttcc ggcggtgatc ccgcttctgc
     4021 tgatgatgat cccgtcaatg ctaagcaccc ttagcgtggt gcgggaaaaa gagcttgggt
     4081 cgattatcaa cctttacgtg acccccacca cgcgtagtga atttttgctt ggtaaacagt
     4141 tgccatacat cgcgctgggg atgctgaact ttttcctgct ctgcggcctg tcggtgtttg
     4201 tgtttggcgt accgcataaa ggcagtttcc tgacgctcac cctggcggcg ctgctgtata
     4261 tcatcattgc caccggaatg gggctgctga tctccacctt tatgaaaagc cagattgccg
     4321 ccattttcgg aacggcgatt atcacgttga tcccggcgac acagttttcc gggatgatcg
     4381 atccggtagc ttcgctggaa gggcctggac gttggatcgg cgaggtttac ccgaccagtc
     4441 attttctgac tatcgcccgc gggacgttct cgaaagcgct ggatctgact gatttgtggc
     4501 aactttttat cccgttgctg atagccatcc cgctggtgat gggcttaagt atcctgctgc
     4561 tgaaaaaaca ggagggatga tgcgccattt acgcaatatt tttaatctgg gtatcaaaga
     4621 gttgcgcagt ctgctcggtg ataaagcgat gctgacgctg attgtcttct cgtttacggt
     4681 gtcggtgtat tcgtcagcga ccgttacgcc aggatcgttg aacctcgcgc cgatcgccat
     4741 tgccgatatg gatcaatcgc agttatcgaa ccggatcgtt aacagcttct atcgtccgtg
     4801 gtttttgcca ccggagatga tcaccgccga tgagatggat gccggactgg acgccggacg
     4861 ctataccttc gcgataaata ttccgcctaa ttttcagcgt gatgtcctcg ccggacgcca
     4921 gccggatatt caggtgaacg tcgatgccac gcgcatgagc caggcattta ccggcaatgg
     4981 gtatatccag aatattatca acggtgaagt gaacagcttt gtcgcgcgct accgtgataa
     5041 cagcgaaccg ttggtatcgc tggaaacccg gatgcgcttt aacccgaacc ttgatcccgc
     5101 gtggtttggc ggggtgatgg cgatcatcaa caacattacc atgctggcga ttgtattaac
     5161 cggatcggcg ctgatccgcg agcgtgaaca cggcacggtg gaacacttac tggtgatgcc
     5221 gataacgccg tttgagatca tgatggcgaa gatctggtcg atggggctgg tggtgctggt
     5281 ggtatcggga ttatcgctgg tgctgatggt gaaaggtgta ctgggcgtac cgattgaagg
     5341 ctcgatcccg ctgtttatgc tgggcgtggc gctcagtctg tttgccacca cgtcaatcgg
     5401 catttttatg gggacgatag cgcgttcaat gccgcaactg gggctgctgg tgattctggt
     5461 gctgctgccg ctgcaaatgc tttccggtgg atccacgccg cgcgaaagta tgccgcagat
     5521 ggtgcaggac attatgctga ccatgccgac gacacacttt gttagcctcg cgcaggccat
     5581 tctctaccgg ggtgccggat tcgaaatcgt ctggccgcag ttcctgacgc tgatggcaat
     5641 tggcggcgcg tttttcacca ttgcgctgct gcgattcagg aagacgattg ggacaatggc
     5701 gtaaggaagg gaaacttgac ttcatactgt gatgtcatac tattgatgtc ataaagtgaa
     5761 gtcataagga ca
//
LOCUS       DADMHC010000218         5755 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.221, whole genome shotgun sequence.
ACCESSION   DADMHC010000218 DADMHC010000000
VERSION     DADMHC010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5755)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5755)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5755
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.221"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(7..2109)
                     /locus_tag="JNZ57_003583"
     CDS             complement(7..2109)
                     /locus_tag="JNZ57_003583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HAY8829656.1"
                     /translation="MKIFSVRQTVLPALLVLSPVVFAADEQTMIVSAAPQVVSELDTP
                     AAVSVVDGEEMRLATPRINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIR
                     GIRLYVDGIPATMPDGQGQTSNINLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQ
                     QPPTIEASSYYGSFGSWRYGLKATGATGDGTQPGDVDYTVSTTRFTTHGYRDHSGAQK
                     NLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQALRAEQYDTRKTI
                     KQTQAGLRYERSLSAQDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQ
                     GIDSRWTHRGELGVPVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQKGELRRDERN
                     LMWNIDPYLQTQWQLSEKLSLDAGVRYSSVWFDSNDHYVTPGNGDDSGDASYHKWLPA
                     GSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGMNFGLKPSTNDTIEIGSKTR
                     IGDGLLSLALFQTDTDDEIVVDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNA
                     SWAWLDATYRSNVCNEQDCNGNRMPGIARNMGFASIGYVPEDGWYAGTEARYMGDIMA
                     DDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVDNLFDKEYVGSVIVNESNGRYYE
                     PSPGRNYGVGMNIAWRFE"
     gene            2351..3412
                     /locus_tag="JNZ57_003584"
     CDS             2351..3412
                     /locus_tag="JNZ57_003584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HAY8829657.1"
                     /translation="MHLRHLFSSRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAY
                     EMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQT
                     LWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI
                     GKESVIWVVDGENIKLKTAIQNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKI
                     LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLA
                     VLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQ
                     KSTKQQEATQPDDVIRIAL"
     gene            complement(3525..5024)
                     /gene="ansP"
                     /locus_tag="JNZ57_003585"
     CDS             complement(3525..5024)
                     /gene="ansP"
                     /locus_tag="JNZ57_003585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310084.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparagine permease"
                     /protein_id="HAY8829658.1"
                     /translation="MSKHDTDTSDQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAI
                     GTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFL
                     GEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWGAFGGVPQWVFALAALTIVGTMNM
                     IGVKWFAEMEFWFALIKVLAIVTFLVVGTVFLGSGQPLDGNTTGFHLITDNGGFFPHG
                     LLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLV
                     MLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMA
                     MGGSAPSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIAS
                     WAFIIVCQMRLRKAIKEGKAADVSFKLPGAPFTSWLTLLFLLSVLVLMAFDYPNGTYT
                     IAALPIIGILLVIGWFGVRKRVAEIHSTAPVVEEDEEKQEIVFKPETAS"
     gene            5291..>5755
                     /locus_tag="JNZ57_003586"
     CDS             5291..>5755
                     /locus_tag="JNZ57_003586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HAY8829659.1"
                     /translation="MIKVYGVPGWGSTISELMLTLADIPYQFVDVSGFDHEGTSRELL
                     KTLNPLCQIPTLALENDEIMTETAAIALMVLDRRPDLAPPVGRAERQQFQRLLVWLVA
                     NVYPTFTFADYPERWAPDAPEQLKKNVIEYRKSLYIWLNSQLTAEPYAFGEQL"
BASE COUNT         1518 a         1487 c         1380 g         1370 t
ORIGIN      
        1 aggtaattac tcaaatctcc acgcaatatt catgccgaca ccataatttc gtccgggcga
       61 aggttcgtaa tatcgcccgt ttgactcatt gacaatgaca gaaccaacgt attctttatc
      121 gaataaatta tcgacacgac caaataaatc cacagttaaa ttgtggtaat tgtatttata
      181 cccggtgaat aagccgacga gagtataaga cggcgctttt gccgtatttt catcatctgc
      241 cataatatcg cccatataac gcgcttccgt gcctgcatac caaccatctt ccggtacata
      301 acctatcgac gcaaagccca tattacgggc gatccctggc atccgattac cgttacaatc
      361 ctgttcattg caaacattgc tgcgataggt cgcatcaagc caggcccagg acgcgtttac
      421 gcgaaaatct cctgcgaaac gttgatccca tgccagttca gcgccttgac gacgggtctt
      481 tccggcattt ttgtaagtcg tacgcccacc gctactgcta tcgacaacaa tttcatcatc
      541 agtgtcggtc tgaaacaatg cgagactaag cagcccatca ccaatacgcg ttttactgcc
      601 gatctcaatt gtatcgttgg tggatggttt taaaccaaag ttcataccgc tttgcccatc
      661 agcacgataa gacagctcat taatcgtcgg cgtttcaaaa cctcgcccgg ctgccagata
      721 gatattccag gcatcggtca ttgcatattt taacgaaccg gcaggtagcc atttatgata
      781 actggcatca ccgctgtcat cgccgttacc cggagtaacg taatggtcgt tggaatcaaa
      841 ccacacggag ctgtagcgca cgccagcatc cagcgacagt ttttcgctca gctgccactg
      901 cgtctgtaaa tagggatcga tgttccacat cagattgcgt tcgtcgcgac gcaactcacc
      961 tttttgcccg tactccggca tgccgctatt caggcggaag ttattgtagc ccttgcggtt
     1021 ttcactcatg ttttcgtagt tcaggccggt agtgaacgtg accggaacgc ccagttcacc
     1081 acggtgtgtc cagcggctgt ctatcccctg gtaatggcgt tgcagggtaa tcacgccgcc
     1141 cgcatgtgac gggttaagtt gtggtgccat gggtattgac tggtactggg tcgtttctcg
     1201 ctctccggca tacatcatca cactcatatc atcttgcgcg ctcaggctac gctcatagcg
     1261 caacccagcc tgagtttgct tgatggtttt tcgcgtgtcg tactgttctg cacgaagcgc
     1321 ttgttgtgga ttagccttcc attctgcttt ggttagccca cctgggtcat ctgctttgat
     1381 atccacacta ttgaaaatca gacttaattt gctggcttca tcaatgcgta cgcccagttt
     1441 ggcattggct aaatttttct gtgcgccact atggtcacga tagccgtggg tcgtaaaacg
     1501 cgtggttgag acggtgtaat cgacatcgcc aggctgtgtg ccgtctcccg ttgcgcccgt
     1561 tgctttcagc ccatagcgcc agctgccaaa actgccgtag taactactgg cttcaatggt
     1621 tggtggctgt tgtccggtct gggtggtgac attcattacc ccaccagacg cgttgccata
     1681 cagggcagag aaggggccac gcagcacttc cacattttgc acactgctta aattgatgtt
     1741 ggatgtttgc ccttgcccgt cgggcatggt ggcgggaata ccgtccacat acaggcgaat
     1801 accgcgaata ccgtaagtgg agcgggagcc aaatccgcga atcgacagct gtaaatcttg
     1861 cgcatagttc tgccggtttt gtacctgcaa accaggcacg ccggtcagtg attcggacaa
     1921 gttaatgcgc ggtgttgcca ggcgcatctc ctcgccatcc accacgctta ctgctgctgg
     1981 ggtatccagt tctgaaacca cctgcggtgc ggcactgaca atcatagtct gttcatcagc
     2041 ggcaaaaaca acgggggaaa ggacaagcag tgcgggcaaa acggtctgtc ggacggaaaa
     2101 aatcttcatg aaaaaagcca ggttaagaat gggaaaacgc tgtcatggta ataaaattgt
     2161 aaacttatgg aaaacgaaac ggcacgatac gttaattaat tgagaaaatt gtagtcgtaa
     2221 cggcaagaaa tgctccacat ttgagaaaat aatgattacc attcccattt ataacaagag
     2281 cgtgacgatg attacgctta gcgaagcatt gtgaagcagc aaaaatattg gttcatcaaa
     2341 gggagtcgtc atgcatttac gtcatctgtt ttcatcgcgc ctgcgtggtt cattactgtt
     2401 aggttcattg cttgttgctt catcattcag tacgcaggcc gcagaagaaa tgctgcgtaa
     2461 agcggtaggt aaaggtgcct acgaaatggc ttatagccag caagaaaacg cgctgtggct
     2521 cgccacttcg caaagccgca aactggataa aggtggcgtg gtttatcgtc ttgatccggt
     2581 cactctggaa gtgacgcagg cgatccataa cgatctcaag ccgtttggtg ccaccatcaa
     2641 taacacgact cagacgttgt ggtttggtaa caccgtaaac agcgcggtca cggcgataga
     2701 tgccaaaacg ggcgaagtga aaggccgtct ggtgctggat gatcgtaagc gcacggaaga
     2761 ggtgcgcccg ctgcaaccgc gtgagctggt agctgatgat gccacgaaca ccgtttacat
     2821 cagtggtatt ggtaaagaga gcgtgatttg ggtcgttgat ggcgagaata tcaaactgaa
     2881 aaccgccatc cagaacaccg gtaaaatgag taccggtctg gcgcttgata gcaaaggcaa
     2941 acgtctttac accactaacg ctgacggcga attgattacc atcgacaccg ccgacaataa
     3001 aatcctcagc cgtaaaaagc tgctggatga cggcaaagag cacttcttta tcaacatcag
     3061 ccttgatacc gccaggcagc gtgcatttat caccgattct aaagcggcag aagtgttagt
     3121 ggtcgatacc cgtaatggca atattctggc gaaggttgcg gcaccggaat cactggctgt
     3181 gctgtttaac cccgcgcgta atgaagccta cgtaacgcat cgtcaggcag gtaaagtcag
     3241 tgtgattgac gcgaaaagct ataaagtggt gaaaacgttc gatacgccga ctcatccaaa
     3301 cagcctggcg ctgtctgccg atggcaaaac gctgtatgtc agtgtgaaac aaaaatccac
     3361 taaacagcag gaagctaccc agccagacga tgtgattcgt attgcgctgt aatagatatg
     3421 gcgagggtga aaacggtgag acttgcctgc cttttatcac ggcgtatccg gcactttcgt
     3481 cagtaatctg aatttgcccg gcacgtagcc gggcaatttt gcaattaact cgccgtttca
     3541 ggcttaaaca caatttcctg tttttcttca tcttcctcga cgactggcgc agtgctgtga
     3601 atttcagcaa cgcgtttgcg cacaccaaac cagcctataa ccagcagaat accgataatc
     3661 ggcagcgccg cgatagtata agtcccgttc gggtaatcga acgccatcag cacaaggaca
     3721 ctcagtaaaa acagtaatgt cagccaggaa gtgaagggcg cgccaggcag tttaaaactg
     3781 acatccgctg ctttgccttc tttaatcgct ttacgcaggc gcatctggca cacgatgata
     3841 aacgcccatg aagcgatgat tcccagcgac gcgaagttca acacaatctc aaatacgcgc
     3901 gacggcacca gatagttgag gaatacgccg acgacataca caaccagtgt cgctagaatc
     3961 ccggcatacg gcacatgctg acgactcatt ttcgccataa aactcggtgc ggaaccgccc
     4021 atcgccattg agcgcagaat acgtccggtg cagtacagac ctgagttcag gctggagagg
     4081 gcagcggtca gcaccacaat gttcataatg ctgccgatat atggcacacc cagtttagag
     4141 aaaaacgtca cgaacggact ttgccccgcc tgatacgcgc tccacggcaa taacataacc
     4201 agcaacacca cggagccgac gtaaaacagg ccaatacgcc aaatcacact gttaatggct
     4261 ttaggcacca tggtctgcgg atctttacat tctccggcag ctgtacccac catttcaatg
     4321 gaggcaaaag caaacactac gccctgaatc aacaccagcg caggcagcaa accgtggggg
     4381 aagaagccgc cattatcggt gattaaatga aagccagtgg tgttgccatc cagcggctga
     4441 ccactaccga ggaacactgt acccacgacc aaaaaggtca caatggcgag cactttaata
     4501 agcgcaaacc agaactccat ctccgcaaac catttcacac cgatcatatt catggtgcca
     4561 acgatggtaa gtgcagcgag cgcaaagacc cactgcggca cgccgccaaa cgcaccccag
     4621 taatgcatat acagagcgac ggcggtaata tcaacaatcc ccgtcatcgc ccagttgatg
     4681 aagtacatcc agccagcaac ataagcggct ttctcaccca aaaactcacg ggcataagag
     4741 acaaaactgc cactggaagg gcggtgtagc accagctcac ccaatgcacg cagaataaaa
     4801 aacgaaaaca agccacaaat taaataaacc agtgccagtg ctggacccgc catttgcagt
     4861 cgggctcctg cacctaaaaa caagccggtg ccaatcgcgc cgccaatggc gatcatctgt
     4921 acctggcgat tgcccatcgc tttgtgatac ccctcttcgt gggcattaag ccagcggcgt
     4981 ttcgcggcgt gttgatctga agtgtcggtg tcgtgtttac tcattgctct ccctgattgc
     5041 tttaatgaaa aagtcatata agttgccatg aacaatgttt atttatcctg gcgatgatag
     5101 ttatcaccat tattctttat gggtataaaa ctatcggcgc agcatcctac ccgttatcga
     5161 tatacgatgc aaaacatccc cttacaatcc tgaaggggat tcatacaact gacgaaaaaa
     5221 tgacaaatac ttttgctggt taacctgtgt actgtcctac acttaatcct taaaagattg
     5281 tgaggggcat atgattaagg tgtatggcgt acccggatgg ggctctacaa tcagtgagct
     5341 gatgctaaca ctggctgata ttccttatca gttcgttgat gtcagtggtt ttgaccacga
     5401 gggaacttca cgcgagttat tgaaaaccct gaacccgttg tgtcagattc cgacactggc
     5461 gctggaaaat gacgagatta tgacggagac agcggcgatt gcattgatgg ttctcgatcg
     5521 tcgcccggac cttgcgccac cggttgggcg cgccgaacgt cagcagtttc aacggctatt
     5581 ggtctggctg gttgctaatg tctatccaac attcactttc gccgattacc ctgagcgttg
     5641 ggctcctgac gcacctgaac agttaaagaa gaatgttatt gaatatcgta aatcgcttta
     5701 tatctggctg aattcacaat tgaccgctga accttatgcg tttggtgagc aacta
//
LOCUS       DADMHC010000219         5744 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.222, whole genome shotgun sequence.
ACCESSION   DADMHC010000219 DADMHC010000000
VERSION     DADMHC010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5744)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5744)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5744
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.222"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            320..1036
                     /locus_tag="JNZ57_003587"
     CDS             320..1036
                     /locus_tag="JNZ57_003587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HAY8829660.1"
                     /translation="MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELN
                     TSLKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSN
                     VNRTIANVRTIFNKKGGNIGAAGSVSYMFDNTGVIVFKGSDPDHIFEILLEAEVDVRD
                     VTEEEGNIVIYTEPTDLHKGIAALKAAGITEFSTTELEMIAQSEVELSPEDLEIFEGL
                     VDALEDDDDVQKVYHNVANL"
     gene            complement(1491..1566)
                     /locus_tag="JNZ57_003588"
     tRNA            complement(1491..1566)
                     /locus_tag="JNZ57_003588"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1531..1533),aa:Asn,seq:gtt)
     gene            complement(1667..3310)
                     /gene="yeeO"
                     /locus_tag="JNZ57_003589"
                     /pseudo
     CDS             complement(1667..3310)
                     /gene="yeeO"
                     /locus_tag="JNZ57_003589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416491.3"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="toxic metabolite efflux MATE transporter YeeO"
     gene            3315..3390
                     /locus_tag="JNZ57_003590"
     tRNA            3315..3390
                     /locus_tag="JNZ57_003590"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3348..3350,aa:Asn,seq:gtt)
     gene            3552..4814
                     /locus_tag="JNZ57_003591"
     CDS             3552..4814
                     /locus_tag="JNZ57_003591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000055676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HAY8829661.1"
                     /translation="MFLNDSKIRKLKPSSRPVKLSDAHGLYLLVNPGGSRIWYLKYRF
                     NGKESRVSLGAYPLVSLAEARQQRDGIRKLLAQNINPAQQRMAEKSACSPEKCFKAVA
                     LAWHKTNKKWSADYAARILASMENHIFPAVGHLPVAALKTQDFTALLRVIENKGFLEV
                     ASRTRQQLSNIMRYAVQQGLTDSNPAQHLEGVTASPVKNHYPALPLERLPELLDRIGD
                     YRQGRELTRLAVVLTLHLFIRSSELRFARWSEIDFRHKIWTIPATREAIDKVRFSGRG
                     AKIRTPHIVPLSRQAIAILKQIQELSGHLDLVFPGDHNPYKPMSENTTNRALRLMGYD
                     TKTEICGHGLRAMACSALVESDLWSRDTVERQMSHQERNSVRAAYVHKAEHLEARKAM
                     MQWWSDYLDVCREGYVAPYIYARQHEAA"
BASE COUNT         1697 a         1368 c         1231 g         1448 t
ORIGIN      
        1 aaatagatgt gaaggattaa gtaagacatc tggcaaatag cctgcaatca acgcgggctg
       61 tttgcttcct tgggcagatg cgagtttcat tatcgtctta atgatttccg catattaaaa
      121 gcatgtatgc tttcaaaata taattataaa aaatcccgcc aacaacatta gtttttataa
      181 aacaaaatat aagattatgg ctttagaata tttttatttc taatagacga gatttttcct
      241 gttatgatat aatatgctga tttaacacat gttaacgatt taccagtaat gtaaataaat
      301 tttcgaggag atcattccag tgggacgtaa atgggccaat attgttgcta aaaaaacggc
      361 taaagacggt gcaacgtcta aaatttatgc aaaattcggt gtagaaatct atgctgctgc
      421 taaacaaggt gaacccgatc cagaattaaa cacatcttta aaattcgtta ttgaacgtgc
      481 aaagcaggca caagttccaa agcacgttat tgataaagca attgataaag ccaaaggcgg
      541 cggagatgaa acgttcgtgc agggccgtta tgaaggcttt ggtcctaatg gctcaatgat
      601 tatcgccgag acattgactt caaatgttaa ccgtacgatt gctaacgttc gcacaatttt
      661 caataaaaaa ggcggcaata tcggagcggc aggttctgtc agctatatgt ttgacaatac
      721 gggtgtgatt gtatttaaag gatcagaccc tgaccatatt tttgaaattt tacttgaagc
      781 tgaagttgat gttcgtgatg tgactgaaga agaaggtaac attgttattt ataccgaacc
      841 tactgacctt cataaaggaa tcgcggctct aaaagcagct ggaatcactg agttctcaac
      901 aacagaatta gaaatgattg cgcaatctga agttgagctt tccccagaag atttagaaat
      961 ctttgaaggg cttgttgatg cccttgaaga tgacgacgat gtacaaaaag tttatcataa
     1021 cgtcgcaaat ctctaattat attttaaaga aatctgtctt tacggcagat ttctttaatc
     1081 tcatataacc cttataaaaa atataatgtt caactcgtca tattgattat aaaaaatccc
     1141 cgttcccaga gaaataatat ttattaaaat tccagttctt ctttttctga ttacagaagg
     1201 caaagtggca attacgcata gtttcccgat aaagacgcga tagcgacatc ccgcataagg
     1261 catttttctc tttatctttg tacggtactt catggaacag agtttttgac cttgcgaatc
     1321 gtgatgtctg ttgggggggc aacttgctca ctaaagcgtg agactcgatt aagcgcacga
     1381 aacacagaaa tcaaaaaaaa acggtcactt ttttacaagg taaccgggta aaaataattt
     1441 ttatttttta actgttttga gactcataga gatgtctcaa aactaaaatt tggctcctct
     1501 gactggactc gaaccagtga catacggatt aacagtccgc cgttctaccg actgaactac
     1561 agaggaatcg tgagaacgag gcgaatatta gcgatgccca cccacaatgt caaagcctgt
     1621 tttttaaatt tgaaatcgtt tgctgaaata atctgcattt tgtcgtttat tccgacacaa
     1681 ctggcttttt ttcacacttt tgcggctcgg gtcgagggta tttccatagc caacgtccag
     1741 taaccattcg ccagtaaaac agcacggccc gcacagccca gtcggcaaac attcccattc
     1801 agacaccaac cacaccccag ccaagcatga ttcccagcac ataaccgact acaacccgac
     1861 aaccccacat gctcaacatc gaaacccaca tggcgtaacg ggcatcacga gcacctttaa
     1921 atccagcggg tagcacccat gaggcggacc aaataggcat aaataaagca tttagccaaa
     1981 tcagaatcac aacgacatgt ttaacctgtg gatcctaggt gtaaaacgat gccataaccc
     2041 cggcaaaggg agccgttagc caggcgatgg ccgttaatcc aagagtggaa agccagaaca
     2101 catgccgcaa ctgaatctct gcttgcgcta tctgccctac ccccaacctt cggcctgtaa
     2161 tgatcgtaga agcagagccg agcgcacttc cgggtaagtt gataagagcc gcaattgaaa
     2221 acgcgataaa atttccggca ataacactgg tccccatccc ggcaacgaac atttgggtta
     2281 ataaccgacc actggtaaat aacactgatt cgacactcgc gggaatacca atccccatga
     2341 cttcccagat aatgctaaaa ttcagcggtt taaaatagct ctttaacgaa atccttagcg
     2401 caggattaaa accaatcgcc agcacccaca aaattgcaac tgcgccaata taacgagaaa
     2461 tggttaaacc cagccctgcc ccgacaaatc ccagtcccgg ccaagagaaa aggccgtaaa
     2521 tcaatatgcc gctaataata atattaagaa tattcaggct accgttaatc aatagcggta
     2581 ttttcgtatt ccctgcacca cgaagtgccc cgctaccaat aagagtgatg gcagctgctg
     2641 gataactgag taccgtcagc tccagataag tcaacgccag tgctttaact tctgtcgtgg
     2701 catcacccgc gacgaaatca ataatttgtt cgccaaaatg atgaataagc gttgccaaca
     2761 gtacggcaaa caacgtcatg atcaccaatg actgccgcgt cgccaccctc gctcgtcgtc
     2821 gatcccgctt accgagacta aatgccacaa cgacagtagt accaagatcg atagcagcaa
     2881 aaaaagccat aatgatcata ttgaagctgt ccgccaatcc cacgccggcc atcgcatctt
     2941 ttcccagcca gctgaccaga aaagtgctca gaacccccat caacaggaca caggcattct
     3001 ccatgaagat aggaacagca agtggggtta tctcgcgcca gaacaacact ttgtagctct
     3061 tgcgtttagc gtgccagcga gtgccgtgaa caacctggcg taaagcagag gagatattca
     3121 aagccgacct taattgcaga aagtgaaacc acatttcaaa taatgaggga gaatcagcaa
     3181 agctgcaaag attttcgcca acaaattgtc tgcaaatgca acaaactgtt gatagaaacg
     3241 gcaaacagtt ggggaattta aaaatcgggt ttgacaaaag atttttcgcc gttaagatgt
     3301 gcctcaacag cgattcctct gtagttcagt cggtagaacg gcggactgtt aatccgtatg
     3361 tcactggttc gagtccagtc agaggagcca aattcaagtt ttcatgctta tctgtacgtc
     3421 tctatttgtt tacgattcag taagttggcg tgaaaatcct tcccggtgcg tatctggttt
     3481 tctctccgca tcgggataat ttggtggtca gatctggggt cagtttggtt cgattctgga
     3541 gtgaccccca aatgttttta aacgattcta aaatccgcaa gttaaaacct tcttcccgtc
     3601 cggtaaaact ctccgacgct cacggtctgt atctgctcgt caatccgggc ggttcacgca
     3661 tctggtatct caaatatcgt ttcaacggaa aagaatccag agtcagtctt ggcgcatacc
     3721 cgctggtctc actggcagaa gccaggcaac agcgcgacgg tatccgcaag ctactggcgc
     3781 agaatatcaa cccggcgcaa cagcgcatgg cagagaaatc cgcctgctcc cctgaaaagt
     3841 gttttaaggc ggtggcgctg gcctggcaca aaaccaacaa aaaatggtcg gctgattatg
     3901 ccgcccgtat tctcgccagt atggaaaacc atatcttccc ggcggttggt cacctgcccg
     3961 ttgctgcgct taaaacgcag gatttcacgg ctttgttgcg ggttatcgag aataaaggct
     4021 ttctggaagt cgcgtcccga acccggcagc aactcagcaa catcatgcgc tatgccgttc
     4081 agcagggact taccgacagt aatccggcgc agcatctgga aggtgtaact gcctcccccg
     4141 tcaagaatca ctatcccgct ttaccgctgg agcgattgcc tgaactgctt gaccgcattg
     4201 gcgactaccg gcagggccgg gagttaaccc ggctggcggt ggtgctgacg ttgcacctgt
     4261 tcatccgttc cagcgaactg cgtttcgccc gctggagtga gattgatttc aggcacaaaa
     4321 tctggaccat ccccgcaacc cgcgaggcca ttgataaagt acggttttcg gggcgtggcg
     4381 caaaaatacg caccccgcat atcgtaccgc tctcccgcca ggcgattgcc attctgaaac
     4441 agatacagga gctttccggc catctggatc tggtgtttcc cggcgaccat aatccgtaca
     4501 agccaatgag cgaaaacacc accaaccggg cgctgcgtct gatggggtat gatacgaaaa
     4561 ctgaaatctg cgggcatgga ctcagggcaa tggcctgtag cgccctggtg gagtcggatc
     4621 tgtggtcacg cgatacagtg gagcggcaaa tgagccacca ggagcgcaac agcgtgcgtg
     4681 cggcatatgt gcataaggcg gagcatctgg aggcccgaaa ggccatgatg cagtggtggt
     4741 cggattatct ggatgtgtgc cgcgaggggt atgtcgcgcc gtacatttat gcgcggcagc
     4801 atgaggcagc ctgaatcaga aatagcgtaa atcattaaaa ctggaaaagc agatcctgat
     4861 tgaccgggat ctgctttttt ttgttgatag atattgccgt ttttttgtta ttatcaatcg
     4921 gaaaacatct ataaatattt ggccccaaat aattttgggt gaaaaccaat caatgaacta
     4981 cttatcgata ggtaagtacc agaaattatt ccagtagaat attttcaggc gattgcctat
     5041 taataaatac attattgata gataactacc ttctgtgatt tgcccgcaaa tcacagaaga
     5101 tgaaaagcta tcaatacgtg atattttcac ggaaatgcca attaatactc cagaatatct
     5161 cctgacccta tactctggga cctgtaagaa ctgcatcaga tattcagaga ccagacagat
     5221 ataagcctga aattattttg cttccaataa tttcaggaga aacctatcaa tgcatctgtt
     5281 ttcaacaggc agccaccttc cgtgattaac atgttaatca cggaaggtga aaagctatca
     5341 attatcgata tttccacgga attaccactt aatacttcca aaaaagtgcg caataaaata
     5401 ccgggcaatc tttcctgata cacattatca ctgcaccagc tatacagaga caaaataatc
     5461 tgcaccagcc cctgtaaatc ggttatctgc gccagcgtcc cgccgctcta cctgttcagg
     5521 actgcgccag ttcctggccc tttggttttc ggccctttca ggccaggcgc tgttaccctt
     5581 atcgccccct taacctttat gaccctttcc ctttctggcg caaccagttt attcggaaat
     5641 gtaccatgac agtctgcacc agattgtatt ttcaccacag gataacggtc acagagtgca
     5701 aaaaataaca tgaagcaccg aagattgtta atctatatgt agca
//
LOCUS       DADMHC010000220         5643 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.223, whole genome shotgun sequence.
ACCESSION   DADMHC010000220 DADMHC010000000
VERSION     DADMHC010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5643
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.223"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(72..809)
                     /gene="bamD"
                     /locus_tag="JNZ57_003592"
     CDS             complement(72..809)
                     /gene="bamD"
                     /locus_tag="JNZ57_003592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HAY8829662.1"
                     /translation="MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQ
                     DGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH
                     PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYT
                     TDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLM
                     ENAYRQMQMNAQAEKVAKIIAANSSNT"
     gene            944..1924
                     /gene="rluD"
                     /locus_tag="JNZ57_003593"
     CDS             944..1924
                     /gene="rluD"
                     /locus_tag="JNZ57_003593"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017383977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HAY8829663.1"
                     /translation="MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQR
                     VLVNGKVCDKPKEKVLGGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIVINKPRDL
                     VVHPGAGNLDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVE
                     SLQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHF
                     RVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDR
                     QALHATMLRLYHPISGIEMEWHAPIPEDMVELIEVMRADFEEHKDEVDWL"
     gene            1921..2652
                     /gene="pgeF"
                     /locus_tag="JNZ57_003594"
     CDS             1921..2652
                     /gene="pgeF"
                     /locus_tag="JNZ57_003594"
                     /EC_number="1.10.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase"
                     /protein_id="HAY8829664.1"
                     /translation="MSKLIVPQWPLPKGVAACSSTRIGGVSLPPYDSLNLGAHCGDNP
                     EHVEENRKQLFAAGNLPSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAV
                     MTADCLPVLFCNRAGTEVAAVHAGWRGLCAGVLEETVSCFADKPENILAWLGPAIGPR
                     AFEVGAEVREAFMAVDAKASAAFIQHGDKYLADIYQLARQRLANVGVEQIFGGDRCTY
                     TENETFFSYRRDKTTGRMASFIWLI"
     gene            2782..5355
                     /gene="clpB"
                     /locus_tag="JNZ57_003595"
     CDS             2782..5355
                     /gene="clpB"
                     /locus_tag="JNZ57_003595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002461515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HAY8829665.1"
                     /translation="MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGG
                     SVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRG
                     DNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA
                     LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF
                     IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ
                     KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID
                     LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD
                     KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPE
                     LEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL
                     HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD
                     SDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA
                     HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKEL
                     VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIYISDE
                     ALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV
                     Q"
BASE COUNT         1410 a         1344 c         1526 g         1363 t
ORIGIN      
        1 gatcggtcaa ctgatcctta actgatcggc attacagctc aagggctgcc gttttgtgtt
       61 tcaggtttct gttatgtatt gctgctgttt gcggcgatga ttttcgctac tttttcagct
      121 tgcgcattca tctgcatctg acggtatgca ttttccatca gtggcagcgc atcacgcgta
      181 gcctgggtat ccgggtagtc gcgcaacatg ccttctacgc ggttaacgac ggcaacccat
      241 gcaccacgtt ctgtatagta ctcggcaacg gagtattcat atttcgccag acgatctttc
      301 aggaatacca gacgtttggt tgcatcggta gtgtactgac tgttcggata gccgcgcacc
      361 agtttggaaa agtcactaaa cgcagctcgt gcatgttgag gatcgcgatc gctacggtca
      421 acgccaaaga acccttgcag cgcactgtca tccagcgcca tattggtcag gccacgcatg
      481 tacatgacat aatcgatatt cggatgggtc gggttaaggc gaataaaacg atcgatggca
      541 gcctgtgcta acggcaaatc ggcgttttta tagtaggcgt agatgagatc cagctgcacc
      601 tgctgcgaat acggaccaaa cggatagcga ttatctaatg cttccagttg cgttattgcc
      661 tgtctccagt taccgtcctg cagcttttgt tgtgcagtcg cgtaaatttc atttggtgga
      721 ttatcaggta cttcttcctt tgaccccgag caacccgcca aaaacaggct tagtgtggcg
      781 gctgccacca gatatttcat gcgcgtcatg acgttttgac tttcctcaaa atgtaatacg
      841 ggagattctc tgttcctgct cccggttaag accagctaca atagcacact atattaaacg
      901 gcaaagccgt aaaaccccaa cgataaacga agaagcagta tatatggcac aacgagtaca
      961 gctcactgca acggtgtccg aaaaccaact cggtcaacgc ttagatcagg ctttggccga
     1021 aatgttcccg gattattcac gttcgcgaat aaaagaatgg atcctcgacc agcgcgtgct
     1081 ggtaaacggc aaagtttgtg ataagccgaa agaaaaagta ttgggtggcg agcaggttgc
     1141 catcaacgct gagattgaag aagaagcgcg ttttgaaccg caggatatcc cgctggatat
     1201 tgtctatgaa gatgaagata tcatcgtcat taataaaccg cgcgacctgg tggtacatcc
     1261 tggcgcgggt aacctggatg gcacggtact gaatgcgttg cttcattatt atccgcccat
     1321 tgccgatgta ccgcgtgcgg gcatcgtcca tcgtctggat aaagacacca ctggcctgat
     1381 ggttgtggca aaaaccgttc cggctcagac gcgtttagtc gaatctttgc aaaggcgtga
     1441 aattactcgt gagtatgaag cggtggcaat tggtcatatg accgctggcg gtacagtaga
     1501 tgaaccaatc agccgccacc cgaccaaacg tactcacatg gcggtgcatc ccatgggcaa
     1561 accggcggtc actcactatc gcatcatgga acacttccgt gtgcacacgc gtctgcggtt
     1621 gcgtctggaa accggacgta cgcaccagat ccgcgtgcat atggcgcata ttacccatcc
     1681 gctggtgggc gatccggttt atggtggccg tccgcgtccg ccaaaaggtg cttcggaagc
     1741 gtttatctcc acgctgcgta agtttgaccg ccaggcgctt catgcaacta tgctgcgtct
     1801 ttatcacccg atctccggca tcgaaatgga atggcatgcg cctattccag aagatatggt
     1861 ggagttgatt gaggttatgc gcgccgattt cgaagagcat aaggatgaag tggactggtt
     1921 atgagtaagc tgattgtccc gcagtggccg ctgccaaaag gtgttgcggc ctgtagctct
     1981 acccgtatcg gcggcgtgag cttgccacct tacgactctc tcaaccttgg cgctcattgt
     2041 ggtgataacc cggagcacgt agaggagaat cgcaagcaac tttttgctgc gggaaatttg
     2101 ccttcaaaac cggtctggct tgagcaggta cacggcaaag atgtgcttaa gctcactggc
     2161 gaaccttatg cctcaaaacg ggcggatgcc tcttatagca atacgcccgg cacggtttgc
     2221 gcagtgatga ctgccgactg cctccctgtg ctgttttgca atcgagcggg aacggaagtc
     2281 gccgccgttc atgctggctg gcgtggactg tgcgcaggcg tgctggaaga gacggtttcc
     2341 tgttttgctg ataaacctga aaacattctc gcctggttag ggccggcaat tggtccacgc
     2401 gcgttcgaag tgggggcgga ggttcgcgag gcgtttatgg cagtagacgc taaagcaagt
     2461 gcagctttca ttcagcatgg tgataagtat ctggcggata tttatcagct tgcccggcag
     2521 cgtctggcga acgtgggtgt tgagcaaatt ttcggcggcg accgttgtac atatacggaa
     2581 aatgagactt tcttctctta tcgtcgcgac aagaccaccg gtcgtatggc aagtttcatt
     2641 tggctgatat aacctaaaga atcaagacga ttcggtacgc gtgattttct tttcacatta
     2701 atctggtcaa taaccttgaa taattgaggg atgacctcat ttaatctcca gtagcaactt
     2761 tgatccgtta tgggaggagt tatgcgtctc gatcgtctta ctaataaatt ccagcttgct
     2821 cttgccgatg cccaatcact tgcactcggg cacgacaacc aattcatcga accacttcat
     2881 ttaatgagcg ccctgctgaa tcaggaaggg ggttcggtta gtcctttatt aacatccgct
     2941 ggcataaatg ctggccagtt gcgcacagat atcaatcagg cattaaatcg tttaccgcag
     3001 gttgaaggta ctggtggtga tgtccagcca tcacaggatc tggtgcgcgt tcttaatctt
     3061 tgcgacaagc tggcgcaaaa acgaggtgat aactttatct cgtcagaact gttcgttctg
     3121 gcggcacttg agtctcgcgg cacgctggcc gacatcctga aagcagcagg ggcgaccacc
     3181 gccaacatta ctcaagcgat tgaacaaatg cgtggaggtg aaagcgtgaa cgatcaaggt
     3241 gctgaagacc aacgtcaggc tttgaaaaaa tataccatcg accttaccga acgagccgaa
     3301 cagggcaaac tcgatccggt gattggtcgt gatgaagaaa ttcgccgtac cattcaggtg
     3361 ctgcaacgtc gtactaaaaa taacccggta ctgattggtg aacccggcgt cggtaaaact
     3421 gccatcgttg aaggtctggc gcagcgtatt atcaacggcg aagtgccgga aggattgaaa
     3481 ggccgccgcg tactggcgct ggatatgggc gcgctggtgg ctggggcgaa atatcgcggt
     3541 gagtttgaag aacgtttaaa aggcgtgctt aacgatcttg ccaaacagga aggcaacgtc
     3601 atcctgttta tcgacgaatt acataccatg gtcggcgcgg gtaaagccga tggcgcaatg
     3661 gacgccggaa acatgctgaa accggcgctg gcgcgtggtg aattgcactg cgtaggtgcc
     3721 acgacgcttg acgaatatcg ccagtacatc gaaaaagatg ctgcgctgga acgtcgtttc
     3781 cagaaagtgt ttgttgccga gccttctgtt gaagatacca ttgcgattct gcgtggcctg
     3841 aaagaacgtt acgaattgca ccaccatgtg caaattactg acccggcaat tgttgcagca
     3901 gcgacgttgt ctcatcgcta cattgctgac cgtcagctgc cggataaagc catcgacctg
     3961 atcgatgaag cagcatccag cattcgtatg cagattgact caaaaccaga agaactcgac
     4021 cgactcgatc gtcgtatcat ccagctcaaa ctggaacaac aggcgttaat gaaagagtct
     4081 gatgaagcca gtaaaaaacg cctggatatg ctcaacgaag aactgagcga caaagaacgt
     4141 cagtactccg agttagaaga agagtggaaa gcagagaagg catcgctttc tggtacgcag
     4201 accattaaag cggaactgga acaggcgaaa atcgctattg aacaggctcg ccgtgtgggg
     4261 gacctggcgc ggatgtctga actgcaatac ggcaaaatcc cggaactgga aaagcaactg
     4321 gaagccgcaa cgcagctcga aggcaaaact atgcgtctgt tgcgtaataa agtgaccgac
     4381 gccgaaattg ctgaagtgct ggcgcgttgg acggggattc cggtttctcg catgatggaa
     4441 agcgagcgcg aaaaactgct gcgtatggag caagaactgc accatcgcgt cattggtcag
     4501 aacgaagcgg ttgatgcggt atctaacgct attcgccgta gccgtgcggg gttggcggat
     4561 ccaaatcgcc cgattggttc attcctgttc ctcggcccaa cgggtgtggg gaaaactgag
     4621 ctttgtaagg cgctggcgaa ctttatgttt gatagcgacg aggcgatggt ccgtatcgat
     4681 atgtccgagt ttatggagaa acactcggtg tctcgtctgg ttggtgcgcc tccgggatat
     4741 gtcggttatg aagaaggtgg ctacctgacc gaagctgtgc gtcgtcgtcc gtattccgtc
     4801 atcctgctgg atgaagtgga aaaagcgcat ccggatgtct tcaacattct gttgcaggta
     4861 ctggatgatg gtcgtctgac tgacgggcag gggagaacgg tcgacttccg taatacggtt
     4921 gtcattatga cctctaacct cggttccgat ttgattcagg aacgcttcgg tgaactggat
     4981 tatgcgcaca tgaaagagct ggtgctcggt gtggtaagcc ataacttccg tccggaattc
     5041 attaaccgta ttgatgaagt ggtggtcttc catccgctgg gtgaacagca cattgcctcg
     5101 attgcgcaga ttcagttgaa acgtctgtac aaacgtctgg aagaacgtgg ttatgaaatc
     5161 tacatttctg acgaggcgct gaaactgctg agcgagaacg gttacgatcc agtctatggt
     5221 gcacgtcctt tgaaacgtgc tatccagcag cagatcgaaa acccgctggc acagcaaata
     5281 ctgtctggtg aattggttcc gggtaaagtg attcgcctgg aagttaatga agaccggatt
     5341 gtcgctgtcc agtaatgata aaacgagccc ttcggggctc gtttttgtct ataagttaga
     5401 cggaaaagac tatatttaag atgttttgcc tgaaaaatga gcgaacgata aagtttttat
     5461 atttttcgct tgtcaggccg gaataactcc ctataatgcg ccaccactga cacggaacaa
     5521 cggcaaacac gccgccgggt cagcggggtt ctcctgagaa tctcaacaga gaaaagcaaa
     5581 aaaatgcttg actctgtagc gggaaagcgt attatgtaca ccccagagct gctgagaaaa
     5641 aaa
//
LOCUS       DADMHC010000221         5590 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.224, whole genome shotgun sequence.
ACCESSION   DADMHC010000221 DADMHC010000000
VERSION     DADMHC010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5590
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.224"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..66
                     /locus_tag="JNZ57_003596"
     CDS             <1..66
                     /locus_tag="JNZ57_003596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome modulation factor"
                     /protein_id="HAY8829666.1"
                     /translation="NQRSQWLGGWREAMADRVVMA"
     gene            complement(136..654)
                     /gene="fabA"
                     /locus_tag="JNZ57_003597"
     CDS             complement(136..654)
                     /gene="fabA"
                     /locus_tag="JNZ57_003597"
                     /EC_number="4.2.1.59"
                     /EC_number="5.3.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014915875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-hydroxydecanoyl-ACP
                     dehydratase/trans-2-decenoyl-ACP isomerase"
                     /protein_id="HAY8829667.1"
                     /translation="MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMT
                     ETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEG
                     KGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASD
                     LKVGLFQDTSAF"
     gene            complement(723..2483)
                     /locus_tag="JNZ57_003598"
     CDS             complement(723..2483)
                     /locus_tag="JNZ57_003598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lon protease family protein"
                     /protein_id="HAY8829668.1"
                     /translation="MTITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQF
                     ALEQLLHTRASSSFMLAKAPEESEYLNLIADAARTLQSDAGQLVGDHYEVSGHSIRLR
                     HAVSADDNFATLTQVVAADWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRT
                     LLAQPLLWMRLKNIVNRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQE
                     MEPELSEQAIYSEFEDTLQIVDAESVSQWCRWVTFTARHNHLPAPGADAWPVLIREAA
                     RYTGEQETLPLSPQWILRQCKEVASLCDGDTFSGEQLNLMLQQREWREGFLAERMQDE
                     ILQEQILIETEGERIGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFTDIERKAE
                     LGGNIHAKGMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISA
                     LADVPVNQSIAITGSVDQFGRAQPVGGLNEKIEGFFAICQQRELTGKQGVIIPTANVR
                     HLSLHSELVKAVEEGKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQERIAQASQ
                     QEGRHRFPWPLRWLNWFIPN"
     gene            2669..3121
                     /gene="matP"
                     /locus_tag="JNZ57_003599"
     CDS             2669..3121
                     /gene="matP"
                     /locus_tag="JNZ57_003599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ter protein MatP"
                     /protein_id="HAY8829669.1"
                     /translation="MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVL
                     LSLENEPVLVNGWIDKHMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQ
                     RLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKLDLQALLGKE"
     gene            complement(3197..4237)
                     /gene="ompA"
                     /locus_tag="JNZ57_003600"
     CDS             complement(3197..4237)
                     /gene="ompA"
                     /locus_tag="JNZ57_003600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpA"
                     /protein_id="HAY8829670.1"
                     /translation="MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGF
                     INNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGSVENGAYKAQGVQLTA
                     KLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRL
                     EYQWTNNIGDAHTIGTRPDNGMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLK
                     SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSER
                     RAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV
                     KGIKDVVTQPQA"
     gene            complement(4594..5103)
                     /gene="sulA"
                     /locus_tag="JNZ57_003601"
     CDS             complement(4594..5103)
                     /gene="sulA"
                     /locus_tag="JNZ57_003601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division inhibitor SulA"
                     /protein_id="HAY8829671.1"
                     /translation="MYTSGYAHRSSSFSSAASKIARVSTENTTAGLISEVVYREDQPM
                     MTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWVQASGLPLTKVMQISQLSPCHTVES
                     MVRALRTGNYSVVIGWLADDLTEEEHAELVDAANEGNAMGFIMRPVSASSHATRQLSG
                     LKIHSNLYH"
     gene            5322..>5590
                     /gene="sxy"
                     /locus_tag="JNZ57_003602"
     CDS             5322..>5590
                     /gene="sxy"
                     /locus_tag="JNZ57_003602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRP-S regulon transcriptional coactivator Sxy"
                     /protein_id="HAY8829672.1"
                     /translation="MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVS
                     DGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWR"
BASE COUNT         1450 a         1383 c         1374 g         1383 t
ORIGIN      
        1 aatcaaaggt cacaatggct gggaggctgg cgagaagcca tggcggacag ggtagtaatg
       61 gcctgattct gtctctttaa aaagaaacct ccgcattgcg gaggtttcgc cttttgatac
      121 tctgtctgat gataatcaga aggcagacgt atcctggaac agaccgactt tcaggtcgct
      181 ggcggtatag atcagacgac catcaaccag cacttcgcca tctgccagac ccataatcag
      241 acgacgatta acaatgcgtt taaagtgaat acggtaggtc acttttttcg ctgtcggcag
      301 tacctgacca gtgaatttca cttcgccaac gcccagcgcg cggcctttac cttcgccgcc
      361 cagccagccg aggtagaacc ctactagctg ccacattgcg tccaggccca ggcatcccgg
      421 cataaccgga tcgccaatga agtggcatcc gaagaaccac agatccggat tgatatccag
      481 ttctgcttca acataccctt tgtcgaagtt accacccgtt tcggtcattt tgaccacacg
      541 gtccatcatc agcatgttcg gtgctggcaa ttgcgggcct ttagcgccaa acagttcacc
      601 gcgaccagag gcaagaaggt cttcttttgt ataggattcg cgtttatcta ccatgttctc
      661 tgtaagcctt attttattga agcacgcagg atagctaaca cgtgtacgct gaacaagtcc
      721 gatcagttcg gaataaacca gttcagccaa cgtaatggcc atggaaaacg gtgacgtcct
      781 tcctgttgcg atgcttgcgc gatacgttcc tggatggttt gcatcagcgt cgtttggcct
      841 tcgccatccc acaccagatt taataataac ggcagtgcgt cagtcacatc gtctactgcc
      901 cagatggtga atttgccttc ttctaccgct ttcactagtt cactgtgaag acttaaatgg
      961 cgaacgttag ctgtggggat aatgacacct tgtttcccgg ttaactcacg ttgctggcaa
     1021 atagcaaaga agccttcgat tttctcattt aaaccaccga ccggctgggc gcgaccgaac
     1081 tgatcgactg aacctgtgat agcgatactc tgattcaccg gcacatcggc gagggcgctt
     1141 atcagggcgc agagttcagc catcgaggca ctatctccat caacttcact gtatgactgc
     1201 tcaaatgtca gcgatgctga gaaggggatc tgttgctcaa gctgtagttc cgacatcagg
     1261 aacgcttgca tgatcatcat ccctttcgca tggatattgc cgccaagttc cgctttgcgt
     1321 tcgatgtcgg tgaattcacc atcgccaata tgcacaacgc agctaatgcg agaaggttcg
     1381 ccaaaagcgc gtggatgacc cggaaattca atgaccgaaa gggcgttaat ttgcccgatg
     1441 cgttcgcctt cggtttcaat caggatttgc tcctgaagga tctcatcctg catacgttca
     1501 gcgaggaaac cttcgcgcca ttcacgctgc tgcagcatta agtttagctg ctcgccggag
     1561 aaggtgtcgc catcacacag ggaggcgacc tctttacact ggcggaggat ccactgcggg
     1621 ctaagcggaa gtgtttcttg ttcaccggtg tagcgtgctg cttcgcggat aagtaccggc
     1681 caggcatccg ctcccggggc aggtaagtga ttatgtctgg cggtaaatgt cacccagcga
     1741 caccactggc ttactgactc cgcatcgaca atctgcagag tatcttcaaa ttcgctataa
     1801 atagcctgct ctgaaagctc tggctccatc tcctggaaat cagccaatga ttcgcgttcg
     1861 cctaccagaa tgactttcag cttcaatggc atcgaaggca cagagacggg gagagggcgc
     1921 gactcatcaa acgcaaccca gtcaaaacgc tcgcggttaa cgatattttt cagccgcatc
     1981 cacagcagag gttgcgccag cagtgtacgc aaagagatga tgagaatacc gccatttgcc
     2041 tgatgcacca gaccaggctg cagggtaatg tcgccattaa actggcgcag gcagccaaag
     2101 agttgctccg cttctaccca gtcggcagcg acaacttgcg ttaaagtcgc aaaattatca
     2161 tctgcactca ctgcgtgacg taagcggatg gagtggccgg aaacctcata gtgatcgccc
     2221 accagttggc ctgcatcgct ttgtagcgta cgcgcggcat cggcaataag attcagatac
     2281 tcagactctt ccggggcctt agccagcata aaagaggagg atgctcgcgt atgcagcaac
     2341 tgctccagcg caaattgcag ccgcggttga gtatcactga ataaaggatc gttttcgtca
     2401 atcaaatgtg gctgagcaaa tatttcctga tagctatcgg tatcaggaac caggtcacgc
     2461 catgcaagtt tcgtaatggt caaagttgat gttttttagt ctgttgtcaa agccgcgatt
     2521 ataccgtaac cggcactaca gcacacgtag aaagcaccga caatactcct ggcatgggcg
     2581 ttaaagctca caggatggag attcttttct tcactggcct aaaaagctga tattctgtaa
     2641 agagttacac ggtaacattg agatcgctat gaaatatcaa caacttgaaa atcttgaaag
     2701 cggttggaaa tggaagtatc tggtgaagaa gcatcgcgaa ggggagttaa ttacccgtta
     2761 catagaagcc agtgccgccc aggaagccgt cgatgtgttg ctctcgctgg aaaatgaacc
     2821 cgtgctggta aatggctgga ttgacaagca tatgaatccg gaactggtca atcgcatgaa
     2881 gcaaaccatt cgtgccagac ggaagcgcca ttttaatgcg gaacaccagc atacgcgcaa
     2941 aaagtcgatc gatctggaat ttattgtctg gcaacgtctg gctggtcttg cgcagcgtcg
     3001 cggtaaaacg ctttctgaaa cgattgttca gctgattgaa gatgcggaaa acaaagagaa
     3061 atacgcgaat aaaatgtctt ctctgaagct ggatctgcag gcattgctgg gtaaggaata
     3121 actgacgaaa gtcagttcaa tttactaaag gcaaaaaaaa ccccgcagca gcggggtttt
     3181 tctaccagac gataacttaa gcctgcggct gagttacaac gtctttgata cctttaactt
     3241 cgatctctac gcgacgatcc ggagccaggc agtcgatcag tgcagcacgc tgtttcacgt
     3301 tgtcacaggt gttgccagta accgggttgg attcgcccat accacgtgcg gagatcttgt
     3361 ctgccgggat acctttggag atcaggtaat caacaacaga ctgagcacgg cgctcggaca
     3421 gaccctggtt gtaagcgtca gaaccgatgc ggtcggtgta acccagaaca actacggaac
     3481 cgtctttcgg atccaagttg ctcagctggc tgtacagctg atccagagca gcctgacctt
     3541 ccggtttcag ggttgctttg ttgaagttga acagaacgtc agacttcaga gtgaagtgct
     3601 tggtctgtac ttccggtgcc ggagctggag ccggagcaac tactggagct gcttcgccct
     3661 gaccgaaacg gtaggaaaca cccaggctca gcatgccgtt gtccggacga gtgccgatgg
     3721 tgtgtgcgtc accgatgttg ttggtccact ggtattccag acgggtagcg atttcaggag
     3781 tgatcgcgta ctcaacaccg ccagcgaaga ccggagaaac gccggtgtcg tggtttttac
     3841 cataaacgtt ggatttagtg tctgcacgcc ataccatacc acccagacga gtgtagatgt
     3901 ccaggtcgtc agtgattggg taacccagtt tagcggtcag ttgaacgccc tgagctttgt
     3961 atgcaccgtt ttcaacgctg cctttgtacg gcatacgacc taaccagtcg taacccattt
     4021 caaagccaac atacgggtta acctggtaac caccaaaagc accagcgccc agttggtttt
     4081 catgggtcgg gccattgttg ttgatgaaac cagtgtcatg gtactgggac cagcccagtt
     4141 tagcaccagt gtaccaggtg ttatctttcg gagcggcctg cgctacggta gcgaaaccag
     4201 ccagtgccac tgcaatcgcg atagctgtct ttttcatttt ttgcgcctcg ttatcatcca
     4261 aaatacgcca tgaatatctc caacgagata acacggttaa atccttcacc gggggatctg
     4321 ctcaatatta actctaccga tatcttcggc ttatgccgag cacccctggc gatgtaaagt
     4381 ctacaacgta gttgaaaact tacaagtgtg aactccgtta ggcatatgaa aaaaaagtct
     4441 tgtataaggt atgtttaatc ttttttgtca gcgacaattt acagaagaaa atcgcggaaa
     4501 ccgcttcaga caagcctccg caaggaaaat tagtcacgac tgaaagcatt ggctgggcga
     4561 caaaaaaagt tccaggatta atcctaaatt tacttaatga tacaaattag agtgaatttt
     4621 tagcccggaa agttgtctcg tggcgtgaga ggatgcgctt accggacgca taataaaccc
     4681 catagcgtta ccttcatttg ccgcatcaac aagttcagca tgctcttctt cagtcaaatc
     4741 atctgccaac caaccgatca ccacactgta attgcccgtg cgtaaagcgc gaaccattga
     4801 ctccacagtg tggcaagggg agagctggct aatctgcatt actttcgtta agggtagccc
     4861 agatgcctga acccattccc gactcagttt ttgttgcggt gttaaccaga gttgccagcg
     4921 cgattgctga ccgagttgct gtaacaatgg caacagtaga agttgcgtca tcatgggctg
     4981 atcttcgcga tagacaactt cactgataag cccggctgta gtgttttccg tagagacacg
     5041 cgcaatttta cttgctgcgg atgagaacga cgaagaacga tgtgcatagc ctgaagtgta
     5101 cataatcaat ccagcccctg taagctactg tatggatgta cagtacatcc agtgacaaca
     5161 aagatcaacc ctattttcgg aaagagcctc gcaaattttg tcgttggtga cgggaaaaca
     5221 taaattaatc ttgcccctta agaataagtt gcctattttc gtagttaacg gatccgttaa
     5281 tgtgaatcat tcttttatgt tatgatttta aaaggaattt tatgaaaagc ctctcctata
     5341 agcggatcta taaatcacaa gaatacctgg caacgttggg cacaattgaa taccgatcat
     5401 tgtttggcag ttacagcctg accgttgacg acacggtgtt tgcgatggtt tctgatggtg
     5461 agttgtatct tcgggcttgt gagcaaagtg cacagtactg tgtaaaacat ccgcctgtct
     5521 ggctgacata taaaaagtgt ggccgatccg ttaccctcaa ttactatcgg gttgatgaaa
     5581 gtctatggcg
//
LOCUS       DADMHC010000222         5572 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.225, whole genome shotgun sequence.
ACCESSION   DADMHC010000222 DADMHC010000000
VERSION     DADMHC010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5572)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5572)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5572
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.225"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            309..644
                     /locus_tag="JNZ57_003603"
     CDS             309..644
                     /locus_tag="JNZ57_003603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004856597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phnA family protein"
                     /protein_id="HAY8829673.1"
                     /translation="MSLPHCPKCNSEYTYEDNGMYICPECAYEWNDAEPAQESDELIV
                     KDANGNLLADGDSVTIIKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMK
                     LKSEFVKKN"
     gene            804..1247
                     /gene="yjdN"
                     /locus_tag="JNZ57_003604"
     CDS             804..1247
                     /gene="yjdN"
                     /locus_tag="JNZ57_003604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family metalloprotein YjdN"
                     /protein_id="HAY8829674.1"
                     /translation="MPLSPYLSFAGNCSDAIAYYQRTLGAELLYKISFGEMPKSAQDS
                     AENCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSGKASYSGFTLVLDSQQVEEGKRW
                     FDNLAANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVVKQQPTQ"
     gene            1380..2167
                     /gene="phnC"
                     /locus_tag="JNZ57_003605"
                     /pseudo
     CDS             1380..2167
                     /gene="phnC"
                     /locus_tag="JNZ57_003605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709835.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter ATP-binding protein"
     gene            2192..3208
                     /gene="phnD"
                     /locus_tag="JNZ57_003606"
     CDS             2192..3208
                     /gene="phnD"
                     /locus_tag="JNZ57_003606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8829675.1"
                     /translation="MNAKIIASLAFTSMFSLSTLLSPAHAEEQEKALNFGIISTESQQ
                     NLKPQWTPFLQDMEKKLGVKVNAFFAPDYAGIIQGMRFNKVDIAWYGNLSAMEAVDRA
                     NGQVFAQTVAADGSPGYWSVLIVNKDSPINNLNDLLAKRKDLTFGNGDPNSTSGFLVP
                     GYYVFAKNNISASDFKRTVNAGHETNALAVANKQVDVATNNTENLDKLKTSAPEKLKE
                     LKVIWKSPLIPGDPIVWRKNLSETTKDKIYDFFMNYGKTPEEKAVLERLGWAPFRASS
                     DLQLVPIRQLALFKEMQGVKSNKGLNEQDKLAKTTEIQAQLDDLDRLNNALSAMSSVS
                     KAVQ"
     gene            3334..4113
                     /gene="phnE"
                     /locus_tag="JNZ57_003607"
     CDS             3334..4113
                     /gene="phnE"
                     /locus_tag="JNZ57_003607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313113.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
                     /protein_id="HAY8829676.1"
                     /translation="MQTITIAPPKRSWFSLLSCAVVLAVLVVSWQGAEMAPLTLIKDG
                     GNMATFVADFFPPDFSQWQDYLTEMAVTLQIAVWGTALAVVLSIPFGLMSAENLVPWW
                     VYQPVRRLMDACRAINEMVFAMLFVVAVGLGPFAGVLALFIHTTGVLSKLLSEAVEAI
                     EPGPVEGIRATGANKLEEILYGVLPQVMPLLISYSLYRFESNVRSATVVGMVGAGGIG
                     VTLWEAIRGFQFQQTCALMVLIIVTVSLLDFLSQRLRKHFI"
     gene            4134..4859
                     /gene="phnF"
                     /locus_tag="JNZ57_003608"
     CDS             4134..4859
                     /gene="phnF"
                     /locus_tag="JNZ57_003608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism transcriptional regulator
                     PhnF"
                     /protein_id="HAY8829677.1"
                     /translation="MHLSTHPTSYPTRYQEIAAKLEQELRQHYRCGDYLPAEQQLAAR
                     FEVNRHTLRRAIDQLVEKGWVQRRQGVGVLVLMRPFDYPLNAQARFSQNLLDQGSHPT
                     SEKLLSVLRPASGHVADALGITEGENVIHLRTLRRVNGIALCLIDHYFADLTLWPTLQ
                     RFDSGSLHDFLREQTGIALRRSQTRISARRAQAKECQRLEIPNMSPLLCVRTLNHRDG
                     ESSPAEYSVSLTRADMIEFTMEH"
     gene            4860..5312
                     /gene="phnG"
                     /locus_tag="JNZ57_003609"
     CDS             4860..5312
                     /gene="phnG"
                     /locus_tag="JNZ57_003609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnG"
                     /protein_id="HAY8829678.1"
                     /translation="MHADIATRQHWMSVLAHSQPAELAARLNALNITANYEVIRTAET
                     GLVQIQARMGGTGERFFAGDATLTRAAVRLTDGTLGYSWVLGRDKQHAERCALIDALM
                     QQSRHFQNLSETLIAPLDADRMARIAARQAEVNASRVDFFTMVRGDNA"
     gene            5309..>5572
                     /gene="phnH"
                     /locus_tag="JNZ57_003610"
     CDS             5309..>5572
                     /gene="phnH"
                     /locus_tag="JNZ57_003610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-phosphorus lyase subunit PhnH"
                     /protein_id="HAY8829679.1"
                     /translation="MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPL
                     NIATTSVLLTLADNDTPVWLSAPLSNDIVSQSLRFHTNAPLVNQ"
BASE COUNT         1313 a         1641 c         1459 g         1159 t
ORIGIN      
        1 aattttatat ttagtgtgtt gttttttatc agaataaata acgtcttctg atgcgtttaa
       61 aacgtcagaa agataaaaat atcatgtgaa taaaaaaaag aacaagtaga gcattaacat
      121 tatcttaaat aataaataga ggcaaaaaga ttattttctt tttgcgtttc ctttcaaatg
      181 aaaacgatcg tcgtctaaaa tcagcagtac ccccgacaaa ctcagggatt ttgtgtataa
      241 ttgcggcctt tttcggcaat ctgccgtttt ttggcgcttt tgccctgctg acttttgagg
      301 aaatccacat gtcattacca cactgcccaa aatgcaactc cgaatacact tacgaagata
      361 acggcatgta catctgcccg gaatgtgcct acgaatggaa cgacgcagaa cctgcacagg
      421 aaagcgacga gctgatcgtt aaagatgcta acggcaatct gctggctgac ggcgacagcg
      481 ttaccatcat taaagatctg aaggtgaaag gtagctcttc gatgctgaaa attggcacca
      541 aagtgaaaaa catccgcctg gttgaaggcg accataacat cgattgcaaa atcgacggtt
      601 ttggtccgat gaaactgaaa tctgagtttg tgaaaaagaa ctgattgtat tgtgatcggt
      661 aagccggata aggcgctcgc gccacatccg gcaacgatgc cgactgcctg atgcgacgct
      721 gaccgcgcct tatcaggctt ccctctcatc tgtataaatt tcgaactaca cttaactggc
      781 ttctcttaac tgaggtcacc atcatgccgt taagtcccta cctctctttt gccggtaact
      841 gttccgacgc gattgcctat tatcaacgta cgttgggcgc ggaactgctc tataaaatca
      901 gcttcggcga aatgccaaaa tcagcgcagg acagcgccga gaactgccct tccggaatgc
      961 aatttcccga taccgccatc gcccacgcca acgtgcgcat tgccggaagc gacatcatga
     1021 tgagcgatgc tataccgtca ggaaaagcca gctactccgg ctttacgctg gtgctcgatt
     1081 cgcaacaggt cgaagaagga aaacgctggt ttgataacct tgccgctaac ggaaaaattg
     1141 aaatggcctg gcaggaaact ttctgggcgc atggcttcgg caaagtcacc gataaatttg
     1201 gcgtaccgtg gatgattaat gtcgtcaaac aacaaccaac gcaataaccc gccgggaggc
     1261 ccgccctccc gcactgtcat cgaattcccg ttaactcttc atctgttagt cacttttaat
     1321 taaccaaatc gtcacaataa tccgccacga tggagccact tttttaggga ggctgcatca
     1381 tgcaaacgat tatccgtgtc gagaagctcg ccaaaacctt caatcagcat caagcgctgc
     1441 atgcggttga tctgaacatt catcacagtg aaatggtggc tctgcttggg ccgtcgggtt
     1501 ccggcaaatc cacactttta cgtcacttaa gcggtttgat taccggcgat aaatccgccg
     1561 gcagccatat cgagctgctg ggccgacagt ccagcgcgaa ggccgtctgg cgcgcgatat
     1621 ccgcaaaagc cgcgcccata ccggctacat cttccaacaa ttcaacctgg tgaatcgcct
     1681 gagcgtactg gagaacgtgc tgattggcgc gctcggcagc acgccgttct ggcgcacctg
     1741 ttttagctgg ttcacccgcg agcagaaaca acgcgcgtta caggcgctga cccgcgttgg
     1801 catggtgcat tttgcccatc aacgcgtttc caccctctcc ggcggacagc agcagcgtgt
     1861 ggcgattgcc cgcgcgctga tgcagcaggc gaaggtgatt ctggccgatg aacccatcgc
     1921 ctcgctggac ccggaatccg cccgcatcgt gatggacacc ctgcgcgaca tcaatcagaa
     1981 cgacggcatc accgtagtcg tcacgctgca tcaggtggat tacgccctgc gctactgcga
     2041 acgcatcgtc gccctgcgcc aggggcacgt tttctacgac ggcagcagcc aacagtttga
     2101 taacgaacgt tttgaccatc tctaccgcag cattaatcgc atcgaagaga acgcgaaagc
     2161 tgcctgacat ccccatcatt gaggaaaacg aatgaacgct aagataattg cctcgctggc
     2221 cttcaccagc atgttcagcc tcagcaccct gttaagcccg gcacacgccg aagagcagga
     2281 aaaggcgctg aatttcggca ttatttcaac ggaatcacag caaaacctga aaccgcaatg
     2341 gacgccattc ttacaggata tggagaagaa gctgggcgtg aaggtgaacg ccttctttgc
     2401 cccagactac gcaggcatta tccagggaat gcgcttcaat aaagtggata tcgcctggta
     2461 cggcaacctg tcggcaatgg aagcggtgga tcgcgccaac ggccaggtct tcgcccagac
     2521 ggtcgcggcg gatggatcgc caggttactg gagcgtgttg atcgtcaaca aagatagtcc
     2581 gatcaacaac ctgaacgatc tgctggcgaa gcggaaagat ctcaccttcg gcaatggcga
     2641 tcctaactcc acctctggct tcctcgtccc cggttactac gtctttgcca aaaacaatat
     2701 ctccgccagc gactttaagc gcaccgtcaa cgctgggcat gaaaccaacg cgctggccgt
     2761 cgccaacaag caggtggatg ttgccaccaa caacaccgaa aacctcgaca agctgaaaac
     2821 ctccgcgcca gagaagctga aagaactgaa ggtgatctgg aagtcgccgc tgatcccagg
     2881 cgatccgatc gtctggcgca agaatctctc cgaaaccacc aaagacaaga tctacgactt
     2941 ctttatgaac tacggaaaaa cgccggaaga gaaagcggtg ctggaacgcc tgggctgggc
     3001 cccgttccgc gcctccagcg acctgcaact ggtgccgatt cgccagctcg cactgtttaa
     3061 agagatgcag ggcgtaaaaa gcaataaagg actgaatgag caggacaagc tggcgaaaac
     3121 caccgagatt caggcgcagc tggatgacct ggaccgcctg aacaacgcgt taagcgcgat
     3181 gagttcggtg agtaaagcgg tgcagtaatg tgctcgatcg gtcccctatc ccttgaggga
     3241 gagggttagg gtgaggggga aatgcgcacg ctgatgccct catcccggcc ctctcccaca
     3301 gggagaggga gaaaacatta aacggagcca aacatgcaaa ccatcaccat cgccccaccc
     3361 aagcgtagct ggttctcgct tctgagctgt gccgttgttc tcgccgtgct ggtcgtctcg
     3421 tggcagggcg cggaaatggc cccgcttacg ctgattaaag acggcggcaa catggcaacc
     3481 ttcgttgccg acttcttccc gcccgatttc agccagtggc aggattacct caccgaaatg
     3541 gccgtcacgc tgcaaatcgc cgtctggggc accgcgctgg cagtggttct ctccatcccc
     3601 ttcggtctga tgagcgccga aaacctggtg ccgtggtggg tttaccagcc cgttcgccgc
     3661 ctgatggatg cctgccgcgc cattaacgaa atggtcttcg ccatgctgtt cgtggtcgcc
     3721 gtcggtctcg gcccgttcgc tggcgtgctg gcgctattta tccacaccac cggcgtgctc
     3781 tccaagctgc tttccgaagc ggtggaagcg atcgaacccg gcccggtaga aggcattcgc
     3841 gccaccggcg ccaacaagct ggaagagatc ctttacggcg tgctgccaca ggtaatgccg
     3901 ctgctgatct cctactccct ctatcgcttc gaatccaacg tccgctcggc gaccgtcgtc
     3961 ggcatggtcg gtgcaggcgg gatcggcgtc accctgtggg aagcgattcg cggttttcag
     4021 ttccaacaaa cctgcgccct gatggtgctt atcatcgtca cggtcagcct gctggatttc
     4081 ctctctcaac ggttgcgtaa gcactttatc tgataagcga ggcattgata tctatgcact
     4141 tgtctacaca tccgaccagc tacccaacac gctatcagga gatagccgca aaacttgagc
     4201 aggagcttcg tcaacactat cgctgcggcg actatcttcc cgccgagcag cagctggcgg
     4261 cgcgctttga ggtaaatcgc cacaccctgc gccgcgccat cgaccaactg gtggaaaaag
     4321 gctgggtaca gcgccgtcag ggcgtcggcg tgctggtgct gatgcgcccg ttcgattacc
     4381 cgctcaacgc ccaggcgcgt tttagccaga acctgctgga tcagggcagc catcccacca
     4441 gcgaaaaact gctgtcggtg ctgcgcccgg catctggtca cgtcgctgac gcgctgggga
     4501 taaccgaggg ggagaacgtc atccacctgc gcaccctgcg ccgggtcaac ggcatcgcgc
     4561 tctgtttaat cgaccactac tttgcggacc tcaccctttg gccgacgctg caacgcttcg
     4621 acagcggctc gctgcacgat tttctgcgcg agcaaaccgg gattgcgctg cgccgcagcc
     4681 agacgcggat cagcgcccgc cgcgcccagg ccaaagagtg ccagcgtctt gaaatcccga
     4741 atatgtcgcc gctgctgtgc gtgcgcaccc ttaaccaccg tgacggtgaa agcagcccgg
     4801 cggagtactc cgtcagcctg acgcgcgccg acatgattga attcactatg gagcactgaa
     4861 tgcacgcaga tatcgcgacc cgccagcact ggatgtccgt gctggcgcac agccaaccgg
     4921 ctgaactggc agcccgcctg aacgcgctga acatcaccgc caactatgaa gtgatccgca
     4981 ccgccgaaac cggcctggta cagattcagg cgcgaatggg cggtaccggc gaacgctttt
     5041 ttgccggcga cgccacgctg acccgcgccg ccgtacgcct gactgacggc accctcggct
     5101 acagctgggt gctggggcgc gacaaacagc acgccgaacg ctgcgcgctg attgacgcgt
     5161 tgatgcagca atctcgccat tttcaaaact tatcagaaac ccttattgcc ccactggacg
     5221 ctgaccgtat ggcacgcatt gccgcacgcc aggccgaagt gaacgccagc cgggtcgact
     5281 tctttacgat ggttcgcgga gacaacgcat gaccctggaa accgctttta tgcttcctgt
     5341 gcaggatgcc cagcacagtt ttcgtcgcct gttaaaggcc atgagcgagc cgggcgtgat
     5401 tgtcgccctg catcagctca aacgcggctg gcagccgctg aatatcgcca ccaccagcgt
     5461 gctgctgacg ctggctgata acgacacgcc ggtgtggctt tccgcgccat taagtaacga
     5521 tatcgtcagc cagagcctgc gttttcatac caacgcgccg ctggtcaatc ag
//
LOCUS       DADMHC010000223         5544 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.226, whole genome shotgun sequence.
ACCESSION   DADMHC010000223 DADMHC010000000
VERSION     DADMHC010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5544)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5544)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5544
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.226"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            157..1731
                     /gene="nikA"
                     /locus_tag="JNZ57_003611"
     CDS             157..1731
                     /gene="nikA"
                     /locus_tag="JNZ57_003611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter, nickel/metallophore
                     periplasmic binding protein"
                     /protein_id="HAY8829680.1"
                     /translation="MLSTLHRTLFALLACASFIVHAAAPDEITTAWPVNVGPLNPHLY
                     TPNQMFAQSMVYEPLVKYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVKLSNGEPFD
                     AEAAAENFRAVLDNRQRHAWLELANQIVDVKALSKTELQITLKSAYYPFLQELALPRP
                     FRFIAPSQFKNHETMNGIKAPIGTGPWILQESKLNQYDVFVRNENYWGEKPAIKKITF
                     NVIPDPTTRAVAFETGDIDLLYGNEGLLPLDTFARFSQNPAYHTQLSQPIETVMLALN
                     TAKTPTNELAVREALNYAVNKKSLIDNALYGTQQVADTLFAPSVPYANLGLKPRQYDP
                     QKAKALLEKAGWTLPAGKDIREKNGQPLRIELSFIGTDALSKSMAEIIQADMRQIGAD
                     VSLIGEEESSIYARQRDGRFGMIFHRTWGAPYDPHAFLSSMRVPSHADFQAQQGLADK
                     PLIDKEIGEVLATHDETQRQALYRDILTRLHDEAVYLPISYISMMVVSKPELGNIPYA
                     PIATEIPFEQIKPVKP"
     gene            1731..2675
                     /gene="nikB"
                     /locus_tag="JNZ57_003612"
     CDS             1731..2675
                     /gene="nikB"
                     /locus_tag="JNZ57_003612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter permease subunit NikB"
                     /protein_id="HAY8829681.1"
                     /translation="MLRYVLRRFLLLIPMVLAASVIIFLMLRLGTGDPALDYLRLSNL
                     PPTPEMLASTRTMLGLDQPLYVQYGTWLWKALHLDFGISFASQRPVLDDMLNFLPATL
                     ELAGAALVLILLTSVPLGIWAARHRDRLPDFAVRFIAFLGVSMPNFWLAFLLVMAFSV
                     YLQWLPAMGYGGWQHIILPAVSIAFMSLAINARLLRASMLDVAGQRHVTWARLRGLND
                     KQTERRHILRNASLPMITAVGMHIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPV
                     IQCFTLMMVVVFVVCNLIVDLLNAALDPRIRRHEGAHA"
     gene            2672..3505
                     /gene="nikC"
                     /locus_tag="JNZ57_003613"
     CDS             2672..3505
                     /gene="nikC"
                     /locus_tag="JNZ57_003613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter permease subunit NikC"
                     /protein_id="HAY8829682.1"
                     /translation="MNFFLSSRWSVRLALIIIALLALIALTSQWWLPYDPQAIDLPSR
                     LLSPDAQHWLGTDHLGRDIFSRLMAATRVSLGSVMACLLLVLTLGLVIGGSAGLIGGR
                     VDQATMRVADMFMTFPTSILSFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISL
                     RQREFVLASRLSGAGHVRVFVDHLAGAVIPSLLVLATLDIGHMMLHVSGMSFLGLGVT
                     APTAEWGVMINDARQYIWTQPLQMFWPGLALFISVMAFNLVGDALRDHLDPHLVTEHA
                     H"
     gene            3505..4269
                     /gene="nikD"
                     /locus_tag="JNZ57_003614"
     CDS             3505..4269
                     /gene="nikD"
                     /locus_tag="JNZ57_003614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel import ATP-binding protein NikD"
                     /protein_id="HAY8829683.1"
                     /translation="MPQQIELRNIALQAAQPLVHGVSLTLQRGRVLALVGGSGSGKSL
                     TCAATLGILPAGVRQTAGEILADGKAVYPCALRGIKIATIMQNPRSAFNPLHTMHTHA
                     RETCLALGKPADDATLTAAIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESP
                     FIIADEPTTDLDVVAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSQGK
                     IVEQGDVETLFNAPKHTVTRSLVSAHLALYGMELVS"
     gene            4266..5072
                     /gene="nikE"
                     /locus_tag="JNZ57_003615"
     CDS             4266..5072
                     /gene="nikE"
                     /locus_tag="JNZ57_003615"
                     /EC_number="7.2.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel import ATP-binding protein NikE"
                     /protein_id="HAY8829684.1"
                     /translation="MTLLNVSGLSHHYAHGGFSGKHQHQAVLNNVSLTLKSGETVALL
                     GRSGCGKSTLARLLVGLESPSQGNISWRGESLAKLNRAQRKAFRRDIQMVFQDSISAV
                     NPRKTVREILREPMRHLLSLKKSEQLARASEMLKAVDLDDSVLDKRPPQLSGGQLQRV
                     CLARALAVEPKLLILDETVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERF
                     CQRVMVMDNGQIVETQAVGDKLTFSSDAGRVLQNAVLPAFPVRRRATEKV"
     gene            5078..5479
                     /gene="nikR"
                     /locus_tag="JNZ57_003616"
     CDS             5078..5479
                     /gene="nikR"
                     /locus_tag="JNZ57_003616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-responsive transcriptional regulator
                     NikR"
                     /protein_id="HAY8829685.1"
                     /translation="MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA
                     TQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLK
                     GDMGDVQHFADDVIAQRGVRHGHLQCLPKED"
BASE COUNT         1174 a         1590 c         1521 g         1259 t
ORIGIN      
        1 tacgctcacc gccgacagtg tgcaatggat cgattcagtt aactgatccg cccacccgac
       61 tgcccatcta ttgatccaga acaggtaata agtatgacga atacttaaaa tcgtcatact
      121 tatttccgcc atctatttta atccattggg gttatcatgc tctccacact ccaccgcact
      181 ctatttgcgc tgctggcttg tgcgtctttt atcgtccatg ccgctgcacc agatgaaatc
      241 actaccgcct ggccggtgaa tgtcgggcca ctaaacccgc acctttacac gcctaaccag
      301 atgttcgccc agagcatggt ttatgaacca ttggtgaaat atcaggcaga cggttcggtg
      361 atcccgtggc tggcaaaaag ctggactcat tcagaagatg gtaaaacctg gaccttcacc
      421 ctgcgtgatg acgtgaaatt atccaacggt gaaccgttcg atgccgaggc ggcggcagaa
      481 aacttccgcg cagtgctcga taaccgtcaa cgtcacgcct ggctggagct ggcaaaccag
      541 attgttgatg ttaaagcact cagtaaaaca gagctgcaaa ttaccctgaa aagcgcctac
      601 tatcctttcc tgcaagaact ggccctgccc cgtcctttcc gttttatcgc tccctcgcag
      661 tttaaaaacc atgaaaccat gaacggaatt aaagcgccga ttggcaccgg accgtggatt
      721 ttgcaggaat cgaaactgaa tcagtacgat gtcttcgtcc gtaacgaaaa ctactggggc
      781 gaaaagccag cgattaaaaa gatcaccttt aacgtcatcc cggacccgac tacccgcgcg
      841 gtggcgtttg aaactggcga tatcgacctg ctgtacggaa acgaagggtt attaccgctc
      901 gataccttcg cccgctttag ccagaacccg gcttaccata cccaactgtc acagccgatc
      961 gaaaccgtga tgctggcgct taataccgcc aaaaccccca ccaatgagct ggcagtacgt
     1021 gaagctctta attacgcggt aaacaaaaaa tcgctgattg ataacgcgtt gtatggcacc
     1081 cagcaggtcg ccgacaccct gtttgcccct tctgtgccct acgccaacct cggcctgaaa
     1141 ccgcgccagt acgatccgca gaaagcgaaa gcgttgctgg aaaaagccgg ttggacgctg
     1201 cctgcgggca aagacatccg cgagaaaaat ggtcagccgc tgcgcattga actgtcgttc
     1261 atcggcaccg atgcgttaag caaatcgatg gcggaaatca ttcaggctga tatgcgccag
     1321 attggcgcag atgtctcgct gattggcgaa gaagagagca gtatctatgc tcgtcagcgc
     1381 gacggtcgtt ttggcatgat tttccaccgc acctggggcg cgccatacga tccacacgcc
     1441 ttcctgagtt caatgcgcgt accgtcgcac gctgacttcc aggcacagca aggattagcc
     1501 gacaaaccgc tgattgataa agagatcggc gaagtgctgg cgacccatga cgaaacgcaa
     1561 cgtcaggcgc tgtatcgcga cattctgacc cgtctgcatg acgaggcggt ttatctgcct
     1621 atcagttaca tctcaatgat ggtggtatca aaaccggagc tgggtaacat cccctacgcg
     1681 ccgatcgcca ccgaaattcc gttcgaacag attaaaccgg tgaaacctta atgttgcgtt
     1741 acgtattacg ccgctttctg ctgctgatcc cgatggtgct cgccgcctcg gtgatcattt
     1801 ttctgatgct gcgcctcggt accggcgacc cggcgctcga ttatttgcgt ctgtctaacc
     1861 tgccgccgac gccggagatg ctggcctcta cccgcaccat gctcggactg gatcagccgc
     1921 tgtacgtcca gtacggcacc tggttgtgga aggcgctgca tcttgacttt ggtatctcat
     1981 tcgccagcca acgcccggtg ctggacgata tgctgaactt cctgcccgcc acgctggaac
     2041 ttgcaggtgc ggcgctggta ttaattctgc tcacttccgt accgctcggt atctgggcgg
     2101 cgcgccaccg cgatcgtttg ccggatttcg ccgtgcgctt tatcgcgttt cttggcgtgt
     2161 cgatgcccaa cttctggctg gcatttttgc tagtgatggc gttttcggtg tatctgcaat
     2221 ggctacccgc gatgggctac ggcggctggc agcacatcat tttgcctgcg gtttccatcg
     2281 cctttatgtc gctggcgatt aacgcgcgac tgctgcgcgc cagtatgctg gacgtcgccg
     2341 gtcagcgtca cgtcacctgg gcgcggctac gcggcctgaa tgacaaacag accgaacgcc
     2401 gccatattct gcgcaatgcc tcgctgccga tgatcaccgc cgtggggatg cacattggcg
     2461 aattgattgg cgggacgatg attatcgaaa acatctttgc ctggcctggc gtcgggcgct
     2521 atgcggtgtc ggcgattttt aaccgtgact atccggtgat tcagtgcttt acgctgatga
     2581 tggtggtggt ttttgtggtc tgtaatttga ttgtcgattt gctcaacgcc gcgctggacc
     2641 cgcgcattcg tcgtcatgaa ggagcgcacg cgtgaacttt ttcctctctt cccgctggtc
     2701 ggtacgcctg gcgctgatca ttatcgccct gctggcgctg attgcgctca ccagccagtg
     2761 gtggctgccg tatgaccccc aggcgattga tttgccgtcg cgcctgcttt cgccggatgc
     2821 gcagcactgg ctgggcaccg atcacttagg tcgcgatatt ttctcgcggc tgatggcagc
     2881 gacccgcgtg tcgctcggtt cggtaatggc ctgcctgctg ctggtgctga cattagggct
     2941 ggttattggc ggcagcgccg ggttgattgg cgggcgcgtt gatcaggcca ccatgcgcgt
     3001 cgccgatatg tttatgacct tcccgacctc gattctgtcg ttctttatgg ttggcgtgct
     3061 cggcaccggg ctgaccaacg taattatcgc catcgccctg tcgcactggg cgtggtatgc
     3121 acgcatggtg cgcagcctgg tgatttcact acgccaacgc gagtttgtgc tggcgtcacg
     3181 gctttccggt gcgggccatg tgcgagtgtt tgtcgatcat ctggcaggcg cggtgatccc
     3241 ttcgctgctg gtgctggcaa cgctggatat cggccatatg atgctgcacg tctcggggat
     3301 gtctttcctt ggcctcggtg tgaccgcgcc gaccgccgaa tggggcgtga tgattaacga
     3361 cgcgcgccag tatatctgga cccagccgct gcaaatgttc tggccggggc tggcgctgtt
     3421 tatcagcgtg atggccttta acctggtggg tgacgcactg cgcgatcatc tggaccctca
     3481 tctggtgacg gagcacgcac actaatgccg caacagattg aactacgtaa tatcgcgcta
     3541 caggccgcgc agccgctggt acacggtgta tcgttaaccc tgcaacgcgg gcgcgtgctg
     3601 gcgttagtcg gcggtagcgg cagcgggaaa tcattaacct gcgccgcgac gctgggcatt
     3661 ttgcccgctg gcgttcgcca gacggcgggg gaaattttag ccgatggcaa agcggtttat
     3721 ccctgcgccc tgcgcggcat caaaattgcc accatcatgc agaacccgcg cagcgccttt
     3781 aatccgctac acaccatgca cacccacgcg cgggaaacct gcctggcgtt agggaaaccc
     3841 gccgatgacg ctacgcttac cgctgccata gaagcggtgg ggctggaaaa cgccgcgcgc
     3901 gtgctgaagc tgtacccgtt cgagatgagc ggcggcatgt tgcagcgcat gatgattgcg
     3961 atggcggtgc tgtgtgaatc accgtttatc atcgcagatg aaccgaccac cgacctcgac
     4021 gtggtagcac aggcgcgcat cctcgatctg ctggaaagca ttatgcaaaa acaagcgccg
     4081 ggaatgctgc tggtcaccca tgatatgggc gttgtggcgc gtctggcgga tgacgtggcg
     4141 gtgatgtcac aaggtaaaat tgtcgaacag ggcgatgtag aaacgctgtt taacgccccc
     4201 aaacatacgg tgacgcgcag cctggtttcc gctcatctcg ccctctacgg tatggagctg
     4261 gtatcatgac cttacttaac gtcagcggcc tttcccatca ctatgcccac ggtggattta
     4321 gcggaaaaca tcaacatcag gcggtgctga ataacgtttc cctgaccctg aaaagcggcg
     4381 aaaccgtcgc cctgctggga cgcagcggct gcggaaaaag caccctcgcg cggctgctgg
     4441 taggcttaga gtctccctca caagggaata ttagctggcg cggcgaatcg ctggcgaaac
     4501 ttaatcgcgc ccaacgtaaa gccttccgcc gtgatattca gatggtgttt caggactcca
     4561 tcagtgccgt gaatccgcgc aaaaccgtgc gcgagatcct gcgtgaaccg atgcgccacc
     4621 tgctatcact gaaaaaatcc gaacaactgg cgcgcgccag cgaaatgctg aaggcggtcg
     4681 atctcgatga cagcgttctc gacaaacgcc caccgcagtt aagcggcggc cagctccagc
     4741 gcgtctgcct agcacgcgcg ctggcggtcg aaccgaaatt gctgattctg gatgaaaccg
     4801 tttctaacct tgatctcgtg ttacaggcgg gcgtcattcg cctgctgaaa aagctgcaac
     4861 aacagtttgg caccgcctgc ctgttcatca cccacgactt acgtcttgta gaacgctttt
     4921 gccagcgggt gatggtgatg gacaacggac aaatcgtcga aacccaggcg gtgggagata
     4981 aattaacctt ttcctctgac gccggacgtg tgctacaaaa cgcggtatta cccgcattcc
     5041 ccgtgcgccg tcgcgccaca gaaaaggttt aacgcaaatg caacgagtca ccatcacgct
     5101 tgatgacgat ttactggaga cgctggacag cctgagccag cgtcgtggtt ataacaaccg
     5161 ttccgaagct atccgcgata ttctgcgtag cgccctggcc caggaggcca ctcagcagca
     5221 cggcacgcaa ggtttcgcgg tgctctccta tgtgtatgaa cacgaaaaac gcgacttagc
     5281 cagccgcatt gtctccaccc agcaccatca ccacgatctc tccgtcgcca cgctgcatgt
     5341 gcatatcaat cacgacgact gtctggaaat cgccgtgctg aaaggtgata tgggcgacgt
     5401 gcagcatttt gccgatgacg ttatcgccca gcgcggcgtg cggcatgggc atttgcagtg
     5461 cttgccgaag gaagattgag ttatttctga aacgaggaaa gaaaagatat taactgaact
     5521 taatttataa aattaagttc agtt
//
LOCUS       DADMHC010000224         5514 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.227, whole genome shotgun sequence.
ACCESSION   DADMHC010000224 DADMHC010000000
VERSION     DADMHC010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5514
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.227"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..1046)
                     /locus_tag="JNZ57_003617"
     CDS             complement(<1..1046)
                     /locus_tag="JNZ57_003617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708400.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein"
                     /protein_id="HAY8829686.1"
                     /translation="MREINMLRNISSCLFPHISTITSPNHYLSEWDDWEKQGLPEEQR
                     TEAVRRLRACLTSKGHKLDLRALALSSLPVLPACIKKLDVSCNKLTILTDLPENIKEL
                     IARDNFLTHISALPHYLITLDVSENQLENLPLLPDTIKSLSAEYNRLSTLPSLPLNLK
                     KLEVRNNELQTLPSLPSNLKILKVAHNHLTELPPLPRRLQLLFAYSNRLSNLPNIQEN
                     IIMRRFFYFENNQITTIPTNLFRLDPHITIEIANNPLSDQTLLFLIQQTSVPNFNGPQ
                     FRISLSDQNRLFLRQMLPQNLHSRHIRVITEGGQNFQIPPLPETVAAWFPEADRREVS
                     TQWTSFSTEENSRA"
     gene            1537..1647
                     /locus_tag="JNZ57_003618"
     CDS             1537..1647
                     /locus_tag="JNZ57_003618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001344347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA invertase"
                     /protein_id="HAY8829687.1"
                     /translation="MLIGYVRVSTNDQNTDLRRNALNCAGYELIVERMGA"
     gene            1927..2922
                     /gene="pgl"
                     /locus_tag="JNZ57_003619"
     CDS             1927..2922
                     /gene="pgl"
                     /locus_tag="JNZ57_003619"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HAY8829688.1"
                     /translation="MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVS
                     PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYN
                     AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG
                     HLVAQDPAEVTTIEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTL
                     DIMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ
                     PRGFNVDHSGKYLIAAGQKSHLISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH"
     gene            complement(2963..3916)
                     /locus_tag="JNZ57_003620"
     CDS             complement(2963..3916)
                     /locus_tag="JNZ57_003620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308823.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8829689.1"
                     /translation="MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEED
                     LHIQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPT
                     AVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFT
                     PLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLD
                     WFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKD
                     AVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG"
     gene            4100..5152
                     /locus_tag="JNZ57_003621"
     CDS             4100..5152
                     /locus_tag="JNZ57_003621"
                     /EC_number="5.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalomesaconate tautomerase"
                     /protein_id="HAY8829690.1"
                     /translation="MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGND
                     LEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGA
                     FAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVA
                     LTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELD
                     ADKALLACIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRA
                     LAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRAS
                     VIRTTRKIFSGEVYLP"
     gene            5228..>5514
                     /locus_tag="JNZ57_003622"
     CDS             5228..>5514
                     /locus_tag="JNZ57_003622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829691.1"
                     /translation="MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIV
                     GLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSA"
BASE COUNT         1452 a         1139 c         1322 g         1601 t
ORIGIN      
        1 aatgcccggg aattctcctc ggtggaaaaa gaagtccatt gtgtagaaac ctcccgacga
       61 tctgcttcag gaaaccaggc tgccacagtt tcgggaagag gggggatctg aaagttctgc
      121 cccccttcag tgatgactct gatatggcgc gaatgtaaat tttgcggcaa catctggcgt
      181 aaaaacagtc tgttttggtc tgacagggaa atacgaaact gaggcccgtt aaaatttgga
      241 accgaagttt gctgtattaa gaatagcaga gtttgatctg ataaggggtt atttgcaatc
      301 tcaatagtta tatgaggatc taaacgaaaa agatttgtcg ggattgtagt tatttggttg
      361 ttttcaaaat aaaaaaatct tctcatgata atattttctt ggatgtttgg taagttgctt
      421 aatctattgc tatatgcaaa aagaagttgc agtctcctag gtaaaggggg cagttcagta
      481 agatggttgt gcgcaacctt aagtatctta agattagaag gcagagatgg aagagtttgc
      541 agttcgttgt tcctaacctc aagttttttt aaattcaagg gtaatgaagg cagtgtggat
      601 aacctattat actctgcgct tagtgatttg atggtgtctg gtaataacgg cagattctct
      661 aattgatttt cggacacatc caaagttatt agataatgtg gtaatgcaga tatatgtgtt
      721 aagaaattat ctcttgcaat aagttcttta atattttcag gtagatcagt aaggatggtt
      781 aatttattac agctcacatc aagcttttta atgcaagcag ggagtacagg taacgaggaa
      841 agcgccaagg ctcgcaggtc cagtttatgc cccttagagg taagacatgc acgaagtctt
      901 cttaccgcct cagtacgctg ttcttccggt aacccctgtt tctcccaatc atcccattcg
      961 gacaaataat ggttggggga tgtaattgtg ctgatatgtg gaaataaaca ggatgaaata
     1021 tttctgagca tattaatttc tcgcatatgg atatggaatt agattgtgaa taaattgtat
     1081 ttaatgtatc tctcctaatg aggagggtgt ttcagaatat tcgccataag ggaatgagtg
     1141 ttatatcatg ctttctatcc tggtaagtat atttgctttt ttcgtatatt tggttcatct
     1201 ttttttgatg ttttacatat tcacaatgca gaggatttat accagaagac attagtcttg
     1261 agtaagatac tacaacatct ccaactattt tagccagcct gactacttga cttggtaata
     1321 tttgttgcta ataatcatgt ataaaataag cttatataca tagtaacttc agcaaaggat
     1381 ttagtaatga tccaaatcat atatcaatgt actgtttttt tctttaaaaa aacagtacat
     1441 tctattttat aatgactgtg tattcccatg gaaggagatc acccaattct cccccccgac
     1501 ttttgacgca gtgtcttgtt aacaggggga tttaccatgc ttattggcta tgtacgcgta
     1561 tcaacaaatg accagaacac cgatctacga cgtaatgcgt tgaactgtgc aggatatgag
     1621 ctgattgttg agcgaatggg agcttgattg gaagttgtta gggtatggtg tttacggtcg
     1681 ttgatatggc gaacaaacgc ggggagcgtc acgctcccta aatggtcgcg aaaatatctg
     1741 tggcattgtc aaatttgtga cggtgactaa tattttaatg atatgcaatt cgaaatggtg
     1801 tgctaacgta ttgatttaat tgtgacgcga tgttgtattt tatcgcgttt tgttgtctgt
     1861 ttttcattcg cttgatgttg ctatttacat gaaaaataaa gaatttattg tttttgaggt
     1921 gtgtttatga agcaaacagt ttatatcgcc agccctgaga gccagcaaat tcacgtctgg
     1981 aacctgaatc atgaaggcgc actgacgctg acacaggttg tcgatgtgcc ggggcaggtg
     2041 cagccgatgg tggtcagccc ggacaaacgt tatctctatg ttggtgttcg ccctgagttt
     2101 cgcgtcctgg cgtatcgtat tgccccggac gatggcgcac tgacctttgc cgcagagtct
     2161 gcgctgccgg gtagtccgac gcatatttcc accgatcacc aggggcagtt tgtctttgta
     2221 ggttcttaca atgcgggtaa cgtgagcgta acgcgtctgg aagatggcct gccagtgggc
     2281 gtcgtcgatg tggtcgaggg gctggacggt tgccattccg ccaatatctc accggacaac
     2341 cgtacgctgt gggttccggc attaaagcag gatcgcattt gcctgtttac ggtcagcgat
     2401 gatggtcatc tggtggcgca ggaccctgcg gaagtgacta ccattgaagg ggccggcccg
     2461 cgtcatatgg tattccatcc aaacgaacaa tatgcgtatt gcgtcaatga gttaaacagc
     2521 tcagtggatg tctgggaact gaaagatccg cacggtaata tcgaatgtgt ccagacgctg
     2581 gatataatgc cggaaaactt ctccgacacc cgttgggcgg ctgatattca tatcaccccg
     2641 gatggtcgcc atttatacgc ctgcgaccgt accgccagcc tgattaccgt tttcagcgtt
     2701 tcggaagatg gcagcgtgtt gagtaaagaa ggcttccagc caacggaaac ccagccgcgc
     2761 ggcttcaatg ttgatcacag cggcaagtat ctgattgccg ccgggcaaaa atctcacctc
     2821 atctcggtat acgaaattgt tggcgagcag ggactactgc atgaaaaagg ccgttatgcg
     2881 gtcgggcagg gaccaatgtg ggtggtggtt aacgcacact aaccgctgat ttaaccggcg
     2941 cagtctctcc tgcgccggtg tattaaccta tctcctgtaa cgcatgtctc tggcgttcga
     3001 cgatattggt ccacaaattg tctttatcgt cagtccacaa attaatcagc aaggcaaaaa
     3061 agcgttcagc tgccggagaa agcacggcat ctttgcggcg aataatcccc aatgtccgac
     3121 gtataacggg ttccaccagt gggataccaa taatcgaaga atagggcgca tggggcattg
     3181 ccagaccagg aagcgccgaa atccccagtc ctgcctccac tagtcctaat gacgtcgaaa
     3241 gatgacgcac ttcgtaaaac cagtccagct tccagggctt gtcggccagc tgttgttcta
     3301 tcaacagtcg gttgccgctg gaggagcgta cgccaatcat tttgtaaccc actaactcct
     3361 gccattctac aagctgcttt ttggccaatg gatggtcacg ccgacaggcc agcacgaacg
     3421 gctcgttgac cagtggggta aaatcaatgg atgaatttgt gacgttgttc atgtttatgc
     3481 caaagtctga ttcgttacac agcaccgatt ccatgcaatt attcgtgcct tgttccagaa
     3541 tccgcacttt aatattggga tacagctcat taaatttacc gattgccagc ggtaaaaaat
     3601 aaaatactgc ggtcggaata cacgctaacg tcaccatacc acgatgataa gcattcatat
     3661 cacgaatatt aaaaagcgtt tcatcgaatt tctttattaa ttcccgcgcc tccgggagca
     3721 acctttttcc tgcttttgtt aacgtaacct tgcgagttgt acgctcaaat agttgaatat
     3781 gtaaatcttc ctccatcttt tttattcttc gcgttaatgc aggttgcgta atattgagta
     3841 atttagcggc attgttaaac gaactggact ctgccagtat gacaaatgcc ttcatacttg
     3901 ataattcatg cttcattatt actccggaaa atggaagcga cgattttggg tggctggccg
     3961 ttaaaaattt taactgcatt tagccaactt aaattaatga aaaaatgtta ttaatcgttg
     4021 agctaaagtc attagagatg ctttgccctt aatgtaacca tatcgcaata agttatgttt
     4081 ttaaattgag ggaattatta tgaaaaaaat accctgcgtg atgatgcgag gtggaacctc
     4141 gaggggcgcg ttcctgttag cggaacattt acccgaagat caaacgcagc gcgataaaat
     4201 attgatggca attatgggtt ccggtaacga tctggaaatt gacggtattg gcggcggtaa
     4261 tccactgacc agtaaagtcg ccattattag ccgttccagc gatccgcgtg ctgatgtcga
     4321 ttatctgttt gcgcaggtaa tcgttcatga gcaacgtgtc gataccacgc ctaactgtgg
     4381 caatatgctg tctggtgttg gggcattcgc cattgaaaat ggtttgattg cagcgacttc
     4441 gccagttact cgcgtacgta tccgcaacgt caatacgggt acgttcatcg aagctgatgt
     4501 gcaaacgcca aatggtgttg tcgagtacga gggtagtgcc agaattgacg gcgtaccggg
     4561 tactgccgca ccggttgcgc tcactttcct gaatgccgct ggaaccaaaa ccggaaaagt
     4621 tttcccgact gataatcaga ttgattattt tgacgatgtc ccggtgacct gtatcgatat
     4681 ggcgatgcca gtcgtcatta ttccggctga atatctggga aaaacaggtt atgaattacc
     4741 ggcggaactg gatgccgaca aagcattatt agcctgcatt gaatctatcc gtctacaagc
     4801 gggtaaagca atgggcttag gtgatgtcag taatatggtt atccctaaac ctgtgcttat
     4861 ttctccagcg cagaaaggcg gggcaattaa tgtgcgttat tttatgccgc attcttgcca
     4921 tcgcgcgctg gcgataaccg gtgctattgc tatttccagt agttgtgcat tggaaggcac
     4981 cgtcacccga caaatcgtcc cttctgtagg atatggcaat atcaatattg aacaccccag
     5041 tggtgcgctc gacgttcatt taagtaatga aggtcaggat gccacgacgt tacgcgcatc
     5101 tgttattcgg acaaccagaa aaatattttc cggtgaagtt tatcttccct gaaaaaattc
     5161 gttgtcagga taaggataat caataaagga cttctgtatg agtcatacag aaagaacagg
     5221 attttaaatg aataagaaat cgttatggaa gctaattctg atattagcga tcccatgtat
     5281 tattggtttt atgccagctc cggcaggatt aagcgaactg gcgtgggtgc tttttggtat
     5341 ttacctggcg gccattgtgg gtctggttat caagcctttc ccggaacctg tcgtactgtt
     5401 aattgccgtt gctgcctcaa tggtggtggt cggtaactta tccgacggtg cgtttaagac
     5461 caccgccgta ttaagcggtt actcttcagg tactacctgg ctggtgttct cggc
//
LOCUS       DADMHC010000225         5483 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.228, whole genome shotgun sequence.
ACCESSION   DADMHC010000225 DADMHC010000000
VERSION     DADMHC010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5483
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.228"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(97..337)
                     /locus_tag="JNZ57_003623"
                     /pseudo
     CDS             complement(97..337)
                     /locus_tag="JNZ57_003623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309113.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(553..933)
                     /locus_tag="JNZ57_003624"
     CDS             complement(553..933)
                     /locus_tag="JNZ57_003624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001204744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitermination protein Q"
                     /protein_id="HAY8829692.1"
                     /translation="MRDIQMVLERWGAWAASGNTGVDYSPIAAGFKGLLPSATKPRPA
                     CCDDDGLIIENCLARLKQKKPEEYSLLIAHYLLRISKRQIARTRKKSEKAIRIEMQIA
                     EGFIDGCLSVLGVRLEMDDWLLKK"
     gene            complement(951..1940)
                     /locus_tag="JNZ57_003625"
     CDS             complement(951..1940)
                     /locus_tag="JNZ57_003625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001764249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF968 domain-containing protein"
                     /protein_id="HAY8829693.1"
                     /translation="MRALLTPEIAPRMGIVLFRPGSELMPLFMQGRVLLEPEPERYSS
                     FASGAVPAASQPLADDPAVRAVFRNEEVIRRAGGVECLESWLLREKGCQWPHSDWHSE
                     NMTTMRHAPGAIRLCWHCDNLLRDQFTERLESMATDNCARWVLSVVRRDLGFDDSHVV
                     TMPELCWWLIRNDLADALPESAARKALRLPKPVVPTVTRESDLVPSVPATSIIQDKAK
                     KVLALKVDPESPESFMLRPKRRRWVNEKYTRWVKTQPCACCGKPADDPHHLIGHGQGG
                     MGTKAHDLFVLPLCRKHHDELHADTVAFEEKYGSQLELIFRFIDRALAIGVLS"
     gene            complement(1948..2757)
                     /locus_tag="JNZ57_003626"
     CDS             complement(1948..2757)
                     /locus_tag="JNZ57_003626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001061373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
                     /protein_id="HAY8829694.1"
                     /translation="MNNLMVIDGIEVRRDAYGRYSLNDLHRAAVASGANARTKEPGKF
                     ISSQQTVELVYELTNTQNLGVDPVSMIHGGNERGTYVCKELVYAYAMWISPSFHLKVI
                     RTFDMVTSAPEKLSGQAADKMQAGVILLDFMRRELNLSNSSVLGACQKLQEAVGLPNL
                     APRYAIDAPADAPDGSSRPTLSLSALLKQYGIRLTANQAYHQMVKLGIVEQRERYSRT
                     AINNIKKFWSLTAKGCMFGKNITCPANPRETQPHFFESRFPELLKLLDTVH"
     gene            complement(2777..3166)
                     /locus_tag="JNZ57_003627"
     CDS             complement(2777..3166)
                     /locus_tag="JNZ57_003627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000767134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HAY8829695.1"
                     /translation="MKLILPFPPSVNTYWRHPNKGAFAGKSLISAAGRKFQSAACAAI
                     VEQLRRLPKPTSAPASVEIVLFPPDNRIRDLDNYNKALFDALTHAGVWEDDSQVKRML
                     VEWGPVIPKGKVEITISKYEKTAGAAA"
     gene            complement(3163..3816)
                     /locus_tag="JNZ57_003628"
     CDS             complement(3163..3816)
                     /locus_tag="JNZ57_003628"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001378271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage N-6-adenine-methyltransferase"
                     /protein_id="HAY8829696.1"
                     /translation="MSNKYCQALVELRNKPAHELKEVGDQWRTPDNIFWGINTLFGPF
                     VLDLFTDGDNAKCAAYYTAEDNALAHDWSERLAELKGAAFGNPPYSRASQHEGQYIIG
                     MRYIMKHASAMRDKGGRYVFLIKAATSEVWWPEDADHIAFIRGRIGFELPAWFIPKDE
                     KQVPTGAFFAGAIAVFDKTWKGPAISYIGRDELEACGEAFLAQVRQQAEKLVREMVA"
     gene            complement(3816..4304)
                     /locus_tag="JNZ57_003629"
     CDS             complement(3816..4304)
                     /locus_tag="JNZ57_003629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001531318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PerC family transcriptional regulator"
                     /protein_id="HAY8829697.1"
                     /translation="MSLLNEVQKFIEAHPGCTSGDIADAFAGYSRQCVLQSASKLRQS
                     GRVAHRCEGDTRRHFPRLTERAQEAEPQPVRETRPVRNFYVGTNDPREILCLTRQAEE
                     LESRGLYRRAATVWMAAFRESHSQPERNNFLARREQCLRKSSKRAVSGDEWYLSGNYV
                     GA"
     gene            complement(4301..5125)
                     /locus_tag="JNZ57_003630"
     CDS             complement(4301..5125)
                     /locus_tag="JNZ57_003630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000061542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY8829698.1"
                     /translation="MSMELMVKAMKIRVGNPLRKLVLIKLADNASDQGECWPSYQHIA
                     DQCEISKRSVMNHIAALCESGLVKKVTRKGEKGNSSNIYLLHLDGAGDSLGGSANNSL
                     SGAANSPGSAGVAPRGSAGDSPRTSHSFEPVKEPVNEPIAVGASVDESVRVRSNRPEY
                     SPEFEQAWLAYPKRAGGNSKSAAFKAWKARLNEGVNPETMLEGVKRYAGWVSAMGNSG
                     TQFVKQAVTFFGPDRHFEESWEVPAVSAARREDPYFKASYDNVDYSQIPAGFRGGL"
     gene            complement(5122..5346)
                     /locus_tag="JNZ57_003631"
     CDS             complement(5122..5346)
                     /locus_tag="JNZ57_003631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001401086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829699.1"
                     /translation="MIRNIFKRFTNQTFHCPRPGQWYTTPAGHVLRVSLVDRECQKVI
                     CEPLGRNYRISMPLIAFRSGKNMKHLGGAA"
BASE COUNT         1301 a         1574 c         1268 g         1340 t
ORIGIN      
        1 cctgtctctg ataggctcat tctgcttttg cgcaaagcag tgggcctgag gtttgcttgt
       61 gaacccaacg catgagcaga tggctggtgg gtgcccctaa cacccaccag ccgcccattt
      121 accacaaata aaaaagcctt caggactgaa ggcgtctgta acaaccgaac tgatagtctg
      181 ccagacccgc cataacaagt tgggtcagta ttaactgaca gcgttcgcgt gaaaggtaag
      241 tattctgcgc aatctccccg actgtcgccg gttcggtgac gcttaattca ttaaacacca
      301 ctctggcggt ttctgtcata tcctgctgtt tcagcatgtc tttttccctt ttccggttaa
      361 cgtgacacac caataactct tgtcgaaaaa gccagcaagc tgaaagacag gtattcaccg
      421 ccaccagcac gtttactgta ctggaccgat ttcagccata aaaaaacccg ctcgcggcgg
      481 gtttaagctg tgtggcgaag taaccactct taacatactg acatactttt tgcggaccgc
      541 actaatcatt ttttactttt ttagcagcca gtcgtccatc tccagtctta cccccagcac
      601 agacaaacat ccgtcaataa acccttcggc tatctgcatc tcaattcgta ttgctttttc
      661 gcttttcttt ctcgtcctgg ctatctgtct ttttgatatt cgcaacaaat aatgagcaat
      721 gagaagcgaa tactcctcag gttttttctg cttcagacga gcaagacagt tttcaatgat
      781 aagtccgtca tcatcgcagc aggccggacg tggtttagtg gcagatggta aaagtccttt
      841 gaatccggca gcgatcggag aatagtccac cccggtgtta ccacttgcag cccatgcccc
      901 ccagcgttca agaaccatct gaatatcacg catcaacttt ctccacaaaa tcaggacagc
      961 acaccaatcg ccagcgcgcg atcgataaaa cgaaatatca gctccagttg ggagccatac
     1021 ttctcttcaa atgccacggt atccgcatgc agttcgtcat ggtgttttct gcacaaaggc
     1081 aacacaaaaa ggtcatgcgc ttttgttccc attccaccct gaccgtgacc tatcaggtgg
     1141 tggggatcat cagcgggctt tccacaacat gcacacggct gtgtcttaac ccagcgcgtg
     1201 tacttttcat taacccagcg gcgacgtttt gggcgtaaca taaaagactc cggcgactcc
     1261 ggatccactt tcagcgccag cacctttttc gccttatcct ggatgatgct ggtggcagga
     1321 accgaaggca caaggtcact ttcccgggta acagtcggca caacaggctt cggtaatctc
     1381 agtgccttac gggctgcact ttccggtaag gcatccgcca gatcattacg aatcagccac
     1441 cagcacagtt ccggcattgt cacaacgtga ctgtcatcaa aaccgagatc ccgacgcaca
     1501 acagacaaca cccagcgggc acagttatcc gttgccattg attccagccg ttccgtgaac
     1561 tggtcacgga gaagattgtc acagtgccag cacagacgga ttgcacccgg agcgtgtcgc
     1621 attgtggtca tgttctcgct gtgccagtcg gaatgaggcc actggcagcc tttttcacga
     1681 agtaaccagc tttcaagaca ttccacgcca ccagcacgac ggatcacttc ctcattgcgg
     1741 aacacggccc gaacggcagg atcatccgcc agcggttgtg atgccgccgg aacggcacca
     1801 ctggcgaaag atgaataacg ctccggctca ggctccagca ggacacgccc ctgcataaac
     1861 aggggcatca gctctgaacc tggtctgaac aatacgatcc ccatacgcgg ggcaatttca
     1921 ggggtcagta gtgctctcac ggtcacctca atgaacggta tcgagcagct ttaacagctc
     1981 agggaatcgg gattcgaaga aatgcggctg cgtctcgcgc ggatttgcag gacaggtgat
     2041 gttcttgccg aacatgcagc ctttcgctgt cagcgaccag aattttttga tgttgttaat
     2101 cgcggtacgg ctgtatcgtt cgcgctgctc gacgatcccc agcttaacca tctggtgata
     2161 tgcctgatta gccgtaaggc ggataccata ctgtttcagc agtgcactca gcgacagcgt
     2221 ggggcgactt gagccatcag gcgcgtcagc aggagcatca atggcatagc gcggtgccag
     2281 attcggtaag ccaacagcct cctggagttt ctgacaggca ccaagcactg aagagttaga
     2341 caggtttaat tcccggcgca taaagtccag cagaatcaca ccagcctgca tcttgtcagc
     2401 agcctgtccg gataattttt ccggtgcgct ggttaccatg tcgaaagtac ggatcacctt
     2461 cagatggaat gacgggctga tccacattgc ataggcatac accagttcct tgcagacata
     2521 cgttccccgt tcatttcccc catgaatcat actcaccggg tcaacaccca aattctgggt
     2581 gttggtcaat tcataaacaa gctcaacagt ttgttggctg gaaataaact ttcccggctc
     2641 cttggttctg gcatttgcac cagatgctac tgctgcgcga tgcagatcgt tcaggctgta
     2701 acgcccataa gcatcacgac gaacttcaat accatcaatg accatcagat tattcatact
     2761 tcgtttctcc tcttgatcag gcggctgcac ccgccgtttt ctcgtactta ctgatagtga
     2821 tctcgacctt ccctttcggg ataaccggtc cccactccac cagcattctt ttcacctgac
     2881 tgtcgtcttc ccacacaccc gcgtgggtca gggcgtcaaa cagcgccttg ttatagttgt
     2941 ccagatcgcg gatccggtta tccggaggaa acaacacgat ctccactgaa gcaggtgccg
     3001 acgttggttt cggcagacga cgtaactgct caactattgc tgcgcacgcc gcgctctgga
     3061 attttcgccc cgccgcgctt atcaggctct taccagcaaa cgcccctttg ttggggtgtc
     3121 gccagtacgt gttcacgctg ggcggaaaag gcagtattag cttcatgcca ccatctccct
     3181 gaccagtttt tccgcctgct ggcgaacctg cgccagaaat gcctcaccac atgcctcaag
     3241 ttcatcgcgc ccgatgtagc tgattgccgg tcccttccag gtcttgtcga aaacagcaat
     3301 agcaccagcg aagaaagcac ctgttggcac ctgcttttcg tctttcggga taaaccaggc
     3361 aggcagttca aaaccaatac gcccgcgaat aaaagcaata tgatctgcat cttccggcca
     3421 ccacacttcg ctggtggcag ctttgatcag gaaaacatag cgcccgcctt tatcacgcat
     3481 ggcactggca tgcttcatga tgtaacgcat gccgatgatg tattgcccct catgctgact
     3541 ggcgcggctg tacgggggat tgccaaaggc agcaccttta agctccgcaa gacgttctga
     3601 ccagtcatgc gccagcgcgt tgtcttccgc cgtgtaatac gcggcacatt tggcgttatc
     3661 accgtcagtg aacagatcca gaacaaacgg accaaacaag gtgttaattc cccagaaaat
     3721 gttgtccggc gtgcgccact gatcgcccac ttccttcagt tcatgggctg gtttgttccg
     3781 cagttccacc agcgcctggc aatatttatt actcattaag cccccacgta attccctgac
     3841 agataccact catcacccga tacagcgcgc ttactgcttt tccgtaaaca ctgctcacga
     3901 cgcgccagaa aattgtttcg ttctggctgg gagtggcttt cacggaatgc cgccatccac
     3961 accgttgcag cacgacggta taagcccctg gactccagtt cttccgcctg gcgggtcagg
     4021 cacaaaatct cccgcgggtc gttagtgccg acatagaaat tgcgcacagg tctggtttca
     4081 cgaactggtt gcggttccgc ctcctgcgct ctctcagtca ggcgcgggaa atgtctgcgt
     4141 gtatcccctt cacaacggtg agccacacga ccactctgac gtaatttgct tgctgactgc
     4201 agaacgcact gccgtgagta acctgcaaaa gcatccgcaa tgtctccgga agtacacccc
     4261 ggatgggctt caatgaattt ctgaacttca ttcaaaagac tcataatccc cccctgaatc
     4321 ctgccgggat ctggctgtag tccacgttgt cgtaactggc tttgaagtac gggtcctcgc
     4381 gtctggctgc agataccgca ggaacttccc aggattcttc gaaatgacga tctggaccaa
     4441 agaacgtgac agcctgtttc acaaattgtg tgccgctatt gcccatcgca gatacccagc
     4501 ccgcgtagcg tttcacacct tccagcatgg tttcggggtt taccccctcg ttcaaacggg
     4561 ctttccaggc tttgaaggct gcagattttg aattgccacc agcacgtttg ggatatgcca
     4621 gccatgcctg ctcaaactcc ggagagtatt ccggtcggtt tgaacgaact cgcacggact
     4681 catcaactga tgcaccaaca gctattggtt cattgactgg ttctttgact ggttcaaaag
     4741 agtgactggt tctgggtgaa tctcctgcac taccccttgg tgcaactcct gcactacctg
     4801 gtgaatttgc tgcaccagat agtgaattat ttgcactacc ccctagtgaa tctcctgcac
     4861 catcaagatg aaggagatag atattacttg agttaccttt ttcacctttc cgggtgactt
     4921 tttttaccag cccggactca caaagggccg caatatgatt catcacagaa cgtttgctaa
     4981 tctcgcactg gtcagcaata tgctggtagc tgggccagca ctcaccctga tcgctggcat
     5041 tatcagccag cttaatcaga accagttttc gcaatggatt tcccactcga attttcatcg
     5101 ctttaaccat cagctccata ctcatgcagc acctccgaga tgcttcatgt tttttccgga
     5161 gcgaaaggct ataagcggca tactgatgcg gtaattacgg cccagcggtt cacaaatcac
     5221 cttctgacat tcacggtcaa ccaggctaac acgtagaaca tgccctgcag gcgtggtgta
     5281 ccactgaccc ggacgaggac aatggaaagt ctgattggta aaccgtttga aaatattccg
     5341 gatcatttgc gcccccttac ctctgaaggg ttcagcgaca aatttatgag gcaggccagt
     5401 gccgaagcat cattaatata gtcatacaag ctaacagcca gcggagattc ggcttttgcc
     5461 aactgaagtg gtcaacaaaa act
//
LOCUS       DADMHC010000226         5476 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.229, whole genome shotgun sequence.
ACCESSION   DADMHC010000226 DADMHC010000000
VERSION     DADMHC010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5476)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5476)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5476
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.229"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(22..594)
                     /locus_tag="JNZ57_003632"
                     /pseudo
     CDS             complement(22..594)
                     /locus_tag="JNZ57_003632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706347.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            812..1672
                     /gene="tesB"
                     /locus_tag="JNZ57_003633"
     CDS             812..1672
                     /gene="tesB"
                     /locus_tag="JNZ57_003633"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase II"
                     /protein_id="HAY8829700.1"
                     /translation="MSQALKNLLALLNLEKIEAGLFRGQSEDLGLRQVFGGQVVGQAL
                     YAAKETVPEERLVHSFHSYFLRPGDSKKPIIYDVETLRDGNSFSARRVAAIQNGKPIF
                     YMTASFQAPEAGFEHQKTMPSAPAPDGLPSETQIAQSLAHLLPPVLKDKFICDRPLEV
                     RPVEFHNPLKGHVAEPHRQVWIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHGIG
                     FLEPGIQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVAST
                     VQEGVMRNHN"
     gene            complement(1721..3007)
                     /gene="amtB"
                     /locus_tag="JNZ57_003634"
     CDS             complement(1721..3007)
                     /gene="amtB"
                     /locus_tag="JNZ57_003634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter AmtB"
                     /protein_id="HAY8829701.1"
                     /translation="MKIATIKTGLASLAMLPGLVMAAPAVADKADNAFMMICTALVLF
                     MTIPGIALFYGGLIRGKNVLSMLMQVTVTFALVCILWVVYGYSLAFGEGNNFFGNVNW
                     LMLKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTL
                     SYIPIAHMVWGGGLLASHGALDFAGGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPH
                     NLPMVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGWIFGEWALRG
                     KPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPC
                     DVFGVHGVCGIVGCIMTGIFAASSLGGVGFAEGVTMGHQLLVQLESIAITIVWSGVVA
                     FIGYKLADLTVGLRVPEEQELEGLDVNSHGENAYNA"
     gene            complement(3037..3375)
                     /gene="glnK"
                     /locus_tag="JNZ57_003635"
     CDS             complement(3037..3375)
                     /gene="glnK"
                     /locus_tag="JNZ57_003635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HAY8829702.1"
                     /translation="MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAE
                     LYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRI
                     RTGEADEAAL"
     gene            complement(3556..5330)
                     /locus_tag="JNZ57_003636"
                     /pseudo
     CDS             complement(3556..5330)
                     /locus_tag="JNZ57_003636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308530.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SmdB family multidrug efflux ABC transporter
                     permease/ATP-binding protein"
     gene            complement(5323..>5476)
                     /locus_tag="JNZ57_003637"
     CDS             complement(5323..>5476)
                     /locus_tag="JNZ57_003637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HAY8829703.1"
                     /translation="IVMQHGHIAQRGNHDELAQQSGWYRDMYRYQQLEAALDDAPEIR
                     EEAVDA"
BASE COUNT         1334 a         1592 c         1359 g         1191 t
ORIGIN      
        1 ggcggagagg gttaacatcg cttaatattg cgtaggagct ggaactgccg aagacggatt
       61 cacctgagtt ggtgaagtcg aaggtacggt agtcgttgca ccaccgctgg cctgaaccgg
      121 cacggcggtt tgctacaccg gcaccaatgt caggtcggct ttagttccgc ccttgttgat
      181 caccggctga acggtatcgg taataaatac cagtttgtca ttcacggtaa tcgccgcact
      241 caacagaata cgcgcgttcg gctgaacatc tgccgggtta aatggcagaa caaagctgaa
      301 tggtgactgt ttaccttcgg tacgcaccgc tttctgcgcc agcacttttg acggtgcatc
      361 ggctaacgac gcgtcagaaa gtgtcacggt cagcacagca tcaggcggca gtgcgacttt
      421 ctgccggatc cagacggtac cggagacatt cggttgctgg atagcaggtt gttgtgttgc
      481 tgaaatagac gtatttgcag ccggggctgg cgtctgaata tccgcgcttt tatctgcgca
      541 agccgccaac gcaatcgcaa ccgctaaacc actggccatg tgcacgagtt tcattcattt
      601 ctccttatta tcaatgcacc agcgggctaa ctttcctcgc cggaagagtg gttaacaaaa
      661 tagtaacgtc aataagtgtg gcacacatca cgcatttctg cctgtaatca gcccgtaatt
      721 cagattattg cacccatcgg accagtggca aatttgcgtt atactcaact cactttggct
      781 tgctgcggca gctttgttac tggagagtta tatgagtcag gcgctaaaaa atttactggc
      841 attgttaaat ctggaaaaaa ttgaggcagg actctttcgc ggccagagtg aagatttagg
      901 tttacgccag gtgtttggcg gccaggtcgt gggtcaggcc ttgtatgctg caaaagagac
      961 cgtcccggaa gagcggctgg tacattcgtt tcacagctac tttcttcgcc caggcgatag
     1021 taagaaaccg attatttatg atgtcgaaac gctgcgtgat ggtaacagct tcagcgcccg
     1081 ccgggttgct gctattcaaa acggcaaacc gattttttat atgacggcct ctttccaggc
     1141 accagaagcg ggtttcgaac atcaaaaaac aatgccgtcc gcgccagcgc ctgatggcct
     1201 gccttcggaa acgcaaatcg cccaatcgct ggcgcacctg ctgccgccag tgcttaaaga
     1261 taaattcatc tgcgatcgtc cgctggaagt ccgtccggtg gagtttcata acccactgaa
     1321 aggtcacgtc gcagaaccac atcgtcaggt gtggatccgc gcaaatggta gcgtgccgga
     1381 tgacctgcgc gttcatcagt atctgctcgg ttacgcttct gatcttaact tcctgccggt
     1441 agctctacag ccgcacggca tcggttttct cgaaccgggg attcagattg ccaccattga
     1501 ccattccatg tggttccatc gcccgtttaa tttgaatgaa tggctgctgt atagcgtgga
     1561 gagcacctcg gcgtccagcg cacgtggctt tgtgcgcggt gagttttata cccaggacgg
     1621 cgtactggtt gcctcgaccg ttcaggaagg ggtgatgcgt aatcacaatt aaaaaaatag
     1681 ccggaggtga aaaccgtccg gctgtttttt gcagtgcttg ttaggcgtta taggcattct
     1741 cgccgtgact gttgacatcc agcccttcta gctcctgctc ttccggtaca cgcagaccaa
     1801 ccgtcagatc cgccaatttg tagccaataa atgccaccac accggaccag acgatcgtaa
     1861 tggcgatgct ttccagctgt accagcaact gatgacccat cgtcacacct tcagcgaagc
     1921 ccacgccgcc cagcgagctg gcggcaaaaa tcccggtcat gatacagccg acaatgccac
     1981 aaacgccgtg cacaccgaag acatcgcagg gatcatccac ccgcagcaag cgtttgagca
     2041 tggtaacgcc ccacaagccc gccagaccag ctaccacgcc gataatcaac gcgccgccaa
     2101 ccccaatgta gccgcacgct ggcgtcacgc cgaccagacc ggcaatcgcg ccagaacacg
     2161 cccccagcag tgaaggctta ccacgcagcg cccattcacc gaagatccag ccaagaattg
     2221 ccgccgccgt tgcgaccaca gtattcacaa atgccagtgc cgcgatttca ttcgccgtgc
     2281 ccgctgaccc ggcgttaaag ccaaaccaac cgatatagag aatggcagtc ccggtgaaga
     2341 ccatcggcag gttgtgcggt ttaaacgcct ctttaccgaa gcccacgcgt ttgcctatca
     2401 gatacgcgcc caccagaccg gcgattgcgg cgttaatgtg caccactgtg ccacccgcga
     2461 aatccagtgc accgtgagaa gccagcaaac cgccgcccca caccatatgc gcaatcggaa
     2521 tgtaagagag cgtcagccat accaccacga aaatcaacac agctgagaag cggattcgtt
     2581 ccgccagcgc cccaactatc aagcctacgg taatgcaggc aaacgatccc tgaaacgcta
     2641 cgtggatata ctgataaatg ctgcccatca ccgccgtcag ttcgatgttt ttcagcatca
     2701 accagttaac gttgccgaag aagttgttac cctcaccaaa cgccagcgag taaccgtaaa
     2761 ccacccagag aatacagacc agtgcaaacg tcaccgtcac ctgcatcagc atcgacagca
     2821 cgtttttgcc gcgaatcaac ccaccgtaaa acagggcaat ccccggaata gtcataaaca
     2881 gcaccagcgc agtacaaatc atcataaacg cattgtcggc tttatcggcc accgcaggtg
     2941 cagccattac cagtcccggc agcatcgcca gtgaagcaag cccagttttt atcgtcgcta
     3001 tcttcatttt tcgttcctgt tgctgtgtgc cagagattac agcgccgctt cgtcggcttc
     3061 gccggtacga atacgaatga cgcgttgcaa ttcagcgacg aagattttgc cgtcgccaat
     3121 ttttccggtg taagccgcct tactgacgat atcgatcact tcatcgagtt ggtcatcagc
     3181 aattgccaca tcaattttta cttttggcag gaagttgacg ctgtattccg ccccccggta
     3241 cagctcggca tgccctttct gacgcccgaa acctttcact tcggtgacgg tcaagccctg
     3301 aataccaatg gaagataacg cttcacgaac gtcttccagc ttgaatggtt tgattatcac
     3361 ggtcaccagc ttcatagatc ccctccggtc agaattcggt aatggttctg ctacacgaag
     3421 aaggtattgc aagcggtgtg ccagaaatga aaaacgagaa agagagcagg aagttaagaa
     3481 gattgaaaat gaaaacgcac tatgacagtg cacagtgcgt tacatttttg caccaacgat
     3541 gaaatattgc gctattcagg cgctcaatga ttcttcttca cgcacgctgg ctgccagctc
     3601 ttcgcccgca agttgcagtt gatacatctg ccagtagcgt ccctgggccg ccagcagttg
     3661 ctggtgagtg ccctgctcca cggcttgccc acgatgaagc accagaatgg tgtcggcatc
     3721 aacaatggtc gataagcggt gagcaatcac caccagcgtg gtatgttcac gcacagccgc
     3781 cagagcatgt tgaatcgcct gttcagtacc ggagtcaatg ctggcggttg cctcatcaag
     3841 gatcaggatt tgcggcgtct ccaccaacac gcgtgccagt gccagcagtt gcttttgccc
     3901 gacggagaga ttattcccct gctcgcccag cggcgtataa ataccatcac tcatgctgcg
     3961 cgccagctcc gccagttgca cggtttccag cgcctgccag acgcgttctt cggagatatc
     4021 acgccccagc gtcacgttgg cgaggaaggt atccgccagc accaccggat cttgctgcac
     4081 cattgccacg ccctggcgca gcgcgctgtg acttagcgaa cttaatggac gaccatcaag
     4141 gcgaatctca ccttccgtta gcgggtaata gcccatcaat aaactggcga gggtgctttt
     4201 gccactgccg gtatgcccga ccagtgccac aaagttacgc gaaggcacag agagattaat
     4261 gttctttagc accagattgt catcgcgata agcaaatgac acgttatcga cttcgatggt
     4321 gccactctgt aacgggcgat catcattgcc atattgctgg cgcggtccgt ccatcagttc
     4381 aaacacgcgc tcaccagcaa caacagcctg ttgcagcatc gcctgttgcg tggtcagttc
     4441 gattaagggt tcattaagtc gcccaagata gctgataaac gcatacagca cgcctacttc
     4501 aatggtgccg ctagcggaga agccaaacag catcaacaag ccacaaagaa tgagcgatga
     4561 aaacagactc agcagcggac gcagcagaaa accgtcgagg cgcagggttt gcatcctggc
     4621 catatagtgt gaacgactgg cctcccccat acgttcgcta aatcgcgcct gctgacggaa
     4681 ctgctggata acgctcatgc cattgatgat ttcgttaaag ccgtcgttga tatccgccag
     4741 ataggcgcgc acacgacgga caatcggcgt gctgtaacgc tggtatatca ccattaccac
     4801 cagcaccacc gggaaaatca ttatcgccac cagcgccagt cgaggctgaa catcgccacc
     4861 agcatcgcgc ccaccagtgc ggcgctacgc aggacagttg ccactacggt aacgtagaga
     4921 tcgcggatca cttcagtgtc attagtgacg cgggaaatca cctgcccgac gggttgggta
     4981 tcaaactcgc ttaatggctg gcgcaatgcg gcatccatca cgtcggtacg caactgttgc
     5041 actactccta ctgccgcccg attaaacagc agcgactgcg cgtaatgtag cccggcggca
     5101 aacagttgta gcccaacata cgccgcagcc agccctgcaa ccattttcaa cggcaggtta
     5161 tttttcgcta ccatattgtc gataaaatag ctgataagca gcggcccact gacttctgcc
     5221 gctgccgcaa cccacatcat caggaccgca atccccagcg gtttacgcca cggcgaaccg
     5281 tacgctaaca gacgcttgag agtcggccac agttggctaa aactacgcat cgacggcctc
     5341 ctcgcgaatt tccggagcgt cgtcgagcgc cgcctccagt tgttgatagc gatacatatc
     5401 gcgataccag ccgctttgtt gcgccagctc atcatgattg ccacgctggg cgatatgtcc
     5461 gtgctgcatc acaata
//
LOCUS       DADMHC010000227         5337 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.230, whole genome shotgun sequence.
ACCESSION   DADMHC010000227 DADMHC010000000
VERSION     DADMHC010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5337)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5337)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5337
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.230"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(889..1830)
                     /gene="fabY"
                     /locus_tag="JNZ57_003638"
                     /gene_synonym="yiiD"
     CDS             complement(889..1830)
                     /gene="fabY"
                     /locus_tag="JNZ57_003638"
                     /gene_synonym="yiiD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001666856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid biosynthesis protein FabY"
                     /protein_id="HAY8829704.1"
                     /translation="MYHLRVPQTEEELERYYQFRWEMLRKPLHQPKGSERDAWDAMAH
                     HQMVVDEQGNLVAVGRLYINADNEASIRFMAVHPDVQDKGLGTLMAMTLESVARQEGV
                     KRVTCSAREDAVEFFAKLGFVNQGEITTPTTTPIRHFLMIKPVATLDDILHRGDWCAQ
                     LQQAWYEHIPLSEKMGVRIQQYTGQKFITTMPETGNQNLHHTLFAGSLFSLATLTGWG
                     LIWLMLRERHLGGTIILADAHIRYSKPISGKPHAVADLGALSGDLDRLARGRKARVQM
                     QVEIFGDETPGAVFEGTYIVLPAKPFGPYEEGGNEEE"
     gene            complement(1875..2312)
                     /gene="dtd"
                     /locus_tag="JNZ57_003639"
     CDS             complement(1875..2312)
                     /gene="dtd"
                     /locus_tag="JNZ57_003639"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000560980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HAY8829705.1"
                     /translation="MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANR
                     LCERVLGYRIFSDAEGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRA
                     EALYDYFVERCRQQEMNTQTGRFAADMQVSLVNDGPVTFWLQV"
     gene            complement(2309..3181)
                     /locus_tag="JNZ57_003640"
     CDS             complement(2309..3181)
                     /locus_tag="JNZ57_003640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor BrkB family protein"
                     /protein_id="HAY8829706.1"
                     /translation="MLKTIQDKARHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSL
                     LSLVPLVAVVFALFAAFPMFSDVSIQLRHFIFANFLPATGDVIQRYIEQFVANSNKMT
                     AVGACGLIVTALLLMYSIDSALNTIWRSKRARPKIYSFAVYWMILTLGPLLAGASLAI
                     SSYLLSLRWASDLNTVIDNVLRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAA
                     LLFEAGKKGFALYITMFPSYQLIYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYR
                     KLKQAAEQEEDDEP"
     gene            complement(3175..3774)
                     /gene="yihX"
                     /locus_tag="JNZ57_003641"
     CDS             complement(3175..3774)
                     /gene="yihX"
                     /locus_tag="JNZ57_003641"
                     /EC_number="3.1.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312835.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphatase"
                     /protein_id="HAY8829707.1"
                     /translation="MLYIFDLGNVIVDIDFNRVLGAWSDLTRVPLATLKKSFHMGEAF
                     HQHERGEISDEAFAEALCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHR
                     VVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSD
                     TVFFDDNADNIEGANQLGITSILVKDKTTIPDYFAKVLC"
     gene            complement(3915..4802)
                     /locus_tag="JNZ57_003642"
     CDS             complement(3915..4802)
                     /locus_tag="JNZ57_003642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001309103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase"
                     /protein_id="HAY8829708.1"
                     /translation="MKTERKNEHYLALQQAFDAPWPGPVGELVTLEKGNIHLQIYPHD
                     GARITSLKAFGSEVLRQWQPQRRAFQYGCFPMVPWAGRLGNAMLNAGGQCYSLPANKP
                     PHALHGMACYSTWEIIDKTADSLTLRMPLASPWPWQGEVIQTFLLENDALVLQLEVHS
                     YADTFPASAGWHPWFAKKLTPQNTESLQVLFDADWQEEAGSDELPTGNRISPQAGPWD
                     DCFGFYNGVKVKLLWPGKLAMTMISSANSLVVFDKQPDATCINPLTQAPNAINLTPEL
                     VTPDRPLVIETRWQFTPES"
     gene            complement(4792..>5337)
                     /locus_tag="JNZ57_003643"
     CDS             complement(4792..>5337)
                     /locus_tag="JNZ57_003643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001291189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter"
                     /protein_id="HAY8829709.1"
                     /translation="FGIVYISSQLALSRDIPLTGMLIASAIGIFSCPLVGWLSDRIGQ
                     KSLYLSGAGFCVLFAFPFFLLLDSKSTLIIWCSMILGYNLGPTMMFAVQPTLFTRMFG
                     TKVRYTGLSFAYQFSAILGGLSPLIASSLLALGGGKPWYVALFLFAVSVLSFVCVWLI
                     EPTDEQETASYRYIREQSHEN"
BASE COUNT         1444 a         1345 c         1251 g         1297 t
ORIGIN      
        1 gataaatgaa gaaaaaccgt attcatcgcc attaccacca ccttacctat attactcatt
       61 aatgtatgtg cgaaaattac gccggaaaat cattaaaaaa aagcggattt ttgcatgttg
      121 ttttgttttt gcgaggcgtt ttccagaaat aataagagtg ttgcagttgt ttcatttatt
      181 actcaaaaat ggtttagtta tcgcccagga tgaattatgg gtgctatgaa tatattatat
      241 tcagagatat ttatttgcat aatctgaatg gtgtagccga aaaacgtcag catcctaaca
      301 gcaccaggat ttaaggtgaa attaatcttt catcacagac cggtcagtac tgccaccaac
      361 cggtctttac ttgctcatcg ttataatttt gttggtaaca gttcgggaac gttgtttttc
      421 taaattaaca acagaataac tttcttgttt aatgagatta atattggcaa ccattatagc
      481 ctccttccca cggtttaaga gcaaacatac aacataatga ttcataacat acagagcagt
      541 aaatgaatga tactgacaat gatgccagcc cattatcttt gcataatgtt tgtgagctat
      601 agattttaaa aatatttatg aggaaagtat ggcaccagag gaggttttga ctatcaaaaa
      661 tcgctcaaac ctgaactaag atgatgagtt aagcattatc tgcgataatt gccactcagc
      721 tctacaaata atatttaaat gctcctgaac agtgatgtag caagacacgt atggtgccaa
      781 cgaagaataa aaatttatag agttcttatt caatattacc ggcatagaca gggaatgatg
      841 taaatgaccg gaataaatga gagaggcagc accgcccctc tccataagct actcttcttc
      901 gttcccgccc tcttcatacg ggccaaatgg cttcgcgggc agaacgatat acgtgccttc
      961 aaacactgca cccggcgtct cgtcgccaaa gatttcaact tgcatctgca cccgtgcttt
     1021 tcgtccgcgc gccagacggt cgagatcgcc gcttaaggca ccaaggtcgg ctaccgcatg
     1081 aggtttaccg ctaatcggct tgctgtagcg gatatgcgca tcggccagaa taatcgttcc
     1141 gccgaggtgg cgttcgcgca gcatcagcca gataagcccc caaccggtga gcgttgccag
     1201 cgagaataaa ctcccggcaa acagcgtatg gtgcagattc tgattaccgg tttccggcat
     1261 ggtggtgata aatttttgcc cggtatattg ctgaatgcgc acgcccattt tttcactaag
     1321 cgggatgtgt tcgtaccacg cctgttgcag ctgcgcgcac cagtcgccgc gatgcaaaat
     1381 atcatccaga gtggcaacag gtttaatcat caaaaaatgg cgaatcggcg tggtggttgg
     1441 tgtggtgatt tctccctgat taacaaaccc cagcttggcg aaaaactcca ccgcgtcttc
     1501 acgggcgcta caggtcacgc gcttaacgcc ttcctgacgc gccaccgact ccagggtcat
     1561 cgccatcaac gtccccagcc ctttgtcctg cacgtcggga tgaacggcca taaagcgaat
     1621 ggacgcttca ttgtcggcat taatatacag tcggcctacc gccaccagat tcccctgctc
     1681 gtcgacgacc atctgatgat gcgccatcgc atcccacgcg tcgcgttccg aaccttttgg
     1741 ttgatgcagg ggcttacgca acatttccca gcgaaactga tagtaacgct ctaactcttc
     1801 ttctgtttgt ggaacccgaa ggtgatacat agcgatactc tctcttgttt cccgtgacaa
     1861 ccctggaagc tggctcatac ctgcaaccag aatgtcacgg ggccatcatt gaccagcgat
     1921 acctgcatat cggcagcgaa gcgtcctgtt tgcgtgttca tctcttgctg gcggcagcgt
     1981 tcgacgaaat agtcatataa cgcctctgcg cgatccggtg atgcgccttt ggagaaactt
     2041 gggcgcatcc cccgttcggt atctgcggcg agggtaaact gggaaaccac cagtacactg
     2101 ccgcccgcct gttgcacgtt gagattcatc ttgccttcgg catcgctaaa gatgcggtag
     2161 ccgagcacac gctcgcacag acggtttgct ttctgttcgt cgtcatcctt ttcgacaccc
     2221 aataacacca aaagtcccgc gccaatttcg cccgtcactt ctccctccac ggtgacgctg
     2281 gcacgggtta cgcgttgaat taatgcaatc atggttcgtc gtcttcttct tgttcagctg
     2341 cttgttttag tttgcggtat tccccgagag tgacagtaat ttccgcgcca agcaagacga
     2401 tacaccatgt ccagtagacc caaacaaaga gaatggggat caccgccagc acaccgtaaa
     2461 tgagctgata tgacgggaac atggtgatat aaagcgcgaa acctttcttt cctgcttcga
     2521 acaggagtgc ggcgacaaac gcgccgacaa tcgcgtcgcg gttaggtacg cggatggtag
     2581 gaacaatgct gtacagcaac cagaaggaga tccacgacaa cagcaacgga aaaatacgca
     2641 gcacgttgtc gatgacagta ttgagatcgc tcgcccagcg cagggagagc aaataggaac
     2701 tgatcgccag actggcccct gccagcagcg gccccagcgt taaaatcatc cagtacacgg
     2761 cgaacgagta aatttttggt cgcgctcgtt tactgcgcca gatggtattc aacgcgctat
     2821 cgatggagta catcaacaat aacgcggtga cgatcagccc gcacgcccca acggcggtca
     2881 tcttgttgga attggcaaca aattgttcga tataccgctg aataacatcg ccagtagcag
     2941 gcagaaagtt ggcaaaaata aagtgacgta actgaatgct gacgtcggaa aacatgggaa
     3001 aagcggcgaa aagcgcaaaa acaacggcaa ccagcggcac taatgagagc aacgacacat
     3061 aggcaaggtt acctgccagg gttgtcatgt tgtcctcatc aatacgttgc cagagtagtt
     3121 ttagccaggc ccatagtgga cgggtacggt gcctggcttt gtcctgaatg gtttttagca
     3181 taacaccttc gcgaaatagt ccgggatggt ggttttatct ttcaccagaa tactggtaat
     3241 gcccagctga ttggctcctt ctatattatc ggcgttatcg tcgaaaaaga ccgtatcgct
     3301 gggtgaaaaa ccttccgcct gcaaaacatg ctggtaaatt cgtgcttcag gtttgcgcat
     3361 ccccagatct tgcgacagat agatatggtc agcagcatca cgaatttccg ggtattcttc
     3421 cggccagaag gtggtatgca ggcggttggt attggaaagc accaccacgc gatgcccctg
     3481 ctcacgcagt ttatgcatga tggcgatcac ttccgggcgc agcgcaacaa acaccgcctg
     3541 ccagccgtga gagaactgct cgtagcttag cggtagagcc atctcatgac acagcgcctc
     3601 tgcgaacgct tcgtcgctaa tttccccacg ctcatgctga tgaaacgcct cccccatatg
     3661 aaaactcttc ttaagcgtag ccagtggaac acgcgttaaa tcgctccagg ctcccagcac
     3721 acggttaaag tcgatatcga caatcacatt acctaaatca aagatataga gcatttttgc
     3781 ctcctttcgc gccacaagaa attaactgta gcgggaaagg atgggtttgg ctatgtggca
     3841 ataagggtaa tcttgtgatg ctgattgcga aaaagcagag taatttcact ggctttttcg
     3901 caatagatga atggttaaga ttcaggtgta aattgccaac gagtttcgat gaccagcggc
     3961 ctatctggtg tcaccaattc cggcgttaga tttattgcgt taggtgcctg agtcagcggg
     4021 ttaatacagg tggcatcggg ctgtttatca aataccacca gactgtttgc agaagagatc
     4081 atggtcatcg cgagtttacc aggccacagt aacttaacct tcaccccgtt ataaaaacca
     4141 aaacagtcat cccagggacc ggcttgagga gagatacgat ttccagttgg cagttcatca
     4201 ctacccgctt cttcttgcca gtccgcatca aaaagcacct gcaacgattc tgtattttgc
     4261 ggagtcagct ttttcgcaaa ccacggatgc cagccagcgg aggccgggaa tgtatcggca
     4321 tatgaatgga cttccagttg caaaaccagc gcatcgttct ccagcaaaaa agtctgaatc
     4381 acttcccctt gccagggcca cggtgaagcc aggggcatac gtaaagtcag ggaatctgct
     4441 gttttgtcga tgatttccca cgttgagtaa caagccatac catgcaacgc atgtggtggt
     4501 ttattggcgg gtaaagaata acattgccca ccagcattca gcatcgcatt ccccagtcgc
     4561 cctgcccacg gcaccattgg gaaacagcca tactgaaaag ctctgcgctg cggctgccat
     4621 tggcgtaata cttcagaacc aaatgccttt aacgaggtta tcctggcacc atcatgcgga
     4681 taaatctgca ggtgaatatt gcctttttcc agcgtcacta actctcctac aggcccaggc
     4741 catggcgcgt caaacgcctg ttgtagcgcc aggtaatgct cgttttttcg ttcagttttc
     4801 atgagattgt tccctgatgt agcggtaaga agcggtttct tgttcatcgg tcggctcaat
     4861 cagccagacg caaacaaagg aaagaactga gacagcaaat aaaaacagag cgacatacca
     4921 cggttttcct ccccctagcg ccagcaaact tgaggcgata agggggctta gtccgccaag
     4981 aatcgcggaa aattgataag caaaagaaag gccggtatat cgtactttgg taccgaacat
     5041 gcgggtgaaa agtgttggct gcacggcaaa catcatcgtc ggacctaagt tgtagccgag
     5101 gatcatactg caccagatga tgagcgtact tttgctatcc agtaataaga agaaaggaaa
     5161 cgcgaacagg acacaaaatc ctgctcccga caaatacaga cttttttgac ctatacgatc
     5221 tgataaccat ccaaccaatg gacaactgaa aataccgatc gccgaggcaa tcaacatacc
     5281 cgtcagggga atatctcgcg acaatgctaa ttggctggaa atatagacaa taccaaa
//
LOCUS       DADMHC010000228         5307 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.231, whole genome shotgun sequence.
ACCESSION   DADMHC010000228 DADMHC010000000
VERSION     DADMHC010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5307)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5307)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5307
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.231"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            34..1305
                     /locus_tag="JNZ57_003644"
     CDS             34..1305
                     /locus_tag="JNZ57_003644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001415629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1983 domain-containing protein"
                     /protein_id="HAY8829710.1"
                     /translation="MYDPTVQFELWFSEAKIADTSQVETSARYLGTGSQWSVSGPHIK
                     PGKDFWFYVRSVNLVGKSAFVEASGRASNDAEGYLGLFREKIGKLHLAQGLWELIDNS
                     QLADEMAEMKTTITETRNEITQTVSKTLEEQSATIQQIQRVQKDTNDDLAALYMLKVQ
                     KTKNGIPYVAGIGAGIEDTDGQPLSNILLLADRIAMINPEDGNTTPLFVAQGNQLFMN
                     DVFLKRLFAVSITSSGNPPTFSLTPEGRLTARNADISGNVNANSGTLNNVTINENCRV
                     LGKLSANQIEGDLVKTVGKAFPRDSRAPERWPSGTVTVRIYDDQPFDRQIVIPAVAFS
                     GAKHEREHTDIYSSCRLIVRKNGAEIYNRTALDNTLIYSGVIDMPAGHGHMTLEFSVS
                     AWLVNNWYPTASISDLLVVVMKKATAGISIS"
     gene            1373..1962
                     /locus_tag="JNZ57_003645"
                     /pseudo
     CDS             1373..1962
                     /locus_tag="JNZ57_003645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706647.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
     gene            2027..3262
                     /locus_tag="JNZ57_003646"
     CDS             2027..3262
                     /locus_tag="JNZ57_003646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000279106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase S74"
                     /protein_id="HAY8829711.1"
                     /translation="MTVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPD
                     EAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMTEDDARPEA
                     LRRFELMVEEVVRNAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGDASESAR
                     QAAESAASAKQSEEASSSSASAAAQKASESLQSATDAELSKKTAESAAGNAVRDATTA
                     TEKARESTESAQSAEQSRIAAEEAVNRIPTVVGPPGPKGEPGPAGPQGPKGDTGAPGQ
                     GTELLTTANTWTQAQTFNGGINGNLTVTGNGSFNDIQIRSDKRNKRNLVKLDNALDRL
                     EALTGYLYEIQYSADGWQTSVGLIAQDAQKALPELVTEDADVISGEKRLRLNYNGIIA
                     LLVEGFKTLRHEIKELREK"
     gene            3348..3860
                     /locus_tag="JNZ57_003647"
     CDS             3348..3860
                     /locus_tag="JNZ57_003647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829712.1"
                     /translation="MGVTSGWVGSSAKSETGEQWMGAAGTKLGLSKPFMMSQMVGRTM
                     GCKIATEYYKWKSSDKVDNWGAVGADWPLEEKSKGTITNAASCGSGRLVGAVVTLSHF
                     LTNSTPTAAVYLAGGKAGNITVNVGGATQTMIYQGVVSGFQYYWSGSVSSAFVEAMKK
                     TGVPQDLKIS"
     gene            3936..4148
                     /locus_tag="JNZ57_003648"
     CDS             3936..4148
                     /locus_tag="JNZ57_003648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001114260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4376 domain-containing protein"
                     /protein_id="HAY8829713.1"
                     /translation="MPEKFFRTDADNNDVPMTAASWMALSEATEQAMFAKGVEINTRQ
                     LQMKAEVEALTDLKAIRSYVVGWPAG"
     gene            complement(4290..4614)
                     /locus_tag="JNZ57_003649"
                     /pseudo
     CDS             complement(4290..4614)
                     /locus_tag="JNZ57_003649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414822.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
     gene            complement(4750..4998)
                     /locus_tag="JNZ57_003650"
     CDS             complement(4750..4998)
                     /locus_tag="JNZ57_003650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI family protein"
                     /protein_id="HAY8829714.1"
                     /translation="MRIEICIAKEKMTKMPTGAVDALKEELTRRISKRYDDVEVIVKA
                     TSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWFVH"
BASE COUNT         1403 a         1152 c         1489 g         1263 t
ORIGIN      
        1 tattttcaga taacagcggt accgcgtctt gcggtgtatg acccgacggt acagtttgag
       61 ctctggtttt cggaggcaaa aatcgcagac acatctcagg tggaaacctc tgcccgttat
      121 ctggggaccg gcagtcagtg gagtgtatct ggcccgcaca ttaagcccgg gaaggatttc
      181 tggttttacg tgcgcagcgt caacctggtg gggaaatctg cttttgtgga ggccagtgga
      241 cgggccagca atgatgcaga agggtatctg gggctgtttc gggaaaaaat aggaaaactg
      301 catctggctc aggggctgtg ggagctgata gacaacagcc agcttgcgga tgagatggcg
      361 gagatgaaga ccaccatcac cgaaacccgc aatgaaatca cacagacggt cagtaaaacg
      421 ctggaggagc agagcgccac catacagcag atacagcgcg tgcagaagga cacaaatgat
      481 gaccttgctg cactttacat gctgaaggta cagaaaacaa aaaatggcat accctatgtt
      541 gccggtattg gagcggggat tgaggatact gatggccagc ccctgagcaa catactgctg
      601 ctggctgacc gtattgcgat gattaacccg gaggacggca acaccacgcc gttatttgtg
      661 gcgcagggga atcagttgtt catgaacgat gtgttcctga agcggctgtt tgcggtgagt
      721 atcacctcgt ccggcaatcc cccgacgttt tccctgacgc cggagggcag gctgaccgca
      781 agaaatgctg atatcagcgg taacgtgaat gcgaactccg ggacgctcaa caacgtcacg
      841 attaacgaga actgccgggt tcttggaaaa ctgtccgcga accagattga aggcgatctc
      901 gttaaaacag tgggtaaggc ttttccgcgg gactcccggg caccggagcg gtggccatca
      961 gggaccgtta ccgtcaggat ttatgacgat cagccttttg accggcaaat tgttattccg
     1021 gcggtggcat tcagcggcgc taagcatgag agagagcata ctgatattta ctcctcatgc
     1081 cgtctgatag tgcggaaaaa cggtgctgaa atttataacc gtaccgcgct ggataatacg
     1141 ctgatttaca gtggcgttat tgatatgcct gccggtcacg gtcacatgac gctggagttt
     1201 tcggtatcag catggctggt gaataactgg tatcccacag caagtatcag cgatttgctg
     1261 gttgtggtga tgaagaaagc caccgcaggc atcagtatca gctgaatttt ataacccata
     1321 tacgggcgcc agaaatggcg ccttttttat tgcagaaaag cgagaggtaa ttatgcgtaa
     1381 agtttgtgca gccattttgt ccgcagccat ctgtctgtcc gtatccggtg cgcctgcatg
     1441 ggcgtctgaa catcagtcca cactgagcgc ggggtatctt catgcccgta cgaacgctcc
     1501 cggcagcgat aatctgaacg ggattaacgt gaaataccgt tatgagttta cggacgcgct
     1561 ggggctgatt acgtccttca gttatgccaa tgctgaagat gagaaaaaaa cgcactacag
     1621 cgatacccgc tggcatgaag attccgttcg taaccgctgg ttcagcgtaa tggcggggcc
     1681 gtgaatgaat ggttcagcgc gtatgcgatg gcgggtgtgg cttacagccg tgtgtcgact
     1741 ttctccgggg attatctccg cgtaactgac aacaagggga aaacgcacga cgtgctgacc
     1801 ggaagtgatg acggtcgcca cagcaacacg tctctggcgt ggggggctgg cgtgcagttt
     1861 aacccgaccg aatccgtggc cattgatatt gcttatgaag gttccggtag tggcgactgg
     1921 cgcactgacg gtttcatcgt gggtgtcggc tataaattct gattagccag gtaacacagt
     1981 gtcatgacag cccgccggtt caggcgggct tttttgtggg gtgaatatga cagtaaagat
     2041 ttctggtgta ctgaaagacg gcacaggaaa accggtacag aactgcacaa tccagctgaa
     2101 agcaaaacgt aacagtacca cggtggtggt gaacacgctg gcctcagaaa atccggatga
     2161 agccgggcgt tacagtatgg acgttgagta tggtcagtac agcgttattc tgttggtgga
     2221 gggattcccg ccgtcacatg ccgggactat caccgtgtat gaagattctc aacccggtac
     2281 gctgaatgat tttctcggtg ccatgacgga ggatgatgcc cgtccggagg cactgcgtcg
     2341 ctttgaactg atggtggaag aggtggtgcg taacgcagag gaggcgaaga agaatgccgg
     2401 agaggcggag acgtcagcga ggaatgccgg catatcagcc agtcaggcag aagagagcgc
     2461 tgcaaatgct gacacttcag caggggatgc atcggagtca gcccggcagg cggcagaaag
     2521 tgcagcctca gcaaagcagt cagaggaggc gtcctcgtcc tcggcctctg cggccgctca
     2581 aaaagccagt gagtcattac aaagtgcaac agatgctgag ttgtcaaaaa agacggcaga
     2641 aagtgcagcc ggtaatgcag tcagggatgc aacgaccgca acagaaaaag cccgggagtc
     2701 aacagaaagc gcacagtcag cggaacaaag caggatagcg gcggaagagg ccgtaaaccg
     2761 aatccccacc gtggtgggac ctcccgggcc aaagggggaa ccggggcccg cgggtcctca
     2821 ggggccgaag ggagacacag gagcccccgg gcaaggaaca gaactgctta ctactgccaa
     2881 tacatggact caggcacaaa cttttaatgg tggtattaat ggcaatttga cggtgaccgg
     2941 aaacggctca tttaacgata ttcagatccg ttcggataaa cgcaacaagc gaaatctggt
     3001 aaaactggat aatgcgttag atcgtctgga ggcacttact ggttatcttt acgagataca
     3061 gtactctgcc gacggttggc aaacgtcggt tggtttaatt gctcaggatg cacaaaaagc
     3121 attgcctgaa ctggtaactg aagacgcaga cgttatatct ggtgaaaaac gtctgcgtct
     3181 taactacaac ggcataattg cattgttagt cgagggcttt aaaacacttc gtcatgagat
     3241 taaagaactc cgggagaagt aaacgacagc tgttgtagtt tctggtttct actgaattta
     3301 aattgtgggg tgacactcac cccacgcatt cagaaggggg agatgagatg ggggtaacat
     3361 cgggatgggt aggctcttcg gctaagagcg aaacaggtga gcagtggatg ggagccgccg
     3421 gaaccaaact gggactgagt aaacctttta tgatgagcca aatggttggg cgaactatgg
     3481 gctgtaaaat tgcaactgag tactataaat ggaaatcctc tgacaaggtt gataactggg
     3541 gcgcagttgg cgctgactgg cctttagaag aaaaaagtaa aggtacaatt acaaacgccg
     3601 caagctgcgg atcagggagg ctggtagggg ctgtcgttac actttctcac tttttgacga
     3661 actctacacc gacagctgct gtttatttag ccggtggtaa agcaggtaat atcaccgtaa
     3721 acgtaggtgg tgctacacaa accatgattt atcagggcgt tgttagtggg ttccagtatt
     3781 actggtcagg ttctgttagt tccgctttcg tggaggcaat gaaaaagacg ggagtacccc
     3841 aggatctaaa aattagttaa atggtaaata aataatttta aaaacttcac gttctacata
     3901 ccggagacgc cggatatata ggatattgtt ttaagttgcc agagaaattt ttccggacgg
     3961 atgctgataa taatgatgtg ccaatgacgg cagcatcatg gatggcactg agtgaagcga
     4021 cagagcaggc gatgtttgcg aagggagtgg agattaatac acggcagttg cagatgaaag
     4081 ccgaggttga ggcgctgaca gacctgaagg cgatccgcag ttatgttgtc ggatggcctg
     4141 ctggctgaat aaaaaaacgg gaccacgacc agtcccggaa ccatgagttt tagggtatta
     4201 gtttgttatc atagttagcg tgctaagtat gccatgtcag gttgattagt gaagtgatgt
     4261 tgttcgcatt tttgcacggc ggagaatatt cagatttttg gaaatccata tttttcccgt
     4321 gcgcgattac atgcttcatt tacgatgcta ttttcgccgg acattgcgaa ttccctgcat
     4381 gtggacggtt tttgtaaaca gagcaatatg cgttttctcc gggggggccg gcaagagcgc
     4441 cacatcgggg atttttctga ttggtgccgc gcatacagcg atgaaaagga gatatttgct
     4501 cagtgagact gaccgaaacc tttccgccag catcgtcagc ttctgcccag taaaaagaga
     4561 cgcggaaaat gcacaacagg caccacacgt catgcatgga ttcagattgc tcataattca
     4621 ccagtacagc tataaatcgt aaagagaaca gcggtacatc gtatgtaaga acgtaccgcg
     4681 gctggctggt gaacttccga tagtgcgagt attgaatgat ttccagccgt tacagatttt
     4741 acgtgctaat tagtgaacaa accactcgtc agcagactcc caggtatctt tcagagtttc
     4801 ctgaacaaaa gttttagctg aatctttatc ggcggtgcgc gtaacagaaa ggccatcgtt
     4861 gctggtagct tttacgatca cctctacatc gtcataacgt ttactgatgc gtcgggttaa
     4921 ttcttccttt aacgcatcca cagcaccggt tggcatttta gtcatttttt ctttggctat
     4981 gcagatttca atacgcataa aagtccctct acactgtgtt tgtatacagt atcattttta
     5041 actgtatgga taaacagtat caagggtgaa ggaaagtgat tttttggggc atgcatgggg
     5101 caaaaatatt tgttgtgggg cattttgggg catgattggg acactttgtt acatatgaac
     5161 tttgccgatt tttatatgac atggaaatac aacgctttga ttcttctaaa taaaaaacat
     5221 gctcttgggc gttctttagt gatttttaaa aattccgtat cacgcagtta aagtggcggg
     5281 catactcttc aaggctggtg atcccca
//
LOCUS       DADMHC010000229         5293 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.232, whole genome shotgun sequence.
ACCESSION   DADMHC010000229 DADMHC010000000
VERSION     DADMHC010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5293)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5293)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5293
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.232"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            60..710
                     /gene="inaA"
                     /locus_tag="JNZ57_003651"
                     /pseudo
     CDS             60..710
                     /gene="inaA"
                     /locus_tag="JNZ57_003651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416740.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide kinase InaA"
     gene            complement(764..1018)
                     /gene="yfaE"
                     /locus_tag="JNZ57_003652"
     CDS             complement(764..1018)
                     /gene="yfaE"
                     /locus_tag="JNZ57_003652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-like diferric-tyrosyl radical
                     cofactor maintenance protein YfaE"
                     /protein_id="HAY8829715.1"
                     /translation="MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGS
                     CRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM"
     gene            complement(1018..2148)
                     /locus_tag="JNZ57_003653"
     CDS             complement(1018..2148)
                     /locus_tag="JNZ57_003653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006683700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase 1 subunit
                     beta"
                     /protein_id="HAY8829716.1"
                     /translation="MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQ
                     LSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISI
                     PELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDE
                     LIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFA
                     FAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDL
                     FVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIP
                     WINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL"
     gene            complement(2295..4580)
                     /gene="nrdA"
                     /locus_tag="JNZ57_003654"
     CDS             complement(2295..4580)
                     /gene="nrdA"
                     /locus_tag="JNZ57_003654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HAY8829717.1"
                     /translation="MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELR
                     SHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPAL
                     YDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNR
                     VTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP
                     TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHT
                     GCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMD
                     YGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQR
                     VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLN
                     DVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAM
                     GRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP
                     WFNETTYAKGILPIDTYKKDLDAIANEPLHYDWEALRESIKTHGLRNSTLSALMPSET
                     SSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLV
                     GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAED
                     AQDDLVPSIQDDGCESGACKI"
BASE COUNT         1303 a         1257 c         1376 g         1357 t
ORIGIN      
        1 ttttcctcag gtaaccacct atagtcattg tcgttaataa aaacgacagg cgatagggta
       61 tggcagtttc agcaaagtac gacgaattta atcactggtg ggcaacagag ggcgactggg
      121 ttgaagagcc taactatcgc cgtaatggta tgagcggggt gcaatgcgtc gagcgcaacg
      181 gcaaaaagct gtatgtaaag cgcatgacgc atcatctgtt tcattctgta cgttatccgt
      241 tcggccgacc aacgattgtc cgtgaggttg cggtaattaa ataactggaa cgggccggtg
      301 tcatcgtgcc taagatcgtt tttggtgaag cggtgaaaat tgaggatgaa tggcgagcgt
      361 tgctggtgac tgaagatatg gcggggttca tcagcattgc tgactggtat gcccagcatg
      421 cagtatcgcc ttattctgac gaagtacggc aagccatgtt gaaagcagtg gcgctggcgt
      481 ttaagaaaat gcatagcatt aatcgtcagc atggctgttg ttatgttcgc catatctatg
      541 tgaaaacaga aggtaaggca gaagctggtt ttcttgacct ggagaaaagt cgtcgccgct
      601 tgcgtcgcga taaagcgatt aatcatgact tccgccagct ggaaaaatat ctggagccaa
      661 tccccaaagc ggactgggag caggtgaaag cgtattacta cgccatgtaa tcgttgtagg
      721 ccagataaga cgcataagcg ttgtatctgg cactacaacc aattcacatc tcgatttcaa
      781 tatcgccttt tgcccggcaa caacagggca aaatttcccc cggctgaata aaggctaacg
      841 gttcggcaat ccagtcaact tgacctgcaa ccaggcgtgt gcgacaggag ccgcagtaac
      901 cttcgcgaca ctggtactca accgccacat tgtgggattc cagcgctgcc agaagggaag
      961 ggtgttcatc ctggcacagc agttgtgtgc cagtgatgcg cagggtaacg cgggccatca
     1021 gagctggaag ttactcaaat cgtcggtgtc cacttccgag tcaatctgcc cgaccagata
     1081 agaactgact tccacttcct gcggagcaac ctgcacgtta tcagacacca gccaagtgtt
     1141 gatccacggg atcgggttgg agcgcgtctg gaacggcaga tccaaaccga ctgcctgcat
     1201 acggatattg gtgatgtatt caacgtactg gcagagaatg tctttattca gaccaatcat
     1261 cgaaccgtcg cggaacagat aatccgccca gtctttctcc tgttgagctg cctgaacaaa
     1321 caggtcatag cactcctgct tacactcttc ggcaatttcc gccatctcag gatcgtccgc
     1381 gccgctgcgc agcagattca gcatatgctg ggtgccggtc aggtgcaggg cttcgtcgcg
     1441 ggcaatcagg cgaataattt tggcgttgcc ttccatcaat tcgcgttctg caaaggcaaa
     1501 ggaacaagca aagctgacgt agaagcggat cgcttccagc gcgttaacgc tcatcaggca
     1561 aagatacagt tttttcttca gctcgcgcag gctaacggtt acggttttac cgttaacggt
     1621 gtgggtgcct tcgcccagaa ggtgccagta gctggtcatt tcgatcagtt catcgtaata
     1681 gctggagatc ccttccgcac gtttctggat ctgctcgttg gtgacgatat cgtcaaacac
     1741 aacagacgga tcgttaacga tattacgaat gatatgagta taggaacggg aatgaatcgt
     1801 ttctgagaac gcccaggttt cgacccaggt ttccagttcc ggaatagaaa taagcggcaa
     1861 tagcgccacg ttcggactac gaccctgaat ggaatccagc agcgtctgat atttcaggtt
     1921 gctgataaaa atgtgttttt cgtgctccgg cagcgcctgg taatcgatac ggtcgcggga
     1981 gacgtcaact tcttccggac gccagaagaa agagagctgc ttttcgatca gcttttcgaa
     2041 gatgtcatat ttttgctgat cgtagcgggc cacgttgacc ggctgaccaa agaacatcgg
     2101 ttctttgagc tgatcatttt tcgtctgtga aaaggtggta tatgccatga gtgtgtcctg
     2161 ttgggagttt aatgccggat aaggcatttt acgccgcatc ctgtgcctga tgcgacgctg
     2221 gcgcgtctta tcaggcctac aaatccgagc cgtaggccgg ataaggcgtt cacgctgcat
     2281 ccggcatctc aatatcagat cttacatgcg ccgctttcgc agccatcgtc ctggattgac
     2341 ggtaccagat cgtcctgcgc gtcttcagcg ccgtcacggg tgttctgata atacagcgtt
     2401 ttgaccccga atttgtaggc ggtgagcagg tctttcagca actgctgcat cggcactttt
     2461 cctgacggga aacgtgacgg atcgtagttg gtgttagcag agatcgactg atcgataaat
     2521 ttctgcatga tacctaccag ttgcaggtag ccatcgttac ccggcatttc ccacagcagc
     2581 tcataggcgt cgtgcaggtg ctcgtagtcc ggcaccacct ggcgcaaaat accgtctttc
     2641 gacgctttga tgctgacgta accgcgcggc ggttcaatac cgttagtggc gttagagatc
     2701 tgcgaagagg tctcggacgg catcagggca gaaagcgtgg agttacgcag gccgtgcgtt
     2761 ttgattgatt cacgcaatgc ttcccagtcg taatgcagcg gctcattagc gatggcatcc
     2821 agatctttct tataggtatc gatcggcagg atccctttcg cgtaagtggt ttcgttaaac
     2881 cacgggcacg cgccttgctc tttagccagc tcattagacg ctttcagcag gtaatactga
     2941 atcgcttcga aggttttatg cgtcaggttg ttggcgctgc cgtcggagta gcgtttaccg
     3001 tgcttcgcca ggtagtaagc gaagttgatc acaccaatac ccagcgtacg acgacccatc
     3061 gctccacgtt tggcggccgg gatcgggtaa tcctgataat ccagcagcgc gtcaagtgca
     3121 cgaaccgcca gaattgccag ctcttccagt tcatccaggt tattaattgc gcccaagttg
     3181 aaagcagaca gcgtacacag cgcgatttca ccgttctcgt cgttgacgtc gttcagcggt
     3241 ttggtcggca gggctatctc caggcacagg ttagactgac gcactggcgc gatggccgga
     3301 tcaaacgggc tatgggtatt acagtggtca acgttctgaa tatagatacg accggtagac
     3361 gcacgttcct gcatcatcag cgagaacagc tcaacggctt tcacacgctg cttgcggatg
     3421 ctgtcgtctt tctcatattt ggtatacaga cgttcaaact cttcctgatc ggcgaagaac
     3481 gcgtcgtaca gccccggtac gtcggacggg ctgaacaggg tgatatcttc acctttcagc
     3541 agacgggtat acatcagttt gttgatttgt accccgtagt ccatatgacg cacgcggttg
     3601 ccttccacac cacggttgtt tttcaacacc agcaggcttt ccacttccag atgccacatc
     3661 gggtagaaca gcgttgccgc accgccgcgc acaccgccct gagagcagga tttcaccgct
     3721 gtctggaaat gtttgtagaa cggaatgcag ccggtatgga acgcttcacc accgcgaatc
     3781 gggctaccca gcgcacgaat acgcccggcg ttgatgccga tcccggcacg ctgggaaacg
     3841 tatttaacaa tcgcgctgga ggtggcgttg atggaatcca ggctgtcacc gcactcgatc
     3901 agtacgcagg agctgaactg acgagtcggg gtacgcacgc cggacatgat tggcgtcggc
     3961 agcgaaattt taaatgtgga aaccgcgtcg taaaaacgct tcacatattg caggcgcgtt
     4021 tcacgcgggt agttcgagaa caggcacgcg gcaaccagaa tataaaggaa ctgggcgctc
     4081 tcatagattt cgccggtcac gcggttctgt accagatatt tgccttccag ctgcttaacg
     4141 gcagcataag agaaggtcat atcacggtcg tgatcgataa acgtgtccat ctgcttgaac
     4201 tcttcttccg tgtagtcttc cagcagatga ttatcgtatt tgcccatctc gaccattttc
     4261 accacgtggt cgtacagcgc aggcggctca aactggccgt aggctttttt acgcaggtgg
     4321 aagatcgcca ggcgcgcggc gagatactga taatccggcg catcacggga gatcaggtct
     4381 gcggcagcct tgataatggt ttcgtggatg tcagaggtct tgataccgtc ataaaactga
     4441 atgtgggagc gcagctcgac ctgggaaatc gaaacgttat gcagtccttc tgccgcccaa
     4501 tccagaacgc gatggatttt gtcgagattg atgcgctctg tgctaccgtc gcgctttgtc
     4561 accagcagat tctgattcat gtatgtcgta cctgtttttg gaattctttc cgcaatagtt
     4621 tcatgcagac tacctgtagt acgggaagct gcttagaaca ctatatatag ggggtatgtt
     4681 tgggattcac tgcaagatag tgtgaaaatg gccctcttgc aagtgcataa ctttgtggat
     4741 aactcaggaa ggaaaaagtg gctttcgcgc accttaggtc agacaaggtg tccgggaaag
     4801 tcaatgggaa gagaaaaatt tgttaaaaat aactgttcgg cgatttcttg aacggcagaa
     4861 taggttggat aaattgatat agatggttta ttaatctttt tgctaatgat tgcaaaaatt
     4921 gatctaagca cgagtcatca cataatctga tgtatcagtt gtggtcaata tataagcgaa
     4981 tgtaagcgat tgttgatgtc gaaatggttg ttttctattc ggttattgtt aaatgcgaag
     5041 ccattttgtt aatttacctt atattataaa aaaattattc attactttaa tttagtttaa
     5101 atataactgg tatcccttaa ggttattaac ttgaattatg acgcactgat attattcatc
     5161 aaataataac aaaatagcca ttgcatcggg ttggacaatt tacaaaagaa agataaccca
     5221 tattgtataa tgcgtttaaa tatgccgtct tatataaaat gatggtcaga ttaatatgcg
     5281 gattatcttt cta
//
LOCUS       DADMHC010000230         5259 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.233, whole genome shotgun sequence.
ACCESSION   DADMHC010000230 DADMHC010000000
VERSION     DADMHC010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5259)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5259)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5259
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.233"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(1..246)
                     /locus_tag="JNZ57_003655"
                     /pseudo
     CDS             complement(1..246)
                     /locus_tag="JNZ57_003655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(586..1140)
                     /locus_tag="JNZ57_003656"
                     /pseudo
     CDS             complement(586..1140)
                     /locus_tag="JNZ57_003656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3-like element IS3H family transposase"
     gene            1283..1405
                     /locus_tag="JNZ57_003657"
                     /pseudo
     CDS             1283..1405
                     /locus_tag="JNZ57_003657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(1667..2233)
                     /locus_tag="JNZ57_003658"
     CDS             complement(1667..2233)
                     /locus_tag="JNZ57_003658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858157.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829718.1"
                     /translation="MLGTSFNNFGISLSHKRYFSGKVDEIIRCTMGKRIVKISSTKIN
                     TSILSSVSEQIGENITDWKNDEKKVYVSRVVNQCIDKFCAEHSRKIGDNLRKQIFKQV
                     EKDYHISLDINAAQSSINHLVSGSSYFKKKMDELCEGMNRSVKNDTTSNVANLISDQF
                     FEKNVQYIDLKKLRGNMSDYITNLESPF"
     gene            complement(2515..2829)
                     /locus_tag="JNZ57_003659"
     CDS             complement(2515..2829)
                     /locus_tag="JNZ57_003659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829719.1"
                     /translation="MLQRQRGKVGFAQLPVDFVAIEPDSVQGVGKRANLTNRCFIIRI
                     NDSFKKRQGFIEFISNSGSGHTVTVYTKRRFQRGVFMNSLNTNVVKPVMYRLRSSADA
                     RP"
     gene            complement(2907..3017)
                     /locus_tag="JNZ57_003660"
                     /pseudo
     CDS             complement(2907..3017)
                     /locus_tag="JNZ57_003660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            complement(3341..4018)
                     /gene="ospD1"
                     /locus_tag="JNZ57_003661"
     CDS             complement(3341..4018)
                     /gene="ospD1"
                     /locus_tag="JNZ57_003661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspD1"
                     /protein_id="HAY8829720.1"
                     /translation="MSINNYGLHPANNKNMHLIIGSNTANENKGMKRNIINVTNTAIS
                     HAINEEKSGGGYSGVSFRKLAKIQSISIPTKNNKEYNRHNLFSLIWHGNADAARKYGE
                     SLLAAEIPKEEKLEVLAARNNAGESALFIALQEGHSAAIQAYGDFIKTFDLSPKETIK
                     LLDVRDNEGLPGLFLAAGKGNIEAMMAYINICHHSGIKLTEIADRLNNNEQDMFNIIS
                     DKIQELF"
     gene            complement(4388..4525)
                     /locus_tag="JNZ57_003662"
                     /pseudo
     CDS             complement(4388..4525)
                     /locus_tag="JNZ57_003662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011787828.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            complement(4607..4905)
                     /locus_tag="JNZ57_003663"
                     /pseudo
     CDS             complement(4607..4905)
                     /locus_tag="JNZ57_003663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343747.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         1441 a         1127 c         1043 g         1648 t
ORIGIN      
        1 tcattaccat gacggtattg atgccgattt tcagcgtacg ggcagtatcg cgaactccgg
       61 caccgttgaa gccatttcag tgatttggtt tttaactccc ggtttacggg cctcgtaaca
      121 gtaagtgagc tgaaacaccc ggtgacagtc acggcaacgg aatcgatcat gtccttttgg
      181 gttctgcccg tgacggtaaa cctgaacgga ctggcaacgg gggcaatgaa agttaactgt
      241 gaccatgaaa gaaccttaaa agcgggtatt ataaccccta attcaactaa ttggaggcat
      301 tgtcattttt aatctatgga tacacttaaa aatcctctca ccttacgtta aaaaccttct
      361 catgtttaga gttttttatt atgtttatca taatgatatg acgatctgag tttttaaaat
      421 caagaagaaa agataagttt tttaaatgca cagtgcctgt ggataacttt gcgtaaatcc
      481 ggaggacaga tcactctgaa gcaagacaac agcatctgaa aacaatatgc tcacgtttca
      541 accacagggc gtaagtgatc ctacccacgt aatatggaca caggcctaag cgaggttctg
      601 gttttcaaat tgttccggac tgaggccgcc acaccaactg tgccgtcgcc agcgattgta
      661 atcacattcg atataattaa acactgttgc ccgcattatt tcccggctga taaagtgttc
      721 tccgtggaga cattccactt tcagcgaatg aaagaagctt tccacgcagg cattatcgta
      781 gcagcagccc tttgcgctca tactgccacg cagattatgc cacttcagca gcgcctgata
      841 atctgctgaa cagtactgac ttcctcggtc cgagtgaacg ataacgttcc ggggtctctt
      901 acgccgccac agcgccatct gcagggcatc gcaggccagt tgcgccgtca ggcgtggtga
      961 catggaccag ccaataacgg cacgtgacca caggtcaatg accacagcca gatacagcca
     1021 gccttcatct gtacgtaagt acgtgatgtc tcccgcccac ttctggttcg gaccactggc
     1081 gtaaaaatcc tgctccagca gattttctga cacaggcagg ccatgtgcgc ggtaactgac
     1141 cgtattgctg ggtaagatca atttgctcac tggtatttac tacgtgcatc gaatgagtga
     1201 tcaagagccg tatgacgcga gagtgtcacg tacggttccg tgagcagccg gagagtgaaa
     1261 ctctctccgg ctgactcgac tcgcaggttc cgacagcggt gacgaacatg cagcggtgtt
     1321 gttctcgctg atcggcacat gccgtctgaa caatgtggag ccagaaaaat ggctgcgtta
     1381 cgttattgaa catatccagg actgaccggc aaaccgggta cgcgatctgt tgccttggaa
     1441 agttgatctg acttctcagt aaatatcaat atgattctga cgagccgctt acctttgagc
     1501 agagaaaggg gagagggatc ccacatccat gagctaggaa aatacaaaaa ctggctatac
     1561 aacaattcaa tatattagga cttacttgcg aggagaaata tagcaccgct caggcaattc
     1621 ctgggtattt acttttctta gtttctttac tcgggatgtt ctgtcatcag aaaggcgatt
     1681 ctaaatttgt aatatagtca ctcatattcc cacgtaattt ctttagatca atatattgca
     1741 catttttctc aaaaaactga tcggaaataa gatttgcaac attgcttgtt gtatcatttt
     1801 taacgcttct attcatccct tcacaaagtt cgtccatttt ctttttgaaa taactgcttc
     1861 ctgatacaag atgatttatg gaactttgtg cagcattgat gtctagagaa atgtgataat
     1921 ctttctcaac ctgtttaaat atctgtttac ggagattatc gccgattttt cggctgtgtt
     1981 ctgcacaaaa cttatcaata cattggttta ccacccggga tacgtagact tttttttcat
     2041 catttttcca atctgtaata ttttcaccga tttgttctga aacagagctc aaaatactag
     2101 tatttatttt ggttgatgat atttttacta tccttttccc cattgtacag cggataatct
     2161 catcaacctt tcctgaaaaa tatcttttgt gagataaact gattccaaaa ttattaaaag
     2221 atgttccaag cattataatc actttgtcat gtaaaatagt aacattgtca ttattttagc
     2281 tgattcaaac aattctgtaa atgctttgag ttctttactc ccttggctca atgatggacc
     2341 gtctggaatc ccagagacta aactctctga gaaagagagt atgaaaaaac ttggggcagt
     2401 ccctaaatga agggaccaac agcggtaaaa taaccggcat cattcataat gatgccctgt
     2461 tagttgtagt tatgaagatt tacgtcatta aaattgctgt tcgtagtgtc agtcctatgg
     2521 tctggcatca gctgaggatc gtagccgata catcactggc ttcacgacat tcgtgttgag
     2581 gctattcatg aaaactccac gctgaaaacg ccgttttgta taaacggtca cggtatgccc
     2641 ggagccactg ttgctgatga attcgataaa accttggcgt ttcttgaagc tatcgttaat
     2701 gcggataatg aaacaacgat tggtgagatt cgctcttttg ccgacaccct ggacgctgtc
     2761 cggttcaatc gcaacaaaat caaccggcag ctgagcaaac ccaaccttgc ctctctgacg
     2821 ctggagcatg aagtgattta gctgggacgt agccactgac agcttctata aaagtatgat
     2881 cctacccacg taatatgaac acaggcttaa gtgaggttct ggttttcaaa ttgttcagga
     2941 ctgagacctc cacaccaact gtgccgtcgt cagcgattgt aatcgcactt gatataatta
     3001 aacactgtat atttcatttg tggagtctcc agtctgaggg ggctttatgc attccgtatt
     3061 gggcactatg atgccagaaa tctgcaaggc tccacacctt cctgtatttc ccttcctcta
     3121 tcacagtgca ctttacttaa tagggtggga tgtgttcatt acatttattg tgttttttat
     3181 gattgttttt gcgtccagtg tcgttcgtca tgggaaactg gttctatggg tagtatcgct
     3241 cagtctagtt aactgtttgt ttctttttag aaattaagca gatcacacaa ttcggggaga
     3301 gatccttcta agtgcaattc tttgcagcta tttagcacac ttaaaacaac tcttgtattt
     3361 tgtcagaaat aatattaaac atgtcttgtt cattattgtt aagtctgtct gctatttctg
     3421 taagttttat cccactatga tggcatatat ttatatatgc catcatagcc tcgatattcc
     3481 ctttccctgc ggccagaaat aatcctggta acccctcatt atctcttaca tccaatagtt
     3541 taatcgtttc ttttggtgat aaatcaaaag ttttaataaa atctccataa gcttgaatcg
     3601 cagcggaatg accttcttga agagctatga acaaagcaga ttccccagca ttatttcgtg
     3661 ctgcaagaac ttctagtttt tcctctttgg gtatttcggc tgccaacagc gattcaccgt
     3721 atttacgcgc tgcatcggca tttccatgcc aaatcaatga aaacaaatta tggcggttat
     3781 actccttatt attctttgtc ggaatggata tgctctgtat tttggccaat tttctgaaag
     3841 aaacaccact atatcccccc cctgattttt cttcattgat ggcgtgggat atagcggtat
     3901 ttgtcacgtt aatgatatta cgtttcattc ctttattttc attagcagta ttgctgccta
     3961 ttattaggtg catatttttg ttgtttgctg gatgtaatcc atagttattt attgacattt
     4021 ttgttcatcc tttttgctaa aaaaaacaat aacctatttt tgtaatgtaa tagatattag
     4081 tctattgcta atctaaaaaa accattgcca cattgaatgg ctatattcac caataaattc
     4141 tttcgatttc gtatattgac atatcgtaga tatatcttat ccctaagatt caataatcga
     4201 gtccgtttac cattctgtgc aagcgccttc actcagaagt gaccgtcaag gcgatcacca
     4261 aacttgataa taaagcagct cattgccata cgccagtcct taggggcgtt gtccatttct
     4321 gtgatgctgc ctagatttaa ctgccagctc cggcttatct acatctaaat atgtgagcct
     4381 aataccgcta cactttggcc agactatgtt tttctccggg aagtgggcta accgtctcca
     4441 taaagtgacg aacttttttc aacagtggcc atattgaacg gcactgatga ttacgggtta
     4501 ttgtctcatg aagagccggc cacatcactg acagcagtga cttcaggcct tcagcaccag
     4561 acagcctgaa ccagttaatc catcgcccga cagatttagt aatctagggc tggtttttct
     4621 tcagctgttg cggttcgaaa gtaccattac gatcacgcag agtacggatt tccagaggtt
     4681 catctccagt agtgataatc ttcgttaagc aaccattgcg ggaattgctg ccagatctaa
     4741 gctgattttt ctcgcaccca agatgatgag tcatattagc attgagtacg gtttcatttt
     4801 cagcatccaa tcaaactgac tgagatcttc aggatttttg agacttttgg ctagttcatt
     4861 agctaaagcc cgcaacttat tagatgtcaa ctgtttttca ttcataaatt caccttcatt
     4921 tgatatcaaa ttaaatagtt caacatcaga gaattataca aacttatgta caggctccta
     4981 tgatcttcga atcctgaaga ttatagtgaa aataagtttt cacgttgaaa tcccacatag
     5041 ttagtatatg ataaataatc atggatgacc tgattaacct cttggggtag tgcttttata
     5101 gaagaataaa tattctacta atttaataca tcacctaaaa tagtattgtt ttttatggtt
     5161 ggttgaaggt cgtggtgatg atgttagtcc ttttgagaat attccagtgc cagatcttac
     5221 ttataataaa ggggcttggc agtttggata aactattgt
//
LOCUS       DADMHC010000231         5213 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.234, whole genome shotgun sequence.
ACCESSION   DADMHC010000231 DADMHC010000000
VERSION     DADMHC010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5213)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5213)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5213
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.234"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..576)
                     /locus_tag="JNZ57_003664"
     CDS             complement(<1..576)
                     /locus_tag="JNZ57_003664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000824385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HAY8829721.1"
                     /translation="MKRKVLAMLVPALLVAGAANAAEIYNKDGNKVDFYGKMVGERIW
                     SNTDDNNSENEDTSYARFGVKGETQITSELTGFGQFEYNLDASKPEGSNQEKTRLTFA
                     GLKYNELGSFDYGRNYGVAYDAAAYTDMLVEWGGDSWASADNFMNGRTNGVATYRNSD
                     FFGLVDGLNFAVQYQGKNSNRGVTKQNGDGYA"
     gene            1143..1508
                     /locus_tag="JNZ57_003665"
     CDS             1143..1508
                     /locus_tag="JNZ57_003665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416472.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HAY8829722.1"
                     /translation="MEKCDFYHIIVLSLNFPDYLKMEYGSTKMEERLSRSPGGKLALW
                     AFYTWCGYFVWAMARYIWVMSLIPDAPVSGFESDLGSTAGKWLGALVGFLFMALVGAL
                     LGSIAWYTRPRPARSRRYE"
     gene            1548..2243
                     /locus_tag="JNZ57_003666"
     CDS             1548..2243
                     /locus_tag="JNZ57_003666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohydrolase"
                     /protein_id="HAY8829723.1"
                     /translation="MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADD
                     DVDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREEFEQFPAEKIEAVCH
                     VIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQ
                     HRPLDDKRYALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEG
                     VDHKVIDAFSPAG"
     gene            2310..3728
                     /locus_tag="JNZ57_003667"
     CDS             2310..3728
                     /locus_tag="JNZ57_003667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HAY8829724.1"
                     /translation="MQENISVTDSYSTGNAAQAMLEKLLQIYDVKTLVAQLNGVGENH
                     WSAAILKRALANDSAWHRLSEKEFAHLQTLLPKPPAHHPHYAFRFIDLFAGIGGIRRG
                     FESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHKEGVSDEAAAEH
                     IRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRP
                     AMFVLENVKNLKSHDQGKTFRIIMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHR
                     ERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYILTPVLWKYLYR
                     YAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEILIDRGWDMAKGEKDFDDP
                     LNQQHRPRRLTPRECARLMGFEAPGEAKFRIPVSDTQAYRQFGNSVVVPVFAAVAKLL
                     EPKIKQAVALRQQEAQHGRRSR"
     gene            3709..4179
                     /locus_tag="JNZ57_003668"
     CDS             3709..4179
                     /locus_tag="JNZ57_003668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="very short patch repair endonuclease"
                     /protein_id="HAY8829725.1"
                     /translation="MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDA
                     SLPGSPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDIS
                     RLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA"
     gene            complement(4168..5088)
                     /gene="yedA"
                     /locus_tag="JNZ57_003669"
     CDS             complement(4168..5088)
                     /gene="yedA"
                     /locus_tag="JNZ57_003669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="drug/metabolite exporter YedA"
                     /protein_id="HAY8829726.1"
                     /translation="MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRF
                     LAAGILLMAFLLLRGHKLPPLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVV
                     VATVPLFTLCFSRLFGIKTRKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSI
                     SWAFGSVYGSRITLPVGMMAGAIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYL
                     ALFGSIIAINAYMYLIRNVSPALATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVI
                     VFAVVLVTLGKYLFPAKPVVAPVIQDASSE"
BASE COUNT         1404 a         1242 c         1327 g         1240 t
ORIGIN      
        1 cgcatagcca tcaccgtttt gtttagtaac gccacgattg ctgttcttac cttgatattg
       61 cacagcaaaa ttcagaccat caaccagacc aaagaaatca gagttacggt aggttgcaac
      121 accgttggta cgaccgttca tgaagttgtc agcggaagcc caggaatcac caccccattc
      181 aactaacata tcggtataag ctgcggcatc ataagcaaca ccgtagttac gaccatagtc
      241 gaaagatcct aactcgttat atttcaaacc tgcgaaggtt aaacgggttt tttcctgatt
      301 agagccttcg ggcttgctgg cgtcgaggtt gtattcaaac tgaccaaaac cagtcagttc
      361 gctggtgatt tgggtttcac ctttaacacc gaaacgagca taggaggtat cttcgttttc
      421 gctgttatta tcatcagtat ttgaccagat gcgttcgcca accatcttgc cgtagaaatc
      481 aactttattg ccatctttat tgtaaatttc agccgcattt gctgcgccag caactaataa
      541 cgccgggacc agcattgcca gaacttttct tttcattatg tattcccttg tgattataat
      601 cttcatgaat atatcaataa gtgccgttat ccaaaaaaaa gcacatttgg atactattct
      661 atgaagttca ttttatttta agtgttacat gcaacaaatg tatttaaaag atttcaaaat
      721 gtttctaatc tatttaatgt aattcagaat tatgaattct aaatataaat attcatgaaa
      781 attataaatg tatatcaata tgttatgagt tgagcggaaa catagggggt atcaatgatt
      841 gttgcgccaa acggctggtg tgatcaggcg cacattaatg aaggcataaa aaaaagccgg
      901 catcatgccg gcccaaaaaa tataaacaag acgataaaag gctaataacg gaagcatcat
      961 gacacagaat aataaaaagg tataattgta atcagtgcta atatattgat taaatgaatt
     1021 aataaagccg atatcaaaga taaataaaat cgctcaaaac gatttttcct gtattcactg
     1081 ccgttgcgca aaatttatct atttgttcaa aaaatgattg agtcttgact ggctcatcca
     1141 atgtggaaaa atgtgacttt tatcacataa tagtactaag tctgaatttt ccggattatc
     1201 tcaaaatgga atacggttcg acaaagatgg aagagagact ctctcgcagc cctggcggca
     1261 aactggcttt gtgggctttc tatacatggt gtggctattt cgtctgggca atggcgcgtt
     1321 acatctgggt gatgagcctg atccccgatg cccccgtgtc gggatttgaa agcgatttag
     1381 gctctaccgc gggaaagtgg ttaggggcac tggtcggatt tttatttatg gctctggtcg
     1441 gggcattgtt aggcagcatt gcctggtaca cccgacctcg tcccgcacgt agcagacgct
     1501 atgaataaaa actgctaagg tggcgactct ttggcaacgg agcgcgtatg gacttacaac
     1561 actggcaggc acagttcgaa aactggttga aaaaccatca tcagcaccag gacgcggccc
     1621 atgacgtgtg tcattttcgc cgcgtctggg ctacggcaca gaagctggcg gcagatgacg
     1681 atgtcgatat gctggtgatt ttaaccgcct gttattttca cgatattgtg agcctggcga
     1741 aaaatcatcc gcaaaggcag cgttcttcaa tcctggcggc agaagagacg cgtcgcctgc
     1801 tccgtgaaga gttcgagcaa tttccggcgg agaaaatcga ggccgtttgt catgtcattg
     1861 ccgctcacag tttcagcgcg caaatcgccc ccttaacaac ggaagctaaa atcgtccagg
     1921 atgcggatcg gctggaagcc ctgggggcga ttggcctggc gcgcgtgttt gccgtttcag
     1981 gggcattggg cgtggcgctg tttgatggtg aagatccgtt cgcacagcat cgcccgcttg
     2041 atgataaacg ctacgcgctg gatcatttcc agactaagtt gctgaagcta ccgcaaacca
     2101 tgcaaaccgc aagaggcaag cagctggcgc agcacaacgc gcatttttta gtcgagttta
     2161 tggcgaagct cagtgccgaa ctggcggggg agaatgaagg tgtcgatcac aaggtgatag
     2221 atgcgttttc acccgcggga taagcgcgtg gccctaaatg gctgtaatta tgttaacctg
     2281 tcggccatct cagatggccg gttaaatcta tgcaggaaaa tatatcagta accgattcat
     2341 acagcaccgg gaatgccgca caggcaatgc tggagaaact gctgcaaatt tatgatgtta
     2401 aaacgctggt ggcgcagctt aatggtgtgg gtgagaatca ctggagcgcg gcaattttaa
     2461 aacgtgcgct ggcgaatgac tcggcatggc accgtttaag tgagaaagag ttcgcccatc
     2521 tgcaaacgtt gttacccaaa ccaccggcac atcatccgca ttatgcgttt cgctttatcg
     2581 atctatttgc cggaattggc ggcatccgtc gcggttttga atcgattggc ggacaatgcg
     2641 tgtttaccag cgaatggaac aaacatgcgg tacgcactta taaagccaac cattattgcg
     2701 atccggcgac gcatcatttt aatgaagata tccgcgatat caccctcagc cataaagaag
     2761 gcgtgagtga tgaggcggcg gcggaacata ttcgtcaaca cattcctgaa cacgatgttt
     2821 tactggccgg tttcccttgt cagccatttt cgctggctgg cgtatcgaaa aagaactcgc
     2881 tcgggcgggc gcacggtttt gcctgcgata cccagggcac gctgtttttt gatgtggtac
     2941 gcattatcga cgcgcgtcgt ccggcgatgt ttgtgctcga aaacgtcaaa aacctgaaaa
     3001 gtcacgacca gggtaaaacg ttccgcatca tcatgcagac gctggacgaa ctgggctatg
     3061 acgtggctga tgcagaagat aacgggccgg acgatccgaa aatcatcgat ggtaaacatt
     3121 ttctgccgca gcaccgtgaa cgcatcgtgc tggtgggttt tcgtcgcgat cttaatctga
     3181 aagccgattt tactctgcgt gatatcagcg aatgtttccc tgcacagcga gtgacgctgg
     3241 cgcagctgtt ggacccgatg gtcgaggcga aatatatcct gacgccggtg ctgtggaagt
     3301 acctctatcg atatgcgaaa aaacatcagg cgcgcggtaa cggcttcggt tatggaatgg
     3361 tttatccgaa caatccgcaa agcgtcacgc gtacgctgtc tgcgcgttat tacaaagatg
     3421 gcgcggaaat tttaatcgat cgcggctggg atatggccaa aggtgagaaa gactttgacg
     3481 atccgctgaa tcagcaacat cgtccacgtc ggttaacgcc tcgggaatgc gcgcgcttaa
     3541 tgggttttga agcgccggga gaagcgaaat tccgcattcc ggtttcggac actcaggcct
     3601 atcgccagtt cggtaactcg gtggtcgtgc cggtctttgc cgcggtggca aaactgcttg
     3661 agccaaaaat caaacaggcg gtggcgttgc gtcagcaaga ggcacaacat ggccgacgtt
     3721 cacgataagg ccactcgcag caaaaatatg cgcgcgattg ccacgcgtga tacggcgatt
     3781 gagaagcgcc tcgccagtct gttaaccggg cagggcctag cgtttcgcgt tcaggacgcc
     3841 agtctgcccg gaagcccgga ttttgtcgtt gatgaatatc gctgcgtgat atttacccat
     3901 ggctgcttct ggcatcatca tcactgctat ctgtttaaag tacctgcgac tcgaaccgag
     3961 ttctggctgg agaagatagg taaaaatgtt gaacgcgatc gccgcgatat cagtcgtttg
     4021 caggaactcg gctggcgcgt actgattgtc tgggagtgtg cattacgtgg gcgcgagaag
     4081 ctgacggatg aagcgcttac cgagcgtctg gaagagtgga tctgcggcga aggtgccagc
     4141 gcgcagatcg acacgcaggg gattcattta ctcgcttgat gcgtcctgaa taactggcgc
     4201 aactacgggt tttgccggga agagatattt tcccaacgtg accagtacca ccgcgaagac
     4261 aattacgccg agcgccagcc attcaatctt cgacagcgtc tctccgccca gtcccgtacc
     4321 cagcaagacc gcgaccaccg ggttaacgta ggcgtagctg gtggcgagag ccggactgac
     4381 attacggatt aaatacatat aagcgttgat ggcgataatc gaaccaaaca gcgccagata
     4441 gccgaccgca aggaagcctg aaagggaagg gagcgccgtc agtttttcac ctgcaatcat
     4501 cgacgcgatc attaacacca cgcctgccgc cagcatctca atcgcacccg ccatcatccc
     4561 tacaggtaag gtaatgcgcg agccataaac cgagccaaac gcccagctaa tcgagccgat
     4621 taaaatcaga atcgcgcccc acggattgcc gcttaaattt ccaccgctat tgagcatgat
     4681 gattccggca agcccaatgg cgatacccac ccattccaat ttgcgcgttt taatgccaaa
     4741 caggcggctg aagcacaggg taaagagggg cacggttgca accacaacgg cggcgatgcc
     4801 ggaaggaaca ttttgatgct cggcaaccgt caccatgcca ttaccgacag ccagcaataa
     4861 caggccaatc agcgcggcat tgagcagcgg acgtagcggg gggagcttgt gtccgcgcag
     4921 tagcaaaaat gccatcaata aaataccggc tgccaggaat cgaacgcctg ccatcattaa
     4981 cggaggccag ctttccacgc caatccgaat gacaaaatag gttgagcccc aaatgatata
     5041 caacgcaaac agcgcgccaa aaagcggtaa caactggcgg aaacgcataa tccctcacgg
     5101 tggaaataaa aaggtggttc atagtaaacg tgaaaatcat tctgctggcg agagatataa
     5161 ttgcacttaa ttgttaaaaa aatgttgacc tgtgaagcaa gtatcagagc tgc
//
LOCUS       DADMHC010000232         5189 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.235, whole genome shotgun sequence.
ACCESSION   DADMHC010000232 DADMHC010000000
VERSION     DADMHC010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5189)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5189)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5189
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.235"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..792)
                     /locus_tag="JNZ57_003670"
     CDS             complement(<1..792)
                     /locus_tag="JNZ57_003670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HAY8829727.1"
                     /translation="MKPAHNPSFFRSFCGLGCISRLSVEEQNITDYHRIWDNWAKEGA
                     ATEDRTQAVRLLKICLAFQEPALNLSLLRLRSLPYLPPHIQELNISSNELRSLPELPP
                     SLTVLKASDNRLSRLPALPPHLVALDVSLNRVLTCLPSLPSSLQSLSALLNSLETLPD
                     LPPALQKLSVGNNQLTALPELPCELQELSAFDNRLQELPPLPQNLRLLNVGENQLHRL
                     PELPQRLQSLYIPNNQLNTLPDSIMNLHIYADVNIYNNPLSTRTLQ"
     gene            884..970
                     /locus_tag="JNZ57_003671"
                     /pseudo
     CDS             884..970
                     /locus_tag="JNZ57_003671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015869530.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(980..1060)
                     /locus_tag="JNZ57_003672"
                     /pseudo
     CDS             complement(980..1060)
                     /locus_tag="JNZ57_003672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416850.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
     gene            1271..1360
                     /locus_tag="JNZ57_003673"
                     /pseudo
     CDS             1271..1360
                     /locus_tag="JNZ57_003673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311139.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1175 family protein"
     gene            1504..5189
                     /locus_tag="JNZ57_003674"
                     /pseudo
     CDS             1504..5189
                     /locus_tag="JNZ57_003674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311138.2"
                     /note="frameshifted; internal stop; incomplete; missing
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2-macroglobulin family protein"
BASE COUNT         1288 a         1212 c         1426 g         1263 t
ORIGIN      
        1 ttgcagagtg cgagtcgaca atggattgtt ataaatatta acatctgcat aaatgtgcag
       61 attcatgata ctgtctggca atgtgttcag ctgattgtta gggatatata gtgattgcag
      121 acgttgtgga agttcgggca gtctgtgtag ttggttttcc ccaacgttta aaagcctcag
      181 attttgagga aggggcggta gctcttgtaa tctgttatca aaagcactta gttcctgtag
      241 ttcacatggt aattctggta aggcagtaag ctggttgttg ccaacagaaa gtttttgtag
      301 agccggggga agatcaggta gcgtctccag gctattgaga agggctgaga gtgactgcaa
      361 ggaagatgga agagaaggta aacatgttaa aactctgtta agtgaaacat caagagcgac
      421 caggtgaggc ggaagagccg ggagcctgct cagtctgtta tcgctggctt taagtacagt
      481 taaggacgga gggagttctg gcagagagcg tagctcattg ctagagatgt taagttcttg
      541 tatgtgcggg ggcaggtatg ggagagagcg taatctgagt aaacttaaat tgagggctgg
      601 ctcttgaaaa gccagacata ttttcagtaa tcgaactgcc tgtgttcggt cttctgttgc
      661 agcaccttcc ttggcccagt tatcccagat gcggtgataa tccgtgatat tttgctcttc
      721 tacggataaa cgggatatac atcctaaacc acaaaaggag cggaaaaaag aaggattgtg
      781 ggcaggtttc atttattatt gatcctcatt gtttatatat taatatgttc gtgcaaatgg
      841 agtgaggatt ctttaaaaaa acgctcctgt aaatagttaa gaacaggaag aactgttggg
      901 gatgtggctg gccgaaaatg aaggggtgaa gttctggctc aatgtgctga ctgaactgaa
      961 aaaacgcggt tggtcgccct accttttcat caagccagta gtctgcccac cactgcatca
     1021 tttctctgcg cttatcgaga tactgagcat ggttgtaaat tcaactaacc cagtgcgttg
     1081 acaaaaaatt agcgcaagaa gacaaaaaat caccttgcgc taatgctctg tatcaggtca
     1141 ctaataccag ctaagtagtt gattcatagt gactgcatat gttgtgcttt gtcgcatttt
     1201 gtagtctatt atttaatctg taacaacgat aatacaatga attttaattg gtttttgtga
     1261 ttttgtcttt cttctgacat ggaaggacac ccgatggata cccaacgatt ccaatcccaa
     1321 tttcattggc atttatcgtt taaattttat ggcgcgatag cagcgtgctt gtctctgtct
     1381 cttgtgggaa cagggcttgc taatgctgat gattcgcttc cttccagtaa ctatgcgccg
     1441 cccgccgggg gaacattctt tttgcttgct gacagcagtt ttagcagcag tgaagaggcg
     1501 aaagtgcgac tggaagcgcc ggggcgtgat tatcggcgct atcagatgga agagtacggc
     1561 ggcgtggacg ttcgcctgta tcgtattcct gacccgatgg catttttgcg ccagcagaaa
     1621 aacctgcatc gcattgtggt gcaaccgcaa tatctgggcg acgggctgaa caatacgctg
     1681 acctggctgt gggataactg gtacggcaaa tctcgccgcg taatgcagcg tactttctct
     1741 tctcagtcac ggcagaatgt gactcaggca ttacccgaat tacatctcgg caatgccatt
     1801 attaaacctt cccgttatgt acagaacaac cagttttccc cgctgaaaaa atatcccttg
     1861 gtggaacagt tctgttatcc actatggcag gctaaaccgg tcgagccgca gcaaggggta
     1921 aaactggaag gcgcatccag caatttcatc tcgccgcagc cgggtaacat ttatattcct
     1981 ctcggccaac aagagccggg actgtacctc gtcgaggcga tggttggtgg gtatcgggcg
     2041 acgacggtgg tgtttgtttc cgataccgtg gctcttagca aagtgtcagg caacgagctt
     2101 ctggtgtgga ccgcgggtaa aaaacagggt gaagcgagcc cggctcagag atcttgtgga
     2161 ctgacggtct tggcgtgatg acccgcggtg tgaccgatga cagcggtacc ttgcagttac
     2221 aacatatatc gccagaacgt tcatacattc tgggtaagga tgctgaaggc ggcgtttttg
     2281 tctccgagaa cttcttctac gaaagcgaaa tctacaacac ccgcttgtat atttttaccg
     2341 atcgcccgct atatcgcgca ggcgatcgtg tcgatgttaa agtgatgggc cgcgagttcc
     2401 acgatccgtt gcattcatcc cccatcgtca gcgccccggc gaagctttcg gtgctggacg
     2461 ctaacggcag tctgttgcaa accgtcgatg tcacgctgga tgcgcgcaat ggcgggcagg
     2521 gaagtttccg cctgccagaa aatgccgttg ccggaggtta tgagttacgt cttgcttacc
     2581 gcaatcaggt ctatagcagc agttttcgcg tggcaaacta catcaagcca catttcgaga
     2641 ttggtttagc tctcgacaaa aaagagttca aaactggcga agcggtcagc ggcaaactgc
     2701 aactgctcta cccggatggc gagccggtaa aaaatgcccg cgtgcagtta agtttgcgcg
     2761 ctcagcaatt atcaatggtc ggtaacgatt tgcgttatgc cggacgtttc cccgtgtcgc
     2821 tggaaggcag cgaaacggtg tccgacgcca gcggtcatgt ggcgttaaat ctccccgccg
     2881 ccgataaacc gagccgttat ttgttaaccg tctccgccag tgacggcgcg gcgtatcgtg
     2941 tcaccaccac caaagagatc ctcattgaac gcggtctggc gcattactca ttaagtactg
     3001 ccgcacaata cagtaatagc ggcgagtcgg ttgtgttccg ttatgccgcg ctggaatctt
     3061 caaaacaggt tcctgttacg tatgaatggt tgcgtctcga agaccgcacg agccatagcg
     3121 gagagctacc gtcaggcggc aaatccttta ccgtcaattt cgctaaacct ggcaactaca
     3181 atctgacatt acgcgataaa gacggcttaa ttctcgctgg gttaagttat gccgtcagcg
     3241 gtaagggcag cacggcgcat acgggtacgg tagatatcgt ggcggataaa acgctgtacc
     3301 agccaggcga aaccgcgaag atgctgatta cctttccgga gccaattgat gaagcattat
     3361 tgacgctgga acgcgatcgc gtggaacagc agtcgctgct ttcgcatccg gcaaactggc
     3421 taacgctaca acgtttaaac gatacccagt atgaagcccg ggttccagtg agcaattcct
     3481 ttgcgcctaa catcactttt tcggtgctgt atacccgtaa tggtcagtac agttttcaga
     3541 acgccgggat caaagttgcc gttcctcagc ttgatatccg ggtgaaaacg gacaaaaccc
     3601 attaccagct tggtgaactg gtcaatgtcg aattaacctc gtcgctgaaa ggtaaacctg
     3661 tttctgcgca gctaacggta ggcgtggtcg atgaaatgat ctacgcgctg caaccagaaa
     3721 tcgcgccgaa tatcggcaaa tttttctatc cgctggggcg taacaatgtg cgtaccagct
     3781 ccagtctgtc gtttatcagc tacgaccagg cgctctccag cgagccggtt gcgcctggcg
     3841 caactaaccg cagcgagcgg cgagtaaaaa tgcttgaacg tccacggcgt gaagaggtgg
     3901 ataccgcggc atggatgccg tcactcacaa ccgataaaca aggcaaagcg tatttcacgt
     3961 tcctgatgcc tgattcgtta acccgctggc gtatcaccgc gcgtgggatg aacggcgacg
     4021 ggctggtcgg gcaggggcgt gcttatctgc gttcggaaaa aaatctctac atgaagtgga
     4081 gtatgccaac ggtgtatcgc gtgggcgaca aaccggcggc aggactgttt atcttcagtc
     4141 agcaggataa cgaaccggtg gcgctggtga ctaaatttgc aggcgctgag atgcgccaga
     4201 cgctgacgct gcacaaaggg gcgaattata tttcgctggc gcagaatatt cagcaatctg
     4261 gcttgttaag tgcagaactg caacaaaatg ggcaagtgca ggacagcatt agcacaaaac
     4321 tgtcttttgt ggacaacagc aggcccgttg aacagcagaa aaatgtcatg ctcggcggtg
     4381 gcgagaacgc gctgatgttg cccgctcagt ctcgcctggc gttcgcttgc cgatcatcaa
     4441 agtgccgccg ctaacgacat tcgtcagatg attcaggata accgtctgcg gctgatgcaa
     4501 ctggcggggc ccggagcgcg ctttacctgg tggggtgaag atggcaatgg tgacgccttc
     4561 cttacggcat ggtacgccga ctggcaggcc agctaggcgc tcggcgtaac gcaacaaccg
     4621 gaatactggc agcatatgct cgacagttat gccgagcagg cggataacat gccgttattg
     4681 catcgggcgc tggtgctggc gtgggcacag gagatgaatc tgccgtgcaa aacgttgttg
     4741 aaagggttgg atgaagctat cgcccggcgc ggaactaaag atgaagattt ctctgaggaa
     4801 gacatccgcg atatcaatga cagcctgatc ctcgatacac cggaatctcc actggcagat
     4861 gcggtggcaa acgtcttaac catgacgttg ctgaaaaaag cgcagttgaa gtccacggtg
     4921 atgccacagg ttcagcaata tgcgtgggat aaagcggcaa acagcaatca gccgctggcg
     4981 cacacggttg tgctgctcaa tagcggtggt gacgctaccc agacggccgc tattttaagt
     5041 ggtttgaccg ctgagcaatc cactattgag cgagcgctgg ccatgaactg gctggcgaaa
     5101 tatatggcga caatgcctcc agttgttttg cctgcgcctg cgggcgcatg ggctaaacat
     5161 aagttaactg gagggggcga atactggcg
//
LOCUS       DADMHC010000233         5149 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.236, whole genome shotgun sequence.
ACCESSION   DADMHC010000233 DADMHC010000000
VERSION     DADMHC010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5149)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5149)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5149
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.236"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..4047)
                     /locus_tag="JNZ57_003675"
     CDS             complement(<1..4047)
                     /locus_tag="JNZ57_003675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001033182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HAY8829728.1"
                     /translation="MNKIFKVLWNPATGNYTVTSETAKSRGKKSGRSKLLISALVAGG
                     MLSSFGALANAGNDNGQGVDYGSGSAGDGWVAIGKGAKANTFMNTSGSSTAVGYDAIA
                     EGQYSSAIGSKTHAIGGASMAFGVSAISEGDRSIALGASSYSLGQYSMALGRYSKALG
                     KLSIAMGDSSKAEGANAIALGNATKATEIMSIALGDTANASKAYSMALGASSVASEEN
                     AIALGRSSVASGTDSLTFGRQSLASAANAIAIGAETEAAENATAIGNNAKAKGTNSMA
                     MGFGSLADKVNTIALGNGSQALADNAIAIGQGNKADGVDAIALGNGSQSRGLNTIALG
                     TASNATGDKSLALGSNSSANGINSVALGADSIADLDNTVSVGNSSLKRKIVNVKNGAI
                     KSDSYDAINGSQLYAISDSVAKRLGGGAAVDVDDGTVTAPTYNLKNGSKNNVGAALAV
                     LDENTLQWDQTKGKYSAAHGTSSPTASVITDVADGTISASSKDAVNGSQLKATNDDVE
                     ANTANIATNTSNIATNTANIATNTTNITNLTDSVGDLQADALLWNETKKAFSAAHGQD
                     TTSKITNVKDADLTADSTDAVNGSQLKTTNDAVATNTTNIANNTSNIATNTTNISNLT
                     ETVTNLGEDALKWDKDNGVFTAAHGTETTSKITNVKDGDLTTGSTDAVNGSQLKTTND
                     AVATNTTNIATNTTNISNLTETVTNLGEDALKWDKDNGVFTAAHGNNTASKITNILDG
                     TVTATSSDAINGSQLYDLSSNIATYFGGNASVNTDGVFTGPTYKIGETNYYNVGDALA
                     AINSSFSTSLGDALLWDATAGKFSAKHGTNGDASVITDVADGEISDSSSDAVNGSQLH
                     GVSSYVVDALGGGAEVNADGTITAPTYTIANADYDNVGDALNAIDTTLDDALLWDADA
                     GENGAFSAAHGKDKTASVITNVANGAISAASSDAINGSQLYTTNKYIADALDGDAEVN
                     ADGTITAPTYTIANAEYNNVGDALDALDDNALLWDETANGGAGAYNASHDGKASIITN
                     VANGSISEDSTDAVNGSQLNATNMMIEQNTQIINQLAGNTDATYIQENGAGINYVRTN
                     DDGLAFNDASAQGVGATAIGYNSVAKGDSSVAIGQGSYSDVDTGIALGSSSVSSRVIA
                     KGSRDTSITENGVVIGYDTTDGELLGALSIGDDGKYRQIINVADGSEAHDAVTVRQLQ
                     NAIGAVATTPTKYFHANSTEEDSLAVGTDSLAMGAKTIVNGDKGIGIGYGAYVDANAL
                     NGIAIGSNAQVIHVNSIAIGNGSTTTRGAQTNYTAYNMDAPQNSVGEFSVGSADGQRQ
                     ITNVAAGSADTDAVNVGQLKVTDERVAQN"
     gene            complement(4091..4447)
                     /locus_tag="JNZ57_003676"
     CDS             complement(4091..4447)
                     /locus_tag="JNZ57_003676"
                     /inference="COORDINATES: protein motif:HMM:NF023053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3251 domain-containing protein"
                     /protein_id="HAY8829729.1"
                     /translation="MALAGRVLSIDATENGSVIHISLVNLLSTPISNIGFNATWGGEK
                     PVDAKEFARWQQLLFNTSMKSTLKLLPGQWQDINLTLKGVSPNNLGYLKLAINMENIQ
                     FDNLPSAENRQKRSKK"
BASE COUNT         1216 a         1224 c         1185 g         1524 t
ORIGIN      
        1 attttgcgct acgcgctcat cagtgacttt caactgaccc acgttaaccg catcggtatc
       61 cgctgaacca gctgcgacgt ttgtgatctg acgttgacca tccgcactac cgactgagaa
      121 ttcaccgaca gagttctgcg gtgcgtccat gttgtaggcg gtataattgg tttgagcgcc
      181 acgagtggtc gtagaaccat tacctatcgc aatactgttg acatgaatga cttgcgcatt
      241 gctaccaatg gcaatgccgt taagtgcatt cgcgtccacg taggcaccat aaccgatacc
      301 aataccttta tcgccattca cgatggtttt cgcacccatt gccagcgagt cagttcccac
      361 tgccagtgaa tcttcttccg ttgaattagc gtggaagtat ttagtcggcg tggttgcgac
      421 cgcaccaatc gcattctgca attgacgaac cgtaacggcg tcatgggctt cggaaccatc
      481 ggctacgttg atgatttgac gatatttacc gtcatcaccg atagacaatg caccgagcag
      541 ttcgccatcc gtggtgtcgt aaccaataac aacgccattt tccgttatgc tggtgtcacg
      601 ggagcctttg gcaatcactc ggctggaaac agagctgcta cctagggcga tacccgtatc
      661 aacgtcgctg tagctgccct gaccaatagc tacgctgcta tcgcctttgg cgacagagtt
      721 ataacctata gctgtagcgc caacaccctg tgcgctggcg tcgttgaacg ctaagccgtc
      781 gtcgttagta cgcacatagt taatacccgc accgttttct tggatatagg ttgcgtcggt
      841 gttaccagcg agctgattga taatttgggt gttctgctca atcatcatat tcgtcgcatt
      901 caactgagaa ccgttcactg catcggtact gtcctcacta atactgccat tagcgacatt
      961 agtgatgatg ctggctttac cgtcatggct ggcattgtag gctccagcac cgccattggc
     1021 agtctcatcc cacagcaggg cgttatcatc aagcgcatcc agggcgtcac cgacgttgtt
     1081 gtactcggcg ttcgcaatgg tgtaagtcgg tgcggtgatg gtgccgtcag cgttgacttc
     1141 tgcgtcacca tccagcgcat cagcgatgta cttattggtg gtatagagtt gtgagccgtt
     1201 aatcgcgtcg ctgctggcag cagagattgc accgttagcg acgttagtga ttacactggc
     1261 agttttatct tttccatgag cggcgctaaa tgcaccattt tcaccggcgt ccgcatccca
     1321 gagcagagcg tcgtcaagag tggtatcgat agcattcagg gcatcaccga cattatcgta
     1381 atcagcatta gcaatggtgt acgtcggcgc agtgatggtg ccgtctgcat tgacttcggc
     1441 accacccccc agcgcatcaa caacataact gctcacgccg tggagttgtg agccgtttac
     1501 tgcgtcagaa ctggagtctg aaatttcacc atctgcgaca tcagtgatca cgcttgcgtc
     1561 accattagta ccgtgtttgg cactgaattt acctgcggtg gcatcccaaa gcagagcatc
     1621 gccgagagac gtgctaaatg aggagttaat cgcagccagt gcatcgccga cgttataata
     1681 atttgtttca ccgattttgt aggttggacc ggtaaacaca ccgtcagtat tcacagaagc
     1741 attgccgccg aagtaggtgg cgatattgct gcttaagtca taaagctggc taccgttaat
     1801 ggcatcggaa ctggttgcag tgactgtgcc gtccaggata ttggtgattt tgctggcggt
     1861 attgttgcca tgagctgcag tgaagacacc attgtcctta tcccatttca gcgcatcctc
     1921 accaagatta gtcaccgtct cagtcagatt agagatgttg gtggtgttag tggcgatatt
     1981 ggtggtattc gtcgccacgg catcgttggt ggttttcagc tgagagccgt taacggcatc
     2041 ggtgctgcca gtcgtcaggt cgccatcttt aacgttggtg attttgctgg tggtctcggt
     2101 gccatgagct gccgtgaata caccattgtc cttatcccat ttcagcgcat cctcaccaag
     2161 attagtcacc gtctcagtca gattagagat gttggtggtg ttagtggcaa tattggaagt
     2221 gttattggcg atattggtgg tattcgtcgc cacagcatcg ttggtggttt tcagctgaga
     2281 gccgttaaca gcatcagtgc tgtcagccgt caggtcggca tctttaacgt tggtgatttt
     2341 gctggtggta tcctggccgt gagctgcact gaatgccttt ttagtttcgt tccagagcag
     2401 ggcatcagcc tgaaggtcac caacggaatc cgtcaggttg gtgatattgg tggtattggt
     2461 ggcaatattt gccgtattcg tggcaatgtt gctggtatta gtagcgatat tggcggtgtt
     2521 ggcttcgaca tcgtcattgg tagctttcag ttgggaaccg ttaaccgcat ccttactgga
     2581 ggctgaaatc gtgccatccg caacatcggt gattacgctg gcagttgggc tactagtacc
     2641 atgagcagcg ctgtatttgc ctttggtttg gtcccattgc agggtgtttt catcaagtac
     2701 agcgagcgca gcccctacgt tatttttgct accatttttt aaattgtagg ttggtgctgt
     2761 aacagtaccg tcatcaacat ctactgcagc ccctcctcca agcctttttg ctaccgagtc
     2821 gctaatggca taaagctgtg aaccattaat ggcatcgtaa ctgtcagact tgatcgcgcc
     2881 atttttcaca ttaacgatct tgcgttttaa tgaactattg ccgacagaga cggtattgtc
     2941 taaatccgca atggaatctg cgcccagcgc gacagagtta ataccgttgg cactgctatt
     3001 actaccaagc gcaagactct tatcaccagt tgcattactg gctgtgccta aggcaatggt
     3061 gtttaagcct ctcgactggc taccattacc cagagcgatg gcatccacgc catcagcttt
     3121 gttgccctgg cctatggcga ttgcattatc tgccagagcc tggctgccat ttcctaatgc
     3181 gatagtattg actttatcgg caaggcttcc gaaccccatt gccatgctat tagtcccttt
     3241 tgccttcgca ttattgccaa tagcagttgc attttcagcg gcttcggtct cagcacctat
     3301 cgcaatagcg ttcgctgcgc tggcaagtga ttgtctgcca aatgtgaggc tgtcagtacc
     3361 gctagctaca ctgctacgcc ccagggcaat tgcgttttct tcagatgcga cgctacttgc
     3421 tcccagcgcc attgaatacg cttttgacgc attggcggtg tcgccaagag caatactcat
     3481 aatctcagta gctttagtgg catttcccag ggcaatggcg tttgctcctt ccgctttgga
     3541 agagtccccc atagcaatag acaatttacc caatgctttt gaataacggc cgagggccat
     3601 tgagtattgg cccaatgaat acgaagaggc acccagtgct atacttctat cgccttctga
     3661 tattgcacta accccaaagg ccattgatgc accaccaatc gcatgggttt ttgacccgat
     3721 ggcagagcta tattggcctt cagctatagc gtcataaccc acagcagtac tggaaccact
     3781 ggtgttcata aaagtatttg ctttcgcccc tttgcctata gcaacccagc cgtcgccagc
     3841 tgatccacta ccgtaatcaa caccctgacc gttgtcattc ccggcattcg ccaatgcccc
     3901 aaacgacgac aacattccac ccgcaaccag cgcagaaatt aacagcttac tgcgcccaga
     3961 tttcttgcca cggctttttg ccgtttcgct ggtaacagta taattccctg tcgcagggtt
     4021 ccagagaact ttaaatattt tgttcattaa tgatgctcgc tattccttgt tataagcgta
     4081 ctaactgcat ttattttttg cttcttttct gccgattttc agcagaggga agattgtcga
     4141 actgaatatt ttccatgttg atggctaact tcagatatcc caggttattg ggcgatacac
     4201 ccttcagggt caaattaatg tcttgccatt gacctggtaa taatttcaat gtggatttca
     4261 ttgatgtgtt gaaaagtaat tgttgccacc gggcaaactc tttggcatcg acaggttttt
     4321 caccacccca tgtcgcatta aaaccaatat ttgagatagg tgtacttaat aagttgacca
     4381 gtgaaatatg aataacactg ccattctctg tggcgtcaat ggataacact cgacccgcta
     4441 aagccaccga accattgttc aggatgaaat acttcgtttt tgctgggtta aactcggtaa
     4501 aaataaaagt gttttgttga tctttaacgg atttaattac gtgagttaaa gtctttgtac
     4561 tgcttattat gccagtttgt tgtttttgaa tagtttccag ttgactcttt agctatgctt
     4621 gttgtttttc aagtagatca attttattgt tatgttcttc ttgttgtttc aataaactac
     4681 tttctggctt gccttcttca atgtagtcac atcccgttaa tgcgcagaga actgaaacag
     4741 tgacagcact gaaaaaaatc ttcttcaagt tcatgtaaaa atccttattt cctccgacca
     4801 gcgatcaatg ccggtagagt tgtccattgt attattggtg atttatgttg ctttacatta
     4861 atgacagtga tgtgtgtcga ttaaatattg ttttaagcat tcatcataaa aatgtatcat
     4921 tcgtttcaaa agatgtctgt gtttgtatga atatattatt tttgtggatt ctaatgatga
     4981 ttattaataa atgtcaaata tgaaagaaac catgtctggg aaaaaattta cagataattt
     5041 attgtatgaa tatgatgatt aaaatatcac aattaaatcc gaaaaaaaga gacgtaactg
     5101 cttgttaatt aataaatgat atcttcggta atgactccaa cttactgat
//
LOCUS       DADMHC010000234         5046 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.237, whole genome shotgun sequence.
ACCESSION   DADMHC010000234 DADMHC010000000
VERSION     DADMHC010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5046)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5046)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5046
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.237"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            148..264
                     /locus_tag="JNZ57_003677"
     CDS             148..264
                     /locus_tag="JNZ57_003677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004996477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HAY8829730.1"
                     /translation="MPGIPPEIRWNNQKNALQLWNKEGGVVRREGDPLEMAQ"
     gene            628..1470
                     /locus_tag="JNZ57_003678"
     CDS             628..1470
                     /locus_tag="JNZ57_003678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HAY8829731.1"
                     /translation="MLNEGGILFKANHVPVLMYHHVSHCPGLVTLSPVTFRKQMKWLA
                     ENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDGYLDNWFQVYPLLKEFNLKAHIFLIT
                     GFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVMLRWSEVNEMLQSGLVEFHVHTHTH
                     TRWDKKFSSREEQCKHLRQDLLSGREYLKEMTGKCSKHLCWPEGYYNKDYIQVAEELG
                     FYYLYTTERRMNAPAKGTTRIGRISTKERESCAWLKRRLFYYTTPFFSSLLAFHKGPR
                     LPDD"
     gene            1473..2561
                     /gene="capU"
                     /locus_tag="JNZ57_003679"
     CDS             1473..2561
                     /gene="capU"
                     /locus_tag="JNZ57_003679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hexosyltransferase CapU"
                     /protein_id="HAY8829732.1"
                     /translation="MNILFTESSPNIGGQELQAVAQMKALKKMGHSVLLVCRENSKIA
                     FEASKLGIDITFALFRNSLHIPTAWRLLGIVHGFQPNAIVCHSGHDSNIVGLVRLFTW
                     KHPFRIIRQKTYLTRKTKVFSINHFCDEVIVPGTSMKTHLEQEGCRTRVTVVPPGFDF
                     QKLYVDSRNSLPPNVLSWLASRRGCPVIAQVGMLRPEKGHEFMLNLLFHLKMNGRQFC
                     WLIVGSGSPELREHLQYQIDSMGMHDDVFIADNVFPAAPVYRVASLVVLPSENESFGM
                     VLAEASAFSVPVLASQIGGIPDVIQNNQTGTLLPAGNKHAWMCALNDFFNDPGRFYQM
                     ARQAKQDIEERFDINKTALKILTLAKHK"
     gene            2566..3516
                     /gene="virK"
                     /locus_tag="JNZ57_003680"
     CDS             2566..3516
                     /gene="virK"
                     /locus_tag="JNZ57_003680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor VirK"
                     /protein_id="HAY8829733.1"
                     /translation="MFSVSNLSFIGFLKRIVFSSDSLPGKWEHRKFRFMYILRCAINP
                     VVSIRYYYELRSLPCIEDILAIHPTLPARIHRPYLHKGGRAWTRGQYILEHYRFVQNL
                     PEKYSKFLFPQKSVSLVQFIGKDGENFDIQCSPSGFDREGELMLSLFYNKTVITRLTF
                     SVILTQNGHIAFIGGLQGAPKNTGPDVIRCATRACYGIFPKRIIFEAFCALMKACNIS
                     ECLAVSEHSHVFRQLRYWYQKRKTFVAVYSDFWESVAGKTCGDWYRLPTQVIRKPLSD
                     IASKKRSEYRKRYALLDYIHETTIRSLDAYPVHSEHQDLN"
     gene            3581..4525
                     /gene="lpxM"
                     /locus_tag="JNZ57_003681"
                     /gene_synonym="msbB"
     CDS             3581..4525
                     /gene="lpxM"
                     /locus_tag="JNZ57_003681"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858371.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HAY8829734.1"
                     /translation="MKKYKSEFIPEFKKNYLSPVYWSTWFLLGMIAGISMFPPSFRDP
                     VLAKIGRWAGRLSKKARRRATINLSLCFPEKSDTEREIIVDKMFATALQSIVMMAELA
                     IRGPEKFQKRVFWKGLEILEEIRYNNKNVIFLVPHGWSVDIPAMLLAAQGEKMAAMFH
                     QQRNPVIDYVWNSVRRKFGGRLHSREDGIKPFIQSVRQGYWGYYLPDQDHGPEYSEFA
                     DFFATYKATLPIIGRLMNISQAMIIPLFPVYDEKKHFLTIEVRPPMDACIASADNKMI
                     ARQMNKTVEILVGSHPEQYIWVLKLLKTRKSNEADPYP"
     gene            complement(4680..>5046)
                     /locus_tag="JNZ57_003682"
     CDS             complement(4680..>5046)
                     /locus_tag="JNZ57_003682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001395480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HAY8829735.1"
                     /translation="TGKVSYVGGNSKSSALFISLLKRLKATYRRAKTITLIVDNYIIH
                     KSRETQSWLKENPKFRVIYQPVYSPWVNHAERLWQALHDTITRNHQCRSMWQLLKKVR
                     HFMETVSPFPGGKHGLAKV"
BASE COUNT         1416 a          978 c         1161 g         1491 t
ORIGIN      
        1 tatcggtggc aatagcctgt gcaaattttt tataacccgg gatcgtgtca ggattcagag
       61 tatgataaag acagattttc atggctgccg gtttccgtcg tgcaaaaaac atgctgattt
      121 tacgaaggaa tgccttactg aacaaccttg cccggaatcc cccccgaaat cagatggaac
      181 aatcagaaaa atgctctgca gttatggaat aaagaaggtg gggtggtacg ccgggagggc
      241 gatccgctgg aaatggcgca gtagctgcag gcctgtcatg atgccggaat agaagttcgt
      301 gtacaggtta atgaaagcgt caccccgtaa ataaactctg cgctgaaatt cctttttttc
      361 attggagcac ctgtgttgtt ctgaggtgaa catatcacct ctgttcaggt agccaaattc
      421 agtgtgccac ctcaaggttc ttagtgagtc gtttttaaaa gatatgataa tatatcattg
      481 tttatgaatt gttgatgttt aatttagtaa aatatatcaa gtatgccatg ggtttgctat
      541 gttattcatc cagtatctgg aaataaaatg caccagcttt attgggtttt ccttttgtct
      601 ctgcttacta ggtgccagaa actttaaatg ttaaacgaag ggggcatttt gttcaaagcc
      661 aatcatgttc cggtattaat gtatcatcat gtcagtcatt gccccggact ggttacactt
      721 tctcccgtga cattccggaa gcaaatgaaa tggttggctg aaaacaactg gaaaacactg
      781 tcatcagatg aactggagtt tttttatcgg ggcggaaaac tcccccggaa aagcgttatg
      841 ttgacatttg atgatggata ccttgacaac tggtttcagg tatatccttt attaaaagag
      901 tttaatctca aagcacatat ttttttaatt accggtttta ttgggaatgg tccggttcgt
      961 cactctcctg gaaaggaata ttctcatcgc gattgcgaac atcaaatagc gacagggaat
     1021 gctgataatg ttatgcttcg ctggtctgaa gtaaacgaaa tgttgcaatc tggtctggtc
     1081 gaatttcatg ttcatacgca tactcataca cgctgggata aaaagttcag ttcacgagaa
     1141 gaacagtgta aacatcttcg gcaggacttg ttgagcggga gagaatattt gaaagaaatg
     1201 acaggaaaat gcagtaaaca tttgtgttgg ccggaaggtt attataacaa ggattatatt
     1261 caggtcgctg aagaacttgg attctattat ttatatacaa cagaaagaag aatgaatgct
     1321 cctgctaaag gaactacacg gataggaaga ataagcacca aagaacggga aagttgcgca
     1381 tggctgaaaa gacgactttt ttattataca acaccgtttt tttcatcgtt gctggccttt
     1441 cataaggggc caagattacc ggatgattaa taatgaatat actatttacg gaatcatcac
     1501 cgaatatagg tggtcaggaa ttacaggctg ttgctcaaat gaaggccctg aagaaaatgg
     1561 ggcattcagt tctgcttgtc tgcagggaaa acagcaaaat tgcttttgaa gccagtaaat
     1621 tgggaattga tatcacattc gcgttatttc gaaacagtct tcacatccct actgcatgga
     1681 gattactcgg aatagttcat ggttttcagc ccaatgcaat cgtttgtcac agtgggcatg
     1741 atagcaatat tgttggttta gtacggttat tcacttggaa acatccattc agaattatca
     1801 ggcaaaagac atatttgaca cgaaaaacaa aagttttttc aataaatcat ttttgcgatg
     1861 aggtgattgt tcccggaaca agtatgaaga cacatctgga gcaggaagga tgtcgaaccc
     1921 gggttactgt tgtgcctcca ggctttgatt tccagaaatt atacgttgat tcccgaaaca
     1981 gtttgcctcc aaatgttctt tcttggctgg cgtcccgaag gggatgcccc gttattgctc
     2041 aggtaggaat gttgcgcccg gaaaaagggc acgaatttat gttgaattta ctgttccatt
     2101 taaaaatgaa tggacgacag ttctgttggt tgattgtggg gtctggttcg cctgaactgc
     2161 gggagcattt acagtatcag attgacagta tgggcatgca tgatgatgtt tttattgctg
     2221 acaatgtttt tcctgccgcc cccgtatatc gggttgccag tctggtggtt ctgccttcag
     2281 aaaacgaatc gtttggtatg gtactggcag aagcatcggc attttctgtg cctgtactgg
     2341 ccagtcagat tggtggaatc cctgatgtta ttcagaacaa ccagaccggg acattgttac
     2401 cagcaggtaa taagcacgca tggatgtgcg ccctgaatga tttttttaat gaccctgggc
     2461 gtttttatca gatggctcgc caggcaaaac aggatataga agagcggttt gatattaata
     2521 aaactgcgtt aaaaatactc acattagcga agcacaagta acaatatgtt ttctgtaagt
     2581 aacttatcat ttatcggttt ccttaaaagg attgtttttt cctcagattc actcccgggg
     2641 aagtgggaac acagaaaatt ccggttcatg tacattttgc gatgtgctat aaatccggtt
     2701 gtcagtattc gatattatta cgaactgcgt tccttgccgt gcattgagga tattctggca
     2761 atacacccca cgttgccagc aagaattcat cgcccttatt tgcataaagg ggggcgcgcc
     2821 tggacccgtg gacaatatat tcttgagcat tatcgctttg tgcaaaattt gccagaaaaa
     2881 tattctaaat ttttgtttcc acaaaaatcg gtatcattag tccaattcat cgggaaagat
     2941 ggagagaatt ttgatatcca gtgttctccc agtggttttg accgggaagg agagttgatg
     3001 ttgtcattgt tttacaataa aacagttatt acccggttaa cattttcagt cattctgact
     3061 caaaatggac acattgcttt tattggcgga ttacagggag cccctaaaaa taccggacct
     3121 gatgttattc ggtgcgcaac ccgggcctgt tatgggattt tcccaaaacg gattattttt
     3181 gaagcatttt gtgcgttgat gaaagcttgc aatatctctg agtgtctggc agtcagtgag
     3241 cacagtcatg ttttccggca attgagatac tggtatcaga aacgcaaaac ctttgttgcg
     3301 gtctatagtg atttctggga gtctgtagca ggaaaaacct gtggtgactg gtacagatta
     3361 ccaacccagg tgattcgaaa gccgctaagc gatatagcca gtaaaaaacg ctctgagtac
     3421 cgaaaacgat acgctttgct ggattatatc catgaaacta ctatccgctc tttggatgca
     3481 tatcctgtac actcagaaca tcaggattta aattaaggtt tgatgtattc tctgaataaa
     3541 acagtaatga taattttggt agaggcattc gcactaaata atgaaaaaat ataaatctga
     3601 gtttattcct gaatttaaga aaaattatct ttcccctgtt tactggtcta catggttcct
     3661 tttgggaatg attgcaggta tttcaatgtt tcccccttca ttcagagatc ctgtcttggc
     3721 aaaaataggg cgttgggcgg gcagattgag caaaaaagct cgtcgcaggg cgacgattaa
     3781 tttatcgctt tgtttcccag aaaagagtga tacagaacgg gaaataattg tcgacaaaat
     3841 gtttgccaca gcattgcaat ccatagtgat gatggcagaa ctggcaattc gtggtccgga
     3901 aaagttccag aaacgagtgt tctggaaagg cctcgaaatt cttgaggaaa ttcgatacaa
     3961 taacaaaaat gtgatttttc tggttcccca tggctggagc gtggatattc ctgcaatgtt
     4021 gctggcagct cagggggaaa aaatggccgc catgtttcat cagcaacgaa atccagtgat
     4081 tgattatgtc tggaattctg tacggcgtaa attcgggggg cgcttacatt cccgggagga
     4141 tgggataaaa ccatttattc agtcagtacg ccagggatac tgggggtatt accttccaga
     4201 tcaggatcat ggtcctgaat acagtgaatt tgctgatttt tttgcgacct ataaagcgac
     4261 attaccaatt attggacgtc tgatgaacat cagtcaggct atgattatac cgcttttccc
     4321 ggtttatgat gaaaaaaaac atttcctgac tattgaagtt cggccaccaa tggatgcatg
     4381 cattgccagc gcggacaata aaatgattgc ccgacaaatg aacaaaacag tggaaatttt
     4441 ggtggggtca catccggaac agtatatctg ggttttaaaa ttgttaaaaa cgcgcaaatc
     4501 aaacgaagcg gacccgtacc cttgaaatta taaagtacag gtatttccac tagttgtttc
     4561 ttacaggtta ccaatcgaaa cacaatcccc cttccgtgtg ttgcccgttt ggcacggagg
     4621 actgtgtaga tgcagttcgt taaatttaat ttatgcctaa atagctgcgc ttaataccgc
     4681 tacacttttg ccagtccatg tttgcctccg gggaatgggc tgacggtttc cataaaatgg
     4741 cgaacttttt tcaacagttg ccacattgag cggcactgat gattacgcgt tattgtgtcg
     4801 tgaagtgcct gccatagccg ttcagcatga ttcacccatg gcgagtaaac cggctgataa
     4861 atgaccctga acttcgggtt ctccttcagc cagctctgtg tttcccggct tttgtggata
     4921 atgtagttgt ccacgatcag cgtgatggtt ttcgcccgac ggtatgtcgc tttaagccgc
     4981 ttcagcaggc tgatgaacag cgccgaactt ttgctgttgc cgcccacata gctgacttta
     5041 cctgtc
//
LOCUS       DADMHC010000235         5019 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.238, whole genome shotgun sequence.
ACCESSION   DADMHC010000235 DADMHC010000000
VERSION     DADMHC010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5019)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5019)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5019
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.238"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..1755
                     /locus_tag="JNZ57_003683"
     CDS             <1..1755
                     /locus_tag="JNZ57_003683"
                     /EC_number="1.2.7.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016246021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase"
                     /protein_id="HAY8829736.1"
                     /translation="AKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCV
                     AAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKR
                     LNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPP
                     GNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGN
                     TCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYS
                     KGVFKRVLPAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWN
                     LGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPL
                     KLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTV
                     SPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRN
                     EHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGSPTRETLQR
                     LGLEDIAADLAAHNLLPV"
     gene            1768..2406
                     /locus_tag="JNZ57_003684"
     CDS             1768..2406
                     /locus_tag="JNZ57_003684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707570.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdhW family putative oxidoreductase system
                     protein"
                     /protein_id="HAY8829737.1"
                     /translation="MNHRDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAE
                     FIRQHSAAGQLVARAVFLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYS
                     TQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEA
                     AIAAMDVAPEYADIRQVESSTAELYLFSERFMTYGKAYGLCEWFEVEQFQNP"
     gene            2470..3138
                     /locus_tag="JNZ57_003685"
     CDS             2470..3138
                     /locus_tag="JNZ57_003685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416186.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HAY8829738.1"
                     /translation="MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDES
                     RCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCID
                     VCPTGASWRDEQGLVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLA
                     KGFPPICVSACPEHALIFGREDSPEIQAWLQDNKYYQYQLPGAGKPHLYRRFGQHLIK
                     KENV"
     gene            3135..3920
                     /locus_tag="JNZ57_003686"
     CDS             3135..3920
                     /locus_tag="JNZ57_003686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate reductase cytochrome B subunit"
                     /protein_id="HAY8829739.1"
                     /translation="MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVL
                     GLHALLRARGVKKSATDHGEKVYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGAT
                     AVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGI
                     MQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYW
                     LLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH"
     gene            3924..4736
                     /locus_tag="JNZ57_003687"
     CDS             3924..4736
                     /locus_tag="JNZ57_003687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829740.1"
                     /translation="MIITRADLREWRIGAVMYRWFLRHFRRGGSYADIHHALIEEGYT
                     DWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGEIPFCSQFARSDDHARIGCCED
                     NARIAIAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRI
                     ANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTG
                     VVDSIILGPGGSAALAYHDGERVRFAVAIEGENNIRTGVRYRLNEQHQFVEC"
     gene            complement(4748..>5019)
                     /locus_tag="JNZ57_003688"
     CDS             complement(4748..>5019)
                     /locus_tag="JNZ57_003688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-NAD(P)-binding protein"
                     /protein_id="HAY8829741.1"
                     /translation="RPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVA
                     FGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD"
BASE COUNT         1232 a         1144 c         1388 g         1255 t
ORIGIN      
        1 gcgaaatcac cggtatggct gaagattaaa gatgacaaag ttagcctgga aaaagccgat
       61 ttcttatggg gaaaagggac gcgcgcaacg acggaagaaa tttgtcgatt gaccagtccg
      121 gaaacctgtg tggcggctat tggtcaggct ggggaaaacc ttgttcctct ctctggcatg
      181 ttgaatagcc gtaaccacag cggcggtgcg ggaactggcg caattatggg ttcgaaaaac
      241 ctgaaagcga ttgcggttga agggacgaaa ggggtcaaca ttgccgatcg tcaggagatg
      301 aagcgtctca acgattacat gatgactgaa cttattggtg cgaataacaa ccatgtcgtg
      361 ccaagtacgc cgcaatcgtg ggcagagtat tcagatccca agtcacgttg gacagcacgt
      421 aaagggctgt tttggggcgc ggctgaaggt ggtccgattg aaacggggga aattccgcca
      481 ggcaatcaga acacggtcgg ctttcgtacc tataaatccg tttttgactt aggtccggcg
      541 gcagagaaat acacagtaaa aatgagtggc tgccactctt gcccgatccg ttgtatgacc
      601 caaatgaata ttcctcgggt gaaagagttt ggcgtgccca gcacaggtgg taacacttgt
      661 gtagccaact ttgtccatac caccatcttt ccgaacggtc cgaaagattt tgaagataaa
      721 gacgatggcc gtgtgattgg taacttggtt ggtctgaatt tgttcgatga ctacggccta
      781 tggtgtaact acgggcagtt gcatcgcgac tttacttatt gttacagcaa aggggtgttc
      841 aagcgtgttc tgcctgctga agagtatgcg gaaattcact gggatcaact ggaagcgggt
      901 gacgttaatt tcattaaaga tttttactac cgtctggcgc atcgtgtggg tgagctgagt
      961 cacctggctg atggttcata tgccatcgca gaacgctgga atttgggtga agagtactgg
     1021 ggctacgcga aaaataaact ctggtcgccg tttggctatc cggttcacca tgccaatgaa
     1081 gcgtcagcgc aggtcggttc cattgttaac tgtatgttca accgtgactg catgacacat
     1141 acccatatca actttattgg ttccggcttg ccattgaaac tgcaacgtga agtggcgaaa
     1201 gagctttttg gttctgaaga tgcctacgat gaaaccaaaa actacacgcc aatcaatgac
     1261 gcaaaaatta aatatgctaa gtggtcgctg ttgcgggtct gtttgcataa cgccgtcacc
     1321 ctgtgtaact gggtctggcc aatgaccgtt tcgccgctga aaagccgtaa ttaccggggc
     1381 gatctggcgc ttgaagccaa attcttcaaa gcgatcaccg gcgaagagat gactcaggaa
     1441 aaattagatt tagctgcaga gcgtatcttt acgttgcatc gtgcctacac ggtaaaactt
     1501 atgcaaacca aagatatgcg taatgaacac gatcttatct gttcctgggt attcgacaag
     1561 gatccgcaga tcccggtctt tactgaaggt actgacaaaa tggatcgtga cgatatgcat
     1621 gcttcgctca cgatgttcta caaagaaatg ggctgggacc cacagcttgg tagtcccacc
     1681 cgcgaaacat tgcagcgtct ggggctggaa gatattgccg ccgatctggc agcacacaat
     1741 ctactgcctg tgtaaggaat gggtgagatg aaccatcggg atgaattgcc gttagcgaaa
     1801 gtcagcgaag ttgacgaggc gaagcggcaa tggttacagg ggatgcgtca ccccgttgat
     1861 acggtaaccg aaccagaacc ggctgaaatc ctggcagagt tcattcgcca gcattctgcg
     1921 gctgggcagc tggtggcgcg cgccgtgttt ctctcgccac cctattcggt tgcagaagag
     1981 gagctgtcag ttttgctgga aagcattaag cagaacggag actacgctga tatcgcttgt
     2041 atgacgggaa gccaggatga ttactattac tcaacgcagg ccatgagtga aaactacgcg
     2101 gcgatgtctt tgcaagttgt ggagcaggac atttgtcgcg ccattgcaca cgccgttcgt
     2161 tttgagtgcc agacatatcc tcgtccttac aaagtcgcca tgctgatgca agcgccatat
     2221 tacttccagg aagcgcagat tgaagccgcg atcgccgcga tggatgttgc acctgaatat
     2281 gccgatatac ggcaggtgga gtcatcgacg gcggagttgt acttgtttag tgagcgattt
     2341 atgacctatg gcaaggctta tggcttatgc gaatggttcg aggtagagca gtttcagaac
     2401 ccctgaaatt tcagggagat gtcatggata gggtggacag ttgcagccac tgcattaggg
     2461 gataatcaga tgtccttcac tcgacgcaaa tttgttctgg ggatgggaac agtaatcttt
     2521 tttactggtt ctgcgtcttc tctgttagcg aacacgaggc aagaaaagga agttcggtat
     2581 gccatgattc atgacgagtc acggtgcaat ggctgtaata tttgcgcccg cgcatgccgt
     2641 aaaactaacc acgtccccgc tcagggaagc cgtttatcga tagcacacat tccagtcacc
     2701 gataacgaca acgaaacgca gtatcacttt tttcgccagt catgtcagca ctgcgaagat
     2761 gctccgtgca tcgacgtttg cccgacgggg gcatcgtggc gtgatgagca ggggctcgtg
     2821 cgggtagaaa aatcgcagtg catcggctgc agttattgca ttggcgcttg tccgtaccag
     2881 gttcgctacc ttaaccctgt cactaaagtg gcagataaat gtgatttctg cgctgagtcc
     2941 cgactggcaa aaggctttcc gcccatttgc gtcagcgcct gtccggaaca cgcattgatc
     3001 tttggtcgcg aagatagccc agaaattcag gcgtggttgc aggataataa atactatcaa
     3061 tatcagctac ctggtgccgg gaaaccgcat ctgtatcgcc ggttcggtca acatttgatt
     3121 aaaaaggaaa atgtatgaac ccgtcgcaac atgctgaaca gtttcagagc cagttagcga
     3181 actatgtgcc acagttcact cccgaatttt ggccggtgtg gttgatcatt gccggagtat
     3241 tgctggttgg gatgtggttg gtgctggggc tgcacgcctt gcttcgtgct cgtggcgtga
     3301 agaaatcagc caccgatcat ggtgagaagg tttatcttta cagcaaagcg gtcagattat
     3361 ggcactggtc gaatgcgtta ctctttgtat tgttgctggc aagtgggctg ataaatcact
     3421 ttgcgatggt gggcgcaact gcggttaaaa gtctggttgc ggtgcatgaa gtttgcggat
     3481 ttttgttact ggcatgctgg ctcggctttg tgctgatcaa tgccgttggg gataatggtc
     3541 accactatcg cattcgtcgt caggggtggc tggaacgagc ggcaaaacaa acgcgatttt
     3601 atttgtttgg cattatgcag ggggaagaac atcctttccc ggcaacaaca cagtctaaat
     3661 ttaatccctt acagcaggtc gcctatgttg gtgtcatgta tggattgctg ccgttgttac
     3721 tattgacggg gctgttgtgt ctctatccgc aagccgtggg agatgtgttt cctggcgtaa
     3781 gatactggtt attgcaggcg cattttgctc tggcatttat aagcctcttt tttatcttcg
     3841 gacatcttta tctttgcacc acggggcgta cgccacacga aacctttaaa agcatggtcg
     3901 atggctatca ccggcactaa cgaatgatca ttacacgagc agacctgcga gaatggcgta
     3961 tcggagcggt gatgtatcgc tggttcctgc gccatttccg acgcggcggt agttatgccg
     4021 atattcatca tgcactgatt gaggaaggat atacggactg ggcggagagt ctggttgagt
     4081 atgcgtggaa aaaatggctg gcggatgaaa acttcgcgca tcaggaagtt tcctctatgc
     4141 aaaaactggc cacagacccc ggagagatac cattttgcag tcagtttgcc cgcagcgacg
     4201 atcatgctcg catcggctgt tgtgaggata acgcccgaat cgcaatcgct gggtatgccg
     4261 cgcaaattgc cagtatgggt tatagcgtgc ggattggaag tgtcggcttt aacagtcaca
     4321 ttggcagctc cggtgaacgc gcacgggttg ctgtaaccgg taattcttcg cggataagca
     4381 gcgctggaga tagtagtcgg attgcgaata ccggaatgcg agtacgcgtt tgtacattgg
     4441 gtgaacggtg tcatgtcgcc agtaatggtg acctggtgca aatcgccagc tttggcgcaa
     4501 acgccagaat tgccaacagc ggcgacaatg tacacatcat tgccagcggt gaaaattcaa
     4561 cggtagtgag cacgggcgtg gtcgactcaa ttattctcgg gccaggggga agcgccgcac
     4621 tggcatatca tgacggcgaa agagttcgct tcgccgtcgc cattgaaggt gaaaacaata
     4681 ttcgaaccgg agtccgctat cgtcttaatg aacagcatca gtttgttgag tgctgatagc
     4741 tttaccttta atcaaacgaa agacgccgac gtgcacggga tgcaggtttt acgaccgccc
     4801 gagccatcgc ctcaccaatt tctgcacatg ccgtaagtcc ctgaacgaaa ggctggtcgt
     4861 gcatcaacca gggcaacgcg ccgaacgcta cgcgtccacg aatatcttcg ggttgctgta
     4921 acgtataatc ttcgccaaca tcagggattt catcccctgt tttctgtaat tgctcgcgta
     4981 gcccagggaa aggaatatct ttcactttaa gcggacgct
//
LOCUS       DADMHC010000236         4918 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.239, whole genome shotgun sequence.
ACCESSION   DADMHC010000236 DADMHC010000000
VERSION     DADMHC010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4918)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4918)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4918
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.239"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            45..812
                     /gene="hdhA"
                     /locus_tag="JNZ57_003689"
     CDS             45..812
                     /gene="hdhA"
                     /locus_tag="JNZ57_003689"
                     /EC_number="1.1.1.159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-alpha-hydroxysteroid dehydrogenase"
                     /protein_id="HAY8829742.1"
                     /translation="MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN
                     ADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPK
                     PFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA
                     SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRL
                     GQPQDIANAALFLCSPAASWVSGQILTVSGGGVQELN"
     gene            1041..1631
                     /locus_tag="JNZ57_003690"
     CDS             1041..1631
                     /locus_tag="JNZ57_003690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HAY8829743.1"
                     /translation="MMDNMQTEAQPTRTRILNAAREIFSENGFHSASMKAICKSCAIS
                     PGTLYHHFISKEALIQAIILQDQERALARFREPIEGIHFVDYMVESIVSLTHEAFGQR
                     ALVVEIMAEGMRNPQVAAMLKNKHMTITEFVAQRMRDAQQKGEISPDINTSMTSRLLL
                     DLTYGVLADIEAEDLAREASFAQGLRAMIGGILTAS"
     gene            2018..3829
                     /gene="uidA"
                     /locus_tag="JNZ57_003691"
     CDS             2018..3829
                     /gene="uidA"
                     /locus_tag="JNZ57_003691"
                     /EC_number="3.2.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucuronidase"
                     /protein_id="HAY8829744.1"
                     /translation="MLRPVETPTREIKKLDGLWAFSLDRENCGIDQRWWESALQESRA
                     IAVPGSFNDQFADADIRNYVGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGKVWVNNQ
                     EVMEHQGGYTPFEADVTPYVIAGKSVRITVCVNNELNWQTIPPGMVITDENGKKKQSY
                     FHDFFNYAGIHRSVMVYTTPNTWVDDITVVTHVAQDCNHASVDWQVVANGDVSVELRD
                     ADQQVVATGQGTSGTLQVVNPHLWQPGEGYLYELCVTAKSQTECDIYPLRVGIRSVAV
                     KDEQFLINHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYA
                     EEMLEWADEHGIVVIDETAAVGFNLSLGIGFEAGNKPKELYSEEAVNGETQQAHLQAI
                     KELIARDKNHPSVVMWSIANEPDTRPQGAREYFAPLAEATRKLDPTRPITCVNVMFCD
                     AHTDTISDLFDVLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLHQPIIITEYGVD
                     TLAGLHSMYTDMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADFATSQGILRVGGN
                     KKGIFTRDRKPKSAAFLLQKRWTGMNFGEKPQQGGKQ"
     gene            3826..>4918
                     /gene="uidB"
                     /locus_tag="JNZ57_003692"
     CDS             3826..>4918
                     /gene="uidB"
                     /locus_tag="JNZ57_003692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001075873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronide transporter"
                     /protein_id="HAY8829745.1"
                     /translation="MNQQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAA
                     AAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTD
                     WSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFV
                     CLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLK
                     ISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYERYVLNDTGLFTVLVLVQNLVG
                     TVASAPLVPGMVARSGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQG
                     VTMTVMWALEADTVEYGEYLTGVRIEGLTY"
BASE COUNT         1197 a         1154 c         1314 g         1253 t
ORIGIN      
        1 caggcggtgc cttttatttt tactgaagtt cacaggaggt ttatgtgttt aattctgaca
       61 acctgagact cgacggaaaa tgcgccatca tcacaggtgc gggtgcaggt attggtaaag
      121 aaatcgccat tacattcgcg acagctggcg catctgtggt ggtcagtgat attaacgccg
      181 acgcagctaa ccatgttgta gacgaaattc aacaactggg ggggcaggca tttgcctgcc
      241 gttgtgatat tacttccgaa caggaactct ctgcactggc agactttgct atcagtaagc
      301 tgggtaaagt tgatattctg gttaacaacg ccggtggcgg tggacctaaa ccgtttgata
      361 tgccaatggc ggattttcgc cgtgcttatg aactgaatgt gttttctttt ttccatctgt
      421 cacaacttgt tgcgccagaa atggaaaaaa atggcggtgg cgttattctg accatcactt
      481 ctatggcggc agaaaataaa aatataaaca tgacttccta tgcatcatct aaagctgcgg
      541 ccagtcatct ggtcagaaat atggcatttg acctgggtga aaaaaatatt cgggtgaatg
      601 gcattgcgcc gggggcaata ttaaccgatg ccctgaaatc cgttattaca ccagaaattg
      661 aacaaaaaat gttacagcac acgccgatca gacgtctggg tcaaccgcaa gatattgcta
      721 acgcggcgct gttcctttgc tcgcctgcag ccagctgggt aagcggacaa attctcaccg
      781 tctccggtgg tggggtacag gagctcaatt aatacactaa cgaaccggta aacagccgta
      841 tgtgttgttt accgggatag cgtgtgcaat tcatcaacgt ctctgctaaa caactggcag
      901 ccaaatcacg gctattggtt aaccaatagc tggatgaaaa gcatacgaat agagtgtgcc
      961 ttagcactat tcaacagcaa tgataggcgc tcacctgaca acgcggtaaa ctagttattc
     1021 acgctaacta taatggttta atgatggata acatgcagac tgaagcacaa ccgacacgga
     1081 cccggatcct caatgctgcc agagagattt tttcagaaaa tggatttcac agtgcctcga
     1141 tgaaagccat ctgtaaatcc tgcgccatta gtcccgggac gctttatcac catttcatct
     1201 ccaaagaagc cttgattcag gcgattatct tacaggacca ggagagggcg ctggcccgtt
     1261 tccgggaacc gattgaaggg attcattttg ttgactatat ggtcgagtct attgtctctc
     1321 tcacccatga agcctttggg caacgggcgc tggtggtcga aattatggcg gaagggatgc
     1381 gtaacccaca ggtcgccgcc atgcttaaaa ataagcatat gacgatcact gaatttgttg
     1441 cccagcggat gcgtgatgcc cagcaaaaag gcgagataag cccagacatc aacacgtcaa
     1501 tgacttcacg tttactgctg gatctgacct acggtgtact ggccgatatc gaagcggaag
     1561 atctggcgcg tgaagcgtcg tttgctcagg gattacgcgc gatgattggc ggtatcttaa
     1621 ccgcatcctg atcctctcat ttcgcgggct ggtgataact gtgcccgcgt ttcatacttt
     1681 aatttccctg tacaaaatac aatctagccg ggatcggaga attcccccaa aaatattcac
     1741 cgtagccata tgtcatgaga gtttatcgtt ctcaagatgc ccgaacgaac gtttgattgc
     1801 ttattttatg gcttctgtca acgctgtttt aaagattaat gcgatctata tcacgctgtg
     1861 cgtattgcag attttggttt tttgatcgcg gtgtcagttc tttttatttc catttctctt
     1921 ccatgggttt ctcacagata actgtgtgca acacagaatt ggttaactaa tcagattaaa
     1981 ggttgaccag tatttttatt tgaatgagga gtcccttatg ttacgtcctg tagaaacccc
     2041 aacccgtgaa atcaaaaaac tcgacggcct gtgggcattc agtctggatc gcgaaaactg
     2101 tggaattgat cagcgttggt gggaaagcgc gttacaagaa agccgggcaa ttgctgtgcc
     2161 aggcagtttt aacgatcagt tcgccgatgc agatattcgt aattatgtgg gcaacgtctg
     2221 gtatcagcgc gaagtcttta taccgaaagg ttgggcaggc cagcgtatcg tgctgcgttt
     2281 cgatgcggtc actcattacg gcaaagtgtg ggtcaataat caggaagtga tggagcatca
     2341 gggcggctat acgccatttg aagccgatgt tacgccgtat gttattgccg ggaaaagtgt
     2401 acgtatcacc gtttgtgtga acaacgaact gaactggcag actatcccgc cgggaatggt
     2461 gattaccgat gaaaacggca agaaaaagca gtcttacttc catgatttct ttaactatgc
     2521 cgggatccat cgcagcgtaa tggtctacac cacgccgaac acctgggtgg acgatatcac
     2581 cgtggtgacg catgttgcgc aagactgtaa ccacgcgtct gttgactggc aggtggtagc
     2641 aaatggtgat gtcagcgttg aactgcgtga tgcggatcag caggtggttg caactggaca
     2701 aggtaccagc gggactttgc aagtggtgaa tccccacctc tggcaaccgg gtgaaggtta
     2761 tctctatgaa ctgtgcgtca cagccaaaag ccagacagag tgtgatatct acccgctgcg
     2821 cgtcggcatc cggtcagtgg cagtgaagga cgaacagttc ctgattaacc acaaaccgtt
     2881 ctactttact ggctttggtc gtcatgaaga tgcggatttg cgaggcaaag gattcgataa
     2941 cgtgctgatg gtgcacgatc acgcattaat ggactggatt ggggccaact cctaccgaac
     3001 ctcgcattac ccttacgctg aagagatgct cgagtgggca gatgaacatg gcatcgtggt
     3061 gattgatgaa actgcagctg tcggctttaa cctctcttta ggcattggtt tcgaagcggg
     3121 caacaagccg aaagaactgt acagcgaaga ggctgtcaac ggggaaactc agcaggcgca
     3181 cttacaggcg attaaagagc tgatagcgcg tgacaaaaac cacccaagcg tggtgatgtg
     3241 gagtattgcc aacgaaccgg atacccgtcc gcaaggtgca cgagaatatt tcgcgccact
     3301 ggcggaagca acgcgtaaac tcgacccgac gcgtccgatc acctgcgtca atgtaatgtt
     3361 ctgcgacgct cacaccgata ccatcagcga tctctttgat gtgctgtgcc tgaaccgtta
     3421 ttacggatgg tatgtccaaa gcggcgattt ggaaacggca gagaaggtac tggaaaaaga
     3481 acttctggcc tggcaggaga aactgcatca gccgattatc atcaccgaat acggcgtgga
     3541 tacgttagcc gggctgcact caatgtacac cgacatgtgg agtgaagagt atcagtgtgc
     3601 atggctggat atgtatcacc gcgtctttga tcgcgtcagc gccgtcgtcg gtgaacaggt
     3661 atggaatttc gccgattttg cgacctcgca aggcatattg cgcgttggcg gtaacaagaa
     3721 ggggatcttc acccgcgacc gcaaaccgaa gtcggcggct tttctgctgc aaaaacgctg
     3781 gactggcatg aacttcggtg aaaaaccgca gcagggaggc aaacaatgaa tcaacaactc
     3841 tcctggcgca ccatcgtcgg ctacagcctc ggtgacgtcg ccaataactt cgccttcgca
     3901 atgggggcgc tcttcctgtt gagttactac actgacgtcg ctggcgtcgg tgccgctgcg
     3961 gcgggcacca tgctgttact ggtgcgggta ttcgatgcct tcgccgacgt ctttgccgga
     4021 cgagtagtgg acagtgtgaa tacccgctgg ggaaaattcc gcccgttttt actctttggt
     4081 actgcgccgt taatgatctt cagcgtgctg gtattctggg taccgaccga ctggagccat
     4141 agcagcaaag tagtgtatgc atatttgacc tacatgggcc tcgggctttg ctatagcctg
     4201 gtgaatattc cttatggttc acttgctacc gcgatgaccc aacaaccaca atcccgcgcc
     4261 cgtctgggcg cggctcgtgg gattgccgct tcattgacct ttgtctgcct ggcatttctg
     4321 atagggccga gcattaagaa ctccagcccg gaagagatgg tgtcggtata ccatttctgg
     4381 acgattgtgc tggcgattgc cggaatggtg ctttacttca tctgcttcaa atcgacgcgt
     4441 gagaatgtgg tacgtatcgt tgcgcagccg tcattgaaga tcagtctgca aaccctgaaa
     4501 cggaatcgcc cgctgtttat gttgtgcatc ggtgcgctgt gtgtgctgat ttcgaccttt
     4561 gcggtcagcg cctcgtcgtt gttctacgag cgctatgtgt taaatgatac cgggctgttc
     4621 actgtgctgg tactggtgca aaacttggtt ggtactgtgg catcggcacc gctggtgccg
     4681 gggatggtcg cgaggagcgg taaaaagaat accttcctga ttggcgcttt gctgggaacc
     4741 tgcggttatc tgctattctt ctgggtttcc gtctggtcac tgccggtggc gttggttgcg
     4801 ttggccatcg cttcaattgg tcagggcgtt actatgactg tgatgtgggc actggaagct
     4861 gataccgtag aatacggtga atacctgacc ggcgtgcgaa ttgaagggct cacctatt
//
LOCUS       DADMHC010000237         4879 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.240, whole genome shotgun sequence.
ACCESSION   DADMHC010000237 DADMHC010000000
VERSION     DADMHC010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4879)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4879)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4879
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.240"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            62..1861
                     /gene="cysJ"
                     /locus_tag="JNZ57_003693"
     CDS             62..1861
                     /gene="cysJ"
                     /locus_tag="JNZ57_003693"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent assimilatory sulfite reductase
                     flavoprotein subunit"
                     /protein_id="HAY8829746.1"
                     /translation="MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVL
                     NQQPAALAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYK
                     FKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEF
                     FCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSV
                     ATGAVNEIHASPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDAL
                     GVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYAT
                     LTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIAT
                     SQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPAN
                     PETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKD
                     GVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQAL
                     LEVIAEFGGMDTEAADEFLSELRVERRYQRDVY"
     gene            1861..3573
                     /gene="cysI"
                     /locus_tag="JNZ57_003694"
     CDS             1861..3573
                     /gene="cysI"
                     /locus_tag="JNZ57_003694"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001290736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HAY8829747.1"
                     /translation="MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGF
                     KGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKF
                     AGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSN
                     PYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKT
                     TVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGY
                     LPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPI
                     RPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRI
                     TANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERF
                     LPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGN
                     RIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPAR
                     DLWD"
     gene            3648..4382
                     /gene="cysH"
                     /locus_tag="JNZ57_003695"
     CDS             3648..4382
                     /gene="cysH"
                     /locus_tag="JNZ57_003695"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase"
                     /protein_id="HAY8829748.1"
                     /translation="MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNL
                     PGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLK
                     VYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQ
                     SGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTT
                     RKWEPGMSEEETRFFGLKRECGLHEG"
     gene            4647..4799
                     /locus_tag="JNZ57_003696"
     CDS             4647..4799
                     /locus_tag="JNZ57_003696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Hok family toxin"
                     /protein_id="HAY8829749.1"
                     /translation="MLTKYALVAIIVLCFTVLGFTLMVGDSLCELSIRERGMEFKAVL
                     AYESKK"
BASE COUNT         1199 a         1259 c         1390 g         1031 t
ORIGIN      
        1 tctgttttat gggcgctgac agggcgcaga aacagctttg cttactggaa cataacgacg
       61 catgacgaca caggtcccac cttccgcgtt gcttccgttg aacccggagc aactggcacg
      121 ccttcaggcg gccacgaccg atttaacgcc tacccagctt gcctgggttt ctggctattt
      181 ctggggcgta ctcaatcagc agcctgctgc gcttgcagcg acgccagcgc cagccgcaga
      241 aatgccgggt ataactatta tctccgcctc gcaaaccggc aatgcgcgcc gggttgctga
      301 agcattacgc gatgatttat tagcagcaaa actgaacgtt aagctggtga acgcgggcga
      361 ctataaattc aaacaaatcg ccagcgaaaa actgctcatc gtagtgacgt caacgcaagg
      421 ggaaggggaa ccgccggaag aagccgtcgc gctgcataag ttcctgttct ccaaaaaagc
      481 gccaaagctg gaaaacaccg cgtttgccgt gtttagcctc ggcgatagct cttatgaatt
      541 tttctgccag tccgggaaag atttcgacag caagctggcg gaactgggtg gtgaacgcct
      601 gctcgaccgt gtcgatgccg atgttgaata ccaggctgct gccagcgagt ggcgcgcccg
      661 cgtggttgat gcgcttaaat cgcgtgcgcc tgtcgcggca ccttcgcaat ccgtcgctac
      721 tggcgcggta aatgaaatcc acgccagccc gtacagcaaa gacgcgccgc tggtggctag
      781 cctctctgtt aaccagaaaa ttaccgggcg taactctgaa aaagacgttc gccatatcga
      841 aattgactta ggtgactcgg gcctgcgtta ccagccgggt gacgcgctgg gcgtctggta
      901 tcagaacgat ccggcactgg tgaaagaact tgtcgaactg ctgtggctga aaggcgatga
      961 acctgtcacc gtcgagggca aaacgttgcc tctgaacgaa gcgctacagt ggcacttcga
     1021 actgaccgtc aacaccgcca acattgttga gaattacgcc acgcttaccc gcagcgaaac
     1081 actgctgccg ctggtgggcg ataaagcgaa gttacagcat tacgccgcga cgacgccgat
     1141 tgtcgacatg gtgcgtttct ctccggcgca actggatgcc gaagcgctga ttaatctgct
     1201 gcgcccgctg accccgcgcc tgtattccat cgccacctcg caggcggaag tcgagaacga
     1261 agtacacgtc accgttggtg tggtgcgtta cgacgtggaa ggccgagccc gtgccggtgg
     1321 tgcctccagc ttcctcgcgg atcgcgtgga agaagagggc gaagtccgcg tatttatcga
     1381 acataacgat aactttcgcc tgcccgctaa cccggaaacc ccggtgatta tgattggccc
     1441 aggcaccggt attgcgccgt tccgcgcctt tatgcagcaa cgcgccgccg acgaagcgcc
     1501 aggtaaaaac tggctgttct ttggtaatcc gcactttacg gaagacttcc tgtaccaggt
     1561 ggagtggcag cgctacgtca aagatggcgt gctgacacgt atcgatcttg cctggtcgcg
     1621 cgaccaaaaa gaaaaagttt acgtacaaga caaactgcgc gaacagggcg cggagctgtg
     1681 gcgctggatc aatgatggtg cccacattta tgtctgcggc gacgctaatc gcatggcgaa
     1741 agacgttgag caggcacttc tggaagtgat tgccgaattt ggtggcatgg acaccgaagc
     1801 ggcggatgaa tttttaagtg agctgcgcgt agagcgccgt tatcagcgag atgtctacta
     1861 atgagcgaaa aacatccagg gcctttagtg gtcgaaggaa aactgacaga cgccgagcgc
     1921 atgaagcttg aaagcaacta cctgcgcggc accattgcgg aagatttaaa cgacggtctg
     1981 accggcggct ttaagggcga caacttcctg ctgatccgct tccacggcat gtatcagcag
     2041 gatgaccgcg acatccgcgc cgaacgtgct gaacagaagc tggagccgcg ccacgcgatg
     2101 ctgcttcgct gtcgtctgcc gggtggggtg attaccacta aacagtggca ggcgatcgac
     2161 aaatttgccg gtgaaaacac catctatggc agcattcgcc tgaccaaccg ccagacattc
     2221 cagttccacg gcattctgaa aaagaacgtc aaaccggtgc accagatgct gcactcggtc
     2281 ggtcttgatg cgctggcgac agctaacgac atgaaccgta acgtactctg cacctcgaac
     2341 ccttacgagt cgcagctgca cgcggaagcg tacgagtggg cgaagaagat ttctgagcat
     2401 ctgttgcctc gtacccgcgc gtatgcggag atctggctcg accaggaaaa agtcgccact
     2461 actgatgaag aaccgatcct tggtcagacc tacctgccgc gtaagttcaa aaccacggta
     2521 gtgatcccgc cgcagaacga tatcgatctg catgccaacg acatgaactt cgtggcaatc
     2581 gccgaaaacg gcaagctggt aggcttcaac ctgctggtgg gcggtgggct ttctatcgaa
     2641 cacggcaaca agaaaaccta cgcccgcacg gcgagcgagt ttggctatct gccgctggag
     2701 catacgctgg cggtggccga agccgtcgtg acaactcagc gtgactgggg taaccgaacc
     2761 gatcgtaaaa atgccaaaac caaatacacg ctggagcgcg tgggggttga gacgtttaaa
     2821 gcggaagtgg agcgtcgcgc ggggatcaaa tttgaaccga tccgtccata tgagttcacc
     2881 ggacgaggcg atcgtattgg ctgggttaag ggcattgatg ataactggca cctgacgctg
     2941 tttatcgaaa atggtcgcat ccttgattat cccgggcgtc cgctgaaaac cggcctgctg
     3001 gagatcgcga agatccacaa aggcgatttc cgcattacgg cgaaccagaa tctgatcatc
     3061 gccggtgtac cggaaagcga gaaagcgaag atcgagaaga tcgccaaaga gagcgggtta
     3121 atgaatgccg tcacgccgca gcgtgaaaac tcgatggcct gcgtgtcatt cccgacttgc
     3181 ccgctggcga tggcggaagc agagcgtttc ctgccgtctt ttatcgacaa catcgataat
     3241 ttaatggcga aacatggtgt cagcgatgag catatcgtga tgcgtgtaac aggctgcccg
     3301 aacggttgtg gtcgcgcgat gctggcggaa gtgggcctgg tgggtaaagc gccgggtcgc
     3361 tacaacctgc atcttggcgg caaccgcatt gggacacgta tcccacggat gtataaagaa
     3421 aacatcaccg agccggaaat cctggcgtcg cttgatgaac tgatagggcg ctgggcgaaa
     3481 gagcgcgaag cgggtgaagg cttcggcgac tttacggtgc gtgcgggcat cattcgcccg
     3541 gtgctcgatc cggcgcgcga tttgtgggat taaccatcag cccggtcttg taggcctgat
     3601 aagaacgcgt gagcgtcgca tcaggcaagg caaacagtga ggaatctatg tccaaactcg
     3661 atctaaacgc cctgaacgaa ctgccgaagg tagatcgcat tctggcgctg gcggaaacta
     3721 acgccgaact ggaaaaactg gacgctgaag gccgcgtagc ctgggcgctg gataatctgc
     3781 ccggtgaata tgtactttct tccagctttg gcattcaggc ggcggtgagc ctgcatctgg
     3841 tgaatcaaat tcgcccagat attccggtga tcctcaccga tacgggttac ttgttcccgg
     3901 aaacctaccg ctttattgac gagttaacgg acaaactcaa gctcaacctg aaagtgtacc
     3961 gtgctaccga aagcgcagcc tggcaggaag cacgctacgg aaaactgtgg gagcagggcg
     4021 ttgaaggcat tgaaaagtac aatgacatca acaaagtcga accgatgaac cgggctctga
     4081 aagaacttaa cgcgcaaacc tggtttgctg gcctgcgccg tgaacaatcc ggcagtcgcg
     4141 ccaatttacc ggtgctggca attcagcgtg gcgtatttaa agtgctgccg attatcgact
     4201 gggataaccg aactatttat cagtacctgc aaaaacatgg cctgaaatat cacccattat
     4261 gggatgaagg atatttatcg gtcggtgata cccatacaac ccgtaaatgg gaacctggca
     4321 tgtcggaaga agaaacacgt ttctttggct taaaaaggga atgtggattg cacgaagggt
     4381 aaatattgcc ggataaatta aacgcctctg tcagaaatga tgggggcgtt tttattttgc
     4441 gagcagtatt cctgatttta aacgtgaacg ccgctggaag aattatcagg tatagaatgg
     4501 cgtcgggtgc ttgaggctgt ctggcgttaa gcattcgcga ggttccagat ggacaaaagc
     4561 cccaggcgat atttctatca acctgaggcc agcgttcgaa cccaaacaat tcgaatgtta
     4621 gtctcttctt tgcagggagg caagacatgc tgacaaaata tgcccttgtg gcaatcatag
     4681 tgctgtgttt tacagtactg ggattcacgc tgatggtagg cgactcgttg tgtgagttga
     4741 gtatcagaga acgtggtatg gagtttaagg cagttctcgc ttacgaatcg aagaagtagc
     4801 caccacgcgg gggtaaaacc ccgcgtactg aattgtgatg gtttggtctc ctgcaccctt
     4861 ttttaattta tattgttta
//
LOCUS       DADMHC010000238         4852 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.241, whole genome shotgun sequence.
ACCESSION   DADMHC010000238 DADMHC010000000
VERSION     DADMHC010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4852)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4852)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4852
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.241"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(75..317)
                     /gene="dsrB"
                     /locus_tag="JNZ57_003697"
     CDS             complement(75..317)
                     /gene="dsrB"
                     /locus_tag="JNZ57_003697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein DsrB"
                     /protein_id="HAY8829750.1"
                     /translation="MPEKRNCSTLAQSHRRKTMKVNDRVTVKTDGGPRRPGVVLAVEE
                     FSEGTMYLVSLEDYPLGIWFFNEAGHQDGIFVEKAE"
     gene            426..653
                     /gene="yodD"
                     /locus_tag="JNZ57_003698"
     CDS             426..653
                     /gene="yodD"
                     /locus_tag="JNZ57_003698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416463.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide/acid resistance protein YodD"
                     /protein_id="HAY8829751.1"
                     /translation="MKTAKEYSDTAKREVSVDVDALLAAINEISESEVHRSQNDSEHV
                     SVDGREYHTWRELADAFELDIHDFSVSEVNR"
     gene            951..1766
                     /locus_tag="JNZ57_003699"
     CDS             951..1766
                     /locus_tag="JNZ57_003699"
                     /EC_number="3.1.3.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannosyl-3-phosphoglycerate phosphatase-related
                     protein"
                     /protein_id="HAY8829752.1"
                     /translation="MFSIQQPLLVFSDLDGTLLDSHSYDWQPAAPWLSRLREANVPVI
                     LCSSKTSAEMLYLQKTLGLQGVPLIAENGAVIQLAEQWQDIDGFPRIISGISHGEISQ
                     VLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQ
                     FTARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPND
                     APLLEVIDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDHFFSAR"
     gene            complement(1763..3457)
                     /gene="yedQ"
                     /locus_tag="JNZ57_003700"
     CDS             complement(1763..3457)
                     /gene="yedQ"
                     /locus_tag="JNZ57_003700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis regulator YedQ"
                     /protein_id="HAY8829753.1"
                     /translation="MQHETKMENQSWLKKIARRLGPGHVVNLCFIVVLLFSTLLTWRE
                     VVVLEDAYISSQRNHLENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRNAV
                     TEFEQHRDEHAWQIELNRRRTLSVNGVSDALVSEGNLLSRENESLDNEITAALEVGYL
                     LRLAHNTSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRH
                     RAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLD
                     GEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERL
                     DHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQS
                     SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFSHQ
                     AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE
                     MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVCASDNA"
     gene            complement(3628..3810)
                     /locus_tag="JNZ57_003701"
     CDS             complement(3628..3810)
                     /locus_tag="JNZ57_003701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2158 domain-containing protein"
                     /protein_id="HAY8829754.1"
                     /translation="MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFH
                     ETELVPGEGSRSAEEV"
     gene            complement(3889..4806)
                     /locus_tag="JNZ57_003702"
     CDS             complement(3889..4806)
                     /locus_tag="JNZ57_003702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 domain-containing protein"
                     /protein_id="HAY8829755.1"
                     /translation="MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLN
                     AQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCF
                     EGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVA
                     ITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALG
                     KGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPT
                     VLNLILGFIIGGIVVLGVKAVAKIRGQAH"
BASE COUNT         1238 a         1308 c         1156 g         1150 t
ORIGIN      
        1 gactaatggt atttttgtca acatgcgcta acacattctg actggtggtt tcccaccagt
       61 caggctgaat aagattactc tgctttctcc acaaagatac cgtcctgatg ccctgcttca
      121 ttaaagaacc agatgccgag cgggtagtct tccagcgaaa ccaggtacat tgtgccttca
      181 ctaaactcct caactgctag taccacgcca ggacgacgcg gaccgccatc cgttttgact
      241 gttacccgat cattcacctt catcgttttc ctcctgtggc tttgtgccag tgtagaacaa
      301 tttcgttttt ctggcagcgc caggcgcgcg cgagtgctga ttttctcgac ggtctatact
      361 taagagatgc caggcggact taacgactgg cggcaacaac agagtaacgg ttgcgaggaa
      421 agatgatgaa aaccgcaaaa gagtacagcg ataccgcaaa acgtgaggtc agcgtcgatg
      481 tcgatgccct gctggcggcg atcaatgaaa ttagcgaaag cgaagttcat cgcagccaga
      541 acgattctga acacgttagc gtcgatggac gtgaatatca tacatggcgt gaattggcgg
      601 atgccttcga actggatatt catgacttca gcgtctctga agtgaatcgt tgaatgcaca
      661 ataaaaaaat cccgaccctg agggggtcgg gatgaaactt gcttaagcaa gaagcactta
      721 aaaaattcgt tacaccagga aatctgatgt gttcatcacc ttatccgcaa tttttttcgc
      781 tgacaagaaa atattcgcga tatgaatgat taacgctact tatgaataga aatgtgacgt
      841 gcgtcacccc ttggtggctc tggcgtcaac gggatcgctc ccgaaaaaat catctttgat
      901 tatttgtgct gttttgagaa tcatcctggt aaggggagaa ctgcgcgacc atgttttcaa
      961 ttcaacaacc actactggtt tttagcgatc ttgatggcac cctgctggac agtcatagtt
     1021 atgactggca accggctgcc ccctggctca gccgtttacg cgaagcgaat gttcccgtca
     1081 ttctctgtag cagtaaaact tcagcggaaa tgctgtactt gcaaaaaacg ttggggttac
     1141 aaggggtacc actgattgcc gaaaatggcg cagtgatcca gcttgctgaa caatggcagg
     1201 atatagacgg ttttccacgc atcatctcag gtattagcca tggcgaaatc agccaggttt
     1261 taaatacgct acgcgagaaa gaacatttta aattcacgac tttcgatgat gtcgacgatg
     1321 caaccatcgc cgaatggacg ggattaagcc gtagccaggc ggcgctgacg cagctgcatg
     1381 aggcgtcggt aacgctaatc tggcgcgaca gtgacgagcg tatggcacaa tttaccgctc
     1441 gtctgaacga actgggctta cagtttatgc agggtgcgcg cttctggcac gtcctggatg
     1501 cctctgccgg aaaagatcag gccgccaact ggattatcgc gacctatcaa caattatcag
     1561 gcaaacgccc aaccacactt ggcctgggcg atgggccaaa cgatgcgccc ttactggagg
     1621 taatagatta cgcggtgatt gtgaaagggc taaaccgtga aggggtgcat ctgcatgatg
     1681 aggatccggc ccgcgtctgg cgaacgcagc gtgaaggacc ggaaggatgg cgtgaagggc
     1741 tggaccattt tttctccgct cgttaagcgt tatcgctcgc gcatacccga ttacgcccgg
     1801 cctgtttagc gagataaagc cgacggtcag ccagtgactg gagttgttca aaatcataat
     1861 caccggtttc ctcgctgcta cttaccccca acgaggcact gatgcgtatc gtcgtactct
     1921 tagcaatcaa catctctttt tcatttaact tcaggcgaat acgttctgcg acttccgcag
     1981 cctccgtcag actcgcgcct ggcagaatca cacaaaactc ctcaccaccg acccgcccgg
     2041 caacgtcctg cgcacgcaag gaactgctaa ttaatccggc agcatgagaa agaacacggt
     2101 cgcccgcctg atgactaaag cggtcattaa tcgctttaaa atggtcaagg tcgacctgaa
     2161 tgacagaaaa aggatgttgg tgcgtctgac acaatttcgc gagcggacgg gctttttcaa
     2221 acagtgcgcc acgattatat aaacgggtta aggtgtcgtg ccacgcctgc cactgcaacg
     2281 agctttgcag aacatacatg ttgctaacca tccggcgaat cacataccag gagatgagta
     2341 acatggtggt aaagagcgcc cacagcaggg ttaatgcaat gctgatactg ccgaaatcgc
     2401 cgcgcacgcc ttcgcttagc gtatggacgc gcaccagcac accgtcgaaa tggtccagac
     2461 gttcccagct aacatagcga ctgtccatac gaatgccgcc ccgcgtgtca tgttccatcg
     2521 cctgcgccag caaggccagt tcacgaggat caaaaatatt ccctgttgga tggtcaggat
     2581 tggaagaggt caaaaatctc agcttactgt catagagctg atactcacca tcgaggtttt
     2641 tatcgatggc gtttcttaaa aattgctgca tggtacgcac gggaatactc atccccagca
     2701 cgccatacca gtagttatta ctgtctaccg gaacactgac ggtaacctgc ggttcagtat
     2761 tgctggcgtg ttccggttgc gaagtaaacc agcgtaccgc gcggtgacga ttttctcgtt
     2821 gcgaatggcc gataaaccag ggttgggtga catagccgta ataacgcgtt ggtacattgc
     2881 gcgtaaacaa ggtcggctgc gtcgaaacgt aaaatccggc acgcgagaca tacatcgcct
     2941 gttcaaccat cgacgaggtg ttgtgcgcca gtcgcagcaa gtaaccaact tccagtgcag
     3001 cggtaatttc attgtcgagg ctttcatttt cgcgagacag gagattcccc tcgctgacta
     3061 atgcatccga tacgccattg actgacaggg tgcgtcgtcg gttgagttca atttgccagg
     3121 cgtgctcgtc gcgatgctgt tcgaactcgg ttacagcatt acgcagtgaa gtgaaatcca
     3181 gtggcgctac gagagcttcg cgcatgccat tacgcaaaaa gatcagtttg tcgacgttat
     3241 actgcaaatg cttatcgagc gcgttggcta cgttttccag atgattacgc tggctggaga
     3301 tataggcatc ttccagcact accacttcac gccaggtcag caaggtggaa aaaagcaata
     3361 ccacgataaa gcagagatta acgacatgac caggccccag gcggcgtgcg atttttttca
     3421 accagctctg gttttccatt tttgtctcgt gctgcaccct gacgactccc aacctgcttt
     3481 tttatgattc tggcataacc tggcgatagc gtaccgcaaa acagcgataa ttttataatg
     3541 gtggcatgat aaaacgcgac tatcattcat tgcaggcatt ggcacaccag gccggaagtg
     3601 atccggcctg gtgttaatga taccctttca aacttcttcc gcagaacgac tcccctcccc
     3661 cggaacaagc tcggtttcat gaaaagcttc ccgcttgacc ccgtaaccgt cataccaacg
     3721 acactcaacc ataccgctgg agtatccggt gacaatcatc cgcgggccgc cctctttaac
     3781 cgtaacttcc tcactaacca taaagctcat actcgcctcc ttttttcgag tgaaacttgt
     3841 tcaccttagt tgaagatggc gaattttgca taatagcctg tgcgagtatt aatgtgcctg
     3901 accgcgtatt ttcgctacgg ctttcactcc cagcaccact atgccgccga tgataaatcc
     3961 aagaatcaga tttaaaacag tcggtaatat catcgccacc actgcacttt gctgcccggc
     4021 gaaatgttca atggcgtgat gcagcggcgc aataccatgt accacaatcc cgccgccgac
     4081 aaggaacatc gccagcgtgc cgacaatcga taacgctttc atcagccagg gcgcaatgat
     4141 caataaccct ttacctaatg cctgcatcag cgcgctggat ttttccgcca gccaataccc
     4201 caggtcatca atcttaacga taacccctac cagaccgtag acgcccacgg tcactaccag
     4261 cgcgatgcct gaaagcacca gcacctgatt aagcaacggc gcttcggcca caatccccag
     4321 cgtgatggcg acgatttcgg cagacaatat aaaatcggta cgaatcgccc cttttatttt
     4381 gtccttttca aacttcagcg gatcctgcgc cgccagcttc tccagacgct gctggctctg
     4441 cgccggatct tctttatgtt tacgcgcctc cagcatatgc agcactttct ctactccttc
     4501 aaagcagaga aacgcgccac caatcatcaa cagaggcgta atcgcccacg ggataaacgc
     4561 actgatgatc agcgccagcg gcaccagaat cactttatta atcagcgatc ctttcgccac
     4621 gccccagacc acgggaagtt cccggttggc ccgcacgcct gaaacttgtt gcgcattgag
     4681 cgataagtca tcccctaata caccggcggt tttcttcgcc gccagtttgc ccatcacgga
     4741 gatatcgtcc agtagtgtgg cgatatcatc gagcaacgtc agtaaactac tcccggccaa
     4801 aagcattccc tctcattttt attgttgaag ggtgtaagta tgaagcaaaa ac
//
LOCUS       DADMHC010000239         4818 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.242, whole genome shotgun sequence.
ACCESSION   DADMHC010000239 DADMHC010000000
VERSION     DADMHC010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4818
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.242"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            1..1046
                     /locus_tag="JNZ57_003703"
                     /pseudo
     CDS             1..1046
                     /locus_tag="JNZ57_003703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417591.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1434..1810)
                     /gene="rnpB"
                     /locus_tag="JNZ57_003704"
     ncRNA           complement(1434..1810)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="JNZ57_003704"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(1843..2988)
                     /gene="garK"
                     /locus_tag="JNZ57_003705"
     CDS             complement(1843..2988)
                     /gene="garK"
                     /locus_tag="JNZ57_003705"
                     /EC_number="2.7.1.165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312029.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate 2-kinase"
                     /protein_id="HAY8829756.1"
                     /translation="MKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSVPVADG
                     GEGTVEAMIAATQGSERHAWVTGPLGEKVNASWGISGDGKTAFIEMAAASGLELVPAE
                     KRDPLVTTSRGTGELILQALESGATNIIIGIGGSATNDGGAGMVQALGAKLCDANGNE
                     IGFGGGSLNTLNDIDISGLNPRLKDCVIRVACDVTNPLVGDNGASRIFGSQKGASEAM
                     IVELDNNLSHYAEVIKKALHVDVKDVPGAGAAGGMGAALMAFLGAELKSGIEIVTTAL
                     NLEEHIHDCTLVITGEGRIDSQSIHGKVPIGVANVAKKYHKPVIGIAGSLTDDVGVVH
                     QHGIDAVFSVLTSIGTLDEAFRGAYDNICRASRNIAATLAIGMRNAG"
     gene            complement(3085..3975)
                     /gene="garR"
                     /locus_tag="JNZ57_003706"
     CDS             complement(3085..3975)
                     /gene="garR"
                     /locus_tag="JNZ57_003706"
                     /EC_number="1.1.1.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312030.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxy-3-oxopropionate reductase"
                     /protein_id="HAY8829757.1"
                     /translation="MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAA
                     GAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLA
                     SREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVV
                     HTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLD
                     AKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGT
                     ADHSALACYYEKLAKVEVTR"
     gene            complement(4005..4778)
                     /gene="garL"
                     /locus_tag="JNZ57_003707"
     CDS             complement(4005..4778)
                     /gene="garL"
                     /locus_tag="JNZ57_003707"
                     /EC_number="4.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000445064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxyglucarate aldolase"
                     /protein_id="HAY8829758.1"
                     /translation="MESLPVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDW
                     LVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVE
                     TKEEAEQAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVD
                     NVDAIAATEGVDCIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILA
                     PVEADARRYLEWGATFVAVGSDLGVFRSATQKLADTFKK"
BASE COUNT         1256 a         1278 c         1047 g         1237 t
ORIGIN      
        1 gacctctatt caaatggtca ctttacttaa cgcgttacaa ccaggtggaa aatgcattat
       61 cactggtgat tttcaaaaag aattagcgta cttacaaaat gtaattcttt ataatgactc
      121 gtttcttcgt ctggattttt taggttataa cgcccaaatt attcaacgat cggacaatac
      181 ctgcgaactt accattaatg aaccgttaaa aaaccaggaa atatctacag gcaatatcaa
      241 tgttaattgt ccattaaaag atatttacaa tgaaatcagg aggttgaacg taatctttag
      301 ttgtgggact ggagatatag ttgatctatc ctctctggac ttacgtaatg tcgatttaga
      361 ttattatgat ttcacagata aacatatggc taatactatt ctaaatcctt ttaaattgga
      421 ttcaacaaat tttactaatg ccaacatgtt tcaggttaat tttgttagtt caacacaaaa
      481 cgccacaatc tcctgggatt atttactaaa aataacgcct gttttaataa gtattagcga
      541 tatgtattct gaagaaaaaa tcaagtttgt cgaaagttgt ttaaatgagc ttggggacat
      601 taccgaagaa caattaaaaa ttatgagatt tgcaattata aaatctatac caagggcaac
      661 tcttacagat aaattagaaa atgaattaac aaaagaaata tataaaagct catcgaaaat
      721 caacaattgc ttgaacagaa ttaaattacc aaagatgaaa gaattctcat caaaaaaata
      781 tatgattaca tcgatataat cattgaagat tatgaaaata tcaaagaaaa tgcttatctg
      841 gtcgtccccc aaattaatta tactatggat ttaaacatag aagactccag ctcagaagag
      901 ttaataccct cgagaaagac gaaaattctt cggacaatgg ctttgaagtc gaagaatata
      961 acgcatatga agcatataac tcagggaatc tatattttac cagagaggaa tatacgtatg
     1021 attacgacct tttaaatgca atatagactt aataacttct tacaaaatct ataattaata
     1081 ccgtagatat tcattcatct taccctgtgc accaaaagca aaaactcact gacgcgggtt
     1141 tgaaactgat ggcaaccgca aaaatgcctg atgcgctacg cttatcaggc ctacgccagc
     1201 tctgcaatat attgaatttg cgtgcttttg taggcaggat aaggcgttca cgccgcatcc
     1261 ggcatgaata aagcgcactc aacaatctga aacccgccgg aacggtttat tacgtacatc
     1321 aggtgaaact gaccgataag ccgctttctt ttgggtatag tgtcgtggac agtcattcat
     1381 ctttctgccc ctccaaaagc aaaaaaccgc cgaagcgggt ttttacgtaa atcaggtgaa
     1441 actgaccgat aagccgggtt ctgtcgtgga cagtcattca tctaggccag caatcgctca
     1501 ctggctcaag cagcctaccc gggttcagta cgggccgtac cttatgaacc cctatttggc
     1561 cttgctccgg gtggagttta ccgtgccacg gactgttacc agccgcgcgg tgcgctctta
     1621 ccgcaccctt tcacccttac ctgatcccgc ttgcgcgggc catcggcggt ttgctctctg
     1681 ttgcactggt cgtgggtttc ccccccaggc gttacctggc accctgccct atggagcccg
     1741 gactttcctc ccctccgccc gtctcccccg aagaggacga cgacgaagcg gcgactgtct
     1801 ggtcagcttc ggcgcgcagt atagagggtt tgcgcgccct tgtcaccccg cgttgcgcat
     1861 tccaatcgcc agtgtcgcgg cgatattacg tgaagcacgg cagatattgt cataagcccc
     1921 gcggaatgct tcgtccaacg tacctatgct ggtcaatacg ctgaagaccg catcaatgcc
     1981 atgctgatgt acaacgccaa catcatcggt caggctaccc gcaatgccaa tcaccggttt
     2041 atggtacttc ttcgccacgt ttgcgacacc aatcggtacc ttgccgtgaa tactctggct
     2101 gtcaatacgc ccttcaccgg tgatcaccag cgtacaatcg tgaatatgtt cttccagatt
     2161 cagcgccgta gtgacgattt caataccact tttcagttcc gcaccaagaa acgccatcag
     2221 cgccgcgccc ataccgcccg cagctcctgc gccggggaca tctttcacat caacatgcag
     2281 cgctttttta atgacctcgg catagtgaga gaggttattg tccagctcaa caatcatcgc
     2341 ttcactggct cccttttgtg agccaaagat gcgcgatgcg ccgttatcgc ccaccagcgg
     2401 attggtgaca tcacaagcga cgcgaatgac gcaatctttt aagcgcggat tgaggccgga
     2461 aatatcaata tcattcagag tattaagact accgccgcca aaaccaattt cattgccgtt
     2521 ggcgtcgcat aatttcgccc ccagcgcctg taccatgcct gcgccgccat catttgtagc
     2581 gctgccgcca atgccgataa taatgtttgt cgcaccgctc tccagcgcct gcaggattaa
     2641 ctcgcctgtg ccgcgtgaag tggtcacgag tggatcgcgt ttttccgcag gtaccagctc
     2701 cagcccactg gccgccgcca tttcaataaa cgcggttttg ccatcgccgg agatccccca
     2761 actggcattc actttctcgc ccaacggccc tgtaacccag gcgtgacgtt cggaaccctg
     2821 ggtggctgca atcatcgctt ccaccgttcc ttcgccaccg tcggcaaccg gaacagaaac
     2881 gtactgtgca tcaggaaaaa tttcccgaaa tcctttttct atcgcctgcg caacctcgct
     2941 ggcagataaa ctttctttat aagagtctgg ggcgattacg attttcatac ctatgcctgt
     3001 taccacatga cgccggaggg cgtttctctt attcggcgtg gattccaggc ccggattgca
     3061 atacgccatc cgggcacgac gtcattaacg agtaacttcg actttcgcca gtttttcgta
     3121 gtagcacgcc agagcgctat gatccgccgt tcctaaacca tctgcacgca gtgcctgcat
     3181 catctccata accgcagctg tgagcggcag ttgcgcgccg acgccgtgag aagtatccag
     3241 cgcattcgcc agatccttaa tatgcagatc aatgcggaag cccggcttga agttgcggtc
     3301 catcaccatc ggcgctttgg catccagcac ggtactgccc gccagcccac cgcgaattgc
     3361 ctgataaacc aggtccgggt taacgcccgc tttagttgcc agcgttaacg cttctgacat
     3421 cgcagcaata ttcagcgcca caatgacctg atttgccagt ttggtgacgt tacctgcacc
     3481 gatttccccg gtatgcacca cggaacccgc catcgctttc atcaaatcat agtatttgtc
     3541 gaaaatagcc ttgtcgccgc ccaccatcac tgacagcgta ccgtcgatgg ctttcggttc
     3601 accgccgctc accggagcat ccagcatatc aatgcctttc gctttcagcg cttcgctgat
     3661 ttcacggctt gccagcggtg cgatagaact catatcgatc aataccgtac ctggcttcgc
     3721 gccttcaata atgccattct cacccagcgc cacctctttc acatgagggg agtttggcag
     3781 catggttatg atgacgtcgc actgttcagc gatcgcttta gccgtagacg ctgtttctgc
     3841 acctgcagca atcacgtcag caatagcttc tgggttacgg tcagcaacca ccagcgagta
     3901 acctgctttc agaaggtttt tactcattgg tttacccata atccccaggc caataaaacc
     3961 aactttcata gtcatatcaa tcatctctct tgttgcggtg gtggttattt tttaaaggta
     4021 tcagccagtt tctgagtggc agagcggaag acgccaagat cgctgccgac agccacaaac
     4081 gtcgcgcccc attccagata acgacgcgca tcggcttcga ccggcgcgag aataccgctg
     4141 ggtttgccgt gcgcactggc acggttaaaa atatgctgaa ttgctttttg tacatccgga
     4201 tgcgaggcat tgccgagatg gcccaatgcc gcagccagat cgctggggcc gacgaagata
     4261 cagtctacac cttcggtagc ggcaatagca tcgacgttat ctacgccctg ctgactttct
     4321 atctggacca gaatagtgat gttcttgttc gactgagcga aataatccgc cacggtgcca
     4381 aacatattgg cgcggtgaga aacggagacg ccgcgaatgc cttccggcgg gtaacgagtt
     4441 gatgccaccg cctgctctgc ttcctctttt gtttctacaa aaggaatcag gaagttatag
     4501 aaaccgatat ccagaagacg cttaataatt accggctcgt tggtcggcac tcgcactact
     4561 ggcgcgctgg cgctgccttt cagggccatt aactgcggaa taaacgtgga aatatcgttt
     4621 ggcgcatgtt cgccatccag caccagccag tcaaacccag ccaaaccaag aacttcagtg
     4681 ctaatcgggt tagagagtgc tgaccagcaa ccaatttgta cctgtttcgc agccagtgcg
     4741 gctttgaatt tattcgggaa aacaggtaat gactccaact tattgatagt gttttatgtt
     4801 cagataatgc ccgatgac
//
LOCUS       DADMHC010000240         4795 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.243, whole genome shotgun sequence.
ACCESSION   DADMHC010000240 DADMHC010000000
VERSION     DADMHC010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4795)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4795)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4795
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.243"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..800
                     /locus_tag="JNZ57_003708"
     CDS             <1..800
                     /locus_tag="JNZ57_003708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001079584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HAY8829759.1"
                     /translation="SITNLNNQVTNLDTRVTNIENGIGDIVTTGSTKYFKTNTDGVDA
                     NAQGKDSVAIGSGSIAAADNSVALGTGSVAEEENTISVGSSTNQRRITNVAAGVNATD
                     AVNVSQLKSSEAGGVRYDTKADGSIDYSNITLGGGNGSTTRISNVSAGVNNNDAVNYA
                     QLKQSVQETKQYTDQRMVEMDNKLSKTESKLSGGIASAMAMTGLPQAYTPGASMASIG
                     GGTYNGESAVALGVSMVSANGRWVYKLQGSTNSQGEYSAALGAGIQW"
     gene            1168..2823
                     /gene="lldP"
                     /locus_tag="JNZ57_003709"
     CDS             1168..2823
                     /gene="lldP"
                     /locus_tag="JNZ57_003709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HAY8829760.1"
                     /translation="MNLWQQNYDPAGNIWLSSLIASLPILFFFFALIKLKLKGYVAAS
                     WTVAIALAVALLFYKMPVANALASVVYGFFYGLWPIAWIIIAAVFVYKISVKTGQFDI
                     IRSSILSITPDQRLQMLIVGFCFGAFLEGAAGFGAPVAITAALLVGLGFKPLYAAGLC
                     LIVNTAPVAFGAMGIPILVAGQVTGIDSFEIGQMVGRQLPFMTIIVLFWIMAIMDGWR
                     GIKETWPAVVVAGGSFAIAQYLSSNFIGPELPDIISSLVSLLCLTLFLKRWQPVRVFR
                     FGDLGASQVDMTLAHTGYTAGQVLRAWTPFLFLTATVTLWSIPPFKALFASGGALYEW
                     VINIPVPYLDKLVARMPPVVSEATAYAAVFKFDWFSATGTAILFAALLSIVWLKMKPS
                     DAISTFGSTLKELALPIYSIGMVLAFAFISNYSGLSSTLALALAHTGHAFTFFSPFLG
                     WLGVFLTGSDTSSNALFAALQATAAQQIGVSDLLLVAANTTGGVTGKMISPQSIAIAC
                     AAVGLVGKESDLFRFTVKHSLIFTCMVGVITTLQAYVLTWMIP"
     gene            2823..3599
                     /gene="lldR"
                     /locus_tag="JNZ57_003710"
     CDS             2823..3599
                     /gene="lldR"
                     /locus_tag="JNZ57_003710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LldR"
                     /protein_id="HAY8829761.1"
                     /translation="MIVLPRRLSDEVADRVRALIDEKNLEAGMKLPAERQLAMQLGVS
                     RNSLREALAKLVSEGVLLSRRGGGTFIRWRHDTWPEQNIVQPLKTLMADDPDYSFDIL
                     EARYAIEASTAWHAAMRATPGDKEKIQLCFEATLSEDPDIASQADVRFHLAIAEASHN
                     IVLLQTMRGFFDVLQSSVKHSRQRMYLVPPVFSQLTEQHQAVIDAIFAGDADGARKAM
                     MAHLSFVHTTMKRFDEDQARHARITRLPGEHNEHSREKNA"
     gene            3596..4786
                     /gene="lldD"
                     /locus_tag="JNZ57_003711"
     CDS             3596..4786
                     /gene="lldD"
                     /locus_tag="JNZ57_003711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent L-lactate dehydrogenase"
                     /protein_id="HAY8829762.1"
                     /translation="MIISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSE
                     VALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIP
                     FTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPT
                     PGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLE
                     DYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHG
                     GRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLY
                     ALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELPAALAPMAK
                     GNAA"
BASE COUNT         1055 a         1273 c         1301 g         1166 t
ORIGIN      
        1 agagcattac taacctgaac aatcaggtca ctaatctgga tactcgcgtt actaatatcg
       61 aaaacggtat tggcgacatt gtcaccaccg gtagcaccaa gtacttcaag accaacaccg
      121 atggcgtaga tgccaacgcc cagggtaaag atagcgttgc tattggttct ggttccattg
      181 ctgccgctga caacagcgtc gcactgggta ccggttccgt tgcagaggaa gaaaatacaa
      241 tctctgtagg ttcttctact aaccaacgcc gtatcaccaa cgtagctgcc ggtgttaatg
      301 ccaccgatgc ggttaacgtg tcgcagctga aatcttctga agcaggcggc gtgcgctacg
      361 acaccaaagc tgatggttct atcgactata gcaatatcac cctcggtggt ggcaacggca
      421 gtacgactcg tatcagcaac gtctccgctg gcgtcaacaa caacgacgcg gtgaactacg
      481 cgcagttgaa gcaaagcgtg caggaaacga agcaatacac cgatcagcgg atggttgaga
      541 tggataacaa actgtctaaa actgaaagca agttgagcgg tggtatcgct tctgcaatgg
      601 caatgaccgg tctgccgcag gcttatacac cgggtgccag catggcttct attggtggcg
      661 gtacttacaa cggtgaatcg gcagttgctt taggtgtatc gatggtgagc gccaatggtc
      721 gttgggtcta caaattacaa ggtagtacca atagccaggg tgaatactcc gccgcactcg
      781 gtgccggtat tcagtggtaa tgatccatta agttagtgtg actaagggca aacgccaaat
      841 tgcctgatgc gttacgcgca tcaggcaaga taaggcgctc cgggtcaaca atctaagggc
      901 aattctctga tgaggattgc ccttttcttt accagacatc tccccccaca agaattggcc
      961 ctaccaattc ttcgcttatc tgacctctgg ttcacaattc cccaattaaa actcacatca
     1021 atattgccaa tacacaacat ttagttaacc attcattgtc attatcccta cacaacacaa
     1081 ttggcagtgc cacttttaca caacgtgtga caaggagatg agcaacagac tcattacacg
     1141 atgtgcgtgg actccaggag acctgcaatg aatctctggc aacaaaacta cgatcccgcc
     1201 gggaatatct ggctttccag tctgatagca tcgcttccca tcctgttttt cttctttgcg
     1261 ctgattaagc tcaaactgaa aggatacgtc gccgcctcat ggacggtagc aatcgccctt
     1321 gccgtggctt tgctgttcta taaaatgccg gtcgctaacg cgctggcctc ggtggtttat
     1381 ggcttcttct atggtttgtg gcccatcgcg tggatcatta ttgcagcagt gttcgtctat
     1441 aagatctcgg tgaaaaccgg gcagtttgac atcattcgct cgtctattct ttcgataacc
     1501 cctgaccagc gtctgcaaat gctgatcgtc ggtttctgtt tcggcgcttt ccttgaagga
     1561 gccgcaggct ttggcgcacc ggtagcaatt accgccgcat tgctggtcgg cctgggtttt
     1621 aaaccgctgt acgccgccgg actgtgcctg attgttaaca ccgcgccagt ggcatttggc
     1681 gcgatgggca ttccaatcct agttgccgga caagtaacag gcatcgacag ttttgagatt
     1741 ggccagatgg tggggcgtca gctaccgttt atgaccatta tcgtgctgtt ctggatcatg
     1801 gcgattatgg acggctggcg cggtatcaaa gagacgtggc ctgcggtcgt ggttgcgggc
     1861 ggctcgtttg ccatcgctca gtaccttagc tccaacttca ttgggccgga gctgccggac
     1921 attatctctt cgctggtatc actgctctgc ctgacgctgt tcctcaaacg ctggcaacca
     1981 gttcgcgtat tccgcttcgg tgacttgggg gcgtcacagg ttgatatgac gctggcccac
     2041 accggttaca ccgcgggtca ggtgttacgt gcctggacac cgttcctgtt cctgaccgct
     2101 accgtaacac tgtggagcat cccgccgttt aaagccctgt tcgcatcggg tggtgcgctg
     2161 tatgagtggg tgatcaacat tccggtgccg tacctcgata aactggttgc ccgtatgcca
     2221 ccagtggtca gcgaggctac agcctatgcc gccgtgttta agtttgactg gttctctgcc
     2281 accggcaccg ccattctgtt tgctgcactg ctctcgattg tctggctgaa gatgaaaccg
     2341 tctgacgcta tcagcacctt cggcagcacg ctgaaagaac tggctctacc catctactcc
     2401 atcggcatgg tgctggcgtt cgcctttatc tcgaactatt ccggactgtc atcaacactg
     2461 gcactggcac tggcgcacac cggtcatgca ttcaccttct tctcgccgtt cctcggctgg
     2521 ctgggggtat tcctgaccgg gtcggatacc tcatctaacg ccctgttcgc cgcgctgcaa
     2581 gccaccgcag cacaacaaat tggcgtctct gatctgttgc tggttgccgc caataccacc
     2641 ggtggcgtca ccggtaagat gatctccccg caatctatcg ctatcgcctg tgcggcggta
     2701 ggcctggtgg gcaaagagtc tgatttgttc cgctttactg tcaaacacag cctgatcttc
     2761 acctgtatgg tgggcgtgat caccacgctt caggcttatg tcttaacgtg gatgattcct
     2821 taatgattgt tttacccaga cgcctgtcag acgaggttgc cgatcgtgtg cgggcgctga
     2881 ttgatgaaaa aaacctggaa gcgggcatga agttgcccgc tgagcgccaa ctggcgatgc
     2941 aactcggcgt atcacgtaat tcactacgcg aggcgctggc aaaactagtg agcgaaggcg
     3001 tgctgctcag tcgacgcggc ggcgggacgt ttattcgctg gcgtcatgac acatggccgg
     3061 agcaaaacat cgtccagccg ctaaaaacgc tgatggccga tgatccggat tacagtttcg
     3121 atattctgga agcccgctac gccattgaag ccagcaccgc atggcatgcg gcaatgcgcg
     3181 ccacacctgg cgacaaagaa aagattcagc tttgctttga agcaacgcta agtgaagacc
     3241 cggatatcgc ctcacaagcg gacgttcgtt ttcatctggc gattgccgaa gcctcacata
     3301 acatcgtgct gctgcaaacc atgcgcggtt tcttcgatgt cctgcaatcc tcagtgaagc
     3361 atagccgtca gcggatgtat ctggtgccac cggttttttc acaactgacc gaacaacatc
     3421 aggctgtcat tgacgccatt tttgctggtg atgccgacgg ggcgcgtaaa gcaatgatgg
     3481 cgcaccttag ttttgttcac accaccatga aacgattcga tgaagatcag gctcgccacg
     3541 cacggattac ccgcctgccc ggtgagcata atgagcattc gagggagaaa aacgcatgat
     3601 tatttccgca gccagcgatt atcgcgccgc agcgcaacgc attctgccgc cgttcctgtt
     3661 ccactatatg gatggtggtg catattctga atacacgctg cgccgcaacg tggaagattt
     3721 gtcagaagtg gcactgcgcc agcgtattct gaaaaacatg tccgacttaa gcctggaaac
     3781 gacgctgttt aatgagaaat tgtcgatgcc ggtagcactg gcaccggtgg gtttgtgtgg
     3841 catgtatgcg cgtcgtggcg aagttcaggc agccaaagcg gcggacgcgc atggcattcc
     3901 gtttactctc tcgacggttt ccgtttgccc gattgaagaa gtcgcgccag ccatcaagcg
     3961 cccaatgtgg ttccagcttt atgtactgcg cgatcgcggc tttatgcgta acgcgctgga
     4021 gcgagcaaaa gcagcgggtt gttcgacgct ggttttcacc gtggatatgc cgacaccggg
     4081 cgcacgctac cgtgatgcgc attcaggtat gagcggccca aatgcggcaa tgcgccgcta
     4141 cttgcaggcg gtgacgcatc cgcaatgggc gtgggatgtg ggcctgaacg gtcgtccaca
     4201 tgatttaggt aatatctcag cttatctcgg caaaccaacc ggactggaag attacatcgg
     4261 ctggctgggg aataacttcg atccgtccat ctcatggaaa gaccttgagt ggatccgcga
     4321 tttctgggat ggcccgatgg tgatcaaagg gatcctcgat ccggaagatg cgcgcgatgc
     4381 agtacgtttt ggtgctgatg gaattgtggt ttctaaccac ggtggccgcc agctggacgg
     4441 tgtactctct tccgctcgtg cgttgcccgc tattgcagat gcggtgaaag gtgatatcgc
     4501 cattctggcg gatagcggaa ttcgtaacgg gcttgatgtc gtgcgtatga ttgcgctcgg
     4561 tgccgacacc gtactgctgg gtcgtgcttt cctgtatgcg ctggcaacag cgggccaggc
     4621 gggtgtagct aacctgctaa atctgatcga aaaagagatg aaagtggcga tgacgctgac
     4681 tggcgcgaaa tcgatcagtg aaattacgca agattcgctg gtgcaagggc tgggtaaaga
     4741 gttgcctgcg gcactggctc ccatggcgaa agggaatgcg gcatagtcgt ttgcg
//
LOCUS       DADMHC010000241         4755 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.244, whole genome shotgun sequence.
ACCESSION   DADMHC010000241 DADMHC010000000
VERSION     DADMHC010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4755)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4755)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4755
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.244"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(65..960)
                     /locus_tag="JNZ57_003712"
                     /pseudo
     CDS             complement(65..960)
                     /locus_tag="JNZ57_003712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312014.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            1065..1766
                     /locus_tag="JNZ57_003713"
     CDS             1065..1766
                     /locus_tag="JNZ57_003713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HAY8829763.1"
                     /translation="MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLN
                     QEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYS
                     EHNLSKDKPLTRMQLWLDACPQRENPLIQKLALNMGKQQLIASPEGTMGSLQLRQQVW
                     LHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITL
                     VADSPLRALLIDLPV"
     gene            1789..1953
                     /locus_tag="JNZ57_003714"
     CDS             1789..1953
                     /locus_tag="JNZ57_003714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312016.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829764.1"
                     /translation="MSKKSAKKRQPVKPVVAKEPARTAKNFGYEEMLSELEAIVADAE
                     TRLAEDEATA"
     gene            complement(2087..3397)
                     /locus_tag="JNZ57_003715"
     CDS             complement(2087..3397)
                     /locus_tag="JNZ57_003715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine dehydratase subunit alpha family protein"
                     /protein_id="HAY8829765.1"
                     /translation="MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAEL
                     EGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQ
                     AIADAKALLAAGKVSVKIQEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNS
                     VVFTQQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEG
                     LSGKWGLHIGATLEKQCERGLLAKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQ
                     GITATMSVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAA
                     GMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDT
                     AVTGNEGIVAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR"
     gene            complement(3425..>4755)
                     /locus_tag="JNZ57_003716"
     CDS             complement(3425..>4755)
                     /locus_tag="JNZ57_003716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026203.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
                     /protein_id="HAY8829766.1"
                     /translation="EIASNKGVIADASTPAGRAGMSESEWREAIKFDRTDTGWVIMSI
                     GMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSVI
                     SGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLV
                     LICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVK
                     NAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFY
                     AVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFGV
                     YLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVLSFTSI
                     CSPIFGMVGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSPFLAFS"
BASE COUNT         1204 a         1378 c         1135 g         1038 t
ORIGIN      
        1 ttggttcaaa ttaatcttag aattggggcg atatttcgcc cctttttatt aacaataata
       61 aatattattt tccgctaaaa agtttgggaa tttcccgcag acaccaggat ttcgcttccc
      121 ccatactgtc acgacgccag gccataataa tatcgatctc gctggtcgat tccgggctga
      181 cgacacgcaa ccgcccttcc gcaatatctt tttcgaccat cggatacggc atcgtcgcca
      241 cgccaagccc cgccagtaat gcctgacgtt tatcttcaat cgtgctcacc gttaagcgcg
      301 gctgtttgtc cagcagctgt acggtcaaca ccgggcgctc acgagcggta tccgctaccg
      361 caattccacg atatttcacg cgcgtcactt cagataacgg ttccggctcc tgatgaatcg
      421 ggtgatcagg cgcggcaacg tagacgttca ttaaggtata gagcttgcgc gagttgatct
      481 ccgacgagga acgaaaatgc atatccggcg cgataacgat atccgccccc cctgctccag
      541 tcgttcccac gcccccgcca gcacttcggt gatgattgcc agttgggtat tggcttttgc
      601 cgccagtttg tcgattaacg ggaaaaaggc aggtgtcggt accagcgcct cggtcacaat
      661 ggtgagatgc gtttcccaac cgcgcgcgag ggcttccgca tcggtagtca gtttatctgc
      721 tgcttccagc aaaacgcgcc ctcgctccag caacatcctc ccgacattgg tgaatttggt
      781 gcgatggccc gagcggtcaa acagcaccac atccagctct tcttccagtt tttgcatggt
      841 gtagctaagt gcggaaggca cgcgtcccag ctcatccgcc gccgccgcaa aactgccccg
      901 gcgatcgatc gcatccataa cccgtagtgc ttccagcgtt aatgcccttt ctttggccat
      961 ttcgttctca ttcaggaaat ttgaacatac cgggcagaat atctggctaa caatgtagcg
     1021 tccagcccct taccataaaa ggaagtaaag agaggtcaag aattatgatt actacccgaa
     1081 ctgccaggca gtgtggacaa gcagactacg gatggttgca ggcccggtat actttttcct
     1141 ttggacacta cttcgacccg aaattgttag gctatgcctc cctgcgtgtg cttaaccagg
     1201 aagtgctggc cccaggtgcc gcctttcagc cgcgaaccta tcccaaagtc gatattttaa
     1261 atgtgattct ggatggagaa gcagagtatc gcgacagcga aggcaatcat gttcaggcca
     1321 gcgccggtga ggcgttgctg ctctctaccc agccgggtgt cagctacagc gaacacaatc
     1381 tcagcaaaga caaaccgtta acacgaatgc agctttggct ggacgcctgc ccgcagcgag
     1441 agaatccgct gattcaaaaa ctggcgctta atatgggcaa gcagcaatta atcgcctcgc
     1501 cagagggtac gatgggaagc ctgcaattac gccagcaagt gtggctgcac catatcgtgc
     1561 tcgacaaagg cgaaagtgcg aatttccagt tgcatgggcc acgcgcgtat ttgcaatcga
     1621 ttcacgggaa atttcatgcg cttacgcatc atgaagagaa agcggcgctg acctgcggtg
     1681 atggggcgtt tattcgtgac gaggctaaca ttacgctggt tgccgattcc ccactgcgcg
     1741 ctttgctgat agatttgcct gtctagttgt ttttacaggg agatgatgat gagtaaaaaa
     1801 tcggccaaaa agcgccagcc agtgaagccc gtggtggcga aagaacctgc tcgcaccgcc
     1861 aaaaattttg gctatgaaga gatgttgagc gagctggaag ccatcgtcgc ggatgctgaa
     1921 acgcgtttag ccgaggatga agctaccgcg taaagacagg ttgccggatg cggcgaaaac
     1981 gccttatccg gcctacaaaa tccaacaaca ttaacgaatt aaacaacccg taggccggat
     2041 aaggtgcgcc agcatcgcat ccggcacaat actcaaaacc tggcgtttat ctggccttgc
     2101 tcgccataat ctcgataatc tgccgatccg tttgctgcat cgaatggctt gctaacgcac
     2161 acaggttggc aatcgactgc tcaacatcat gcgccacgat cccttcattg ccggtcacgg
     2221 cggtatcatc cagcgccatt aacaccgctt tccacgcagc cgaagcactg gtcgaaacct
     2281 tcatcgcgca gctgttcgac gcaccatcgc aaatcatgcc gctgacatcg ccgatcatac
     2341 tgctgatcgc catcgagata gtttcataac gcccatccac cagccatgcc atcccggcgg
     2401 cggcccccat tgctgcggtc gttgcggcac aaagtgcaga caaacgcggt aactggttat
     2461 ggatgtaaat tgcgctcaaa tgagaaagca tcagcgcacg cgccagtcgt tcatcatccg
     2521 ctccgaagtg ttctgctaca accaccacag acattgttgc ggtgatcccc tggttacccg
     2581 agccggagtt actcatagcc ggaagcgtag cgccgcccat acgcgcatcg gatgccgcgc
     2641 tggtacgaat cacaatggat gaagagagat ctttcgccag caaaccgcgc tcgcactgtt
     2701 tttccagcgt cgcgccaata tgcagccccc acttaccgct caaaccttcc tgcgataacg
     2761 cacaatttag cttcgcggaa tcgagaataa agcggatcgc cgcaaacggg acttcattga
     2821 cgaacttcag gatctcagcc agcgtcgttc tggaaagcac cgtcagcgga gactcttgct
     2881 cgccctctgc cacacacgcc tgctgggtaa acaccacact attgtgcgtc tcaatatgca
     2941 caatgttggt atgcccgccg acgatggtga cacacgccca cttctcaccg ttccagactt
     3001 tggcgcgtga gaagaggatt tcattgcaag gttcctggat cttaacggag actttccccg
     3061 ccgccagcag tgctttggca tcggcaattg cctgcgcagt tgcgtctttc agcacttcca
     3121 gcccggcgtt ggcatttcca cctaacgccc ccagcgccgc cgcaatcggc agccccacca
     3181 ttcccgtgcc gggaacggtg acgcccagac cgttcttcat cagatttggc gaaacccagg
     3241 cttctacacg ttcaaccgga ccttccagtt ctgccgcagc aaccgccgcc gccagcgcca
     3301 gtgaaatcgg ttcagtacat cccagcgccg gttttacttc ctcctgaacg gcgaggatgt
     3361 aacgctgcca taacggattt aaagtcgaat caaacatatt aaaaacctta aaatttcagg
     3421 taaatcaaga aaatgccagg aacggagaaa cacaaagcaa caaaccagtg acgataatca
     3481 ggtacagaga catccctttg tatttgtgca atgccggtac tttgtaaacc agccacgccg
     3541 ggatcaggca ccctaccatg ccgaaaatcg ggctacagat agaggtgaag ctcaacaccg
     3601 gtgcgttcag tacgatggcg ctccaggcca gcaaaatggc gaaaatcatg atgccgcgct
     3661 gaacaagatt ttcgttaatc ttctcggcag gcatcttgcg acgcaggatg ttcattacga
     3721 tcccttgcgt tgcttcgcga aagcctaaat agacgccaaa gaatgcagtc atgacagcaa
     3781 agatattgag aatgacgctg accactttca cccacgctgc gccgtcaccg ctaataaact
     3841 gtgcggcaat cgccagcgcg gaaatattct gctcgtaggc ttttaccgct tcgtcatgtc
     3901 ccatcgccag cgtgaacgac acggcgtaga aaaagacggt gacaaataaa atgccaaacg
     3961 cgatattcat tgcccgcaat gctttatgcc gcgccacttc aattgatttt tcccgcgagc
     4021 gataagagat caccatcggg cttaacgtct ggataaacag aatcgacgtc agggtaaacg
     4081 gcagcgtaat aatggcgttt ttcaccagca gccccagcgg cggtagcgaa ccgacgttat
     4141 acagatgcca cattcccacc atcgacacgc ccagcgcagc gactaccagc agcttggtca
     4201 gcaccatgcc ggtcgaaatt ttgaataaca atttctcgcc gcgtgaagag atcgccacca
     4261 gaatgcaaat cagtaccaga ccataaaagg gactgtctga cagcaaccct tccgtcacgc
     4321 cgaaggtatg cagataggaa gcactatcgt tggtgatggc ggtggaatag acgaacatcc
     4381 aaatcaccag cattacgaaa tagagcgcac ctaacaggat gccccagttt ttacctaaat
     4441 aaccgctaat gacactcggg taatctttac attctggtga ttctgccagc gtattaataa
     4501 acaaccgctg aaacagatac attgccgggt aaccaatcac cgatgagagc aaaaataccc
     4561 acaatcccat caaaccgacc tgcaccggga gaaaaacaat ccccgcgcca atcgccatcc
     4621 cgatactcat aatcacccag ccggtgtcag ttctgtcgaa tttgatcgct tctcgccact
     4681 cgctctcact cattccagca cgacccgccg gggtcgaagc gtctgcaatg acgcctttat
     4741 tcgatgcaat ttcca
//
LOCUS       DADMHC010000242         4692 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.245, whole genome shotgun sequence.
ACCESSION   DADMHC010000242 DADMHC010000000
VERSION     DADMHC010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4692)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4692)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4692
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.245"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..1335
                     /locus_tag="JNZ57_003717"
     CDS             <1..1335
                     /locus_tag="JNZ57_003717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000874238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialate O-acetylesterase"
                     /protein_id="HAY8829767.1"
                     /translation="FTTGADGTYSDASGASENSTRWGVDKPLYKDLIGRTKAALEKNP
                     KNVLFAVVWMQGEFDFGGTPANHAAQFGALVDKFRADLADMAGQCVGGSAGGVPWICG
                     DTTYFWKQKNESTYQTVYGSYKNKTEKNIHFVPFMTDENGVNVPTNKPEEDPDIPGIG
                     YYGSKWRDSSATWTSQDRASHFSSWARRGIISDRLATAILSCAGKSSAFVNGTAGVVV
                     PDRPVTTSESVIFYDAKKATDNQLKPYGWDGMYGRRTLVDDSGNKALRIEKNNSAKSW
                     SMYCDIAADKAKLLLEKGGEIAVRFKIPENVNLETTRNKYAFGLYWRIAEWPGEGGEG
                     HLSSFFVQTDKASINIAYHHTVNQQKELGTFGAFDHDWHTLAFKFKGSNSINVTPVLD
                     GVDGQAFDLVKWANTANGLNRFVITDITGSAETYPVLIDTVEVKANKAGAAA"
     gene            1474..1656
                     /locus_tag="JNZ57_003718"
     CDS             1474..1656
                     /locus_tag="JNZ57_003718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000142783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1378 family protein"
                     /protein_id="HAY8829768.1"
                     /translation="MTFIHQVMLYFCTAVCVLYLLSGGYRAVRDFWCRQIDKRAAEKI
                     SASQSAGSKPEEPVTP"
     gene            1580..1909
                     /locus_tag="JNZ57_003719"
     CDS             1580..1909
                     /locus_tag="JNZ57_003719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001427342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF826 domain-containing protein"
                     /protein_id="HAY8829769.1"
                     /translation="MIKGPLRKSAPVSQPEANPKNPLLLNNPFQRENPMSEITSLVTA
                     EAVKEVRSALKQKLRQNLESRLDAEVDAILDELLGVAAVPEPEGIAGDGSASDGGEPT
                     PDSDMMM"
     gene            1986..2201
                     /locus_tag="JNZ57_003720"
     CDS             1986..2201
                     /locus_tag="JNZ57_003720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HAY8829770.1"
                     /translation="MYQMEKITTGVSYTTSAVGTGYWFLQLLDRVSPSQWAAIGVLGS
                     LLFGLLTYLTNLYFKIREDRRKAARGE"
     gene            2206..2550
                     /locus_tag="JNZ57_003721"
     CDS             2206..2550
                     /locus_tag="JNZ57_003721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdfR family protein"
                     /protein_id="HAY8829771.1"
                     /translation="MKKKYELVVKGINNYPNKITVTVALEIGGYPSLLLPDVAISLDR
                     TEDATLEFYEAEAKKQAKQFFMDVAAGLCEGDGPLPEKRPVILEAQDVLITYRGKLPG
                     IITGSLKTPPLA"
     gene            2601..3134
                     /locus_tag="JNZ57_003722"
     CDS             2601..3134
                     /locus_tag="JNZ57_003722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HAY8829772.1"
                     /translation="MNTKIKYGLSAAVLALIAAGAPAPEILDQFLDEKEGNHTTAYRD
                     GAGIWTICRGAILVDSKPVVPGMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQK
                     AGIASFCPYNIGPGKCFPSTFYRRINAGDRRGACEAIRWWIKDGGRDCRIRSNNCYGQ
                     VSRRDQESALACWDIDR"
     gene            3291..3473
                     /locus_tag="JNZ57_003723"
     CDS             3291..3473
                     /locus_tag="JNZ57_003723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310767.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829773.1"
                     /translation="MAKYKRILLRLTMKNGLELKAPVTDDISRALAFAIKWMAVGVAV
                     SPMLYGLAKLVIALKS"
     gene            3631..4089
                     /locus_tag="JNZ57_003724"
     CDS             3631..4089
                     /locus_tag="JNZ57_003724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001487958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysis protein"
                     /protein_id="HAY8829774.1"
                     /translation="MLSAFTVILLVVCGALWLATDHYRDNAITYKAQRDKKARELELA
                     NATITDMQQRQRDVAALDARYSRELADARAENETLRADVAAGRKRLRINATCSGTVRE
                     ATGTSGMDNATGPRLADTAERDYFTLRERLMTMQKQLEGAQEYIRTQCIN"
     gene            4113..4337
                     /locus_tag="JNZ57_003725"
     CDS             4113..4337
                     /locus_tag="JNZ57_003725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829775.1"
                     /translation="MKKLLVTVKPFQGTIPFRILQRGRVLVEGSFSGKCTQLHSRTFQ
                     VNATNEELTVECTMNAAKCRMVSAALQPVC"
BASE COUNT         1225 a         1021 c         1337 g         1109 t
ORIGIN      
        1 ttcaccaccg gagctgatgg cacatacagt gacgcgagtg gtgcctcgga gaattcaacc
       61 cgctggggtg tggacaagcc gctgtataag gaccttatcg gtcgaacaaa agcggcactg
      121 gagaagaacc cgaaaaatgt gctgtttgcc gtggtgtgga tgcaggggga atttgatttt
      181 ggcggtacgc cggcaaatca tgccgcacag tttggtgcgc tggttgataa attccgtgca
      241 gacctggcgg atatggcagg ccagtgcgtc ggtggctctg ctggcggtgt tccctggata
      301 tgcggggaca cgacgtattt ctggaagcag aagaacgaat ccacgtacca gacggtgtac
      361 ggcagctata aaaataaaac ggaaaagaat atccatttcg taccgttcat gaccgatgag
      421 aacggggtga atgtgccgac gaacaaaccg gaagaagacc cggacattcc gggtatcggt
      481 tattacggtt cgaaatggcg tgacagctca gccacctgga cgtcacagga cagggcgagc
      541 catttcagtt catgggctcg ccgtgggatt atttccgacc gtctggcaac ggcgattctg
      601 agctgcgcgg gtaagtcttc tgcgtttgtt aatggtactg ccggggtggt tgttccagac
      661 aggccggtta ccacctcaga gtctgtaatt ttttacgatg ccaaaaaagc tacagacaat
      721 cagctgaaac cttatggctg ggacggtatg tatggcagac gcacactggt tgatgacagc
      781 ggcaataaag ctctgcgaat tgagaaaaat aacagcgcga aatcctggtc aatgtactgt
      841 gatattgctg cagacaaggc aaaactttta ctggaaaaag gcggggaaat tgctgtccgg
      901 tttaaaatcc ccgaaaacgt caatcttgag acaaccagaa acaagtatgc ctttggtttg
      961 tactggcgaa tagcggaatg gccgggtgag ggtggtgaag gccatctgag ttctttcttt
     1021 gtccagacag ataaagccag tattaatatt gcataccatc atacagttaa tcaacaaaaa
     1081 gaacttggca cgtttggcgc attcgaccat gactggcata cgcttgcatt taaatttaag
     1141 ggcagtaaca gcattaatgt tactccggtg cttgatggtg tggatggaca ggcgtttgac
     1201 ctggtgaaat gggccaatac tgctaatgga ctcaacaggt ttgtcattac ggatattaca
     1261 ggtagtgcag aaacctaccc tgtacttatt gatacggtgg aagttaaagc aaacaaagct
     1321 ggagcagccg cataattgct aaaaaaagcc gccagcggca ggaatggaag ctggcggagg
     1381 taatcccaat ggagaatgta aagaaaagat gctttcgtac attggttttt aaatgaaaac
     1441 aattctcatt gtcaaccata acggtaagaa attatgacat ttattcatca ggtgatgctg
     1501 tacttctgta cggcggtctg tgtgctgtat cttctttcgg gtgggtacag ggctgtgcgc
     1561 gatttctggt gcaggcagat tgataaaagg gccgctgaga aaatcagcgc cagtcagtca
     1621 gccggaagca aacccgaaga acccgttact ccttaacaac ccctttcagc gagaaaatcc
     1681 catgtcagaa atcacatccc tggtcactgc agaggcagtg aaggaagtcc ggagcgcact
     1741 gaaacagaaa cttcgccaga atcttgagtc gcgtcttgat gcagaagtgg atgccattct
     1801 ggatgagctg ctgggcgtag cagcggttcc tgagccggaa ggtatcgcgg gtgacgggag
     1861 tgcttcagat ggcggtgaac ctacacctga cagcgacatg atgatgtaag catgcgcaag
     1921 ggaccatcgg tgtgtgccgg tggtctttat attgttgtga gcttccggat tgcgggagac
     1981 ggggtatgta ccagatggaa aaaatcacaa caggtgtgtc atacaccacg tcagcggtgg
     2041 gaacgggcta ctggttcctg cagttgctgg acagggtttc cccgtctcag tgggcggcaa
     2101 taggcgtgct ggggagtctg ttgtttgggc tgctgacata tctgactaac ctgtatttca
     2161 aaatcagaga ggaccgtcgt aaggcggcgc ggggagagta aagcgatgaa gaaaaaatac
     2221 gaactggttg ttaaagggat aaataattac ccgaataaga ttactgttac tgtggcactg
     2281 gaaattggtg ggtatccgtc actgttgttg ccagatgtgg cgattagtct tgaccgtact
     2341 gaagatgcca cgctggagtt ttacgaagct gaggcgaaaa agcaggcgaa gcagtttttc
     2401 atggatgttg ctgccgggtt atgtgaaggg gatggtccgt tgccggaaaa gcgccccgta
     2461 attttagagg cgcaggatgt gttgataacc tacagaggaa aactaccggg aataattacg
     2521 ggttctctga agactccacc gctggcctga agacttaaca tatccaggga tttgaaatcg
     2581 ataaaccctg ataaatatcc atgaacacca aaatcaaata cggcctgtcg gctgccgttc
     2641 tggcgctgat tgccgcaggt gcgcctgcgc ctgaaatcct cgaccagttt ctggatgaaa
     2701 aggaaggtaa ccacaccacg gcataccgtg atggcgcggg tatctggacc atctgccgcg
     2761 gtgccatcct ggtggatagt aaacctgtcg tcccgggcat gaagttgtcg aaggaaaaat
     2821 gcgaccaggt caacgccatt gagcgtgata aggcgctggc atgggtggag cgcaatatta
     2881 aagtgccgct gaccgaaccc cagaaagcgg gtatcgcgtc attttgtccc tataacattg
     2941 gccccggtaa gtgtttcccg tcgacgtttt acagacggat taatgctggt gaccgcaggg
     3001 gagcatgcga agcgattcgc tggtggatta aggacggtgg cagagactgc cgtatccgct
     3061 caaataattg ctacggtcag gtatcccggc gagaccagga aagtgcgctg gcgtgctggg
     3121 acatcgacag ataagcagaa tattttgctg aaaaataagg catgagcacg cggacggata
     3181 acacgaaatc ctgcgaactg gcgaaacgta agtgaataaa agtaaaaacc ccgtttgttg
     3241 gcaccaagcg gggttttgtg tttctgacct tgagtaaggc aagggagaac atggcgaagt
     3301 ataaacgaat tctgttgagg ttgaccatga aaaacggcct tgaactgaaa gcgcctgtaa
     3361 ctgatgacat cagcagagca ctggcttttg ccattaagtg gatggcggtc ggtgttgctg
     3421 tgtccccgat gctgtatggg ctggcaaaac tggtcattgc gttgaaatcg tgaagggagg
     3481 attaagcatg tcagacaaac tcataacgct ggcgaagatc ctctgtgtaa ttgtcggcat
     3541 ttcattttca ctaatgctgg ttgctctttt tctttccatg gcctggatga tgttgtcttc
     3601 gtcggggctg ctggggtgaa cataaaccga atgctttccg cgtttaccgt tattctgctg
     3661 gtggtctgtg gtgcgctgtg gctggcaaca gaccattacc gtgataacgc catcacctac
     3721 aaagcgcagc gcgataaaaa agccagagag ctggagctgg caaacgcaac cattactgac
     3781 atgcagcagc gccagcgtga tgttgctgcg cttgatgcca gatactcaag ggaattagcc
     3841 gatgcgagag ctgaaaatga aactctgcgt gctgatgttg ccgctggtcg taagcgcctg
     3901 cggatcaacg ccacctgctc cggtaccgtg cgtgaagcca ccggcacctc cggaatggat
     3961 aatgcaaccg gcccccgact ggcagacacc gctgaacggg attatttcac cctcagagag
     4021 cggttgatga caatgcagaa gcaactggaa ggggcgcagg aatatatccg cactcagtgt
     4081 attaactagt atttttgtta tccggagaat gcatgaagaa attactggta accgtaaagc
     4141 cttttcaggg aacaattccg ttccgtattt tgcagcgtgg tcgtgttctt gttgaaggtt
     4201 cgttcagtgg taaatgtacg caattacact cccggacctt tcaggtgaat gccacgaatg
     4261 aagagctaac cgttgagtgt acgatgaatg ccgctaaatg ccgcatggta tccgctgcat
     4321 tacagccagt gtgttgagcg accttattaa ccatgcgcgg tattgtcgcc gtatccccgc
     4381 attaacagag accgcagccc gaccgggaga ctcctctgcg cgagtgtgcg gggataatca
     4441 aaaacgatac acaccggggt ttaccgcgtt aacggagcgc ggcgttgtcc cctcatggtc
     4501 gctggtccgg tgcgatggtg gaagaaaccg gacgatgtgt tacctcgcaa gctctgttat
     4561 gtcatgtgtc tgatttgtga tttaagtcgg ataattgtcg ttgccattaa gcagaggatt
     4621 gatgaccgac agggtggcat tgttagaata agacttattc ttatctgtgc cgggaatgaa
     4681 aatgaaaaga aa
//
LOCUS       DADMHC010000243         4665 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.246, whole genome shotgun sequence.
ACCESSION   DADMHC010000243 DADMHC010000000
VERSION     DADMHC010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4665)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4665)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4665
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.246"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..753)
                     /locus_tag="JNZ57_003726"
     CDS             complement(<1..753)
                     /locus_tag="JNZ57_003726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416329.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic diguanylate phosphodiesterase"
                     /protein_id="HAY8829776.1"
                     /translation="MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQ
                     RVVQFANHAVEELDKVLLPLQAGSEVLLPLIALPCSVAHLPLRKQAAKLQTVRSIGLV
                     QDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSN
                     AGVMEMINIDLLTAMLLEPQLQQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVS
                     SQRFPFTINVNGPGATALAWHYLPTQLPLAVLL"
     gene            complement(884..2248)
                     /gene="sdaA"
                     /locus_tag="JNZ57_003727"
     CDS             complement(884..2248)
                     /gene="sdaA"
                     /locus_tag="JNZ57_003727"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HAY8829777.1"
                     /translation="MISLFDMFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLDSVTR
                     VAVDVYGSLSLTGKGHHTDIAIIMGLAGNEPATVDIDSIPGFIRDVEEHERLLLAQGR
                     HEVDFPRDNGMRFHNGNLPLHENGMQIHAYNGDEVVYSKTYYSIGGGFIVDEEHFGQD
                     AANEVSVPYPFKSATELLAYCNETGYSLSGLAMQNELALHSKKEIDEYFAHVWQTMQA
                     CIDRGMNTEGVLPGPLRVPRRASALRRMLVSSDKLSNDPMNVIDWVNMFALAVNEENA
                     AGGRVVTAPTNGACGIVPAVLAYYDHFIESVSPDIYTRYFMAAGAIGALYKMNASISG
                     AEVGCQGEVGVACSMAAAGLAELLGGSPEQVCVAAEIGMEHNLGLTCDPVAGQVQVPC
                     IERNAIASVKAINAARMALRRTSAPRVSLDKVIETMYETGKDMNAKYRETSRGGLAIK
                     VQCD"
     gene            complement(2432..3010)
                     /locus_tag="JNZ57_003728"
     CDS             complement(2432..3010)
                     /locus_tag="JNZ57_003728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HAY8829778.1"
                     /translation="MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQP
                     GLLLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLP
                     PVDSVTGYQVTPVVGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDS
                     HRVWLSWYEQYFVWGMTAGIIRELALQIGVKP"
     gene            complement(3014..4375)
                     /gene="pabB"
                     /locus_tag="JNZ57_003729"
     CDS             complement(3014..4375)
                     /gene="pabB"
                     /locus_tag="JNZ57_003729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component 1"
                     /protein_id="HAY8829779.1"
                     /translation="MKTLSPAVITLPWRQDAAEFYFSRLSHLPWAMLLHSGYADHPYS
                     RFDIVVAEPICTLTTFGKETVVSESEKRTTTTDDPLQVLQQVLDRADIRPTHNEDLPF
                     QGGALGLFGYDLGRRFESLPEIAEQDIVLPDMAVGIYDWALIVDHQRHTVSLLSHNDV
                     NARRAWLESQQFSPQEDFTLTSDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRF
                     HATYSGDEWQAFLQLNQANRAPFSAFLRLEQGAILSLSPERFILCDNSEIQTRPIKGT
                     LPRLPDPQEDSKQAEKLANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPF
                     PAVHHLVSTITARLPEQLHASDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWCG
                     SIGYLSFCGNMDTSITIRTLTAINGQIYCSAGGGIVADSQEEAEYQETFDKVTKILRQ
                     LEK"
     gene            4449..4628
                     /locus_tag="JNZ57_003730"
     CDS             4449..4628
                     /locus_tag="JNZ57_003730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoaH family protein"
                     /protein_id="HAY8829780.1"
                     /translation="MFAGLPSLTHEQQQKAVERIQELMAQGMSSGQAIALVAEELRAN
                     HSGERIVARFEDEDE"
BASE COUNT         1170 a         1197 c         1214 g         1084 t
ORIGIN      
        1 tagcagcacc gccagcggta attgtgttgg aagatagtgc catgccagcg ccgtagcccc
       61 cggaccatta acgttaatgg taaaaggaaa gcgttgcgaa gaaacctgat agttttcatt
      121 gtcttcaggt tgcggaaggg aatctaccag cccattacca tagagcaaat gccgtttgtc
      181 caccgtcagg ctggcgctac tgatttgctg cagttgtggc tcaaggagca ttgccgtcag
      241 taagtcgatg ttaatcatct ccatgacccc agcattgcta ctgcccgctg caggcgtcca
      301 ttgaatcaaa accggactgc ctttaatcag ggcacggtcg atcgtcaggc gtaaaagtgg
      361 ttgcggtgca ggaagttcag ccagaatgtc cacgacgggc acattgcgat aaccaaaaat
      421 gctggagcaa tagagtgtgc cgtcttgcac caggccaatg gatcgcacag tttggagttt
      481 tgccgcctgt ttacgtaatg gcaaatgggc gacagagcag ggcagggcaa tcagcggaag
      541 caagacttcg ctacctgcct gtaggggaag cagtacttta tctaattcct ctacagcgtg
      601 attggcgaat tgtactaccc gttgttgatt taagttacgc tgtgaaataa atcgcacgct
      661 cagggtcgaa gcgagcgtaa cgagtgcgca aatcgtacaa acaatcattc gattacgtcg
      721 ataggtttta atgatccgtt gtgctttttg catgcgggcc accctgtaag cgtatggcga
      781 caaacgcctg acgcaacagt agatgtgtag tggggaatat tacagcagac gagaaagcgg
      841 gtataaattc gcccatccgt tgcagatggg cgagtaagaa gtattagtca cactggactt
      901 tgattgccag accaccgcgt gaggtttcgc ggtatttggc gttcatgtcc ttaccggttt
      961 cgtacatcgt ttcgatgacc ttatccagcg agacgcgcgg tgcactggtg cggcgcagag
     1021 ccatccgtgc ggcgttaatc gccttcacag aggcaatggc attacgctca atgcacggca
     1081 cctgaacctg ccctgcaacc gggtcgcagg ttaaaccaag gttgtgttcc atgccaattt
     1141 ccgccgccac gcaaacctgt tccgggctac cgcccagcag ttctgcaaga cccgcagcag
     1201 ccattgaaca ggcaacaccc acttcgccct ggcaaccaac ttccgcaccg gaaatagagg
     1261 cgttcatttt atacaatgca ccaatcgcgc ccgctgccat aaagtaacgg gtatagatgt
     1321 ccgggctgac cgattcaata aagtggtcat agtaagccag cactgccgga acgataccgc
     1381 aggcaccgtt ggttggcgca gttaccacac gaccaccggc ggcgttttct tcgttaactg
     1441 ccagcgcaaa catgtttacc cagtcaatga cattcatcgg atcgttagac agtttatcgc
     1501 tggaaaccag catccggcgc agggcagacg cacgacgtgg cacgcgcagc gggcctggca
     1561 gtacaccttc ggtgttcatc ccgcgatcga tacatgcctg catggtttgc cagacatgcg
     1621 cgaaatactc gtcgatctct ttcttgctgt gcagcgccag ttcgttctgc atagcgagac
     1681 ctgacagcga atagccggtt tcattacagt acgcgagcag ttcggtggca gatttgaacg
     1741 gatacggcac gcttacttcg ttggcagcat cctgaccaaa gtgttcttca tcgacgataa
     1801 aaccgccgcc gatggaataa taagttttgc tgtagacgac ttcatcgccg ttataggcgt
     1861 ggatttgcat accgttttca tgcagcggca ggttgccgtt atgaaaacgc atcccgttgt
     1921 cgcgcgggaa atccacttca tgccgtccct gtgccagcag cagacgttcg tgctcttcta
     1981 cgtcgcgaat aaaaccggga atactgtcga tatccacggt ggcaggttcg ttacctgcaa
     2041 gacccataat aatggcgata tcggtgtggt ggcctttacc cgtcagcgac agtgaaccat
     2101 aaacgtccac ggcaacgcga gtaacgctat ccagtaagcc tttttcgacc agatcatcga
     2161 cgaactgttt acccgccttc ataggcccta cggtatggga agatgaggga ccaatcccca
     2221 ccttaaacat gtcgaataga ctaatcacga taatactcct gacaaggtga ctggacttcc
     2281 agtaacgaac taataacagc gcatagtgta agagggaacg cggcgactgg cttaactatt
     2341 cacatgaatt aaactaatca aaaaccgcga tttaactaat attgcgatga ttgtctcaag
     2401 tagtgttttg tagatgtaaa gataagtata gtcagggttt cacaccaatt tgcagcgcca
     2461 gctcacgaat tatgcctgcg gtcattcccc atacaaaata ctgttcgtac caggacagcc
     2521 atacccgatg tgaatcgcca cggcggtaga tatctaaagg gtgataacga cccagatgta
     2581 atgcctgggc gagcggcatt tcaaacaccg ccgagacttc atcttcactg gcgcgatacg
     2641 gcagatcggg tgggataatg ccgaccactg gggttacctg atagccagtt acgctatcga
     2701 cgggcggcag cacgccgata acttcaacgg cggaaggcgg tatagcgacc tcttcttcag
     2761 cttcgcgcag cgcggcggcg ataactgatg cgtccgtgtc atcgactgca cctccaggga
     2821 atgccacttg tccagcgtgt ttacgcagat gaattgaacg ctgagtcagc aacaaccccg
     2881 gttgcggtcg acggacgatg gggattaaca cggcagcctg acgatgattt agggtttccc
     2941 ggttaatttg cgggcgcaaa agttgaaagc gagataaaaa atcatcaagc gtcaggctac
     3001 ggtattccac gtcttacttc tccagttggc gtaatatctt agtaacttta tcaaaagttt
     3061 cctgatattc cgcttcttcc tggctatcgg cgacaattcc accgcccgca gagcagtata
     3121 tttgtccgtt aatggcagtc agcgtgcgga tagtaatgct ggtatccatg ttgccgcaaa
     3181 agctcaaata gccaatgctg ccgcaccagg cattacgtcg ctgcggttcc agttcgtcga
     3241 taatttccat agcccgtact ttcggagccc cggttattga gccaccagga aaagctgcgc
     3301 gcagcagatc gctggcgtgt aactgttctg gtagtcgcgc cgttatagtg ctgaccagat
     3361 gatgcacggc agggaagggt tccaccacga agagctctgg tacttttacc gaaccggcta
     3421 cggcaacacg accgatatca ttacgcatta aatcgacaat catcagattt tcggcacgat
     3481 ctttcgctga gttcgccagt ttttctgctt gtttgctatc ttcctgagga tcgggcaggc
     3541 gtggtagcgt gcctttaatc gggcgggtct ggatttcact attatcacaa agaataaacc
     3601 gctctggcga aaggcttaaa attgcaccct gttcaagacg taaaaaagcg ctaaatggcg
     3661 cgcggttggc ctgattaagc tgaaggaatg cctgccattc atcgccagaa taggtcgcat
     3721 gaaaacgctg ggcgagattc acctgatagc aatcaccgct gtgcagatat tcctgtacct
     3781 ggcgaaattt ttcgccgtac tgctcgcggg tcatattgga ttgccagtcg gaagtgagcg
     3841 tgaaatcttc ctgcggcgag aattgctggc tttccagcca ggcccgacgg gcattgacat
     3901 cattatgact cagcaaagaa actgtatgac gctggtggtc gacaatgagc gcccaatcgt
     3961 agatacccac tgccatatcc ggcagaacga tatcttgttc cgcaatttct ggcagtgact
     4021 caaaacggcg gcccagatcg tagccaaaca accccagtgc gccgccctga aatggcaaat
     4081 cttcgttatg cgttgggcga atgtctgcgc gatccagcac ctgctggagc acctgtagcg
     4141 ggtcatcagt ggtcgttgtg cgtttttcgc tttcactaac aacggtttct ttaccgaaag
     4201 tggttaaagt gcaaatcggc tcggcgacca caatatcaaa gcggctatac ggatgatcgg
     4261 catagccgga gtgtaaaagc atcgcccacg gcaggtggct taagcgggag aaataaaatt
     4321 cagcggcgtc ctgacgccag ggtaaagtaa tcacagcggg agataacgtc ttcatcagtc
     4381 ctgactctac tggctatgtg ccgggtagca tgaaataatt agcgccaaca atttagcagg
     4441 agttaacaat gtttgcaggt ttaccttcac tcacccatga acagcagcaa aaagctgtcg
     4501 agcggatcca ggaactgatg gcacaaggga tgagcagcgg ccaggcaatc gcgctggtgg
     4561 cagaagagct gcgtgccaac cactccggcg agcgaatcgt ggcgcgtttt gaggatgaag
     4621 acgagtaaca cactaatccg tatcgatttc gttatagaag ccgat
//
LOCUS       DADMHC010000244         4624 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.247, whole genome shotgun sequence.
ACCESSION   DADMHC010000244 DADMHC010000000
VERSION     DADMHC010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4624)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4624)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4624
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.247"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            109..483
                     /locus_tag="JNZ57_003731"
     CDS             109..483
                     /locus_tag="JNZ57_003731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000651574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8829781.1"
                     /translation="MKDIDTETRNNTVADNVTAVEDMAVERGVKLTRPIERGGEKITY
                     VEITGAIEQAGSLRGLSLSDVLNLKADTMFTLLPRVTSPRLDEVMIKKMSSRDFIQLC
                     AVAVNFMSEPDSGAKSVQETAA"
     gene            492..647
                     /locus_tag="JNZ57_003732"
     CDS             492..647
                     /locus_tag="JNZ57_003732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000333494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HAY8829782.1"
                     /translation="MCFEHIEDLVADIAAIFNWSPAEIFMMTPCEVVSWRERAALRSG
                     NADNEDS"
     gene            634..3441
                     /locus_tag="JNZ57_003733"
     CDS             634..3441
                     /locus_tag="JNZ57_003733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000853438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HAY8829783.1"
                     /translation="MKTLDIRVAFSAVDRLTRPAENARRLMGQFGDSIQRTQGAIKNL
                     ERQARSFERARDAVSKADAGIVKARRQLNALNQLQRTGTVLSEKQQKLMQQLSTRLER
                     LNESRTREIQKMRELGGELKRHGISLTGSDNTIQQAIRRTEQYNNQLERERQALARVT
                     RARERYSRAQETAGKLKTGGALAIGAAAAGGYAAGRFLQPAIGFGKEMFRVQALTRID
                     QNSPQFKALREQALKLGSETQFTAGDAASGQAFLAMAGFTPQAIQAALPGVLSMATAG
                     GMDLGETADIGSNILTQFGLSADQMDRVGDTLTAAFTRTNTDLRALGETMKYAGPVAG
                     KLGISLEQAAAMAGVLANMGIRGSDAGTAMRASLARLASPPKAAAEALKELGVSVSDA
                     GGKMRPMEDVLADLYKATRKYGEVDRVSFFKDIAGEEAFTSFMALVDAAGDGSLPKLR
                     KELEGARGEAERTAKVMANNLDGDLKSLSSAWEGLRIRIADLIDGPLRSVTQWLTRVV
                     SKVTALAQAHPALTRQLLIAGGALLAMTATVGSLSLAIGVLAGPLAKLRLGFSLLTGS
                     MNAVRVLPALWGMVTGSVSLLGGAIGALFSPVGLIVAALAGAAVLIWKYWDPIRAFFA
                     GVFSGIMERLTPLRETFERFGPVFDAIGSGISQVFNWFKSLLSPMESSKETLDKCTSA
                     GEIFGNVLGGALQLVLTPAKMLLDTLAWILEKLGVLPDEAERARKKIEDAQRAAILQD
                     KVALLQGDLAKINPPKPVENGNGTGGDNPKDNKPLTDSNTGTLRRLSKIADNTGKLVE
                     ETKKRIGPGDIVFKNLPRALAVRGEWQERKIAQVSKPAPAINITPVVPAPLPPALVPV
                     VAASSRPVAEAIRSPVASVPVTSRNREPVASGFGGEIHVHLHNVVTQNPRELAKLVGE
                     MVRAEMERRARAGRGCFYDKD"
     gene            3454..3942
                     /locus_tag="JNZ57_003734"
     CDS             3454..3942
                     /locus_tag="JNZ57_003734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001761054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8829784.1"
                     /translation="MMMIYGMFVFELRTLPHQQLQQNKSWRHVKNERVNRSASWQYIG
                     AGDDRIVLSGVLYPEITGGEVSLSLLTTQAYTGRPWPLIDGVGQIYGMYVLTETNTTR
                     SEFDRYGKAKKIEFSLTLERCDEDLRERLQSSSFSDMLSGFKDKVTSSLNSAASSVKG
                     LF"
     gene            complement(3971..4570)
                     /locus_tag="JNZ57_003735"
     CDS             complement(3971..4570)
                     /locus_tag="JNZ57_003735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000905087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HAY8829785.1"
                     /translation="MLIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTKTDRPG
                     LKRALKRLQKGDTLVVWKLDRLGRSMKHLISLVGELRERGINFRSLTDSIDTSSPMGR
                     FFFHVMGALAEMERELIVERTLAGLAAARARGRTGGRRPKLTKEQHEQIARLIKNGHD
                     RKQLAIIYGIGTSTIYRYHPVGDIQTEETTGQTQENENR"
BASE COUNT         1045 a         1163 c         1350 g         1066 t
ORIGIN      
        1 acggcaagga cattgtgccc gatcgcatcc gttccgcgct tgggcttggc tgataagtaa
       61 tatgctggcg gcgcagtgcg tcgcctctga ctgaaaagga gacaacagat gaaagacatc
      121 gatactgaaa cccggaataa caccgtggcg gataatgtga cggcagttga ggatatggct
      181 gtcgaacgtg gcgtaaaact gacccgacca attgagcgtg gtggcgaaaa aatcacgtat
      241 gtggagatca ccggggctat tgagcaggct ggatccctgc gtggtctgtc gctgtctgat
      301 gtgctgaatc tgaaagcgga taccatgttc acgctgttgc ctcgcgtgac ctcgccacga
      361 ctggatgaag tgatgattaa aaaaatgtcg tcacgcgatt ttattcagtt gtgcgctgtg
      421 gctgtaaatt ttatgagcga gccagactct ggcgcgaaga gcgtgcagga gacggcagcg
      481 taatcaccct ggtgtgcttt gagcacatcg aagatctggt ggcggatatt gccgccattt
      541 ttaactggtc gcccgccgaa atcttcatga tgacgccctg cgaagtggtt agctggcgtg
      601 agcgagcggc acttcgtagc gggaatgcag acaatgaaga ctcttgatat ccgggtcgct
      661 ttcagcgccg ttgacaggct gacccggcct gccgaaaacg cccgccgcct gatggggcag
      721 tttggtgact ccatccagcg aacgcagggg gcgatcaaaa atctcgagcg tcaggcgcga
      781 tcatttgagc gcgcccgtga cgctgtcagt aaagcggatg cgggcatcgt gaaagcacga
      841 cgccagctta acgcccttaa tcagttacaa cgcacgggta cagtgctcag cgaaaaacaa
      901 caaaagctga tgcagcagtt aagcacccgg cttgaacgcc tgaatgaatc gcgcacacgg
      961 gaaattcaga aaatgcggga gcttggcgga gagctgaaac gccacggcat ttccctgaca
     1021 ggcagcgata acaccatcca gcaggccatc agacgcaccg aacagtacaa caaccagctt
     1081 gaacgcgaac ggcaggcgct tgcgcgtgta acacgggcgc gtgagcggta ttcgcgcgcg
     1141 caggaaacag cgggaaaact gaaaacaggt ggtgcgctgg caattggtgc ggcagcggcg
     1201 ggcggctatg ctgccgggcg ttttttgcag cctgcgatcg ggttcggcaa agagatgttc
     1261 cgcgttcagg cactgacgcg aatcgaccag aacagcccgc agtttaaggc gctgcgtgag
     1321 caggcgttaa aacttggctc tgaaacgcag ttcaccgcag gcgatgccgc cagtggacag
     1381 gcatttcttg caatggctgg ctttacacca caggccattc aggctgcgct ccctggcgta
     1441 ctgagcatgg caacggctgg cggtatggac ctcggtgaga cggcggatat tggctcaaat
     1501 attctgacgc agttcggtct ttctgctgac cagatggacc gggtcggcga cacactcacc
     1561 gcagcgttta cccgtaccaa cactgacctt cgcgcactgg gtgaaaccat gaaatatgca
     1621 ggtccggtgg cgggtaagct gggaatatct ctggagcagg ccgcagcgat ggcgggcgtg
     1681 ctggcgaata tgggtatcag ggggagtgat gctggtacgg caatgcgtgc cagcctggct
     1741 cgtctggcat caccgccaaa ggcggcagca gaggcgctga aagagcttgg cgtgtctgtc
     1801 tcggatgccg ggggcaaaat gcgcccgatg gaggatgtgc tggctgacct ttataaagct
     1861 acccgcaaat acggggaagt tgaccgggta tcgttcttta aggacattgc cggagaagag
     1921 gctttcacat catttatggc cctcgttgat gcggcaggtg acggctcctt acccaaactg
     1981 agaaaagaac ttgaaggcgc gcgcggtgag gctgaacgca cggcaaaggt tatggccaac
     2041 aaccttgacg gcgatctgaa atcactcagc agtgcatggg aagggttgcg catccgcatt
     2101 gcagatctga ttgacggtcc gctgcgttct gtcacgcagt ggctcacgcg tgtggtatca
     2161 aaggtgacgg cgctggcgca ggcccatccc gcactgacgc gccagctact gattgcaggc
     2221 ggtgcattgc tggcaatgac tgcaacggtt ggctcgttgt cgctggctat tggtgtgctt
     2281 gctggcccgc tggcaaaact gcgtcttggt ttttccctcc tgaccggatc aatgaatgct
     2341 gtcagggttc tgccagcact atggggaatg gtgacgggtt ccgtttcttt actgggaggc
     2401 gctatcgggg cgttgttcag tccggttggt cttatcgtgg ctgcgcttgc cggagctgcc
     2461 gttcttatct ggaaatactg ggatcccatc agggcatttt ttgccggggt gttcagcggg
     2521 attatggaaa ggctgacccc gttgcgcgaa acatttgaac ggtttggtcc tgtttttgac
     2581 gcaatcggga gtgggatcag ccaggtgttt aactggttta aatcgctgct gtcaccgatg
     2641 gagtccagca aggaaactct ggataaatgt accagtgctg gcgagatatt cggtaacgtt
     2701 cttggcggtg cgttacaact tgttctgaca cctgcaaaaa tgttgctgga tacgctggcg
     2761 tggatacttg aaaagcttgg tgtgcttccg gatgaagcgg aaagggcgcg caagaaaatc
     2821 gaagacgcac agcgtgcggc cattcttcag gacaaggttg ccttgcttca gggggacctg
     2881 gcgaaaatca atccgccgaa gcctgtggaa aatggcaatg gcaccggagg tgataacccc
     2941 aaagacaata aaccgctcac agacagcaat accggtacgc tgcgcagact cagcaaaatt
     3001 gctgataaca caggtaagct ggttgaggag acgaaaaaac gcattggccc cggcgatatt
     3061 gtctttaaaa acctgccccg agcacttgct gttcgtgggg agtggcagga gcggaagatt
     3121 gcgcaggtca gtaagcctgc ccccgcaatt aatatcacac ccgtggttcc ggctccgctg
     3181 cctccggcgc tggtccctgt tgttgcggcc agctcccgcc cggtggcgga ggctatacga
     3241 tctccagtgg catcagttcc tgtaacttcc cgtaaccggg agcctgttgc ctccggattt
     3301 ggtggtgaaa ttcatgttca tctgcataac gttgttacgc agaatccccg cgaactggcg
     3361 aaactggtcg gtgaaatggt cagggcagaa atggaacggc gcgcccgtgc cgggcgtggc
     3421 tgtttttacg ataaagattg aggagtcatg gccatgatga tgatctacgg catgtttgtt
     3481 tttgagctgc gcacgctgcc gcatcagcag ttacagcaaa acaaaagctg gcggcatgtg
     3541 aaaaatgaac gcgttaaccg ttcagcaagc tggcagtata tcggtgcagg tgatgatcgc
     3601 atcgttcttt ctggtgtgct ttatcctgaa attacaggtg gcgaagtgtc gctgtcgctg
     3661 ctgaccacgc aggcgtatac aggacgaccc tggcctttga ttgatggcgt cgggcagatt
     3721 tacggcatgt atgtcctgac tgaaacgaat acgacccgct ccgagtttga tcgctacggt
     3781 aaggcgaaaa agatagaatt ttcactgact cttgaacgct gtgatgagga tttgcgggag
     3841 cgcctgcaat cctcatcgtt cagtgatatg ctgtccggct tcaaagataa ggtgacatca
     3901 tctcttaaca gcgcggccag ttcagttaaa gggctgttct gatttaacac aaaaaccgct
     3961 aatggtcaga ttagcggttt tcattttcct gagtctgccc ggttgtttct tcagtctgta
     4021 tatcgcctac agggtgataa cgataaatcg tcgatgtgcc aatgccgtaa attattgcca
     4081 gttgttttct gtcgtgcccg tttttgatta gccttgctat ttgctcatgc tgttcttttg
     4141 tcagcttcgg tcgacgtccg cctgtgcgcc cccttgcgcg cgctgccgcc agcccggcca
     4201 gtgtacgttc aacaattaat tcacgttcca tttcagccag ggcacccatc acgtggaaga
     4261 aaaaacgccc cattggagaa gatgtgtcta tgctgtcggt cagactgcga aaattaatcc
     4321 ctcgctcccg tagttccccg acgagagaaa tcagatgttt catgcttcgc ccgaggcgat
     4381 ccagtttcca gacaaccagc gtgtcacctt tttgaaggcg ctttaaagcg cgttttaatc
     4441 ccggtcggtc tgtctttgtc ccgcttaatt tatcttcaaa tatttgttca catcctgcac
     4501 aaacaagagc gtttcgttgc aggtctgtat tctggtcatt tgttgatacc cttacatagc
     4561 caatcagcac actgaatctc ccgtccaaaa gcgcaaatca tgccatgcag gccagaaacg
     4621 gcca
//
LOCUS       DADMHC010000245         4601 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.248, whole genome shotgun sequence.
ACCESSION   DADMHC010000245 DADMHC010000000
VERSION     DADMHC010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4601)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4601)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4601
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.248"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            141..4308
                     /locus_tag="JNZ57_003736"
                     /pseudo
     CDS             141..4308
                     /locus_tag="JNZ57_003736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001578540.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
     gene            4311..>4601
                     /locus_tag="JNZ57_003737"
     CDS             4311..>4601
                     /locus_tag="JNZ57_003737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001268525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HAY8829786.1"
                     /translation="MRYFLFIFITIPLISGGHMSNDSEKIISTYSLNFLSPDDVRKEE
                     LKASQGDSDAAFKLYKYYLFCEPKSYRKQHEWLIISANNGNAIAQYNLSRELE"
BASE COUNT         1204 a         1174 c         1353 g          870 t
ORIGIN      
        1 cagtaagttg gagtcattac cgatatcagt caaaaaaata atacaaaaag agagtatttc
       61 gtttcataca gtaacgttat ttatcatttt gtccggtgcc gccagcatca ggccagatga
      121 accataaaag gatatcagcg atgagcggaa aaccagcggc acgtcagggc gatgccacaa
      181 tgaaaggtgg cccgatagtc caggggtcgg caggcgtgag aattggtgcg ccaaccggcg
      241 tggcctgctc agtgtgcccc ggcggattca cttccggcaa cccggtgaat ccgctgctcg
      301 gtgcaaaagt acagcccggc gaaaccgatt tcgcgctgcc cggcccgtta ccgttcgtgc
      361 tctcccgcac ctacagcagc taccggacga aaacccctgc gcccgtcggt atcttcggtc
      421 ctggctggaa agcacccttt gatatccgct tacagatacg cgataacgaa ctgatactca
      481 atgataacgg tggcagaagc attcattttg agcacctgtt tcccggtgag gatggtttca
      541 gccgcagcga attattctgg ctggtacgcg gcggcgtggc gaaactgaat gaaagtcacc
      601 gtcttgcccc actctggcag gctctgccgg aagaactccg cctgagtccg catatttatc
      661 tggcgacgaa cagtccgcag gggccgtggt gggtactcgg ctggagtgag cgggtgccgg
      721 gggggggatg aggtgctgcc tgccccattg ccgccgtacc gggtgctgac cggcctggtg
      781 gaccgcttcg ggcgcacgca aaccttccac cgtgaggccg caggcgaatt taccggagaa
      841 atcaccggcg tgaccgatgg ggctggccgt cagttctgcc tggtgctgac cacgcaggcg
      901 caacgggcag aaaacgcccg gcagcaggcc atcgccgcag gaacgaaagg atcggatatc
      961 ccggattcac tgccggacta tacggagtat ggccgggata acggtatccg cctgtcaggg
     1021 gtgtggctga cgcacgaccc ggaatacccg gagaatctgc ccgccgcccc cctggtacgc
     1081 tacgactgga cggcacgcgg tgagctggcg gcggtgtatg accgcagcgg tactcagatg
     1141 cgccacttta cttacgatga taaataccgg ggccggatgg tggcgcaccg ttacgcaggc
     1201 aggccggaga tgcgttaccg ctacgacgac ataggtcgcg tgacggagca gtttaatccg
     1261 gcaggcttaa gctacgccta tcagtatgag aaaaaccgta tcaccatcac cgacagcctg
     1321 aaccggcggg aggtgctgca cacggaaggt gaagccgggc tgaaacgtgt ggtgaaaaag
     1381 gaattcgcgg atggcagcat cacccgaagt aaatttgact atatggggcg actccagtca
     1441 cagacggatg cagcaggccg gacaacagaa tacagtccga atgtggtgac gggactcgtc
     1501 acgtgcatca ccacgccgga cggcaggaaa tcggaatttt actataacaa tcaaaaccag
     1561 ttaacctcag ccaccgggcc tgacggactg gaaatacgcc ggaaatatga tgagtacggg
     1621 cgtctgacgc aggaaacagc acgcaacggc gatgtcaccc gctacagtta tgataatcca
     1681 cacagtgaat taccctctgt aacagaagat gcgacgggta gccgcaagca gatgacgtgg
     1741 agccgctacg ggcagttaca gaccttcacc gactgctcag gctatgaaac ccgttatgaa
     1801 tatgaccgct tcgggcaaat gacggcggtt caccgtgagg aaagcatcag cctttaccgc
     1861 agttacgaca accgtggcca gttaatctcg gtgaaagata cgcagggccg tgaaacgcag
     1921 tatgagtaca acgccgcagg cgacccgacc gccatcattg ccccggacgg caaccggagt
     1981 gagacacagt acgatgcgtg gggaaaggcc gtcagcaccg cacagggtgg gctgacgcgc
     2041 agcatggaat acgatgcagc gggacgtgtc atcagcctga ccaacgagaa cggcagccat
     2101 acagaattta gctgggatgt gcttgacctc ctgatacagc agcgcggctt tgacgggcgg
     2161 acgcagcgtt accgttatga cctgaccggg aaactcacgc agagcgagga tgaggggctt
     2221 atcaccctct ggcactacga tgcatcggac cgtatcacac accgcacggt gaacggcgaa
     2281 ccggcagagc agtggcggta taacgaccac ggctggctga cagaaatcag ccatctcagc
     2341 gaaggccacc gggtggcggt gcattacggt tataaccgta agggacgtct cacaggcgag
     2401 cgccagacgg tacatcaccc ggagacgggg gaactgctct ggcagcatga gacgcaacac
     2461 acttacaacg agcaggggct ggcaaaccgc tttcaggcag acagcctgcc accggtggag
     2521 tggctaacgt atggcagcgg ttacctggcg ggaatgaaac tgggcgacac gccgctggtg
     2581 gagtacacac gggatagact gcaccgggaa acggtgcgca gcttcggcaa taatgcatat
     2641 gaactgacca gcacttacac ccccgcaggc cggttacaga gtcagcacct gaacagcctg
     2701 gtgtatgacc gtgactatgg ctggaatgac aatggcgacc tggtgcgcat cagcggcccg
     2761 tggcagtcgc gggaatacgg ctacagtgcc acgggcaggc tggagagtgt gcgcaccctt
     2821 gcatcagacc tggatatccg catcccgtat gcctccgacc cggcgggaaa ccgcctgccg
     2881 gacccggagc tgcacccgga cagtacactc acggcgtggc cggataaccg aatcaccgaa
     2941 gacgcgtact acctgtaccg ctatgacagg tatggcaggc tgacggagaa gacggaccgc
     3001 atcccgacgg gtgtgatacg gacggacgac gagcggaccc accactacca ctacgacagc
     3061 cagcaccggc tggtgtttta tacgcggata cagcatgagg agccactggt cgagagccgc
     3121 tatctctacg acccgctggg ccgccggacg gggaaacggg tgtggcgttg cgagcgtgac
     3181 ctgacgggat ggatgtcgct gtcgcgtaaa ccggaggtga cgtggtacgg ctgggacagc
     3241 gaccggctga cgacggtaca gaccgatacc aagcgtatcc agacggtata ccagccgggg
     3301 agcttcacgc cgctcatccg tatcgaaaca gagaatggtg agctgcagaa agcgcagcgc
     3361 cgcagcctgg cggagaagtt gcagcaggaa ggaagcgagg acggccacgg tgtggtgttc
     3421 ccggcagaac ttgtgaggat gctggacagg ctggaggggg aaatccgggc agaccgcgtg
     3481 agcagtgaaa gccgccagtg gctggcacag tgcgggctga cggtggagcg gctggcggca
     3541 cagatagagc cggtttattt acctgagcga aaaattcatc tttatcactg tgaccaccgg
     3601 gggctgccgc tggcgctcat cagtaccgaa ggagcaacgg aatggcgtgg ggagtatgac
     3661 gagtggggga atcagcttaa tgaggagaac ccgcatcatc tgttccagcc ataccgcctg
     3721 ccggggcagc agtacgatga tgaatcgggg ctgtgctata atcgttatcg ttactacgag
     3781 ccgttacagg ggaggtatat tacacaggac ccgattgggt taaatggggg gtggaattta
     3841 tataaatatc cgctgaatcc aataaattat gcagatcctc ttggcttagc cgtagatata
     3901 aaccacttcc cagttaacga agacatacga aattatgcag agaaagtttg gaataatcct
     3961 aatatcatta caattggaac acatggtgat cctcaatcag tatatgatga aaattataat
     4021 aagatagatg tcaagacatt agctaatgag gttcgaaatc atcctaaatt taaacatgga
     4081 atgtcagtaa gactgttatc ctgtaataca ggaaaaggaa ataactctta tgcacagcaa
     4141 ttggcagatg aactaggtgt gagagtctat gctcctgacc aatatgactg gtactattca
     4201 aatggtaagg tagagccttg gggaggattc tatgatgcaa acaatcaatt gcaaatggac
     4261 acgaatcagc ctggacatga gtttacattc aagcgaagga aaccataggt atgaggtatt
     4321 ttctctttat atttataaca atccccctta tctctggagg tcatatgagt aatgatagcg
     4381 aaaagataat atcaacatat tcgctcaatt ttttatcacc agatgatgtg aggaaagaag
     4441 aacttaaggc atcacaaggt gatagtgatg ctgcatttaa attatacaaa tattaccttt
     4501 tttgcgagcc aaaatcatac agaaaacagc acgaatggtt aataatatcg gcaaataatg
     4561 gaaatgctat agctcaatat aacttatcaa gagaacttga g
//
LOCUS       DADMHC010000246         4586 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.249, whole genome shotgun sequence.
ACCESSION   DADMHC010000246 DADMHC010000000
VERSION     DADMHC010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4586)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4586)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4586
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.249"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(28..129)
                     /locus_tag="JNZ57_003738"
                     /pseudo
     CDS             complement(28..129)
                     /locus_tag="JNZ57_003738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311173.2"
                     /note="with ArnE is responsible for the transport of
                     4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from the
                     cytoplasm to the periplasm; incomplete; partial in the
                     middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4-amino-4-deoxy-L-arabinose-phospho-UDP
                     flippase"
     gene            complement(129..464)
                     /gene="arnE"
                     /locus_tag="JNZ57_003739"
     CDS             complement(129..464)
                     /gene="arnE"
                     /locus_tag="JNZ57_003739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol
                     flippase subunit ArnE"
                     /protein_id="HAY8829787.1"
                     /translation="MIWLTLVFASLLSVAGQLCQKQATCFVAINKRRKHIVLWLGLAL
                     ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIG
                     GIVILGSTV"
     gene            complement(461..2113)
                     /gene="arnT"
                     /locus_tag="JNZ57_003740"
     CDS             complement(461..2113)
                     /gene="arnT"
                     /locus_tag="JNZ57_003740"
                     /EC_number="2.4.2.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A)
                     4-amino-4-deoxy-L-arabinosyltransferase"
                     /protein_id="HAY8829788.1"
                     /translation="MKSVRYLIGLFAFIACYYLLPISTRLLWQPDETRYAEISREMLA
                     SGDWIVPHLLGLRYFEKPIAGYWINSIGQWLFGANNFGVRAGVIFATLLTAALVTWFT
                     LRLWRDKRLALLATVIYLSLFIVYAIGTYAVLDPFIAFWLVAGMCSFWLAMQAQTWKG
                     KSAGFLLLGITCGMGVMTKGFLALAVPVLSVLPWVATQKRWKDLFIYGWLAVISCVLT
                     VLPWGLAIAQREPDFWHYFFWIEHIQRFALDDAQHRAPFWYYVPVIIAGSLPWLGLLP
                     GALYTGWKNRKHSATVYLLSWTIMPLLFFSVAKGKLPTYILSCFASLAMLMAHYALLA
                     AKNNPLALRINGWINIAFGVTGIIATFVVSPWGPMNTPVWQTFESYKVFCAWSIFSLW
                     AFFGWYTLTNVEKTWSFAALCPLGLALLVGFSIPDRVMEGKHPQFFVEMTQESLQPSR
                     YILTDSVGVAAGLAWSLQRDDIIMYRQTGELKYGLNYPDAKGRFVSGDEFANWLNQHR
                     QEGIITLVLSVDRDEDINSLAIPPADAIDRQERLVLIQYRPK"
     gene            complement(2113..3003)
                     /locus_tag="JNZ57_003741"
     CDS             complement(2113..3003)
                     /locus_tag="JNZ57_003741"
                     /EC_number="3.5.1.n3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-deoxy-4-formamido-L-arabinose-
                     phosphoundecaprenol deformylase"
                     /protein_id="HAY8829789.1"
                     /translation="MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDN
                     MGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHE
                     VGLHAWDHHAWQARSGNWDRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQKVIE
                     AKEAFHLRYNSDCRGAMPFRPLLESGNPGTAQIPVTLPTWDEVIGRDVKTEDFNGWLL
                     NRILRDKGTPVYTIHAEVEGCAYQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVV
                     RGNIAGREGWLGCQQIAGSR"
     gene            complement(3000..>4586)
                     /gene="arnA"
                     /locus_tag="JNZ57_003742"
     CDS             complement(3000..>4586)
                     /gene="arnA"
                     /locus_tag="JNZ57_003742"
                     /EC_number="1.1.1.305"
                     /EC_number="2.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-4-amino-4-deoxy-L-arabinose
                     formyltransferase/UDP-glucuronic acid oxidase ArnA"
                     /protein_id="HAY8829790.1"
                     /translation="HRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT
                     LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPSAFSY
                     VGNQKFTVWSSRVHPHASKAQPGSVISIAPLLIACGDGALEIVTGQAGDGITMQGSQL
                     AQTLGLVQGSRLNSQPACTVRRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGS
                     DAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL
                     DFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVS
                     KQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSP
                     IKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGKMLL
                     ASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQE
                     TIDETLDFFLRTVDLTDKPS"
BASE COUNT         1180 a         1237 c         1129 g         1040 t
ORIGIN      
        1 gtcaatacgg ttcttgctgc acgcttacca taagtgcgtc atcggcggca gatgacttgc
       61 cgcaaaaccc aggcttaatt gcgcaactga ggcaataatg acgctgaata atccccatat
      121 caggcccatt acaccgtact cccgaggatc acaatgccac caataatgaa cgccacccca
      181 caccagtgac gcggcgatac cggttcgtgc cacagtttta ctgcagccag cgtcacccag
      241 acaaaattca gacttaacat cgggtaggca atgcctaccg gtacgttctg caagaccagc
      301 agccagagca ccatggcaag accaagacaa gccagcgcca gtcccagcca cagcacgata
      361 tgtttgcgcc gtttgtttat cgccacaaag caggttgcct gtttctgaca caactgcccg
      421 gcaacgctaa gcaagctggc aaagactaat gttagccaga tcatttggga cgatactgaa
      481 tcagcaccag acgctcctga cgatcgatgg catctgcggg cggaatggcg agactgttga
      541 tatcttcatc gcggtcaacc gaaagcacga gtgtaataat cccctcctga cgatgttgat
      601 taagccagtt tgcgaactca tcaccgctga caaatctccc tttcgcatcc ggataattaa
      661 ggccgtattt caactcacct gtctggcgat acatgatgat gtcatcgcgt tgtaggctcc
      721 atgccagacc tgcggcaaca ccgacgctat cagtaagaat atagcggctt ggttgaagtg
      781 attcttgtgt catctcgaca aaaaattgcg gatgttttcc ttccatgact ctgtcaggaa
      841 ttgaaaatcc taccagcaac gccagcccca gcgggcaaag cgcggcgaaa gaccaggtct
      901 tttcgacgtt tgttaaggtg taccagccga aaaatgccca tagcgaaaaa atcgaccagg
      961 cacaaaagac tttatagctc tcgaaggttt gccacaccgg cgtgttcatt ggtccccacg
     1021 gggagaccac aaatgtggca ataatgccag tgacgccaaa agcgatgtta atccagccat
     1081 taatccgcag cgccagagga ttattttttg ctgccagcaa agcgtaatgc gccatcagca
     1141 ttgccagaga tgcaaagcag gaaagaatat aggtgggcaa tttaccttta gcgacggaga
     1201 aaaacagcag cggcattatc gtccagctca acaaatagac ggttgcggaa tgcttgcggt
     1261 ttttccagcc tgtgtacagt gcaccgggga gtaatcccag ccacggcagg ctaccggcaa
     1321 tgatgaccgg cacgtagtac cagaacggag ctctatgttg ggcatcatcc agtgcaaagc
     1381 gttgaatatg ctcaatccag aaaaaatagt gccagaagtc aggctcccgc tgcgctatcg
     1441 ccagtcccca agggagaacc gtcagtacgc aactgataac cgccagccag ccgtaaataa
     1501 agagatcttt ccagcgtttt tgcgtcgcta cccatggcag cacgcttaat accggcacgg
     1561 caagggcgag aaaacctttg gtcatcaccc ccatgccgca ggtgattccc agcagtaaaa
     1621 atcctgcgct tttgcctttc cacgtctgtg cctgcattgc cagccagaag ctgcacattc
     1681 ccgccaccag ccagaatgca ataaacggat cgagcacggc ataagtgccg atggcataga
     1741 caataaacaa tgagagataa attactgtgg cgagtagagc cagacgttta tcgcgccata
     1801 agcgcagagt aaaccaggtc accagcgcgg cagttaacag ggtcgcaaag ataacgcctg
     1861 cccgcacacc aaagttattc gcgccaaata gccattgccc aatgctgtta atccagtatc
     1921 cggcaatggg tttttcgaaa taacgtagcc ctaacagatg gggcacaatc cagtcgccgg
     1981 atgccagcat ttctcgactg atttccgcat aacgcgtttc atcgggttgc cagagcagac
     2041 gcgtgctgat cggtaacagg taatagcagg caataaacgc gaagaggccg ataaggtaac
     2101 gtaccgattt catcagcgac tacccgcaat ttgttggcaa cccagccagc cttcacgtcc
     2161 ggcaatattt ccgcgaacaa cttgtccgag cggcaacgtc tctgataaca gttcgcttaa
     2221 agggcaaaat gtcacgcctt cctgagctgc gcgtttgagg agatccacaa aattatgctg
     2281 ataagcgcag ccttcaactt ctgcatgaat ggtataaacc ggcgtgcctt tatctcgcag
     2341 gatgcggttg agtaaccaac cgttaaaatc ttctgttttc acatcccgac caatcacttc
     2401 atcccaggtg ggtaaggtca ccggaatttg cgcagtgcca gggtttcctg attcgagcaa
     2461 tggacggaac ggcatggccc cacgacaatc gctgttgtag cgcaaatgga acgcttcttt
     2521 tgcttcgatc accttctggt cggcacgcca gcccgcagcg gcagaacagg ttaccggttg
     2581 accgataatc tcttccagag tgcgaagacc gcgtgcaata tcgtcgatca ttgtttgccg
     2641 atcccagtta ccgctacggg cttgccaggc atggtgatcc caggcgtgca ggccgacttc
     2701 gtgatgttta gccgcttcac gaatgatatc ggcattggca tgaccaatct ctttacctgg
     2761 ccaggccgta cctgccagta aaatatccca gccataaagc gatgccgcgt ttgagcgcag
     2821 catcttccac aaaaactgtg gcttcaccag tcgccagaga tggcggccca tattgtccgg
     2881 gccgacgctg aaaaaaatgc tggcctgaat attatgctta ctcaagattt ccagcagacg
     2941 cggcacgcct tcacgggtgc cacgaaaggt atcgacatca atgcgtaagc ctactttggt
     3001 catgatggtt tatccgtaag atcaacggtg cgcaggaaga aatccagcgt ttcgtcgatg
     3061 gtttcctgca tatcaatttt cggctcccag tccaggcagc ggtgggcatt gcggatgctc
     3121 ggtttacgat gctctacgtc ctgatatcct ttgccgtagt agctgctact ttcgacaacg
     3181 cgaaagcccg caaacggtgg gaaatgatgg cgcagcggat gtttttcgaa gctcgccagc
     3241 agcatcttgc ccagttcctc aatgctcgct tcgttctcag gattgccaat gttgataatt
     3301 tcaccgtcgc agcgatttcc cgcattttcg ataatgcggt ataacgcctc gataccatcg
     3361 cgaatatcag taaagcagcg tttttgtttt ccgccatcaa tcagcttaat cggtgaacct
     3421 tctaccagat tgagaatgag ttgcgtaata gcgcgggagc tgccgattcg tgccgcatta
     3481 aggttatcca gtcgtggtcc catccagtta aacgggcgga agagggtgaa ctgtaaaccc
     3541 tctttttcgc cataggccca gatcacccga tcaagtaatt gttttgatac cgaataaatc
     3601 cagcgtggtt tattcaccgg gccgacgatt aaattagaat ggtcctcatc gaagtattta
     3661 tcgctacaca tcccataaac ttctgaagtt gacgggaaga tgattcgctt acggtacttc
     3721 acgcagtagc ggataatgcg cagattctct tcaaaatcga gttcaaatac gcgcagcggg
     3781 ttgcgggtat attcaatcgg cgtggctatc gccaccagcg gcaagacgac atcacatttt
     3841 ttgacatgat actcaatcca ttcggaatga atactgatat cgccttcaac aaagtgaaaa
     3901 tgcggatgat tcagaaaacg gcttatcgca tcgctgccaa tatccagacc gtaaacttca
     3961 taatgatctt cgcgcagcag gcgttctgtc agatggttgc caataaagcc attcaccccg
     4021 aggatgagta cccgggtacg gcgtcggacg gtgcaggcag gctggctatt caagcgtgaa
     4081 ccttgcacca ggcccagcgt ctgcgctaat tgcgagccct gcatagtaat gccgtcgccc
     4141 gcctgtccgg tgacgatttc cagcgcgcca tcgccacagg caatcaacag cggtgcaata
     4201 gaaatcacgc tccccggctg tgctttgctg gcatgaggat gaacacgcga cgaccagaca
     4261 gtgaatttct gattgccaac atagctgaag gcactcggcc acggatcggc aacggcacgt
     4321 accatgttgt gcagtacgga tgccggttta tgccattcaa ggaaactgtc atccggcgtt
     4381 ctgcgaccaa aacaggtggc ttcgttttcg cgctgggcga tttccagaat attaccgtgt
     4441 ttaatggcgg gtaatgtctg ttccagtagc tggcgcgcgg catggcacaa tttatgatgc
     4501 agcgtaatag cgatatcgtc tggcgcaatg gcaacgcgca gttgcgccac aatggcccca
     4561 gcatcggcac gttttaccat tcggtg
//
LOCUS       DADMHC010000247         4511 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.250, whole genome shotgun sequence.
ACCESSION   DADMHC010000247 DADMHC010000000
VERSION     DADMHC010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4511)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4511)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4511
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.250"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            80..351
                     /locus_tag="JNZ57_003743"
                     /pseudo
     CDS             80..351
                     /locus_tag="JNZ57_003743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313033.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3811 domain-containing protein"
     gene            complement(484..1356)
                     /gene="rluF"
                     /locus_tag="JNZ57_003744"
     CDS             complement(484..1356)
                     /gene="rluF"
                     /locus_tag="JNZ57_003744"
                     /EC_number="5.4.99.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2604) synthase RluF"
                     /protein_id="HAY8829791.1"
                     /translation="MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGD
                     QVKPGDIVKVNGQLIEPREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFP
                     IGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPIL
                     GTVTKKCKVKKEAPFVFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPL
                     GEWRDLTDDELIDLFKLIENSSSEAKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASN
                     GKRFTSPGRKKKGR"
     gene            1704..2651
                     /locus_tag="JNZ57_003745"
     CDS             1704..2651
                     /locus_tag="JNZ57_003745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709812.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
                     /protein_id="HAY8829792.1"
                     /translation="MENSDDIRLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKR
                     GRDQGIVTIAINYDYNENLWLEQQLKQKFGLKDVVVVSGNDEDEETQLAMMGLHGAQL
                     LDRLLEPGDIVGFSWGRAVSALVENLPQAGQSRQLICVPIIGGPSGKLESRYHVNTLT
                     YSAAAKLKGESHLADFPALLDNPLIRNGIMQSQHFKTISAYWDNLDVALVGIGSPAIR
                     DGANWHAFYGGEESDDLNARQVAGDICSRFFDIHGAMVETNMSEKTLSIEMNKLKQAR
                     YSIGIAMSEEKYSGIVGALRGKYINCLVTNSSTAELLLK"
     gene            2721..3527
                     /locus_tag="JNZ57_003746"
     CDS             2721..3527
                     /locus_tag="JNZ57_003746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY8829793.1"
                     /translation="MQTWLNLQDKIIIVTGGASGIGLAIVEELLAQGANVQMVDIHGG
                     DGQYEGHKGYQFWPTDISSAKEVNHTVAEIIQRFGRIDGLVNNAGVNFPRLLVDEKAP
                     AGQYELNEAAFEKMVNINQKGVFLMSQAVARQMVKQHDGVIVNVSSESGLEGSEGQSC
                     YAATKAALNSFTRSWSKELGKHGIRVVGIAPGILEKTGLRTPEYEEALAWTRNITVEQ
                     LREGYTKNAIPIGRAGRLAEVADFVCYLLSERASYITGVTTNIAGGKTRG"
     gene            3537..3944
                     /locus_tag="JNZ57_003747"
     CDS             3537..3944
                     /locus_tag="JNZ57_003747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sorbose transporter subunit IIA"
                     /protein_id="HAY8829794.1"
                     /translation="MVNAIFCAHVKLACAMLESVQMVYGDARVEAVEFVPGENAGDIV
                     AKLGRLVSIHNQDEWLIAVDLQCGSPWNAAAMLAMRNPRLRVISGLSLPLALELVDNQ
                     DSMNVDEVCEHLTQIAKQTCVVWKQLATAEEDF"
     gene            3944..4438
                     /locus_tag="JNZ57_003748"
     CDS             3944..4438
                     /locus_tag="JNZ57_003748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system
                     mannose/fructose/N-acetylgalactosamine-transporter subunit
                     IIB"
                     /protein_id="HAY8829795.1"
                     /translation="MNITLARIDDRLIHGQVTTVWSKVANAQRIIICNDEVYNDEVRR
                     TLLRQAAPPGMKVNVVNIEKAVAVYHNPQYQDETVFYLFTRPQDALAMVHQGVKIDTL
                     NIGGMVWRPGKKQLTKAVSLDDDDINAFHELNNLGVILDLRVVASDPSINIIDKINEQ
                     LIAN"
BASE COUNT         1203 a         1068 c         1160 g         1080 t
ORIGIN      
        1 aggcaaaatg aatattatca gttctgctcg caaacgaatt cccgtacact gaactctctg
       61 gctcactgag ggcaccatca tggcactccc ccgtattacc caaaaagaga tgactgaacg
      121 cgagcagcgt gaacttaaaa cactgctgga tcgggcgcgg attgcgcatg gtcgcgtact
      181 gaccaactcc gaaaccaaca gcattaagaa agagtacatc gataaattaa tggtcgagcg
      241 tgaggctgaa gcgaaaaagc ccgccaattg aagaaaaagc aggcttataa accggatcct
      301 gaagcgtcat ttagctggtc agcaaatacg tcgacgcgcg gcaggcgcta atgaacaatc
      361 aacgcctgag attttcactc gtctgtgtgg acacaatctt cccctcaccc taaccctctc
      421 cccgaagggg cgaggggact gtccgagctc tttttggacg ttttcatcag tctgaggcgt
      481 taatcagcgt cccttctttt tacgccccgg cgaggtaaaa cgcttaccgt tggacgccgg
      541 gcgaccgcct ttttccgccg ttttttccat cttaacgact ggacgtttga tgcccgctgt
      601 tttcggtttg gccttcgctt taggttttgc ctcggaagag gaattttcga tgagcttaaa
      661 gaggtcgatt aactcatcgt cggttaaatc gcgccactcc cccagcggaa tgccgcttaa
      721 gctgacgttc ataatgcgcg tacgttccag ctttttcact tcatagccga aatgctcgca
      781 catgcgccgg atctgacggt tcagcccctg caccagggta atgcggaaga caaacggcgc
      841 ttcttttttg actttgcact ttttcgtcac cgtcccgagg atcggcaccc ccgcccccat
      901 accacgaata aattcatcgg taatcggttt atcgaccgtc accagatact ctttctcatg
      961 atcgttaccc gcacggagga tcttattcac cagatcgccg tgattggtga ggaaaatcag
     1021 cccctgggag tctttatcca ggcggccaat cgggaacacg cgtttgctgt ggttaacgaa
     1081 atcgacaatg ttatcgcgct cgccatcttc ggtggtgctg acaataccga cgggcttgtt
     1141 cagggcgata agtaccaaat cttcggcttc ccgaggctca atcaactgac cgtttacttt
     1201 cacaatgtcg ccgggtttca cctgatcgcc aatggtggct cgcttgccat taaggaacac
     1261 attgccttgc tcgatatagc gatccgcttc gcggcgtgag caaattccgc tttcgctgat
     1321 gtatttattt aaacggactg atgagtcggg cagcataaat tctcctgtaa aacgcggaat
     1381 ataccgtacc tcttagcggg gaaaaacagg gttatgcggc aacgtcgaaa ttaaatgtga
     1441 tctgccacgc cttttatcac aaaagtgtct ccggaagtac gatgcaaatt tgcctggcaa
     1501 aataaggata atcaacatat tacgaatcgc tgcacacctg tgctgatgac tactacgcag
     1561 agaaacaaat gtgcaagaga aagcgctata tctccccatg caaagagtga aaaatcgctt
     1621 tgaaaggccc tcatgatggg gttatatcag atcaagcggt gagaaagcgt atttgcacaa
     1681 atgtgcagaa ccaggaggcg gcaatggaaa acagtgacga tatccgtttg attgtgaaga
     1741 ttgcccaact ctattacgaa caggatatga cgcaggcgca aatcgcgcgc gaactgggta
     1801 tttaccgcac caccatcagc cgcttgctta aacgaggccg cgatcaggga attgtcacca
     1861 tcgccatcaa ctatgactac aacgaaaatc tctggctgga gcagcaactg aagcaaaagt
     1921 ttggcctgaa agacgttgtg gtggtgtcgg gaaatgatga ggatgaagag actcaactgg
     1981 cgatgatggg gttacacggc gcgcaactgc tggatcgctt gctggagcct ggcgatattg
     2041 tcggtttttc ctggggtcgc gcggtgagcg cactggttga aaacttgccg caggcggggc
     2101 aatcgcggca gttaatctgc gtaccaatta ttggcggacc gtccggtaaa ctcgaaagcc
     2161 gctatcatgt aaacacatta acctacagcg cggcagcgaa gctgaaaggg gaatcgcatc
     2221 tcgcggattt tccggctctg ctggataacc cattaattcg taatgggatc atgcagtctc
     2281 agcactttaa aaccatctct gcctactggg ataatctgga tgtcgccctg gtgggaattg
     2341 gctcaccggc cattcgcgac ggcgctaact ggcatgcgtt ttatggtggt gaagagagtg
     2401 acgacctgaa tgcccgccag gttgctggcg atatttgctc gcgctttttt gatattcacg
     2461 gcgcaatggt tgaaacgaat atgagcgaaa aaacactctc tatcgaaatg aataaattaa
     2521 agcaagcacg atattccatt ggcattgcca tgagtgaaga aaaatacagc ggaattgttg
     2581 gtgcactgcg tggaaaatat attaattgtc tggtaacgaa tagcagcaca gctgaactat
     2641 tactgaaata aaaatcttcc cgatgtttag cgtaataaaa attacggcgg ggccctatta
     2701 tctaaaatca ggagtctgtt atgcaaacgt ggttaaattt gcaggataaa atcattattg
     2761 tcaccggcgg cgcatccggt attggtctgg cgattgtaga ggaattatta gcacaaggcg
     2821 caaacgtaca gatggtagat attcacggtg gcgatggtca atatgaaggt cataaaggct
     2881 atcagttttg gccgaccgat atttccagcg ccaaagaggt aaatcatacg gtagcggaaa
     2941 ttatccagcg ttttggtcgc atcgacggtc tggtcaataa cgccggggtc aatttcccgc
     3001 gtctgctggt cgatgagaaa gcgcctgccg ggcagtatga actcaacgaa gctgcattcg
     3061 aaaaaatggt caatatcaac cagaaaggcg tttttctgat gtcgcaggcg gtggcgcgac
     3121 agatggtcaa acaacatgat ggcgtgattg tgaatgtttc ctcagaaagt ggactggaag
     3181 gctcagaagg ccaaagctgt tacgccgcta ccaaagccgc gcttaatagc ttcacgcgat
     3241 cctggtcgaa agaattgggt aaacacggta tccgtgtggt cggtatcgcg ccggggattc
     3301 tggaaaaaac aggactgcgc acgccggaat atgaagaagc gctggcgtgg acgcgcaata
     3361 tcaccgtcga gcagctgcgt gaaggctata ccaaaaacgc cattcctatt gggcgcgccg
     3421 gaagattagc agaagtcgct gattttgttt gttatctgct gtctgaacgc gccagctata
     3481 tcaccggagt aaccactaac attgcgggcg gcaaaacgcg cggctaagga ggctttatgg
     3541 tcaatgccat tttttgcgcc cacgtcaaat tagcttgcgc catgctggaa tcggttcaga
     3601 tggtgtacgg cgacgccagg gtcgaggcag ttgaatttgt gcccggcgag aacgccggag
     3661 acatcgtagc aaagctggga aggttagtaa gcattcacaa tcaagatgag tggctgattg
     3721 ccgtggattt acagtgcggc agcccgtgga atgcggcagc gatgcttgcg atgcgcaatc
     3781 ctcgtctgcg ggtaatcagc ggcctttctc tgccgctggc gctcgaactg gttgataacc
     3841 aggacagcat gaatgttgat gaagtgtgtg aacacctgac gcaaatcgca aagcaaacct
     3901 gcgttgtctg gaaacaactg gcaacggcag aggaggattt ctgatgaaca ttacgctcgc
     3961 ccgcattgat gaccgcctga tccacggtca ggtcactacc gtctggtcga aagtggctaa
     4021 cgcccagcgc attattatct gcaatgacga agtttataac gatgaagttc gccggacatt
     4081 attgcgtcag gctgcgccac cgggaatgaa ggttaacgtg gtcaatattg aaaaagccgt
     4141 cgctgtttat cacaacccgc aatatcagga cgaaaccgtt ttttatcttt tcactcgccc
     4201 acaggatgcc ttagcgatgg ttcaccaagg ggtaaaaata gacaccctaa atattggcgg
     4261 catggtctgg cggcccggta aaaaacagtt aaccaaagcg gtttcattag atgatgatga
     4321 tattaacgca tttcatgagt taaataatct tggcgtcata ctggatttac gcgtcgtagc
     4381 gtcagatccc tcaatcaata ttatcgacaa aataaacgaa cagttaatcg caaattaaat
     4441 aatagcgctt gtgtacatat gctttaacag gcagggatga cgacacttaa aaggtgaaaa
     4501 atcatggaaa t
//
LOCUS       DADMHC010000248         4376 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.251, whole genome shotgun sequence.
ACCESSION   DADMHC010000248 DADMHC010000000
VERSION     DADMHC010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4376
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.251"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(4..324)
                     /gene="chbB"
                     /locus_tag="JNZ57_003749"
     CDS             complement(4..324)
                     /gene="chbB"
                     /locus_tag="JNZ57_003749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N,N'-diacetylchitobiose transporter subunit
                     IIB"
                     /protein_id="HAY8829796.1"
                     /translation="MEKKHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLA
                     GEKGLNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAIKK
                     AAAN"
     gene            complement(622..960)
                     /gene="osmE"
                     /locus_tag="JNZ57_003750"
     CDS             complement(622..960)
                     /gene="osmE"
                     /locus_tag="JNZ57_003750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotically-inducible lipoprotein OsmE"
                     /protein_id="HAY8829797.1"
                     /translation="MNKNMAGILSAAAVLTMLAGCTAYDRTKDQFVQPVVKDVKKGMS
                     RAQVAQIAGKPSSEVSMIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQTCA
                     EYDTDPQAAK"
     gene            1162..1989
                     /gene="nadE"
                     /locus_tag="JNZ57_003751"
     CDS             1162..1989
                     /gene="nadE"
                     /locus_tag="JNZ57_003751"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-dependent NAD(+) synthetase"
                     /protein_id="HAY8829798.1"
                     /translation="MTLQQQIIKALGSKPQINAEEEIRRSVDFLKSYLQTYPFIKSLV
                     LGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQADEQDCQDAIAFIQ
                     PDRVLTVNIKGAVLASEQALREADIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGT
                     DHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQLLAALACPEHLYKKAPTADLEDDR
                     PSLPDEVALGVTYDNIDDYLEGKNVPQQVARTIENWYLKTEHKRRPPITVFDDFWKK"
     gene            2219..3106
                     /gene="cho"
                     /locus_tag="JNZ57_003752"
     CDS             2219..3106
                     /gene="cho"
                     /locus_tag="JNZ57_003752"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease Cho"
                     /protein_id="HAY8829799.1"
                     /translation="MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGES
                     DTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQ
                     QPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIA
                     DEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCW
                     PWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEDATTLIRTPAGFDHDGYKILCKPL
                     LSGNYEITELDPANDQRAS"
     gene            complement(3066..3641)
                     /gene="ves"
                     /locus_tag="JNZ57_003753"
     CDS             complement(3066..3641)
                     /gene="ves"
                     /locus_tag="JNZ57_003753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="environmental stress-induced protein Ves"
                     /protein_id="HAY8829800.1"
                     /translation="MEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIA
                     ANGEFSLFPGMERIVTLLEGGEMLLESADRFNHTLKPLQPFAFAADQVVKAKLTEGQM
                     SMDFNIMTRLDVCKAKVRIAERTFTTFGSRGGVVFVINGAWQLGDKLLTTDQGACWFD
                     GRHTLRLLQPQGKLLFSEINWLAGHSPDQVQ"
     gene            complement(3844..4314)
                     /gene="spy"
                     /locus_tag="JNZ57_003754"
     CDS             complement(3844..4314)
                     /gene="spy"
                     /locus_tag="JNZ57_003754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-independent periplasmic protein-refolding
                     chaperone"
                     /protein_id="HAY8829801.1"
                     /translation="MRKLTALFVASTLALGAANLAHAAAPADAKPMMHHKGKFGPHQD
                     MMFKDLNLTDAQKQQIREIMKGQRDQMKRPPLEERRAMHDIIVSDTFDKAKAEAQIAK
                     MEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERPAAKGKMPATAE"
BASE COUNT         1067 a         1087 c         1053 g         1169 t
ORIGIN      
        1 aaattaattt gctgcggctt ttttaatcgc tgcaaccgca gccttaagca cgcctaaacc
       61 atcgactttg ccataaagca gcgagtcaat tacttcaacc ggtttgttgg gtaacaaacg
      121 ctggatttcg ggcaacatat aagcaatctg cggccctaat aacacgacat cggcattcag
      181 acctttttca ccagccagtg tttccggaaa tgcttcaata atgaccggaa cttcatattt
      241 ttctgcctgt gcgcgcattt ttgataccag taaagaggta gacatgcccg cagaacaaaa
      301 cagataaatg tgtttctttt ccataaaact gccctcatcg acgattatct gtcagccaga
      361 cactccgcaa gccttaacct gcttccatgc tctgggtaac ttgcgaaacc aacatgactt
      421 tttttgtggc tgaaaggagt atacggtata gacctgagca atagtatttc tttgacctta
      481 taaattgtct ctccttgacc tgcggttatg accctcttca catttcgggc aaataattcg
      541 cgaagataat taagaactca ggccaaaaaa accggcgcaa tggccggttt ccgttgttac
      601 tcaagctttc aaacgaagtg attacttcgc agcctgtgga tcagtgtcgt attcagcaca
      661 ggtctgataa ccggagttga tgacatgtcc ggtatcatct aacgcgacaa agtaggtttc
      721 tgctttacca tcacgttgac ccaggatgta ggtctggcaa gtaccacgag catggatcat
      781 gctcacttca gacgaaggtt tacccgcaat ttgtgcaacc tgcgcccggc tcatgccttt
      841 tttgacgtct ttcaccacag gctgtacaaa ctggtctttg gtacgatcat aagccgtaca
      901 acccgccagc atggttaata ccgccgctgc actcagaatt cctgccatat tcttgttcat
      961 attccgtcct cttgtttatc agcgtgttag ataagcctgg aatacattgg gcgctttttc
     1021 aagcccgtga acgaaacggc tccgctttca gaggattcct gtatgacgtt ttatccacca
     1081 ttcaacccgc tgtcgcttgt cgtttcagta gcgacgggtt agctttaagg aagttttgtc
     1141 ttttctgtct ggaggggttc aatgacattg caacaacaaa taataaaggc gctgggctca
     1201 aaaccgcaga ttaatgctga agaggaaatt cgtcgtagtg tcgattttct gaaaagctac
     1261 ctgcaaactt atccgttcat taaatcactg gtgctcggga tcagcggcgg tcaggactcc
     1321 acgcttgccg gtaagctgtg ccagatggcg attaatgagc tgcgccagga gaccggcaac
     1381 gaatcactgc aatttattgc cgtacgcctg ccctatggtg ttcaggccga cgaacaagat
     1441 tgccaggatg ccattgcctt tattcaaccg gatcgcgtat taaccgttaa tatcaagggc
     1501 gcggtattgg ccagcgaaca ggcgctgcgc gaagcggaca ttgaactgag cgattttgtc
     1561 cgtggcaatg aaaaagcgcg tgagcggatg aaagcacaat atagcattgc gggtatgacc
     1621 agcggtgtcg tggtgggcac cgatcatgca gcagaagcta ttaccggatt cttcactaaa
     1681 tatggtgacg gcggtacgga cattaatccg ctgtatcgtc tcaacaaacg tcagggtaaa
     1741 cagttactgg cggcattagc ttgcccggaa cacctttata agaaagcgcc aacggccgat
     1801 ctggaagatg atcgcccttc tctgccagat gaagtggctc tcggcgtgac ctatgacaat
     1861 atcgacgact atctggaagg gaaaaacgta cctcaacagg tcgccagaac aatagagaac
     1921 tggtatctga aaaccgaaca taaacgccgt ccgccaatta ccgttttcga tgatttctgg
     1981 aaaaagtaat aatttgcaca tattggattg tgcgaaaaag agtaatttgt tcacgccgga
     2041 tgcggcgtga acgccttatt cgacctataa aactatgcaa attcaataca ttgcaggagt
     2101 cgaataggcc tgacaggcgt agcacgtcag acggtgtaac ctttgtcatc gacccgcctc
     2161 ttttttaatc gcttcccgcc tgttacactg gatagataac cagcattcgg agtcaacagt
     2221 ggtacggcgt ttaacttctc cgcggctcga atttgaagct gcggcaattt atgaatatcc
     2281 cgaacattta cgttcattcc ttaatgactt acccacccga ccaggggtgt atctgtttca
     2341 tggtgaaagt gacaccatgc cgctctatat cggcaaaagc gttaacatcc gcagccgcgt
     2401 cctttctcat ttacgtaccc cggatgaagc cgccatgcta cggcaatccc gacggatcag
     2461 ctggatatgt accgccggtg aaatcggcgc tctgctcctt gaagcgcgat taatcaaaga
     2521 acaacagccg ctgtttaata aacggttgcg ccgcaatcgc cagctctgtg ccctgcaatt
     2581 aaatgaaaag cgcgtcgatg tggtgtatgc caaagaggtg gatttttcac gagcccccaa
     2641 cctgtttggc ctgtttgcca ataggcgcgc agctttgcaa gcattgcaga ccatcgctga
     2701 tgaacaaaaa ctttgttatg gcctgctggg actggaaccg ttaagtcgcg gtcgtgcatg
     2761 ttttcgttca gcgctaaaac gttgcgccgg agcatgctgc ggtaaagaga gccatgagga
     2821 acatgcgcta cgcttgcgcc agtctctgga gcgtttgcgg gtggtgtgtt ggccttggca
     2881 aggggcggtg gcgctgaaag aacagcaccc ggaaatgact caatatcata ttattcaaaa
     2941 ctggctgtgg ctgggggcgg ttaattcgct ggaagacgcg acaacgttaa ttcggacacc
     3001 cgccgggttt gatcacgacg gttataaaat tctttgtaag ccgctgcttt ccggtaacta
     3061 tgaaattact gaacttgatc cggcgaatga ccagcgagcc agttgatttc actgaacaac
     3121 agtttacctt gcggttgtaa aagccgcagg gtgtgcctgc catcgaacca gcacgcgccc
     3181 tggtcggtag tgagcaattt atcgcccagt tgccacgccc cgttaatcac aaacaccacc
     3241 ccgccgcgtg agccaaaggt agtaaacgta cgttcggcaa ttctgacttt cgccttacag
     3301 acatccaggc gtgtcatgat gttgaaatcc atcgacatct gcccttccgt cagtttcgct
     3361 tttaccacct ggtccgctgc aaaggcaaaa ggctgtaacg gttttaaggt atggttaaag
     3421 cggtctgcgc tttcaaggag catctcgccg ccttccagca acgtcactat cctttccatg
     3481 ccgggaaaca aagaaaactc cccattcgcc gcgatggatg caatgctggc acgccagtaa
     3541 aaatcacgtt ttgccggtgg gaaagtgcaa atttcgcgcg tttcaccggc agcatttcgc
     3601 cacagattca ccgacatttt acgcatatca aagtattcca tactcgctcc cggcccgttc
     3661 ttttcattgt tatcgttcag gtaaccgtgg atggttatcg gcaactcggg tgatttacgt
     3721 tagtggtgat caggcttttt ttacaactgt ttgagaagag aaaagaaaac cgccgatcct
     3781 gtccaccgca ttactgcaag gtagtggaca agaccggcgg tcttaagttt tttggctgaa
     3841 agattattca gcagttgcag gcattttacc ttttgccgct ggacgttctg tcagacgctt
     3901 ctcaaaatta gcattaaatt gctttttctg ttccggcgtc aggatgttgt aaattttgtt
     3961 ctgggtttcc atgtgcgcca gcatgttagc tttgcgctgt tcttccattt ttgcgatctg
     4021 cgcttcagct tttgctttat cgaaggtatc gctgacaatg atgtcatgca ttgcgcggcg
     4081 ttcttccagc ggcggacgtt tcatctggtc acgctggcct ttcatgattt cgcggatctg
     4141 ctgtttctgc gcgtcggtca ggttcaggtc tttgaacatc atgtcctgat gcggaccgaa
     4201 cttgcctttg tggtgcatca tcggcttcgc gtcagccggt gctgcggcat gggccaggtt
     4261 agccgcgcca agagccaggg tagaggcaac aaacagtgca gttaatttac gcatattcta
     4321 tatccttcct ttcagttatt tattacggct ttcttaagta gcgtgccgtg ttgacg
//
LOCUS       DADMHC010000249         4324 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.252, whole genome shotgun sequence.
ACCESSION   DADMHC010000249 DADMHC010000000
VERSION     DADMHC010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4324)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4324)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4324
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.252"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..213)
                     /locus_tag="JNZ57_003755"
     CDS             complement(<1..213)
                     /locus_tag="JNZ57_003755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416381.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HAY8829802.1"
                     /translation="MLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKF
                     RASGQPVFLVRVGWSADYAEALKQPVD"
     gene            523..2295
                     /gene="aspS"
                     /locus_tag="JNZ57_003756"
     CDS             523..2295
                     /gene="aspS"
                     /locus_tag="JNZ57_003756"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HAY8829803.1"
                     /translation="MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGI
                     VQVFFDPDRADALKLASELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTII
                     NRADVLPLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDI
                     ETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRD
                     EDLRADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAE
                     RRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQI
                     DEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMI
                     FFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGEGGLTAMHHP
                     FTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEE
                     EQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTE
                     APSFANPTALAELSIQVVKKAENN"
     gene            2413..2865
                     /gene="nudB"
                     /locus_tag="JNZ57_003757"
     CDS             2413..2865
                     /gene="nudB"
                     /locus_tag="JNZ57_003757"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HAY8829804.1"
                     /translation="MKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVE
                     EGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESW
                     FCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA"
     gene            2894..3634
                     /locus_tag="JNZ57_003758"
     CDS             2894..3634
                     /locus_tag="JNZ57_003758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HAY8829805.1"
                     /translation="MAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPD
                     ANPRLRAAVDKALSNNMTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMIECL
                     SDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAE
                     DVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMR
                     LIDMLEDCDDVQEVYHNGEISDEIAATL"
     gene            3669..4190
                     /gene="ruvC"
                     /locus_tag="JNZ57_003759"
     CDS             3669..4190
                     /gene="ruvC"
                     /locus_tag="JNZ57_003759"
                     /EC_number="3.1.22.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005068993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HAY8829806.1"
                     /translation="MAIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSR
                     LKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEY
                     AARQVKQTVVGIGSAEKSQVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQM
                     SESRLNLARGRLR"
BASE COUNT         1071 a         1074 c         1212 g          967 t
ORIGIN      
        1 atcaaccggc tgttttaatg cttcggcgta atcggcagac cagccaactc gcaccagaaa
       61 cacgggctga ccgctggcgc gaaatttcgc cgccagcttc ccggcgcgat taactacctc
      121 atcggcagta tgtggaccac cggcaaaagg taagatgcct tcttgtaaat cgatcaccac
      181 caacgcagta gttttagcat taagttcaag catgctgact cctgaaaaaa caaaatcgtg
      241 cctcatacct taatgcgatt agccgatggc ggaacgacaa attttgttaa tgtttatgag
      301 ttcgggcaac acctttatag caaactggcg tagagtctga tttcaggccc gatataaagt
      361 ggtaacgagg cgttccagcg cgggccaggc tcttacggtg cggcagaatt tccagtataa
      421 tagccgcctt ttttcattca gttgtgacat acagctaacg ctgcgacttg gtcacctgcg
      481 cagcaggggg catccgccgg cagctaagtt aagggatatc tcatgcgtac agaatattgt
      541 ggacagctcc gtttgtccca cgtggggcag caggtgactc tgtgtggttg ggtcaaccgt
      601 cgtcgtgatc ttggtagcct gatcttcatc gatatgcgcg accgcgaagg tatcgtgcag
      661 gtatttttcg atccggatcg tgcggacgcg ttaaagctgg cctctgaact gcgtaatgag
      721 ttctgcattc aggtcacggg caccgtacgt gcgcgtgacg aaaaaaatat taaccgcgat
      781 atggcgaccg gcgaaatcga agtgctggcg tcctcgctga ctatcatcaa ccgcgcagat
      841 gttctgccgc ttgactctaa ccacgtcaac accgaagaag cgcgtctgaa ataccgctac
      901 ctcgacctgc gtcgtccgga aatggctcag cgcctgaaaa cccgcgctaa aatcaccagc
      961 ctggtgcgcc gttttatgga tgaccacggc ttcctcgaca tcgaaactcc gatgctgacc
     1021 aaagccacgc cggaaggcgc gcgtgactac ctggtgcctt ctcgtgtgca caaaggtaaa
     1081 ttctacgcac tgccgcaatc cccacagtta ttcaaacagc tgctgatgat gtccggtttt
     1141 gaccgttact atcagatcgt taaatgcttc cgtgacgaag acctgcgcgc tgatcgtcag
     1201 cctgagttta ctcagatcga tgtggaaact tctttcatga ccgcgccgca agtgcgtgaa
     1261 gtgatggaag cgctggtgcg tcatttgtgg ctggaagtga agggcgtgga tctgggcgat
     1321 ttcccggtaa tgacctttgc ggaagcagaa cgccgttatg gttctgataa accggatctg
     1381 cgtaacccga tggaactgac cgacgttgcc gatctgctga aatctgttga gtttgcagta
     1441 tttgcggggc cggcgaacga tccgaaaggc cgtgttgccg ctctacgtgt tccgggtggc
     1501 gcatcgctga cccgtaagca gatcgacgaa tacggtaact tcgttaaaat ctacggcgcg
     1561 aaaggtctgg cttacatcaa agttaacgaa cgcgcgaaag gtctggaagg tatcaacagc
     1621 ccggtagcga agttccttaa tgcagaaatc atcgaagcca tcctggatcg tactgccgcg
     1681 caagatggcg atatgatttt cttcggtgcc gacaacaaga aaattgttgc cgacgcgatg
     1741 ggcgcactgc gcctgaaagt gggtaaagac cttggtctga ccgacgaaag caaatgggca
     1801 ccgctgtggg ttatcgactt cccgatgttt gaagacgacg gtgaaggcgg cctgacggca
     1861 atgcaccatc cgttcacctc accgaaagac atgactgctg cagaactgaa agctgcaccg
     1921 gaaaatgcgg tggcgaacgc ttacgatatg gtcatcaatg gttacgaagt gggcggtggt
     1981 tcagtacgta tccataatgg tgatatgcag cagacggtgt ttggtattct gggtatcaac
     2041 gaagaggaac agcgcgagaa attcggcttc ctgctcgacg ccctgaaata cggtactccg
     2101 ccgcacgcag gtctggcatt cggtcttgac cgtctgacca tgctgctgac tggcaccgac
     2161 aatatccgtg acgttatcgc cttcccgaaa accacggcgg cagcgtgtct gatgactgaa
     2221 gcaccgagct ttgctaaccc gactgcactg gctgagctga gcattcaggt tgtgaagaag
     2281 gcagagaata actgatatga ctcaaataca cgaaatcatt cgcgttgcat caaggcggca
     2341 attgagtgaa ctcccatgag catagataac tatgtgaatg ggatgagcga aggcagtcaa
     2401 cgaagaggca gcgtgaagga taaagtgtat aagcgtcccg tttcgatctt agtggtcatc
     2461 tatgcacaag atacgaaacg ggtgctgatg ttgcagcggc gtgacgatcc cgatttctgg
     2521 cagtcggtaa ccggcagcgt ggaagagggt gaaaccgcgc cgcaagctgc catgcgcgaa
     2581 gtaaaggaag aggtcaccat tgatgttgtc gctgaacaac tgaccttaat tgactgtcag
     2641 cgcacggtag agtttgaaat tttttcacat ttacgtcatc gctatgcgcc gggcgtgacg
     2701 cgtaatacgg aatcatggtt ctgtcttgcg cttccgcatg agcggcagat cgttttcact
     2761 gaacatctgg cttacaagtg gcttgatgcg cctgctgcgg cggcgctcac taagtcctgg
     2821 agcaaccggc aggcgattga acagtttgta attaacgctg cctgaacagg cagggctatc
     2881 tggagatatt tttatggcag gtcatagtaa atgggccaac accagacatc gtaaagctgc
     2941 gcaggatgct aagcgcggta aaatcttcac taaaatcatt cgtgagctgg taaccgcggc
     3001 taagctgggc ggtggcgatc cggacgctaa cccgcgtctg cgtgcggcgg tggataaagc
     3061 actgtctaac aacatgaccc gtgacacact gaaccgcgca attgcacgtg gtgtgggcgg
     3121 tgatgatgat gcaaacatgg aaaccatcat ctacgaaggt tacggtcctg gcggcacggc
     3181 aatcatgatt gaatgtctgt ctgacaaccg caaccgtacc gttgctgaag tgcgtcatgc
     3241 attcagcaaa tgtggcggta acctcggtac agatggttcc gtagcctatc tgttcagcaa
     3301 aaaaggcgtg atctccttcg agaaaggcga tgaagacacc atcatggaag cagctctgga
     3361 agcaggtgct gaagacgttg tgacctatga tgacggcgcg attgatgtct acactgcatg
     3421 ggaagaaatg ggtaaagtgc gcgacgctct ggaagcggca ggtctgaaag cagacagcgc
     3481 ggaagtttcc atgatcccgt ccaccaaagc tgatatggat gcagaaaccg caccgaaact
     3541 gatgcgtctg atcgatatgc tggaagattg cgacgacgtg caggaagttt accataacgg
     3601 tgaaatctct gatgagattg cagcgactct ctgatgaggc ctgctaaaca gcaaaacgga
     3661 gacgcgtgat ggctattatt ctcggcattg acccgggttc gcgcgtgacc ggctatggcg
     3721 tcatccgcca ggtaggcagg caactgtcct acctgggtag cggatgcata cgcaccaagg
     3781 tggatgattt accgtctcgt ctgaagctca tctatgcggg tgtgacggaa atcatcaccc
     3841 agttccagcc agattatttc gccattgaac aagtctttat ggccaaaaat gccgactcgg
     3901 ctctgaaact ggggcaggcg cgcggcgtgg cgattgtggc ggcggtgaat caggaattgc
     3961 cggtatttga atatgcggca cgtcaggtaa agcaaacggt ggtaggtatt ggtagtgccg
     4021 aaaaaagtca ggtgcagcat atggtccgca ccttgctgaa actgcccgct aatccacagg
     4081 cggatgccgc cgatgcgtta gctatcgcga ttacccattg tcacgtcagc cagaatgcaa
     4141 tgcagatgag cgaatcgcgg ctgaacctgg cgagagggcg actgcgttaa gttataccgc
     4201 ctcggtcagt tcaggctgag gcgtttcaac tccctccgcg tgaatcaaca ccaaacccgg
     4261 atgatgccac aaactggctg gcgtgacggt tttacgctcc cacggaatag aacctaagaa
     4321 ccag
//
LOCUS       DADMHC010000250         4322 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.253, whole genome shotgun sequence.
ACCESSION   DADMHC010000250 DADMHC010000000
VERSION     DADMHC010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4322)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4322)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4322
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.253"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(1..113)
                     /locus_tag="JNZ57_003760"
                     /pseudo
     CDS             complement(1..113)
                     /locus_tag="JNZ57_003760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000080164.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            185..367
                     /locus_tag="JNZ57_003761"
     CDS             185..367
                     /locus_tag="JNZ57_003761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001296208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization protein"
                     /protein_id="HAY8829807.1"
                     /translation="MNHPVIGVVTKADLASMEQISLVKSWLREAGAHNVLVTSAVNNN
                     GVTELFALLHTEEGCC"
     gene            complement(468..797)
                     /locus_tag="JNZ57_003762"
     CDS             complement(468..797)
                     /locus_tag="JNZ57_003762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310836.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF496 family protein"
                     /protein_id="HAY8829808.1"
                     /translation="METTKPSFQDVLEFVRLFRRKNKLQREIQDVEKKIRDNQKRVLL
                     LDNLSDYIKPGMSVEAIQGIIASMKGDYEDRVDDYIIKNAELSKERRDISKKLKAMGE
                     MKNGEAK"
     gene            complement(969..1487)
                     /locus_tag="JNZ57_003763"
                     /pseudo
     CDS             complement(969..1487)
                     /locus_tag="JNZ57_003763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416512.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1582..2562)
                     /locus_tag="JNZ57_003764"
     CDS             complement(1582..2562)
                     /locus_tag="JNZ57_003764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110-like element IS621 family transposase"
                     /protein_id="HAY8829809.1"
                     /translation="MEHELHYIGIDTAKEKLDVDVLRPDGRHRTKKFANTTKGHDELV
                     SWLKGHKIDHAHICIEATGTYMKPVAECLYDAGYIVSVINPALGKAFAQSEGLRNKTD
                     TVDARMLAEFCRQKRPAAWEAPHPLERALRALVVRHQALTDMHTQELNRTETAREVQR
                     PSIDAHLLWLEAELKRLEKQIKDLTDDDPDMKHRRKLLESIPGIGEKTSAVLLAYIGL
                     KDRFAHARQFAAFAGLTPRRYESGSSVKGASRMSKAGHVSLRRALYMPAMVATSKTEW
                     GRAFRDRLAANGKKGKVILGAMMRKLAQVAYGVLKSGVPFDASRHNPVAA"
     gene            complement(2755..3306)
                     /locus_tag="JNZ57_003765"
                     /pseudo
     CDS             complement(2755..3306)
                     /locus_tag="JNZ57_003765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416512.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
     gene            complement(3504..3977)
                     /gene="sbmC"
                     /locus_tag="JNZ57_003766"
     CDS             complement(3504..3977)
                     /gene="sbmC"
                     /locus_tag="JNZ57_003766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor SbmC"
                     /protein_id="HAY8829810.1"
                     /translation="MNYEIKQEEKRTVAGFHLVGPWEQTVKKGFEQLMMWVDSKNIVP
                     KEWVAVYYDNPDETPAEKLRCDTVVTVPGYFTLPENSEGVILTEITGGQYAVAVARVV
                     GDDFAKPWYQFFNSLLQDSAYEMLPKPCFEVYLNNGAEDGYWDIEMYVAVQPKHH"
     gene            complement(4096..>4322)
                     /locus_tag="JNZ57_003767"
     CDS             complement(4096..>4322)
                     /locus_tag="JNZ57_003767"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416514.4"
                     /note="removes C-terminal D-alanyl residues from
                     sugar-peptide cell wall precursors; penicillin-binding
                     protein 6B; one of four, DD-carboxypeptidase low-molecular
                     weight penicillin-binding proteins that remove terminal
                     D-alanine from pentapeptide side chains; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase DacD"
                     /protein_id="HAY8829811.1"
                     /translation="FWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEIELYDRDK
                     QVAHWPLVTLESVGEGSMFSRLSDYFHHKA"
BASE COUNT         1076 a         1131 c         1027 g         1088 t
ORIGIN      
        1 actacgttcc atggcaggag ttcgtcaaca cggttggagg gccattccgg cagtatgctc
       61 agaatatggc gcagatacgc ttccggatcg atatcgttca gacggcaggt gcctgctttt
      121 ctggcaacaa gcaggaatct cagcgctgaa gcaggaatta gaggtaaaaa cgccctaccg
      181 ggccatgaat cacccggtca ttggagtagt aaccaaagca gatttagcca gcatggaaca
      241 aatatctttg gtgaaaagtt ggttacggga agctggagcg cacaacgtgt tagtaaccag
      301 tgcagttaat aacaatggag ttacagaact ttttgccttg ctgcatacag aagaaggctg
      361 ttgttaattt cgattggttc tcggatgaga atgatgacgg tgatacacag ataagaatca
      421 atgagcaatg agggttgccg ggcaaccctc attgaataaa acgggaatta cttcgcttcg
      481 ccgtttttca tttcgcccat agctttcagc tttttggaga tatcgcggcg ttctttggag
      541 agctcggcat ttttgatgat gtaatcgtca acgcgatctt catagtcacc tttcatgctg
      601 gcgatgatgc cctggattgc ttcaacgctc atccccggct tgatgtaatc gctcaggttg
      661 tccagcagca ggacgcgctt ctggttgtca cggatctttt tctcaacgtc ctgaatttca
      721 cgttgcagtt tgttcttacg acggaacaga cgaacaaatt ccagtacgtc ctggaatgaa
      781 ggcttggtag tttccatttt tatacccctg ataatgtgag agtcggattc gtttaagcaa
      841 ccgctattcg ttagggccaa cattactcat agctgccgca gatgacaatg cttttatccc
      901 ttttcactat catacccttt atccttgctg aatcgaagca gcagcaagat gattctgaag
      961 ttcaggaatt atttgcgcaa ggcccggcaa atcagattcg atagcaactc aagctgatgc
     1021 gccgtttcca tgttcagcca cacataacca tagattggtg tttccacaac cttcaggtca
     1081 tggtggttat tgagcaactg acgcagctct tccacagcat cgttcaattt ttccgtattg
     1141 gcaaaaaccg gctgcggatt accttcgtac agcgcatgaa caaggctcag cagtatttgc
     1201 tgcatcatgt gctgggtatc acgaagtttt tgcgcgttca ataacacgaa atggctgggg
     1261 cgcgtggccc agtatgcatt gatttgcaac tccagcatac aaaccagatt gcggttaatg
     1321 gtctggatac cttcatatat cgattttgga atacgggttt ctttgctggc gggcgcaatc
     1381 agtccacgca ttttcacggc atcggtcagg agtttttgta gatggctttc cagacgtggg
     1441 cgttcgagta agttcggtga gaatgcagat tgatagatac tgttatggcc tgcaagtttt
     1501 ttcctggtcc ggtttcccgg attgcaggca tgccagacac agcgccgtca ggcgctgttt
     1561 ttttcatccc ttccgcgatt tttacgccgc taccggatta tgccgtgacg catcgaacgg
     1621 cacgcctgac ttcagcactc catacgccac ctgtgccagc ttgcgcatca tcgcgccgag
     1681 aatcaccttt cctttcttgc cattagccgc cagacggtcg cggaacgccc gtccccactc
     1741 agtcttactg gtggctacca ttgcgggcat atacaacgcc ctgcgaagcg acacatgtcc
     1801 ggccttactc atccggctcg cccctttcac actgctacct gattcataac gccgtggtgt
     1861 cagacccgca aaagcggcga actgtctggc atgggcgaag cggtccttca gaccgatata
     1921 agccagcaat accgcagatg ttttctctcc gatacccggg atgctttcca gcagtttcct
     1981 gcggtgtttc atatccggat catcgtctgt caggtctttt atctgcttct caagacgctt
     2041 cagctctgct tcaagccaca gaaggtgagc atcaatgctc ggtctctgga cttcccgcgc
     2101 cgtttcagtg cgattcagtt cctgcgtgtg catatctgtc agcgcctggt ggcggactac
     2161 cagggcacgc aacgcgcgtt caagcgggtg aggcgcttcc caggctgcag ggcgcttctg
     2221 acgacagaac tctgccagca tgcgcgcatc cacggtatca gtcttgttac gcagtccttc
     2281 actctgagcg aaagctttac ccagcgcagg attaatgact gacactatgt agccagcatc
     2341 gtaaaggcac tcagcgacag gtttcatata ggtgccggtc gcttcgatgc agatatgcgc
     2401 atggtcaatc ttgtgacctt tcagccagct caccagctca tcgtgccctt tagtggtgtt
     2461 agcgaatttt ttggtgcgat gacgaccatc aggacgcaac acatcgacat ccagtttctc
     2521 tttagcggtg tcgataccga tataatgaag ttcatgttcc atagtgaaac caaccttgca
     2581 aatacggatt accgggaaaa ccggtccatg atactgtccg gtttatcact ttgggagaaa
     2641 ggcagtccgc tgcataaatc tacgcaacag gttagaaccc aaggcccgat acggcatgcg
     2701 gactgcaggc agagaaaact ggccgatttt ctctgcactg gagggataat acaagacccg
     2761 attatactcg gtcagacttt tcgccagttg aatgcgccag tggatgaacg cccgttgtgg
     2821 ccagataccg gtaaacaaca ttgccagtaa agagccgagg atcacatcgc cgcttcgcca
     2881 taacgccgta tcaatttcac ctgtcgggga acccacaaca attgccagcg tcaccccaat
     2941 caataaacct tgatacggtt tcttgcccag cgccagccaa ccgcaaagga acatggccgc
     3001 cgcgcaccag actaacatca gcggtaacga gattaactcc agttgcagag cgataagacc
     3061 taaaatcgaa cccaacaccg taccgccaat acgctcaaag gcgcgaggga caacgttacc
     3121 ccagaacgag attggcccca taatcaccac catggtgacc agcggccagg tgctttccgg
     3181 gatagtaaac aggcggataa tgagaaaagt gagcaggaat gccagcgcga cccgagtacc
     3241 atgcacaatg cggtaatggc ggtatacccg gatttcaaac gggcttaatg acttatcggc
     3301 acgcacgcag aaactccgta atgagattaa aagcgctcat aactcatctg tcggccagaa
     3361 ggcgcgcctc tgaattatcc gacggacaaa ccgggaacag tgtaatttcc cggcaggagc
     3421 gaaaaaattg aaaggcgcat cttactcttt tcgctttcaa aaaaaagagt ggtcatcgcg
     3481 ttaacacacc gccctgagat gaattagtga tgttttggct gcaccgcaac atacatttcg
     3541 atatcccagt acccatcttc cgcgccattg ttcaaataaa cctcgaagca gggctttggt
     3601 aacatttcat aagcactgtc ctgcaagaga ctattaaaga actgatacca gggtttagca
     3661 aaatcatcac cgactacacg agctaccgcc accgcatact gaccacctgt aatttctgtc
     3721 agaatgacgc cctcactgtt ttcgggaagc gtaaagtaac ccggcaccgt cacgacggtg
     3781 tcgcagcgta atttttcggc gggtgtttca tctggattgt cgtaatagac agcaacccac
     3841 tccttcggca caatattttt gctatctacc cacatcatca actgctcaaa gcctttcttt
     3901 accgtctgtt cccacgggcc aacgagatgg aaacctgcaa cggtacgttt ctcttcctgc
     3961 ttaatctcgt agttcatgac gcctccattg atactgtttt tatatacagt atagttgcaa
     4021 aattaaaacc acaaggaatg agtgttgatt atgcgagcag actcgcactc ctgccagtct
     4081 gctgcaaaag aaaggtcagg ccttatggtg gaaataatca ctcaggcgag aaaacatgct
     4141 gccttccccg acagattcca gggtaaccag cggccagtgc gccacctgtt tatcacggtc
     4201 gtaaagttca atttccccta cccgctgatg ggcgctaatt ggcgcggtga gttctttacc
     4261 atcaagggta tatttggctt tgatatgtgg aatttcggct ttcggtagca ccatccagaa
     4321 ct
//
LOCUS       DADMHC010000251         4292 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.254, whole genome shotgun sequence.
ACCESSION   DADMHC010000251 DADMHC010000000
VERSION     DADMHC010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4292)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4292)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4292
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.254"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(947..1606)
                     /locus_tag="JNZ57_003768"
     CDS             complement(947..1606)
                     /locus_tag="JNZ57_003768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000852869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4145 domain-containing protein"
                     /protein_id="HAY8829812.1"
                     /translation="MAEYYPAVFEAEAFNCPHCGVYARQFWRSMYGNSNVLAVKSTEF
                     RMSTCSHCGEDAYWYQGNMLIPAAGNVELPNPDMPDDCKSDYMEARSIINLSPKGAAA
                     LLRLCLQKLMVHLGEPGNNINADIRSLVQKGLPVRIQQAADICRIVGNQAVHPGEISL
                     DDDPQLAHGLFKLLNIIVTEQITRPKEIEAMFQSMPEGPRQGIENQDRQAREQQQAAN
                     E"
     gene            complement(1599..3206)
                     /locus_tag="JNZ57_003769"
     CDS             complement(1599..3206)
                     /locus_tag="JNZ57_003769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005070752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HAY8829813.1"
                     /translation="MLNSRTYLYQRNGVFYIRLRMKSTGRLTASLPSHNRYKLASVSL
                     RTKDRRTAMAHSRHIKSALKAIHADNPNASYEELREHLKTIVEWELSVSRDDLNDPES
                     YQLYVDQYDDIKSNLREAVATERLTVDQHRYINDVIGVLKACQDRLRGDSSGLLSYLE
                     PETSSLRPSVSLSVLADPEVPEPKALTLASLIEQYEQENAQNWKPATLSENRASHSTL
                     IEIFDYLDIQDVGKATRSDMLRVREVLQQIPKNRKQRFKSMPLSDLLNRESKTDCLDV
                     VTINNKYLIKMAAVFKWAVRNDLIAKNLTEGLELKVPQRKASDARDAFSPEQVGQLLV
                     AAKAYSQKTAGKPYHYYVTALAAITGARLNEVAQLQVKDVRVTEAGTVYIHINEDDSS
                     LPGKSVKNAHSDRCVPLVDGAYGFVLADFVSLVEDRRKAEGDNAMVFDGLKLMKNGYG
                     EQVSKWFNRTLLPKVLADRSGLAFHSFRHTVATQLKQHGVELAYAQAIMGHSSGSITY
                     DRYAKEVEVDRLVNVMAGVYKETGVNG"
     gene            complement(3341..3414)
                     /locus_tag="JNZ57_003770"
     tRNA            complement(3341..3414)
                     /locus_tag="JNZ57_003770"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3380..3382),aa:Gly,seq:ccc)
     gene            complement(3493..4248)
                     /locus_tag="JNZ57_003771"
     CDS             complement(3493..4248)
                     /locus_tag="JNZ57_003771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311765.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HAY8829814.1"
                     /translation="MSAGRLNKKSLGIVMLLSVGLLLAGCSGSKSSDTGTYSGSVYTV
                     KRGDTLYRISRTTGTSVKELARLNGISPPYTIEVGQKLKLGGAKSSSSTRKSTAKSTT
                     KTASVTPSSAVPKSSWPPVGQRCWLWPTTGKVIMPYSTADGGNKGIDISAPRGTPIYA
                     AGAGKVVYVGNQLRGYGNLIMIKHSEDYITAYAHNDTMLVNNGQSVKAGQKIATMGST
                     DAASVRLHFQIRYRATAIDPLRYLPPQGSKPKC"
BASE COUNT         1022 a         1090 c         1057 g         1123 t
ORIGIN      
        1 taatgacgct gatttcttgt tgggtcattt acgtgtactc cttttgtttg caccctgaag
       61 tcgcacccca ctgacctact caagccccca cgtaaaggga gaccagcagg caacaggacg
      121 caaacagaat gacttgaggt aattggggtt agtggtctgc gatgaccata gagatgaagg
      181 ttcgacagca tgtccgagcg tgtgtggtga tagacttaag tcacgagacc aaagaacaca
      241 caggctgacc agaggctgtc ttgccttagg ctggtggcta gcttgctagc gtggaccacg
      301 gtttctcgct tgccgtctct caggaggtca gaggcgagat atggtcccta tagtgatagt
      361 ttagtcaaac aggaatgaac ttcggagaac ttgacgcgaa agtgttcagt acttccagta
      421 agacccgaag catggagacc acatcatagc gaccatagtt tacttcgggt tggcgggagt
      481 ggaggctgga cttaaagttc ttcttattgg aattgtgata acacaatcca taacaagata
      541 aactcatggt ctcctccagc ctgctggtca ggactcaaag tccgacctca gacaccacta
      601 ctggtctaac ctctttgagt ttccgcctgt ccacaatgga tggcagacct cagcaatgat
      661 gtcttggttc ttcacaatct cgcacaccga tggtctcata gacggaagtt ccgctgaggt
      721 ctgatgttct ccgcctgtca aaggagagag attgctacgt taaagggaat ggtctcaggc
      781 caaggtgatt taacactagg cttattgcgg atggtttcca atcggtccgc taccggaagc
      841 ctgagattta atgaatgtgt gggtcggtgg ctgtattaag ccggggggac ttagggtctc
      901 tccctatagt gatagtttag tcccccttcc ccctatagtg tgggttttat tcattagcag
      961 cctgctgctg ttccctcgcc tgtctgtcct gattctcaat accttggcgt ggaccttcag
     1021 gcatactctg gaacatagcc tcaatttctt tcggtctggt aatctgctca gtgacaataa
     1081 tgttcaacag cttaaagaga ccatgtgcca actgtgggtc gtcatcaagg ctaatctctc
     1141 ctggatggac cgcctgattg ccaacgatac gacagatgtc tgctgcctgc tgaatgcgta
     1201 caggtagtcc tttctggacg agtgaccgaa tgtcagcatt aatgttgttt cccggttcgc
     1261 ctaagtggac cattagcttt tggaggcaaa gacgaaggag tgctgctgcg cctttaggag
     1321 acagattaat gatgcttcta gcttccatat agtctgactt gcagtcatcg ggcatgtctg
     1381 ggtttgggag ttcaacattg ccagccgcag ggatcaacat gttgccctga taccaatagg
     1441 catcttcacc acaatgagag catgttgaca ttcggaactc agttgatttg accgcaagca
     1501 cattcgaatt accatacata ctacgccaga actgacgggc atatacaccg cagtgagggc
     1561 aattaaaagc ttctgcttca aacaccgccg gataatactc agccatttac tccagtctcc
     1621 ttataaacac cagccatcac attaaccaat ctatctacct caacctcttt cgcgtaacgg
     1681 tcgtaagtta tggacccgct cgaatggccc ataatcgcct gagcatacgc taactcgacc
     1741 ccatgttgtt ttaactgggt cgcaacagta tgtctaaacg agtgaaacgc taagccgcta
     1801 cggtcagcaa ggactttagg tagcaacgtt cggttaaacc atttgctcac ctgctcaccg
     1861 tagccgttct tcatcagctt gaggccatcg aataccatag cattatcacc ctcagccttt
     1921 ctacggtctt ccacaagcga cacaaagtca gccaatacaa aaccataagc gccatcgacc
     1981 agcgggacac agcggtcgct atgcgcattc ttaacgctct tacccggcag gctgctatcg
     2041 tcttcgttaa tgtggatata cacggtcccg gcctcagtga ccctgacgtc tttgacctga
     2101 agttgggcca cctcgttaag tcttgctcca gtgatcgcag ccagagcggt gacgtaataa
     2161 tggtatggct tacctgcggt cttctgagag tacgctttag cggcgaccag tagttgccct
     2221 acctgctcag gactgaacgc atcacgagcg tcggaggctt tacgctgcgg gactttcagc
     2281 tcaagacctt cggtcaggtt cttagctatc aagtcgttgc gtaccgccca cttaaacaca
     2341 gcagccatct tgataagata tttattgttg atggtaacga catccaaaca gtcagtctta
     2401 gactcccggt tcagcaggtc agacagcggc atagacttaa agcgttgctt gcggttcttc
     2461 ggtatctgct ggaggacttc acggaccctg agcatatctg aacgggtcgc cttgccgaca
     2521 tcctgaatat ccagatagtc gaatatctcg attagcgtgg agtgcgacgc tcggttctcg
     2581 cttagggtcg ctggcttcca gttctgggcg ttctcctgct cgtactgctc aatgagagac
     2641 gcgagggtaa gagctttagg ttcggggact tcaggatctg ccaatacaga tagggagacg
     2701 gacggtctta gactactggt ctcaggctca aggtaagaca acaggccaga gctatcaccc
     2761 ctgagtctgt cctgacaggc cttaagcaca ccgataacgt cattgatata gcgatgctgg
     2821 tctacagtca gacgctcagt cgctacagct tcccgaaggt tggacttaat gtcatcgtac
     2881 tggtcaacgt aaagctggta ggactctggg tcgttcaggt catcacggct gacactaagc
     2941 tcccactcga caatggtctt caggtgctcc cgtagctcct cataagaggc gttagggtta
     3001 tctgcgtgga ttgctttaag tgctgacttg atgtgccgtg agtgagccat agcggtgcgt
     3061 ctgtccttag tccgtagtga tactgacgct agtttataac ggttatgaga gggaagcgaa
     3121 gcggtcaggc gaccagtgct cttcattcta agacggatgt aaaagacacc gttacgctga
     3181 taaaggtagg ttcttgagtt gagcatgtac tgagacctta ggtctgctca ctacttcaac
     3241 aaagttagtc acagtgttgg ttacagtgag taaaactctc ggaaggcttt aagccgtatc
     3301 ccttaggatt cagtaagtta ttgaacttta agaagtgtca tggagcgggc gaagggaatc
     3361 gaaccctcgt atagagcttg ggaagctctc gttctaccat tgaactacgc ccgcttcgag
     3421 atgcgtaagg cattataaac cttacgctct ccttagcaag tgccgcgctg ctgactgctg
     3481 attaattcgc catcagcatt ttggcttgct gccctgcggc ggcaagtaac gtagcggatc
     3541 aattgccgtt gctcggtaac gaatctggaa atgcaggcga acagatgccg catccgtgct
     3601 ccccatagtg gcgatttttt gcccagcctt cacgctttgc ccattattta ccagcatcgt
     3661 gtcattatgg gcgtaagccg taatgtaatc ttcactgtgt ttaatcatga tgagattacc
     3721 gtagccacgc agctggttgc ccacatacac cacctttcct gcacccgcgg cgtaaatagg
     3781 tgtaccccgt ggagctgaga tatcaatccc tttattgccg ccatctgctg tcgaatacgg
     3841 catgataact ttccctgtcg ttggccataa ccaacaacgt tgccctactg gcggccagga
     3901 agatttcggt accgctgatg acggtgtaac cgatgcggtt ttggtcgttg atttggcggt
     3961 tgatttacgt gtactactgc tacttttcgc cccacccagt tttagtttct gaccaacttc
     4021 aatggtgtaa gggggggaaa tgccgttcag tcgcgccagt tcttttacgc tggttcccgt
     4081 ggtgcgcgaa atacgatata gcgtatcccc ccgtttcacg gtgtaaacgg agccggaata
     4141 cgttcctgta tcggatgatt tgctacccga acagcccgcc aaaagcagtc caaccgataa
     4201 caacatcacg atacccagag attttttatt caggcgtccc gcactcaaaa tctttcctcg
     4261 cttaaaaaac aagacgcctt atcatagcag cc
//
LOCUS       DADMHC010000252         4283 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.255, whole genome shotgun sequence.
ACCESSION   DADMHC010000252 DADMHC010000000
VERSION     DADMHC010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4283)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4283)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4283
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.255"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..309)
                     /locus_tag="JNZ57_003772"
     CDS             complement(<1..309)
                     /locus_tag="JNZ57_003772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HAY8829815.1"
                     /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA
                     RAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGA
                     I"
     gene            complement(424..499)
                     /locus_tag="JNZ57_003773"
     tRNA            complement(424..499)
                     /locus_tag="JNZ57_003773"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(464..466),aa:Thr,seq:ggt)
     gene            complement(506..580)
                     /locus_tag="JNZ57_003774"
     tRNA            complement(506..580)
                     /locus_tag="JNZ57_003774"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(545..547),aa:Gly,seq:tcc)
     gene            complement(697..781)
                     /locus_tag="JNZ57_003775"
     tRNA            complement(697..781)
                     /locus_tag="JNZ57_003775"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(745..747),aa:Tyr,seq:gta)
     gene            complement(790..865)
                     /locus_tag="JNZ57_003776"
     tRNA            complement(790..865)
                     /locus_tag="JNZ57_003776"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(830..832),aa:Thr,seq:tgt)
     gene            1227..2177
                     /gene="coaA"
                     /locus_tag="JNZ57_003777"
                     /gene_synonym="panK"
     CDS             1227..2177
                     /gene="coaA"
                     /locus_tag="JNZ57_003777"
                     /gene_synonym="panK"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HAY8829816.1"
                     /translation="MSIKEQTLMTPYLQFDRNQWAAQRDSVPMTLSEDEIARLKGINE
                     DLSLEEVAEIYLPLSRLLNFYISSNLRRQAVLEQFLGTNGQRIPYIISIAGSVAVGKS
                     TTARVLQALLSRWPEHRRVELITTDGFLHPNQVLKERGLMKKKGFPESYDMHRLVKFV
                     SDLKSGVPNVTAPVYSHLIYDVIPDGDKTVVQPDILILEGLNVLQSGMDYPHDPHHVF
                     VSDFVDFSIYVDAPEDLLQTWYINRFLKFREGAFTDPDSYFHNYAKLTKEEAIKTAMT
                     LWKEINWLNLKQNILPTRERASLILTKSANHAVEEVRLRK"
     gene            complement(2206..3171)
                     /gene="birA"
                     /locus_tag="JNZ57_003778"
     CDS             complement(2206..3171)
                     /gene="birA"
                     /locus_tag="JNZ57_003778"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/biotin operon repressor BirA"
                     /protein_id="HAY8829817.1"
                     /translation="MKDNTVPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLR
                     DWGVDVFTVPGKGYSLPEPIQLLNAEQILGQLDGGSVAVLPVIDSTNQYLLDRIGELK
                     SGDACVAEYQQAGRGRRGRKWFSPFGANLYLSMFWRLEQGPAAAIGLSLVIGIVMAEV
                     LRKLGADKVRVKWPNDLYLQDRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEESV
                     VNQGWITLQEAGINLDRNTLAAMLIRELRAALELFEQEGLAPYLSRWEKLDNFINRPV
                     KLIIGDKEIFGISRGIDKQGALLLEQDGIIKPWMGGEISLRSAEK"
     gene            complement(3168..4196)
                     /gene="murB"
                     /locus_tag="JNZ57_003779"
     CDS             complement(3168..4196)
                     /gene="murB"
                     /locus_tag="JNZ57_003779"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HAY8829818.1"
                     /translation="MNHSLKPWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVL
                     ILGEGSNVLFLEDYRGTVIINRIKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGMP
                     GLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDCVELATGKQVRLTAKECRFGYRD
                     SIFKHEYQDRFAIVAVGLRLLKEWQPVLTYGDLTRLDPTTVTPQQVFNAVCHMRTTKL
                     PDPKVNGNAGSFFKNPVVSAETAKALLAQFPTAPNYPQAGGSVKLAAGWLIDQCQLKG
                     MQMGGAAVHRQQALVLINEDNAKSEDVVQLAHHVRQKVGEKFNVWLEPEVRFIGASGE
                     VSAVETIS"
BASE COUNT         1094 a         1067 c          967 g         1155 t
ORIGIN      
        1 gatcgcgccg tccatctgag cagcaccggt gatcatgttt ttaacatagt cggcgtgccc
       61 cgggcagtct acgtgtgcgt agtgacgggt cggggtgtcg tattcaacgt gagaagtgtt
      121 gatggtgata ccacgagctt tttcttccgg cgcgttatcg atctggtcga atgcgcgagc
      181 agcaccgccg taggttttag ccagtacggt agtgattgca gcggtcagcg ttgttttacc
      241 atggtcaacg tggccgatag taccgacgtt aacgtgcggt tttgtacgtt caaacttttc
      301 tttagacatc gattgtccct ctaagacacg gataaatcgg tgatatcacc acatcaacca
      361 ggcaacatgc ccgacttgtt gaatgcaata aacagaagga aaaaacaggg aggagaaaag
      421 aagtggtgct gataggcaga ttcgaactgc cgacctcacc cttaccaagg gtgcgctcta
      481 ccaactgagc tatatcagca catcttggag cgggcagcgg gaatcgaacc cgcatcatca
      541 gcttggaagg ctgaggtaat agccattata cgatgcccgc atcctggaac tcggctacct
      601 gattttcatt ctgcactgaa tatcgagaga agctctcttt attcgagccg gtaagcgaac
      661 ttatcgtctc gggctacgcc atcgcgtggc cgaaattggt ggtgggggaa ggattcgaac
      721 cttcgaagtc tgtgacggca gatttacagt ctgctccctt tggccgctcg ggaaccccac
      781 cggacttgat ggtgccgact accggaatcg aactggtgac ctactgatta caagtcagtt
      841 gctctaccta ctgagctaag tcggcatcaa gtagcgcgca ttctatggag acatgcgagt
      901 tcatgcaact aaaaaattgc ataatttgtt ttattggtca cattttatgc aacacgatga
      961 agaaacagcc gaatggaggg cagattagca cactttttca acatcattgt gctcaacaat
     1021 gcgctcctgc taaaccataa ttcttcttat cagatggaat atctgtcaca ttgcttttca
     1081 acgatagctt cctgggagag attttttctt attattcctc cccatctggt gttaccctcc
     1141 tgcccattaa cccattcaac agaactgtga cgcgccatgg caaatatcgc tttgccgata
     1201 gagctatgac cgccagaaac atgcttatga gtataaaaga gcaaacgtta atgacgcctt
     1261 acctacagtt tgaccgcaac cagtgggcag ctcagcgtga ttccgtacct atgacgttat
     1321 cggaagatga gatcgcccgt ctcaaaggta ttaatgaaga tctctcgtta gaagaagttg
     1381 ccgagatcta tttacctctg tcacgtttgc tgaacttcta tataagctcg aatctgcgcc
     1441 gtcaggcagt tctggaacag tttcttggta ccaacgggca acgcattcct tacattatca
     1501 gtattgctgg tagtgtcgcg gtggggaaaa gtacaaccgc ccgtgtattg caggcgctat
     1561 taagccgttg gccggaacat cgtcgtgttg aactgatcac tacagatggc ttccttcacc
     1621 ctaatcaggt tctgaaagaa cgtggtctga tgaagaagaa aggcttcccg gaatcgtatg
     1681 atatgcatcg cctggtgaag tttgtttccg atctcaagtc cggcgtgcca aacgttacag
     1741 cccctgttta ctcgcatctt atttatgatg tgatcccgga tggagataaa actgttgttc
     1801 agcctgatat tttaattctt gaagggttaa atgtcttaca gagcggaatg gattatccac
     1861 acgatccaca tcatgtattt gtttctgatt ttgtcgattt ttcgatatat gttgatgcac
     1921 cggaagactt acttcagacg tggtatatca accgtttcct gaaattccgc gaaggggctt
     1981 ttaccgaccc ggattcctat tttcataact acgcgaaatt aactaaagaa gaagcgatta
     2041 agactgccat gacattgtgg aaagagatca actggctgaa cttaaagcaa aatattctac
     2101 ctactcgtga gcgcgccagt ttaatcctga cgaaaagtgc taatcatgcg gtagaagagg
     2161 tcagactacg caaataattt gcaggggagc gaatactccc ctttcttatt tttctgcact
     2221 acgcagggat atttcaccgc ccatccaggg ttttattatt ccatcctgct caagtaataa
     2281 agccccctgt ttgtctattc cgcgtgaaat gccaaatatt tctttatcac caatgataag
     2341 tttcactggg cgattaataa aattatccag cttttcccag cgcgacagat aaggtgccaa
     2401 tccttcttgt tcgaagagtt ccaacgcagc acgtaattca cgtattagca tggccgccaa
     2461 cgtattacga tcgagattga tccccgcttc ctgcagcgtg atccacccct gattaacgac
     2521 actctcttca acacggcgca ttgccatgtt gatcccggct ccaatgacta tttgcgccgc
     2581 atcgccagtt ttgccagtca gctccacaag aatgcctgcc agcttgcgat cctgcagata
     2641 gaggtcatta ggccatttga cacgaacttt atctgctccc agcttgcgta atacttccgc
     2701 catcacgata ccgataacca gacttaaacc aatcgccgcc gccgggcctt gttccagacg
     2761 ccagaacatc gacaaatata agtttgcgcc aaaaggcgaa aaccatttcc gcccccggcg
     2821 accacggcca gcctgctggt attctgcaac acaggcatcg cccgatttaa gctctccgat
     2881 acgatcaaga aggtactgat tcgtggagtc aataactggc agcacggcta cactaccgcc
     2941 atccagctga cccaatatct gttcagcatt aagtaactgg atgggctcag gcaggctgta
     3001 tcctttaccc ggaacggtaa agacatcaac gccccagtca cgcagtgtct gaatgtgttt
     3061 attaatagcc gcccggctca ttcccagcgt ttcacccaac tgctcgccag agtgaaattc
     3121 accgttcgct aacagggcaa tcaatttcag tggcacggtg ttatccttca tgaaattgtc
     3181 tccactgcgc tcacttcacc tgatgcacca ataaagcgga cttcaggctc aagccagaca
     3241 ttaaattttt cacccacttt ttgtcttaca tggtgtgcca gttgcaccac atcttcgctt
     3301 tttgcattgt cttcattaat gagaactaac gcctgttgac ggtgcaccgc agccccaccc
     3361 atttgcatcc cttttagctg gcactgatca ataagccaac ctgctgccag ttttactgaa
     3421 ccacccgcct gggggtaatt tggtgctgtt ggaaattgcg ccagtaatgc tttagccgtt
     3481 tcggcagata caacagggtt tttgaagaaa ctaccggcat tgccattcac ttttggatca
     3541 gggagtttgg tggtgcgcat atgacacacc gcattaaata cttgctgtgg cgttactgtt
     3601 gtaggatcca gacgagttaa gtcaccatac gttagtacag gttgccactc ttttagcaga
     3661 cgcagaccta cggctacaat ggcgaagcga tcctggtatt catgtttaaa aatactgtcg
     3721 cgatagccaa aacggcactc tttggcagtt aagcgcactt gcttacctgt cgccagttca
     3781 acacaatcaa cataagcgca aactcgctgt aattctacgc cataagcacc aatattctgg
     3841 ataggtgatg agccgacaca accaggaatt aatgccagat tttccagacc aggcatacct
     3901 tcctgcaaag tgtattttac caggcgatgc cagttttctc cggctcctac atgtaaatac
     3961 cacgcatcag gttcatcatg aatttcgata cctttgatcc ggttgatgat caccgtgccg
     4021 cgatagtctt ccagaaaaag tacattactt ccttcaccca gaataagaac gggttgtcct
     4081 tctgcggttg catactgcca ggcattgagt aattgttgtt cgtcttcggc acatacaatg
     4141 tgctgagcat tatgatcaat gccaaatgtg ttccagggtt ttaaggagtg gttcatagct
     4201 gctttcctga tgcaaaaacg aggctagttt accgtatctg tggggggatg gcttgtagtt
     4261 atgacgacag ggagagtttg tag
//
LOCUS       DADMHC010000253         4203 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.256, whole genome shotgun sequence.
ACCESSION   DADMHC010000253 DADMHC010000000
VERSION     DADMHC010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4203
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.256"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            112..615
                     /gene="yeaK"
                     /locus_tag="JNZ57_003780"
     CDS             112..615
                     /gene="yeaK"
                     /locus_tag="JNZ57_003780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mischarged aminoacyl-tRNA deacylase"
                     /protein_id="HAY8829819.1"
                     /translation="MTEMAKGSVTHQRLIALLSQEGANFRVVTHEAVGKCEAVSEIRG
                     TALGQGAKALVCKVKGNGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDEL
                     TGCVFGAIPPFSFHPKLKLVADPLLFERFDEIAFNAGMLDKSVILKTTDYLRIAQPEL
                     VNFRRTA"
     gene            complement(616..720)
                     /locus_tag="JNZ57_003781"
     CDS             complement(616..720)
                     /locus_tag="JNZ57_003781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416302.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829820.1"
                     /translation="MNDQMFVETLIITSSFFAIAVVLVLSVLLIERTG"
     gene            889..1335
                     /locus_tag="JNZ57_003782"
     CDS             889..1335
                     /locus_tag="JNZ57_003782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HAY8829821.1"
                     /translation="MFDVTLLILLGLAALGFISHNTTVAVSILVLIIVRVTPLSTFFP
                     WIEQQGLSIGIIILTIGVMAPIASGTLPPSTLIHSFLNWKSLVAIAVGVIVSWLGGRG
                     VTLMGSQPQLVAGLLVGTVLGVALFRGVPVGPLIAAGLVSLIVGKQ"
     gene            complement(1292..2113)
                     /locus_tag="JNZ57_003783"
                     /pseudo
     CDS             complement(1292..2113)
                     /locus_tag="JNZ57_003783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416304.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
     gene            2210..3406
                     /gene="nimT"
                     /locus_tag="JNZ57_003784"
     CDS             2210..3406
                     /gene="nimT"
                     /locus_tag="JNZ57_003784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005117270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-nitroimidazole transporter"
                     /protein_id="HAY8829822.1"
                     /translation="MTCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAY
                     SLTTAQTGLLTTLPLLAFALISPLAAPVARRFGMERSLFAALLLICAGIAIRSLPSPY
                     LLFGGTAVIGGGIALGNVLLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVMPLA
                     LNGFGWQGALLMLMCFPLLALFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTL
                     FLGSNSLVYYVIIGWLPAILISHGYSEAQAGSLHGLLQLATAAPGLLIPLFLHHVKDQ
                     RGIAAFVALMCAVGAVGLCFMPAHAITWTLLFGFGSGATMILGLTFIGLRASSAHQAA
                     ALSGMAQSVGYLLAACGPPLMGKIHDANGNWSVPLMGVAILSLLMAIFGLCAGRDKEI
                     RSYPVL"
     gene            3446..3793
                     /locus_tag="JNZ57_003785"
     CDS             3446..3793
                     /locus_tag="JNZ57_003785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310528.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HAY8829823.1"
                     /translation="MNIQCKRVYDPAEQSDGYRVLVDRLWPRGIKKTDLALDEWDKEI
                     TPSTELRKAFHGEVVDFTTFREQYLAELAQHEQEGKRLADIAKKQPLTLLYAAKNTTQ
                     NHALVLADWLRSL"
     gene            complement(3815..4069)
                     /gene="yoaF"
                     /locus_tag="JNZ57_003786"
     CDS             complement(3815..4069)
                     /gene="yoaF"
                     /locus_tag="JNZ57_003786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing lipoprotein YoaF"
                     /protein_id="HAY8829824.1"
                     /translation="MKIISFVLPCLLVLAGCSTPSQPEAPKPPQIGMANPASVYCQQK
                     GGTLIPVSTAQGVSNNCKLPGGETIDEWALWRRDHPAGEK"
BASE COUNT          968 a         1065 c         1040 g         1130 t
ORIGIN      
        1 catgatgcgt ataaagcttc cgatgagcgt ttatatgtca ataagcagaa caaaaacagc
       61 cgttcatgat aaccttctgt ggttgtttgc ttgtaatctc aggagcgtga aatgactgaa
      121 atggctaaag gaagcgtgac gcatcagcgg ttaatcgctt tattatcaca agaaggtgct
      181 aacttccgcg tcgttaccca tgaagcggta ggtaaatgtg aagcggtgtc agaaattcgt
      241 ggcaccgctt taggccaggg agctaaggca ctggtatgta aagtcaaagg caatggcgta
      301 aatcaacatg ttctggcgat cctcgctgcc gatcaacagg ccgatctgag ccaacttgcc
      361 agccatatag gcggattacg cgcttcgtta gccagccctg ctgaagtcga tgaactcaca
      421 ggctgtgtct tcggcgcgat cccccctttc agcttccatc caaaactcaa actggttgcc
      481 gaccctctac tcttcgaacg atttgatgaa atcgccttca atgcagggat gctggataaa
      541 tccgttattt tgaaaaccac ggattatttg cgcattgcgc aaccagaact ggtcaatttc
      601 cgccgcactg cgtaactagc ctgtccgttc aataagcaga acggacaaaa ccagcacaac
      661 agcaatggca aaaaacgatg acgtgataat cagtgtctcg acgaacattt gatcgttcat
      721 agcatgcccc cgggagatag ctgttttcac gttattgtta gcgtgcacaa atggcagttt
      781 gatgacagtt cgcctgattt ttatgcaaaa aacgtaaaga ttttctactt ccttcctgca
      841 gcaagcgtaa agtaagcagg cttattattt tttggcaagg aaaccacgat gtttgatgtc
      901 actttgctga tcctgctcgg gttagctgcg ctgggcttta tcagtcataa caccactgtc
      961 gccgtttcaa ttctggtgtt gatcattgtc cgcgtcacac cgttaagcac ctttttcccg
     1021 tggattgaac aacaggggct aagtatcggg ataatcattc tgacgattgg cgttatggcc
     1081 cccatcgcca gcgggacgct accgccctca accttgattc actcgtttct gaactggaaa
     1141 tcgctggtag caattgcagt aggcgtgatt gtctcctggc tgggtgggcg cggcgtgacc
     1201 ttaatgggca gccagccgca actggtcgcc gggctgctgg taggcactgt tttaggcgtg
     1261 gcgctgtttc gcggcgtacc ggtcggcccg cttattgccg cgggtctggt ttcgctgatt
     1321 gtggggaaac agtagttaat cccgcaatat atcggcctgg cgtttgcccc aggcctttct
     1381 taaacatagt aataaaggcc gttgttgaat cataccccag cgtatgagca actttctgta
     1441 cagtatcgcc tttcactaat ccctgaagtg ccataatcag ctgtaactgc tgacgtcact
     1501 ggcgaaaact caaccccgtc tcttttacta tcagtcgcgc aagattgcgt tcactcatcg
     1561 caaaaaagcc agcccattgc cctaatgacc cccactcgac gggccctttc gccatcatct
     1621 ccaccatcgt gcggatttta ggatgagaag aaacgggcag gtgcagctgt tgttgtggct
     1681 gctgagggag ttcatcaaac aggacctgta ttaatctgcg ggtcatcggc tcagcacgct
     1741 gagtcgtcgt cctgtttgcc agggttaaaa tcaattcccg gcataagggc gatattttca
     1801 atgtgcaaca tgttgtcggc attgtcactg cgctgggttc gataaacaga aaacagagtt
     1861 cagcgttagc tgtcacttga ttgctatgtt ccaccccgcc cggtatccaa accgcatatt
     1921 gcggcggcac catccacaaa gcattttcca ccgtacaggt aattgcacca tgtaatgcta
     1981 gtatcagctg tcctttgcgg tgctgatgta caggactggt taactcatcc gttccggcgt
     2041 gaatacaaaa tgcgaccgcg gcttcatggt gtcggtcggg ttcatagcca ttgagattca
     2101 acctgtgcat cattttgtcc gaatttagcg ataatttgtc attttagctt gattcaacat
     2161 aacaataaaa acggtaaggt acagcctcgt ttgtaacaat gagaagcata tgacctgttc
     2221 aacttcatta agcggcaaaa acaggattgt ccttatcgct ggcattctga tgattgccac
     2281 aacattacgc gtcaccttta ccggcgcagc accgttactg gatacgattc gttccgctta
     2341 ctcgctgacg acagcgcaaa ccggcttatt gaccaccctg ccattattgg cctttgcgct
     2401 aatctcacct ttggccgccc cggtagcgcg acgttttggt atggaacgta gcctgtttgc
     2461 cgcgttactt ttgatctgtg ctggtatcgc aattcgctct ctcccttcgc cttacttatt
     2521 atttggcggt acagcggtca ttggcggtgg gattgcatta ggcaatgtct tactgccagg
     2581 attaattaaa cgcgatttcc ctcattccgt cgccagactt accggcgcat attccctgac
     2641 aatgggagct gcggcggcac ttggatcggc tatggtaatg ccgctggctt tgaacggttt
     2701 tggctggcaa ggcgcgttgc tcatgctgat gtgttttcct ctgctggctc tttttttatg
     2761 gctgccacag tggcgaagcc aacaacatgc aaatttgagt acctcgcgcg ccttacatac
     2821 tcggggtatc tggcgttcgc cgcttgcctg gcaggtcaca ttgtttcttg ggagcaactc
     2881 actggtctat tacgtgatta ttggctggct tccggcgatc ctcatcagtc acggctatag
     2941 cgaagcacag gcgggttcac tgcatggttt gctgcaacta gccacagcag ctcccggttt
     3001 gctgatccct cttttcttac atcatgtgaa agaccagcgt ggtattgcag cgttcgttgc
     3061 cttgatgtgc gcagtgggcg ctgttgggct ctgctttatg ccagcgcacg cgatcacctg
     3121 gactctgctt ttcggttttg gttccggcgc aacaatgata ctggggttga cgttcattgg
     3181 tcttcgggca agttctgcgc atcaggcggc ggcactctcg gggatggcac aatccgtcgg
     3241 gtatttgctg gcagcctgtg ggccgccgct aatgggtaaa atacacgatg ctaacggtaa
     3301 ctggtccgta ccactgatgg gtgttgcaat actttcacta ctgatggcga ttttcggact
     3361 ttgcgccggg agagacaaag aaattcgctc atatccggtg ctatagtgac gtgacaaatc
     3421 atgcgtgaaa gggagaacaa acacgatgaa tattcagtgc aaacgcgttt atgatccggc
     3481 tgaacagagc gatggttatc gcgtactggt cgaccgcctc tggccgcgcg gtatcaaaaa
     3541 aaccgattta gcccttgatg agtgggataa agaaatcacg ccgtcaacgg aactgcgcaa
     3601 agcctttcac ggcgaagtcg tcgattttac aacctttcgc gagcaatatc ttgcagaact
     3661 ggcgcaacac gagcaagaag gaaagcggct ggcggacatc gccaaaaaac agccgctgac
     3721 cctgctctac gcagcaaaaa acaccacgca gaaccatgcg ctggtgctgg ccgactggct
     3781 acgtagcttg tgattttagt acagcatccg gcggttattt ttcaccagcc ggatggtccc
     3841 gtcgccacaa tgcccattca tcaatcgttt caccgcccgg taatttgcaa ttgttgctga
     3901 ccccttgcgc tgtcgacact ggaatgagcg tcccgccctt ctgctggcaa tagaccgacg
     3961 ccggatttgc cataccaatc tgcggcggtt taggtgcttc tggctgagaa ggggttgaac
     4021 aaccagccag gaccagcaag caaggcagaa caaaactgat aattttcatt tattgatctc
     4081 acatatttat ccagacttag agtatcgcgg tatcgttttg ttttgcagca ctatttttat
     4141 tacattcact caaaacatat tacgtcttgt ttcatctttg ttgatgatgt tttatcatgc
     4201 ctg
//
LOCUS       DADMHC010000254         4149 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.257, whole genome shotgun sequence.
ACCESSION   DADMHC010000254 DADMHC010000000
VERSION     DADMHC010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4149)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4149)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4149
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.257"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(993..1184)
                     /locus_tag="JNZ57_003787"
     CDS             complement(993..1184)
                     /locus_tag="JNZ57_003787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000165985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="HAY8829825.1"
                     /translation="MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLYDH
                     ADELYRSCLARFGDDGENL"
     gene            1249..1572
                     /locus_tag="JNZ57_003788"
     CDS             1249..1572
                     /locus_tag="JNZ57_003788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000956000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobC family plasmid mobilization relaxosome
                     protein"
                     /protein_id="HAY8829826.1"
                     /translation="MLTIRVTDDEHARLLERCEGKQLAVWMRRVCLGEPVARSGRLPT
                     LAPPLLRQLAAIGNNLNQAARKVNSGQWSSGNRVQVVAALMAIGDELRRLRLAVREQG
                     TRDDS"
     gene            1514..2272
                     /locus_tag="JNZ57_003789"
                     /pseudo
     CDS             1514..2272
                     /locus_tag="JNZ57_003789"
                     /inference="COORDINATES: protein motif:HMM:NF015397.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
     gene            2250..2780
                     /locus_tag="JNZ57_003790"
     CDS             2250..2780
                     /locus_tag="JNZ57_003790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000067502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mobilization protein"
                     /protein_id="HAY8829827.1"
                     /translation="MSNLLQTGAEFEKKLKERAESTEKMLNDEFRKLGESVSEAVTSN
                     ETKIKGAIAQFTASTEESLKKHREGVKEAMMQHRKDMLKLAGSSGMRLLGIVFLLFTA
                     SGGTLWYLGGRIQTNLEEIRVQEETLRKLNAKTWGVRYHEGSNGRFLVLPEGMKAETN
                     WTMENGKQNAVRLLQE"
     gene            2787..3020
                     /gene="mbeD"
                     /locus_tag="JNZ57_003791"
     CDS             2787..3020
                     /gene="mbeD"
                     /locus_tag="JNZ57_003791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000137445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MbeD family mobilization/exclusion protein"
                     /protein_id="HAY8829828.1"
                     /translation="MTELERHLLNALEQLQQDYMQRLNEWESAFVELQKMFSLTQRDN
                     AMLNERVMQLSQQVQHLSEQTERLSQLYSENRR"
     gene            complement(3566..4033)
                     /locus_tag="JNZ57_003792"
     CDS             complement(3566..4033)
                     /locus_tag="JNZ57_003792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014526575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829829.1"
                     /translation="MRIDISHQTRHTPPNMLPREQNCVAMALSACFRQQLNPVVNSLL
                     KERIIHSPKELEHDNAVIRALQKLQIQEVCNSTLWETAKQQLLQKSDGRYFAINSKHL
                     AFPGPGESHAFCCIKYKNAIGINGNNAETQSTHYQPYPYDKVSIWGPFPHNLT"
BASE COUNT          979 a          964 c         1235 g          971 t
ORIGIN      
        1 aaaaaaacca ccgctaccaa cggtggtttg tttgccggaa tctagagcta ccaactcttt
       61 cttccgaagg taactggctt ggtggagcgc agataccaaa tactgtcctt ctagtgtagc
      121 cgcagttagg ccaccacttc aagaactctt aatatctcaa tccaccttgt ccagttacca
      181 atggctgctg ccagtggcgt taagtcgtgt cttaccgggt tggactcaag acgatagtta
      241 ccggataagg cgcagcggtc gggctgaacg gggggttcgt gcacacagcc cagcttggag
      301 cgaacgacct acaccgaact gagataccta cagcgtgagc tatgagaaag cgccacgctt
      361 cccgaaggga gaaaggcgga caggtatccg gtaagcggca gggtcggaac aggagagcgc
      421 acgagggagc ttccaggggg aaacgcctgg tatctttata gtcctgtcgg gtttcgccac
      481 ctctgacttg agcgtcggtt tttgtgatgc tcgtcagggg ggcggagcct atggaaaaac
      541 gccagcggcg tggccttttt ccggttcctg gtcttttgcc cacatgttct ttccggcgtt
      601 atcccctgat tctgtggata acagcatttc gtttttgagt gagtagatac cgctcgccgc
      661 agtcgaacga ccgagcgtag cgagtcagtg agcgaggaag cggaaaagcg cctggacgtg
      721 cattttctcc ttacgcatct gtgcggcatt tcacacccgg tatggcgcac ttttcataca
      781 atccgcactg atgccgcatg gttaagcctg tatacactcc gctatcgcga cgtgactggg
      841 tcatggctgc gccccgacac ccgctaacac ccgctaacac ccgctaacac ccgctaacac
      901 ccgctaacac ccgctgacgc gccctgacgg gcttgtctgc tcccggcatc cgctcacaga
      961 taagctttga ccgtctccgg gagctgcatg cgtcagaggt tttcaccgtc atccccgaag
     1021 cgagcgaggc aactgcggta aagctcatcg gcgtggtcgt aaagcgattc acagatgtct
     1081 gcctgttcat ccgcgtccag ttcgttgagc ttctccagca gcgttaatgt ctggcttctg
     1141 ataaagcggg ccatgttaag ggcggttttt tcctgtttgg tcactgatgc ctccgtgtaa
     1201 gggggatttc tgttcatggg ggtaatgata ccgatgaaac gcgagaggat gctcacgata
     1261 cgggttactg atgatgaaca tgcccggtta ctggaacgct gtgagggtaa acagctggcg
     1321 gtatggatgc ggcgggtctg cctgggtgag ccggttgccc gttccgggag gctgccgaca
     1381 ctggcaccgc cgttactgcg tcagctggcc gccatcggga ataacctgaa tcaggcagcg
     1441 aggaaggtga acagcgggca gtggtcttcc ggtaaccggg ttcaggtggt ggccgcactg
     1501 atggccatcg gggatgagct gcgccggctg cgtctggccg tcagggaaca ggggacgcgg
     1561 gatgatagtt aagtttcatg cccggggaaa aggcggtggc cgtggtccgg ttgattacct
     1621 gctgggaagg gagcgtaacc gggaaggggc aacggtgctt cagggtaatc cggaagaagt
     1681 ccgggaactc atcgatgcca cgccatttgc gaagaaatac acgtccggtg ttctctcgtt
     1741 cgcggagaag gcgctgccag cgggaggacg tgaaaaagtg atggcgagtt ttgagcgtgt
     1801 actgatgccc ggtctcgaaa aaaatcagta cagcatcctg tgggtggagc accaggacaa
     1861 gggacggctt gagctgaatt ttgttattcc gaacatggag ctacagaccg gaaaacgcct
     1921 tcagccgtac tacgaccggg cagacaggcc gagaattgat gcctggcaga cgctggtgaa
     1981 tcaccattac gggctgcatg acccgaacgc cccggagaat cgccggacgc tgacactccc
     2041 tgataacctg ccggaaacga aacaggtgct tgctgagggc gttactcgtg ggatagacgc
     2101 actttaccat gccggagaga taaaaggccg tcaggatgtg attcaggcgc tcacagaggc
     2161 ggggcttgaa gtggtcaggg tgacgcgaag cagtatcagc attgcagacc cgaacggcgg
     2221 gaggaacatc agactgaaag gagcgtttta tgagcaatct tttacagacg ggcgcggagt
     2281 tcgagaaaaa gctgaaagag agagccgaat ctacagagaa aatgctgaac gacgaattca
     2341 ggaagctcgg cgaatctgta agcgaggctg tgacctcaaa cgagacgaaa atcaaaggcg
     2401 ctatagccca gtttacggcc tcgacggagg aatcgctgaa aaaacaccgg gaaggggtga
     2461 aagaggcgat gatgcagcac cggaaggaca tgttaaagct ggcagggagt tcgggtatga
     2521 ggttgctggg gatagtcttt ctcctgttta ccgcgagtgg tgggacgctc tggtatctcg
     2581 gcgggaggat acagacgaac ctggaagaaa tcagggtaca ggaagagaca ttgcggaaac
     2641 tgaacgcgaa gacatggggc gtgcgttatc acgaggggag caacggacgt tttctggttt
     2701 tgcccgaggg gatgaaagcc gaaacgaact ggacgatgga aaacgggaaa cagaatgccg
     2761 taaggctgct acaggagtaa cagagcatga cggagctgga aagacatttg ctgaacgcat
     2821 tagagcaact gcaacaggac tatatgcagc ggctgaacga atgggagagc gccttcgtgg
     2881 aattgcagaa aatgttttcg cttacgcaac gggacaacgc gatgctgaat gagcgggtca
     2941 tgcagttgag tcagcaggtg cagcacttga gcgagcagac agaacgcttg agccagttat
     3001 acagcgagaa caggagataa gggacgaacg gctgatacag gaacgcgaac atgcgttatc
     3061 cctggagcgt gagcgccagc tggaaataca ggaacggaca ctggatggcc cttcgctggg
     3121 atggtaatca gagacaggct aaaatgttgt cagcgcgttt ccggtgcatt ttttgggata
     3181 atggttggtt cgggggcacc gggaacgcgc ttcagtcaga ccttgctgaa aacacaggaa
     3241 cgcgttaaaa cgcatacggg cgcgattctg gtgtgtcttt tgttgctgtg ttttgcctct
     3301 attgccagat cgcgctcatt cccctgaact tctgttttcc cgctcagatc cccgtcttct
     3361 tcgcttccga aagcatgaaa aaaatccgtt tcagctgtct ctggctggca attcctgcgt
     3421 gattcacatg gctgcatagc tatgcatgtg gttaaaattt accgggtgcg atcgcggcag
     3481 tttttcgggt ggtttgttgc catttttacc tgtctgctgc cgtgatcgcg ccgaacgcgt
     3541 ttcagcggtg cgtacaatta agatattacg ttaaattgtg agggaatggt ccccatatac
     3601 tgactttatc atagggatag ggttggtagt gggtcgattg ggtttcggca ttgtttccgt
     3661 taatgccaat tgcatttttg tatttgatgc aacagaaggc gtgagattct cctgggcctg
     3721 gaaaggctaa gtgtttagaa ttgatggcaa aatatcttcc gtccgatttt tgaagtagtt
     3781 gttgtttggc tgtctcccaa agggtgctgt tacaaacttc ttgaatttgt agtttttgca
     3841 gggctcttat tactgcgttg tcatgttcca attctttagg ggagtgtatt attctctctt
     3901 ttaataagct gtttaccaca gggtttagtt gttgtctaaa gcacgcagat aatgccattg
     3961 ctacacaatt ttgttcccga ggaagcatgt ttggcggggt atgccgtgtt tgatgtgata
     4021 tgtctattct catagaaggt ctctggctta tagcatcaac aaatacggct ataaaacaaa
     4081 attttcatag agtgattcaa gatcttcttg agatcctttt ttgcggcgcg taatctgctg
     4141 cctgcaaac
//
LOCUS       DADMHC010000255         4097 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.258, whole genome shotgun sequence.
ACCESSION   DADMHC010000255 DADMHC010000000
VERSION     DADMHC010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4097)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4097)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4097
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.258"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            49..948
                     /locus_tag="JNZ57_003793"
     CDS             49..948
                     /locus_tag="JNZ57_003793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8829830.1"
                     /translation="MKREEIADLMAFVVVAEERSFTRAAARLSMAQSALSQIVRRIEE
                     RLGLRLLTRTTRSVVPTEAGEHFLSVLGPMLHDIDSALASLSELQNRPSGTIRITTVE
                     HAAKTILLPAMRTFLKSHPEIDIQLTIDYGLTDVVSERFDAGVRLGGEMDKDMIAIRI
                     GPDIPMAIVGSPDYFSRRSVPTSVSQLIDHQAINLYLPTSGTANRWRLIRGGREVRVR
                     MEGQLLLNTIDLIIDAAIDGHGLAYLPYDQVERAIKEKKLIRVLDKFTPDLPGYHLYY
                     PHRRHAGSAFSLFIDRLKYKGAV"
     gene            1285..2898
                     /locus_tag="JNZ57_003794"
     CDS             1285..2898
                     /locus_tag="JNZ57_003794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415845.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8829831.1"
                     /translation="MKHSVSVTCCALLVSSISLSYAAEVPSGTVLAEKQELVRHIKDE
                     PASLDPAKAVGLPEIQVIRDLFEGLVNQNEKGEIVPGVATQWKSNDNRIWTFTLRDNA
                     KWADGTPVTAQDFVYSWQRLVDPKTLSPFAWFAALAGINNAQAIIDGKATPDQLGVTA
                     VDAHTLKIQLDKPLPWFVNLTANFAFFPVQKANVESGKEWTKPGNLIGNGAYVLKERV
                     VNEKLVVVPNTHYWDNAKTVLQKVTFLPINQESAATKRYLAGDIDITESFPKNMYQKL
                     LKDIPGQVYTPPQLGTYYYAFNTQKGPTADQRVRLALSMTIDRRLMTEKVLGTGEKPA
                     WHFTPDVTAGFTPEPSPFEQMSQEELNAQAKTLLSAAGYGPQKPLKLTLLYNTSENHQ
                     KIAIAVASMWKKNLGVDVKLQNQEWKTYIDSRNTGNFDVIRASWVGDYNEPSTFLTLL
                     TSTHSGNISRFNNPAYDKVLAQASTENTVKARNADYNAAEKILMEQAPIAPIYQYTNG
                     RLIKPWLKGYPINNPEDVAYSRIMYIVKH"
     gene            complement(2949..3980)
                     /gene="ynaI"
                     /locus_tag="JNZ57_003795"
     CDS             complement(2949..3980)
                     /gene="ynaI"
                     /locus_tag="JNZ57_003795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low conductance mechanosensitive channel YnaI"
                     /protein_id="HAY8829832.1"
                     /translation="MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHA
                     VQFLIYTIIISAVGSIINYVIENYKLKFITPGVIDFICTSLIAVILTIKLFLLINQFE
                     KQQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAG
                     KDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITKITTFDNRPLYVPN
                     SLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLV
                     YFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMD
                     NITPPEQGR"
BASE COUNT         1148 a          897 c          964 g         1088 t
ORIGIN      
        1 gattagacct atcatttaaa tgattaatag attgcatgga gatactgaat gaagcgtgaa
       61 gaaatcgctg atctgatggc gtttgtcgtc gttgcagagg agcgtagctt cactcgtgca
      121 gcagcccgcc tgagcatggc gcagtcagct ttaagccaga tagtgcgtcg tatagaagaa
      181 cgattgggat tgcggcttct gacgcgaacc acgcgcagcg ttgttccaac tgaagcgggc
      241 gagcattttt tgtctgttct tggccctatg ttgcatgaca tagattcagc cctggcatcc
      301 ctgagcgagc tgcagaaccg cccatccggg acaatacgta ttactactgt agaacatgca
      361 gcaaaaacga tattgttacc agcaatgcgc acattcctga aatcgcatcc tgaaattgat
      421 attcagctca ccattgatta tggtttgacc gatgtcgttt ctgaacgttt tgatgcaggc
      481 gtccgtctgg gtggggagat ggataaagat atgatcgcca ttcgaatcgg gccagatata
      541 ccaatggcta ttgttggctc accggattat ttttctcgcc gaagtgttcc aacgtcagtg
      601 tcacaattaa tagatcatca ggcaattaat ttgtatcttc ccacatcggg tacagcaaat
      661 cgctggagat taatacgcgg tggacgtgaa gttcgtgttc gcatggaagg tcagctttta
      721 ctgaatacga tagacctgat cattgatgct gcaattgatg ggcatggatt ggcgtatcta
      781 ccttatgatc aggttgagcg ggctattaaa gaaaaaaaac tgatacgtgt tttggataaa
      841 ttcacaccag atttacccgg ttatcacctg tactatccac accgtcgaca tgctggctcg
      901 gcattctcat tatttataga taggctgaag tataaaggtg ctgtttagca ctacttgctg
      961 atacattaat ttaatttctc tcttaacgta ttctcagttc ctttcaacgt tttggttatt
     1021 ttttattctt cgtacaatgg cgacagatgc tgattttgat accgaaaact ggtttgaacg
     1081 tgcgaagcct gaacgtagtg ttcggtgttc tatgtgcttt gccgcatttt ggcgtcgatt
     1141 atttacacta aatctgattt aatatattga tacataaaat attttatgct tcctgtgtca
     1201 cttttttgat ggaagttgtt tgcatttctt taaggcgaaa caaataatta cgcatcaatt
     1261 ttaatgtcgg ttagagggaa acttatgaag cactctgttt cagtcacgtg ttgtgcgctg
     1321 ttggtcagca gcatttctct ttcgtatgct gcagaagttc cgagcggcac agtactggca
     1381 gagaagcagg agctggtgcg ccacattaaa gatgagcctg cgtcgctgga tcccgctaaa
     1441 gccgtgggcc tgccagagat tcaggtcatt cgcgatctgt ttgaaggact ggtgaatcag
     1501 aacgagaaag gggagattgt ccccggcgtt gcgactcagt ggaaaagtaa tgacaaccgt
     1561 atctggactt ttaccctgcg cgataacgca aaatgggcgg atggcacacc ggtaacggcg
     1621 caagattttg tctacagctg gcagcgtctg gtggacccga aaacgctatc gccatttgca
     1681 tggtttgccg cgctggcggg aatcaacaac gcacaggcga ttattgatgg taaagctacg
     1741 cctgaccagc ttggcgtcac cgcagttgat gcccatacct tgaaaattca gcttgataaa
     1801 ccgttgccgt ggtttgtgaa tttaaccgct aactttgcct tcttcccggt gcaaaaagcc
     1861 aacgtagaaa gcggtaaaga gtggacgaaa cccggaaatc tgatcggcaa tggcgcttat
     1921 gttcttaaag aacgcgtagt caatgaaaaa ctggtcgtgg taccgaatac ccattattgg
     1981 gataacgcca aaacggtact gcaaaaagtg accttcctgc caattaatca ggaatccgca
     2041 gccactaagc gttacctcgc gggggatatt gatatcaccg aatccttccc gaaaaatatg
     2101 tatcagaagc tgttgaagga tattccgggg caggtttata cgccgccgca gctcgggacc
     2161 tattattatg cgtttaacac gcaaaaaggg ccgacggcag atcagcgcgt tcgcctggca
     2221 ttaagtatga cgatagatcg ccgcctgatg accgaaaaag tgttgggaac gggcgaaaag
     2281 ccagcgtggc attttacacc agatgttacc gccggattta cgccggaacc ttcgccgttt
     2341 gaacaaatga gtcaggaaga actgaatgcg caggcaaaaa ctttgttgag cgcagctggt
     2401 tatggtccgc aaaaaccgct gaagctgacg cttttgtata acacttcaga aaaccatcaa
     2461 aaaattgcga ttgctgtagc atcgatgtgg aaaaagaacc ttggcgtaga tgttaaattg
     2521 caaaatcagg aatggaaaac ctatatcgat agccgtaaca ccggcaattt tgatgttatc
     2581 cgcgcctcat gggtggggga ttataatgaa ccctccactt tcctgacatt attaacgtca
     2641 acgcattcag gaaatatttc acgctttaac aatccggcat acgacaaagt tctggcccag
     2701 gcatcgacgg aaaataccgt taaagcgcgt aatgccgatt acaacgcggc agaaaaaatc
     2761 ctcatggagc aagcaccgat tgcaccaatt tatcaatata ccaatggacg attaatcaag
     2821 ccgtggctga aaggttatcc cattaataac ccggaagatg tggcgtacag ccggattatg
     2881 tatattgtga agcattgatg tgatgggaac tggcgttacc cttgtggata acgccagtga
     2941 tgtctgattt agcgcccctg ttccggcggt gtaatgttat ccatatacag cgtctggctg
     3001 gggaaggcaa agtccgcgcc gtgtgactgc acaatatcga taatcttcaa ataaacgtct
     3061 tgttgtgcag caagccattc agcccatacc gtggttttgg taaagcaata aaccataata
     3121 ttcaatgacg agtcggcaaa ctggttgaaa taaaccagta aggtttgtcg ctggtcgatg
     3181 gccgggtgat ttttcagcat ctcacgtacg gcttcgacaa taacgcccac ttttgccgca
     3241 tcctcataac gtaaaccaat ggtcgtggta atgcggcggt tggtcattcg tcctgggttt
     3301 tctacgctga tcgacgaaaa cagcgagttc ggtacgtaca atggacgatt atcaaaggtc
     3361 gtaattttgg taattcgcca gccaatttcc gctactgtac cttcgatatt tctgtccggt
     3421 gaacggatcc agtcgccaat actgaaagga cggtcgaaat agagcatgat cccggaaaag
     3481 aaattactca gaatatcttt tccggccata ccgacagcca gaccaccaat accaccaaag
     3541 gtcagcaagc cagaaaggct catgccgaaa tgttcgccat aaagcagaac aagcaccaca
     3601 ataatggtga ttttgataat gcgcgacata atccgcgcac tggtgatatc gcgacctttt
     3661 ttaatctgct gtttttcaaa ctgattaatc agcaaaaata gcttaatcgt cagaataacc
     3721 gcaatcaggg acgtacagat aaaatcgata acgcctgggg tgataaattt gagtttatag
     3781 ttttctataa cataattaat aatgctacca acagcactga taattatggt gtagattaaa
     3841 aattgcaccg catggaataa aaaacctttt cttttacgat ttccgcggcg aaaccaaaag
     3901 ctcatcagaa tcaatgctgc gcagctaccg aaaataatga ccagattaag cgcattattt
     3961 gtaaacagtt cagcgatcat tgttttatca ggctcctcca gataattgtc gtcatgccgg
     4021 aaccccctgg cggggctatt ttaccgcgac aattcattca gatcatcaat agtcagggaa
     4081 ggaagtagca acattag
//
LOCUS       DADMHC010000256         4092 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.259, whole genome shotgun sequence.
ACCESSION   DADMHC010000256 DADMHC010000000
VERSION     DADMHC010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4092)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4092)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4092
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.259"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(70..894)
                     /gene="kduI"
                     /locus_tag="JNZ57_003796"
     CDS             complement(70..894)
                     /gene="kduI"
                     /locus_tag="JNZ57_003796"
                     /EC_number="5.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-dehydro-4-deoxy-D-glucuronate isomerase"
                     /protein_id="HAY8829833.1"
                     /translation="MDVRQSIHSAHAKTLDTQGLHNEFLVEKVFVADEYTMVYSHIDR
                     IIVGGIMPITKTVSVGGEVGKQLGVSYFLERRELGVINIGGAGTITVDGQCYEIGHRD
                     ALYVGKGAKEVVFASIDTAIYYNCAPAHTTYPTKKVTPDEVSPVTLGDNLTSNRRTIN
                     KYFVPDVLETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFHMMGQ
                     PQETRHIVMHNEQAVISPSWSIHSGVGTKAYTFIWGMVGENQVFDDMDHVAVKDLR"
     gene            complement(1181..2362)
                     /locus_tag="JNZ57_003797"
     CDS             complement(1181..2362)
                     /locus_tag="JNZ57_003797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708633.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HAY8829834.1"
                     /translation="MKDVVIVGALRTPIGCFRGALAGHSAVELGSLVVKALIERTGVP
                     AYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQAI
                     QCGEADIVIAGGQENMSRAPHVLTDSRTGAQLGNSQLVDSLVHDGLWDAFNDYHIGVT
                     AENLAREYGISRQLQDAYALSSQQKARAAIDAGRFKDEIVPVMIQSNGQTLVVDTDEQ
                     PCTDASAEGLARLNPSFDSLGSVTAGNASSINDGAAAVMMMSEAKARALNLPVLARIR
                     AFASVGVDPALMGIAPVYATRRCLERVGWQLADVDLIEANEAFAAQALSVGKMLEWDE
                     RRVNVNGGAIALGHPIGASGCRILVSLVHEMVKRNARKGLATLCIGGGQGVALTIERD
                     E"
     gene            2617..3846
                     /locus_tag="JNZ57_003798"
     CDS             2617..3846
                     /locus_tag="JNZ57_003798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
                     /protein_id="HAY8829835.1"
                     /translation="MSNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITA
                     LVAWPLTYWPHKALCQFILSSKTSAGEGITGAVTHYYGKKIGNLITTLYFIAFFVVVL
                     IYAVAITNSLTEQLAKHMVIDLRIRMLVSLGVVLILNLIFLMGRHATIRVMGFLVFPL
                     IAYFLFLSIYLVGSWQPDLLTTQVEFNQNPLHQIWISIPVMVFAFSHTPIISTFAIDR
                     REKYGEHAMDKCKKIMKVAYLIICISVLFFVFSCLLSIPPSYIEAAKEEGVTILSALS
                     MLPNAPAWLSISGIIVAVVAMSKSFLGTYFGVIEGATEVVKTTLQQVGVKKSRAFNRA
                     LSIMLVSLITFIVCCINPNAISMIYAISGPLIAMILFIMPTLSTYLIPALKPWRSIGN
                     LITLIVGILCVSVMFFS"
BASE COUNT         1086 a         1007 c          876 g         1123 t
ORIGIN      
        1 ccgcaacttt accttcgaga gaaaatgcac ttaaaatcat aacaatacct tattcgttta
       61 tgcccacaac tagcgcaaat ctttaacggc cacatggtcc atatcatcaa agacctggtt
      121 ttcaccaacc atgccccaga taaaggtata agctttggtt ccgacgccgg aatgaatcga
      181 ccagctcggg gagatcaccg cctgctcgtt atgcatcaca atgtgacgcg tttcttgcgg
      241 ttgccccatc atgtggaaaa cgcaggcgtc atcatccata ttgaaataga aataaacttc
      301 catccggcgc tcgtgggtgt gacacggcat ggtgttccac aagttacctg gagccagctc
      361 cgtcagcccc atactcaatt ggcaggtttc cagcacatcc gggacaaaat atttgttaat
      421 agtgcgacgg ttactggtga ggttatcgcc taacgtgact ggagatactt cgtccggggt
      481 gacttttttg gtgggatacg tcgtatgcgc gggtgcgcaa ttgtaataaa tggcggtatc
      541 aatactggca aagacaactt cttttgcacc tttaccaaca tacagggcgt cgcggtgacc
      601 gatttcatag cattggccat cgacagtaat cgtaccggca ccgccaatat tgataacacc
      661 taactcgcga cgttcaagga aatagcttac gccgagttgt ttaccaactt ccccgccaac
      721 ggaaaccgtt ttagttatcg gcataatgcc gccaacaata attcggtcaa tgtggctgta
      781 aaccatggtg tactcatcgg cgacaaatac cttttcaacc aaaaattcat tgtgcagccc
      841 ttgggtatcc agcgtttttg cgtgcgcact gtggatgctc tgtcttacgt ccacatcaac
      901 ctccgataat cagtgaagcg tgaaaataga aaacgatagt gaaacactgt ttcgttttct
      961 ctataaaggg atgatatgcc catgggctag ggttttcaat taaaaataaa acaatgtttt
     1021 atttttaagt taaggattaa aaaaagtgca gtgtcgatca cgaatatgtc atgagaatgg
     1081 aaaaatgagg gagcccagaa aatgtatgtc gacttgccag ccatcattat tcaacagatt
     1141 aatgacggca gatatttatc ggtaaggagg aaatgcagag ctactcgtca cgttcaatgg
     1201 tcaatgccac gccctggccc ccgccgatac aaagcgttgc cagccctttg cgggcattac
     1261 gtttcaccat ttcatgaacc agagaaacca ggattcggca accggaagcg cctatcgggt
     1321 gaccgagtgc gatcgcgcca ccattgacat tgacccgacg ctcatcccac tcaagcatct
     1381 tgccaaccga aagcgcctgt gcagcaaacg cttcattagc ctcgataaga tcgacatcag
     1441 ccaactgcca gcctacacgc tccaggcaac ggcgggtcgc atacaccggc gcaattccca
     1501 tcaatgccgg atctacacca acgctggcaa atgcgcggat gcgggccagc acgggtaaat
     1561 tcaacgctcg tgctttggct tcgctcatca tcattaccgc agctgcgcca tcgtttatgg
     1621 atgatgcatt ccccgcggtc acagaaccga gactatcaaa tgaaggattt aaacgggcta
     1681 aaccttctgc actggcgtca gtgcatggct gttcatcggt atcaacaacc aacgtctgac
     1741 cgttactttg gatcattacc gggacgatct catctttaaa tcgtccggcg tcaatcgccg
     1801 ctcgcgcttt ttgttgcgag ctaagtgcgt aagcatcctg caactgacgg ctgatgccat
     1861 attcgcgagc cagattttcg gcggtgacac caatatgata atcattgaag gcatcccaca
     1921 acccatcatg caccagactg tcaaccaact ggctattgcc aagctgtgca ccggtgcggc
     1981 tatcagtcag aacatgtggt gcgcggctca tgttttcctg gccaccggcg atgacaatat
     2041 cagcctcgcc acactgtatc gcctgagtag ccagatgcag tgctttaagc ccagaaccgc
     2101 aaacgtcatt aatagtgatt gcagaaacgc tattaggaag accaccttta atagccgatt
     2161 gccttgccgg attctgccct gcccctgcag tcaacacctg accaagaatt acttcatcca
     2221 ccgcatatgc aggaacgccg gtacgttcta ttaacgcttt cacgaccaaa ctaccaagtt
     2281 ccacggcgga atgacccgct aacgcaccac gaaagcagcc gataggtgtc cgtaacgccc
     2341 cgacaatcac aacgtctttc atcacaacct cgcaccaatt aacagtgcaa tagtaaatga
     2401 ttgttaatta cagttatctt aattgtttaa aaaaagtgat ttttatcaca aaggaaatat
     2461 gcctgagcag cagtcagata cataactggc acgtaaggtt tgcaaccact aacccaccaa
     2521 tagaggggta gatagggcgt taatctccca tacttaacct ggtttatggt aaattgccct
     2581 ccattttgtt taatttgtag atgatatgtt cagataatgt ctaatatttg gtctaaagaa
     2641 gaaactctgt ggagtttcgc gctctacggc acagccgttg gtgcaggcac gctcttcctt
     2701 cctattcagt taggttcggc aggggctgtg gtcctgttta ttactgctct ggtcgcctgg
     2761 cctttaacat attggccaca taaagcttta tgccagttca tcctctcatc gaaaacatca
     2821 gcaggtgaag ggataacggg cgcggtaaca cactactatg gcaagaagat tggtaatctg
     2881 attaccacgc tgtacttcat cgcctttttt gtcgtcgtgt tgatatatgc agtggcaatt
     2941 accaactcac ttacagaaca gctggcaaag catatggtta ttgatcttcg catccgtatg
     3001 ttggtgagtc tgggtgttgt attaatcctg aatctcattt ttctgatggg acgccatgca
     3061 accattcggg taatgggttt tttggtattc ccattgattg cctatttctt atttctttcc
     3121 atttaccttg tcggtagttg gcaacctgat ctattaacga cccaggtaga gttcaatcag
     3181 aatccccttc accagatatg gatatcgatt cccgtgatgg ttttcgcctt tagccatacg
     3241 cccattattt ctacgtttgc catagacaga cgtgaaaaat atggcgaaca cgctatggat
     3301 aaatgcaaaa aaattatgaa agtcgcttat ctcatcatct gcataagtgt actgttcttt
     3361 gtctttagct gcctgctttc tattccacct tcgtatattg aagcggctaa agaagaaggg
     3421 gtcaccattt tatcggcgct ttctatgctg ccgaacgccc cagcatggtt gtcaatttcc
     3481 gggattattg tcgcagtagt tgcgatgtcg aaatcattcc tgggtacgta ctttggcgtt
     3541 attgaaggtg ccacggaggt cgtcaaaaca acactacagc aggttggtgt aaagaaaagt
     3601 cgtgcattta accgcgcact atcaattatg ttggtatcgc tgattacctt cattgtttgt
     3661 tgcattaacc cgaacgcgat ttcgatgatt tatgcgatca gcggcccgct cattgccatg
     3721 atacttttca tcatgcctac gttgtcaacg tatctgatcc cggcgcttaa accctggcgc
     3781 tccatcggaa atctgattac gctgatcgtg ggtatcctgt gcgtatcggt aatgttcttt
     3841 agctaatatc cgttgtggat ggttcaaaat tgctacaatt ttgaaccatt ccatttttca
     3901 taatattcat ttgttattat tccgccctat cacttctctc gtcatatcct agaattatca
     3961 gttagttaaa cacacaaaga gatctgaaca tcttaaataa gactatttaa gatgcataac
     4021 ttagattcgc aagatatctt ctggtcattc aaaaacaatt tgcgatatag atattctcat
     4081 accatgagat ag
//
LOCUS       DADMHC010000257         3988 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.260, whole genome shotgun sequence.
ACCESSION   DADMHC010000257 DADMHC010000000
VERSION     DADMHC010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3988
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.260"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..1865)
                     /locus_tag="JNZ57_003799"
     CDS             complement(<1..1865)
                     /locus_tag="JNZ57_003799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8829836.1"
                     /translation="MTVKISGVLKDGTGKPVQNCTIVLKARRTSSTVVVNTVASENPD
                     EAGRYSMDVEHGQYSVTLLVEGFPPSHAGTITVYEGSRPGTLNDFLGAMTEDDVRPEA
                     LRRFEQMVEEVSRNASAVAQNTAAAKKSASDASASASEAATHATDAAASARAASTSAG
                     QAASSAQSASSSAGTASTKATEALKSAAAAESSKSAAATSAGAAKTSETNAAASQQSA
                     ATSASTATTKASEAATSARDASASKEAAKSSETNAASSASSAASSATAAANSAKAAKT
                     SETNARSSETAAEQSASAAAGSKTAAASSASAASTSAGQASASVTAAGKSAESSASSA
                     STATTKAGEATEQASAAARSASAAKTSETNAKASETSAESSKTAAASSASSAASSASS
                     ASASKDEATRQASAAKSSATTASTKATEAAGSATAASQSKTTAESAATRAEAAADRAE
                     EIAGAVAMEDASLTTKGVVKLSSAVDSTSESLAATPKAVKAANDNANSRVPSNRKVNG
                     KALTADITLTPKDIGTLNSVTMSFSGGAGWFKLATVTMPQASSIVYIALIGGAGYNVG
                     SPHQAGISELVLRAGNGNPKGITGALWKRTAVGLTNFAWINTSGDTYDIYVEIGN"
     gene            complement(2017..2616)
                     /locus_tag="JNZ57_003800"
     CDS             complement(2017..2616)
                     /locus_tag="JNZ57_003800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ail/Lom family protein"
                     /protein_id="HAY8829837.1"
                     /translation="MRKLCAVILSAVVWQVAAATPASAAEHQSTLSAGYLHASTNVPG
                     SDDLNGINVKYRYEFTDALGLITSFSYANAEDEQKTRYSDTRWHEDSVRNRWFSVMAG
                     PSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAW
                     GAGVQFNPTESVAVDLAYEGSGSGDWRTDAFIVGIGYRF"
     gene            complement(2684..>3988)
                     /locus_tag="JNZ57_003801"
     CDS             complement(2684..>3988)
                     /locus_tag="JNZ57_003801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_305676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1983 domain-containing protein"
                     /protein_id="HAY8829838.1"
                     /translation="YFQITATPHLAVYDPTVQFEFWFSEKRIADIRQVETAARYLGSA
                     LYWIAASINIKPGHDYYFYIRSVNTVGKSAFVEAVGRASDDVEGYLDFFKGEIGKTHL
                     AQELWTQIDNGQLAPDLAEIRTSITNVSNEITQTVNKKLENQSAAIQQIQKVQVDTNN
                     NLNSMWAVKLQQMQDGRLYIAGIGAGIENTPAGMQSQVLLAADRIAMINPANGNTKPM
                     FVGQGDQIFMNEVFLKYLTAPTITSGGNPPAFSLTPDGRLTAKNADISGNVNANSGTL
                     NNVTINENCRVLGKLSANQIEGDLVKTVGKAFPRDSRAPERWPSGTITVRVYDDQPFD
                     RQIVIPAVAFSGAKHEKEHTDIYSSCRLIVRKNGAEIYNRTALDNTLIYSGVIDMPAG
                     HGHMTLEFSVSAWLVNNWYPTASISDLLVVVMKKATAGITIS"
BASE COUNT          838 a         1128 c          988 g         1034 t
ORIGIN      
        1 taattgccaa tctcaacgta aatatcatat gtatcgccgg atgtgttgat ccaggcgaaa
       61 ttagttaatc cgacggctgt acgcttccac aaagccccgg taattccttt ggggtttcca
      121 ttgcctgctc gtagaaccag ttctgaaatg cctgcctgat gtggggaacc gacgttgtaa
      181 ccagcgccac caatcaatgc gatgtaaacg atggaactcg cttgtggcat ggtaaccgta
      241 gccagtttga accacccagc cccgccagag aaagacatcg ttactgaatt taaagtacca
      301 atatctttcg gcgttaatgt tatatccgca gtcaatgctt ttccgttaac ttttcggtta
      361 gatggcaccc tgctattcgc attgtcattg gctgctttaa ctgcttttgg cgttgcggcc
      421 agcgattcac tggtgctatc aacagcactg ctaagtttca caacaccttt agttgtaagg
      481 cttgcgtctt ccatcgcaac tgcaccggca atctcttcag cacgatcagc agcagcttcc
      541 gcacgggtcg cagcggattc agcagtagtt ttgctctgag atgctgccgt cgcactgcct
      601 gccgcctctg ttgccttcgt ggatgccgtc gtggcgctgc tcttcgctgc tgacgcttgt
      661 ctggtcgcct catcttttga agcagacgcc gatgatgccg atgacgccgc cgaactggcg
      721 gacgatgcgg cagccgtttt tgaggattct gcgctggttt ccgacgcttt cgcgttcgtt
      781 tcggatgtct tcgctgcgga agcagacctc gctgctgcgc tggcctgttc agtggcttcg
      841 ccagccttcg ttgtggctgt tgaagcagac gatgcggagc tttctgccga ttttccggcg
      901 gcggtgacac tggctgaggc ctgcccggca cttgttgacg ctgcactggc agacgacgca
      961 gccgctgttt ttgagcctgc cgcagctgag gcactctgtt ccgctgccgt ttcagaagac
     1021 ctggcgtttg tctcagacgt ttttgccgcc ttcgcagaat ttgctgccgc cgttgccgag
     1081 gaagctgcgc tgctggcgct cgaggctgcg ttcgtttctg atgattttgc cgcctctttt
     1141 gaagccgacg catcccgtgc tgaagtggct gcttctgacg ctttcgtggt cgcggtggat
     1201 gcagaagtgg ctgctgattg ttgtgacgct gccgcattcg tttctgacgt tttcgccgca
     1261 ccggcactgg tagccgccgc gctttttgag gactctgcag cggcagcact ttttaatgct
     1321 tcagtggcct ttgttgatgc cgttcctgcg ctggaagacg ctgactgagc cgacgacgcg
     1381 gcctgtccgg ctgacgtgct ggcggcacgt gctgaggctg cagcatcggt tgcatgagtt
     1441 gccgcctcgc tggctgatgc actggcatcg ctggctgatt ttttcgcggc tgccgtattc
     1501 tgtgcaaccg cggaggcgtt acgtgacacc tcttccacca tctgctcaaa gcggcgcagt
     1561 gcctccggtc ggacatcatc ctccgtcatg gcaccgagaa aatcattcag cgtacctggt
     1621 ctggaacctt catagacggt aatggtcccg gcatgtgaag gcggaaaacc ttcaaccagc
     1681 agggtgacgc tgtactgacc atgctcaaca tccatgctgt aacgtccggc ttcatccgga
     1741 ttttcagagg ccaccgtgtt caccaccacc gtgctgctgg ttcgtctggc cttcagcaca
     1801 atggtgcagt tctgtactgg ttttcctgtg ccatctttaa gcacgccaga aatttttact
     1861 gtcatacttt tccaccaata aaaaaagccc gcagcagtga cgccacgggc ttcaggacag
     1921 tgtaacttta cgtttcctca aacgcagttc accccataaa gtggatgaac ctgcgtatca
     1981 taacaatatt tacagaagat aaatcggcgt ctgttgtcag aaacggtatc cgataccaac
     2041 aataaatgca tccgttcgcc agtcgccact accggaacct tcataagcaa ggtcaacggc
     2101 cacggattcg gtcgggttaa actgcacgcc agccccccac gccagagagg tattgctgtg
     2161 gcgaccgtca tcacttccgg tcagcacgtc gtgcgttttc cccttgttgt cagttacgcg
     2221 gagataatcc ccggagaaag tcgacacacg gctgtaagcc acacccgcca tcgcatacgc
     2281 gctgaaccat tcattcacgc gtacagacgg ccccgccatc acgctgaacc agcggttacg
     2341 cacggaatct tcatgccagc gggtatcgct gtagcgcgtt ttttgctcat cctcagcatt
     2401 ggcataactg aaggacgtaa tcagccccag cgcgtccgta aactcataac ggtatttcac
     2461 gttaatcccg ttcagatcat cactaccggg aacgttcgtc gaggcatgga gataccccgc
     2521 gctcagcgtg gactgatgtt ctgctgcact cgctggcgta gcagcggcga cctgccagac
     2581 tactgcggac aaaataacag cacataattt acgcataatt acctctcgct tttctgcaat
     2641 aaaaaaggcg ccatttctgg cgcccgtatc tgggttataa aattcagcta atcgtgatgc
     2701 ctgcagtggc tttcttcatc accacaacca gcaaatcgct gatacttgct gtgggatacc
     2761 agttatttac cagccatgct gacaccgaaa actccagtgt catgtgaccg tgaccggcag
     2821 gcatatcaat aacaccactg taaatcagcg tattatccag cgcggtacgg ttataaattt
     2881 cagcaccgtt tttccgcact atcagacggc atgaggagta aatatcagta tgctctttct
     2941 catgtttagc gccgctgaat gccaccgccg gaataacaat ctgccggtca aacggctgat
     3001 cgtcataaac cctgacggta atggttcctg atggccaccg ctctggtgca cgggagtccc
     3061 gggggaaagc tttgcccact gttttaacga gatcgccttc aatctggttc gcggacaatt
     3121 ttcccagaac ccgacagttc tcgttaatag tgacgttgtt gagcgtcccg gagttcgcat
     3181 tcacgttacc gctgatatcg gcatttttcg ccgtcagccg cccgtccggt gtcagggaaa
     3241 atgccggagg attaccgccg ctggtaatgg tgggagccgt cagatatttc aggaacactt
     3301 cattcataaa tatctgatcg ccctgaccaa caaacatcgg ctttgtgttg ccattcgcag
     3361 gattaatcat cgcaatcctg tctgccgcca gcagcacctg actctgcatt cctgctggcg
     3421 tattctcaat accggcaccg atacccgcaa tataaaggcg tccgtcctgc atctgctgca
     3481 gtttcacggc ccacatgctg ttcaggttat tatttgtatc aacctgaact ttctgtatct
     3541 gctggattgc cgcactctga ttttccagtt ttttattgac ggtctgcgtg atttcattgc
     3601 tgacattcgt aatggacgtc ctgatttcag ccaggtccgg tgcaagctga ccgttatcaa
     3661 tctgcgtcca cagctcctgg gccagatgtg ttttcccgat ttctcctttg aaaaaatcca
     3721 ggtaaccttc cacatcatcg ctcgcccgac cgacagcctc cacgaatgcc gatttgccaa
     3781 cagtattcac actgcggata taaaaataat aatcatggcc cggtttgata ttgatactgg
     3841 cagctatcca gtacagcgcc gagccaagat agcgggctgc ggtttcaacc tgcctgatat
     3901 ccgcaatccg cttttccgag aaccagaact caaactgtac cgtcgggtca taaacggcaa
     3961 gatgtggcgt tgcggttatc tgaaaata
//
LOCUS       DADMHC010000258         3979 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.261, whole genome shotgun sequence.
ACCESSION   DADMHC010000258 DADMHC010000000
VERSION     DADMHC010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3979)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3979
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.261"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..513)
                     /locus_tag="JNZ57_003802"
     CDS             complement(<1..513)
                     /locus_tag="JNZ57_003802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706235.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA ligase RtcB family protein"
                     /protein_id="HAY8829839.1"
                     /translation="MGNYIRPLSDAVFTIASDDQWIESLAIQQLHTTANLPNMQRVVG
                     MPDLHPGRGYPIGAAFFSVGHFYPALVGNDIGCGMALWQTDILARKYNADKFEKRLSD
                     LDDVAEESWLEENLPSAFAQHPWCSSLGSIGGGNHFAELQQVDQIINAELFALAGLDA
                     QHLQLLVHSGS"
     gene            complement(759..1211)
                     /locus_tag="JNZ57_003803"
     CDS             complement(759..1211)
                     /locus_tag="JNZ57_003803"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY8829840.1"
                     /translation="MNNIQIRDYQPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQI
                     DESRWKEKLAKSQVRVAVINAKLVGFITCVEHYIDMLFVDPEYTRRGVASALLKPLIK
                     SESELTVDASITAKPFFERYGFQTVKQQRVECRGEWFINFYMRYKQQH"
     gene            complement(1208..2272)
                     /gene="dinB"
                     /locus_tag="JNZ57_003804"
     CDS             complement(1208..2272)
                     /gene="dinB"
                     /locus_tag="JNZ57_003804"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012421601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HAY8829841.1"
                     /translation="MYKKVKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVI
                     STANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEP
                     LSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNK
                     PNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRF
                     GKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERR
                     LAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRL
                     VGLHVTLLDPQMERQLVLGL"
     gene            complement(2319..3089)
                     /locus_tag="JNZ57_003805"
     CDS             complement(2319..3089)
                     /locus_tag="JNZ57_003805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001460821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829842.1"
                     /translation="MICTNQLRYTGKDGVYFHLQGQPDNFLSLSATENMEFDSPMMVT
                     TQNMQSGQTVTDNVQRAPRTITISGVVVVGESGSILISRDNKLVENFIDTLESWRDQK
                     QIISVICKDGIKIDDSIITSFKASKDVGISNGLRIQLTFQEINFKAIVGQTDISAATG
                     KTATTNDGGATSKKNTGNTTTSLGNGMLMCQELYNRSTSELTNEQLQARINCGKNVRV
                     ENGKSTFSDAANEQASKVLKSGNALRKYSVNPNKKGTY"
     gene            complement(3253..>3979)
                     /locus_tag="JNZ57_003806"
     CDS             complement(3253..>3979)
                     /locus_tag="JNZ57_003806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001128198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829843.1"
                     /translation="VRGFFDEVTLAYRGLTDEQKKVVDALGSGLINSLKVLAGVIAVK
                     KVVGVTRSIYGLMTAITRLGQVADTTADNVNRKNGKPSRLNPMNMLLAGSAIYAGYER
                     LASTPERMEAQAKLPELAKESGLKPVFTMDDVKGWFSSAANKIANFQEPMNNFVNNTQ
                     STPPAITGDIVNSNAQLAMTISELSRKVDALTVEAKKPLSVNITGEATVRPDEPAFFT
                     FNQSANDQFTQDMLLSSSYPEEE"
BASE COUNT         1062 a          929 c          846 g         1142 t
ORIGIN      
        1 cgagccgcta tgaaccaaca gttgcagatg ttgtgcatcc agacctgcta gtgcaaacag
       61 ttcagcgttg atgatttgat caacttgttg cagttcagcg aaatgattgc cgccaccgat
      121 agagccaagc gagctgcacc aaggatgctg tgcaaatgct gacggcaggt tttcctccag
      181 ccagctttct tcagcaacgt catccagatc tgataatcgc ttttcaaact tatcggcgtt
      241 gtatttgcga gcgagaatat ctgtttgcca tagcgccata ccgcagccga tatcattgcc
      301 gaccagtgcc ggataaaaat gaccaacaga gaagaacgct gcgccaatcg gatagccgcg
      361 tccgggatgt aaatctggca tccccactac gcgctgcatg ttgggtaaat ttgccgtggt
      421 gtgtaattgt tggatcgcta aactctcgat ccactggtca tcagatgcga tggtaaatac
      481 cgcatcggat aagggacgaa tataattgcc catataccat tccgtaaata gactcgtcat
      541 acttcaagtt gcatgtgttg cgacttgaat tattgagagt aacaattaaa aaatcaggaa
      601 atagcagacg aatccagggc aagaaaaaaa gaattaatcc tggaaaggtc tgcaaagagt
      661 cattgataaa ggatttgtca tgatttacct ccttgcagtt tgtggaataa gaaaacgcgc
      721 acatactagg cttgcgttat tttcattgca agctggattt aatgttgctg tttataacgc
      781 atataaaaat taataaacca ctctccccga cattcaacgc gttgctgctt aactgtctga
      841 aaaccataac gttcaaaaaa gggttttgcg gttatgcttg cgtccaccgt aagttcggat
      901 tcagacttaa tcaaaggttt taacaaagcg ctggcaaccc cacggcgggt gtattcaggg
      961 tcaacaaata acatatcgat atagtgttca acgcaggtaa taaagccgac cagttttgca
     1021 ttaatgactg caacccgcac ttgtgatttc gcgagtttct ccttccagcg agattcgtca
     1081 atctgcgccc aggcggcaat ttgttgtggt gaataatgct gactggcagt catcgtaacc
     1141 gctctaatga aaatagcgca tagttgctga aaatcgccag gctgatagtc tcttatttgt
     1201 atgttattca taatcccagc accagttgtc tttccatttg cgggtcaagc aacgtcacat
     1261 gcagccccac cagtcgcaca ccgcgcccgc cgcggcgttc atcccaggtt ttacgcgcgg
     1321 tggcgattaa gtcagcttta ttcagccgcg gccagacgtg ctcctgagtg gtttgctgaa
     1381 aatcatcaaa ctttaatttc accccctggc gagcaatcag taaatcaggt ttcacctttg
     1441 ccagacggcg ttcaagttcc ggatacagcc gctcgataat cgcttcacat tcagaccagt
     1501 ggtggatatc ttccgccatc gtgcgttcca cgccgacgga ttttcgcaac cgttcgctgt
     1561 taacgtcgcg ctcgtcaatc ccctgactac gctcccacaa aatgcggcca aatttgccaa
     1621 agcgtttaag cagcatcacc agatcacact tttgtacatc accgcaggtt cgtagcccca
     1681 tcgcttccag ttttgccgcc gagactttgc cgacgccggg gatttttgcc agtggtaagg
     1741 tttgtaaaaa tgccggaact tctgccggcg taatcacaaa ctggccgttg ggtttattca
     1801 tgtcggaggc gattttggcg agaaacttta cgggtgccac gcccgcagac gccgtcagtt
     1861 gcagctcgtt gaaaatcgtc tggcggattt cctgggcgat gagggtcgca gaaccgtggc
     1921 aatggacgct atcggtgacg tcgagataag cctcatccag tgacaacggt tcaatacgcg
     1981 aggtgtagcg cgagaagatt tcgcggatat gatttgaggc ttctttgtag gcgtcaaagc
     2041 gccccggaag caaggtgaga tgcgggcata atttgagcgc catccctgtc ggcatagcgc
     2101 tacgtacgcc aaatttacgc gcgggataat tggcggtact gatcaccccc cgacgttcgc
     2161 ggctgccgcc aatagcaata gggatatcgc gcagggcggg attgtcgcgc atctccaccg
     2221 ccgcgaaaaa gcagtccata tccacatgaa taatcttcac tttcttatac accctgtgta
     2281 tttatacatg caaagagatt atacacacaa aagcaaaatc agtaagtgcc cttcttattc
     2341 ggattcacag agtacttccg taaagcatta cccgacttaa gcacctttga agcttgctca
     2401 ttagcggcat ctgagaaggt gctttttcca ttctcaactc tgacattttt accacaattg
     2461 atacgggctt gaagttgctc attagtgagt tcactcgtag agcgattata tagctcctga
     2521 cacatcaaca taccgttacc taagcttgtc gtagtgttac cagtattctt tttactggta
     2581 gcaccaccat catttgtagt agctgtcttt ccagttgctg ctgaaatatc tgtttgacca
     2641 acaatagctt tgaagttaat ttcctgaaaa gttagctgga ttcttaggcc attagaaatt
     2701 ccaacatctt tagaggcttt aaagcttgta ataatggagt catcaatttt aattccatct
     2761 ttacagatga ctgaaataat ctgcttctgg tcacgccagc tttcaagagt gtcgatgaag
     2821 ttctccacca gcttattatc tcttgagata aggatactac cggattcacc aaccacaacc
     2881 acaccactaa tagtgattgt tctgggtgct ctttgaacat tatctgttac agtctgccct
     2941 gattgcatat tttgagtggt aaccatcata gggctgtcaa attccatgtt ttcagttgct
     3001 gatagtgaca agaaattatc tggttggcct tgtagatgaa agtaaacgcc atctttgcca
     3061 gtgtaacgaa gctgattagt gcaaatcatt aaattctcct ttgatttcaa agacttagtg
     3121 tattttaatc atttttaacc aagcctttga tatataagta ttttctctgt taagcgtgag
     3181 ctacgtaaat tctatttttc agtgggtata tctgttcaga agatttcacg tagcacacgg
     3241 atatataaga aatcattctt cctctggata gcttgaactt aagagcatat cctgcgtgaa
     3301 ctggtcatta gctgattgat tgaaagtaaa gaaagctggt tcatccggtc taacagttgc
     3361 ttcaccagtg atattaactg acaagggctt cttggcttct actgttaaag catcaacctt
     3421 gcgtgatagc tcactaatag tcattgcaag ttgagcatta ctattaacta tgtcacctgt
     3481 gatagctggt ggagttgatt gtgtgttatt tacgaagtta ttcatcggtt cttggaagtt
     3541 agcaatttta ttagctgcac tactaaacca acctttcaca tcgtccatag tgaacactgg
     3601 tttaagtcca gactctttag ctagctctgg taatttagct tgtgcttcca ttcgttcagg
     3661 tgtagaagct aatctttcat aacctgcata gatagcacta ccagctaata gcatattcat
     3721 agggtttagt cttgatggtt tcccattctt tctattcacg ttatccgctg tagtatcagc
     3781 gacctgacct aatcttgtga tagctgtcat aagcccgtaa atacttctgg ttacaccaac
     3841 aactttcttt acagcaataa caccagccaa gacttttaag ctattaatca agccagaacc
     3901 taaagcatca actactttct tttgttcatc ggttaaacca cgataagcca atgtcacctc
     3961 atcaaagaaa cctctcacc
//
LOCUS       DADMHC010000259         3821 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.262, whole genome shotgun sequence.
ACCESSION   DADMHC010000259 DADMHC010000000
VERSION     DADMHC010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3821)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3821)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3821
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.262"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..351
                     /locus_tag="JNZ57_003807"
     CDS             <1..351
                     /locus_tag="JNZ57_003807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch FliM family protein"
                     /protein_id="HAY8829844.1"
                     /translation="LPFSMIEPLRELLVNPPLENSRNEDQNWRDNLVRQVQHSQLELV
                     TNFADISLRLSQILKLKPGDVLPIEKPDRIIAHVDGVPVLTSQYGTLNGQYALRIEHL
                     INPILNSLNEEQPK"
     gene            348..761
                     /gene="fliN"
                     /locus_tag="JNZ57_003808"
     CDS             348..761
                     /gene="fliN"
                     /locus_tag="JNZ57_003808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HAY8829845.1"
                     /translation="MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAADAVFQQFGG
                     GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN
                     GYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR"
     gene            764..1129
                     /gene="fliO"
                     /locus_tag="JNZ57_003809"
     CDS             764..1129
                     /gene="fliO"
                     /locus_tag="JNZ57_003809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310713.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliO"
                     /protein_id="HAY8829846.1"
                     /translation="MNNHATVQSSTPVSAAPLLQVSGALIAIIALILAAAWQVKRLGF
                     APKRTGVNGLKISASASLGARERVVVVDVEDARLVLGVTAGQINLLHKLPPSAPTEEI
                     PQTDFQSVMKNLLKRSGRS"
     gene            1129..1866
                     /gene="fliP"
                     /locus_tag="JNZ57_003810"
     CDS             1129..1866
                     /gene="fliP"
                     /locus_tag="JNZ57_003810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310714.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HAY8829847.1"
                     /translation="MRRLLSVAPVLLWLVTPLAFAQLPGITSQPLPGGGQSWSLPVQT
                     LVFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMS
                     PVIDKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTGPLQ
                     GPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIA
                     LPFKLMLFVLVDGWQLLVGSLAQSFYS"
     gene            1876..2145
                     /gene="fliQ"
                     /locus_tag="JNZ57_003811"
     CDS             1876..2145
                     /gene="fliQ"
                     /locus_tag="JNZ57_003811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013365797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HAY8829848.1"
                     /translation="MTPESVMMMGTEAMKVVLALAAPLLLVALVTGLIISILQAATQI
                     NEMTLSFIPKIIAVFIAIIIAGPWMLNLLLDYVRTLFTNLPYIIG"
     gene            2154..2939
                     /gene="fliR"
                     /locus_tag="JNZ57_003812"
     CDS             2154..2939
                     /gene="fliR"
                     /locus_tag="JNZ57_003812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliR"
                     /protein_id="HAY8829849.1"
                     /translation="MMQVTSDQWLSWLSLYFWPLLRVLALISTAPILSERSVPKRVKL
                     GLAMMITFVIAPSLPANDVPVFSFFALWLAVQQILIGIALGFTMQFAFAAVRTAGEII
                     GLQMGLSFATFVDPASHLNMPVLARIMDMLALLLFLTFNGHLWLISLLVDTFHTLPIG
                     GEPLNSNAFLALTKAGSLIFLNGLMLALPLITLLLPLNLALGLLNRMAPQLSIFVIGF
                     PLTLTVGISLMAALMPLIAPFCEHLFSEMFNLLADIISELPLI"
     gene            3229..>3821
                     /gene="rcsA"
                     /locus_tag="JNZ57_003813"
     CDS             3229..>3821
                     /gene="rcsA"
                     /locus_tag="JNZ57_003813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator RcsA"
                     /protein_id="HAY8829850.1"
                     /translation="MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACD
                     SQRPSVVFINEDCFIHDASNSQHIKHIINQHPNTLFIVFMAIANVHFDEYLLARKNLL
                     ISSKSIKPESLDNILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISD
                     QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNV"
BASE COUNT          905 a          918 c          949 g         1049 t
ORIGIN      
        1 ctgccattca gcatgatcga gccgctacgg gaattgttgg ttaacccgcc gctggaaaac
       61 tcgcgtaatg aagatcagaa ctggcgcgat aacctggtgc gccaggtgca gcattcacag
      121 ctggagctgg tcaccaactt tgccgatatc tcgctacgcc tgtcgcagat tttaaaactg
      181 aaacccggcg acgtcctgcc gatagaaaaa cctgatcgca tcatcgccca tgttgacggc
      241 gtcccggtgc tgaccagtca gtacggcact ctcaacggtc agtatgcgtt acggatagaa
      301 catttgatta acccgatttt aaattctctg aacgaggaac agcccaaatg agtgacatga
      361 ataatccggc cgatgacaac aacggcgcaa tggacgatct gtgggctgaa gcgttgagcg
      421 aacaaaaatc aaccagcagc aaaagcgctg ccgacgcggt gttccagcaa tttggcggtg
      481 gtgatgtcag cggaacgttg caggatatcg acctgataat ggatattccg gtcaagctga
      541 ccgtcgagct gggccgtacg cggatgacca tcaaagagct gttgcgtctg acgcaagggt
      601 ccgtcgtggc gctggacggt ctggcgggcg aaccactgga tattctgatc aacggttatt
      661 taatcgccca gggcgaagtg gtggtcgttg ccgataaata tggcgtgcgg atcaccgata
      721 tcattactcc gtctgagcga atgcgtcgcc tgagccgtta gtgatgaata accacgctac
      781 tgtgcaatct tccacgccgg tttctgctgc gccactgctg caggtcagcg gcgcactcat
      841 cgccattatt gccctgatcc tcgctgctgc ctggcaggta aaacggttgg gatttgcccc
      901 gaaacgcact ggcgttaacg gtctgaaaat tagcgccagt gcttcgctgg gcgcgcgtga
      961 acgggttgtg gtggtcgatg tggaagatgc acggctggtg ctcggcgtta ccgcagggca
     1021 aatcaatctg ctgcataaac ttcccccttc agcaccaaca gaagagatac cgcagaccga
     1081 ttttcagtcg gtcatgaaaa atttgcttaa gcgtagtggg agatcctgat gcgtcgtttg
     1141 ttgtctgtcg cacctgtcct tctctggctg gttacgcccc tcgccttcgc gcaactgccg
     1201 ggtatcacca gccagccgct gcctggcggt ggacaaagct ggtcgctccc ggtgcagacg
     1261 ctggtgttca tcacctcgtt gacgtttatt ccggcaattt tactgatgat gaccagtttc
     1321 acccgcatca tcattgtttt tggtttattg cgtaacgcgc tgggaacgcc ctccgcgcca
     1381 cctaaccagg tattgctggg gctggcacta tttttgacct tttttattat gtcaccggtg
     1441 atcgacaaaa tttatgtcga tgcgtaccag ccattcagcg aagagaaaat atcaatgcag
     1501 gaggcgctgg aaaaaggggc gcagccgcta cgtgagttta tgctgcgtca gacccgtgag
     1561 gcagatttag ggttgtttgc cagactagcg aataccggcc cgttgcaggg acctgaagcc
     1621 gtgccgatgc gcattttgct cccggcctac gtgaccagcg agttgaaaac cgcatttcag
     1681 ataggcttca cgattttcat tccttttttg attatcgacc tggtgattgc cagcgtgttg
     1741 atggcattgg ggatgatgat ggtccccccc gccaccattg ctctgccctt taaactgatg
     1801 ctgtttgtac tggtggatgg ctggcaattg ctggtcggtt cgctggcgca gagcttttac
     1861 agctagagag gcaaaatgac acctgaatcg gtcatgatga tggggactga agcgatgaaa
     1921 gtcgtgctgg cactggctgc cccgctgttg ctggtggcgc tggtcacggg ccttatcatc
     1981 agtattttgc aggccgccac gcagatcaac gaaatgacgc tgtcgtttat tccaaaaatc
     2041 atcgccgtat ttattgccat tattattgcc ggaccgtgga tgctcaatct gttgctggat
     2101 tacgtccgca ccttgttcac taacctgccg tatatcatcg ggtaggccgt acaatgatgc
     2161 aggtgacaag cgatcaatgg ctttcctggt taagcctgta cttctggccg ttactgcgcg
     2221 tgctggcgct catttctacc gcaccaattc tgagcgaacg cagcgtgccg aaacgggtaa
     2281 aactggggct ggcaatgatg atcacgttcg tcattgcccc atcattacct gccaacgatg
     2341 ttcctgtttt ttcgttcttt gctctgtggc tggccgtgca gcagatcctg atcggcattg
     2401 cgcttggttt taccatgcaa tttgcctttg ccgctgtgcg aaccgctggc gaaattatcg
     2461 gtctgcaaat ggggctgtca tttgcgacgt ttgtcgatcc ggccagccat ctcaatatgc
     2521 ccgttttagc gcgtatcatg gatatgctgg cgttactgct gttcctgaca tttaacggtc
     2581 atttatggtt gatttcactg ctggtcgata cctttcacac cctgccaatt ggtggcgaac
     2641 cgttgaacag caatgcgttt ctggcactca ccaaagcggg gagtttgatt ttccttaacg
     2701 ggctgatgct ggcgttaccg ctcattactc tgctgctgcc cctgaatctg gcattaggtt
     2761 tactgaatcg tatggccccg caattatcca tttttgttat tggatttcca ttaactctga
     2821 ctgtcggtat ctctttaatg gcggcattaa tgccgttaat tgcacctttt tgcgaacatt
     2881 tattcagtga gatgtttaat ttgctggctg atattattag tgaattgcca ttaatataat
     2941 tccgtaacgt ttatcatgtt atcctaagga ttatccgaaa aataatacct acgaacatct
     3001 tccaggatac tcctgcggcg aaatatttgt tttaagctca ctcacatatc gcaacattta
     3061 ctttacttta agacaattcc aggcaaatta tacaacactt tacgggatag taagtccgcc
     3121 tgaaaaatcg cgagagtggc gcattaggtg acccatgttg ttccgtttag tcatgatgaa
     3181 atattcaggt aaggggaatt atcgttacgc attgagtgag ggtatgccat gtcaacgatt
     3241 attatggatt tatgtagtta cacccgacta ggtttaaccg ggtatctgtt gagtagaggg
     3301 gttaaaaaaa gagaaatcaa cgacattgaa accgttgatg accttgccat agcttgtgat
     3361 tcacagcgcc cttcagtggt gtttattaat gaggactgtt tcatccatga tgcttctaac
     3421 agtcagcaca tcaagcacat cattaatcaa catcccaata cgttatttat cgtttttatg
     3481 gcaattgcca atgttcattt tgatgaatat ctattggcca gaaaaaattt attgataagt
     3541 tctaaatcga ttaaaccgga atctctcgac aatatccttg gcgatattct gaaaaaagag
     3601 acaacgataa cctctttttt aaatatgccg acgttatcat tgagccgaac cgaatcgagt
     3661 atgttgcgaa tgtggatggc aggtcaggga accattcaaa tctctgacca aatgaatatc
     3721 aaagccaaga ccgtttcatc gcataaaggt aatattaaac gtaagatcaa aacgcataat
     3781 aaacaggtta tctaccatgt cgtccgactg acggataatg t
//
LOCUS       DADMHC010000260         3778 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.263, whole genome shotgun sequence.
ACCESSION   DADMHC010000260 DADMHC010000000
VERSION     DADMHC010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3778)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3778)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3778
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.263"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..1087
                     /gene="nadB"
                     /locus_tag="JNZ57_003814"
     CDS             <1..1087
                     /gene="nadB"
                     /locus_tag="JNZ57_003814"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HAY8829851.1"
                     /translation="VGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGD
                     GIAMAWRAGCRVANLEFNQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGTRFMPDF
                     DERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDL
                     TQEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLV
                     YGWSAAEDITRRMPDAHGVSTLPPWDESRVENPDERVVIQHNWHELRLFMWDYVGIVR
                     TTKRLERALRRINMLQQEIDEYYAHFRVSNNLLELRNLVQVAELIVRCAMMRKESRGL
                     HFTLDYPELLTHSGPSILSPGNHYINR"
     gene            complement(1072..1809)
                     /gene="trmN"
                     /locus_tag="JNZ57_003815"
     CDS             complement(1072..1809)
                     /gene="trmN"
                     /locus_tag="JNZ57_003815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417070.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(1)(Val)
                     (adenine(37)-N(6))-methyltransferase TrmN"
                     /protein_id="HAY8829852.1"
                     /translation="MSQSTSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAG
                     VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHT
                     ADIQQWLTQQTVRFDLIISNPPYYQQGVECAIPQREQARYTTTLDHPSLLTCAAECIT
                     EEGFFCVVLPEQIGNGFTELALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFS
                     DRLVIRGPDQNYSEAYTALTQAFYLFM"
     gene            1941..3275
                     /gene="srmB"
                     /locus_tag="JNZ57_003816"
     CDS             1941..3275
                     /gene="srmB"
                     /locus_tag="JNZ57_003816"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase SrmB"
                     /protein_id="HAY8829853.1"
                     /translation="MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDV
                     LGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKH
                     THLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEAD
                     RMLDMGFAQDIEHIAGETRWRKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRE
                     RKKIHQWYYRADDLEHKTALLVHLLKQPEATRSIVFVRKRERVHELANWLREAGINNC
                     YLEGEMVQGKRNEAIKRLTEGRVNVLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLH
                     RIGRTARAGRKGTAISLVEAHDHLLLGKVGRYIEEPIKARVIEELRPKTRTPSEKQTG
                     KPSKKVLAKRAEKKKAKEKEKPRVKKRHRDTKNIGKRRKPSGTGVPPQTTEE"
     gene            complement(3484..>3778)
                     /locus_tag="JNZ57_003817"
     CDS             complement(3484..>3778)
                     /locus_tag="JNZ57_003817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311470.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8829854.1"
                     /translation="FRQIFESTLRQRRITVENTIELLSIESIKRCVAANIGVSYLPRF
                     AVEKELESGELIELPFGEQSQTITAMCAHHAGKAVSPAMHTFIQCIEECFLPG"
BASE COUNT          942 a         1031 c          990 g          815 t
ORIGIN      
        1 tgtaggcgcg tgggtatgga accgaaataa agaaacggtg gaaacctgcc acgcaaaagc
       61 agtggtactg gcaaccggcg gtgcgtcgaa ggtgtatcag tacaccacca atccggatat
      121 ttcttctggc gatggcattg ctatggcgtg gcgcgcgggc tgtcgggttg ccaatctcga
      181 atttaatcag ttccacccta ccgcactgta tcacccacag gcacgcaatt tcctgttaac
      241 ggaagcactg cgcggcgaag gcgcttatct caagcgcccg gatggcacgc gttttatgcc
      301 cgattttgat gagcgcggcg aactggcccc gcgcgatatt gtcgcccgcg ccattgacca
      361 tgaaatgaaa cgcctcggcg cagattgtat gttcctcgac atcagccata agcccgccga
      421 ttttattcgc cagcatttcc cgatgattta tgaaaaattg ctcgggctgg ggattgatct
      481 cacacaagaa ccggtaccga ttgtgcctgc tgcacactat acctgcggtg gtgtaatggt
      541 tgatgatcat gggcgtacgg acgtcgaggg cttgtatgcc attggcgagg tgagttatac
      601 cggcttacac ggcgctaacc gcatggcctc gaattcattg ctggagtgtc tggtctatgg
      661 ctggtcggcg gcagaagata tcaccagacg tatgcctgat gcccacggcg tcagtacgtt
      721 accaccgtgg gatgaaagcc gcgttgagaa ccctgacgaa cgggtagtaa ttcagcataa
      781 ctggcacgag ctacggctgt ttatgtggga ttacgtcggc attgtgcgca caacaaaacg
      841 tcttgagcgc gccctgcggc gtatcaatat gttgcaacag gaaatagacg aatattacgc
      901 ccacttccgc gtgtcgaata atttgctgga gctgcgtaat ctggtgcagg ttgcggaatt
      961 gattgttcgc tgtgccatga tgcgcaagga gagtcgtggc ctgcatttca cactggatta
     1021 tccggaactg ctcacccatt ccggtccgtc gatcctttcc cccggcaatc attacataaa
     1081 cagataaaaa gcctgggtca gcgccgtata cgcttcggaa tagttctggt ctggcccacg
     1141 aatgactaag cgatcgctaa agcattctcc cgcctgcggg gagaatgcca gcagcacccg
     1201 atgcggcagt cgcgcttcgt tttccgccac atccgtccgc aaacgtaaat gccagcccat
     1261 gcttaatgcc agctccgtaa aaccattacc aatctgctct ggcagcacta cgcagaaaaa
     1321 tccctcttcg gtaatgcact ccgccgcaca ggtcagcagc gatgggtgat caagcgtagt
     1381 ggtatagcga gcctgttccc gttgagggat cgcgcactct actccctgct gatagtaagg
     1441 tgggttactg atgattaaat cgaagcgtac tgtctgctgt gtgagccact gctgaatatc
     1501 cgccgtatgg acgttaatcc gctctgccca cggggactgg ttgatatttt cctgcgcctg
     1561 cgcggcagct tcactttcca gctcaacggc atcaattatc acgctgtcac tggttcgctg
     1621 cgccagcatc agtgccagca acccgctacc cgcgccgata tcaaggcaac gtttcacccc
     1681 agccaccggt gcccatgcgc ccagcaaaat gccatccgtt cccactttca tcgcacagcg
     1741 atcgtgagca acaaaaaact gtttaaaagt aaatccatta cgacgaagca cggatgtaga
     1801 ctgtgacatg aaaataaaac cttgcaggaa aaacggcgat agcaccgggt gagaacaata
     1861 cccgagaagc gatatccata caaacagatg aagattgcag ccgtaacgtc tataatcagc
     1921 gccccacaca gaggtagaac atgactgtaa cgactttttc cgaacttgaa ctcgacgaaa
     1981 gcctgctgga agccctccag gataaaggtt tcactcgccc gaccgccatt caggctgccg
     2041 ccattccgcc tgcgctcgat ggccgtgatg tactcggttc tgcgccgaca ggcaccggta
     2101 aaacggcggc gtatctgctg ccagcgttgc agcacctgct cgatttcccg cgtaagaaat
     2161 ccggtccgcc gcgtattttg atcctcaccc caactcgcga gctggcgatg caggtggccg
     2221 atcatgcccg cgaactggcg aaacatacgc atctggatat cgccaccatt accggcggcg
     2281 tagcctatat gaaccacgcg gaagtgttca gcgaaaatca ggacatcgtg gtcgccacga
     2341 ccggacgtct gctgcaatac ataaaagaag agaacttcga ttgccgcgcg gttgaaacgc
     2401 tgatcctcga cgaagcagac cgtatgctgg atatgggctt cgctcaggat atcgaacata
     2461 ttgctggcga aacgcgctgg cgtaaacaga ccctgctctt ttcggcaacg ctggaaggcg
     2521 atgcgattca ggactttgcc gagcgtctgc tggaagatcc ggtggaggtt tctgccaatc
     2581 cgtccacccg tgagcgcaaa aaaattcatc agtggtatta ccgcgccgat gacctggaac
     2641 ataaaaccgc attgctggtg catctgttaa aacagccgga agcgacccgc tcaattgtgt
     2701 ttgtgcgtaa gcgtgaacgt gtgcatgagc tggcaaactg gctgcgcgaa gcgggcatca
     2761 acaactgcta tctcgaaggt gagatggtac agggcaagcg taatgaagcg attaaacgcc
     2821 tgaccgaagg ccgcgtaaac gtactggtag caaccgatgt tgccgcgcgc ggtatcgaca
     2881 ttccagacgt cagccacgtc tttaacttcg atatgccgcg cagtggtgat acttatttgc
     2941 accgtatcgg acgtaccgcg cgcgccggtc gtaaaggcac cgcgatttcg ctggtggaag
     3001 cccatgacca tctgctgctt ggcaaagttg gccgttatat tgaagagccg ataaaagctc
     3061 gcgtcattga ggaactacgc ccgaaaacgc gtacgccaag cgagaagcag accggcaagc
     3121 catcgaagaa agtactggca aaacgcgccg agaagaaaaa agctaaagag aaagagaagc
     3181 cgcgggtgaa aaaacgccat cgcgacacca aaaatattgg taagcgccgt aaaccgagcg
     3241 gaacgggcgt gccaccgcaa acgacagaag agtaatctta attccgggtt taagcccgga
     3301 attaaaagtg ctggcaaacg caaaactgcc tgatgcgcta cgcttatcag gcctacatgg
     3361 ctcatgcaat atattgaatt tgcacgatct tgtaggccgg ataaggcgtt cacgccgcat
     3421 ccggcatgaa caaaacgcac ttcgtcgaca agttgggtgc cgggtttaag cccggcatta
     3481 tttttatccc ggcaaaaaac actcttcaat acactgaata aaagtgtgca tcgccgggct
     3541 aaccgctttt ccagcatggt gtgcgcacat ggccgtaatg gtctgcgact gttcgccaaa
     3601 aggcaattca attaattctc cgctctcaag ctctttttcc accgcaaagc ggggcaagta
     3661 actgacaccg atattcgccg cgacacaacg tttgatactt tcaatgctta acagctcaat
     3721 ggtgttttcc accgtgatcc gccgctgacg cagcgtgctc tcaaatatct gccggaag
//
LOCUS       DADMHC010000261         3757 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.264, whole genome shotgun sequence.
ACCESSION   DADMHC010000261 DADMHC010000000
VERSION     DADMHC010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3757)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3757)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3757
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.264"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(74..292)
                     /gene="osmB"
                     /locus_tag="JNZ57_003818"
     CDS             complement(74..292)
                     /gene="osmB"
                     /locus_tag="JNZ57_003818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotically-inducible lipoprotein OsmB"
                     /protein_id="HAY8829855.1"
                     /translation="MFVTSKKMTAAVLAITLAMSLSACSNWSKRDRNTAIGAGAGALG
                     GAVLTDGSTLGTLGGAAVGGVIGHQVGK"
     gene            complement(561..1310)
                     /locus_tag="JNZ57_003819"
     CDS             complement(561..1310)
                     /locus_tag="JNZ57_003819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY8829856.1"
                     /translation="MNSRQQTILQMVIDQGQVSVTDLAKATGVSEVTIRQDLNTLEKL
                     SYLRRAHGFAVSLDSDDVETRMMSNYTLKRELAEFAASLVQPGETIFIENGSSNALLA
                     RTLGEQKKNVTIITVSSYIAHLLKDAPCEVILLGGVYQKKSESMVGPLTRQCIQQVHF
                     SKAFIGIDGWQPETGFTGRDMMRTDVVNAVLEKECEVIVLTDSSKFGAVHSYSIGPVE
                     RFNRVITDSKIRASDLMHLEHSKLTVHVVDI"
     gene            complement(1400..1573)
                     /locus_tag="JNZ57_003820"
     CDS             complement(1400..1573)
                     /locus_tag="JNZ57_003820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829857.1"
                     /translation="MSEFDAQRVAERIDIVLDILVAGDYHSAIHNLEILKAELLRQVA
                     ESTPDIPKAPWEI"
     gene            complement(1720..3705)
                     /gene="pdeR"
                     /locus_tag="JNZ57_003821"
     CDS             complement(1720..3705)
                     /gene="pdeR"
                     /locus_tag="JNZ57_003821"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic di-GMP phosphodiesterase"
                     /protein_id="HAY8829858.1"
                     /translation="MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTL
                     QLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINNREWAGNASAWHDTPAV
                     ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF
                     MSRREAAASRRNNRVFFRSGNAYKVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLIC
                     SGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDN
                     FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMA
                     SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF
                     CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPER
                     GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQT
                     IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGPGY
                     SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKD
                     DAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA"
BASE COUNT         1020 a          906 c          856 g          975 t
ORIGIN      
        1 tattcagtta tttcgtactg aacaaaatca agcgtattat aattgcgagt cgataatcga
       61 catttattta cgattattta ccgacctggt gaccaataac accaccgaca gctgcaccac
      121 ctaatgtacc caacgtactg ccatcggtca gtactgcacc gcctaatgcc cctgcacccg
      181 cgccgattgc ggtgttgcgg tcccgtttag accagttaga acaggcactc agagacattg
      241 ccaaagtaat tgccagaaca gccgcggtca tttttttgct cgttacaaac ataatactct
      301 ctcctgaatt tatgattcac ggaagtaagc tctctataac tataatagct aagaataagc
      361 ctggtgaaat tattccgtga aatctgctcg cgcgcagggt tatatcacgc aggtgataat
      421 gacttcctgt tatatcgctg ataataattt tatatcttaa gcgtgttaat aacaggtaaa
      481 tagtcttaat tatcaaccag gaatcatctt agagcggatg atttgccaaa ctgcaaatca
      541 tccgtagaga agggaaatgg ttaaatgtca acgacgtgaa cggtgagttt actgtgctca
      601 agatgcatca gatcgctggc gcgtattttc gaatcggtaa tcacgcgatt gaatcgctca
      661 acgggaccga tggagtatga atgtacagca ccaaatttcg agctgtcagt caggactatc
      721 acttcgcact ctttttccag cacggcattg accacatcgg tacgcatcat atcgcgaccg
      781 gtgaatccag tttcaggttg ccagccatca ataccaataa atgctttgct gaaatgcacc
      841 tgctggatgc actggcgtgt caacgggcca accatacttt cgcttttttt ctggtacacg
      901 ccaccgagca aaatgacttc acaaggcgcg tctttcagca aatgcgcgat gtagctgctg
      961 accgtgatga tagtgacatt tttcttctgc tcccccagag tccgggcgag cagggcattg
     1021 ctgctgccat tttcgataaa gatggtttcg cccggttgaa ccagtgacgc ggcaaactcg
     1081 gcgagttcac gcttcagcgt atagttgctc atcatacggg tttcgacgtc atcactatca
     1141 agcgaaactg caaagccatg tgcacggcgg aggtaactca gtttttcgag ggtgttgaga
     1201 tcctggcgaa tggtaacttc agaaactcca gtggcttttg ccagatcggt tacgctaacc
     1261 tgaccctggt caatgaccat ctgtagaata gtttgttgtc gggaattcat cgctgtaatt
     1321 cttataacgt tataatacta aataaaaaaa tactgacgcg ccgggcatcc tcaaatagga
     1381 aaacctgaag gcacgattgt taaatctccc acggtgcctt cgggatgtct ggcgtagatt
     1441 cagcaacctg gcgcaagagt tctgctttaa gtatctcgag attatggatc gcagagtggt
     1501 aatcgcctgc cacaaggata tctaacacaa tatcaatacg ttcggcaacg cgctgggcat
     1561 caaattcaga catcaaggac atccttatag caaaagtgga aaatgaataa tgcaaaaatt
     1621 gccgctaaaa gagaagtgtt taacagcaac ggctaattat catctaggaa tacgatatat
     1681 aatgacggga tatagcgcta agtatatata ttcatctact tatgcgcgct tcagatagcg
     1741 tttataccag cgttcgaagg cgacggcggg catcggtttg gcaaacaaaa atccttgccg
     1801 ctcattgatc ccgttcttgg ttaaaaaagc atcgtccttt gcactctcta caccttcggc
     1861 gatcacctga agattcaatg cctgggccac agcgacgatc gcccggacca gtgactgcga
     1921 gacaggttgt ttgtgaatat ctcgaacaaa aacctggtca agtttgatgg catcgatcgg
     1981 aaagcgcgcc agttgcgaaa gtgaagagta gccgggacca aaatcatcca gatgcacttg
     2041 cgcacctagt tggctaaatt gttgaataac agacagtgcc agttcatcat tctcaatcag
     2101 acaactctct gtcagttcaa catctatagg gcagtattca aaattgagtt cctggagaac
     2161 ctgtttcagg gcggtgaaaa tggtttgatc ggcgagctga cgtgcagaaa tatttaccgc
     2221 cactcgcagg tttatgcctt tatcccgcca ctttgccacc tggcgtacga catcgagaat
     2281 cacccaacgg cctaaaggca caattagccc tgactcttcg gcgtaggaaa tgaagtccaa
     2341 cggtggaatc aacccacgtt caggtgactg ccaacgtact agtgcttcca gactgcgcac
     2401 ttcgccacgc caggtgattt tcggttgata gtgaataacc aactgatcgt tttccagtgc
     2461 tttacgcaag ttggtatcca gccagagata ttcaaatacc cgttgattca tttctggggt
     2521 aaaaacgcaa aattgtcctc gtccgccttc cttcgctgtg tacattgctg tgtcggcgtg
     2581 acgaataata gccgtgctgt ctgaaccatg ttcgggagag agtgcaatac ctactgaaca
     2641 gctggtataa acttcaatta aaccaatgcg aaaggggagc cgtaagcggg tcaaaattcg
     2701 tgatgccatt gcttccagcg cgctttgtga ggtgttggat gccagtacca gaaactcatc
     2761 cccacctgga cgcgccaaca cctggtcatg ttcgagacag cttaaaatag ccaatgacac
     2821 gtcgcgtaat aactggtcac caaacaaatg cccataggcg tcgttgacct ttttgaaatt
     2881 atccaaatca agatacacaa ccccaacttt attgttatct gcatgattaa tagcgtgatc
     2941 gattaaatcc tgcattgcgt tacgattcgg cagtccggtg atactgtcgg tatttgccag
     3001 aatacgcagt cgctcctgag cgcggcgctc ttcggtaatg tcggtgccgg aacagattaa
     3061 aaaaatctcg tttttgccac tgccgctgtg gacaaattta ttgcgaaaca gaaacagccg
     3121 ctggccttta catgttggta tccacagttc gactttatat gcattgccgc ttcgaaaaaa
     3181 tacacggtta ttgcgcctgg atgccgcagc ttcacgacgg ctcataaaca gtttaaacac
     3241 gctttggcca atgacgtcgt gttctttcaa cccagtgtaa tcttcacata accgattgaa
     3301 gcgttggata ttcccccggc tgtcgagaat cactattgcg gaatgtgctt cagaaactac
     3361 ctgctcagca aaggaaagcc cgtgtgataa atcacgagca actgccggtg tgtcatgcca
     3421 tgcagacgcg ttgccagccc attcccggtt attgattttt cgtcctacca gatgcacaga
     3481 aagatcgctc tcatcgacgg tcagactcat catcaggctg gaggtgatga ccgtcatttc
     3541 cctgatgcga gcagcctgtt cggcagataa ctgcaaagta cgatcaggtt ctgtggtttc
     3601 ggtggtagaa aagcgcaaaa catcgctgct ttccgtcaac cgccagtatg gattgtgcga
     3661 tccgagaaag ttgtacaacg ttgtggactc cctaacggtt ttcatgatgc atatcctccg
     3721 gttaacagcg gagtccgcgg ttaaataaaa ggaacaa
//
LOCUS       DADMHC010000262         3737 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.265, whole genome shotgun sequence.
ACCESSION   DADMHC010000262 DADMHC010000000
VERSION     DADMHC010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3737)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3737)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3737
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.265"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..272
                     /locus_tag="JNZ57_003822"
     CDS             <1..272
                     /locus_tag="JNZ57_003822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416627.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1307 domain-containing protein"
                     /protein_id="HAY8829859.1"
                     /translation="SIGATTKEDAAKTLEPLSAKYKNIAGVEEKLTYTDTYAQENVTI
                     DMEKVDFKALQGISGINVSAEDTKKGITMAQMELVMKAAGFKEVK"
     gene            complement(313..783)
                     /locus_tag="JNZ57_003823"
     CDS             complement(313..783)
                     /locus_tag="JNZ57_003823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1456 family protein"
                     /protein_id="HAY8829860.1"
                     /translation="MLSNDILRSVRYILKANNNDLVRILALGNVEATAEQIAVWLRKE
                     DEEGFQRCPDIVLSSFLNGLIYEKRGKDESAPALEPERRINNNIVLKKLRIAFSLKTD
                     DILAILTEQQFRVSMPEITAMMRAPDHKNFRECGDQFLRYFLRGLAARQHVKKS"
     gene            complement(830..1549)
                     /gene="yehT"
                     /locus_tag="JNZ57_003824"
     CDS             complement(830..1549)
                     /gene="yehT"
                     /locus_tag="JNZ57_003824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310963.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BtsR"
                     /protein_id="HAY8829861.1"
                     /translation="MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVH
                     KLRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKP
                     IDEERLEKTLARLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRM
                     SGIYVTSHEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILR
                     NGLTVPVSRRYLKTLKEAIGL"
     gene            complement(1546..3231)
                     /gene="btsS"
                     /locus_tag="JNZ57_003825"
     CDS             complement(1546..3231)
                     /gene="btsS"
                     /locus_tag="JNZ57_003825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulatory system sensor histidine
                     kinase BtsS"
                     /protein_id="HAY8829862.1"
                     /translation="MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKF
                     LCYIVFSIFCIMGTWFGLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSM
                     GGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILA
                     IARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAAS
                     TEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHIPGKPISST
                     YTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNR
                     LFSSINRTLGEGIAQLLSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIK
                     AVSRRDSEQASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQV
                     NIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHLMLEIEDNA
                     GLYQPVTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTRITLRLPWRDEA"
     gene            3453..3518
                     /locus_tag="JNZ57_003826"
                     /pseudo
     CDS             3453..3518
                     /locus_tag="JNZ57_003826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416631.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family DNA-binding transcriptional
                     regulator"
BASE COUNT          998 a          969 c          859 g          911 t
ORIGIN      
        1 cctctattgg tgcaaccacc aaagaagacg ctgccaagac acttgagccg ttaagcgcca
       61 aatacaaaaa catcgcgggt gttgaagaaa aattaaccta taccgatacc tacgcgcagg
      121 aaaacgtgac tatcgatatg gaaaaagtgg attttaaagc cctgcagggt atttcaggaa
      181 tcaacgtttc tgctgaagat accaaaaaag gtatcactat ggcgcaaatg gaactggtga
      241 tgaaagccgc tggttttaaa gaagtgaaat aatctgtcgg cggccatgtt tcgcatggcc
      301 gccatacccg tcttagcttt tcttcacatg ctggcgcgct gccagtccac gcagaaaata
      361 acgtaaaaat tgatcgccgc attcgcggaa gtttttatga tccggtgcac gcatcatcgc
      421 cgtaatttcc ggcatcgaaa cgcggaactg ctgttcggtg aggatcgcca gaatgtcatc
      481 ggttttcagc gaaaacgcga tgcgtaattt ttttagcacg atgttgttat taatgcgacg
      541 ttccggctcc agtgccggag cagactcatc cttgccgcgt ttttcataaa tcaggccatt
      601 gaggaatgac gacaaaacaa tgtccggaca acgctgaaaa ccctcttcgt cttctttacg
      661 tagccagacg gcgatctgtt ccgcggtggc ttcgacatta cccagcgcca gaatacgcac
      721 caggtcatta ttattggctt tcaaaatgta gcgcacgctg cgcagaatat cgttacttag
      781 catgaggcct tcaggtgttg atgaggcaaa aagccatttt agcagtcttt tacaggccaa
      841 tcgcctcttt taaggttttc agataacggc ggctgaccgg cacggttaag ccattacgca
      901 aaatcaactc ggcctggccg ttatcttcca gacgaatctc ctgtaaatgc gcgaggttaa
      961 ccagatactg acgatggcag cgcagtagtg gtgtacgact ttccagggta cgtaatgtca
     1021 attcggtaaa gccctctttc ccttcgtggc tggtaacgta gataccgctc atccgactgc
     1081 tgacaaatgc cacatctttc atttgcagca aataaatccg actatgccca gtacaaggga
     1141 taaatttcag cgcctgttga ttttctggta acagcgaaac atcctgcttg ctgcgttcct
     1201 gccgcaaacg cgccagcgtt ttctccagtc gctcttcatc aattggcttc agcagataat
     1261 caaaggcgtg ttcttcaaag gctttaatgg cgtattcgtc aaacgcggtg agaaaaacaa
     1321 tatacggacg atgttccggg tcgagcatcc ccaccatttc cagaccactg atgcgcggca
     1381 tctggatatc gagaaacagc acatccgggc gcagtttatg caccgcgccg atcccttcca
     1441 cggcgtttga acactcacca acgatttcaa tatcgctctg ctcctgcaaa aatacgcgca
     1501 ggttctcccg tgctaacggt tcatcatcga caattaagac tttaatcatg cctcgtccct
     1561 ccatggtagt cgtaacgtta ttcgggtgta actatcaggc tcacaggcga cgcttatccc
     1621 atagtcatcg ccaaaccgtt cacgtaaacg cttatccacc agattcatcc ccagcccact
     1681 ggcattggtt accggttgat acaaaccggc attgtcttcg atctccagca tcaaatgttg
     1741 cccctcacgt cgggcgctga ttgccactcg ccctgtatcc agcagttgtg atgtcccatg
     1801 tttaatggcg ttttccacta tcggttgcag ggtaaacgcg ggcaattgct gctgggataa
     1861 ttcttgcgga atagcaatgt tgacctgcaa ccgcgactgg aagcgcgcct tttcaatttg
     1921 cagataagcg ttcacatgtt caatttcgtc ggcgagagta acaaactccg aaggccgctt
     1981 taagtttttg cggaaaaaag tggaaagata ctgcaccagc tggctggcct gttcgctgtc
     2041 gcgacggctc accgctttaa tggtgttaag cgcattaaac aaaaaatggg ggttcacctg
     2101 ggcgtgaagc agtttgatct ctgactgggt gagcatcgct ttttgccgct catattgccc
     2161 ggcgaggatc tgcgccgaaa gcagttgcgc aatcccctcg cccagcgtgc ggttgattga
     2221 actgaataaa cggtttttgg cttcatacaa tttgatggtg cccatcaccc gctgattttc
     2281 accacgcaac ggaattacca gcgtcgaccc cagtttgcat tgcggatgca aagagcaacg
     2341 ataaggtact tcgttgccat cagcgtagac cacttcaccg gtttcaatcg cttttaaggt
     2401 gtaagtcgaa gatattggtt tgccgggtat atggtggtcg tcaccaattc cggtaaaggc
     2461 cagcaatttc tctcgatcgg taatcgcgac tgcaccaata tccagctcct gatacagcac
     2521 ctgtgccact ttcatgctgt tcacttcgtt aaacccctgg cgcaaaatgc cttccgtcga
     2581 ggcagccact ttcagcgcag tggcagaaaa agccgaagtg tatttttcaa acatcgcgcg
     2641 tttatctagc aatatacgca taaacagcgc cgcgccgacg gtattggtga ccatcattgg
     2701 cgcagcaata ttactcacca gacgcaccgc atcttcataa ggtcgggcga tcgccaggat
     2761 gatcaacatt tgcaccattt cagcgacgaa cgtgacggca ccggcggtaa tggggttaaa
     2821 gactttatca gtgcgcccgc gacggatcag gatgctgtgt accaggccgc cgagcaatcc
     2881 ttcaacgatg gtcgagatca tgcaacttag cgcggtcatg ccccccatcg aatatcgatg
     2941 taacccgccg gtcaggccaa ccagcccacc gacgaccgga ccgccgagta agccgcccat
     3001 gaccgcgcct atcgcacggg tattggcaat agaatcgtca atgtgcaacc caaaccaggt
     3061 gcccatgatg cagaagatgg aaaagacgat gtagcagaga aatttatgcg gcagacgaac
     3121 cgtgacctgc attaacggta tgaataatgg cgttttactc attaaccatg caatgactaa
     3181 aaaaacgcac atctgctgaa gcagcagcaa caccagatta aaatcgtaca tacccgcaaa
     3241 ccacacttcc ctttaaaacg cgtaacatat attgcctgcg tttaactttc tttgaactct
     3301 tgcagaaaaa tgagaattcg tgagtacaat cactcaaaat cgcctggcaa aaataaaatc
     3361 accctataaa tgcacaaaaa acgggcaaaa ctacctggtt cgcaaaactg cgtctaaagt
     3421 taaaccggga cctcgcgagc aagggtgaga cgatggcgct ttacacaatt ggtgaagtgg
     3481 cgttgctttg tgatattaac cctgtcacgt tacgcgcgtg acgcaacatt tttaaaaatc
     3541 gacgaagatc gtccaggagc gccgtttttc aagggttgga tagatgattc gtttaccatg
     3601 tcgacgaact tcgacgaatt tcgccgataa aaagtgtccc atacatgccc cattgatgcc
     3661 ccataaacaa tatcaggaat tgacactggt tatccataca gataaaaata acacctgtac
     3721 ataactacag ttacagg
//
LOCUS       DADMHC010000263         3725 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.266, whole genome shotgun sequence.
ACCESSION   DADMHC010000263 DADMHC010000000
VERSION     DADMHC010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3725)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3725)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3725
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.266"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            37..264
                     /locus_tag="JNZ57_003827"
     CDS             37..264
                     /locus_tag="JNZ57_003827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HAY8829863.1"
                     /translation="MRLIVVSIMVTLLSGCGSIISRTIPGQGHGNQYYPGVQWDVRDS
                     AWRYVTILDLPFSLVFDTLLLPIDIHHGPYE"
     gene            complement(265..639)
                     /locus_tag="JNZ57_003828"
     CDS             complement(265..639)
                     /locus_tag="JNZ57_003828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309456.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secY/secA suppressor protein"
                     /protein_id="HAY8829864.1"
                     /translation="MTMYATLEEAIDAAREEFLADNPGIDAEDANVQQFNAQKYVLQD
                     GDIMWQVEFFADEGKEGECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGE
                     FQLEPPLDTEEGRAAADEWDER"
     gene            complement(722..1946)
                     /gene="mdtG"
                     /locus_tag="JNZ57_003829"
                     /pseudo
     CDS             complement(722..1946)
                     /gene="mdtG"
                     /locus_tag="JNZ57_003829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415571.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtG"
     gene            complement(2117..3037)
                     /locus_tag="JNZ57_003830"
     CDS             complement(2117..3037)
                     /locus_tag="JNZ57_003830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpxL/LpxP family Kdo(2)-lipid IV(A)
                     lauroyl/palmitoleoyl acyltransferasee"
                     /protein_id="HAY8829865.1"
                     /translation="MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGL
                     GKLALRFMKRRAKIVHRNLELCFPEMSEQERRKMVVKNFESVGMGLMETGMAWFWPDR
                     RIARWTEVIGMEHIRDVQAQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPL
                     IDWLQTWGRLRSNKSMLDRKDLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQ
                     AATTTGTWMLARMSGACLVPFVPRRKPDGKGYQLIMLPPECSPPLDDAETTAAWMNKV
                     VEKCIMMAPEQYMWLHRRFKTRPEGVPSRY"
     gene            3262..>3725
                     /locus_tag="JNZ57_003831"
     CDS             3262..>3725
                     /locus_tag="JNZ57_003831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
                     /protein_id="HAY8829866.1"
                     /translation="MPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKATRDA
                     LYQLFTALNVFGRVYLAHEGINAQISVPASNVETFRAQLYAFDPALEGLRLNIALDDD
                     GKSFWVLRMKVRDRIVADGIDDPHFDASNVGEYLQAAEVNAMLDDPDALFID"
BASE COUNT          917 a          952 c          944 g          912 t
ORIGIN      
        1 cgttatgccg gtattttttt acggaagagg tatcaaatgc gtttaattgt ggtgagcatc
       61 atggtgacct tgctgagtgg ctgtggcagc attattagtc gcactatacc ggggcagggg
      121 catggcaacc aatattatcc cggtgtgcaa tgggatgtgc gtgactccgc ctggcgttat
      181 gtcacaatcc ttgatctgcc attctccctg gtttttgata ctttactgct gccgatcgac
      241 attcatcatg gcccgtatga gtgattaacg ttcatcccac tcatcagctg ctgcgcgtcc
      301 ttcctcggta tccagcggtg gctcaagctg aaattccccc tcgtcccatt catgtaatgt
      361 attctcttcc tgccactcct ggcgtatctc tatctcatca tagtcgccat caaaaacact
      421 ttgcgcggct tcaccgctaa gcataggtaa acattcacct tctttccctt cgtcggcaaa
      481 aaactcaact tgccacatga tgtcgccgtc ctgcaaaacg tatttttggg cattgaactg
      541 ttgcacattc gcatcttcgg cgtcgatgcc ggggttgtct gcaagaaatt cttcgcgtgc
      601 agcgtcaatg gcttcttcaa gcgttgcgta catggtcatc acgattctcc ctttgagttg
      661 atgaggtttc agggaaaagg atagctgatt ctccgctttt gcaagtatga aaggcgaaaa
      721 atcagttcga tacctggggt attcgacgac gacgtagact gttccatgaa tagactgcgt
      781 tgaataacac tacgccagcg gtgacgagaa ataccgctct gaaaccgtag ttcgctgaaa
      841 tcgctgctcc catcaatggt ccggtaacgt tgccaatatc acgaaacgat tggttatagc
      901 tgaagatacg cccggcgatc tggttgctcg agttgtaaac caacaatgtc tgtacggcgg
      961 ggagtagtgc accatcggcg gcaccgagca aaaaacgtaa aatcccaagt tgcaatggcg
     1021 tctgaacgta agacattggg atcaacagca gtacagaaaa gatcagcgct gtaatcagaa
     1081 tcttttcggg tccgattcga tcgccaagtt tgccgagtcg tggtgcactt agcagagccg
     1141 ccacgcctgg caccgaggcg atcatgccac tgataaaggc gacgttactg acgttacccg
     1201 ccagttcgcg gacatacagc gtcagaatgg gggcaattga gcccgtcgcc acctggatga
     1261 ttaacgtagt gacaaacagg ctgagtacca gtttcgggtt tttaagtgat gtcaccactt
     1321 cccgcatgtg cagcatctct tttttgctga ccggctggaa tttttctctg atgcaaaaca
     1381 gggtgacgaa aaagcagagt atgagcacac tggcggtaat aaagaatacc ggacgtaagc
     1441 cgtagctatc ggcgagcagg ccgccagcca ttgggccgag caacgcacca ccaacgccgc
     1501 ctgtggagag cgtacccagc gcccagccgc ttttattacg cggtacttgt gtggcgataa
     1561 gagcattagc gttggggaca aatccgccaa gtaacccaag aagcgcccgc aggatcaaaa
     1621 actgccagat attttgtgcc agccccatca acaccatcac gatgcccatg ccgagggcag
     1681 agcgtaatag catgagtttt cggcctttac ggtcggcgag tccaccccaa aacggtgagg
     1741 cgatggccga aaataaaaat gtaatgctga agacaatacc ggaccatatt cagggcggag
     1801 tgaccggtaa cgccaagctg ctcaacgtag aggggtaaga agggcattac cagactgaag
     1861 gcggcaccgg taagaaaaca gcctagccag gcgacgatca ggtttcgttt ccagtttata
     1921 ggggtgtcat tttcacaggg tgacatagca atccgctgtt ggtgcgccag gcgcggtgaa
     1981 cataagaaga aaagataagc acactaatta tgcgcccgac tcccaggggc gcaatccaga
     2041 gagcttttat cgctaaatca gggggatttg ctgtggtaat gccggatgcc attctgaagc
     2101 atccggcagg ggagatttaa tagcgtgaag gaacgccttc cgggcgtgtt ttaaagcgac
     2161 ggtgtaacca catatactgc tctggtgcca tcatgatgca tttttcgacc actttgttca
     2221 tccacgcggc ggtagtttcg gcatcatcca gtggcggaga acactctggc ggcagcataa
     2281 tcaattgata ccctttgcca tctggcttac ggcgtggaac gaagggcacc agacatgcgc
     2341 cggacatccg tgccagcatc caggttccgg tcgtggtcgc agcctgctca acggcaaata
     2401 acgggacgaa aacgcttgag cgcgggccgt aatcatgatc cggtgcgtac cagaccactt
     2461 cgcctttttt cagggcttta atcatgcctt ttaaatcttt gcggtcgagc atcgatttat
     2521 ttgagcgcaa acggccccag gtttgtagcc agtcaatcag tggattatcg ttcgggcggt
     2581 aaacgccaat ccccggttcc tgcataccaa actgccgcgc acccagctcc agtgtcagaa
     2641 aatggatgcc aactaacagg atgccgcgtt tttgcgcctg cacgtcacga atgtgttcca
     2701 tgccgatcac ttccgtccag cgggcgattc ggcggtccgg ccagaaccac gccatgccgg
     2761 tttccatcag gcccatgcca acggattcga aattcttcac caccatttta cggcgttctt
     2821 gttcgctcat ttccgggaag cacagttcca ggttgcgatg cacaattttt gcgcgtcgtt
     2881 tcataaaacg taacgccagt tttcctaatc cacaaccgag gcggtagata accgggtagg
     2941 gcaattgcac gactaaccaa agtacgccaa tacccaacca ggttaaccaa taacgcggat
     3001 gaagcagtgc ggtggagaac ttgggtagat tcgtcatatc aatcctgttt ttcaacctat
     3061 tcgggcaatt gtatgtattg tcgcattttt tcgcccgcaa ccaaaatttg tggctgaaga
     3121 ctgggcgaaa ttgccgcgct tgtaaataac aaataatttt taatgcgcaa atgtagcgta
     3181 aaatgtgtgg atgttaatta tcgataattg ctatatcatg ccgcggattt ttactttccc
     3241 atctcgcagg aaccgtacac catgccagtg ttacacaacc gcatttccaa cgacgcgcta
     3301 aaagccaaaa tgttggctga gagcgaaccg cgaaccacca tttcgtttta caagtatttc
     3361 cacatcgccg atcctaaggc gacccgtgac gctttatatc agctgtttac cgcgctgaat
     3421 gtttttgggc gagtgtatct ggcgcatgag ggcattaacg cgcaaatcag cgtacctgcg
     3481 agcaatgttg aaacatttcg cgcgcagctc tatgccttcg acccggcttt agagggttta
     3541 cgcctgaata tcgcgttgga tgatgacggg aaatccttct gggtactgcg catgaaggta
     3601 cgtgatcgca ttgttgccga cggtattgac gatcctcact ttgatgccag caatgttggt
     3661 gagtatctgc aagcggcgga agtgaacgcc atgcttgacg atcccgatgc actatttatc
     3721 gacat
//
LOCUS       DADMHC010000264         3725 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.267, whole genome shotgun sequence.
ACCESSION   DADMHC010000264 DADMHC010000000
VERSION     DADMHC010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3725)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3725)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3725
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.267"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(321..1016)
                     /locus_tag="JNZ57_003832"
     CDS             complement(321..1016)
                     /locus_tag="JNZ57_003832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HAY8829867.1"
                     /translation="MDNRGEFLNNVAQALGRPLRLEPQAEDAPLNNYANERLTQLNQQ
                     QRCDAFIQFASDVMLTRCELTSEAKAAEAAIRLCKELGDQSVVISGDTRLEELGISER
                     LQQECNAVVWDPAKGAENISQAEQAKVGVVYAEYGLTESGGVVLFSAAERGRSLSLLP
                     ESSLFILRKSTILPRVAQLAEKLHQKAQAGERMPSCINIISGPSSTADIELIKVVGVH
                     GPVKAVYLIIEDC"
     gene            complement(1009..2436)
                     /locus_tag="JNZ57_003833"
     CDS             complement(1009..2436)
                     /locus_tag="JNZ57_003833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HAY8829868.1"
                     /translation="MSIKTSNTDFKTRIRQQIEDPIMRKAVANAQQRIGANRQKMVDE
                     LGHWEEWRDRAAQIRDHVLSNLDAYLYLLSEKVSQNGGYVWFAKNKEDATRYILQVAQ
                     RKNARKVVKSKSMVTEEIGVNHVLQDAGIQVIETDLGEYILQLDQDPPSHVVVPAIHK
                     DRHQIRRVLHERLGYEGPETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCL
                     VTNEGNARMCTTLPKTHIAVMGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTG
                     PREAGHIDGPEEFHLVIVDNGRSEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYG
                     SIYPGPIGAVISPLLGGYKDFKDLPYACSLCTACDSVCPVRIPLSKLILRHRRVMAEK
                     GITAKAEQRAIKMFAYANSHPGLWKVGMMAGSHAASWFINGGKTPLKFGAISDWMEAR
                     DLPEADGESFRSWFKKHQAQEKKNG"
     gene            complement(2447..3166)
                     /locus_tag="JNZ57_003834"
     CDS             complement(2447..3166)
                     /locus_tag="JNZ57_003834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HAY8829869.1"
                     /translation="MNVNFFVTCIGDALKSRMARDSVLLLEKLGCRVNFPEKQGCCGQ
                     PAINSGYIKEAIPGMKNLIAALEDNDDPIISPAGSCTYAVKSYPTYLADEPEWASRAE
                     KVAARMQDLTSFIVNKLGVVDVGASLQGRAVYHPSCSLARKLGVKDEPLTLLKNVRGL
                     ELLTFAEQDTCCGFGGTFSVKMAEISGEMVKEKVGHLMEVRPEYLIGADVSCLLNISG
                     RLQREGQKVKVMHIAEVLMSR"
BASE COUNT          956 a         1007 c          776 g          986 t
ORIGIN      
        1 tcagtaagtt ggagtcatta cctgttttgc cttgtcaaaa aaatggtaga tgaataccaa
       61 caaaactctg ggcagtaata aacaacattc tgatagagag tgcctgtata aagctgaagt
      121 gacaatgacc gggaagggaa cccgttttca ggaatggatg cctgtctttt tcactgtaaa
      181 tatcctggca ttactaatgc caggatattt acagaagagc agcataacca tgacggaacg
      241 gggttaagtc aggttgtcct taacgctatt ttcaacctcg tatgccttct tcaggtttat
      301 gttcagatct catatctctc tcagcaatcc tcaataatca gatacaccgc tttcaccggg
      361 ccatgaaccc cgacgacttt gataagctca atatccgccg ttgaactagg gccgctaatg
      421 atgttaatgc aggacggcat tcgttcaccg gcctgcgctt tctgatgcaa tttttctgcg
      481 agttgcgcta cacgcggcag gattgtgctt ttacgcagga taaaaagaga agattccggg
      541 agcaggctca atgaacgccc gcgctcggcg gcggaaaaaa gaaccacgcc tcccgattcg
      601 gttaaaccat attcagcata cacaacaccc actttagcct gctctgcctg cgagatattc
      661 tcggcacctt tcgccggatc ccaaacaacg gcattgcatt cctgctgcaa acgttcacta
      721 atccccaatt cctccagcct cgtgtcaccg ctaatcacga ccgactgatc tcccagctct
      781 ttacacagac gtattgcagc ttctgccgcc ttcgcctcgc tggtcagctc acagcgcgtc
      841 aacataacat cgctggcaaa ctgaataaac gcgtcacagc gctgctgttg gttaagttgg
      901 gtaagccgct cgttagcata gttgttaagc ggcgcatctt ctgcttgcgg ttcaagtcgc
      961 agcgggcgac ccagtgcctg agcaacgtta ttcaaaaatt cgcctcgatt atccattctt
     1021 tttctcctgc gcctgatgtt tcttaaacca actacggaaa ctctctccgt cagcttcagg
     1081 aagatcgcgt gcttccatcc agtcgctaat cgcgccaaat ttgagtggtg ttttgccgcc
     1141 attgataaac cagcttgccg catgagagcc ggccatcatc ccgactttcc acaatcctgg
     1201 atgactattg gcataagcga acatttttat cgcccgttgc tctgcttttg cggtgatccc
     1261 tttttctgcc atcacccgac gatgacgcaa aatcagtttt gacagcggaa tacgcaccgg
     1321 acacacgctg tcacaagcag tgcataaaga gcaggcgtag ggtaaatctt taaaatcttt
     1381 atagccgcca agtagcggag aaatcaccgc accaattggc cctggataaa tagagccata
     1441 tccatgaccg ccaatatggc gatatgccgg acaagtattc atacaagccc cgcagcgaat
     1501 acagcgcagc acatcccgaa attcagaggc cagcacctca gaacgcccgt tatcgacaat
     1561 aaccagatga aactcttcag gaccatcaat gtgccccgct tcgcgcggtc ctgtcagcca
     1621 ggtgttgtat cccgtcaaac gtgcaccaac ggcactgcgc gccagcatgg tgatcaatac
     1681 atctacctcg gcaaacgtgg gggcaatacg ctccattccc atcactgcaa tatgcgtttt
     1741 aggcagcgtg gtacacattc gcgcattacc ttcattggtc accaggcata ccgaacctgt
     1801 ctctgccacc gcgaaattac agccggtaat acctatttca gcactgagga aatcttcgcg
     1861 gattttttgc cggatgaata aggtcatcgc ttcaggcgtt tccggcccct catagcccag
     1921 acgttcgtgt agcactcgac ggatctgatg gcgatcttta tgaattgccg ggaccacaac
     1981 atgagatggc ggatcttgat ccagctggag aatatattca cccagatcgg tttcaatcac
     2041 ctgaatgcca gcatcctgca acacatgatt gacaccaatc tcttcggtca ccatcgattt
     2101 agatttcacc accttccggg catttttgcg ttgggcaacc tgtaaaatgt agcgggtagc
     2161 gtcttctttg ttttttgcaa accagacgta accgccgttt tgcgacactt tttctgagag
     2221 caggtacaga taagcgtcga gattactcag aacatgatca cgtatctggg cggcccgatc
     2281 gcgccactcc tcccagtgcc ccaattcatc gaccattttt tgccgatttg ccccaatacg
     2341 ctgctgcgcg tttgccaccg ctttgcgcat gatcggatct tcaatttgct gacggatgcg
     2401 tgtcttaaaa tctgtattac tggttttgat cgacatcttt atatcctcag cggctcatca
     2461 acacttcagc aatatgcatc actttgactt tctgcccttc ccgttgtaat cgcccactga
     2521 tgttcagcag gcaactcacg tcagcaccaa ttaaatactc agggcggact tccatcaggt
     2581 gcccaacctt ttctttcacc atctcgccgg atatttcggc cattttgacc gagaacgtgc
     2641 cgccaaatcc gcagcaggta tcctgttcag caaaggtcaa cagctccagt ccacgcacat
     2701 ttttcagcag cgtaagtggc tcgtccttca ctcccagctt acgggccagg ctacaagatg
     2761 ggtgatacac agctctccct tgcaaactgg cacctacatc gactacccct aatttattaa
     2821 caataaaaga ggtgagatcc tgcatacgcg cggcaacctt ttcggcacgt gatgcccatt
     2881 caggttcatc cgccagatac gtcgggtaac tttttacggc ataggtgcaa gagccagccg
     2941 gtgaaataat gggatcgtcg ttatcctcca gtgcggcgat cagatttttc atccctggaa
     3001 tcgcttcttt gatataaccg ctattgatcg caggctgacc gcagcatccc tgtttctccg
     3061 ggaaatttac gcgacagccg agtttttcca gtagcagcac ggagtctcgt gccattcttg
     3121 atttcagggc gtcaccaata caggtgacaa agaaattgac attcacaact aatactccat
     3181 tacttcatgc ccatttatgc ccgatgtttc ccccccaccg ggggatcaat catcaataaa
     3241 tatggcgttc ttttttaatt ggctagcaac atactacccc tcatttgtat gacaaatgat
     3301 aatctttcac ccaaacgtca aatgcaataa ctaattttat ttctttcggc atcgctcaca
     3361 ttttatggag aaatcgacga tcatttttgg cataagaaat ccatttaaaa atggccacat
     3421 cccttatacc tattcagagc tacttattca ggggttattg agatatacac tgatggtgta
     3481 caaacaaaat caccgacaat aatcacgtat caagtaatag tcgggatttt atttaattga
     3541 agcaatttag tttgtatctt ttatttaatt actaagccag accacttcaa aaaaacatat
     3601 aaaaaagttg gaaatataaa tagctgaaag gctcacaaca cccggaatgc ggattatctt
     3661 tgctccgatt cctggcggtt ttattcaggg tgcaagctgt ctgacccttt cccgggtaat
     3721 gactc
//
LOCUS       DADMHC010000265         3719 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.268, whole genome shotgun sequence.
ACCESSION   DADMHC010000265 DADMHC010000000
VERSION     DADMHC010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3719)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3719)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3719
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.268"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(1..262)
                     /locus_tag="JNZ57_003835"
                     /pseudo
     CDS             complement(1..262)
                     /locus_tag="JNZ57_003835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611134.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(377..1015)
                     /locus_tag="JNZ57_003836"
     CDS             complement(377..1015)
                     /locus_tag="JNZ57_003836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829870.1"
                     /translation="MINGVSLQGTAGYEAHTEEGNVNVKKLLESLNSKSLGDMDKDSE
                     LAATLQKMINPSGGDGNCSGCALHACMAMLGYGVREAPVPNEISEYMTGFFHRHLEQI
                     DSEGIVSHPNETYSKFRERIAENILQNTSKGSVVMISIEQATHWIAGFNDGEKIMFLD
                     VQTGKGFNLYDPVEKSPDAFVDENSSVQVIHVSDQEFDHYANSSSWKSKRLC"
     gene            complement(1174..1671)
                     /locus_tag="JNZ57_003837"
                     /pseudo
     CDS             complement(1174..1671)
                     /locus_tag="JNZ57_003837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558264.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(1671..3272)
                     /locus_tag="JNZ57_003838"
     CDS             complement(1671..3272)
                     /locus_tag="JNZ57_003838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66-like element ISSfl3 family transposase"
                     /protein_id="HAY8829871.1"
                     /translation="MNNELPDDIELLKAMLRKQQSRLRQYACQVAGYEQEIERLKAQL
                     DRLRRMLFGQSSEKKRHKLENQIRQAEKRLSELENRLNTARNLLEDASSVTDSPDTSP
                     PSENPIASKPESPGRKSSRKPLPAELPRETHRLLPAETSCPACGGVLKEMGETISEQL
                     DIINTAFKVIETIRPKLACSRCDVIVQAPLPPKPIERGYASAGLLARILVSKYMEHIP
                     LYRQSEIYARQGVELSRNTMVRWVSEMADKLRPLYIALNDYVLEAGKVHADDTPVKVL
                     APGNGKTKTGRLWVYVRDDRNAGSSLPAAVWFAYSADRKGEHPQLHLAKYQGVLQADA
                     YAGYNVLYETGRVKEAGCLAHARRKIHDEDVRRPTEMTQEALRRIAELYDIEAEIRGS
                     PAEERLAVRKARSVQLMQSLYDWIQLQRKTLSKHAEMAKAFDYILNHWNALNEFCRDG
                     WVEIDNNIGENALRSVAVGRKNYLFFGSDKGGESAAIIYSLLVTCKQNEVEPEDWLRE
                     VIEKLNDWPSNQVHELLPWNFSSVK"
     gene            complement(3292..3474)
                     /gene="tnpB"
                     /locus_tag="JNZ57_003839"
     CDS             complement(3292..3474)
                     /gene="tnpB"
                     /locus_tag="JNZ57_003839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000950098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HAY8829872.1"
                     /translation="MLWADRDGLCLFAKRLERGRFVWPVTREGKVHLTPAQLSMLLEG
                     IAWQHPKRTERPGIRI"
BASE COUNT          871 a          997 c          804 g         1047 t
ORIGIN      
        1 gcaagcgctg taactctttt atttgtttta tagcggcagc cagttctgag gcaggaacga
       61 catcctctcc ggcagcaaca gcagtgagac ttccttccag atattatttt ttccacttaa
      121 gcaacaggct gggctgaata ccatgcaaac gcgccacatg ggacaccgtc atgctaggct
      181 ccattgtctg ctgaataatg gcaatttttt cctgaggagt tttacgttta cgaagctcca
      241 gccccagcaa agttccagtc atctcaaaat tagaactagt gttagacata tatccaagcc
      301 tatctcttat tttaagatac atccactgtc tggcgtttca aggggccggc tcaaatctat
      361 gtacaggctc tcagcatcag caaagcctct tactcttcca actactactg ttagcatagt
      421 gatcaaattc ctgatcagat acatgaatta cctgaaccga actattttca tctacaaatg
      481 catctggcga tttttctaca ggatcataaa gattaaatcc ctttcctgtt tgaacatcca
      541 aaaacataat tttttcacca tcgttaaatc cagctatcca atgagtggcc tgttcaatag
      601 aaatcattac tacacttcct tttgaagtgt tttgtaaaat attttctgca atacgctcac
      661 gaaatttact ataagtttca ttaggatgtg acactatgcc ttcactatca atttgctcta
      721 aatgcctatg aaaaaatccg gtcatatact ctgatatttc attaggtacg ggagcctctc
      781 ttactccata ccctaacata gccatacaag catgaagcgc acaccctgaa cagttaccat
      841 ccccaccaga cggatttatc attttctgta aagtcgctgc caattcagaa tctttatcca
      901 tatcaccaag acttttagag tttaaagatt ccagcaattt tttaacattt acatttccct
      961 cctctgtatg tgcctcatat ccagcagttc cctgtaacga caccccatta atcatattgt
     1021 atcctgacag tatatatact cactatattt tcttcataac aaatatccct ctgatatgac
     1081 aacaaaaaac ggagccggat tcctgttttt gtgaactgca gctattcgag tctaaaaagt
     1141 gatccactta ccaccaacgg cctaatatat acagaacgga gtaaacaggg ctaacagttc
     1201 ccgataggtc tcatcattcc gtggcccgaa agtgtaagcc aacacaccgc cagttttagt
     1261 gttgtacgca taccagagcc agtgttgttg cagccttgct gccgacgaag cgccactgct
     1321 catcaagttc acagataagg gcaacatcag cgtgagcgac tggcgcagat gttatccgcc
     1381 ggggcgggag ctttttaatg tccgtatgac ggtattgatg ccgattttca gtgtcctggc
     1441 agtatcacgg ccccctgcgc cgttatgtgc catttcaacg atctgctcct taacgccggg
     1501 ttttctggct tcataagagt aagtgagctg gaaaacacgt ttacatgagc gacaacggaa
     1561 acgctcatgc cgggaacaac tacggccatg tcgataaact tcatcggaat gacagcgcgg
     1621 acaatgaaca gtaacggtgt aagcgccccg agaagtacgt agcgtaagga ttattttaca
     1681 gacgagaagt tccagggcag cagttcatgc acttggttcg acggccagtc attgagcttc
     1741 tcgatcactt cgcgcaacca gtcctccggc tccacttcgt tctgtttgca ggtgaccagc
     1801 agactgtaga tgatcgccgc actttctcct cccttgtctg agccgaaaaa gagataattt
     1861 tttcttccaa ccgccaccga tcgtaacgcg ttttcaccga tgttgttgtc tatttccacc
     1921 cagccgtcac gacagaactc gttcagcgca ttccagtgat tcaggatata gtcgaacgcc
     1981 ttcgccatct ccgcatgttt cgacagcgtt ttcctctgca actgtatcca gtcgtacaat
     2041 gactgcatca actggacgct tctggctttt ctgactgcaa gccgttcctc tgccggactg
     2101 ccacgtatct ccgcttctat gtcgtataac tctgctatcc gtctgagcgc ttcctgagtc
     2161 atttctgtcg gacggcgcac atcctcgtca tggatttttc ggcgggcgtg ggccaggcac
     2221 ccggcttcct tcacccggcc cgtttcgtac agtacgttat aacctgcata ggcatcagcc
     2281 tgcagtacgc cctgatactt tgccaggtgg agctgcggat gttctccttt gcgatctgcc
     2341 gaatacgcga accagacggc tgccggcagg gatgaacccg cattacgatc atccctgacg
     2401 tatacccaca gacgacccgt tttcgtcttt ccgttccccg gggccagtac tttcaccgga
     2461 gtgtcatctg cgtgcacctt tcctgcctcc agaacatagt cattcagcgc tatatacaga
     2521 ggacggagtt tgtctgccat ttctgatacc cagcgcacca tggtattacg gctcagctcc
     2581 acgccctgtc gcgcgtatat ttctgactgg cgatataaag ggatatgttc catatatttg
     2641 ctgaccagga tccgtgcaag taaccctgca ctggcataac cgcgttcgat cggtttaggg
     2701 ggaagtggtg cctgaacgat gacatcacac cggctacagg ccagtttggg acgtatggtt
     2761 tcgataactt taaaggcggt attaatgata tccagttgct ctgagattgt ttcccccatt
     2821 tctttcagaa cacctccaca ggccgggcaa ctggtttcag caggcagaag gcgatgtgtc
     2881 tcccggggaa gttctgccgg cagcggtttt cgtgaagatt ttcgtcccgg ggattcaggc
     2941 ttactggcga tcgggttttc tgacggggga ctggtgtcag gtgaatctgt gactgacgat
     3001 gcatcttcca gaagatttct ggctgtgttc agtcggtttt ccagttccga cagtcgtttt
     3061 tctgcctgtc ggatctgatt ttcaagctta tgacgctttt tctctgaact ctggccgaac
     3121 agcatacgac gcaacctgtc gagttgcgct ttcagccgtt caatttcctg ctcatagccc
     3181 gcgacctgac aggcatactg tcgaagccga ctctgttgct tacgcaacat ggctttaagc
     3241 agctcaatat catcggggag ttcattgttc attcccttgt tttatcacgg gttatatccg
     3301 gatgccaggc cgttctgtcc gtttgggatg ttgccacgcg atcccctcca gtagcatgga
     3361 taactgagct ggcgtcaggt gcactttccc ttcccgggtc accggccaga cgaagcggcc
     3421 ccgttccagg cgtttggcga acaggcataa cccgtcacga tcggcccaca gtatttatat
     3481 gaacgcatcc cgtttgcaag gcatccattg ttttgacatg acgggttggt tgcagcttta
     3541 tatccggctt tattgcagcc gtaacgctgc gagcccctat gtaattcgcc gactcacccc
     3601 ttattttcac ggcggacttc aagcccaaaa tactgttcag gtttagtgag tcacggtctt
     3661 acctgtcttt gtcatcactc tggccgccat agcaaccttt cagcattcac ccttttgtt
//
LOCUS       DADMHC010000266         3680 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.269, whole genome shotgun sequence.
ACCESSION   DADMHC010000266 DADMHC010000000
VERSION     DADMHC010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3680)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3680)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3680
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.269"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(120..2189)
                     /gene="glyS"
                     /locus_tag="JNZ57_003840"
     CDS             complement(120..2189)
                     /gene="glyS"
                     /locus_tag="JNZ57_003840"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001291772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HAY8829873.1"
                     /translation="MSEKTFLVEIGTEELPPKALRSLAESFAANFTVELDNAGLAHGT
                     VQWFAAPRRLTLKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITV
                     DQAERLTTDKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRP
                     VHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIAD
                     YEERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEA
                     LVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFF
                     NTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLL
                     SKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC
                     ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAV
                     RLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKA
                     VSHFRTLDAAAALAAANKRVSNILAKSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDK
                     LEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV
                     ADISLLQ"
     gene            complement(2199..3110)
                     /gene="glyQ"
                     /locus_tag="JNZ57_003841"
     CDS             complement(2199..3110)
                     /gene="glyQ"
                     /locus_tag="JNZ57_003841"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HAY8829874.1"
                     /translation="MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMT
                     CLRALGPEPMAAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSL
                     KELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVT
                     GEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDF
                     LFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRI
                     RTLTKAVAEAYYASREALGFPMCNKDK"
     gene            complement(3205..3504)
                     /locus_tag="JNZ57_003842"
     CDS             complement(3205..3504)
                     /locus_tag="JNZ57_003842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829875.1"
                     /translation="MMMNAFFPAMALMVLVGCSTPSPVQKAQRVKVDPLRSLNMEALC
                     KDQAAKRYNTGEQKIDVTAFEQFQGSYEMRGYTFRKEQFVCSFDADGHFLHLSMR"
BASE COUNT          849 a          999 c          948 g          884 t
ORIGIN      
        1 ctcataaaat taatatatga gataatcttt attcagcaga agattattaa aggttgctgt
       61 attatttagc gataataaaa aaagcctgcc agatggcagg ctttttaata acggcgttat
      121 tactgcaaca gcgaaatatc cgcaacgcgc aggaacagtt cgcgcagttt ctccagcatg
      181 gtcagacggt tgagacgcaa ttctttgtca tcaaccatga ccatcacttt atcgaagaaa
      241 gcatcaaccg gctcacgcag ctctgccagt tcgaccagcg catcctggta acgaccttcc
      301 gcaaagtacg gctccagctt gtcacgtagc accacaacct gcatcgccag tttaatttct
      361 tccggctctt tcagggtaga ggcattcacg cggtcgctca gcacttcgtc agatttcgcc
      421 agaatgttag atacacgttt gttcgccgcc gccagtgcag cagctgcatc cagggtacgg
      481 aaatgcgata ccgctttcat acgggcatcg aaatcagccg gacgagtcgg acgacgcgcc
      541 agtaccgcct ggatggtgtc aacggtgtaa ccttcgtcct gataccaggc gcggaagcga
      601 ccgagcataa agtcgataac atcatcaacc acgttggcgt tagtcagctt atcgccatac
      661 agacgcactg cttcttcggt cagcgtttgc agatcaaggt tgaggttctt ctcaacgata
      721 attcgcagca cgccaagtgc ggcacgacgc agcgcaaacg ggtctttgtc gcctttcgga
      781 tgctgaccga taccgaagat acccgccaga gtatccatct tatcagcaat cgccagcgca
      841 caagctaccg ggttggacgg caggtcatca ccggcaaagc gcggctgata ctgctcattc
      901 agcgcgacgg ctacgtcttc cgcttcgcca tcgtgacgcg cgtagtgcat ccccataacg
      961 ccttgggtgt cggtgaactc gaagaccatg ttggtcatca ggtcacactt agacagcagg
     1021 cccgcacggg ttgcgtggtt aacgtcagcg ccaatctgtt cagcaatcca gccagccagc
     1081 gcctggatgc ggtcagtttt gtcacgcagc gtacccagct gttgctggaa cagcacggtt
     1141 tgcaggcgcg gcaggttatc ttccagacgt tttttacggt cggtattgaa gaagaactcg
     1201 gcatccgcca gacgtggacg aacgactttc tcgttaccag agataatttg ctgcggatct
     1261 ttcgattcga tgttggcaac gaagatgaag ttcggcagca gtttgccatc gttcgcatac
     1321 accgggaagt atttctggtc acctttcatg gtgtaaacca gggcttcagc cggcaccgcg
     1381 aggaatttct cttcgaattt tgcggtcaga acgaccggcc actccaccag cgaagccact
     1441 tcttccagca ggctttcgct taagtcagcg ttaccgccaa tcttacgcgc tgcttcttcg
     1501 gcatcggctt taatcttcgc tttacgttct tcgtaatcgg cgatgacttt cccgcgctca
     1561 cgcagaattt ccggatactg atcggcgttg tcgatggtga attccggttc gcccataaag
     1621 cggtggccgc gaatcacgcg atcggactga atgcccagaa tagttgccgg aatgactttg
     1681 tcgcccagca gcagggtcac ggtgtgcacc ggacgcacga agtgcacgtc gcttgcgccc
     1741 caacgcatca gtttcgggat cggcagtttc gccagagaag tcgcaaccat attcggcagc
     1801 agtgcttcgg tgctttcgcc cttcacatgg gcgcgataca gcagccattc gcctttatcg
     1861 gtagtcagac gctcagcctg gtcaacggta ataccgcaac cacgcgccca accttctgcc
     1921 gctttgctcg gtttgccttc agcgtcgaac gcctgggcaa tcgccgggcc gcgtttttcg
     1981 atttcacgat ccggttgcgc ttccgccagg ttagctactt tcagcgtcag acgacgcgga
     2041 gcagcaaacc attgaacggt gccgtgtgcg aggccagcgt tatccagctc cacagtaaaa
     2101 ttcgcagcaa aggactcagc caggctgcgc agtgcttttg gtggcagctc ttcagtgccg
     2161 atttccacca gaaaagtttt ctcagacata gccgcctctt acttatcttt gttgcacatc
     2221 gggaagccga gggcttcacg ggaagcgtag tatgcttctg ccactgcttt ggtcagggtg
     2281 cgaatgcgca gaatgtagcg ctgacgctcg gtgacggaga tggctttacg cgcatccagc
     2341 aggttgaagc tgtgggcggc tttcagaata cgctcgtagg ctggcagcgg cagcggattt
     2401 tccagcgcca gcagctgctg tgcttctttc tcgtactgct caaagcaggt gaacaggaag
     2461 tccacatccg cgtattcgaa gttgtaagtg gactgctcca cttcgttctg atggaacacg
     2521 tcgccgtagg tggttttacc cagcgggccg tcgctccaga ccaggtcgta aacgctgtct
     2581 acgccctgaa tgtacatggc cagacgttcc agaccgtagg tgatctcgcc ggtaaccggt
     2641 ttacactcca gaccaccaac ctgctggaag taagtgaact gcgtcacttc catgccgttt
     2701 agccacactt cccagcccag tccccaggca cccagagtcg ggttttccca gttatcttcc
     2761 acgaaacgga tgtcgtgaat agtcgggtcc atgcccagct ctttcagaga accgaggtac
     2821 agctcctgaa tattgtccgg cgatggctta atgaccacct ggaactgata gtagtgctgt
     2881 aaacggttgg ggttttcgcc gtagcgacca tcggtcgggc gacgagaagg ctgaacataa
     2941 gcagccgcca tcggttctgg ccccagcgcg cgcagacagg tcattgggtg agaggttccc
     3001 gcgccgactt ccatgtccaa tggttgaaca atggtgcagc cctggcgagc ccagtaatcc
     3061 tgtaaggtca ggatcaagcc ctggaaggtc ctggtatcaa acttttgcat attatttcgt
     3121 gctggatacg tgtggattta aaggaaggga tcagtatacc cgctggatgg aagatataca
     3181 gtacgaaacg ggaaaaagca gggcttaacg catggaaaga tgcaaaaaat ggccatctgc
     3241 gtcaaaagaa cagacaaact gctctttacg gaaggtataa ccgcgcattt catagcttcc
     3301 ctggaactgt tcgaaggcgg tgacgtcgat tttttgctcg ccggtgttat aacgttttgc
     3361 cgcctgatcc ttgcataacg cttccatatt caacgaacgc agaggatcaa cctttacccg
     3421 ttgtgctttc tgcacgggtg acggtgtaga acaacccact agcaccataa gcgccattgc
     3481 cggaaagaaa gcgttcatca tcattaaatt accgtctggt ttgcaggtga gtcttattat
     3541 ttatatcggt atagtggctg atatcttacg aatttcctta agcctctata agctgtagtg
     3601 ataaaactca gattattcca gtgcgccaac caaatgattt atcggtcaga ctttttttaa
     3661 ccagatacag agacacagat
//
LOCUS       DADMHC010000267         3676 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.270, whole genome shotgun sequence.
ACCESSION   DADMHC010000267 DADMHC010000000
VERSION     DADMHC010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3676)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3676)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3676
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.270"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..267)
                     /locus_tag="JNZ57_003843"
     CDS             complement(<1..267)
                     /locus_tag="JNZ57_003843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415967.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HAY8829876.1"
                     /translation="MPGMGKMKHVSLTLQVENDLKHQLSIGALKPGARLITKNLAEQL
                     GMSITPVREALLRLVSVNALSVAPAQAFTVPEVGKRQLDEINRIR"
     gene            complement(465..1502)
                     /gene="curA"
                     /locus_tag="JNZ57_003844"
     CDS             complement(465..1502)
                     /gene="curA"
                     /locus_tag="JNZ57_003844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415966.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent curcumin/dihydrocurcumin
                     reductase"
                     /protein_id="HAY8829877.1"
                     /translation="MGQQKQRNRRWVLASRPHGAPVPENFRLEEDDVATPGEGQVLLR
                     TVYLSLDPYMRGRMSDEPSYSPPVDIGGVMVGGTVSHVVESNHPDYQPGDWVLGYSGW
                     QDYDISSGDDLVKLGDHPQNPSWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAATG
                     PVGATVGQIGKLKGCRVVGGAGGAEKCRHAIEVLGFDVCLDHHAGDFAEQLVKACPKG
                     IDIYYENVGGKVFDAVLPLLNTSARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKR
                     IRLQGFIIAQDYGHRIHEFQKEMGQWVKEDKIHYHEDITDGLENAPQTFIGLLKGKNF
                     GKVVIRVAGDD"
     gene            1683..2201
                     /gene="mddA"
                     /locus_tag="JNZ57_003845"
     CDS             1683..2201
                     /gene="mddA"
                     /locus_tag="JNZ57_003845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-methionine sulfoximine/L-methionine sulfone
                     acetyltransferase"
                     /protein_id="HAY8829878.1"
                     /translation="MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFE
                     ARTIAGYPVLVSEEDGVVTGYASFGDWRSFDGFRHTVEHSVYVHPDHQGKGLGRKLLS
                     RLIDEARDSGKHVMVAGIESQNQASLHLHHSLGFVVTAQMPQVGTKFGRWLDLTFMQL
                     QLDERTEPDAIG"
     gene            2198..2647
                     /locus_tag="JNZ57_003846"
     CDS             2198..2647
                     /locus_tag="JNZ57_003846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HAY8829879.1"
                     /translation="MNQSLTLAFLIAAGIGLVVQNTLMVRITQTSSTILIAMLLNSLV
                     GIVLFVSILWFKQGMAGFGELVSSVRWWTLIPGLLGSFFVFASISGYQNVGAATTIAV
                     LVASQLIGGLMLDIFRSHGVPLRALFSPICGAILLVVGAWLVARRSF"
     gene            complement(2648..2881)
                     /locus_tag="JNZ57_003847"
     CDS             complement(2648..2881)
                     /locus_tag="JNZ57_003847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcY family protein"
                     /protein_id="HAY8829880.1"
                     /translation="MSHLDEVIARVDAAIEESVIAHMNELLIALSDDAELSREDRYTQ
                     QQRLRTAIAHHGRKHKEDMEARHEQLTKGGTIL"
     gene            complement(2967..3101)
                     /locus_tag="JNZ57_003848"
     CDS             complement(2967..3101)
                     /locus_tag="JNZ57_003848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GhoT/OrtT family toxin"
                     /protein_id="HAY8829881.1"
                     /translation="MAAIAFLITWFLSHDKKRIRFLSAFLVGATWPMSFPVALLFSLF
                     "
     gene            3336..3431
                     /gene="yncL"
                     /locus_tag="JNZ57_003849"
     CDS             3336..3431
                     /gene="yncL"
                     /locus_tag="JNZ57_003849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response membrane protein YncL"
                     /protein_id="HAY8829882.1"
                     /translation="MNVSSRTVVLINVFAAVGLFTLISMRFGWFI"
BASE COUNT          901 a          931 c          841 g         1003 t
ORIGIN      
        1 gcggatccga ttgatttcgt ctaattgacg tttccccact tccggaactg taaatgcttg
       61 tgcaggtgcg acagaaagcg cattcaccga aaccagacgt aataatgctt cacgcacagg
      121 tgtaatactc atacctaatt gctccgccag atttttagta atcaggcgtg cgccaggttt
      181 taatgcgcca atactaagct gatgtttcag gtcgttctca acctgcagag tcaaactgac
      241 atgtttcatt tttcccattc caggcatttt aattccttcg cgtgttttct gtccaaccct
      301 gcctgcacgg cagaaggagt tcacctggtg tattaaagtg aataatcata aaccacccac
      361 ctttgttgtt attagcagca gaacaatgac gtggttagtt aattaaagct gaaaataagc
      421 tttttgcctg gatttttatg gcggcttacg ccgccgttga aactttaatc atcacccgcg
      481 acgcggatca ccactttgcc gaagttttta cccttcagca ggccgataaa cgtctgtggc
      541 gcattctcta aaccatcagt aatatcttcg tggtagtgga ttttatcctc tttcacccat
      601 tgccccatct ccttctgaaa ctcatggatg cggtgaccat aatcctgagc gataataaac
      661 ccttgcaagc gaatacgttt tttcagcacc gttgccatca acaggggtaa acgatccgga
      721 ccgggtggta gctctgtagc gttatagctg ctcactaagc cacaaacggg aatgcgcgca
      781 gatgtattaa gtaatggtag cactgcatca aataccttac cgcccacgtt ttcataatag
      841 atatcaatac cttttgggca cgctttcacc agttgttcgg caaaatcacc cgcgtggtga
      901 tcaagacaaa catcgaagcc cagcacctcg atagcatggc ggcatttttc cgcaccaccg
      961 gcacccccca ccaccctgca acctttaagt ttgccgattt gccccaccgt tgctcccaca
     1021 ggacctgtcg ccgcagctac caccaacgtt tcgccctctt taggctgacc gatatccagc
     1081 agccccatat aagcggtaaa gcctggcatc cccagcacac ccagcgacca cgatggattt
     1141 tgcggatgat cgccaagttt caccagatca tcaccactgg atatgtcata gtcctgccat
     1201 ccactgtagc ccagcaccca gtcgccaggc tgataatcag gatgattcga ctccacaaca
     1261 tggctcaccg tgccgccgac catcacgccg ccaatatcaa caggcggtga ataagatggc
     1321 tcatcgctca tacgtccacg catatacggg tccagggaca aataaactgt gcgcagtaac
     1381 acctgtcctt cacccggtgt ggcgacatca tcttcttcaa gacggaaatt ctccggaacc
     1441 ggtgcgccat gtggacgcga ggccagaacc caacgtcgat tacgctgctt ttgttgcccc
     1501 ataatgctct cctgtgcttt tggcatgaat ccatcaatag tagcaggctc acgggattgg
     1561 ttttgtttgc agccgtcaca tcccctctgc aacacgcaat aatttcatcg aggaatccgt
     1621 tgcttcgggc tgttttcgat agtattgata acatcatcat cattatttta tcgaggccag
     1681 acatgtccat ccgttttgcc cgcaaagccg attgtgctgc cattgcggaa atttataacc
     1741 acgccgtgtt gtatacggcg gctatctgga atgaccaaac ggttgatgca gataaccgca
     1801 ttgcctggtt tgaagcgcgg accatagcag gttatccggt gctggtaagt gaagaagatg
     1861 gcgtagtgac gggatatgcc tcgtttggcg actggcgtag tttcgatggt tttcgccata
     1921 ccgtggaaca ttcggtttat gtccatcccg atcatcaggg caaaggtctg gggcgtaaat
     1981 tgttaagccg attgattgat gaagcgcggg atagcgggaa gcatgtcatg gtcgccggga
     2041 tcgaatcgca aaatcaggcc tcgctgcatc tgcaccattc gctgggattt gtcgtcaccg
     2101 cacaaatgcc gcaggtgggc actaaatttg ggcgctggct ggatctgaca tttatgcagt
     2161 tgcaactcga cgaacgcact gaaccggacg cgattggatg aatcagtcgc tcacccttgc
     2221 ttttttgatt gccgccggaa ttggtctggt agtccagaac acgctgatgg tgcgcatcac
     2281 ccagacctcc tctaccattc tcatcgccat gttgctgaac tcactggtgg ggattgtgct
     2341 ctttgtttct attttatggt ttaaacaagg catggcgggg tttggcgaac tggtgtccag
     2401 cgtgcgctgg tggacactta tacccggctt gctgggatcg ttttttgtct tcgccagtat
     2461 cagcggatat cagaatgtgg gagcggcgac aactattgca gtactggtcg ccagccagct
     2521 aattggcggt ctgatgctgg atatcttccg cagtcatggc gtaccactac gggcgttgtt
     2581 cagcccaatt tgtggcgcaa ttttacttgt ggttggcgcc tggttggtag ccagacgctc
     2641 attttaatca gaggatggtg ccgcctttgg ttaactgttc gtggcgcgct tccatatctt
     2701 ctttatgctt gcgaccgtga tgagcaatag cggtgcgcaa acgctgctgc tgggtgtagc
     2761 gatcttcccg acttaactcc gcgtcatcgc tcagggcgat taataattcg ttcatatggg
     2821 caatgacgct ctcttcaatc gcggcatcca cgcgcgcgat gacttcatcc agatgcgaca
     2881 tactttctcc ttaaccactt gtgaaattta tcgattcatc caaatgatat aagtctgcgt
     2941 ggtgccgtca agccagtgag taagatttaa aacagtgaaa acaacagcgc caccgggaaa
     3001 ctcatcggcc atgttgcccc caccagaaag gcgcttaaga aacggatgcg tttcttatcg
     3061 tgagaaagaa accaggtgat aagaaatgcg attgctgcca taaccgcata aaaaaacaag
     3121 catatgttga tagagagaca tgtacgggcg tccagccaga tgaataaaac gcgcgcaaat
     3181 atgcgtcatt ttttgacgtg catcaagttt tttcaccagt ttgagaaaaa atcatcaaac
     3241 agcaacttgc ccttatccat cttcagaatg agtattattg cggattttct taatccgtac
     3301 tatacacata ggggcaatga taaaaggtgg caaaaatgaa tgtttccagt agaactgtag
     3361 tactgataaa tgtctttgct gctgttggtt tgtttactct tatctctatg agatttggct
     3421 ggtttatttg atgtagtgat tttgcacgca gcacgtactg tcagagaaat caactctctg
     3481 acagtacgca agatcttctc atactctcca ggtttacaac attatcctta atatttactt
     3541 ctttttgctg gcatctacat tgaaatgagt agaaaacatc cccctactgt cgtctataca
     3601 aacagcttac tgattcaaac ggaatcttgt tttcacattt ttctatcatg aatactttat
     3661 acgcgcggga gtctat
//
LOCUS       DADMHC010000268         3653 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.271, whole genome shotgun sequence.
ACCESSION   DADMHC010000268 DADMHC010000000
VERSION     DADMHC010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3653)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3653)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3653
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.271"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(4..79)
                     /locus_tag="JNZ57_003850"
     tRNA            complement(4..79)
                     /locus_tag="JNZ57_003850"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(44..46),aa:Val,seq:tac)
     gene            complement(126..201)
                     /locus_tag="JNZ57_003851"
     tRNA            complement(126..201)
                     /locus_tag="JNZ57_003851"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(166..168),aa:Val,seq:tac)
     gene            complement(246..321)
                     /locus_tag="JNZ57_003852"
     tRNA            complement(246..321)
                     /locus_tag="JNZ57_003852"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(286..288),aa:Val,seq:tac)
     gene            581..1996
                     /gene="gltX"
                     /locus_tag="JNZ57_003853"
     CDS             581..1996
                     /gene="gltX"
                     /locus_tag="JNZ57_003853"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HAY8829883.1"
                     /translation="MKIKTRFAPSPTGYLHVGGARTALYSWLFARNHGGEFVLRIEDT
                     DLERSTPEAIEAIMDGMNWLSLEWDEGPYYQTKRFDRYNAVIDQMLEEGTAYKCYCSK
                     ERLEALREEQMAKGEKPRYDGRCRHSHEHHADDEPCVVRFANPQEGSVVFDDQIRGPI
                     EFSNQELDDLIIRRTDGSPTYNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALK
                     APVPVYAHVSMINGDDGKKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEI
                     FTREEMIKYFTLNAVSKSASAFNTDKLLWLNHHYINALPPEYVATHLQWHIEQENIDT
                     RNGPKLADLVKLLGERCKTLKEMAQSCRYFYEDFAEFDADAAKKHLRPVARQPLEVVR
                     DKLAAITDWTAENVHHAIQATADELEVGMGKVGMPLRVAVTGAGQSPALDVTVHAIGR
                     TRSIERINKALAFIAERENQQ"
     gene            complement(2047..2418)
                     /locus_tag="JNZ57_003854"
     CDS             complement(2047..2418)
                     /locus_tag="JNZ57_003854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding transcriptional regulator"
                     /protein_id="HAY8829884.1"
                     /translation="MTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILV
                     DTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVA
                     QFLSREGIRNFLARLDIDESA"
     gene            complement(2441..2785)
                     /locus_tag="JNZ57_003855"
     CDS             complement(2441..2785)
                     /locus_tag="JNZ57_003855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708260.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding transcriptional regulator"
                     /protein_id="HAY8829885.1"
                     /translation="MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHV
                     NEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGII
                     GLLQGLGIRDSK"
     gene            3021..3096
                     /locus_tag="JNZ57_003856"
     tRNA            3021..3096
                     /locus_tag="JNZ57_003856"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3054..3056,aa:Ala,seq:ggc)
     gene            3136..3211
                     /locus_tag="JNZ57_003857"
     tRNA            3136..3211
                     /locus_tag="JNZ57_003857"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3169..3171,aa:Ala,seq:ggc)
     gene            3420..>3653
                     /locus_tag="JNZ57_003858"
     CDS             3420..>3653
                     /locus_tag="JNZ57_003858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829886.1"
                     /translation="MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFL
                     AWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWN"
BASE COUNT          874 a          902 c          916 g          961 t
ORIGIN      
        1 aagtggtggg tgatgacggg atcgaaccgc cgaccccctc cttgtaaggg aggtgctctc
       61 ccagctgagc taatcaccca cttcggtact tcacattgtt acaagaaatt tagctggtga
      121 gaaagtggtg ggtgatgacg ggatcgaacc gccgaccccc tccttgtaag ggaggtgctc
      181 tcccagctga gctaatcacc cacttctcaa tttcttgcta cacggcggag actacataaa
      241 gtagttggtg ggtgatgacg ggatcgaacc gccgaccccc tccttgtaag ggaggtgctc
      301 tcccagctga gctaatcacc ccccgctgtg tggagtcgca ttatagggag agttcaaaat
      361 gagtcaacgc attttctaaa gaaattgttc gttcgtcgta aatttaagca agatgatcgc
      421 aaaacagacc gtgttgcgca atttgtcaac gaaaacaata atgcgtaagg tagaaatccg
      481 aactacattg aggaatcagg cgggagtgat agaatatcgc ccactcaatt tttccaggat
      541 ttgccggttg tcggcatctt tctaaacgta aggccatttc atgaaaatca aaactcgctt
      601 cgcgccaagc ccaacaggct atctgcacgt tggcggcgcg cgtactgctc tttactcctg
      661 gctttttgca cgtaaccacg gcggtgagtt cgtgctgcgt attgaagaca ccgatcttga
      721 gcgttccacg ccggaagcta tcgaagccat tatggatggc atgaactggc tgagcctgga
      781 gtgggatgaa ggtccgtact accagaccaa acgttttgat cgctacaacg cggtgatcga
      841 tcagatgctg gaagagggca ctgcttataa atgctattgc tctaaagagc gcctggaagc
      901 gctgcgcgaa gagcaaatgg cgaaaggtga gaagccgcgt tatgacggtc gctgccgcca
      961 cagccatgag catcacgctg atgatgaacc gtgcgttgta cgttttgcta acccgcagga
     1021 aggttctgtt gtttttgacg atcagatccg tggtccgatc gagttcagca accaggaact
     1081 ggacgatctt attatccgcc gtaccgatgg ttccccaacc tataacttct gtgtggttgt
     1141 cgatgactgg gatatggaaa tcacccacgt tatccgtggc gaagaccata tcaacaacac
     1201 gccacgccag atcaacattc ttaaggccct gaaagcgccg gtgccggttt acgcgcacgt
     1261 ttctatgatc aacggcgatg acggtaaaaa actgtccaaa cgtcacgggg cggtcagcgt
     1321 aatgcagtat cgtgatgacg gttatttgcc agaagcactg ctgaactatc tggtgcgtct
     1381 gggctggtcc cacggcgatc aggaaatctt cactcgtgaa gagatgatca aatacttcac
     1441 cctgaatgcc gtcagcaaat ctgccagtgc gttcaacacc gacaagctgc tgtggctgaa
     1501 ccatcactac attaacgcgc tgccgccgga gtatgttgct actcacttac agtggcacat
     1561 tgagcaggaa aatatcgata cccgtaacgg cccgaagctg gctgatctgg tgaaactgct
     1621 gggcgaacgc tgcaagacgc tgaaagagat ggcacagagc tgccgttatt tctacgaaga
     1681 ttttgctgag ttcgatgccg acgccgcgaa aaaacatctg cgtccggtag cgcgtcagcc
     1741 gctggaagtg gttcgtgaca aactggccgc gattactgac tggaccgctg aaaacgttca
     1801 tcacgctatt caggcgacgg cggatgagct ggaagtgggt atgggtaaag ttggtatgcc
     1861 gctgcgtgtc gccgtaaccg gtgcggggca gtctccggca ctggatgtta ccgttcacgc
     1921 aattggtagg acccgcagta tcgagcgtat caacaaagcg ctggctttta ttgctgaacg
     1981 cgaaaaccag cagtaattag cgcataaaag ataaacggca ggagataata tcctgccgtt
     2041 ttttatttat gctgattcgt caatatcgag acgggcgagg aaattgcgaa ttccttcacg
     2101 tgacaaaaat tgcgcgactt tttcctgctc aatgtctgtc atattatcta tcgcgttgat
     2161 gatttgtcga tacgccgggg cgcgtgctcc aggagcgtat tcagcaattc tctcttcagc
     2221 ttccatcaac attggtgtgt tatggaaggc tggcgtgttc tgaataaact cgcaaacttg
     2281 cgtatcgacc agaataagtc tggcacgacc gcctttcacg ccgggaaatt tttccgtttt
     2341 ccagcctttt tctctgatcc aacggttaac agtttgttta gccacaccga ggcattcagc
     2401 cagttcttcg gtggtcattt tattgcgtaa tcttttcata ttatttgcta tcgcgaatcc
     2461 ctaagccttg taacaatccg ataatccctt cccgcagaag caaggatgta aactgttttt
     2521 gttcaactgg cgtcatctct ttcgccagtg tcaccagcaa tacttcaagc ggcgcatcac
     2581 cagaaagggc aggcgcttct ccctgacctt ctggacgttc agcattgcga atatattcac
     2641 gaacctgttc attgacgtga accagtcggg ctttgccacc ctggacgcca ggttttggtg
     2701 acgttgtcca gccttccttg cgtacccatt tattaatggt ctggcggcta tagccggtca
     2761 gtctggcaag ttcatctggt gtcatcctct ccttgaacat aacaattccc tgaatgtatg
     2821 tgggtctatt agtagttcat tttataacac cactttacag gaaaccgtga catgaataac
     2881 tactgaatgc gagcggtttt ccaaaattgt tcatttgcct gatttttcag cgattgaaac
     2941 tacacgttgc aatttgccgt tgacacattc gggcggaatt catatgatgc cgcccgtcaa
     3001 ctcaacaagc tttacgtgac ggggctatag ctcagctggg agagcgcttg catggcatgc
     3061 aagaggtcag cggttcgatc ccgcttagct ccaccaaatt ttgcacccag caaatttggt
     3121 acgtaaacgc atcgtggggc tatagctcag ctgggagagc gcttgcatgg catgcaagag
     3181 gtcagcggtt cgatcccgct tagctccacc aaatttccaa ccctcgctgc aaagcggggg
     3241 ttttttgtct ctgctttttg ccgcttttgt aatacagtct acgtccgggt tagtgccgcc
     3301 tggtgaaagc atcattggat gaaaaatcgg caacaggctg gccccctgtt tgcttcgcga
     3361 tgcgaataaa cttattattt gtgtgcctga aaaccccgat cagtgagagt agtgtactca
     3421 tgtttgtgga gcataacctg ataaaaaata tcaagatatt cacactagcg tttacgctca
     3481 ccgtggtact tattcagcta tcccgtttta tttcgccact tgccattatc cattccagtt
     3541 atatctttct ggcgtggatg ccactgtgcg taatgctgtc aatcttgttt atctttggct
     3601 ggcgaggtgt cgttcccgtt ttatgcggga tgttttgcac caatctgtgg aac
//
LOCUS       DADMHC010000269         3631 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.272, whole genome shotgun sequence.
ACCESSION   DADMHC010000269 DADMHC010000000
VERSION     DADMHC010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3631)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3631)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3631
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.272"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..202)
                     /locus_tag="JNZ57_003859"
     CDS             complement(<1..202)
                     /locus_tag="JNZ57_003859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709350.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829887.1"
                     /translation="MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTAT
                     FGNYAYLRAEKLGQLDNFFTHIC"
     gene            complement(367..558)
                     /locus_tag="JNZ57_003860"
     CDS             complement(367..558)
                     /locus_tag="JNZ57_003860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829888.1"
                     /translation="MGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAY
                     QPRRETFRRLYQQLLPLMA"
     gene            complement(491..1819)
                     /gene="xylB"
                     /locus_tag="JNZ57_003861"
     CDS             complement(491..1819)
                     /gene="xylB"
                     /locus_tag="JNZ57_003861"
                     /EC_number="2.7.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005054141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylulokinase"
                     /protein_id="HAY8829889.1"
                     /translation="MYIGIDLGTSGVKVILLNEQGEVVASQTEKLTVSRPHPLWSEQD
                     PEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCA
                     QECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRM
                     TGEFASDMSDAAGTMWLDVAKRDRSDVMLQACDLSRDQMPALYEGSEITGALLPEVAK
                     AWGMATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHS
                     FCHALPQRWHLMSVMLSAASCLDWVAKLTGLCNVPALIAAAQQADESAEPVWFLPYLS
                     GERTPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTL
                     IGGGARSEYWRQMLADISGQQLDYRTGGSGASTGRSKAGADCGESREIAH"
     gene            complement(1891..3213)
                     /gene="xylA"
                     /locus_tag="JNZ57_003862"
     CDS             complement(1891..3213)
                     /gene="xylA"
                     /locus_tag="JNZ57_003862"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HAY8829890.1"
                     /translation="MQAYFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRF
                     AACYWHTFCWNGADMFGVGAFNRPWQQPGEALALAKRKADVAFEFFHKLHVPFYCFHD
                     VDVSPEGASLKEYINNFAQMVDVLAAKQEESGVKLLWGTANCFTNPRYGAGAATNPDP
                     EVFSWAATQVVTAMEATHKLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVE
                     HKHKIGFQGTLLIEPKPQEPTKHQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAG
                     HSFHHEIATAIALGLFGSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTG
                     GLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAARMIEDGELDKRIAQRYSGWNS
                     ELGQQILKGQMSLADLAKYAQEHNLSPVHQSGRQEQLENLVNHYLFDK"
BASE COUNT          950 a          984 c          808 g          889 t
ORIGIN      
        1 ggcagatatg ggtaaaaaaa ttatccagtt gcccgagttt ttctgcgcga agatatgcat
       61 agttaccaaa agttgctgtc attaacacgc caagaaaata gccttttcca cttagcaatg
      121 ggcatgagat ccatagccca accagataaa ccagcgcccc gacaacaaat aatagttttg
      181 ccacagtttt tgaggttttc ataacgatct ccatatctac cagcgataca ttacgagtaa
      241 ccaacgaaag acaaaactga aaaatgccat taacaaatga ttttcagaat aaattcatac
      301 taaatattaa ttagtgagat atatagatgt gaattatccc ccacccggtc aggcagggga
      361 taacgtttac gccattaatg gcagaagttg ctgatagagg cgacggaacg tttcacgtcg
      421 tggctgataa gcggcataac gctgcgcatc tggtagatgc gactgttcta acggtagctg
      481 cggcaacaac tcaatgagcg atttctctgg attcgccgca atctgcgcca gccttgctgc
      541 gcccagtgct ggccccactt ccccccgtac ggtaatcgag ctgctgaccg ctgatatccg
      601 ccagcatctg acgccagtac tcactacgcg ccccgccacc aatcaacgta acactttgcg
      661 gtttaatgcc gcaggcatgc acgacatcca tgccatctgc cagcgcataa cccacgcctt
      721 ccagcactgc tcgcgccagt tcattggggc catgttgatg agtcaaacca aagaaaaccc
      781 ccttcgcctg gggattattg tgtggtgtac gctcgccgga aagataaggc agaaaccaaa
      841 ctggctcggc actttcatca gcctgttgag ctgcagcgat taaagctggg acattgcaca
      901 ggccggttaa tttcgcgacc caatccagac acgatgctgc actcagcatt acagacatta
      961 aatgccaacg ctgcggtagc gcatggcaaa agctgtgtac agcgctttct ggcttgctta
     1021 agaacccttc gctgacagca aaatagaccc ccgacgtccc cagcgataac attgcctgat
     1081 tagcatcaac cattcccaca ccaactgcac cagctgcatt gtcgccaccg cctgcgacaa
     1141 ctggcaccgt cgccataccc cacgctttcg caacttcagg taacaaagca ccagtaattt
     1201 cgctgccttc gtataatgcg ggcatctggt cacgagataa gtcgcaagcc tgcagcatga
     1261 cgtcactccg gtcacgcttt gcgacatcca gccacatggt gccagctgcg tcagacatat
     1321 cgctggcaaa ctcccccgtc atacgcagac gcaagtaatc tttcggtaat aatactttgt
     1381 cgatttgacg gaatatctcc ggctcatgcc gctgaaccca tagcaattta ggcgcagtaa
     1441 atccgggcat catcaggttg ccggtaatca ctcgtgattg cggaactctc gcttccagca
     1501 aagtgcactc ttgcgcacag cgcccgtcgt tccacaaaat ggcagggcgc aatacccgtt
     1561 gttgagcatc cagtaaggtt gctccatgca tctggccggc aatacccaat gctttaacgt
     1621 cctgcagaga atgctgatcg cccagagctt tcattgcgcg atcagttgcc tgccaccact
     1681 gttccgggtc ttgttccgac cagagtggat gcgggcgcga aacggtcagc ttttccgttt
     1741 gcgaagcaac cacctcaccc tgctcgttga gcaaaataac ttttacgccc gaggtgccaa
     1801 gatctatccc gatatacata tcgatcgttc cttaaaaaaa tgcccggtat cgctaccgat
     1861 aaccgggcca acggactgca cagttagccg ttatttgtcg aacagataat gatttaccag
     1921 attttccagt tgctcctggc gaccactctg atgcaccgga gacaaattat gttcctgagc
     1981 atatttggct aaatctgcca gtgacatttg gcctttcagg atttgctggc ccaattcgct
     2041 attccagccg gaataacgct gcgcgatgcg tttatccagc tcgccatctt caatcatgcg
     2101 cgctgcaatt ttcagcgcca gtgccatcgt atccatcgcg ccgatatgac cgtaaaacag
     2161 atcatattta tcagtacttt gacgacgtac tttggcatcg aagttcagac caccggtggt
     2221 gaaaccgcct gctttgagaa tttcatacat caccagcgca ttctcttcca cactgttcgg
     2281 gaactggtcg gtgtcccagc ccagttgcgc atcgccacgg ttggcgtcga cagaaccgaa
     2341 caggccaagc gcaatggcgg tggctatttc atgatggaaa gagtgacctg ccagcgtcgc
     2401 gtggttagct tcaatgttca gtttaatctc tttttccaga ccaaactgtt tcaggaagcc
     2461 atagaccgtc gcggcatcgt aatcatattg atgtttagtc ggttcttgcg gtttcggttc
     2521 gataagcaac gtgccctgga agccgatttt atgtttatgc tcaaccacca tctgcataaa
     2581 gcggcccagt tgttcacgct cctgacgcaa gtcggtattt aacagcgttt cgtaaccttc
     2641 acgaccaccc cacaggacat agttttcacc gcccaattta tgggttgctt ccatcgctgt
     2701 aacaacttgc gttgccgccc agctgaagac ttcaggatct gggttcgtcg ccgcacccgc
     2761 gccatagcga gggtttgtaa agcagttagc ggttccccac agcagcttca cgccgctctc
     2821 ttcttgcttg gctgccagga catcaaccat ttgcgcaaaa ttattgatgt actcttttaa
     2881 cgacgcgccc tcaggggaaa catccacatc gtggaagcaa taaaatggca catgtaactt
     2941 gtggaaaaac tcaaatgcga catctgcttt acgcttcgcc aacgccagtg cctcaccagg
     3001 ctgctgccac ggacgattaa acgcccccac accaaacatg tccgccccgt tccagcagaa
     3061 ggtgtgccag tagcaggcgg caaaacgcaa gtgctcttcc atacgcttac ccaacaccag
     3121 ttcgtcggga ttgtagtgac ggaatgctaa cgggtttgag gattttgagc cttcataacg
     3181 aacgcgatcg agctggtcaa aataggcttg catattgaac tccataatca ggtaatgccg
     3241 cgggtgatgg atgatgtcgt aatattgggc actccctttc agttgctcaa ttatgttatt
     3301 tcacactgct attgagataa ttcacaagtg tgcgctcgct cgcaaaataa aatgggatga
     3361 tgaaactggg taattcctcg aagataaaaa tgcaataagt acaattgcgc aacaaaagta
     3421 agatctcggt cataaatcaa gaaataaacc aaaaatcgta atcgaaagat aaaaatctgt
     3481 aattgttttc ccctgtttag ttgctaaaaa ttggttacgt ttatcgcggt gattgttact
     3541 tattaaagct gtcctctaac tacagaaggc cctacaccat gaaaataaag aacatgaggt
     3601 gtactggcaa tagcggacac taccatttgt t
//
LOCUS       DADMHC010000270         3624 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.273, whole genome shotgun sequence.
ACCESSION   DADMHC010000270 DADMHC010000000
VERSION     DADMHC010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3624)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3624)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3624
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.273"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..809
                     /locus_tag="JNZ57_003863"
     CDS             <1..809
                     /locus_tag="JNZ57_003863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF945 domain-containing protein"
                     /protein_id="HAY8829891.1"
                     /translation="RFGYAANQIRRDRPLTHEELIRHVPSIFGEDRHTSRSERYAYIP
                     TITVLENLQREGFQPFFACQTRVRDPGRRGYTKHMLRLRRAGEINGEHVPEIILLNSH
                     DGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVEKVIEGAYEVVGVFDRIEE
                     KRDAMQSLVLPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQT
                     IQENMLKGGISGRSAKGKRIHTRAIHSIDTDIKLNRALWVMAETMLESLR"
     gene            891..1370
                     /locus_tag="JNZ57_003864"
     CDS             891..1370
                     /locus_tag="JNZ57_003864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antirestriction protein"
                     /protein_id="HAY8829892.1"
                     /translation="MKTVSQNTPTIYSATTPENNPPQLVASLVPDEQRINFWPQHFGL
                     IPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNAMN
                     GNRAEMSPEAAGIAACLMTYSHHACRTENYAMTVHYYRLRDYALQHPECSAIMRIID"
     gene            1386..1862
                     /locus_tag="JNZ57_003865"
     CDS             1386..1862
                     /locus_tag="JNZ57_003865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RadC family protein"
                     /protein_id="HAY8829893.1"
                     /translation="MQQLSFLPGEMTPGERSLIQRALKTLDRHLHEPGVTFTSTRAAR
                     EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAA
                     VVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL"
     gene            1925..2146
                     /locus_tag="JNZ57_003866"
     CDS             1925..2146
                     /locus_tag="JNZ57_003866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF987 domain-containing protein"
                     /protein_id="HAY8829894.1"
                     /translation="MKIITRGEAMRIHQQHPTSRLFPFCTGKYRWHGSAEAYTGREVQ
                     DIPGVLAVFAERRKDSFGPYVRLMSVTLN"
     gene            2220..2588
                     /gene="cbtA"
                     /locus_tag="JNZ57_003867"
     CDS             2220..2588
                     /gene="cbtA"
                     /locus_tag="JNZ57_003867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV toxin-antitoxin system toxin CbtA"
                     /protein_id="HAY8829895.1"
                     /translation="MSDTLSGTTLPDDNHDRPWWGLPCTVTPCFGARLVQEGNRLHYL
                     ADRAGIRGLFSDADAYHLDQAFPLLMKQLELMLTSGELNPRHQHTVTLYAKGLTCKAD
                     TLSSCGYVYLAVYPTPEMKN"
     gene            2677..3051
                     /gene="cbtA"
                     /locus_tag="JNZ57_003868"
     CDS             2677..3051
                     /gene="cbtA"
                     /locus_tag="JNZ57_003868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV toxin-antitoxin system toxin CbtA"
                     /protein_id="HAY8829896.1"
                     /translation="MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTLNDTPFA
                     DERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGFSACTRSQLINSIDILRARRATG
                     LMTRDNYRTVNNITLGKYPEAK"
     gene            3048..3242
                     /locus_tag="JNZ57_003869"
     CDS             3048..3242
                     /locus_tag="JNZ57_003869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310834.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829897.1"
                     /translation="MMTLEADSVNVQALDMGHIVVDIDGVNITELINKAAENGYSLRV
                     VDDRDSTETPATYASPHQLL"
     gene            3255..3368
                     /locus_tag="JNZ57_003870"
     CDS             3255..3368
                     /locus_tag="JNZ57_003870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001161660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF957 domain-containing protein"
                     /protein_id="HAY8829898.1"
                     /translation="MQGIVPLTTETALLSCIKQAREDVLTLRHLQLLHQNR"
BASE COUNT          882 a          990 c          928 g          824 t
ORIGIN      
        1 gtcgttttgg ttatgctgca aaccagatac gccgtgaccg tccgctgaca catgaagaac
       61 tgatacgcca tgtacccagt atttttgggg aagaccggca cacctcccgc agtgaacggt
      121 atgcgtacat tcccaccatt accgtcctgg aaaatctgca gcgggaaggc tttcagccgt
      181 tcttcgcctg ccagacccgt gtgcgcgacc cgggccgccg gggatacaca aaacacatgc
      241 tgcgtctgcg gcgggccgga gagataaacg gagaacatgt ccctgaaatt attctgctca
      301 actctcatga cggtacctcc agctaccaga tgctgccggg ttacttcagg ttcgtctgcc
      361 agaacgggtg cgtctgtggc cagtctctgg gggaagtgcg tgttccacac cggggaaatg
      421 tagtggagaa agttatcgaa ggggcttacg aggtggtggg cgtgtttgac cggatagagg
      481 agaagcgtga tgccatgcag tcgctggtcc tgccgccacc ggcacgccag gcgctggcac
      541 aggcggcact gacttaccgt tatggtgacg aacatcagcc cgtcaccacc gccgacattc
      601 tgacgccgcg acgccgggag gattacggta aggacctgtg gagcgcatat cagaccatcc
      661 aggagaatat gctgaaaggc gggatttccg gtcgcagtgc aaaaggaaaa cgtatccata
      721 cccgggccat tcacagcatt gataccgaca ttaagctcaa tcgcgcattg tgggtgatgg
      781 cagaaacgat gctggagagc ctgcgctgat gccgtttccc tgagtgaggg aatcattcag
      841 ctttcgttcc tgaaaaacac acatttattt gttatttaag gagttatctc atgaaaaccg
      901 tttctcagaa tacccccaca atttattcag ctacaacacc agagaataat ccgcctcagt
      961 tggttgccag cctcgtccct gatgaacagc gcatcaactt ctggccgcag cattttggcc
     1021 tcattccaca gtgggtgacc ctggagcccc gtgtcttcgg ctggatggac cgtctgtgcg
     1081 aagactactg cggtggtatc tggaatctgt acaccctgaa caacggcggg gcatttatgg
     1141 cacccgaacc ggatgacgat gatgacgaaa catgggtact gttcaatgcc atgaacggta
     1201 accgcgcaga aatgagcccg gaagccgccg gtattgccgc ctgtctgatg acgtacagtc
     1261 atcatgcctg tcgtacggag aattatgcca tgacggtcca ttattaccgg ttgcgggatt
     1321 acgccctgca gcatccggaa tgcagcgcca ttatgcgcat catcgactga atggagagaa
     1381 gcacaatgca acaactttcc tttctgcccg gagagatgac tcccggcgag cgcagcctca
     1441 ttcaacgggc cctgaaaacc ctggaccgcc atcttcatga acccggcgtg accttcacct
     1501 ccacccgtgc agcacgggaa tggctgattc tgaacatggc gggactggag cgtgaagaat
     1561 tccgggtgct gtatctgaac aaccagaatc agctgattgc cggtgaaacc ctcttcaccg
     1621 gcaccatcaa ccgcacggaa gtccatcccc gggaagtgat taaacgcgcc ctgtaccaca
     1681 atgccgctgc cgtggtactg gcacacaatc acccgtccgg tgaagtcaca cccagtaagg
     1741 cagaccggct tatcaccgaa cgtctggtac aggcactggg cctggtggat atccgggtgc
     1801 cggaccatct gatagtcggt ggcaaccagg ttttctcctt tgccgaacat ggtctgcttt
     1861 aacccttcac aaccacatca cacctgtttt cacttttatc ttctgtcttc agaggtatcc
     1921 cattatgaaa attatcaccc gtggtgaagc catgcgtatt caccaacaac atccgacatc
     1981 ccgtcttttt ccgttctgta ccggtaaata ccgctggcac ggcagtgctg aagcgtatac
     2041 cggtcgtgaa gtgcaggata ttcccggtgt gctggccgtg tttgctgaac gccgtaagga
     2101 cagttttggt ccgtatgtcc ggctgatgag cgtcaccctg aactgagtgg gaattctgat
     2161 gagcagaatt atcgccacta ccggaccatt cttagccgat tttctgtaag gattttatcg
     2221 tgtcagacac actctccggg acaacacttc ccgacgacaa tcacgaccgc ccctggtggg
     2281 ggctgccctg caccgtgacg ccctgtttcg gggcacgtct ggtgcaggag ggtaaccggt
     2341 tgcattacct tgccgaccgc gccggtatca gaggcctgtt cagcgatgca gatgcgtacc
     2401 acctggacca ggcctttccg ctgctgatga aacaactgga actcatgctc accagcggtg
     2461 aactgaatcc ccgccatcag cataccgtca cgctgtatgc aaaagggctg acctgcaaag
     2521 ccgataccct cagcagttgt ggttacgttt atctggctgt ttatccgacg cccgaaatga
     2581 aaaattaact ctccagaata gccttctgct acggcctggt gttttcacca cgccactttt
     2641 ccatttttat atctgcatat caggaaaatc ttcagtatga aaacattacc tgtattaccc
     2701 gggcaggcgg ccagttctcg cccgtctcct gttgaaatct ggcagatact gctgtcccga
     2761 ctgctggacc agcactatgg cctcacactg aatgacacac cttttgccga tgaacgtgtg
     2821 attgagcagc atattgaggc aggcatttca ctgtgtgatg cggtgaactt tctcgtggaa
     2881 aaatacgcgc tggtgcgtac cgaccagccg ggattcagcg cctgtacccg ctctcagtta
     2941 ataaacagca tcgatatcct ccgggctcgc agggcgaccg gcctgatgac ccgcgacaat
     3001 tacagaacgg taaataacat taccctgggt aagtatccgg aggcgaaatg atgacactgg
     3061 aagccgacag cgttaacgta caggcgctgg atatgggaca cattgtcgtt gacattgatg
     3121 gtgttaatat cactgaactg attaataagg ccgctgaaaa cggttattca ctccgcgtgg
     3181 tggatgaccg tgactctacc gaaacaccgg caacttatgc cagccctcac cagttgctgt
     3241 aagacaatgc agtgatacag ggtatagtgc cattaaccac agaaacagca ctgttgtcct
     3301 gtattaagca ggcaagagaa gatgtcctta ccctgcgcca tctgcagctt ctgcaccaga
     3361 accggtgaat ctcactcaac aggcttcatt tctcctgacg ccagcctgaa tacagctggc
     3421 gttttcattt ataaacagaa aggaaaaccg ataataatgg aatggacgcc ccgaccatga
     3481 agcaacggta ggatattact gataaacctt ccagtggagg tgcgttatgg ccgttttaac
     3541 gattagcatt gacctgacaa aaaatgaatt ccaaatccac ggtctgggta ggaacagaaa
     3601 aatctaagct cagaaaacgg atta
//
LOCUS       DADMHC010000271         3619 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.274, whole genome shotgun sequence.
ACCESSION   DADMHC010000271 DADMHC010000000
VERSION     DADMHC010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3619)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3619)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3619
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.274"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            124..381
                     /locus_tag="JNZ57_003871"
     CDS             124..381
                     /locus_tag="JNZ57_003871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2534 family protein"
                     /protein_id="HAY8829899.1"
                     /translation="MIMAKLKSAKGKKFLFGLLAVFIIAASVVTRATIGGVIEQYNIP
                     LSEWTTSMYVIQSSMIFVYSLVFTVLLAIPLGIYFLGGEEQ"
     gene            complement(443..1381)
                     /gene="uspE"
                     /locus_tag="JNZ57_003872"
     CDS             complement(443..1381)
                     /gene="uspE"
                     /locus_tag="JNZ57_003872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspE"
                     /protein_id="HAY8829900.1"
                     /translation="MAMYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDF
                     SYEMTTLLSPDERTAMRQGVISQRTAWIHEQAKYYLNAGVPIEIKVVWHHRPFEAIIQ
                     EVISGGHDLVLKMAHQHDRLEAVIFTPTDWHLLRKCPSPVWMVKDQPWPEGGKALVAV
                     NLASEEPYHNALNEKLVKETIELAEQVNHTEVHLVGAYPVTPINIAIELPEFDPSVYN
                     DAIRGQHLLAMKALRQKFGINENMTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGI
                     SAAFLSNTAEQVIDHLRCDLLVIKPDQYQTPVELDD"
     gene            complement(1533..2285)
                     /locus_tag="JNZ57_003873"
     CDS             complement(1533..2285)
                     /locus_tag="JNZ57_003873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007849744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FNR family transcription factor"
                     /protein_id="HAY8829901.1"
                     /translation="MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDN
                     IIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFD
                     AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILL
                     LSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRF
                     QKSGMLAVKGKYITIENNDALAQLAGHTRNVA"
     gene            complement(2480..2995)
                     /gene="ogt"
                     /locus_tag="JNZ57_003874"
     CDS             complement(2480..2995)
                     /gene="ogt"
                     /locus_tag="JNZ57_003874"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HAY8829902.1"
                     /translation="MLRLLEEKIATPLGPLWVICDEQFRLRAVEWEEYSERMVQLLDI
                     HYRKEGYERISATNPGGLSDKLSDYFAGNLSIIDTLPTATGGTPFQREVWKTLRTIPC
                     GQVMHYGQLAEQLGRPGAARAVGAANGSNPISIVVPCHRVIGRNGTMTGYAGGVQRKE
                     WLLRHEGYLLL"
     gene            complement(3006..>3619)
                     /locus_tag="JNZ57_003875"
     CDS             complement(3006..>3619)
                     /locus_tag="JNZ57_003875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415852.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="p-aminobenzoyl-glutamate transporter"
                     /protein_id="HAY8829903.1"
                     /translation="PLIILFFFVVSLAYGIATRTIRHQADLPHLMIEPMKEMAGFIVM
                     VFPLAQFVAMFNWSNMGKFIAVGLTDILESSGLSGIPAFVGLALLSSFLCMFIASGSA
                     IWSILAPIFVPMFMLLGFHPAFAQILFRIADSSVLPLAPVSPFVPLFLGFLQRYKPDA
                     KLGTYYSLVLPYPLIFLVVWLLMLLAWYLVGLPIGPGIYPRLS"
BASE COUNT          966 a          860 c          880 g          913 t
ORIGIN      
        1 actaatcaat gcgttgattg taaatccagc taagaggtga ggttttcaga gcagacaacg
       61 gtgaaatgtc atggtattgt tacgtttagg taacgagaaa tttgtctgca caaggattac
      121 atcatgatta tggcgaaact gaagtcagcg aaagggaaga aatttctctt tggtttgttg
      181 gcggttttca ttattgcggc gtcggttgtg actcgcgcga ctatcggcgg cgttatagaa
      241 cagtacaata ttccgctgtc tgagtggacg acatcaatgt atgtgattca gtcatcgatg
      301 atttttgttt atagcctggt ctttactgtg ttgctggcaa tcccgttggg aatttatttc
      361 cttggcggcg aagagcagta agtaaaaaat aggcccgata actcgggcct tgtcagttat
      421 tgaagagtcg ttaatcgtct tcttagtcat ccagttcaac gggtgtctga tactggtcag
      481 gtttaatgac caacagatcg cagcgaagat gatcaatcac ctgttccgcc gtgttgctga
      541 ggaatgctgc tgaaataccg gtgcgtccta ccgtgcccag aaccacaatc cccgcctgta
      601 agtgctccgc caaatcagga ataacctctt cgggcagacc tttttctacg tgcgtcatgt
      661 tttcattaat gccgaatttc tgccgcaggg ctttcattgc cagcaaatgt tgcccacgaa
      721 tggcatcgtt ataaacgctc ggatcaaatt ccggcagttc aatcgcgata ttaattggcg
      781 ttactgggta agcgccaacc agatgaactt cggtatggtt gacttgttct gccagttcga
      841 tcgtctcttt gaccagtttt tcattgagcg cattatgata cggctcttca ctggcgagat
      901 tcaccgccac cagcgcctta cctccttccg gccacggctg gtctttcacc atccacaccg
      961 ggcttgggca tttgcgtaac agatgccagt ccgttggagt aaaaatcacc gcttccagac
     1021 ggtcatgttg gtgcgccatt tttagcacca aatcgtgccc gccgctgatc acttcctgaa
     1081 tgatggcttc gaaaggacgg tgatgccaga ccactttaat ttcaatggga acgccagcat
     1141 tgagataata ttttgcctgc tcgtggatcc aggctgtacg ctggctgatg acgccctgac
     1201 gcatagcggt acgttcgtcc ggggagagca gggtggtcat ttcgtatgag aagtcataga
     1261 tcggcaaaaa ggctttaatt ttgccaccaa tccgttgatg taaataaaca gctcgccgca
     1321 atgctggttg gtcgtcctgg ttaggatcga taacaacgag catgttctga tacatagcca
     1381 tacagggtct ccttacaaca actgtcaacg cagtttgtaa ttaaaagatt aacccatatc
     1441 tggtgaatga aacagtgatg aaccttctgc cagatcaata aatcagaaaa atttaatgat
     1501 atgacagaag gatagtgagt tatgcggaaa aatcaggcaa cattacgcgt atgaccagca
     1561 agctgggcca gcgcatcgtt attttcgatg gtgatgtatt tacctttgac tgccagcata
     1621 ccgcttttct ggaagcgacc tagcagacgg ctgatggttt ctaccgtcag gcccagatag
     1681 ttaccgatat cgccacgagt catcgtcagg cggaattcac gaggggagaa gccgcgttgg
     1741 gcaaaacgac gggacaggtt gtagatgaat gcagccagac gttcctcggc atttttcttc
     1801 gacaacagca ggatcatgtc ctgatcgcct ttgatttcac cgctcatcag acgcatcatc
     1861 tgctgacgca gattcggcat tttaccggac aaatcgtcca gcgtttcgaa cgggatttca
     1921 cataccatcg aggtttccag cgcctgagcg aagctcgggt gatggccgct gccgatggcg
     1981 tcaaatccca ccaggtcgcc agctaaatgg aaaccagtga tttgctcgtc gccttgctca
     2041 gtgatggtat aacttttaat cgtaccggag cggatggcat aaagcgattt aagttcatca
     2101 ccagccttaa acagcgtctg gcctttctga ataggcttct tccgctcaat gatattatca
     2161 agctgatcaa gctcatgttc gttgagtgtg aacgggatgc aaagctggct gatgctgcaa
     2221 tcctggcaat ggatagcaca accgccagac tgaatgcgcc gtataattcg cttttccggg
     2281 atcataggtc tgctcaagcc gtaattgata tttgtcaatt ttaacatctt tttagggagc
     2341 aagtaagtct aagcaaacct taacagcaga gaattccgat attagatgta aatatatgtc
     2401 tatctatttg aaaaccatta agttgttaag ggtaacttta cataaaagtg tgaacaagct
     2461 ggcacaaatt gtttaatgtt tacagcaaaa gataaccttc gtggcgcaat aaccactctt
     2521 ttcgctgaac tccgcctgca tatccggtca tggtgccgtt tcggccaata acccgatggc
     2581 aaggtacgac gatgctgatg ggattcgatc cgtttgccgc accaacggca cgcgccgcgc
     2641 cagggcggcc caattgttca gccagttggc cgtaatgcat tacctgcccg caggggatag
     2701 tgcgtagagt tttccagact tcgcgctgaa atggcgtccc ccctgtggca gtgggaagcg
     2761 tatcaataat gctaagatta ccggcaaaat aatcactaag cttgtcgctt aaaccgcctg
     2821 ggttggtggc agaaatgcgc tcatagcctt ctttgcgata atggatgtcc agcagctgca
     2881 ccatgcgttc gctgtactct tcccattcaa ccgcccgcag gcgaaattgc tcatcgcaaa
     2941 tcacccacag tggacccagt ggcgtggcaa ttttttcttc aagtaatctc agcatccgtt
     3001 ctctcttaag acaaacgtgg gtaaatcccc ggacctatcg gcagaccaac aagataccac
     3061 gccagcaaca tcagcagcca taccaccaaa aagataagcg gatagggcaa gactaacgaa
     3121 tagtaagtac ccagtttcgc gtctggtttg tagcgttgca ggaatccaag aaacagtgga
     3181 acaaaaggag ataccggcgc taaaggcaat acggatgagt cggcaatacg aaagaggatt
     3241 tgcgcaaatg ccgggtgaaa gccaagtagc ataaacattg gtacgaaaat gggggccaga
     3301 atcgaccaga ttgcggaacc actggcaata aacatgcata agaaagagga aagcaacgcc
     3361 agaccgacaa acgccgggat gccgctaagc cctgaacttt ccagtatatc ggtcagcccc
     3421 acggcgatga atttccccat gttgctccag ttaaacatgg cgacaaactg ggcgagggga
     3481 aaaaccatca cgataaatcc cgccatctct ttcatcggtt caatcattaa atgcggtaaa
     3541 tccgcctgat gtcgaattgt gcgggtagcg atgccataag ccagcgaaac cacaaagaaa
     3601 aaaagaatga ttagtggca
//
LOCUS       DADMHC010000272         3617 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.275, whole genome shotgun sequence.
ACCESSION   DADMHC010000272 DADMHC010000000
VERSION     DADMHC010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3617
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.275"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            48..638
                     /locus_tag="JNZ57_003876"
     CDS             48..638
                     /locus_tag="JNZ57_003876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2726 domain-containing protein"
                     /protein_id="HAY8829904.1"
                     /translation="MKLIIFILIVLIIAALLIRIILRSVNQHSPLLMQLHAAGIRTGD
                     AERILSSGEYWQRQKTLLTEREVSFMKGLFRIVDMKRWYLCPQVRVADIVQLNGNIRP
                     RSRQWWQLFRMVSQWHVDVVIVELRSFSIVAAVELDDASHLRPERRRRDILLEEVLRQ
                     AGIPLLRSHDARKLLQMTGEWLNTTGADQQSPEHRS"
     gene            878..1138
                     /locus_tag="JNZ57_003877"
     CDS             878..1138
                     /locus_tag="JNZ57_003877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication regulatory protein RepA"
                     /protein_id="HAY8829905.1"
                     /translation="MSQTENAVTSSLSQKRFVRRGKPMTDSEKQMAAVARKRLTHKEI
                     KVFVKNPLKDLMVEYCEREGITQAQFVEKIIKDELQRLDILK"
     gene            1362..1436
                     /locus_tag="JNZ57_003878"
     CDS             1362..1436
                     /locus_tag="JNZ57_003878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RepA leader peptide Tap"
                     /protein_id="HAY8829906.1"
                     /translation="MPGKVQDFFLCSLLLRIVSAGWCD"
     gene            1429..2286
                     /gene="repA"
                     /locus_tag="JNZ57_003879"
     CDS             1429..2286
                     /gene="repA"
                     /locus_tag="JNZ57_003879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858393.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="incFII family plasmid replication initiator
                     RepA"
                     /protein_id="HAY8829907.1"
                     /translation="MTDLQQTYYRQVKNPNPVFTPREGARTLPFCGKLMEKAVGFTSR
                     FDFAIHVAHARSLGLRRRMPPVLRRRAIDALLQGLCFHYDPLANRVQCSITTLAIECG
                     LATESAAGKLSITRATRALTFLAELGLITYQTEYDPLIGCYIPTDITFTSALFAALDV
                     SEEAVAAARRSRVEWENRQRKKQGLDTLGMDELMAKAWRFVRERFRSYQTELKSRGMK
                     RARARRDADRQRQDIVTLVKRQLTREISEGRFTASREAVKREVERRVKERMILSRNRN
                     YSRLATASP"
     gene            complement(3270..>3617)
                     /locus_tag="JNZ57_003880"
     CDS             complement(3270..>3617)
                     /locus_tag="JNZ57_003880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000487120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HAY8829908.1"
                     /translation="LVFQFPIREQAAAFLGVVPVEKYSGTSVRGGPKLSKIGPPEIRA
                     KLYLASLCGLRFNPLMKAMYERLCLRGKAKMCAIGALMRKLVHWCYGVLKTQKPFDVG
                     YLSSYARSACKAA"
BASE COUNT          946 a          933 c          900 g          838 t
ORIGIN      
        1 gtaaggtaat aattcagcaa taattaattg ccaggagcag ataaataatg aagttgatta
       61 tttttattct cattgttctg attattgcag cgctacttat ccggattatc ctcagaagtg
      121 taaatcagca ttctcctttg ctgatgcaat tgcatgcggc aggtatacgg accggtgatg
      181 cagagcgaat actgtccagc ggtgaatact ggcaacgtca gaagacgctg ctgacagaaa
      241 gggaagtcag ttttatgaaa ggactgttca gaattgtgga tatgaagcgg tggtatctgt
      301 gtccgcaggt acgggtcgcg gatatcgtcc agctgaacgg gaatatccgg ccacgatcac
      361 gccagtggtg gcagttattc aggatggtgt ctcagtggca tgttgatgtg gttatcgttg
      421 agctgcgttc gttcagtatt gttgcagcag tagagctgga tgatgccagc catttacgac
      481 cggaacgcag acgccgggat attcttctgg aagaggttct gaggcaggct ggtattccgt
      541 tgctcagaag ccacgatgcc agaaaactgc tgcagatgac cggagaatgg ctgaatacaa
      601 caggggctga tcagcagtca ccggaacatc gtagctgacg ccttcgcgtt gctcagttgt
      661 ccaaccccgg aaacgggaaa aagcaagttt tcctcgctcc ctgcgtttcc ataactgaaa
      721 accatactat ttcacagttt aaatcacatt aaacgacagt aatccccgtt gatttgtgcg
      781 ccaacacaga tcttcgccac aattctcaag tcgctgattt caaaaaactg tagtatcctc
      841 tgcgaaacga tccctgtttg agtattgagg aggcgagatg tcgcagacag aaaatgcagt
      901 gacttcctca ttgagtcaaa agcggtttgt gcgcagaggt aagcctatga ctgactctga
      961 gaaacaaatg gccgctgttg caagaaaacg tcttacacac aaagagataa aagtttttgt
     1021 caaaaatcct ctgaaagatc tcatggttga gtactgcgag agagagggga taacacaggc
     1081 tcagttcgtt gagaaaatca tcaaagatga actgcagaga ctggatatac taaagtaaag
     1141 actttacttt gtggcgtagc atgctagatt actgatcgtt taaggaattt tatggctggc
     1201 cacgccataa ggtggcaggg aactggttct gatgtagatg tacaggagcc agaaaagcaa
     1261 aaaccccgat aatcttcttt aactttggcg agtcagaaag attaccgggg cccacttaaa
     1321 ccgtatagcc aacaatcaag ctatgcgggg agtatagtta tatgcccgga aaagttcaag
     1381 acttctttct gtgctcgctc cttctgcgca ttgtaagtgc aggatggtgt gactgatctt
     1441 caacaaactt attaccgcca ggtaaagaac ccgaatccgg tgttcacacc ccgtgaaggt
     1501 gcccggacgc ttccgttctg cgggaaactg atggaaaagg cggtgggctt cacctcccgt
     1561 tttgatttcg ccattcatgt ggcacatgcc cgttcgcttg gtctgcgtcg gcgcatgcca
     1621 ccggtactac gtcgccgggc cattgatgcg ctgctgcagg ggctgtgttt tcactatgac
     1681 ccactggcca accgcgtcca gtgttccatc accacgctgg ccattgagtg cggactggcg
     1741 acggagtctg ctgccggaaa actctccatc acccgggcca cccgggccct gacgttcctt
     1801 gcagagctgg gactgattac ctaccagacg gaatatgacc cgcttatcgg gtgctacatt
     1861 ccgaccgata tcacgttcac atctgcactg tttgctgccc tcgatgtatc agaggaggca
     1921 gtggccgccg cgcgccgcag tcgtgtggaa tgggaaaaca gacagcgcaa aaagcagggg
     1981 ctggataccc tgggtatgga tgaactgatg gcgaaagcct ggcgttttgt tcgtgagcgt
     2041 ttccgcagtt accagacaga gcttaagtcc cgtggaatga agcgtgcccg tgcgcgtcgt
     2101 gatgcggaca ggcagcgtca ggatattgtc accctggtga aacggcaact gacgcgtgaa
     2161 atctcggaag ggcgcttcac tgccagtcgt gaggcggtaa aacgtgaagt ggagcgtcgt
     2221 gtgaaggagc gcatgattct gtcacgtaac cgtaattaca gccggctggc cacagcttcc
     2281 ccctgaaagt gacctcctca gaataatccg gcacgcgccg gaggcattcg cacgcctgaa
     2341 gcccgccagt gcacaaaaaa tcagcgctac atacaaaaaa caacctcatc atccaccttc
     2401 tggtgcatcc ggtcccccct gtttttgata caaaacacgc ctcacagacg gggaattttg
     2461 cttatccaca ttaaactgca agggacttca ccataaggtt acaaccgttc acgtcataaa
     2521 gcgccagccg tcagccctac agggtgcaat gtatctttta aacacctgtt tatatctcct
     2581 ttaaactact taattacatt catttaaaaa aaaaacctgt tcactgcctg tcctgtggac
     2641 agacagatat gcacctccca ccgcaagcgg cgggccccaa ccgaagccgg tttagttaca
     2701 acatgcaaac ataaacccct aaaaaaccca agtccgacgc agaactgaaa ccgcaaagcc
     2761 cctccctcat aactgaaaag cggccccgcc ccggcccgaa gggccggaac agagtcgctt
     2821 ttaaccatga atgttgtaac tacattatca tcgctgtcag tcctctggct ggacgtatcg
     2881 agtacacgct cgtaagcggc cctcacggcc cgctaacgcg gagatacgcc ccgactgcgg
     2941 ataaaccctt gtcgggctcc gaccgcgcac agaagctctg tcatggctaa aaacgggtat
     3001 ggcttggaag ctaccgtgtt ctgtcaagaa aaatcgcttg aactccgacg tacagccccc
     3061 taagtactgc cagcaagctg tcagcactaa gtccccgata cagcgcggcg tagccgcgct
     3121 aacggggtta aaagggctta cctatacttc atcatcgctg aaagcccgca tggcctcgca
     3181 gggcagggat gggataggtg aaacctatca atacgtaccg gcttacgccg ggcttcggcg
     3241 gtgttactcc tgtaccatat gtaactacat catgccgcct tacatgcgct acgcgcatat
     3301 gaagacaaat agcccacatc aaacggtttt tgggtcttca gtacgccata gcaccagtgc
     3361 acgagttttc tcatcagcgc accaatggca cacattttgg ccttacctct caggcataat
     3421 cgctcataca tcgctttcat caatgggtta aatctcagac cacacaacga agccagatac
     3481 agtttcgccc ggatttccgg cggaccaatt tttgacagtt tcggaccccc tctgaccgag
     3541 gtgccggaat atttttcaac gggaacgaca cctaaaaatg cagccgcctg ttcacgtatg
     3601 ggaaattgaa aaactaa
//
LOCUS       DADMHC010000273         3540 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.276, whole genome shotgun sequence.
ACCESSION   DADMHC010000273 DADMHC010000000
VERSION     DADMHC010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3540)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3540)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3540
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.276"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            231..542
                     /locus_tag="JNZ57_003881"
     CDS             231..542
                     /locus_tag="JNZ57_003881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000483533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HAY8829909.1"
                     /translation="MFNVITHPAALDELLELPDNLRGRMTRLIERLEQEGNKMKMPHS
                     RVIGGGLFELRVGDKNIARTLYAYATGNEIYLLHAFVKKTQKTPTKAIEIARMRLKEM
                     N"
     gene            542..829
                     /locus_tag="JNZ57_003882"
     CDS             542..829
                     /locus_tag="JNZ57_003882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000865085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY8829910.1"
                     /translation="MKVKGVPFSQVKQKLLSTPEAVKGYEDADKELEMVEMLYEMREK
                     AGLTKSALAERMGLRPSAISRLESNPLGASMKTLTKYAHACGATIDIHAVY"
     gene            complement(1367..2554)
                     /locus_tag="JNZ57_003883"
     CDS             complement(1367..2554)
                     /locus_tag="JNZ57_003883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013747467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HAY8829911.1"
                     /translation="MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTT
                     LMGYTQWCCSSPDCCHTKKVCFRCKSRSCPHCGVKAGAQWIQYLLSLVPDCPWQHIVF
                     TLPCQYWSLVFHNRWLLAEMSCIAADVILEICHQADVEPRIFTVIHTWGRDQQWHPHI
                     HLSTTAGGVTSGHTWKNLHFYARKVMSMWRYRITRLLSRKYPDLVMPDALAAEGSSKR
                     EWNRFLDTHYRRGWNVNVSRVMDNATHVAVYFGSYLKKPPVPVSRLEHYAGQDEIGLR
                     YNSHRTKREEYLLMSGDEFMERFSWHVADKGFRMVRYYGFLSPAKRRLLEEVVYIITE
                     TVRKTAMQITWRGMYQRLLKVDPLKCVLCGSQMRFTGLKRGYRLAEQVLMHEPLARMR
                     WCG"
     gene            complement(2554..2919)
                     /locus_tag="JNZ57_003884"
     CDS             complement(2554..2919)
                     /locus_tag="JNZ57_003884"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829912.1"
                     /translation="MARSAKPRKRKPAFQRSKLPRYVVKLHEDDFFDEEDAEVLRFDS
                     FDDAVECCADLNIPFFVDAGNKKLVFWFVRVDDEGYPEIARCTEREFATILSGISAGG
                     MYCPECGTVHWPDGVAPPF"
     gene            2938..3333
                     /locus_tag="JNZ57_003885"
     CDS             2938..3333
                     /locus_tag="JNZ57_003885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858230.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8829913.1"
                     /translation="MTLPVFITVIADHDKPQPSGCLLELQLNKGEYRHKLPRWIFFAN
                     QGEFTTGDYEEIMNKASALSLVSNAILYWNTSRISNIVEGLRENGEVIDDDVLAHISL
                     LPYKHVLPNGTYFVDGEPYGTEPTERAKP"
     gene            3363..3446
                     /locus_tag="JNZ57_003886"
                     /pseudo
     CDS             3363..3446
                     /locus_tag="JNZ57_003886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052676.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
     gene            3446..>3540
                     /locus_tag="JNZ57_003887"
     CDS             3446..>3540
                     /locus_tag="JNZ57_003887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HAY8829914.1"
                     /translation="MEQKWTSKALSDLARLYDFLVLASKPAAARMV"
BASE COUNT          924 a          920 c          836 g          860 t
ORIGIN      
        1 aggtgaaatc tgtcaatcag taccggctta cgccgggctt cggcggtttt actcctgtgc
       61 catatgcaac aacggagtgc cgccttccat gccgctaacg tggcatcaaa aaatccctct
      121 tctccagttg cccccctccg aactcagagt gtattttcat ttattgatga aatttactgt
      181 ttgcgcaatt ttcctgtttt agtgtatttt gtcattctgg aggctataat atgtttaatg
      241 tgattactca cccggccgca ctggatgaac ttctagaatt accagacaat ctgcgtggtc
      301 gtatgaccag actgattgaa cggctggaac aggaaggtaa caaaatgaaa atgcctcaca
      361 gccgtgtaat tggcggaggg ctttttgaac tgagagtcgg ggataaaaat atcgcaagga
      421 cactgtacgc ttatgcaacg ggtaacgaaa tctatctgct gcatgcattt gtgaaaaaaa
      481 cgcaaaagac accaacgaaa gctattgaaa ttgccaggat gcgtctgaag gagatgaact
      541 gatgaaagta aaaggtgttc cattcagcca ggtaaagcaa aaactactca gtactccaga
      601 agctgtcaaa gggtatgagg atgctgacaa agaactggag atggtggaaa tgttatacga
      661 aatgagagaa aaagcgggat taacaaagtc agcactggcc gaacgaatgg ggttacgccc
      721 gtcagccatc agtcgcctgg aaagtaaccc tttaggggcc agcatgaaaa ctttgacaaa
      781 atatgctcat gcctgtggcg caaccatcga tattcacgct gtctattgag gggtccgctt
      841 ggaattcgga aaataaacca cgttaagact attttttaga taaatgactt tcaggaatcg
      901 ccaagatggc gggataacag cggttttggt gtcctaaatc gtacaattct gtacatccac
      961 gcaagggaat gtacggaagt aagccagacg gttatcggac ggtcagaaca tttcgtacag
     1021 cctttacgtt cagtgagtta gctggcctgg acgtaaccac tcgttagctc aattctctta
     1081 gcgtgggaaa atttccgaat tccaagcgga cccctttatc cttgccccgc tgaatgagga
     1141 aacgctgttc cgggggatta tgctgaacgt cttccgttca tcgataggaa ttaaaacccc
     1201 aaaaagatta aaaaaacacc acaaaacgga tgtttcttca acaccacttt tgctcatatg
     1261 aacggaaccg acgattaaac tggatggctc tgattgattc agggtatgaa tggcggtttt
     1321 ttgctccgtt tccctcaaaa tggacgctac ttaccctctg cggctctcag ccgcaccacc
     1381 gcatccgggc cagcggctca tgcatcagga cctgctctgc cagacggtag ccccgcttca
     1441 gccccgtaaa acgcatctga ctcccgcaca gcacgcactt cagcgggtca accttcagta
     1501 acctctgata catccctctc caggtgattt gcatcgccgt ttttctcact gtctccgtta
     1561 tgatgtacac cacttcttcc agtaaccgcc gtttcgccgg actcagaaaa ccgtagtacc
     1621 tcaccatacg gaacccctta tccgccacat gccaggagaa cctttccatg aactcatctc
     1681 cactcatcaa caggtattct tcccgttttg ttcggtgact gttgtaacgc agtccgattt
     1741 catcctgacc ggcataatgc tccagacgac tcaccggcac cggtggcttt ttcaggtaag
     1801 agccaaagta caccgccaca tgggtggcat tatccatcac ccgggatacg ttgacattcc
     1861 agccacggcg gtaatgcgtg tccaggaagc gattccattc ccgtttactg cttccttctg
     1921 ctgccagcgc atccggcatc accaggtcag ggtatttccg tgacagtaac cgtgttatcc
     1981 ggtagcgcca catgctcatc accttacggg cgtaaaaatg aagatttttc caggtgtggc
     2041 ccgacgtcac accaccggca gttgtcgata aatggatatg cggatgccac tgctggtcac
     2101 gcccccatgt gtggatcacc gtgaatatcc tcggctccac atctgcctga tggcagattt
     2161 ccagtatcac atccgctgca atgcagctca tctctgccag caaccaccgg ttgtggaaca
     2221 ccagggacca gtactggcag ggtaacgtga acacaatatg ctgccatggg cagtcgggga
     2281 ccaggctcag cagatactgt atccactgtg cgccagcctt caccccgcag tgcgggcagg
     2341 agcggctttt acaccggaag cagacctttt ttgtatggca acagtccggt gatgaacagc
     2401 accactgtgt ataccccatc agtgtggtcc cgcacgccat gattttggtc accgactcaa
     2461 tcaccaccgg acgtactgcc ccttccggct gcttctccag ccagttaagc cagcggtttc
     2521 cctgctgaaa gatatcggca aaacggggaa gcatcagaag ggcggggcga ctccgtccgg
     2581 ccagtgaacc gtgccacact ccgggcagta cataccgccg gcgctgatac cggaaagaat
     2641 ggtcgcaaat tcccgctccg tgcagcgggc gatttccgga tacccttcgt catcaacacg
     2701 tacaaaccag aagaccagct ttttgtttcc cgcatccaca aagaacggaa tattcaggtc
     2761 tgcgcagcat tcaacggcat cgtcaaaact atcaaagcgc agaacttctg cgtcttcttc
     2821 gtcaaaaaaa tcatcttcgt gaagcttcac gacatagcgg ggaagtttgc ttctttgaaa
     2881 ggcgggttta cgtttacggg gtttagctga acgggccata taaccacctg aaagacaatg
     2941 acattgcctg tttttataac ggtaattgca gaccatgaca agccgcagcc gtcaggctgc
     3001 ctactcgagc ttcagctcaa taaaggcgag tatcgacata aattaccccg atggatcttt
     3061 tttgcaaatc agggtgaatt cacgaccggt gattacgaag aaatcatgaa taaggccagc
     3121 gccctgagtc tggtatcgaa tgcaatcctg tactggaaca catcaagaat aagcaatatt
     3181 gttgaagggt tacgtgaaaa tggtgaggtt attgatgatg acgtattagc ccatatatca
     3241 ttactgccct ataaacacgt attacctaat ggtacttatt ttgttgatgg agaaccttac
     3301 ggtactgagc ctaccgaaag agcaaaaccg taagtttctg ttcaaatgct cccgctggtc
     3361 catccggaca gattatcgac catcaggctg tacaggcctg ggcggacagc ctcagtactg
     3421 acaatccgtt accggtgcca cgctgatgga acagaagtgg accagtaagg cgctttctga
     3481 tttggcgcgg ttatatgatt ttctggtgct ggccagtaaa cctgctgccg ccagaatggt
//
LOCUS       DADMHC010000274         3476 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.277, whole genome shotgun sequence.
ACCESSION   DADMHC010000274 DADMHC010000000
VERSION     DADMHC010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3476)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3476)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3476
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.277"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..449
                     /locus_tag="JNZ57_003888"
     CDS             <1..449
                     /locus_tag="JNZ57_003888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001575625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HAY8829915.1"
                     /translation="PNESDYLKLQSLFARVAEEKHQRRELEKSHYQLVSTYSELSRQY
                     MELLSEYKNLRRYFGVTVQVPYTDVWTYKPVQYYPGKHPCEKPAEMLQQIINASSRPG
                     DQVADFFMGSGSTVKAALALGRRAIGVELETGRFEQTVREVQDLIV"
     gene            499..574
                     /locus_tag="JNZ57_003889"
     tRNA            499..574
                     /locus_tag="JNZ57_003889"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:532..534,aa:Ile,seq:cat)
     gene            581..656
                     /locus_tag="JNZ57_003890"
     tRNA            581..656
                     /locus_tag="JNZ57_003890"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:616..618,aa:Arg,seq:tcg)
     gene            672..748
                     /locus_tag="JNZ57_003891"
     tRNA            672..748
                     /locus_tag="JNZ57_003891"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:706..708,aa:Arg,seq:tct)
     gene            complement(795..982)
                     /locus_tag="JNZ57_003892"
                     /pseudo
     CDS             complement(795..982)
                     /locus_tag="JNZ57_003892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001302519.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1251..1484
                     /locus_tag="JNZ57_003893"
     CDS             1251..1484
                     /locus_tag="JNZ57_003893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000874462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1737 domain-containing protein"
                     /protein_id="HAY8829916.1"
                     /translation="MAFKHYDVVRAASPSDLAERLTQKLKEGWQPFGSPVAITPYTLM
                     QAIAAEGDVTTPVVVKPSDGEGAVISTTSNPEY"
     gene            1518..3212
                     /locus_tag="JNZ57_003894"
     CDS             1518..3212
                     /locus_tag="JNZ57_003894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000323228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialate O-acetylesterase"
                     /protein_id="HAY8829917.1"
                     /translation="MAYGEGLPLPETYDRPDPRIKQLARRSTVTPGGASCNYNDIIPA
                     DHCLHDVQDLSKFSHPKASAAQYGCVGQGLHIAKKLLPFIPANAGILLVPCCRGGSAF
                     LAGDEGTFSESTGASETSARWGVDKPLYKDLLTRTQAALKANPKNILLAVVWMQGEFD
                     LKQGAYATQPGLFDSMVEKYRSDLSEFGGQCLGGSPSSVPWICGDTTYYWKQTYSSQY
                     DAVYGAYKTKSAKKIFFVPFMTDENGRNVGTNEPSEDPDVADIGYYGAGGRTDAKTWT
                     TADRKTHFGSWARRGIISDRLATAILVHAGRTAEFITGKQPDTVKPTGPSGEGTEREP
                     EAPVSNRTLMSLLASGEDLASQGWRYYHKPASGDNVNKNIAEAVVSDAGATGGKALQL
                     NKPENHIWFLEHDAAGQGVELLKKGGRVSVQFKLPGSLVPNRFALGIYWQLSSLPEGV
                     TLAEEGNDMLMSFFLQTDATNLNAMYHKKPNAKLDTFGVFDNGWHTLDFEFAGNNSIQ
                     VTPVLDEKRGTPFTLVKSPASGAADKLQLTGISKAATYTLLIASVKVEVNNADAAA"
     gene            3348..>3476
                     /locus_tag="JNZ57_003895"
     CDS             3348..>3476
                     /locus_tag="JNZ57_003895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1378 family protein"
                     /protein_id="HAY8829918.1"
                     /translation="MTFIHQVMLYFCTAVCVLYLLSGGYRAVRDFWRRQIDKRAAEK"
BASE COUNT          849 a          821 c         1018 g          788 t
ORIGIN      
        1 taccgaacga aagcgattat ctgaaattac agtcgctgtt tgcccgggtg gcagaagaga
       61 aacatcagcg gagagaactg gaaaagtccc attaccaact ggtcagcaca tacagtgagc
      121 tgagccggca gtatatggaa ctgctgagtg aatataaaaa tttgcggagg tatttcggtg
      181 tgacggtgca ggtgccgtac accgatgtgt ggacgtataa accggtgcag tactatccag
      241 ggaaacatcc gtgcgaaaaa ccggcagaaa tgttgcagca gataatcaac gcgagcagtc
      301 gtccgggaga ccaggttgca gattttttta tgggctcagg ttcaacggta aaagcggcac
      361 tggcgctcgg gcgtcgtgcg attggcgttg aactggagac cggacgtttt gagcagacag
      421 tcagggaagt tcaggattta atcgtttgaa acggatgaga ttgcagaatt aattacgcac
      481 cattattatt ctgctcccgg ccctttagct cagtggtgag agcgagcgac tcataatcgc
      541 caggtcgctg gttcaaatcc agcaagggcc accatcacat accgccatta gctcatcagg
      601 aaagagcgcc agccttcgaa gctggttgcg cggagttcgg gtccccgaag gcggttcatt
      661 atctgtatcc tgcgttgtta gctcagccgg acagagcaat tgccttctaa gcaatcggtc
      721 actggttcga atacagtaga acgcgccaca cttattttcc ctggctcgct tttgcgggct
      781 tttttttaaa tgtctcacaa ttcaggcggt tgactgttgt ctggtttgcg gggagtttgt
      841 aaaaagaaac tggcatggtg aatccccctg tgcggagggg caatcagcaa ctggtgtttt
      901 gtcccgaccc ttatcctttc tgtgcgggtt caggtgctga tactgaactc accgggaggc
      961 acccggcacc atgcaatggc acatagcgcc actctccagc ccctctccgg aggggctttc
     1021 ttatggacaa aaaaatcccg cgctgggaga cgcgggcggc aaggaataaa caacaaaacg
     1081 tgaagtaata tttcagctgg cgaataatat ccgacagtaa tcactctgcg caatagcgcg
     1141 gcctttttca tattgcgggc tgttgtctat cttctgccat tgtcctgtaa cttccggact
     1201 tcagcccgct cctcatttta ctcacaatat tatccaggcc gggaggattc atggcattta
     1261 aacactatga cgtggtcagg gcggcgtcgc cgtcagacct tgcggagcga ctgacacaaa
     1321 aactgaagga ggggtggcag ccatttggca gtccggtggc catcacgcct tataccctga
     1381 tgcaggccat tgcggcggaa ggtgatgtca ccacacctgt ggtggtgaag ccgtcggatg
     1441 gagaaggcgc agttatcagc accaccagca acccggagta ttaatttgtt gttgccctgg
     1501 ccgggcagtc aaacggtatg gcgtatggtg aagggcttcc gctgccggag acatatgacc
     1561 gtccggaccc gcgtattaaa cagctggcgc gtcgcagcac tgtcacgccg ggtggtgcgt
     1621 cctgtaacta caatgacatt attcctgcgg accactgcct gcatgatgtt caggatttga
     1681 gtaagttttc acacccgaaa gccagcgcag ctcagtatgg atgcgtgggg cagggattac
     1741 atatcgcgaa gaaattgttg ccgtttattc cggcgaatgc cggtattctt ctggttccgt
     1801 gctgccgtgg tggttctgca tttttggcgg gcgatgaagg taccttcagc gaatccaccg
     1861 gcgcaagcga gacctcggca cgctggggtg tagataagcc actgtacaag gacctgctta
     1921 cccgtactca ggccgcactg aaggctaacc ctaaaaatat tctgcttgca gtggtctgga
     1981 tgcagggcga gtttgatttg aaacagggtg catacgccac tcagccgggg ctgtttgatt
     2041 ccatggtgga aaaatatcgt tctgacctgt cggaattcgg aggtcagtgt ctcgggggct
     2101 ctccgtcatc ggttccctgg atttgtggcg acacgaccta ctactggaag cagacttatt
     2161 cttcgcaata cgatgcggtg tatggtgcat acaagacgaa atccgcaaaa aaaatcttct
     2221 ttgtgccgtt tatgacggat gaaaacgggc gaaatgtggg taccaacgag ccgtcagaag
     2281 atccggatgt tgcggatatt gggtattacg gagccggtgg tcgaacggac gccaaaacct
     2341 ggacgacggc cgaccgtaaa acgcattttg gatcatgggc acgtcgtggg attatttccg
     2401 accgtctggc aacggcgatt cttgtgcatg ccgggagaac cgctgaattc attaccggaa
     2461 aacagcctga tacggtgaag cccaccggac cttccggtga aggtacggag agagagccgg
     2521 aagccccggt cagtaaccga accctgatga gtctgctggc gtccggcgaa gacctggcat
     2581 cacagggctg gcgctattat cacaaaccgg cgagcggaga caatgttaac aaaaacattg
     2641 ctgaagcggt ggtcagtgat gcgggggcta cgggaggtaa ggccctgcaa ctgaataaac
     2701 cggaaaacca catctggttt ctggagcatg atgcagccgg acagggagtg gagttactga
     2761 agaagggggg acgtgtgagc gtacagttta agttgccggg ttcactggtg ccgaatcggt
     2821 ttgccctggg catttactgg cagttgtcgt ccctgccgga gggagtgacg ctggcagagg
     2881 aaggcaacga catgctgatg tccttcttcc tgcagacgga tgcgacgaac ctgaacgcga
     2941 tgtaccacaa gaagccgaat gcgaagctgg atacgttcgg ggtctttgat aacggatggc
     3001 acacactgga ttttgagttt gccggaaaca acagcattca ggtgacgccg gtactggatg
     3061 agaaacgggg gacgccgttc acactggtga aatctccggc atcaggggcg gcggacaaac
     3121 tgcaactgac aggcatatca aaggcggcga catatacgct gctgattgcc agtgtgaagg
     3181 tggaagtgaa caacgcggat gccgcggcat gataaaaaaa gccgccagcg gcaggaacgg
     3241 aagctggcgg aggtaatccc aatggagaat gtaaagaaaa gatgctttcg tataccggtt
     3301 ttttaaatga aaacagttct cattgtcaac cataacggta agaaactatg acatttattc
     3361 atcaggtgat gctgtacttc tgtacggcgg tctgtgtgct gtatcttctt tcgggtgggt
     3421 acagggcagt gcgcgatttc tggcgcaggc agattgataa aagggccgca gagaaa
//
LOCUS       DADMHC010000275         3332 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.278, whole genome shotgun sequence.
ACCESSION   DADMHC010000275 DADMHC010000000
VERSION     DADMHC010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3332)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3332)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3332
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.278"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..216)
                     /locus_tag="JNZ57_003896"
     CDS             complement(<1..216)
                     /locus_tag="JNZ57_003896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829919.1"
                     /translation="MKPTTLLLIFTFFAMPGIVYAESPFSSLQSAKEKTTVLQDLRKI
                     CTPQASLSDEAWEKLMLSDENNKQHIRE"
     gene            438..1256
                     /gene="nlpA"
                     /locus_tag="JNZ57_003897"
     CDS             438..1256
                     /gene="nlpA"
                     /locus_tag="JNZ57_003897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein NlpA"
                     /protein_id="HAY8829920.1"
                     /translation="MKLTTHHLRTGAALLLAGILLAGCDQSSSDAKHIKVGVINGAEQ
                     DVAEVAKKVAKEKYGLDVELVGFSGSFLPNDATNHGELDANVFQHRPFLEQDNQAHGY
                     KQVAVGNTFVFPMAGYSKKITTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKE
                     GKGLLHTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDS
                     VFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKAAETIFNGGAVPGW"
     gene            complement(1283..2182)
                     /locus_tag="JNZ57_003898"
     CDS             complement(1283..2182)
                     /locus_tag="JNZ57_003898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005030206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HAY8829921.1"
                     /translation="MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRL
                     IFAGLILLTLSFVHGDKIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATA
                     TVLQFLSPTIIVAWFSLVRKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSLSPAALF
                     WGIASAFAAAFYTTYPSTLIARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLI
                     LAFFYLVVIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDW
                     LGTLLILSSVILISMDSRRRPEK"
     gene            complement(2293..>3332)
                     /locus_tag="JNZ57_003899"
     CDS             complement(2293..>3332)
                     /locus_tag="JNZ57_003899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8829922.1"
                     /translation="IMVGFFFTGSAIMGILVSQFLARHSDKQGDRKLLILLCCLFGVL
                     ACTLFAWNRNYFILLSTGVLLSSFASTANPQMFALAREHADRTGRETVMFSTFLRAQI
                     SLAWVIGPPLAYELTMRFSFKVMYLTAAIAFVVCGLIVWLFLPSIQRNIPVVTQPVEI
                     LPSTHRKRDTRLLFVVCSMMWAANNLYMINMPLFIIDELHLTDKLAGEMIGIAAGLEI
                     PMMLIAGYYMKRIGKRLLMLIAIVSGMCFYASVLMATTPAVELELQILNAIFLGILCG
                     IGMLYFQDLMPEKIGSATTLYANTSRVGWIIAGSVDGIMVEIWSYHALFWLAIGMLGI
                     AMICLLFIKDI"
BASE COUNT          996 a          764 c          772 g          800 t
ORIGIN      
        1 ctcgcgtata tgttgtttat tgttttcatc tgacaacatt aacttttccc acgcttcatc
       61 tgataatgac gcctgtggcg tgcaaatttt acgtaaatct tgtaataccg tggttttctc
      121 ttttgcggac tgcagtgagc taaaaggcga ctcggcgtat acgatgcctg gcatagcgaa
      181 aaaagtgaaa ataagcagta gtgtcgttgg tttcatggat tcaacctttt acaaatgtgt
      241 atcgaatgaa gcataagtgt agtttgcttt catcgctctc atcatgctgt acgaaacgcg
      301 cttgcgtggt cagtaagaag tgccagactt tatattccac ttttattcct ttttattctt
      361 atcgatagcg tttcgttttt taaaccgcag cgaccttacc gctatagtca ggtaatcatt
      421 aataaaagga taaaaaaatg aaactgacaa cacatcatct acggacaggg gccgcattat
      481 tgctggccgg aattctgctg gcaggttgcg accagagtag cagcgatgca aaacacatta
      541 aagttggcgt tataaatggc gcagaacaag atgtcgcgga agtcgctaaa aaggtggcaa
      601 aagagaaata tggcctcgat gttgaactgg taggatttag cggttcgttt ctaccgaacg
      661 atgcgacaaa tcatggcgaa cttgatgcga atgtcttcca gcatcgaccc tttcttgaac
      721 aagataatca ggcgcatggt tataaacagg tagcggtggg aaatacgttt gtcttcccta
      781 tggcgggtta ttccaaaaaa atcacaaccg tggcgcaaat aaaagaaggc gcgacagtgg
      841 cgatccccaa cgacccgacc aaccttggtc gcgcactttt actgttgcaa aaagagaagc
      901 taattactct gaaagaggga aaagggttat tacataccgc gctggatata accgataatc
      961 ctcgtcattt gcagattatg gaactcgagg gggcgcagct tccgcgcgta ctggatgatc
     1021 ccaaagttga tgtagcgatt atcagcacca cttacattca gcagacaggg ctttctccgg
     1081 tgcacgacag cgtatttatt gaagataaga attcgccgta tgtgaatatt ttggtggcac
     1141 gggaagataa taagaatgca gaaaacgtga aggaatttct gcaatcttat caatcacccg
     1201 aagtcgctaa agcggcagaa accattttta acggtggcgc ggtgcctggc tggtaattct
     1261 cactcatgcc gcgccggacg atttattttt ctggccggcg acgggaatcc attgaaatca
     1321 aaatcaccga tgacagaatc agcagcgttc ccagccagtc cggtaatgtg aacgtgatcc
     1381 ccagcaacag caaagagagt agcgcgctac ttaatggttc tgcacagctc aaaatgctgg
     1441 cttttggacc gccaattaat tgtgctcctt tcaggtacag actaaatgtc agggacgtac
     1501 caatgaccac caaataaaaa aacgccagaa tcaaactgcc gttaacgaca aagtttgttc
     1561 cttgtctggc ataaaaaggc aacagaatca gaccgccaat cagcatactc cagccgacga
     1621 ctggtaacgt gccatagcgg gcaattagcg ttgagggata ggtggtatag aatgcagcag
     1681 caaatgccga ggcaatgccc cagaacaacg cggcaggaga gagcgataat gacgtcggat
     1741 taccgtgtgt caccaataaa aaagtcccga ccagcgatgt caaaatagcg cagaaaacca
     1801 gaatgcccgg gcgcgattta cgcaccagtg agaaccaggc gacgataatc gtcggtgaga
     1861 ggaattgcag caccgttgcc gtggctgcgt tcgatttttc gatggttagc aaaaaagtga
     1921 gctgtacagt tagcgcgcca accacggaaa aaatcagcag gctaatggca tctttatgat
     1981 tgttaataat agaaaagatt ttatcgccat gaacaaatga cagcgtcagt agaatcaaac
     2041 cggcgaatat caaacgcgtc atagtcaaaa actgcgacga catctggctt tgctccatga
     2101 tgtattgcgc gcagacccct gaacttcccc acaacacggc ggcaatcaga acgttcagca
     2161 tcccctttct ggtggaaccc atttttccct ctgcatactg ttttgtcgtt tatgtatgca
     2221 ggcatgatag caaaaatggc gaggatggct ctgtttgcgc cacgccgatt tttcttagcc
     2281 cagactggtg agctaaatat ctttaataaa cagcaggcaa atcatcgcaa tacccaacat
     2341 ccctatcgcc agccagaaca acgcatggta gctccagatt tcaaccataa ttccgtcaac
     2401 agagccggcg ataatccagc cgacgcgtga agtatttgca tataacgttg tcgcagagcc
     2461 tattttttca ggcatcaagt cctgaaaata aagcatgccg ataccacaga gaataccaag
     2521 gaagatggca tttagaattt gcaattccag ctcaaccgcc ggagtcgtcg ccatgagtac
     2581 gctggcgtaa aaacacatac cactcacgat agcaatgagc attaatagtc gcttgccaat
     2641 acgtttcatg taatagcctg cgattaacat catcggaatt tccagaccgg cagcgatacc
     2701 aatcatttct ccagccagtt tatcggttag atgcagttca tcaataataa atagcggcat
     2761 atttatcatg tagagattat tcgccgccca catcattgaa cagaccacaa aaagtagccg
     2821 cgtatcccgc ttcctatggg tggagggtaa aatttctacg ggttgggtaa cgacaggaat
     2881 atttctttgt attgatggca aaaacaacca gactatcagc ccgcaaacaa caaatgcgat
     2941 ggcagcggtg agatacatca ctttaaaact aaacctcatt gtcagttcat aagcgagcgg
     3001 tggcccgata acccaggcaa gcgagatctg agcacgtaaa aatgtactga acatgaccgt
     3061 ctcacggcct gttctgtcgg cgtgttcacg ggcgagggcg aacatttgcg ggtttgcggt
     3121 agaagcaaaa ctactcagaa gtacgcccgt agagaggaga atgaagtagt tgcgattcca
     3181 cgcaaaaagc gtgcaggcca gcactccaaa taagcaacat agcagaatca gtaatttacg
     3241 gtcgccttgt ttatcggagt gccttgccag aaattgactg accagaattc ccataatagc
     3301 gctaccggtg aagaaaaaac ctaccattat ag
//
LOCUS       DADMHC010000276         3292 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.279, whole genome shotgun sequence.
ACCESSION   DADMHC010000276 DADMHC010000000
VERSION     DADMHC010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3292)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3292)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3292
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.279"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..77)
                     /locus_tag="JNZ57_003900"
     CDS             complement(<1..77)
                     /locus_tag="JNZ57_003900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HAY8829923.1"
                     /translation="MSKVGINGFGRIGRLVLRRLLEVKS"
     gene            266..796
                     /gene="cybB"
                     /locus_tag="JNZ57_003901"
     CDS             266..796
                     /gene="cybB"
                     /locus_tag="JNZ57_003901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415935.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b561"
                     /protein_id="HAY8829924.1"
                     /translation="MENKYSRLQISIHWLVFLLVIAAYCAMEFRGFFPRSDRPLINMI
                     HVSCGISILVLMVVRLLLRLKYPTPPIIPKPKPMMTGLAHLGHLVIYLLFIALPVIGL
                     VMMYNRGNPWFAFGLTMPYASEANFERVDSLKSWHETLANLGYFVIGLHAAAALAHHY
                     FWKDNTLLRMMPRKRS"
     gene            1041..1214
                     /locus_tag="JNZ57_003902"
     CDS             1041..1214
                     /locus_tag="JNZ57_003902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829925.1"
                     /translation="MKKLALILFMGTLVSFYADAGRKPCSGSKGGISHCTAGGKFVCN
                     DGSISASKKTCTN"
     gene            complement(1286..1435)
                     /gene="hokB"
                     /locus_tag="JNZ57_003903"
     CDS             complement(1286..1435)
                     /gene="hokB"
                     /locus_tag="JNZ57_003903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokB"
                     /protein_id="HAY8829926.1"
                     /translation="MKHNPLVVCLLIICITILTFTLLTRQTLYELRFRDGDKEVAALM
                     ACTSR"
     gene            1834..>3292
                     /gene="trg"
                     /locus_tag="JNZ57_003904"
     CDS             1834..>3292
                     /gene="trg"
                     /locus_tag="JNZ57_003904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein Trg"
                     /protein_id="HAY8829927.1"
                     /translation="MNTTLSQRLGFLHHIRLVPLFACILGGILVLFALSSALAGYFLW
                     QADRDQRDVTAEIEIRTGLANSSDFLRSARINMIQAGAASRIAEMEAMKRNIAQAESE
                     IKQSQQGYRAYQNRPVKTPADEALDTELNQRFQAYITGMQPMLKYAKNGMFEAIINHE
                     SEQIRPLDNAYTDILNKAVKIRSTRANQLAHQRTRLGGMFMIGAFVLALVMTQITFMV
                     LRRIVIRPLQHAAQRIEKIASGDLTMNDESAGRNEIGRLSRHLQQMQHSLGMTVGTVR
                     QGAEEIYRGTSEISAGNADLSSRTEEQAAAIEQTAASMEQLTATVKQNADNAHHASKL
                     AQEASIKASDGGQTVSGVVKTMGAISTSSKKISEITAVINSIAFQTNILALNAAVEAA
                     RAGEQGRGFAVVASEVRTLASRSAQAAKEIEGLISESVRLIDLGSDEVATAGKTMSTI
                     VDAVASVTHIMQEIAAASDEQSRGITQVSQAISEMD"
BASE COUNT          874 a          736 c          827 g          855 t
ORIGIN      
        1 ttgcttttga cttcaagtaa tcgacgcaac accagtcgac cgatacgacc aaaaccgtta
       61 ataccaacct tactcatggt tttctcctgt caggaacgtt cggatgaaaa ttgatccttt
      121 ccaggcttag cccaggattg tgggatgggc aatctccatt cttacagtga aacgtaacgt
      181 actgaaaacg ggtgaacaat atttaatgaa attttgagaa aagcccgtta tgttaacgga
      241 aaattatgtt aaagcaggaa atgttatgga aaataaatac tcaaggttac aaatcagcat
      301 tcactggctg gtctttttgc tggttatcgc agcgtattgc gcaatggagt ttcggggttt
      361 cttcccacgt agcgatcggc cactcatcaa catgattcat gtttcctgcg gcatctcaat
      421 tctcgtgctg atggtcgttc gtcttttgtt aaggctgaaa tacccaaccc cgccgattat
      481 acctaagcca aaaccgatga tgacgggact ggcgcatttg ggacatttgg tgatttatct
      541 cctgtttatt gcgctgccag tgattggttt ggtgatgatg tataaccggg gcaacccgtg
      601 gtttgcgttt ggtttgacga tgccttacgc ttcagaggcc aatttcgaac gggttgatag
      661 cttaaagtcg tggcatgaaa cgctggcgaa tctgggatat tttgtcatcg ggttgcacgc
      721 tgcggctgca ctggcacacc actatttctg gaaggacaac acacttctac gcatgatgcc
      781 gcgtaaacgt tcctgaagga tatttaaaga aaacgcctgt actaaaaccg acccgtggta
      841 caggcgaaga atacgggtct acatcggaag cgcctattat atttatttgt atgacaaata
      901 aaaccataat ccttgcccat acgtccatct ggcttatttt taatcaattc acccgatctt
      961 tgatctcatc tacggtatca aaataaacca gcgtataacg ttcaaatcga acataagatt
     1021 cgataaacca tggaggttat atgaaaaaac tggcacttat tttgtttatg ggaacgcttg
     1081 tttcctttta tgccgatgcc gggcgcaaac cctgttctgg ttcgaaaggg gggatctcac
     1141 actgtacggc aggcggcaaa tttgtctgta atgatggttc tattagtgcc tcgaaaaaaa
     1201 catgcactaa ctgaagtgta aaaggggtgc catgagaaaa tgaatctgct agtcagatgc
     1261 gcggggaaaa tccccgcgct tgcccttacc tggacgtgca ggccatgagc gcagcaacct
     1321 ccttatcacc gtcccggaac cgcagttcgt agagcgtttg tcgggtcagg agtgtgaatg
     1381 tcagaatcgt aatgcagata atgagcagac acaccaccag agggttgtgc ttcatagcct
     1441 ttctccttgc cggatggcgg gtaagaggct aagatctgaa ttgctaggtt cattcgttgg
     1501 cctcggttga tagaaatatc ggtcggggcc ttcgtctttc tgattcccgg ttagcctgaa
     1561 aacagaaagt ctcaggcacc cgcaggcatc ctatgaggtt tccttaggga cgaaaataat
     1621 cacttcacga aattgcgtgc tgttttccag aatttttcgt cattcggatt agccagttta
     1681 gccattcgtt actctcttca ttccaatagc attaattttc tctgcaataa ttgttgtaaa
     1741 aatgtgacgc aaagaggttt ttggtcataa gtaattaccg tcaagtgccg atgactttct
     1801 atcaggagta aacctggacg agagacaacg gtaatgaata caactctctc acagcgatta
     1861 ggttttttgc atcacatcag gctggttccg ttatttgcct gcattcttgg cggtatctta
     1921 gttctattcg cattaagttc tgctctggct ggctatttcc tctggcaggc cgatcgcgat
     1981 cagcgtgatg ttactgcgga gattgagatt cggaccgggt tagcgaacag ttcagatttt
     2041 ttgcgttcag cccggatcaa tatgattcag gccggggctg cgagtcgtat tgcggaaatg
     2101 gaagcaatga agcgaaatat tgcgcaagcc gaatcggaga ttaaacagtc gcagcaaggt
     2161 tatcgtgctt atcagaatcg accggtgaaa acacctgctg atgaagccct cgacactgaa
     2221 ttaaatcaac gctttcaggc ttatatcacg ggtatgcaac ctatgttgaa atatgccaaa
     2281 aatggcatgt ttgaagcgat tatcaatcat gaaagtgagc agatccgacc gctggataat
     2341 gcttataccg atattttgaa caaagccgtt aagatacgta gcaccagagc caaccaactg
     2401 gcccatcagc gcacccgcct gggtgggatg ttcatgattg gcgcgtttgt gcttgccctg
     2461 gtcatgacgc agataacatt tatggtgcta cgtcggatcg tcattcgtcc actgcaacat
     2521 gccgcacaac ggattgaaaa aatcgccagt ggcgatctga cgatgaatga tgaatcggcg
     2581 ggtcgtaatg aaatcggtcg cttaagtcgt catttacagc aaatgcagca ttcactgggg
     2641 atgacagtag ggactgttcg acagggcgcg gaagagattt atcgtggcac cagcgaaatt
     2701 tcagctggca atgcggacct gtcatctcgc accgaagaac aagcggcggc tatcgaacaa
     2761 actgccgcca gcatggagca actcactgcg acggtgaaac agaatgcgga taacgcgcat
     2821 catgccagca aactggcgca agaggcttct attaaagcca gcgatggcgg gcagacggtt
     2881 tccggtgtag taaaaacgat gggcgctatc tccacgagtt cgaagaaaat ttctgagatc
     2941 accgccgtca tcaacagtat tgctttccag acgaatattc tggcactgaa tgctgccgtt
     3001 gaagccgcgc gagcgggtga gcaagggcgt ggatttgccg ttgtcgccag cgaagtacgg
     3061 acactcgcaa gtcgcagcgc tcaggcggcg aaagagattg aaggcttgat cagtgaatca
     3121 gtcaggttaa ttgacctggg gtcggatgag gtggcaacgg ccgggaaaac catgagcact
     3181 attgttgatg ccgtcgcgag tgtcacacat atcatgcagg aaatcgccgc cgcctcggat
     3241 gaacaaagta gaggcataac gcaggttagc caggcgattt ctgaaatgga ta
//
LOCUS       DADMHC010000277         3199 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.280, whole genome shotgun sequence.
ACCESSION   DADMHC010000277 DADMHC010000000
VERSION     DADMHC010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3199)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3199)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3199
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.280"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            81..281
                     /locus_tag="JNZ57_003905"
     CDS             81..281
                     /locus_tag="JNZ57_003905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000553975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829928.1"
                     /translation="MHQKTAEHEQTRILLTIKNGKVIFIRHVHDDELVGTLSTFLFIA
                     EKAGYDVIAPADEDEDEDEDEE"
     gene            287..868
                     /locus_tag="JNZ57_003906"
     CDS             287..868
                     /locus_tag="JNZ57_003906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001199102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829929.1"
                     /translation="MQYDEFQAEATANGIRTGSMTIDYHDAIRRLDAGEFDTPNVRGL
                     RILQCLAQADEAGLLGKLPVEMKVAQWRWLYVTTFINEEEDKNGTIDILNEHGTTEHA
                     VVYNGMYGFMTIYPGPIRFALQQYIEWNLIQKYGEAEGMGRALFLYQKMLTTSPDKGF
                     ILSDMGREGLEILLDEIINEMNTHGMQSETDIK"
     gene            1117..1434
                     /locus_tag="JNZ57_003907"
     CDS             1117..1434
                     /locus_tag="JNZ57_003907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000179800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4752 family protein"
                     /protein_id="HAY8829930.1"
                     /translation="MATDSQLTIETALNVGLALLGYFYIVFCSGRWLSLLFLKKWNKR
                     RKQDERQKAMNAFSEAFGIDGMEPGDPARAISRGGVVILVYRSEEKNDDHKTTSRKNH
                     ISP"
     gene            1388..1702
                     /locus_tag="JNZ57_003908"
     CDS             1388..1702
                     /locus_tag="JNZ57_003908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829931.1"
                     /translation="MTITKQRVEKIIYRHEMGLNSDVTAEEVYDLAVLALNLSNIANL
                     KRYELDMDGCDSCGQDCGADMTEDPDGDYVLFDDVVKLFEFDTTTQKLEIPAKEAASE
                     QD"
     gene            1689..2369
                     /locus_tag="JNZ57_003909"
     CDS             1689..2369
                     /locus_tag="JNZ57_003909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ead/Ea22-like family protein"
                     /protein_id="HAY8829932.1"
                     /translation="MSKIDYQALREAAEQATQDEWVAYILPGHNGIYPARTSEGRHCG
                     YFIDWPGVCQGRESISIRTYAVNCNDAWLNTEGDDISGSYVKYKDHQEVVAALEAKCA
                     ALAAENAGIKSAIPESRDIEDDNDNMDDVSLAEDFGFNHAIERMRRQIPETPTTDAFL
                     AEVRAQGVDAAIEAAKNLVAQEYECKDFKAAQSDCCMHPSSDLVGKVEMTEWLVDFAA
                     QLRKGGNQ"
     gene            2366..2902
                     /locus_tag="JNZ57_003910"
     CDS             2366..2902
                     /locus_tag="JNZ57_003910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001289976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ead/Ea22-like family protein"
                     /protein_id="HAY8829933.1"
                     /translation="MSEINYQALREVAERAIPAMERLLMLPVDDDLLSEQELKDYGVD
                     IDALNAFKFLTGPETVLALLDERERNQQYIKRRDQENEDIALTVGKLRVELEAAKSKL
                     NEQREYYEGVISDGCKRIAELEAREVQLPTRYDLRYGHPINAYERQVMIPKENGSWLY
                     LIDLEHALRVADIRIKGE"
     gene            2904..>3199
                     /locus_tag="JNZ57_003911"
     CDS             2904..>3199
                     /locus_tag="JNZ57_003911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001696189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829934.1"
                     /translation="MALTHHELCQIAYKFLKRNGFKVCFHDRFVAVTSTGEQPDAMGF
                     RNSASCLIEAKCSRADLLADRKKRFRKNPSLGMGDWRFFISEPEIISVEDLPPG"
BASE COUNT          964 a          640 c          829 g          766 t
ORIGIN      
        1 gcctgcctta ttgcacaata cggtgaaaat tacatgcata ttgcctgctt atttctgcgt
       61 aaagcatacg ggagataata atgcatcaga aaacagcaga acacgaacaa accagaatat
      121 tgctgaccat caaaaacggg aaagtaatat tcattcgcca tgttcatgac gatgaacttg
      181 taggaactct ttcaacattc ctgtttattg cagaaaaggc aggatatgac gttattgcac
      241 cagcagatga agatgaagat gaagatgaag atgaggaata aatatcatgc aatacgatga
      301 attccaggct gaagcaacag ccaatggtat acgaactggc agtatgacga ttgattatca
      361 cgacgccata cgtcgtctgg atgccggaga attcgatact cctaatgtgc gaggtttacg
      421 tatccttcag tgtctggcgc aagccgacga agcaggatta ctgggtaaac ttccggttga
      481 gatgaaggtt gctcagtggc gatggttgta tgtgacgaca ttcatcaacg aagaagaaga
      541 caagaacggc acaattgata tcctgaatga acacggaaca actgaacacg ccgtggtata
      601 taacgggatg tatgggttta tgacgatata tcccggcccc attcgatttg ccttacaaca
      661 gtatattgaa tggaatttaa ttcaaaaata cggcgaagct gaaggaatgg gaagagcgct
      721 gtttctttat cagaaaatgc tcactacttc ccctgataaa ggtttcattc tttcagatat
      781 gggtcgagaa gggcttgaaa tccttctgga tgaaattatt aacgaaatga atactcatgg
      841 catgcaatcc gaaacagata ttaagtaaaa gggaccacat gaccgttatc gagtatatcc
      901 aggaaaatcc agattgcagt agagaagata tatccctcgc acttggaaga agcgcaactt
      961 ctatcagtaa taaattatca cggttattgt ggaatgggtt aatagtacga actggagaaa
     1021 aaaacaaaat gattctgtac tgcgtaaaca atctgccgtt tggatacagc aatcccctaa
     1081 gtgttatgtt caaccagtta cttaaacagg taagaaatgg caactgactc acaactaacc
     1141 atagaaacgg ccctgaatgt cggcctggcg ctccttggtt atttttacat cgtgttctgc
     1201 agcggacggt ggctgtcgct gttgttcctg aaaaaatgga ataaacgccg taagcaggat
     1261 gaacgccaga aggcaatgaa tgcgttttcc gaagccttcg gaattgacgg catggaacca
     1321 ggggatccag ctcgcgcaat cagcagaggg ggtgtagtaa tccttgtata tcggagtgaa
     1381 gagaaaaatg acgatcacaa aacaacgagt agaaaaaatc atatatcgcc atgaaatggg
     1441 actgaacagc gatgtcactg ccgaagaggt ttatgacctg gctgtactgg cgctgaattt
     1501 atcaaatatc gcaaacctga agcgatacga gcttgatatg gatggttgcg actcgtgcgg
     1561 tcaggattgt ggcgcagata tgactgaaga tcctgatggt gattatgtcc tgtttgatga
     1621 cgtggttaag ttgtttgaat ttgatacaac cactcaaaag ttagaaatcc cggcaaagga
     1681 ggctgccagt gagcaagatt gactatcagg cactgcgcga ggcggcggaa caggcaacgc
     1741 aagatgaatg ggtagcatat attttgccgg gtcataacgg catttatcct gcgcgcacgt
     1801 ctgagggtag gcattgcgga tactttattg actggcctgg cgtctgtcag gggcgggaga
     1861 gcatcagcat cagaacctac gcagtgaatt gcaatgacgc atggctaaac accgaaggtg
     1921 atgacatctc cggctcatac gttaagtaca aagaccatca ggaagtggtt gccgctcttg
     1981 aagccaagtg cgcggcgctg gcagcggaga atgcgggaat aaagtctgca attccagaat
     2041 cacgggatat tgaggatgac aatgacaata tggatgacgt atctctcgcg gaagacttcg
     2101 ggttcaatca tgcaatagaa cggatgagga gacagatacc tgaaacgcca accactgatg
     2161 ctttcctggc tgaagtccgg gcgcaggggg tggatgctgc tatagaagct gcaaaaaatc
     2221 tggtggccca agaatatgag tgtaaggatt tcaaagcggc gcagagtgat tgctgtatgc
     2281 accctagttc agacctggta gggaaggttg aaatgactga gtggttagtt gactttgctg
     2341 cccagcttcg caaaggaggc aatcagtgag cgaaattaat taccaggcac tgcgtgaggt
     2401 ggcggaacgt gcaattccag caatggaacg cctgttaatg ttgccagttg atgatgattt
     2461 gttaagtgaa caggaactta aagattacgg tgtggatatt gatgcgctca atgccttcaa
     2521 atttctgacc ggaccagaaa ccgtgctggc actactggat gaacgggaaa gaaaccagca
     2581 atacatcaaa cgccgcgacc aggagaacga ggatattgcg cttacggttg ggaagctgcg
     2641 cgttgagctt gaagcagcaa aatcaaaact caacgagcag cgcgagtatt acgagggagt
     2701 tatctctgat gggtgcaagc gtattgctga actggaagcg cgggaagttc aattaccgac
     2761 tcgctacgac cttcgatatg gacacccgat aaatgcatat gagcgacaag tcatgatacc
     2821 taaagaaaat ggcagttggc tttacctgat tgacctagaa cacgcattac gcgtcgctga
     2881 cattcgcatc aaaggagagt gatatggcgt taacacacca cgaactctgt cagattgcgt
     2941 acaagttcct taagcgcaac gggttcaagg tttgctttca tgaccgcttt gttgctgtaa
     3001 ccagtaccgg agaacagcca gatgctatgg gattcagaaa ttcagcatca tgcctgatag
     3061 aggcgaagtg ttctcgtgct gacttgttgg cagatagaaa aaagcgtttc cgtaaaaatc
     3121 cctcacttgg catgggcgac tggcgattct ttattagtga gccggaaatt atttcagttg
     3181 aggatttacc tcccggctg
//
LOCUS       DADMHC010000278         3181 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.281, whole genome shotgun sequence.
ACCESSION   DADMHC010000278 DADMHC010000000
VERSION     DADMHC010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3181)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3181)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3181
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.281"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            354..513
                     /locus_tag="JNZ57_003912"
                     /pseudo
     CDS             354..513
                     /locus_tag="JNZ57_003912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001066419.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(731..2821)
                     /gene="iha"
                     /locus_tag="JNZ57_003913"
     CDS             complement(731..2821)
                     /gene="iha"
                     /locus_tag="JNZ57_003913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional siderophore receptor/adhesin Iha"
                     /protein_id="HAY8829935.1"
                     /translation="MRITTLASVVIPCLGFSASSIATAEDVMIVSASGYEKKLTNAAA
                     SVSVISQEELQSSQYHDLAEALRSVEGVDVESGTGKTGGLEISIRGMPASYTLILIDG
                     VRQGGSSDVTPNGFSAMNTGFMPPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKN
                     ADKWLSSVNAGLNLQESNKWGNSSQFNFWSSGPLVDDSVSLQVRGSTQQRQGSSVTSL
                     SDTAATRIPYPTESQNYNLGARLDWKASEQDVLWFDMDTTRQRYDNRDGQLGSLTGGY
                     DRTLRYERNKISAGYDHTFTFGTWKSYLNWNETENKGRELVRSVLKRDKWGLAGQPRE
                     LKESNLILNSLLLTPLGESHLVTVGGEFQSSSMKDGVVLASTGETFRQKSWSVFAEDE
                     WHLTDALALTAGSRYEHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQLH
                     KGISGVSGQGKTNLLGNPDLKPEESVSYEAGVYYDNPAGLNANVTGFMTDFSNKIVSY
                     SINDNTNSYVNSGKARLHGVEFAGTLPLWSEDVTLSLNYTWTRSEQRDGDNKGAPLSY
                     TPEHMVNAKLNWQITEEVASWLGARYRGKTPRFTQNYSSLSAVQKKVYDEKGEYLKAW
                     TVVDAGLSWKMTDALTLNAAVNNLLNKDYSDVSLYSAGKSTLYAGDYFQTGSSTTGYV
                     IPERNYWMSLNYQF"
BASE COUNT          797 a          837 c          732 g          815 t
ORIGIN      
        1 agttgatctg acctctcagt aaatatcaat acggttctgg cgagccgctt acgtgcagca
       61 gtcttatccg gcagtttaaa ggggaggacg gagaccaatg aggcactgga gcagattcag
      121 tgcagaggtg acctgcttta tcaaacttaa ttgtgacaaa atggcgattg agaaggtgca
      181 attgacttat ccggattcgg tcgtggcgag gtggtgcccc tgcattctgc taaccgggtt
      241 atgagccagg agtcagcgat agacaaaggg acttatctga ccgggccccc ggaaaaatgg
      301 cgggagagaa tgataccttc ctgctgacga gaccggactt tgagatgacg agcgatagtg
      361 cggcagtgat gtacagcctg atcggtagct gcaaaactta acggaatcga gccggaaacg
      421 tggctacgcc acgtgatcag tgtaatcaac acctggcctg ccaaccgcat gaaagagttg
      481 ttgccctgga acgtcactct ctctgtaaac taatttttac cccacgtcct tcacggtgcg
      541 cttacactct ggacaagtat gtaaatgata agttaaaaat aatccgtgca tttcctgtga
      601 cgatattagt tgttggtaac gaaatctcat tagcggatcg gaaatgcact taacctaata
      661 cgttgccact gttccgccag gagttgcagt ggcaacgtat tctaccgtca gtgatagcgt
      721 tttgttatta tcagaactga tagttcagcg acatccagta atttcgctca ggtatcacat
      781 atcctgttgt tgatgatccc gtctggaagt aatcaccggc atacagcgta ctcttaccgg
      841 cactgtacag gctcacgtca ctgtaatcct tgttgagcag gttattcacc gcagcattca
      901 gcgtcagggc atccgtcatc ttccacgaca gacctgcatc caccaccgtc caggctttca
      961 ggtattctcc tttctcatca tacactttct tctgtacagc gctcagtgac gaataattct
     1021 gggtgaaacg tggtgttttc ccgcgataac gggcacccag ccatgatgcc acctcttcgg
     1081 tgatctgcca gttcagtttc gcattcacca tgtgttcagg ggtataactc agcggcgcac
     1141 ctttgttatc accatcacgt tgttcacttc gggtccaggt gtaattcagt gacagcgtga
     1201 catcctctga ccacagcggc aatgtgccgg caaattccac accgtgcaac cgggcctttc
     1261 cgctgtttac atagctattg gtgttatcat ttatggaata agagacaatc ttgttggaga
     1321 agtcagtcat aaaacctgtg acattggcat tcagaccggc ggggttatcg taatacaccc
     1381 cagcctcata actgacgctc tcttccggct tcaggtcggg gttaccaagt agatttgttt
     1441 ttccctgccc ggacacacca ctaatccctt tatgtagctg ccccattctg ggtgccttat
     1501 atcccgtggt cacaccgcct ttcagcgtcc aggcatctgc cacatcccag accagatatg
     1561 cacgcggact gaagtgtccc ccgaattgct catgatgttc atagcggctg cccgcagtca
     1621 gcgcaagtgc atccgtgaga tgccactcat cctcagcaaa taccgaccag cttttctgcc
     1681 ggaaagtttc acctgtgctg gcaaggacaa ctccgtcttt catggacgag ctctgaaact
     1741 cgccccccac cgtaaccaga tgagattctc ccagaggggt aagcagtaat gaattcagga
     1801 taaggttcga ttccttaagc tcccgcggct gaccggcaag cccccatttg tcgcgcttca
     1861 gtacactgcg tacgagctca cgacctttat tttctgtctc gttccagttc agatacgatt
     1921 tccatgttcc gaaggtgaaa gtatgatcat agccagctga aattttgttc cgctcatagc
     1981 gcagggtccg gtcatatccc cccgtcagac tccccagttg cccatcccgg ttatcataac
     2041 gctgccgggt ggtatccata tcaaaccaga gcacatcctg ctccgacgcc ttccagtcaa
     2101 gacgtgcacc aagattataa ttctgtgact ccgtgggata aggaatacgc gtggctgctg
     2161 tatcgctcag tgatgtgacc gatgagccct gacgctgttg tgtgctaccg cgtacctgca
     2221 ggctgacaga atcatccaca agggggccac tgctccagaa attaaactgg ctgctgttac
     2281 cccatttgtt gctttcctgc agattcagcc ctgcattgac ggaagagagc catttgtctg
     2341 cattctttct ggtaatgata ttcaccacac cgcccatcgc atcagagcca tacagtgtgg
     2401 acatcggccc cctgataacc tcaatacgct caatggcggc cagagggggc atgaacccgg
     2461 tattcatggc agaaaaaccg ttgggagtca cgtcactgct tccgccctga cgaacaccat
     2521 caatcagtat cagcgtgtaa ctggctggca ttcctcggat gctgatttcc agcccaccgg
     2581 ttttacccgt accactttca acatccacac cctctactga tctcagagcc tccgccagat
     2641 cgtggtactg gctggactgc aattcctcct ggctaatcac agaaacactg gcggctgcgt
     2701 tagtcagctt tttctcatag ccggatgccg agacaatcat cacatcctct gcagtagcta
     2761 tgctgctggc tgaaaatccg agacagggaa tgactacgga agccagagtg gttattcgca
     2821 tattactaat ctccgatcat gttaaccggc aagacaatac acaaatacaa acaataatga
     2881 gaataattta tatttgcctt tttacaaaaa ataaagatta ttaacaaaac taaatataaa
     2941 taacaactgc ctcggcatgc cagttaacag ctatccgtat ggcttgttcg gttttgcgaa
     3001 taaaaaatgg ttactgtaga agcggatttc caccacatgt caaccatgaa tggtcagtgg
     3061 tgcgagacga ctgggatgat ttggtcgatg acttcttccg gtgaatactg atagaaacat
     3121 tgaaatattg taagagaaag cgttcaaaat tctgtggcac gtgaaaaatt ctacagcgtc
     3181 a
//
LOCUS       DADMHC010000279         3146 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.282, whole genome shotgun sequence.
ACCESSION   DADMHC010000279 DADMHC010000000
VERSION     DADMHC010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3146)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3146)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3146
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.282"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(233..991)
                     /locus_tag="JNZ57_003914"
     CDS             complement(233..991)
                     /locus_tag="JNZ57_003914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HAY8829936.1"
                     /translation="MSQILLQPANAMITLENVHKWYGQFHVLKNINLTVQPGERIVLC
                     GPSGSGKSTTIRCINHLEEHQQGRIVVDGIELNEDIRNIERIRQEVGMVFQHFNLFPH
                     LTVLQNCTLAPIWVRKMPKKEAEALAMHYLERVRIAEHAHKFPGQISGGQQQRVAIAR
                     SLCMKPKIMLFDEPTSALDPEMVKEVLDTMIGLAQSGMTMLCVTHEMGFARTVADRVI
                     FMDRGEIVEQAAPDEFFTHPKSERTRAFLSQVIH"
     gene            complement(999..2102)
                     /locus_tag="JNZ57_003915"
     CDS             complement(999..2102)
                     /locus_tag="JNZ57_003915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709065.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HAY8829937.1"
                     /translation="MTKVLLSQPSRPASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWL
                     MWELIPPLLNWAFLQANWVGSTRADCTKAGACWVFIHERFGQFMYGLYPHDQRWRINL
                     ALLIGLVSIAPMFWKILPHRGRYIAVWAVIYPLIVWWLMYGGFFGLERVETRQWGGLT
                     LTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVML
                     PLFMAEGTSIDKLIRVLVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ
                     GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEG
                     YVFAALIYWIFCFSMSRYSQHLEKRFNAGRTPH"
     gene            complement(2112..2809)
                     /locus_tag="JNZ57_003916"
                     /pseudo
     CDS             complement(2112..2809)
                     /locus_tag="JNZ57_003916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001272090.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
     gene            complement(2806..>3146)
                     /locus_tag="JNZ57_003917"
     CDS             complement(2806..>3146)
                     /locus_tag="JNZ57_003917"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HAY8829938.1"
                     /translation="LSNRGITSGFAFLDRGAGFGIVQHLSDYQQGDTYGRVFIVGLLN
                     TLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWYFAVL
                     RNLPGPRARL"
BASE COUNT          889 a          827 c          751 g          679 t
ORIGIN      
        1 catcaaataa aacaaaaggc tcagtcggaa gactgggcct tttgttttat ctgttgtttg
       61 tcggtgaaca ctctctcgag taggacaaat ccgccgggag cggatttgaa cgttgcgaag
      121 caacggcccg gagggtggcg ggcaggacgc ccgccataaa ctgccagaca tcaaatcaag
      181 caaaaaggcc atccgaaagg atggcctttt tgcttttcga actaacattc aattaatgga
      241 ttacctgcga taaaaatgcc ctcgtacgct ctgatttagg atgcgtaaaa aattcatcag
      301 gtgcagcttg ttccactatc tccccacgat ccataaaaat tacccggtca gcgacggtac
      361 gtgcaaaccc catctcatgt gttacacaca acattgtcat acccgactgc gccagcccaa
      421 tcatcgtatc cagcacctct ttcaccatct ccggatcgag cgccgacgtt ggttcatcaa
      481 acaacataat tttcggcttc atacacagcg aacgcgcaat ggcaacgcgt tgctgctgac
      541 cacctgaaat ctgtccggga aacttatgcg catgttcggc aattctcacc cgctcaaggt
      601 aatgcatcgc cagagcttca gcctctttct taggcatctt gcgtacccaa atcggtgcca
      661 gggtacagtt ctgtaaaacg gtcagatgag ggaagagatt gaaatgctga aataccattc
      721 ccacttcctg cctgatgcgc tcaatattgc ggatatcttc attaagttcg atgccatcta
      781 cgacaatccg tccctgttga tgttcttcca gatgattaat acaacgaatg gttgtcgatt
      841 taccggaacc agaagggcca cacagaacga tccgttctcc cggttgcacg gttaaattta
      901 tatttttcaa aacatggaat tgtccatacc atttatggac gttttccagc gtaatcatcg
      961 cgttagcagg ttgcagtaaa atttggctca tagtgtcctc aatgcggtgt acgcccggcg
     1021 ttaaaacgtt tttccagatg ttggctataa cgtgacatgc tgaaacaaaa gatccagtag
     1081 atcagcgcgg cgaaaacata cccttccgtc gacataccca accaggcggg atcaacggtt
     1141 gcctgctgaa cgctactgaa aagatcgaac aagccgatga tgatcaccag gctggtatct
     1201 ttgaagagtg cgatgatggt atttaccagc ccaggaatta ccagcttcaa cgcctgtggc
     1261 agaataacca gcccctgagt tttccagtac cccaacgcca gcgactctgc cgcttcatat
     1321 tgccctttag gtagggcctg taatccgcct cgcacgactt ccgcaacata tgctgactga
     1381 aacaggatca cgccaaccag cacgcggatc agtttgtcga tactggtgcc ttctgccata
     1441 aacaacggca gcatgaccga agacataaac aatacggtaa tcagcggtac gccgcgccag
     1501 aactcgataa aaatgaccga taagatacgc acaatcggca tatgggagcg gcgacctaac
     1561 gccagtaaga tcccccacgg tagcgccccc gcaatcccaa cggatgcaat aattaaagtt
     1621 agcgtcagcc cgccccattg ccgggtttca acccgctcaa gaccaaaaaa accgccatac
     1681 atcagccacc agacaatcag tgggtaaatc accgcccaga ccgcaatata gcgaccgcga
     1741 tgcgggagta ttttccagaa cattggtgcg attgacacaa ggccaatcag taatgccagg
     1801 ttaattcgcc agcgttggtc gtgtgggtaa agtccataca taaactgacc aaatcgttcg
     1861 tggatgaaga cccaacaggc accggctttt gtgcagtcgg cacgcgttga gccaacccag
     1921 ttagcctgca aaaatgccca gttcagcaac ggtgggatca gttcccacat caaccatatg
     1981 cagccaatag tcagcaggct attgctccag ctggagaaca gattttttcg cacccacacc
     2041 atcgcgcggc ttgagttatg gctcgctggg cgcgagggct gagacagcaa tacttttgtc
     2101 atcatgactc cttagcgttc aacgatcgcg atgcggcggt tatagatatt catcagcagc
     2161 gagatagtca ggctgataat cagatagacc gacatggtca tggctatcgt ctcgatggct
     2221 tgccccgtct ggttcagcac ggtgccagca aacagcgaaa ccatatcggg atagccaata
     2281 gcggcggcaa gagaggagtt tttgacgatg ttgagatact ggctggttaa cggcggaata
     2341 atcactcgca gtgcctgggg aataatgacc tggcgtagcg taaccccagt gaccgagccg
     2401 cttcatgttg accataaggc actgcctgga tcccagcgcg gataatctcg gcgataaatg
     2461 cagaggtata aaccgaaagt gccagcgtta aggctgccag ttcaggaatt aaaaccattc
     2521 cgccgcggaa gttaaagcct cgtagggctg ggacatccca gtgtagtgct gcgccaaaaa
     2581 gccattgcgc cagtaaaggc aaaccgatga tcaacactgc ggcgaacggc caggtgcggc
     2641 gcagttgtcc ggtctttatc tggtatgttt tattaaagcg gaatagccca acagaaagga
     2701 ctatagccat aacaacagcc aggataaacg caataaatcc gtctcccagc tgcggtgacg
     2761 gaatataaag cccacgattg ctcaaaaagg ccagatcaaa cgcgctcaca gcctggcgcg
     2821 tggtccgggc aaattgcgca acacggcaaa gtaccagaag aagatttgca gcagcggggg
     2881 aatattacgg aagatctcaa tataaattgt ggatagcttt cgtagcagcc agttatccga
     2941 aagtctcgcc agaccgataa agaagcctaa aacagaagcg aacacaatac acaatgcaga
     3001 aaccagtagc gtattgagta agccgacaat aaaaacgcgt ccgtaggtgt cgccctgctg
     3061 gtaatcgctc aaatgctgga caataccgaa gccagcgccg cgatccagaa aggcaaaacc
     3121 tgaagtaatg ccacgattac tgagat
//
LOCUS       DADMHC010000280         3128 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.283, whole genome shotgun sequence.
ACCESSION   DADMHC010000280 DADMHC010000000
VERSION     DADMHC010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3128)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3128)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3128
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.283"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..1022)
                     /gene="ccp"
                     /locus_tag="JNZ57_003918"
     CDS             complement(<1..1022)
                     /gene="ccp"
                     /locus_tag="JNZ57_003918"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HAY8829939.1"
                     /translation="MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAV
                     SENNKVLGFLREKGCDYCHTPSAELPAYYYIPGAKQLMDYDIKLGYKSFNLEAVRAAL
                     LADKPVSQSDLNKIEWVMQYETMPPTRYTALHWAGKVSDEERAEILAWIAKQRAEYYA
                     SNDTAPEHRNEPVQPIPQKLPTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGV
                     DGRKTSIGVGGAVGPINAPTVFNSVFNVEQFWDGRAATLQDQAGGPPLNPIEMASKSW
                     DEIIAKLEKDPQLKAQFLEVYPQGFSGENITDAIAEFEKTLITPDSPFDKWLRGDENA
                     LTAQQK"
     gene            1422..3071
                     /gene="treF"
                     /locus_tag="JNZ57_003919"
     CDS             1422..3071
                     /gene="treF"
                     /locus_tag="JNZ57_003919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalase TreF"
                     /protein_id="HAY8829940.1"
                     /translation="MLNQKIQNPNPDELMIEVDLCYELDPYELKLDEMIEAEPEPEMI
                     EGLPASDALTPADRYLELFEHVQSAKIFPDSKTFPDCAPKMDPLDILIRYRKVRRHRD
                     FDLRKFVENHFWLPEVYSSEYVSDPQNSLKEHIDQLWPVLTREPQDHIPWSSLLALPQ
                     SYIVPGGRFSETYYWDSYFTMLGLAESGREDLLKCMADNFAWMIENYGHIPNGNRTYY
                     LSRSQPPVFALMVELFEEDGVRGARRYLDHLKMEYAFWMDGAESLIPNQAYRHVVRMP
                     DGSLLNRYWDDRDTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRD
                     TGRLASIRTTQFIPIDLNAFLFKLESAIANISALKGEKETEALFRQKASARRDAVNRY
                     LWDDENGIYRDYDWRREQLALFSAAAIVPLYVGMANHEQADRLANAVRSRLLTPGGIL
                     ASEYETGEQWDKPNGWAPLQWMAIQGFKMYGDDLLGDEIARSWLKTVNQFYLEQHKLI
                     EKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP"
BASE COUNT          781 a          801 c          771 g          775 t
ORIGIN      
        1 tttttctgtt gcgccgtcag cgcattttca tctccacgca accatttatc aaatggggaa
       61 tccggcgtaa ttaatgtttt ctcaaattca gcaatggcat cagtaatatt ttcgccactg
      121 aaaccttgcg gataaacttc gaggaactgc gctttaagct gcggatcttt ttccagctta
      181 gcaataattt cgtcccagga tttcgacgcc atttcaatcg ggttcaacgg cggtccacct
      241 gcctgatcct gcaatgttgc cgcacgacca tcccagaact gctcaacgtt aaatactgag
      301 ttaaataccg tcggcgcgtt aatcggccca actgcgccac caacaccaat cgatgttttt
      361 ctgccatcga cgccccccgc attcaacgca tggcaatgag cgcatgaaat ggtgctatca
      421 gccgataaac ggggatcgtg atacagcgca aagcccaacg ccactttttg cgcatcggta
      481 ggcagttttt gcgggatggg ctgcaccggt tcattgcgat gctccggagc agtatcattg
      541 ctggcgtaat attccgcgcg ctgttttgca atccaggcca gtatttccgc ccgctcttca
      601 tcactcacct tacccgccca gtgtagcgcg gtataacgcg ttggtggcat agtttcatac
      661 tgcatcaccc attcaatctt attcagatcg ctttgcgaaa cgggtttatc agccagcagt
      721 gccgcacgca cggcctcgag gttaaaagat ttatatccaa gcttaatgtc gtaatccatc
      781 aactgtttcg cgccaggaat ataataatag gcgggtaatt ctgccgaagg cgtgtggcaa
      841 tagtcgcatc ctttttcgcg gagaaagcct aaaaccttat tattttcact gacagcagat
      901 gcctgaacat cggcctgttt actgcgttta ttatcgtggt accacacata accagataac
      961 cctaaatagc aaatcgcgac gccagccagg ccgatcgcgg taatacgtga gaccattttc
     1021 attattcttc cctcacggtg gtgagttatt gtgacccaga aaattttcca gaatgctgca
     1081 aacgtctctg cgagacaaag ccatcataaa aaacagggag atacgctttt tgataggaat
     1141 caattacatg aatataaact atcaataaga tagcctgtgc ctattaccca gatcaggaat
     1201 ggcatatcat gattgcggcg agagcaggat tgaatgttct gaaaatgaaa aacaacacca
     1261 aatccgtatt tttataaatt ccattgatat tagtgcgtta tattttttga caagttaata
     1321 aacgtgatcc accgcacgct ttgtagccca ccaggcggag cgaatgacta cccttaaaga
     1381 aaagccgata attagcgacg aatttcggag gttggatcct tatgctcaat cagaaaattc
     1441 aaaaccctaa tccagacgaa ctgatgatcg aagtcgatct ctgctatgaa ctggacccgt
     1501 atgaattaaa actggatgag atgatcgagg cagaaccgga acccgagatg attgaagggc
     1561 tgcccgcctc tgatgcgctg acgcctgccg atcgctatct cgaactgttc gagcatgttc
     1621 agtcggcgaa aattttcccc gacagtaaaa cctttcccga ctgcgcaccc aaaatggacc
     1681 cgctggatat tttaatccgc taccgtaaag tgcgccgtca tcgtgatttt gacttgcgca
     1741 agtttgttga aaatcacttc tggctgccgg aggtctactc cagcgagtat gtatcggacc
     1801 cgcaaaattc cctgaaagag catatcgacc agctgtggcc ggtgctaacc cgcgaaccac
     1861 aggatcacat tccgtggtct tctctgctgg cgctaccgca gtcatatatt gtcccgggcg
     1921 gccgttttag cgaaacctac tattgggatt cctatttcac catgctgggg ctggcggaaa
     1981 gtggtcggga agatttgctg aaatgcatgg ccgataactt cgcctggatg atcgaaaact
     2041 acggtcacat ccccaacggc aaccgcacct attatttgag ccgctcgcaa ccaccggttt
     2101 ttgcgctgat ggtggagttg tttgaagaag atggtgtacg cggtgcgcgc cgctatctcg
     2161 accacctgaa aatggaatat gccttctgga tggacggtgc agaatcgttg atccctaatc
     2221 aggcctatcg ccatgttgtg cggatgccgg acggatcgct gctcaaccgt tactgggacg
     2281 atcgcgacac gccgcgtgac gaatcctggc ttgaggacgt tgaaaccgcg aaacattctg
     2341 gtcgcccgcc caacgaggtg taccgcgatt tacgagcggg ggcggcctcc ggttgggatt
     2401 actcttcccg ttggctgcgt gatactggtc gtctggcgag tattcgtacc acccagttca
     2461 tccccatcga tctgaatgcc ttcctgttta aactggagag cgccatcgcc aacatctcgg
     2521 cgctgaaagg cgagaaagag acagaagcac tgttccgcca gaaggccagt gcccgtcgcg
     2581 atgcggtaaa ccgttacctc tgggatgatg aaaacggcat ctaccgcgat tacgactggc
     2641 gacgcgaaca actggcgctg ttttccgctg ccgccattgt gccactctat gtcggtatgg
     2701 cgaaccatga acaggccgat cgtctggcaa atgccgtgcg cagtcggtta ctgacacctg
     2761 gcgggattct ggcaagcgag tacgaaaccg gtgaacagtg ggataaaccc aacggctggg
     2821 caccgttaca atggatggcg attcagggat ttaaaatgta cggcgatgac cttctgggtg
     2881 atgaaatcgc gcgaagctgg ctgaagacgg tgaatcagtt ctatctggaa cagcacaaac
     2941 tgatcgaaaa ataccatatt gccgatggtg ttccacgcga aggcggcggt ggcgagtatc
     3001 cgttgcagga tgggtttggc tggactaacg gtgtggtacg ccgtttaatt ggtttgtacg
     3061 gcgaaccata atatttttac agccagccgc taacttcctg ctggctgtaa aattatcctc
     3121 ttcaggag
//
LOCUS       DADMHC010000281         3103 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.284, whole genome shotgun sequence.
ACCESSION   DADMHC010000281 DADMHC010000000
VERSION     DADMHC010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3103)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3103)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3103
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.284"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..190)
                     /locus_tag="JNZ57_003920"
     CDS             complement(<1..190)
                     /locus_tag="JNZ57_003920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF898 family protein"
                     /protein_id="HAY8829941.1"
                     /translation="MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLP
                     WALMKCKRYLYANMEVNGQ"
     gene            383..885
                     /locus_tag="JNZ57_003921"
                     /pseudo
     CDS             383..885
                     /locus_tag="JNZ57_003921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026287.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            complement(931..1347)
                     /gene="rraB"
                     /locus_tag="JNZ57_003922"
     CDS             complement(931..1347)
                     /gene="rraB"
                     /locus_tag="JNZ57_003922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HAY8829942.1"
                     /translation="MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLE
                     TLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAE
                     KFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH"
     gene            1509..2513
                     /gene="argF"
                     /locus_tag="JNZ57_003923"
     CDS             1509..2513
                     /gene="argF"
                     /locus_tag="JNZ57_003923"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HAY8829943.1"
                     /translation="MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLT
                     GKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYD
                     GIQYRGYGQEIAETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLV
                     YAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTED
                     VAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRDYQVNSKMMQLTGNPEVKYLHCLP
                     AFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK
                     "
     gene            complement(2585..>3103)
                     /locus_tag="JNZ57_003924"
     CDS             complement(2585..>3103)
                     /locus_tag="JNZ57_003924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000036417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HAY8829944.1"
                     /translation="WQHYQNSRKLQELIWDKLVAYVNDFNLSNQEKSRLILRLFDDVK
                     LLFNEVPVSILVNDIFLKDFFMKQPDFAKWYFYQLLKKYEGEQLYLNELGYVYGNEEK
                     TNEIVNNNPGYVVEIFEEKMGNELKIRTRMMEILRDGKINIYEYINKEQLEKLNPPED
                     LRIAIKKLGWNN"
BASE COUNT          867 a          703 c          662 g          871 t
ORIGIN      
        1 gttgtccgtt aacttccata ttagcataga gataacgctt acatttcatt aatgcccatg
       61 gtaaatagat acctagcgtt ataatcgtta acaacacatt caccacacaa ataagaaaat
      121 atctctcacc tgtaccatga aaaacaaacg aatgggacgg aacatccatt tcattaataa
      181 cttgagccat aaaaattccc tgaattaaaa aatccattga tataatttat atatacagac
      241 agtaaaatgt tctgccacgt tacaatactc ttatcagtaa taggctggca aaaactttat
      301 tgctttataa gatgcttgcg cacgtaagaa gagagtggta ttaaacaaat gtataattac
      361 tttattttta ttgggttaaa ctatgaataa cattgcgccg caatcacctg taatgcgtcg
      421 cctgacgcta caggataatc ctgctattgc ccgcgtcatt cgtcaggtat ccgccgaata
      481 cggtcttacc gctgataaag gctacaccgt cgccgatccg aatcttgacg aactgtatca
      541 agtgtatagt cagccgggtc atgcatattg ggtggttgag tacgagggtg aagtggtcgg
      601 cggcggtggg attgcgccat tagcaggtag tgaatcggac atttgcgaac tgcaaaagat
      661 gtattttctt ccggctattc gcggtaaagg gctggcgaaa aaactggcct taatggcgat
      721 ggagcaggca cgagagatgg gcttcaaacg ctgctatctg gaaacgaccg ctttttaaag
      781 gaagccattg cgctttatga gcatttgggc tttgagcata tcgactatgc acttggctgc
      841 acgggccatg ttgattgtga agtgcggatg ttgcgcgaac tctaaaaaaa tgcccgctag
      901 tgtgtgctat cgggcatttt aatcaattaa ttagtggcga accccgtcat cgtcttcatc
      961 gacaaaatct tcatcgtcgc cgtcttcgcc attaggatct tcaaaataag tgccccaacc
     1021 gtcgtactca acgtcaaatt tctccgccaa tgtcatcagt tgttcaacct gggcatcgat
     1081 cagatcggca ttcaacgcgc actcgctgag gatgtcgcag caaatcacga tatcaccatc
     1141 ttcaacttcc agctcttctg gatcggtcac ttcgtaaccg agtttaaacg cttcaactgc
     1201 tgctttttcc agggtttcca gatcgtctgc ggaaagatgg tgttcgatgg tgtacagcgc
     1261 gtccggatcg ctgccatctt ccagtaattc ttcaataatc aaacgagttt cttcacgctg
     1321 ttcttccagt tgttccgggt ttgccatggc tcattcctct taatgtcctg ccgatactct
     1381 tattgtcaca taccactgac attgcctcca cctttgtgac aaagatttat gctttagact
     1441 tgcaaatgaa taatcatcca tataaattga attttaattc attgagacgt tagccacagg
     1501 agggatctat gtccgggttt tatcataagc atttcctgaa attactcgat ttcacgccag
     1561 ctgaactcaa cagcctgctg cagttagccg cgaagctgaa agccgataag aaaagcggca
     1621 aagaagaagc caaactcact ggtaaaaaca tcgcgctcat cttcgaaaaa gactcgaccc
     1681 gtacccgatg ctctttcgaa gttgccgcat atgaccaggg tgctcgcgtt acttatctcg
     1741 gcccaagcgg cagtcagatt ggtcataaag agtcgattaa agacactgcc cgcgtgctgg
     1801 gtcgcatgta tgacggtatt cagtatcgcg gctatggtca ggagattgcc gaaacactgg
     1861 cggaatacgc tggcgtgccg gtatggaacg gcctgaccaa tgagtttcac cccacgcagt
     1921 tgctggcgga tctcctcacc atgcaggagc atttacccgg taaagcattc aacgaaatga
     1981 cgctggtcta tgcaggtgac gcacgtaaca acatgggcaa ttcgatgctc gaagctgcgg
     2041 cgcttaccgg tctggatttg cgtctggtcg cgccacaggc atgctggccg gaagctgcgc
     2101 tggttacgga atgccgcgcc ctggcacagc aaaatggcgg gaatattacg ctgacggaag
     2161 atgtagccaa aggtgttgaa ggtgctgact ttatctatac cgatgtatgg gtgtcgatgg
     2221 gggaagcaaa agagaaatgg gcagaacgga ttgcattact gcgtgattat caggtgaaca
     2281 gcaagatgat gcagttgacc ggtaacccgg aggtcaaata cctccactgc ctgcccgcgt
     2341 ttcatgacga ccagacgacg cttggtaaga aaatggcgga agagtttggc ctacatggcg
     2401 gaatggaagt gactgatgag gtcttcgaat ctgccgccag cattgttttt gatcaggcgg
     2461 aaaaccgcat gcataccatc aaagcggtga tggtcgcgac gctcagtaaa taattgatat
     2521 cgctataaag atgccgggaa atacaaaaac atcccggcat cacattattt tatgcagtaa
     2581 tagttcaatt attccacccc aattttttta ttgctatacg taaatcttcc ggaggattta
     2641 atttttctaa ctgttcttta ttaatatatt catatatatt tattttccca tcccggagga
     2701 tttccatcat tcttgttcta atttttaatt cattacccat cttttcttca aaaatctcaa
     2761 cgacataacc cggattgtta tttacaattt catttgtttt ttcttcatta ccataaacat
     2821 atcctaactc attaagatac agctgttcgc cctcatactt cttaagtaat tgatagaagt
     2881 accacttcgc aaaatcaggt tgcttcatga aaaaatcctt caaaaaaata tcatttacta
     2941 aaatgctgac aggcacttca ttaaatagca acttaacatc atcaaataac cttagtatta
     3001 agcgtgattt ttcttgattg cttaagttaa aatcattgac atatgcaacc aacttatccc
     3061 aaatcaattc ctgtaattta cggctatttt ggtaatgctg cca
//
LOCUS       DADMHC010000282         3039 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.285, whole genome shotgun sequence.
ACCESSION   DADMHC010000282 DADMHC010000000
VERSION     DADMHC010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3039)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3039)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3039
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.285"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            577..1293
                     /locus_tag="JNZ57_003925"
     CDS             577..1293
                     /locus_tag="JNZ57_003925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829945.1"
                     /translation="MNDNSLLKNSSLFIAYMGCVGWVSAYSYGWGTSFYYGFPWWVVG
                     AGLDDVARSLLYAIIVMGILFTGWGIGILFFLLIKKRSKIQDLSFFRLFFAITLLFFP
                     VIFELLILKQHFILPLSLSCIISSLVISIIIRIYGRIFSVSCFSDIPFVREHSIKLIM
                     AGFLVYFWLFSFLVGWYKPQLKKEYQMLCYNNSWYYVLARYDSRLVLSSSFKDDSNRF
                     LIFNTEQSGFYEINDVYVRK"
     gene            1845..2249
                     /locus_tag="JNZ57_003926"
     CDS             1845..2249
                     /locus_tag="JNZ57_003926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858300.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829946.1"
                     /translation="MNTALIVALMCMWYAVPAAAKETLLAMPRNSTEHCYAEINVHGP
                     YGVYFRVVPHPPGGKSWVECNSDYYYSDKPPGVQILGTHAGCRVYGICGTTSTLHVAG
                     RGVVCIKNICSPRGMIIHRIRKRPVVAVSDEM"
     gene            2312..2611
                     /locus_tag="JNZ57_003927"
     CDS             2312..2611
                     /locus_tag="JNZ57_003927"
                     /inference="COORDINATES: protein motif:HMM:NF013677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8829947.1"
                     /translation="MTKTVSTSKKTRKQHSPEFCSEALKLAERIGVAAAARELSLYES
                     QLYAWRSKLQQQMTSSERESELAAENARLKRQLAVQAEELAILQKAATYFAKRLK"
     gene            2608..2943
                     /locus_tag="JNZ57_003928"
                     /pseudo
     CDS             2608..2943
                     /locus_tag="JNZ57_003928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707076.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          859 a          628 c          688 g          864 t
ORIGIN      
        1 ttgtgggcca taaatattcc aaaaaaatag cccgctccgt ttattaccgg aacgggcgag
       61 agcatgacat tgtctgtaat tataatgaga ctgctgattc tacttatttt taatttcaag
      121 aaaagcgttt tctacaaaga attatgagat ttaatgtttt gtttagacaa tattatcatt
      181 ctgttcaata atgaaagtct tcatcaacaa caagtaaaaa caacgtccct ctcatcgaac
      241 cggacttgca gatttcccgc atccggctct cttgcaacac atcagacctt cacgttcggg
      301 cggttatggg gaaggtccag caagctgtat gagccctaac tgtttgaata ccagtagatt
      361 accagaaact tctatcgatt gaagacatta ccaactagcg ttactaaatg ttggccacgt
      421 tttgttcact tgtctggttt tgatagtagc attctgcaga gtattttgat atgataaata
      481 tgcattaaca atgatattat tgttaatttc ccagcatgaa aattaaaaga tcaacttttt
      541 atctcgaata ttttttacat tatcagttgg tttcttatga atgacaattc attgcttaaa
      601 aattcttcat tattcatcgc ctatatggga tgtgtagggt gggtcagtgc ttattcttat
      661 ggctggggaa cctcttttta ctatggattt ccatggtggg ttgttggtgc aggtttggat
      721 gatgttgcca gaagtttact ctatgctatc atagtaatgg gtatactttt taccggttgg
      781 gggattggta ttttattttt tcttcttata aagaaaagaa gtaaaataca agacttgagt
      841 ttttttagac tattttttgc tattacccta ctgtttttcc ctgtaatatt cgaactttta
      901 attctcaaac aacatttcat acttccatta tcactttcat gcattattag ttcattggtt
      961 atttcaataa taattcgcat atatggacgg atcttttctg tatcatgttt ttcagatatc
     1021 ccttttgtta gagaacacag cattaagtta attatggctg gttttttggt ttatttttgg
     1081 cttttttcct ttcttgttgg ctggtataaa cctcaattaa aaaaagaata tcagatgctt
     1141 tgttataata atagttggta ttatgttctt gctcgttatg attcacggct cgttttgtct
     1201 agttcattta aagatgacag taacagattc ttaatattta atacagaaca gtcgggattt
     1261 tatgaaatca atgatgttta tgtcagaaag taataatcct cttccacaaa gtgaattaaa
     1321 cgaatatata atgcgttcga agtatatgta ttgagctgtc atactgagaa acaaacctta
     1381 gggcagcaca attaaagcca gaaacaacta tgcaagaaag ttactaaata agtgctcgga
     1441 acagtaaaac actcaggggg gactcagtcc agattatgta atcagataaa ttgccaaaca
     1501 tcacaaatca ccagcaggac tgagtgatgc cgagcattgc accaataccc cgtgatgaac
     1561 gatgcctgat gcagaaagct ccctataaaa caaagaacaa aaactacgac cggcgattca
     1621 ccgtcatact gatgctgcat cgtggtgaca ctgtctgtca ctttcatgtt gactgaacaa
     1681 ctctgctgcg aagaaggtgt accgccggcg ggatttgatt gtccggcgtc tagcttccac
     1741 ttccctgatg gaactgaaag ttgttatggc cggtcagctt gccctgtccg caggacatga
     1801 ggtgctgtga cggacagcac cagtaacgga aagtgacaat aaaaatgaat actgcgctga
     1861 tagttgcact aatgtgtatg tggtatgcgg tacccgctgc tgcaaaagag actttactgg
     1921 ctatgccacg taattcaaca gaacattgct atgcggagat taatgtgcac ggaccatatg
     1981 gggtgtattt ccgagtggtc ccgcatcccc ccgggggaaa gagctgggtc gaatgtaaca
     2041 gtgactacta ttactctgat aaaccaccgg gagtacagat actcggaacc catgcagggt
     2101 gtcgggtata cggaatctgc gggaccacct cgacactgca tgtggctgga agaggggttg
     2161 tgtgtattaa aaatatatgc agtccacgtg ggatgataat tcacaggata cggaaacgtc
     2221 ctgtagtggc tgtaagcgat gagatgtgat cttacccagc aatagtggac acgcggctaa
     2281 gtgagtaaac tctcagtcag aggtgactca catgacaaaa acagtatcaa ccagcaaaaa
     2341 aacacgtaaa cagcattcgc ctgaattttg cagtgaagcc ctgaagcttg ctgaacgcat
     2401 cggtgttgct gccgcagccc gtgaactcag cctgtatgaa tctcagctct atgcgtggcg
     2461 cagcaaactg cagcaacaga tgacctcgtc tgagcgtgaa agtgaactgg ccgctgaaaa
     2521 tgcccgcctg aagcggcaac tggcggtgca ggcagaggaa ctggctatcc tccaaaaggc
     2581 cgcgacatac tttgcgaagc gcctgaaatg aagtatgtct ttattgaaaa acatcaggct
     2641 gagttcagca tcaaggcaat gtgccgcgtg ctccgggtgg cccgcagcgg ctggtatacg
     2701 tggtgtcagc ggcggacagg gataagccct cgtcagcagt tccgtcagca ctgcgacagc
     2761 gttgtcctcg cggcggcctt tacccggtca aaacagcgtt acggtgcacc acgcctgacg
     2821 gatgaactgc gtgctcaggg ttaccacttt aacgtaaaaa ccgtggcggc aagcctgcgc
     2881 cgtcaggggc tgagggcaaa ggcctcccgg aagttcagcc cggtcagtta ccgcgcacat
     2941 ggcctgaggt gaggtagcct gagtttaacg gacactcctt cctgaaatag aatggcatca
     3001 gaaggagcca ataatgagca gaaaaaccca acgttactc
//
LOCUS       DADMHC010000283         2990 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.286, whole genome shotgun sequence.
ACCESSION   DADMHC010000283 DADMHC010000000
VERSION     DADMHC010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2990)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2990)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2990
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.286"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            119..1306
                     /locus_tag="JNZ57_003929"
     CDS             119..1306
                     /locus_tag="JNZ57_003929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001401609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HAY8829948.1"
                     /translation="MYSSHQKPTPSDIGALPTTGGTISGPLFVTDGITGALKGNADTA
                     TKLAAAPKINGVKFDGSADINLTPENIGAFARRSTGAYADSDGAVPWNAESGAYNVTR
                     SGDSYILVNFYTGVGSCRTLQMKAHYRNGGLFYRSSRDGYGFEEGWAEVYTSKNLPPE
                     SYPVGAPIPWPSDTVPSGYALMQGQTFDKSAYPKLAAAYPSGVIPDMRGWTIKGKPAS
                     GRAVLSQEQDGIKSHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSLSGSTGSA
                     GVHTHGNGIRWPGGGGSALAFYDGGGFTYVQNSQYQVSPGTSSRRSYYQRIQTQSAGA
                     HTHSLSGTAASSGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIV
                     RLA"
     gene            1306..1878
                     /locus_tag="JNZ57_003930"
     CDS             1306..1878
                     /locus_tag="JNZ57_003930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8829949.1"
                     /translation="MAFRMSEQARTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTD
                     IAPPDIPAGFVAVFNSDEASWHLVEDHRGKTVYDVASGDALFISELGSLPGNVTWLSP
                     EGEFQKWNGTAWVKDTEAEKLFRIREAEEKKTRLIQEATDNITILQDAVNFEMATDEE
                     VSMLSSWKKYRVLVSRIDINTAPDIVWPEL"
     gene            complement(1889..2434)
                     /locus_tag="JNZ57_003931"
     CDS             complement(1889..2434)
                     /locus_tag="JNZ57_003931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001026782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine acetyltransferase"
                     /protein_id="HAY8829950.1"
                     /translation="MNISELKKCIHYEVIGCKRPFSWRKAIVRAIKHRRSRYLFWWRI
                     AKYLFDKGGYRRKIAGKIERFILDKYNVTVPLTVNIGKGFDISYLNGVVIGHKVTIGE
                     NCSIKPGVTIGLRGEFNDMDIVIGNNVTIGCNATILGGKVHIGNNVKIGAHALVLHDI
                     PDDSTFITKFHSEIIYNSSHT"
     gene            2519..2647
                     /locus_tag="JNZ57_003932"
                     /pseudo
     CDS             2519..2647
                     /locus_tag="JNZ57_003932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308311.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(2751..>2990)
                     /locus_tag="JNZ57_003933"
     CDS             complement(2751..>2990)
                     /locus_tag="JNZ57_003933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI family protein"
                     /protein_id="HAY8829951.1"
                     /translation="EICIAKEKITKMPNGAVDALKEELTRRISKRYDDVEVIVKATSN
                     DGLSVTRTADKDSAKTFVQETLKDTWKSADEWFFH"
BASE COUNT          792 a          655 c          711 g          832 t
ORIGIN      
        1 tgcgacgagt gtaaatatcc attgggattg tactgcaaat gcgtcagttt ctgtttatac
       61 ctcgccaaca tattcagcga gtaagccttc cagcgttacc tatggtgttg tttatacgat
      121 gtatagctca catcagaaac ctacaccatc agatattgga gcgctgccaa cgactggagg
      181 gactatttca ggtccgttgt ttgttactga tgggatcacc ggggcactga aggggaacgc
      241 cgataccgcg acgaaacttg cggcagcccc aaaaattaac ggtgttaagt ttgatggctc
      301 ggcggatatt aacctcacgc cggaaaatat tggtgcattt gcccgacgtt cgacgggggc
      361 ttatgcggat tcggatggag ccgttccctg gaatgccgaa tcaggcgctt acaatgtcac
      421 ccgctctggc gacagctata ttctggttaa cttctatacc ggagtcggaa gttgccggac
      481 cctgcagatg aaggcgcatt acagaaatgg tggtctgttc taccgttctt caagagacgg
      541 ttatggtttt gaggaaggct gggcagaagt ttatacctcg aaaaatcttc caccagaaag
      601 ctacccagtc ggcgcaccaa tcccgtggcc atcagatacc gttccgtctg gttatgccct
      661 gatgcagggg cagacttttg acaaatctgc ttacccgaaa cttgcagccg cttatccgtc
      721 aggcgtgatc cctgatatgc gtggctggac gattaagggc aaacctgcca gtggtcgggc
      781 cgtattgtct caggaacagg acggcattaa atcgcacacc cacagcgcca gcgcatccag
      841 tacggatttg gggacgaaaa ccacatcgtc gtttgattac ggcactaaat ccacgaataa
      901 caccggggcg catacgcaca gtctgagtgg ctctacgggg tctgccggtg ttcatactca
      961 tggtaatggt attcgttggc caggaggcgg cggttctgcg ttagcatttt atgatggcgg
     1021 tgggttcact tatgtccaga attcacagta tcaagtaagc ccggggactt cttcccgtag
     1081 atcgtattat caacgtattc agacacagtc agcaggtgct catacccact cgctgtctgg
     1141 tactgcagca agttctggcg cacatgcaca tactgtaggt attggtgcgc atacgcactc
     1201 cgttgcgatt ggttcacatg gacacaccat caccgttaac gctgcgggta acgcggaaaa
     1261 caccgtcaaa aacatcgcat ttaactatat tgtgaggctt gcataatggc attcagaatg
     1321 agtgaacaag cacggaccat aaaaatttat aatctgctgg ccggaactaa tgaatttatt
     1381 ggtgaaggtg acgcatatat tccgcctcat acaggtctgc cagcaaacag taccgatatt
     1441 gcaccaccag atattcctgc tggctttgtg gctgttttca acagtgatga ggcatcgtgg
     1501 catctcgttg aagatcatcg gggtaaaacg gtttatgacg tggcttccgg cgacgcgtta
     1561 tttatttctg aactcggctc attaccggga aatgtcactt ggttatcccc ggaaggggag
     1621 tttcagaagt ggaacggcac agcctgggtg aaggatacgg aagcagaaaa actcttccgg
     1681 atccgggagg cggaagagaa aaagacaaga ttaatccagg aagcgactga taacataaca
     1741 attctgcagg atgctgttaa ttttgaaatg gcaactgatg aggaggtttc gatgctatct
     1801 tcctggaaaa aataccgggt attagtgagt cggattgata taaatacagc cccggatatc
     1861 gtatggcctg agctgtgatt aaacggaatt atgtgtgaga tgaattataa ataatttcag
     1921 agtgaaattt ggtaatgaat gtggagtcat caggaatgtc atgcagtacc aatgcatgag
     1981 ctcctatttt tacattattc cctatatgca ctttgccacc aaggatggtg gcgttacagc
     2041 caatggttac attatttcct atgacaatat ccatatcatt aaattcaccg cgaagtccaa
     2101 tagttacccc aggcttaatt gaacaatttt cacctattgt aactttgtga ccgataacaa
     2161 cgccattgag ataagatatg tcgaaccctt taccaatatt tacagttaag ggaacggtta
     2221 cattgtattt atcaagaatg aagcgttcta tttttcctgc aatctttcgc cggtatccgc
     2281 ctttatcaaa aagatatttt gctatgcgcc accaaaataa ataacgtgat cttctgtgtt
     2341 ttattgcgcg aacaattgct tttcgccagg agaaagggcg tttacaacct attacttcat
     2401 agtgtatgca ctttttaagt tcactaatat tcatatatct attattcagt aaagataatt
     2461 ctgtaactta ttattatatt aggtttaatg ggctttttct acagtttact gtattactct
     2521 cacgccggag caataggcac aggccggacg acaaattgca tcaggagttt ctcgccagaa
     2581 ggtggtgatc atctatgatg ttggcgtatc gactttgtat aagaagtttc cggtcggaga
     2641 tgaatgaaac cgtagcacgt cgtatgcaag aacgtgccac ggctggctgg cgaactttcg
     2701 atagtgcgag tattgaatga tttccagctg ttaccgattt tacgtgttaa ttagtgaaaa
     2761 aaccactcgt cagcagactt ccaggtatct ttcagagtct cctgaacaaa agttttagct
     2821 gaatctttat cggcggtgcg cgtaacagaa aggccatcgt tgctggtggc ttttacgatc
     2881 acctctacat cgtcataacg tttactgatg cgtcgggtta attcttcctt taacgcatcc
     2941 acagcaccgt ttggcatttt agtgattttt tctttagcga tacagatctc
//
LOCUS       DADMHC010000284         2984 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.287, whole genome shotgun sequence.
ACCESSION   DADMHC010000284 DADMHC010000000
VERSION     DADMHC010000284.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2984)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2984)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2984
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.287"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(83..922)
                     /locus_tag="JNZ57_003934"
     CDS             complement(83..922)
                     /locus_tag="JNZ57_003934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000935594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY8829952.1"
                     /translation="MLNVAIENQNGWNYSVPAPHKTGAGISTPKVTRAHNRAEAVFLC
                     VMHSHIQIMVRRAGQPQGWPGSRVTGSANPVRLTTHEISTSAGELINLSLEDVIMATT
                     LSHPDVTIENGRAVTTSISIAEFFGKQHHHVVQKIESLECSELFLTSNFSRVKFEHRG
                     NSYNAYQITKNGFVFLVMGFTGKKAATFKEAYIAEFDRMEAELRQNNTPPADKMIPGD
                     GRTLVVHFDKFGNVEFTETVPDGALVCTLETFRFYLEKQGWTLVNRGAIKNMTVEQLL
                     SLK"
     gene            complement(1344..1496)
                     /locus_tag="JNZ57_003935"
     CDS             complement(1344..1496)
                     /locus_tag="JNZ57_003935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706802.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1391 domain-containing protein"
                     /protein_id="HAY8829953.1"
                     /translation="MDTIDLGNNESLVCGVFPNQDGTFTAMTYTKSKTFKTEAGARRW
                     LAKNTS"
     gene            complement(1699..2106)
                     /locus_tag="JNZ57_003936"
     CDS             complement(1699..2106)
                     /locus_tag="JNZ57_003936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY8829954.1"
                     /translation="MKNETFGARLLHRRKKLKLSQAALGKLVKVAHVTISQWERDETQ
                     PAGKRLFALSQALQCSPTWLLFGDEDKQPGEPIPDNQPAILTEDQKELLQLFDALPES
                     EQKALLSEMRARVENFNKLFEELLKARKRSANK"
     gene            2183..2410
                     /locus_tag="JNZ57_003937"
                     /pseudo
     CDS             2183..2410
                     /locus_tag="JNZ57_003937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706800.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
     gene            2394..2816
                     /locus_tag="JNZ57_003938"
     CDS             2394..2816
                     /locus_tag="JNZ57_003938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829955.1"
                     /translation="MKIRHEHIESVLLALAAEKGQAWVANAITEEYLRQGGGELPLVP
                     GKDWNNQQNIYHRWLKGETKAQREKIQKLIPAVLAILPRELRHRLCIFDTLERRALLA
                     AQEALSTAIDAHDDAVQAVYRKAHFSGGGSSDDSVVVH"
BASE COUNT          770 a          661 c          737 g          816 t
ORIGIN      
        1 tccgttaaac tcaggctacc tcagcctgag ggcaggtgta aaacaataat caagcatggg
       61 gttcatatcc atagctccat ttttatttta aggaaagcaa ctgctctacg gtcatgtttt
      121 taattgcgcc ccggtttaca agagtccagc cctgtttttc cagataaaac cggaaagtct
      181 ccagggtaca gaccagtgcg ccatcaggaa cggtttcggt gaattcgaca ttgccgaatt
      241 tgtcgaagtg aacaaccaga gtgcgaccat cacccggaat catcttgtca gcaggtgggg
      301 tgttattctg gcgcagttcg gcctccatgc ggtcgaactc agcaatgtag gcttccttga
      361 atgtggcggc ttttttgccc gtgaagccca tcaccaggaa aacgaagccg tttttggtga
      421 tttggtaggc gttataagaa ttgccgcggt gttcgaattt aacccgcgaa aagttgctgg
      481 ttaaaaatag ttcagaacat tcgagggatt ctattttttg aacaacatgg tgatgctgct
      541 tgccaaaaaa ctcagcaatc gaaatagaag tagtgacggc gcgaccattt tcgatggtta
      601 cgtcagggtg agaaagggta gtagccataa tgacatcctc aagtgataag ttaattaact
      661 caccagcaga ggtgctaatc tcatgggtgg tgagacgcac agggttagca ctaccggtca
      721 ctcgagaacc cggccagcct tgcggctgcc ccgcacgcct caccataatt tgaatgtggc
      781 tgtgcattac gcataaaaaa accgcttcag cgcggttatg cgctcgagta actttcgggg
      841 tgctaatccc ggcacccgtt ttatgaggtg caggtacact ataattccac ccgttctggt
      901 tttcaatagc tacattcaac attttctctt tcctttcatc accgaagtga attttgtgat
      961 gcggtgccta gtgcctccag gtgacgttaa ccagttaaca attacagtcg gctttcccac
     1021 ccaaaccaat aaggactaac atgactttta actgtgccgc gtgcgcttag ccgcattcac
     1081 cgcatcacaa aattcacttt aaaaagggcg gacatcagcc agcaattaaa ccgatgccgc
     1141 caactggtac ttcacacagc aatgtcgtta tttacaaccg gaagcgcact cccaccattt
     1201 aaatttcaca gacaagaccg actctttatg aataccggaa atgcgccttc gtgttgtgcc
     1261 cggttttatt tcaccacctc cgggctttgg tggcctcggc tatacctcta cagcgagaat
     1321 attgaattaa tccaataaat ggattagctg gtatttttgg caagccagcg acgtgcgcca
     1381 gcttcggttt taaacgtttt gcttttggta tacgtcatgg cggtgaatgt gccgtcctga
     1441 ttgggaaaca cgccacacac tagggattcg ttgttgccaa gatcgatagt atccatgctg
     1501 acctcatttc cccttaacgc cggggtagcg gaactgtttg ctgagaacac cgtgcggtgt
     1561 cttgatgaat gaaatttaga ataacctaag atgtgaagtc aagattttat gtagaaaaac
     1621 ctaagttttt ttgatgtaaa aaacacaagt gtttgaaagt ttgtgctttt tattacaggg
     1681 tgtggagaaa aaaggggatt atttgtttgc gcttcttttg cgagctttga gtagttcttc
     1741 aaaaagtttg ttgaaatttt caactcgagc acgcatctct gacaacaggg ccttttgctc
     1801 tgactcaggc agtgcgtcga acagttgaag taactctttt tgatcttctg tcagaatggc
     1861 tggctgatta tccgggatcg gttcgcctgg ttgtttatct tcatccccaa aaagaagcca
     1921 agtcggtgag cactgaagcg cttggctcag tgcgaataat cttttccccg ccggctgtgt
     1981 ttcatctctt tcccattgag aaattgttac gtgagccact ttgaccagct tacctaatgc
     2041 ggcctgagac agttttaatt ttttacgcct atgtaagagg cgagcaccga aggtttcgtt
     2101 tttcatatta gggaattcta atttttcttg acttaggttt ctctacgatc tagttttctt
     2161 aggaaaatct aaggagctcg atatgttgaa aattgatgct atagcgtttt ttggcagcaa
     2221 aacaaagctt gccaatgccg caggagttag gctggcaagc attgctgcat ggggggaact
     2281 ggttcctgaa ggtcgcgcga tgcgcctgca agaggcatct ggcggggaac tttagtacga
     2341 ccccaaagtt tatgacgaat atcgtaaggc aaaacgacct gggaaggtga ttcatgaaaa
     2401 tcaggcatga gcacatcgaa tcagtgctgt tagccctggc agccgaaaaa gggcaggcgt
     2461 gggtcgctaa cgcaattact gaagaatatc tgcggcaggg gggcggcgaa ttgcctctgg
     2521 taccaggcaa ggactggaac aatcagcaga atatctatca ccgttggttg aaaggtgaaa
     2581 cgaaagcgca aagggaaaaa attcagaaac tgatccctgc ggttctggca attcttccgc
     2641 gtgagctgcg tcaccgactc tgtatcttcg ataccctgga acgccgtgca ttactggcgg
     2701 cgcaggaagc gttgagtacg gcaattgatg cgcatgatga cgcagttcag gccgtttacc
     2761 ggaaagcaca tttcagcggt ggtgggtcgt ccgacgattc tgtcgttgtg cattgatgtt
     2821 tatgccgaac ctcctctggt tctgttgatt ggggaatcac agattatatc cggaggaagg
     2881 ttcggcacca gacgaggttt ctatatatga gcatgaaact aatggcaaaa gcaatggaaa
     2941 ttaaagtggg taatccattg cgtaagctgg ttctgattaa gctg
//
LOCUS       DADMHC010000285         2962 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.288, whole genome shotgun sequence.
ACCESSION   DADMHC010000285 DADMHC010000000
VERSION     DADMHC010000285.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2962)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2962)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2962
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.288"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            20..643
                     /locus_tag="JNZ57_003939"
     CDS             20..643
                     /locus_tag="JNZ57_003939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016235576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine kinase"
                     /protein_id="HAY8829956.1"
                     /translation="MLVAINDMNISNAITAEYLAQHREFIQRAKVIVADCNISEEALA
                     WILDNAANVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKV
                     AAWFHQHGLNRLVLSMGGDGVYYSDISGENGWSAPIKTNVINVTGAGDAMMAGLASCW
                     VDGMPFAESVRFAQGCSSMALSCEYTNNPDLSIANVISLVENAECLN"
     gene            631..1569
                     /locus_tag="JNZ57_003940"
     CDS             631..1569
                     /locus_tag="JNZ57_003940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HAY8829957.1"
                     /translation="MSELKISPELLQISPEVQDALKNKKPVVALESTIISHGMPFPQN
                     AQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEEIELLGREGHNVTKVSRRDLPFV
                     VAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTV
                     VCAGAKSILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSSFDVSIRLDSASEIARA
                     MAVKWQSGLNGGLVVANPIPEQFAMPEESINAAIDQAVAEAEEQGVIGKESTLFLLAR
                     VAELTGGDSLKSNIQLVFNNAILASEIAKEYQRLAG"
     gene            1663..2913
                     /locus_tag="JNZ57_003941"
     CDS             1663..2913
                     /locus_tag="JNZ57_003941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HAY8829958.1"
                     /translation="MDIMRSVVGMVVLLAIAFLLSVNKKSISLRTVGAALLLQIAIGG
                     IMLYFPPGKWAVEQAALGVHKVMSYSDAGSAFIFGSLVGPKMDVLFDGAGFIFAFRVL
                     PAIIFVTALISLLYYIGVMGLLIRILGSIFQKALNISKIESFVAVTTIFLGQNEIPAI
                     VKPFIDRMNRNELFTAICSGMASIAGSMMIGYAGMGVPIDYLLAASLMAIPGGILFAR
                     ILSPATEPSQVTFENLSFSETPPKSFIEAAASGAMTGLKIAAGVATVVMAFVAIIALI
                     NGIIGGIGGWFGFANASLESIFGYVLAPLAWIMGVDWSDANLAGSLIGQKLAINEFVA
                     YLSFSPYLQTGGTLEVKTIAIISFALCGFANFGSIGVVVGAFSAISPKRAPEIAQLGL
                     RALAAATLSNLMSATIAGFFIGLA"
BASE COUNT          692 a          670 c          812 g          788 t
ORIGIN      
        1 actcgataat accggtgaaa tgctggttgc tataaatgac atgaatatta gcaacgctat
       61 tacagctgaa tatctcgcac agcaccgtga atttattcag agggcaaagg tcattgtcgc
      121 ggactgtaat atcagtgaag aggcactggc atggattctg gataatgccg ccaacgtacc
      181 cgtatttgtc gatccggttt ccgcatggaa atgtgtcaaa gtgcgcgacc gtctaaatca
      241 gatccacact ctgaagccaa accgccttga agcggaaacc ctgagtggga ttgcgctgtc
      301 agggcgtgaa gatgtggcaa aagttgctgc ctggttccat caacatggcc tgaaccgact
      361 ggtattgagc atgggcggcg acggcgttta ttacagcgat atcagcggtg aaaatggctg
      421 gtctgcgccg atcaaaacca atgttattaa tgttaccgga gcgggtgatg ccatgatggc
      481 gggacttgct tcgtgttggg tagacggaat gccgtttgcc gaatctgttc gtttcgcaca
      541 gggatgttcg tcaatggcgc tctcctgtga atacaccaat aaccccgatt tatcgattgc
      601 caacgttata tcgttagtgg agaacgcaga atgtctgaat taaaaatttc ccctgaatta
      661 ttacaaattt ccccggaagt gcaggacgct ttaaaaaaca aaaaaccggt tgtggcgctg
      721 gaatcgacca ttatttctca cgggatgccg ttcccacaaa atgcccagac cgcaattgaa
      781 gtagaagaaa ctattcgtaa acagggcgct gtacctgcca ctatcgccat tattggcggc
      841 gtgatgaaag tgggtttaag caaagaagaa attgaattac tgggtcgtga agggcataac
      901 gtgaccaaag ttagtcgtcg cgatttacct tttgttgttg ccgccggaaa aaatggcgca
      961 accactgtgg cttcaacgat gattattgcg gcgcttgccg gaattaaagt atttgccacc
     1021 gggggaattg gtggtgtgca tcgcggggcg gaacatacct tcgatatttc tgccgatttg
     1081 caagaactgg caaatactaa tgtcaccgtt gtttgtgccg gggcgaaatc tattctcgat
     1141 ttaggattaa ccactgagta tttagaaacc ttcggtgtgc cgttaattgg ctatcagact
     1201 aaagcgctgc ctgcgttttt ctgccgtacc agctcgtttg acgtcagtat tcgtctcgac
     1261 agcgccagtg aaattgcccg tgcaatggcg gtgaaatggc aaagcgggct gaacggtggc
     1321 ctcgtggtag cgaacccgat cccggaacag tttgcgatgc cggaggaatc tatcaatgca
     1381 gccatagatc aagccgtcgc cgaagccgaa gagcagggcg ttattggtaa agaaagtaca
     1441 ctgttcctgc tggcgcgcgt tgctgagctg accggcggtg acagcctgaa atccaatatc
     1501 cagctggtgt tcaacaacgc cattctggcg agtgaaattg ccaaagaata ccagcgtctc
     1561 gcgggttaat ttctgacggg cagaaagccg tcgcccgtac tcatcaagca taccaaaacc
     1621 tggcgctgac gccgggttta ctggcatgaa gggaaaatca ttatggatat aatgagaagt
     1681 gttgtgggga tggtggtgtt actggcaata gcatttctgt tgtcagtgaa taaaaagagc
     1741 atcagtttgc gcacggttgg agccgcactg ctgctgcaaa tcgctattgg tggcatcatg
     1801 ctctactttc caccgggaaa gtgggcagta gaacaggcgg cattaggcgt tcataaagtg
     1861 atgtcttaca gtgatgccgg tagcgccttc atttttggtt cgctggttgg gccgaaaatg
     1921 gatgtcctgt ttgacggtgc gggttttatc ttcgcctttc gcgtacttcc ggcgattatt
     1981 ttcgttactg cgctcatcag tctgctgtac tacattggcg tgatggggct gctgattcgc
     2041 atccttggca gcattttcca gaaagctctt aacatcagca aaatcgaatc ttttgtcgca
     2101 gtcacaacta ttttcctcgg gcaaaatgag atcccggcga tcgttaaacc gtttatcgat
     2161 cgcatgaatc gcaacgagtt gtttaccgca atttgtagcg ggatggcgtc cattgctggt
     2221 tcgatgatga ttggttatgc cggaatgggc gtaccaattg actacctgtt agcggcatcg
     2281 ctgatggcga tcccaggtgg tattttgttt gcacgtattc ttagcccggc caccgagcct
     2341 tcgcaggtca catttgaaaa tctgtcgttc agcgaaacgc cgccaaaaag ctttatcgaa
     2401 gcggcggcga gcggtgcgat gaccgggctg aaaatcgccg ctggtgtagc gacggtggta
     2461 atggcgtttg tcgcaattat tgcgctgatc aacggcatta tcggcggaat tggtggctgg
     2521 tttggtttcg ccaatgcctc tctggaaagt atttttggct atgtgctggc accgctggcg
     2581 tggatcatgg gtgtggactg gagtgatgcc aatcttgcgg gtagcctgat tgggcagaaa
     2641 ctggcgatta acgaattcgt cgcttacctg agtttctccc catacctgca aacgggcggc
     2701 acgctggaag tgaaaaccat tgcgattatc tcctttgcgc tttgtggttt tgctaacttt
     2761 ggttctatcg gtgttgtcgt tggcgcattt tcggctattt cgccaaaacg cgcgccggaa
     2821 atcgcccagc ttggtttacg ggcgctggca gcagcaacgc tttccaacct gatgagtgcg
     2881 actattgccg ggttctttat tggtttagct tgagtttcat tgccggatgt acgcgcttat
     2941 taagcgttgc atccggcaat cg
//
LOCUS       DADMHC010000286         2945 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.289, whole genome shotgun sequence.
ACCESSION   DADMHC010000286 DADMHC010000000
VERSION     DADMHC010000286.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2945)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2945)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2945
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.289"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..273)
                     /locus_tag="JNZ57_003942"
     CDS             complement(<1..273)
                     /locus_tag="JNZ57_003942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HAY8829959.1"
                     /translation="MFSRVLALLAVLLLSANTWAAIEINNHQARNMDDVQSLGVIYIN
                     HNFATESEARQALNEETDAQGATYYHVILMREPGSNGNMHASADIYR"
     gene            600..995
                     /gene="rpsF"
                     /locus_tag="JNZ57_003943"
     CDS             600..995
                     /gene="rpsF"
                     /locus_tag="JNZ57_003943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HAY8829960.1"
                     /translation="MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGR
                     RQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPM
                     VKAKDERRERRDDFANETADDAEAGDSEE"
     gene            1002..1316
                     /gene="priB"
                     /locus_tag="JNZ57_003944"
     CDS             1002..1316
                     /gene="priB"
                     /locus_tag="JNZ57_003944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001315977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HAY8829961.1"
                     /translation="MTNRLVLSGTVCRTPLRKVSPSGIPHCQFVLEHRSVQEEAGFHR
                     QAWCQMPVIVSGHENQAITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDS
                     GD"
     gene            1321..1548
                     /gene="rpsR"
                     /locus_tag="JNZ57_003945"
     CDS             1321..1548
                     /gene="rpsR"
                     /locus_tag="JNZ57_003945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012986941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HAY8829962.1"
                     /translation="MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRI
                     TGTRAKYQRQLARAIKRARYLSLLPYTDRHQ"
     gene            1590..2039
                     /gene="rplI"
                     /locus_tag="JNZ57_003946"
     CDS             1590..2039
                     /gene="rplI"
                     /locus_tag="JNZ57_003946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HAY8829963.1"
                     /translation="MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNI
                     EFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADA
                     VTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE"
     gene            complement(2110..2904)
                     /locus_tag="JNZ57_003947"
     CDS             complement(2110..2904)
                     /locus_tag="JNZ57_003947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2686 family protein"
                     /protein_id="HAY8829964.1"
                     /translation="MTLPTTIYSFPAYLPRFSSTDKPAKLKFHQYARATLLSNRGRDH
                     NCDGRRTVEIHKLDLSDWQAFNKLATKCNAYDGVTMNGDNSFGWNHEATLDNIHAQKY
                     NKAYAGARLTAELKYLLQDVESFEPNSKYTIHKVVLGPGYGTPDYTGQTIGYVVTLPA
                     QMPNCWSSELPTIDLYIDQLRTVTGVSNALGFIIAALLNAYSDLPHDLKIGLRSLSNS
                     AAIYSGLGFERVPQDRDIRSDRMHLTPANHPDLWTQENGEWIYLRN"
BASE COUNT          760 a          670 c          715 g          800 t
ORIGIN      
        1 gcgataaata tccgcgctgg cgtgcatatt gccgttactc cccggttccc gcatcagaat
       61 tacgtggtag tacgttgcgc cctgcgcatc tgtctcttca tttaatgcct gacgtgcttc
      121 gctttcagtg gcgaaattat gattgatata aatcacgcct aagctctgta cgtcgtccat
      181 atttctggcc tggtggttat taatttcaat ggctgcccat gtatttgcac ttagcaaaag
      241 cacagccaga agggctaaaa cacgactgaa catagatacc tcctcgacgg ctgactttgt
      301 gtgctctcct ctgtgatgat cttctgattt aattttaatc aatgataaag aagttgatgg
      361 tgaccatttc tgatgcagtt gttcgaaaaa acactgtgac ggaatgtgat gaacttcaaa
      421 tcagcgagtt agttcttttg agcgaaagat gagatttatt tgtcggctgg ccttgagttt
      481 agtggggcat acaagtacta taacgcgtca tttttcagcc gacctttaac acgttccttg
      541 cctccccggg attcggctga cccagacagg aggctgaata atccgtaagg agcaattcga
      601 tgcgtcatta cgaaatcgtt tttatggtcc atcctgacca gagcgaacag gttccgggca
      661 tgatcgagcg ctacactgct gccatcactg gtgcagaagg caagatccac cgtctggaag
      721 actggggccg ccgtcagctg gcttacccga tcaacaaact gcacaaagca cactacgttc
      781 tgatgaacgt tgaagctccg caggaagtga tcgatgagct ggaaactacc ttccgcttca
      841 acgatgccgt tatccgcagc atggttatgc gtaccaagca cgctgttacc gaagcatctc
      901 cgatggttaa agcgaaagac gagcgccgtg agcgtcgcga tgatttcgca aacgaaaccg
      961 ctgatgatgc tgaagctggg gattctgaag agtaatttct gatgaccaac cgtctggtgt
     1021 tgtccggcac cgtgtgcagg actccccttc gaaaggtcag tccatcagga attcctcact
     1081 gccagttcgt gcttgagcat cgttctgtgc aggaggaagc cggttttcac cggcaggcgt
     1141 ggtgccaaat gcccgttatt gttagcggac acgaaaacca ggccattact cacagtataa
     1201 cggtcggcag tcgcataacc gttcaggggt tcatttcatg ccacaaggca aagaacggac
     1261 tgagcaaaat ggttttgcat gccgagcaga ttgaattgat agattctgga gactagccat
     1321 atggcacgtt atttccgtcg tcgcaagttc tgccgtttca ccgcggaagg cgttcaagag
     1381 atcgactata aagatatcgc tacgctgaaa aactacatca ccgaaagcgg taagattgtc
     1441 ccaagccgta tcaccggtac ccgtgcaaaa taccagcgtc agctggctcg cgctatcaaa
     1501 cgcgctcgct acctgtccct gctgccgtac actgatcgcc atcagtaatc ggtcacggtc
     1561 cattaatacg actttgagag gataaggtaa tgcaagttat tctgcttgat aaagtagcaa
     1621 acctgggtag cctaggtgat caggtaaacg ttaaagcggg ctatgctcgt aacttcctgg
     1681 taccgcaggg taaagctgtt ccagctacca agaaaaacat tgaattcttc gaagcacgtc
     1741 gcgctgaact ggaagctaaa ctggctgaag ttctggcagc tgctaatgct cgcgctgaga
     1801 aaatcaatgc actggaaact gttaccatcg cgtctaaagc tggcgacgaa ggtaaactgt
     1861 tcggttccat cggtactcgc gacatcgctg acgctgtaac tgcagctggc gttgaagtgg
     1921 ctaagagcga agttcgtctg ccgaacggcg ttctgcgtac cactggcgaa cacgaagtga
     1981 gcttccaggt tcacagcgaa gtattcgcga aagtgatcgt aaacgtagta gctgaataat
     2041 tcgttattca acgagacgta aaaacgccga ccattggtcg gcgttttgct ttctattttt
     2101 cgtcaggtat tagtttcgca agtagatcca ttcaccattc tcttgtgtcc ataagtcagg
     2161 atggtttgct ggcgttagat gcatacgatc actccttatg tctcggtcct gcggcactcg
     2221 ctcgaaacct aaacccgagt agattgctgc tgaatttgat aaggaacgca gaccaatttt
     2281 caaatcatgg ggtaaatcag aatacgcgtt tagcaatgca gcaatgatga atccgagggc
     2341 attagaaacg cctgtaacag tgcgaagttg gtcgatataa agatcgattg ttggtagttc
     2401 agatgaccag caattaggca tttgggcagg aagggttaca acgtatccta tcgtttggcc
     2461 ggtatagtct ggagtaccat aaccaggtcc caaaaccact ttgtgtattg tgtatttact
     2521 gttgggttcg aaggattcga catcttgcaa taaatatttc agttctgcgg ttaacctcgc
     2581 acccgcgtaa gctttattgt atttctgggc gtgaatatta tctaatgtag cttcatggtt
     2641 ccatccaaaa gaattatcac cattcattgt tactccatcg taagcattac acttcgttgc
     2701 taacttattg aatgcttgcc agtcagagag atctagtttg tggatctcaa cagtacgtct
     2761 gccatcgcaa ttatgatctc ttccacgatt tgacagtaat gtagcgcgtg cgtattgatg
     2821 aaattttaat tttgctggtt tgtcggtgga cgaaaaacga ggtaaatatg cggggaatga
     2881 ataaatagtt gttggtaatg tcattttatt gttgcctgtt taatgttttt acaaatatcg
     2941 cagtt
//
LOCUS       DADMHC010000287         2942 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.290, whole genome shotgun sequence.
ACCESSION   DADMHC010000287 DADMHC010000000
VERSION     DADMHC010000287.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2942)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2942)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2942
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.290"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(48..232)
                     /locus_tag="JNZ57_003948"
                     /pseudo
     CDS             complement(48..232)
                     /locus_tag="JNZ57_003948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311258.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4102 domain-containing protein"
     gene            complement(394..468)
                     /locus_tag="JNZ57_003949"
     tRNA            complement(394..468)
                     /locus_tag="JNZ57_003949"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(433..435),aa:Arg,seq:cct)
     gene            complement(544..1476)
                     /locus_tag="JNZ57_003950"
     CDS             complement(544..1476)
                     /locus_tag="JNZ57_003950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HAY8829965.1"
                     /translation="MDNDKIDQHSDEIEVESEEKERGKKIEIDEDRLPSRAMAIHEHI
                     RQDGEKELERDAMALLWSAIAAGLSMGASLLAKGIFHVELEGVPGSFLLENLGYTFGF
                     IIVIMARQQLFTENTVTAVLPVMQKPTMSNVGLLMRLWGVVLLGNILGTGITAWAFEY
                     MPIFNEETHDAFVKIGMDVMKNTPSEMFANAIISGWLIATMVWMFPAAGAAKIVVIIL
                     MTWLIALGDTTHIVVGSVEILYLVFNGTLHWSDFIWPFALPTLAGNICGGTFIFALMS
                     HAQIRNDMSNKRKAEARQKAERAENIKKNDKNPA"
     gene            1770..2525
                     /gene="mlaA"
                     /locus_tag="JNZ57_003951"
     CDS             1770..2525
                     /gene="mlaA"
                     /locus_tag="JNZ57_003951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding lipoprotein MlaA"
                     /protein_id="HAY8829966.1"
                     /translation="MKLRLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNF
                     NVLDPYIVRPVAVAWRDYVPQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTR
                     FFLNTILGMGGFIDVAGMANPKLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRD
                     DGGDMADGLYPVLSWLTWPMSVGKWTLEGIETRAQLLDSDGLLRQSSDPYIMVREAYF
                     QRHDFIANGGELKPQENPNAQAIQDDLKDIDSE"
     gene            complement(2707..2919)
                     /locus_tag="JNZ57_003952"
     CDS             complement(2707..2919)
                     /locus_tag="JNZ57_003952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005092548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829967.1"
                     /translation="MDDAKFRRDNVKEIISTLFANKVDVDHPENKYKDFKDLEDKVEK
                     RLQNRQTEYQNEINQLSAPDVNFDDI"
BASE COUNT          737 a          674 c          690 g          841 t
ORIGIN      
        1 atcttttacg gggtgaaggt aggtttcgta tgaagggtat ctgttgtctc ctgcaaagtc
       61 ataagcggat attttcctac ggtcagtatt ttttccttac cgtcaatctt gtagcgaagt
      121 tgccatacct tttcccggat acaggaacat aaaggtacag gccattacca tcgagaaggc
      181 ggtatggttt ttctttcggc tttgctgctt caatctgctt aacggtgagc atgggtaaaa
      241 atccggtggg taaaattatt ttatccactt tttacccgtc atggagtgcg gctgtcaacg
      301 atctgacgcg aaccatgacg aaccgtgaat atacggaagg cttgatattc aggggatttt
      361 gcggactggt acggatggga gcgaactgat aaatggtgtc ccctgcagga atcgaacctg
      421 caattagccc ttaggagggg ctcgttatat ccatttaact aagaggacaa tgcggcatga
      481 gtatacccgc taatggactg cggagtaagt acactgccgc tcgattgctt aaaccctcgc
      541 catttatgct gggtttttat catttttctt aatgttttcc gcacgttctg ctttttggcg
      601 tgcttctgct ttgcgcttgt tgctcatgtc gttacggatc tgtgcatgac tcattaacgc
      661 gaagataaag gtgccgccgc agatattccc cgctaaagta ggtagtgcga agggccaaat
      721 gaaatcgctc cagtgcagcg tgccgttaaa caccagatag aggatttcta cagaaccgac
      781 aacgatgtgg gtggtgtcac ccagtgcaat aagccaggtc atcaatataa tcaccacaat
      841 ctttgccgca cccgctgcag gaaacatcca aaccatagtg gcgatcagcc agccggaaat
      901 gatcgcgttg gcaaacatct cgctgggggt attcttcatc acatccatgc cgattttgac
      961 aaatgcatcg tgagtttctt cattgaagat aggcatatat tcaaatgccc atgcagtaat
     1021 acctgtcccg agaatattac ccagcagcac gacgccccat aatcgcataa gtaagccgac
     1081 gttgctcatt gtcggttttt gcatgacggg tagtaccgca gtcacggtgt tttcggtaaa
     1141 taattgctgg cgggccataa tgacgataat aaaaccaaag gtataaccga gattctccaa
     1201 caagaagctg cccggcacgc cttccagttc gacatgaaat atcccttttg ccagtaacga
     1261 agcgcccatc gacagacccg ccgcaatggc tgaccacagt agtgccattg cgtcgcgttc
     1321 cagctctttt tcaccatcct ggcggatatg ttcatgaatt gccatcgccc gggaggggag
     1381 tcgatcttca tctatttcta tttttttgcc gcgctctttt tcttcgctct caacttcaat
     1441 ttcgtcgctg tgttgatcaa ttttgtcgtt gtccatggtc tcttctcttg aattagcacg
     1501 tatagctaaa gcgtagcggc ttttttgctc gcaactggcg ggagttactc tgaaaatgta
     1561 gaaaaggccg cgtttgcctt tttctgtttc tatagaatca agtagcctac agggcggcga
     1621 ttaccaagct atgatcaaat cagcaaatca gggcgtctgg acatcagttg acgtgctgtt
     1681 acaatcgccc acacctaaac aggcggatac ggtatcgttc cgtcatggat ggcaaactgc
     1741 ataagccata aaaaaacagg gagacattta tgaagcttcg cctgtcggcg cttgctctgg
     1801 gaactacgct tctggtgggg tgtgcgagtt ccggtacaga tcagcaaggg cgttctgacc
     1861 cgttagaagg gttcaaccgc accatgtaca acttcaactt caatgtatta gacccgtata
     1921 ttgttcgacc ggtcgctgtc gcctggcgtg attatgttcc gcaaccggcg cgtaacggtt
     1981 tgagcaactt taccggcaac cttgaagaac ctgcggtgat ggttaactac ttcttgcagg
     2041 gcgaccctta tcaggggatg gtccacttta cccgcttttt cctgaacacc attttgggga
     2101 tgggcggctt tattgatgtt gcagggatgg cgaacccgaa actgcaacgg actgaacctc
     2161 accgcttcgg tagtacgctt ggtcattatg gcgtgggtta tgggccttac gttcagttac
     2221 cgttctacgg tagcttcacg ctgcgtgatg acggtggtga tatggcggat ggtctttacc
     2281 cggttctttc ctggctgacc tggccgatgt ctgtgggtaa atggacgctt gaagggatcg
     2341 aaacccgcgc tcagctgctg gattccgatg gtctgctgcg tcagtcgtcc gatccttata
     2401 ttatggtgcg cgaagcgtac ttccagcgtc atgatttcat cgctaatggc ggcgaactca
     2461 aaccgcagga aaatccgaac gcacaagcga ttcaggatga tttaaaagat attgattctg
     2521 aataagaaac aaataaaaaa ggtgagtcgc aaaactcacc ttttttgttg ttatccctca
     2581 attaccacaa gtaaaaggag ataaaccgac aatgacccgg acgtaatgat gtaaaaatac
     2641 tgatgttcgt cactgactat ttccgatatt caggcgttga aaaatcaaaa aactggaaaa
     2701 ataattttaa atatcatcaa aattaacatc tggcgcagat agttgattaa tttcattttg
     2761 atattccgtc tggcgatttt gaagcctttt ttcaacttta tcttcgagat ccttaaagtc
     2821 tttgtattta ttttcaggat ggtcaacgtc aactttgtta gcgaataaag tagaaattat
     2881 ttcttttaca ttatcgcgtc taaattttgc atcgtccact tgaaaattat atcttattgc
     2941 tc
//
LOCUS       DADMHC010000288         2881 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.291, whole genome shotgun sequence.
ACCESSION   DADMHC010000288 DADMHC010000000
VERSION     DADMHC010000288.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2881)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2881)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2881
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.291"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..342
                     /locus_tag="JNZ57_003953"
     CDS             <1..342
                     /locus_tag="JNZ57_003953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000633896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glycosidase"
                     /protein_id="HAY8829968.1"
                     /translation="YGSEIGIDGFKSMTLENNRKCMIWDENKQDLELRQFIRWLIRLR
                     KKHPQWCEASIQWKDVEHPTVIAYQRDNITFFLNNSEDTANFIYDGRSMEISGFSYEI
                     EGLPAADLYDF"
     gene            364..1161
                     /locus_tag="JNZ57_003954"
     CDS             364..1161
                     /locus_tag="JNZ57_003954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000582547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HAY8829969.1"
                     /translation="MIIDAHTHIGDFVKISMPEDVFLASLDKYNIDFALCSCGSAVEV
                     DHDQNPIPDEDQVTQHDNNERMLRLVRQHAKRIGAFMWIKPRLESCDQDFEDMIASNR
                     DIIYGIKVHPYHSKMAFNSEKVQDYIRLAQKYDLPVVSHTSNDYESSPQLFYEMALKY
                     PDVNFVMCHMGLATDNQEAIELIAKLPNLYGDTVWVRADMVYQAIKICGSDKILFGTD
                     NPINGLDTYNDDDFYNKYFTELKSKLTQSEFEQLMFTNAKKNFKIKI"
     gene            1254..2079
                     /locus_tag="JNZ57_003955"
                     /pseudo
     CDS             1254..2079
                     /locus_tag="JNZ57_003955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001342239.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
     gene            2150..>2881
                     /locus_tag="JNZ57_003956"
     CDS             2150..>2881
                     /locus_tag="JNZ57_003956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005138488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NGG1p interacting factor NIF3"
                     /protein_id="HAY8829970.1"
                     /translation="MVAVSQPTVDKIIFGAEATLINKIGTCWIASMDVLRKAVFEGVN
                     IIITHETTFYSYADLEGDDLEFSWARKIMDYTRGELSYLKIIEQKKEFLHKNNLVIIR
                     CHDVMDREPTFGMSKALAQQLELDVTNIVASDEMYCVYAIEPDSVINITKRFAKNLKI
                     YNLPGIQFYGDKARVVRTVGIGAGCFCDPIQYMEYQADYYITINDSIKTWVQTQYSKD
                     SGLPMAVIGHSVAEEAGMRRLASYLD"
BASE COUNT          878 a          461 c          616 g          926 t
ORIGIN      
        1 tacggtagcg aaataggaat tgatggtttt aaatcaatga cgcttgagaa taatagaaaa
       61 tgtatgatat gggatgaaaa caaacaagat cttgaattac ggcaatttat acgttggtta
      121 atacgtctac gtaaaaaaca tccacaatgg tgtgaggcat caatacaatg gaaagatgtt
      181 gaacatccta cggtgatcgc ttatcaacgc gataacatca ctttcttctt aaataatagt
      241 gaagatactg ccaactttat ttatgacgga agaagtatgg agatctccgg tttcagttat
      301 gaaattgaag gtttacctgc tgctgatctt tatgattttt aaatttcaat taggatgttt
      361 gttatgataa ttgatgcaca cactcatatt ggtgattttg tgaaaatcag catgccagaa
      421 gatgtttttc tggcatctct ggacaagtat aatattgatt ttgcgttatg ttcctgtgga
      481 tctgctgttg aagttgacca tgaccagaac ccgattccgg atgaagatca agttacacag
      541 catgataaca atgaacgtat gctcagactt gttcgtcaac atgcaaagcg aattggcgcg
      601 tttatgtgga ttaagcctcg tctggaaagt tgtgatcaag actttgaaga tatgattgcc
      661 agcaatcgag atatcattta tggcatcaaa gttcaccctt atcattcaaa aatggctttc
      721 aactcagaaa aagttcagga ttatatacgc cttgctcaaa aatatgatct cccggtagtt
      781 agccatactt ctaatgatta tgaatccagc ccacagttat tttatgagat ggcacttaag
      841 tatccagacg tgaattttgt tatgtgtcat atggggctcg cgacagataa tcaggaagca
      901 atcgaattga ttgcaaaact tcctaatctc tatggcgata ctgtgtgggt tagggcggat
      961 atggtttacc aggcgataaa aatctgtggt agtgataaga ttttattcgg taccgataat
     1021 cctattaatg ggctggatac gtacaatgat gatgattttt ataataagta ttttactgaa
     1081 ttaaaaagta aattaacgca aagtgagttt gaacaactta tgtttaccaa tgcgaaaaaa
     1141 aattttaaga taaaaatata gttattagtc atttctaagt gctccccata tagaatgtgg
     1201 taggggagtg cttagatgtt atatttcatt ttgcattgag gttaatttaa atcatgaacg
     1261 atattgagaa ctatgggaat cgctatcatg tgttgcaatc ttttcctatg ccacaattgg
     1321 cgagtagtcg cgaaataaga atattactgc ctgcgttcta ttatgaatct gatatcagtt
     1381 accctgtaat atatatgcac gatgggcaaa atttatttga taaatctgta tcttttggtc
     1441 cacatgtatg ggatatacct gaggcggtag atgctttttt ctcaaattca caatacgacg
     1501 gtgttatcat tgtggggatt gataacgcat cgtctcatgg taaattcagc cgtatggatg
     1561 agtattctcc atggccgcga aacacatctt ttcccttacc tggctgggac cctgctgtgg
     1621 attatagtgg aggaaaaggc gtttattgtg aatacgctca agaactatgt tgacagtaat
     1681 tttagaactc tcccagatcg taataataca gcgatagcag gtagttctat gggtgcgtac
     1741 atcagtttgt ttgccgcaat tcttcgtcag gacgtttttt caaaagttgg cgttttttcg
     1801 ccggcactat ggttcaatga cagcgcaatg ctgaatttta ttcaggaaaa caacatcgtt
     1861 gaagatctta ctgtatatct cgatgtcggt acgcaggaaa ccagtggtat gcgcgaagac
     1921 tttcctgaag tctatatttc cggtgctgaa aaattatgcg tgagtctccg taaacaacgc
     1981 aatgtaacta tagattatca tttatgggga ggtgataccc actctgagtc tgcatgggca
     2041 aaacgtttcc cagaaatgtt gaaattattt tattgctgat gaaacctgtg aaggatgttg
     2101 aatgcatcat attaaaacag ccgcggatct taattgtttt ttaaattcaa tggttgctgt
     2161 ttcgcaacca acagttgata aaattatttt tggtgctgag gcgacactta ttaataaaat
     2221 tgggacctgc tggattgcct caatggatgt tttaagaaag gctgtttttg aaggtgtcaa
     2281 tatcattatt acacatgaga ctacatttta ttcttatgct gatctggagg gtgacgatct
     2341 tgagttttca tgggccagaa aaataatgga ttatactcgc ggtgaactca gttatttaaa
     2401 aataattgag caaaaaaagg agtttttgca taaaaataat ttggtaatca ttcgttgcca
     2461 tgatgtcatg gatcgagagc ctacgttcgg aatgtctaag gctttggctc agcagttaga
     2521 actggatgtt acaaatattg ttgcttctga tgagatgtac tgtgtatatg ctatagaacc
     2581 tgacagtgtc attaacatta ccaaacgttt tgccaaaaat ttgaaaatat ataatcttcc
     2641 tggcattcaa ttttatggag ataaagccag agtagtcaga actgttggca ttggggcagg
     2701 ctgtttttgt gatccaatac aatatatgga atatcaggct gattattata ttacgattaa
     2761 cgattcaatt aaaacatggg tgcagacaca atactccaaa gatagtggct taccgatggc
     2821 agttattgga catagtgttg cagaggaagc gggtatgcga cgtcttgcaa gctatttaga
     2881 t
//
LOCUS       DADMHC010000289         2825 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.292, whole genome shotgun sequence.
ACCESSION   DADMHC010000289 DADMHC010000000
VERSION     DADMHC010000289.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2825)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2825)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2825
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.292"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..959
                     /locus_tag="JNZ57_003957"
     CDS             <1..959
                     /locus_tag="JNZ57_003957"
                     /EC_number="1.1.1.58"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tagaturonate reductase"
                     /protein_id="HAY8829971.1"
                     /translation="IIIPCELIDYNGDALRELVLRYAQEWALPEAFIQWLDQANSFCS
                     TLVDRIVTGYPRDEVAKLEEELGYHDGFLDTAEHFYLFVIQGPKSLATELRLDKYPLN
                     VLIVDDIKPYKERKAAILNGAHTALVPVAFQAGLDTVGEAMNDAEICAFVEKAIYEEI
                     IQVLDLPRDELESFASAVTGRFRNPYIKHQLLSIALNGMTKFRTRILPQLLAGQKANG
                     TLPARLTFALAALIAFYRGERNGETYPVQDDAHWLERYQQLWSQHRDRVIGTPELVAI
                     VLAEKDHWEQDLTQVPGLVEQVANDLDAILEKGMREAVRPLC"
     gene            1156..2070
                     /locus_tag="JNZ57_003958"
     CDS             1156..2070
                     /locus_tag="JNZ57_003958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416037.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829972.1"
                     /translation="MIVRPQQHWLRRIFVWHGSVLSKISSRLLLNFLFSIAVIFMLPW
                     YTHLGIKFTLAPFSILGVAIAIFLGFRNNAGYARYVEARKLWGQLMIASRSLLREVKT
                     TLPDSASVREFARLQIAFAHCLRMTLRKQPQAEVLAHYLKTEDLQPVLASNSPANRIL
                     LIMGEWLAVQRRNGQLSDILFISLNDRLNDISAVLAGCERIAYTPIPFAYTLILHRTV
                     YLFCIMLPFALVVDLHYMTPFISVLISYTFISLDCLAEELEEPFGTENNDLPLDAICN
                     AIEIDLLQMNDEAEIPAKILPDRHYQLT"
     gene            complement(2074..2805)
                     /gene="tam"
                     /locus_tag="JNZ57_003959"
     CDS             complement(2074..2805)
                     /gene="tam"
                     /locus_tag="JNZ57_003959"
                     /EC_number="2.1.1.144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000545752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trans-aconitate 2-methyltransferase"
                     /protein_id="HAY8829973.1"
                     /translation="MHFSAERSRPAVELLARVPLENVEYVADLGCGPGNSTALLQQRW
                     PAARITGIDSSPAMIAEARSALPDCQFVEADIRNWQPVQALDLIFANASLQWLPDHYE
                     LFPHLVSLLNPQGVLAVQMPDNWLEPTHVLMREVAWEQNYPDRGREPLAGVHAYYDIL
                     SEAGCEVDIWRTTYYHQMPSHQAIIDWVTATGLRPWLQDLTESEQQLFLKRYHQMLEE
                     QYPLQENGQILLAFPRLFIVARRME"
BASE COUNT          662 a          713 c          718 g          732 t
ORIGIN      
        1 ggatcatcat tccgtgtgag ttgattgact acaatggcga cgcgttgcgt gaactggtgc
       61 tgcgctatgc gcaagagtgg gcactgccag aagcatttat tcaatggctg gatcaggcta
      121 acagcttctg ttctacgctg gtggaccgta tcgttaccgg ttatccgcgc gatgaagtgg
      181 ctaaactgga agaagaactg ggttatcacg atggttttct cgacaccgct gaacactttt
      241 acctgtttgt gattcagggg ccgaaatcct tagcgactga gctgcgcctg gacaaatatc
      301 cgctcaatgt gctgattgtt gacgatatta aaccgtataa agaacgcaaa gcggcaatcc
      361 tcaacggtgc gcacaccgcg ctggtgccgg tggcgttcca ggcagggctg gataccgtag
      421 gtgaagcgat gaacgatgct gaaatttgcg cattcgttga aaaagccatc tacgaagaaa
      481 ttattcaggt actggatttg cctcgtgatg aactggaatc tttcgccagt gcagtcaccg
      541 ggcgtttccg taacccgtac attaagcatc agctgctgtc tatcgcgctc aacggtatga
      601 ccaagttccg cacccgcatc ctgccgcagc tgctggcagg gcagaaggca aacggcacac
      661 ttccggcgcg ccttactttc gcattagcgg cattgattgc cttctatcgc ggtgagcgta
      721 acggagaaac atatccggta caggacgatg cacactggct ggaacgttat cagcaactct
      781 ggagccagca tcgtgaccgt gttatcggca ccccggaact ggtagcgatt gttttggcag
      841 aaaaagacca ctgggagcag gacctgacgc aagtgcctgg tctggtcgag caggttgcta
      901 atgacctgga tgcgattctt gaaaaaggga tgcgcgaagc tgtacgcccg ttgtgctaat
      961 actctgaacc cggtttcgac cgggtttctt atttcactat attagttaca acattctata
     1021 tgcctttatc attaacaggt gccacatgca gcgcctgtta atgttgtaag cttgtaggta
     1081 atttgtaagt agcgtcttga gaatgtgatc gtaatcacgt ttaatagggc gacttttcca
     1141 cgcctgaaga taaccatgat tgttcgtcca caacaacact ggctgcgccg tatttttgtc
     1201 tggcacggct cagtattatc caagatatcc tcgcgcttac tactcaattt tctcttttct
     1261 atcgctgtta ttttcatgct gccctggtac acgcatctgg gcatcaaatt caccctcgca
     1321 ccgttcagca ttctcggtgt cgccatcgcc atttttcttg gttttcgtaa taatgccggg
     1381 tacgcccgtt acgttgaagc gcgaaaactt tggggacagt tgatgattgc ctcacggtcg
     1441 ttactacgtg aggtaaaaac gacattgccg gattcggcaa gtgtaaggga gtttgccagg
     1501 ctgcaaatcg ccttcgccca ctgtttacgc atgacattac gcaaacagcc acaggcggaa
     1561 gtgctggctc attatctcaa gactgaagat cttcagcctg tactggcttc gaactctcca
     1621 gctaaccgta tcttgttaat aatgggggag tggttggcgg ttcagcgccg caatgggcag
     1681 ctttcagata tcctgtttat tagcctcaac gatcggctta atgatatttc agcggtcctg
     1741 gcaggatgcg agcgcattgc ctatacgcca attccctttg cctacaccct gattttgcat
     1801 cgtactgttt atctgttttg tatcatgctg ccgttcgcgc tggtcgtgga cctgcattac
     1861 atgacgcctt ttatctctgt gctgatttcc tacactttta tttcgctgga ttgtctggcg
     1921 gaagaactgg aagaaccgtt cggtactgaa aacaatgatt taccgctgga tgccatctgc
     1981 aacgctattg aaattgacct cttacagatg aacgatgaag ccgaaattcc agcaaaaatt
     2041 cttcccgatc gtcattacca gctgacgtga tatttactcc atacgccggg caacaataaa
     2101 aagacgcgga aatgccagca gtatctgtcc gttctcttgc agtggatact gctcttccag
     2161 catctgatgg tagcgcttaa gaaaaagctg ctgttcgctc tcggtcagat cctgtaacca
     2221 cggacgtaat ccagtggcgg tcacccaatc gataatcgcc tggtgcgacg gcatctggtg
     2281 atagtaggtg gttcgccaga tatcgacctc acatccggct tcgctcaaaa tatcgtagta
     2341 agcatgaacg ccagccaacg gctcacgccc gcgatccggg tagttttgtt cccaggcaac
     2401 ttcgcgcatg agcacatggg tcggctccag ccagttatct ggcatctgta ctgccagcac
     2461 gccctgcgga ttaagtaaag aaaccaagtg aggaaacaat tcgtagtggt caggcagcca
     2521 ttgcagtgag gcattagcaa aaatcagatc gagtgcctgt accggttgcc agttgcggat
     2581 gtctgcttcc acgaactggc agtctggcaa agcactgcgc gcttcagcaa tcatcgccgg
     2641 agacgagtcg atgcctgtta tcctggccgc aggccaacgt tgttgtagaa gggcggtgct
     2701 gttacctggg ccacagccaa gatcggcgac atattcgaca ttttccagcg gcactctggc
     2761 aagcagctcc accgccggac gcgatcgttc agcggaaaag tgcaaatata aagaggggtt
     2821 ccagt
//
LOCUS       DADMHC010000290         2819 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.293, whole genome shotgun sequence.
ACCESSION   DADMHC010000290 DADMHC010000000
VERSION     DADMHC010000290.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2819)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2819)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2819
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.293"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..102)
                     /locus_tag="JNZ57_003960"
     CDS             complement(<1..102)
                     /locus_tag="JNZ57_003960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3313 domain-containing protein"
                     /protein_id="HAY8829974.1"
                     /translation="MRTTSFAKVAALCGLLALSGCASKITQPDKYSGF"
     gene            complement(405..998)
                     /gene="tehB"
                     /locus_tag="JNZ57_003961"
     CDS             complement(405..998)
                     /gene="tehB"
                     /locus_tag="JNZ57_003961"
                     /EC_number="2.1.1.265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance methyltransferase TehB"
                     /protein_id="HAY8829975.1"
                     /translation="MIIRDENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRN
                     SLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILST
                     VVLMFLEAKTIPGLIANMQRCTKLGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYY
                     EGWERVKYNEDVGELHRTDANGNRIRLRFATMLARKK"
     gene            complement(995..1987)
                     /gene="tehA"
                     /locus_tag="JNZ57_003962"
     CDS             complement(995..1987)
                     /gene="tehA"
                     /locus_tag="JNZ57_003962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate transporter/tellurite-resistance
                     protein TehA"
                     /protein_id="HAY8829976.1"
                     /translation="MQSDKVLNLPAGYFGIVLGTIGMGFAWRYASQVWQVSHWLGDGL
                     VILAMIIWGLLTSAFITRLIRFPHSVLAEVRHPVLSSFVSLFPATTMLVAIGLVPWFR
                     PLAVCLFSFGVVVQLAYAAWQTAGLWRGSHPEEATMPGLYLPTVANNFISAMACGALG
                     YTDAGLVFLGAGVFSWLSLEPVILQRLRSSGELPTALRTSLGIQLAPALVACSAWLSV
                     NGGEGDTLAKMLFGYGLLQLLFMLRLMPWYLSQPFNASFWSFSFGVSALATTGLHLGS
                     GSENGFFHTLAVPLFIFTNFIIAILLIRTFALLMQGKLLVRTERAVLMKVEDKE"
     gene            2180..2819
                     /locus_tag="JNZ57_003963"
                     /pseudo
     CDS             2180..2819
                     /locus_tag="JNZ57_003963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001735206.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          804 a          681 c          643 g          691 t
ORIGIN      
        1 aaaaccagaa tatttatctg gctgggtgat tttagaggca caaccagaca gagccaacaa
       61 gccgcataaa gctgcaactt tcgcaaatga tgtggtacgc atgaatagtt tcctgagatg
      121 attatattac tttttaagtt atagcaaaaa gcgccgcttc gtgttgtggc aaaaaaagtg
      181 ttggtgaaaa taaatttttc agcccctttt cagacgacat agtcaatgcc gaaaaagggg
      241 ctaagtcaat catcagtagt taaatttcag taagttaagc tgctaaaaaa cttcgactac
      301 tgtgattaat ttcacatccc ttcgataaaa aatatgctta ccgaaaagaa gaacagtaaa
      361 tcatctcagc gtggggaatt ttcacgcgcc ttattcttag cgggtcattt tttacgtgcc
      421 agcatcgtgg cgaaacgcag tctaatacga ttaccgttgg cgtcggtgcg gtgcagctcg
      481 ccgacgtctt cattgtattt caccctctcc cagccttcgt aatatcgacg taattctccc
      541 tctttgaagg caaacgggaa gccgacggta catggataat cagcggtatc catcgccgcc
      601 acaatcaggt tgtaaccacc aagtttagtg caacgttgca tattggcaat cagccctggg
      661 atggttttag cctcaaggaa catcagtacc acagtcgaaa gaataaaatc gtactgtcta
      721 tcaaatgtga ggttattcag atcaacgact cgggtgtgta aattatccag attttcaatg
      781 gatttaatgc gctctacatt ggcgatactc atggcatttt tatcccatgc gtcaacatca
      841 taaccattgg ctgccaggta aagactgtta cgaccattgc cacagcccag atccagcgtt
      901 ttacccggtt taaccacttt caccgcttcc agtacttcag agtgtgtgcg ggttaattca
      961 tatttatcag taaaatagtt ttcgtcacga atgatcattc tttgtcctct actttcatta
     1021 aaacagcgcg ctcggttctg actaacaatt tcccctgcat cagaagcgca aaagtacgga
     1081 tgagcagtat tgcaataata aaattggtaa agataaacag cggtaccgcc agcgtatgga
     1141 aaaatccatt ttcgctgcca ctccccagat gcaaaccggt ggttgccagt gcagatacgc
     1201 cgaacgagaa actccagaat gaagcattaa atggctggga gagataccat ggcatcagac
     1261 gtagcataaa cagcagttgc agcagtccat aaccaaaaag cattttcgcc agcgtatcac
     1321 cctcgccgcc gttgacgctc aaccaggcac tacaggccac cagcgcagga gcgagctgaa
     1381 tgccgagtga tgtccgcagt gccgtgggta attctcccga actgcgcaga cgctgcaaga
     1441 tcaccggttc aaggcttagc catgagaaaa cgcctgcgcc taaaaacacc agaccggcgt
     1501 cggtgtagcc caacgcacca caggccattg cgctgataaa gttgttggca actgtcggca
     1561 gatacagtcc aggcatggta gcttcttcag ggtgagatcc gcgccataat cccgcagttt
     1621 gccaggcggc ataagccaac tgaaccacga caccaaaact gaacaggcac accgccagtg
     1681 ggcgaaacca cggaaccaaa ccaatcgcca ccagcatcgt cgttgccgga aacaaactca
     1741 caaaactgct cagcactgga tggcgaactt ccgccagcac gctatgcgga aagcgtatga
     1801 gtcgggtaat aaatgcgcta gttaataatc cccagatgat catcgccaga atcaccagcc
     1861 catcccctaa ccagtggctg acctgccaaa cctggctggc atagcgccag gcaaatccca
     1921 tccctatcgt ccccaacaca ataccaaagt agcctgccgg caaattgagc actttatcgc
     1981 tctgcatctt cttactcatt ttgtttaatt tataaagtat atttgaaatg cattttatgg
     2041 aattttctcg agcatagcca gagccgcaga atttgctacg gttatagtaa gtcacctgtg
     2101 agaaaacgct atgcgcaaat atcgtctaag tgaagaacag cgagccttta gttatcagga
     2161 agatggcact taaaaaagtg tgttattacg gcagattatc gccattagcg attttaacga
     2221 tgtgatagca ggaaccgctg gcggctggat cgatcgcgaa acggtgttag cataggaagg
     2281 aaattgctgg atttacgacc agaatgctat tgcgttcggc ggaacggtga tttctggtaa
     2341 tacgcgtatc accggcacca gcgtgctgtg gggagaggtt tacgcaacgg ataacgtctg
     2401 gatcgataat agtgaaatca gtcagggtgc atatataagt gacagcgtca ccattcatga
     2461 ctcattagtt tacgggcaat gtagaatatt tggtcacgcc ttaattgatc aacattctat
     2521 gatcgtcgcc gcacaaggct taacgcccga ccatcaactc ctgctccaaa tttatgatcg
     2581 cgcaagggtt agcgcctcgc gtattgtcca ccaggcacaa atttatggcg atgccgtcgt
     2641 ccggtatgct tttattgaac atcgcgccga agtttttgat tttgccagtg ttgaaggtaa
     2701 tgaagagaac aacgtctggc tatgcgattg cgctaaagtc tacggtcacg cgcaggtgaa
     2761 agctggcata gaagaagatg ccattccgac gattcattac agttcgcagg tggcggaat
//
LOCUS       DADMHC010000291         2784 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.294, whole genome shotgun sequence.
ACCESSION   DADMHC010000291 DADMHC010000000
VERSION     DADMHC010000291.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2784)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2784)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2784
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.294"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..253)
                     /locus_tag="JNZ57_003964"
     CDS             complement(<1..253)
                     /locus_tag="JNZ57_003964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310537.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829977.1"
                     /translation="MMSNVKKKDVPLISISLVAILFIAAALSLFPQQSADAANAIYTF
                     VTRTLGSAVQVLVLLAMGLVIYLATSKYGNIRLGEGKPEY"
     gene            complement(503..1588)
                     /gene="dmlA"
                     /locus_tag="JNZ57_003965"
     CDS             complement(503..1588)
                     /gene="dmlA"
                     /locus_tag="JNZ57_003965"
                     /EC_number="1.1.1.83"
                     /EC_number="1.1.1.85"
                     /EC_number="1.1.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional
                     D-malate/3-isopropylmalate/tartarate dehydrogenase"
                     /protein_id="HAY8829978.1"
                     /translation="MMKTMRIAAIPGDGIGKEVLPEGIRVLQAAAERWGFDLSFEQMG
                     WASCEYYSHHGKMMPDDWHEQLSRFDAIYFGAVGWPDTVPDHISLWGSLLKFRREFDQ
                     YVNLRPVRLFPGVPCPLAGKQPGDIDFYVVRENTEGEYSSLGGRVNEGTEHEVVIQES
                     VFTRRGVDRILRYAFELAQSRPRKTLTSATKSNGLAISMPYWDERVEAMAENYPEIRW
                     DKQHIDILCARFVMQPERFDVVVASNLFGDILSDLGPACTGTIGIAPSANLNPERTFP
                     SLFEPVHGSAPDIYGKNIANPIATIWAGAMMLDFLGNGDERFQQAHNGILAAIEEVIA
                     HGPKTPDMKGNATTPQVADAICKIILR"
     gene            1691..2614
                     /locus_tag="JNZ57_003966"
                     /pseudo
     CDS             1691..2614
                     /locus_tag="JNZ57_003966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310535.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
BASE COUNT          711 a          676 c          699 g          698 t
ORIGIN      
        1 tgtattccgg ttttccttcg ccaagacgaa tattgccgta tttactggtg gctaaataaa
       61 tcaccagtcc cattgccagc aaaaccaata cctgtacggc ggaacctaac gtacgcgtaa
      121 caaaagtgta tattgcgttg gccgcgtcgg ccgattgttg tgggaaaagg cttaatgcag
      181 ctgcgatgaa aagaatggcc accaggctga tgcttatcag cggcacatct tttttcttaa
      241 cattgctcat catgagtcat ctcctaggca taaaagcccg tctctggctt ttgccagttg
      301 taattatttg cagggtaatg agttgtatgt tgtgtttaac aaattgatta tttgaatatt
      361 acataaatta aacaattaag aatacggaaa gccataaaac acgaaacgga aacaataaaa
      421 ggtgaaatga cgcaggttat ttactgcaaa gaacgaataa aaaaacgcgt cagtgacgcg
      481 gttcaaataa actggtttga ccttaacgca aaataatttt gcaaatcgcg tcggcaacct
      541 gtggcgtggt ggcattgcct ttcatatcag gtgttttcgg cccgtgagca atcacttctt
      601 caattgctgc cagaataccg ttatgcgctt gctggaaacg ctcatcgcca ttgccgagaa
      661 aatcgagcat cattgccccg gcccaaatcg tggcgatagg gttagcaata tttttcccgt
      721 agatatccgg cgcggaaccg tggacaggct cgaagagcga cgggaaagtg cgttccggat
      781 tcaggttggc ggatggggca atgccaatgg tgccggtgca ggccgggcca agatcggaaa
      841 ggatatcgcc aaacaaattg gacgccacca ccacatcgaa gcgttccggc tgcatcacaa
      901 aacgcgcgca gagaatatca atatgctgct tgtcccagcg gatctccggg taattctcgg
      961 ccattgcttc cactcgctca tcccagtacg gcatgctgat ggctaaaccg ttcgatttag
     1021 tggcagaagt tagcgtctta cgtgggcggc tttgcgcaag ttcgaaggca taacgcaaaa
     1081 tgcgatcgac accacgacgt gtaaataccg attcctgaat gacgacttca tgctctgtac
     1141 cttcattcac tctaccgccg agcgaggaat attcgccttc ggtgttttcc ctgaccacgt
     1201 aaaaatcgat gtcgccaggc tgttttcccg ccagcgggca gggaacgcca ggaaagagac
     1261 gaaccgggcg caggttgacg tactggtcga attcacgacg aaatttcagc agcgaacccc
     1321 acaacgaaat atggtccgga acggtatccg gccagccgac ggcaccaaaa tagatggcgt
     1381 cgaaacggct aagttgctca tgccagtcgt ccggcatcat tttaccgtga tggctgtaat
     1441 actcgcagct cgcccacccc atttgctcaa aactcaagtc gaagccccag cgctcagcgg
     1501 cagcctgtaa cacgcgaatc ccttcaggaa ggacttcttt accaatcccg tctcccggga
     1561 tcgcagcaat acgcatcgtt ttcatcattg ggttctcact tcctgaccat caaaattgac
     1621 aacatcacca tcctataatt gacggaaaag gaattaatcc ccgtaactgg tgaaacataa
     1681 aacacgaatc atgaataatt taccgctgct gaatgatttg cgcgtcttta tgctggtggc
     1741 tcgtcgggct ggttttgccg ccgtggcgga agaactgggc gtttcaccgg cgttcgtcag
     1801 caagcgcatc gccttgctgg agcaaacgct aaacgtggtg ttgttacacc gcaccacccg
     1861 ccgcgtcacc attaccgaag aaggagagcg gatttatgaa tgggcgcagc ggattttgca
     1921 ggatgtcggt cagatgatgg acgaactttc tgacgtgcgt caggtgccac aggggatgct
     1981 gcgtattatc agcagctttg gttttggacg acaggtggtg gctccggcgt tatcagcgct
     2041 ggcgaaggcg tatccgcaac tggaattacg ttttgatgtg gaagaccggc tggtcgattt
     2101 ggtcaatgaa ggtgtcgatc tcgatattcg cattggcgat gacatcgccc ctaatttaat
     2161 cgcccgcaaa ctggcgacca attaccgcat tctctgcgcg tcgccggaat ttattgcgca
     2221 acatggcgcg ccgaaacatt taaccgatct ttctgcattg ccgtgcttgg tcattaaaga
     2281 gcgcgatcat ccttttggtg tctggcaatt acgcaataaa gaaggccacc atgcgattaa
     2341 agtcaccggc ccactgtcgt ctaatcatgg agaaattgtc catcagtggt gtctcgatgg
     2401 gcaggggatt gctctgcgtt cctagtggga tgttagcgaa aacattgcca gtggtcattt
     2461 agtgcaagtg ctaccggaat attaccagcc agcgaacgtc tgggccgttt atgtttcaag
     2521 gctggcgacg tcagcgaaag tgcggataac ggtagaattt ttacgccagt attttgccga
     2581 gcactacccg aatttttcac tggagcatgc ctgattaatg attcaattat cgggttgata
     2641 tcgggttaaa acctgatttt ctcctttcta agccgctaca gattggttag catattcacc
     2701 tttaatcgcg catgatcgaa agataattaa agaggttaat gtgttcgctg aatacggggt
     2761 tctgaattac tggacctatc tggt
//
LOCUS       DADMHC010000292         2767 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.295, whole genome shotgun sequence.
ACCESSION   DADMHC010000292 DADMHC010000000
VERSION     DADMHC010000292.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2767)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2767)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2767
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.295"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..237)
                     /locus_tag="JNZ57_003967"
     CDS             complement(<1..237)
                     /locus_tag="JNZ57_003967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000104949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY8829979.1"
                     /translation="MSTKLTGYVWDGCAASGMKLSSVAIMARLADFSNDEGVCWPSIE
                     TIARQIGAGMSTVRTAIARLEAEGWLTRKARRQGN"
     gene            complement(227..406)
                     /locus_tag="JNZ57_003968"
     CDS             complement(227..406)
                     /locus_tag="JNZ57_003968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003034732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4222 domain-containing protein"
                     /protein_id="HAY8829980.1"
                     /translation="MRQVNRWFKDHYGVPVRVIRWEPETQRVIYLRGGYEHECFSPLE
                     QFRRKFREIEVGHEH"
     gene            complement(582..1139)
                     /gene="ymfL"
                     /locus_tag="JNZ57_003969"
     CDS             complement(582..1139)
                     /gene="ymfL"
                     /locus_tag="JNZ57_003969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415665.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YmfL"
                     /protein_id="HAY8829981.1"
                     /translation="MGKHHWKIEKQPEWYVKAVRKTIAKLPGGYAEAADWLDVTENAL
                     FNHLRADGDQIFPLGWAMVLQRAGGTHFIADAVAQSANGVFVSLPDIEDVDNADINQR
                     LLEVIEQIGSYSKQIRSAIEDGVVEPHEKTAINDELYLSISKLQEHAALVYKIFCISE
                     SNDARECAAPGVVASIASGCGETNA"
     gene            complement(1183..1383)
                     /locus_tag="JNZ57_003970"
     CDS             complement(1183..1383)
                     /locus_tag="JNZ57_003970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415664.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY8829982.1"
                     /translation="MKAYWDSLTKEQQGELAGKVGSTQGYLRLVFNGYKKASFVLAKK
                     LEQCTSGAITKSDLRPDIYPKD"
     gene            1474..2148
                     /locus_tag="JNZ57_003971"
     CDS             1474..2148
                     /locus_tag="JNZ57_003971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
                     /protein_id="HAY8829983.1"
                     /translation="MKTIHDIRRSNARKLRDGVGGNSSFATMIDREPTQTSRFMGDGA
                     TKNIGDSMARHIEKCFDLPIGWLDQEHQTTNITKKPDVSITNKQITLVPVISWVQAGA
                     WKEVGYSEVDLSTAETYPCPVPCGEMTYILRVIGDSMIDEYRPGDMIFVDPEVPACHG
                     DDVIALMHDTGETTFKRLIEDGTQRYLKALHPNWPEPYIKINGNCSIIGTVIFSGKPR
                     RYKIKA"
BASE COUNT          783 a          660 c          584 g          740 t
ORIGIN      
        1 gttaccctgg cgacgcgcct tacgcgttaa ccagccttct gcttccagcc gtgcgatagc
       61 cgttctgacg gtactcatcc ccgcgccaat ctgacgggca atggtttcaa ttgatggcca
      121 gcacacacct tcgtcattac tgaaatcagc caggcgggcc ataattgcca cgctggataa
      181 cttcatgcct gatgcagcgc aaccatccca tacatagccg gttaatttag tgctcatgac
      241 cgacctctat ttccctgaat ttacgacgaa actgttcgag cggactgaag cattcatgct
      301 cataacctcc gcggaggtag ataacccgct gtgtttccgg ctcccaacga atgactctga
      361 cgggcactcc gtagtgatct ttgaaccagc ggttaacttg tcgcaaagga ctgtctcctt
      421 ctgccggttg aaatcaccca cagcccactc tgcaaagctg tgggttacaa tttccctgtc
      481 acctggtaca ttcactgcat agcaatattt caccttcgct tttccacccg gtacagaaag
      541 cgcaatcagt tgcgagcgac ggtagtgtgt tgttaaactg ttcatgcgtt agtttctcca
      601 caaccagaag caatcgacgc cacgacgccc ggagctgcac actcgcgggc gtcattactt
      661 tctgaaatgc aaaaaatttt gtagacaagt gctgcatgct cctgcagctt cgaaattgag
      721 agatacagct cgtcgttaat tgctgtcttc tcatgcggtt ccactacacc gtcttcgatt
      781 gctgaacgaa tctgttttga ataactgccg atctgttcaa tgacttccag cagacgctgg
      841 ttaatatcgg cgttgtccac atcctcgatg tcaggaagag acacaaagac gccatttgca
      901 gactgcgcca cagcatcagc aatgaagtga gtgccaccag cacgctgtaa aaccattgcc
      961 catcccagcg ggaaaatctg atcgccatct gcacgaaggt ggttgaataa agcgttttct
     1021 gttacatcga gccagtcagc cgcttcagcg taaccacccg gcaactttgc gatagttttt
     1081 ctgacagctt tcacgtacca ctcaggctgt ttttctattt tccagtgatg cttacccacg
     1141 attagcctca tcgttctgtg gttaaaaatt gaaagtgttc tgctaatctt tcggatagat
     1201 atccggtctt aagtcagatt tcgtaattgc acctgacgtg cattgctcaa gttttttagc
     1261 cagcacaaaa ctggcttttt tatagccatt gaaaaccagc cgtaagtagc cttgtgttga
     1321 gccaactttt ccggccaact caccctgctg ttctttggtt aaagagtccc aatacgcttt
     1381 catacaatat gtacctccag cgtacatatt acatgattga aatgaacctt cacgatactt
     1441 gtaccttagc ggtacaaggg ttttaatttc gttatgaaaa caatccatga catccggcgg
     1501 tctaacgcca gaaaactgag agatggtgtt ggcgggaatt cttcctttgc cactatgatt
     1561 gatcgcgagc caacccagac cagcaggttt atgggagatg gtgctactaa aaatatcggt
     1621 gacagcatgg cacgacacat tgaaaaatgt ttcgacctgc ctatcggatg gctcgatcaa
     1681 gaacaccaga caacgaacat cacaaaaaaa cctgatgttt caatcactaa caaacaaata
     1741 acgttagtcc ctgtcatatc atgggtacag gccggagcat ggaaagaagt tggctattct
     1801 gaggttgatt tgagcacagc agaaacttat ccctgccctg taccctgtgg cgaaatgact
     1861 tatatcttgc gggtgattgg tgattcaatg attgatgagt accgtccggg agacatgatt
     1921 tttgttgatc ctgaagtccc tgcttgccac ggtgacgacg ttattgcgtt gatgcacgat
     1981 acaggcgaaa ccaccttcaa gcgattgata gaagatggaa cacagcgtta tctcaaagca
     2041 ttacacccaa actggcctga gccctacatt aagattaacg gtaattgctc tataattggc
     2101 actgtgattt tctcgggaaa accaagaaga tacaaaataa aggcctaatc aatatttatg
     2161 aacctgcttc ggcaggtttt tttatacttg acaatgtacc ccatggacac acaatgtacc
     2221 aaaacgaaac aacaaacagg caggatgccc acgaagtagc cgcctggggc atatgaagtc
     2281 caagatgatt cgttagcaac aaaacgccca taggacgctt cgctctttaa caatttgaat
     2341 attttcagcg tcaatgatct gtttagctcc ctacaagtaa atgtagcgta gcaccatgat
     2401 aaatcctgct agtgtttagt taaaaatcgc gcgagagcaa gaacgatgtg agggcaggca
     2461 atactgatag tgttattgct attagtttat caaaaatatt tagacgaccc agatgaatat
     2521 ttttaataca tactccccct aatttaacag gagtaaatgt tgatgaataa cgagacatct
     2581 atactcaaca attgtatgat atgaacaatt atataacata atgtaggaaa aataaaaatg
     2641 gattggcatg accttatatc aaaggtaatt atcggacttg ttacaggctc aatcgcagct
     2701 tacttaactg cgcgatatgc actcggccgt tattataaag aaaaatggtg ggacaaaaga
     2761 atagatt
//
LOCUS       DADMHC010000293         2737 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.296, whole genome shotgun sequence.
ACCESSION   DADMHC010000293 DADMHC010000000
VERSION     DADMHC010000293.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2737)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2737)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2737
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.296"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            1..134
                     /locus_tag="JNZ57_003972"
                     /pseudo
     CDS             1..134
                     /locus_tag="JNZ57_003972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309413.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3440 domain-containing protein"
     gene            384..1250
                     /gene="ospB"
                     /locus_tag="JNZ57_003973"
     CDS             384..1250
                     /gene="ospB"
                     /locus_tag="JNZ57_003973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspB"
                     /protein_id="HAY8829984.1"
                     /translation="MNLDGVRPYCRIVNKKNESISDIAFAHIIKRVKNSSCTHPKAAL
                     VFLGEKGFCDSNDVLSIMGQQIPRVFKNKMLYDYVFKNEKSKNDFLKMAESWLPQSEP
                     IVINNDDDALNAAAYFSVKKAKIKTVNDTDFKEYNKVYILGHGSPGSHQLGLGSELID
                     VQTIISRMKDCGILNVKDIRFTSCGSADKVAPKNFNNAPAESLSCILNSLPFFKEKES
                     LLEQIKKHLENDESLSDGLKISGYHGYGVHYGQELFPYSHYRSTSIPADPEHTVKRSS
                     QKKTFIINKELD"
     gene            1579..2319
                     /locus_tag="JNZ57_003974"
     CDS             1579..2319
                     /locus_tag="JNZ57_003974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HAY8829985.1"
                     /translation="MKTKNFLLFCIATNMILIPSANALKAEGFLTQQTSPDSLSILPP
                     PPAEDSVVFQADKAHYEFGRSLRDANRVRLASEDAYYENFGLAFSDAYGMDISRENTP
                     ILYQLLTQVLQDSHDYAVRNAKEYYKRVRPFVIYKDATCTPDKDEKMAITGSYPSGHA
                     SFGWAVALILAEINPQRKAEILRRGYEFGESRVICGAHWQSDVEAGRLMGASVVAVLH
                     NTPEFTKSLSEAKKEFEELNTPTNELTP"
BASE COUNT          904 a          496 c          516 g          821 t
ORIGIN      
        1 cggtaagaga agttcatcat acttggcgca gttacgcgat gtttctgcta gaggtgatgc
       61 cgtaaagaac ggcagaacat taccggaaca agatagcggt ctacctgcac tggtatcaga
      121 cccggggctt ccccggatga tctccacggt actttaggta ctgtgtctat attatgtagg
      181 taggatcaat taactttgta gttgaaattc tttcattgaa ataatgaata aaaaagacaa
      241 accgcattaa acaatgccag aatataattg catttttgtt ccgttttttt aaatcatagt
      301 atacaaagaa gcttgcatac tatatgaaaa tataacaccc tttactatga tgtttataaa
      361 acaatatatg gagtcatgta ggtatgaatt tagatggtgt tagaccatac tgtagaatag
      421 tcaataaaaa gaatgaaagc atatcagata ttgcatttgc acatataata aaaagggtaa
      481 aaaattcatc atgtactcac ccaaaagcag cattggtttt tttaggagag aaaggttttt
      541 gtgatagcaa tgatgttcta tctattatgg gacaacaaat accaagagta tttaagaaca
      601 agatgttata tgattatgtt tttaaaaatg aaaaaagtaa aaatgatttt ctaaaaatgg
      661 ctgaatcatg gctaccacag agtgaaccaa tagtaataaa taatgatgat gacgcattga
      721 atgctgctgc ttatttttct gtaaaaaaag cgaaaataaa aacagtaaac gatactgatt
      781 ttaaagagta taataaggtt tatattcttg ggcacggtag tcctggttct catcaattag
      841 gccttggttc ggaacttatt gatgtacaaa caatcatttc aagaatgaaa gactgtggta
      901 ttctaaatgt gaaagatatc cgttttactt catgcggctc cgctgataaa gtggctccta
      961 aaaattttaa caatgcccct gctgaaagtc tttcttgtat ccttaactct ctgccttttt
     1021 ttaaggaaaa agaatctttg ctagagcaga taaaaaaaca ccttgaaaac gatgagtcat
     1081 tgagtgatgg tctaaaaata tccggctatc atggatatgg agttcactat ggtcaagagc
     1141 tttttcccta ctcacattat cgttcaactt caattcctgc tgatccggag catacagtaa
     1201 aaagaagctc tcagaaaaag acttttatta ttaataaaga actggattag tataaaattt
     1261 ttaacctata gttaattgtt tgcatttaag atgaagttat tttttcttta gtagaaaagt
     1321 gcttccctat gagggaaaat cacaaatcat cataatacag agacaaaacg atacgaacaa
     1381 atagataaaa aacatcattc ttttaccaca ttatttttcg tgaatatgaa aaataatgtt
     1441 attactttaa tataagacta ttttttgttt ttccatcact ctgttcaaat ttttccgcat
     1501 gacttgtgtt ttttgtaaca cagctcgttt tttacagctg accaaaatca tcaattaatt
     1561 atgctaagga aataaattat gaaaaccaaa aactttcttc ttttttgtat tgctacaaat
     1621 atgattttga tcccctcagc aaatgctctg aaggcagaag gttttctcac tcaacaaact
     1681 tcaccagaca gtttgtcaat acttccgccg cctccggcag aggattcagt agtatttcag
     1741 gctgacaaag ctcattatga attcggccgc tcgctccggg atgctaatcg tgtacgtctc
     1801 gctagcgaag atgcatacta cgagaatttt ggtcttgcat tttcagatgc ttatggcatg
     1861 gatatttcaa gggaaaatac cccaatctta tatcagttgt taacacaagt actacaggat
     1921 agccatgatt acgccgtgcg taacgccaaa gaatattata aaagagttcg tccattcgtt
     1981 atttataaag acgcaacctg tacacctgat aaagatgaga aaatggctat cactggctct
     2041 tatccctctg gtcatgcatc ctttggttgg gcagtagcac tgatacttgc ggagattaat
     2101 cctcaacgta aagcggaaat acttcgacgt ggatatgagt ttggagaaag tcgggtcatc
     2161 tgcggtgcgc attggcaaag cgatgtagag gctgggcgtt taatgggagc atcggttgtt
     2221 gcagtacttc ataatacacc tgaatttacc aaaagcctta gcgaagccaa aaaagagttt
     2281 gaagaattaa atactcctac caatgaactg accccataaa gctggacagc ctgtatcagg
     2341 ctatggaggg cccatagaca aatctaccct atatgagcat aggaggagtc tatgggcaca
     2401 ccacgtttta cccctgaatt taagggatta ctggaaaggc tgggacatat ccctccggca
     2461 gaagcagaaa aagcttatta tgctgccatc ggaaacgatg atctggcaac ctgagttcac
     2521 agataaaaca ttctctagga aactcggggc ggttccgttc accacatgca atgtggtgtt
     2581 gcaggggaac ggtctgcacc atcccctatg tcgatcaata taacagaaat gacaacttca
     2641 gattcagggc acaacctaaa tatattttag gtcacctctc aaatcgtttg cctgataccg
     2701 ctccattttt taataaaaaa atcaatcatt tttgaat
//
LOCUS       DADMHC010000294         2698 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.297, whole genome shotgun sequence.
ACCESSION   DADMHC010000294 DADMHC010000000
VERSION     DADMHC010000294.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2698)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2698)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2698
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.297"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..490
                     /locus_tag="JNZ57_003975"
     CDS             <1..490
                     /locus_tag="JNZ57_003975"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418493.1"
                     /note="Acs; catalyzes the conversion of acetate and CoA to
                     acetyl-CoA; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetyl-coenzyme A synthetase"
                     /protein_id="HAY8829986.1"
                     /translation="TFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIES
                     ALVAHPKIAEAAVVGIPHNIKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLAT
                     PDVLHWTDSLPKTRSGKIMRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEKQAIAM
                     PS"
     gene            690..1004
                     /locus_tag="JNZ57_003976"
     CDS             690..1004
                     /locus_tag="JNZ57_003976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF485 domain-containing protein"
                     /protein_id="HAY8829987.1"
                     /translation="MNGTIYQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLI
                     AFAPGWLGTPLNPNTSVTRGIPIGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQ
                     AS"
     gene            1001..2650
                     /gene="actP"
                     /locus_tag="JNZ57_003977"
     CDS             1001..2650
                     /gene="actP"
                     /locus_tag="JNZ57_003977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation/acetate symporter ActP"
                     /protein_id="HAY8829988.1"
                     /translation="MKRVLTALAATLPFAANAADAISGAVERQPTNWQAIIMFLIFVV
                     FTLGITYWASKRVRSRSDYYTAGGNITGFQNGLAIAGDYMSAASFLGISALVFTSGYD
                     GLIYSLGFLVGWPIILFLIAERLRNLGRYTFADVASYRLKQGPIRILSACGSLVVVAL
                     YLIAQMVGAGKLIELLFGLNYHIAVVLVGVLMMMYVLFGGMLATTWVQIIKAVLLLFG
                     ASFMAFMVMKHVGFSFNNLFSEAMAVHPKGVDIMKPGGLVKDPISALSLGLGLMFGTA
                     GLPHILMRFFTVSDAREARKSVFYATGFMGYFYILTFIIGFGAIMLVGANPEYKDAAG
                     HLIGGNNMAAVHLANAVGGNLFLGFISAVAFATILAVVAGLTLAGASAVSHDLFANVF
                     KKGATEREELRVSKITVLILGVIAIILGVLFENQNIAFMVGLAFAIAASCNFPIILLS
                     MYWSKLTTRGTMLGGWLGLITAVVLMILGPTIWVQILGHEKAIFPYEYPALFSISVAF
                     LGIWFFSATDNSAEGARERELFRAQFIRSQTGFGVEQGRAH"
BASE COUNT          540 a          721 c          761 g          676 t
ORIGIN      
        1 caccttcaaa aatatgtatt tcagcggcga cggcgcgcgt cgcgatgaag atggctatta
       61 ctggatcacc gggcgtgtgg acgacgtgct gaacgtctcc ggtcaccgtc tggggacggc
      121 agagattgag tcggcgctgg tagcgcatcc gaagattgcc gaagccgccg tagtaggtat
      181 tccgcacaat attaaaggtc aggcgatcta cgcctacgtc acgcttaatc acggggagga
      241 accgtcacca gaactgtacg cagaagtccg caactgggtg cgtaaagaga ttggcccgct
      301 ggcgacgcca gacgtgctgc actggaccga ctccctgcct aaaacccgct ccggcaaaat
      361 tatgcgccgt attctgcgca aaattgcggc gggcgatacc agcaacctgg gcgatacctc
      421 gacgcttgcc gatcctggcg tagtcgagaa gctgcttgaa gagaagcagg ctatcgcgat
      481 gccatcgtaa cccacaattg ccggatgcga gtcggtaacg gtttgtaggc ctgataagac
      541 gcgacagcgt cgcatcaggc attgattgcc ggatgcggcg taaacgcctt atccggccta
      601 cattcggcaa gggttacccg agcgttaacc ttctcccata agggagcggg aattaaaaca
      661 atccctacat tacctctgga gaatctgtga tgaatggcac tatttatcag cggatagaag
      721 acaatgcgca tttcagggag ttagtcgaaa aacggcaacg gtttgccacc atcctgtcga
      781 ttattatgct ggcagtttat atcggcttta ttttactgat cgccttcgcg cccggctggc
      841 tgggcacgcc gctgaatccg aacaccagcg tcacacgcgg tattccaatt ggtgttggag
      901 tgattgtgat ctcctttgtt ctcaccggta tctacatctg gcgggcgaac ggcgaattcg
      961 accgtcttaa taatgaagtc ctgcatgagg tacaagcatc atgaaaagag ttctgacggc
     1021 gcttgccgcc acactccctt tcgcagctaa cgccgcggat gctattagcg gggccgtaga
     1081 gcgccagcca acgaactggc aggcgattat tatgttcctg attttcgtcg tgtttacgct
     1141 cggcattacc tactgggcat caaaacgcgt acgttctcgt agcgactact acacggcagg
     1201 cggcaatatc acaggcttcc agaacgggct ggcgattgcc ggtgactata tgtccgccgc
     1261 ctcatttttg gggatctccg cgctggtgtt tacctccggc tatgacggct taatttactc
     1321 gctgggcttc ctggtgggct ggccgatcat tttgttcctg attgccgaac gtctgcgtaa
     1381 cctgggacgc tacacctttg ccgatgtagc ctcttaccgc ctgaaacaag ggccgattcg
     1441 tattctttcg gcctgtggtt ctctggtggt ggtggcgctt taccttatcg cccagatggt
     1501 aggcgcaggt aaactgatcg agctgctgtt tggccttaac tatcacattg cggtggtgct
     1561 ggtcggcgtg ctgatgatga tgtacgtcct gttcggcggc atgctggcga ccacctgggt
     1621 gcaaattatt aaagccgtgc tgttgctgtt cggtgccagc tttatggcct ttatggtgat
     1681 gaaacacgtc ggctttagct tcaataatct gttcagcgaa gcgatggcgg tacacccgaa
     1741 aggtgtcgac atcatgaagc cgggcgggct ggtgaaagat ccgatctccg cgctctctct
     1801 gggtctggga ctgatgtttg gtacggcggg cttgccgcac attctgatgc gcttctttac
     1861 agtcagcgat gcccgcgaag cacgtaagag cgtgttctac gccaccgggt ttatgggcta
     1921 cttctatatt ctgaccttta ttatcggctt cggcgcgatc atgctggttg gtgcgaatcc
     1981 ggaatataaa gacgcggcgg gccatctgat tggtggtaac aacatggcgg ccgttcacct
     2041 ggcgaatgca gtgggcggca acctgttcct cggttttatt tcagcggttg ctttcgccac
     2101 tatcctcgcg gtggttgcgg gtctgacgct ggcgggcgca tccgcggttt cgcatgactt
     2161 gttcgctaac gtcttcaaaa aaggtgcgac cgaacgtgaa gaactgcggg tatcgaaaat
     2221 caccgtcctg attttgggtg tgattgcgat tatcctcggc gtgctgtttg agaatcagaa
     2281 catcgccttt atggtaggcc ttgcgtttgc catcgcggcg agctgtaact tcccgatcat
     2341 tctgctttcc atgtactggt cgaaactgac tacccgtggc acgatgctgg gcggctggct
     2401 ggggctgatt accgcagtgg tgctgatgat cctcggccca actatttggg tacagatcct
     2461 cggtcacgaa aaagccatct tcccgtatga atacccggcg ctgttctcta tcagcgtggc
     2521 attcctcggc atctggttct tctcggcaac cgataactca gcggaaggtg cgcgcgagcg
     2581 tgaactgttc cgtgcgcagt ttatccgctc ccagaccggc tttggcgttg agcaaggccg
     2641 cgcacattaa tctctcccct tccccggtcg cctgaccggg gaatactctt cctctcca
//
LOCUS       DADMHC010000295         2645 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.298, whole genome shotgun sequence.
ACCESSION   DADMHC010000295 DADMHC010000000
VERSION     DADMHC010000295.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2645)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2645)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2645
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.298"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(264..1607)
                     /gene="gdhA"
                     /locus_tag="JNZ57_003978"
     CDS             complement(264..1607)
                     /gene="gdhA"
                     /locus_tag="JNZ57_003978"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013366584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HAY8829989.1"
                     /translation="MDQTYSLESFLNHVQKRDPNQTEFAQAVREVMTTLWPFLEQNPK
                     YRQMSLLERLVEPERVIQFRVVWVDDRNQVQVNRAWRVQFSSAIGPYKGGMRFHPSVN
                     LSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSESEVMRFCQALMTELYRHLGA
                     DTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYF
                     TEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTK
                     EKLARLIEIKASRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQNELDVDAAHQ
                     LIANGVKAVAEGANMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLEMAQNAARLG
                     WKAEKVDARLHHIMLDIHHACVEHGGEGEQTNYVQGANIAGFVKVADAMLAQGVI"
     gene            1843..2115
                     /locus_tag="JNZ57_003979"
     CDS             1843..2115
                     /locus_tag="JNZ57_003979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnjH family protein"
                     /protein_id="HAY8829990.1"
                     /translation="MSRALFAVVLAFPLIALANPHYRPDVEVNVPPEVFSSGGQSAQP
                     CTQCCVYQDQNYSEGAVIKAEGILLQCQRDDKTLSTNPLLWRRVKP"
     gene            complement(2081..2488)
                     /gene="nudG"
                     /locus_tag="JNZ57_003980"
                     /pseudo
     CDS             complement(2081..2488)
                     /gene="nudG"
                     /locus_tag="JNZ57_003980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707356.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CTP pyrophosphohydrolase"
BASE COUNT          658 a          697 c          645 g          645 t
ORIGIN      
        1 atctgctgct atcgcagaaa gttaacggat gctgaacttg aagcgtgtta tcgttacgac
       61 aagcagtttt gggagcacta cagtaagaaa tgccgttggc ccataagaaa tgttccctgg
      121 ggagcatcat ccgttaaata ctcataaacg cctgaaattt tgccgggggc gctgcgcttg
      181 cccggcctac attagagcgt aactgcaatg aattgtgccc atttgtaggc ctgataagcg
      241 tagcgccatc aggcatttac aacttaaatc acaccctgcg ccagcatcgc atcggcaacc
      301 ttcacaaaac cggcaatgtt cgcgccctgc acgtagttgg tttgctcacc ttcaccacca
      361 tgctcaacac aggcatggtg gatatccagc atgatgtgat gcaaacgtgc gtcaactttc
      421 tcggctttcc agcccaggcg cgcagcgttt tgcgccattt caaggcctga cgttgctaca
      481 ccgccagcat tagccgcttt acccggtgca aacagtacgc ctgcctgctg gaacagttca
      541 gtcgcttcga tggtggtcgg catatttgcc ccttcggcga cggctttaac gccattggcg
      601 ataagctgat gcgcggcgtc aacatccagt tcgttctggg tggcgcaagg cagggcgata
      661 tcaaccggta cagaccacgg ctgttggcct tcgagataga ccagaccaaa ttctttggcg
      721 taatctgcca ctcgaccatc gcggctggct ttgatttcga taagacgtgc cagtttctct
      781 ttcgtgaatc cgctttcatc aactacagtg ccgctggagt ctgacgcagt gatcacacga
      841 gcaccaaatt ccatcgcttt ttcgatagcg tactgggcga cgttgccgga gccagaaacg
      901 gaaacgcgca tcccttcaaa acccataccg tggcgtttta acattgcttc tgtgaaataa
      961 accagaccgt agccggtagc ttccgggcga ataagactac cgccaaatga aaggccctta
     1021 ccggtgaaga cgcaggcggt attgttggag agctttttca tcatccccgc cataaagccg
     1081 acttcacgac caccaacgcc gatatcacct gccggaacgt cggtatccgc gcccagatga
     1141 cgataaagct cggtcatcag cgcctggcag aaacgcatca cttcgctttc gcttttacct
     1201 ttcgggtcaa aatcgctacc gcctttacca ccgcccatcg gcagggtagt cagggcattt
     1261 ttgaaggttt gttcgaagcc gaggaatttg agaatggaga ggttaactga cggatggaag
     1321 cgcataccgc ctttgtacgg gccgatggct gagctgaact gcacacgcca tgcacggttg
     1381 acctgtacct ggttgcgatc atcaacccat accacgcgaa actggatcac gcgctccggt
     1441 tcaaccagac gctccagtaa tgacatctgg cgatattttg gattttgttc aagaaaaggc
     1501 cagagtgtgg tcattacttc acgaacggct tgcgcgaact cggtttgatt cgggtcgcgc
     1561 ttttggacat ggttgaggaa tgactccaga gaatatgtct gatccataga tataaaaccc
     1621 ttatatatta atacgattgt gcttatgttg tttatgtcat gtgcttttgc agttttcgac
     1681 tataccatca agaatgtgac ggtaagcaag aaaaaaatga cccaggaaag caaattaata
     1741 acgagagtaa tctcataacc aaatgcgata actcagacgc taaagttttg ccacccggct
     1801 accgttatca gttgcagaga caataacgtt aaggagttcc ctgtgagtcg agcattgttc
     1861 gccgtagtat tagcatttcc attaattgca ctggctaacc cgcattatcg tccggacgtg
     1921 gaggtaaacg taccgccaga agtgttcagt tcaggcgggc agtcagcgca gccctgtact
     1981 cagtgctgcg tttatcagga tcaaaattat tctgaagggg cggtaattaa agccgaagga
     2041 atactgctgc aatgccagcg ggatgacaaa acccttagca ctaatccgct gctctggcgg
     2101 cgcgtaaagc cataaacgcc tctaatagtg gaatgtcagt aggggccagc ggatattgca
     2161 gcgcctcttc aggtgagcac cagaccagcg cctgatgttc atgtgcctgt aacgtcccgt
     2221 ggaagtcggg tacgtgccag gcatgaagat ggataatccg gcccgaaact tctcgctgat
     2281 ggctggcaac atactcaccc acagttgctt cgatgcccaa ttcttcgttt aactcacgca
     2341 ccagtgcctg ctgctagctt tcatccagct cgactttacc accggcaaac tcccataatc
     2401 ccgcctgatc gctctgggcg gggcgttgcg cgagtaaaat tttgccatca cgttcaatga
     2461 tggcggcaac aacttcaatc attttcataa attacacacg ggcagataag cgaaaaatgc
     2521 cataatatcc gcactgttgc tcaatcagaa aggctttata tttaaggagt gcctgtgcta
     2581 gaccgccatc ttcatccccg gattaaaccg ttgttgcatc agtgcgtgcg ggttcttgat
     2641 aaacc
//
LOCUS       DADMHC010000296         2635 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.299, whole genome shotgun sequence.
ACCESSION   DADMHC010000296 DADMHC010000000
VERSION     DADMHC010000296.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2635)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2635)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2635
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.299"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            88..2604
                     /locus_tag="JNZ57_003981"
                     /pseudo
     CDS             88..2604
                     /locus_tag="JNZ57_003981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312049.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
BASE COUNT          754 a          640 c          604 g          637 t
ORIGIN      
        1 ggctgcaatc aatgattatg gcggcagttc cgggacagaa actcgtccac tgcaataaca
       61 aatataaaaa acacaggtca tcagggaatg ccacaacgac accaccaggg acataaacgc
      121 acaccgaaac agttggcgct catcatcaaa cgctgtttgc cgatggtgct cactggcagc
      181 ggcatgcttt gcactaccgc taacgccgaa gagtattatt tcgaccccat tatgctggaa
      241 actacaaaaa gtggtatgca aacaactgat ctgtcacgtt tttcaaaaaa atacgcacaa
      301 ctaccaggaa cttatcaggt tgatatctgg ctgaataaaa agaaggtttc acagaaaaaa
      361 attacattta ccgccaatgc agagcaactt ctgcagccac agtttacggt agaacaacta
      421 cgtgagctgg gtattaaggt ggatgaaatc ccggcgctgg ctgaaaaaga tgacgatagc
      481 gtgatcaact cgcttgaaca aatcattccc ggtacagctg ctgaatttga tttcaatcat
      541 cagcgactta atttgagcat tccccaaatt gcactgtacc gtgatgcaag aggttacgtc
      601 tccccttctc gttgggacga tggtatacca acgctgttta ccaactactc gtttacaggt
      661 tctgataacc gttaccgcca gggcaatcgt agccaacgac agtacctgaa tatgcaaaat
      721 ggtgctaatt ttggccccta gcgattacgt aactattcta cgtggacacg caacgatcag
      781 gcgtcaagct ggaacactat cagtagttat ttacaacgtg atatcaaggc gttgaagtct
      841 cagttgcttc tgggagaaag cgccaccagc ggcagtattt tttccagcta cacctttact
      901 ggcgtgcaac tcgcttccga cgataatatg ttgccaaaca gccagcgcgg atttgcccca
      961 acggtacgcg gtatcgcaaa cagtagtgca atcgtgacta tcaggcaaaa tggttatgtg
     1021 atctatcaaa gcaacgtgcc agcgggtgcc tttgaaatta acgatctcta cccctcttcc
     1081 aacagcggcg atttagaagt cacgattgaa gaaagtgacg gtacacaacg tcgctttatc
     1141 cagccttatt cttcattacc catgatgcag cgacctgggc atctaaaata tagcgcgacc
     1201 gctggacgct atcgcgctga tgcaaacagt gatagcaagg aacccgaatt tgctgaagcc
     1261 acggcaatat atggtttgaa taatactttt acgctgtatg gcggcctgct cggttctgaa
     1321 gattattatg cgctggggat cggtatcggc ggcacacttg gcgcactggg cgcgttgtcg
     1381 atggatatca acagagctga cacccaattc gataaccagc actcttttca tggctatcaa
     1441 tggcgtacgc agtacatcaa agatatcccg gaaaccaaca ccaatatcgc tgttagctac
     1501 tatcgctata ccaacgatgg ctattttagt tttgatgaag ccaatacccg caattgggac
     1561 tataacagtc gccaaaaaag tgaaattcaa ttcaacatca gccagacaat atttgatggg
     1621 gtaagtctgt atgcctccgg ttcgcagcaa gactattggg gcaataacga gaaaaacagg
     1681 aatatctctg ttggggtttc cggccagcaa tggggaattg gttacagcct gaattatcaa
     1741 tacagccgct acactgatga aaataatgac cgtgcactct ctttgaatct cagtattccg
     1801 ttagaacgct ggttaccgcg tagccgggtt tcctatcaga tgaccagcca gaaagatcgc
     1861 ccaacccaac atgaaatgcg tcttgatggc tcactgctgg atgatggtcg cctgagctat
     1921 agcctggaac aaagtctgga tgacgataac aaccataaca gtagcctgaa cgccagttac
     1981 cgttcacctt atggaacctt cagtgccgga tacagttacg gtaatgacag cagccaatac
     2041 aattacggcg ttaccggcgg cgtggttatc catcctcatg gcgtgacgct ctcgcaatat
     2101 ctgggcaacg cttttgcgct tatcgatgct aacggggctt ctggcgtgag gatacaaaac
     2161 tatccgggga ttgctactga tccctttggc tatgcagtga ttccttatct cacgacttat
     2221 caggaaaacc gtctctcggt agatactacg cagctgcccg ataacgtcga tcttgaacaa
     2281 acaacacagt ttgtggtgcc caacagaggt gcaatggtag cggcgcgttt caacgccaat
     2341 atcggttatc gcgtacttgt tacagtcagc gatcgcaacg gtaaaccgtt gccctttggc
     2401 gctcttgcca gcaacgatga tacggggcaa caaagtatcg tcgatgaggg cggcatacta
     2461 tatctctctg ggatatcgag taaatcacaa agctggactg tacgctgggg aaatcaggca
     2521 gatcaacaat gtcagtttgc ttttagtaca ccggattcag aaccaacaac ctctgtatta
     2581 caaggcacag cgcagtgcca ttaaggataa aaaaatgaaa agagcgcctc ttata
//
LOCUS       DADMHC010000297         2590 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.300, whole genome shotgun sequence.
ACCESSION   DADMHC010000297 DADMHC010000000
VERSION     DADMHC010000297.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2590
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.300"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            97..717
                     /locus_tag="JNZ57_003982"
     CDS             97..717
                     /locus_tag="JNZ57_003982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HAY8829991.1"
                     /translation="MSSASAEDLTLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQ
                     YREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLT
                     SPAMNETHDFSYRSVILTLSERKVLRLLGKGWGINQIVSLLKKSNKTISAQKNSAMRR
                     LAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSHS"
     gene            675..1351
                     /gene="bglJ"
                     /locus_tag="JNZ57_003983"
                     /pseudo
     CDS             675..1351
                     /gene="bglJ"
                     /locus_tag="JNZ57_003983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418786.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator BglJ"
     gene            complement(1389..2177)
                     /gene="fhuF"
                     /locus_tag="JNZ57_003984"
     CDS             complement(1389..2177)
                     /gene="fhuF"
                     /locus_tag="JNZ57_003984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore-iron reductase FhuF"
                     /protein_id="HAY8829992.1"
                     /translation="MAYRSAPLYEDIIWRTHLQPQDAGLAQAVRATIAKHREHLLEFI
                     RLDEPAPLNAMTLAQWSSPNALSSLLAVYSDHIYRNQPTMIRENKPLISLWAQWYIGL
                     MVPPLMLALLTQEKALDVSPEHFHAEFHETGRVACFWVDVCEDKNATPHSPQQRMETL
                     ISQALVPVVQALEATGEINGKLIWSNTGYLINWYLTEMKQLLGEVTVESLRHALFFEK
                     TLTNGEDNPLWRTVVLRDGLLVRRTCCQRYRLPDVQQCGDCTLK"
     gene            2318..2554
                     /locus_tag="JNZ57_003985"
     CDS             2318..2554
                     /locus_tag="JNZ57_003985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313355.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1435 domain-containing protein"
                     /protein_id="HAY8829993.1"
                     /translation="MLQRTLGSGWGVLLPGLLIAGLMYADLSPDQWRIVILMGLVLTP
                     VMLYHKQLRHYVLLPSCLALIAAIMLMIMNLNQG"
BASE COUNT          679 a          566 c          657 g          688 t
ORIGIN      
        1 ggatgctgca aaaatggaat tgttatcagt aaaatacctg ttatgcaagc agggttaaaa
       61 gaggtcatga ggactcactt ccctgaatat gaaataatat ccagcgcctc tgcggaggac
      121 cttaccttat tacaattacg tcgttccgga ttagtcattg ctgatttagc cggtgaaagt
      181 gaagatccac gttctgtttg tgaacattat tattctttaa tctcacaata tcgggaaatt
      241 cactgggttt tcatggtgtc acgctcctgg tattcccagg cagtagaatt gctcatgtgc
      301 cctacggcga cgttattgtc tgatgttgaa cccattgaga atctggtcaa gaccgtacgt
      361 tccggcaata cgcacgcaga gcgtatcagc gccatgctga cctctccggc aatgaatgaa
      421 actcatgatt ttagctatcg ctccgtcatt ctcactcttt cagagcgcaa ggtactgcgg
      481 ctattaggta aaggatgggg catcaaccag atagtttcgt tgcttaagaa aagtaataaa
      541 actatcagcg cccaaaaaaa cagtgcgatg cgtcgactgg caattcacag caacgctgaa
      601 atgtatgcat ggataaatag cgcgcagggt gcaagagaac ttaacttgcc ttctgtttat
      661 ggagatgccg cagaatggaa cacagccgaa ttaagaagag aaatgtcgca ctcatagaaa
      721 aatgcgtcat gagcagtatc ggtattgaga gtttattcag aaagtttgcg ggtaaccctt
      781 ataagctcca tacctatacc agtcaggagt catttcagga tgccatgtcg cggatctcat
      841 ttgcggcggt catttttctt tttctgccat gagaagtgag cgcagagagg gattatcttg
      901 cctgactgaa ctggcgatta agtttccgcg tacccggcgt ttagttattg cggatgatga
      961 tattgaagct cggctgattg gttcattgtc gccatcaccg ctggacggtg tattaagtaa
     1021 agcgtcaacg ctggagattt ttcatcagga actctttttg tcattaaatg gtgtacgtca
     1081 ggcgaccgac cgactgaaca atcagtggta cattaaccaa agccggacgc taagcccgac
     1141 ggagagagaa atattgcgct ttatgtcgcg tggctactca atgacacaaa ttgccgagca
     1201 gcttaaacgc aatatcaaaa cgatccgtgc acataaattt aatgtgatgt cgaaactggg
     1261 cgtcagttct gatgcagggt tgttggaggc cgcagatatt ctgttatgta tgcggcattg
     1321 cgaagcaagt aatgtgttgc atccctatta atcctcatga tgccgggttt acttccccgg
     1381 cagtgctttc atttcagcgt acaatcgcca cattgctgca catccggtaa gcgataacgc
     1441 tggcagcagg ttcggcgcac cagcaggcca tcgcgcagca cgacggtacg ccagagtgga
     1501 ttatcttcac cgttcgtgag cgttttctca aaaaagaggg catggcgcag cgattcaacc
     1561 gtcacctcgc cgagcagttg cttcatctca gtgagatacc agttgatcaa ataaccggta
     1621 ttactccaga taagtttgcc gttgatctct ccggtcgctt ctagtgcctg cacaaccgga
     1681 accagcgcct ggctgattaa cgtttccatt cgctgctgcg gcgaatgtgg tgttgcgttt
     1741 ttatcttcac acacatcgac ccagaaacag gcgacgcgtc cggtttcgtg aaactcagca
     1801 tggaaatgtt ccggcgacac atctaatgcc ttttcctgcg tcagtagcgc cagcattaat
     1861 ggtggcacca tcaggccgat ataccattgt gcccatagtg agatcagcgg tttgttctcg
     1921 cggatcatcg ttggttggtt gcgatagata tgatcggaat agaccgcgag tagagaactt
     1981 agcgcattcg gtgatgacca ttgcgccagc gtcatggcgt taagcggagc gggttcatcc
     2041 aggcggataa actcgagcaa atgttcacga tgtttggcga tcgtcgcacg tacggcttgt
     2101 gcaagcccag catcctgcgg ctggagatgc gttcgccaga tgatatcttc atagagcggt
     2161 gcggaacgat aggccataat cgggatagta atctaaatga taatgattgc taatcctagc
     2221 gataggttta cccgatagca agggatttct ctggcttgaa aatgataaaa attatcatat
     2281 gatattagtt atcattatca atgaaagaga tgaaaccatg ttgcaacgta cgctgggcag
     2341 tggctgggga gtgttgctgc cgggattgct gattgcaggg ctgatgtatg cggatttatc
     2401 gccggatcag tggcggattg tcattctgat gggattagta ttgacgccgg tgatgctgta
     2461 tcacaaacag ttacggcatt acgttttgct accatcgtgc ctggcgctta ttgctgccat
     2521 catgctgatg ataatgaatt tgaatcaggg atgaaaaatc aaggaagaaa caagaaagga
     2581 agtaaagata
//
LOCUS       DADMHC010000298         2588 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.301, whole genome shotgun sequence.
ACCESSION   DADMHC010000298 DADMHC010000000
VERSION     DADMHC010000298.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2588)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2588)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2588
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.301"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(11..322)
                     /locus_tag="JNZ57_003986"
     CDS             complement(11..322)
                     /locus_tag="JNZ57_003986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706349.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HAY8829994.1"
                     /translation="MEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGG
                     VLKRLPEGSTLPWHRVVNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQRYRWN
                     Y"
     gene            485..581
                     /gene="ffs"
                     /locus_tag="JNZ57_003987"
     ncRNA           485..581
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="JNZ57_003987"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            701..1054
                     /locus_tag="JNZ57_003988"
     CDS             701..1054
                     /locus_tag="JNZ57_003988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1428 domain-containing protein"
                     /protein_id="HAY8829995.1"
                     /translation="MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWAS
                     DVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFD
                     GKRMIYGGFESIIDE"
     gene            complement(1096..>2588)
                     /gene="pdeB"
                     /locus_tag="JNZ57_003989"
     CDS             complement(1096..>2588)
                     /gene="pdeB"
                     /locus_tag="JNZ57_003989"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308537.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase
                     PdeB"
                     /protein_id="HAY8829996.1"
                     /translation="PVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQ
                     ELERWQGAACSEAHLMEMRRVSYSYRYIQEVVYIDNNIPQCSSLEHESPPDTFPEPGK
                     ISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA
                     HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPFPEMNISIITWASTKMLQKG
                     WHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLAN
                     GKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP
                     QQHISINLESTVLTSEKIPQLLREMINHYQVNPRQIALELTEREFADPKTSAPIISRY
                     REAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKL
                     KMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL"
BASE COUNT          632 a          640 c          665 g          651 t
ORIGIN      
        1 ccggagaggg ttagtagttc cagcgataac gctgcaagtc gatttgcccg cttcccgata
       61 ccatcacacc ttctgccagt aatgcctgtc gctgacgctg taaatccggt ccggttagcg
      121 aaattgtgcc gtggcgatta accacccggt gccagggtaa ggtgctgcct tcagggagac
      181 gctttaacac accgcccacc tggcgcgcgg cgcggggcga tcccgccagt ttcgccacat
      241 caccgtaagt ggtgacatag ccttcgggaa tagcggcgac gatttgccag acgcgttggg
      301 gaaatgaatc ttctttttcc atcttttctt cctgaggtaa tttttcagca taatctggaa
      361 aaacgcccga gtgaagtcgc attgcgcaag aaaccagcat ctggcacgcg atgggttgca
      421 attagccggg gcagcagtga taatgcgcct gcgcgttggt tctcaacgct ctcaatgggg
      481 gctctgttgg ttctcccgca acgctactct gtttaccagg tcaggtccgg aaggaagcag
      541 ccaaggcaga tgacgcgtgt gccgggatgt agctggcagg gcccccaccc atttctgcct
      601 cccaccgttt cgtcaaaaaa aaccaacatg gctaaacttt aaccacaact gacgtcgcaa
      661 gaattgtctg gctgcgcagt acgcttcgga ggtatgtctg atgaagtatg ttgatggttt
      721 tgtggttgcc gttcctgccg ataaaaagga tgcctatcgg gaaatggccg ctaaggctgc
      781 gccattgttt aaagagtttg gcgcgcttcg tattgtcgaa tgctgggcca gcgatgtacc
      841 ggatggcaaa gtgaccgatt ttcgtatggc ggtgaaagcg gaagagaatg aagaggttgt
      901 ctttagctgg attgaatacc cttcaaaaga ggtccgcgac gctgctaatc aaaagatgat
      961 gtcggaccca cggatgaaag agttcggcga gtccatgccg tttgacggca agcgaatgat
     1021 ctatggcgga ttcgagtcaa tcatcgacga ataggtagcg tgacgggctg tgcggcgtgc
     1081 cgtcagccca aaaattcaca aatgttgctc ggcccagcgt aagaaatctt ctttcggtaa
     1141 tgccttgctg tagagccagc cctgaccgta gtgcacgcca tgctggcgta gccactcttc
     1201 ttgtttactg gtttcgattc cctccgctac cattttcagt ttcagtgttt ttgccatttc
     1261 gatgatatgc ggcgtgacat ttttatattc cagcgcatca acgaaagatt tatcgatctt
     1321 cagaatgtcg acatccagat cctgtaaata acttaaactt gaatatcccg taccaaaatc
     1381 atcaagataa atttcatggc ccgcctcccg gtagcgagaa attatcgggg cgctggtttt
     1441 cggatcggca aactcgcgtt cagtgagttc aagcgcgatc tgtctgggat taacctgata
     1501 gtgattgatc atttcacgca gcaattgcgg gattttttcc gaggtgagca cggtggattc
     1561 aagattgatc gaaatatgct gctgtggatg ctgacgcagc cagtcgccca tatcttcaaa
     1621 gacgcttctt ataatcagta gcgtcaatgg ctcagaaagg cctgtttgct gtgccagcgg
     1681 aataaaacta tctggtgaca accaactacc gtctgtctgc ggccagcgcg ccagtgcctc
     1741 agcaccgaca attttgccat tggctaagga gacaatcggc tgatagtgca cgcaaatatc
     1801 acgattttcg atagcatcct gcagccgatg atgcggtgac tggatacggc gcaaaatacg
     1861 cagcacaaac atcgctgcca gcaggccaat caccaacccg agcggtaacc aaataaagac
     1921 ttgccgatgc cagcctttct gcaacatttt cgttgaagcc caggtgatga tcgaaatatt
     1981 catctccggg aagggcagga tatcgtaaat gattccatta ttttcgatat gctcaccggg
     2041 tgttttttgt agcctggtaa taattccctg agcaatttca tcgctgctgg ttatgacaac
     2101 gttatgggca ttgccaataa tggcggcatc aatttgccat gagctatagg gaatgacatc
     2161 aataaaggaa gcggggtcga tcatgacgac ataatgtgcc gttcccatgg cgaccatgta
     2221 acggataatg cctaaatcgt tatgcgatgt taaccagaca cgataaccat ctttcgaaat
     2281 tttacctggc tcggggaagg tatcgggcgg actttcatgc tccagagacg aacactgggg
     2341 aatgttgtta tcgatataaa ccacttcctg aatatagcga taactgtaag atacccgacg
     2401 catttccatg agatgggctt cgctacaggc agcgccttgc catctttcca gctcttgcag
     2461 cgcatctttc ccttgtgtcg ccaccttatt ggcccgaata gcgacgcggg aggaataggt
     2521 atccagctct tcaataaacg atgtttctac ctgctgatgg gccagccaga tgcttaagcc
     2581 gacaggca
//
LOCUS       DADMHC010000299         2581 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.302, whole genome shotgun sequence.
ACCESSION   DADMHC010000299 DADMHC010000000
VERSION     DADMHC010000299.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2581
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.302"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            327..648
                     /locus_tag="JNZ57_003990"
                     /pseudo
     CDS             327..648
                     /locus_tag="JNZ57_003990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001232281.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(682..888)
                     /locus_tag="JNZ57_003991"
     CDS             complement(682..888)
                     /locus_tag="JNZ57_003991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001570270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829997.1"
                     /translation="MTVSYKITYEHRDGDQIRMEEVLFHSEHEPTKDEIHDAVRKDTV
                     RFNSPSNGVTAVSGFKVISVVPVP"
     gene            complement(1851..2576)
                     /locus_tag="JNZ57_003992"
     CDS             complement(1851..2576)
                     /locus_tag="JNZ57_003992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001433554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8829998.1"
                     /translation="MLVPVRGGKRPEVVTAPSGTEITVEPIEQAILVSHQTKLWDQKS
                     TTGFTQGTLQQDALNICDNVVRTINSKMVDVLESSKLLKTVELPALTGSLTAKADAIM
                     DALYENTESSFGSEVSDYGIIAHESHLKALSRLAAKQGFGGEDAIVDMLGTDIAYYNG
                     EDRGVFMMAKRFTALSFGCFRHDGENVTVVLSHDGDSQSHDLEILGKVFVVAEAATTI
                     KMGTGSATAVLPVVKRLSFTKDS"
BASE COUNT          719 a          598 c          571 g          693 t
ORIGIN      
        1 atttaggggg cgttatgcat ttatcttcaa aacatcttag cactatccgc tttctcgtta
       61 ttgcttcatt cgttgtagct atcagttacc gactttttgt tgcctccaat gacgaaatga
      121 atcctcttgc tattattgcc cattcaatag cgacaatagt tagacggttt gaaaaaccgt
      181 aatacaataa acatccgaaa taatttcgaa agcaactcat ttttactctg caaacaatca
      241 gaaaagactt aattttgcta agttaatgca ttaatctaaa aacgctttaa atcaatacat
      301 aaccattatc tcttgggatt atttacatgc gcaaaagttt aatgctgtta cttgcttcaa
      361 cattgattat ttctggatgt gcaacaaaaa aacaactcgt tccaactggt ggaagcaaat
      421 cagacggcac agttaggatg agttattctt acggtatgtt tgaaagtcct gttgtagatc
      481 cacaacaagg caggaatgca gccaaagcgc gttgtgccgc ttaggggata ttcaggagcc
      541 gatccttttg gtggattcac ttctcaatgt tcacaacctt cttcatctgg ttgtatgcaa
      601 acacttgtga ctatcgaata tcaatgcact ggcgatatta agaagtaata attaggggct
      661 tccagcccct tctataacca ttcatggaac agggacaacc gaaatcactt taaaccctga
      721 aacagccgtt actccattag atggagaatt aaatctcaca gtatcttttc ttactgcatc
      781 atgaatttca tcttttgttg gttcatgctc tgaatggaat aaaacctctt ccattctaat
      841 ttgatcaccg tctctatgct cataagtaat cttgtagcta acagtcatat caacctcatg
      901 caggggaatt gtgagattat tatagacaat agaaaccata aagccccgtt ggtgatacag
      961 caacaagcgg gagcgtagcg acttcatcag attgtcagaa agatcacacc ttatcaggat
     1021 aaccgtgtac ccgttgggag cgtggctgaa acgctgatag agcttgcata tggtttgcaa
     1081 ggaccaatat caccataaac ctgtttacgc agccacaagg ccgcacatcg ggcttaaatg
     1141 cgtgtgttca gtctgtcgat gacattacaa tgcctggatg ggctttatct tcacgttgtg
     1201 ctatcgcggt gtgagaggtg caactgccgc caacgttagg ttatactgtc atctcaccgt
     1261 gtaacttaac gtgacagtta ctaagggcgg ttcacaatgg tagaactcct aagcaaatta
     1321 aataggtaac tgtttaagtt gctgacagag aagacttttt tagtcttctc cacctgggga
     1381 gattctggag cgggcgaagg gagcctacga caaatcgaag acaaccagct aacctcttgt
     1441 ttcttaaaga caggtgaatc caattggttg tagtgatagt cacatattta gcgatagacg
     1501 gtcaagactt gaagcacgta atattccctc taaaggaata gaacccacgg tctgactacc
     1561 cgaccccttt gagctgactc agggtcgggc tatgggggct tttggctcgc tctttatatt
     1621 agataaggtc tcacattttt cagtcaaaac tcatcgtcta atagcccata gccagaccac
     1681 caatcccagc tttagcagga agaccacgag atagactttg tgtaggtcca tttggtcctc
     1741 ctaccttctg tattcacgaa ctagattgct agtacaaaat aaaggccaga catccagttc
     1801 ggaagtctga ccaatagtcg ttattgttag ttagcttgtc gctagtaatc ctagctgtct
     1861 ttagtgaagc tcaggcgttt gactacaggc aggacagcag tagccgagcc agtacccatc
     1921 ttgatggtcg tagcagcttc agctacaaca aacaccttgc cgagaatctc aaggtcgtga
     1981 gactgggagt caccatcatg tgaaaggacc accgtaacgt tctcgccatc gtgacggaag
     2041 cagccgaagc tcagagccgt aaagcgctta gccatcatga agacgccacg gtcttcaccg
     2101 ttgtaatagg cgatgtctgt tcccagcata tcgacgatag cgtcttcacc accgaagccc
     2161 tgcttagcag ccagacggga gagagccttg aggtgtgact catgggcgat gatgccgtag
     2221 tcagaaacct cagaaccgaa agaagactcc gtgttctcgt acagggcatc catgatagcg
     2281 tcagccttag cggtcaggct accagtcagg gccggaagtt ctacggtctt cagcagcttt
     2341 gaggactcca gcacgtcaac catcttagag ttaatggtac gaaccacgtt atcgcagatg
     2401 ttcagtgcgt cctgctggag cgtcccctga gtgaaaccag tggtcgactt ctggtcccaa
     2461 agctttgtct ggtgagacac gaggatagcc tgttcaatcg gctcaacggt gatttcagtg
     2521 ccagacggag cggtcacaac ttcaggtcgc ttaccaccac ggacagggac cagcacagag
     2581 c
//
LOCUS       DADMHC010000300         2514 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.303, whole genome shotgun sequence.
ACCESSION   DADMHC010000300 DADMHC010000000
VERSION     DADMHC010000300.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2514
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.303"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            1007..1966
                     /locus_tag="JNZ57_003993"
     CDS             1007..1966
                     /locus_tag="JNZ57_003993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid stabilization protein"
                     /protein_id="HAY8829999.1"
                     /translation="MLKVSCDDGSTNVKLAWLEDGEVRTSLSGNSFKEGWNPGLFNAG
                     KVYNYVVDEKKYTYDLGSTAVIGTTHVSYQYSTTNLLAIHHALLTSGLQPQDVELTVT
                     LPVTEFFDNDNQPNEERIERKKANVLREISLNKGETFKIKKVNVMPESLPAAFESLKK
                     DKVNKLERSLIIDLGGTTLDCGLILGAFEGISEIRGYSEIGTSRITHTVMNALTKAST
                     PCNYFIADELIKNRHDNEYLQTLINDVAEIKNISHIIDREVKSLAESIRQEISTFSGM
                     NRIYLTGGGAELIYPHIKQYFPNLKVNKVDEPQFALVKAMVHA"
     gene            1966..2361
                     /locus_tag="JNZ57_003994"
     CDS             1966..2361
                     /locus_tag="JNZ57_003994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid stabilization protein"
                     /protein_id="HAY8830000.1"
                     /translation="MESSDPKKRKKVVAYLHPALYPQDNLTQQTIDSLPVQMRGDFYR
                     QSLICGAALYSVDPRLLTLISGFFSEKITAENLVKLIEQTTGYTSTSIDISVLKNIIE
                     ASSENKSESITSKDDFEEQTRRNLSMLKK"
BASE COUNT          832 a          572 c          515 g          595 t
ORIGIN      
        1 taatgaaaga cccagtggaa gtctgcccgc tttcgcgtag ggtaatgttg ccgggctcaa
       61 cccttatccg gtccattaca gactggcatt cgctttttcc accttctttt acccgcaccg
      121 ccaacagtat cccttgcggt taacctgcct cacgaggcag cgatacgggc ttaccatgtt
      181 ccacctgaat aacaacagta ggttagactc tgctcacaac accggtggtt tattgtccgt
      241 gtacccctag caaacagagg agtaaccaac cacatacctt ttggttcaag cctgtcagca
      301 tctttggctt gttctggtta acgacgcttc agcagttcac atatgttagt catgctaccg
      361 agcctagacc tcctccgcct gatgctggca gattacatgt aacctcacgg tttcatgcga
      421 tccgaagatc cggtttcatt gtcctgacag cttcacaccc caccgttacc agtgacgcat
      481 gtgtcagtag gctactgatg acggaacatc aggttccctg acggaatcga actccgctgg
      541 aacaattatt caggcgactt catgtcgcac attcgagcac cagtttggca tgggaattct
      601 cctctcacat gcggcctcca tcaggccgtg ccgcacctgt aaccgggcga ccgcatacga
      661 atgcaggtgc ggccccgaag ccgcagcgcg tggaggagga acgacgaaac gtgaccgggt
      721 gaggaggccg gcgacagcga cacacttgca tcggatgcag cccggttaac gtgccggcac
      781 ggcctagtta agtagtatcc gtctcagttc gtggcgcaaa atgagaaacc aataagaact
      841 caaaatgaac cacaacaaga acataaagag actctaaaag aacaacaccg cttgacatag
      901 actcaaaatg agtcacaata agaaacaata aaaaactcaa aaagatacac cgacataaag
      961 gatgctcaat ttgagataaa cacaaactca aaacgaggca aaaagaatgc taaaagtatc
     1021 atgcgatgat ggttcaacta acgtaaaact ggcctggctt gaagatggcg aggtaagaac
     1081 cagtctgtca ggaaacagct ttaaagaagg ctggaacccg ggactgttta atgccggcaa
     1141 agtgtacaat tacgtcgtgg atgaaaaaaa atacacctat gatttgggaa gcactgctgt
     1201 cataggtaca acacatgtca gttatcaata cagcaccacc aatctgcttg ccatacatca
     1261 tgcactgctg acatccggcc ttcagccaca ggatgtagaa ctgacagtaa cattacctgt
     1321 gaccgaattc tttgataatg acaatcaacc aaatgaagaa agaatagaaa gaaaaaaggc
     1381 aaatgttctc cgtgagatat ctctgaataa aggggaaaca tttaaaatta aaaaagttaa
     1441 tgtaatgcct gaatctttgc cagctgcatt tgaatcacta aaaaaagata aagtaaacaa
     1501 acttgaacgc agcctgatta tcgatcttgg aggaaccact ctggattgtg gtttaattct
     1561 cggtgcattt gaaggcattt ctgaaatccg tggctattca gaaatcggga catcccgcat
     1621 cactcatacc gtcatgaatg cgctgacgaa agcctccaca ccatgtaatt attttattgc
     1681 tgatgagtta ataaaaaaca gacacgataa tgaatatctc cagacattaa taaatgatgt
     1741 agctgaaata aaaaacattt ctcatataat agacagagaa gtgaaatctc tggcagaaag
     1801 catcaggcag gaaatttcaa cattctcagg aatgaaccga atctatctca ctggcggagg
     1861 agccgagctt atttaccctc acataaagca atatttcccg aatctgaaag tgaacaaggt
     1921 ggatgaacct cagtttgcat tggtgaaagc aatggtgcat gcgtaatgga aagcagtgat
     1981 ccaaaaaaaa gaaagaaagt tgtggcatac ctgcacccgg cactttatcc gcaggacaac
     2041 ctgacacaac aaacaataga ctctctccca gtacaaatgc ggggagattt ctacagacaa
     2101 tcccttattt gcggagcagc tctttattct gttgaccccc gactgttaac gctaatcagc
     2161 ggttttttca gtgagaaaat cactgcagaa aatctggtga aacttataga acaaacaaca
     2221 ggatacacat ccacatcaat tgatataagt gtgttaaaaa acatcataga ggcatcttca
     2281 gaaaacaaat cagagagcat cacttcaaaa gatgatttcg aagaacaaac cagacgcaat
     2341 ctttctatgt taaaaaaata ataaaagaag agcaggttca gttaattacc tgctcttctt
     2401 ttatacatac taaaaaatca gatttttacg aatattcaga ttatcataaa aaatgcaaca
     2461 gacaggaatg caataatttt gcattatctc gttgcttgta atgcaaatat gcat
//
LOCUS       DADMHC010000301         2508 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.304, whole genome shotgun sequence.
ACCESSION   DADMHC010000301 DADMHC010000000
VERSION     DADMHC010000301.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2508)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2508)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2508
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.304"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(1..193)
                     /locus_tag="JNZ57_003995"
                     /pseudo
     CDS             complement(1..193)
                     /locus_tag="JNZ57_003995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706790.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1364 domain-containing protein"
     gene            complement(193..810)
                     /locus_tag="JNZ57_003996"
     CDS             complement(193..810)
                     /locus_tag="JNZ57_003996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1367 family protein"
                     /protein_id="HAY8830001.1"
                     /translation="MPPEKADGHIQLIKQTSSGLLLPATPESCDFLHQIKTGEWIHAD
                     FKRVRNYAFHKRFFKLLQLGFDYWTPIGGAITPRERELVSGFVEYLCESVGREHTPAL
                     SEAAEQYLNTVATRRTRDTALLKSFEAFREWVTIQAGFYTEHIYPDGSRGRRAKSISF
                     ANMDETEFQQVYKSVLNVLLNWILFRKFSSPEQVENVAAQLLEFA"
     gene            complement(830..1117)
                     /locus_tag="JNZ57_003997"
     CDS             complement(830..1117)
                     /locus_tag="JNZ57_003997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830002.1"
                     /translation="MKIEELREIFSENGLYAVRVENGAIVSHCRIRCLQSQQRKSGAV
                     LFYFCNGLLTDGFILREDEFVTSLRVLKEIGFKAGFLLLLKNKLIYNLEQD"
     gene            complement(1367..1579)
                     /locus_tag="JNZ57_003998"
     CDS             complement(1367..1579)
                     /locus_tag="JNZ57_003998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Hok family toxin"
                     /protein_id="HAY8830003.1"
                     /translation="MLCTCRLASYMPKGKEKQAMKQQKAMLIALIVICLTVIVTALVT
                     RKDLCEVRIRTGQTEVAVFVDYESRK"
     gene            complement(1750..2415)
                     /locus_tag="JNZ57_003999"
     CDS             complement(1750..2415)
                     /locus_tag="JNZ57_003999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012421537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HAY8830004.1"
                     /translation="MTVADFKRPKLELPNGANKLLLHSCCAPCSGEVMEALQASGIDY
                     TIFFYNPNIHPQKEYLIRKDENIRFAEQHGVPFIDADYDTDNWFERAKGMEWEPERGI
                     RCTMCFDMRFERTALYAAENGFSVISSSLGISRWKNMQQVNDCGRRAVAHYPGMVYWD
                     YNWRKQGGSSRMIEISKREKFYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKE
                     EKE"
BASE COUNT          628 a          655 c          565 g          660 t
ORIGIN      
        1 ctttctccag atttcttgcg tgcgaaaaac accttctgca tgcatcaggc gtaattcttc
       61 tttggtgtaa tcgcttgttt ttacccgcca gtcggtaatg cgccagcaca gacgtttccg
      121 gatcgtgatt gcagtagcta ggaattctga cggtgcacat ctgcccccgc gccgctttac
      181 gtaaatccac cattacgcaa actccagtag ctgcgcggcc acattttcga cttgttccgg
      241 agaggaaaat ttacggaaca ggatccagtt caacagtaca ttcagcacag atttataaac
      301 ctgctgaaac tcggtttcgt ccatattcgc aaacgagatg gatttcgccc tgcgcccacg
      361 gctaccgtcc ggataaatat gctcggtgta aaatccggcc tgaatggtta cccactcgcg
      421 gaaagcctca aacgacttta gcaatgctgt atctcgggtt ctgcgtgtcg caactgtatt
      481 cagatattgc tctgcggctt cgctcagagc tggcgtatgt tcccggccta ctgattcgca
      541 caggtactca acgaagcctg ataccagttc tcgttcgcga ggcgtaatcg ccccaccgat
      601 cggagtccag taatcgaatc ccagttgcag gagtttgaaa aaacgcttgt ggaatgcgta
      661 gttacgcaca cgcttaaagt ctgcgtgtat ccactcacct gttttgattt gatgcagaaa
      721 atcgcaactc tccggcgtcg ccgggagaag taatccggaa gaggtttgtt tgatcagttg
      781 tatatggcca tcggctttct ccggtggcac ggtgttacac agcaggagtt caatcctgct
      841 caagattgta gatgagttta ttcttcagca aaagcagaaa accagcctta aaaccaatct
      901 ctttcaaaac ccgtaatgat gtgacaaatt cgtcctcacg caaaataaaa ccgtccgtca
      961 gaagtccatt acaaaaataa aataacacag caccgctctt cctttgttga gattgcaaac
     1021 atctaatgcg gcaatggctg acaatcgctc cattctcaac gcgcacagca tagaggccat
     1081 tttcactaaa aatttcacgc aattcttcga ttttcatctt cagaatcctt ccagataaat
     1141 agctctcccc tgttcggggt ccatccctct tctccctgcg cgctacttaa gtgagtcgat
     1201 tctatctgcg aaggtgcgcg aatcaaattc accggaaata aacaacaaaa aacccgccga
     1261 aacgctgaga gatcacagcg atgggcgggt taagtgcggg tgcgttgagg atgcctgaca
     1321 catcagaggt gggcggggat gggatcagct ccccgcccgg tcactcttac ttcctggatt
     1381 cgtagtctac gaagacagcg acctccgtct ggccggttcg gattcgtacc tcacagaggt
     1441 ctttcctcgt taccagtgcc gtcactatga cggttaaaca gatgacgatc agggcgatta
     1501 acatcgcctt ttgctgcttc atagcctgct tctccttgcc tttcggcatg taagaggcta
     1561 acctacatgt gcaaagcatg aaattggcct cagattaatg ttaagcgtct tgccggacgc
     1621 gtaatgttaa ctggggcttt tctctatctg ccttttagtg ttcatgcctg aagcagatag
     1681 cctcaagcac ccgcagtcat tctacttacc tcgccaatat gaaatcaatc agaaaggtgc
     1741 cccataaaat cactccttct cttctttacc gtagtggagt tgaccaattt tgataagagg
     1801 gcgtccctga gatttgcggt gtagattggt atcgcgcaga gaatacacac agccacaata
     1861 ttcctgctga tagaattttt cgcgcttgct gatttcaatc atacgggacg agcctccctg
     1921 cttgcgccag ttataatccc agtacaccat gcccggataa tgcgcgacgg ctcgccgccc
     1981 acagtcgtta acctgctgca tatttttcca gcgtgaaatg cccagtgaac tgctgatcac
     2041 actgaaacca ttttcagcgg cgtacagcgc tgtccgctca aaacgcatgt caaaacacat
     2101 ggtgcaacgg atccctcgtt cgggctccca ttccattcct ttggctcgtt caaaccagtt
     2161 gtctgtgtcg taatcagcat caataaacgg cacgccgtgt tgttcagcaa agcgaatatt
     2221 ctcatcctta cgaattaaat actctttctg aggatgaatg ttcgggttgt agaaaaagat
     2281 ggtgtagtcg attcccgagg cctgaagcgc ctccatcacc tcaccggaac atggagcaca
     2341 gcaagagtgc agtagtagtt tgtttgcccc gtttgggagc tccaatttgg gccgtttgaa
     2401 atcagcaact gtcataaata tgtttattgg ggtcataaaa atatcaaaga gtgtagcatt
     2461 agaacggggc tatcggaaac agatgtgtga ctgctccccg ccctttcg
//
LOCUS       DADMHC010000302         2434 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.305, whole genome shotgun sequence.
ACCESSION   DADMHC010000302 DADMHC010000000
VERSION     DADMHC010000302.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2434)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2434)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2434
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.305"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            61..405
                     /locus_tag="JNZ57_004000"
     CDS             61..405
                     /locus_tag="JNZ57_004000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016235607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdfR family protein"
                     /protein_id="HAY8830005.1"
                     /translation="MTQNYELIVKGIRNFENKVTVTLALRDKKRFDGEIFDLDISLDR
                     VEGAALEFYEAAARRSIRQVFLDVAAGLCEGDEQSPEKRPVILEAQDVLITYRGKLPG
                     IITGSLKSPPKW"
     gene            complement(371..643)
                     /locus_tag="JNZ57_004001"
     CDS             complement(371..643)
                     /locus_tag="JNZ57_004001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000369850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830006.1"
                     /translation="MDNNTISLQELLDSISRLREDVNTLTVAFSYLAFSIPREQMQST
                     LASIQFESCNPKWSQEQQDSFRRLAVLLDEKYAGKITISADSSENP"
     gene            749..1282
                     /locus_tag="JNZ57_004002"
     CDS             749..1282
                     /locus_tag="JNZ57_004002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HAY8830007.1"
                     /translation="MNAKIRYGLSAAVLALIAAGAPAPDILDQFLDEKEGNHTTAYRD
                     GAGIWTICRGAILVDGKPVVPGMKLSKEKCDQVNAIERDKALAWVEKNIKVPLTEPQK
                     SGIASFCPYNIGPGKCFSSTFYRKLNAGDRKGACAEIRRWIYDGGRDCRNRSNNCYGQ
                     VSRRDQESALACWGIDR"
     gene            1503..1616
                     /locus_tag="JNZ57_004003"
     CDS             1503..1616
                     /locus_tag="JNZ57_004003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830008.1"
                     /translation="MKGIEVETPASLDLTRAAAFAIRIVAIAVLVWAIRWW"
     gene            1618..2085
                     /locus_tag="JNZ57_004004"
     CDS             1618..2085
                     /locus_tag="JNZ57_004004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysis protein"
                     /protein_id="HAY8830009.1"
                     /translation="MNRVLCVVIIALLVACGALSLGLNHYRVHAIIYKEQRDKKASEL
                     ELANATITDMQIRQRDVAALDARYSRELADARAENETLRADVAAGRKRLRINATCSGT
                     VREATGTSGVDNATGPRLADTAERDYFILRERLMTMQKQLEGAQDYIRTQCLN"
BASE COUNT          627 a          531 c          694 g          582 t
ORIGIN      
        1 ctaacctgta tttcaaaatc agagaggacc gtcgtaaggc tgcacgggga gagtaattca
       61 atgactcaaa actatgaact gattgtgaaa gggatccgca attttgagaa taaagttacg
      121 gtaactttag cgttacggga caaaaaacgc tttgacggtg aaatttttga cctggacatc
      181 tcgctggacc gtgttgaagg tgccgcgctg gagttttatg aggcagcagc cagaaggagc
      241 atcagacagg tcttcctgga tgttgctgcc gggttatgtg aaggggatga gcagtcgccg
      301 gaaaagcgcc ccgtaatttt agaggcgcag gatgtgttga taacctacag aggaaaacta
      361 ccgggaataa ttacgggttc tctgaagagt ccgccgaaat ggtaatttta ccagcatatt
      421 tttcatccag taatacagca agccgcctga aagagtcttg ttgttcctga gaccatttgg
      481 gattgcatga ttcaaactgg attgatgcca gcgttgattg catctgttcc cttggaattg
      541 agaatgccag atatgagaag gcgacggtaa gggtattcac gtcttcccga agcctggaaa
      601 tgctgtcgag caactcctgt agagaaatgg tgttattgtc cataaataat cctcatgatt
      661 gtattgacct gttagcagcc tgaggcaaca ggctggaact gataaacata tccagggctc
      721 agaaaccgat aaatcctgat aaatatccat gaacgcaaaa atcagatacg gcctgtcggc
      781 tgccgttctg gcgctgattg ccgctggtgc gcctgcgcct gacattctcg accagtttct
      841 ggatgaaaag gaaggtaacc acaccacggc ataccgtgat ggcgcgggta tctggaccat
      901 ctgccgcggt gccattctgg tggatggtaa acctgtcgtc ccgggcatga agttgtcgaa
      961 ggagaaatgc gaccaggtta acgccattga acgtgataag gcgctggcat gggtggagaa
     1021 aaacatcaaa gtgccgctga ccgaacctca gaaatcgggg atcgcgtcat tctgtccgta
     1081 caacattggc cccggtaagt gtttcagctc aacgttttac cggaaactga acgccggaga
     1141 ccggaaaggt gcatgtgctg aaattcgtcg ctggatatat gacggcggca gggactgtcg
     1201 gaaccgctca aataactgtt acgggcaggt atcgcggcgt gaccaggaga gcgcgctggc
     1261 gtgctggggt atcgacaggt agcagaatat tttgctgaaa aatgacgctt gctcacgcgg
     1321 gcggataaca cgaagtcctg tgaactggca aaacctaagt gaataaaagt aaaaaccccg
     1381 tttgttggca gcaagcgggg ttttgtgttt tctgaccttg agtaaggcaa gggagaaatt
     1441 atggtgaggg aggtgctttc cctgtgagga agtataaaag attctttctg aggttgtcca
     1501 ttatgaaagg cattgaagtg gagacgccag ccagtctgga tttaacaaga gcggcagctt
     1561 ttgccattcg tattgtggca attgctgttc tggtttgggc aatccgttgg tggtgatatg
     1621 aaccgtgttt tgtgcgtggt catcattgcc ctgctggtgg cctgtggtgc gcttagtctg
     1681 gggctgaatc attaccgtgt tcacgccatc atctacaaag agcagcgcga taaaaaagcc
     1741 agtgagctgg agctggcgaa cgcgacaatt actgatatgc agatacgcca gcgtgatgtc
     1801 gctgcacttg atgccagata ctcgagggaa ttagccgatg cgagagctga aaatgaaact
     1861 ctgcgtgctg atgttgccgc tggtcgtaag cgcctgcgga tcaacgccac ctgctccggt
     1921 accgtgcgtg aagccaccgg cacctccggc gtggataatg caaccggccc ccgactggca
     1981 gacaccgctg aacgggatta tttcatcctc agagaacggt tgatgacaat gcagaagcag
     2041 ctggaagggg cacaggacta tatccgcact cagtgcctga actaagtttt gctgatgcgc
     2101 cgtatcgtcg ctgtattccc tcattaacag agaccgcagc ccgacaggga gactcctctg
     2161 cgcgagtgtg cggggataat ctaaaacgat acacaccggg gtttaccgcg ttaacggagc
     2221 gcggcgttgt cccctcatag tcgccagtcc ggtgcgatgg tggaagaaac aggacgatgt
     2281 gttacctcgc aagccctgtt atgtcatgtg tctgatttgt gatttaagtc ggataattgt
     2341 cgttgccatt aagcagagga ttgatgaccg acagggcggc attgttagaa taagacttat
     2401 ttttatctgt gcggggaatg aaaatgaaaa gaaa
//
LOCUS       DADMHC010000303         2407 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.306, whole genome shotgun sequence.
ACCESSION   DADMHC010000303 DADMHC010000000
VERSION     DADMHC010000303.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2407)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2407)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2407
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.306"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(1..925)
                     /locus_tag="JNZ57_004005"
                     /pseudo
     CDS             complement(1..925)
                     /locus_tag="JNZ57_004005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            complement(976..1551)
                     /locus_tag="JNZ57_004006"
                     /pseudo
     CDS             complement(976..1551)
                     /locus_tag="JNZ57_004006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001368704.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            1555..1955
                     /locus_tag="JNZ57_004007"
                     /pseudo
     CDS             1555..1955
                     /locus_tag="JNZ57_004007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000998048.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="IS66 family transposase"
BASE COUNT          538 a          690 c          599 g          580 t
ORIGIN      
        1 agggcaacag atcgcgtacc cggtttgccg gccagtcctg gagatgctca ataacgtaac
       61 gcagccattt ttctggctct acattgttca gacggcatgt gccgatcagc gagtacaaca
      121 ccaccgcatg ttcgccaccg ctgtcggaac ccgcgaagag ccagtttttc cggcctacgg
      181 ccactccccg taaggcgttc tctgcgatgt tgttgtcgat ttccacccag ccattactgc
      241 agtacacgtt cagggccttc cactgtttca gtaggtatgc gaacgctttt gccgtatccg
      301 agtgacgcga cagtgttttc atctgttgct gtatccggtc atacagtgac tgcatcagtg
      361 gcgcggctct tgcttttctt gccgccagac gctgttctgc tgaacatccc cggacttctg
      421 cctcgatggt atacagttca ccgatacgct gcagggcttc cgtggtgatg tcggttggca
      481 ctcttgcatg cacatcgtgg atttttctcc gggcatgggc catacacgcg gcttccgtta
      541 ttctgccgga ttcgtataac gcccggtaac caccgtaagc atctgcctga agcacaccgc
      601 tgtaaccggc caggtgattc tgtggatgga tacctttccg gtccgggctg tacgcgaacc
      661 agaccgccgg gggcatctgt gaaccggcgt tacggtcatc acggacatag acccacagcc
      721 gggcagttct tgttttacca ctgcccggct cctggaccgg aacggggata tcatccgcat
      781 gaactttacc gggcatcagc acatactggc gcaggacgtc atacagcggc tccagcagtt
      841 cagcaacggc accggtccag cgacccagtg tggcacggct cagctccacg ccctgacgac
      901 ggtatatttc tgactggcgg tataactgtc aacgacggat gaaaagtggc tcttccgcaa
      961 cctgggtgga gattttcatg ccagtggact cattaccctc tgcctgagta gttcaaatcc
     1021 tgctcgacca tacatctggc gtttcagcat cttcttcagg cgatttacat gaccttcgac
     1081 aacaccatta ctccagcgac tactgattgc ctcacatata gctgcagcat cagcttgcat
     1141 ccccgccgcc acgcgccgaa attctgctga accgctttcg tggactcgag tgaaccaact
     1201 gcttagctgt gatttatttt gggttttcag aatacggtag aactcgagtg ccagttgctg
     1261 cgctattttc agctcaggtt ctttttcaca catcagacta ataaatcggg aagcataatt
     1321 ttcttcatcc ctggttattc tccagggcat caaccagcgg cttacccggg acactgaagg
     1381 aagtctgacg gcagtagtaa ccggtgggtt ccagccttta cgccatttgg caaccgcatc
     1441 cctgacgatg gtttcactgc ctgtaaatcc ccgggccacc atttcccgcc atatccggct
     1501 ggcgttataa ttaccacttt ctcgttgctc ttttaaccac tccctccatg gtgtcagcga
     1561 aaaacgaaac cgctgttgaa atccctggaa agctggttgc ggaaaagatg aagaccctgt
     1621 cgcgacactc agagttggcg aaggcgttcg cgtacgcact taaccagtgg ccggcactga
     1681 cgtactatgc gaacgatagc tgggtggaaa tcgacaacaa catcgctgaa aatgccttgc
     1741 gggcggtcag tctgggtcgt aaaaacttcc tattcttcgg ctctgaccat ggtggtgagc
     1801 ggggagcgct actgtacagc ctgatcggga cgtgcaaact gaatgacgtg gatccagaaa
     1861 gctaccttcg ccatgtgctt ggcgtcatag cagactggcc ggtcaaccgg gtcagcgaac
     1921 tgcttccgtg gcgcatagca ctgccagctg aataacacat ccccgtcaat acggccctcg
     1981 ctgtacgctt actcatcacc tgctattaat ccccgagtca gtacttcgcg gcctgacgcg
     2041 atcaccctac tcagtacttc agagcccgcc tccggtacct gcctggcgat cgcccctgtg
     2101 caacaaaata aatcaaccgt tatcaaacca cgatcgttcg tatgcgccgc cgatgacgcg
     2161 cgcctgaaaa acgcgtcaat atgagttccc cggaagctta cgataatacg cttatgaaca
     2221 ttacaacacg ctcatgcgga acctggatgg gggaaggaac ggtgaagctg ttagcgaatg
     2281 accggcgttt gtataaacgc cggtcatgat gaatgatatt tcagaatata cctcgggcta
     2341 aaataccggg acagagatca ggcgtgatta atctgcagca tttttaataa cagaagtact
     2401 gagctta
//
LOCUS       DADMHC010000304         2395 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.307, whole genome shotgun sequence.
ACCESSION   DADMHC010000304 DADMHC010000000
VERSION     DADMHC010000304.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2395)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2395)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2395
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.307"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            86..1006
                     /locus_tag="JNZ57_004008"
     CDS             86..1006
                     /locus_tag="JNZ57_004008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415843.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HAY8830010.1"
                     /translation="MMNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVVSHPSG
                     GVKEQTAGTYAKKLAEKGFVTIAYDASYQGESGGEPRQLENPYIRTEDISAVIDYLTT
                     LSYVDNTRIGAMGICAGAGYTANAAIQDRRIKAIGTVSAVNIGSMFRNGWENNVKSID
                     ALPYVEAGSNARTSDISSGEYAVMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPG
                     YATLRSLNQIITFDAYHMAEVNLTQPMQIVAGSQAGSKWMSDDLYDRASSQDKRYHIV
                     EGANHMDLYDGKAYVAEAISVLAPFFEETL"
     gene            1006..1937
                     /locus_tag="JNZ57_004009"
                     /pseudo
     CDS             1006..1937
                     /locus_tag="JNZ57_004009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562879.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
     gene            1955..>2395
                     /locus_tag="JNZ57_004010"
     CDS             1955..>2395
                     /locus_tag="JNZ57_004010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309933.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HAY8830011.1"
                     /translation="MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP
                     TNSKIIMGDVLNHAALKQAMQGQDVVYANLTGEDLDIQANSVIAAMKACDVKRLIFVL
                     SLGIYDEVPGKFGEWNNAVIGEPLKPFRRAADAIEASGLEYTILR"
BASE COUNT          679 a          518 c          593 g          605 t
ORIGIN      
        1 tttagggtct aatcaactta atgatcaata tctatagtga tatcaccaac cgttaaaacg
       61 aaccgacaac tccatgagga acggaatgat gaataataaa gtcagcttca ctaacagcaa
      121 taatccaacc atctctttgt ctgcagtgat ctatttccct ccaaaatttg atgaaacccg
      181 tcagtatcag gcaattgtgg tatctcaccc aagtgggggc gttaaagaac aaacggccgg
      241 aacctatgcc aaaaaactgg cggaaaaggg atttgtcact attgcttatg acgcatctta
      301 tcaaggtgaa agtggcggcg agccgcgtca gttagaaaac ccatacattc gtactgaaga
      361 catcagtgcc gtgattgatt acctgacaac gctttcttat gtcgacaata cccgaattgg
      421 tgcgatggga atttgtgccg gtgcaggata tacagccaat gctgcaattc aggatcgccg
      481 catcaaggcc atcggtaccg ttagtgcggt caatattggt tcgatgttcc gtaatggttg
      541 ggaaaacaat gtgaaatcta ttgatgccct gccatacgtt gaagcgggtt caaacgcccg
      601 aaccagcgat attagcagcg gagaatatgc cgttatgcca ctggcaccaa tgaaggagtc
      661 cgatgcgccg aacgaagaac tgcgtcaggc ctgggagtat taccacaccc ctcgcgcgca
      721 gtatccaaca gcaccgggtt acgctacttt gcgcagcctt aaccagatta ttacctttga
      781 tgcttaccat atggcggaag tgaacctgac tcagccgatg cagattgtgg cgggcagcca
      841 ggcagggagc aaatggatga gtgacgatct gtacgatcga gcatcaagcc aagataaacg
      901 ctatcacatt gttgaaggcg caaaccatat ggatctttat gacggcaaag cctatgtggc
      961 tgaagcaatt tcagtattag ctccgttctt tgaggaaact ctgtaatgaa acatattcaa
     1021 atccgcaata gtgatatggc ctggcatatt gctgccaata ttcagtttcc accaaatttt
     1081 gatgagtcaa aacagtatcc ggcgattatc agcgtccatc cttttggcag ttgtaaggag
     1141 cagacgtctg gcaatatcta tggcaaagca ttggctgaaa aaggctatct cgttctcgct
     1201 tatgacgcca gtttccaggg agaatctggt ggggagcctc gctggataga agatccgaca
     1261 cagcgcgtag aggatattag ccgtgttatc gattatgcag taactctgcc atatgttaat
     1321 gctgaacgta ttggcgtgct gggagtgtgt gggggtggtg gctatgccat taatgccgcg
     1381 ctgacagaaa aacgaattaa agcagtagtg agtattacgg gtgttaatat cgggcgtctt
     1441 tttcgggaag gtttcagcaa ttacgatccg attggcgcat tgaatgcaat ggcgtcgcaa
     1501 cgaaccaaag aggctcgtgg tggagattac agatcaacga attacttccc gccagcctgg
     1561 atgcagcaaa agcccatgga ctgaccgaac gcgatgttta tgaagcaact gactactata
     1621 aaacaccacg cgggcaacaa ccgggaggtg cgacaaaaat gttgttctca catgcacaga
     1681 aaacgctggc ctgggatgcc ttcgcattta ctgaagtgtt actgactcag ccggtgatgg
     1741 tagtagttgg tgaaaaagtc ggtgccttcg gtgcttatcg tgatggactg gaagtctatg
     1801 gccgggcgat ggtttcgcag gatcgtcagt tagtttcatt acccgatttc tcacattatg
     1861 aactgtatga caaaccggaa gcagttcagg aggcgctgga aaaagttatt ccttttttca
     1921 acccccatct gggataagtt tcatgagaaa tattatgaaa aatgtactga ttcttggtgc
     1981 tggcggtcag atagcccgcc atgtgattaa tcaactggca gataaacaaa ccattaaaca
     2041 aactttattt gcccgtcagc cagcaaaaat ccacaaaccc tatccaacta atagcaagat
     2101 tattatggga gatgtactga atcatgcagc actgaagcag gccatgcagg gacaggacgt
     2161 tgtgtatgcc aaccttacgg gggaagattt agatattcag gcaaattcag tgatcgctgc
     2221 gatgaaagcc tgtgatgtta aacgtctgat ctttgttctt tccctcggta tttatgatga
     2281 agttccagga aaatttggcg aatggaataa tgcagttatt ggtgaacccc taaaaccatt
     2341 ccgcagggct gcggatgcaa ttgaggcttc tggactggaa tatacaattc ttcgc
//
LOCUS       DADMHC010000305         2372 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.308, whole genome shotgun sequence.
ACCESSION   DADMHC010000305 DADMHC010000000
VERSION     DADMHC010000305.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2372)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2372)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2372
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.308"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            131..406
                     /gene="frmR"
                     /locus_tag="JNZ57_004011"
     CDS             131..406
                     /gene="frmR"
                     /locus_tag="JNZ57_004011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414891.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formaldehyde-responsive transcriptional
                     repressor FrmR"
                     /protein_id="HAY8830012.1"
                     /translation="MPSTPEEKKKVLTRVRRIRGQIDALERSLEGDAECRAILQQIAA
                     VRGAANGLMAEVLESHIRETFDRNDCYSREVSQSVDDTIELVRAYLK"
     gene            441..1550
                     /locus_tag="JNZ57_004012"
     CDS             441..1550
                     /locus_tag="JNZ57_004012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase"
                     /protein_id="HAY8830013.1"
                     /translation="MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDA
                     FTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGK
                     TNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEAN
                     HEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID
                     TNPKKFDLARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALES
                     AHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGD
                     IDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIRY"
     gene            1643..>2372
                     /gene="fghA"
                     /locus_tag="JNZ57_004013"
     CDS             1643..>2372
                     /gene="fghA"
                     /locus_tag="JNZ57_004013"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HAY8830014.1"
                     /translation="MELIEKHASFGGWQNVYRHYSQSLKCEMNVGVYLPPKAASEKLP
                     VLYWLSGLTCNEQNFITKSGMQRYAAEHNIIIVAPDTSPRGSHVADADRYDLGQGAGF
                     YLNATQAPWNEHYKMYDYIRNELPDLVMHHFPATAKKSISGHSMGGLGALVLALRNPD
                     EYVSVSAFSPIVSPSQVPWGQQAFAAYLGENKDAWLDYDPVSLISQGQRVAEIMVDQG
                     LSDDFYAEQLRTPNLEKICQEMNIK"
BASE COUNT          570 a          572 c          653 g          577 t
ORIGIN      
        1 ttcctctttg ttttccgacc acattcaccg gataaatttt attctccagt gttatatact
       61 ataggggggt atgcattgac atatagcata cccccctata gtatattgcg tgcagataat
      121 gaggtgcgaa atgcccagta ctccggaaga gaagaaaaag gtccttactc gagttcgtcg
      181 tattcgaggg cagattgatg ctctggaacg gtcgctggag ggtgatgccg aatgccgtgc
      241 catactccaa cagatcgctg ccgttcgggg cgcggctaat gggctgatgg cagaagtgct
      301 tgaaagccat atccgggaaa cgtttgaccg aaatgactgc tacagccgcg aagtcagcca
      361 atccgttgac gacactattg aactggttcg agcctatctt aaatagctga atctattacc
      421 atattgagga agagcgagag atgaaatcac gtgctgccgt tgcatttgct cccggtaaac
      481 cgctggaaat cgttgaaatt gacgttgcac caccgaaaaa aggtgaagtg ctgattaaag
      541 tcacccatac cggcgtttgc cataccgacg catttaccct ctccggggat gacccggaag
      601 gtgtattccc ggtggttctc ggtcacgaag gggccggcgt tgtggttgaa gtcggtgaag
      661 gcgtaaccag cgtcaaacct ggcgaccatg tgatcccgct ttacaccgcg gagtgcggcg
      721 agtgtgagtt ctgtcgttct ggcaaaacta acctctgtgt tgcggttcgc gaaacccagg
      781 gtaaaggctt gatgccagac ggcaccaccc gtttttctta caacgggcag ccgctttatc
      841 actacatggg gtgctctaca ttcagtgaat acaccgtggt cgcggaagtg tctctggcca
      901 aaattaatcc agaagcaaac catgaacacg tctgcctgct gggctgtggc gtgaccaccg
      961 gtattggcgc ggtgcacaac acagctaaag tccagccagg tgattctgtt gccgtgtttg
     1021 gtcttggcgc gattggtctg gcagtggttc agggcgcgcg tcaggcgaaa gcgggacgga
     1081 ttatcgctat tgatacgaac ccgaagaaat tcgatctggc gcgtcgcttc ggtgctaccg
     1141 actgcattaa cccgaatgac tacgacaaac cgattaaaga tgtcctgctg gatatcaaca
     1201 aatggggtat cgaccatacc tttgaatgca tcggtaacgt caacgtgatg cgtgcggcgc
     1261 tggaaagtgc gcaccgcggc tggggtcagt cggtgatcat cggggtcgcg ggttctggtc
     1321 aggaaatctc cacccgtcca ttccagttgg tcactggtcg cgtatggaaa ggttccgcgt
     1381 ttggcggcgt gaaaggtcgt tcccagttac cgggcatggt tgaagatgcg atgaaaggtg
     1441 atatcgatct ggaaccgttt gtcacgcata ccatgagcct tgatgaaatt aatgacgcct
     1501 tcgacctgat gcatgaaggc aaatccattc gaaccgtaat tcgttactga tttcccgcag
     1561 gtataccccg tccacttcag acggggttct taatactctc cccgggcagc cgtccggggg
     1621 attaaccgtg agataatgac tgatggaact cattgaaaaa catgccagct ttggcggctg
     1681 gcaaaatgtg tatcggcatt attcccaatc attgaaatgt gaaatgaatg tcggcgtcta
     1741 tctcccgcca aaagccgcaa gtgaaaaatt accggtgctg tactggcttt cgggcctgac
     1801 ctgcaatgag cagaatttca ttactaaatc ggggatgcag cgttacgcgg ctgagcacaa
     1861 cattattatt gttgcgccgg acaccagtcc gcgaggcagt catgtcgcag atgccgaccg
     1921 ttacgatctc gggcaaggtg ccgggtttta cctgaacgcg acgcaagcgc cgtggaatga
     1981 acattacaaa atgtatgact atatccgcaa cgagctgccg gatttagtga tgcatcattt
     2041 tccggcaacg gccaaaaagt ctatctctgg tcattctatg ggcgggctgg gcgcgctggt
     2101 gctggcgtta cgtaacccag atgaatatgt cagcgtctcg gcgttttcgc ccattgtctc
     2161 cccatcgcaa gtaccgtggg gacagcaagc ctttgccgca tatcttggtg aaaataaaga
     2221 tgcctggttg gattacgatc cggtgagtct tatttcacaa ggtcaacgcg ttgcggaaat
     2281 catggttgat caggggttga gtgatgattt ttacgcggaa cagctgcgga ctccaaatct
     2341 tgaaaagatc tgccaggaga tgaatatcaa ga
//
LOCUS       DADMHC010000306         2354 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.309, whole genome shotgun sequence.
ACCESSION   DADMHC010000306 DADMHC010000000
VERSION     DADMHC010000306.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2354)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2354)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2354
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.309"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(81..2300)
                     /locus_tag="JNZ57_004014"
     CDS             complement(81..2300)
                     /locus_tag="JNZ57_004014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgiQ family radical SAM protein"
                     /protein_id="HAY8830015.1"
                     /translation="MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDS
                     CDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFG
                     VTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILG
                     GIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIR
                     DVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKA
                     VTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRY
                     VWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSF
                     CSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAE
                     QTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYI
                     KELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY
                     FISAHPGTRDEYMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYK
                     SEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIE
                     EMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR"
BASE COUNT          548 a          638 c          626 g          542 t
ORIGIN      
        1 cggcatataa ataaatgcct aatgagatag attctgatgt aatatccccg gtagcaattc
       61 tgctaccggg aacagcgaat ttaacgtcca accgccgctt taggccgttt cttcgcacca
      121 gcattcaccg gacgagattg cgtagacgac gctttttttg ccgtagcagg cgtctgacgc
      181 tgggtcgcca tcggcgtatg tttcgtcaac gccggacggg tattgcggtt ctggcgacga
      241 gcttcacgca tctcttcaat ggttggcgca ggcactaagc aatcgcgacg gctaccaatc
      301 agatgctttt tacccatcgc ttccagcgcc tggcggatta acggccagtt tgccggatcg
      361 tggtaacgca acaacgcttt atgcaaacga cgctgcttgt cgcccttcgg tacgaagacg
      421 tcttcactct tataaccaat cttcgccagc gggtttttcc cggtgtaata catggtggtt
      481 gagttcgcca gcggcgatgg gtagaagttc tgtacctggt cgagacggaa acgatgcttt
      541 ttcagccaca gcgccagatt caccatatat tcatcacgcg taccggggtg cgcggagatg
      601 aaatagggga tcagatactg ctctttacct gcctgttttg agtaagtatc gaacagctct
      661 ttaaagcggt catagctgcc catgcccggc ttcatcatct tcgataacgg cccttcttcg
      721 gtatgttccg gggcaatctt cagataaccg ccgacgtgat gggtcgccag ttctttgata
      781 tagcgcggat cttccacggc gatgtcataa cgcacaccag aggcaatcag gatcttttta
      841 atgcctttca gatcacgcgc acggcgatag aggttgatcg ttggttcgtg gttcgtgtcc
      901 atgtgcggac aaatatccgg ataaacgcac gacaaacggc ggcaggtttg ctcagcgcgt
      961 ggcgatttgc agcgcaacat atacatgttg gcagttggcc caccgagatc ggaaattacg
     1021 cccgtaaaac ctggaacggt gtcgcggatc gcttcgatct cattaatgat cgaatcttcg
     1081 gaacggctct gaataatgcg cccttcgtgc tcggtgatag aacagaaaga gcagccgcca
     1141 aagcagccac gcataatgtt gaccgaaaaa cggatcattt cgtaagccgg aatacgggca
     1201 ttgccatagg ccggatgtgg cacgcgcttg tatggcagcg caaaaacgct gtccatctct
     1261 tcggtagaaa gcggaatagc aggcgggttg atccacacat agcggtcgcc gtgtttttgc
     1321 atcaatgcgc gggcacagcc tgggttggtt tcgtggtgca gaatacgcga agcatgggcg
     1381 tacagcactt tatcgccctt cactttctcg aaagaaggca gcaacacgta ggttttttcc
     1441 cacggtttcg ggcgcggtgg ctgcacggtt acggctttgg cttcctgctt tttcggtgcc
     1501 accggtttgt tatccgcgca cggcaaatct tcaccatacg gatgcgggat tgggtcgatt
     1561 tttccagggg tatcaagacg ggtggaatcc acgccgctcc agccaggcag ggcctctttc
     1621 acgataatcg cggtattacg cacatcgcgg atttcactaa tcggctcgcc catcgccaga
     1681 cggtgcgcca cctccaccag cggacgctca ccgttaccaa acatcagcat gtcggctttc
     1741 gaatccacca gcacggaacg gcgcacggta tcggaccagt aatcataatg tgcggtacga
     1801 cgcagactag cctcaatacc gccgaggatc accggtacat ctttccacgc ctctttacaa
     1861 cgctgggtat aaaccagtgt ggcgcgatcc gggcgcttac ccgcgacgtt atccggcgtg
     1921 taggcatcgt catgacgtaa acggcgatcg gcggtataac ggttgatcat cgaatccatg
     1981 ttgccagcag taacaccgaa aaacagattc ggtttaccca gacgcataaa gtcgtctttg
     2041 ctgctccagt ccggctgggc gatgatcccg acgcgaaagc cctgcgcttc cagcatacga
     2101 ccgcaaatcg ccatcccgaa gcttgggtga tcgacatacg cgtcgccagt aaccaaaatg
     2161 atgtcgcagc tatcccagcc aagttgatcc atctcttcac gagacatcgg caaaaacggt
     2221 gccggtccaa aacaggcggc ccagtactgc ggccaggaga acaggtcgcg atccggttgg
     2281 atcagggaga tagagctcat tttgcttcca gaaatgataa aaaaataatc aaaggccggg
     2341 gattataagc cgga
//
LOCUS       DADMHC010000307         2350 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.310, whole genome shotgun sequence.
ACCESSION   DADMHC010000307 DADMHC010000000
VERSION     DADMHC010000307.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2350)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2350)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2350
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.310"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(186..1136)
                     /gene="corA"
                     /locus_tag="JNZ57_004015"
     CDS             complement(186..1136)
                     /gene="corA"
                     /locus_tag="JNZ57_004015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000947142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HAY8830016.1"
                     /translation="MLSAFQLENNRLTRLEVEESQPLVNAVWIDLVEPDDDERLRVQS
                     ELGQSLATRPELEDIEASARFFEDDDGLHIHSFFFFEDAEDHAGNSTVAFTIRDGRLF
                     TLRERELPAFRLYRMRARSQSMVDGNAYELLLDLFETKIEQLADEIENIYSDLEQLSR
                     VIMEGHQGDEYDEALSTLAELEDIGWKVRLCLMDTQRALNFLVRKARLPGGQLEQARE
                     ILRDIESLLPHNESLFQKVNFLMQAAMGFINIEQNRIIKIFSVVSVVFLPPTLVASSY
                     GMNFEFMPELKWSFGYPGAIIFMILAGLAPYLYFKRKNWL"
     gene            1506..2270
                     /locus_tag="JNZ57_004016"
     CDS             1506..2270
                     /locus_tag="JNZ57_004016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiester glycosidase family protein"
                     /protein_id="HAY8830017.1"
                     /translation="MAHRLLIGKGMITLNLKRIFLTLTLLPLFSVAADDCALSDPTLT
                     VQAYTVNPQTERVKMYWQKANGEAWGTLHALLADINSQGQVQMAMNGGIYDESYAPLG
                     LYIENGQQKVALNLASGEGNFFIRPGGVFYVAGDKVGIIRLDAFKTSKEIQFAVQSGP
                     MLLENGVINPRIHPNVASRKIRNGVGINKQRNAVFLLSQQATNFYDFACYAKAKLNVE
                     QLLYLDGTISHMYMKGGAIPWQRYPFVTMISVERKG"
BASE COUNT          647 a          560 c          569 g          574 t
ORIGIN      
        1 aacactatca ataagttgga gtcattaccc ccttatcgta acactcatat tggtattaac
       61 gattttactg agtatcaatt aacacaagaa aataaaatag agcgagtttt caatccgcat
      121 gactttaaaa aagacaattt ttagaaataa gccggataaa aaaatagctt tatccggcac
      181 tcatattaca accagttctt ccgcttaaag tacagatacg gtgccaggcc cgcgaggatc
      241 ataaagataa tcgcgccagg gtagccgaag ctccacttca gttctggcat aaactcaaag
      301 ttcatgccat agctggaagc aacgagcgtc ggcggcagga ataccacgga taccaccgag
      361 aagattttga tgatgcggtt ctgctcgatg ttgataaaac ccatcgccgc ctgcatcagg
      421 aagttcacct tctggaacag agattcgtta tgcggcagca gggattcgat atctcgcagg
      481 atttcacgcg cctgctccag ttgtccaccc ggtaagcgtg ctttacgtac caggaagttg
      541 agcgcgcgct gggtatccat cagacacagg cgtactttcc agccgatatc ttccagttcc
      601 gccagcgtgg agagcgcctc atcgtactca tcgccctgat gcccttccat aatcacccgg
      661 ctcaactgct ccaggtcgct atagatattt tcaatttcat ctgccaactg ttcgattttg
      721 gtttcgaaca gatccagcag cagctcgtag gcgttaccgt ctaccatcga ctggctacgg
      781 gcacgcatac gatacagacg aaaagcgggc agttcacgct cacgcagagt aaacagacga
      841 ccatcacgga tggtaaatgc cacagtggag ttaccggcgt gatcttccgc atcttcaaag
      901 aagaagaagg agtgaatatg caggccgtcg tcgtcttcaa agaaacgtgc cgatgcttcg
      961 atgtcttcca gttccgggcg ggttgccagg ctctggccaa gttcagattg tacacgcagt
     1021 cgctcgtcgt cgtccggttc gacaagatca atccatactg catttacaag gggttgtgac
     1081 tcttcaactt ccagccgggt cagtcggtta ttttccagtt gaaatgcgct cagcatgacc
     1141 gggactccca atgcttaaaa tatcggacag ttcggtgggc acacagaaac aaattgggtt
     1201 tcagaccatt aaacagcctg actcagcgcg acgggaaaaa ttgaggtcgc tgacaaccgc
     1261 taaggctatc agcaaaaagg gatagcctta ggagttgatc ctggatgaca ggatagtgag
     1321 ccagtatcta ctgggtgtgt ccaaggcgaa tgtcctctta gaatgatcgt gcgcgcatgt
     1381 tacgccagca aaattttgcc gtcaacacgc aacagaacac cacagaacaa tagttgaact
     1441 tcgcgctttt tggtactcgt caaggtcgct aacaggataa aaaaatccca catccaggac
     1501 ctataatggc gcatcggcta ctcattggta aaggaatgat caccttgaat ctcaaacgga
     1561 tttttctcac cctcacctta cttcccttgt tttctgttgc cgctgatgat tgcgcactct
     1621 cagatccgac gctgaccgta caggcgtata ccgttaatcc tcaaacagag cgggtgaaaa
     1681 tgtactggca aaaagccaat ggcgaagcgt ggggaacgtt acatgctctg ctggcggata
     1741 ttaatagtca gggtcaggtg cagatggcga tgaacggcgg catctatgat gaaagctatg
     1801 cgccgctcgg tttgtacatc gaaaacggtc agcagaaggt ggcgttaaat ctcgcttcag
     1861 gtgaagggaa tttctttatc cgtcctggcg gcgtgtttta tgtcgcggga gataaagtcg
     1921 gcatcattcg tctggatgcc tttaaaacca gtaaagagat tcagtttgcg gtgcagtcag
     1981 ggccaatgtt attagaaaac ggcgtaatta atccacgcat tcacccgaat gttgcctcgc
     2041 gtaaaattcg taacggtgta gggattaata aacaaaggaa cgccgtgttt ttgttgagcc
     2101 agcaggcgac aaatttttat gattttgcct gttatgccaa agcgaaactg aacgttgagc
     2161 agttgcttta tcttgatggc acaatttcac atatgtatat gaaaggcggg gcaatcccgt
     2221 ggcaacgcta tccttttgtc accatgattt ccgtcgagcg gaaaggttaa gcattgtaca
     2281 ctcgaggagg ccagacaaac tgggactggc tacacagctg gaaaatcatc agataaatga
     2341 agggaaacaa
//
LOCUS       DADMHC010000308         2311 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.311, whole genome shotgun sequence.
ACCESSION   DADMHC010000308 DADMHC010000000
VERSION     DADMHC010000308.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.311"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(265..1212)
                     /gene="icsP"
                     /locus_tag="JNZ57_004017"
     CDS             complement(265..1212)
                     /gene="icsP"
                     /locus_tag="JNZ57_004017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858404.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="omptin family outer membrane protease IcsP"
                     /protein_id="HAY8830018.1"
                     /translation="MKLKFLVLALCVPAIFTTHATTNYPLFIPDNISTDISLGSLSGK
                     TKERVYHPKEGGRKISQLDWKYSNATIVRGGIDWKLIPKVSFGVSGWTTLGNQKASMV
                     DKDWNNSNTPQVWTDQSWHPNTHLRDANEFELNLKGWLLNNLDYRLGLIAGYQESRYS
                     FNAMGGSYIYSENGGNRNKKGAHPSGERTIGYKQLFKIPYIGLTANYRHENFEFGAEL
                     KYSGWVRSSDTDKHYQTETIFKDEIKNQNYCSVAANIGYYVTPSAKFYIEGSRNYISN
                     KKGDTSLYEQSTNISGTIKNSASIEYIGFLTSAGIKYIF"
BASE COUNT          697 a          451 c          406 g          757 t
ORIGIN      
        1 agcggttctt atttctccgg tctcagggtc ggtaatgcca acagtaagtc cacagtaatc
       61 aacgaagagt tttttgaacc gccccggaaa tcctggagac taaacgccct gagaaagagg
      121 taaacagaat gactaaaaat acacgttttt cccccgaagt ccgtcaacgg gcagttcgta
      181 tggttctgga aagtcagggc gaatatgact cacaatgggt ggcaattttt agccatgaaa
      241 acgtaatcaa ctcggtgaac caattcaaaa aatatacttt atacctgcgg aagtgagaaa
      301 accaatatat tcaatacttg cactattttt aatggtgcca gatatattgg tactttgctc
      361 ataaagagat gtatcacctt ttttattaga aatgtaattt ctggagcctt ctatataaaa
      421 ttttgcactg ggggtgacat agtatccaat attcgcagca acagagcagt aattttggtt
      481 ttttatttca tctttaaaaa ttgtctcagt ctgatagtgt ttatctgtat cagatgaacg
      541 aacccaacca ctatatttca gttctgctcc aaactcaaaa ttctcatggc ggtaattagc
      601 agttaatcca atataaggta ttttgaagag ctgtttgtaa cctattgttc tttcaccact
      661 aggatgtgcc ccttttttat tcctgttccc cccgttttca ctataaatat aactccctcc
      721 cattgcatta aaactgtaac gactctcttg gtaacctgct attagtccaa gtcgataatc
      781 caaattattt aataaccaac ctttaagatt cagctcgaat tcgttagcat cacggagatg
      841 cgtattggga tgccagctct ggtcggtcca tacctgaggg gtattggaat tgttccagtc
      901 tttatcaacc atgcttgctt tctggttacc taaagtagtc caaccggaaa ctccgaaaga
      961 cacttttgga attagcttcc aatcgatgcc acctctaaca atagtcgcat tactgtattt
     1021 ccagtccagt tgactaattt ttctcccccc ttccttggga tgataaacgc gttcttttgt
     1081 tttgccactc agagatccta gactaatatc cgtactgatg ttatccggta tgaaaagtgg
     1141 atagttagtg gtagcatgtg tagtaaagat cgcaggtaca caaagtgcaa gtacaaggaa
     1201 ttttaatttc atcgagaact ctactttttt ggttgaaatg tccatgatct tcttacttta
     1261 taagataaac gtcaatgcca agcattattt taattaaata tttgtttatg ttaccaagaa
     1321 catatctttt attataatat ttattgaact tttgtaaaaa taaaaaaata cctcattgtg
     1381 cgaataaagt aacgggggcc atagatttct ctacctacct tttggtgttc atacctgagg
     1441 ctgatagttt caggattccg cgacaattct actcaccttc ttgttctctc gccaatatga
     1501 aatcaatcag aaaagcgttc cataagaaca acgataagac aataaattgt catcacggct
     1561 gcaatagcca acgtgccttt cagtaccaac atgacaacct cctgtatttg acgtaacgtg
     1621 tgctgataaa tatgtatttg tatctcaact gactcaatac aacacttaag tatagttttt
     1681 cagattttgt ttttcccgtg aaatattatg gaaatggcag aagcaataca ttgaattccg
     1741 attcgagtga atacggctag cgggcacctc actttagcac tgaagccatc aacttttatt
     1801 tgacttattt caatggaaag ctttctcact atcagtacag gtaattccca tccttttaaa
     1861 gtcgagagtc agactgcgac taatacagtt aaagtgacca aactcagtta tcctctacac
     1921 attttacctc atgtttactt ggacaattca ttggtgcttt tataaaagaa taaatattct
     1981 actaatttaa tgcatcacct aaaatagtat tttttataat agaactgtat ctatagtata
     2041 ttattaaagc ttaattattt attatgcttt aatgtggttg tccgattaag gactaatcct
     2101 tgaaaacgcc gtatagggcg ggagttcact ctattgcgat aacgtaaccg tacaatattg
     2161 tgcgtttccc aaattgacca ctactgaact attcagggat ttaaatgcaa taaaatggtt
     2221 ggttgaaggt cgtggtgatg atgttagtcc ttttgagaat attccagtgc cagatcttac
     2281 ttataataaa gaggcttggc agtttggata a
//
LOCUS       DADMHC010000309         2309 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.312, whole genome shotgun sequence.
ACCESSION   DADMHC010000309 DADMHC010000000
VERSION     DADMHC010000309.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2309)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2309)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2309
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.312"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(135..1589)
                     /gene="ospC2"
                     /locus_tag="JNZ57_004018"
     CDS             complement(135..1589)
                     /gene="ospC2"
                     /locus_tag="JNZ57_004018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspC2"
                     /protein_id="HAY8830019.1"
                     /translation="MKIPEAVNHINVQNNIDLVDGKINPNKDTKALQKNISCVTNSSS
                     SGISEKHLDHCADTVKSFLRKSIAAQSYSKMFSQGTSFKSLNLSIEAPSGARSSFRSL
                     EHLDKVSRHYLSEIIQKTHPLSSDERHLLSIIINSDFNFRHQSNANLSNNTLNIKSFD
                     KIKSENIQTYKNTFSEDIEEIANHDFVFFGVEISNHQETLPLNKTHHTVDFGANAYII
                     DHDSPYGYMTLTDHFDNAIPPVFYHEHQSFFLDNFKEVVDEVSRYVHGNQGKTDVPIF
                     NTKDMRLGIGLHLIDFIRKSKDQRFREFCYNKNIDPVSLDRIINFVFQLEYHIPRMLS
                     TDNFKKIRLRDISLEDAIKASNYEEINNKVTDKKMAHQALAYSLGNAKSDMALYLLSK
                     FNFTKQDVAEMEKMNNNMYCELYDVEYLLSEDSANYKVLEYFINNGLVDVNKRFQKAN
                     SGDTMLDNAMKSKDSKTIDFLLKNGAVSGKRFGR"
     gene            2014..>2309
                     /locus_tag="JNZ57_004019"
     CDS             2014..>2309
                     /locus_tag="JNZ57_004019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HAY8830020.1"
                     /translation="MARYDLPDEAWTIIKPLLPPEPATPRAGRPWAEHRKIINGMFWV
                     LCSGAPWRDLPERYGAWKTVYNRFNRWSKSGVINIIFNRLLSLLDANGFIDWSAT"
BASE COUNT          705 a          427 c          391 g          786 t
ORIGIN      
        1 tctccaggat tcccggggcg ttcaccacat gcaatgtgtt gttgcagggg aacggtctgc
       61 accatcccct atatcgatca atataacaaa aatgacaacg tcagattcag ggcacaacct
      121 aaatatattt taggtcacct cccaaatcgt ttgcctgata ccgctccatt ttttaataaa
      181 aaatcaattg tttttgaatc tttgcttttc attgcattgt caagcatagt gtccccacta
      241 tttgcttttt gaaatctttt gtttacatca accaatccat tattaataaa atattctagc
      301 actttatagt tggcactatc ttcactaagt aaatactcaa catcatacag ctcacaatac
      361 atattgttgt tcattttctc catctctgcg acatcttgtt ttgtaaaatt aaatttagat
      421 agtaaataaa gtgccatatc agattttgca ttgcctagag aataagcaag agcttgatga
      481 gccatttttt tatcagtcac cttattgtta atttcttcat aattggatgc tttaatggca
      541 tcctccaaag atatatctct gagtcttatc tttttgaagt tatctgtgct tagcattctt
      601 ggtatatgat actcaagctg aaacacaaag tttataattc tatccagact aacaggatca
      661 atgtttttat tataacaaaa ctctcggaat ctttgatctt tactctttct tataaaatca
      721 ataagatgca acccaattcc aagcctcata tctttagtat taaatattgg cacatcagtt
      781 tttccctgat taccatgcac atacctgcta acttcatcca caacctcttt aaagttatct
      841 aagaaaaatg attggtgctc atggtaaaaa acaggtggaa tagcattatc aaagtggtcg
      901 gttaatgtca tatatccata tggagagtca tgatcaatga tatacgcatt agcaccaaaa
      961 tccacagtat gatgtgtttt atttagtggg agtgtttctt gatgattgga aatttcaacc
     1021 ccaaaaaaaa caaaatcgtg gttagctatt tcttcaatat cctcagagaa tgtgttttta
     1081 tatgtttgta tattctcaga cttaatttta tcaaaggact taatattaag agtattattt
     1141 gacaggttag cgttactttg atgtctgaag ttaaaatcag aattaataat aatagagagc
     1201 aagtgacgtt catccgaaga aagaggatga gttttttgta ttatttcaga aagatagtgt
     1261 ctggacacct tatcgaggtg ctcaagtgac cgaaatgatg accgtgctcc agatggcgct
     1321 tcaatagaaa gatttaatga tttgaaactg gtcccttgag agaacatttt actataactt
     1381 tgcgctgcta tagacttcct taaaaagctt ttcacagtat cagcacagtg atctaaatgt
     1441 ttttcactta tgccagaaga ggatgagttt gttacgcatg atatgttttt ttgtaatgct
     1501 tttgtatctt tgttcggatt tatttttcca tcaacaagat caatattgtt ctgaacatta
     1561 atatgattta ctgcttcagg tattttcata aaacatcccc cattatgtgc gtttttatct
     1621 gcagttattt agaataatat tatctaactt aatattttct tgtatgtatt ataacgaaca
     1681 tattttaata tgttgtacga ttttcactct gaaatcccct gagtttaatc acacttcctt
     1741 tactgaaagg aattattgca acagtattat ttgtttttgg atatatatct tgcgccttgt
     1801 tatgtagtta atgctcagaa tatgatagat aaaatagaga cgcagaacag ggcatgctca
     1861 taacatgatg ataacataaa aaattagtaa caataaatga aagaatcatg ggcgctcaac
     1921 aaaaagagag ctaaatagct gcgcggaata gtaggctgtg tcccttaatc atctgagtta
     1981 tagtaactgt ctgtttacac aacatattga actatggctc gctacgacct tcccgatgag
     2041 gcatggacca tcatcaagcc tctgttacct cctgaacccg ccacaccacg ggccggacgc
     2101 ccatgggctg agcaccgtaa aatcatcaat ggcatgttct gggtgttatg ttccggtgca
     2161 ccatggcgcg atttacccga acgatatggg gcatggaaaa ctgtttataa ccgctttaac
     2221 cgatggtcaa agtcaggcgt gattaatatt attttcaaca ggttgctttc gctacttgat
     2281 gcaaacggct ttattgactg gtctgccac
//
LOCUS       DADMHC010000310         2302 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.313, whole genome shotgun sequence.
ACCESSION   DADMHC010000310 DADMHC010000000
VERSION     DADMHC010000310.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2302
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.313"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(101..841)
                     /gene="cysQ"
                     /locus_tag="JNZ57_004020"
     CDS             complement(101..841)
                     /gene="cysQ"
                     /locus_tag="JNZ57_004020"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HAY8830021.1"
                     /translation="MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAA
                     HTVIMDGLRTLTPDIPVLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNI
                     ALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHAD
                     AELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGA
                     HVHDWQGKPLDYTPRESFLNPGFRVSIY"
     gene            1031..>2302
                     /locus_tag="JNZ57_004021"
     CDS             1031..>2302
                     /locus_tag="JNZ57_004021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709984.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2',3'-cyclic-nucleotide
                     2'-phosphodiesterase/3'-nucleotidase"
                     /protein_id="HAY8830022.1"
                     /translation="MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKD
                     TATEKFGLVRTASLINDARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKAGDVHPVYK
                     ALNTLDYTVGTLGNHEFNYGLDYLKNALAGAKFPYVNANVIDARTKQPMFTPYLIKDT
                     EVVDKDGKKQTLKIGYIGVVPPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGAD
                     VVVVLAHSGLSADPYKVMAENSVYYLSEIPGVNAIMFGHAHAVFPGKDFADIEEADIT
                     KGTLNGVPAVMPGMWGDHLGVVDLQLSNDSGKWQVTQAKAEARPIYDIANKKSLAAED
                     SKLVETLKADHDATRQFVSKPIGKSADNMYSYLALVQDDPTVQVVNNAQKAYVEHYIQ
                     GDPDLAKLPVLSAAAPFKVGGRKNDPASYVEV"
BASE COUNT          589 a          563 c          584 g          566 t
ORIGIN      
        1 ttttgcactt taaatacaat ctctttttat ttataacttt ttaggttggg agaaatcagg
       61 atggcagaat caggaaatac actgtttctg ccatctgaat ttagtaaata gacactctga
      121 acccaggatt caggaacgac tcgcgcggag tgtaatccag cggtttaccc tgccagtcgt
      181 gaacgtgcgc tccggcagct gcggccacag catgtccagc ggcggtgtcc caaatattcg
      241 ttggtccgaa gcgcgggtac agctgcgcct gtccttccgc caccaggcag aatttcagcg
      301 aagagccgat ggacgtggtc tgatgttcgc caagctgttg cagatactct ttcagctccg
      361 catctgcatg ggaacggctg ataaccacca gcggcgggcg cgcatcgcgg acctgaatct
      421 gcttgcgcac accgcactct tctttccagg ccttgccttc tgccgcgctg tacattacgt
      481 tcattaccgg cgcatacacc acacctaaaa tcggtttgcc atggtcaatg agcgcaatgt
      541 taacggtgaa ttcgccattg cgtttaataa actctttagt accatccagc gggtctacca
      601 gccagtaacg ctgccagtgc tgacggactt cccaaccggg aggatcttct tcagaaagga
      661 ccggaatatc cggtgtcagc gtacgtaaac cgtccatgat aacggtgtgt gcggcaatat
      721 ccgctgccgt taccggagaa ttgtccgctt tgctgacgac gtccatcggt ttcgtcccgt
      781 cgtagacctg cataatggca tcgcctgcat tccgtgcaag ctggcatact tgatctaaca
      841 tttctccacc tcgtctctgt gagcggtgtt aacttattgt tttacttata ccctatcgtt
      901 aatgaatgcg ccaactgtga tagtgtcatc attttcaaag cgtaaaattg tggcattctt
      961 cactgttcta taagtaagac gtttattctc ccttttcttt cgtattcccg atgataaaag
     1021 gatgtccctg atgattaagt ttagcgcaac gctcctggcc acgctgattg ccgccagtgt
     1081 gaatgcagcg acggtcgatc tgcgtatcat ggaaaccact gatctgcata gcaacatgat
     1141 ggatttcgat tattacaaag acaccgccac ggaaaaattc ggactggtac gtacggcaag
     1201 cctgattaac gatgcccgca atgaagtgaa aaacagcgta ctggtcgata acggcgattt
     1261 gattcagggg agtccgctgg ccgattacat gtcggcgaaa ggattaaaag caggtgatgt
     1321 tcatccggtt tataaggcgc tgaatacgct ggattatacg gtcggtacac tcggcaatca
     1381 tgaatttaac tacggtctgg attacctgaa aaatgcgctg gcgggagcga aattccctta
     1441 tgtaaatgcc aacgtcattg acgccagaac caaacagcca atgtttacac cgtatttaat
     1501 taaagatacc gaagtggtcg ataaagacgg aaaaaaacag acgctgaaga ttggctatat
     1561 tggcgtcgtg ccgccgcaaa tcatgggctg ggataaagct aatttatccg gaaaagtgac
     1621 ggtgaatgat attaccgaaa ccgtgcgcaa atacgtgcct gaaatgcgcg agaaaggtgc
     1681 cgatgtcgtt gtcgttctgg cgcattccgg gctgtctgcc gatccgtata aagtaatggc
     1741 ggaaaactca gtttattacc tcagtgaaat tccgggcgtt aacgccatta tgtttggcca
     1801 tgctcacgcc gttttcccgg gtaaagattt tgctgatatc gaagaggctg atatcaccaa
     1861 aggcacgctg aatggtgttc cggcggtaat gccgggcatg tggggcgatc atcttggggt
     1921 ggtcgactta caactcagta atgacagcgg taaatggcag gtgacgcagg cgaaagcgga
     1981 agcacggccg atttacgaca tcgccaataa aaaatccctc gcggcggaag acagcaagct
     2041 ggtagaaaca ctcaaagccg atcacgatgc cacacgccag ttcgtcagca agccaatcgg
     2101 taaatctgcc gacaatatgt atagctatct ggcgctggtg caggacgatc cgaccgtgca
     2161 agtcgtgaac aacgcgcaaa aagcgtatgt cgaacattac attcagggcg atccggatct
     2221 ggcaaaactg ccggtgcttt cagctgccgc accgtttaaa gttggtggtc gcaaaaatga
     2281 cccggcaagc tatgtggagg tg
//
LOCUS       DADMHC010000311         2288 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.314, whole genome shotgun sequence.
ACCESSION   DADMHC010000311 DADMHC010000000
VERSION     DADMHC010000311.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2288)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2288)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2288
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.314"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..845)
                     /gene="ipaH9.8"
                     /locus_tag="JNZ57_004022"
     CDS             complement(<1..845)
                     /gene="ipaH9.8"
                     /locus_tag="JNZ57_004022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858359.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase
                     IpaH9.8"
                     /protein_id="HAY8830023.1"
                     /translation="MLPINNNFSLPQNSFYNTISGTYADYFSAWDKWEKQALPGEERD
                     EAVSRLKECLINNSDELRLDRLNLSSLPDNLPAQITLLNVSYNQLTNLPELPVTLKKL
                     YSASNKLSELPVLPPALESLQVQHNELENLPALPDSLLTMNISYNEIVSLPSLPQALK
                     NLRATRNFLTELPAFSEGNNPVVREYFFDRNQISHIPESILNLRNECSIHISDNPLSS
                     HALQALQRLTSSPDYHGPRIYFSMSDGQQNTLHRPLADAVTAWFPENKQSDVSQIWHA
                     FEHEE"
     gene            complement(1107..1202)
                     /locus_tag="JNZ57_004023"
                     /pseudo
     CDS             complement(1107..1202)
                     /locus_tag="JNZ57_004023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(1238..1543)
                     /gene="ccdB"
                     /locus_tag="JNZ57_004024"
     CDS             complement(1238..1543)
                     /gene="ccdB"
                     /locus_tag="JNZ57_004024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858358.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system toxin CcdB"
                     /protein_id="HAY8830024.1"
                     /translation="MQFKVYAYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSD
                     KVSRELYPVVHVGDESWRMMTTDMASVPIFVIGEEVADLSHRENDIKNAINLMFWGI"
     gene            complement(1545..1763)
                     /gene="ccdA"
                     /locus_tag="JNZ57_004025"
     CDS             complement(1545..1763)
                     /gene="ccdA"
                     /locus_tag="JNZ57_004025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin CcdA"
                     /protein_id="HAY8830025.1"
                     /translation="MKQRITVTIDSDSYQLLKSANVNISGLVNTAMQKEARRLRAERW
                     QAENQQGMAEIARFIEMNGSFADENRDW"
BASE COUNT          602 a          482 c          536 g          668 t
ORIGIN      
        1 tgctcttcat gttcaaaagc atgccatatc tgtgatacat cagattgttt gttttccggg
       61 aaccatgctg tcacggcatc agccaggggg cgatggagtg tattctgttg tccgtcactc
      121 atggagaagt aaatccgtgg gccgtggtag tccggcgaag aggttaatct ttgcagggct
      181 tgcagagcat gggatgataa tgggttatca ctaatatgta ttgaacattc attcctcaga
      241 ttaagaatgc tttccgggat atgacttatc tgatttctat caaaaaaata ctctctgaca
      301 acgggattat ttccctcaga aaatgctggt agctcagtga ggaaattacg ggtcgctctg
      361 agatttttaa gagcctgtgg gagcgatggt aaggagacta tttcgttata gctgatattc
      421 atagtcaata acgaatcggg taaagctggc aggttttcca gctcattgtg ttgtacctga
      481 agtgactcca gcgcaggagg tagcacgggc aattctgata atttattgct ggcggaatat
      541 aattttttta gcgtaacagg cagttcaggt aggttagtta attgattata tgatacattg
      601 agcagcgtta tctgagctgg taagttgtca ggtagcgagg acagatttaa acggtccagt
      661 cgaagttcat cggaattatt gataagacat tctttaagtc gggagacagc ctcatcacgc
      721 tcttcaccgg ggagcgcttg tttttcccat ttatcccatg ctgaaaagta atcagcatat
      781 gtaccggaaa tagtgttata aaaagaattt tggggcaatg aaaagttatt atttatcggt
      841 aacatgatgg gcatccagtt aaagccggtg gacaaatggc tttgttaaaa gaaataagta
      901 ggagttttta tgaagttcat tccatgaaat gaacttcagc acttttttat tataataagg
      961 ataaacaaaa ttggctgtaa aaaaacgata ctgtttcagt taaccgtgaa tggcctgttt
     1021 gcaccgtatt gttcttgttt ttcggttagt taaacatcgt acttcatatt tgaacggtaa
     1081 gcggctcgtc agaaccgtat tgatatttac tgagaggtca gatcaacttt ccagggcaac
     1141 agatcgcgta cccggtttgc cggccagtct tggatatgct caatgacgta acgcagccat
     1201 tttgtcaacg ccacgatttt tgaccctagc ctgacattta tattccccag aacatcaggt
     1261 taatggcgtt tttgatgtca ttttcgcggt ggctgagatc agccacttct tccccgataa
     1321 cgaagatcgg cacactggcc atatcagtgg tcatcatgcg ccagctttca tccccgacat
     1381 gcaccaccgg gtaaagctca cgggagactt tatctgacag caggcgggca ctggccaggg
     1441 ggatcaccat ccgtcgtccg ggcgtgtcaa taatgtcact ctgtacatcc acaaacaaac
     1501 gataacgact ctctctttta taggcgtaaa ccttaaactg catttcacca gtccctgttc
     1561 tcatcggcaa aagagccgtt catttcaata aaacgggcga tctcagccat cccctgctga
     1621 ttttcagcct gccagcgttc cgcacgcaga cggcgggcct ctttttgcat ggccgtattt
     1681 accaggcctg agatattcac gtttgcggat ttaagtaact gatagctgtc actgtctata
     1741 gtgacagtaa tacgctgctt catgataagc cctcaaaaac atacttatga tatgtatatg
     1801 agtatatatt aatggtacaa accatcaata tccataaaaa gtacaccatt aattcactat
     1861 aagtttttaa tacaattttt tctgctgcga tttttttata cgataattag catacttata
     1921 acaccgtaag taaattacat gaaagcaggc acagcgtgat ccgatttttc tgcgtataac
     1981 gattttccgg aagtgtaata cggttgcgcc ccgggccggg cacccttttc tgttgttgtg
     2041 tacgggccca cagagaatgg taccggaggc gggctcagaa gtactgagtc gggtgatcgc
     2101 gtcaggccgc gaagtactga cacgggtatt ggtgactggt gatgaagtac tgccccgggt
     2161 atgatttcag gctgattcag gttctgattc tctgtcagtc cgcgtggttg ctggcctggc
     2221 tgatttcctg ttgtcaggcg ttcaacaacc gactgcaggt tatagcccgg ttcacgaacc
     2281 acggcagc
//
LOCUS       DADMHC010000312         2275 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.315, whole genome shotgun sequence.
ACCESSION   DADMHC010000312 DADMHC010000000
VERSION     DADMHC010000312.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.315"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..349)
                     /locus_tag="JNZ57_004026"
     CDS             complement(<1..349)
                     /locus_tag="JNZ57_004026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inhibitor of g-type lysozyme"
                     /protein_id="HAY8830026.1"
                     /translation="MKIKSISKAVLLFALLTSTSFAAGKNVNVEFRKGHSSAQYSGEI
                     KGYDYDTYTFYAKKGQKVHVSISNEGADTYLFGPGIDDSVDLSRYSPELDRHGQYSLP
                     ASGKYELRVLQTRN"
     gene            591..884
                     /locus_tag="JNZ57_004027"
     CDS             591..884
                     /locus_tag="JNZ57_004027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309701.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830027.1"
                     /translation="MFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMKGFGQPQLAMIL
                     PLDGRKKLVNADIEKVKLALTEQGYYLQLPPPPEDLLKQHLSVMGQKTDDTNK"
     gene            956..1615
                     /locus_tag="JNZ57_004028"
     CDS             956..1615
                     /locus_tag="JNZ57_004028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HAY8830028.1"
                     /translation="MYQHHNWQGALLDYPVSKVVCVGSNYAKHIKEMGSAVPEEPVLF
                     IKPETALCDLRQPLAIPSDFGSVHHEVELAVLIGATLRQATEEHVRKAIAGYGVALDL
                     TLRDVQGKMKKAGQPWEKAKAFDNSCPLSGFIPAAEFTGDPQNTTLGLSVNGEQRQQG
                     TTADMIHKIVPLIAYMSKFFTLKAGDVVLTGTPDGVGPLQSGDELTVTFDGHSLTTRV
                     L"
     gene            1692..2153
                     /locus_tag="JNZ57_004029"
     CDS             1692..2153
                     /locus_tag="JNZ57_004029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415699.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HAY8830029.1"
                     /translation="MAEHLMNDVPFWQSKTLDEMSDAEWESLCDGCGQCCLHKLMDED
                     TDEIYFTNVACRQLNIKTCQCRNYERRFEFEPDCIKLTRENLPTFEWLPMTCAYRLLA
                     EGKDLPVWHPLLTGSKAAMHGERISVRHIAVKESEVIDWQDHILNKPDWAQ"
BASE COUNT          592 a          490 c          588 g          605 t
ORIGIN      
        1 cgtttcgggt ttgcagcact cgcagctcat atttgccaga agcagggagt gagtattgtc
       61 cgtgacgatc gagttctggg gaatatctgg ataaatcaac agaatcatcg attcctggcc
      121 cgaagaggta agtatcagcg ccttcattag agatactcac atgtactttc tgaccttttt
      181 tggcatagaa ggtatatgta tcgtaatcgt atccctttat ttcgccggag tactgagcgc
      241 tgctatggcc ttttctgaac tcaacattga cattcttacc cgcagcaaag ctcgtggagg
      301 ttagcagtgc aaacagtaat acagccttac tgatgctctt gattttcatt ggtagtctcc
      361 tgttcagaat gagtacgatg aactgttata atataacaat ccctaacggg agaattccag
      421 tggcttttct gcgttcggta aaatcccggc gcggcatttt ttgccggggg gattacttat
      481 aaaggggcat ggactcaaca aaccgcagaa atctacagct ggctggcttg tggcgcgggt
      541 ttcattgatg ttagcttatg ccaaaacctg gcatcttaaa gagtaaaagt atgttttgtg
      601 tgatttatcg aagcagcaag cgtgaccaga cctatttata tgtcgaaaaa aaagacgatt
      661 tttcgcgtgt tcctgaggaa ctgatgaaag gttttggtca gcctcagtta gcgatgattc
      721 tgccgttgga tgggcggaag aaactggtca atgctgatat tgaaaaggtt aaactggcat
      781 taaccgagca aggttactat ttgcagttac cgccaccacc cgaagatttg ctgaagcaac
      841 atctttccgt catggggcag aaaacagacg acacgaacaa ataaccgata tccggcggtg
      901 gcattatctt tgtcggcgcg ggttttcata tccacgataa ggtgagggga acgttatgta
      961 tcaacatcac aactggcaag gtgcgctgct ggattatccg gtgagtaaag tagtctgtgt
     1021 tggcagtaac tatgccaaac atattaaaga gatgggcagc gcagtgcccg aagagccagt
     1081 gctgtttatt aaaccagaaa cggcactgtg cgatctgcgg cagccattgg cgatcccatc
     1141 cgatttcggt tcagttcatc atgaagtcga actggcggtg ttgattggtg cgacgctgcg
     1201 tcaggcaacg gaagagcatg tccgcaaagc cattgccggt tacggcgtgg cgcttgatct
     1261 gacattgcgt gatgttcagg gaaaaatgaa gaaagccggg cagccgtggg aaaaggctaa
     1321 agcgtttgat aactcttgtc cgctttccgg gtttatcccc gcggcggaat ttaccggcga
     1381 tccacaaaat acaacgctgg gcctgagcgt aaacggcgaa caacgccagc aaggtacgac
     1441 tgcggacatg atccataaaa tcgttccgtt gatcgcttat atgagcaagt tttttaccct
     1501 caaggccggt gacgttgtgt tgacaggcac gcctgatggc gtcggcccgt tgcaaagcgg
     1561 tgatgagctg acagtcactt tcgatgggca ttctttgaca actcgcgttt tgtaatactt
     1621 tttgccgcct gaaagcggcg gcaaaacttg catcgctgtg ccagactggt tataaggtgc
     1681 gttttaacgt aatggcggaa cacctgatga acgatgtacc tttctggcaa agtaaaaccc
     1741 tggacgaaat gagcgatgcg gaatgggagt cgttgtgtga tggttgcggt cagtgttgcc
     1801 tgcataaact gatggatgaa gacaccgacg aaatctactt cactaacgtc gcctgtcgcc
     1861 agctcaatat taaaacctgt caatgtcgga actacgaacg tcgtttcgag tttgaacccg
     1921 actgcattaa attaacccgt gaaaatctgc caacattcga atggctgcca atgacctgcg
     1981 cttatcgttt gctggcggaa ggtaaagatt tacctgtgtg gcatccgcta cttactggtt
     2041 cgaaagcggc aatgcatggt gaacgtatct ctgtgcgtca tatcgcagtg aaagaatcag
     2101 aagtgattga ctggcaggat catatcttaa ataaacctga ctgggcgcag tgataaattt
     2161 aatagatgtt gatgggggct ttcttaatat acgtctggat gctcgccatt tcgtagccct
     2221 gtttttgaaa gcgctctgtc ataatgagag ttacccgata ccttattatc aacag
//
LOCUS       DADMHC010000313         2270 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.316, whole genome shotgun sequence.
ACCESSION   DADMHC010000313 DADMHC010000000
VERSION     DADMHC010000313.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2270)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2270)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2270
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.316"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            324..1976
                     /locus_tag="JNZ57_004030"
     CDS             324..1976
                     /locus_tag="JNZ57_004030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858318.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HAY8830030.1"
                     /translation="MIPLKKNITLIMFTLSLLTGNPAIAYETDKVYKITVLHTNDHHG
                     HFWRNNHGEYGLSSQKTLVDNIRQKVINNGGSVLLLSGGDINTGVPESDLQKAEPDIR
                     GMNLIGYDAMAVGNHEFDNPLNILRQQEKWATFPFLSANIYQKSTGRRLFSPWKIFIR
                     QNLKIAVIGLTTDDTAKTGNSEYFTDIEFRQPAAEARSVIDELNQQEKPDIIIAATHM
                     GHYDNGESGSNAPGDVEMARSLPTGSLAMIVGGHSQAPVCMASDNKKQWNYIPGTTCV
                     PDKQNGIWIVQAHEWGKYVGQADFEFCNGTMKLVNYQLHPVNLKMRITREDGKTEFSF
                     YTPEITEDPQMLSLLTPFQNKGKAQLDVKVGVVNGRLEGDRSKVRFVQTSMGHLILSA
                     LTERIDADFAVVSGGEIRDSIESGNITYKDILKVQPFGNTVVSIDLTGKEVADYLATV
                     AQMKPDSGAYPQFLNTSFVVKKGKIEMLKIKGKSVDLNKKYRMTTFSFNATGGDGYPR
                     IDNRPGYINTGFIDAEVLIEYIREHSPLDAASYEPKGEVSWQ"
     gene            complement(1987..2157)
                     /locus_tag="JNZ57_004031"
                     /pseudo
     CDS             complement(1987..2157)
                     /locus_tag="JNZ57_004031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          705 a          420 c          528 g          617 t
ORIGIN      
        1 tctccaggaa acttggggcg gttcacgtca gtatcagacc atattaattg ctgaaactga
       61 taaacatcaa accttataga agggtgaatg ctgaaagggg gctatggtga tcgacgtgat
      121 gacaacgaca ggtaagaccg tgacctgata aacctgaatt gtgtcctaga cataaagtcc
      181 gtgaagggaa taaggctcag gtaagtgaat cttatagtgg cccgcagctc tgactgcaat
      241 aaggccggat acagagcagc aactactcgt cgatgtcaga acaacggaag ccttgcaaac
      301 ggggatgcgt tcatacaggt acaatgatac cgttaaaaaa aaacattacg ctaataatgt
      361 tcaccctgtc attactgaca ggaaatcctg ctatagcgta tgaaacagat aaagtatata
      421 aaataaccgt tctgcataca aatgaccacc atggacactt ttggcgtaac aatcatggtg
      481 agtacgggtt atcctcccaa aaaactctgg tggacaatat ccggcagaaa gtaataaata
      541 atggcggaag tgttctatta ttatctggtg gtgatattaa caccggtgta cctgaatcag
      601 accttcagaa ggctgaaccc gatattcgtg gaatgaatct aattggttat gatgcaatgg
      661 ccgtcggtaa tcatgaattt gataatcctc taaatatatt acgtcagcag gaaaaatggg
      721 ccacatttcc tttcctttct gctaacatat atcaaaaaag tacagggagg cgtttattca
      781 gtccatggaa aattttcatc cgtcagaatt tgaaaattgc agtcattggc ttgacgacag
      841 atgatactgc gaaaacagga aattctgaat attttactga tattgagttc cgtcaacctg
      901 ctgctgaggc gaggagtgtc attgatgaac ttaatcagca ggaaaagcca gatattatta
      961 ttgcggcaac acatatgggt cactatgaca atggcgagtc aggttcgaat gctcctggtg
     1021 atgttgaaat ggctcgcagt ttgccgactg gctcattagc aatgattgtg ggaggacatt
     1081 cacaagctcc tgtctgcatg gccagcgata ataaaaaaca gtggaattat attccgggga
     1141 caacctgtgt accagataaa caaaatggca tctggattgt acaagcgcat gagtggggaa
     1201 aatatgtcgg tcaggctgat tttgaattct gtaacggtac aatgaaactg gttaattatc
     1261 agttacaccc agttaatctc aaaatgagaa ttaccagaga agatggaaaa acggaatttt
     1321 ctttttacac ccccgaaatt actgaagatc cacagatgtt atccttactg acaccattcc
     1381 agaataaagg caaagcacaa ctggatgtga aggttggggt tgtgaacgga cgtctggaag
     1441 gggacagaag taaagttcgt tttgttcaga ccagtatggg ccatctgatt ctgagcgctc
     1501 tgacagaacg tattgacgca gattttgctg ttgtcagtgg tggggaaatt cgagattcca
     1561 tagagagtgg taacatcaca tacaaagata tactgaaagt tcagccattt ggtaatacgg
     1621 tagtaagtat tgatttgacg gggaaagaag tagctgacta cctagctaca gtggcacaga
     1681 tgaaaccgga ttccggagcc tacccacaat ttttgaatac cagctttgta gtcaaaaaag
     1741 gaaaaatcga aatgctaaaa ataaaaggta aatcggttga ccttaacaaa aaatatcgta
     1801 tgacaacatt tagctttaat gctactggtg gggatggcta tccacgtatt gataatagac
     1861 ccggatacat aaataccgga tttattgatg ctgaagtact tatcgaatat atccgggaac
     1921 attcaccgct ggatgctgct tcatatgaac caaaaggtga agtcagttgg cagtgataac
     1981 gtaattgacg atcatcacgt gttttttgct gacagtcgct gtgactttgt gaaagtagtc
     2041 tctgcggatg tttgcgatat gggaatgcag ttgctgtatt ttgtgtttct gcttctgcca
     2101 gttgttgctg aatttaacct tgcggcttaa ctgatgttgg agcgctgcca gcttcttcgt
     2161 caatttcgct gattaaagtt tattcattat ggcatgatct gcgtaagcgg ctcgtcagaa
     2221 ccgtattgat atttactaag agctcagatc aactttccag ggcaacagat
//
LOCUS       DADMHC010000314         2238 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.317, whole genome shotgun sequence.
ACCESSION   DADMHC010000314 DADMHC010000000
VERSION     DADMHC010000314.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2238)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2238)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2238
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.317"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..689)
                     /gene="ipaH7.8"
                     /locus_tag="JNZ57_004032"
     CDS             complement(<1..689)
                     /gene="ipaH7.8"
                     /locus_tag="JNZ57_004032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase
                     IpaH7.8"
                     /protein_id="HAY8830031.1"
                     /translation="MFSVNNTHSSVSCSPSINSNSTSNEHYLRILTEWEKNSSPGEER
                     GIAFNRLSQCFQNQEAVLNLSDLNLTSLPELPNHISALIVENNKLTSLPKLPAFLKEL
                     NADNNRLSVIPELPESLTTLSVRSNQLENLPVLPNHLTSLFVENNRLYNLPALPEKLK
                     FLHVYYNRLTTLPDLPDKLEILCAQRNNLVTFPQFSDRNNIRQKEYYFHFNQITTLPE
                     SFSQLDSSYRI"
     gene            1018..1197
                     /locus_tag="JNZ57_004033"
                     /pseudo
     CDS             1018..1197
                     /locus_tag="JNZ57_004033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611684.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(1214..1904)
                     /locus_tag="JNZ57_004034"
                     /pseudo
     CDS             complement(1214..1904)
                     /locus_tag="JNZ57_004034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            1827..2078
                     /locus_tag="JNZ57_004035"
     CDS             1827..2078
                     /locus_tag="JNZ57_004035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001119656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830032.1"
                     /translation="MPGTTTAMSINFIGITARTMNSNGSHGKPQIPVDYQKLLSIEDI
                     TFCRNRWGNIGENALRRVAVGKKLSFFGSDRGGENAAII"
     gene            complement(2098..>2238)
                     /locus_tag="JNZ57_004036"
     CDS             complement(2098..>2238)
                     /locus_tag="JNZ57_004036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001395480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HAY8830033.1"
                     /translation="RLWQALHDTITRNHQCRSMWQLLKKVRHFMETVSPFPGGKHGLA
                     KV"
BASE COUNT          649 a          420 c          505 g          664 t
ORIGIN      
        1 ttaatcctgt aacttgaatc taattgtgaa aaactctccg gaagagtggt tatctgatta
       61 aaatgaaaat aatattcctt ttgtctgata ttgtttctat cagaaaattg aggaaaagta
      121 accagattat tgcgctgagc acagagaatt tccagtttat ccggtaagtc gggtaatgtt
      181 gtcagcctgt tataataaac atgtaaaaat ttcaattttt cgggaagagc cggtaagtta
      241 tatagcctgt tattttcaac aaataatgat gttaaatggt ttggcaaaac aggaaggttt
      301 tccagttgat tagaacgaac acttaaagtt gttaatgact caggaagttc tggtatcaca
      361 gaaagcctgt tattatcagc attaagttct ttgagaaatg caggcagctt tggcaatgat
      421 gttaatttat tattttctac aatcaaagca gaaatatggt ttggtaattc gggaagagac
      481 gtcaaattta ggtctgataa atttaatact gcttcttgat tctgaaagca ctgggagagt
      541 ctgttaaaag caatgcctcg ctcttccccg ggagaagagt tcttttccca ttcagtcagg
      601 attctcagat aatgttcatt actggttgag tttgagttaa tagaggggga gcaagaaact
      661 gatgagtgtg tattatttac agagaacata atgctagggc aaccttatat ttgtgagaat
      721 aaatatttaa aattgtatat ttatacaaat ttcacttacc atttccgata ttaagtttta
      781 atagtttcca ttttacacat aacagaagtt agttgtaatt tatttattga ggttttctat
      841 ggaattcttt ttttattgtg actgcagtca ataataacac tgaattcaac attccagtga
      901 gcaaggaaat gtaatccgag taagtatatt tgttttacat catattttag ccaagctcat
      961 ttattcctat tatagaatga taaattaaaa ttactgtaaa aaaacgatac acatttaata
     1021 cgagggaggc cggcagaaaa acggcttgcg gtaaggcagg cgaaatgtgt gccgcgaatg
     1081 aagtccttgt atgactggat aaagctccag aggaaaactt tgtcaaacca tgctgaaatg
     1141 gtaaaggcgt tcaactatat cctgaatcac tggaatgtac tgaatgagtt ttgccgggta
     1201 gtacttccaa tcattagaat atgtgctttt caatgaagga accgatgact ttttcgtgga
     1261 tttccacgga acgcgagaag cagattgttt tacgtgccag ccgcttgatg cgggggcgga
     1321 gggtcaggtt gttacgttca tacgttgcgt gaagattttg ccggtcaggt gtttctcctc
     1381 cggcacttct ctggcgtagc tgccccagtc atcgctggtc accatgccga tacagaacgg
     1441 agtcaacagg gctaacagtt cccgacaggt ctcatcattc cgtggcccgc aagtgtaagc
     1501 caacacaccg ccagttttag tgttgtacgc ataccagggc cagtgttgtt gcgccttgct
     1561 gccaacgaag cgccactgct catcaagttc acagataagg gcaacatcag cgtgagcgac
     1621 tggcgcagat gttatccgcc ggggcgagag ctttttaatg tccgtatgac ggtattaatg
     1681 ccgattttca gtgttctggc ggtataacag ccccctgcgc cgttatgtgc catttcaacg
     1741 atctgctcct taacgccgag ttttctggct tcataagagt aagtgagctg gaaaacacgt
     1801 ttacatgagc gacaacggaa acgctcatgc cgggaacaac tacggccatg tcgataaact
     1861 tcatcggaat tacagcgcgg acaatgaaca gtaacggtag tcatggaaaa cctcaaatac
     1921 cagtagatta ccagaaactt ctatcgattg aagacattac cttttgccgc aataggtggg
     1981 gtaacattgg tgaaaacgca ttacgccggg tggcagttgg aaaaaaatta tcttttttcg
     2041 gctctgatcg tggtggagaa aatgcggcaa taatctaaat agctgcgctt aataccgcta
     2101 cacttttgcc agcccatgtt tgcctccggg gaatgggctg acggtttcca taaaatggcg
     2161 aacttttttc aacagttgcc acattgagcg gcactgatga ttacgcgtta ttgtgtcgtg
     2221 aagtgcctgc catagccg
//
LOCUS       DADMHC010000315         2235 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.318, whole genome shotgun sequence.
ACCESSION   DADMHC010000315 DADMHC010000000
VERSION     DADMHC010000315.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.318"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            153..857
                     /locus_tag="JNZ57_004037"
     CDS             153..857
                     /locus_tag="JNZ57_004037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001706993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8830034.1"
                     /translation="MWFETGDNGNEYFKWRSRQSTTTKDLMTLKWDALNILVNAVING
                     SLGVGSTNALGGSSIVLGDNDTGFKQNGDGILDVYANSQRVFRFQNGVAIAFKNIQAG
                     DGKKFTLSSSNNFTKNATFNLWGASTRPVVAELGDEAGWHFYSQRNTDNSVIFSVNGQ
                     IQPSNWGNFDSRYVKDVRLGTRVVQLMARGGRYEKAGHAITGLRIIGEVDGDDEAIFR
                     PIQKYINGTWYNVAQV"
     gene            861..1388
                     /locus_tag="JNZ57_004038"
     CDS             861..1388
                     /locus_tag="JNZ57_004038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001762409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8830035.1"
                     /translation="MQHLKNIKSGNPKTKEQYQLTKNFDVIWLWSEDGKNWYEEVNNF
                     QDDTIKIVYDENNIIVAITKDASTLNPEGFSVVEIPDITANRRADDSGKWMFKDGTVV
                     KRIYTADEQQQQAESQKVALLSEAESVIQPLERAVGLNMAMDEERTRLESWERYSVLV
                     SRVDTANPEWPQKPE"
     gene            complement(1417..1950)
                     /locus_tag="JNZ57_004039"
     CDS             complement(1417..1950)
                     /locus_tag="JNZ57_004039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000972171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8830036.1"
                     /translation="MMHLKNITAGNPKTKEQYQLTKQFNIKWLYSDDGKNWYEEQKNF
                     QPDTLKMVYDHNGVIICIEKDVSAINPEGASVVELPDITANRRADISGKWLFKDGVVI
                     KRTYTEEEQRQQAENEKQSLLQLVRDKTQLWDSQLRLGIISDENKQKLTEWMLYAQKV
                     ESTDTSSLPVTFPEQPE"
     gene            complement(1953..>2235)
                     /locus_tag="JNZ57_004040"
     CDS             complement(1953..>2235)
                     /locus_tag="JNZ57_004040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000108509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8830037.1"
                     /translation="ELGWSDFYTTTRKPSAGDVGAYTRAECNSRFITGIRLGGLSSVQ
                     TWNGPGWSDRSGYVVTGSVNGNRDELIDTTQARPIQYCINGTWYNAGSI"
BASE COUNT          639 a          464 c          508 g          624 t
ORIGIN      
        1 taaacagggc tggtaacgcc gtgcaaaaaa atggcgatac cttgtccggt gggcttactt
       61 ttgaaaatga ctcaatcctt gcctggattc gaaatactga ctgggcgaag attggattta
      121 aaaatgatgc cgatggtgac actgattcat acatgtggtt tgaaacaggc gacaacggca
      181 atgaatattt caaatggaga agccgccaga gcaccacaac aaaagacctg atgacgctga
      241 aatgggatgc actaaatatt cttgttaatg ctgtcattaa tggcagtctt ggagttggtt
      301 cgacgaatgc gttaggtggt agctctattg ttcttggtga taatgacacc ggatttaaac
      361 agaatggaga cggtattctg gatgtttatg ctaatagtca gcgtgtattc cgctttcaga
      421 atggagtggc tattgctttt aaaaatattc aggccgggga tggtaaaaaa ttcacgctat
      481 ccagctccaa caacttcaca aagaatgcaa cgtttaattt atggggtgct tcaacccgtc
      541 cagtagttgc agagttaggc gatgaggcag gatggcattt ctatagccag cgaaatacag
      601 ataactcggt aatattttct gttaacggtc agatacagcc cagcaactgg gggaattttg
      661 attcacgcta tgtaaaagat gttcgcctgg gtacgcgtgt tgttcaattg atggcgcgtg
      721 gtggtcgtta tgaaaaagcc ggacacgcaa ttaccggatt aagaatcatt ggtgaagtag
      781 atggcgatga tgaagccatc ttcagaccaa tacaaaaata catcaatggc acatggtata
      841 acgtcgcaca ggtgtaaatt atgcagcatt taaaaaatat taagtccgga aatccaaaaa
      901 caaaagaaca atatcagcta acaaagaatt ttgatgttat ctggttatgg tcagaagacg
      961 gtaaaaactg gtatgaggaa gtaaataact ttcaggacga caccataaag attgtatacg
     1021 acgaaaataa tattattgtt gccataacca aagatgcctc aacgcttaat cccgaaggct
     1081 ttagtgtcgt tgagattcca gatataacag ccaatcgtcg cgccgatgat tcagggaagt
     1141 ggatgtttaa ggacggaact gtggttaagc ggatttatac agcagacgaa cagcaacaac
     1201 aggccgaatc acaaaaggtc gcgttgcttt ctgaagctga aagcgttatt cagccactgg
     1261 aacgcgctgt cgggctgaat atggcgatgg atgaggaacg cacacgactg gagtcatggg
     1321 aacgctacag cgttctggtc agccgtgtgg atacagcaaa tcccgaatgg ccacaaaagc
     1381 ctgagtaaaa attaaggccc aatatcgggc cttctctcat tctggttgtt cgggaaacgt
     1441 tactggcagg ctggaggtgt ctgtagattc gactttctgc gcatagagca tccactcggt
     1501 taatttttgt ttattctcgt cggaaatgat gcccagccgt agctgtgagt cccatagctg
     1561 ggttttatcc ctgacaagtt gcaacaggct ttgcttttca ttttccgctt gttgcctctg
     1621 ctcttcctcg gtataagttc gctttatcac tacgccatct ttgaacaacc atttccccga
     1681 aatatcagcc cggcgatttg ctgtaatatc aggtaattca acgacgcttg cgccttccgg
     1741 attaattgct gaaacatcct tttcaataca aataataacg ccgttatggt catagaccat
     1801 tttcaaagtg tctggctgga aattcttttg ctcctcatac cagttttttc catcatctga
     1861 ataaagccat ttgatgttaa attgctttgt tagctggtat tgctcttttg ttttagggtt
     1921 gccagcagta atgtttttta agtgcatcat cgttaaatac tccccgcgtt ataccacgtc
     1981 ccattaatgc aatactgaat tggccttgcc tgtgttgtat caattaattc atcacggttt
     2041 ccgttaactg aacccgtaac gacataacct gacctgtcag accagccggg accattccat
     2101 gtctgaacag atgacagacc gccaaggcga atacctgtaa taaaccttga gttacattct
     2161 gcccgcgtat atgcaccaac atctcccgct gaaggttttc gtgtcgtggt atagaaatct
     2221 gaccaaccta attca
//
LOCUS       DADMHC010000316         2176 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.319, whole genome shotgun sequence.
ACCESSION   DADMHC010000316 DADMHC010000000
VERSION     DADMHC010000316.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2176)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2176)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2176
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.319"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..374
                     /locus_tag="JNZ57_004041"
     CDS             <1..374
                     /locus_tag="JNZ57_004041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001743492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8830038.1"
                     /translation="RPNFPYEFKIALVEQSLQPGACVAQIARENGINDNLLFNWHHQY
                     RKGGLLPSGKNMPALLPVTLTPEPDNKIPAPAQEPEQINTPSDSLCCELVLPAGTLRL
                     KGKLTPALLQILIREIKGSSH"
     gene            374..721
                     /gene="tnpB"
                     /locus_tag="JNZ57_004042"
     CDS             374..721
                     /gene="tnpB"
                     /locus_tag="JNZ57_004042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000624623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HAY8830039.1"
                     /translation="MISFPAGSRIWLVAGITDMRNGFNGLASKVQNVLKDDPFSGHLF
                     IFRGRRGDQIKVLWADSDGLCLFTRRLERGRFVWPVTRDGKVHLTPAQLSMLLEGIDW
                     KHPKRTERAGIRI"
     gene            741..1895
                     /locus_tag="JNZ57_004043"
                     /pseudo
     CDS             741..1895
                     /locus_tag="JNZ57_004043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            1899..2058
                     /locus_tag="JNZ57_004044"
                     /pseudo
     CDS             1899..2058
                     /locus_tag="JNZ57_004044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          527 a          578 c          601 g          470 t
ORIGIN      
        1 ggcggcctaa ttttccttat gaatttaaaa tcgccttagt ggagcagtca ctgcagcccg
       61 gagcctgtgt ggcgcagatc gcccgtgaaa acggaatcaa cgataacctg ctcttcaact
      121 ggcaccatca ataccggaaa ggtggcctgc tgccttccgg aaaaaatatg cctgcactgc
      181 ttcccgtgac gttaacgccg gagccggata ataaaatccc ggctccggca caggaaccag
      241 agcagataaa tacaccgtcc gacagtctgt gctgtgagct ggttctgccg gccggaactc
      301 tcaggcttaa aggtaaactg acgccggcgt tattacagat acttatccgc gaaataaaag
      361 ggagcagcca ctgatgatat ctttccctgc aggttcgcgt atctggctgg ttgcaggtat
      421 caccgatatg cgaaatggct ttaacggtct ggcctcaaaa gttcagaacg tcctgaagga
      481 tgacccgttc tccgggcatc tgttcatctt ccgcggacgc cggggtgacc agataaaagt
      541 gttgtgggct gacagtgacg gactgtgcct ctttaccaga cgcctggagc ggggccgctt
      601 cgtctggccg gtcacccgtg acggcaaggt gcaccttact ccggcccagt tatccatgct
      661 tcttgagggc atcgactgga aacacccgaa acgaacggaa cgcgctggca tccgcatata
      721 acccgttgta aagtgaggat atggacacct cacttgctca tgagaatgcc cgcctgcggg
      781 cactgttgca gacgcaacag gacaccatcc gccagatggc gaaatacaac cgcctgctct
      841 cacagcgggt ggcggcttat gcttccgaaa tcaaccggct gaaggcgctg gttgcgaaac
      901 tgcagcgcat gcagttcggt aaaagctcag aaaaacttcg cgcaaaaacc gaacggcaga
      961 tactggaagc acaggagcga atcagcgcac ttcaggaaga aatggcggaa acgctgggtg
     1021 agcaatatga cccggtactg ccatctcccc tgcgccagtc ttcagcccgt aaaccgttac
     1081 ctgcctcact tccccgtgaa acccgggtca tccgtccgga agaggaatgc tgcccggcct
     1141 gtggtggcga actcagttct ctgggatgtg atgtgtcaga gcagctggag cttatcagca
     1201 gcgcctttaa ggttatcgaa acacaacgtc cgaaactggc ctgttgccgg tgtgaccata
     1261 tcgtgcaagc accggtgcct tcaaaaccca ttgcacgcag ttatgccgga gcggggcttc
     1321 tggcccatgt tgtcgctgga aaatatgcag actatctgcc gttataccgc cagtcagaaa
     1381 tataccgtcg tcagggcgtg gagctgagcc gtgccacact gaggcgctgg acaggtgctg
     1441 ttgctgaact gctggaaccg ctgtatgaca tcctgcgcca gtatgtgctg atgcccggta
     1501 aagtccatgc cgatgatatc cccgttccgg tccaggagcc gggcagcggt aaaacaagga
     1561 ctgcccggct gtgggtctac gttcgtgatg accgtaacgc cggttcggaa atgcctccgg
     1621 cggtctggtt cgcgtactca ccggaccgga aaggtatcca tccacagaat catctggccg
     1681 gttacagcgg agtgcttcag gccgatgctt acggtggtta ccgggcgttg tacgaatccg
     1741 gcagaataac ggaagccctg ctgcgtatcg gtgaactgta tgccatcgag gcagaagtcc
     1801 ggggatgttc agcagaacag cgtctggcgg caagaaaagc cagagccgcg ccactgatgc
     1861 agtcattgta tgactggata cagcaacaga tgaaaattca ttcgctgaaa atggaatgtc
     1921 tccacggaga acactattat ccatcgggaa atagtgcggg caacagtgtt tagttatatc
     1981 gagtgcgatt acaatcgctg gcgacggcac cgttggtgtg gtggtctcag tccggaacaa
     2041 tttgaaaacc agagcctcac ttacgactgt gtccatatta tgtgggtagg atcaataaag
     2101 acgttttata tgtgtctgct tgcagccaga aaatttatac cctgcaggta tcataaacat
     2161 gcttgacaac ttaatt
//
LOCUS       DADMHC010000317         2171 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.320, whole genome shotgun sequence.
ACCESSION   DADMHC010000317 DADMHC010000000
VERSION     DADMHC010000317.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2171)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2171)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.320"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..849)
                     /locus_tag="JNZ57_004045"
     CDS             complement(<1..849)
                     /locus_tag="JNZ57_004045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858398.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HAY8830040.1"
                     /translation="MIKSTNIQAIGSGIMHQINNIYSLTPFPLPMELTPSCNEFYLKA
                     WSEWERNGTPGEQRNIAFNRLKICLQNQEAELNLSELDLKTLPDLPPQITTLEIRKNL
                     LTHLPDLPPMLKVIHAQFNQLESLPALPETLEELNAGDNKIKELPFLPENLTHLRVHN
                     NRLHILPLLPPELKLLVVSGNRLDSIPPFPDKLEGLALANNFIEQLPELPFSMNRAVL
                     MNNNLTTLPESVLRLAQNAFVNVAGNPLSGHTMRTLQQITTGPDYSGPRIFFSMGSSA
                     TISAPEH"
     gene            complement(1238..1506)
                     /locus_tag="JNZ57_004046"
                     /pseudo
     CDS             complement(1238..1506)
                     /locus_tag="JNZ57_004046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001449236.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1615..1838)
                     /locus_tag="JNZ57_004047"
                     /pseudo
     CDS             complement(1615..1838)
                     /locus_tag="JNZ57_004047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          625 a          367 c          459 g          720 t
ORIGIN      
        1 gtgttctgga gcggaaattg tggcagaact tcccatagag aaaaatattc gaggaccaga
       61 ataatctggt ccggtggtta tttgttgtag tgtacgcatg gtatggccag acagtggatt
      121 acctgcaaca tttacgaagg cattctgagc taatctcagg acactttccg gaagtgttgt
      181 cagattatta ttcattagca cagccctgtt catactaaaa ggtaattccg gtagttgttc
      241 tataaaatta ttagccagag ccagcccttc aagcttatct ggaaaggggg gaatgctgtc
      301 taatctgttt ccagaaacta ccagtaattt tagttccggt ggcaatagtg gcagaatatg
      361 caatcggtta ttatgaaccc gtaaatgagt tagattttca ggaagaaatg gtaattcttt
      421 tatcttgtta tcacccgcat taagctcttc taacgtctcg ggtaaggcag gtaagctttc
      481 cagttgatta aattgagcat gtattacctt aagcattggt ggtaaatcag ggagatgtgt
      541 taataggttt tttcttattt ccagtgttgt tatctgaggc ggtaaatctg gtaatgtttt
      601 taaatctaac tcagataaat ttaattctgc ctcttgattt tgtaaacata ttttcagcct
      661 attgaaggcg atattgcgtt gctcgcctgg ggtaccgttc ctttcccatt cactccaggc
      721 ttttaaataa aattcattac aagatggagt cagttccata ggtaaaggaa atggagttaa
      781 cgagtatata ttgtttattt gatgcataat accagaaccg attgcctgta tattggttga
      841 tttaatcatt ataactaaaa tttcttatca acgataagaa ttctagtgaa atagaatata
      901 gcttattaat tttaaaacag tttgctttgt accctttctc cgggtattgc tttcccccta
      961 agccgtctat gagaaggagt ctgctgttat tcctgagaat ggtaattcag ccataaaaag
     1021 gtatttaagg tcattgcgtc tctccctgta ctcgaataat ggtgaagaaa gcatgatgaa
     1081 tatatcacga taacgttcag tacgtatcga ggatagatgg agttactcct ctctgaaata
     1141 gaattactgc tctatttttt tctgttttca gaagttatta gtaacaaacc ctaatatatt
     1201 ttttgaaaat agagcttaaa cgagcctgaa attaacttca gaaatcagaa taccgttggc
     1261 tttgtttttc atcaattccg gcttcattta tctttgtcaa ccattgtatt tctgtagctg
     1321 tgaatttcaa ctttttcgtt cggttggtag caggtatttg caattcgtat atagctgttt
     1381 ttgtttatta aaaacagtac atccatctgt agtaacagta gaagatacta atatagtatt
     1441 tgatacttca gggatgatat tttcttgttt tttgggaaga caagggaata tagtttgtgt
     1501 aagcatatta cttccttata ttatattttg gtaaaaaatt tattttttta cattatagtc
     1561 ggctaaatga agtttactgt aaaaaaacga tactttttcg ggtggcgctt ccaatcagta
     1621 gaatatgtgt ttttcaatga aggagccgat gacttttcgt ggatttccac ggaacgcgag
     1681 aagcagattg ttttacgtgc cagccgcttg atgcgggtgc ggagggtcag gttgttacgt
     1741 tcaagatata gcatgtgctg gatgaagatc ccttttctgg tcacctgttt atctttcgtg
     1801 gccgacgggg tgacactgtt aaaatgtaat gaacgcatcc cacacaatta aacacggagt
     1861 agtatgatgg ttaaaagggt gaaactggca ggtgtggagc ctcgcagctt tccggcatca
     1921 tactgcccaa tacgggatgc ataaagcgtc ctcagactgg agactccaca aatgaaatat
     1981 acaccggttg gcgttgatat ggcaaaacat gtcattcaga ttcacttcat caatgagcac
     2041 atgtcagcgc cagtgatata agacggtaat ggggatgcgg acgatttcct ggactctcag
     2101 aagatgaaac atgtttactg aagaacaaaa aatttgcgct attgagcttt atttcaaata
     2161 tggtaagaag c
//
LOCUS       DADMHC010000318         2137 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.321, whole genome shotgun sequence.
ACCESSION   DADMHC010000318 DADMHC010000000
VERSION     DADMHC010000318.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2137)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2137)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2137
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.321"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(148..417)
                     /locus_tag="JNZ57_004048"
     CDS             complement(148..417)
                     /locus_tag="JNZ57_004048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8830041.1"
                     /translation="MLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEHIAPLQD
                     AVDLEIATEEENSLLEAWKKYRVLLNRVDTSTAPDIEWPEEPDTM"
     gene            474..1142
                     /locus_tag="JNZ57_004049"
     CDS             474..1142
                     /locus_tag="JNZ57_004049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HAY8830042.1"
                     /translation="MVKLMKKNTDDGAKIYTPLTLKLYDWWVLGVSNRLAWGCPTKEH
                     LLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNEASLNAASKRAGESKIKHK
                     ISHDVFEPYPAALHGQFDSISMFYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATI
                     LGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSA
                     SGKK"
     gene            1458..>2137
                     /locus_tag="JNZ57_004050"
     CDS             1458..>2137
                     /locus_tag="JNZ57_004050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005105549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HAY8830043.1"
                     /translation="MLPVNNPPLSTGNVSFYRTTSIDNVHNNYLSEWVEWTKNSISGE
                     NRETAFTRLQLCLENSETSLDLSCLGLRSLPRLPDNLDEINVSNNQLSMLPELPRALK
                     ELNASSNQLSALPELPVSLEYINVSDNHLFALPELPASLEYINVSDNHLSVLPRLPMS
                     LELLDAARNALEVIPDFPERDDHIIRIFWLNQNRITAIPESILGLSSDSVVNLRENQL
                     SPRIMQTL"
BASE COUNT          641 a          463 c          398 g          635 t
ORIGIN      
        1 ccgttttgcc tgtgtgttga ataattccac tgcagttata taaaatcggt aacggctgga
       61 aatcattcaa tactcgcact atcgaaagtt caccagccaa ccgcagcacg tcctgcatac
      121 gtcgtgtctg cggtttttct ttttcgctta cattgtgtct ggttcttccg gccactcaat
      181 atcaggtgca gttgatgtat caacacggtt cagcaacacc cgatacttct tccaggcttc
      241 cagcaacgag ttttcttcct ccgttgcgat ctccagatct acagcatcct gaagtggcgc
      301 aatatgctca ctgaattcct ggatgtagaa ctgtgtggtg acggtcttcc agccattcgg
      361 ctcctgctgt atcgaagcat accaggctat ttcaatatcg ctatgctgcg gcagcattta
      421 accccttgta attcatcgcc ataattgatt taattcacaa ataaaactat aatatggtga
      481 aattaatgaa aaaaaacaca gatgatgggg ctaaaattta cacaccactt accctaaagc
      541 tttatgactg gtgggttttg ggagtatcaa atcggcttgc atggggatgt cctacaaagg
      601 aacaccttct tccacacttt ctggaacatt taggtaacaa ccatctggat attggtgttg
      661 gaactgggtt ttaccttact catgtacctg agagtagtct gatatcttta atggatttga
      721 acgaagctag cctgaacgcg gcatctaaaa gggctgggga atcaaaaatt aaacataaaa
      781 ttagccatga tgtttttgaa ccttatcccg cggcgttaca tggtcaattt gattccattt
      841 ccatgtttta ccttcttcac tgcctgcctg gaaatatatc tacaaaaagc tgtgtaatac
      901 gcaatgcggc gcaggcctta actgacgatg gaactctata cggagccaca attcttggcg
      961 atggagttgt gcacaatagc ttcggtcaaa aactgatgcg catttacaat cagaaaggca
     1021 tcttttcaaa cacaaaagat tccgaagaag gcttaacaca tattctctca gagcatttcg
     1081 agaatgttaa aaccaaggtt caaggtactg tagtaatgtt ttccgcttca gggaaaaaat
     1141 agcatccaac cgcagcacgt tcttgcttaa gacgtgctac ggtttccttt acgatttggg
     1201 gttgcgactt tacctctatt gataatgcat tccggcagaa cgttcaaata tgaacgtacg
     1261 atatttaact aaccgaaaaa caaaatatag cacaggcgag acatttacca tctaagaaaa
     1321 tagtatcgtt tttttacagt taaatcaaca tcacttcctt aaaatgaaaa caataaattt
     1381 caatcctgaa atattttatt ttagcttatt atttcccagt atcacatttt atcaggatat
     1441 ccttctgcga ggttattatg cttcctgtaa ataatccccc cctatccact ggaaacgtct
     1501 ctttttacag aactacatca atcgacaatg ttcacaataa ttatctctcc gaatgggttg
     1561 aatggactaa aaacagcatt tccggagaaa acagggaaac tgcttttacc cggctccaat
     1621 tatgtctgga gaacagtgaa acatcgttgg acttatcttg tttaggtctc agatctctac
     1681 cacgattgcc tgacaatctt gatgaaatta atgtaagcaa taaccaacta tcaatgctcc
     1741 ccgagctacc aagggcattg aaagagctga atgcaagcag taatcaatta tctgcacttc
     1801 ctgaattacc agtgtcgctg gaatatataa atgtgagtga taaccatttg ttcgcacttc
     1861 ctgaattacc tgcgtcacta gaatatatta atgtaagtga caatcacctg tctgtacttc
     1921 cgaggttacc aatgtcattg gaattacttg atgcagccag aaatgctttg gaagtaatac
     1981 cagattttcc agaaagagat gatcatatta taagaatatt ctggcttaat cagaaccgga
     2041 tcacggcaat tccggaaagc atacttggcc tcagttctga tagcgttgtc aatcttagag
     2101 aaaatcaact atctcccaga ataatgcaaa ctttgtt
//
LOCUS       DADMHC010000319         2106 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.322, whole genome shotgun sequence.
ACCESSION   DADMHC010000319 DADMHC010000000
VERSION     DADMHC010000319.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2106)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.322"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            1..897
                     /locus_tag="JNZ57_004051"
     CDS             1..897
                     /locus_tag="JNZ57_004051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417396.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8830044.1"
                     /translation="MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEE
                     QIGYTLFTRKDNNISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNT
                     YPTIIFDQLISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELEN
                     LTISELPPLRLGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGIN
                     PTIIYRPYSFMAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSI
                     RNHRYTATMLQHIAEDRDGTNH"
     gene            complement(894..>2106)
                     /gene="scpC"
                     /locus_tag="JNZ57_004052"
     CDS             complement(894..>2106)
                     /gene="scpC"
                     /locus_tag="JNZ57_004052"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="propionyl-CoA:succinate CoA transferase"
                     /protein_id="HAY8830045.1"
                     /translation="GLRKKINQGAVSFVDLHLSEVAQMVNYGFFGDIDVAVIEASALA
                     PDGRVWLTSGIGNAPTWLLRAKKVIIELNHYHDPRVAELADIVIPGAPPRRNSVSIFH
                     AMDRVGTRYVQIDPKKIVAVVETNLPDAGNMLDKQNPMCQQIADNVVTFLLQEMAHGR
                     IPPEFLPLQSGVGNINNAVMARLGENPEIPPFMMYSEVLQESVVHLLETDKISGASAS
                     SLTISADSLRKIYDNMDYFASRIVLRPQEISNNPEIIRRLGVIALNVGLEFDIYGHAN
                     STHVAGVDLMNGIGGSGDFERNAYLSIFMAPSIAKEGKISTVVPMCSHVDHSEHSVKV
                     IITEQGIADLRGLSPLQRARTIIDNCAHPMYRDYLHRYLENAPGGHIHHDLSHVFDLH
                     RNLIATGSMLG"
BASE COUNT          543 a          525 c          506 g          532 t
ORIGIN      
        1 atggacattt ttatttcgaa aaagatgcgc aatttcattt tattagcgca aaccaataat
       61 attgcccggg cggcagaaaa aatccatatg acggcttcgc catttggtaa aagcattgcc
      121 gcgctggaag aacaaattgg ctatacgcta tttacccgca aagataataa tatcagcctc
      181 aataaagccg gtcaggaact gtatcaaaaa ctgttcccgg tttatcaacg actttctgcg
      241 attgataatg aaatccataa ctcagggcgt cgttcacgag aaattgtgat tggcatagat
      301 aatacttatc cgacaattat tttcgatcag ttgattagtc tcggagataa gtatgaaggc
      361 gtgaccgccc agccagttga gttcagcgaa aacggcgtta tcgataatct ttttgaccgt
      421 cagttagatt ttattatctc cccacagcat gtatctgcac gagttcagga actggaaaac
      481 ctgactatca gtgaattacc accgctgcga ttgggctttc tcgtttctcg ccgttatgaa
      541 gagcgtcaag agcaagagct gcttcaggag ctgccctggc tacaaatgcg ctttcaaaac
      601 cgggctaact tcgaagcaat gattgatgcg aatatgcgac cttgtgggat caatcccacc
      661 attatttatc gtccctacag ttttatggcc aaaatcagcg ccgtggagcg cggacatttt
      721 ctgacggtga tcccgcattt tgcctggcga ctggtgaatc cggcaacgct gaaatatttt
      781 gatgcgccgc acaggccgat gtatatgcag gaatatcttt attcaatcag aaatcatcgt
      841 tataccgcca cgatgcttca gcatattgct gaagatcgtg acgggacaaa ccattaaccc
      901 agcatcgagc cggttgcaat taaattacgg tgtaagtcga agacgtggct aagatcgtgg
      961 tgaatatgtc cgccgggcgc attttccaga tagcgatgca gataatcccg atacatagga
     1021 tgtgcacaat tatcaatgat agtgcgggcg cgttgaagcg gggaaagacc gcgcagatcg
     1081 gcgatccctt gttcggtgat gatcactttg acgctgtgtt cgctgtgatc aacatggctg
     1141 cacattggca cgacggttga gatcttgcct tctttagcaa tcgacggagc cataaagatc
     1201 gacagatacg cgttgcgttc aaaatcaccg ctgccgccga tgccgttcat cagatcgacc
     1261 ccggctacgt gcgttgaatt tgcatgcccg taaatatcaa actctaggcc gacgttcaga
     1321 gcgatgacgc ccagacgacg gatgatttcc gggttattgg aaatctcctg cggacgcaac
     1381 acaatgcggc tggcaaagta atccatattg tcgtaaatct tgcgcaggga atcggccgag
     1441 attgtcaggc tggaggcgct ggccccgctg attttgtcgg tttccagtaa atgcaccacc
     1501 gattcctgta gcacttccga atacatcatg aacggaggaa tttccgggtt ttcccccaga
     1561 cgcgccatta ccgcattatt gatattgccc acgccacttt gcagcggcag aaattccggc
     1621 ggaatacgcc catgcgccat ttcctgcaat aagaacgtga ccacgttatc ggcaatctgc
     1681 tggcacatgg gattttgctt atccagcata ttaccggcgt cgggcaagtt ggtttctacg
     1741 acggcgacaa tctttttcgg atcgatttgc acatagcggg taccgacgcg atccattgca
     1801 tggaagatcg acacgctatt gcgccgcggt ggcgcgccag gaatcacaat atctgccagt
     1861 tctgcaacgc gcggatcgtg atagtgatta agttcaatga tcactttctt cgctcgcagc
     1921 agccaggtcg gcgcattacc gatcccgctg gttaaccaga ctcgaccatc cggtgccagt
     1981 gccgatgctt caatgacggc aacatcaatg tcgccgaaga aaccgtaatt gaccatttgc
     2041 gccacttcgc tcaaatgcag gtcaacgaaa ctcaccgcgc cctgattgat ctttttacgt
     2101 aaaccg
//
LOCUS       DADMHC010000320         2103 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.323, whole genome shotgun sequence.
ACCESSION   DADMHC010000320 DADMHC010000000
VERSION     DADMHC010000320.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2103)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2103)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2103
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.323"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(1..458)
                     /locus_tag="JNZ57_004053"
                     /pseudo
     CDS             complement(1..458)
                     /locus_tag="JNZ57_004053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707428.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(460..738)
                     /locus_tag="JNZ57_004054"
     CDS             complement(460..738)
                     /locus_tag="JNZ57_004054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830046.1"
                     /translation="MAHDTKFYNSDNSAAPASRHGRRSHAFKSDWYQHDPCTEEQAEW
                     LIQRYRRHGYEIKKALSLDYRHWIIFVRLPYSERPPRPSCTFQQRIWR"
     gene            679..864
                     /locus_tag="JNZ57_004055"
     CDS             679..864
                     /locus_tag="JNZ57_004055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830047.1"
                     /translation="MPAGRGGRVIRIVKFGIVRHLFSLLAQQVPVVQADGWIVNQNDQ
                     KKQNPPKRVKCGCVEDA"
     gene            complement(906..1118)
                     /locus_tag="JNZ57_004056"
     CDS             complement(906..1118)
                     /locus_tag="JNZ57_004056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Hok family toxin"
                     /protein_id="HAY8830048.1"
                     /translation="MLNTCRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVT
                     RKDLCEVRIRTGQTEVAVFTAYEPEE"
     gene            complement(1321..1539)
                     /locus_tag="JNZ57_004057"
     CDS             complement(1321..1539)
                     /locus_tag="JNZ57_004057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830049.1"
                     /translation="MFKCYCTLIVGGIMKNALQFLFVAFWLFASCMPIIFTARYMEKI
                     DVLILMFGHINALFLGVFMAVMCIEYWR"
     gene            complement(1713..2047)
                     /locus_tag="JNZ57_004058"
                     /pseudo
     CDS             complement(1713..2047)
                     /locus_tag="JNZ57_004058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707879.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          518 a          539 c          484 g          562 t
ORIGIN      
        1 attgcgtgac cgatgacgtc aatcatccat gctgacaggt tttgatgagc aagttgctcg
       61 agtgattcgg atgtctggtc acgcaactgg ttgtcgcagt gccagcacaa caccattgcg
      121 ccggtaccat aacggtgaat gacggtttcg ctgtgattat aatcgccgtg tggccactgg
      181 caggatttaa tatggcgcaa cagccagtca gacaatgcac cagcaccacc agcagcacga
      241 atcacccgtg cgttactgaa aaacggcagc tatgttttgt cttccactag cggctggcga
      301 acggcaggaa cgaccccgga cggcagatta cgcatgcttt tcggttccgg ctccaccagt
      361 acccgggtat tgtggaatac cggcatggat tcacggcctg gcttaaggac caccagcccg
      421 agttccggaa ccagaacagg tcgaagtaat acccgcacat tacctccaga tccgttgctg
      481 gaatgtgcag gacggacgcg gtggccgttc ggaataaggg agcctgacga agattatcca
      541 gtgacgataa tcgagactga gggctttctt aatctcgtat ccgtgtctgc ggtagcgctg
      601 aatcagccat tcagcctgtt cttcggtgca ggggtcgtgc tgataccagt cagatttgaa
      661 tgcatgagaa cgccgcccgt gcctgctggc aggggcggca gagttatccg aattgtaaaa
      721 tttggtatcg tgcgccatct gttttctctg ctggcgcagc aggtgccagt tgttcaggct
      781 gacggatgga ttgtaaacca gaacgaccag aaaaaacaaa acccgccgaa gcgggttaag
      841 tgcgggtgcg ttgaggatgc ctgacacatc agcggtggcg agggatttct cccccgccgg
      901 gtctcttact cctcaggttc gtaagctgtg aagacagcga cctccgtctg gccggttcgg
      961 attcgtacct cgcagaggtc tttcctcgtt accagtgccg tcactatgac ggttaaacag
     1021 atgacgataa gggcgattaa catcgccttt tgctgcttca tagcctgctt ctccttgcct
     1081 ttcggcacgt aagaggctaa cctacatgtg ttcagcatgg attgagcctc agattaatgt
     1141 taagcgtctt gcaggacgcg taatgttaac tggggctttt ctctatctgc cttttggtgt
     1201 tcatgcctga gacagatagc ctcaagcacc cgcagtcatt ctacttaact aagatttccc
     1261 tgcaaaccgt ttttgtccgg cacagtaaat atccaactaa accaatagcg ttcgctgtat
     1321 ttaccgccag tattcaatgc acatgaccgc catgaacacc cctaaaaaaa gggcatttat
     1381 atgtccaaac attaatatca aaacatcaat tttttccata taccttgctg tgaagatgat
     1441 gggcatacat gatgcgaaca accagaacgc aacaaacaaa aactgcaatg cgtttttcat
     1501 tattccccct acaatcaatg tgcaataaca tttaaacaca cctcaatttg gccggacata
     1561 taaatatcta aaccagaaaa aatcacttac atagcgttac aaactcttta gtctaaatac
     1621 tcatcgtaaa acattcccca tacttatcag tccgttccgc gccaggtagc ttattgcctt
     1681 atctggcaac ctataatcag gtttccgctt tttcagttgg ctggtcgttt aaccgacata
     1741 gttaacccat taatctggtt gccggatgct ggtggatttt cgcgttttag ttgttcataa
     1801 aagtgcacag ctttaaccag ttcttttgat gtaaccggga ctggtggggc agtgaataag
     1861 gcctgaattt catagttcgg cctgtcgtta caatcctctt ttttcggtac atatttccag
     1921 tcaccaaccc acaactcccc ctgagagtcc ataacacctt ttttcacgta gcgatatcgc
     1981 cacgctatcg gctctgcttc cagcgatgcc gtgcaatttt gaataactcg ccctctactc
     2041 gcgccatccc tgaattgggg tggcatttcg taatcgctat ttttaatttg gcttcttcga
     2101 tta
//
LOCUS       DADMHC010000321         2100 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.324, whole genome shotgun sequence.
ACCESSION   DADMHC010000321 DADMHC010000000
VERSION     DADMHC010000321.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2100)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2100)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.324"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            1..800
                     /locus_tag="JNZ57_004059"
                     /pseudo
     CDS             1..800
                     /locus_tag="JNZ57_004059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001608690.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            1239..2076
                     /locus_tag="JNZ57_004060"
                     /pseudo
     CDS             1239..2076
                     /locus_tag="JNZ57_004060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000244358.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
BASE COUNT          518 a          506 c          639 g          437 t
ORIGIN      
        1 ttctgggcct tgcccgtagc agttattttt atcaccgggc tgcactgaaa gccggtgata
       61 aatacgccac gatacgtaag atgctgacag atatctttaa cagtaattac cagagttatg
      121 gctatcgtcg cctgcatgcg atgctcaggc atgagggggg gcggctatca gaaaaggttg
      181 tacgcagact tatggtggag gaacagcttg tcgtcagtcg taaccgtcgt cgttgctaca
      241 gctcatattg cggagaaatc ggaccggctc cggataacct tatcgccaga gattttaagg
      301 cggagcaacc taatcagaaa tagctgacag atatcacgga gttccagctc cctgcaggta
      361 aagtctggct gtcaccagtg gtggactgct tcgatggaaa agttgtgagc tggtctctca
      421 gtacacgccc tgatgctgaa ctggtcaaca ctatgctgga tagcgctgtc gaaacgttaa
      481 atgctggcga acgaccggtg atacacagtg acagaggtgg gcattatcgc tggccaggct
      541 ggctggaaag agtgaatgca gcaggtctta ttcgctcaat gtcccgtaaa ggatgttcac
      601 ctgataatgc tgcatgcgaa ggctttttcg gcagactgaa aacggaaatg tattatgggc
      661 gtaaatggtc gggcatcacg ccagaaaagt tcatgcagca agtggatgct tacatcagat
      721 ggtataacga gcggcgtata aaattatcgc tgggtgccgt cagccccaaa atgtaccgcc
      781 aacaatgcgg gctggaatga taaagcagtc caggaaatcg tccgcatccc cccttcacca
      841 tttggattgt ccgctccacc caacatgttg tttccttaag gttcctacac cacaaaggaa
      901 actctcatgc tgcgcagtgg atggctgacg ttgccgacag gcgggaactt cgccagttca
      961 ggcagacacc ggaacagcgc ttcacgcagg aacaggagca tctgcagccg ctgctgggta
     1021 cggacttcga tatccgtcat gtctcctggg atggctatat cgaggttggc gggaaccgtt
     1081 acagtgtgcc ggaaagcctg tgtggtcagc tggtatcaat acggatctcg ctggatgatg
     1141 aactgcggat ctacagtaat gagcaacagg tagcatcgca ccgtctctgt tcggctgcat
     1201 acggctggca gaccgtgccg gagcgtcacg ctccactctg gcagcaggct tcggagcgca
     1261 tggccgaacg gctgggggag atacagaaac gggtaatcac tgtctgtgac cgggaagcgg
     1321 atatctggca ttacctgtat tataaagtca gccacggaca gcgtggtgcg tgctgcacag
     1381 aatcgccggc tggaagaggc acccggcaag ctcttcgaac tgccggaagt cctggcaacc
     1441 gcaggaagcc acacgctgaa tgtgatgcaa aaaggcgggc gggcagcccg tcaggcccgg
     1501 atgttcatca gttacagcga agtcagcata aaaaatcccg acaacagcgg ccaggcgctc
     1561 ccgctcacgt atgtctgttg ccgggagcag gcagaggacg gtgcctgctg gcatctgctg
     1621 acgtcaggaa aagcggcgag tgccgccgat gcacgacgta ttgtcagcca ttacgagcga
     1681 cgctggctga cagaggaata ccacaaggcg tggaaaagtg gtggtacatg gaatcgctgc
     1741 gaatgcagac ccgggataac cttgagcgca tggtggttat ccaggcgttt atagcggtac
     1801 gggtgctggg cctgcggcag ggaggtgtca gtgaagaaac acaaaatgac agctgtgaga
     1861 aaatactgac gccgacagag tggaaactac agtgggttaa gctggaagga aagccgcttc
     1921 cggtgcaggc accgaccctg aaatgggcct ggggcgatgg catgacagca aacgcacagg
     1981 tcgtcccggt tggggcgtca tgtgggatgg ctggtcagac ttcaggatat ggttgagggt
     2041 tacctggtga tgaagtctct tgatcaggag ctctgatcaa gagacagcag ctttgggggg
//
LOCUS       DADMHC010000322         2099 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.325, whole genome shotgun sequence.
ACCESSION   DADMHC010000322 DADMHC010000000
VERSION     DADMHC010000322.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2099)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.325"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            173..763
                     /locus_tag="JNZ57_004061"
     CDS             173..763
                     /locus_tag="JNZ57_004061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000380343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2313 domain-containing protein"
                     /protein_id="HAY8830050.1"
                     /translation="MDSLQDDYTKLLYGLMPPGPAWSDTDGVLDGLAPSLVRVHQRAD
                     ELVIEIDPGQSTELIERYEELYGLPDSCSPVGTQTLRQRQQRLEAKANVAGGINEQFF
                     LDQLEALGYTGVTIEQFQHLDASPDPEWGDRWRYFWRVTLPVDAGAQWQTCTDACNTP
                     IRTWGDTVAECVINKLCPSHTVVLFSYPDEDEDAQD"
     gene            750..1403
                     /locus_tag="JNZ57_004062"
     CDS             750..1403
                     /locus_tag="JNZ57_004062"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8830051.1"
                     /translation="MHRIDTLTAVKDKFGPGKNGFTDGNLRTGRLATWLNSAMWNAIQ
                     EEICGVIEKAGIELNKEEHDQLYKAILLLVGGAINEEALLIKNNLSDVEDRDEAVENL
                     GLKPTVDKAKNAVQRDGDTMTGELKIRGVNALRIFNEAFGLIFRRSEECLHLIPTSEG
                     QGENGDIGPLRPFTINLRTGEISMSHKVSVGGGSQVNGALGIGVQNALGGEFNCFRG"
     gene            1438..1959
                     /locus_tag="JNZ57_004063"
     CDS             1438..1959
                     /locus_tag="JNZ57_004063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830052.1"
                     /translation="MDVYANGQHVFRFQNGVAIALKNIQAGNAKKFTLSSANNSTKNA
                     AFYLWGNPSRPVVAELGDDSGWHFYSQRNTDGSITFAVNGQVIPLNYGNFDARYKHRT
                     EGVQDVRYGYEMYYNPGSNTVSWTFRSPSGHGLSGIAISDTGRNSADNVNGVYYRPLQ
                     KLINGTWYNVASI"
BASE COUNT          555 a          447 c          587 g          510 t
ORIGIN      
        1 tgccagaggg gcgtatgtat ctgtccagaa tcagtgaggc catcagtttg tctgctggtg
       61 aagtggccca ccggttaatc gtcccttcat cggatattga cctaggggag accgagcttc
      121 cggtgctcgg cgagatcacc tagcaggctt atgacccggc aaggagtaaa taatggattc
      181 gttacaggat gattatacaa agctgctgta cggactgatg ccgccggggc ctgcatggtc
      241 agataccgac ggtgtacttg acggtctggc accatcgctt gtgcgtgttc accagcgggc
      301 tgatgaactg gtgattgaaa tcgatcccgg tcagtccaca gagctgattg aacgttatga
      361 agaattgtat ggtttacctg attcctgttc ccctgtcgga acccagacat tacgccagcg
      421 tcagcaacgt cttgaagcaa aagccaatgt ggctggtggc ataaatgagc agttcttcct
      481 ggatcagctt gaggcgctgg gatataccgg cgtaacgatc gaacagttcc agcacctgga
      541 tgcaagcccc gatccggaat ggggagatcg ctggcgttat ttctggcgtg tgacgttgcc
      601 ggtggatgcc ggtgctcagt ggcagacatg cacggacgcc tgcaacacac cgatccggac
      661 gtggggggat acggttgcgg agtgcgtgat taataaatta tgtccgtcac acaccgtcgt
      721 tttattttcc tatccagatg aggatgaaga tgcacaggat tgatacgctg actgcggtaa
      781 aagataagtt tggtccgggt aagaacggat ttactgacgg aaatcttcgc acaggacgtc
      841 ttgctacctg gctgaacagt gccatgtgga atgccattca ggaggaaatc tgtggtgtca
      901 ttgagaaggc cgggatagaa ctgaataaag aagaacacga ccagctatat aaggctatat
      961 tattgctggt gggcggtgca attaacgaag aggcattgct gataaaaaat aacctttcgg
     1021 atgtggaaga cagggatgag gctgttgaaa acctcggatt aaaacccacg gtggataagg
     1081 caaaaaatgc cgttcagcgt gatggcgaca ccatgaccgg agagctgaaa atccgtggtg
     1141 ttaatgcgct gaggattttc aacgaagctt ttggcctgat ttttcgtcgt tcggaagagt
     1201 gcctgcacct tattcccacc agtgaaggtc agggggaaaa tggcgatatt ggtcccctgc
     1261 gcccgttcac cattaatctg cggacgggtg aaatatccat gtcgcataaa gtgtctgttg
     1321 gcggtggttc gcaggtcaat ggtgcgctgg gtatcggcgt tcagaacgcc ctgggggggg
     1381 aattcaattg ctttcgggga taacgataca ggtataaaac aaaacggcga cggcattctg
     1441 gatgtttatg cgaatggaca gcatgtattt cgtttccaga atggtgtggc gatagcgtta
     1501 aaaaatattc aggccggaaa tgctaaaaaa ttcacgttat ccagcgccaa caactccacg
     1561 aaaaatgcag cgttttattt gtggggtaat ccatccaggc ctgttgttgc agagcttggt
     1621 gatgattccg gctggcattt ctacagccag agaaataccg atggtagtat cacattcgct
     1681 gtaaacggac aggtaattcc gttaaattac ggaaacttcg atgcccgcta taaacatcga
     1741 actgaggggg tacaggatgt gcggtatggt tatgaaatgt attacaaccc tggcagcaac
     1801 accgtttcat ggacgtttcg ctcaccttcg ggacacgggt tgtcagggat agcgatatcg
     1861 gataccggcc gtaactcagc ggataacgtc aacggtgtgt attaccgacc gctgcaaaaa
     1921 ctgattaatg gcacctggta taacgtagcg agtatttaac aatgttgcat ttaaaaaata
     1981 ttacggtagg taatccgaaa accgcggaac aatatcagct gacaaaacag tatgatgtca
     2041 cctggctttt ttcggaagac ggcaaaaact ggtatgaaga acagaagaac tttgccagt
//
LOCUS       DADMHC010000323         2059 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.326, whole genome shotgun sequence.
ACCESSION   DADMHC010000323 DADMHC010000000
VERSION     DADMHC010000323.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.326"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            158..415
                     /locus_tag="JNZ57_004064"
     CDS             158..415
                     /locus_tag="JNZ57_004064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001599512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family phage regulatory protein"
                     /protein_id="HAY8830053.1"
                     /translation="MAIYSLVDENDLRTMKDIDRFIREKECIALTTLANSTRWKMEQA
                     GKFPRRIKIGERAAGYRLSEVQAWIRGEWHPGWKPGKTKQQ"
     gene            472..1050
                     /locus_tag="JNZ57_004065"
     CDS             472..1050
                     /locus_tag="JNZ57_004065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001038675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antirepressor protein"
                     /protein_id="HAY8830054.1"
                     /translation="MNKNIAVTGKGYARPVKKFCDIRDLVVLRFDSVNVRVVYLNGDP
                     WFVAKDVCAALELTNSRTALQMLDDDEKGVNLTYTPGGNQNMRIISESGFYKLIARSR
                     KATTPGTFAHRFSNWVFRNVIPGIRKTGTYGIPWGALQDFSRRKEQYQISASEKGREL
                     QACKRKKREQEEEEKTLIREYQPEFYFGNRIQ"
     gene            1082..>2059
                     /locus_tag="JNZ57_004066"
     CDS             1082..>2059
                     /locus_tag="JNZ57_004066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001323528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host cell division inhibitor Icd-like protein"
                     /protein_id="HAY8830055.1"
                     /translation="MGTRENKSITNNATFAAGGQCDQSDLVRSKVCNESFFLCSLRNF
                     SRANEQGANLSDSCSCAIFLRRLLRVGDGVLVDSVSLMVLSCKAMRLRSSNYGADIGY
                     SCSLTLRRWSSSRATVTSCPISSAALMPICSTLARASSDDTRGFSPLPSAWRRAISPR
                     MAVTINPALLSPSSLTDSIPCITSSGTLTVVSCDFAFLLAVAISETPNHRCVSVYTKK
                     EIQKALTCVSCAHNMKHTERIVEIQRATPRSAGNTYGASNQQRKLGAVMVAVNHIPHL
                     VHTQTAFVWRFLALSAGESQIIHVTAWTEREARSRCPSGCVAVFAAKIRQ"
BASE COUNT          564 a          436 c          522 g          537 t
ORIGIN      
        1 cttttaggtc ataaagtgaa aggggttgct ggtgtttaca ataaaagcag gcatataaag
       61 aaaaaacttg aggtgcttaa tatgtgggtt aattacctta atacgatagc aggatttaac
      121 aacaacgtta tcgagcttaa taaagaggtg gtgtgatatg gcaatttatt ctcttgttga
      181 tgaaaacgat ttgcgcacaa tgaaggacat tgatcggttc attcgtgaaa aagagtgcat
      241 agcacttacc acgctggcaa actcaacacg ctggaaaatg gagcaggcag gtaaattccc
      301 gcgacgtatc aagatcggtg aacgtgctgc agggtatcga ctttcagagg ttcaggcatg
      361 gatccgtggt gagtggcatc ctggatggaa acctggaaaa acaaaacagc aataaccagt
      421 aaataatgcc cctcatcacg aggggttttt tgtctataag gtaaaaacgc gatgaataaa
      481 aatattgccg tgacgggcaa ggggtacgct cgtccagtga aaaaattctg cgatattcgt
      541 gatctcgtcg ttctgcgctt tgatagtgtg aacgttcgtg tggtgtatct gaacggcgat
      601 ccgtggtttg ttgcaaaaga tgtttgtgct gcgctggaac taaccaattc gcgtacggcg
      661 ttgcagatgc ttgatgatga tgaaaaggga gtaaatttaa cttacacccc aggaggaaat
      721 cagaatatga gaattatctc tgagtcaggt ttctacaaac taatagcccg cagccgcaaa
      781 gcaacgacgc ctggcacatt tgctcatcgt ttcagtaact gggtattcag aaatgtgata
      841 ccaggtatca gaaaaacggg gacttatggt atcccgtggg gtgcattaca ggatttttcc
      901 cgccgtaaag agcaatatca aataagtgcc agcgagaagg ggagggagct acaggcatgt
      961 aagcgcaaaa agcgtgagca ggaggaagaa gaaaaaacgc tgatacgtga atatcagcct
     1021 gagttttact ttggtaaccg cattcagtga caaaacaaag gcgaccgcaa aagggtcgcc
     1081 agtgggaaca agggaaaaca aaagcatcac caacaatgcc acatttgcgg ctggtgggca
     1141 atgtgatcag tcagatttgg ttcgttccaa ggtttgcaac gagagctttt tcctgtgctc
     1201 tttaaggaat ttctcaagag caaacgaaca aggtgcgaat ctttctgatt catgttcatg
     1261 cgctatattt ttgcgtcgtc tcttacgagt tggtgatggt gttttggttg attctgtgtc
     1321 gctcatggtg ctgtcctgta aagcaatgcg cctgcgttcc tcaaactatg gcgctgatat
     1381 tggctattca tgctctttga ccttgcgtcg ctggagttct tcacgcgcga cggtgacgag
     1441 ttgcccgatc tcctcggctg ctttgatgcc gatttgttcg accttagcca gggcatccag
     1501 tgacgacaca aggggatttt ctccgctgcc ttctgcttgg cggcgggcca tttctccgcg
     1561 catggcggtt acgataaatc cggcattgct ttcaccgtcc agcttaacgg attccatccc
     1621 ttgcataaca tctagtggga ctctgacagt tgtcagttgt gattttgcgt ttttgttagc
     1681 cgttgccatt tctgaaactc ctaatcatcg gtgtgtttca gtatacacaa aaaaagaaat
     1741 acaaaaagcc ttgacgtgtg tttcatgcgc tcataacatg aaacacaccg aaaggattgt
     1801 tgaaatacaa agagcaacgc cccgcagtgc tgggaacaca tacggggcgt ctaaccaaca
     1861 acgtaaacta ggagccgtta tggttgctgt aaatcatata ccacaccttg tacacacaca
     1921 aacggccttt gtgtggcgtt ttctggcact gagtgccgga gaatctcaaa tcatccacgt
     1981 aaccgcctgg acggaacgcg aagcgcgtag ccgttgcccg tccggttgtg ttgctgtatt
     2041 cgctgcaaaa atccgccag
//
LOCUS       DADMHC010000324         2058 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.327, whole genome shotgun sequence.
ACCESSION   DADMHC010000324 DADMHC010000000
VERSION     DADMHC010000324.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2058
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.327"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..379
                     /locus_tag="JNZ57_004067"
     CDS             <1..379
                     /locus_tag="JNZ57_004067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8830056.1"
                     /translation="ICSNKHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDEKF
                     MNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSHRDFLNLKEIKLEHPLPSIKLYI
                     SYNKSSLNNLVFSRFIDRLNESF"
     gene            526..1746
                     /locus_tag="JNZ57_004068"
     CDS             526..1746
                     /locus_tag="JNZ57_004068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase"
                     /protein_id="HAY8830057.1"
                     /translation="MSIYKIPLPLNILEAARERITWTLNTLPRVCVSFSGGKDSGLML
                     YLTAELARQMGKKICVLFIDWEAQFSCSINYVQSLRELYTDVIEEFYWVALPLTTQNS
                     LSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFCFYQPGMTFEQFVREFAEWFSQKRPA
                     AMMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTW
                     YANHQSLCNPLYNLMYQAGVPLRHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVS
                     GVKSGDIYAGHDNHFYGHRKILKPEHLDWQEYALLLLNSMPEKTAEHYRNKIAIYLHW
                     YQKKGIEVPQTQQGDIGAKDIPSWRRICKVLLNNDYWCRALSFSPTKAKNYQRYNERI
                     KGKRQEWGILCNND"
     gene            1719..>2058
                     /locus_tag="JNZ57_004069"
     CDS             1719..>2058
                     /locus_tag="JNZ57_004069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HAY8830058.1"
                     /translation="MGDTMQQRLTQDLTQFLASLPEDDRIKAINEIRMAIHQVSPFRE
                     EPVDCVLWVKNSQLMPNDYNPNNVAPPEKKLLQKSIEIDGFTQPIVVTHTDKNAMEIV
                     DGFHRHEIGKG"
BASE COUNT          610 a          470 c          423 g          555 t
ORIGIN      
        1 aatttgtagt aataagcatc cgcgaattac tgacaatagc acttatgaac aaattatggc
       61 agaagagttc acccaattaa tatccaaatc agcaggagtt gatgatattc aaatggaaat
      121 agacgagaag tttatgaatc gcaaaatttc atttcgtggt tcctctttgc tgacaataat
      181 taatagcatt gcagttacag atttactggg aatagtcccc tatgaacttt ataactccca
      241 ccgtgacttt cttaatttaa aagagataaa actagaacat ccgttacctt caataaagct
      301 ttacatttcc tataataaat cttctttaaa taatttggtg ttctcccgat ttattgaccg
      361 tctaaatgag agtttttgat atataactac agacagctac tataactttc atctatttat
      421 tcacagcgcg aatgaaaaat aaaacactct gctttacagt gtttacttta taattaacag
      481 tcttatctca ctgttcaccc tgtaacgttc agagagcgtc ttcagatgtc tatttataaa
      541 attcctcttc cgctcaatat tctggaagct gcacgagagc gtattacctg gacactcaac
      601 accctacccc gcgtttgtgt ctcattttct ggcggcaaag actctggttt aatgctgtat
      661 ctgacagccg aacttgcccg acaaatgggc aaaaaaatct gcgttttgtt tatcgactgg
      721 gaggcgcaat tctcttgctc tattaactat gttcagtccc tgcgcgagtt gtacaccgat
      781 gtcatcgaag agttttactg ggttgcgctc ccgcttacga cgcaaaattc cctttcacaa
      841 taccaacccg aatggcagtg ctgggaacct gatgtcgaat gggtgcgtca gcccccgcaa
      901 gatgcgataa ccgatcctga ctttttctgc ttttaccagc caggcatgac cttcgaacaa
      961 tttgtacgtg agtttgccga atggttttca caaaaacgtc cggcggcaat gatgatcggc
     1021 atccgtgcgg atgagtccta caaccgtttt gtcgccatcg ccagtttaaa taaacaacgt
     1081 tttgccgacg ataaaccatg gactacggcc gcaccaggcg gtcatagctg gtacatttac
     1141 cccatttacg actggaaagt ggctgatatc tggacctggt atgcaaatca tcaaagtctc
     1201 tgcaaccccc tgtataacct aatgtatcag gcaggcgttc ctctgcgtca tatgcgaatt
     1261 tgcgaacctt ttggcccgga gcaacgacaa ggattatggc tctatcacgt tatcgaaccg
     1321 gatcgctggg ctgctatgtg cgcacgagtc agcggggtaa aaagtggcga catttacgcc
     1381 ggacatgaca atcatttcta tgggcatcgg aaaatcctca agccagaaca tttagactgg
     1441 caagaatatg cattattgct gctcaatagc atgccggaaa aaacagctga gcattaccgc
     1501 aataaaatcg ccatttattt gcactggtat cagaaaaaag gcatcgaggt tccacaaacc
     1561 cagcaagggg acattggcgc gaaagatatc ccctcctggc ggcggatatg caaagtttta
     1621 ctcaataacg attactggtg tcgggcatta tcatttagtc ctacgaaagc gaagaactat
     1681 cagcgttata acgaacggat aaaaggaaaa cgtcaggaat gggggatact atgcaacaac
     1741 gattaacgca ggatttaacg caatttctcg ccagcttgcc ggaagatgat cgcatcaaag
     1801 cgattaatga aatccgcatg gcgatccatc aggttagccc ctttcgtgaa gagccagtgg
     1861 attgcgttct gtgggttaaa aacagccaac ttatgcctaa tgattacaac ccaaacaacg
     1921 tggcaccacc cgaaaaaaaa ctgctgcaaa aatccattga aatagatggt tttacccaac
     1981 ccattgtggt cacacatacg gataaaaatg ccatggaaat cgtggatggt tttcaccgcc
     2041 atgaaattgg taaaggct
//
LOCUS       DADMHC010000325         2051 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.328, whole genome shotgun sequence.
ACCESSION   DADMHC010000325 DADMHC010000000
VERSION     DADMHC010000325.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2051)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2051)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2051
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.328"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(272..1726)
                     /locus_tag="JNZ57_004070"
     CDS             complement(272..1726)
                     /locus_tag="JNZ57_004070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector OspC family protein"
                     /protein_id="HAY8830059.1"
                     /translation="MKIPEAVNHINVQNNIDLVDGKTNPNKATKALQKNILRVTNSSS
                     SGISEKHLDHCANTVKNFLRKSIAAQSYSKMFSQGTSFKSLNLSIEAPSGARSSFRSL
                     EHLDKVSRHYISEIIQKVHPLSSDERHLLSIIINSNFNFRHQSNSNLSNNILNIKSFD
                     KIQSENIQTHKNTYSEDIKEISNHDFVFFGVEISNHQEKLPLNKTHHTVDFGANAYII
                     DHDSPYGYMTLTDHFDNAIPPVFYHEHQSFFLDNFKEVVDEVSRYVHGNQGKTDVPIF
                     NTKDMRLGIGLHLIDFIRKSKDQGFREFCYNKNIDPVSLDRIINFVFQLEYHIPRMLS
                     TDNFKKIKLRDISLEDAIKASNYEEINNKVTDKKMAHQALAYSLGNKKADIALYLLSK
                     FNFTKQDVAEMEKMNNNRYCNLYDVEYLLSKDGANYKVLEYFINNGLVDVNKKFQKAN
                     SGDTMLDNAMKSKNPKMIDFLLKNGAILGKRFEI"
BASE COUNT          615 a          364 c          344 g          728 t
ORIGIN      
        1 cccgtaaaga caggagtcaa gttcccgctc cgacataact gcgtgcaatg gattttgaag
       61 gaaccgtcag cccattcccc ggaggcaaac atgggctggc aaaagtgtag cggtattagg
      121 cacagctatt taggaaagag ggaccatctc catctcatta aatggaccac gccagacaat
      181 tcactgtcat gctgatgctg cactgtgggg acagaatcac tcatgatgac ttcgataatc
      241 gacgacatta ttatttggcc gagcttttag gtcatatctc aaatcgtttg cctaatattg
      301 ctccattttt taataaaaaa tcaatcattt ttggattttt gcttttcatt gcattgtcaa
      361 gcatagtgtc cccactattt gctttttgaa attttttgtt tacatcaacc aatccattat
      421 tgataaaata ttctagcact ttatagttgg caccatcttt actaagtaag tattcaacat
      481 catacagatt acaatatcta ttgttgttca ttttctccat ctctgcgaca tcttgttttg
      541 taaaattaaa tttagatagt aaataaagtg ctatatcagc ttttttattg cctaaagaat
      601 aagcaagggc ctgatgagcc atttttttat cagtcacttt attgttaatc tcttcataat
      661 tagatgcttt aatcgcatcc tccaaagata tgtctctgag ttttattttt ttgaagttat
      721 ctgtacttag cattcttggt atatgatact caagctgaaa cacaaagttt ataattctat
      781 ccagactaac aggatcaata tttttgttat aacaaaactc tctgaatcct tgatctttac
      841 tctttcttat aaaatcaata agatgcaacc caattccaag cctcatatct ttagtgttaa
      901 atattggaac atcagttttc ccctgattac catgcacata cctgctaact tcatccacaa
      961 cctctttaaa gttatctaag aaaaatgatt ggtgctcatg gtaaaaaaca ggtggaatag
     1021 cattatcaaa gtgatcggtt aatgtcatat atccatatgg agagtcatga tcaatgatat
     1081 acgcattggc gccaaaatct acagtatgat gtgttttatt tagtgggagt ttttcttgat
     1141 gattggaaat ttcaacccca aaaaaaacaa aatcgtggtt agagatttct ttaatatcct
     1201 cagagtatgt attcttatgt gtttgtatat tttcagactg aattttatca aaggatttaa
     1261 tattaagaat attatttgac agattagagt tactttgatg tctgaagtta aaattagaat
     1321 taataataat agaaagtaag tgacgttcgt ctgaagaaag aggatgaact ttttgtatta
     1381 tctcagagat atagtgcctg gacaccttat cgagatgctc aagtgaccga aatgatgacc
     1441 gtgctccaga tggcgcttca atagaaagat ttagtgattt gaaactggtc ccttgagaaa
     1501 acattttgct ataactttgc gctgctatag acttccttaa aaagtttttc acagtattag
     1561 cacagtgatc taaatgtttt tcacttatgc cagaagaaga tgagtttgtt acgcgtaata
     1621 tatttttttg taatgctttt gttgctttat tcggattcgt ttttccatca acaagatcaa
     1681 tattattctg aacattaata tgatttactg cttcaggtat tttcatcccc cccccaatta
     1741 tgtgcgtttt tatctgtggt tatttagata acattatcta actggacact ttcttgtatg
     1801 tattatagct aaatgaacag attttaatat gttgtatggt tttcactctg aaatcccctg
     1861 aatttaatca cgtttccttt acggaaggca attttaaccg tagtatcaat tattaaccct
     1921 tgggcttgat atccctctcc tcttctgggc acgggggatg tcagattact tattacagaa
     1981 accaaaagaa ttgtaagcgt catctcagtg tcgtctattt caatgtctga tgattggcga
     2041 tgatagagtc c
//
LOCUS       DADMHC010000326         1989 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.329, whole genome shotgun sequence.
ACCESSION   DADMHC010000326 DADMHC010000000
VERSION     DADMHC010000326.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1989)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1989)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1989
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.329"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..469)
                     /locus_tag="JNZ57_004071"
     CDS             complement(<1..469)
                     /locus_tag="JNZ57_004071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001459486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY8830060.1"
                     /translation="MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRN
                     FMHVPLGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPRE
                     YRHRDYWDLANIFPSFLIRQQQKTECRLVNFPETPIFGNSFKYDIEVSNKSPDE"
     gene            718..1587
                     /locus_tag="JNZ57_004072"
     CDS             718..1587
                     /locus_tag="JNZ57_004072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308365.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HAY8830061.1"
                     /translation="MEFSVLSNNLKMPMMGFGVFQVTDKNVCKQSVLNAIRTGYRLID
                     TAAVYGNEDAVGEAVREAISEGLCTRDELFITSKLWVQDMLNQDTAAAGIEASLKKSG
                     LEYFDLYLLHQAMRDYFSAWRALEDAYEEGKLKAIGVSNFYPHVLANFCETVRVKPMV
                     NQVELHPYFAQPEALATMKYYNVQPEAWAPLGGGRHKPFENNLLQSIADAHQKSISQV
                     ILRWNIQRGVVVIPKSTHQQRIEENFAIWDFSLTEKEMAQISSLDLGYVGESVKHFNP
                     EFVRGCLAVKIHD"
     gene            complement(1747..1983)
                     /locus_tag="JNZ57_004073"
     CDS             complement(1747..1983)
                     /locus_tag="JNZ57_004073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000896126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF417 family protein"
                     /protein_id="HAY8830062.1"
                     /translation="MAFTTPLVTLSFLITTPEAWVPALGDAHYGFPYLSGAGRLVLKD
                     TLMLAGAVMIMADSAREILKQRSNESSSTLKTEY"
BASE COUNT          574 a          392 c          464 g          559 t
ORIGIN      
        1 cttcatccgg tgatttattc gacacttcaa tgtcatattt aaatgagttg ccaaaaatag
       61 gtgtctcagg aaaattgact aatctacact ccgtcttttg ctgttgacgt attaaaaaag
      121 aagggaagat atttgcgaga tcccaataat cacggtggcg gtattcacgg ggagagcagc
      181 cgaataactt tttaaattcg cggctgaatg actgctgtga atcaaaatgc aaagagagtg
      241 caatatcaag catagatttc gcggtgagcc ggacaagaat ggcggcacgg caaagccttc
      301 gtttgcgaat gtattctccc aaaggcacat gcatgaaatt tcggaacaga agctggatgt
      361 tgcgtctgct gtagccagat ttctgtgcga tatcttcgat tgaaataggg tgctcaagat
      421 tgcactcaat ccactccagg agctgctgta gaatcttctg cctaatcatc acattctccg
      481 ttaattcttt gtcatatcgc acattttcgt tatgccctgg gccctaagtg tatcaaaaac
      541 agcaagggcg aaggcaaaag cactggtagc gcctgcttcg ttgtccccga aaatagagag
      601 gtttcagtcc tgcattatta atgaattttt tgcataagtg atatcaaaat ccacgtacta
      661 atttgaggtt acgttttaac gtagactcat tgttcatgcc taatggaggg actgacagtg
      721 gaattttccg tattaagtaa caatctgaaa atgccgatga tgggatttgg tgtttttcag
      781 gttaccgata aaaacgtgtg caaacagtca gtgttgaacg ctatccgcac aggttatcga
      841 ctcatcgaca ctgcagcggt atacggtaat gaagatgccg tcggtgaagc cgttcgtgaa
      901 gctatatctg aaggtttatg tacccgagat gagttattta taacgtctaa attgtgggtg
      961 caggatatgt tgaatcagga tacggcagca gcaggtattg aagcatcatt aaaaaaatcg
     1021 ggactagagt acttcgacct ctatttattg caccaggcta tgcgcgatta tttcagtgcg
     1081 tggcgtgcac tcgaagatgc ctatgaagag ggcaaattaa aagcaattgg ggtttccaat
     1141 ttctatcctc atgttctggc gaacttttgt gaaacggtaa gagttaaacc gatggtcaac
     1201 caggtcgagt tgcatcccta ttttgcccaa ccagaggcgc tggcaaccat gaagtattat
     1261 aacgtgcagc ctgaagcatg ggctccgtta ggtggtggac gacataaacc ctttgaaaat
     1321 aatctgcttc agagtattgc agatgcccat caaaaatcga tttctcaagt cattctgcgt
     1381 tggaatattc aacggggagt ggtcgttatt ccgaaatcga cacatcaaca gcgtatcgaa
     1441 gaaaattttg ctatctggga tttctcactg acagagaaag aaatggcaca aattagttcg
     1501 cttgatttgg gttatgttgg ggagtcggta aaacatttta atcctgaatt tgttcgtggt
     1561 tgtcttgctg taaaaataca tgattgatat taatcatata ttttacctga gacgacaaga
     1621 atcttttaac aggggagtga tattgatctt cactctgtca tatctccggt aatatggcgt
     1681 caggcttcat catcagaaag ggggcctgac gcctgaaaaa gtgaacaaca gacagtgttc
     1741 ggattatcaa tattcagttt ttaacgttga actggattca ttactgcgtt gtttaagaat
     1801 ttcccgcgcc gaatctgcca ttatcatgac agcaccagcc agcatcagag tatctttcaa
     1861 taccaagcga ccagcaccgg ataaataagg gaaaccataa tgagcgtcac ccaatgcggg
     1921 tacccatgcc tccggggtgg tgattaaaaa tgagagtgtt accagcggcg tggtaaatgc
     1981 catcagtga
//
LOCUS       DADMHC010000327         1921 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.330, whole genome shotgun sequence.
ACCESSION   DADMHC010000327 DADMHC010000000
VERSION     DADMHC010000327.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1921)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1921)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1921
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.330"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            198..719
                     /locus_tag="JNZ57_004074"
                     /pseudo
     CDS             198..719
                     /locus_tag="JNZ57_004074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015873107.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid replication initiator-like protein"
BASE COUNT          541 a          455 c          485 g          440 t
ORIGIN      
        1 aaaaaaaaaa cttaactata tgatttatat agaatagagc attttcaata gtgctcatgg
       61 ggtgagccta atagtgctca tgagctatga gcactattga gttggtgtga atcatttttg
      121 attcaacatg catcatgcta aaatgacgca acttgaatca tgcttgagca ctattaggct
      181 catggggtga gcactttatg acagacgacg agaagaagat tcaaacgctg gaacagcagc
      241 tttcacaagc aagatcatta cttagtcata cgatggatac actccaagag gaacggtact
      301 tagcatcgct cagaaaaaac cgcgtaacag gtggttatta catgatgagc agagcagcag
      361 aaaaaaactt aagagccttg caaaccgcaa atccagcggc agcactggta tttagtgtga
      421 tccgtgaaaa catgcagatt ggaaccaatg ccgtagccat cagtaacaca gcgttctgca
      481 agattattgg taaatcacgg gctactgtga ctagagcgat caaacacttg gctgatcata
      541 actacgttca gattgtgaag gtcggcacga caaacactta cgtggtcaat gagcaagtag
      601 cgtttgcagg cagccgtggt cagcggaaag cagtattttc ggcaactgtt gttgctcatg
      661 aatgtgagca agacgaaggt tgggagcagg ttaagaagct aaaagccata cctgtcatct
      721 gtgaggatga aagacctgtc attggttgtg atgatcttcc acctccagac cagcaagacc
      781 tagagttgaa ctaatccaaa ttgagctagc ggcaggcgga caatcagggg ctgcgtgtta
      841 acgttctgac catgattgtc tatcctgcat tgctcttttg ccgcctcaaa tcccttgcgt
      901 gtttttgctc cccgatctcc agaacgaccg agccgccacg gttccggcag cgccttgagc
      961 gcaaccggaa accgtctggg gagaacccca gaccccatcg ctgtaacacc gacggtctac
     1021 gatcacctac caaccgagtg gctgcctgta ccgtgcaaat gggctttgca gggggctggc
     1081 gcggttccag gcgacctgaa agcccctggt taggggtatc ggcgcgcctg acctcctgaa
     1141 acgctctgta atcgtttttc gcgccttcca tgccctgacg ggcatttaaa acccgtttcg
     1201 tgtgtctgag agctactgag cgcgtttgaa gggctatctg acgactcatc cccgaaagaa
     1261 caacaacggg atcaccgaca acatgcgaga gattataccg ctcgccgcag ccccagcgac
     1321 cgaacgtagt gagcgagtgg gcgaggaagc ggaagagaac cggaagttac attgagcact
     1381 tacgcactga tgcggggtgt cggggtgaag ccctgaccag gtggggaatg tctgagtgtg
     1441 cgtgcgcggt ccgacattcc cacatcctgt cccgaaatca ggattgtttt tcaggcacaa
     1501 ctacggcaaa ttcagcgttg ttacgggttt gtccagcccg tagctagccg ataaaaataa
     1561 tattggttac tccacaataa ttcctcttca tacccctgac gtttcagggt tttttttgcc
     1621 ttaaaaatcc ccgcgccgaa agcactgtag taaacgttac ataaaaaagt tcgaaatgga
     1681 ggaatcgtca taaagagatt ccagagcgaa tcgatcatct ggctatttga gaaagcgaaa
     1741 cagtgagcaa aaacgcggtc tgtaaggctt gcagaggagt aagccagtat acactccgct
     1801 atcgctacgt gactgtgtca gggctgcgcc ccgacacccc aaaaaaaatt tggctaggtg
     1861 attgccaagc gaagcggagc caatcaccta actcttttaa tagaaataga agcaaaatag
     1921 g
//
LOCUS       DADMHC010000328         1919 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.331, whole genome shotgun sequence.
ACCESSION   DADMHC010000328 DADMHC010000000
VERSION     DADMHC010000328.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1919)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1919)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.331"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..>1919
                     /locus_tag="JNZ57_004075"
     CDS             <1..>1919
                     /locus_tag="JNZ57_004075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000514710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HAY8830063.1"
                     /translation="PPEGFESSGAETGLGVEVTKAKPVTRTITSANIDRLRVTFGVQS
                     LVQTTSKGDRNPSSVRILIQLQRNGRWVTEKDVTINGKTTSQFLASVILDNLPPRPFN
                     IRMVRETADSTTDQLQNRTLWSSYTEIIDVKQCYPNTAIVGMQVDAEQFGGQQMTVNY
                     HIRGRIIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCLWDMLTHPRYGMGKRLGAA
                     DVDKWALYAIGQYCDQTVPDGFGGTEPRMTFNAYLAQQRKAWDVLSDFCSAMRCMPVW
                     NGQMLTFVQDRLSDVVWPYTNSDVVVDDNGVGFRYSFSALKDRHTAVEVNYTDPQNGW
                     QTSTELVEDPEAILRYGRNLLKMDAFGCTSRGQAHRAGLWVIKTELLETQTVDFTLGS
                     QGLRHTPGDIIEICDNDYAGTLTGGRVLSIDAATRTLTLDREVTLPETGTSAVNLING
                     SGKPVSVDITAHPAPDRIQVSTLPDGVETYGVWGLSLPSLRRRLFRCVSVRENTDGTF
                     AITAVQHVPEKEAIVDNGARFEPQSGSLNSVIPPAVQHLTVEVSAADGQYLAQAKWDT
                     PRVVKGVRFSLRLTSGSGEDSRLVTTAITADTEHRFSGLPLGEYTLTVRAINSYGQQG
                     EPATTTFRINAPAKPA"
BASE COUNT          414 a          549 c          611 g          345 t
ORIGIN      
        1 ccaccggaag gctttgagtc ctccggagct gaaaccggac tgggcgtgga agtgacgaag
       61 gcaaaaccgg tgacgcgcac cattacgtcc gcgaacattg accgcctgcg ggttaccttc
      121 ggggtgcagt cactggtgca gaccacgtca aagggcgacc gtaatccttc ctctgtccgg
      181 attctgattc agttacagcg taatggccgc tgggtgacgg aaaaggacgt caccattaac
      241 ggcaagacca cctcacagtt cctggcctcg gtgattctgg ataatctgcc tccccgcccc
      301 tttaacatcc ggatggtcag ggagacggcg gacagcacca cggaccagct gcagaacaga
      361 acgctgtggt cgtcatacac cgaaatcatc gatgtgaaac agtgctaccc gaacacggcc
      421 attgtgggga tgcaggtgga tgcggagcag tttggtggtc agcagatgac ggtgaactac
      481 catatccgcg gtcgcatcat ccaggtgccg tcaaactatg acccggaaaa acgcacgtac
      541 agtggtatct gggacggcag tctgaaaccg gcatacagca acaacccggc ctggtgcctg
      601 tgggacatgc tgactcaccc gcgctacggc atgggaaaac gtctgggggc ggcggatgtg
      661 gacaagtggg cgctgtatgc catcgggcag tactgcgacc agacggtccc ggatggtttc
      721 ggggggaccg agccgcggat gacctttaat gcgtacctgg cacaacagcg taaggcgtgg
      781 gacgttctca gtgatttctg ctctgcgatg cgctgtatgc cggtatggaa cggccagatg
      841 ctgacgtttg ttcaggaccg cctgtcggat gtggtgtggc cgtacaccaa cagcgatgtg
      901 gtggtggatg ataacggcgt ggggttccgc tacagcttca gtgccctgaa ggaccggcac
      961 acggcggtgg aggtgaatta caccgacccg cagaacggct ggcagacctc cacggaactg
     1021 gtggaagacc cggaagccat actgcgctac gggcgcaatc tgctgaagat ggacgcgttc
     1081 ggctgtacca gccgcggtca ggcccaccgt gccggactgt gggtgataaa gaccgaactg
     1141 ctggaaacgc agacggtgga cttcacgctc gggtctcagg ggctgcggca cacacccggt
     1201 gacattattg aaatctgtga taatgactat gccgggaccc tgaccggcgg acgtgtcctg
     1261 tccattgatg ctgccacccg caccctgacg ctggaccgtg aggttaccct gccggagaca
     1321 ggtacatcgg cggtgaacct gattaacggc agcggtaagc cggtgagtgt ggacatcacc
     1381 gcacaccccg cgccggaccg gatacaggtc agtaccctgc ctgatggtgt ggagacatac
     1441 ggggtgtggg gactctccct gccgtcactg cgccgtcgcc tgttccgctg tgtctccgtc
     1501 cgggaaaaca cggacggcac ctttgccatc acggcggtgc agcacgtgcc ggaaaaagaa
     1561 gccatcgtgg ataacggtgc ccgctttgag ccgcagtcag gctccctgaa cagcgtcatc
     1621 ccaccggcag tgcagcacct gacggtggag gtgagcgcag ctgacggcca gtatctggca
     1681 caggcgaaat gggacacgcc gcgggtggtg aagggggtgc gcttcagtct gcgactgacc
     1741 agcggaagcg gagaagacag ccgtctggtg accaccgcta tcactgcgga tacagagcat
     1801 cgtttcagtg gtctgccgct cggggaatac accctgacag tcagggcaat taacagttat
     1861 ggccagcagg gcgaaccggc caccaccacc ttccggatta acgcgccagc aaaacccgc
//
LOCUS       DADMHC010000329         1889 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.332, whole genome shotgun sequence.
ACCESSION   DADMHC010000329 DADMHC010000000
VERSION     DADMHC010000329.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1889)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1889)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1889
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.332"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            42..1238
                     /gene="hemY"
                     /locus_tag="JNZ57_004076"
     CDS             42..1238
                     /gene="hemY"
                     /locus_tag="JNZ57_004076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX biogenesis protein HemY"
                     /protein_id="HAY8830064.1"
                     /translation="MLKVLLLFVLLIAGIVVGPMIAGHQGYVLIQTDNYNIETSVTGL
                     AIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRKRRRARKQTEQALLKLAEGDYQQ
                     VEKLMAKNADHAEQPVVNYLLAAEAAQQRGDEARANQHLERAAELAGNDTIPVEITRV
                     RLQLARNENHAARHGVDKLLEVTPRHPEVLRLAEQAYIRTGAWSSLLDIIPSMAKAHV
                     GDEEHRAMLEQQAWIGLMDQARADNGSEGLRNWWKNQSRKTRHQVALQVAMAEHLIEC
                     DDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPEQLEKVLRQQIKNVGDRPLLWSTL
                     GQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADALDRLHKPEEAAAMRRDGLMLTL
                     QNNPPQ"
BASE COUNT          520 a          452 c          477 g          440 t
ORIGIN      
        1 caaggtgata ctccggcagc cgcgccgcaa ggagaataac catgctaaaa gtgttattac
       61 tctttgtttt gctgattgcg gggatagtgg ttggcccgat gattgccggt catcagggtt
      121 atgtgctgat ccagaccgac aactacaata tcgaaaccag cgtcacgggc ctggcgatca
      181 tattgattct ggcgatggta gtgctgtttg ccattgagtg gctactgcgg cggatcttcc
      241 gcactggcgc gcacacccgt gggtggtttg tcgggcgtaa gcgtcgccgt gcacgtaagc
      301 agaccgaaca ggcgctgctg aaactggcgg aaggcgatta tcagcaagtt gaaaagctga
      361 tggcgaaaaa tgccgatcac gctgaacaac cggtggtgaa ctatctactg gctgccgaag
      421 ccgcgcaaca acgtggtgat gaagcgcgcg ccaaccaaca tctggaacgc gcagcggagc
      481 tggccggcaa tgacaccatt ccggtagaaa tcacccgtgt acgtctgcaa ctggcccgta
      541 atgaaaacca tgctgcacgc cacggcgtgg ataagctgct ggaagttacg ccacgccatc
      601 cggaagtatt acgtctggcg gaacaggcgt atatccgcac aggtgcatgg agttctctgc
      661 tggatatcat cccatcaatg gcgaaagccc atgttggtga tgaagaacat cgtgcaatgc
      721 tggaacaaca ggcatggatt ggcctgatgg atcaggcgcg tgccgataac ggtagtgaag
      781 gtttgcgtaa ctggtggaaa aaccaaagcc ggaaaacgcg tcatcaagta gcgttgcagg
      841 tggcaatggc ggaacatctt attgaatgtg acgatcatga tactgcccag caaattatca
      901 tcgatggcct gaaacgccag tacgacgatc gcctactgct gccgattcct cgactgaaaa
      961 ccaacaatcc ggaacagctg gaaaaagtgc tgcgccagca gatcaaaaac gtcggcgatc
     1021 gcccgctgtt gtggagcaca ctgggccagt cactgatgaa gcacggagaa tggcaggaag
     1081 catcgctcgc cttccgcgca gcgctgaaac aacgtccgga cgcctacgat tacgcatggc
     1141 ttgccgacgc gctggacaga ctgcacaagc cggaagaagc tgcagcgatg cgtcgcgacg
     1201 gtttgatgtt aacgttgcag aacaacccac cacagtagtt ccttctcacc cggaggcaag
     1261 cacctccggg acctttctga tgcataaaaa aacgcctgct cttattacgg agcaggcgtt
     1321 aaaacaggtc tgtatgacaa caagtgggtg cttcactcaa cgttgtgtcc atggtgtctg
     1381 atgaggcata agcgacatct gtcagtggac gataagcacc gtaaacggct ctgcgtcatt
     1441 ccggagttta tgaggcacta aggcgaacat aagagatgga atgagcatct actcgtttat
     1501 tatgccacag agaatcggga aataacatcc cttaacactt gttatgagat aattctgtaa
     1561 tcctctttgc ttcctgagta ataacttcct gagtgaatat ttaacctgag cttgatccta
     1621 cacatactta ttatgaatga taaaattcat tcaattaata acacatatat taattgccgt
     1681 taaaactaaa aaagcatcaa taatcaacgc gatataataa acctgcctta catatcaact
     1741 gcgccagagg taggattgaa aacgctctcc tgattttcca attcattttc tggataaata
     1801 aataatttat ttttgtcact attatttatg taatcatcct gtcagggaga gggatctcaa
     1861 ttatcaatgc ttaattacgt catcatttt
//
LOCUS       DADMHC010000330         1882 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.333, whole genome shotgun sequence.
ACCESSION   DADMHC010000330 DADMHC010000000
VERSION     DADMHC010000330.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1882)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.333"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            314..1102
                     /gene="virF"
                     /locus_tag="JNZ57_004077"
     CDS             314..1102
                     /gene="virF"
                     /locus_tag="JNZ57_004077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858179.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family invasion system transcriptional
                     regulator VirF"
                     /protein_id="HAY8830065.1"
                     /translation="MMDMGHKNKIDIKVRLHNYIILYAKRCSMTVSSGNETLTIDEGQ
                     IAFIERNIQINVSIKKSDSINPFEIISLDRNLLLSIIRIMEPIYSFQHSYSEEKRGLN
                     KKIFLLSEEEVSIDLFKSIKEMPFGKRKIYSLACLLSAVSDEEALYTSISIASSLSFS
                     DQIRKIVEKNIEKRWRLSDISNNLNLSEIAVRKRLESEKLTFQQILLDIRMHHAAKLL
                     LNSQSYINDVSRLIGISSPSYFIRKFNEYYGITPKKFYLYHKKF"
     gene            complement(1044..1454)
                     /locus_tag="JNZ57_004078"
     CDS             complement(1044..1454)
                     /locus_tag="JNZ57_004078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001409096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HAY8830066.1"
                     /translation="MPFHRPTKWVQYISAAPALSQQAVDQEWSYMDFLEHLLHEEKLA
                     RHQRKQAMYTRMVAFPAVKTFEEYDFTFATRAPQKQLQSLRSLSFIERNENIVLLGPS
                     GVGKTHLAIAMGYEAFKIFYDISKISLELYHNIH"
     gene            1465..1882
                     /locus_tag="JNZ57_004079"
                     /pseudo
     CDS             1465..1882
                     /locus_tag="JNZ57_004079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611947.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          597 a          336 c          371 g          578 t
ORIGIN      
        1 ttccgtatag gatattatga tgctggagtt ttgcgaagct ccactccttt ccgaacattt
       61 acacagatat tgcctaagaa aagtgaaacc ataatatggt tatagtccct ttcagtgcaa
      121 atacttagct tgttgcacag agaaatagaa gctgcataag ctctttcttc aaaaaatgta
      181 aataaagtta aatataggaa aaattactta atctatctta ataacggaaa gattttgtat
      241 acaatcactg ttacagaaat ttcttagtta ctctgtaaac actaaatata gtttggtata
      301 ttctgttgaa tttatgatgg atatgggaca taaaaacaaa atagatataa aggttcgctt
      361 gcataactat attattttat atgcaaaaag gtgttcaatg acggttagct caggcaatga
      421 aactttgact atcgatgaag ggcaaattgc ttttatagag cgaaatatac aaataaacgt
      481 ctccataaaa aaatctgata gcattaatcc atttgagatt ataagccttg acagaaattt
      541 attattaagc attattagaa taatggaacc aatttattca tttcaacact cctattctga
      601 ggagaaaagg gggttaaaca aaaaaatatt cctcctctct gaggaggagg tttctatcga
      661 tttgttcaaa tctataaaag agatgccttt cggcaaaaga aagatctata gtttagcttg
      721 ccttttatca gctgtttctg atgaggaagc tttatatact tcgatatcga tagcttcttc
      781 tcttagtttt tctgatcaga taaggaagat tgttgaaaaa aacatcgaga agagatggcg
      841 tctttctgat atttcaaata acttgaattt atcagaaata gctgttagaa aacgactgga
      901 gagtgaaaaa ttaacatttc aacaaatcct tcttgatatt cgcatgcatc atgcagcaaa
      961 gcttttattg aatagtcaaa gctatattaa tgatgtatca agacttatcg gaatatcaag
     1021 cccatcttat tttataagga aatttaatga atattatggt ataactccaa agaaatttta
     1081 cttatatcat aaaaaatttt aaatgcttca tagcccatcg ctattgccag atgggttttc
     1141 cccacacctg atggccctag taatacgata ttttcattac gttctatgaa gctgagtgag
     1201 cgtaacgact ggagttgctt ctgcggtgct ctggtggcga atgtgaagtc atactcttcg
     1261 aacgttttca ccgccgggaa ggctaccatt cgggtataca tcgcctgttt acgttgatga
     1321 cgtgccagtt tttcttcatg aagcagatgc tccaggaagt ccatataact ccattcctgg
     1381 tctactgcct gttgtgacag cgcaggcgct gcgcttatgt actgcaccca ttttgttgga
     1441 cgatgaaatg gaatagcccc taatatgtca aagccaaaat acccttttga aaagcgcctt
     1501 gaagtcgtga atcactactt cactactgat gatggttaca ggatcatctc ggcacgtttt
     1561 ggtgtccccg aacccaggtc aggacatggg ttgccctcta tgaaaaacat ggagaaaaag
     1621 gcttaattcc caaacctaaa ggtgttagtg ctgatccaga gttgcgtatt aaggtcgtga
     1681 aagctgtgat tgagcagcac atgtccctta atcaggctgc tgctcacttt atgcttgctg
     1741 gtagtggttc tgtagccagg tggctgaagg tttatgaaga gcgcggagaa gctggtttac
     1801 gcgcgctcaa gattggcacc aaaagaaaca ttgcaatatc agttgatcca gaaaaagcgg
     1861 catcagcatt ggagctgtca aa
//
LOCUS       DADMHC010000331         1843 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.334, whole genome shotgun sequence.
ACCESSION   DADMHC010000331 DADMHC010000000
VERSION     DADMHC010000331.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.334"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..704
                     /locus_tag="JNZ57_004080"
     CDS             <1..704
                     /locus_tag="JNZ57_004080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HAY8830067.1"
                     /translation="NLDQLVSMTSIEIAELTGKEHRNVLRDIRNMAEELNALKTEQCS
                     KLSSHIGVTKDVYLNAQGKQQPLYRLDRKHTFILVAGYSVHLRAKCYDHIQTLERRVL
                     QLEDQKKRAAIQSANRRGVTWGDYCKTYDLPAQKLMTALLQHRGLFRKNPISNEWSVN
                     PKYSDCFRIIKPSDQKFSAGGYNFRFNAKGLEVFGKPAIVDKLRGILIAFTGTDQQKQ
                     EHLLKQAQSGKLEGL"
     gene            1018..1509
                     /locus_tag="JNZ57_004081"
     CDS             1018..1509
                     /locus_tag="JNZ57_004081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830068.1"
                     /translation="MLFNNNEWKLSVTDIDLYANTCKLDGQSYPLSLAIKTLIPGYLS
                     GLPSTSREAMELLEALAEAGVAIGNFFSNDLLTAYQRRQMNKRVEAERIAKELASQKE
                     RTREMFMTEDEWQKELQRREQVKAERRTYGENLRSATHSAGRSRASIMADLDSGANWM
                     DSL"
     gene            1593..>1843
                     /locus_tag="JNZ57_004082"
     CDS             1593..>1843
                     /locus_tag="JNZ57_004082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830069.1"
                     /translation="MTMTKDALQFGIEPVRITDTDNMQVNEGLPTNADPQVYAFQLAK
                     LVKTMLNSVLKDAQDNIPFPVEVLPTRNSLPTPIIAHTLA"
BASE COUNT          483 a          505 c          444 g          411 t
ORIGIN      
        1 caaacctcga ccagcttgtc tccatgacct caattgaaat tgctgagctg acaggcaagg
       61 agcaccgaaa tgtcctgcgt gatattcgca atatggctga ggagcttaac gcgctcaaaa
      121 ctgagcagtg ctcaaaactg agcagtcata tcggggtgac taaagatgtt tatctaaacg
      181 cgcaggggaa acagcagcct ctgtaccgtc tcgaccgtaa gcatactttt attctggtcg
      241 ctggctattc cgttcacctc cgcgccaagt gttacgacca tattcagacg ttagagcgtc
      301 gagtccttca actggaagac cagaagaagc gagcagccat tcagtctgct aaccgtcgag
      361 gcgtgacttg gggcgactac tgcaaaacct atgatctacc cgctcagaag ctaatgaccg
      421 cacttctcca gcatcgtggc ctctttcgta agaacccaat cagtaacgag tggtctgtaa
      481 atccgaagta ttccgactgc ttccgtatca ttaagccgtc tgaccagaag ttctcagcag
      541 gtggttataa ctttcgcttc aacgctaagg gattggaggt cttcggtaag cctgcgatag
      601 tcgataaact gcgaggcatc cttattgcct tcactggcac cgaccagcag aagcaagagc
      661 atctcctgaa gcaggcccaa tccggcaagc tggagggact ctaagatgat tgacccgcgc
      721 acacctgagg gccgcatgac tctccgttac cgtggctacc ggactgaagt cctcctcaga
      781 gagcttggtc tagacccgga agatgagacc cgccagcacc aatcacgaga cgagctgata
      841 gtgcaactgg tcgctatgaa actgccgtca gctagcaagc tagcgcctaa ccgttagcag
      901 ctcacctact taatacctca ttttaaacct tttgagatga ccgatgcggg gagacgccgc
      961 aggactaaac acgcctgtgg tcgaccgata gtctcaacct caaaggagta ccagcatatg
     1021 ttattcaaca acaacgaatg gaaactgtca gtcaccgaca tcgaccttta cgcaaatact
     1081 tgcaagctgg acggtcagtc ctatccgttg tcgctcgcta tcaagaccct cattccgggc
     1141 tatctgtcag gcctgccgtc taccagccgc gaggcaatgg agttactgga agctctggct
     1201 gaagctggtg tagctattgg caacttcttc agtaatgacc tgctgaccgc ctaccaacgc
     1261 cgccagatga ataagcgtgt cgaggctgag cgtatcgcta aagagctggc gtctcagaaa
     1321 gagcgtaccc gcgaaatgtt catgaccgaa gacgaatggc agaaagagct acagcgccgc
     1381 gaacaggtca aagctgaacg ccggacatat ggtgagaacc tccgcagtgc tacccattcc
     1441 gctggtcgct cacgtgcatc aattatggct gacctcgata gtggcgctaa ctggatggac
     1501 agcttgtaag caagcgaccc tcatctgaga acacacggtc cctgactgcc tgttagggac
     1561 ttcaagtatt tgactcaagg agattaatta ttatgaccat gacaaaagac gctttacagt
     1621 ttggcattga gccagttcgc attactgata ctgacaacat gcaggtaaac gaaggtctcc
     1681 cgactaacgc cgaccctcag gtctatgcct tccagttagc taagctggtg aagaccatgc
     1741 tcaattctgt acttaaagac gctcaggata acattccgtt ccctgtagaa gtcctgccga
     1801 cccgtaacag cttaccgact ccaatcattg ctcacactct ggc
//
LOCUS       DADMHC010000332         1791 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.335, whole genome shotgun sequence.
ACCESSION   DADMHC010000332 DADMHC010000000
VERSION     DADMHC010000332.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.335"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..90
                     /gene="yoaK"
                     /locus_tag="JNZ57_004083"
     CDS             <1..90
                     /gene="yoaK"
                     /locus_tag="JNZ57_004083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoaK family small membrane protein"
                     /protein_id="HAY8830070.1"
                     /translation="GIIFPVVIFITAVVFLAWFFIGGYAAPGA"
     gene            93..167
                     /gene="yoaJ"
                     /locus_tag="JNZ57_004084"
     CDS             93..167
                     /gene="yoaJ"
                     /locus_tag="JNZ57_004084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YoaJ"
                     /protein_id="HAY8830071.1"
                     /translation="MKKTTIIMMGVAIIVVLGTELGWW"
     gene            complement(226..474)
                     /locus_tag="JNZ57_004085"
     CDS             complement(226..474)
                     /locus_tag="JNZ57_004085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HAY8830072.1"
                     /translation="MGILSWIIFGLIAGILAKWIMPGKDGGGFFMTILLGIVGAVVGG
                     WISTLFGFGKVDGFNFGSFVVAVIGAIVVLFIYRKIKS"
     gene            complement(622..804)
                     /locus_tag="JNZ57_004086"
     CDS             complement(622..804)
                     /locus_tag="JNZ57_004086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1869 domain-containing protein"
                     /protein_id="HAY8830073.1"
                     /translation="MGKATYTVTVTNNSNGVSVDYETETPMTLLVPEVAAEVIKDLVN
                     TVRSYDTENEHDVCGW"
     gene            complement(808..1168)
                     /gene="yeaR"
                     /locus_tag="JNZ57_004087"
                     /pseudo
     CDS             complement(808..1168)
                     /gene="yeaR"
                     /locus_tag="JNZ57_004087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310533.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1971 domain-containing protein"
     gene            complement(1341..>1791)
                     /gene="leuE"
                     /locus_tag="JNZ57_004088"
     CDS             complement(1341..>1791)
                     /gene="leuE"
                     /locus_tag="JNZ57_004088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="leucine efflux protein LeuE"
                     /protein_id="HAY8830074.1"
                     /translation="GVATLIKTTPILFNIVRYLGAFYLLYLESKILYATLKGKNNEAK
                     SDEPQYGAIFKRALILSLTNPKAILFYVSFFVQFIDVNAPHTGISFFILATTLELVSF
                     CYLSFLIISGAFVTQYIRTKKKLAKVGNSLIGLMFVGFAARLATLQS"
BASE COUNT          499 a          418 c          395 g          479 t
ORIGIN      
        1 ggtattattt ttccggttgt aatctttatt acagcggtcg tatttttagc atggtttttt
       61 attggcggct atgctgcccc gggggcataa agatgaaaaa aacaacgatt attatgatgg
      121 gtgtggcgat tattgtcgta ctcggcactg agctgggatg gtggtaacgt cacctctaaa
      181 aaatagtaaa ggctgcctgt gtgcagcctt tgtgcaattt aagcgttaac ttttaatctt
      241 cctgtagata aatagcacga caatcgcacc aataacggca accacgaagc tgccaaaatt
      301 gaagccatcg actttaccaa agccaaacag cgtgctgatc catccgccga ctacggcacc
      361 gactatcccc agcaggatag tcataaagaa tccaccacca tctttacctg gcatgatcca
      421 cttcgccaga ataccggcaa taagcccaaa aataatccat gacagaatgc ccattgtttc
      481 ctcacttatc tgttttgcat tagcgggtta gtcgctgata aaaagcatag cacaacatcg
      541 ggagggcaag atttgtgacg agcatcacgg aggatttttt tgcgatggcg cagaaattgc
      601 gccatcaacg atcagtgata attaccaacc acaaacatca tgttcgtttt ccgtgtcata
      661 agaacgcacg gtattcacca gatcttttat cacttcagcc gccacttctg gcaccagcaa
      721 agtcatcggc gtctctgttt cataatcgac agaaacgcca ttactgttat tggtgacggt
      781 cacggtatac gttgctttgc ccatgattca tttcccgtta tgaatgactt tccgttgttg
      841 cgcaccttcc atcaggactt caggagccac gaagaagtca atgttgaaat aagtatcgtc
      901 agtcatggct tcaatgttgt gccacttttc tggagggaac accgcaaact gccccgcttc
      961 gataaggatc acctgatcag gctctgcact gtgttcatca gcgtagccga gatatttgac
     1021 cgccccatgc ataacggaaa ggcgtgggta acccccctgg cgcgttcctt tatcaagatg
     1081 acgttcgaat tattccggca ggcgcagttt gtttattcca gaaaggcgtt gagcgcgtat
     1141 gaatataatt ctgtgggatt tgcagcatcc ttttccctcc ttcggtgaat gcgctgaaaa
     1201 cggtttattc cagccgtttc agggtacgcc tgataatttg cattttaaat accatttatt
     1261 ggttactttt tagcaccata tcagagaaaa atcagggagg attacaagtg ggaagcccgc
     1321 gacaacgcgg gctgaatgta tcaggattgc agcgtcgcca gtcgggcggc gaaacccacg
     1381 aacatcaaac caatcagtga gttgccaact ttagccagtt tctttttggt acgtatgtac
     1441 tgcgtgacaa aagcaccaga aataatcagg aagctcaaat agcagaaact caccagttcc
     1501 agcgtcgtcg ccagaataaa gaatgaaatt cccgtatgtg gggcattaac atcgataaac
     1561 tgtacgaaaa acgacacata gaacaaaatg gctttcggat tagtcaggct caaaattaac
     1621 gcgcgtttaa aaatggcccc gtattggggc tcatcggatt tggcctcgtt atttttaccc
     1681 ttcagggtcg cgtagagaat tttactctcc agatatagca aataaaacgc accaagataa
     1741 cgtacaatgt tgaataatat cggggtggtc ttaattaatg tcgccactcc a
//
LOCUS       DADMHC010000333         1785 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.336, whole genome shotgun sequence.
ACCESSION   DADMHC010000333 DADMHC010000000
VERSION     DADMHC010000333.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1785)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1785)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1785
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.336"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            263..370
                     /locus_tag="JNZ57_004089"
     CDS             263..370
                     /locus_tag="JNZ57_004089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin Ldr family
                     protein"
                     /protein_id="HAY8830075.1"
                     /translation="MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK"
     gene            complement(457..>1785)
                     /gene="bcsG"
                     /locus_tag="JNZ57_004090"
     CDS             complement(457..>1785)
                     /gene="bcsG"
                     /locus_tag="JNZ57_004090"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsG"
                     /protein_id="HAY8830076.1"
                     /translation="MIGAIFVLLVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFSL
                     WPAGQPTTTVTTTGGNAAATVATTGGAPVVGDMPAQTTPPTTANLNAWLNNFYNAEAK
                     RKSTFPSSLPADAQPFELLVINICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATSY
                     SGPAAIRLLRASCGQTSHTNLYQPANNDCYLFDNLSKLGFTQHLMMGHNGQFGGFLKE
                     VRENGGMQTELMDQTNLPVILLGFDGSPVYDDTAVLNRWLDVTEKDKNSRSATFYNTL
                     PLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGDR
                     MQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVIDQPSSFLAISDLVVRVLDGKI
                     FTEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRLNGGDWVPYPQ"
BASE COUNT          432 a          457 c          483 g          413 t
ORIGIN      
        1 aattaagctg gaaggcatcg cgcaatgagg aagattgccg ggtgctgaca gtaaaaagca
       61 atcgtaaaat cagcggcaag ccgaaagggt tccggtgagg cgcaatgttg cgggggcttt
      121 atccctggtg gcattggttg ctggagagag aaaacccccg cacgttgcag gtatgcacct
      181 gacaacatca cgggggctaa tcttgaaccc aaacaactca agaatagccg cgaaacgttg
      241 gcattacaac acaggcggct atatgacgct cgcagaactg ggcatggcct tctggcatga
      301 tttagcggct ccggtcattg ctggcattct tgccagtatg atcgtgaact ggctgaataa
      361 gcggaagtaa cgtgtcatgc gggcgtcagg ctgccgtaat ggcaatttgc gcccggatca
      421 ggccgcagag gttaaactct gcggcctttt tcgtgcttac tgcgggtaag gcacccagtc
      481 gccgccgttc aggcgaacgt acggtttatc ctggtattga ataactactg catttgagtt
      541 ctcggagacc ggtgctgttt gtggcaaccc actggtgagt tttttccagt caacattgtc
      601 ttcggtgaaa atcttgccat caagaacgcg aaccaccaga tcggagatag ccaggaagct
      661 gctcggttgg tcgatgacaa tcggtgcccc ctgatgtggt gccttcatgc cgaagaattt
      721 caccccaacg gggacgtctg tgatagacgg gctagggata tcacgtaggc cagatacctg
      781 cattctgtcg cccttcagcg cgccgccgtg ttccggcacc acgaccacca tcactttacg
      841 acccgatttc tccagttcag taaagaaggc gtccagttca tcaaagaatt tctgcgcccg
      901 cgctttgtaa tccgctgttt tgctgacccc cggataatgg ttgccgtcat gcagtggaag
      961 cgtgttgtag aacgtggcac tacggctgtt tttatctttt tcggtaacgt ccagccagcg
     1021 gttaagcacg gcggtatcgt cataaaccgg cgaaccatca aagcccagca aaataaccgg
     1081 cagatttgtt tgatccatca attcagtctg catgccgcca ttttcgcgaa cttctttcaa
     1141 aaaaccgccg aactggccgt tatgtcccat catcaggtgc tgggtaaagc ccagtttcga
     1201 aaggttatca aacagatagc agtcgttatt tgccggttga tacagattag tgtgcgaagt
     1261 ctgcccgcag ctggcgcgca gtaaacggat cgccgccggg ccactgtagg aggtggcgga
     1321 gttaaagttc ttgaactcaa tatcgaaatg cgaccacagt ggatgcgaca tcaacccggc
     1381 ggcttctata tccgaccagg aaagcgaaca gatgttaatc accagtagtt caaatggctg
     1441 agcatcagcg ggcagcgaag acgggaaggt cgatttacgt ttcgcctccg cgttatagaa
     1501 attattcagc caggcgttaa ggttcgccgt tgttggcggt gtagtttgtg cgggcatatc
     1561 acccactacc ggtgcgccac ccgtcgtcgc aacggttgcc gctgcgttac cacccgtcgt
     1621 tgttacagtg gtcgtcggtt gtccggctgg ccacaaggag aaacttggtc ccgccagggt
     1681 aagtacgttc agccatagca gtatggcaac cacaaaaacg gtaatgcgaa tccattgtga
     1741 caggaataac caggccacta ataaaacaaa aatggcccca atcat
//
LOCUS       DADMHC010000334         1770 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.337, whole genome shotgun sequence.
ACCESSION   DADMHC010000334 DADMHC010000000
VERSION     DADMHC010000334.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1770)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1770)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.337"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(271..1506)
                     /locus_tag="JNZ57_004091"
     CDS             complement(271..1506)
                     /locus_tag="JNZ57_004091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HAY8830077.1"
                     /translation="MLQQVPTRAFHVMAKPSGSDCNLNCDYCFYLEKQSLYREKPVTH
                     MDDDTLEAYVRHYIAASEPQNEVAFTWQGGEPTLLGLDFYRCAVKLQAKYGAGRKISN
                     SFQTNGVLLDDKWCAFLAENHFLVGLSLDGPAEIHNQYRVTKGGRPTHKLVMRALTLL
                     QKHHVDYNVLVCVNRTSAQQPLQVYDFLCDAGVEFIQFIPVVERLADETAASDGLKLH
                     APGDIQGELTEWSVHPDEFGEFLVAIFDHWIKRDVGKIFVMNIEWAFANFVGAPGAVC
                     HHQPTCGRSVIVEHNGDVYACDHYVYPQYRLGNMHQQTIAEMIDSPQQQVFGEDKFKQ
                     LPAQCRSCNVLKACWGGCPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLKAMADLL
                     AHGRPASDIMQAHLLVVNK"
     gene            complement(1653..1729)
                     /locus_tag="JNZ57_004092"
     tRNA            complement(1653..1729)
                     /locus_tag="JNZ57_004092"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1693..1695),aa:Pro,seq:tgg)
BASE COUNT          448 a          487 c          414 g          421 t
ORIGIN      
        1 atgacatgaa accggagcat tttgcatgga gttttcgttt tcacccaaac ttcttgttgt
       61 tgctgtcgcc gccgctcttc ctctcatggc cagcgcagca gataccccgt caactgccac
      121 cgcacgcaaa ggctttgccg gatacgatca cccaaaccag tatccacaga acgctgcaat
      181 ttattgaatt tgcacgatca tgtaggccgg ataaggcgtt tacgccgcat ccggcaatca
      241 accgcaggcg gccacaaaat ggccgctatt ttacttattc accaccagca aatgtgcctg
      301 cataatgtca ctggccgggc gaccgtgcgc cagcaaatca gccattgctt taagatatgg
      361 cggtagatgg cggaaataac gctgataccc ggcacacaaa taattcagcc ccggtttgcc
      421 gctggcatcg agcatgaagc ggtgtttcgg gcagcctccc cagcacgctt ttaacacgtt
      481 acaactgcga cactgcgccg gtaattgctt aaatttatct tcaccaaaca cctgctgttg
      541 cggggaatcg atcatttctg caattgtttg ctgatgcata ttccccagcc gatattgcgg
      601 ataaacatag tgatcgcagg cgtaaacgtc gccgttgtgc tcaacaatca ccgagcgccc
      661 acaggttggc tgatgatggc aaaccgcacc cggcgcaccg acaaaattgg caaacgccca
      721 ttcgatattc atcacgaaaa tcttgccgac gtcgcgtttg atccagtggt caaaaatcgc
      781 caccagaaat tcaccaaatt catcggggtg cacagaccat tccgtcagtt ccccctgaat
      841 atcaccaggc gcatgtagtt tcagtccatc gctggcagct gtttcatcag ccaggcgctc
      901 gaccaccgga ataaactgga tgaattcgac tcccgcatcg cacaaaaaat cataaacctg
      961 caacggttgc tgcgcgctgg tgcggttgac gcagaccagc acgttatagt cgacatgatg
     1021 tttttgcagc agcgtcaggg cacgcatcac cagcttatgc gttggtctgc cacctttggt
     1081 cacgcgatat tgattgtgga tctcagccgg accgtccagc gataacccaa caagaaaatg
     1141 attttctgcc agaaatgcac accatttatc atcgagcagc acgccgttag tctggaagct
     1201 gttacttatc ttcctgccag caccgtattt cgcctgtaac tttacggcac agcggtaaaa
     1261 atccagcccg agtaacgttg gttcgccgcc ctgccaggta aaagccactt cgttttgcgg
     1321 ttcgctggca gcgatatagt gacggacata cgcttccagc gtgtcatcgt ccatatgcgt
     1381 gactggcttt tcgcggtaaa gggattgttt ttcgagataa aaacagtagt cacagttcag
     1441 attacaatcg gaaccactcg gtttcgccat cacatgaaaa gcacgcgttg gaacctgttg
     1501 cagcatggtc actccttgcc tgaagtcatc cttcaatacg ttaagggcga aatcataccg
     1561 tggggcaatg agttattacg ggcgtttatt gcgaagggag ggtgacgaaa tgcacagaaa
     1621 acaaaaaacc ccgccgaagc ggggttcaaa attggtcggc gagagaggat tcgaacctcc
     1681 gacccactgg tcccaaacca gttgcgctac caagctgcgc tactcgccga aatactgctt
     1741 tttgaatttt tagttcaatt ctttaaagtc
//
LOCUS       DADMHC010000335         1755 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.338, whole genome shotgun sequence.
ACCESSION   DADMHC010000335 DADMHC010000000
VERSION     DADMHC010000335.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1755)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1755)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1755
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.338"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..273)
                     /locus_tag="JNZ57_004093"
     CDS             complement(<1..273)
                     /locus_tag="JNZ57_004093"
                     /inference="COORDINATES: protein motif:HMM:NF013927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830078.1"
                     /translation="MAGVAKQELTINWYYADVNGNIGYVHTGAYPDRQSGHDPRLPVP
                     GTGKWDWKGLLPFEMNPKVYNPLSGYIANWNNSPQKDYPASDLFAFL"
     gene            complement(261..1619)
                     /locus_tag="JNZ57_004094"
     CDS             complement(261..1619)
                     /locus_tag="JNZ57_004094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PbsX family transcriptional regulator"
                     /protein_id="HAY8830079.1"
                     /translation="MKNRNRMIVNCVTASLMYYWSLPALAEQSSSEIKIVRDEYGMPH
                     IYANDTWHLFYGYVVAQDRLFQMEMARRSTQGTVAEVLGKDFVKFDKDIRRNYWPDAI
                     RAQIDALSPEDMSILQGYADGMNAWIDKVNTNPETLLPKQFNTFGFTPKRWEPFDVAM
                     IFVGTMANRFSDSTSEIDNLALLTALKDKYGVSQGMAVFNQLKWLVNPSAPTTIAVQE
                     SSYPLKFNQQNSQTAALLPRYDLPAPMLDRPAKGADGALLALTAGKNRETIAAQFAQG
                     GANGLAGYPTTTNMWVIGKSKAQDAKAIMVNGPQFGWYAPAYTYGIGLHGAGYDVTGN
                     TPFAYPGLVFGHNGVISWGSTAGFGDDVDIFAERLSAEKPGYYLHNCKWVKMLSREET
                     ITVKNGQAETFTVWRTVHGNILQTDQTTQTAYAKSRAWDGKEVASLLAWTHQMKAKNW
                     QE"
BASE COUNT          461 a          428 c          375 g          491 t
ORIGIN      
        1 caaaaaggca aacagatccg aagcgggata atctttttgg ggagaattgt tccagttagc
       61 aatatatccc gacagggggt tatacacctt agggttcatt tcaaaaggca atagcccttt
      121 ccagtcccat tttcccgtac caggaacggg taatcgcgga tcatggcctg attgacgatc
      181 tggataagca ccagtatgaa cataaccaat attgccgttt acatcagcat agtaccagtt
      241 gatggtcagt tcttgtttcg ctactcctgc caatttttgg ccttcatctg atgagtccag
      301 gccagcaaag acgccacctc tttaccatcc catgcgcggg atttagcgta agccgtttgt
      361 gtcgtctggt cagtttggag aatgttgcca tgcaccgtac gccagacagt aaaggtctct
      421 gcctgaccat ttttcaccgt aatggtttcc tcacggctta acattttcac ccacttacaa
      481 ttatgtaagt agtagcctgg tttctctgcc gacagccgtt cagcaaaaat atcgacatca
      541 tcgccgaaac ctgccgttga tccccaggaa atcacaccat tatgaccaaa aaccagccca
      601 ggataggcaa atggtgtatt gccagtgaca tcataaccag caccgtgcag accaatacca
      661 taagtatacg caggcgcata ccagccaaac tgcggaccat ttaccatgat tgctttcgca
      721 tcctgggctt tgcttttgcc gatcacccac atattggtgg tcgttggata ccccgccaga
      781 ccattggcac caccctgtgc aaattgtgca gcaatagttt cccggttctt ccctgctgtt
      841 aacgccagca gtgcgccatc cgcccctttt gctggtcggt caagcattgg tgcaggtaaa
      901 tcgtagcgtg gcaacagagc tgctgtttgc gagttttgct gattaaattt aagtgggtag
      961 ctactctctt gtacggcaat agtggttggc gctgatgggt ttaccagcca tttcaactga
     1021 ttaaataccg ccatgccttg tgatacacca tatttatctt ttaaagccgt tagcagtgcc
     1081 agattatcaa tttcgctagt gctatcagag aagcggtttg ccatggtgcc cacaaatatc
     1141 atcgcgacat caaacggttc ccagcgctta ggagtaaagc caaatgtatt aaactgtttt
     1201 ggtaagagcg tctctggatt ggtatttacc ttatcaatcc aggcattcat tccatcagcg
     1261 tagccttgca gaatggacat atcctctggg gaaagggcat caatttgcgc ccggatagca
     1321 tccggccagt agttacgacg gatatcttta tcaaatttca caaaatcttt gccaagcact
     1381 tccgcgacag tcccttgagt actgcgacgt gccatttcca tctgaaaaag gcgatcttgt
     1441 gctactacat agccataaaa taggtgccat gtatcattgg cataaatatg cggcatgccg
     1501 tattcatcgc gaacaatctt tatctcactt gacgactgct cagccagtgc aggtaagctc
     1561 caataataca tcagggaagc agtaacacag ttcacgatca tacgatttct atttttcatt
     1621 gtatcctctg gcaggtgtat aattagcgaa ttgatactag caacgaagct tcggttatct
     1681 atttgcagag aattgtttca ttatgaactg tgagcgcgat aactaatttt tgatacaaaa
     1741 atttcattaa tgtga
//
LOCUS       DADMHC010000336         1702 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.339, whole genome shotgun sequence.
ACCESSION   DADMHC010000336 DADMHC010000000
VERSION     DADMHC010000336.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1702)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1702)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1702
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.339"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            103..564
                     /locus_tag="JNZ57_004095"
     CDS             103..564
                     /locus_tag="JNZ57_004095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HAY8830080.1"
                     /translation="MKACLLLFFYFSLIGQLHGADVKIKENESVMGSTAMTYDLSEEK
                     LMKLKYKSQHGDSEASFRLYQYYCFTKNNIDKQLRFLERSASQGNVTAQFNYGVFLSD
                     TNPTLSEYYNLNRAIYWMEFAVNNGNIDAKSKLQELKKLKRMDRRKNKENP"
     gene            1271..1597
                     /locus_tag="JNZ57_004096"
                     /pseudo
     CDS             1271..1597
                     /locus_tag="JNZ57_004096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518821.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          591 a          266 c          339 g          506 t
ORIGIN      
        1 agaccttggt aattggataa catatgggcc atctgggcac cccatttcta atatgcaagg
       61 tacgccagaa aaacccagtg atataagata ggttgtagat gtatgaaagc atgcttgtta
      121 ctattttttt atttttctct tattggtcaa ttgcatggtg ctgatgtgaa aataaaagaa
      181 aacgaaagtg tgatgggatc tacagcaatg acctatgatt taagtgaaga aaagctgatg
      241 aaactgaagt ataaatcaca acatggtgat tcagaggcat catttcgact atatcaatat
      301 tactgcttta ctaaaaataa tattgataaa caattgcgat tcttggaaag atcagcatct
      361 caggggaatg ttacagcgca gtttaattat ggggtctttt tatcagatac aaatccaaca
      421 ttatcagaat attataattt gaatagagct atttattgga tggaattcgc tgtaaataac
      481 ggtaatattg atgcaaagag caaacttcaa gagctcaaaa agctaaagcg aatggataga
      541 aggaagaata aggagaatcc gtaaaagcaa tagttcatca gactgccgca gcagtagtat
      601 gatgatgaat cagggctgta ctataactat tatcggtaac attaaccgca gcaggggcgg
      661 tataacactc aggctccgat tgggctggaa ggtaggtgga atttttatca gtatccgttg
      721 aacccgattt ctggaatcga tccccttggg attagccacc tgtttataca acataacttt
      781 aggtatgctt tcgtgtgttt cagatatacc atgtgatgat aatttttatg atgtgcttag
      841 tattccagtc gcttctggta ataatatgca atataaaaat aatccccgtt gtacacattt
      901 ataaatagat ggccaatacc tcaaggccta tggagttgga atgttaatga cccgggagca
      961 agcaatagaa aacctgacgg catacgatta gtaccgtcag ttaatacagg aacttataat
     1021 cgcaatggat tttcaataca tagttgttta aacacttttg gtccgtcttt aggacctcga
     1081 ttctgttccg agggttgtat aactggttta tctaatgaca tgcaaaaatt aaatgagtta
     1141 atattttcag agccagatag cacattaaca gttacggact aaaaaaatat ggcaaggtta
     1201 ttaacaattg tattttttct ctatttctgc gagtgcagtt actgcaagaa aatttcagag
     1261 agagttagat ttggcagaca aagcaatatt atgggcacta atatcagcca gtactaaaga
     1321 gggacgaaaa gcgtgttcac taagctattt tgcctgtaag gccgcagagg ctgaactcgg
     1381 actggcatat atggctgcga atgataacaa ggaatttctc acatccttat ctaatataat
     1441 gaggtacaaa atagatgctg gactttccga atcctataca tgctatttat taagtaaggg
     1501 aaagatcata agaccatatc tgaaaaatct aaatccactc caacttgccg ctgattgcat
     1561 tgaaacagta aataaaataa aagataagaa taaaaaaatc attgatataa attcagttaa
     1621 tatttgtagt gatgataaaa atataaaatt gagagttaat agtactatta tggccattga
     1681 tgattctata aaatgcatcg at
//
LOCUS       DADMHC010000337         1701 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.340, whole genome shotgun sequence.
ACCESSION   DADMHC010000337 DADMHC010000000
VERSION     DADMHC010000337.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1701)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.340"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..1163
                     /gene="bcsE"
                     /locus_tag="JNZ57_004097"
     CDS             <1..1163
                     /gene="bcsE"
                     /locus_tag="JNZ57_004097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsE"
                     /protein_id="HAY8830081.1"
                     /translation="SRLNHCSLLVINPGNNNDKQFSLLLEEYRSLFGLASLRFQGDQH
                     LLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDEKRILSNVAVLEGAP
                     PLSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKIL
                     VRENTASLRATDERLLLACGANMVIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLL
                     SMTQPLKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGVLVALRPVPGIRVEQALTLCRP
                     NRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDDQISAEL
                     VQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS"
     gene            1160..1351
                     /gene="bcsF"
                     /locus_tag="JNZ57_004098"
     CDS             1160..1351
                     /gene="bcsF"
                     /locus_tag="JNZ57_004098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417994.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsF"
                     /protein_id="HAY8830082.1"
                     /translation="MMTISDIIEIIVVCALIFFPLGYLARHSLRRIRDTLRLFFAKPR
                     YVKPAGTLRRTEKARATKK"
     gene            1348..>1701
                     /gene="bcsG"
                     /locus_tag="JNZ57_004099"
     CDS             1348..>1701
                     /gene="bcsG"
                     /locus_tag="JNZ57_004099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsG"
                     /protein_id="HAY8830083.1"
                     /translation="MTQFTQNTAMPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHP
                     LLNLVFAAFLLMPIPRYSLHRLRHWIALPIGFALFWHDTWLPGPESIMSQGSQVAGFS
                     TDYLIDLVTRFINWQM"
BASE COUNT          383 a          443 c          426 g          449 t
ORIGIN      
        1 ggagcaggtt aaaccattgt tcgcttttgg taattaatcc cggaaataat aacgataaac
       61 aattttcatt gttgcttgag gaataccgtt cactttttgg tcttgccagt ttgcgttttc
      121 agggtgacca acatttgctg gatattgcct tctggtgcaa cgaaaaaggg gtcagcgccc
      181 gtcagcagct tagcgttcag caacaaaatg gtatctggac attagttcaa agcgaagagg
      241 cggagatcca accacgcagc gacgaaaaac gcattctgag taatgttgct gtactggaag
      301 gtgcgccgcc gctatcggaa cactggcaac tgttcaacaa taacgaagtc ctgttcaatg
      361 aagcccgtac cgctcaggcg gcgacggtgg tcttttcttt acagcaaaat gcgcaaatcg
      421 agccactggc ccgcagcatt cataccctgc gtcgccagcg cggtagtgcg atgaaaatcc
      481 tcgtgcggga aaataccgct agcctgcgcg ccaccgatga acgtttgtta ttggcctgcg
      541 gtgcaaatat ggttattccg tggaatgcgc cactctcccg ttgtctgacg atgatcgaaa
      601 gcgtgcaagg gcagaagttt agtcgctatg tgccggaaga tatcactacc ttgctgtcaa
      661 tgacccagcc gctcaaactg cgtggtttcc agaagtggga tgtgttctgt aatgccgtca
      721 acaacatgat gaataaccct ctattacctg cccacggtaa aggcgttctg gttgccctac
      781 gtccggtacc gggtatccgc gttgaacaag ccctgacgct gtgtcgccct aaccgtaccg
      841 gcgatatcat gaccattggc ggtaatcggc tggtgctgtt tctctcattc tgtcggatta
      901 acgatctgga taccgcgttg aatcatattt tcccattgcc tactggcgac attttctcaa
      961 accgtatggt ctggtttgaa gatgatcaaa tcagtgccga gctggtgcag atgcgcctgc
     1021 ttgccccaga acaatggggc atgccgctgc ctttaacgca aagttctaaa ccggtcatca
     1081 atgccgagca cgatggtcgc cactggcgac gaataccaga acccatgcga ctgttagatg
     1141 atgctgtgga gcgctcatca tgatgaccat cagcgatatc attgaaatta ttgtcgtttg
     1201 cgcactgata tttttcccgc tgggctatct ggcgcggcac tctttgcgac gcattcgcga
     1261 caccttacgt ttgttctttg ctaaacctcg ttatgttaaa ccggccggga cattacgccg
     1321 cacggaaaaa gccagggcaa ccaaaaaatg actcaattta cgcaaaatac cgccatgcct
     1381 tcttccctct ggcaatactg gcgcggcctt tccggctgga acttctattt tctggttaag
     1441 ttcggcctgt tgtgggcggg atatcttaac ttccatccgc tcctcaattt ggtgtttgcc
     1501 gcgtttctgc tgatgcccat tccgcgctac agcctgcatc gcttgcgcca ctggattgcc
     1561 ctgccgatcg gctttgcttt gttctggcat gacacctggt tgcctggccc ggaaagcata
     1621 atgagccagg gttcgcaggt ggcggggttc agtaccgatt atttaatcga ccttgtcaca
     1681 cgctttatta actggcagat g
//
LOCUS       DADMHC010000338         1698 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.341, whole genome shotgun sequence.
ACCESSION   DADMHC010000338 DADMHC010000000
VERSION     DADMHC010000338.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1698)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1698)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.341"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..>1698
                     /locus_tag="JNZ57_004100"
     rRNA            <1..>1698
                     /locus_tag="JNZ57_004100"
                     /product="23S ribosomal RNA"
BASE COUNT          449 a          371 c          527 g          351 t
ORIGIN      
        1 acttggcgtt aagttgcagg gtatagaccc gaaacccggt gatctagcca ttggcaggtt
       61 gaaggttggg taacactaac tggaggaccg aaccgactaa tgttgaaaaa ttagcggatg
      121 acttgtggct gggggtgaaa ggccaatcaa accgggagat agctggttct ccccgaaagc
      181 tatttaggta gcgcctcgtg aattcatctc cgggggtaga gcactgtttc ggcaaggggg
      241 tcatcccgac ttaccaaccc gatgcaaact gcgaataccg gagaatgtta tcacgggaga
      301 cacacggcgg gtgctaacgt ccgtcgtgaa gagggaaaca acccagaccg ccagctaagg
      361 tcccaaagtc atggttaagt gggaaacgat gtgggaaggc ccagacagcc aggatgttgg
      421 cttagaagca gccatcattt aaagaaagcg taatagctca ctggtcgagt cggcctgcgc
      481 ggaagatgta acggggctaa accatgcacc gaagctgcgg cagcgacact atgtgttgtt
      541 gggtagggga gcgttctgta agcctgtgaa ggtgtactgt gaggtatgct ggaggtatca
      601 gaagtgcgaa tgctgacata agtaacgata aagcgggtga aaagcccgct cgccggaaga
      661 ccaagggttc ctgtccaacg ttaatcgggg cagggtgagt cgacccctaa ggcgaggccg
      721 aaaggcgtag tcgatgggaa acaggttaat attcctgtac ttggtgttac tgcgaagggg
      781 ggacggagaa ggctatgttg gccgggcgac ggttgtcccg gtttaagcgt gtaggctggt
      841 tttccaggca aatccggaaa actaaggctg aggcgtgatg acgaggcact acggtgctga
      901 agcaacaaat gccctgcttc caggaaaagc ctctaagcat caggtaacat caaatcgtac
      961 cccaaaccga cacaggtggt caggtagaga ataccaaggc gcttgagaga actcgggtga
     1021 aggaactagg caaaatggtg ccgtaacttc gggagaaggc acgctgatat gtaggtgaag
     1081 tccctcgcgg atggagctga aatcagtcga agataccagc tggctgcaac tgtttattaa
     1141 aaacacagca ctgtgcaaac acgaaagtgg acgtatacgg tgtgacgcct gcccggtgcc
     1201 ggaaggttaa ttgatggggt cagcgcaagc gaagctcttg atcgaagccc cggtaaacgg
     1261 cggccgtaac tataacggtc ctaaggtagc gaaattcctt gtcgggtaag ttccgacctg
     1321 cacgaatggc gtaatgatgg ccaggctgtc tccacccgag actcagtgaa attgaactcg
     1381 ctgtgaagat gcagtgtacc cgcggcaaga cggaaagacc ccgtgaacct ttactatagc
     1441 ttgacactga acattgagcc ttgatgtgta ggataggtgg gaggctttga agtgtggacg
     1501 ccagtctgca tggagccgac cttgaaatac caccctttaa tgtttgatgt tctaacgttg
     1561 acccgtaatc cgggttgcgg acagtgtctg gtgggtagtt tgactggggc ggtctcctcc
     1621 taaagagtaa cggaggagca cgaaggttgg ctaatcctgg tcggacatca ggaggttagt
     1681 gcaatggcat aagccagc
//
LOCUS       DADMHC010000339         1667 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.342, whole genome shotgun sequence.
ACCESSION   DADMHC010000339 DADMHC010000000
VERSION     DADMHC010000339.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1667)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1667)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.342"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..1343)
                     /locus_tag="JNZ57_004101"
     CDS             complement(<1..1343)
                     /locus_tag="JNZ57_004101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000099160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66-like element ISEc22 family transposase"
                     /protein_id="HAY8830084.1"
                     /translation="MSSSLPDDINALKRLLAEQEALNRALLEKLNEREREIDHLQAQL
                     DKLRRMNFGSRSEKVSRRIAQMEADLKALQKESDTLTGRVDDPAVQRPLRQTRTRKPF
                     PESLPRDEKRLLPAASCCPECGGSLSYLGEDAAEQLELMRSVFRVIRTVREKHACTQC
                     DAIVQAPAPSRPIERGIAGPGLLARVLISKYAEHTPLYRQSEMYGRQGVELSRSLLSG
                     WVDACCRLLSPLEEALQDYVLTDGKLHADDTPVPVLLPGNKKTKTGRLWTYVRDDRNA
                     GSTLAPAVWFAYSPDRKGIHPQTHLAGFSGVLQADAYAGFNELYRDGRITEAACWAHA
                     RRKIHDVHVRTPSALTEEALKRIGELYAIEAEIRGMTAEQRLAERQLKTKPLLKSLES
                     WLREKMKTLSRHSELAKAFAYALNQWPALTYYADDGWAEADNNIAENALRMVSLGR"
     gene            complement(1392..>1667)
                     /gene="tnpB"
                     /locus_tag="JNZ57_004102"
     CDS             complement(1392..>1667)
                     /gene="tnpB"
                     /locus_tag="JNZ57_004102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019104956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HAY8830085.1"
                     /translation="GLAAKVQTTLKDDPMSGHVFIFRGRNGSQVKLLWSTGDGLCLLT
                     KRLERGRFAWPSARDGKVFLTPAQLAMLLEGIDWRQPKRLLTSLTML"
BASE COUNT          312 a          513 c          477 g          365 t
ORIGIN      
        1 cggcccagac tgaccatccg caacgcattt tcagcgatgt tattgtccgc ctcagcccag
       61 ccatcatctg catagtacgt cagcgccggc cactggttca gggcgtatgc gaacgctttc
      121 gccagttctg agtgtcgcga cagggttttc atcttttcac gcagccagct ttccagggat
      181 ttcagcagcg gtttcgtttt caactgacgt tcggcaaggc gctgctccgc cgtcattccc
      241 cttatctctg cctcgatggc gtacagttcg ccgatccgtt tcagcgcttc ctccgtcagg
      301 gctgacgggg tgcgaacgtg cacatcgtgg attttacggc gggcgtgagc ccaacaggcg
      361 gcttccgtta tccggccatc ccggtacagc tcgttgaacc cggcgtatgc atccgcctgc
      421 agtacaccac tgaaccccgc aagatgggtc tgcggatgga tgccttttct gtccgggctg
      481 taagcgaacc acaccgccgg cgccagcgtt gacccggcgt tacggtcgtc acgaacgtag
      541 gtccataacc gcccggtctt cgttttctta ttgcctggca acagcaccgg gacaggcgtg
      601 tcatcagcat ggagcttacc gtcagtcagc acatagtcct gaagcgcttc ttccagcggt
      661 gacagtagcc ggcagcatgc atccacccag cccgacagca gtgaacgact cagctccacg
      721 ccctggcggc cgtacatttc agactggcgg tacagcgggg tgtgctctgc atactttgag
      781 atcagcacgc gggccagcag ccccggtcct gcgatacccc gctcgatggg ccgtgaaggc
      841 gcgggggcct gcacgatggc atcgcactga gtacaggcat gcttttcacg tacagtccgg
      901 ataacccgga agacgctgcg catcaactcc agctgttcgg cggcatcctc acccagatag
      961 ctcagtgagc ctccacattc cgggcagcat gacgctgccg gcagcagccg tttttcatcg
     1021 cgggggagtg attcggggaa cggtttgcgg gtgcgggttt gacgcagcgg gcgctgcacg
     1081 gccgggtcgt caacccgacc ggtaagggta tcactttctt tctgaagtgc cttcaggtca
     1141 gcttccatct gtgcgatacg acgggagact ttttcggagc ggctgccgaa gttcatccgg
     1201 cgcagcttat ccagctgtgc ctgcagatgg tctatttcgc gttcacgctc gttcagcttt
     1261 tccagcaggg cacggttcag cgcctcctgt tcggcaagga gacgtttcag tgcattgata
     1321 tcgtcaggaa gtgagctgct cataccgggt atattaccag gctcattcag cgtcgaccag
     1381 gataaagagg cttacaacat agtcagggac gtaagcagtc ttttaggctg ccgccagtcg
     1441 ataccttcaa ggagcatcgc cagctgtgcc ggtgtgagga acactttgcc atcccgggct
     1501 gacggccagg cgaagcggcc gcgctccagc cgtttggtca gcagacacag tccatcgccg
     1561 gtagaccaga ggagctttac ctgactgcca ttacgcccac ggaagataaa aacgtgacct
     1621 gacatcggat cgtctttcag cgtcgtctgc acctttgccg ccaggcc
//
LOCUS       DADMHC010000340         1661 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.343, whole genome shotgun sequence.
ACCESSION   DADMHC010000340 DADMHC010000000
VERSION     DADMHC010000340.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.343"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(286..>1661)
                     /locus_tag="JNZ57_004103"
     CDS             complement(286..>1661)
                     /locus_tag="JNZ57_004103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HAY8830086.1"
                     /translation="RIEQGLYRHGDKLPSVRSLSQEHGVSISTVQQAYQTLETMKLIT
                     PQPRSGYFVAQRKAQPPVPPMTRPVQRPVEITQWDQVLDMLEAHSDNSIVPLSKSTPD
                     VETPSLKPLWRELSRVVQHNLQTVLGYDLLAGQRVLREQIARQMLDSGSVVTADDIII
                     TSGCHNSMSLALMAVCKPGDIVAVESPCYYGSMQMLRGMGVKVIEIPTDPETGISVEA
                     LELALEQWPIKGIILVPNCNNPLGFIMPDARKRAVLSLAQRHDIVIFEDDVYGELATE
                     YPRPRTIHSWDIDGRVLLCSSFSKSIAPGLRVGWVAPGRYHDKLMHMKYAISSFNVPS
                     TQMAAATFVLEGHYHRHIRRMRQTYQRNLALYTCWIREYFPYEICITRPKGGFLLWIE
                     LPEQVDMVCVARQLYRMKIQVAAGSIFSASGKYRNCLRINCALPLSETYREALKQIGD
                     AVYRAME"
BASE COUNT          396 a          463 c          422 g          380 t
ORIGIN      
        1 gcccttgcct gaaagcaagc gcgaaccatg gatcgagtac taatcagagg ctgatgacaa
       61 acgcaaagca gcctgatgcg ctacgcttat caggtctaca taatccatta aatatattga
      121 acttttaata ttttgtagac ctggtaaggc gttcacatgg catctggcat gaacgaagca
      181 cactttgcct aagccatgcc ggaacgtggc gatgtcgcta taaagataaa acgagtcaca
      241 ggttattcgt gagagtaaat caggggcctc ggcactaatt cgaatttatt ccattgcccg
      301 atacacggca tcgccaattt gctttagtgc ttcgcgatag gtttcgctga gcggcaaagc
      361 gcagttgatg cgcagacaat tacggtattt gccggaagcc gagaaaatcg agcctgccgc
      421 cacctggatt ttcatgcggt acagctgccg cgcgacgcag accatatcga cctgttcagg
      481 caattcgatc cacagtaaaa atccgccttt cgggcgcgta atacagattt cgtagggaaa
      541 atattcccgt atccagcagg tataaagcgc cagattgcgc tgataagtct gccgcatccg
      601 ccggatatgg cgatgatagt ggccttccaa cacaaacgtt gccgccgcca tttgcgtgga
      661 cggcacatta aagctgctga tggcgtattt catatgcatc agtttatcgt gataacgccc
      721 cggtgcgacc caacccacgc gcaggcctgg agcaatactt ttactgaacg agctgcacaa
      781 cagcactcgc ccgtcgatat cccatgaatg gatggtccgc gggcgcggat actccgttgc
      841 cagttcgccg tagacatcat cttcaaaaat cacaatatca tgacgctgag cgagagagag
      901 aacggcccgt ttgcgtgcgt ccggcataat aaatcccagc ggattattac agtttggcac
      961 cagaatgatg cctttaatcg gccactgttc cagcgccagt tccagtgctt caacgctgat
     1021 gccagtttct ggatcggttg ggatttcaat cactttcacg cccatgcctc gcagcatctg
     1081 catcgaaccg taataacagg gagattcgac cgcgacaata tcgcccggtt tacacaccgc
     1141 cattaacgcc agcgacatcg agttatggca gccgctggtg atgatgatgt catcggcggt
     1201 gaccaccgag ccgctgtcga gcatctggcg ggcaatctgc tcccgcaaca ctcgctgacc
     1261 ggctaacaag tcataaccga gcacggtttg tagattatgc tgcaccaccc ggcttagctc
     1321 acgccagagt ggtttcaggc tgggcgtttc gacatccggc gtgcttttgc ttaacggaac
     1381 aatggaattg tcgctatgcg cctccagcat atccagcacc tgatcccact gggtaatttc
     1441 caccgggcgc tgcaccggac gcgtcatcgg cggtacaggc ggctgggctt tacgttgtgc
     1501 gacaaaataa cccgaacgcg gctgcggagt gatgagcttc atcgtctcca gcgtctggta
     1561 cgcctgctgc acggtgctga tgctgacgcc gtgctcctga cttaagctgc gcaccgacgg
     1621 caatttatcc ccgtgacgat acagcccttg ctcaatccgc t
//
LOCUS       DADMHC010000341         1620 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.344, whole genome shotgun sequence.
ACCESSION   DADMHC010000341 DADMHC010000000
VERSION     DADMHC010000341.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1620)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1620)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1620
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.344"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(822..1061)
                     /locus_tag="JNZ57_004104"
     CDS             complement(822..1061)
                     /locus_tag="JNZ57_004104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858310.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase"
                     /protein_id="HAY8830087.1"
                     /translation="MPQVGVISPLLSNIILNEFDQYLNKRYLSGKARKDRWYWNHSIQ
                     RGRSTAVKENWQWKPAVAYCCYADDCVPRRRVLGT"
     gene            complement(1256..1620)
                     /locus_tag="JNZ57_004105"
                     /pseudo
     CDS             complement(1256..1620)
                     /locus_tag="JNZ57_004105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          365 a          451 c          386 g          418 t
ORIGIN      
        1 tcgtcaaaaa aaatcatctt cgtgaagttt tacgacatag cggaggagtt tgcttctttg
       61 aggtgcaggt tttcgtttgc gtggtttagc tgaacgggcc atataactac ctgaaagaca
      121 atgatattgt ctgtttttat aacggtaatc acaggccatg acaagccgca gccgtcaggc
      181 cgcctactcg gggcggttta gaacgcttat ttagtaccag atcttactta taataaaggg
      241 gcttggcagt ttggataaac tattgtcctt attccactaa tacaaacttt ttgtaaagta
      301 tattaaatat acttcatttc atactgaaat ccccggaagt attcaatcaa acaattacac
      361 cataaaagga agagggggcc ccaattaagt tgtcaagcat gtttactgcg caatcgcttg
      421 gtgctccgtc cctgtacccc gcattggtac tctggcgctc atggggcttc cacttgcgct
      481 tctcccttca catcggggtg acaggtccac gttccccaca agagcctgaa tcgacttcac
      541 gccgctttta tgccggatgc cgcgcaggca gtaaacatat cccacaggaa cgactccacc
      601 attgttttga catcatctat atgctttcga cacatcatca gcggttcact ttcgttcgtc
      661 tcttcgaacc atacctgatc ggctcacgtc cgaccttttc ccatctagct caccaccaca
      721 tctcttaaat gcagcagcag tggatggttt ggtgcctgcg cctgcacgcc gacaccgagg
      781 ggccttccct catctcttgt gccgcatggc tgcacaggga ctcacgtccc caggacgcgc
      841 cttcgtggca cacagtcatc ggcatagcaa cagtaagcaa cggcaggttt ccattgccag
      901 ttttctttga cagcagtact tcggcctcgc tggatactgt gattccagta ccagcgatcc
      961 tttctggctt ttccactcag gtagcgttta ttcagatact ggtcgaactc attcagtatg
     1021 atgttcgaca gcaacggcga gatcacaccg acctgtggca tactttcact gaccgcccgg
     1081 aagagaccaa catcaacacg gcgttttcca ccgcagtctc ataaaacgtg catcactgat
     1141 cctgcggcag acggctttca tcagcagccg gtgatgtact gtgtcgaagt agctggacag
     1201 gtcaccttca ataacccggc gccccgtgtt tccccgcagt cggtgagctg taatagtacg
     1261 tgatgtctcc cgcccacttc tggttcgggc cactggcgta aaaatcctgc gtcagcagat
     1321 tttctgatac aggcaggccg tgtgcacggt aactgatcgg gctgaacttc tgggaggctt
     1381 ttgcgctcag ttcctgacgg cgcagactgg ctgccacggt ttttacgtta aagtggtaac
     1441 cagagcacac agttcatccg tcaggcgtgg ggcaccgtaa cgctggactg ggtaaaagcc
     1501 ttgcggacaa cgctgtcgca gtgctgacgg aactgctgac gtgtgtttat ccttgtccgc
     1561 cgctgacacc acgtatacca gccgctgcgg gccacccgga gtacgcggca cattgccttg
//
LOCUS       DADMHC010000342         1600 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.345, whole genome shotgun sequence.
ACCESSION   DADMHC010000342 DADMHC010000000
VERSION     DADMHC010000342.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.345"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(89..1413)
                     /locus_tag="JNZ57_004106"
                     /pseudo
     CDS             complement(89..1413)
                     /locus_tag="JNZ57_004106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414838.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pyridine nucleotide-disulfide oxidoreductase"
BASE COUNT          443 a          371 c          316 g          470 t
ORIGIN      
        1 tgattaagaa gttatagagt aacagggaat taataagatt cttttctctg agacgccaga
       61 atatttgttc tggcgtctga ttttgagttt atttgactaa tgaaaataga tcattgagtg
      121 attcgctcat cgacggatga gtaaatatct gatcgcgtaa tatgctataa ggcagcccgg
      181 catccatcac cattttacta tattaatcat ctcgtgggag tcaacacaca gcagtgatgc
      241 ccctaatata cgttgggttt tattatcaac aatcgctttt aataccccac gggtatcgtt
      301 catcactctg gcacgcggaa ttgcagctac aggcaatatc accacctgaa tatcagcacc
      361 actctctctg gcttgttctt ctgtcatacc aaccctggac aggggcggtg tcataaatac
      421 ggaataaggc acatttttcc gatcatcagt actacgtttg ccttcaccca gtaactcatc
      481 acgtacaatg cggtaatcat ccagtgatat gtaagtaaat tgcagcccgc cggtaacatc
      541 tcccatcgcc caaatattgt ctgcggtggt atgtaatcgc ttgtcaacga caattgcccc
      601 gcgctcgttt actgcgatac cggcattttc tggatgtaac gaagcggtag ccggttgacg
      661 accggaagct attaacagtg catccaccgc cagttgggcg tgctcgctat gcacttgcac
      721 ttgattttca tggtgactga ttcgctccac atgggcattg aggataatat cgacgccctg
      781 atcgcgtaaa atcgtcgcga tattatcagc aatatcccga tcttcccgag gcaaaaacag
      841 cgaagctgct tctaaaatgg ttaccttgct gccaaaatta gcgaacatag aggcgaactc
      901 aacgccaata tatccgccgc ccaaaatacc taaatgccca ggcaattctt ttagattaaa
      961 taatccggtg ctgtcatata ctcctggcgt ggtggtaatt ccaggaattg gcggaaccac
     1021 ggtttgtgca ccggtattaa taaaaatttt ctcgccatga atctccagat ttccctcagg
     1081 ccgatgaaca cgcaggctat gattattgat aaactccgcc tggccgtcga tcacgtcgat
     1141 attaggcata tccgcaagat tatgaaaatt cttattacgt aaaaaattaa ccacttcatt
     1201 tttacgctgt atggcacgga caaaatctgt gtgctgctgt gcgtcatgaa ccaatgtttt
     1261 agttgggatg cagccgatat taatacaggt cccgccatac attgcatttg attgttcgat
     1321 gagagccact cgccaacctg cttttgccag cgtgacggct aatgtttttc cagccttgcc
     1381 aaaaccaata ataactgcct gatatttatt catgatgatt tcctgtcgaa acgcgttcat
     1441 ttgacatcat gactatagac gcaaaagagc aaataccatt tcttcacaac gcttgatatt
     1501 ttgtcttatc gtctggtatt ttctttttcc taatcagaat cacaaaacaa aaatcatgat
     1561 taactatttg atggtattag attagttatt tactaagatt
//
LOCUS       DADMHC010000343         1553 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.346, whole genome shotgun sequence.
ACCESSION   DADMHC010000343 DADMHC010000000
VERSION     DADMHC010000343.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1553)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1553)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1553
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.346"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            261..1235
                     /gene="hemB"
                     /locus_tag="JNZ57_004107"
     CDS             261..1235
                     /gene="hemB"
                     /locus_tag="JNZ57_004107"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308450.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HAY8830088.1"
                     /translation="MTDLIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDY
                     KAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISHHTDETGSDAWREDGLVARM
                     SRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAADAD
                     FIAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKS
                     YQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEY
                     AMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAEKKILR"
     gene            complement(1341..>1553)
                     /gene="tauD"
                     /locus_tag="JNZ57_004108"
     CDS             complement(1341..>1553)
                     /gene="tauD"
                     /locus_tag="JNZ57_004108"
                     /EC_number="1.14.11.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308449.1"
                     /note="catalyzes the conversion of taurine
                     (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde
                     concurrently with the conversion of alpha-ketoglutarate to
                     succinate and carbon dioxide; non-heme iron oxidase;
                     allows the use of taurine as an alternative sulfur source;
                     forms homodimers; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine dioxygenase"
                     /protein_id="HAY8830089.1"
                     /translation="SEKESEALLGFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYA
                     NADYLPQRRIMHRVTILGDKPFYRAG"
BASE COUNT          397 a          402 c          381 g          373 t
ORIGIN      
        1 atcttatcaa tatacaacaa agtttgaatt attcaattta tagcagcaca accaaacgcc
       61 aaaaaaaata ataaccaaga gctataaata aagattaaaa atattttcag tgaatatgaa
      121 cttattgcta tttctattac aaagatgtcc tggtctctct ttcattctct tcttgtcaac
      181 atcacgacaa ctttcgtaaa acactcctgc cccgcttcag gtatactgtg caccttaatt
      241 ccacaaacat caggcagacc atgacagact taatccaacg ccctcgtcgc ctgcgcaaat
      301 ctcctgcgct gcgcgctatg tttgaagaga caacacttag ccttaacgac ctggtgttgc
      361 cgatctttgt tgaagaagaa attgacgact acaaagccgt tgaagccatg ccaggcgtga
      421 tgcgcattcc agagaaacat ctggcacgcg aaattgaacg catcgccaac gccggtattc
      481 gttccgtgat gactttcggc atctctcacc ataccgatga aaccggcagc gacgcctggc
      541 gggaagatgg actggtggcg cgtatgtcgc gcatctgcaa gcagactgtg ccagaaatga
      601 tcgtcatgtc agacacttgt ttctgtgaat acacttctca cggtcactgc ggtgtgctgt
      661 gcgagcatgg cgtcgacaac gacgcgactc tggaaaattt aggcaagcaa gccgtggttg
      721 cagctgctgc agacgcagac ttcatcgccc cttccgccgc gatggacggc caggtacagg
      781 cgattcgtca ggcgctggac gctgcaggct ttaaagatac ggcgattatg tcgtattcga
      841 ccaagttcgc ctcttccttt tatggcccgt tccgtgaagc tgccggaagc gcattaaaag
      901 gcgaccgcaa aagctatcag atgaacccaa tgaaccgtcg cgaggcgatt cgtgagtcac
      961 tgctggatga agcccagggc gcagactgcc tgatggttaa acctgctgga gcgtacctcg
     1021 acatcgtgcg tgagctgcgt gaacgtactg aattgccgat tggcgcgtat caggtgagcg
     1081 gtgagtacgc gatgattaag ttcgccgcgc tggcgggtgc tatagatgaa gagaaagtcg
     1141 tgctcgaaag cttaggttca attaagcgtg cgggtgcgga tctgattttc agctactttg
     1201 cgctggattt ggctgagaag aagattctgc gttaattttt ttcctctcag aaagggggag
     1261 ttaacctgtt gaaagtacgg tgaacgcccc ctcaccctaa ccctctcccc aagggggcga
     1321 gggaaccgtc cgcactcgta tcaccccgcc cgataaaacg gtttatcccc aagaatcgtc
     1381 acccgatgca taatccgccg ctgtggcagg taatcggcat tggcatagtg ctgagtcacg
     1441 cggttatccc aaatcgcaat atcattcggt tgccagcgcc aacgcacctg aaactccggt
     1501 ttagtgatat gggcgaataa aaagcctaac aaggcttcgc tctctttctc gct
//
LOCUS       DADMHC010000344         1521 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.347, whole genome shotgun sequence.
ACCESSION   DADMHC010000344 DADMHC010000000
VERSION     DADMHC010000344.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.347"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            6..1521
                     /locus_tag="JNZ57_004109"
                     /pseudo
     CDS             6..1521
                     /locus_tag="JNZ57_004109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415051.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase FdrA"
BASE COUNT          337 a          400 c          449 g          335 t
ORIGIN      
        1 ttgtcatgat ccacgccttt attaaaaaag ggtgttttca ggattcggtc agtttaatga
       61 ttatttcacg aaaactcagc gaatcagaaa atgttgatga tgtttccgta atgatgggta
      121 cgcccgccaa taaagcgtta ttagatacca caggtttctg gcatgacgat tttaataacg
      181 ccacgccgaa cgatatttgc gtggcaattc gtagcgaagc ggcggatgcg gggatcgcgc
      241 aggcgattat gcagcagctt gaagaggcgc taaaacaact ggcgcagggg gcaggcagca
      301 gccagtcctt gacgcaggtg cgtcgctggg acagtgcctg tcagaaatta tccgatgcca
      361 atctggcgct gatttcagtg gctggcgagt atgcggcgga gctggcgaat caggcgctgg
      421 atcgcaacct caacgtgatg atgttctccg ataacgtcac gctggaagat gaaatccaac
      481 ttaaaacccg cgcgcgagaa aaaggcttgc tggtgatggg gccggactgc ggtacgtcga
      541 tgattgccgg cacgccgctg gcttttgcta acgtgatgcc ggaaggcaac attggcgtca
      601 ttggcgcttc cggtaccggg attcaggaac tgtgttcgca gattgcgcag gcaggggagg
      661 gaattactca cgcgattggt cttggcgagc gcgacctcag ccgtgaagta ggcggcatca
      721 gtgcgctgac ggcgctggaa atgctcagtg cagacgagaa aagcgaagtg ctggcatttg
      781 tttcaaagcc acctgccgaa gctgtgcgtc tgaaaattgt taatgccatg aaagcaaccg
      841 gcaaaccgac ggtggcgctg tttttaggtt ataccccggc ggtggcccgc gacgagaatg
      901 tctggtttgc ctcctcgctg gatgaggccg cacgcctggc ttgcctgctt tcacgcgtca
      961 cggcgcgacg taacgcaata gcgcctgtca gcagcggatt tatttgcggt ttgtatacca
     1021 gcggtacgct ggctgccgaa gcggcgggat tacttgctgg acaccttggc gtggaagccg
     1081 acgataccca tcatcacggc atgatgctcg acgccgatgg tcaccagatt attgacctcg
     1141 gcgatgattt ctacaccgtc gggcgtcccc atccgatgat cgacccagcc ttacgcaacc
     1201 agttaattgc cgatctcggc gctaaaccac aagtgcgcgt attgctactt gatgtcgtga
     1261 ttggcttcgg tgcgactgcc gatcctgccg cctcgctggt aagcgcctag caaaaagcct
     1321 gtgccgcgcg ttcagataat caaccactgt atgccattgc cacggtgaca ggcactgaac
     1381 gtgacccgca atgccgctcg cagcaaatcg ccacgctgga agatgcgggg atcgcggtag
     1441 tgagttcgct gccggaagcc accttgctgg cggcagcgtt aatttatccg ctctcgcctg
     1501 ccgcacagca acatacaccg t
//
LOCUS       DADMHC010000345         1507 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.348, whole genome shotgun sequence.
ACCESSION   DADMHC010000345 DADMHC010000000
VERSION     DADMHC010000345.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.348"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            48..1481
                     /gene="amn"
                     /locus_tag="JNZ57_004110"
     CDS             48..1481
                     /gene="amn"
                     /locus_tag="JNZ57_004110"
                     /EC_number="3.2.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP nucleosidase"
                     /protein_id="HAY8830090.1"
                     /translation="MHPAQALDKLDALYEQSVVALRNAIGNYITSGELPDENARKQGL
                     FVYPSLTVTWDGSTTNPPKTRAFGRFTHAGSYTTTITRPTLFRSYLNEQLTLLYQDYG
                     AHISVQPSQHEIPYPYVIDGSELTLDRSMSAGLTRYFPTTELAQIGDETADGIYHPTE
                     FSPLSHFDARRVDFSLARLRHYTGTPVEHFQPFVLFTNYTRYVDEFVRWGCSQILDPD
                     SPYIALSCAGGNWITAETEAPEEAISDLAWKKHQMPAWHLITADGQGITLVNIGIGPS
                     NAKTICDHLAVLRPDVWLMIGHCGGLRESQAIGDYVLAHAYLRDDHVLDAVLPPDIPI
                     PSIAEVQRALYDATKLVSGRPGEEVKQRLRTGTVVTTDDRNWELRYSASALRFNLSRA
                     VAIDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANRFYEGAISEHLQIGI
                     RAIDLLRAEGDRLHSRKLRTFNEPPFR"
BASE COUNT          374 a          391 c          351 g          391 t
ORIGIN      
        1 cttgtaatgg gttaagtgat aacagatgtc tggaaatata ggggcaaatc cacccagctc
       61 aggcactgga taaactcgac gcgctgtatg agcaatctgt agtcgcatta cgcaacgcca
      121 ttggcaacta tattacaagt ggcgaattac ctgatgaaaa cgcccgcaaa caaggtcttt
      181 ttgtctatcc atcactgacc gtaacctggg acggtagcac aaccaatccc cccaaaacgc
      241 gcgcatttgg tcgctttacc cacgcaggca gctacaccac cacgattact cgccctactc
      301 tctttcgttc gtatcttaat gaacaactta cgttgctgta tcaggattat ggtgcgcata
      361 tctcagtgca accctcgcag catgaaatcc cttatcctta tgtcatcgat ggctctgaat
      421 tgacacttga tcgctcaatg agcgctgggt taactcgcta ctttccgaca acagaactgg
      481 cgcaaattgg cgatgaaact gcagacggca tttatcatcc aactgaattc tccccgctat
      541 cgcattttga tgcgcgccgc gtcgattttt ccctcgcacg gttgcgccat tataccggta
      601 cgccagttga acattttcag ccgttcgtct tgtttaccaa ctacacacgt tatgtggatg
      661 aattcgttcg ttggggatgc agccagatcc tcgatcctga tagtccctac attgcccttt
      721 cttgtgctgg cgggaactgg atcaccgccg aaaccgaagc gccagaagaa gccatttccg
      781 accttgcatg gaaaaaacat cagatgccag catggcattt aattaccgcc gatggtcagg
      841 gtattactct ggtgaatatt ggcataggac cgtcaaatgc taaaaccatc tgcgatcatc
      901 tggcagtgct acgcccggat gtctggttga tgattggtca ctgtggcgga ttacgtgaaa
      961 gtcaggccat tggcgattat gtacttgcac acgcttattt acgcgatgac cacgttcttg
     1021 atgcggttct gccgcccgat attcctattc cgagcattgc tgaagtgcaa cgtgcgcttt
     1081 atgacgccac caagctggtg agtggcaggc ccggtgagga agtcaaacag cggctacgta
     1141 ctggtactgt ggtaaccaca gatgacagga actgggaatt acgttactca gcttctgcac
     1201 ttcgttttaa cttaagccgg gccgtagcaa ttgatatgga aagtgcaacc attgccgcgc
     1261 aaggatatcg tttccgcgtg ccatacggga cactactgtg tgtttcagat aaaccgttgc
     1321 atggcgagat taaacttccc ggtcaggcta accgttttta tgaaggcgct atttccgaac
     1381 acctacaaat tggcattcgg gcgatcgatt tgctgcgcgc agaaggcgac cgactgcatt
     1441 cacgtaaatt acgaaccttt aatgagccgc cgttccgata ataagttctg aaccttctca
     1501 tcagaaa
//
LOCUS       DADMHC010000346         1500 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.349, whole genome shotgun sequence.
ACCESSION   DADMHC010000346 DADMHC010000000
VERSION     DADMHC010000346.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1500)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1500)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1500
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.349"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            215..1159
                     /locus_tag="JNZ57_004111"
     CDS             215..1159
                     /locus_tag="JNZ57_004111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000628767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF551 domain-containing protein"
                     /protein_id="HAY8830091.1"
                     /translation="MITITKGRLLTIKQWRETYGPGSNVVLPAEEAEELARIALASLE
                     ADPVKRVNSDQMHRVCLEANRYLDKYDAMAKEVNKLLGRIAPPAPVFNGEYGDAYQGA
                     REDLSIWKRRALEADEHVRRLEQINDHMVKEAQGESRMGEPVIREPAPVVPEEATPEN
                     VEMLSGYVSTYKLTDSERDIAAEIWNACRAAMLQSGNFRENKNSSTNNFREIAETSTN
                     YPAIPSEVLSAILKVARIRADFDDFDGDRRGIGDCLDEAEQELIVTINKYASQLAAEP
                     IAPNDVREQTAIPQVPVTPDGWISCSERMPDDRQEVNQ"
     gene            1244..1486
                     /locus_tag="JNZ57_004112"
     CDS             1244..1486
                     /locus_tag="JNZ57_004112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4222 domain-containing protein"
                     /protein_id="HAY8830092.1"
                     /translation="MFALIQRGQIYTDRAGYPVVITRITEHSVFFRRMDGRSGRVRIG
                     ELNCLFEHIDHQEYRKILADTEQEKHLKKLRAIKRK"
BASE COUNT          433 a          320 c          419 g          328 t
ORIGIN      
        1 gattacttca cgttgttaac ggaagagtac ggaaagtaca tggatggccc aggggtaatt
       61 gctgttgggg taatcctgac gataagccat ttaccgggaa taagcaggtt gaatgcgatt
      121 acatgttatc tgcattaagg cgcatggagt tgagagggca ccttaatgaa atatatgacg
      181 gtgtgattgt taataagaaa gaaggaaacg cggcatgatc actattacca aagggcgact
      241 gctgacaatc aagcagtggc gcgaaacata cggaccgggt agcaacgttg tactgccagc
      301 agaagaagcg gaagaactgg cacggattgc actggcatca ttggaagcag atccagttaa
      361 acgagttaac tcagatcaga tgcaccgagt ctgcttagaa gctaatcgct atttagataa
      421 atatgacgcg atggcgaaag aggtaaataa gttgcttgga cgcatcgccc cgccagcgcc
      481 agtatttaac ggcgaatacg gtgacgcata tcagggcgct cgtgaagacc tgtccatctg
      541 gaaacggcga gcgcttgaag ctgatgagca cgttcggcga ctggagcaaa tcaatgacca
      601 catggtgaaa gaggcgcagg gagaatcacg catgggcgag cctgtaatac gtgagccagc
      661 accggtagtg cctgaagaag caactccgga aaacgtagaa atgctctctg gctatgtttc
      721 aacgtacaaa ttaaccgata gcgagcgcga tattgctgcc gaaatatgga acgcctgccg
      781 cgccgccatg cttcagtccg gaaactttcg ggaaaacaag aattcgtcaa ccaataattt
      841 tcgggaaatc gcggaaacgt caaccaacta tccggcaatt cctagtgagg tgttgtccgc
      901 aatcctgaag gttgccagga ttcgtgccga tttcgatgat tttgacggtg acaggcgagg
      961 tatcggtgat tgtctggatg aggctgagca agagcttatc gttaccatta acaaatatgc
     1021 cagtcagttg gcagcagaac ctatagcgcc taatgacgtt cgagagcaga cagccattcc
     1081 acaagttccg gtaactccgg atggttggat aagctgtagt gagcgaatgc cggacgacag
     1141 gcaggaggtg aatcaatgag ctggcctgat gcaatcgtaa ctctgggggt ggtattcgca
     1201 gcagcgtttg ttgtgttctc gatttgtcga tggggataac cacatgttcg ctttgattca
     1261 acgcggtcag atatacacgg acagagctgg ataccccgtg gtgattactc gcatcactga
     1321 gcactcagtg ttctttcgac ggatggacgg acgatccggg cgggtacgca ttggtgagtt
     1381 aaactgcctg ttcgaacata ttgaccacca ggagtaccgc aaaattctcg cggacactga
     1441 gcaggaaaag cacctgaaaa aattacgagc cataaaaagg aagtaaagaa tgaataaagc
//
LOCUS       DADMHC010000347         1496 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.350, whole genome shotgun sequence.
ACCESSION   DADMHC010000347 DADMHC010000000
VERSION     DADMHC010000347.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1496)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1496)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1496
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.350"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            93..565
                     /locus_tag="JNZ57_004113"
                     /pseudo
     CDS             93..565
                     /locus_tag="JNZ57_004113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000489016.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            complement(611..687)
                     /locus_tag="JNZ57_004114"
     tRNA            complement(611..687)
                     /locus_tag="JNZ57_004114"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(651..653),aa:Arg,seq:tct)
     gene            930..>1496
                     /gene="fimZ"
                     /locus_tag="JNZ57_004115"
     CDS             930..>1496
                     /gene="fimZ"
                     /locus_tag="JNZ57_004115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria biosynthesis transcriptional regulator
                     FimZ"
                     /protein_id="HAY8830093.1"
                     /translation="MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDY
                     LRTRPVDLIIMDIDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANG
                     FVSKCNDQNDIFHAVQMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRY
                     LVSGLSNKEIADKLLLSNKTVSAHKSNIY"
BASE COUNT          438 a          329 c          320 g          409 t
ORIGIN      
        1 atctgttgtt tttaaataag aacttaacct gtgtaaagcc ctggtcgcgg ctggcaaccc
       61 cggttatcac ttgtcatagc cgtacaccgg aagtgttccg gctagccgcc aaccacagca
      121 agcagcaacc cagcaaaccc tgcgaagcgg agttgacgcg cgcattactt tttaccgtat
      181 tgtctaactt tcttgagcaa tcgcggttta ttgccctact gatgtatatc ttacgcagca
      241 gcgtccgcga cagcgtctgc cgcattattc aaagcgatat tcagcattac tggaatctgc
      301 gaattgtcgc cagttcgcta tgtttaagcc ccgcctgctc aaaaagaaat taaaaaacga
      361 aaataccagc tatagccaga ttgtcacaga gtgtcgtatg cgttacgccg tacagatgtt
      421 attgatggat aacaaaaata tcactcaggt ggcgcaatta tgtggctata gcagcacgtc
      481 gtactttatc tctgttttta aggcgtttta cggcctgaca ccgttgaatt atctcgccaa
      541 acagcgacaa aaagtgatgt ggtgaagggc aaagcggaaa cggataagac gggcataaat
      601 gaagaagaaa tggcgcgccc tgcaggattc gaacctgcgg cccacgactt agaaggtcgt
      661 tgctctatcc aactgagcta agggcgcgtt gataccgcaa tgcggtgtaa tcgcgtgaat
      721 tatacggtca acccttgctg agtcaatggc ttttgatctg gttgctgaac aagtgaacga
      781 ccgcgtctga ttttctgatt tatttcgcta tagcggcaaa caaacgcaca ccgctgcgcg
      841 tctgaatcaa gaaaacccgt attttcatgt atcaaagtac aatttaccgc cctaacggaa
      901 aattgtccgc tcctatgaga ctggtaacta tgaaaccaac gtcggtgatc attatggata
      961 ctcatcctat catcagaatg tctattgaag ttctgttgca aaaaaacagt gaattgcaga
     1021 ttgtcctgaa aacggatgat taccgcataa ccatcgatta tctccgaacc cgtcctgttg
     1081 atttaatcat tatggatata gacttgcccg gaacagacgg ttttaccttc ctgaaaagga
     1141 tcaaacaaat ccagagcaca gtgaaagtgt tatttttatc atcgaaatca gaatgctttt
     1201 atgctggcag agcgatacaa gctggtgcta acggttttgt cagtaaatgc aatgatcaga
     1261 atgatatttt tcatgccgtt cagatgatcc tctccggata cacgtttttt cccagcgaaa
     1321 cgcttaacta tataaaaagc aataaatgta gtacgaatag ttcaacggtc actgtgctat
     1381 ctaatcgtga agtgaccata ttacgttatc tggttagcgg attatctaat aaagaaattg
     1441 ccgataagtt attgcttagc aataaaacag ttagtgcgca taaatctaat atttat
//
LOCUS       DADMHC010000348         1452 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.351, whole genome shotgun sequence.
ACCESSION   DADMHC010000348 DADMHC010000000
VERSION     DADMHC010000348.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1452
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.351"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            489..>1452
                     /locus_tag="JNZ57_004116"
     CDS             489..>1452
                     /locus_tag="JNZ57_004116"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HAY8830094.1"
                     /translation="MPLPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSILIDAVKNK
                     ITAGEVKHDITESMLELATDVCRDINQAAGQFSAMQKVVLQAAADHHLEICGGGTHPF
                     QKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPH
                     FIALSAASPYMQGTDTRFASSRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMID
                     SIKDLHWDIRPSPHFGTVEVRVMDTPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKD
                     YLLYKFNRFQDCRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPS"
BASE COUNT          371 a          380 c          330 g          371 t
ORIGIN      
        1 actatgactg ccgcaagggc atatttcgtc agcatgttta tattgcctcc atgcgaagaa
       61 gggactacca tccaaattgt tcaggtttgg gtaggtagcc ccagggttga tagaaatatc
      121 gtcctggggc ttcatctttc cagacctcag agtaaacctg aaaccggaaa gcttcaggca
      181 cccgcagtta tcttaccctt gcttagcaaa atagctgttt atttatacag taagtcctgt
      241 ttcggacttc tcactcccca tttgatcaac tgaagctgaa cccgtttttt tctgcatgcc
      301 tcaatcgtca aaattcttcg ccaccagtca gcactgccat aacttgtcac attgcaaaag
      361 tagccaaatt gcttctgtca taatcagttc accatcacca aaaaaaagaa acattccaga
      421 acttccgcat ctcgcccagc cgctcccact tctatactga atagaaaacg ccaacataag
      481 agaaacctat gccattaccc gattttcatg tttctgaacc ttttacactc ggtattgaac
      541 tggaaatgca ggtggttaat ccgccgggct atgacttaag ccaggactct tcaatactga
      601 ttgacgcggt taaaaataag atcacggccg gagaggtaaa gcacgatatc accgaaagta
      661 tgctggagct ggcgacggat gtttgccgtg atatcaacca ggctgccggg caattttcag
      721 cgatgcagaa agtcgtattg caggcagccg cagaccatca tctggaaatt tgcggcggtg
      781 gcacacaccc gtttcagaaa tggcagcgac aggaggtatg cgataacgag cgctatcaac
      841 gaacgctgga aaactttggt tatctcattc aacaggcgac cgtttttggt cagcatgttc
      901 atgttggctg cgccagtggc gatgacgcca tttatttgct gcacggcctg tcacggtttg
      961 tgccgcactt catcgccctt tccgccgcgt cgccatatat gcaaggaacg gatacgcgtt
     1021 ttgcctcctc acgaccgaat attttttccg cctttcctga taatggtccg atgccgtggg
     1081 tcagtaactg gcaacaattt gaagccctgt ttcgctgtct gagttacacc acgatgatcg
     1141 acagcattaa agatctgcac tgggatattc gccccagtcc tcattttggc acggtggagg
     1201 ttcgggtgat ggataccccg ttaaccctta gccacgcggt aaatatggcg ggattaattc
     1261 aggctaccgc ccactggtta ctgacagaac gcccgttcaa acatcaggag aaagattacc
     1321 tgctgtataa attcaaccgt ttccaggact gtcgctatgg gctggaaggc gtcattaccg
     1381 atccgcacac tggcgatcgt cgaccgctaa cggaagacac cttgcgattg ctggaaaaaa
     1441 tcgccccttc cg
//
LOCUS       DADMHC010000349         1451 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.352, whole genome shotgun sequence.
ACCESSION   DADMHC010000349 DADMHC010000000
VERSION     DADMHC010000349.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1451)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1451)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1451
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.352"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(127..463)
                     /locus_tag="JNZ57_004117"
                     /pseudo
     CDS             complement(127..463)
                     /locus_tag="JNZ57_004117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502602.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1036..1362)
                     /locus_tag="JNZ57_004118"
     CDS             complement(1036..1362)
                     /locus_tag="JNZ57_004118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000477619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830095.1"
                     /translation="MFKYAEMLMAEEDDKVCELIFKQQDNLILKINDRFPRIIIKKYR
                     TLQGKVVWLWILPFVIEWLILCALGVNSWRGKSKYPDYYLLGDEMPVRLVSIIFPTLL
                     ALFLLA"
BASE COUNT          467 a          273 c          248 g          463 t
ORIGIN      
        1 tccactagtt gaaaaggtgg gcacctacgt taccaataca ggcttaatgg ctacatacgg
       61 cggtcagttt acgcttacaa taaatatgaa aagatggttt aaataccccg ttacttttga
      121 cttacactat acggtatcgc atcgtttaat attcgcaccg gccagatttt tatttctatt
      181 agttgtcaca atactgaatg cgtacgacca cagtattctg gctcctgtgt ggtcatgctt
      241 taattctgcg ttccggacag ataagcagtt gcttgcagga atccttcttg tgttaatgtc
      301 agttcccctt tttaccagtg ctgatttcca cattccgtcc aacagagctt atagcctttc
      361 cctggattat agcattgtcc ggctgaagtt ctttttgaat aataatagaa gcactgctgg
      421 cagatccagt ccgtttttca taacccactg tactgataac cataatctaa tcagtagaaa
      481 ttgagtcgaa aataagcact actccataca ggataattag aggtcagttt gattattcac
      541 aattcatcat cagcattttc tgtttctgac gaaatcaaca tgaaaagaac catatatgat
      601 aattattata ataacggctt taattggaat acatatatta caacgtatta tatataattg
      661 gtattctggg aactatattc tcaaaataca gtagaaacga ggtatgtttc tggtggaaag
      721 gacagtggga ttaaaaagta agaattgata aaaaaacgcc agcaacacat agtgccggcg
      781 gagggaatac cccatggaga aaatgtgatg cctagagcac catgaatata taattaaaaa
      841 tagttagcgt tgtcaatact ttcacaaaaa taattttcgt agtttcgtag tttcgtagtt
      901 tcgtagtttc gtagtttcgt agtttcgtag tatagaaaga tatttttatg catgacctac
      961 ctgaatttgc tccgggtaga ggttataaat aaaaattgaa tcacgacaaa cacaatattc
     1021 atagtatggc gatgcctacg ccagcaagaa tagcgccaat aatgttggga atataataga
     1081 caccagacgc acaggcatct catctcctaa caaataataa tcagggtatt tacttttgcc
     1141 tcgccagctg tttacgccta aagcacacaa gattaaccat tcaataacaa atggcaatat
     1201 ccatagccat acgactttac cttgtaatgt tcggtatttc tttataatta ttctgggaaa
     1261 tctatcattt atttttaaaa tcaaattatc ttgttgttta aaaataagtt cacatacttt
     1321 atcatcttct tccgccatca acatctctgc atacttaaac atttcagaac gttcctttag
     1381 cacagaagag taattatatg tccagttccc aggcaataat gcttatggat atttaattaa
     1441 taatttagag a
//
LOCUS       DADMHC010000350         1422 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.353, whole genome shotgun sequence.
ACCESSION   DADMHC010000350 DADMHC010000000
VERSION     DADMHC010000350.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1422)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1422)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1422
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.353"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            29..1354
                     /locus_tag="JNZ57_004119"
     CDS             29..1354
                     /locus_tag="JNZ57_004119"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000398457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HAY8830096.1"
                     /translation="MEGGWNEGGKGISIADVMTAGAHGVPREVTEGVIDGLNYPNHEA
                     IDFYHRYKTDIQLFAEMGFKCFRTSIAWTRIFPQGDEQEPNEEGLQFYDDLFDECLKQ
                     GMEPVVTLSHFEMPYHLVTKYGGWRNRKLIDFFIRFASTVFTRYKEKVKYWMTFNEIN
                     NQVNFSESLCPFTNSGILYSPEEDINEREQIMYQAVHYELVASALAVQTGKSINPEFN
                     IGCMIAMYPIYPLTCVPNDMMMATKAMHRRYWFTDVHARGYYPQHMLNYFARKGFNLD
                     ITPEDNAILASGCVDFIGFSYYMSFTTQFSPDNPQLDYVEPRDLVSNPYIDTSEWGWQ
                     IDPAGLRYSLNWFWDHFQLPLFIVENGFGAVDQRQADGTVNDHYRIDYFASHIREMKK
                     AVVEDGVDLIGYTPWGCIDLVSAGTGEMKKRYGMIYVDKDNEGNAGTDT"
BASE COUNT          394 a          290 c          355 g          383 t
ORIGIN      
        1 atggggcggc gcggtagccg cgcatcagtt ggaaggtggc tggaatgaag gaggaaaagg
       61 catcagtatc gctgatgtga tgactgctgg cgctcacggg gtgccgcgtg aagtgacaga
      121 aggcgttatc gacgggctta attatcccaa tcatgaagca attgattttt atcatcgcta
      181 taaaacagat attcagttat ttgccgagat gggattcaaa tgctttcgaa cttccattgc
      241 ctggacacga atctttccgc aaggtgacga acaggagccg aatgaagagg gtttacaatt
      301 ttatgatgat ctgttcgatg aatgccttaa gcagggaatg gaacctgtgg tgacgctttc
      361 acattttgag atgccttatc atctggtgac aaaatatggt ggctggcgaa accgtaaact
      421 gatcgacttt tttatccgct tcgcatcaac ggtcttcacg cgctataaag aaaaagtaaa
      481 gtactggatg acgtttaacg aaatcaataa tcaggtgaat ttcagcgaaa gcctgtgtcc
      541 atttactaat tccggtatct tgtattcgcc agaggaagat atcaatgagc gcgaacaaat
      601 aatgtaccag gcggtacatt acgagttagt tgccagtgcc ctggcggtac agactggaaa
      661 atcgatcaat cctgaattta acattggctg tatgatcgcc atgtatccca tctatcctct
      721 gacgtgtgta cccaacgata tgatgatggc cacgaaagca atgcatcgtc gttactggtt
      781 tactgatgtt catgctcgtg gatattatcc gcaacatatg ctgaattact ttgccaggaa
      841 aggattcaac ctcgatatca caccagaaga taacgcgatt cttgccagtg gttgtgtcga
      901 ctttatcggc tttagctact acatgtcttt tacgacacaa ttttcgcccg ataacccgca
      961 actggattat gttgaaccac gagatttggt cagcaaccct tatatcgata catccgaatg
     1021 gggatggcaa attgatccgg cagggctacg ttattcactc aactggttct gggatcattt
     1081 ccagttgccg ctgtttattg tcgaaaatgg atttggtgcg gttgaccaga gacaagctga
     1141 cggcacggtg aacgatcact atcgcattga ttactttgct tcccatattc gggaaatgaa
     1201 aaaagccgta gttgaagatg gtgttgactt aattggctac accccgtggg gctgcattga
     1261 cctggtttct gccggaacag gggaaatgaa aaagcgctac ggaatgattt atgtcgataa
     1321 agacaacgaa gggaacgctg gaacggatac gtaaagcgtc gttttactgg tatcgggatc
     1381 tcatcgccaa caatggcgaa aatatttgag acttgaggaa ga
//
LOCUS       DADMHC010000351         1369 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.354, whole genome shotgun sequence.
ACCESSION   DADMHC010000351 DADMHC010000000
VERSION     DADMHC010000351.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1369)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1369)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1369
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.354"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            443..1192
                     /locus_tag="JNZ57_004120"
     CDS             443..1192
                     /locus_tag="JNZ57_004120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HAY8830097.1"
                     /translation="MKRQLFTLSIVGVFSLNTFASFPPGNDVTTKPDLYYLTNDNAID
                     SLALLPPPPQIGSIAFLNDQAMYEKGRLLRNTERGKLAAEDANLSSGGVANVFSAAFG
                     SPITAKDSPELHKLLTNMIEDAGDLATRSAKEYYMRIRPFAFYGVSTCNTKEQDTLSR
                     NGSYPSGHTSIGWATALVLSEINPARQDTILKRGYELGDSRVICGYHWQSDVDAARIV
                     GSAIVATLHSNPVFQAQLQKAKDEFANNQKK"
BASE COUNT          378 a          280 c          285 g          426 t
ORIGIN      
        1 gagtggtgga ttagcccggc aggtgggcgc tggctcctga gcaccataaa cagggcttta
       61 cccgtcaata ttggctcctt ctgatgccat tctatttcag gaaggagtgt ccgttaaact
      121 caggctacct caaaaagtta tcggtgcgtt tatcgaaaaa catatgttct actaattgga
      181 gtcattgtct gtaaaagcaa ctcaaaaata caagttgctt attccccttg ttggtaagaa
      241 cttaattcta actgtttgtt ctgggtgttt taaacgtcct cctttttatg cttgttcata
      301 acggatattt aataggtaac ctttgtttta gcatcttctg atttatttaa attatgtgat
      361 agtgcacaca attttattat ccagtacttt atactcttaa taaaataatt ataaatattt
      421 atcctctata aggagatgtt atatgaaaag acagcttttt actcttagta ttgtcggggt
      481 attttcttta aatacctttg catcattccc tccgggaaat gatgtgacaa caaaacctga
      541 cctttactac ctgacaaacg ataatgctat tgacagtctg gcattattac cgcctccacc
      601 acaaatcgga agtattgcct tcctgaatga ccaggccatg tatgaaaagg ggcgtttatt
      661 gcgaaatact gaaagaggga agctggcagc tgaggatgcc aatctcagta gtggtggcgt
      721 ggcaaatgta ttttctgctg cttttggttc tccgataacg gctaaagatt caccagaatt
      781 gcataaatta ctgacaaata tgattgagga tgccggagac ttggcaacgc gttcagcaaa
      841 agaatattat atgcgtattc gaccttttgc tttttatggt gtttctacgt gtaatacaaa
      901 agaacaggat acattatcca gaaatggctc ttatccatca ggtcatacat cgattggttg
      961 ggcaacagca cttgtattgt ccgaaataaa tccggcacgc caggatacca ttctgaaacg
     1021 gggttatgaa ctgggggaca gcagggttat ttgcggttat cactggcaaa gtgatgttga
     1081 cgcagcacgt attgttggct ctgctattgt agcaacactg cactcaaatc ctgtgttcca
     1141 ggcacaatta caaaaagcga aagatgaatt cgctaacaat cagaaaaaat aatgctttta
     1201 gccagtacgc cttataaccc cgaccttcag ggctaatgcc agtcagttaa gcaactgact
     1261 ggctcttttt cagggctgtg gggtatttcc agggcctctc ctttaccact ctcgggaagg
     1321 ccctttccct tcttgtcggt aatttcacta ggctgtgtcc ctcttaatg
//
LOCUS       DADMHC010000352         1364 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.355, whole genome shotgun sequence.
ACCESSION   DADMHC010000352 DADMHC010000000
VERSION     DADMHC010000352.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1364
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.355"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            598..882
                     /locus_tag="JNZ57_004121"
     CDS             598..882
                     /locus_tag="JNZ57_004121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858243.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HAY8830098.1"
                     /translation="MIYGGFMKSGVQLNLRARESQRILIDAAAEILHKSRTDFILEMA
                     CKAAEDVILDRRVFNFNDRQYEEFIEMLDAPVADDPAIEKLLARKPQWDV"
     gene            870..1355
                     /locus_tag="JNZ57_004122"
     CDS             870..1355
                     /locus_tag="JNZ57_004122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY8830099.1"
                     /translation="MGCVTAPEPLSSFHQVAEFVSGEAVLDDWLKQKGLKNQAIGATR
                     TFVVCRKGTQQIVGFYSLATGSVNHTEATGNLRRNMPDPIPVIILARLAVDVSFRGKG
                     LGADLLHDAVRRCYRVAENIGVRAIMVHALTENAKQFYIHHGFKPSKTQVQTLFLKLP
                     Q"
BASE COUNT          352 a          292 c          370 g          350 t
ORIGIN      
        1 cggcatccgg catataggca gcatgaacgc aacacaggct ctcgtacgga acgtgggaac
       61 ctgtcgtctc gatgctaagg gagcggcgcg gagcagaggc actgcaagcg cctgagtacc
      121 gatgcgagac acaggggcag atggcttcgt agtagtgagg aagtgcctgt aatgggcatg
      181 gagcgaaggg ggtcagtcga ggcgtttgag gttaccaatc gaagctatac ccggtaatgg
      241 cgtaggttga cctgcacttg gccaagtgga ttgcccgcaa acacaagcga gcgcgaggta
      301 gtctggtgcg tgcattcgag tggttactgc gaattcgtca cgactgcccg acgctgtttg
      361 cacactggtg cttagcttac gatacttgaa tggttcaacg acaagagccg tatgacgcga
      421 gagtgtcacg tacggttccg tgggagcgta ggggggcggt gcccctgcgc cacccgatat
      481 cccctttgag tgcggttacg tccacagagg taaatgccgc tgacgcggca tctgtaatct
      541 gttactttgt gtatatcatt tgctatatat tgtcaatatg ctattgttgt aaagcaaatg
      601 atatacggag gctttatgaa atcaggtgtt cagctcaatc tcagagcaag agaatcacag
      661 cggatactca ttgatgctgc tgcagaaatt cttcataagt cgcgtacaga tttcattctg
      721 gaaatggcct gtaaagctgc tgaagatgtt attctcgacc ggcgggtgtt taattttaat
      781 gacaggcaat atgaagagtt cattgaaatg cttgatgctc cggttgcaga tgatcctgcc
      841 atcgaaaaat tgctggcaag gaaacctcaa tgggatgtgt aactgcacca gaacctttat
      901 cctcatttca tcaggtcgct gaatttgtca gcggtgaagc tgtacttgat gactggttaa
      961 agcagaaggg gctaaaaaat caggcaatcg gagccacccg gacttttgtt gtatgcagaa
     1021 aaggtacgca acaaatagtc ggtttttact cactggccac tggtagtgtc aatcatacag
     1081 aagctacagg taaccttcgg cgcaatatgc cagaccccat tcctgtaatt atacttgcac
     1141 gcctggctgt agatgtgtca tttcgaggaa aagggcttgg cgcggattta cttcatgatg
     1201 cagttcgtcg ttgttacagg gttgccgaaa atatcggtgt gcgtgcaatt atggttcatg
     1261 cgcttacgga aaacgcaaaa cagttttata ttcatcatgg ttttaagcca tcaaaaactc
     1321 aggtgcaaac attgtttctt aaactccctc aatagggagt aatg
//
LOCUS       DADMHC010000353         1351 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.356, whole genome shotgun sequence.
ACCESSION   DADMHC010000353 DADMHC010000000
VERSION     DADMHC010000353.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1351
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.356"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            1..1144
                     /locus_tag="JNZ57_004123"
                     /pseudo
     CDS             1..1144
                     /locus_tag="JNZ57_004123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415291.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="anion permease"
BASE COUNT          297 a          315 c          345 g          394 t
ORIGIN      
        1 cgtttacctt aagcgccgca tttgtgacca ccggtttagg taaacgtatt gcctatctgc
       61 tgattggtaa aatcggtaac accacgctgg gtctgggtta cgttacggta ttcctcgatc
      121 tggtactggc tccggcaaca ccgtctaaca ccgcgcgtgc gggcggcatt gtgttaccga
      181 tcatcaacag cgtggcggtg gctttggggt ccgaaccgga aaaaagtccg cgtcgtgtcg
      241 gacattacct gatgatgtcc atttacatgg tcaccaaaac caccagctat atgttcttta
      301 ccgcaatggc ggggaacatt ctggcgctga aaatgatcaa cgatattctg cacctgcaaa
      361 ttagctgggg tggatgggcg ctggccgccg gattgccggg catcattatg ctgcccggca
      421 atccgctggt aatttacacc atgtatccac cagaaattaa aaaggtggat aacaaaacca
      481 tcgctaaagc gggccttgcc gaactgggac cgatgaaaat ccgcgaaaaa atgctgctcg
      541 gtgtctttgt gctggcgcta ctgggctgga ttttcagtaa gtctctgggg gttgatgaat
      601 ccactgtggc aatcgttgtt atggcgacca tgctgctgct gggtatcgtt acctgggaag
      661 acgtggttaa aaataaaggc ggctggaata ccttaatctg gtacggcggt attatcggat
      721 taagctcctt attatcgaaa gttaaattct tcgaatggtt agctgaagtc tttaaaaata
      781 acctggcatt tgatggtcac ggtaacgttg ctttcttcgt tattattttc ctcagcatta
      841 tcgtgcgtta tttcttcgct tccggtagtg cctatatcgt tgctatgtta ccggtatttg
      901 ccatgctggc gaacgtctcc ggcgcaccgt taatgttaac cgcgctggca ctgttgttct
      961 ccaactccta tggcggcatg gttactcact atggcggcgc ggcaggtccg gtcatctttg
     1021 gcgtgggtta taacgatatt aaatcctggt ggtcggtgcg gtactgacga tattaacctt
     1081 cctggtgcat atcaccctcg gcgtgtggtg gtggaatatg ctgatcggct ggaacatgct
     1141 gtaaatattc tcgtcatact tcaagttgca tgtgctgcgt ctgcgttcgc tcaccccagt
     1201 cacttactta tgtaagctcc tggggattca ctcgcttgtc gccttcctgc aactcaaatt
     1261 atttagagta tatccattta ttatctttct gcgcacttca cggtgcgcag atatctggag
     1321 catttgatga tcaagttatc tgaaaaaggg t
//
LOCUS       DADMHC010000354         1347 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.357, whole genome shotgun sequence.
ACCESSION   DADMHC010000354 DADMHC010000000
VERSION     DADMHC010000354.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.357"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(32..1321)
                     /locus_tag="JNZ57_004124"
     CDS             complement(32..1321)
                     /locus_tag="JNZ57_004124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005155249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8830100.1"
                     /translation="MHTRYLILLIIFIVTAVNYADRATLSIAGTEVAKELQLSAVSMG
                     YIFSAFGWAYLLMQIPGGWLLDKFGSKKVYTYSLFFWSLFTFLQGFVDMFPLAWAGIS
                     MFFMLGFSEAPSFPANARIVAAWFPTKERGTASAIFNSAQYFSLALFSPLLGWLTFAW
                     GWEHVFTVMGVIGFVLTALWIKLIHNPTDHPRMSAEELKFISENGAVVDMDHKKPGSA
                     AASGPKLHYIKQLLSNRMMLGVFFGQYFINTITWFFLTWFPIYLVQEKGMSILKVGLV
                     ASIPALCGFAGGVLGGVFSDYLIKRGLSLTLARKLPIVLGMLLASTIILCNYTNNTTL
                     VVMLMALAFFGKGFGALGWPVISDTAPKEIVGLCGGVFNVFGNVASIVTPLVIGYLVS
                     ELHSFNAALVFVGCSALMAMVCYLFVVGDIKRMELQK"
BASE COUNT          392 a          354 c          331 g          270 t
ORIGIN      
        1 aaacatcgtt attcatcgct tatacctttg cttatttctg caattccata cgtttaatgt
       61 cgccaactac gaagaggtag cagaccatcg ccatcagcgc tgaacatccc acgaaaacca
      121 gtgctgcatt gaaggagtgc agttcactta ccaggtagcc aatcaccagt ggagtgacaa
      181 tggaggcaac attgccaaag acgttaaaga cgccgccaca gaggccaaca atctctttcg
      241 gcgcggtgtc agaaatcacc ggccagccca gagcaccaaa tcctttgcca aaaaaagcca
      301 gcgccatcag catgaccacc agcgtggtgt tgttggtgta gttacataag atgatggtgg
      361 aagccagcaa cattcccagc acaatcggta gcttacgtgc cagggtcagg gataaaccgc
      421 gtttgatcag ataatccgag aagacacctc ccagcacgcc gcccgcaaaa ccacacagtg
      481 ccggaatcga ggcgaccaga cccactttca gaatcgacat gcctttttcc tgcaccagat
      541 aaatcgggaa ccaggtgagg aagaaccagg tgatggtgtt gataaaatat tgtccgaaaa
      601 atacgcccaa catcatgcgg ttagagagca attgcttgat gtaatgcagt ttgggaccgc
      661 ttgctgccgc gctgcccggc tttttgtggt ccatatcgac caccgcgcca ttttcagaga
      721 taaacttcag ctcttccgca gacatacgtg ggtgatctgt cgggttatga atcaacttga
      781 tccacagcgc cgtcagcaca aaaccaatca cccccataac ggtgaagacg tgctcccagc
      841 cccaggcgaa agtcagccag ccaagcagag gcgaaaagag cgccagcgag aaatattgcg
      901 ccgagttaaa gatggcggag gcagtaccac gttctttcgt cgggaaccag gcggcgacaa
      961 tacgggcgtt cgccgggaat gatggcgctt ccgagaagcc gagcataaag aacatagaga
     1021 tccctgccca ggccagcggg aacatatcaa caaagccttg caggaaggtg aatagcgacc
     1081 agaaaaagag gctgtaggtg taaacttttt tcgagccaaa cttatcaagc agccagccgc
     1141 cgggaatttg catcagcagg taggcccagc caaaagcgga gaagatgtaa cccatcgaaa
     1201 ccgcacttaa ctgcaactct tttgccactt cggtaccagc aatagacagc gttgcacgat
     1261 cggcgtagtt aacggcggta acaataaaaa taatcagtaa tattaaatag cgggtatgca
     1321 cgcctttctt ttttacgtca acggtgt
//
LOCUS       DADMHC010000355         1323 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.358, whole genome shotgun sequence.
ACCESSION   DADMHC010000355 DADMHC010000000
VERSION     DADMHC010000355.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1323)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1323)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.358"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            1..1323
                     /locus_tag="JNZ57_004125"
                     /pseudo
     CDS             1..1323
                     /locus_tag="JNZ57_004125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415260.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
BASE COUNT          345 a          306 c          343 g          329 t
ORIGIN      
        1 gccggcaagt tgattatcgg cccctggtat acccagaccg ataccacgat tgtttctgcg
       61 gaatccatcg tccgtaatct gatgtacgga atgcgtgact gcctcgcgtt tggcgagccg
      121 atgaaaatag gttatttacc agattccttt ggcatgtccg ggcaactgcc gcatatctac
      181 aatggatttg gcattacccg caccatgttc tggcgcggat gttcggagcg ccacggtact
      241 gataaaaccg agtttttgtg gcaaagcagt gacggtagcg aagtgacggc gcaggtgctg
      301 ccgctgggct acgccatcgg taagtactta cctgccgacg aaaacggatt acgtaaacgc
      361 ctcgacagtt attttgacgt gctggaaaaa gcgtctgtaa ccaaagagat tttgctgccg
      421 aatggtcatg accagatgcc attgcagcaa aatatcttcg aagtgatgga taagctacgt
      481 gagatctacc ctcaacgtaa gtttgtgatg agccgctttg aagaggtatt tgagaagatc
      541 gaagcgcagc gtgaaagtct ggccaccctg aaaggtgaat ttatcgatgg caaatatatg
      601 cgcgtacatc gcaccatcgg ttccacgcgc atggatatca aaattgccca cgcacgtatt
      661 gaaaataaga ttgttaatct gctggaaccg ctggcaacgc tggcctggac gttgggtttt
      721 gaataccacc acggcttgct ggagaaaatg tggaaagaga tcttaaaaaa tcatgcccac
      781 gacagtatcg gttgttgttg cagtgacaaa gttcatcgcg aaattgtcgc ccgcttcgaa
      841 ctggctgaag acatggcgga taatctgctg cgtttctaca tgcgcaaaat tgccgataac
      901 atgccacaga gtgatgccga caaactcgtg ctgtttaacc tgatgccctg gccgcgggaa
      961 gaagttatta acaccactgt gcggctgcgc gccagccagt ttaatctacg agacgatcgc
     1021 agcctgtacc gtattttatt cgtcatgccc gtgagatcga tccaggccta atcgatcggc
     1081 aaatagttca ttacggtaat tacgatccct ttatggagtt tgatatacag atcaaccaga
     1141 ttgtcccttc tatgggctat cgcacgcttt atatcgaagc gaatcagcct ggcaacgtga
     1201 ttgcggcaaa aagtgacgct gaagggatac tggaaaatgc tttctggcaa attgcgctca
     1261 atgaggatgg ttctctgcaa ctggtagata aagacagcgg tgtgcgctat gaccgagtat
     1321 tgc
//
LOCUS       DADMHC010000356         1317 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.359, whole genome shotgun sequence.
ACCESSION   DADMHC010000356 DADMHC010000000
VERSION     DADMHC010000356.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1317)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1317)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.359"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            59..1248
                     /locus_tag="JNZ57_004126"
                     /pseudo
     CDS             59..1248
                     /locus_tag="JNZ57_004126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001390675.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YccE family protein"
BASE COUNT          442 a          188 c          256 g          431 t
ORIGIN      
        1 catatacatg gaattagttg cactgcaaat aattatttga aaacaggcct ggaacgatat
       61 aaaaaatgag tacgaaaaaa atcaaacata ttcaatcacg ctttttgaaa acacactggt
      121 gtgttttatg cggttataca atgaactcag acgtaaagta aatgaagagg atactccatg
      181 tctggaatgt gaatcactag aaaaagaatt tgaggaaatg cagaatgata atgttctatc
      241 attatttatg agaacattgc gtactaatga tacacaaatt tattcagggt ttcaggaggt
      301 attacatata ctatacaata tgttcaaaat gttgatattg ttagagtgtc cttgccgggc
      361 agaggttcag agtctatcac agattttaaa ggttattatt ggtatggctt tatggaatat
      421 attgaaaaca ttactgcgtg tgatgatgtt ttttctgagt attgtttaga tgatgaaaat
      481 atgagtatcc agccagaaca gataaatacg ccgggaatat ctgatttaga tactggtatt
      541 gatttgtctg gcatatcttt tattcagagt gaaattaata aaacatatgg attaaaatac
      601 gctccagtag atggcgatgg atattgtctg ttaagagcca tactggtttt aaaagaacat
      661 gagtattcat gggcgctggg cggccataag acgcaaaagc aagtatacga agagtttatt
      721 aaaattgttg ataaacaaac gatcgaggct cttgttgata cgtcattcta taatctcagg
      781 gaagatgtaa agacgttatt tggcgttaat ctacaatctg acaacaaaat tcaggggcag
      841 ggtggttttt tatcatggag ttttttgtct tttaaaaaag aatttattga tagttgcttg
      901 aatgacaaaa aatgcatact gcatttaccc gaatttatat ttaatgataa caaggtacgc
      961 cttgttttag acaccgaccc agagcagagg gttaatgagg tgaaaaattt cctcactgct
     1021 ctttcagata gcattttctc attatttatt gttaatagta atatggcatc aatctccttg
     1081 gggaatgaat ccttttcaac agatgacgac cttgagtatg gttatttaat aaacactggc
     1141 aatcattatg atgtttacct ccctcctgaa ctttttgctc aggcttataa gttaaaaaat
     1201 aaggaaatga atgcgcaact cgactattta aatcgttatg caatttaatg gcaaaggcat
     1261 atgctaaaaa ccattgttat tagtctcaca cttttttatt ggtaaatatt gtctctg
//
LOCUS       DADMHC010000357         1305 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.360, whole genome shotgun sequence.
ACCESSION   DADMHC010000357 DADMHC010000000
VERSION     DADMHC010000357.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1305)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1305)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.360"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..>1305
                     /locus_tag="JNZ57_004127"
     CDS             <1..>1305
                     /locus_tag="JNZ57_004127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HAY8830101.1"
                     /translation="REVLHTQGEAGLKRVVKKEHADGSVTQSQFDAVGRLRTQTDAAG
                     RTTEYSPDVVTGLITRITTPDGRASAFYYNHHSQLTSATGPDGLEIRREYDEWGRLIQ
                     ETAPDGDIIRYRYDNPHSDLPCATEDATGSRKTMTWSRYGQLLSFTDCSGYVTRYDHD
                     RFGQMTAVHREEGLSQYRAYDSRGQLIAVKDTQGHETRYEYNAAGDLTAVIAPDGSRN
                     GTQYDAWGKAIRTTQGELTRSMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGFD
                     GRTQRYHHDLTGKLIRSEDEGLVTHWHYDEADRLTHRTVNGETAEQWQYDKRGWLTDI
                     SHLSEGHRVTVHYRYDEKGRLTGERQTVHHPQPEALLWQHETRHAYNAQGLANRCIPD
                     SLPAVEWLAYGSGYLAGMKLGDTPLVDFTRDRLHRETLRRFGR"
BASE COUNT          314 a          388 c          406 g          197 t
ORIGIN      
        1 ccgtgaagtg ctgcacacgc agggtgaagc cgggctgaag cgggtggtga aaaaggaaca
       61 cgcggacggc agcgtcacgc agagtcagtt tgacgccgtg ggcaggctca ggacacagac
      121 ggatgccgca ggccggacaa cagaatacag cccggatgtg gtgacgggcc tcatcacgcg
      181 catcaccacg ccggatggca gggcatcggc gttttactat aaccaccaca gccagttaac
      241 gtcagccacc gggcctgacg ggctggaaat acgccgggaa tatgatgaat ggggccgtct
      301 gattcaggaa actgcccctg acggcgatat catccgctac cgttatgata atccacacag
      361 tgacttaccc tgcgcaacgg aagatgccac cggtagccgg aaaaccatga cgtggagccg
      421 ttacggtcag ttgctgagct tcaccgactg ttccggttat gtaacccgtt atgaccatga
      481 ccgcttcggg cagatgacgg cggtgcaccg cgaggaaggg ctgagtcagt accgcgcata
      541 cgacagccgt ggacagttaa ttgccgtgaa agacacgcag ggccatgaaa cgcggtatga
      601 atacaacgcc gccggtgacc tgaccgccgt cattgccccg gacggcagca gaaacgggac
      661 acagtacgat gcgtggggaa aggccatccg taccacgcag ggcgagctga cgcgcagtat
      721 ggaatacgat gctgcaggac gggtcatccg cctgaccagt gaaaacggca gccacaccac
      781 cttccgttac gatgtactcg accggctgat acaggaaacc ggctttgacg gccgcacaca
      841 gcgttatcac cacgacctga ccggcaaact tatccgcagc gaggatgagg ggctggtcac
      901 ccactggcac tatgacgaag cagaccgcct cacgcaccgc accgtgaatg gcgaaaccgc
      961 agagcagtgg cagtatgaca aacgtggctg gctgacagac atcagccatc tcagcgaagg
     1021 gcaccgggtg acggtgcatt acaggtatga tgagaaaggc cggctgaccg gtgagcgcca
     1081 gacggtgcat cacccgcagc cggaagcact gctctggcag catgagacca gacacgctta
     1141 caacgcgcag ggactggcga accgctgtat accggacagc ctgcccgccg tggaatggct
     1201 ggcctacggc agcggttacc tggcaggcat gaagctcggc gacacaccgc tggtggattt
     1261 cacccgcgac cgcctgcacc gggaaacgct gcgccgcttc ggccg
//
LOCUS       DADMHC010000358         1283 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.361, whole genome shotgun sequence.
ACCESSION   DADMHC010000358 DADMHC010000000
VERSION     DADMHC010000358.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1283)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1283)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1283
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.361"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..479)
                     /gene="ospG"
                     /locus_tag="JNZ57_004128"
     CDS             complement(<1..479)
                     /gene="ospG"
                     /locus_tag="JNZ57_004128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector protein
                     kinase OspG"
                     /protein_id="HAY8830102.1"
                     /translation="MKITSTIIQTPFPFENNNSHAGIVTEPILGKLIGQGSTAEIFED
                     VNDSSALYKKYDLIGNQYNEILETAWQESELFNAFYGDEASVVIQYGGDVYLRMLRVP
                     RTPLSDIDTADIPDNIESLYLQLICKLNELSIIHYDLNTGNMLYDKESESLFPIDFR"
     gene            complement(622..734)
                     /locus_tag="JNZ57_004129"
                     /pseudo
     CDS             complement(622..734)
                     /locus_tag="JNZ57_004129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000970002.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     gene            complement(731..1000)
                     /locus_tag="JNZ57_004130"
     CDS             complement(731..1000)
                     /locus_tag="JNZ57_004130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830103.1"
                     /translation="MAQVNMSVRIDAELKDAFMAAAKSMDRNGSQLIRDFMRQTVERQ
                     HNSWFRDQVAAGRQQLECGDVLPHDMVESSAAAWRDEMSRKIADK"
BASE COUNT          340 a          319 c          265 g          359 t
ORIGIN      
        1 ttgcgaaaat ctattgggaa taaactttca ctttctttat catacagcat attacctgta
       61 ttaagatcgt aatggattat actcaactca ttcaatttac atatcaactg tagataaagg
      121 ctctctatat tatcagggat atcagctgta tcaatgtcac taaggggagt cctaggcacg
      181 cgcagcattc ggaggtacac atctccgcca tactgtataa caacggatgc ttcatcgcca
      241 taaaaagcat taaaaagctc agattcttgc caagccgttt ccagaatctc attgtactgg
      301 ttgccaataa gatcatactt tttatacaaa gcagatgaat cattcacatc ttcaaagatt
      361 tctgctgtcg acccctgacc tattaactta ccgagaatgg gctccgttac tatgccagca
      421 tgagaattat tattctcaaa tggaaaaggt gtttgaataa tggtagatgt tattttcatg
      481 tcataccttt gttacgatat ttaaaaatca caagagattt tcacacaaaa taacgttaca
      541 cgctaccttg tgtggtccag atgttccttc cacacgaccg ttgcggcctt tatacggctg
      601 ccctgccagg ctgctggctg aataaccaat ccgttcgtcc ggttcaatgg cggccatcag
      661 gttctgctcc gcaatgtact acgaatgcgc ttcctgtcct ggatggccag catggtccag
      721 aacatctcca tcatttatca gcaatcttcc tgctcatttc atcccgccat gcagcagcag
      781 aggattcgac catgtcatgg ggaagcacat caccgcattc gagttgctga cggcctgccg
      841 caacctggtc acggaaccaa gaattgtgct gccgttcaac ggtctggcgc ataaaatccc
      901 ggattaactg agagccatta cggtccatgc tttttgcagc ggccataaaa gcatccttca
      961 gttctgcgtc gattcttaca ctcatattaa cctgtgccat ttgccacctc gtcattacca
     1021 cgtatataca cagtatataa ctgttcagat atcgtcacca ggatatgccg cgccagcggc
     1081 atgtaaggcg gcactccgtt gttgcatatg gcagaggagt aaaaccgccg aagcccggcg
     1141 taagccggta cgtattgaca ggtttcacct gtcctatcac tggcgctgac agttttatgc
     1201 gatgtgatta tgaatggtgc agttgtgagc cgttttcaga caatcgcagg gccagtacct
     1261 cgtcagtcag ctgacggtaa atc
//
LOCUS       DADMHC010000359         1271 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.362, whole genome shotgun sequence.
ACCESSION   DADMHC010000359 DADMHC010000000
VERSION     DADMHC010000359.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1271)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1271)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1271
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.362"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..569
                     /locus_tag="JNZ57_004131"
     CDS             <1..569
                     /locus_tag="JNZ57_004131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3313 domain-containing protein"
                     /protein_id="HAY8830104.1"
                     /translation="LNNYSDLKETTSATGKPVLRWVDPSFDQSKYDSIVWNPITYYPV
                     PKPSTQVGQKVLDKILNYTNTEMKEAIAQRKPLVTTAGPRSLIFRGAITGVDTSKEGL
                     QFYEVVPVALVVAGTQMATGHRTMDTRLYFEGELIDAATNKPVIKVVRQGEGKDLNNE
                     STPMAFENIKQVIDDMATDATMFDVNKK"
     gene            complement(587..1088)
                     /gene="tnpA"
                     /locus_tag="JNZ57_004132"
                     /pseudo
     CDS             complement(587..1088)
                     /gene="tnpA"
                     /locus_tag="JNZ57_004132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000604919.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
     gene            1096..1164
                     /locus_tag="JNZ57_004133"
                     /pseudo
     CDS             1096..1164
                     /locus_tag="JNZ57_004133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015869975.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="virulence protein"
BASE COUNT          360 a          283 c          297 g          331 t
ORIGIN      
        1 ttttaaacaa ttactctgat ttaaaagaaa caacctcagc aacaggtaaa cctgttttac
       61 gttgggtaga cccgagtttt gatcaaagca aatatgacag catcgtctgg aacccaatca
      121 cttattatcc ggtgccaaaa ccttctaccc aggtagggca gaaagttctg gataaaattt
      181 tgaactatac caacaccgaa atgaaagaag cgatagcgca gcgtaaacca ctggttacca
      241 ccgctgggcc gcgtagtctg attttccgtg gggccattac cggtgtagat accagcaaag
      301 aagggctgca attctatgaa gtggttcctg ttgcattagt ggttgcgggg acgcaaatgg
      361 ctacaggtca ccgtaccatg gatactcgcc tctattttga aggtgagctg attgatgcag
      421 cgactaataa accggttatc aaagtcgttc gtcagggcga aggtaaagac ctgaataacg
      481 aaagtacgcc aatggctttc gaaaatatta aacaagttat tgatgacatg gcgaccgatg
      541 ccaccatgtt tgacgttaac aaaaagtagt tccagacgcg ccatcgttag atggcgcttt
      601 ttatccggtg cgccgtaaaa ccccatcctt cagggcgggg atataaggcg cggttttcca
      661 cctgaccagg tgtttgctgt tgttcaatgt attggcggat gacggatatt ggcgcacctc
      721 cgcagctact ggcaaaatag ccaggactcc acaaaacgcc tttgtagtaa tacctgactg
      781 caatatctgg tcgatctcgt cgcagtaacc tacccgatac gcctttgagg ctgtttacca
      841 gactggatat cgccagtttg ggaggttagt taattaacaa atggacgtga tctggttcgc
      901 catccatttc aaccagttca gcttcaaaat aagcacatac atttgaaaag taagtgcgta
      961 gtttttctgt cgcgtcaaaa aatctggcgt cggtatctgg tgacaaagac caggtgaaca
     1021 tgcatcagga aaacacaatg ccttccacgc cggatatcgg tttctttttt cacaaaccaa
     1081 agtatcattt gacctgtgaa acgattacag gcatttaaat tccagttaag accaggtggt
     1141 caacaggagt gtgaaatgag gcgtgaaccg ccccaagttt cctggagaat gttttatctg
     1201 tgaactcagg ctgccagatc atcgtttccg atagaagcat aataagcttt ttctgcttct
     1261 gccggaggga t
//
LOCUS       DADMHC010000360         1266 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.363, whole genome shotgun sequence.
ACCESSION   DADMHC010000360 DADMHC010000000
VERSION     DADMHC010000360.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1266)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1266)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.363"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..1179)
                     /locus_tag="JNZ57_004134"
     CDS             complement(<1..1179)
                     /locus_tag="JNZ57_004134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000232707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8830105.1"
                     /translation="MVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINR
                     FGQKRAFIIGMGLCTIGVAAVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELRGS
                     TSKKTGTSVNLWQMAWYVSTTVVYLVLLPLLLSGIAEEQLWRYGIFIGAIFAVIFMIL
                     RYFFIGESAMWAARVGRYQEACDILGKRYGVQARVAASGTTEAKFSEKAENKYSGGYG
                     ILFNDRYRKRTILGCVVATMQAWQYNAVGVYLPLTLAGIISGGLTGALTGSAVVNALC
                     GVTGGMIGSFILQRLGTRRQSMYGFAVVTLALLSLGALATTNPWLSLGLLGSIIFFHS
                     AGPGGLGMTIATLSYLPAIRPTGVRFARAIMRTGAIAGLIFWPMLWGALKTEAFYWLA
                     I"
BASE COUNT          375 a          353 c          280 g          258 t
ORIGIN      
        1 gattgccaac cagtaaaacg cttcagtttt caacgcaccc cacagcatcg gccagaaaat
       61 gagtcctgca attgcccctg tgcgcataat agcgcgggca aatctgaccc cagtagggcg
      121 aatagcggga agataagaga gtgtggcaat ggtcatgccc agcccaccag gacccgctga
      181 atggaagaaa ataattgatc ctaataaccc taaagacagc cagggattag tcgttgccag
      241 tgcgcctaac gacagcaatg ctaaggtcac aacagcaaat ccatacatcg actgtcggcg
      301 agtacccagt cgttggagaa taaacgagcc gatcatcccg cctgtcaccc cacaaagggc
      361 attcacgacg gcagaaccgg tcaacgcgcc agtaagcccg ccacttatta ttcccgccaa
      421 cgtaagagga agataaacac ctacggcgtt atattgccac gcctgcatgg ttgccacgac
      481 acagccaaga atggtgcgtt tgcggtaacg atcattaaat aagatgccat atccaccact
      541 gtatttattc tctgcttttt ccgagaattt cgcttctgtt gtacccgatg ccgcaacgcg
      601 agcctgaaca ccataacgtt ttcccagaat gtcgcacgct tcctggtaac gcccgacgcg
      661 tgcggcccac attgcggatt caccaataaa gaagtaacgc aaaatcatga agatgactgc
      721 aaaaatagct ccgatgaata ttccgtaacg ccacaattgt tcttcagcga tacccgacag
      781 aagcagcggc aaaagtacca aataaacaac ggttgtcgaa acataccagg ccatttgcca
      841 gaggttgacc gacgttccgg ttttcttcga cgttgaacca cgaagctctg ccacggcatt
      901 ggttgccaaa gggaagtcga tgcctaaacc aaagcccatg atgacgcggc acaccagcac
      961 ccaccagata ctgggagcaa tagctaccgc tgcaacaccg atggtgcaca gccccatgcc
     1021 aataataaat gcccgctttt gcccaaagcg gtttattact cggttcgcta ataaaccgcc
     1081 aattaacgca gcgattaata ctgatgcatt gacggttgca gcaagacccg gcgaaatgcc
     1141 gaattgagcg gcaatgtatt tattaccaaa ccccaccatc gccgcctagt aggcatcaat
     1201 caatatgccg cccaaagcaa taaaaataac gccgatactg gtgttgattg cagagttctt
     1261 attaac
//
LOCUS       DADMHC010000361         1242 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.364, whole genome shotgun sequence.
ACCESSION   DADMHC010000361 DADMHC010000000
VERSION     DADMHC010000361.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1242)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1242)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.364"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            220..1167
                     /locus_tag="JNZ57_004135"
     CDS             220..1167
                     /locus_tag="JNZ57_004135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001361319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HAY8830106.1"
                     /translation="MKNVLVTVPSFSARCVSASKLLRENNFNLIIKNNVEHLLKSEST
                     ALRESICAVIAGKDCYQADTLSLLPGVKIISRFRTGIDNIDLRAAQQSGIVVNNAVGI
                     NSNAVAEFIIGLIFASMRNIPGSYHAMQNGYWGESHGYELQGKRIGMVGYGNIGKTLA
                     KRLSGFDVELLAYDKQPDYQVADKVGVQFVSIEDIFMQSHVIIVLLPFSPELENFISH
                     KYLSMMRNGALIINAARGKLLDEGALLQVIEERNVFAALDVFSSEPLAQFSPLLHAKN
                     IITTPHIAAATVESYQQTGTHVAQSIIDYFAGREIKNVL"
BASE COUNT          342 a          241 c          295 g          364 t
ORIGIN      
        1 aggtttagca ccgtcatgct cgtctactgt tgttctggtt gttggtgatg cggtggcgct
       61 tgcactctct gaattgaaaa aatttactcg tgctgatttc ggcttatatc atccaggagg
      121 tgcactcggc attaaagcaa attcataatt tcaaagtata aatacagtaa ccggtcacgc
      181 catcttttgg ggtggcgttc attgaagtga gtgtcagcta tgaaaaatgt tctggtcacc
      241 gtccccagct tttcagcacg ctgtgtttcc gccagcaagt tgctaagaga gaataatttt
      301 aatcttatta ttaagaataa tgtggagcat ctgcttaaat cagaatccac tgcattacga
      361 gaatctattt gcgcggtcat cgccggaaaa gattgttatc aggcggacac gctatcattg
      421 ctgcctggtg tgaaaataat atcgagattc aggacgggga tagataatat tgatcttcgt
      481 gcagcacaac aatccggtat tgtagtcaat aatgcggttg ggattaattc aaatgctgtc
      541 gcggaattta tcattggact tatcttcgcg agcatgagaa atattcccgg cagctatcat
      601 gcgatgcaaa atggctactg gggtgagtcg catggctatg aattacaagg caaacggatt
      661 ggcatggttg gctacggcaa tataggtaaa accctggcaa aaaggttatc cggttttgat
      721 gttgagcttt tagcttatga caaacaaccc gattatcagg ttgctgacaa agttggagtt
      781 cagtttgtat caattgaaga tatctttatg cagtcgcatg tcatcattgt tcttttgcct
      841 ttttctcctg agctggagaa cttcattagt cataaatatt tgtcgatgat gcgcaatggt
      901 gctctaatca tcaatgccgc aaggggaaag ttgctggatg agggcgcttt actacaggtg
      961 attgaagaac gaaatgtgtt tgcggcgctg gatgtgttta gctctgaacc gttggcgcaa
     1021 tttagcccac tgctacatgc caaaaatatc attacaacgc cgcatattgc ggccgccacc
     1081 gttgagtcat accagcaaac cggtacacac gttgcccagt cgataattga ttacttcgca
     1141 ggaagggaga taaaaaacgt gttgtgagtt cagcgaacga agtttttaaa tacaaaaaaa
     1201 ccgcaatttg tggaacacat tgcggtttat cagcattcta ag
//
LOCUS       DADMHC010000362         1241 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.365, whole genome shotgun sequence.
ACCESSION   DADMHC010000362 DADMHC010000000
VERSION     DADMHC010000362.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1241)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1241)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1241
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.365"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..1069)
                     /gene="ugd"
                     /locus_tag="JNZ57_004136"
     CDS             complement(<1..1069)
                     /gene="ugd"
                     /locus_tag="JNZ57_004136"
                     /EC_number="1.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 6-dehydrogenase"
                     /protein_id="HAY8830107.1"
                     /translation="MKITISGTGYVGLSNGLLIAQNHEVVALDILPSRVAMLNDRISP
                     IVDKEIQQFLQSDKIHFNATLDTNEAYQDADYVIIATPTDYDPKTNYFNTSSVESVIK
                     DVVEINPYAVMVIKSTVPVGFTAAMHKKYRTENIIFSPEFLREGKALYDNLHPSRIVI
                     GERSERAERFAALLQEGAIKQNIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYA
                     ESLGLNTRQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAI
                     VDANRTRKDFIADAILSRKPQVVGIYRLIMKSGSDNFRASSIQGIMKRIKAKGVEVII
                     YEPVMKEDTFFNSRLERDLATF"
BASE COUNT          367 a          251 c          258 g          365 t
ORIGIN      
        1 tgaaggtggc gagatcgcgt tccagacgag agttgaagaa tgtgtcttct ttcatcaccg
       61 gctcgtagat gattacttca acacctttcg ccttgatacg tttcataatt ccctgaatgg
      121 aagacgcacg gaagttatct gaaccgctct tcataatcag acgataaata cccaccactt
      181 gcggtttgcg tgacaaaatg gcatcggcaa taaaatcttt acgcgtgcgg tttgcatcga
      241 caattgccga gatcaggtta ttcggcacag actggtagtt cgccagtaac tgcttggtat
      301 ctttcggcaa acaatagcca ccataaccaa acgacggatt gttgtaatgg ttgccaatac
      361 gcggatcgag acaaacacct tcgataatct gacgagtatt cagacctaaa ctttctgcat
      421 agctatccag ttcattaaag tatgctacgc gcatcgccag ataggtatta gcaaacagtt
      481 taatcgcttc tgcttcggtt gaatcggtga acagggtcgg gatattttgc ttaatcgcgc
      541 cttcctgtaa taacgccgca aaacgttctg cgcgttccga acgctcacca atgacaatac
      601 gtgacggatg aaggttatcg taaagagctt taccttcacg gaggaattcg ggggagaaaa
      661 taatattttc agtacgatat ttcttatgca tcgctgcggt aaaaccaacg ggaaccgtgg
      721 atttgatgac cataaccgca taaggattta tctctactac gtctttaatt actgattcta
      781 cactggatgt attaaaataa ttagttttag gatcatagtc ggttggagtg gcgatgatga
      841 cataatcagc atcctggtag gcttcatttg tatctaatgt ggcattaaag tgtattttat
      901 ctgattgcaa aaactgctga atttccttat caacaatagg agatatccga tcattcagca
      961 tagcaacgcg tgacggtaaa atatctaatg ccacaacctc atgattttgt gcgattagaa
     1021 gcccgtttga caagcctaca tagccagtac cggaaatggt gattttcatt tcatgctctc
     1081 agaattaact taactgtgaa tcatgatgtt tttagcatcc tgataagagt taaaagtttt
     1141 aacgctacgt cgatagctgg tcaacgcaac gaaaaacaat tcagattttc tttataagaa
     1201 tagctgatat ttattaagtt aatattaagc agtgaaattt a
//
LOCUS       DADMHC010000363         1238 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.366, whole genome shotgun sequence.
ACCESSION   DADMHC010000363 DADMHC010000000
VERSION     DADMHC010000363.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1238)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1238)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.366"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(269..1237)
                     /gene="astE"
                     /locus_tag="JNZ57_004137"
     CDS             complement(269..1237)
                     /gene="astE"
                     /locus_tag="JNZ57_004137"
                     /EC_number="3.5.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate desuccinylase"
                     /protein_id="HAY8830108.1"
                     /translation="MDNFLALTLTGKKPVITEREINGVRWRWLGDGVLELTPLTPPQG
                     ALVISAGIHGNETAPVEMLDALLGAISHGEIPLRWRLLVILGNPPALKQGKRYCHSDM
                     NRMFGGRWQLFAESGETCRARELEQCLEDFYDQGKESVRWHLDLHTAIRGSLHPQFGV
                     LPQRDIPWDEKFLTWLGAAGLEALVFHQEPGGTFTHFSARHFGALACTLELGKALPFG
                     QNDLRQFAVTASAIAALLSGESVGIVRTPPLRYRVVSQITRHSPSFEMHMASDTLNFM
                     PFEKGTLLAQDGEERFTVTHDVEYVLFPNPLVALGLRAGLMLEKIS"
BASE COUNT          350 a          323 c          283 g          282 t
ORIGIN      
        1 gagattaact ttactgactt tagcgtcaat taatcagagc aacggtaaaa caatgaaagt
       61 gtaaaaaaca cttttgcgcc aattatggag aaaaaaagaa aatttgatgg agagtgatga
      121 gagaatatta caacacaatg attttgcaga gattatgaag aactataccg gatgactggt
      181 gataaataaa gcaaataacc aggattaatc tgtattaatt tataagaaag caacttaata
      241 cccgcagaat gatttctgcg ggtaagtatt agcttatttt ttcgagcatt aatcccgcgc
      301 gtaatcccaa cgctaccaac ggattaggga ataacacata ctctacatca tgggttacgg
      361 taaaacgttc ctctccgtcc tgcgccagca atgttccttt ctcaaacggc ataaaattca
      421 gcgtgtcact tgccatatgc atttcgaagg acggcgagtg gcgagtaatt tgcgaaacca
      481 cccgataacg gagcggcggt gttctcacga taccgacact ctcaccagat agcagcgcag
      541 caattgcgct ggcagttact gcaaactggc gaagatcgtt ttgcccaaag ggcaacgctt
      601 tgccaagttc cagcgtacag gccagcgcgc caaaatgtct ggcgctgaaa tgggtaaacg
      661 taccaccagg ttcctgatgg aacaccagcg cctccagccc cgccgcaccc agccacgtca
      721 gaaatttctc gtcccaggga atgtcgcgtt gcggtaatac accgaactgc ggatgcaagg
      781 agccacgaat tgcggtatgt agatcaaggt gccagcgcac agattctttg ccctggtcat
      841 aaaaatcttc caggcactgt tccagttcgc gcgcccgaca ggtttctccg ctttcagcaa
      901 atagctgcca acgaccgcca aacattcgat tcatatcgct atggcaataa cgtttccctt
      961 gcttcagcgc aggaggattc ccgaggatca ccagcaaccg ccaacgtaac gggatctcgc
     1021 cgtgagatat cgcgccaagc aacgcgtcca gcatttccac aggtgccgtc tcattaccgt
     1081 ggatccccgc agaaatcacc agcgcgcctt gcggtggcgt taatggcgtc agttccagca
     1141 caccatcgcc cagccagcgc cagcgaacgc cgttgatttc tcgctcggtg ataaccggtt
     1201 ttttacccgt taaggtcaga gcaagaaaat tatccatt
//
LOCUS       DADMHC010000364         1232 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.367, whole genome shotgun sequence.
ACCESSION   DADMHC010000364 DADMHC010000000
VERSION     DADMHC010000364.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1232)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1232)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.367"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..752)
                     /gene="ipaH3"
                     /locus_tag="JNZ57_004138"
     CDS             complement(<1..752)
                     /gene="ipaH3"
                     /locus_tag="JNZ57_004138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase IpaH3"
                     /protein_id="HAY8830109.1"
                     /translation="MSIMLPINNNFSLSQNSFYNTISGTYADYFSAWDKWEKQALPGE
                     NRNEAVSLLKECLINQFSELQLNRLNLSSLPDNLPPQITVLEITQNALISLPELPASL
                     EYLDACDNHLSTLPELPASLKHLDVDNNQLTMLPELPALLEYINADNNQLTMLPELPT
                     SLEVLSVRNNQLTFLPELPESLEALDVSTNLLESLPAVPVRNHHSEETEIFFRCRENR
                     ITHIPENILSLDPTCTIILEDNPLSSRIRESLS"
BASE COUNT          365 a          205 c          293 g          369 t
ORIGIN      
        1 gacagagact ccctgatccg tgaggacaga ggattgtctt cgaggatgat agtgcaggtc
       61 ggatcaaggc taagtatatt ttccggaatg tgtgtgatgc gattctcgcg gcaccggaaa
      121 aatatctcgg tttcctctga gtgatgattt cttacaggta cggctggtag gctttccaga
      181 agattagtac ttacatcgag cgcttccagt gattcaggta actcaggaag aaatgtcagc
      241 tggttatttc ttactgagag cacttccagc gatgtaggta attcaggaag catggttagc
      301 tgattgttat ctgcattaat atattccagc aatgcaggca attcaggaag catggttagt
      361 tggttgttat ctacatcaag atgtttcaga gatgcgggta attcaggaag tgttgacagg
      421 tgattgtcac aggcgtcaag gtattccagc gatgctggca attctggtaa tgatattagg
      481 gcattctgag taatttccag aacagtgatt tgaggtggta agttgtcagg tagcgaggac
      541 agatttaaac gattcagttg aagctcactg aactgattga tgagacattc tttaagtagg
      601 gagaccgctt cattccgatt ttcaccgggg agcgcttgtt tttcccattt atcccatgct
      661 gaaaagtaat cagcatatgt accggaaata gtgttataaa aagaattttg ggacaatgaa
      721 aagttattat ttatcggtaa catgatggac attcagttaa agccgatgga caaatggctt
      781 tgttaaaaga aataagtagg agtttttatg aagttcattc catgaaatga acttcagcac
      841 ttttttatta taaaaggaca aacaaaattg gctgtaaaaa aacgatactg tttcagttaa
      901 ctgtgaatag cttgcttgca ccgtattgtt cttgtttttc ggttagttaa acatcgtact
      961 tcatatttga acgttctgcc ggaatgcatt atcaatagag gtaaagtcgc aaccccaaat
     1021 cgtaaaggaa accgtagcac gtcgtatgca agaacgtgcc acggctggct gatggatgtt
     1081 cgatagcgcg agtttgaatg aaaatcagcc ggagatgatt ttacataatt gctacggaat
     1141 tattcaatac aggaattgct tgcgtctgca tggattgacc tgaaattttc ccgaaaattt
     1201 ctctaaaaaa ctcgaaaaaa atggtaactg gt
//
LOCUS       DADMHC010000365         1230 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.368, whole genome shotgun sequence.
ACCESSION   DADMHC010000365 DADMHC010000000
VERSION     DADMHC010000365.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1230)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1230)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.368"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            312..>1230
                     /gene="kgtP"
                     /locus_tag="JNZ57_004139"
     CDS             312..>1230
                     /gene="kgtP"
                     /locus_tag="JNZ57_004139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate permease"
                     /protein_id="HAY8830110.1"
                     /translation="MAESTVTADSKLTSSDTRRRIWAIVGASSGNLVEWFDFYVYSFC
                     SLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLLSVCM
                     MCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGF
                     YASFQYVTLIGGQLLALLVVVVLQHTMEDAALREWGWRIPFALGAVLAVVALWLRRQL
                     DETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGM
                     HANVASGIMTAALFVFMLIQPLIGALSDKI"
BASE COUNT          298 a          286 c          296 g          350 t
ORIGIN      
        1 aaaggccatc cgtcaggatg gcctttttgc attggcgcag aaaaaatgcc tgatgcgacg
       61 ctgcgcgtct tatactccca catatgccag attcagcaac ggatgcggtt tccccaactt
      121 gcctacttcc atacgtgtcc tccttaccag aaatttatcc ttaagctcct caataaccat
      181 tttcctgcta actaaattca tggttaatgt tgcataataa tacgcaacaa atgtataaca
      241 ttttctttac caaaagaaat aaacaaaagc gaccaacaaa agcatcggat tacggcagga
      301 gacataatgg catggctgaa agtactgtaa cggcagacag caaactgaca agtagtgata
      361 ctcgtcgccg catttgggcg attgtggggg cctcttcagg taatctggtc gagtggttcg
      421 atttctatgt ctactcgttc tgttcactct acttcgccca cattttcttc ccttccggga
      481 acacgacgac tcaactacta caaacagcag gtgtttttgc tgcgggattc ctgatgcgcc
      541 caataggcgg ttggctattt ggccgcatag ccgataaaca tggtcgcaaa aaatcgatgc
      601 tgttatcggt gtgtatgatg tgtttcggat cgctggttat cgcctgcctc ccaggttatg
      661 aaactatagg tacgtgggct ccggcattat tgcttctcgc gcgtttattt cagggattat
      721 ccgttggcgg agaatatggc accagcgcca cctatatgag tgaagttgcc gttgaagggc
      781 gcaaaggttt ttacgcatca tttcagtatg tgacgttgat cggcggacaa ctgctagccc
      841 tactggttgt cgtggtttta caacacacca tggaagacgc tgcactcaga gagtggggat
      901 ggcgtattcc tttcgcgtta ggagctgtgt tagctgttgt ggcgttgtgg ttacgtcgtc
      961 aattagatga aacttcgcaa caagaaacgc gcgctttaaa agaagctgga tctctgaaag
     1021 gattatggcg caatcgccgt gcattcatca tggttctcgg ttttaccgct gcgggctccc
     1081 tttgtttcta taccttcacc acttatatgc agaagtatct ggtaaatact gcggggatgc
     1141 atgccaacgt ggcgagtggc attatgactg ccgcattgtt tgtattcatg cttattcaac
     1201 cactcattgg cgcgctgtcg gataagattg
//
LOCUS       DADMHC010000366         1225 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.369, whole genome shotgun sequence.
ACCESSION   DADMHC010000366 DADMHC010000000
VERSION     DADMHC010000366.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1225)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1225)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.369"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            203..397
                     /locus_tag="JNZ57_004140"
     CDS             203..397
                     /locus_tag="JNZ57_004140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830111.1"
                     /translation="MIGHITNSGGNNSLMKHDVVQGNNIVDLDLLRNFNGVTGLNRDN
                     FIYISDIFLNIKQRNEKIMQ"
     gene            400..>1225
                     /locus_tag="JNZ57_004141"
     CDS             400..>1225
                     /locus_tag="JNZ57_004141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005136105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SopA family protein"
                     /protein_id="HAY8830112.1"
                     /translation="MLREVSISNDTISVKFYRNEKIECACNLLMDKDAQGYIDLSDFD
                     VTNCHFKGDVISKVSFLSSNLQHVTFECKEIENCNFTKATVDNVIFKCRRLHNVIFLK
                     TSGECVDFSQNILDTVDFSQSQLGHSNFRECQIRNSNFDNCYLYASHFTRAEFLSAKE
                     ISFIKSNLTAVMFDHVRMSTGNVKDCITEQLELTIDYSDIFGNEDLDGYINNIIKMID
                     TLPDNAMILKSVLPVKLVMQLKILNIVNKNFIENMKKTFSHCPYIKDPIIRSYIHSG"
BASE COUNT          414 a          182 c          206 g          423 t
ORIGIN      
        1 cacgcaagca ccttaaaatc accatcatac actaaatcag taagttggca acattaccat
       61 tttttatagt acttcacttc ttcttcacta agaatgtcca ttatctcaat gccttatcag
      121 agattctttt cctttcgccg gtagtgtctg gacgctcagg ctacttttcc aggttatttt
      181 atttctgtat tacagaggtt ttatgatagg tcatatcaca aattctggtg gcaataactc
      241 tttgatgaaa catgatgtgg ttcaaggaaa taatatagta gatcttgatt tactacgtaa
      301 tttcaatggg gtgacaggtt taaacagaga taactttatt tatatcagtg atatattttt
      361 aaatataaaa caacggaacg aaaaaatcat gcaataaata tgttacgtga agtctcaatt
      421 agtaatgata ctataagtgt aaaattctac agaaatgaaa aaatagaatg cgcttgtaat
      481 cttctgatgg ataaagatgc gcaggggtat atcgacctgt ctgattttga tgtaacaaat
      541 tgtcatttta aaggtgacgt tatttctaag gtgtcttttt tatcatcaaa tctacaacat
      601 gtaactttcg aatgtaaaga aattgagaat tgcaatttta ctaaggcaac agttgataat
      661 gttatattta aatgtcgacg tttacacaat gtgatttttc tcaaaacgag tggcgaatgt
      721 gttgatttta gccaaaatat tcttgataca gttgacttct cgcagagtca acttggtcat
      781 agtaattttc gcgaatgtca gattagaaat tcaaacttcg ataattgtta tctttacgct
      841 tcgcacttca ccagagcaga gtttctgtct gccaaagaaa tatcatttat taaatcgaat
      901 ttgacagctg ttatgtttga tcatgtgcga atgtcgacag ggaatgttaa agattgcatt
      961 acagaacaat tggaattaac tattgattat tcagatatat ttgggaatga agatctcgat
     1021 ggttatatca ataacattat aaaaatgatt gatacattgc cagataatgc aatgatattg
     1081 aaatccgttc tgccagtaaa actggttatg caattaaaaa ttcttaatat tgttaataaa
     1141 aactttattg agaatatgaa gaaaacattt agccattgtc cttatataaa agatccaatt
     1201 atacgcagtt atatccattc tggtg
//
LOCUS       DADMHC010000367         1208 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.370, whole genome shotgun sequence.
ACCESSION   DADMHC010000367 DADMHC010000000
VERSION     DADMHC010000367.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1208)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1208)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1208
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.370"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(48..1190)
                     /locus_tag="JNZ57_004142"
     CDS             complement(48..1190)
                     /locus_tag="JNZ57_004142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000017332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HAY8830113.1"
                     /translation="MSGWFDLTLNQRVYNQDGKTANAVVTYDGNVGEQYNDAWFGDSA
                     NENIMQFSDIYLTTRGFLPFAPEADFWVGKHKLPQYEIQMLDWKTLTTDVAAGVGIEN
                     WALGVGLFDMSLSRDDVDVYSRDFSRTSQMNTNSVDVRYRNIPLWDDATLSLMAKYSA
                     PNKTDQQQDNENDNSYFEMKDSWMLTSVLRQNLQRDTFNEFTLQVDNNSYASSFASFS
                     DASNTMAHGRYYYGDHTNGIAWRLISQGEMYLTDNIIMANALVYSHGEDVYSYESGAH
                     SDFDSIRTVIRPAWIWNTWNQTGLELGWFKQQNKTQQGVTLNESAYKTTLWHALKVGE
                     SILGSRPEIRFYGTYINILDNELSNFKFNENSKDEFMAGIQAEVWW"
BASE COUNT          345 a          295 c          220 g          348 t
ORIGIN      
        1 aaaccttttt taaatcctga catacacaac tccttaacta aaatagatta ccaccagact
       61 tccgcctgga tgccggccat aaactcgtct ttgctgttct cattaaactt aaaattcgat
      121 aattcgttat ccagaatatt gatatacgtt ccatagaagc gaatttctgg tcgtgaacct
      181 aaaatgcttt cacccacttt caatgcatgc cagagtgtcg ttttataagc cgattcattt
      241 agtgttacac cctgctgagt tttgttctgt tgcttaaacc agcctaattc aagccccgtc
      301 tgattccatg tattccagat ccaggccggt cttattacag tgcgaatact gtcaaaatca
      361 ctatgagcac cactttcata actataaaca tcttcgccgt gagaatagac aagcgcgtta
      421 gccataataa tattgtcagt aagatacatc tcgccctgag agattaaacg ccaggcgatc
      481 ccattggtat gatcaccata gtaatagcga ccatgcgcca tcgtattact ggcatctgag
      541 aaactggcaa aactgctggc ataggaatta ttgtcaacct gtaacgtaaa ttcattaaac
      601 gtatcgcgtt gcaggttttg ccgtaaaaca gaagtcagca tccagctatc tttcatttca
      661 aaataactgt tgtcattttc gttatcttgt tgttgatccg ttttattagg tgcggaatat
      721 ttagccatta atgataatgt cgcatcatcc cataacggga tattgcgata acgaacatcc
      781 acagaattgg tattcatctg gctggtacgc gaaaaatcac gagagtaaac atcgacatca
      841 tcacggctta aggacatatc aaacagccct acaccaagtg cccagttttc aatccccaca
      901 cccgcggcga catccgtggt taaggttttc cagtccagca tctggatctc atattgcggg
      961 agtttatgtt tgccgaccca gaagtctgcc tctggtgcga agggtaaaaa acctcgcgtt
     1021 gtcaggtaaa tatcgctgaa ctgcatgata ttttcattgg cactgtcacc aaaccaggca
     1081 tcgttatact gctcacccac gttgccatca taggtaacga ccgcatttgc cgttttaccg
     1141 tcctgattat aaacacgctg atttaaggtc aggtcaaacc aaccgctcat ctcattacca
     1201 aaacgtcc
//
LOCUS       DADMHC010000368         1199 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.371, whole genome shotgun sequence.
ACCESSION   DADMHC010000368 DADMHC010000000
VERSION     DADMHC010000368.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.371"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            54..908
                     /locus_tag="JNZ57_004143"
                     /pseudo
     CDS             54..908
                     /locus_tag="JNZ57_004143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416251.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
     gene            959..>1199
                     /gene="chbA"
                     /locus_tag="JNZ57_004144"
     CDS             959..>1199
                     /gene="chbA"
                     /locus_tag="JNZ57_004144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N,N'-diacetylchitobiose transporter subunit
                     IIA"
                     /protein_id="HAY8830114.1"
                     /translation="MMDLDNIPDTQTEAEELEEVVMGLIINSGQARSLAYAALKQAKQ
                     GDFAAAKAMMDQSRMALNEAHLVQTKLIEGDAGEGK"
BASE COUNT          284 a          300 c          313 g          302 t
ORIGIN      
        1 aagcacctta aaatcaccat catacactaa atcagtaagt tggcagcatt acccgcaatt
       61 gggtcattaa actgcccgac agcgtacctg cttcagtatc gcgttccttc tcggcattaa
      121 ttcccggctt tattattctt tccgttatgg ggattattgc ctgggcgttg aatacctggg
      181 gcaccaactt ccatcagatc attatggata ccatctcaac cccactggca tcgttgggta
      241 gcgtggtggg ctgggcctat gtgatctttg ttccactgct ctggttcttc ggtattcatg
      301 gcgcgctggc gctgaccgca ctggacaacg gcattatgac gccgtgggcg ctggaaaata
      361 tcgcgaccta tcagcaatat ggttccgtcg aagcggcgct ggcagccggt aagaccttcc
      421 atatctgggc caagccgatg ctggactcct ttattttcct tgggggcagt ggtgcgactt
      481 taggcctgat cctggctatc tttatcgcct ctcgccgtgc tgattatcgt caggtggcaa
      541 aactggcgct gccgtccggc atcttccaga ttaacgaacc gattctgttt ggtctgccaa
      601 ttatcatgaa cccggtgatg tttatcccgt ttgtactggt acaaccgatt ctggcggcaa
      661 tcaccctcgc agcgtactac atgggcatta ttcctccggt gaccaatatt gcaccgtgga
      721 ccatgccaac cggtctggga gccttcttta acaccaacgg tagcgtcgct gcattgctgg
      781 tcgcactctt caaccttgat atcgcaacgt taatttatct gccctttgtt gtggtggcta
      841 acaaagcgca aaacgcgatt gataaagaag agagcgaaga agatatcgct aacgccctga
      901 aattttaatc gatgccggta cggttaatcg tgccggtaag aagagagagg aacgatgtat
      961 gatggatctc gataacattc ccgatacgca aacagaagct gaagagctgg aagaagtggt
     1021 gatggggctt atcatcaact ccggacaagc gcgcagcctg gcgtatgcgg cactgaaaca
     1081 ggcgaagcag ggcgattttg ccgcagcaaa agccatgatg gatcagtcac ggatggcatt
     1141 gaatgaagcg catctggtac agacgaaact gattgaaggc gatgcgggcg aaggtaaga
//
LOCUS       DADMHC010000369         1199 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.372, whole genome shotgun sequence.
ACCESSION   DADMHC010000369 DADMHC010000000
VERSION     DADMHC010000369.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.372"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..755)
                     /gene="ipaH4.5"
                     /locus_tag="JNZ57_004145"
     CDS             complement(<1..755)
                     /gene="ipaH4.5"
                     /locus_tag="JNZ57_004145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase
                     IpaH4.5"
                     /protein_id="HAY8830115.1"
                     /translation="MKPINNHSFFRSLCGLSCISRLSVEEQCTRDYHRIWDDWAREGT
                     TTENRIQAVRLLKICLDTREPVLNLSLLKLRSLPPLPLHIRELNISNNELISLPENSP
                     LLTELHVNGNNLNILPTLPSQLIKLNISFNRNLSCLPSLPPYLQSLSARFNSLETLPE
                     LPSTLTILRIEGNRLTVLPELPHRLQELFVSGNRLQELPEFPQRLKYLKVGENQLRRL
                     SRLPQELLTLDVSNNLLTSLPENIITLPICTNV"
BASE COUNT          341 a          215 c          259 g          384 t
ORIGIN      
        1 ttaacattcg tacaaatggg caatgtgatt atattttcgg gtaatgaagt tagtaggtta
       61 ttggaaacat ccagtgtcaa tagttcttgc ggtaatctgg ataatctgcg tagttgattt
      121 tcacctacct tcaaatattt taagcgctga ggaaattctg gtagttcctg tagtctgttg
      181 ccggaaacaa agagttcttg tagtctatga ggcaattcag gcaagacagt aaggcgatta
      241 ccttcaatac gtaatattgt tagcgttgat ggaagctctg gtaacgtctc cagactatta
      301 aaacgtgccg agagtgattg taaatatggt ggtaatgatg gcagacatga caaatttcga
      361 ttgaatgaaa tattaagctt aatcagttga gatggaagtg tcgggagtat attcaagttg
      421 ttaccattta catgaagttc tgtcaaaagc ggagaatttt caggtaggga gattaactca
      481 ttgttggaaa tattaagttc acgtatatgc aaagggagtg gtggtaaaga acgtagtttc
      541 agtaagctta aattgagaac aggctcccgg gtatccagac atattttcaa taatcgaacc
      601 gcctggatgc gattttctgt tgttgttcct tccctagccc agtcatccca gatgcggtgg
      661 taatctctgg tacactgttc ttctaccgat aaacgagata tacatgataa gccacaaagg
      721 gaacgaaaaa aagaatgatt gttgatcggt ttcatttatt aacccctcac tattcatatc
      781 ttggtctatt aatgcaaata aaacgagaaa gtctttaaaa aaacaatcct agagctctat
      841 cggcgttttc attccagctg gaggaatatg ttcctgtctt tccagtaacc gtcgattgtt
      901 atatcagtct acccatgtta atgtgaccag ttctactttc atccagtttg gattgatctt
      961 tatcccctat attttcaaac aatttttatc atttaactca ttactgtctc gatattccca
     1021 tagcaaacga tctggttggt tagcccctca aaaaagtcag ttgcacgccg taaatccctg
     1081 ccggtattga gcgaggattt acgggttgtt gttaaggtcc gtaatcgggt cacagttttt
     1141 ccggagtcaa tccggtctgc ggtttatgct tatgcgacgt gattatgaat ggtgcagtc
//
LOCUS       DADMHC010000370         1195 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.373, whole genome shotgun sequence.
ACCESSION   DADMHC010000370 DADMHC010000000
VERSION     DADMHC010000370.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1195)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1195)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1195
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.373"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..600
                     /locus_tag="JNZ57_004146"
     CDS             <1..600
                     /locus_tag="JNZ57_004146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HAY8830116.1"
                     /translation="ERYFFCNELNEKGEPVTWQGRKYEAYPIDGSGFEMNGRGSSARP
                     SLTVSNLFGLVTGMAEDLQSLVGATVVRRRVYARFLDAVNFVAGNPEADPEQELSDRW
                     VVEQMSQLTAMTASFVLATPTETDGALFPGRIMLANTCMWTYRSDECGYTGGAVADEF
                     DKPTTDIRKDRCSKCMRGCELRRNVGNFGGFLSINKLSQ"
     gene            611..>1195
                     /locus_tag="JNZ57_004147"
     CDS             611..>1195
                     /locus_tag="JNZ57_004147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8830117.1"
                     /translation="MTQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPE
                     AYFRIAPEDWLRAEMQGEIVALVHSHPGELPWLSEADRRLQIKSALPWWLVCRGEIHK
                     FRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIDMPDFHREDDWWRNGQNLYLDNMAVT
                     GFYRVPLSSAQPGDILLCCFGASVPNHATIYCGNG"
BASE COUNT          227 a          298 c          407 g          263 t
ORIGIN      
        1 gagcggtatt ttttctgtaa tgagctgaat gaaaaagggg agccggtcac ctggcagggg
       61 cgtaagtatg aggcataccc gattgacggc agcggctttg agatgaacgg ccggggcagc
      121 agtgccagac cgtcgctgac ggtgtccaat ctgttcggtc tggtcaccgg gatggcggaa
      181 gacctgcaga gtctggtggg ggccacggtg gtccgccgcc gggtgtatgc ccgttttctg
      241 gatgcggtga atttcgttgc gggcaatccg gaggcggacc cggagcagga gctgagtgac
      301 cgctgggtgg tggagcagat gtcgcagctg acagccatga cggcctcgtt tgtgctggct
      361 acaccgaccg agacggacgg ggcgctgttt cccggtcgta tcatgctggc gaacacctgt
      421 atgtggacct accgctctga tgagtgtggt tacacgggcg gggctgtggc ggatgagttc
      481 gataaaccca ccacggatat ccgtaaggac agatgcagca agtgcatgcg cgggtgtgaa
      541 ctgcgcagga atgtcggcaa ttttggcggt ttcctttcca ttaataaact ttcgcagtaa
      601 atcccggttt atgacacaga ctgaatcagc gattctggcg catgcccggc ggtgtgcgcc
      661 tgcggagtcg tgcggcttcg tgataagcac gccggagggg gagcggtata tcccttgtgt
      721 gaatatttct gcagagccgg aggcgtattt tcgtatcgca ccggaagact ggctgcgggc
      781 agagatgcag ggggagattg tggcactggt ccacagtcat cccggtgagc tgccctggct
      841 gagcgaggct gaccggcggc tgcagataaa aagcgcactg ccctggtggc tggtctgccg
      901 gggggaaatt cataaattcc gctgtgtgcc acatctgaca ggacggcgct ttgagcacgg
      961 ggtgacggac tgttacacgc tgttccggga tgcataccat ctggcgggaa ttgatatgcc
     1021 ggattttcat cgcgaggatg actggtggcg caacggccag aacctgtacc tggacaatat
     1081 ggcggtcacc ggcttttacc gggtgcccct gtcctctgca cagccgggcg atattctgct
     1141 gtgctgcttt ggtgcttcgg taccgaacca tgccaccatt tactgcggca acggt
//
LOCUS       DADMHC010000371         1179 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.374, whole genome shotgun sequence.
ACCESSION   DADMHC010000371 DADMHC010000000
VERSION     DADMHC010000371.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1179)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1179)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.374"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..1152
                     /locus_tag="JNZ57_004148"
     CDS             <1..1152
                     /locus_tag="JNZ57_004148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HAY8830118.1"
                     /translation="EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN
                     EKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQ
                     ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL
                     YAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA
                     THPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES
                     SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV
                     RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD"
BASE COUNT          292 a          259 c          329 g          299 t
ORIGIN      
        1 gaggcgggca agagtttttg ctgcctgcgc attgataatc ttgagtttat gagtcgtcat
       61 tacggcttaa tgatgcgcgt tcactgtatc cgctcaattt gccgtacgct gctgccgttg
      121 atgcaggaaa acgaaaagtt gtatcaattg ccgggtagtg aactgctgtt agtgctgagc
      181 gggccggaaa cggaagggcg actccagcat atggttaaca tcctgaatag tcggcaaatt
      241 cactggaaca ataccgggct ggatatgggc tatggtgctg cctgggggcg ttttgatgga
      301 aatcaggaaa ccctgcaacc cttgttgggg cagttaagct ggctggcgga gcaatcctgc
      361 gcacatcatc atgtgctggc gctggatagc agagaagaga tggtttccgg gcagaccact
      421 aaacaggtgc tattgctgaa taccattcgc acggcgttag atcagggtga tttgctgctc
      481 tacgcccagc caattcgcaa caaagagggt gaaggttatg atgagatcct cgcgcgactg
      541 aaatatgacg gcggcattat gaccccggat aagtttctgc cccttattgc tcagtttaac
      601 cttagcgcgc gttttgattt gcaagtgctg gaatccttgt tgaagtggct ggcaacacac
      661 ccttgcgaca aaaaaggacc gcgcttttca gtcaatttaa tgccgctcac gctgctgcaa
      721 aagaatattg ccgggcggat tattcgtctg tttaagcgtt atcacatctc cccgcaggcg
      781 gtcattcttg agatcaccga ggagcaggcg ttttctaacg cagaaagcag catgtacaac
      841 atcgagcagc tgcataagtt tggtttccgg attgcgattg atgactttgg caccggctat
      901 gccaactacg aacggttaaa gcgtttgcag gctgatatca tcaaaattga tggcgtcttt
      961 gtgaaagata ttgtcacgaa cacgctggat gcgatgattg tgagatcaat taccgatctg
     1021 gcgaaagcga agtcattgag tgtggtcgcg gagtttgtcg agacgcaaca gcagcaggcg
     1081 ctattgcata agctcggggt gcaatatctg caagggtatt tgattggtcg cccgcagcca
     1141 ttagctgatt aacaggcgta aaaaaaccgg ggaattatc
//
LOCUS       DADMHC010000372         1170 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.375, whole genome shotgun sequence.
ACCESSION   DADMHC010000372 DADMHC010000000
VERSION     DADMHC010000372.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.375"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..776
                     /locus_tag="JNZ57_004149"
     CDS             <1..776
                     /locus_tag="JNZ57_004149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS3-like element IS911 family transposase"
                     /protein_id="HAY8830119.1"
                     /translation="EKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRW
                     LAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTCIWTG
                     KRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPGGVMFHSDQGSHY
                     TSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAAHAIT
                     DYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVASFC"
     gene            972..1127
                     /locus_tag="JNZ57_004150"
                     /pseudo
     CDS             972..1127
                     /locus_tag="JNZ57_004150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343613.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
BASE COUNT          319 a          277 c          334 g          240 t
ORIGIN      
        1 ctgaaaaacc agacggcaga cgggctgtat tacgcagtca ggtacttgag ctacatggca
       61 tcagccatgg ttcggccgga gcaagaagca tcgccacaat ggcaacccgg agaggctacc
      121 agatgggacg ctggcttgct ggcaggctca tgaaagagct ggggctggtc agctgtcagc
      181 agccgactca ccggtataaa cgtggtggtc atgaacatgt tgctatccct aactaccttg
      241 aaaggcagtt cgccgtgacc gagccaaatc aggtgtggtg cggtgatgtg acctgtatct
      301 ggacgggtaa gcgctgggcg tacctcgccg ttgttctcga cctgttcgca agaaaaccag
      361 tgggctgggc catgtcgttc tcgccggaca gcaggctcac catgaaagcg ctggaaatgg
      421 catgggaaac ccgtggtaag cccggcgggg tgatgttcca cagcgatcag ggcagtcatt
      481 atacgagcag gcagttccgg cagttattgt ggcgatacca gatcagacag agtatgagcc
      541 ggcgcggaaa ctgctgggat aacagcccaa tggaacgctt cttcaggagt ctgaagaacg
      601 aatggatgcc ggtggtgggt tacgtaagct tcagcgaggc agctcacgcc ataacggact
      661 atatcgttgg atattacagc gcactaagac cgcacgaata taacggtggg ttacccccaa
      721 acgaatcgga aaatcgatac tggaaaaact ctaactcggt ggccagtttt tgttgaccac
      781 ttcaaacaga gagcagaacg ggatctatac ttttgcgggt caacataaga ggatgagtcc
      841 ttaataaaac aggtcctcag agaatacata ttctgcggag cgtgcggcaa caacaggacg
      901 aacaggggcg gttttcaatt tgcagccgtc aggctgccgt ggttcactcc aacaacggag
      961 acaggtaaat tatggacgaa aagaagctta aagcccttgc ggctgaactg gctaaaggcc
     1021 tcaaaaccga ggccgacctc aatcagtttt cccgtatgca gacgaaatta actgtcgaaa
     1081 cggtgcttaa tgcggaacta actgaccatc tcgggcatga aaaaagctac atccggtagt
     1141 aaacattatc agtgggttat gcgatatgat
//
LOCUS       DADMHC010000373         1158 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.376, whole genome shotgun sequence.
ACCESSION   DADMHC010000373 DADMHC010000000
VERSION     DADMHC010000373.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1158)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.376"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..257
                     /locus_tag="JNZ57_004151"
     CDS             <1..257
                     /locus_tag="JNZ57_004151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016235166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830120.1"
                     /translation="PGGNCSPQNLSDLQNEKNRLCNQSRACAPQMLRKEILRRYEINL
                     ACASVRKQINNQCFGGGDKAHMEEENKAYKTAADCSGLIK"
     gene            254..757
                     /locus_tag="JNZ57_004152"
     CDS             254..757
                     /locus_tag="JNZ57_004152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000720080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830121.1"
                     /translation="MKKIIFSNESAVYDELMIHFPCQPLPHISNDIIGLEELDIVYNF
                     FQKKQWNEIANNLKIKDNSYALELGITFLPEKVFCYYIPLYIYVSLFNKNDFWVFESD
                     FIQQYLCPEYRDYDDFLNFVFNFSDIQLSIIAQFMSYESDAGFFYASKACMDFWEDYS
                     PLLHKKI"
     gene            822..>1158
                     /locus_tag="JNZ57_004153"
     CDS             822..>1158
                     /locus_tag="JNZ57_004153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001522575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HAY8830122.1"
                     /translation="MTLAYRSLRIIHLYHCDYRGLPLTLISPDGATEWCAEYDEWGNL
                     LNEENPQHLQQLIRLPGQQYDEEYGLYYNRHRYYDPLQGRYITQDPIGLEGGWNQYVY
                     ASIHPTYSID"
BASE COUNT          366 a          203 c          244 g          345 t
ORIGIN      
        1 atcctggagg taactgtagt ccccagaacc tgagtgactt acaaaatgaa aaaaacagat
       61 tatgtaacca gtctagagct tgcgctcctc agatgctgag aaaagaaata ttgagacggt
      121 acgagataaa tttggcgtgc gcttcggtca gaaagcagat taataatcag tgctttggtg
      181 gtggagataa ggcccatatg gaagaagaga ataaagcata taaaacagca gctgattgca
      241 gtggcttaat aaaatgaaaa aaataatttt ctctaacgag agtgcagtct atgatgaact
      301 tatgattcat ttcccatgcc agccattacc tcatatttca aatgatatta taggactgga
      361 ggaactggat attgtatata attttttcca aaagaaacaa tggaatgaaa tagccaataa
      421 tttaaaaata aaggataact cttatgcttt agagttagga attacattcc tccctgagaa
      481 agtattctgc tattacatcc ctctgtatat ttatgtctcg ttgtttaata agaatgattt
      541 ttgggttttt gaatccgatt ttattcaaca atatttatgt cctgagtatc gggattacga
      601 tgattttttg aattttgttt ttaatttttc agatatacaa ctatctatta ttgcacagtt
      661 tatgtcttat gaatcagacg ctggattctt ttatgcaagt aaagcttgta tggatttttg
      721 ggaagattat tcacctctat tacataagaa aatttaatcg taaaaggtat aaatggttta
      781 ataaaaaact tgtctactcg ttggagtaga tgaaaaataa gatgacgttg gcatatagat
      841 cactgcgaat aatccacctc taccactgcg actatcgcgg cctgccgctg acgcttatca
      901 gccctgacgg ggcaacagaa tggtgcgcag aatatgatga atggggcaac ctgctgaatg
      961 aagagaaccc gcagcacctg cagcagctta tccgtctgcc ggggcagcag tatgatgagg
     1021 agtacggcct gtattacaac cgccaccgct attatgaccc gctgcagggg cggtatatca
     1081 ctcaggatcc gattgggctg gaaggcgggt ggaatcagta tgtatatgct tccatacatc
     1141 caacatattc tattgatc
//
LOCUS       DADMHC010000374         1147 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.377, whole genome shotgun sequence.
ACCESSION   DADMHC010000374 DADMHC010000000
VERSION     DADMHC010000374.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1147)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1147)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.377"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            92..850
                     /locus_tag="JNZ57_004154"
     CDS             92..850
                     /locus_tag="JNZ57_004154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012599877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HAY8830123.1"
                     /translation="MSFMSSFLLGRFLHPGVFSLCVLLPLLASATTSHISFSYAARQR
                     MQNRARLLKQYQTHLKKQASYIVEGNAESRRALRQHNREQIKQHPEWFPAPLKASDRR
                     WQALVENNHFLSSNHLHNITEVAIHRLEQQLGKPYVWGGTRPDQGFDCSGLVFYAYNK
                     ILEAKLPRTANEMYHYHRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIES
                     PRMGETIRVSRLAEPFWQDHFLGARWILTEETIL"
     gene            1026..>1147
                     /locus_tag="JNZ57_004155"
     CDS             1026..>1147
                     /locus_tag="JNZ57_004155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8830124.1"
                     /translation="MSEYRRYYIKGGTWFFTVNLRNRRSQLLTTQYQMLRNAII"
BASE COUNT          274 a          301 c          277 g          295 t
ORIGIN      
        1 tgaaacctca atagtaatat gcaaataagc aattaataat cccgtttact cctccggtct
       61 tttaaaattc tcaccttcat tcagccggtt tatgtccttc atgtcttcgt tcttgctcgg
      121 cagatttctg catccaggcg tgttttcgtt atgcgttttg ctccctttac tcgccagcgc
      181 caccacatca catatctctt tcagctacgc cgcccgccag cggatgcaaa accgtgcgcg
      241 tttattaaaa cagtaccaaa cccatctgaa aaaacaggcc agctacattg tggaaggcaa
      301 tgccgaaagc agaagggcgc tacgccagca caaccgggag cagataaaac agcatccaga
      361 atggtttcct gcgccgctca aggcaagtga cagacgctgg caggcgttgg tagaaaacaa
      421 tcatttcctc agcagcaacc acctgcataa tatcaccgaa gtggcgattc accgtctgga
      481 gcaacagctt ggcaagcctt acgtctgggg cggcacgcgg cccgatcaag gcttcgactg
      541 tagcgggttg gttttttatg cctacaacaa gatccttgag gctaagctcc cgcgcacggc
      601 taatgagatg tatcactacc atcgggcaac cattgtggca aataacgacc tgcgccgggg
      661 agatttgctg tttttccata tccacagccg tgaaattgcc gaccatatgg gcgtgtatct
      721 gggagacggt cagtttattg agtcgccgcg catgggggaa accattcggg taagtcggtt
      781 agctgaacct ttctggcagg atcatttttt gggcgcgcgg tggatattga cggaagagac
      841 gattttgtag gacggataag gcgtttacgc cgcatccggc ggtggtgcgc agatgcctga
      901 tgcgacgctg acgcgtctta tcatgcctac aaatctgtgc gtttttgcga gccgctttcc
      961 tgttattcca tcacctcatt gccgaccttt ccttttcttc ttaccgttga gaaaaaggag
     1021 tcgccatgtc tgaatatcgt cgttattaca tcaagggggg aacctggttt ttcacggtga
     1081 atttacgcaa tcgtcgaagc caactcttga ccacccagta ccagatgctc cgtaacgcca
     1141 ttattaa
//
LOCUS       DADMHC010000375         1141 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.378, whole genome shotgun sequence.
ACCESSION   DADMHC010000375 DADMHC010000000
VERSION     DADMHC010000375.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1141)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1141)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.378"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(95..577)
                     /locus_tag="JNZ57_004156"
     CDS             complement(95..577)
                     /locus_tag="JNZ57_004156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY8830125.1"
                     /translation="MEINVTAPALLTDEHILQPFDCGNEVLSNWLRGRAMKNQMLNAS
                     RTFVICLEDTLRVVGYYSLATGSVTHAELGRSLRHNMPNPVPVVLLGRLAVDVCTQGH
                     GFGKWLLSDAIHRVVNLADQVGIKAVMVHAIDDDARAFYERFGFVQSVVAPNTLFYKV
                     "
     gene            complement(568..870)
                     /locus_tag="JNZ57_004157"
     CDS             complement(568..870)
                     /locus_tag="JNZ57_004157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858193.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HAY8830126.1"
                     /translation="MEVFMSTAASVRKTPREHQINIRATDEERAVIDYAASLVNKNRT
                     DFIMELAYQEAKNIILDQRLFVLDNERYDSFITQLEAPVQNAEGRERLMAVKPEWK"
BASE COUNT          335 a          278 c          239 g          289 t
ORIGIN      
        1 agagtaacgt tgggtttttc tgctcattat tggctccttc tgatgccatt ctatttcagg
       61 aaggagtgtc cgttaaactc aggctacctc agactcagac tttataaaac aaggtattag
      121 gtgccacaac tgactgaaca aaaccaaaac gctcataaaa tgctctggcg tcatcatcaa
      181 ttgcatgtac cataacagcc ttaatgccaa cctgatcagc cagattgaca acccggtgaa
      241 tggcatcact tagtagccat ttaccgaaac catgcccctg ggtacaaaca tcaacagcca
      301 gacgccctaa cagaacaaca gggacaggat tgggcatgtt atgccgcaaa ctgcgaccaa
      361 gctcggcatg agtgacggaa ccagtagcta atgagtagta tcccacaaca cgtaaagtat
      421 cctccaagca aataacgaac gtgcgagaag cattgagcat ctggtttttc atagcccgac
      481 cacgtaacca gttacttagc acctcatttc cacagtcaaa tggctgaagt atatgctcat
      541 ccgtcaacaa tgctggcgcg gtgacattta tttccattca ggctttaccg ccatcagacg
      601 ttcacgccct tctgcattct gcacaggagc ttccagttgc gtaataaacg aatcataacg
      661 ttcgttatcc agcacaaata aacgttgatc caagataatg tttttagctt cctggtacgc
      721 cagttccatg atgaaatcgg tacggttctt attgaccaag ctcgcagcat aatcaataac
      781 ggctcgttcc tcatcagttg cccggatgtt aatctgatgt tctcgcggtg ttttacggac
      841 gcttgcagct gtagacataa aaacctccat tggtaacaat ttgctatgca attaatgtta
      901 tcgcaaatgg taacagaacg ctatacagaa tcacttacgg gaaaagcgat cccctgataa
      961 aaacaatggc agagacctga acattgtgac gatgatctgt gtcggcgcac aaatcatgtc
     1021 tgattacggc cgtttaatgt gattttgata atgaaatgcc tgaaccacgg cagcctggcg
     1081 gctgcaaatc ggggtgtggc agaatatgag ctttcagagt aaccatccag aatgagttcc
     1141 c
//
LOCUS       DADMHC010000376         1133 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.379, whole genome shotgun sequence.
ACCESSION   DADMHC010000376 DADMHC010000000
VERSION     DADMHC010000376.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1133)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.379"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..337)
                     /gene="rcnB"
                     /locus_tag="JNZ57_004158"
     CDS             complement(<1..337)
                     /gene="rcnB"
                     /locus_tag="JNZ57_004158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni(II)/Co(II) efflux transporter accessory
                     subunit RcnB"
                     /protein_id="HAY8830127.1"
                     /translation="MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIA
                     DFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIK
                     AYDGEIFYHR"
     gene            complement(556..>1133)
                     /gene="rcnA"
                     /locus_tag="JNZ57_004159"
     CDS             complement(556..>1133)
                     /gene="rcnA"
                     /locus_tag="JNZ57_004159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nickel/cobalt efflux transporter RcnA"
                     /protein_id="HAY8830128.1"
                     /translation="QSAEPWLQLISAVIIISTAFWMFWRTWRGERNWLENMHGHDYEH
                     HHHDHEHHHDHGHHHHHEHGEYQDAHARAHANDIKRRFDGREVTNWQILLFGLTGGLI
                     PCPAAITVLLICIQLKALTLGATLVVSFSIGLALTLVTVGVGAAISVQQVAKRWSGFN
                     TLAKRAPYFSSLLIGLVGVYMGVHGFMGIMR"
BASE COUNT          297 a          274 c          283 g          279 t
ORIGIN      
        1 agcgatgata aaaaatctca ccgtcgtagg ctttaatgat tttaccgtcg gtgtcgctga
       61 tcaacacgta cgcgccaccc atataggtcc agtgcgtccc ggcatcaggc gcgggcaggt
      121 tacgtaactg ccactgctta atgttgtact catcggtgcg gtacatctct gggacggtat
      181 cgcctggttt gaaatgctta aagtcagcaa tgaaactgct taactcatac ttagaaattc
      241 ccgaggtatt ggtcgaaccc gcggtggctg gtgcggccca ggcggcactg gtaaccagca
      301 aaagcgcacc cagcaacatc ttatttttaa tggtcataaa ctctccactt tggggatctg
      361 taatatcagt cgcatatctt tcctgccata caatataact gacaagcgat attttgttag
      421 tgatcccatg atttcgtaaa aagtgtaaat gaaaggatgc cctaaaagca tccttagcga
      481 gcagagagtc agcggaaata gctgatttaa gaatcatcct gggctgaaga taacatgcaa
      541 gcctaaagga ttgagttatc gcattatgcc catgaagcca tgtacgccca tatacacacc
      601 gactaagcca atcaacagac tggaaaaata gggggcgcgt ttagcgagag tgttaaatcc
      661 gctccagcgt tttgcgacct gctgaacgct gattgctgcg ccaacgccta cggtgacaag
      721 cgttaacgcc aggccaatgc tgaaactgac gaccagtgtt gcgcccagtg tcagggcttt
      781 caactgaatg catatcaaca gcacggtaat tgctgccggg caggggataa ggccaccggt
      841 taagccaaat aacaaaattt gccagttggt gacctctcta ccatcaaagc gtcgtttaat
      901 gtcattggca tgggctcgtg catgggcatc ctgatactcg ccatgttcgt gatggtgatg
      961 atgtccatgg tcgtggtgat gttcgtgatc gtgatgatga tgctcataat catgcccgtg
     1021 catattctcc agccagttgc gttcgccgcg ccaggtacgc cagaacatcc agaacgcggt
     1081 gctaataatg atcactgcgg aaatcagctg gagccacggt tctgctgatt gag
//
LOCUS       DADMHC010000377         1129 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.380, whole genome shotgun sequence.
ACCESSION   DADMHC010000377 DADMHC010000000
VERSION     DADMHC010000377.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1129)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1129)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.380"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            17..>1129
                     /locus_tag="JNZ57_004160"
     CDS             17..>1129
                     /locus_tag="JNZ57_004160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009950534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HAY8830129.1"
                     /translation="MNRSGKRLFDKALPNDENKLRSLISDLKQHGQILLVVDQPATIG
                     ALPVAVARSEGVLVGYLPGLAMRRIADLHAGEAKTDARDAAIIAEAARTLPHALRTLK
                     LADEQIAELSMLCGFDDDLAAQTTQASNRIRGLLTQIHPALERVLGPRLEHPAVLDLL
                     QRYPSPEKLASLGEKKLAAQLCKLAPRLGKRLAADIAQALAEQTVVVPGTNAAAVVLP
                     RLALQLITLRKQRDEVALEVELRVLAHPLYPVLTSMPGVGVRTAARLLTEVACRAFAS
                     AAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKALKRALFLSAFAALRDPLSRAYYTRK
                     MSQGKRHNQALIALARRRCDVLFAMMRDGTFYTPQGS"
BASE COUNT          236 a          367 c          294 g          232 t
ORIGIN      
        1 gcatcacgct gttgccatta atcgttcagg taaacgcctg ttcgataaag cattacccaa
       61 cgacgaaaac aaactcaggt cgctaatatc tgacctgaaa caacatggtc agatactgct
      121 ggttgttgat cagccagcta ccatcggtgc gttacctgtc gccgttgccc gctcagaagg
      181 agtccttgtc ggatacctcc ctggactggc catgcgccgc atagccgact tacacgccgg
      241 tgaagctaaa actgatgctc gtgacgctgc catcattgcc gaagctgccc gtaccctgcc
      301 tcacgcgcta cgcacgctga aactggctga cgagcaaatc gccgaactct ccatgctctg
      361 cggcttcgat gatgatcttg ccgcacagac aacgcaggcc agcaaccgta tccgcggcct
      421 tctgacccag atacatccgg cactggagcg cgttctcggt ccgagacttg agcacccggc
      481 ggtactcgat cttctccagc gatatccctc accagaaaaa ctcgcttcgc tgggtgagaa
      541 gaagctggca gcccagctct gcaaacttgc gcctcgtctg ggtaaacgcc ttgcagcaga
      601 catagctcag gcactggccg aacaaaccgt cgtcgttccc ggcacgaatg ccgctgccgt
      661 agtactgcca cgtctggcac tccagctcat cacgctgcgt aagcaaagag acgaggtggc
      721 gcttgaggta gaactgcgag ttcttgctca ccctctttac ccggtcctga ccagtatgcc
      781 cggagtcggt gtcaggaccg cagccagact cctcaccgag gtcgcctgcc gcgccttcgc
      841 ctctgccgca catctcgctg cttatgctgg ccttgcgccg gtaactcggc gatccggctc
      901 gtcaatacgc ggtgagcatc cctcgcgacg gggtaataaa gctctcaaac gggcgttgtt
      961 cctgtcggcc ttcgccgcgc tcagggatcc gctctccagg gcttactaca cccgcaaaat
     1021 gagtcaggga aaacgacaca atcaggcgct tatcgccctg gcgagacgac gctgcgacgt
     1081 tctgttcgcc atgatgcgcg acgggacttt ttataccccg caggggtca
//
LOCUS       DADMHC010000378         1110 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.381, whole genome shotgun sequence.
ACCESSION   DADMHC010000378 DADMHC010000000
VERSION     DADMHC010000378.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1110)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1110)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.381"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            408..644
                     /locus_tag="JNZ57_004161"
     CDS             408..644
                     /locus_tag="JNZ57_004161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component-system connector protein YcgZ"
                     /protein_id="HAY8830130.1"
                     /translation="MHQNSVTLDSAGAITRYFAKANWPTQQETLGEIVTEILKDGRNL
                     SRKSLCAKLLCRLEHATGEEEQKHYNALIGLLFE"
     gene            687..959
                     /locus_tag="JNZ57_004162"
     CDS             687..959
                     /locus_tag="JNZ57_004162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component-system connector protein YmgA"
                     /protein_id="HAY8830131.1"
                     /translation="MKTSDNERIKYEITGQAVLQILRMKINFSLQTLIKQLLVMKSAE
                     EDAFRRDLIDSIIRDFSNSDSGGPNRRTATADNKSMFNGKKINRIH"
     gene            988..>1110
                     /gene="ariR"
                     /locus_tag="JNZ57_004163"
     CDS             988..>1110
                     /gene="ariR"
                     /locus_tag="JNZ57_004163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm/acid-resistance regulator AriR"
                     /protein_id="HAY8830132.1"
                     /translation="MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNL"
BASE COUNT          367 a          181 c          229 g          333 t
ORIGIN      
        1 tgttcctgcg atttgctatc gaaaccattt cttcgatttt tttgacaggt tcgtcgtcac
       61 gtatatggct acgataaata agggtggtaa gcattaacaa tccagggtaa tgggtgaggc
      121 gagagtaaga cggtaacaga catatcttct tgtgtctttc ttttaatacc aaaacataac
      181 cgtttcttta cattgataaa aaatggaaaa agttgaacac tagttggcga aaaatcttgt
      241 acagattgtc agttaaatga tgcaatatgt tttatcataa cacattgttt tatatgtatt
      301 agcactaatt gcaaaaaaat aatttatcat tctgtacaca tatttcgtac aagtttgcta
      361 ttgttgcctc acttaacatt gattaacatt tttaacagag gcgtagcatg catcaaaatt
      421 cagtgacttt agattctgcg ggagcaatca ctcgttactt tgcaaaagct aactggccta
      481 ctcagcagga aactctcggg gaaattgtga ctgagatttt gaaagatgga cgtaatctga
      541 gtcgaaagtc gctttgtgcc aaacttcttt gccgactgga acacgcgact ggggaagagg
      601 aacagaaaca ttataatgca ctaattgggt tgctttttga ataatgcaac agcctgatta
      661 tttaacaggt tagctatgaa gtcgttatga agacatctga taatgaacgt ataaaatatg
      721 aaattactgg ccaggcggtg ctccagatac tgcgcatgaa gataaatttt tcattgcaga
      781 ctcttattaa gcaattactc gtaatgaaat cggctgagga agatgctttc cgacgcgatt
      841 taattgacag cataattcgt gattttagca atagtgattc aggagggcca aaccgaagaa
      901 cagcgacagc tgacaataaa agtatgttca atggtaagaa aataaacaga atacattaaa
      961 atttcataag taagatgaga ggttaccatg cttgaagata ctacaattca taatgcaata
     1021 actgataaag cgttagcaag ttactttcgc agttcgggta atttgttaga agaagagtca
     1081 gcagtgttag ggcaggctgt caccaattta
//
LOCUS       DADMHC010000379         1108 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.382, whole genome shotgun sequence.
ACCESSION   DADMHC010000379 DADMHC010000000
VERSION     DADMHC010000379.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1108)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1108)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.382"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..793)
                     /locus_tag="JNZ57_004164"
     CDS             complement(<1..793)
                     /locus_tag="JNZ57_004164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HAY8830133.1"
                     /translation="MLPTNNNHRLISNSFSTYSIDTSRAYESYLTHWTEWKNNRIQEE
                     QRDIAFQRLVSCLQNQETNLDLSELGLTTLPEIPPGIKSINISKNNLSLISPLPASLT
                     QLNVSYNRLIELPALPQGLKLLNASHNQLITLPTLPISLKELHVSNNQLCSLPVLPEL
                     LETLDVSCNGLAVLPPLPFSLQEISAIGNLLSELPPLPHNIHSIWAIDNMLTDIPYLP
                     ENLRNGYFDINQISHIPESILNLRNECSIDISDNPLSSHALQSLQR"
BASE COUNT          321 a          158 c          259 g          370 t
ORIGIN      
        1 atctttgcag ggattgcaga gcatgggatg acaatgggtt atcactaata tctattgaac
       61 attcattcct cagattaaga atgctttccg ggatatgact tatctgattt atgtcaaaat
      121 aaccgttcct taaattttcc ggcaggtatg gaatatcggt taacatattg tcgattgccc
      181 atatggagtg aatgttgtga ggtagagggg ggagttcact aagaagattc cctattgcgc
      241 taatctcttg taaagaaaat ggtaaaggtg gtaaaactgc cagcccatta catgatacat
      301 ctaatgtttc cagtagttct ggtaaaacag gaagagaaca taattgatta tttgagacat
      361 gaagctcctt caaagatatg gggagtgtgg gtagtgtgat tagttgattg tgggacgcat
      421 tcaataattt aagtccttga ggcaaagcag gcagttcaat aagtctgtta tagctgacat
      481 taagctgtgt aagggacgca ggcaatgggg agattaagct taaattattt ttacttatat
      541 taattgattt aattcccggg gggatttcag gtaatgttgt caggcctaat tcagacaagt
      601 ctaggttcgt ctcttggttt tgtagacatg atactagtcg ctgaaaagcg atgtctcgtt
      661 gttcttcttg tatgcggtta tttttccatt cagtccaatg ggttagataa ctttcatatg
      721 cgcggctagt gtcgattgaa taagtggaga acgaatttga aattaatctg tgattgttat
      781 ttgtcgggag cataaatatc agggcgtatt ctttatgttg agaggtgttg gattcttttt
      841 tatctgcttt gcaatgttat tggttccctt cagcagtaga caggaacttc tggaggaggc
      901 ggatatatag tttgtgtaag catattaact ccatatgtta tatattgaag aacttctgct
      961 ttacactatc ctaaactgga tcggtttaat gtaaaaaaac gatacttttt gggggagggg
     1021 gcaatttttc cttaaggtat gaaaaaagga gctgaagcta tataatagct attaatgcca
     1081 ctgatatcag tgaatcatgt atataaaa
//
LOCUS       DADMHC010000380         1108 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.383, whole genome shotgun sequence.
ACCESSION   DADMHC010000380 DADMHC010000000
VERSION     DADMHC010000380.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1108)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1108)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.383"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..521
                     /locus_tag="JNZ57_004165"
     CDS             <1..521
                     /locus_tag="JNZ57_004165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY8830134.1"
                     /translation="NYTKLGEFTPPKTDAGTGRTIHLVQPAIDALKSQAEMTMLGKQH
                     SVEVKQREYGRSTVHKCTFVFSPQVIKQRQFSGPHYKVDSIRESWTSILKRAGLRHRK
                     SYQSRHTYACWSLAAGANPSFIASQMGHTNAQMVFNVYGAWMKDNNHEQIELLNKRLS
                     ESVPCMPHKKVG"
     gene            557..>1108
                     /locus_tag="JNZ57_004166"
     CDS             557..>1108
                     /locus_tag="JNZ57_004166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005117943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HAY8830135.1"
                     /translation="MPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDN
                     GVQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRTWIKERGQDYPAQTLT
                     THLFIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARKKQGKDALVVGWNIHDT
                     TRLWLEGWIASQQGWRIDVLAHSL"
BASE COUNT          321 a          267 c          273 g          247 t
ORIGIN      
        1 ggaattatac aaaacttggc gaattcactc caccaaaaac cgatgctggc accggaagga
       61 caattcatct ggttcaacca gctattgatg ctcttaaaag tcaggcggaa atgaccatgc
      121 ttggaaagca acattctgta gaggtaaagc agagggaata tgggagaagt actgtgcata
      181 aatgcacttt tgtttttagt cctcaggtaa taaaacagcg gcagttttcc ggaccgcact
      241 ataaggttga ctccatcagg gagtcatgga caagtatctt aaaacgcgca ggtctgagac
      301 acagaaaatc gtaccaatcc aggcatactt atgcatgctg gtcacttgcc gctggagcta
      361 atcctagttt tatcgcaagc cagatgggcc acacaaacgc acaaatggta ttcaatgttt
      421 acggagcatg gatgaaagac aacaatcacg aacagataga actccttaac aaaagactat
      481 ctgaaagtgt cccatgtatg ccccataaga aagtggggta aaataaaaac ttgtaaaatc
      541 agttagttta cccttaatcc ctgtcacgtt acgcgcgtgg cagaggcgtt acggattgct
      601 gaaaccgcaa cggacagacg gcggtcatcg gctgttcaac gatgccgata ttgaccggat
      661 ccgcgagatc aaacgctgga tcgacaacgg cgtgcaggtc agcaaagtta aaatgctgct
      721 cagtaatgaa aatgttgatg tgcagaacgg ctggcgcgat cagcaagaaa cattactgac
      781 ttacttgcaa agcggcaatc tgcatagcct gcgaacgtgg atcaaagagc gcggtcagga
      841 ttaccccgcc cagacgctca ccacgcattt gtttattcct ctgcgtcgac ggcttcagtg
      901 ccaacaaccg actctccagg cgctgctggc gatcctcgac ggcgtactga tcaactacat
      961 cgccatctgt ctggcttcgg cacgtaaaaa acagggtaaa gatgcgctgg tggttggctg
     1021 gaatattcac gataccaccc gtctgtggct ggagggctgg attgccagtc aacaaggatg
     1081 gcgcattgat gtcctcgccc actcgctc
//
LOCUS       DADMHC010000381         1077 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.384, whole genome shotgun sequence.
ACCESSION   DADMHC010000381 DADMHC010000000
VERSION     DADMHC010000381.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1077)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.384"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(15..707)
                     /gene="ospZ"
                     /locus_tag="JNZ57_004167"
     CDS             complement(15..707)
                     /gene="ospZ"
                     /locus_tag="JNZ57_004167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000625270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector cysteine
                     methyltransferase OspZ"
                     /protein_id="HAY8830136.1"
                     /translation="MISPIKNIKNVFPINTANTEYIVRNIYPRVEHGYFNESPNIYDK
                     KYISGITRSMAQLKIEEFINEKSRRLNYMKTMYSPCPEDFQPISRDEASIPEGSWLTV
                     ISGKRPMGQFSVDSLYHPDLHALCELPEISCKIFPKENSDFLYIIVVFRNDSPQGELR
                     ANRFIELYDIKREIMQVLRDESPELKSIKSEIIIAREMGELFSYASEEIDSYIKQMND
                     RLSQIKARMSVT"
     gene            763..915
                     /locus_tag="JNZ57_004168"
                     /pseudo
     CDS             763..915
                     /locus_tag="JNZ57_004168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          323 a          213 c          183 g          358 t
ORIGIN      
        1 acaattaata tacattaagt aacagacatt cgagccttga tttgagaaag cctgtcattc
       61 atttgtttta tgtagctatc tatttcctct gatgcataac taaaaagttc tcccatttca
      121 cgagcaataa taatctcaga tttaatagac tttaactctg gcgactcatc tcttaacact
      181 tgcataatct ctctttttat atcatatagt tctataaacc gatttgcccg tagttctcct
      241 tggggagaat catttctgaa tacaacaatt atatacaaaa aatcactatt ttctttaggg
      301 aagatcttac aactaatctc tgggagctca cataatgcat gtaagtcagg atggtacaaa
      361 ctatccacag aaaattgccc cataggacgt tttccagata taactgtcaa ccagcttcct
      421 tccggtatac tggcttcgtc tctggaaata ggctgaaaat cttccggaca tggagaatac
      481 attgtcttca tataattaag tcgtctggat ttctcattaa taaactcctc tatttttaat
      541 tgtgccatac ttctggttat accagagata tacttcttgt catatatgtt tggtgattca
      601 ttaaagtaac catgttcaac tctaggataa atatttctca ctatatattc agtatttgca
      661 gtatttattg gaaatacgtt cttaatattc ttgatgggac taatcatttt aatctctata
      721 ctcaaatata aacattacca tgaacaatat aattgttcct aagtggaatg tctccacgga
      781 gaacacttta tctatcggga aatagtgcgg gcaacagtgt ttaattatat cgagtgcgat
      841 tacaatcgct ggcgacggca ccgttggtgt ggcggcctca gtccggaaca atttgaaaac
      901 cagaacctcg cttaggcctg tgtccatatt acgtgggtag gctcacagag cctcacttac
      961 gactgcgtcc atattatgtg ggtaggatca ataaagacgt tttatatgtg tctgcttgca
     1021 gccagaaaat ttataccctg caggtatcat aaacatgctt gataacttaa ttggggc
//
LOCUS       DADMHC010000382         1058 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.385, whole genome shotgun sequence.
ACCESSION   DADMHC010000382 DADMHC010000000
VERSION     DADMHC010000382.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.385"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..932
                     /gene="shiA"
                     /locus_tag="JNZ57_004169"
     CDS             <1..932
                     /gene="shiA"
                     /locus_tag="JNZ57_004169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="shikimate transporter"
                     /protein_id="HAY8830137.1"
                     /translation="TLRAIQGFAVGGEWGGAALLSVESAPKNKKAFYSSGVQVGYGVG
                     LLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLGALWVRNGMEESAEFEQQQHY
                     QAAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNMGLPRELFL
                     NIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVF
                     FSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALIT
                     YFAGNWHSVAIYLLAGCLISAMTALLMKDSQRA"
BASE COUNT          231 a          230 c          278 g          319 t
ORIGIN      
        1 tgacgctgcg tgccattcag ggatttgccg tcggcggcga atggggaggc gcggcgttgc
       61 tttccgttga aagtgcacca aaaaataaaa aagcctttta cagtagcggt gtacaagttg
      121 gctacggtgt aggtttactg ctttcaactg gactggtttc attgatcagt atgatgacga
      181 ctgacgaaca gtttttaagc tggggctggc gcattccttt cctgtttagc atcgtactgg
      241 tactgggagc attgtgggtg cgcaatggca tggaggagtc cgcggaattt gaacaacagc
      301 aacattatca agctgccgcg aaaaaacgca tcccggttat cgaagcgctg ttacgacatc
      361 ccggtgcttt cctgaagatt attgcgctac gactgtgcga attgctgacg atgtacatcg
      421 ttactgcctt tgcacttaat tattcaaccc agaatatggg gctaccgcgc gaacttttcc
      481 ttaatattgg tttgctggta ggtggattaa gctgcctgac aattccctgt tttgcctggc
      541 ttgccgatcg ttttggtcgc cgtagggttt atatcacagg tgcgttaatc ggaacgttga
      601 gcgcatttcc tttctttatg gcgcttgaag cacaatctat tttctggata gttttcttct
      661 ccataatgct ggcaaacatt gcgcatgaca tggtggtgtg tgtgcaacaa ccgatgttta
      721 ccgaaatgtt tggtgccagt tatcgctata gtggcgctgg agtcggttat caggttgcca
      781 gtgtggttgg cggtggattt acacctttta ttgccgctgc actcatcact tactttgccg
      841 ggaactggca tagcgtcgcc atttatttgc tggctggatg cctgatttcc gcaatgaccg
      901 ctttgttgat gaaagacagt caacgcgctt gatagcctgg cgaagatcat ccgatcttcg
      961 ccttacactt ttgtttcaca tttctgtgac atactatcgg atgtgcggta attgtatgga
     1021 acaggagaca cacatgaata ataagggctc cggtctga
//
LOCUS       DADMHC010000383         1056 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.386, whole genome shotgun sequence.
ACCESSION   DADMHC010000383 DADMHC010000000
VERSION     DADMHC010000383.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1056)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1056)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.386"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..291)
                     /locus_tag="JNZ57_004170"
     CDS             complement(<1..291)
                     /locus_tag="JNZ57_004170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830138.1"
                     /translation="MLEKSLATLFALLILATLINRFLLWRLPERKGGEVTLRIRTWWG
                     IVICFSLVISGPRWMTLAFFALISFLALKEYCMLISVHFPRWLYWVIPLNYLL"
     gene            complement(291..896)
                     /locus_tag="JNZ57_004171"
     CDS             complement(291..896)
                     /locus_tag="JNZ57_004171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707670.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HAY8830139.1"
                     /translation="MTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLTALALSLFTGL
                     LLVLVAQPILFLLLPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALY
                     LPFLFLPESNASLVILMLFCTILTEFCGLLAQTINGIRSYAGPFGKSDRALIFGLWGL
                     AVAIYPQWMQWNNLLWSIASILLLWTAINRCRSVLFMSAER"
BASE COUNT          350 a          242 c          223 g          241 t
ORIGIN      
        1 aagcaaatag ttaagaggaa taacccaata taaccaccgc ggaaaatgta cggatataag
       61 catacaatat tctttcaatg ccagaaaact tatcagcgca aaaaacgcca acgtcatcca
      121 gcgtggacct gaaatcacca gtgaaaaaca aatgacgatg ccccaccagg tacgaatacg
      181 taatgtaacc tcaccccctt ttctctccgg taaccgccat agcagaaaac ggtttatcag
      241 cgttgctaaa attaacaacg cgaaaagtgt tgccagagat ttttccagca ttatctttca
      301 gcactcataa aaagcacact ccgacaacga ttaatcgcag tccagagaag cagaattgaa
      361 gcaatgctcc ataaaagatt attccattgc atccactgtg gataaatggc aacggctagc
      421 ccccacagac caaatattaa cgcgcgatcg cttttgccga atggaccggc ataactacga
      481 ataccgttaa tcgtctgcgc gagtaaaccg caaaactcag tcaatatggt gcaaaataac
      541 atgagtatta cgagtgatgc gttactttcc ggtaaaaata aaaacggtaa atagagcgca
      601 atatcggaaa taacatcgcc agtttcattc aaaatcgccc ccagacgtgt ttgctgattg
      661 cactcacgcg ccaacatgcc atccagcgca ttgagcgcca tacggataaa aagcacgatg
      721 ggcaatagca aaaagaggat gggttgtgcc accaacacca acagcaatcc ggtaaaaaga
      781 gaaagcgcca gtgccgtaag agtgatgtga ttcgctgtaa cgtggtgctt ataaagccaa
      841 aacatcgtcg gccttaacag cgactgaaag agcggtttta tctggtagag cgtcatttat
      901 cattccgtga tattcagttt gctctatggt gcatcaattg tgatggcgga gatatcacaa
      961 cgcggagcat caacgtaaat tcggaatata tcatgatgtg gtggatggtt ttcctacaca
     1021 tctgtttgat taccgactgg atgtcagtga gggtaa
//
LOCUS       DADMHC010000384         1042 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.387, whole genome shotgun sequence.
ACCESSION   DADMHC010000384 DADMHC010000000
VERSION     DADMHC010000384.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1042)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1042)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1042
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.387"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(504..579)
                     /locus_tag="JNZ57_004172"
     tRNA            complement(504..579)
                     /locus_tag="JNZ57_004172"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(544..546),aa:Ile,seq:cat)
BASE COUNT          314 a          222 c          180 g          326 t
ORIGIN      
        1 caatagcgtt ggttaatgag catagccacg ctcctgtaac gctcacaaaa ctcatctgcc
       61 tgcggcgggt gttctggtca gtagtagatg tttaaggcgt ggcagagaca tttcatcctt
      121 actctacggc attgttctac atacattggt tgtggtactc actcatcatc agtgagcgaa
      181 cagagaatag ttcagtgatt tgagtaatta acctgattaa atgaatgggt ataataaatg
      241 ataatactct ggctttatcg ttaattactt aattccacat gtaagcaatt tgcccgcttg
      301 gcatagcggg cattttttcc aggtactttt gaatgagtac tgatggataa atacattgca
      361 gtggcgtgcc acgtaccaaa acaccagccc tcattcgaaa ccacccaccg cacttcttcc
      421 tttaaatggc gttagtcatg aaatatagac cgccatcgag taccccttga cccttaactc
      481 ttcctgatac atgaatgatg atttggtggc ccctgctgga cttgaaccag cgaccaagcg
      541 attatgagtc gcctgctgta accactgagc taaagggcct taagtatgca ataacaatac
      601 ttataaacca cgcaataaac atgatgatct tatgatgtaa atagcagatt tttatgcgtt
      661 ctcatccatc ctgggtcgtc aatacatgcg acataaaacc cgacattgcc tccattcgca
      721 aagtcgatac tcgcagtcaa caagcaaatg ttaataatta gcactatcta tagttatcat
      781 cgattcaatg atactttgta atgattttgt atctaataat ataactttat tacattagct
      841 gaagagtttt cgcatcatta tgatatctgt tacttttcac tccataaaaa taaacttcat
      901 atagcaatat attctttcat agatcttatt ctgctaatca ttagtttcgt atgagcgatt
      961 tttgacagtt gcctctccag accacatcga taattaaaaa aacagattta agcattatcc
     1021 ttttccatat aaatactgga ta
//
LOCUS       DADMHC010000385         1009 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.388, whole genome shotgun sequence.
ACCESSION   DADMHC010000385 DADMHC010000000
VERSION     DADMHC010000385.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.388"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            201..395
                     /gene="bfd"
                     /locus_tag="JNZ57_004173"
     CDS             201..395
                     /gene="bfd"
                     /locus_tag="JNZ57_004173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HAY8830140.1"
                     /translation="MYVCLCNGVSDKKIRQAVRQFHPQSFQQLRKFIPVGNQCGKCIR
                     AAREVMQDELMQMPEFKEIA"
     gene            468..944
                     /gene="bfr"
                     /locus_tag="JNZ57_004174"
     CDS             468..944
                     /gene="bfr"
                     /locus_tag="JNZ57_004174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HAY8830141.1"
                     /translation="MKGDVKIINYLNKLLGNELVAINQYFLHARMFKNWGLMRLNDVE
                     YHESIDEMKHADKYIERILFLEGIPNLQDLGKLGIGEDVEEMLQSDLRLELEGAKDLR
                     EAIAYADSVHDYVSRDMMIELLADEEGHIDWLETELDLIGKIGLQNYLQSQIKVKD"
     gene            complement(941..>1009)
                     /locus_tag="JNZ57_004175"
     CDS             complement(941..>1009)
                     /locus_tag="JNZ57_004175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HAY8830142.1"
                     /translation="PFRPFLAAAGFVIGWDSLLIGR"
BASE COUNT          300 a          206 c          231 g          272 t
ORIGIN      
        1 gctaaagttc tgggctaatt acacgttaat tagttttgaa ttgaaaaggg cgcttcggcg
       61 ccctttttgc tgcccgtaat ttgagctcga aatatttagt cgtaattttg ctcgctgaac
      121 tatggcgcaa ataaaactgt gctattgtaa tcataaccat tctcatttac actttgcgca
      181 gaatttgaac gggagcaatc atgtacgttt gtttgtgtaa tggtgtaagt gacaaaaaaa
      241 ttcgccaggc agtccgtcag tttcatccgc aatctttcca acaattgcgt aagtttattc
      301 ctgtgggaaa tcaatgcggt aagtgcattc gcgccgcgcg cgaagtgatg caggacgagt
      361 tgatgcagat gccagaattt aaagagattg cctgaagacc acgcttattt tttgacatcc
      421 cgctagcccc atctacgctc taatagtgga agcggaggga ctataaaatg aaaggtgatg
      481 ttaaaatcat aaattatctc aataaactat tgggaaatga gcttgtcgca atcaatcagt
      541 attttctcca tgcccggatg tttaaaaact ggggcctgat gcgtctcaat gacgtcgaat
      601 accatgaatc catcgatgag atgaaacacg ctgataaata tatcgagcgt attttgtttt
      661 tagaaggaat ccccaactta caggatttag gcaaactggg gattggtgaa gatgtcgagg
      721 agatgctgca atccgacctg cgattagaac tggaaggcgc gaaggatctg cgtgaggcta
      781 tcgcatatgc cgacagcgtt catgactatg ttagccgcga tatgatgatc gagctccttg
      841 ctgatgaaga aggtcatatc gactggctcg aaactgaact ggatctcatc ggtaaaattg
      901 gcctacaaaa ttacctgcaa tcacaaatta aagttaaaga ttaacggcct atcagcaaac
      961 tatcccagcc tataacgaaa cccgcagccg ccagaaatgg cctaaaagg
//
LOCUS       DADMHC010000386         1009 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.389, whole genome shotgun sequence.
ACCESSION   DADMHC010000386 DADMHC010000000
VERSION     DADMHC010000386.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.389"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..>1009
                     /locus_tag="JNZ57_004176"
     CDS             <1..>1009
                     /locus_tag="JNZ57_004176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000015031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HAY8830143.1"
                     /translation="DEGHRLAALWQALPEELRLSPHRYLATNSPQGPWWLLGWCERVP
                     EADEVLPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDGAGRHFQLVLTT
                     QAQRAEEARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDPEYPENLPAA
                     PLVRYGWTPRGELAAVYDRSNTQVRSFTYDDKYRGRMVAHRHTGRPEIRYRYDSDGRV
                     TEQLNPAGLSYTYQYEKDRITITDSLNRREVLHTQGEAGLKRVVKNHPETEALLWQHE
                     TRHAYNAQGLANRCIPDSLPAVEWLTYGSGWLAGMKLGDTPLVDFTRDRLHRETLRRF
                     GR"
BASE COUNT          203 a          309 c          339 g          158 t
ORIGIN      
        1 tggatgaagg tcaccggctg gccgcactct ggcaggcgct gccggaagaa ctccgcttaa
       61 gtccgcatcg ttatctggcg acaaacagtc cgcaggggcc gtggtggctg ctcggctggt
      121 gtgagcgggt gccggaagcg gatgaggtgc tgcctgcgcc gctgccgccg taccgggtac
      181 tgaccgggct ggtggaccgc ttcgggcgca cacagacgtt ccaccgcgaa gccgccggtg
      241 aattcagcgg cgaaatcacc ggcgtgacgg atggtgccgg gcgtcacttc caactggtac
      301 tgaccacgca ggcgcagcgg gcagaagaag cccggcagca ggccatttcc ggcgggacgg
      361 aaccgtccgc ttttcctgat accctgccgg gttacaccga atatggccgg gacaacggca
      421 tccgtctgtc tgccgtgtgg ctgacgcacg acccggaata cccggagaat ttacctgccg
      481 cgccgctggt gcgctatggc tggacgccgc gcggcgaact ggcggcagtg tatgaccgca
      541 gcaatacaca ggtgcgtagc tttacttacg atgataaata ccggggccgg atggtggcgc
      601 accgtcacac gggccggccg gaaatccgtt accgttacga cagcgacggg cgggtgacag
      661 aacagcttaa cccggcaggc ttaagctaca cgtatcagta tgagaaggac cgcatcacca
      721 tcaccgacag cctgaaccgc cgtgaagtgc tgcacacgca gggtgaagcc gggctgaagc
      781 gggtggtgaa aaatcacccg gagacggaag cactgctctg gcagcatgag accagacatg
      841 cgtacaacgc gcagggactg gcgaaccgct gtataccgga cagcctgccc gccgtggaat
      901 ggctgaccta cggcagcggc tggctggcag gtatgaagct cggcgacaca ccgctggtgg
      961 atttcacccg cgaccgcctg caccgggaaa cgctgcgccg cttcggccg
//
LOCUS       DADMHC010000387          999 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.390, whole genome shotgun sequence.
ACCESSION   DADMHC010000387 DADMHC010000000
VERSION     DADMHC010000387.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 999)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 999)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.390"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(1..357)
                     /locus_tag="JNZ57_004177"
                     /pseudo
     CDS             complement(1..357)
                     /locus_tag="JNZ57_004177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310800.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
     gene            complement(357..560)
                     /locus_tag="JNZ57_004178"
     CDS             complement(357..560)
                     /locus_tag="JNZ57_004178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4224 domain-containing protein"
                     /protein_id="HAY8830144.1"
                     /translation="MSSLFLTEDELLILTGCKYASHQRKWLMENGLPFYTNRSGKPIV
                     SRDLFTCNKTLPPREVEPNFGAI"
     gene            complement(619..978)
                     /locus_tag="JNZ57_004179"
     CDS             complement(619..978)
                     /locus_tag="JNZ57_004179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309530.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exoribonuclease"
                     /protein_id="HAY8830145.1"
                     /translation="MTHPRQYGSCCTLTALLQLREFIDENSGEFFVQVWGNGTNFDNT
                     ILRRSYERQGIPCPWRYYNDRDVRTIVELGKAIDFDARTAIPFEGERHNALDDARYQA
                     KYVSAIWQKLIPSQADF"
BASE COUNT          240 a          226 c          227 g          306 t
ORIGIN      
        1 cccctctctt gtccatgtat cgacggatgt gttctggttt tatggaatct gccggcacct
       61 taccgaatac ggcaagcaac ttttttgatg ttgcagataa tctttttgtg ttcttggact
      121 gaggtcactg taataggcgc tggcgaggaa tttttcccac aagcgaccga atgtcattgc
      181 acgatcgcga ttatttacag tttcctcata ctttttccat aaagcagcta aaccatcctt
      241 gatggcggtt agtgttacag attcgctgga tgttggtttc catacataac tatatttatt
      301 tgggtataca tttggaggta atttttcgtg ttcaggattt ttccttcgtc ttcccatcag
      361 atcgcaccaa aattcggctc tacctcgcgt ggtggtaaag ttttattgca ggtaaataga
      421 tcccggctga caatcggttt gccactacga ttggtataga acggaagccc gttttccatt
      481 aaccattttc gctggtggct tgcatatttg cagcccgtta atattagcaa ttcatcttcg
      541 gttaaaaata agctgctcat agctatatct cataaccgcc gctaactata tacggttagc
      601 ggcaattagg gttgaacatt aaaaatcagc ctgactcggg atcagttttt gccagatagc
      661 tgaaacgtat tttgcctggt aacgagcgtc atcaagtgca ttatggcgct caccttcgaa
      721 tggaatagcc gttctggcat cgaagtctat ggctttcccc agctcaacga ttgtgcgtac
      781 atcgcgatcg ttgtagtaac gccacgggca ggggatcccc tgccgttcgt atgaacggcg
      841 caaaatcgtg ttgtcgaagt tggttccatt tccccagacc tgaacaaaaa attcaccgga
      901 gttttcgtcg ataaattccc gcaattgtaa cagtgcagta agcgtgcagc aagaaccgta
      961 ttgacgggga tgtgttattc agtcggcagt gctacgcgc
//
LOCUS       DADMHC010000388          984 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.391, whole genome shotgun sequence.
ACCESSION   DADMHC010000388 DADMHC010000000
VERSION     DADMHC010000388.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 984)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 984)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.391"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..741
                     /locus_tag="JNZ57_004180"
     CDS             <1..741
                     /locus_tag="JNZ57_004180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001063816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110-like element ISSso6 family transposase"
                     /protein_id="HAY8830146.1"
                     /translation="DLARAWASARDDLRHARQRLKSFLLVHGVHYVGRADWGPAHRRW
                     LSKYSFESPWRQLAFDEHRRTIEDRQAQCERLESALKEAVTEWRLYPVVEALQAMRGI
                     QFITAVGLISELGDLTRFEHPRQLMSWFGITPSEYSSGGSRHQGSITKAGNSYARKLL
                     VEAAWSYRHPARISPAIQKRQENLPRPVIDRAWDAQLRLCKRYRKLQAKGKNVNITIV
                     AVARELAGFIWDMGRIAMSVAQQPQCHK"
BASE COUNT          275 a          232 c          261 g          216 t
ORIGIN      
        1 gatttggccc gggcatgggc atctgcccgc gatgatttac ggcatgcaag gcaacgtctg
       61 aaatcgtttc ttctggttca tggggtccat tatgtcgggc gagcagattg gggccctgca
      121 caccgacgct ggctcagcaa atactcattc gaaagtccct ggcgacaatt agcttttgac
      181 gaacaccgtc gtacaataga agaccggcag gcacaatgtg aacggctgga atccgccctg
      241 aaggaggccg ttaccgaatg gaggctgtat ccggtagtag aggcgctgca agccatgcga
      301 gggattcagt ttattactgc ggttggatta atttctgaac tgggtgatct gacccgtttt
      361 gaacatccac gacaactgat gtcatggttt ggtatcacgc catcagaata ttcatcgggt
      421 ggaagcagac atcagggcag cattaccaaa gccggaaaca gctatgccag aaagctattg
      481 gtcgaggcag cgtggagtta ccgtcatccg gcacgcatca gtccggcaat acaaaaaagg
      541 caggaaaatt taccccgccc cgtcattgac agagcatggg atgctcaact caggctttgt
      601 aagaggtatc gaaaacttca ggccaaagga aagaatgtca atattacaat tgttgctgtt
      661 gcacgtgagc tggcgggttt tatctgggat atgggccgaa tagcaatgtc tgtcgcacaa
      721 caaccacaat gtcacaaata aaaaatgaga ataaccagtt ccctgaaggc gacgtagccc
      781 ggtacaagag taacccacgt tagcgcttgg cgacggcgga acaaagctga ttcgcgacgt
      841 aagaaagtgg caggctcata tgacggacct ctgtaatgcg gtatccaacc cgcgaatatc
      901 agcgtgattc accgtcggat ttactgctac gtcgccctca gggaattaaa cctaaaaaga
      961 aaatcgtcaa aattagagat tccg
//
LOCUS       DADMHC010000389          980 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.392, whole genome shotgun sequence.
ACCESSION   DADMHC010000389 DADMHC010000000
VERSION     DADMHC010000389.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 980)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 980)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.392"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(1..980)
                     /locus_tag="JNZ57_004181"
                     /pseudo
     CDS             complement(1..980)
                     /locus_tag="JNZ57_004181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001493460.1"
                     /note="internal stop; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="PstS family phosphate ABC transporter
                     substrate-binding protein"
BASE COUNT          265 a          255 c          230 g          230 t
ORIGIN      
        1 tgccacttct gtttcctgcg gcgagatcat gcggacattt ttcatgacct gggattgcat
       61 caccgtctgg ctaccagagt cttccgggcg ttgctaggtc tggatctcct gatcgttacc
      121 gccaacagta cgccagttgg taattgcacc actgaagatg tcacgcacct gttgttcagt
      181 cagggaatta accggattat ccgcattgac gatgaaaaca aacgcttcac gggcaaaagg
      241 cgtgtacagc aaagtaatgc ccgattcctc agcgcgtttt ttctgcccac cggaaggttg
      301 cgccacaaaa ataatatcag catcaccttt aacaatcctg ttatacgcat cgggggtacg
      361 agagctctcc ggatattccc tggtgtgaaa atcttccggt ataacgctta aagcataaaa
      421 tgcagaggca taaattgggt acgccgccgt agcaccatcg agtcgcagcc agttttgcgt
      481 aaactgaatt tgcggtttac cacgcagtgg tgtcagttga ttattgagtt tatcgggtcg
      541 ccaggcccag gtatcaatat tttcgcgcac accgacgccg ggattgagct gtttatataa
      601 ataaccctga taaccagcga caaaaccaag catgagaagg ataaacagga gggaattacg
      661 gcaacgtagc ccggatgtac cggttaaagg atgtctggtt ggccggccgt accccagcga
      721 aaaactgata tgcgcgccaa cgggtataat gactatccac cagtactcac ctccgactac
      781 tgagactaac aaaacgccca gccaggggag cataagatca gccaaccaac ccgatcccat
      841 ctggtgaaat tgataatctg ccagatgcag cgcgattatc cagccaacca ggattaataa
      901 accgggtact aaaaaaagac attgtcgcca gacggctatt tctctttttt ctggtgcact
      961 atcgcctgcc catactcgcc
//
LOCUS       DADMHC010000390          967 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.393, whole genome shotgun sequence.
ACCESSION   DADMHC010000390 DADMHC010000000
VERSION     DADMHC010000390.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 967)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 967)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.393"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            1..484
                     /locus_tag="JNZ57_004182"
                     /pseudo
     CDS             1..484
                     /locus_tag="JNZ57_004182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000225871.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
     gene            514..>967
                     /locus_tag="JNZ57_004183"
     CDS             514..>967
                     /locus_tag="JNZ57_004183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000755097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8830147.1"
                     /translation="MKKVFAKSLLVAAMFSVAGSALAVQKDITVTANVDAALDMTQTD
                     NTALPKAVEMQYLPGQGLQSYQLMTKIWSNDVTKDVKMQLVSPAQLVQSLDASKIVPL
                     TVTWGGEEIKADAATTFTATKIFASDALTNGSLAKNLMFAQTTKGVLET"
BASE COUNT          314 a          190 c          210 g          253 t
ORIGIN      
        1 cggtgatgca aatcatctgg ttgttatgcc acctaaattc gctttaccag ccggtagtag
       61 caaaactgtg cgctttgttg caatggaacc agagcaaaaa gaaaaaaatt aacgcgttaa
      121 atttgaagcg gttcccagta ttgatgacgt tgccacagat aaaaaagatt tctctatgca
      181 gttaacagtt agcttaattt gggggattgt tgttagtgtt ccacctcagc aacctattgc
      241 taagttagaa gtaaatgctg cccaaaaatt agttaatgca gggaatcaac gcttaaagat
      301 tttaacgatc gcttattgta aaaataatag caaagaaaat tgtaagatac agaccgtaaa
      361 taaaaacatc ttccctggtc aggaaagaaa tcttgaaagc atatctggct acgacaaaat
      421 cgttgtcaaa tataataact ggatcaccaa agataatggc gagtttgaac tggcggtcca
      481 ttaattatca ttgtaataaa cgaaggaata gtaatgaaaa aggtatttgc aaaatctctt
      541 ctggtcgcag cgatgttttc tgttgcaggc tccgcattgg cagtacaaaa ggatattact
      601 gtaacggcca acgttgatgc cgctctggat atgacacaga ccgataacac cgcgttgccg
      661 aaagcagtag aaatgcaata tctgccgggg cagggtctgc aatcttacca gttgatgacc
      721 aaaatctggt ctaacgacgt taccaaagat gtaaaaatgc agttagtttc cccggcgcaa
      781 ctggttcaaa gcctggatgc tagcaagatt gttccgctga cagtaacctg gggcggtgaa
      841 gaaattaaag ctgatgcggc aaccactttt accgcaacca aaatctttgc ttccgatgcg
      901 ttaactaacg gttctctggc taaaaacctg atgtttgctc aaaccaccaa aggtgttctg
      961 gagacag
//
LOCUS       DADMHC010000391          965 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.394, whole genome shotgun sequence.
ACCESSION   DADMHC010000391 DADMHC010000000
VERSION     DADMHC010000391.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 965)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 965)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.394"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..>965
                     /locus_tag="JNZ57_004184"
     CDS             <1..>965
                     /locus_tag="JNZ57_004184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000015067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HAY8830148.1"
                     /translation="QLQSQHLNSLQYDRDYTWNDNGELIRISSPRQTRSYSYSTTGRL
                     TGVHTTAANLDIRIPYATDPAGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRHG
                     RLTEKTDLIPEGGIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRV
                     AKRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTTIQNDRSRIQTIYQPGSFTPLIRV
                     ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR
                     WLASCGLTVAQMQSQMDPVYTPARKIHLYHCDHRGLPLALISTEGA"
BASE COUNT          218 a          310 c          297 g          140 t
ORIGIN      
        1 cagttacaga gccagcacct gaacagcctg cagtatgacc gcgattacac ctggaacgac
       61 aacggcgaac tcatccgcat cagcagcccg cgccagaccc ggagttacag ctacagcacc
      121 accggcaggc tgaccggcgt tcacaccacc gcagcgaacc ttgatatccg catcccgtat
      181 gccacagacc cggcaggtaa ccgcctgccc gacccggagc tgcacccgga cagcaccctc
      241 agcatgtggc cggataaccg tatcgcccgt gacgcgcact atctttaccg gtatgaccgt
      301 cacggcaggc tgacagagaa aaccgacctc atcccggaag ggggtatccg cacggatgat
      361 gagcgcaccc accggtacca ttacgacagt cagcaccggc tggtgcacta cacgcggaca
      421 caatatgcag agccgctggt cgaaagtcgc tatctttacg acccgctggg ccgcagggtg
      481 gcaaaacggg tgtggcggcg tgaacgtgac ctgacgggct ggatgtcgct gtcacggaaa
      541 ccggaagtga cctggtacgg ctgggacggc gaccggctga ccacaataca gaacgacagg
      601 agccgcatcc agacgattta tcagccgggg agcttcacgc cactcatcag agttgaaacc
      661 gccaccggtg agctggcgaa aacgcagcgc cgcagcctgg cggataccct tcagcagtcc
      721 ggcggcgaag acggtggcag tgtggtgttc ccgccggtgc tggtgcagat gctcgaccgg
      781 ctggaaagtg aaatcctggc tgaccgggtg agtgaggaaa gccgccgctg gctggcatcg
      841 tgcggcctga cggtggcgca gatgcaaagc cagatggacc cggtgtacac gccggcgcga
      901 aaaatccacc tgtaccactg cgaccatcgc ggcctgccgc tggcgctcat cagcacggaa
      961 ggggc
//
LOCUS       DADMHC010000392          946 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.395, whole genome shotgun sequence.
ACCESSION   DADMHC010000392 DADMHC010000000
VERSION     DADMHC010000392.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 946)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 946)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.395"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            121..946
                     /locus_tag="JNZ57_004185"
                     /pseudo
     CDS             121..946
                     /locus_tag="JNZ57_004185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416847.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          356 a          164 c          168 g          258 t
ORIGIN      
        1 gctattgtgc gctcatacac tcaaattaaa gataggttct aaataaatga gcgttttttg
       61 atagtctatt tcattaggta atatatattt gtaacaaatc aatcaaaatg gaataaaatc
      121 atgctaccat ctatttcaat caacaatacc agcgcaactt acccagaatc cattaatgaa
      181 aataacaatg atgaagttaa tggattagta caagagctca aaaacctttt taatggtaag
      241 gaaggaataa gcacctgtat taaacatcta cttgagctta taaaaaacgc catatgagta
      301 aacgacgatc cttatagatt taatattaat aattcctcag ttacttatat tgatattggc
      361 tccaatgata cagaccatat tactattggt atcgacaacc aagaaccaat agaattacct
      421 gcgaactata aagacaaaga actcgtccgt actatcatta atgacaacat agttgagaag
      481 actcatgata tcaataacaa ggaaatgatc ttcagcgcat taaaagaaat atatgatgga
      541 gatcctagtt ttatcttcga taagatatca cacaaactca gacatacggt aacggaattt
      601 gatgagagcg ggaaaagcga accaacggac ttatttacct ggtacggtaa agataaaaaa
      661 ggcgactctc tcgctattgt aattaaaaat aaaaacggaa atgattactt atctctcggt
      721 tactacgatc aggacgacta ccacattcaa agaggaattc gtattaatgg tgatagtctc
      781 acccaatatt gtagtgaaaa cgccaggagt gcttcagcgt ggtttgaaag cagtaaagct
      841 atcatggcag aatcatttgc aacaggttcc gatcatcagg ttgtaaacga gctcaacggg
      901 gaaagactga gagaacctaa cgaagttttt aaacgtttag gtcgag
//
LOCUS       DADMHC010000393          922 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.396, whole genome shotgun sequence.
ACCESSION   DADMHC010000393 DADMHC010000000
VERSION     DADMHC010000393.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 922)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 922)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.396"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..297
                     /locus_tag="JNZ57_004186"
     CDS             <1..297
                     /locus_tag="JNZ57_004186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8830149.1"
                     /translation="ANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVRARTGEW
                     EEDLLLGLISDEDKEKLKACRIYAKSLQAMDFSTITDKATYNAINWPERPDAAA"
     gene            284..>922
                     /locus_tag="JNZ57_004187"
     CDS             284..>922
                     /locus_tag="JNZ57_004187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001135852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8830150.1"
                     /translation="MPQLKGVIKTPTGEPLDGATITLTSIHNRAGILKSVFSHVTTQN
                     GEYDFPVLPGVYSVRLTQSTRRLSEIGVIRVYEDSTDGSLNDFLGATNIDLRPESLKK
                     FEELAQQAQQSAGSAAGNARQTAQDVTAAATARDDAQRFAEKARQDATVTAENRKATA
                     EDVTSTGANAAAAGQSAQDAAGYARAAEQAKNDIDAALTGTLKMANHLSEIAA"
BASE COUNT          257 a          245 c          259 g          161 t
ORIGIN      
        1 gccaaccgcc gcattaccgc gccgggttac tggttttacc gcaatgatga atttgtcttt
       61 gactacagac tcaaagcgga agatgagcgt gatgcccttc tggctcaggt cagagcccgg
      121 acaggggaat gggaagaaga cctgctgctg gggttaatca gcgacgaaga taaagaaaag
      181 ctgaaagcct gtcgtattta cgcgaaatcg ctgcaggcga tggatttcag caccatcaca
      241 gataaagcca catataacgc catcaactgg ccggagcgtc ccgatgccgc agcttaaagg
      301 tgtgattaaa acgcccacgg gagaaccgct ggacggcgca accattacac taacctccat
      361 acacaaccgt gcagggattc tgaaaagtgt tttcagccat gtcaccacac agaacgggga
      421 atatgacttc cccgttctgc cgggtgtgta cagcgttcgc ctgacacaaa gcacacggcg
      481 cctttcagaa atcggtgtca tccgcgttta tgaagattca acggacggtt cgctgaatga
      541 ttttctgggc gcaactaata ttgacctgcg tccggaatcc ctgaagaaat tcgaagagct
      601 ggcgcaacag gcgcagcaga gtgccgggag cgcagccgga aacgcacggc agacggcgca
      661 ggatgtgacg gcagccgcaa cggcccgtga tgatgcacaa cgttttgcgg agaaagcccg
      721 acaggatgca accgtcacag ctgagaacag aaaggccact gcggaagatg tgacaagcac
      781 aggagcaaat gcagccgcag ccggacagag cgcacaggat gccgcaggtt atgcccgcgc
      841 agcagaacag gccaaaaatg acattgatgc tgcgctgacc ggcactctga aaatggctaa
      901 ccatctgtca gaaatcgcag ca
//
LOCUS       DADMHC010000394          908 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.397, whole genome shotgun sequence.
ACCESSION   DADMHC010000394 DADMHC010000000
VERSION     DADMHC010000394.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 908)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 908)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..908
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.397"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(95..481)
                     /locus_tag="JNZ57_004188"
     CDS             complement(95..481)
                     /locus_tag="JNZ57_004188"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830151.1"
                     /translation="MWNDIFTKLSIAILLAFSAYVHAETSAPIFFEDVGSIDSWFSIK
                     YQKYENVKDEQYPEILIYYGVKGSGINRVDGWFFSCAKAGRTCSLIFMADFGESRYFK
                     PAKIAMNKNNLIIRTSDVEIAFKITK"
     gene            complement(454..>908)
                     /locus_tag="JNZ57_004189"
     CDS             complement(454..>908)
                     /locus_tag="JNZ57_004189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000015366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HAY8830152.1"
                     /translation="LGLIDKPAPVFNRDLNSDPYYLAVNNCYSYALNRYGNPGSRIFG
                     GGGLQPGELSGKEFSKLTCGSIFEASKNDGAKDLDNGSCPSGYHKAQLFIRPHNFIGM
                     GGDYHWYRQDANGEWSDKQGVGAIRFRGKDPFPPIDYPEKCGTIFLPN"
BASE COUNT          291 a          198 c          125 g          294 t
ORIGIN      
        1 aagcttaatt acctcactat taattgtatt tcaaactaac aatcgcactc cattttctca
       61 ttttaaaaaa cataaacact gttaaaacaa atatttattt cgttatctta aatgctattt
      121 ctacatcact cgtccttata atcaaattat tcttattcat agctattttt gcaggtttaa
      181 aatagcggct ttcaccaaag tcagccatga aaattagact acaagttctc ccagcctttg
      241 cacatgagaa aaaccaccca tcaactctat ttattcctga acctttaaca ccataataaa
      301 tcagaatttc tgggtattgt tcatccttca cgttttcata tttttggtat ttaattgaaa
      361 accaagagtc tatactgcca acatcttcaa aaaatattgg agctgatgtt tccgcatgaa
      421 catatgcaga aaatgctaac aaaatggcaa tacttagttt ggtaaaaata tcgttccaca
      481 cttttcagga taatctattg gggggaaggg atcttttcct ctaaatctaa ttgctcccac
      541 tccttgtttg tcagaccatt cgccatttgc atcctgacga taccagtgat aatcccctcc
      601 catgcctata aaattgtgag gacgaataaa caattgagct ttatggtaac cagatggaca
      661 actcccatta tctaaatcct tggcaccatc attttttgac gcttcaaaaa tactaccgca
      721 agtgagttta gaaaactctt ttccagataa ttctccaggt tgtaatcctc cgccgccaaa
      781 aatcctactc ccagggtttc catacctatt tagagcatat gaataacaat tatttacggc
      841 aagataatac ggatctgaat ttaggtctcg attgaatact ggagcaggtt tatcaattaa
      901 gcccagcg
//
LOCUS       DADMHC010000395          903 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.398, whole genome shotgun sequence.
ACCESSION   DADMHC010000395 DADMHC010000000
VERSION     DADMHC010000395.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 903)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 903)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.398"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(73..149)
                     /locus_tag="JNZ57_004190"
     tRNA            complement(73..149)
                     /locus_tag="JNZ57_004190"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(113..115),aa:Ile,seq:cat)
     gene            complement(339..893)
                     /locus_tag="JNZ57_004191"
     CDS             complement(339..893)
                     /locus_tag="JNZ57_004191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1133 family protein"
                     /protein_id="HAY8830153.1"
                     /translation="MIYPTNTGKSGEHLRLTTLESVWIQGKLRMWGRWSYIGGGKTGN
                     MFNQLLASKKLTKTAINEALRRMKKAGLNKSELEAFLRDMINGKQKSWLAHCTDAEAL
                     CIDRVISEVLAEHPGLISVLRQRYEGRGMTKRKMAELLNDAHPKWSLRTCERRIEHWL
                     KVAEFILYKPMVMAFGIEKKVIAF"
BASE COUNT          223 a          253 c          178 g          249 t
ORIGIN      
        1 accaccgagg actcgaacct cgcaccgtca acttagaagg ttgatgctct atccggatga
       61 gctagtggtg gttggtggcc cttgctggac ttgaaccagc gacctggcga ttatgagtcg
      121 ctcgctctga ccaactgagc taaagggccg gaggcagaat aataaccata tgtcatcaca
      181 tctgcaaact catctgacca ccagcacgtt taacgtcctg tgccgttttt caggtataaa
      241 aaaacccgca taaagcgggc tctttcaaat gtccatgtct gctattcgcc tcgcggtaca
      301 gctttgcgaa gcgtacaaga attgaagcag tttttacgtc aaaaagcaat aacttttttc
      361 tctataccaa aagccataac cattggtttg tacaaaataa attctgccac ctttagccaa
      421 tgctcaatgc gtctttcaca ggttcttaaa ctccatttcg ggtgtgcatc attcagcagt
      481 tcagccattt tgcgtttggt catcccccgc ccctcatacc gttgccgaag gacgctaatc
      541 aatcctggat gctctgccag cacctcactt atgacccgat caatacataa cgcctctgca
      601 tcagtacaat gcgccagcca gctcttttgc ttaccgttaa tcatatcccg caaaaaagcc
      661 tcaagttcag acttgttcag acctgctttt ttcatcctcc ggagcgcctc gttaattgcc
      721 gtttttgtca gctttttaga ggccaacaac tggttgaaca tattccccgt cttaccgccg
      781 ccaatatacg accagcgccc ccacatgcgc agttttccct gaatccagac actttccagc
      841 gtggtgagac gaaggtgttc cccgcttttg cctgtatttg ttgggtaaat cataaataac
      901 ctt
//
LOCUS       DADMHC010000396          895 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.399, whole genome shotgun sequence.
ACCESSION   DADMHC010000396 DADMHC010000000
VERSION     DADMHC010000396.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 895)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 895)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..895
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.399"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(348..614)
                     /locus_tag="JNZ57_004192"
     CDS             complement(348..614)
                     /locus_tag="JNZ57_004192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000957717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830154.1"
                     /translation="MLTQTIFPCLPQKQENIILEVSNPVLLSSTVTTDGYTVFNKKAA
                     IYELQIPAANRTKTLKFTATEMQWLTKINEVGIVEKQSQRHSNI"
     gene            complement(796..>895)
                     /locus_tag="JNZ57_004193"
     CDS             complement(796..>895)
                     /locus_tag="JNZ57_004193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8830155.1"
                     /translation="AVAIEHYNENHPHSALGYLSPREYRRQRVMST"
BASE COUNT          257 a          157 c          171 g          310 t
ORIGIN      
        1 ccccccccaa agccgtctat gggaaggagt ctgctgttat tccagagaat ggtaattcag
       61 tcatatattt ctccatctat gacttgtcaa taccatcctg atatttgtgg gtcagcaata
      121 tattctacta aaaggtattt aaggtcattg cgtccctgca ctcgaataat ggtgaagaaa
      181 gcatgatgaa tatatcacga taacgttcag tatgtatcga ggatagatgg agttactcct
      241 ctctgaaata gaattactgc tctacttttt ctgtttccag aaattattag taacaaaccc
      301 tgatatattc ttttgaaaat ggagcttaaa cgagtctgaa attaacttca gatattagaa
      361 tgccgttggc tttgtttttc aacaattcct acttcattta tctttgtcaa ccattgcatt
      421 tctgtagcag tgaatttcaa cgttttcgtc cggttggcag caggtatttg taattcgtat
      481 atagctgctt ttttattgaa aacagtatat ccatctgtag taacagtaga agataataat
      541 acaggatttg acacttcaag gatgatattt tcttgttttt gtggaaggca agggaatata
      601 gtttgtgtaa gcatattgct tccttatgtt atattttagt aaagaattta ttttttacat
      661 tatagtcggc taaatgaagt ttactgtaaa aaaacgatac ttttttcgta agcgatgaga
      721 tgtggagcca gaaaaatggc tgcgttatgt cattgaactg tccttgaccc acgatattca
      781 gacagtcgtt gtatcttaag ttgacattac ccgctgacgt cgatattccc ttggtgagag
      841 ataacccaac gcactatgcg gatggttttc attgtaatgc tcgatcgcca ctgca
//
LOCUS       DADMHC010000397          866 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.400, whole genome shotgun sequence.
ACCESSION   DADMHC010000397 DADMHC010000000
VERSION     DADMHC010000397.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 866)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 866)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.400"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..827)
                     /locus_tag="JNZ57_004194"
     CDS             complement(<1..827)
                     /locus_tag="JNZ57_004194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HAY8830156.1"
                     /translation="MDALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHAL
                     TQGAAKLEMPTGEIFTLRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHSARYFL
                     TSLPETLFLAPVNHSVEYNWLREAIPFLQQESRSAMPGVDALCSQICATFFTLAVREW
                     IAQVNTEKNILSLLLHPRLGAVIQQMLEMLGHAWTVESLASIAHMSRASFAQLFRDVS
                     GTTPLAVLTKLRLQIAAQMFSRETLPVVVIAESVGYASESSFHKAFVREFGCTPGEYR
                     "
BASE COUNT          233 a          233 c          202 g          198 t
ORIGIN      
        1 cgatattctc ccggagtaca accaaactcg cggacaaacg ccttgtgaaa agatgattcg
       61 ctggcatagc ctactgactc agcgatcacc acaacaggga gcgtttcccg ggaaaacatc
      121 tgggccgcta tttgtagacg caactttgtt aatacagcca gcggcgtggt tccggaaaca
      181 tcacggaaaa gctgggcaaa acttgcccgg gacatgtggg cgatgctggc cagcgattcg
      241 acggtccagg cgtgtcctag catttccagc atttgctgta ttaccgcacc aagacgtgga
      301 tgcagaagca aactgagaat gtttttctct gtattaacct gtgcaatcca ctcacgcacc
      361 gcgagggtaa agaatgtagc gcagatctgg ctacacagtg catccactcc cggcatcgcc
      421 gatctggatt cctgttgtaa aaacgggatc gcctccctca gccagttata ttccacgctg
      481 tggttaaccg gtgctaaaaa cagcgtttcc ggcaaagacg ttaaaaaata acgcgccgaa
      541 tgttgcaacc gaagagtacc acagacaata caggtcgatt cattatcgac atgactcagg
      601 cgatgagctg aattttgtgg tagcaggacc acatttcccg ggcgtaatgt aaaaatctct
      661 cccgtcggca tttccagctt cgccgctcct tgcgttaacg catgccaacg aataaccgat
      721 aattccccgg caccatgtgg aagctgccag tcacttccta acacgcaatt cttatcgatc
      781 gttccttgtg gagcgttaag catcaacaaa cggctaaggg catccatatc agactcctga
      841 gtggtttttg attacaaaca ccaaca
//
LOCUS       DADMHC010000398          861 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.401, whole genome shotgun sequence.
ACCESSION   DADMHC010000398 DADMHC010000000
VERSION     DADMHC010000398.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 861)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 861)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.401"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..81
                     /locus_tag="JNZ57_004195"
     CDS             <1..81
                     /locus_tag="JNZ57_004195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
                     /protein_id="HAY8830157.1"
                     /translation="GKASSAKVHFYAINDFGGAIEGNASL"
     gene            116..861
                     /locus_tag="JNZ57_004196"
                     /pseudo
     CDS             116..861
                     /locus_tag="JNZ57_004196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414681.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus outer membrane usher protein"
BASE COUNT          263 a          174 c          178 g          246 t
ORIGIN      
        1 ggcaaagcaa gttctgcaaa agtacatttt tacgccatta atgattttgg tggcgccatt
       61 gaaggtaatg ccagtctgta atcaggcaag gatataattc cgcaggaagc ataacgtgac
      121 tataaaacca actaaaaatt atcataatca tctgacccgt atcgctacgt tttgcgcgct
      181 gctgtattgc aatagtgctt tctgtgctga acttgttgaa tatgaccata ccttcctgat
      241 ggggcagaat gcctcaaata ttgatctcag ccggtatagt gaaggtaacc ctgctatacc
      301 gggtatgtac gacgtcagtg tttatgtcaa cgatcaacct attattaacc aaagcattac
      361 atttattgaa attgaaggaa aaaaaacgca caagcctgta tcacacttaa gaatttattg
      421 cagtttcata taaattctcc cgatataaat aacaaaaaag ccgttctgct tgccagggat
      481 gaaacactcg gcaattgcct taatttgacg gaaattatcc ctcagacttc tgttcgttat
      541 gacgttaacg agcaacgtct ggatatagac gttcctcagg catgggtaat gaaaaattac
      601 caaaactatg ttgatccagc gttatgggaa aatggcatta atgcggccat gttgtcatac
      661 aacctcaacg gatatcatag tgaaactcct ggtcgaagaa atgacagcat ttatgctgct
      721 tttaacggtg ggatgaattt aggtgcatgg cgactgcgtg cctcaggcaa ctacaactgg
      781 atgaccgatt ctggcagtaa ttatgatttt aagaatcggt atatacagcg tgatatcgcc
      841 tcgctgcgtt ctcaactcat t
//
LOCUS       DADMHC010000399          856 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.402, whole genome shotgun sequence.
ACCESSION   DADMHC010000399 DADMHC010000000
VERSION     DADMHC010000399.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 856)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 856)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.402"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(43..118)
                     /locus_tag="JNZ57_004197"
     tRNA            complement(43..118)
                     /locus_tag="JNZ57_004197"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(81..83),aa:Arg,seq:tcg)
     gene            complement(128..200)
                     /locus_tag="JNZ57_004198"
     tRNA            complement(128..200)
                     /locus_tag="JNZ57_004198"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(165..167),aa:Ile,seq:cat)
     gene            complement(250..>856)
                     /locus_tag="JNZ57_004199"
     CDS             complement(250..>856)
                     /locus_tag="JNZ57_004199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HAY8830158.1"
                     /translation="AKGRALKQHVMAPLISYFRDACAALGITAKQIADATGKKNMVSH
                     WFSASQWQLPNESDYLKLQALFARVAEEKHQRGELEKPHHQLVDTYTSLNRQYAELQS
                     EYKHLRRYFGVTAQVPYTDVWTHKPVQFYPGKHPCEKPAEMLQQIISASSRPGDLVAD
                     FFMGSGSTVKAALALGRRAIGVELETGRFEQTVREVQDLIV"
BASE COUNT          186 a          257 c          197 g          216 t
ORIGIN      
        1 tgctctgtcc ggctgagcta acaacgcagg atacagataa tgaaccgcct tcggggaccc
       61 gaactccgcg caaccagctt cgaaggctgg cgctctttcc tgatgagcta atggcggtat
      121 gtgatagtgg cccttgctgg atttgaacca gcgacctggc gattatgagt cgctcgctct
      181 caccactgag ctaaagggcc gggagcagaa taataatggt gcgtaattaa ttctgcaatc
      241 tcatccgttt caaacgatta aatcctgaac ttccctgact gtctgctcaa aacgtcctgt
      301 ctccagttca acgccaatcg cacgacgccc gagcgccagt gccgctttta ccgttgaacc
      361 cgaccccatg aaaaaatccg caaccagatc accaggacga ctacttgcgc tgattatctg
      421 ctgcagcatt tctgccggtt tttcgcacgg atgtttcccg ggatagaact gcaccggttt
      481 atgtgtccac acatccgtgt acggcacctg cgccgtcaca ccaaaatacc gccgcagatg
      541 tttatattca ctctgcagct ccgcatactg tcggttcagt gaagtatacg tatccaccag
      601 ctggtggtgg ggcttttcca gttccccccg ctgatgcttc tcttctgcca ccctggcaaa
      661 cagtgcctgt aatttcagat aatcgctttc gttcggcaac tgccactgac tggcactgaa
      721 ccagtgcgac accatgtttt tctttcctgt ggcatctgca atctgttttg ccgttatccc
      781 cagggccgcg catgcatcac gaaagtaaga aatcagcggg gccatcacat gctgtttcag
      841 tgccctgccc ttcgcc
//
LOCUS       DADMHC010000400          848 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.403, whole genome shotgun sequence.
ACCESSION   DADMHC010000400 DADMHC010000000
VERSION     DADMHC010000400.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 848)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 848)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.403"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..>848
                     /locus_tag="JNZ57_004200"
     CDS             <1..>848
                     /locus_tag="JNZ57_004200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000633896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 13 protein"
                     /protein_id="HAY8830159.1"
                     /translation="DYLEDLGINGIYFCPIFTSASNHKYDTIDHFSVDPHLGGNIAFH
                     TLIEEAHKRGIKIMLDAVFNHLGADSPIWLDVVRNGANSRYADWFWIHKLPVYPDTPK
                     SEWDFKNFNYETFGNVIEIPKLNTENEECREYLLSIVRYWTQNFDIDGWRLDVANEVD
                     HHFWRDFRKVIKDIKPECYILSEIWHEGTPWLRGDQFDSLMNYPLTYGIIDYFALQDT
                     TKQEFMTSVTRSYLCYPKNITEVMFNLLDSHDTARILSVCLNDKRKVKLAYLFMLTQA
                     GSPCIY"
BASE COUNT          249 a          139 c          169 g          291 t
ORIGIN      
        1 cgattatctg gaagatctgg gtattaatgg gatttatttt tgtcctattt ttacctcagc
       61 atccaaccat aaatatgaca ccatcgatca ttttagtgtt gatccacatt taggtgggaa
      121 tattgctttc catactttga ttgaagaagc gcataagcgt ggaataaaaa tcatgttgga
      181 tgcagtattc aatcatttag gcgctgactc tccaatatgg cttgacgttg tacgcaatgg
      241 tgccaattca cgttacgccg attggttctg gattcataaa ttgcctgttt atcccgatac
      301 tccaaaaagt gaatgggatt ttaaaaactt taactatgaa acctttggca atgttattga
      361 aatacctaag ctaaatactg agaatgaaga gtgccgtgaa tacttactta gtatagttcg
      421 ctattggacg caaaattttg atattgatgg ttggcgtctg gatgttgcga atgaagtgga
      481 tcatcatttc tggcgagatt tcagaaaggt gattaaagat atcaaacctg aatgttatat
      541 tttgagtgag atatggcatg agggcacccc ctggttgcgt ggtgatcagt ttgattcatt
      601 aatgaattat cccttaacat atgggattat tgattatttt gcgttacagg atacaacaaa
      661 acaagaattt atgacatccg ttacacgttc ttatctttgt tatcctaaaa atataactga
      721 agttatgttt aatcttctgg atagtcatga caccgcgcgt attttaagcg tttgtttgaa
      781 tgataaacga aaagttaaac tcgcctattt atttatgtta actcaagcgg gctctccttg
      841 tatctact
//
LOCUS       DADMHC010000401          836 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.404, whole genome shotgun sequence.
ACCESSION   DADMHC010000401 DADMHC010000000
VERSION     DADMHC010000401.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 836)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 836)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..836
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.404"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..>836
                     /locus_tag="JNZ57_004201"
     CDS             <1..>836
                     /locus_tag="JNZ57_004201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416329.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HAY8830160.1"
                     /translation="LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQC
                     IGVEILLRWNNPRQGRISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHV
                     GINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVK
                     LAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIEL
                     VAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIM
                     PL"
BASE COUNT          193 a          213 c          216 g          214 t
ORIGIN      
        1 actggtgggc tacatcgcct ggctggcgac cgcttaccgg atgagctttt cccgcgaaat
       61 caatctgggc ctggcgcaac atgagttcga attgttctgt cagcctttgc ttaatgcgcg
      121 cagccagcaa tgtattggtg tagagatttt gctgcgctgg aacaatccgc gtcagggccg
      181 gatttcaccg gatgtgttta ttcctatcgc ggaagaacat catttaattg tgccactgac
      241 ccgctatgtg atggcagaaa ccattcgtca gcgccatgtt ttcccgatga gtagtcagtt
      301 tcatgttggc attaacgtcg cacccagcca ttttcgccgt ggtgtgctga taaaagatct
      361 caatcagtac tggtttagcg ctcacccgat tcagcaactg atcctcgaaa tcaccgaacg
      421 cgatgcctta ctggatgttg attatcggat tgcccgcgag ctacatcgta aaaacgtcaa
      481 actggcgatt gatgacttcg gcaccggcaa cagttcattt tcctggcttg aaacattacg
      541 tcctgacgtg ctgaaaattg ataagtcatt taccgcagct ataggttctg acgcggttaa
      601 ctcgacggtg accgatatca tcatcgcgct ggggcaaaga ctgaatattg aactggtggc
      661 ggagggcgtg gaaacgcaag aacaggcgaa gtatttgcgc cgtcatggcg tgcatatttt
      721 gcaagggtat ttgtacgcac agccgatgcc gctacgtgat tttcccaaat ggctggcggg
      781 cagccaaccg ccgcccgccc ggcataatgg acatatcacg cccattatgc cgttac
//
LOCUS       DADMHC010000402          827 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.405, whole genome shotgun sequence.
ACCESSION   DADMHC010000402 DADMHC010000000
VERSION     DADMHC010000402.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 827)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 827)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.405"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..346
                     /locus_tag="JNZ57_004202"
     CDS             <1..346
                     /locus_tag="JNZ57_004202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001613027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830161.1"
                     /translation="VMCLTKPAFSYYIAAYLKLFIENYYEADALVDTILNMLTPPVRN
                     GIPSTTWIAKNLDCFSRNKRVAISFTFQYLCNEYNDPNTEKALNIYWGQYLNESLLIK
                     NVQNSKNKCKSQ"
     gene            591..794
                     /locus_tag="JNZ57_004203"
     CDS             591..794
                     /locus_tag="JNZ57_004203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000977355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion protein Rhs"
                     /protein_id="HAY8830162.1"
                     /translation="MMKNQMEPEYTPLRKIHLYHCDHRGLPLALIRSDGRTGWRVEYD
                     EWGNLLSEDNPHRERSSEVHFLY"
BASE COUNT          259 a          169 c          190 g          209 t
ORIGIN      
        1 tgtcatgtgt ctcactaaac cagcattctc atattatatt gcagcctatt taaaactttt
       61 tattgaaaat tattacgaag ctgatgcttt agtggatact attttaaata tgctcactcc
      121 tcctgttagg aatggtatcc ccagcactac atggatagca aaaaatcttg attgctttag
      181 tcgtaataaa agggtggcta tttcttttac attccaatat ttatgtaatg aatataatga
      241 tccaaatact gaaaaggcgt taaatatata ttggggacag tatctgaatg aatcattgct
      301 tattaaaaat gtacagaact ctaaaaataa atgtaaatca cagtaagaca gaaccaagca
      361 gaaatcgtgg gcgtggttcg caccctgacg gagggtgtag cgtgtactag atcacagtga
      421 gcgacatcaa agcttggtca cgttctggca ttacgatgaa gccgaccgcc tgacgcaccg
      481 taccgtgaat gatgaagatg ccgagtgctg gcagtacaac gaacggggct agctgacgga
      541 aaaagacgag cagcgcatcc gtgacggcgg cagccacagc caccattatc atgatgaaaa
      601 accagatgga gccggaatac acgccgctgc gtaaaattca cctgtaccac tgcgaccacc
      661 ggggactgcc gctggcgctg atacgcagtg acggccgaac cggatggcgt gtagagtatg
      721 acgaatgggg caacctgctg agtgaggata acccgcacag ggaaagatca tcagaagttc
      781 actttttgta ctaaataatt cgcattttat gtttaaaaat tgagata
//
LOCUS       DADMHC010000403          814 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.406, whole genome shotgun sequence.
ACCESSION   DADMHC010000403 DADMHC010000000
VERSION     DADMHC010000403.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 814)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 814)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.406"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..>814
                     /gene="tuf"
                     /locus_tag="JNZ57_004204"
     CDS             <1..>814
                     /gene="tuf"
                     /locus_tag="JNZ57_004204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HAY8830163.1"
                     /translation="PMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVR
                     ELLSQYDFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLL
                     PIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRA
                     GENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRP
                     QFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGR"
BASE COUNT          190 a          202 c          233 g          189 t
ORIGIN      
        1 gcccgatgcc gcagactcgt gagcacatcc tgctgggtcg tcaggtaggc gttccgtaca
       61 tcatcgtgtt cctgaacaaa tgcgacatgg ttgatgacga agagctgctg gaactggttg
      121 aaatggaagt tcgtgaactt ctgtctcagt acgacttccc gggcgacgac actccgatcg
      181 ttcgtggttc tgctctgaaa gcgctggaag gcgacgcaga gtgggaagcg aaaatcctgg
      241 aactggctgg cttcctggat tcttacattc cggaaccaga gcgtgcgatt gacaagccgt
      301 tcctgctgcc gatcgaagac gtattctcca tctccggtcg tggtaccgtt gttaccggtc
      361 gtgtagaacg cggtatcatc aaagttggtg aagaagttga aatcgttggt atcaaagaga
      421 ctcagaagtc tacctgtact ggcgttgaaa tgttccgcaa actgctggac gaaggccgtg
      481 ctggtgagaa cgtaggtgtt ctgctgcgtg gtatcaaacg tgaagaaatc gaacgtggtc
      541 aggtactggc taagccgggc accatcaagc cgcacaccaa gttcgaatct gaagtgtaca
      601 ttctgtccaa agatgaaggc ggccgtcata ctccgttctt caaaggctac cgtccgcagt
      661 tctacttccg tactactgac gtgactggta ccatcgaact gccggaaggc gtagagatgg
      721 taatgccggg cgacaacatc aaaatggttg ttaccctgat ccacccgatc gcgatggacg
      781 acggtctgcg tttcgcaatc cgtgaaggcg gccg
//
LOCUS       DADMHC010000404          796 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.407, whole genome shotgun sequence.
ACCESSION   DADMHC010000404 DADMHC010000000
VERSION     DADMHC010000404.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 796)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 796)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.407"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            606..>796
                     /locus_tag="JNZ57_004205"
     CDS             606..>796
                     /locus_tag="JNZ57_004205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2686 family protein"
                     /protein_id="HAY8830164.1"
                     /translation="MSMPLSNALQSQIITDNHFLHHPKVDNKLTREYARMDTENIYLL
                     PLTRGNNHNYDGKSVVEIR"
BASE COUNT          285 a          145 c          105 g          261 t
ORIGIN      
        1 tgctcatttt ccatagccat tcccttttgt tcattacatc catgtcagtc tgagacaggc
       61 ctgaatcctg tcagcaaagt ataaaacctt acttgcctat gaatatctac tgacttttca
      121 ggaaaaaagt catgatttga taaaaatcat caaactcaaa aaaaaaccgc tagtatattc
      181 tgaatattcc gaatagttac gtagatgaaa atacttgtca ccgccgctac ttaattccgg
      241 tgggaaatta tttatttccg cataatcggc catgtattat ttgaaacaat tagtttgtaa
      301 ataatataaa ttgataacat atcaaataca tcaaaaatac cattcatagg cattattaat
      361 atagacatca atatagcaac atcaaattcc aattagtaat aagaaatgct ttttaattgc
      421 atgaaaataa tttcaaatga gcgttttttg atactttaga gtgtttccta ccctttaata
      481 tcaccgtgta gagttgatat cactacaaca gaaacatgca tgtcattttt ttacttcttt
      541 tttactacag aaaaatttat ctatttttct aaacatcggt gaaatactca taaaaggtaa
      601 ctattatgtc tatgccatta agcaatgccc ttcagagtca aattattaca gataatcact
      661 tccttcatca tccaaaagtc gacaataagt taacacgtga atatgcacgc atggatacgg
      721 aaaatatcta tcttctgcct cttactcgtg gaaataacca taattacgat ggaaaaagcg
      781 ttgtcgaaat tagaaa
//
LOCUS       DADMHC010000405          761 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.408, whole genome shotgun sequence.
ACCESSION   DADMHC010000405 DADMHC010000000
VERSION     DADMHC010000405.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 761)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 761)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.408"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            77..202
                     /locus_tag="JNZ57_004206"
     CDS             77..202
                     /locus_tag="JNZ57_004206"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HAY8830165.1"
                     /translation="MAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
     gene            238..>761
                     /locus_tag="JNZ57_004207"
     CDS             238..>761
                     /locus_tag="JNZ57_004207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707861.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3-like element IS600 family transposase"
                     /protein_id="HAY8830166.1"
                     /translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
                     YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
                     TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
                     ALRSQRPPAGLIHHS"
BASE COUNT          213 a          189 c          204 g          155 t
ORIGIN      
        1 atcccttcct gaaggcactt taggacaatg ggttaccgcc gccagaaaag ggctcggtac
       61 tcctggttcc cgcacggtgg ctgaactgga atctgaaatt ctgcaactgc gtaaggcgtt
      121 aaatgaagct cgccttgagc gagatatatt aaaaaaagca acagcgtatt ttgcacagga
      181 gtcgctgaaa aatacgcgtt aatcgaacaa tggcgacaac aatttcccat tgaagcgatg
      241 tgtcaggtat ttggtgtatc caggagcggt tattacaact gggtacagca tgaaccctca
      301 gacagaaaac aaagtgatga gcggctaaaa ctggagatta aggtggcaca tatccgcact
      361 cgcgaaacat atggaacccg gcggctccag acggagctgg cagagaatgg catcatcgtt
      421 ggtcgtgacc gactggcacg tcttcgtaag gagctaaggc tacgctgtaa gcagaaacgc
      481 aagttcagag cgactacgaa cccgaaccac aatctgccag ttgcgccaaa tctgctgaac
      541 cagacgttcg ctcctacagc accaaatcag gtctgggtgg cggacctgac gtatgttgcc
      601 acacaggagg gatggttgta cctcgctggc atcaaagatg tttatacgtg cgaaattgtc
      661 ggctacgcca tgggagagcg catgacaaaa gagctgacag gtaaagccct gtttatggcg
      721 ctcaggagcc agcgcccacc tgccgggcta atccaccact c
//
LOCUS       DADMHC010000406          755 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.409, whole genome shotgun sequence.
ACCESSION   DADMHC010000406 DADMHC010000000
VERSION     DADMHC010000406.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 755)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 755)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.409"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..213)
                     /locus_tag="JNZ57_004208"
     CDS             complement(<1..213)
                     /locus_tag="JNZ57_004208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830167.1"
                     /translation="MTVQTSKNPQVDIAEDNAFFPSEYSLSQYTSPVSDLDGVDYPKP
                     YRGKHKILVIAADERYLPTDNGKLFST"
BASE COUNT          194 a          116 c          213 g          232 t
ORIGIN      
        1 ggtcgagaac agttttccgt tatcggttgg caaataacgt tcgtccgcgg cgatcaccag
       61 aattttatgc ttaccgcgat acggttttgg atagtccacg ccatcaagat cagagacggg
      121 actggtatat tggctaagcg aatattctga agggaagaac gcattatctt cagcaatatc
      181 gacctgcgga tttttacttg tttgaacagt catagtgtat tccttattgt tgcttagtta
      241 gggtagtcac tatatttgcg actgagctgg tcgctatttt taactaggct ggaaaattga
      301 gtcaatatat cgaaagcggt agtcggcggg tgtaagtatg taatgatgat gctgcactgg
      361 tgttgaatat tattcacgcc aaattttcct tattgagcaa cgtcgtcgca agtggcctca
      421 atgattttag accattatca gagatgcggg gcggtgggga gagatttagt gatgtggaat
      481 attgtggtgc tgatgaatat ttatatcgcg gattggtaga gaaaaagctt atttcatgca
      541 ctatttttgc aaagatttct atttgggaag cgtgtttgtt acggggtaat tcatcagaat
      601 gtgcatttgg ggtgttggct ggaagagtcg ctggtagatg ttattgtggc aggaggggca
      661 gggtaaggtg ctgtatcgat atgctttggc aattgcgtgt gccgcagatg gagatgaaat
      721 gccaataaaa aagcctgagt tcgatgaggg acgaa
//
LOCUS       DADMHC010000407          754 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.410, whole genome shotgun sequence.
ACCESSION   DADMHC010000407 DADMHC010000000
VERSION     DADMHC010000407.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 754)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 754)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.410"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            12..509
                     /locus_tag="JNZ57_004209"
     CDS             12..509
                     /locus_tag="JNZ57_004209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011076308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HAY8830168.1"
                     /translation="MFALAGNKWNTTLPGGNMQFQGVIIAETCRIEAGDKQMTVNMGQ
                     ISSNRFHAVGEDSAPVPFVIHLRECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIA
                     TNIGVALFDDEGNLVPINRPPVNWKRLYSGSTSLHFIAKYRATGRWVTGGIANAQAWF
                     SLTYQ"
     gene            546..>754
                     /gene="fimC"
                     /locus_tag="JNZ57_004210"
     CDS             546..>754
                     /gene="fimC"
                     /locus_tag="JNZ57_004210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709919.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria chaperone FimC"
                     /protein_id="HAY8830169.1"
                     /translation="MSNKNANVRKSQEITFCLLAGILMFMAMMVAGRAEAGVALGATR
                     VIYPAGQKQVQLAVTNNDENSTYLI"
BASE COUNT          199 a          155 c          211 g          189 t
ORIGIN      
        1 cgttgctgcc aatgtttgct ctggccggaa ataaatggaa taccacgctg cccggcggaa
       61 atatgcaatt tcagggcgtc attattgcgg aaacttgccg gattgaagcc ggtgataaac
      121 aaatgacggt caatatgggg caaatcagca gtaaccggtt tcatgcggta ggggaagata
      181 gcgcaccggt gccttttgtt attcatttac gggaatgtag cacggtggtg agtgaacgtg
      241 tgggtgtggc gtttcacggt gtcgcggatg gtaaaaatcc ggatgtgctt tccgtgggag
      301 aggggccagg gatagccacc aatattggcg tagcgttgtt tgatgatgaa ggaaacctcg
      361 taccgattaa tcgtcctcca gtaaactgga aacggcttta ctcaggctct acttcgctac
      421 atttcatcgc caaatatcgt gctaccgggc gttgggttac tggcggcatc gccaatgccc
      481 aggcctggtt ctctttaacc tatcagtaat tgttcagcag ataatgtgat aacaggaaca
      541 ggacagtgag taataaaaac gccaatgtaa ggaaatcgca ggaaataaca ttctgcttgc
      601 tggcaggtat cctgatgttc atggcaatga tggttgccgg acgcgctgaa gcgggagtgg
      661 ccttaggtgc gactcgcgta atttatccgg cagggcaaaa acaagtgcaa cttgccgtga
      721 caaataatga tgaaaatagt acctatttaa ttca
//
LOCUS       DADMHC010000408          741 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.411, whole genome shotgun sequence.
ACCESSION   DADMHC010000408 DADMHC010000000
VERSION     DADMHC010000408.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 741)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 741)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.411"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..376)
                     /locus_tag="JNZ57_004211"
     CDS             complement(<1..376)
                     /locus_tag="JNZ57_004211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708021.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4376 domain-containing protein"
                     /protein_id="HAY8830170.1"
                     /translation="MNPRYTESGAVDCDVFFDDRDQAVPYTATADDVAPTGQQIWQEL
                     QSGKWGEIAPFTVTPEMLEAAREARRQEIEAWRAEQEAKPFTFEWNGRIWNAGPDSLG
                     RLSPVVMLAKSVTAQTHMAWSDA"
     gene            complement(405..>741)
                     /locus_tag="JNZ57_004212"
     CDS             complement(405..>741)
                     /locus_tag="JNZ57_004212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707257.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8830171.1"
                     /translation="TEDIIYRIVASSVRNRWGDPDIGGLIIAAYQGEADGDKVIRLVR
                     RQSYRGSRLGPVGISVPSTPTGTYIASPQFFITGCSEHSLPGSYCALSGVPDAHVSGA
                     MPGLFIRTS"
BASE COUNT          157 a          211 c          185 g          188 t
ORIGIN      
        1 cggcatcgct ccacgccata tgtgtttgtg ctgtgacaga ttttgccagc atgactaccg
       61 gggacaggcg gcccagtgag tcgggaccag cattccagat acgaccgttc cattcaaacg
      121 tgaacggctt cgcctcctgt tctgcgcgcc atgcttcaat ttcctgacgt ctggcctctc
      181 tggccgcttc cagcatttct ggtgtcacag tgaatggggc tatctcaccc catttgccgc
      241 tttgcagttc ctgccagatt tgctgacccg tcggagcgac atcatcagcg gtggctgtgt
      301 aggggactgc ctggtccctg tcgtcaaaaa aaacgtcaca gtctactgcg ccactttcgg
      361 tataacgggg attaatgatt tttttaattt acacggtgca ttcctcacga tgtgcgaata
      421 aaaagcccgg gcattgcgcc agagacatgt gcatccggca ccccggacag ggcgcaatat
      481 gaccccggta atgaatgctc tgaacatccc gtaatgaaaa attgtgggga tgctatatac
      541 gttccggtgg gagtactggg cactgaaatc cccaccggtc ccagtcgtga gcctctgtat
      601 gactgcctcc tgacaagtct gatgacttta tcaccgtcag cttctccctg gtacgcagca
      661 ataatcagcc cgccaatgtc agggtctccc catctgttgc ggacagagct cgccacgatt
      721 ctgtaaataa tatcttctgt g
//
LOCUS       DADMHC010000409          728 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.412, whole genome shotgun sequence.
ACCESSION   DADMHC010000409 DADMHC010000000
VERSION     DADMHC010000409.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 728)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 728)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.412"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            267..602
                     /gene="iraM"
                     /locus_tag="JNZ57_004213"
     CDS             267..602
                     /gene="iraM"
                     /locus_tag="JNZ57_004213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraM"
                     /protein_id="HAY8830172.1"
                     /translation="MKWIVIDTVIQPSCGISFSVIWSKIKLIIWYQSDAFLPPESIFT
                     LTHTGIMLNNKVLPVTIYNVVPFNKTFWNLIKNSQECPTNTDNVLNECFNNRCTLQIC
                     PYGLKQQSP"
BASE COUNT          271 a          155 c          112 g          190 t
ORIGIN      
        1 tgccatggtt ctttccacca tctgaaaaat gattctttaa aatacctgac atgtaataca
       61 gaaaaaacac aaaaccatac cttaaataaa aacctcatca tcaagcagat atgcatggat
      121 aaactacaag acgagatata aaccaccctg catttaaata aacaataaac aacatcagaa
      181 aaataattct gctctatggt ttacattcaa aaatatcatt tatacttttc agaacatcac
      241 cagcaatgca taaacaagga aaccaaatga agtggattgt gattgataca gttatccagc
      301 catcatgcgg aatatctttt tcagtcatat ggagtaaaat aaaattaata atctggtatc
      361 aatcggatgc tttcttacct cctgaaagta tatttacact gactcacaca ggcatcatgc
      421 tcaataacaa agtgctacct gtaaccattt acaacgtagt accattcaat aaaacattct
      481 ggaatttaat caaaaacagc caggaatgcc ctacaaatac agataacgta ttgaatgaat
      541 gctttaataa ccgttgcact ctgcaaatat gtccttatgg gctaaaacaa caaagtccat
      601 aaggagttta ctcacatctg acaaaatcaa tataaacagc ccctccggag aggggctgga
      661 gagtggcgct atgtgccatt gcatggtgcc gggtgcctcc cggtgaattc agtaccagca
      721 cctgaatc
//
LOCUS       DADMHC010000410          726 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.413, whole genome shotgun sequence.
ACCESSION   DADMHC010000410 DADMHC010000000
VERSION     DADMHC010000410.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 726)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.413"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            10..591
                     /locus_tag="JNZ57_004214"
     CDS             10..591
                     /locus_tag="JNZ57_004214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016247647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HAY8830173.1"
                     /translation="MNTAAEAIRALSMQMPGFRRQMNEGWYQIRIAGDDTAPEAVYAR
                     LHEQLGEGTVIHIVPRLAGAGKGGLQIVLGAAAIVGSFFTAGASMALWGSALAAGGFS
                     ATTMLFSLGASMILGGVAQMLAPKAKTPDYRATDNGRQNTYFSSLDNMIAQGNPMPVP
                     YGEMLVGSRRISQDISTRDEGGGGKVVVIGRQG"
BASE COUNT          167 a          180 c          233 g          146 t
ORIGIN      
        1 agcctgtatg tgaacacggc agcggaagcc attcgcgccc tgtcgatgca gatgccgggc
       61 tttcgccgtc agatgaacga aggctggtac cagatacgta ttgccggtga tgacacggca
      121 ccggaggcgg tgtatgcccg tcttcacgaa cagctgggtg agggaacggt catccacatt
      181 gtgccgcgac tggccggggc cggaaagggt ggactgcaga ttgtgttggg ggcggcagcc
      241 atcgtgggct ctttcttcac tgccggggca tcaatggcgt tatggggttc agccctggca
      301 gccggtggtt tttctgccac cacgatgctg ttttcacttg gagccagcat gattctgggc
      361 ggtgtggccc agatgctggc cccgaaggca aaaacaccgg attaccgcgc aacggataac
      421 ggcagacaga acacgtactt ttcctcgctg gataacatga ttgcccaggg gaacccgatg
      481 ccggtgcctt acggggaaat gctggttggc tcccgccgta tatcccagga catcagcacc
      541 cgtgatgaag gcgggggcgg aaaggtcgtg gttatcgggc gacagggata aaacataaaa
      601 aaatcccgca gtgatcgcgg agctgcgggg acagacaaat gaagatcaat gtgaaggagt
      661 tgtttttgtt actcgggcaa aaaaacacta acgcagcgaa attataagcg ccacagtcag
      721 tgtgtg
//
LOCUS       DADMHC010000411          719 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.414, whole genome shotgun sequence.
ACCESSION   DADMHC010000411 DADMHC010000000
VERSION     DADMHC010000411.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 719)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.414"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            29..>719
                     /locus_tag="JNZ57_004215"
     CDS             29..>719
                     /locus_tag="JNZ57_004215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005137363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HAY8830174.1"
                     /translation="MKDRNGSGAKGLPHCADGAAATTGDNADGRTAVKSAKPFPVSKR
                     QVWEAYKRVKANRGAAGIDGQTLAGFDENVTDNLYKLWNRMASGSYMPQAVRRVDIPK
                     ADGGVRPLGIPAVSDRIAQMVVKQILEPVLEPLFHADSYGYRPGKSAHQAIAQARKRC
                     WKFDWVVEVDIKGFFDDIDHDLLLKTVQHHTQARWVVMYIERRLKAPVQMPDGAMLAR
                     GRGTPQGGVISP"
BASE COUNT          176 a          169 c          233 g          141 t
ORIGIN      
        1 tacagggacg gagtaaaccg tagtagcggt gaaggaccgt aatgggtccg gagcaaaggg
       61 cttgccccat tgtgctgatg gtgcggcggc aaccacgggc gacaatgccg atgggaggac
      121 tgctgtaaaa tcggcaaagc catttcctgt aagtaaacga caggtatggg aagcttataa
      181 acgagtaaaa gccaaccgtg gggcggcagg cattgacggg cagacactgg ccgggtttga
      241 cgagaatgtt acagacaatc tctacaaact gtggaacaga atggcttccg gcagttatat
      301 gccgcaggcg gtaaggcgtg tggacattcc caaagctgac ggtggtgtac gtccgctcgg
      361 tattccggcc gtgtcggacc ggatcgccca gatggtcgtt aagcagatac tcgagccggt
      421 actggaaccc ctgttccatg cagactcgta tggttatcga ccgggtaaat ccgcacacca
      481 ggcgattgcg caggcgagga aacgctgctg gaagtttgac tgggtggtgg aagtcgatat
      541 taaaggcttc tttgatgata tcgatcatga cctgctactg aagacagtgc agcatcatac
      601 tcaggcacgc tgggtggtga tgtacattga gcgcaggctg aaggcaccgg tgcaaatgcc
      661 ggatggagca atgctggcac ggggtcgagg aacgccgcag ggcggcgtaa tctcccccc
//
LOCUS       DADMHC010000412          719 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.415, whole genome shotgun sequence.
ACCESSION   DADMHC010000412 DADMHC010000000
VERSION     DADMHC010000412.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 719)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.415"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..611)
                     /locus_tag="JNZ57_004216"
     CDS             complement(<1..611)
                     /locus_tag="JNZ57_004216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830175.1"
                     /translation="MLPRIRHNNFIGAVELFVKSSHTKTHSNNFFNNIQHAFKKKDWV
                     SNYDSLLTLWEFFRCATQIDKDSYQVLSSKNETVKAMDKFLISFSLKDNGAEYTMTLR
                     GSGFEYEEIPITINEYNSFMDFKNREFPLEQNRRLYAWDILQKKQSDIPKRIKGYIHQ
                     AIGDVSLGYALLEDIVSKLKRGKFELQIPGGGIKECDGWYIYE"
BASE COUNT          217 a          138 c          101 g          263 t
ORIGIN      
        1 ttttcgtaaa tataccatcc atcgcattct ttaattccac ctcctggtat ttggagttca
       61 aatttacccc gttttaattt gcttactata tcctccaata aggcataacc taaagacacg
      121 tcaccaatcg cctggtgaat ataaccttta atccttttcg gtatgtcaga ctgttttttc
      181 tgcagaatat cccaggcata caatcttctg ttttgttcta acggaaattc acggtttttg
      241 aaatccatga atgagttata ctcatttatt gttatgggga tttcttcgta ttcaaatcca
      301 ctgcctcgca atgtcattgt atattcggca ccgttatctt taaggctgaa actgataaga
      361 aacttatcca tggctttaac agtttcattt tttgatgaaa gcacttgata actatcttta
      421 tcaatctgag ttgcgcaacg aaaaaactcc cacaaagtta acaggctatc ataattcgaa
      481 acccaatctt ttttcttaaa tgcatgctga atattattaa aaaaattgtt tgaatgtgtt
      541 tttgtatgcg atgattttac gaataactcc accgcaccaa taaaattatt gtgtctgatc
      601 ctgggtaaca tatggctacc ttattttatt tggttatttt atgtcgccat taaatatctc
      661 attatagaag taaactatca aaaaacgctc attattaaaa tgtaacttat tagcaattg
//
LOCUS       DADMHC010000413          706 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.416, whole genome shotgun sequence.
ACCESSION   DADMHC010000413 DADMHC010000000
VERSION     DADMHC010000413.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 706)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.416"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            13..534
                     /locus_tag="JNZ57_004217"
     CDS             13..534
                     /locus_tag="JNZ57_004217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8830176.1"
                     /translation="MDVYANSQRVFRFQNGVAIAFKNIQAGTARKFTLSSANNSTKNA
                     AFYLWGNPSRSVVAELGDDSGWHFFSQRNTDNSITFAVNGQVIPLNYGNFDARYKYRT
                     EGVQDVRYGHEMYYSPGSNTVSWRFRAPSGHGLSGIAISDTGRDSADNVNGVYYRPLQ
                     KLINGTWYNVASV"
     gene            594..>706
                     /locus_tag="JNZ57_004218"
     CDS             594..>706
                     /locus_tag="JNZ57_004218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8830177.1"
                     /translation="MTKQYDVTWLFSEDGKNWYEELKNFASDTIKITYTGDG"
BASE COUNT          206 a          149 c          177 g          174 t
ORIGIN      
        1 ggagacggta ttctggatgt ttatgctaat agtcagcgtg tattccgctt tcagaatgga
       61 gtggctattg cttttaagaa tattcaggcc ggaactgcca gaaaattcac gttatccagc
      121 gccaacaact ccacgaaaaa tgcagcgttt tatttgtggg gtaatccatc caggtctgtt
      181 gttgcagagc ttggcgatga ttcaggctgg cattttttca gccagaggaa tacagataac
      241 agcatcacgt tcgccgtaaa cggacaggta attccgttaa attacggaaa cttcgatgcc
      301 cgctataaat atcgaacaga gggggtacag gatgtacggt atggccatga aatgtattac
      361 agccccggca gtaacaccgt ttcgtggaga tttcgcgcac cttcgggaca cgggctgtca
      421 gggatagcga tatcggatac cggccgtgac tcagcggata acgtcaacgg cgtgtattac
      481 cgcccgcttc agaaactgat taatggcacc tggtataacg tggcgagtgt ttaacaatgt
      541 tgcatttaaa aaatattact gcgggcaatc cgaaaaccgt ggaacaatat cagctgacaa
      601 aacaatatga tgtcacctgg cttttttcgg aagacggaaa aaactggtat gaagagctga
      661 agaatttcgc cagcgacaca attaaaataa cttacaccgg agacgg
//
LOCUS       DADMHC010000414          699 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.417, whole genome shotgun sequence.
ACCESSION   DADMHC010000414 DADMHC010000000
VERSION     DADMHC010000414.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 699)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 699)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.417"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(42..118)
                     /locus_tag="JNZ57_004219"
     tRNA            complement(42..118)
                     /locus_tag="JNZ57_004219"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(82..84),aa:Arg,seq:tcg)
     gene            complement(126..201)
                     /locus_tag="JNZ57_004220"
     tRNA            complement(126..201)
                     /locus_tag="JNZ57_004220"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(166..168),aa:Ile,seq:cat)
     gene            complement(242..>699)
                     /locus_tag="JNZ57_004221"
     CDS             complement(242..>699)
                     /locus_tag="JNZ57_004221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HAY8830178.1"
                     /translation="PNESDYLKLQALFARVAEEKHRRGELEKLHHQLVDTYTSLNRQY
                     AELLSEYKHLRRYFGVTVQVPYTDVWTHKPVQFYPGKHPCEKPAEMLQQIISASSRPG
                     DLIADFFMGSGSTVKAALALGRRAIGVELETERFEQTVREVQDLVSQNG"
BASE COUNT          153 a          211 c          165 g          170 t
ORIGIN      
        1 ttgctctgtc cggctgagct aacaacgcat gatgcagata atggaccgcc atcggggact
       61 tgaaccccgc gcagccagct tcgaaggctg gcgctctttc ctgatgagct aatggcggta
      121 tgtgatggtg gcccttgctg gatttgaacc agcgacctgg cgattatgag tcgctcgctc
      181 tcaccactga gctaaagggc cgggagccgc ataataacga ctcgtaatta attcttcaat
      241 atcatccgtt ctggctgact aaatcctgta cttcccgaac cgtctgctca aaacgttcag
      301 tctccagctc aacgccaatt gcacgacgcc cgagcgccag tgccgctttc actgtcgaac
      361 ccgaccccat gaaaaaatct gcaatcaggt cacccggacg actgctagcg ctgattatct
      421 gctgcagcat ttctgccggt ttttcgcacg gatgtttccc gggatagaac tgcaccggtt
      481 tatgcgtcca cacatcggta tacggcacct gcaccgtcac gccaaaatac cgccgcagat
      541 gtttatattc actcagcagc tccgcatact gccggttcag tgaggtatac gtatccacca
      601 gctggtggtg gagcttttcc agttcaccac gccgatgctt ctcttctgcc acccgggcaa
      661 acagcgcctg taatttcaga taatcgcttt cattcggca
//
LOCUS       DADMHC010000415          680 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.418, whole genome shotgun sequence.
ACCESSION   DADMHC010000415 DADMHC010000000
VERSION     DADMHC010000415.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 680)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.418"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            97..582
                     /locus_tag="JNZ57_004222"
                     /pseudo
     CDS             97..582
                     /locus_tag="JNZ57_004222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439272.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          237 a          138 c          106 g          199 t
ORIGIN      
        1 aaagtaggac atctgtttgc aattactttc acaacaatta aacattttta tgtttccgta
       61 tacatcatat tactctacca ttagagaaac tttattatgt tttctataaa accaggaccc
      121 agaaatttac ctatcgacaa ccccacattg ttatcatgga acattactga cggggatcta
      181 aattccaaat taaatacatt agaatatcta aactgtataa caaatattat taattcttgt
      241 ggagtttact ctcaaggatt aaaagacaga gaaattatat caacttttca cgcagaaaaa
      301 gttattaatg atctgttaaa aaacgattat aaaatttccc tttctccaga tacaacttac
      361 cgagagttga ataaagcagc acagcgtagc attacagcgc cagacaggat aggagaagga
      421 aaaacattgg tttatcaacg agatacaatg gttgaaagag gtgataacag cggtatttat
      481 cagtatggtc ctgctgaaca cttcacccac attatatctg acaaaccttc cccaaaagat
      541 aaatatgttg catatgctat taacattcct gactatgagc tggtggattt gcccctatat
      601 ttccagacat ctgttatcac ttaactcatt acaagcccgc tgccgcagat attcccgtgg
      661 cgagcgataa cccagcgcac
//
LOCUS       DADMHC010000416          676 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.419, whole genome shotgun sequence.
ACCESSION   DADMHC010000416 DADMHC010000000
VERSION     DADMHC010000416.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 676)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 676)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.419"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..193
                     /locus_tag="JNZ57_004223"
     CDS             <1..193
                     /locus_tag="JNZ57_004223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8830179.1"
                     /translation="QVSARTGEWEEDLLLGLISDEDREKLKAYRIYAKSLQAMDFSAI
                     TDKSSYNAIEWPVSPEGSS"
     gene            217..>676
                     /locus_tag="JNZ57_004224"
     CDS             217..>676
                     /locus_tag="JNZ57_004224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707257.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8830180.1"
                     /translation="MSVVISGALTDGAGIPMSGCQIILKSRVNTSEVVMRTRADVVTG
                     NNGEYSFEAQVGKYCVYLKRDWRDEYCVGDIAVYDDSKPGTLKTANHLSEIAAAGEKA
                     QQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFD"
BASE COUNT          180 a          157 c          191 g          148 t
ORIGIN      
        1 tcaggtcagt gcccggacag gggaatggga agaagacctg ctgctggggc taatcagcga
       61 cgaagaccgg gaaaaactga aagcgtaccg tatttacgcg aaatcgctgc aggcgatgga
      121 tttcagcgcc atcactgata aatcctcata caacgccatt gaatggcccg tctctccgga
      181 aggttcttcc tgatttaatt tatcgcgaga aaaactatgt ctgtagtgat atcaggtgcg
      241 ctgactgatg gcgcaggcat ccccatgtcc ggatgccaga ttattctgaa atcccgtgta
      301 aacacctcag aagtggtgat gcgtaccagg gctgatgtag tgaccggaaa taacggtgaa
      361 tattcgtttg aggcacaggt cggaaaatat tgcgtgtatc tgaaacggga ctggcgcgac
      421 gagtactgtg ttggcgacat tgctgtatac gacgactcaa agcccggcac tctgaaaacg
      481 gctaaccatc tgtctgaaat cgcagcagca ggcgaaaagg cacaacagaa gtcccgggat
      541 aatctggggc tgaaaagtgc ggccacgatg gaagcacaga gcgacattta cgaccggaca
      601 aaaggccgtc tggcgatacc cggcgcattc ggctttgggt gtgcttttct gcctgaagat
      661 gttatccgtt ttgaca
//
LOCUS       DADMHC010000417          672 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.420, whole genome shotgun sequence.
ACCESSION   DADMHC010000417 DADMHC010000000
VERSION     DADMHC010000417.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 672)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.420"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            1..672
                     /locus_tag="JNZ57_004225"
                     /pseudo
     CDS             1..672
                     /locus_tag="JNZ57_004225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT          154 a          175 c          188 g          155 t
ORIGIN      
        1 ggcttccatt tccatcagat gtccttcctg ctccgctact gaaggcgtgg tgcgtaacgg
       61 caaaagcact gccggacatc agcgctatct ctgctctcat tgccgtaaaa catggcaact
      121 acagttcact tacaccgcct ctcagcccgg tacgcaccag aaaatcattg atatggccat
      181 gaatggcgtc ggatgtcgcg ccagtgcacg cattatgggc gttggcctca acacggtttt
      241 acgtcactta aaaaactcag gccgcagtcg gtaacctcgc gcatacaacc gggcagtgat
      301 gtgattgtct gcgctgaaat ggacgaacag tggggctacg tcggtgctaa atcacgtcag
      361 cgctggctgt tttacgcgta tgacaggata cggaggacgg ttgtggcgca cgtcttcggt
      421 gaacgcactc tggccacact ggagcgtctt ctgagcctgc tgtcggcctt tgaggtcgtg
      481 gtatggatga cggatggctg gccgctgtat gaatcacgcc tgaagggaaa gctgcacgtt
      541 atcagcaagc gttacactca gcgcattgag cgacataatc tgaatctgag acaacatctg
      601 gcaaggctgg gacggaagtc actgtcgttc tcaaaatcgg tggagctgca tgacaaggtc
      661 atcgggcatt at
//
LOCUS       DADMHC010000418          670 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.421, whole genome shotgun sequence.
ACCESSION   DADMHC010000418 DADMHC010000000
VERSION     DADMHC010000418.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 670)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 670)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.421"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..378
                     /gene="ccp"
                     /locus_tag="JNZ57_004226"
     CDS             <1..378
                     /gene="ccp"
                     /locus_tag="JNZ57_004226"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HAY8830181.1"
                     /translation="KGYQLFKDNKCATCHGGIILGGRSFEPLGLKKDFNFGEITAADI
                     GRMNVTKEERDKLRQKVPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGKELPQED
                     VDDIVAFLHSLNGVYTPYMQDKQ"
     gene            589..>670
                     /locus_tag="JNZ57_004227"
     CDS             589..>670
                     /locus_tag="JNZ57_004227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HAY8830182.1"
                     /translation="MDQKLLTDFRSELLDSRFGAKAISTIA"
BASE COUNT          185 a          119 c          160 g          206 t
ORIGIN      
        1 aaaggctatc aattatttaa agataataaa tgtgcaactt gtcatggtgg tattattctc
       61 ggcggacgtt cctttgaacc gttggggctg aaaaaagact ttaactttgg ggaaattacg
      121 gcggcggata ttggtcgtat gaatgtgact aaagaagagc gtgataaatt gcgccagaaa
      181 gtacccggtt tacgtaacgt tgctttaacg gcaccgtact tccatcgcgg tgacgtgccg
      241 acgctggacg gggcggtgaa actgatgctg cgctatcagg taggcaaaga gctgccgcag
      301 gaggatgtgg atgatatcgt agctttcctg cacagtctga acggggtgta cacgccgtat
      361 atgcaggata aacaataatt aatttgatcg cccgaacagg aatgtttggg cgatttttat
      421 tacgataata aagtctgttt ttaatattat catgttaaat gtttatatta taaaaagtcg
      481 tttttctgct taggattttg ttatttaaat taagcctgta atgccttgct tccattgcgg
      541 ataaatccta cttttttatt gccttcaaat aaatttaagg agttcgaaat ggaccagaag
      601 ctgttaacgg atttccgctc agaactactc gattcacgtt ttggcgcaaa ggccatttct
      661 actatcgcgg
//
LOCUS       DADMHC010000419          661 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.422, whole genome shotgun sequence.
ACCESSION   DADMHC010000419 DADMHC010000000
VERSION     DADMHC010000419.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 661)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 661)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.422"
                     /strain="H114160392"
                     /db_xref="taxon:621"
BASE COUNT          186 a          131 c          133 g          211 t
ORIGIN      
        1 ccttactcag tcgaccttca aaataaacgt ttaataggga caatcaccat ttggattgtc
       61 cgctgaggag gcgaacgttt tcctagacag ctttatcatg tcagcccaca ttgttggcgc
      121 tgacaatact aaggacaaac gatggggaag tagcttttta gcgttatttt cgggagtaaa
      181 aaacatggta tctttccgta tgtcagttgt atcttgctgg tattcgtagt cgtgataagg
      241 catacaacga tatttatctt cacgttagtg aagaataagt tgttttgtga tctatgttaa
      301 tctgggatta caatccgggc ttgatacatc gcatcacgac ttttattctc ttcagaatag
      361 aatatgttac tccccgtttt acaggctcag gatttgaatt acaaattata cttttaagtg
      421 aacaataacc aggggtattt cttatttcct gaaaccaggc ttggcccatt tcgggatgag
      481 tttgaaaaaa ctcttgacgc atacgatagt gatgaaataa acgaaacaaa ttacgtcaac
      541 aaactcaggc gtcttgcctg acatgctcct gacatcattg atattcacgc tcatctggca
      601 tatgcatttg cgctctttat gctgcaattc tggcgaatgt tcatttacag cgtcatcagg
      661 a
//
LOCUS       DADMHC010000420          653 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.423, whole genome shotgun sequence.
ACCESSION   DADMHC010000420 DADMHC010000000
VERSION     DADMHC010000420.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 653)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 653)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.423"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..470)
                     /locus_tag="JNZ57_004228"
     CDS             complement(<1..470)
                     /locus_tag="JNZ57_004228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8830183.1"
                     /translation="MEKENITIDPRSSFTPSSSADIPVPPDGLVQRSTRIKRIQTTAM
                     LLLFFAAVINYLDRSSLSVANLTIREELGLSATEIGALLSVFSLAYGIAQLPCGPLLD
                     RKGPRLMLGLGMFFWSLFQAMSGMVHNFTQFVLVRIGMGIGEAPMNPCGVKVIN"
BASE COUNT          184 a          147 c          150 g          172 t
ORIGIN      
        1 tcgttaatga cttttacacc gcatgggttc atcggcgctt caccaatccc cataccgata
       61 cgcaccaaca cgaactgcgt aaagttgtgc accatgccag acattgcctg gaacagtgac
      121 cagaagaaca tccccagtcc cagcatcagg cgtgggcctt tacgatccaa tagtgggccg
      181 caaggaagtt gcgcaatccc gtaagcgagt gaaaacacgg agagcaaagc gccgatttcg
      241 gtggcactta atcccaattc ttcacgaatc gttaaatttg ctaccgacag cgaactgcgg
      301 tcgagataat tgattaccgc cgcaaaaaat aataacaaca tggcggtggt ttgaatgcgt
      361 ttaattcggg tactgcgttg aactaatcca tctggtggca cgggaatatc tgccgacgaa
      421 gatggagtaa atgaagaacg cggatcgatg gtgatatttt ctttttccac gccggactcc
      481 tgtatttata attttaattg tttacgtaat tgtgcattac gcaaggttga cattaacggc
      541 aggttaaagt tttaggactt tactaccgct cacaaaaaca tttttagtcg actgattgtg
      601 agcataggta agcgggaatt ttccggtatt tatcttttga taaaaccgtg cac
//
LOCUS       DADMHC010000421          638 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.424, whole genome shotgun sequence.
ACCESSION   DADMHC010000421 DADMHC010000000
VERSION     DADMHC010000421.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 638)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 638)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.424"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            1..534
                     /locus_tag="JNZ57_004229"
                     /pseudo
     CDS             1..534
                     /locus_tag="JNZ57_004229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
BASE COUNT          155 a          172 c          159 g          152 t
ORIGIN      
        1 cagttgtcta ggccttccga aatcaaccga ctgaaggcgc tggtcgcgaa actgcagcgt
       61 atgcagttcg gtaaaagctc agaaaaactt cgcgcaaaaa ccgaacggcg gatacaggaa
      121 gcacaggagc gaatcagcgc acttcaggag gaaatggcgg aaacactggg tgagcaatat
      181 gacccggtac tgccatcttc cctgcgccag tcttcagccc gtaaaccgtt accagcctca
      241 cttccccgtg ccccccgggt catccggccg gaagaggaat gctgtccggc ctgtggtggt
      301 gaactcagtc cactgggatg tgatgtgtca gagcagctgg agcttatcag cagcgccttt
      361 aaggttatcg aaaaacaacg ccctaaactg gcctgtcgcc ggtgcgacca tatcgtgcag
      421 gcaccggtgc cttcaaaacc cattgcacgc agttatgccg gagcggggct tctggcccat
      481 gttgttaccg gaaagtatgc agacgatctg ccattatacc gccaaagtga tctactattc
      541 cacacagcta tttagctctc tttttgttga gctcccatga ttctttcatt tattgttact
      601 aattatttta tgttatcatg atgttagaac acgctctg
//
LOCUS       DADMHC010000422          637 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.425, whole genome shotgun sequence.
ACCESSION   DADMHC010000422 DADMHC010000000
VERSION     DADMHC010000422.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 637)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 637)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.425"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(101..>637)
                     /locus_tag="JNZ57_004230"
     rRNA            complement(101..>637)
                     /locus_tag="JNZ57_004230"
                     /product="23S ribosomal RNA"
BASE COUNT          140 a          202 c          140 g          155 t
ORIGIN      
        1 accaccgcgc tacggccgcc aggcaaattc tgtttcatca gaccgcttct gcgttctgat
       61 ttaatctgta tcaggctgaa aatctttctc tcatccgcca aaacaccttc ggcgttgtaa
      121 ggttaagcct cacggttcat tagtaccggt tagctcaacg catcgctgcg cttacacacc
      181 cggcctatca acgtcgtcgt cttcaacgtt ccttcaggac tctcaaggag tcagggagaa
      241 ctcatctcgg ggcaagtttc gtgcttagat gctttcagca cttatctctt ccgcatttag
      301 ctaccgggca gtgccattgg catgacaacc cgaacaccag tgatgcgtcc actccggtcc
      361 tctcgtacta ggagcagccc ccctcagttc tccagcgccc acggcagata gggaccgaac
      421 tgtctcacga cgttctaaac ccagctcgcg taccacttta aatggcgaac agccataccc
      481 ttgggaccta cttcagcccc aggatgtgat gagccgacat cgaggtgcca aacaccgccg
      541 tcgatatgaa ctcttgggcg gtatcagcct gttatccccg gagtaccttt tatccgttga
      601 gcgatggccc ttccattcag aaccaccgga tcactat
//
LOCUS       DADMHC010000423          625 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.426, whole genome shotgun sequence.
ACCESSION   DADMHC010000423 DADMHC010000000
VERSION     DADMHC010000423.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 625)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.426"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            26..262
                     /locus_tag="JNZ57_004231"
     CDS             26..262
                     /locus_tag="JNZ57_004231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414837.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HAY8830184.1"
                     /translation="MFKKSVLFATLLSGVMAFSTNADDKIILKHISVSSVSASPTVLE
                     DAIADIARKYNASSWKVTSMRIDNNSTATAVLYK"
     gene            274..>625
                     /gene="rclC"
                     /locus_tag="JNZ57_004232"
     CDS             274..>625
                     /gene="rclC"
                     /locus_tag="JNZ57_004232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414835.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reactive chlorine species resistance protein
                     RclC"
                     /protein_id="HAY8830185.1"
                     /translation="MEKYLHLLSRGDKIGLTLIRLSIAIVFMWIGLLKFVPYEADSIT
                     PFVANSPLMSFFYEHPEDYKQYLTHEGEYKPEARAWQTANNIYGFSNGLGVVEVIIAL
                     LVLANPVNRWLGLLG"
BASE COUNT          185 a          117 c          131 g          192 t
ORIGIN      
        1 catcacttca ttgatggtat tttatatgtt taaaaaatct gttttatttg caacactatt
       61 atctggtgtt atggcatttt ccaccaatgc agatgataaa ataattctga aacatatcag
      121 cgtctcgtca gtatcagcat caccgacagt tctggaggat gccattgctg atatagccag
      181 aaaatataat gcttcatcct ggaaagtcac atcgatgcga attgataata attcaaccgc
      241 aacagcagta ttgtataaat aaggatgttc acaatggaaa aatacctgca cctgttaagt
      301 cggggagata aaattggcct gacattgatt cgtctgagta ttgcaattgt ttttatgtgg
      361 attgggttat taaagtttgt cccttacgag gcagacagca ttacaccatt cgtcgcaaac
      421 agtccactaa tgtcgttctt ttatgaacac ccggaagact ataaacagta tctgactcac
      481 gaaggcgaat acaaaccaga agcaagggca tggcaaacgg ccaataatat ctatggtttt
      541 tccaacggtc ttggcgtcgt ggaggtgatt attgctctgc tggttttggc taatcctgtc
      601 aatcgctggt taggtttatt gggag
//
LOCUS       DADMHC010000424          617 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.427, whole genome shotgun sequence.
ACCESSION   DADMHC010000424 DADMHC010000000
VERSION     DADMHC010000424.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.427"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            100..617
                     /locus_tag="JNZ57_004233"
                     /pseudo
     CDS             100..617
                     /locus_tag="JNZ57_004233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001356833.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
BASE COUNT          198 a          121 c          145 g          153 t
ORIGIN      
        1 cacctgttta ctgagaacaa tctggataca gaagccatca ctgtcagtta tgaatatata
       61 ctctccaggc atctgattgc taatactgaa tttagttatt tggcatttcc cgataactac
      121 aaccgtctgt ttataccacg gccaaaaact aaagctggta atggttcaaa acacttaata
      181 gtaaagcggt tggcagactg cttgctgctg gcggcatata caatgggaat atcgaaggat
      241 tcagggaaac agcagacaag ttggggggag atgcacctgc tggttacgat caatttatgg
      301 ataacaaagg gttactcatc gctggtgctt caatagttgc tggagcagtt ctggggagaa
      361 tgagactccc tgatttggaa tcacttgagc atttcggagc cagaggagca gtatcaggaa
      421 gaccatttaa tcccgacctt gccggtggtc caatagaaaa tctgacgaca gatggcgtaa
      481 caatcaacag ggaaggtatc gctattgttg aaaaacacat agccagattt ggtcatgacc
      541 ctgtaaatga agtgatgatc aatagactga aagacattga gaaaggaaaa atccccccag
      601 aacaagtaga tcttaac
//
LOCUS       DADMHC010000425          596 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.428, whole genome shotgun sequence.
ACCESSION   DADMHC010000425 DADMHC010000000
VERSION     DADMHC010000425.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 596)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 596)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.428"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(240..590)
                     /gene="ubiK"
                     /locus_tag="JNZ57_004234"
     CDS             complement(240..590)
                     /gene="ubiK"
                     /locus_tag="JNZ57_004234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis accessory factor UbiK"
                     /protein_id="HAY8830186.1"
                     /translation="MTYPYRTTMVLNTYQYRETTMIDPKKIEQIARQVHESMPKGIRE
                     FGEDVEKKIRQTLQAQLTRLDLVSREEFDVQTQVLLRTREKLALLEQRMSELENRSTE
                     IKKQPDPETLPPTL"
BASE COUNT          162 a          104 c          121 g          209 t
ORIGIN      
        1 actgttattt aaggattgct aatcattcaa atattatatt ttacttttcg ggttttatga
       61 aattagttta tctaaatatg gattaagtaa aacttaaaaa aatacataac aattatattt
      121 tcaattgcac tcattcattt ttgtgatgat attctgaatg gaattaagcg ataaggtaat
      181 agaaagcact gtaaattaga agattaattc ataatttaca gtgcattaaa gacaaatgtt
      241 tacagcgttg gggggagagt ctctggatct ggctgctttt taatctcagt actgcgattt
      301 tccagttcgc tcattctttg ttcaagcagc gccagtttct cacgagtccg taacaggact
      361 tgcgtttgga cgtcgaactc ttcacggctt acaaggtcga ggcgcgtcag ctgagcttgt
      421 agggtttggc ggattttttt ctccacatct tccccgaact ccctgattcc tttaggcatt
      481 gattcgtgaa cctggcgagc gatttgctca atttttttcg ggtcaatcat tgtagtttcc
      541 ctgtactgat aggtgttgag taccattgta gtgcgataag ggtaagtcat aaacca
//
LOCUS       DADMHC010000426          592 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.429, whole genome shotgun sequence.
ACCESSION   DADMHC010000426 DADMHC010000000
VERSION     DADMHC010000426.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 592)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 592)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.429"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..>592)
                     /locus_tag="JNZ57_004235"
     CDS             complement(<1..>592)
                     /locus_tag="JNZ57_004235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000080172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HAY8830187.1"
                     /translation="HLPLYRQSEIFARQGVELSRALLSNWVDACCQLMTPLNDALYRY
                     VMNSRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGK
                     HPEQHLSPFRGILQADAFNGYDRLFSAEREGGALTEAGCWAHARRKVHDVYISTKSAT
                     AEEALKLIGELYAIEHEIRGLPVSERLAVRQMQSKPL"
BASE COUNT          118 a          175 c          152 g          147 t
ORIGIN      
        1 agcggtttac tctgcatttg cctgaccgcc aggcgttcag acaccggcaa cccgcgtatt
       61 tcgtgctcga tggcgtacag ctcaccgatt agtttcaggg cttcttccgc tgtcgcgctt
      121 ttggtactga tatatacatc gtggactttg cgccgcgcat gagcccagca tcctgcttcc
      181 gtcaacgcgc cgccttctcg ttcggcactg aacagccgat cgtaaccatt aaacgcatct
      241 gcctgcagga taccccggaa gggactaagg tgctgctccg gatgtttacc ctgatggtcc
      301 ggtgagtagg cgaaccagac cgccggaggc tctggcgaac cggcattcct gtcatcccgg
      361 acatacgtcc agatatatcc tgttttcgcc ttcttcctgc ccggtgccag cacttttact
      421 ggtgtgtcat cagtgtgaac tttgcggctg ttcatcacat aacggtacag agcatcattc
      481 agcggcgtca ttaactggca gcacgcgtca acccagttgg agagtaatgc acggctcagt
      541 tcgacaccct gacgggcaaa aatttcactc tgacgataca gtggcaggtg tt
//
LOCUS       DADMHC010000427          582 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.430, whole genome shotgun sequence.
ACCESSION   DADMHC010000427 DADMHC010000000
VERSION     DADMHC010000427.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 582)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 582)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.430"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(<1..>582)
                     /locus_tag="JNZ57_004236"
     CDS             complement(<1..>582)
                     /locus_tag="JNZ57_004236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HAY8830188.1"
                     /translation="FHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVW
                     QRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN
                     MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF
                     IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL"
BASE COUNT          193 a          142 c          143 g          104 t
ORIGIN      
        1 aagcgttgaa acagcccagg tgagatttaa aaacggatag cgaagcttac cgaccccgag
       61 ggtaaagatg atgaagaaaa cgggtaccag gtaaccggca ataaagtcgt tttcataagg
      121 tgtgcacaac agaagtagaa gcacgcttaa cgctgccagc cagcttaagg taaatgcgcg
      181 tttctctttg cccaacgacg gcgcgatatc cctgcgccac aatatctgcg caaagtgggg
      241 acttacaatc atgcgagtga gatagtagaa aagcatattg taaatcagca cagcggtgaa
      301 aaggcttagc aaatcaacga ccgtgaaaat ggcatccgca tcgccgaaaa aggtggatat
      361 ctttagcggg aaatcaaaga agctccccac aagatacatg ctgcatttga tgccgatcgg
      421 cgtcaccaaa ccaagccaga acagacgttg ccagacatat cggctggtca atccataacg
      481 ccaacgcgtc cccagctgcc agcgtaatat tgcgcaggca cacaacacga caaacgtctg
      541 gctaccgagc atgaccgcag tctgtaaaaa agagagatga aa
//
LOCUS       DADMHC010000428          569 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.431, whole genome shotgun sequence.
ACCESSION   DADMHC010000428 DADMHC010000000
VERSION     DADMHC010000428.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 569)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 569)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.431"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            22..519
                     /locus_tag="JNZ57_004237"
     CDS             22..519
                     /locus_tag="JNZ57_004237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000109921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HAY8830189.1"
                     /translation="MSIDYNIEGFGFVGAYSKSDRTNEQVGDGYGDNAEVWSLAAKYD
                     ANNIYAAMMYGETRNMTVLANDHFANKTQNFEAVVQYQFDFGLRPSLGYVYSKGKDLY
                     ARDGHKGVDADRVNYIEVGTWYYFNKNMNVYTAYKFNLLDKDDAAITDAATDDQFAVG
                     IVYQF"
BASE COUNT          168 a          115 c          129 g          157 t
ORIGIN      
        1 gattcagggg gccagtctac gttgtctata gactacaaca tcgaaggttt tggttttgta
       61 ggtgcatata gcaaatctga tcgtactaat gaacaagttg gtgacggcta cggtgataac
      121 gctgaagtgt ggtcattagc agccaagtat gatgcaaata atatctatgc agcaatgatg
      181 tacggtgaaa cccgcaacat gaccgttttg gctaatgatc attttgcaaa taaaacccaa
      241 aactttgaag ctgttgtaca gtatcagttc gacttcggtt tacgtccgtc tttaggctac
      301 gtatattcca aaggcaaaga tctttatgct cgtgatggac ataaaggtgt tgatgctgac
      361 cgcgtaaatt atatcgaagt tggtacctgg tactacttca ataagaacat gaacgtctac
      421 acagcataca aatttaacct gctggataaa gacgatgcag cgattaccga tgccgcaact
      481 gatgaccagt ttgcagttgg tatcgtctac cagttctaat cagccaacgc gccgcggcgt
      541 gttactgtaa aacataacac tagcctgag
//
LOCUS       DADMHC010000429          544 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.432, whole genome shotgun sequence.
ACCESSION   DADMHC010000429 DADMHC010000000
VERSION     DADMHC010000429.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 544)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.432"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..340
                     /gene="dsbG"
                     /locus_tag="JNZ57_004238"
     CDS             <1..340
                     /gene="dsbG"
                     /locus_tag="JNZ57_004238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415137.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbG"
                     /protein_id="HAY8830190.1"
                     /translation="RPWVDSGKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYK
                     ASGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQ
                     KTLNIIMGNK"
BASE COUNT          194 a          102 c          121 g          127 t
ORIGIN      
        1 gcgcccgtgg gtagattctg gcaaagtgca attaagaaca ttgttggttg gggttatcaa
       61 gccagaaagc ccggcgacag cagcggcaat tcttgcctcc aaagatcccg caaaaacctg
      121 gcaacaatat aaagcctctg gtggcaagct taagctaaac gtgcctgcaa acgtaagtac
      181 agagcaaatg aaagtgttaa gtgacaatga gaaactgatg gacgatctgg gggcaaatgt
      241 cacgccggct atctattaca tgagtaagga aaatacgcta caacaggccg tggggttgcc
      301 cgatcagaaa acgcttaata tcattatggg gaataaataa aaggtaattc atggatggtt
      361 gaactatatc tctgcttttc aaccatccta aaaagcatga attgctcgct ctgccctaag
      421 tggctgtgct attttagaaa aacttaatcc tgagttaagc aaaaaaacat aatcaataaa
      481 aatatatacg cagaaaaaca ttgattaagt gaatatatca tggaagaaaa atataaccgg
      541 agta
//
LOCUS       DADMHC010000430          525 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.433, whole genome shotgun sequence.
ACCESSION   DADMHC010000430 DADMHC010000000
VERSION     DADMHC010000430.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 525)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.433"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..>525
                     /locus_tag="JNZ57_004239"
     CDS             <1..>525
                     /locus_tag="JNZ57_004239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416300.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HAY8830191.1"
                     /translation="VSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSR
                     ENISDAMTGLYNHKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDL
                     AITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE
                     IGFSSGIYAMKEND"
BASE COUNT          147 a          107 c          119 g          152 t
ORIGIN      
        1 gtgtctcgtt atccattgat attctttact ttatcacgtc ttcgtggaaa agcgttctgt
       61 tctggatttt gacggcgtta attttgctga atatggtccg gatgcacttc cgtttatacc
      121 aaaatgtgtc gcgagaaaat attagtgatg cgatgactgg actgtataat cacaaaattt
      181 taacccctga actggagcag cggttgcaga aactggtgca atccggttct tcggtgatgt
      241 ttattgcaat tgacatggac aagttaaagc aaataaatga caccctcggt catcaggagg
      301 gggatttagc gattacgtta ttagctcagg cgattaaaca atcgattcgt aaaagtgatt
      361 atgccatccg actcggtggc gatgaattct gcatcattct tgtcgattcg acgccgcaaa
      421 ttgcagcaca actgcctgaa cgtatcgaaa aacgtctgca acatatcgcg ccgcagaaag
      481 aaatcggctt ctcttccggt atttacgcga tgaaagaaaa cgata
//
LOCUS       DADMHC010000431          520 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.434, whole genome shotgun sequence.
ACCESSION   DADMHC010000431 DADMHC010000000
VERSION     DADMHC010000431.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 520)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 520)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.434"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..280
                     /locus_tag="JNZ57_004240"
     CDS             <1..280
                     /locus_tag="JNZ57_004240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309648.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="holin"
                     /protein_id="HAY8830192.1"
                     /translation="AFWLVLLIIAGWGGLVRYLIDVKQSKATWSWINALAQIVVSGFT
                     GVIGGLISIESGFSIYMILATAGISGAMGSVALTYFWERLTGVKNAKS"
     gene            267..>520
                     /locus_tag="JNZ57_004241"
     CDS             267..>520
                     /locus_tag="JNZ57_004241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family protein"
                     /protein_id="HAY8830193.1"
                     /translation="MQNLNPQRKAFLDMVAWSEGTDNGRQPTRNHGYDIIVGGELFTD
                     YSDHPRKLVTLNPKLKSTAAGRYQLLSRWWDAYRKQLGLK"
BASE COUNT          130 a          114 c          143 g          133 t
ORIGIN      
        1 agcgttctgg ctcgttttgc tgatcatcgc aggttggggc ggtctggtcc gctacctgat
       61 agatgtgaag cagagtaaag caacgtggag ttggataaat gctctggctc agatagtggt
      121 atcaggattc accggtgtta ttggtggcct gatcagcatc gaaagtggat tcagtattta
      181 catgattctc gcgacagcgg ggattagtgg tgcgatgggt tcggttgcac tgacgtactt
      241 ctgggaacga ctgacagggg tgaaaaatgc aaaatcttaa tcctcagcgt aaagctttcc
      301 tcgatatggt ggcatggtca gaaggaacgg ataacgggcg acaaccgaca cgtaaccacg
      361 gttatgatat tattgtcggt ggtgaactct tcactgatta ctccgatcac cctcgcaaac
      421 ttgtcacgct aaaccccaaa ctcaaatcaa cagctgcagg ccgttatcaa cttctttcac
      481 gctggtggga tgcttaccgc aagcagcttg ggctgaaaga
//
LOCUS       DADMHC010000432          518 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.435, whole genome shotgun sequence.
ACCESSION   DADMHC010000432 DADMHC010000000
VERSION     DADMHC010000432.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 518)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.435"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(162..>518)
                     /locus_tag="JNZ57_004242"
     CDS             complement(162..>518)
                     /locus_tag="JNZ57_004242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417590.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830194.1"
                     /translation="AITALNFYQGDVPSVMIRIQPENMSPFIIDISTGEHDNYIIRTL
                     DVGTFAPFGEQCTCSAVNKKELECIKETISKYCAKFTQKEAILTAPTHFNKTCITSDC
                     WQILFFSPDHFNNDFY"
BASE COUNT          160 a           83 c           99 g          176 t
ORIGIN      
        1 accgaggtct gttttagttt ttctatacct ggtgctagtg cttcgagatt attttctatg
       61 gggatttcag gaaggtcatt catttttcga cggactaaat cactactaat atcattacca
      121 attgatgaaa cagggaacat tattttatcc tttataaata atcaataaaa atcattatta
      181 aaatgatcgg gtgaaaaaaa gagaatttgc caacaatctg aagtaatgca ggttttatta
      241 aagtgcgtag gggctgttaa gatggcttct ttttgggtga actttgcgca atacttagaa
      301 atcgtctcct taatacattc cagctctttt ttattgacgg ctgagcaagt acattgttca
      361 ccaaaaggtg caaaagtgcc tacatctaat gttcgtatga tataattatc atgttctcct
      421 gtagaaatat ctatgatgaa tggactcata ttttccggtt ggattcggat catgacagaa
      481 ggaacatcgc cttgatagaa attcaatgca gtaattgc
//
LOCUS       DADMHC010000433          514 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.denovo.436, whole genome shotgun sequence.
ACCESSION   DADMHC010000433 DADMHC010000000
VERSION     DADMHC010000433.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.denovo.436"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            <1..279
                     /locus_tag="JNZ57_004243"
     CDS             <1..279
                     /locus_tag="JNZ57_004243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HAY8830195.1"
                     /translation="SLNVYCRNGQVEIDNNIGENALRSVAVGRKNYLFFGSDNGGESA
                     AIIYSLLVTCKLNGVEPEDWLREVIVKLNDWPSNRVHELLPWNFSAVK"
BASE COUNT          125 a          115 c          139 g          135 t
ORIGIN      
        1 agcctgaacg tgtactgtcg taatggccag gtggaaatcg acaacaacat cggtgaaaac
       61 gcgctgcgat cggtggcggt tggaagaaaa aattatctct tcttcggttc tgacaacggt
      121 ggagaaagcg cggcgattat ctacagtctg ctggtcacct gcaaactgaa cggagtggag
      181 ccggaggact ggttgcgcga agtgatcgtg aagctcaatg actggccgtc gaaccgagtg
      241 catgaactgc tgccctggaa cttctcagct gtaaaataat ccttccgcta cgtacttctc
      301 tgggcgctta ccactcaacg gcatcgtcaa aattatcaaa gcgcagaaca tagatttatc
      361 atgtgtttta tggatggctt tctccatcag gcatcgttcg tcacgggaaa ttggtgctat
      421 gatcggcatt gatcagtccg gttggtgatt tgttttgatt tggcgattga tcagatcgca
      481 caatccgggc tgagttccct ctaagtgatc tagg
//
LOCUS       DADMHC010000434        11028 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.guided.129, whole genome shotgun sequence.
ACCESSION   DADMHC010000434 DADMHC010000000
VERSION     DADMHC010000434.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11028)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11028)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11028
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.guided.129"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(40..645)
                     /locus_tag="JNZ57_004244"
                     /pseudo
     CDS             complement(40..645)
                     /locus_tag="JNZ57_004244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709462.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
     gene            complement(670..1401)
                     /locus_tag="JNZ57_004245"
     CDS             complement(670..1401)
                     /locus_tag="JNZ57_004245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001572122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
                     /protein_id="HAY8830196.1"
                     /translation="MSRKSCLIRLFKTTVSCKLFTAIILSIFLGQPALTYAGVVIGGT
                     RGVYLSNNADKSISVFSKEEKIPYLIQAWVDPFNKEDKSKAPFTVIPPVSRLEPSQEK
                     ILRIIHTKGVSLPDYRESVFWLNIKNIPPSASNKATNSLEIAVKTRIKLFWRPANIRL
                     IPEDAAPKVKWRREGRNLIAENPNPIHISVMDVIVDGHDVPLNMIRPFETLTLPLPAN
                     SAGGQMTWRFINDYGAVSDPIKMTL"
     gene            complement(1449..2021)
                     /locus_tag="JNZ57_004246"
     CDS             complement(1449..2021)
                     /locus_tag="JNZ57_004246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long polar fimbria major subunit LpfA-O113"
                     /protein_id="HAY8830197.1"
                     /translation="MKRNIIGGAFTLASLMLAGHALAEDGVVHFVGEIVDTTCEVTSD
                     TADQIVPLGKVSKNAFSGVGSLASPQKFSIKLENCPATYTQAAVRFDGTEAPGGDGDL
                     KVGTPLTAGNPGDFTGTGQAIAATGVGIRIFNQSDNSQVKLYNDSAYTAIDAEGKAEM
                     KFIARYVATNATVTAGTANADSQFTVEYKK"
     gene            2812..3051
                     /locus_tag="JNZ57_004247"
     CDS             2812..3051
                     /locus_tag="JNZ57_004247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001353740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1819 family protein"
                     /protein_id="HAY8830198.1"
                     /translation="MTPFRYNSDLTSGSLQTRECRIITGLLLQELDEAAWDKAMYKEN
                     VLQKRTQSTVRRISSALRKRLEHLSSDFWAFAFLC"
     gene            complement(3239..4216)
                     /gene="intI2"
                     /locus_tag="JNZ57_004248"
                     /pseudo
     CDS             complement(3239..4216)
                     /gene="intI2"
                     /locus_tag="JNZ57_004248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_023994230.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class 2 integron integrase IntI2"
     gene            4548..5021
                     /locus_tag="JNZ57_004249"
     CDS             4548..5021
                     /locus_tag="JNZ57_004249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001355915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethoprim-resistant dihydrofolate reductase
                     DfrA1"
                     /protein_id="HAY8830199.1"
                     /translation="MKLSLMVAISKNGVIGNGPDIPWSAKGEQLLFKAITYNQWLLVG
                     RKTFESMGALPNRKYAVVTRSSFTSDNENVLIFPSIKDALTNLKKITDHVIVSGGGEI
                     YKSLIDQVDTLHISTIDIEPEGDVYFPEIPSNFRPVFTQDFASNINYSYQIWQKG"
     gene            5116..5640
                     /gene="sat2"
                     /locus_tag="JNZ57_004250"
     CDS             5116..5640
                     /gene="sat2"
                     /locus_tag="JNZ57_004250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000704156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="streptothricin N-acetyltransferase Sat2"
                     /protein_id="HAY8830200.1"
                     /translation="MKISVIPEQVAETLDAENHFIVREVFDVHLSDQGFELSTRSVSP
                     YRKDYISDDDSDEDSACYGAFIDQELVGKIELNSTWNDLASIEHIVVSHTHRGKGVAH
                     SLIEFAKKWALSRQLLGIRLETQTNNVPACNLYAKCGFTLGGIDLFTYKTRPQVSNET
                     AMYWYWFSGAQDDA"
     gene            5698..6486
                     /gene="aadA1"
                     /locus_tag="JNZ57_004251"
     CDS             5698..6486
                     /gene="aadA1"
                     /locus_tag="JNZ57_004251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANT(3'')-Ia family aminoglycoside
                     nucleotidyltransferase AadA1"
                     /protein_id="HAY8830201.1"
                     /translation="MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKP
                     HSDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYP
                     AKRELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQ
                     DLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPA
                     QYQPVILEARQAYLGQEDRLASRADQLEEFVHYVKGEITKVVGK"
     gene            6562..7059
                     /locus_tag="JNZ57_004252"
     CDS             6562..7059
                     /locus_tag="JNZ57_004252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001444089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830202.1"
                     /translation="MRDLLKVVLSLVLAMASGQALADLPIVLVDEARLPYDYSPSNYD
                     ISPSNYDNSISNYDNSPSNYDNSESNYDNSSSNYDNSRNGNRRLIYSANGSRTFAGYY
                     VIANNGTTNFFSTSGKRMFYTPKGGRGVYGGKDGSFCGALVVINGQFSLALTDNGLKI
                     MYLSN"
     gene            7120..7491
                     /locus_tag="JNZ57_004253"
     CDS             7120..7491
                     /locus_tag="JNZ57_004253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000119696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830203.1"
                     /translation="MSYEPPRDGYTNGYIVDVMYDNRPSKYPAVFRTYVRIPDYVELD
                     NAEELADAIIREVELKEAWLTRVLGNSADPDASVGKWDRRLAQCGGIDEMSSGVQATY
                     FSPNGQLVGLVAYIDAEWMDE"
     gene            7901..8278
                     /locus_tag="JNZ57_004254"
     CDS             7901..8278
                     /locus_tag="JNZ57_004254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001271300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830204.1"
                     /translation="MSAAKALAYALCDKLESKKVDEVVRNLVSSGWNIREVAWEASSF
                     DHEMPYFDTGRDFDIGFPDTLSSKIEFLTANGSIVQARARLHFKQALIFAKASKHVAA
                     LKNSLDYYYGSSVIPPQNHGGYL"
     gene            8301..8453
                     /locus_tag="JNZ57_004255"
                     /pseudo
     CDS             8301..8453
                     /locus_tag="JNZ57_004255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011069623.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(8509..10125)
                     /locus_tag="JNZ57_004256"
     CDS             complement(8509..10125)
                     /locus_tag="JNZ57_004256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000251878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional antiterminator"
                     /protein_id="HAY8830205.1"
                     /translation="MVRLATFNDNVQVVHIGHLFRNSGHKEWRIFVWFNPMQERKWTR
                     FTHLPLLSRAKVVNSTTKQINKADRVIEFEASDLQRAKIIDFPNLSSFASVRNKDGAQ
                     SSFIYEAETPYSKTRYHIPQLELARSLFLINSYFCRSCLSSTALQQEFDVQYEVERDH
                     LEIRILPSSSFPKGALEQSAVVQLLVWLFSDQDVMDSYESIFRHYQQNREIKNGVESW
                     CFSFDPPPMQGWKLHVKGRSSNEDKDYLVEEIVGLEINAMLPSTTAISHASFQEKEAG
                     DGSTQHIAVSTESVVDDEHLQLDDEETANIDTDTRVIEAEPTWISFSRPSRIEKSRRA
                     RKSSQTILEKEEATTSENSNLVSTDEPHLGGVLAAADVGGKQDATNYNSIFANRFAAF
                     DELLSILKTKFACRVLFEETLVLPKVGRSRLHLCKDGSPRVIKAVGVQRNGSEFVLLE
                     VDASDGVKMLSTKVLSGVDSETWRNDFEKIRRGVVKSSLNWPNSLFDQLYGQDGHRGV
                     NHPKGLGELQVSREDMEGWAERVVREQFTH"
     gene            complement(10126..11001)
                     /locus_tag="JNZ57_004257"
                     /pseudo
     CDS             complement(10126..11001)
                     /locus_tag="JNZ57_004257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001243518.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional antiterminator"
BASE COUNT         3058 a         2540 c         2390 g         3040 t
ORIGIN      
        1 gtcagattct gaccagacgg ttcaggctgt acgcttacgt ccaatattca gtccattgcg
       61 cagattgaga taactggtat ctgtctcttg tgaaccataa tctgaacgta gtgtatgtga
      121 accagaaaaa tcgtagttga tggtgagcgc gttaatcccc tcatcccaac gcgtggggct
      181 gatgtaatca taagccatcg cgtccatgta gatttgggga atggatatat tcagctgcaa
      241 tttatcactg tcaaactgcc aggatgagcc ttcaatacgt ggagcaggat cgaggcaaac
      301 cgtctcatcc acatcattga acgatttgag cgcatcaact tttatgccaa aggaggacag
      361 tgttttttta atggcaataa agcaagcgtg cagatcagca tctggattat tctgaacaaa
      421 tgtcacatcc tgacgttcaa acattttacc gttgataaaa atatcaacgc tataaacacc
      481 tgggggcatc aggtttgccc gattaaactg gcgaatatcg actccggatt gatggtcgat
      541 ttccagaagc gccggattga atacactgac ctcggccatc aggttttgcg agaaaatcag
      601 acacgtccct gccgtgaggc caaccactat tctggtcgtc atcataatac gcctatcctt
      661 atcccttgct tacagcgtca tttttatcgg gtcactgact gcgccgtaat cattaataaa
      721 tcgccaggtc atttggcctc ccgcagaatt agcaggtaaa ggtaacgtga gcgtttcaaa
      781 aggacggatc atattgaggg gcacatcatg gccatcaacg atgacatcca tcacactgat
      841 atgaattggg ttgggattct ctgctatcag atttcgccct tcccggcgcc atttcacttt
      901 cggcgcagca tcttcgggaa taaggcggat atttgctggt cgccagaaca gcttgatacg
      961 cgtttttact gctatttcca gcgagttcgt cgctttgttg ctcgctgatg gcggaatatt
     1021 tttaatattc agccagaaga ctgactcgcg ataatcaggc aatgacacac ctttggtgtg
     1081 aataatgcgt aatatttttt cttgcgaagg ttctaatcgt gatactggcg gaataacggt
     1141 aaacggcgct ttgcttttat cctctttatt aaatggatct acccaagctt ggatgagata
     1201 aggtattttt tcttctttgc taaatacaga aatagattta tcagcattat tacttaagta
     1261 aaccccccgc gtaccaccaa tgacaacgcc tgcataagtt aatgctggtt ggcctaaaaa
     1321 aatgctgagt ataatcgcgg taaataactt acatgaaact gttgttttaa agagcctgat
     1381 taaacaactt tttctggaca taacgactcc ctggccaaag ccaactgaat aaaaaggccc
     1441 ttgataaatt atttcttata ttcgacagta aattgtgaat cagcgttcgc cgtaccagcc
     1501 gttacggtcg cattggttgc cacatagcgt gcaataaact tcatttcagc cttgccttca
     1561 gcatcgatag cggtataagc agagtcgtta taaagtttaa cctgcgaatt atcggactgg
     1621 ttaaaaatac gaataccaac gccggttgcc gcaatcgctt gtcctgtacc ggtaaaatca
     1681 ccagggttgc ctgctgtaag cggcgtaccc actttcaggt cgccgtcgcc gccaggcgct
     1741 tctgtaccat caaaacgaac ggctgcttga gtgtacgttg ccgggcaatt ttcaagttta
     1801 atactgaact tctgtggcga cgccagacta cctacacctg aaaatgcatt tttactgact
     1861 ttacccagtg ggacaatttg atcggctgta tcggaggtaa cttcacaagt agtgtcgaca
     1921 atttcaccga cgaagtgaac aacaccatct tctgccagtg catgcccggc cagcattaga
     1981 gatgccagag tgaatgcacc gcctataata ttacgcttca taaaaactcc attgatataa
     2041 tatatccttt accatgaatc atcacttata ttaataagtg tatttttgat tcaaaggaat
     2101 agtacaccaa agagacggct ttatctaaaa ataatattaa ttacgcaaaa ataaaatata
     2161 aatttattgt ttaaatatta tttaaacagt aaaaaatcaa gtttgttatc agacattaat
     2221 gataattcag aatatattta tatagaaaga tagatgaatt tattgatgtc agttataaaa
     2281 aagggccacc ggtcggcagc cctgtgggcg gacaaaatag ttgggaactg ggaggggtgg
     2341 aaatggagtt tttaaggatt atttagggaa gagtgacaaa atagatggga actgggtgta
     2401 gcgtcgtaag ctaatacgaa aattaaaaat gacaaaatag tttggaacta gatttcactt
     2461 atctggttaa ctaatctagc taacctgccg ctcagcttag tacgatccta tatccaactg
     2521 atcataatcc tttcatcagt atcccaaatt aaatccccct cctagactgc ctcaccaaca
     2581 ctttacagtg atcccgtatt tccggacagg tgattgattt ttttcgcttg tacaggtgtt
     2641 aagccacagt tatcttgatg tggacattat gcattgtaat agcccattaa catgcgctaa
     2701 gagcataaat taatatacag taacaagcat tacgaggtgc taatgtttgg aaagcagcct
     2761 cttccaacta caataataag ttaactatcc tccacccaca aataattaca aatgacccct
     2821 ttccgctata actccgatct caccagcggc tcgctacaaa cccgagagtg tcgcattatt
     2881 actggcttgt tactccaaga gcttgatgaa gctgcctggg ataaagccat gtataaggaa
     2941 aatgtgcttc agaaacgcac gcaatctacg gtaagacgta tttcttcagc gcttagaaaa
     3001 cgcctagaac acctaagctc tgacttttgg gcttttgcgt ttttatgtta ggcattgtct
     3061 ggcaactgga ggaagtgtaa tgaccatgaa tggtcactgt gattgacagt atcttgctta
     3121 aacttatctg aacaatggta gaactggctc atatttatcc cctctatgat tgtttatctt
     3181 tttcaccata aaaagtatca ggggctactc agggctacat aaagatattt atctactttt
     3241 actgattgat aagtagcatc agtccatccg caggactggt ggtgccggca aaatgctgac
     3301 ccaacacatg cgtatagatt tgcgtggtct taacatcgtt atgccctaag agttcttgca
     3361 cagtgcgaat atcacgcccc gcttgtaata gatgcgtagc aaacgagtga cgaaatgtat
     3421 gacaagtgac acgcttgcta acgatgcctg ctttttgtac ggctgccttc aatgcctttc
     3481 gcgcaacgga gtcatgcaga tgatggcggc ataatttgcc gttatacggg tggttgcaga
     3541 gcgtgctgga gggaaagaca aacatccacg ccgcttgtcg ataagcagaa gggtatttgt
     3601 gatctaaagc aaaaggcagc gatggcccta cgccttgtaa gttgtcgtct tgctgaataa
     3661 gccgcgcttg ctcaatgagt tattttattg ctgggattag gcgcgtgggc agtaggctgt
     3721 ttctgctttt cccaccctta ccgtcatgca cagtgatgca gccattatca aaatcaaaat
     3781 ctttaacccg caaacgcaag cattcattaa tgcgcaaacc tgcaccatac agcagcgtaa
     3841 aaataacttg gttgcgagta tccataacct gcaaaatgcg ttgcacttca tttgcagaga
     3901 taacagaggg tagccgtcta ggcttgcttg cagggatata atcaatatcg cccaacggct
     3961 gttgtaaaaa cctgttgtac aaaaaagcta gggcatttaa agcgattttc tgcgtgttta
     4021 tggctacatg tctgctgttt gctaagctgg ataaaaacag cctgacctct tcactgccca
     4081 tggtctgagg atgacgtttt ttgtgaaaca gaataaaacg cttaatccag tgcaggtaag
     4141 ttttttcagt tttcagcgca taaccttttt gtcgcatatc cgtgcgtata gaatttaaaa
     4201 atggactgtt agacataaaa cgctccttgt cttgcaactg tctgcctata cagcctattc
     4261 tagctgggat ttaaaaaagt gcctgttttt tacgcctaga gatgcttgtt taccggtaga
     4321 gttttaattt aatgctaaat aaattaaaat gttatgagtt ctttgggtga gataatgtgc
     4381 atcgtgcaag caggatagac ggcatgcacg atttgtaata acagagtgtc ttgtattttt
     4441 aaagaaagtc tatttaatac aagtgattat attaattaac ggtaagcatc agcgggtgac
     4501 aaaacgagca tgcttactaa taaaatgtta acctctgagg aagaattgtg aaactatcac
     4561 taatggtagc tatatcgaag aatggagtta tcgggaatgg ccctgatatt ccatggagtg
     4621 ccaaaggtga acagctcctg tttaaagcta ttacctataa ccaatggctg ttggttggac
     4681 gcaagacttt tgaatcaatg ggagcattac ccaaccgaaa gtatgcggtc gtaacacgtt
     4741 caagttttac atctgacaat gagaacgtat tgatctttcc atcaattaaa gatgctttaa
     4801 ccaacctaaa gaaaataacg gatcatgtca ttgtttcagg tggtggggag atatacaaaa
     4861 gcctgatcga tcaagtagat acactacata tatctacaat agacatcgag ccggaaggtg
     4921 atgtttactt tcctgaaatc cccagcaatt ttaggccagt ttttacccaa gacttcgcct
     4981 ctaacataaa ttatagttac caaatctggc aaaagggtta acaagtggca gcaacggatt
     5041 cgcaaacctg tcacgccttt tgtaccaaaa gccgcgccag gtttgcgatc cgctgtgcca
     5101 ggcgttaggc gtcatatgaa gatttcggtg atccctgagc aggtggcgga aacattggat
     5161 gctgagaacc atttcattgt tcgtgaagtg ttcgatgtgc acctatccga ccaaggcttt
     5221 gaactatcta ccagaagtgt gagcccctac cggaaggatt acatctcgga tgatgactct
     5281 gatgaagact ctgcttgcta tggcgcattc atcgaccaag agcttgtcgg gaagattgaa
     5341 ctcaactcaa catggaacga tctagcctct atcgaacaca ttgttgtgtc gcacacgcac
     5401 cgaggcaaag gagtcgcgca cagtctcatc gaatttgcga aaaagtgggc actaagcaga
     5461 cagctccttg gcatacgatt agagacacaa acgaacaatg tacctgcctg caatttgtac
     5521 gcaaaatgtg gctttactct cggcggcatt gacctgttca cgtataaaac tagacctcaa
     5581 gtctcgaacg aaacagcgat gtactggtac tggttctcgg gagcacagga tgacgcctaa
     5641 caattcattc aagccgacac cgcttcgcgg cgcggcttaa ttcaggagtt aaacatcatg
     5701 agggaagcgg tgatcgccga agtatcgact caactatcag aggtagttgg cgtcatcgag
     5761 cgccatctcg aaccgacgtt gctggccgta catttgtacg gctccgcagt ggatggcggc
     5821 ctgaagccac acagtgatat tgatttgctg gttacggtga ccgtaaggct tgatgaaaca
     5881 acgcggcgag ctttgatcaa cgaccttttg gaaacttcgg cttcccctgg agagagcgag
     5941 attctccgcg ctgtagaagt caccattgtt gtgcacgacg acatcattcc gtggcgttat
     6001 ccagctaagc gcgaactgca atttggagaa tggcagcgca atgacattct tgcaggtatc
     6061 ttcgagccag ccacgatcga cattgatctg gctatcttgc tgacaaaagc aagagaacat
     6121 agcgttgcct tggtaggtcc agcggcggag gaactctttg atccggttcc tgaacaggat
     6181 ctatttgagg cgctaaatga aaccttaacg ctatggaact cgccgcccga ctgggctggc
     6241 gatgagcgaa atgtagtgct tacgttgtcc cgcatttggt acagcgcagt aaccggcaaa
     6301 atcgcgccga aggatgtcgc tgccgactgg gcaatggagc gcctgccggc ccagtatcag
     6361 cccgtcatac ttgaagctag gcaggcttat cttggacaag aagatcgctt ggcctcgcgc
     6421 gcagatcagt tggaagaatt tgttcactac gtgaaaggcg agatcaccaa ggtagtcggc
     6481 aaataatgtc taacaattcg ttcaagccga cgccgcttcg cggcgcggct taactcaagc
     6541 gttagagagc tggggaagac tatgcgcgat ctgttgaagg tggttctaag cctcgtactt
     6601 gcgatggcat cggggcaggc acttgctgac ctgccaattg ttttagtgga tgaagctcgt
     6661 cttccctatg actactcccc atccaactac gacatttctc caagcaacta cgacaactcc
     6721 ataagcaatt acgacaatag tccatcaaat tacgacaact ctgagagcaa ctacgataat
     6781 agttcatcca attacgacaa tagtcgcaac ggaaatcgta ggcttatata tagcgcaaat
     6841 gggtctcgca ctttcgccgg ctactacgtc attgccaaca atgggacaac gaacttcttt
     6901 tccacatctg gcaaaaggat gttctacacc ccaaaagggg ggcgcggcgt ctatggcggc
     6961 aaagatggga gcttctgcgg ggcattggtc gtcataaatg gccaattttc gcttgccctg
     7021 acagataacg gcctgaagat catgtatcta agcaactagc ctgctctcta ataaaatgtt
     7081 aggcctcaac atctagtcgc aagctgaggg gaaccactag tgtcatacga acctccaaga
     7141 gacggttaca caaacgggta cattgttgat gtcatgtatg acaatcgccc aagtaagtat
     7201 ccagctgtgt tcagaacgta cgtccgaatt ccagactatg tcgaactaga taacgcggag
     7261 gagctggccg acgcaatcat tcgagaggtt gagttaaagg aggcatggct cacaagggtc
     7321 ttggggaact cagccgatcc tgacgcttct gtgggcaagt gggaccggcg cctagcgcag
     7381 tgcggtggta ttgatgagat gtcaagtggg gtgcaggcaa catacttcag tccaaacggt
     7441 cagctggtcg gcttagtggc atacattgat gccgaatgga tggatgaata gctctgacgt
     7501 tacgattcag gtgagacaac cagatgggca ttgcgtacaa gctcagttgc caccgatgtg
     7561 gctacgagtc tgatcttctt tacctaggcc aaggtatggc gatgcttcct gagcaaatag
     7621 tcggaacgtg cacatgctgc gacaatctaa cgacgatttc tataaatgaa agctacggag
     7681 tatgctcact ttgtggggct aaggatcgtg tgatatttac aagctatcag catgaggcaa
     7741 ggccaagaaa tccctgctat ctagagagaa gtttcaaata tcaatgccca agatgccatg
     7801 ccttcagtat ggagcctccg gatctaccgg agatgctttg ggactaatgc tccgctttgc
     7861 ctcgggtatc cgttcgacct atgtttaaga ggaaacgcac gtgtctgccg ccaaagctct
     7921 tgcctatgca ctttgtgaca agttggaaag caaaaaagtt gatgaagtcg tacgaaatct
     7981 tgtttctagc ggctggaata ttagggaagt ggcctgggaa gcttcgtcct ttgatcatga
     8041 aatgccctac tttgacacgg ggcgggactt cgatattgga tttcctgaca cgctgtcatc
     8101 caagattgag tttttgaccg cgaatggatc aatcgtccaa gcacgtgctc gcctgcactt
     8161 caagcaggct ctaatttttg ccaaggcgtc caaacatgtc gccgcgctca agaactcatt
     8221 ggattactac tatggatcgt ctgtaatccc ccctcaaaac cacggaggct atttgtagaa
     8281 aattccatta atatgaactc aaggtgttcc ctacggacga atcagcgatg aaggtggtgt
     8341 acctggctat ccaggcggcg accaagaaat ggacgatgcc gatccgcaac tggaagccgg
     8401 ccatgaaccg ttttatgatc gaatttggtg accgtttaaa tggccacctt taactgaccg
     8461 gcaaaagcac ttacacaaaa gggtttacag gctctttcag tcattccttt aatgcgtaaa
     8521 ttgctctcta accactctct cagcccaccc ttccatatcc tctctcgata cttgcagctc
     8581 ccccaacccc tttggatgat tcacccctct atgcccgtct tgtccatata attgatcaaa
     8641 caaactattt ggccaattca atgagctctt caccactcca cgccgtatct tttcaaaatc
     8701 attccgccat gtttcgctat caacgccact caacactttg gtagaaagca ttttcacccc
     8761 atccgatgca tccacctcta gcaatacaaa ttcactgcca ttacgttgca ccccaacggc
     8821 tttaatcact cttggtgagc catctttaca cagatgtaat cggctacgcc caacttttgg
     8881 caaaaccaag gtttcttcaa aaagcacccg acatgcaaat ttagttttta gaattgaaag
     8941 tagctcatca aaagcagcaa atcgattagc aaaaatagag ttgtaattgg ttgcatcctg
     9001 cttcccaccc acatctgccg ctgctaggac accacctaag tgtggctcat cagtactaac
     9061 caaattacta ttttcacttg ttgttgcttc ttctttttct aaaatagttt ggctactttt
     9121 tcttgccctg cgagattttt caattcgact aggtctacta aaacttatcc atgtcggctc
     9181 agcctctatg actcgtgtgt ctgtgtctat attggctgtt tcctcatcgt ccaactgtag
     9241 atgctcatca tcaacaactg actctgttga aaccgctatg tgctgcgtac taccatcacc
     9301 tgcctccttt tcctgaaaag aggcatggct aatagctgtt gtgctaggaa gcatagcgtt
     9361 gatttctaaa cctactattt cctcaactaa ataatcctta tcctcgttag aagaacgtcc
     9421 ttttacatgt aatttccaac cctgcatggg cggagggtca aagctaaagc accagctttc
     9481 aacgccgttc ttaatttctc tattttgttg atagtgccta aaaatacttt catacgaatc
     9541 cataacatct tgatccgaaa acaaccaaac caaaagctgc actacggccg actgctctaa
     9601 cgccccttta ggaaacgatg aactgggtaa gatccttatc tctaaatgat ctcgctcaac
     9661 ctcatactga acgtcgaact cttgctgtaa agcggtactg ctcaaacagc ttcgacagaa
     9721 ataggagtta attaaaaata atgaccgagc tagctctaac tgtgggatgt gataacgagt
     9781 cttgctatat ggtgtttcag cttcgtaaat aaatgaactc tgcgctccat ccttgttgcg
     9841 tacggaagca aaggacgaga gattaggaaa atcgattatt ttggctcgtt gaagatccga
     9901 tgcttcaaac tcaatcacac gatccgcctt atttatttgc tttgttgtac tgttaaccac
     9961 cttagctcga cttaataaag gcaaatgagt aaatcgagtc catttccgtt cttgcattgg
    10021 attaaaccaa acaaaaatac gccactcctt atgacccgag ttacggaata aatgaccaat
    10081 atgtacaacc tgcacattgt cattaaatgt agctagccta accactcact cttccccata
    10141 aaccatttcc aagaatcttt gtgcttcctc agttatccgc tctttagata acgttgcact
    10201 tcttaataat cgccagcgcc taagctcaac atcttcctgt ttaagcttaa taaaagcttg
    10261 gctaatccgt ctaatttgat aatcttccac actctctgag taacgcttta agcaaagcgc
    10321 taccaaaggc agtttctgta gattttttgc aagagaggtt ccgttaggag tttgctttaa
    10381 cagccagctc gatgtcgctc ttgggtgatc aaggctacta tctagacgct ttatgattct
    10441 taatagttgt cgtacagcaa ttcgatctct ttggttccaa tcaactctag gggcgggtgc
    10501 cagacgctct tgttgatgct gttgattcca gtgaactagc caatccctgt catgtcggta
    10561 aagccaagcg tatagcaccc caccctctaa agactgtctt gccgccttaa ttccttggta
    10621 tttatgcact agttgctgcc agtctttatg cttaacagat aaatcttcag agttaggttg
    10681 cacagactgg ctaacaggtc ttgtcgttat agagtgctca gtaagagcac ttgcctgctg
    10741 tagcgcttct ataaccgtta gttttggcaa taaggcttgc cacacaatac tatgctgtaa
    10801 ataactaaag gcttttctat gcttacggaa tatacttttc agccaacacg tgtccttgtt
    10861 ctctgccaac tttaaatcca gtttctctag tgcctcatca ctaaaagtct gcctcactct
    10921 ctccgccacc aagtcatgac gaatgtgctt gcttttggtt agccctagat cctgcgctaa
    10981 gcgctgataa aacgtaagcg tacagcctga accgtctggt cagaatct
//
LOCUS       DADMHC010000435        10785 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.guided.138, whole genome shotgun sequence.
ACCESSION   DADMHC010000435 DADMHC010000000
VERSION     DADMHC010000435.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10785)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10785)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10785
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.guided.138"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            complement(16..200)
                     /locus_tag="JNZ57_004258"
                     /pseudo
     CDS             complement(16..200)
                     /locus_tag="JNZ57_004258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014334100.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
     gene            complement(419..1396)
                     /gene="epmA"
                     /locus_tag="JNZ57_004259"
     CDS             complement(419..1396)
                     /gene="epmA"
                     /locus_tag="JNZ57_004259"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000004771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P--(R)-beta-lysine ligase"
                     /protein_id="HAY8830206.1"
                     /translation="MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMS
                     QATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNE
                     EMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEID
                     PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPAS
                     QASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQ
                     HPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA"
     gene            1721..3529
                     /gene="frdA"
                     /locus_tag="JNZ57_004260"
     CDS             1721..3529
                     /gene="frdA"
                     /locus_tag="JNZ57_004260"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase (quinol) flavoprotein
                     subunit"
                     /protein_id="HAY8830207.1"
                     /translation="MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRS
                     HTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGC
                     PWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLD
                     ILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAL
                     SHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLG
                     EPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICE
                     LAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRL
                     GSNSLAELVVFGRLAGEQATERAATAGNGNEEAIEAQAAGVEQRLKDLVNQDGGENWA
                     KIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIE
                     LGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLEY
                     SDVKITTLPPAKRVYGGEADAADKAEAANKKEKANG"
     gene            3522..4256
                     /locus_tag="JNZ57_004261"
     CDS             3522..4256
                     /locus_tag="JNZ57_004261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HAY8830208.1"
                     /translation="MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYI
                     KDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERD
                     LVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACP
                     QFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKH
                     VDPAAAIQQGKVESSKDFLIATLKPR"
     gene            4267..4662
                     /gene="frdC"
                     /locus_tag="JNZ57_004262"
     CDS             4267..4662
                     /gene="frdC"
                     /locus_tag="JNZ57_004262"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HAY8830209.1"
                     /translation="MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELI
                     FGLFALKNGPEAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDE
                     KMGPEPIIKSLWAVTVVATIVILFVALYW"
     gene            4673..5032
                     /gene="frdD"
                     /locus_tag="JNZ57_004263"
     CDS             4673..5032
                     /gene="frdD"
                     /locus_tag="JNZ57_004263"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HAY8830210.1"
                     /translation="MINPNPKHSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGL
                     FPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFY
                     GLAAILTVVTLIGIVTI"
     gene            5095..6228
                     /gene="blaEC"
                     /locus_tag="JNZ57_004264"
     CDS             5095..6228
                     /gene="blaEC"
                     /locus_tag="JNZ57_004264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BlaEC family class C beta-lactamase"
                     /protein_id="HAY8830211.1"
                     /translation="MFKTTLCALLITASCSTFAAPQQINDIVHRTITPLIEQQKIPGM
                     AVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLS
                     DPATKYWPELTAKQWNGITLLHLATYTAGGLPLQMPDEVKSSSDLLRFYQNWQPAWAP
                     GTQRLYANSSIGLFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWG
                     YREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLTPLDINEKTLQQGIQLAQSRYW
                     QIGDMYQGLGWEMLDWPVNPDSIINGSDNKIALAARPVKAIKPPTPAVRASWVHKTGA
                     TGGFGSYVAFIPEKELGIVMLANKNYPNPARVAAACQILNALQ"
     gene            6317..6850
                     /locus_tag="JNZ57_004265"
     CDS             6317..6850
                     /locus_tag="JNZ57_004265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HAY8830212.1"
                     /translation="MRLLPLVAAATAAFLVVACSSPTPPRGVTVVNNFDAKRYLGTWY
                     EIARFDHRFERGLEKVTATYSLRDGGGLNVINKGYNPDREMWQQSEGKAYFTGAPTRA
                     ALKVSFFGPFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVAT
                     REGFDVSKFIWVQQPGS"
     gene            complement(6847..7164)
                     /locus_tag="JNZ57_004266"
     CDS             complement(6847..7164)
                     /locus_tag="JNZ57_004266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound-resistance protein
                     SugE"
                     /protein_id="HAY8830213.1"
                     /translation="MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMA
                     LLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKL
                     STH"
     gene            complement(7346..7492)
                     /gene="ecnB"
                     /locus_tag="JNZ57_004267"
     CDS             complement(7346..7492)
                     /gene="ecnB"
                     /locus_tag="JNZ57_004267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein toxin entericidin B"
                     /protein_id="HAY8830214.1"
                     /translation="MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAAT
                     KAQQ"
     gene            complement(7603..7728)
                     /gene="ecnA"
                     /locus_tag="JNZ57_004268"
     CDS             complement(7603..7728)
                     /gene="ecnA"
                     /locus_tag="JNZ57_004268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein antitoxin entericidin A"
                     /protein_id="HAY8830215.1"
                     /translation="MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS"
     gene            complement(7780..8346)
                     /gene="efp"
                     /locus_tag="JNZ57_004269"
     CDS             complement(7780..8346)
                     /gene="efp"
                     /locus_tag="JNZ57_004269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004871142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HAY8830216.1"
                     /translation="MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLR
                     RLLTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGD
                     NAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGA
                     VVKVPLFVQIGEVIKVDTRSGEYVSRVK"
     gene            8388..9437
                     /gene="epmB"
                     /locus_tag="JNZ57_004270"
     CDS             8388..9437
                     /gene="epmB"
                     /locus_tag="JNZ57_004270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000940527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HAY8830217.1"
                     /translation="MAHIVTLNTPSREDWLTQLADVVTDPDELLRLLNIDADEKLLAG
                     RSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEFVVASGFSTDPLEEQHSVVP
                     GLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQGNKRNWQTALEYVAAHPELDEM
                     IFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTL
                     QILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFD
                     AGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVPKLAREIGGEPSKTP
                     LDLQLRQQLLIKQGS"
     gene            9811..10680
                     /locus_tag="JNZ57_004271"
     CDS             9811..10680
                     /locus_tag="JNZ57_004271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8830218.1"
                     /translation="MAISIKGVNTGVIRKSNNFIALALKIKEPRNKESLFFMSVMELR
                     DLLIALESRLHQKHKLDAAARLQYEQARDKVIKKMAENIPEILVDELKNADINRRVNT
                     LELTDNQGENLTFVLTLHDGSKCELVVNELQIEMLARAIIHAINNAEMRELALRITSL
                     LDFLPLYDVDCQENGNLEYDTYSQPEWKHNLFDHYLAVLYRFKDESGKEQFSGAVVKT
                     REATPGKEVEAITRRMLDFSPRLKKLAGVPCQVYVRTVAANNAQPLTQDQCLRALHHL
                     RVQSTSKTAPQAK"
BASE COUNT         2806 a         2722 c         2711 g         2546 t
ORIGIN      
        1 ccatcataca ctaaatcagt aagttggcag cattaccagg cgaatggaat aaagaataac
       61 aatgcagaaa atatataaaa gggaatcgca ctataaccca ttaagtaata agccgatggg
      121 ctattggcaa atccaaatac ggaagtaaag atcatcaata tgagtcctat cagactcatc
      181 ttttttatcg tgtgaggcat gaaaccatcc ttcatttcag cgcgtgtata acacgtgccc
      241 actgaactgc actgcgcaac attgagcagg cagcgtaaaa accaatacag aattgatacc
      301 cggatgatat caaatatcca gtcttaaatt gtggccttta acggaaaaat gaaaatatat
      361 gctacagaat ggcgcttatc acgccattct tcgctgttaa ttcagtaatt tttcagaatt
      421 atgcccggtc aacgctaaag gcgatgactt cagccagtgt ctccgcgccc agcgccaaca
      481 tcaccagacg atcaacacct aatgccacgc cggaacagtc aggcataccg actttcaagg
      541 cttcaatcag attctggtca atggggtgct gcggcaaacc gcgcgccgcg cgcttacggt
      601 tatcttgttc aaagcgttgt tgctgctcac gggcatccgt taattcatgg aaaccattcg
      661 ccagctcaat acctttataa taaacctcaa agcgttcagc gacccgatga tcttcggtac
      721 tgatttgcgc cagtgatgcc tggctggctg gaaagtggta cacaaaggtc ggtttttctt
      781 tgccaatatt tggctctacg ccaaaggtaa acagcaattg tagcaacgtg tcgcggtctt
      841 cttcggtatc agcaacgtta ctcaaatcca gtttcgctgc gacttcccgc agttgcgttt
      901 tgtcggcaga gagcgggtca atttccagat aacgcaagaa agcttgttga taagaaaggc
      961 tttctgctgc cgggcagtcc agcacctgtt gtaagagatc gtccacctcg ttcatcaacc
     1021 ggtacatatc atagtgcggt cgataccact caagcatagt gaactcaggg ttgtgataac
     1081 gccccatctc ttcattacgg aagctgcggc acagctggaa taccggccca caaccggcaa
     1141 ccagcaggcg tttcatatgg tattccgggc tggtcattaa ccagagattc atcccctgcg
     1201 aatgcccggg gccaacgaaa cgtgtctcaa acgggaccaa atgaatatcg gttaccgtcg
     1261 cctggctcat acaaggcgtc tccacctcca gcactccacg atcagcaaag aaacgacgga
     1321 tctccgccat aatcgccgcg cgttttaata agttaggaat ggatgcgctc ggctgccagg
     1381 atgccgtttc gctcatagtt aaatctccag tttttgacaa gggcacgaag tctactcgca
     1441 acgcgacggc gagacaaatt ttacgcagga atcaaacagc ggtgggcagt gactaaaaaa
     1501 agcacgatct gatggtttag taattaaatg aatcatcttc agtgataatt tagccctctt
     1561 gcgcactaaa aaaatcgatc tcgtcaaatt tcagacttat ccatcagact atactgttgt
     1621 acctataaag gagcagtgga atagcgttcg cagaccgtaa ctttcaggca cttaccctga
     1681 agtacggggc tgtgggataa aaacaatctg gaggaatgtc gtgcaaacct ttcaagccga
     1741 tcttgccatt gtaggcgccg gtggcgcggg attacgtgct gcaattgctg ccgcgcaagc
     1801 aaatccaaat gcaaaaatcg cactaatctc aaaagtatac ccgatgcgta gccataccgt
     1861 tgctgcagaa gggggctccg ccgctgtcgc gcaggatcat gacagcttcg aatatcactt
     1921 tcacgataca gtagcgggtg gcgactggtt gtgtgagcag gatgtcgtgg attatttcgt
     1981 ccaccactgc ccaaccgaaa tgacccaact ggaactgtgg gggtgcccat ggagccgtcg
     2041 cccggatggt agcgtcaacg tacgtcgctt cggcggcatg aaaatcgagc gcacctggtt
     2101 cgccgccgat aagaccggct tccatatgct gcacacgctg ttccagacct ctctgcaatt
     2161 cccgcagatc cagcgttttg acgaacattt cgtgctggat attctggttg atgatggtca
     2221 tgttcgcggc ctggtagcaa tgaacatgat ggaaggcacg ctggtgcaga tccgtgctaa
     2281 cgcggtcgtt atggctactg gcggtgcggg tcgcgtttat cgttacaaca ccaacggcgg
     2341 catcgttacc ggtgacggta tgggtatggc gctaagccac ggcgttccgc tgcgtgacat
     2401 ggaattcgtt cagtatcacc caaccggtct gccaggttcc ggtatcctga tgaccgaagg
     2461 ctgccgtggt gaaggcggta ttctggtcaa caaaaatggc taccgttatc tgcaagatta
     2521 cggcatgggc ccggaaactc cgctgggcga gccgaaaaac aaatatatgg aactgggtcc
     2581 acgcgacaaa gtttctcagg ccttctggca cgaatggcgt aaaggcaaca ccatctccac
     2641 gccgcgtggc gatgtggttt atctcgactt gcgtcacctc ggcgagaaaa aactgcatga
     2701 acgtctgccg ttcatctgcg aactggcgaa agcgtacgtt ggcgtcgatc cggttaaaga
     2761 accgattccg gtacgtccga ccgcacacta caccatgggc ggtatcgaaa ccgatcagaa
     2821 ctgtgaaacc cgcattaaag gtctgttcgc cgtgggtgaa tgttcctctg ttggtctgca
     2881 cggtgcaaac cgtctgggct ccaactccct ggcggaactg gtggtcttcg gccgtctggc
     2941 cggtgaacaa gcgacagagc gtgcagcaac tgccggtaat ggcaacgaag aggcaattga
     3001 agcgcaggca gctggcgttg aacaacgtct gaaagatctg gttaaccagg atggcggcga
     3061 aaactgggcg aagatccgcg acgaaatggg cctagcaatg gaagaaggtt gcggtatcta
     3121 ccgtacgccg gaactgatgc agaaaaccat cgacaagctg gcagagctgc aggaacgctt
     3181 caagcgcgtg cgcatcaccg acacctccag cgtgttcaac accgacctgc tctacaccat
     3241 tgaactgggc cacggtctga acgttgctga atgtatggcg cactccgcaa tggcacgtaa
     3301 agagtcccgc ggcgcacacc agcgtctgga cgaaggttgc accgagcgtg acgacgtcaa
     3361 cttcctcaaa cacaccctcg ccttccgcga tgctgatggc acgactcgcc tggagtacag
     3421 cgacgtgaag attactacgc tgccgccagc taaacgcgtt tacggtggcg aagcggatgc
     3481 agccgataag gcggaagcag ccaataagaa ggagaaggcg aatggctgag atgaaaaacc
     3541 tgaaaattga ggtggtgcgc tataacccgg aagtcgatac cgcaccgcat agcgcattct
     3601 atgaagtgcc ttatgacgca actacctcat tactggatgc gctgggctac atcaaagaca
     3661 acctggcacc ggacctgagt taccgctggt cctgccgtat ggcgatttgt ggttcctgcg
     3721 gcatgatggt taacaacgtg ccaaaactgg catgtaaaac cttcctgcgt gattacaccg
     3781 acggtatgaa ggttgaagcg ttagctaact tcccgattga acgcgatctg gtggtcgata
     3841 tgacccactt catcgaaagt ctggaagcga tcaaaccgta catcatcggc aactcccgca
     3901 ccgcggatca gggtactaac atccagaccc cggcgcagat ggcaaagtat caccagttct
     3961 ccggttgcat caactgtggt ctgtgctacg ccgcgtgccc gcagtttggc ctgaacccag
     4021 agttcatcgg tccggctgcc attacgctgg cgcatcgtta taacgaagat agccgcgacc
     4081 acggtaagaa ggagcgtatg gcgcagttga acagccagaa cggcgtatgg agctgtactt
     4141 tcgtgggcta ttgctccgaa gtctgcccga aacacgtcga tccggctgcg gccattcagc
     4201 agggcaaagt agaaagttcg aaagactttc ttatcgcgac cctgaaacca cgctaaggag
     4261 tgcaacatga cgactaaacg taaaccgtat gtacggccaa tgacgtccac ctggtggaaa
     4321 aaattgccgt tttatcgctt ttacatgctg cgcgaaggca cggcggttcc ggctgtgtgg
     4381 ttcagcattg aactgatttt cgggctgttt gccctgaaaa atggcccgga agcctgggcg
     4441 ggattcgtcg actttttaca aaacccggtt atcgtgatca ttaacctgat cactctggcg
     4501 gcagctctgc tgcacaccaa aacctggttt gaactggcac cgaaagcggc caatatcatt
     4561 gtaaaagacg aaaaaatggg accagagcca attatcaaaa gtctctgggc ggtaactgtg
     4621 gttgccacca tcgtaatcct gtttgttgcc ctgtactggt aaggagcctg agatgattaa
     4681 tccaaatcca aagcattctg acgaaccggt attctggggc ctcttcgggg ccggtggtat
     4741 gtggagcgca attattgcgc cggtgatgat cctgctggtg ggtattctgc tgccactggg
     4801 gctgtttccg ggtgatgcgc tgagctacga gcgcgttctg gcgttcgcgc agagcttcat
     4861 tggtcgcgta ttcctgttcc tgatgatcgt tctgccgctg tggtgtggtt tacaccgtat
     4921 gcaccacgcg atgcacgatc tgaaaattca cgtgcctgcg ggcaaatggg ttttctacgg
     4981 tctggctgct atcctgacag ttgtcacgct gattggtatc gttacaatct aacgtatcgc
     5041 caatgtaaat ccggcccgcc tatggcgggc cgttttgtat ggaaaccaga ccttatgttc
     5101 aaaacgacgc tctgcgcctt attaattacc gcctcttgct ccacatttgc tgcccctcaa
     5161 caaatcaacg atattgtgca tcgcacaatt accccgctta tagagcaaca aaagatcccc
     5221 ggtatggcgg tggcggtaat ttatcagggt aaaccttatt actttacctg gggctatgcg
     5281 gacatcgcca aaaagcagcc cgtcacacag caaacgttgt ttgagttagg ttcggtcagc
     5341 aaaacattta cgggcgtgct tggtggcgac gctattgctc gaggggaaat caagttaagc
     5401 gatcccgcaa caaaatactg gcctgaactt accgctaaac agtggaatgg gatcacacta
     5461 ttacatcttg cgacctacac cgctggcggc ctgccattgc agatgccgga tgaagtgaaa
     5521 tcctcaagcg acttgctgcg cttctatcaa aactggcagc ctgcatgggc tccaggaaca
     5581 caacgtctgt atgccaactc cagtatcggt ttgttcggcg cactggctgt gaagccgtct
     5641 ggtttgagtt ttgagcaggc gatgcaaact cgtgtcttcc agccactcaa actcaaccat
     5701 acgtggatta atgtaccgcc cgcagaagaa aagaattacg cctggggata tcgcgaaggc
     5761 aaggcagttc atgtttcgcc aggggcgtta gatgctgaag cttatggtgt gaagtcgacc
     5821 attgaagata tggcccgctg ggtgcaaagc aatttaaccc cccttgatat caatgagaaa
     5881 acgcttcaac aagggataca actggcacaa tctcgctact ggcaaatcgg cgatatgtat
     5941 cagggcctgg gctgggaaat gctggactgg ccggtcaatc ctgacagcat cattaacggc
     6001 agtgacaata aaattgcact ggcagcacgc ccggtaaaag cgattaagcc cccaactcct
     6061 gcagtacgcg catcatgggt acataaaacg ggggcgaccg gcggatttgg tagctatgtc
     6121 gcgtttattc cagaaaaaga gctgggtatc gtgatgctgg ctaacaaaaa ctatcccaat
     6181 ccagcgagag tcgccgccgc ctgtcagatt ctcaacgctc tacagtaaaa tttcatcggg
     6241 tccgaatttt cggacctttt ctgcgctttt ccttgctgtc atctacactt agaaaaaaac
     6301 cagtaaggaa acatttatgc gcctgctccc tctcgttgcc gcagcgacag ctgcatttct
     6361 ggtcgttgcc tgcagttctc ctacgccgcc gcgtggcgtg acagtagtga ataatttcga
     6421 cgctaaacgc tatctcggta cctggtatga gattgcccgt tttgatcacc gttttgaacg
     6481 tggactggaa aaagtcaccg caacatacag tctgcgtgat ggcggcggcc tgaatgtcat
     6541 caataaaggc tataaccctg acagagaaat gtggcagcag agtgaaggga aagcgtactt
     6601 taccggcgca ccaacacgcg ctgcgctgaa agtgtcattc tttggtcctt tctatggcgg
     6661 ttataacgtc attgcacttg atcgggaata ccgccatgcg ctggtttgcg gcccggaccg
     6721 cgactacctg tggatactct cccgcacgcc aaccatttct gacgaagtga aacaggagat
     6781 gctggcagtc gcgacccggg aagggtttga tgtcagtaag tttatttggg tacagcagcc
     6841 cggtagttag tgagtgctga gtttcagacc aataatcccc aatacgatta acgccagact
     6901 cgccaggcgc atcgggttag cggactcacc gagcagcaca atgccggtga tagccgcgcc
     6961 gactgcgcca atacccgtcc acacggcata agccgtccct actggtaacg atttcatcgc
     7021 ccaggcaagt agcgccatac tgacaatcat cgccgtcacg gtaataacac tcggcgtcaa
     7081 acgactaaag ccgtgggtat atttcaggcc aacggcccat accacttcca gcagaccagc
     7141 aataactaag ataatccagg acatatcagg ctccggagaa ttggggccgt ccccggtgaa
     7201 aagacgcgtt tgcaggtcgt cctgcaaagc tgatggttga acggatattt tgccaggtgg
     7261 caggggaatt tcaactatta ccttagtgac tatcgcagaa aaaacaaacg gcacgacaca
     7321 gctgtcgtac cgttattgct tattgctatt gctgcgcttt cgttgctgcg ccagaaatcg
     7381 cgttaccgcc atcagaaatg tcttcaccaa cgccacgcgt ggtgttgcag gcagttaata
     7441 ctgttgaaag caccagaaca gaaaagatcg ctgcaattgt cttcttcacc ataacgtctt
     7501 ccttttaggt aatgttattt atgtttgcct atagcaaatt aataatagac aacatcgcca
     7561 aaaatgacgg aaatctgatg atttttcgga agagaagaaa aattagctgg cagcgcgaga
     7621 gatggagttg ccgagatgtt tgatgtcttc gccgaaaccg cgagcggtgt tacagcccgt
     7681 gagcagcgta ctagcaagca aaacaagaac gataaggcgt ttcatcatct ctgacctgaa
     7741 taagtgatgg tgcagcctgc aggccgcacc acaaccgcat tacttcacgc gagagacgta
     7801 ttcaccagag cgggtatcca ctttgatgac ttcgccgatt tgtacgaaca gcggaacctt
     7861 aaccacagcg ccagtagaca gggtagccgg tttgccgcca gtacctgcgg tatcaccttt
     7921 caggcccgga tcggtatcaa cgatttccag ttcaacgaag ttcggcggag taacggagat
     7981 cggctgacca ttccacagag ttacgataca ctctgcctga tccagcagcc atttagcgtt
     8041 atcgccaatt gcttttgcat cagcagacag ctgctcgaaa gtttcgttgt tcatgaagtg
     8101 ccagaactca ccgtcgttgt acaggtaagt caggttcata tcgacaacat cagcgccttc
     8161 agcggaatca gtagatttga aggttttttc tacgcgagta ccggtcagca gacgacgcag
     8221 tttaacgcga gcaaatgcct ggcctttacc cggttttacg aattcactcg cttcaaccgc
     8281 gtaaggttcg ccgtctaaca tgattttaag accagcacga aaatcgttgc tatagtacgt
     8341 tgccataagg ccctctgaaa tttgttaatt ggtagctaag ccacaaaatg gcacatattg
     8401 taaccctaaa taccccatcc agagaagatt ggttaacgca acttgccgat gttgtgaccg
     8461 atcctgatga acttctgcgt cttttgaata tagacgcgga cgaaaaactg ttggccggac
     8521 gcagcgccaa aaagctgttt gccctgcgtg tgccccgctc atttatcgat cgcatggaga
     8581 aaggcaatcc ggacgatcct cttttgcgtc aggtacttac ctcgcaagat gagtttgtcg
     8641 tcgcgtccgg attctccacc gacccactgg aagaacagca cagcgtagtg cctggtttgt
     8701 tgcataaata ccacaaccgg gcgcttttgc tggtcaaagg cggctgcgcg gtaaattgcc
     8761 gctattgctt ccgtcgccac ttcccctatg ccgaaaatca gggcaacaag cgtaactggc
     8821 agactgcact tgagtatgtt gctgcgcatc cggaactgga cgagatgatt ttctccggcg
     8881 gcgatccgct gatggcgaaa gatcacgagc tggactggtt gctcacacaa ctggaagcca
     8941 tcccgcatat caaacgtctg cggattcaca gccgtctgcc gattgtgatc ccggcacgca
     9001 tcacagatgc gctggttgaa cgcttttcac attctacgct gcaaatcctg ctggtgaatc
     9061 acatcaacca tgccaatgag atagatgaaa cattccgtca ggcgatggct aagttgcgcc
     9121 gggtaggcgt tactttgctg aaccagagcg ttctgttacg tgatgtgaac gataacgcac
     9181 aaacgctggc aaacctgagt aatgcgttgt tcgatgccgg cgtgatgccg tattacctgc
     9241 atgtgctcga taaagtacag ggcgcggcgc attttatggt gagtgatgac gaagcacggc
     9301 agattatgcg tgagttgctg acattggtgt cgggatatct ggtgccgaaa ctggcgcgag
     9361 aaattggcgg cgaacccagc aaaacgccgc tggatctcca gctacgccag cagttactga
     9421 ttaaacaggg aagttaaaca ttaaaattgc ctgatgcgct acgcttatca ggcctacatc
     9481 gtgcattgaa attgaatgga tttgcaatga actgtaggcc ggataaggcg tttacgccgc
     9541 atccggcaag agcaacaaac gcaagtacag caacctgtca ttaaactgag aaatttaatc
     9601 tttgcccgtt gcataacctt taattattca tatgcattgc tgttgttact ttttatatag
     9661 ctaacaccaa taattaacct ttcttttctg tttatataga gtgagcacgg ctatttatgt
     9721 tattttaaca actattacta ccaagcccat ttatctggct tataaattaa aattaattat
     9781 ttaattgaga aatggttagg gagaacctac atggccataa gcatcaaggg tgttaatacc
     9841 ggtgttattc gcaagagtaa taatttcatt gcactggcgc tgaaaattaa agaacctcgc
     9901 aataaagaat cgttgttctt tatgtctgtc atggaactgc gcgacctgct gattgcgctg
     9961 gaaagtcgtc tgcatcaaaa gcataaactg gatgctgctg cacgccttca gtatgagcaa
    10021 gctcgcgata aagtcattaa gaaaatggca gaaaacatcc cagaaattct ggttgatgag
    10081 cttaaaaatg ccgatattaa tcgtcgggtt aacacgctgg aacttaccga taatcaaggc
    10141 gaaaatctta ccttcgtatt aacgctacat gacggtagca aatgtgagtt agtcgtcaat
    10201 gagttgcaga ttgaaatgct agcgcgagca atcattcatg caattaataa tgcggaaatg
    10261 cgtgaactgg cattacgtat tacctcactg ttagatttcc tgccgttata tgacgttgac
    10321 tgccaggaaa atggcaatct ggaatatgac acctattccc aaccggaatg gaaacataac
    10381 ttgttcgacc attatctggc ggtgctttac cgctttaaag atgaaagtgg caaagaacaa
    10441 tttagcggcg cagtggtgaa aacgcgtgaa gcaacgccgg gtaaagaagt agaggcgatc
    10501 actcgccgaa tgcttgattt cagcccacga ctgaaaaaac tcgcgggtgt gccatgtcag
    10561 gtctatgttc gcaccgtagc ggcgaataac gcccaaccgc taacccagga tcaatgctta
    10621 cgcgcgctgc atcacttacg tgttcaatcc accagcaaaa ctgcaccaca ggcgaaataa
    10681 tctcatcttt gctaatgcga ggctggagcc atccagcctg aaatgactga taacgtgatc
    10741 gttggtcatg ccggatgcgg cgtaaacgcc ttatccggcc tacaa
//
LOCUS       DADMHC010000436         9733 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H114160392
            SAMEA1570837-rid11410783.guided.153, whole genome shotgun sequence.
ACCESSION   DADMHC010000436 DADMHC010000000
VERSION     DADMHC010000436.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570837
            Sequence Read Archive: ERR205901
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941129.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941129.1
            Genome Coverage       :: 313x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 06:01:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,282
            CDSs (total)                      :: 4,203
            Genes (coding)                    :: 3,866
            CDSs (with protein)               :: 3,866
            Genes (RNA)                       :: 79
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 181 of 337
            Pseudo Genes (incomplete)         :: 84 of 337
            Pseudo Genes (internal stop)      :: 106 of 337
            Pseudo Genes (multiple problems)  :: 33 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9733
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570837-rid11410783.guided.153"
                     /strain="H114160392"
                     /db_xref="taxon:621"
     gene            1..630
                     /locus_tag="JNZ57_004272"
                     /pseudo
     CDS             1..630
                     /locus_tag="JNZ57_004272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706235.2"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="RNA ligase RtcB family protein"
     gene            627..1241
                     /locus_tag="JNZ57_004273"
     CDS             627..1241
                     /locus_tag="JNZ57_004273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000602105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor H"
                     /protein_id="HAY8830219.1"
                     /translation="MILLQLSSAEGPEECCLAVKKALDRLIKEAARQDVAVTVLETET
                     GRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADE
                     QEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLL
                     IAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAFIEG"
     gene            complement(1298..2755)
                     /gene="pepD"
                     /locus_tag="JNZ57_004274"
     CDS             complement(1298..2755)
                     /gene="pepD"
                     /locus_tag="JNZ57_004274"
                     /EC_number="3.4.13.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008783788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosol nonspecific dipeptidase"
                     /protein_id="HAY8830220.1"
                     /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKG
                     FHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDG
                     EWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWL
                     QADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGG
                     EIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDAL
                     KSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN
                     SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA
                     KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIG
                     PTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK"
     gene            3016..3474
                     /gene="gpt"
                     /locus_tag="JNZ57_004275"
     CDS             3016..3474
                     /gene="gpt"
                     /locus_tag="JNZ57_004275"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HAY8830221.1"
                     /translation="MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA
                     LLARELGIRHVDTVCISSYDHDNQRELKVLKCAEGDGEGFIVIDDLVDTGGTAVAIRE
                     MYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR"
     gene            3566..4810
                     /gene="frsA"
                     /locus_tag="JNZ57_004276"
     CDS             3566..4810
                     /gene="frsA"
                     /locus_tag="JNZ57_004276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase FrsA"
                     /protein_id="HAY8830222.1"
                     /translation="MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTI
                     PHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWA
                     TQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEA
                     AQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYF
                     APRGIVMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGA
                     NVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEA
                     LRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFN
                     PVYRNFDKGLQEITGWIEKRLC"
     gene            4868..5269
                     /locus_tag="JNZ57_004277"
     CDS             4868..5269
                     /locus_tag="JNZ57_004277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor-binding protein Crl"
                     /protein_id="HAY8830223.1"
                     /translation="MTLPSGHPKSRLIKKFTALGPYIREGKCEDNRFFFDCLAVCVNV
                     KPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLRE
                     FHEKLRELLTTLNLKLEPADDFRDEPVKLTA"
     gene            complement(5308..6363)
                     /gene="phoE"
                     /locus_tag="JNZ57_004278"
     CDS             complement(5308..6363)
                     /gene="phoE"
                     /locus_tag="JNZ57_004278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoporin PhoE"
                     /protein_id="HAY8830224.1"
                     /translation="MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYM
                     SDNDSKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGL
                     KYKDLGSFDYGRKLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFF
                     GVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQN
                     LQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQF
                     DFGLRPSLGYVLSKGKDIEGIGGEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNK
                     LNINNDDIVAIGMTYQF"
     gene            6651..7754
                     /gene="proB"
                     /locus_tag="JNZ57_004279"
     CDS             6651..7754
                     /gene="proB"
                     /locus_tag="JNZ57_004279"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HAY8830225.1"
                     /translation="MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHR
                     IVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQML
                     LTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILA
                     GADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKL
                     QAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAG
                     EITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDA
                     LRRIAGHHSQEIDAILGYEYGPVAVHRDDMITR"
     gene            7766..9019
                     /gene="proA"
                     /locus_tag="JNZ57_004280"
     CDS             7766..9019
                     /gene="proA"
                     /locus_tag="JNZ57_004280"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HAY8830226.1"
                     /translation="MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILN
                     ANAQDVADARANGLSEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSG
                     LRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQ
                     DALKSCGLPAGAVQAIDNPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVI
                     TGGIGVCHIYVDESVEIAEALKVIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQ
                     MAESGVTLHADAAALAQLQAGPAKVVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIR
                     EHGTQHSDAILTCDMRNAQRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLH
                     ARGPMGLEALTTYKWIGIGDYTIRA"
     gene            9134..9209
                     /locus_tag="JNZ57_004281"
     tRNA            9134..9209
                     /locus_tag="JNZ57_004281"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9167..9169,aa:Thr,seq:cgt)
     gene            complement(9224..>9733)
                     /locus_tag="JNZ57_004282"
     CDS             complement(9224..>9733)
                     /locus_tag="JNZ57_004282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage integrase family protein"
                     /protein_id="HAY8830227.1"
                     /translation="EQMVVSAIASTPHRVAWINPEESKSNRAIGVALNDTACRVLKKQ
                     IGNHHRWVFVYKESCTKPDGTKAPTVRKMRYDANTAWKAALRRAGIDDFRFHDLRHTW
                     ASWLVQAGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEHARQIDSILNPSVPNLSQS
                     RNKERTNDV"
BASE COUNT         2355 a         2403 c         2558 g         2417 t
ORIGIN      
        1 acaccccatt ataaggggta cgaataaagt aacggggcag tctattttac agcggcatat
       61 tgcctcgttc tcgcatcatg gtttgcctca aggcagtgac gacgcgctac ggtatattgc
      121 ggaacatgac gatgcgctgg cgtttgcgtg tattaatcgc cagatgatcg ctttgcgcat
      181 aatgcaacaa gttaaggcca cgggaagtcc ggttctggat gtggcgcata actttgttag
      241 cgcgtgtcaa atcggcgatc aacagggctg gttgcatcgt aaaggtgcca cgccggatga
      301 caacggtctg gtgattactc ctggattgta cagcctgttg cgaacgaaaa aacgctccac
      361 tcgctggcgc atggggcagg gcgtaaatgg gggcgcaccg agtgtaaatg gcgtctggca
      421 gcgaaataca cggtgacgca actctcgcgg actgaacttg gcagtcggat aatttgtcgc
      481 gataaacaac tcatctttga agaagcgcca caagcctata aatcggctga aagcgtggtg
      541 caatgtctgg tgcaggccgg tttaattatt cctgtcgcgc ggctgcgtcc ggtgctaacg
      601 ctcaaaaaca gtggagggaa aaaaggatga tcttgctaca actctcctca gcggaggggc
      661 cggaagaatg ttgtctcgca gtgaaaaagg cgctggacag gctaattaaa gaagctgccc
      721 gacaagacgt cgcggtaacg gtgttggaaa cagaaacggg ccgctactct gacacgctgc
      781 gttcagctct ggtttctctg gatggcgata acgcatgggc attaagcgaa agctggtgtg
      841 gcactattca gtggatttgt ccgagtccgt atcggcctca tcatgggcgc aaaaactggt
      901 ttctgggcat tgggcgtttt accgctgatg agcaggagca atccgatgcg atccggtatg
      961 agacgctgcg ttcgtcgggg ccgggcggtc aacatgtcaa taaaaccgac tcggcggtac
     1021 gcgccacgca tttggcatcc ggtattagcg tgaaggttca gtcagagcgt agtcagcatg
     1081 ctaacaagcg gctggcacga ttgctgattg cctggaagct ggagcagcag caacaggaaa
     1141 atagcgcggt gctgaaatcg cagcggcgaa tgttccatca ccagattgaa cgtggcaacc
     1201 cgagacggac atttacaggg atggctttta tcgaaggata atgaaggatg aaactgccgg
     1261 aaggcgatta aacgccatcc ggcagcaaat caaataatta cttcgccgga atttctttca
     1321 gcagttcagt cagcagtgtc cagtaatgac ctacgctttc gatgtgaact tgctcatccg
     1381 gagagtgtgg accggtgata gttggcccga tagaaaccat gtccatttcc ggatacggtt
     1441 ttttgaacag accacattcc aggcccgcgt ggataatctg gatgttcggc gtcttgttga
     1501 acaggcgctg ataggtttca cgtaccagat gcatcaccgg agaattagcg tccggctgcc
     1561 agccaggata tgcgcctttc gcttcggttt tcgcgccagc cagtttaccc agcgaatcca
     1621 gcatgctcac cacgtagtct ttaccgctgt cgatcagtga acggatcagg cagtgaattt
     1681 ctacgttatt gtcagtcatg gtcaccacac cgacgttcag ggaggtttca accacacctt
     1741 tggctacatc ggagttgcgg atcacaccgt tcggggtggc gttcagcaga cgaataaagg
     1801 tatcgcgaga tttcgcaatc agggcagctt tatcgttcgc tacagagtcc agcaacaagg
     1861 ccagattttt ctctttctct gccagctcgt ttttcaggat ctcctgatag gtattcacca
     1921 gagatttcag tgcgtcgact ttatcagctg cgacagcaat ggtcgcaaag gcttcacgcg
     1981 ggatggcgtt acgcagtgtg ccgccgttga aatcgataag gcgcaggtcc agttcttctg
     2041 catgacccgc caggaagcgc accagcagtt tgttggcatt acccaggcca acgtggattt
     2101 caccgccgga gtgaccgcct ttcagacctt ttaaggttaa cttgaaggtt tcaaaaccag
     2161 ctggaaccgc ttcacgatct aaatgcaggt tggaggtgaa gtcgataccc cccgcacaac
     2221 ccatgtagat ttcaccttct tcttcggagt cggtgttaat cagaatatca gcctgcaacc
     2281 agttgctctg taagccaaaa gcaccgtcca taccggcttc ttcggtcatg gtcagcagca
     2341 cttccagcgg accgtgaacc acgttttcgt cagccagaac cgccagtgca gaggccatac
     2401 caatgccgtt atccgcaccc agcgtggtgc cgcgcgcttt aacccattcg ccatcaatat
     2461 aaggctggat aggatctttc gtgaagtcat gcacggtgtc gttatttttc tgcggcacca
     2521 tatcgaggtg ggcctgtaag acgaccggtt tacgattttc catacctgcg gtagcaggtt
     2581 tacgaatcag gatattacct acctgatcgc gttcgacatg gaaacctttc tcttttgccc
     2641 aaccaacaat gtattcagcg agttgctctt catgatagga cgggtgagga atagaacaga
     2701 ttttggcaaa aatatcccac agcggctgtg gagataattg agacagttca gacacgttaa
     2761 gtctccttgt cgatcacccg caaaacagta ttgcaggtca cagggttagc agaaaatgtt
     2821 gtcaacacaa gacaggcttg cgagatatgt ttgagaatac cactttatcc cgcgtcaggg
     2881 agaggcagtg cgtaaaaaga cgcggactca tgtgaaatac tggtttttag tgcgccagat
     2941 ctctataatc tcgcgcaacc tattttcccc tcgaacactt tttaagccgt agataaacag
     3001 gctgggacac ttcacatgag cgaaaaatac atcgtcacct gggacatgtt gcagatccat
     3061 gcacgtaaac tcgcaagccg actgatgcct tctgaacaat ggaaaggcat tattgccgta
     3121 agccgtggcg gtctggtacc gggtgcgtta ctggcgcgtg aactgggtat tcgtcatgtc
     3181 gataccgttt gtatttccag ctacgatcac gacaaccagc gagagcttaa agtgctgaaa
     3241 tgcgcagaag gcgatggcga aggcttcata gttattgatg acctggtgga taccggtggt
     3301 actgctgttg cgattcgtga aatgtatcca aaagcgcact ttgtcaccat cttcgcaaaa
     3361 ccggctggtc gtccgctggt tgatgactat gttgttgata ttccgcaaga tacctggatc
     3421 gaacagccgt gggatatggg cgtcgtattc gtcccgccaa tctccggtcg ctaatctttt
     3481 caacgcctgg cactgccggg cgttgttctt tttaacttca ggcaggttac aatagtttcc
     3541 agtaagtatt ctggaggctg catccatgac acaggcaaac ctgagcgaaa ccctgttcaa
     3601 accccgcttt aaacatcctg aaacctcgac gctagtccgc cgctttaatc acggcgcaca
     3661 accgcctgtg cagtcggctc ttgatggtaa aaccatccct cactggtatc gcatgattaa
     3721 ccgtctgatg tggatctggc gcggtattga cccacgtgaa atcctcgacg tccaggcacg
     3781 tattgtgatg agcgatgctg aacgtaccga cgatgattta tacgatactg tgattggcta
     3841 ccgtggtggc aactggattt atgagtgggc cacccaggcg atggtgtggc aacaaaaagc
     3901 ctgtgcggaa gaagatccgc aactcagtgg tcgacactgg ctgcatgcgg ctacgttgta
     3961 caacattgcc gcctatcctc atctgaaagg agatgacctg gccgagcaag cgcaggcttt
     4021 atcaaaccgc gcctatgaag aggccgccca gcgtctgccg ggcacgatgc ggcagatgga
     4081 gtttaccgta cccggcggtg cgcccatcac cggctttttg catatgccga aaggcgatgg
     4141 cccgttcccg acagtattaa tgtgtggtgg tctggatgcg atgcagacgg actattacag
     4201 cctgtatgaa cgttattttg cgccgcgcgg cattgtgatg ctgactattg atatgccgtc
     4261 ggtgggcttt tcttcaaaat ggaagctcac ccaggactcc agcctgttgc atcagcacgt
     4321 cttaaaggcg ctgcctaacg taccgtgggt ggatcacact cgcgtcgcgg cctttggttt
     4381 ccgtttcggc gctaacgttg ccgtgcgtct ggcatatctt gaatcgccgc gtctgaaagc
     4441 ggttgcctgt cttggtccgg tagttcatac cctgttgagt gattttaagt gccagcaaca
     4501 ggtgccggaa atgtatcttg acgttctggc gagtcgtttg gggatgcatg atgcttccga
     4561 cgaagcgtta cgcgtggagc tgaatcgcta ttcattaaaa gtgcaaggat tgctgggacg
     4621 tcgctgccca acgccaatgt tatcaggcta ctggaagaac gatccgttca gcccggaaga
     4681 ggactcacgc ttaatcacct catcatctgc tgacggtaaa ttattagaga tcccatttaa
     4741 cccggtgtat cggaattttg acaaaggtct tcaggaaatc accggctgga tcgaaaaacg
     4801 cttgtgttaa aaatttgcta aattttgcca atttggtaaa acagttgcat cacaacagga
     4861 gatagcaatg acgttaccga gtggacaccc gaagagcaga ttgatcaaaa aatttaccgc
     4921 actaggcccg tatattcgtg aaggtaagtg cgaagataat cgattctttt tcgattgtct
     4981 ggctgtatgc gtcaacgtga aaccggcacc ggaagtgcgt gaattctggg gctggtggat
     5041 ggagctggaa gcgcaggaat cccgttttac ctacagctac cagtttggtc tgttcgataa
     5101 agcaggcgac tggaagagtg ttcctgtaaa agatactgaa gtggttgaac gactggagca
     5161 caccctgcgt gagtttcacg agaagctgcg tgaactgctg acgacgctga atctgaagct
     5221 ggaaccggcg gatgattttc gtgacgagcc ggtgaagtta acggcgtgag tgaaatgtgc
     5281 cggatgcatc acatccggca atatctatta aaactgatac gtcatcccaa tcgcgacaat
     5341 atcatcatta ttaatattca atttgttatc gctatccagt tggttgattt tataatcaac
     5401 aaatgctgac atatttttgt tgaaataata cgtagcaccg acgtcgatat aattaaccag
     5461 atcttcacca ccgatgccct caatatcttt ccctttcgat aagacataac ccagcgatgg
     5521 acgcagacca aagtcaaact ggtattgagc gaccgcttca aagttctgtg tcttattggc
     5581 aaagccgcca gttattggcg tcattttgcg agtttcagaa tagaaagttg ccagataaat
     5641 attattggca tcgtatttca gacctgttgc ccatgcttct gcacgcttgc ctgtgccacg
     5701 gctttgcagg ttctgctcgt tggtgcgatc tgagttggta taggccccac taatggcgaa
     5761 atcgctgccg ccaaagtcat atgtcaatga cgtgccgaag ccatcgccgt tttgcttttt
     5821 aacgtcgcgg ttttcgtttt tcccttgata ttgcagggtt aagttcaggc catcgataac
     5881 gccgaagaag tcggtgttcc gatacgtcgc cagaccgctg gcgcgtttgg tcataaagtt
     5941 gtcggtctgc gccgaggagt cgccaccaaa ttccgggaac atatcggtcc aggcttccac
     6001 gtcatacaac gcgcccagct tacgaccata atcgaaagaa cccaaatctt tatatttcaa
     6061 cccggcaaaa gcgagacgcg ttttttgctg tgcagtatca ctctctgctt tattaccggc
     6121 aaactctgct tcccaacgac cataaccagt cagttgatcg ttaatttgtg tttcgccttt
     6181 aaaaccaaaa cggatataac tctggtcgcc atctttactg tcgttatcac tcatataatg
     6241 catggcttta actttgccat agacatccag tttattaccg tctttgttat atatttctgc
     6301 ggcctgtacg gatgcagatg ccacaatgcc catcaccact aatgccagag tgctcttttt
     6361 cattttcatt cctgatttta attaacgcgc gaatattcag cgggagagcc ccgttgaaaa
     6421 caggaaagtt tttaacctga gattgttaaa gatatattac agattaataa tattcttaaa
     6481 atgtggtaat ttattaaatc tgtaataaaa gcgtaaacaa ctgccgctag gcttgctgat
     6541 cccgcgcaac aaaacgccat gctttgctcg cagatggttg gcaaccgacg acagtcctgc
     6601 taaaacgttc gtttgatatc atttttccta aaattgaatg gcagagaatc atgagtgaca
     6661 gccagacgct ggtggtaaaa ctcggcacca gtgtgctaac aggcggatcg cgccgtctga
     6721 accgtgccca tatcgttgaa cttgttcgcc agtgcgcgca gttacatgcc gccgggcatc
     6781 ggattgttat tgtgacgtcg ggcgcgatcg ccgccggacg tgagcacctg ggttacccgg
     6841 aactgccagc gactatcgcc tcgaaacaac tgctggcagc ggtagggcag agtcgactga
     6901 ttcaactgtg ggaacagctg ttttcgattt atggcattca cgtcgggcaa atgctgctga
     6961 cccgtgctga tatggaagac cgtgaacgct tcctgaacgc ccgcgacacc ctgcgtgcgt
     7021 tgctcgataa caatatcgtt ccggtaatca atgagaacga tgctgtcgct acggcagaga
     7081 ttaaagtcgg cgataacgat aacctttctg cgctggcggc gattctggcg ggtgccgata
     7141 aactgttgct gctgaccgat caaaaaggtt tgtataccgc tgacccgcgc agcaatccgc
     7201 aggcagaact gattaaagat gtttacggca ttgatgacgc actgcgcgcg attgccggtg
     7261 acagcgtttc aggcctcgga actggcggca tgagtaccaa attgcaggcc gctgacgtgg
     7321 cttgccgtgc gggtatcgac accattattg ccgcgggcag caagccgggc gttattggtg
     7381 atgtgatgga aggcatttcc gtcggtacgc tgttccatgc ccaggcgact ccgcttgaaa
     7441 accgtaaacg ctggattttc ggtgcgccgc cggcgggtga aatcacggta gatgaagggg
     7501 caactgccgc cattctggaa cgcggcagct ccctgttgcc gaaaggcatt aaaagcgtga
     7561 ctggcaattt ctcgcgtggt gaagtcatcc gcatttgcaa cctcgaaggt cgcgatatcg
     7621 cccacggtgt cagtcgttac aacagcgatg cattacgccg tattgccgga caccactcgc
     7681 aagaaattga tgcaatactg ggatatgaat acggcccggt tgccgttcac cgtgatgaca
     7741 tgattacccg ttaaggagct ggccgatgct ggaacaaatg ggcattgccg cgaagcaagc
     7801 ctcgtataaa ttagcgcaac tctccagccg cgaaaaaaat cgcgtgctgg aaaaaatcgc
     7861 cgatgaactg gaagcacaaa gcgaaatcat cctcaacgct aacgcccagg atgttgctga
     7921 cgcgcgagcc aatggcctta gcgaagcgat gcttgaccgt ctggcactga cgcccgcacg
     7981 gctgaaaggc attgccgacg atgtacgtca ggtgtgcaac ctcgccgatc cggtggggca
     8041 ggtaatcgat ggcggcgtac tggacagcgg cctgcgtctt gagcgtcgtc gcgtaccgct
     8101 gggggttatt ggcgtgattt atgaagcgcg cccgaacgtg acggttgatg tcgcttcgct
     8161 gtgcctgaaa accggtaatg cggtgatcct gcgcggtggc aaagaaacgt gtcgcactaa
     8221 cgctgcaacg gtggcggtga ttcaggacgc cctgaaatcc tgcggcttac cggcgggtgc
     8281 cgtgcaggcg attgataatc ctgaccgtgc gctggtcagt gaaatgctgc gtatggataa
     8341 atacatcgac atgctgatcc cgcgtggtgg cgctggtttg cataaactgt gccgtgaaca
     8401 gtcgacaatc ccggtgatca caggtggtat aggcgtatgc catatttacg ttgatgaaag
     8461 tgtagagatc gctgaagcat taaaagtgat cgtcaacgcg aaaactcagc gtccgagcac
     8521 atgtaatacg gttgaaacgt tgctggtgaa taaaaacatc gccgatagct tcctgcccgc
     8581 attaagcaaa caaatggcgg aaagcggcgt gacattacac gcagatgcag ctgcactggc
     8641 gcagttgcag gcaggccctg cgaaggtggt tgctgttaaa gccgaagagt atgacgatga
     8701 gtttctgtca ttagatttga acgtcaaaat cgtcagcgat cttgacgatg ccatcgccca
     8761 tattcgtgaa cacggcacac aacactccga tgcgatcctg acctgcgata tgcgcaacgc
     8821 ccagcgtttt gttaacgaag tggattcgtc cgctgtttac gttaacgcct ctacgcgttt
     8881 taccgacggc ggccagtttg gtctgggtgc ggaagtggcg gtaagcacac aaaaactcca
     8941 cgcgcgtggc ccaatggggc tggaagcact gaccacttac aagtggatcg gcattggtga
     9001 ttacaccatt cgtgcgtaaa taaaaccggg tgatgcaaaa gtagccattt gattcacaag
     9061 gccattgacg catcgcccgg ttagttttaa ccttgtccac cgtgattcac gttcgtgaac
     9121 atgtcctttc agggccgata tagctcagtt ggtagagcag cgcattcgta atgcgaaggt
     9181 cgtaggttcg actcctatta tcggcaccat ttaaatcaat aagttacaca tcattagtac
     9241 gttccttatt tcttgactgg gacaaatttg ggaccgatgg gttcagaatc gagtctattt
     9301 gccgtgcgtg ttcggtaagg tgattaggtg cgaggtgagc atatcgacga accatttcga
     9361 tagactccca gcctcccatt tcctgtaaca ctgataacgg gactccggcc tgaaccagcc
     9421 aacttgccca ggtgtgtctc aagtcgtgaa atctgaaatc atcaatacct gctcgtctca
     9481 gcgccgcttt ccaggctgtg tttgcgtcat accgcatctt cctgactgtt ggcgctttcg
     9541 ttccgtctgg tttggtacag ctttccttat acacaaatac ccaacggtga tgattcccga
     9601 tttgtttttt caatacgcga catgcagtat cattcagcgc aacgccaatt gcgcggtttg
     9661 atttactctc ttccgggttt atccatgcca cccggtgagg tgtactggca atagcggaca
     9721 ctaccatttg ttc
//
